BV404_RS11360 c73ac8f8088e6378dd2bccda1ee7f3f2 310 SUPERFAMILY SSF46785 6 87 8.17E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS11360 c73ac8f8088e6378dd2bccda1ee7f3f2 310 SUPERFAMILY SSF53850 95 295 5.43E-34 T 09-03-2017 BV404_RS11360 c73ac8f8088e6378dd2bccda1ee7f3f2 310 Gene3D G3DSA:3.40.190.10 178 257 1.5E-9 T 09-03-2017 BV404_RS11360 c73ac8f8088e6378dd2bccda1ee7f3f2 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 66 3.6E-18 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS11360 c73ac8f8088e6378dd2bccda1ee7f3f2 310 Gene3D G3DSA:1.10.10.10 8 83 5.4E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS11360 c73ac8f8088e6378dd2bccda1ee7f3f2 310 Gene3D G3DSA:3.40.190.10 95 177 2.6E-30 T 09-03-2017 BV404_RS11360 c73ac8f8088e6378dd2bccda1ee7f3f2 310 Pfam PF03466 LysR substrate binding domain 93 290 2.0E-27 T 09-03-2017 IPR005119 LysR, substrate-binding BV404_RS11360 c73ac8f8088e6378dd2bccda1ee7f3f2 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 4.0E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS11360 c73ac8f8088e6378dd2bccda1ee7f3f2 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 4.0E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS11360 c73ac8f8088e6378dd2bccda1ee7f3f2 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 4.0E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS10390 dab703ddd2172f414e7ed6b5f1163bd7 413 Pfam PF00534 Glycosyl transferases group 1 212 378 4.3E-10 T 09-03-2017 IPR001296 Glycosyl transferase, family 1 BV404_RS10390 dab703ddd2172f414e7ed6b5f1163bd7 413 SUPERFAMILY SSF53756 5 400 1.94E-32 T 09-03-2017 BV404_RS04715 fb738231c1f844d70b20a2d880e1d4f2 339 Pfam PF14842 FliG N-terminal domain 11 109 6.9E-23 T 09-03-2017 IPR028263 Flagellar motor switch protein FliG, N-terminal domain BV404_RS04715 fb738231c1f844d70b20a2d880e1d4f2 339 Pfam PF14841 FliG middle domain 123 194 5.5E-21 T 09-03-2017 IPR032779 Flagellar motor switch protein FliG, middle domain BV404_RS04715 fb738231c1f844d70b20a2d880e1d4f2 339 Gene3D G3DSA:1.10.220.30 240 335 2.0E-25 T 09-03-2017 IPR011002 Flagellar motor switch protein FliG, alpha-helical BV404_RS04715 fb738231c1f844d70b20a2d880e1d4f2 339 Pfam PF01706 FliG C-terminal domain 224 330 1.3E-25 T 09-03-2017 IPR023087 Flagellar motor switch protein FliG, C-terminal BV404_RS04715 fb738231c1f844d70b20a2d880e1d4f2 339 SUPERFAMILY SSF48029 12 114 1.18E-18 T 09-03-2017 IPR011002 Flagellar motor switch protein FliG, alpha-helical BV404_RS04715 fb738231c1f844d70b20a2d880e1d4f2 339 SUPERFAMILY SSF48029 121 330 5.36E-55 T 09-03-2017 IPR011002 Flagellar motor switch protein FliG, alpha-helical BV404_RS04715 fb738231c1f844d70b20a2d880e1d4f2 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 41 67 8.1E-30 T 09-03-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BV404_RS04715 fb738231c1f844d70b20a2d880e1d4f2 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 278 304 8.1E-30 T 09-03-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BV404_RS04715 fb738231c1f844d70b20a2d880e1d4f2 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 254 274 8.1E-30 T 09-03-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BV404_RS04715 fb738231c1f844d70b20a2d880e1d4f2 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 121 144 8.1E-30 T 09-03-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BV404_RS04715 fb738231c1f844d70b20a2d880e1d4f2 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 232 252 8.1E-30 T 09-03-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BV404_RS04715 fb738231c1f844d70b20a2d880e1d4f2 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 12 28 8.1E-30 T 09-03-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BV404_RS04715 fb738231c1f844d70b20a2d880e1d4f2 339 Gene3D G3DSA:1.10.220.30 13 78 4.9E-15 T 09-03-2017 IPR011002 Flagellar motor switch protein FliG, alpha-helical BV404_RS04715 fb738231c1f844d70b20a2d880e1d4f2 339 Gene3D G3DSA:1.10.220.30 112 194 1.6E-25 T 09-03-2017 IPR011002 Flagellar motor switch protein FliG, alpha-helical BV404_RS09190 0763e608212b8655cdc2ab2be553dab7 426 Gene3D G3DSA:1.10.8.60 318 417 2.6E-38 T 09-03-2017 BV404_RS09190 0763e608212b8655cdc2ab2be553dab7 426 SMART SM01086 319 414 4.5E-34 T 09-03-2017 IPR019489 Clp ATPase, C-terminal BV404_RS09190 0763e608212b8655cdc2ab2be553dab7 426 Pfam PF07724 AAA domain (Cdc48 subfamily) 114 312 5.3E-49 T 09-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 BV404_RS09190 0763e608212b8655cdc2ab2be553dab7 426 SUPERFAMILY SSF57716 14 49 5.84E-12 T 09-03-2017 BV404_RS09190 0763e608212b8655cdc2ab2be553dab7 426 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 319 397 6.9E-16 T 09-03-2017 IPR019489 Clp ATPase, C-terminal BV404_RS09190 0763e608212b8655cdc2ab2be553dab7 426 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 12 414 3.8E-210 T 09-03-2017 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 BV404_RS09190 0763e608212b8655cdc2ab2be553dab7 426 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 417 53.417 T 09-03-2017 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 BV404_RS09190 0763e608212b8655cdc2ab2be553dab7 426 Gene3D G3DSA:3.40.50.300 296 312 3.3E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09190 0763e608212b8655cdc2ab2be553dab7 426 Gene3D G3DSA:3.40.50.300 67 255 3.3E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09190 0763e608212b8655cdc2ab2be553dab7 426 SUPERFAMILY SSF52540 63 404 6.37E-71 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09190 0763e608212b8655cdc2ab2be553dab7 426 SMART SM00994 13 52 1.0E-24 T 09-03-2017 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 BV404_RS09190 0763e608212b8655cdc2ab2be553dab7 426 SMART SM00382 113 266 1.8E-9 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS09190 0763e608212b8655cdc2ab2be553dab7 426 Pfam PF06689 ClpX C4-type zinc finger 14 51 3.0E-21 T 09-03-2017 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 BV404_RS09580 02f528fc745f17490407e2f601d7b176 435 Pfam PF02803 Thiolase, C-terminal domain 295 433 4.9E-35 T 09-03-2017 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 BV404_RS09580 02f528fc745f17490407e2f601d7b176 435 Gene3D G3DSA:3.40.47.10 220 299 2.0E-51 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 BV404_RS09580 02f528fc745f17490407e2f601d7b176 435 Gene3D G3DSA:3.40.47.10 14 133 2.0E-51 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 BV404_RS09580 02f528fc745f17490407e2f601d7b176 435 SUPERFAMILY SSF53901 296 434 1.67E-31 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 BV404_RS09580 02f528fc745f17490407e2f601d7b176 435 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 1 435 66.419 T 09-03-2017 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0005737|GO:0006631|GO:0016042|GO:0016740|GO:0016746 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 BV404_RS09580 02f528fc745f17490407e2f601d7b176 435 SUPERFAMILY SSF53901 14 294 2.76E-60 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 BV404_RS09580 02f528fc745f17490407e2f601d7b176 435 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 16 433 4.8E-125 T 09-03-2017 IPR002155 Thiolase GO:0008152|GO:0016747 BV404_RS09580 02f528fc745f17490407e2f601d7b176 435 Gene3D G3DSA:3.40.47.10 174 219 2.6E-46 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 BV404_RS09580 02f528fc745f17490407e2f601d7b176 435 Gene3D G3DSA:3.40.47.10 303 435 2.6E-46 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 BV404_RS09580 02f528fc745f17490407e2f601d7b176 435 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 6 435 6.7E-265 T 09-03-2017 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0005737|GO:0006631|GO:0016042|GO:0016740|GO:0016746 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 BV404_RS09580 02f528fc745f17490407e2f601d7b176 435 PIRSF PIRSF000429 8 435 3.2E-118 T 09-03-2017 IPR002155 Thiolase GO:0008152|GO:0016747 BV404_RS09580 02f528fc745f17490407e2f601d7b176 435 Pfam PF00108 Thiolase, N-terminal domain 14 286 1.7E-61 T 09-03-2017 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 BV404_RS09580 02f528fc745f17490407e2f601d7b176 435 ProSitePatterns PS00737 Thiolases signature 2. 381 397 - T 09-03-2017 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 BV404_RS02535 7e01d45dff14ca2e95cc2c78ffc3656d 105 TIGRFAM TIGR01321 TrpR: trp operon repressor 10 95 3.6E-26 T 09-03-2017 IPR013335 Trp repressor, bacterial GO:0006355 BV404_RS02535 7e01d45dff14ca2e95cc2c78ffc3656d 105 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 14 96 2.0E-32 T 09-03-2017 IPR013335 Trp repressor, bacterial GO:0006355 BV404_RS02535 7e01d45dff14ca2e95cc2c78ffc3656d 105 Gene3D G3DSA:1.10.1270.10 9 104 1.3E-37 T 09-03-2017 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 BV404_RS02535 7e01d45dff14ca2e95cc2c78ffc3656d 105 SUPERFAMILY SSF48295 6 104 6.8E-30 T 09-03-2017 IPR010921 Trp repressor/replication initiator GO:0043565 BV404_RS02535 7e01d45dff14ca2e95cc2c78ffc3656d 105 PIRSF PIRSF003196 9 105 2.8E-38 T 09-03-2017 IPR013335 Trp repressor, bacterial GO:0006355 BV404_RS02535 7e01d45dff14ca2e95cc2c78ffc3656d 105 Pfam PF01371 Trp repressor protein 17 102 2.7E-31 T 09-03-2017 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 BV404_RS02535 7e01d45dff14ca2e95cc2c78ffc3656d 105 Hamap MF_00475 Trp operon repressor [trpR]. 14 105 21.533 T 09-03-2017 IPR013335 Trp repressor, bacterial GO:0006355 BV404_RS01700 fbd66813fae5046b96225b5ffc2cdb98 323 SUPERFAMILY SSF101790 237 321 3.01E-20 T 09-03-2017 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain BV404_RS01700 fbd66813fae5046b96225b5ffc2cdb98 323 Gene3D G3DSA:3.30.70.1400 29 113 2.9E-32 T 09-03-2017 BV404_RS01700 fbd66813fae5046b96225b5ffc2cdb98 323 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 317 43.102 T 09-03-2017 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 BV404_RS01700 fbd66813fae5046b96225b5ffc2cdb98 323 SUPERFAMILY SSF103025 17 235 7.69E-55 T 09-03-2017 BV404_RS01700 fbd66813fae5046b96225b5ffc2cdb98 323 Pfam PF01571 Aminomethyltransferase folate-binding domain 30 142 9.0E-5 T 09-03-2017 IPR006222 Glycine cleavage T-protein-like, N-terminal BV404_RS01700 fbd66813fae5046b96225b5ffc2cdb98 323 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 181 245 4.4E-24 T 09-03-2017 IPR017703 YgfZ/GcvT conserved site BV404_RS08710 01822fb2fb1753aaa2b5710d0be47460 400 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 79 2.7E-37 T 09-03-2017 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 BV404_RS08710 01822fb2fb1753aaa2b5710d0be47460 400 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 1.2E-110 T 09-03-2017 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 BV404_RS08710 01822fb2fb1753aaa2b5710d0be47460 400 Gene3D G3DSA:3.40.50.720 40 281 3.3E-7 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS08710 01822fb2fb1753aaa2b5710d0be47460 400 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 395 56.733 T 09-03-2017 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 BV404_RS08710 01822fb2fb1753aaa2b5710d0be47460 400 Pfam PF07055 Enoyl reductase FAD binding domain 326 389 1.2E-31 T 09-03-2017 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 BV404_RS02210 e011112816d2491c2be2022027f658cb 98 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 1.4E-20 T 09-03-2017 IPR001890 RNA-binding, CRM domain GO:0003723 BV404_RS02210 e011112816d2491c2be2022027f658cb 98 Gene3D G3DSA:3.30.110.60 1 96 6.8E-32 T 09-03-2017 IPR001890 RNA-binding, CRM domain GO:0003723 BV404_RS02210 e011112816d2491c2be2022027f658cb 98 SUPERFAMILY SSF75471 1 94 7.46E-30 T 09-03-2017 IPR001890 RNA-binding, CRM domain GO:0003723 BV404_RS02210 e011112816d2491c2be2022027f658cb 98 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 97 3.1E-37 T 09-03-2017 IPR017924 RNA-binding protein YhbY GO:0003723 BV404_RS02210 e011112816d2491c2be2022027f658cb 98 SMART SM01103 3 86 1.1E-39 T 09-03-2017 IPR001890 RNA-binding, CRM domain GO:0003723 BV404_RS02210 e011112816d2491c2be2022027f658cb 98 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 98 4.0E-41 T 09-03-2017 IPR001890 RNA-binding, CRM domain GO:0003723 BV404_RS01950 548d58f0aa2cc6b619db4e09461ae35c 254 Gene3D G3DSA:3.10.450.70 39 93 2.8E-20 T 09-03-2017 IPR009094 Disulphide bond isomerase, DsbC, N-terminal BV404_RS01950 548d58f0aa2cc6b619db4e09461ae35c 254 Pfam PF10411 Disulfide bond isomerase protein N-terminus 42 91 1.3E-13 T 09-03-2017 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal BV404_RS01950 548d58f0aa2cc6b619db4e09461ae35c 254 SUPERFAMILY SSF54423 40 92 3.14E-13 T 09-03-2017 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal BV404_RS01950 548d58f0aa2cc6b619db4e09461ae35c 254 SUPERFAMILY SSF52833 111 253 6.05E-40 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS01950 548d58f0aa2cc6b619db4e09461ae35c 254 Pfam PF13098 Thioredoxin-like domain 123 251 1.1E-26 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS01950 548d58f0aa2cc6b619db4e09461ae35c 254 Gene3D G3DSA:3.40.30.10 118 253 1.1E-44 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS01950 548d58f0aa2cc6b619db4e09461ae35c 254 ProSitePatterns PS00194 Thioredoxin family active site. 130 148 - T 09-03-2017 IPR017937 Thioredoxin, conserved site GO:0045454 BV404_RS02945 e9ba55068619c79f9ace358307f7d0e8 152 Gene3D G3DSA:3.10.129.10 4 149 3.7E-58 T 09-03-2017 IPR029069 HotDog domain BV404_RS02945 e9ba55068619c79f9ace358307f7d0e8 152 SUPERFAMILY SSF54637 8 148 5.04E-50 T 09-03-2017 IPR029069 HotDog domain BV404_RS02945 e9ba55068619c79f9ace358307f7d0e8 152 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 10 148 5.6E-59 T 09-03-2017 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 BV404_RS02945 e9ba55068619c79f9ace358307f7d0e8 152 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 10 151 36.708 T 09-03-2017 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 BV404_RS02945 e9ba55068619c79f9ace358307f7d0e8 152 Pfam PF07977 FabA-like domain 19 143 3.9E-40 T 09-03-2017 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 BV404_RS00410 65d7eda41553de1ebb2d12200dfb7fab 161 Gene3D G3DSA:3.30.1360.40 84 153 3.5E-21 T 09-03-2017 IPR024946 Arginine repressor C-terminal-like domain BV404_RS00410 65d7eda41553de1ebb2d12200dfb7fab 161 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 96 136 3.0E-14 T 09-03-2017 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 BV404_RS00410 65d7eda41553de1ebb2d12200dfb7fab 161 Pfam PF01316 Arginine repressor, DNA binding domain 18 80 1.5E-14 T 09-03-2017 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 BV404_RS00410 65d7eda41553de1ebb2d12200dfb7fab 161 Hamap MF_00173 Arginine repressor [argR]. 1 161 40.967 T 09-03-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 BV404_RS00410 65d7eda41553de1ebb2d12200dfb7fab 161 PRINTS PR01467 Bacterial arginine repressor signature 49 64 2.7E-19 T 09-03-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 BV404_RS00410 65d7eda41553de1ebb2d12200dfb7fab 161 PRINTS PR01467 Bacterial arginine repressor signature 32 45 2.7E-19 T 09-03-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 BV404_RS00410 65d7eda41553de1ebb2d12200dfb7fab 161 PRINTS PR01467 Bacterial arginine repressor signature 97 110 2.7E-19 T 09-03-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 BV404_RS00410 65d7eda41553de1ebb2d12200dfb7fab 161 PRINTS PR01467 Bacterial arginine repressor signature 127 142 2.7E-19 T 09-03-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 BV404_RS00410 65d7eda41553de1ebb2d12200dfb7fab 161 SUPERFAMILY SSF55252 91 155 1.7E-16 T 09-03-2017 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 BV404_RS00410 65d7eda41553de1ebb2d12200dfb7fab 161 Pfam PF02863 Arginine repressor, C-terminal domain 93 151 6.1E-18 T 09-03-2017 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 BV404_RS00410 65d7eda41553de1ebb2d12200dfb7fab 161 Gene3D G3DSA:1.10.10.10 13 83 6.2E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS00410 65d7eda41553de1ebb2d12200dfb7fab 161 SUPERFAMILY SSF46785 14 81 3.54E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS11845 7cddbdc126b09390f8396762557f0240 951 Pfam PF05193 Peptidase M16 inactive domain 686 856 3.1E-23 T 09-03-2017 IPR007863 Peptidase M16, C-terminal BV404_RS11845 7cddbdc126b09390f8396762557f0240 951 Pfam PF05193 Peptidase M16 inactive domain 219 392 1.1E-28 T 09-03-2017 IPR007863 Peptidase M16, C-terminal BV404_RS11845 7cddbdc126b09390f8396762557f0240 951 SUPERFAMILY SSF63411 49 258 1.69E-55 T 09-03-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BV404_RS11845 7cddbdc126b09390f8396762557f0240 951 Pfam PF00675 Insulinase (Peptidase family M16) 538 647 3.8E-10 T 09-03-2017 IPR011765 Peptidase M16, N-terminal BV404_RS11845 7cddbdc126b09390f8396762557f0240 951 Pfam PF00675 Insulinase (Peptidase family M16) 62 180 3.7E-18 T 09-03-2017 IPR011765 Peptidase M16, N-terminal BV404_RS11845 7cddbdc126b09390f8396762557f0240 951 Gene3D G3DSA:3.30.830.10 283 462 1.1E-21 T 09-03-2017 IPR011237 Peptidase M16 domain GO:0046872 BV404_RS11845 7cddbdc126b09390f8396762557f0240 951 SUPERFAMILY SSF63411 281 467 1.43E-29 T 09-03-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BV404_RS11845 7cddbdc126b09390f8396762557f0240 951 Gene3D G3DSA:3.30.830.10 745 929 2.0E-22 T 09-03-2017 IPR011237 Peptidase M16 domain GO:0046872 BV404_RS11845 7cddbdc126b09390f8396762557f0240 951 SUPERFAMILY SSF63411 520 722 1.53E-43 T 09-03-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BV404_RS11845 7cddbdc126b09390f8396762557f0240 951 SUPERFAMILY SSF63411 737 940 1.35E-37 T 09-03-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BV404_RS11845 7cddbdc126b09390f8396762557f0240 951 Gene3D G3DSA:3.30.830.10 522 731 2.6E-46 T 09-03-2017 IPR011237 Peptidase M16 domain GO:0046872 BV404_RS11845 7cddbdc126b09390f8396762557f0240 951 Gene3D G3DSA:3.30.830.10 50 267 1.1E-56 T 09-03-2017 IPR011237 Peptidase M16 domain GO:0046872 BV404_RS00730 4a92033a62b5c1a97f338a75ea9afb41 624 PIRSF PIRSF036456 1 624 0.0 T 09-03-2017 IPR011244 Bifunctional argininosuccinate lyase/acetyltransferase GO:0004056|GO:0005737|GO:0006526|GO:0016746 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BV404_RS00730 4a92033a62b5c1a97f338a75ea9afb41 624 Gene3D G3DSA:1.10.40.30 375 432 7.0E-31 T 09-03-2017 BV404_RS00730 4a92033a62b5c1a97f338a75ea9afb41 624 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 40.478 T 09-03-2017 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BV404_RS00730 4a92033a62b5c1a97f338a75ea9afb41 624 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 09-03-2017 IPR020557 Fumarate lyase, conserved site GO:0003824 BV404_RS00730 4a92033a62b5c1a97f338a75ea9afb41 624 Gene3D G3DSA:1.20.200.10 108 374 1.7E-102 T 09-03-2017 BV404_RS00730 4a92033a62b5c1a97f338a75ea9afb41 624 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 1.5E-66 T 09-03-2017 BV404_RS00730 4a92033a62b5c1a97f338a75ea9afb41 624 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 1.5E-66 T 09-03-2017 BV404_RS00730 4a92033a62b5c1a97f338a75ea9afb41 624 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 1.5E-66 T 09-03-2017 BV404_RS00730 4a92033a62b5c1a97f338a75ea9afb41 624 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 1.5E-66 T 09-03-2017 BV404_RS00730 4a92033a62b5c1a97f338a75ea9afb41 624 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 1.5E-66 T 09-03-2017 BV404_RS00730 4a92033a62b5c1a97f338a75ea9afb41 624 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 1.5E-66 T 09-03-2017 BV404_RS00730 4a92033a62b5c1a97f338a75ea9afb41 624 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 1.5E-27 T 09-03-2017 IPR000362 Fumarate lyase family BV404_RS00730 4a92033a62b5c1a97f338a75ea9afb41 624 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 1.5E-27 T 09-03-2017 IPR000362 Fumarate lyase family BV404_RS00730 4a92033a62b5c1a97f338a75ea9afb41 624 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 1.5E-27 T 09-03-2017 IPR000362 Fumarate lyase family BV404_RS00730 4a92033a62b5c1a97f338a75ea9afb41 624 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 1.5E-27 T 09-03-2017 IPR000362 Fumarate lyase family BV404_RS00730 4a92033a62b5c1a97f338a75ea9afb41 624 Gene3D G3DSA:1.10.275.10 1 107 1.3E-35 T 09-03-2017 IPR024083 Fumarase/histidase, N-terminal BV404_RS00730 4a92033a62b5c1a97f338a75ea9afb41 624 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 7.7E-25 T 09-03-2017 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BV404_RS00730 4a92033a62b5c1a97f338a75ea9afb41 624 SUPERFAMILY SSF48557 3 456 5.65E-140 T 09-03-2017 IPR008948 L-Aspartase-like GO:0003824 BV404_RS00730 4a92033a62b5c1a97f338a75ea9afb41 624 Pfam PF00583 Acetyltransferase (GNAT) family 508 579 5.5E-9 T 09-03-2017 IPR000182 GNAT domain GO:0008080 BV404_RS00730 4a92033a62b5c1a97f338a75ea9afb41 624 Pfam PF00206 Lyase 6 301 1.0E-87 T 09-03-2017 IPR022761 Fumarate lyase, N-terminal BV404_RS00730 4a92033a62b5c1a97f338a75ea9afb41 624 SUPERFAMILY SSF55729 464 584 1.65E-17 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS00730 4a92033a62b5c1a97f338a75ea9afb41 624 Gene3D G3DSA:3.40.630.30 462 604 6.9E-30 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS00730 4a92033a62b5c1a97f338a75ea9afb41 624 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 3.5E-202 T 09-03-2017 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BV404_RS09630 498ecd71287ed96b07c44d10777eb537 213 SUPERFAMILY SSF52540 6 204 9.13E-50 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09630 498ecd71287ed96b07c44d10777eb537 213 TIGRFAM TIGR00235 udk: uridine kinase 3 211 1.5E-90 T 09-03-2017 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 BV404_RS09630 498ecd71287ed96b07c44d10777eb537 213 Gene3D G3DSA:3.40.50.300 3 204 3.3E-69 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09630 498ecd71287ed96b07c44d10777eb537 213 PRINTS PR00988 Uridine kinase signature 178 191 7.1E-37 T 09-03-2017 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 BV404_RS09630 498ecd71287ed96b07c44d10777eb537 213 PRINTS PR00988 Uridine kinase signature 41 52 7.1E-37 T 09-03-2017 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 BV404_RS09630 498ecd71287ed96b07c44d10777eb537 213 PRINTS PR00988 Uridine kinase signature 142 152 7.1E-37 T 09-03-2017 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 BV404_RS09630 498ecd71287ed96b07c44d10777eb537 213 PRINTS PR00988 Uridine kinase signature 156 167 7.1E-37 T 09-03-2017 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 BV404_RS09630 498ecd71287ed96b07c44d10777eb537 213 PRINTS PR00988 Uridine kinase signature 7 24 7.1E-37 T 09-03-2017 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 BV404_RS09630 498ecd71287ed96b07c44d10777eb537 213 PRINTS PR00988 Uridine kinase signature 86 101 7.1E-37 T 09-03-2017 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 BV404_RS09630 498ecd71287ed96b07c44d10777eb537 213 Hamap MF_00551 Uridine kinase [udk]. 4 212 39.582 T 09-03-2017 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 BV404_RS09630 498ecd71287ed96b07c44d10777eb537 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 9 198 6.9E-43 T 09-03-2017 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 BV404_RS11700 2f1a5ad2b3696e324ea026ab1dd43b3c 316 Gene3D G3DSA:1.10.150.170 112 219 2.7E-35 T 09-03-2017 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 BV404_RS11700 2f1a5ad2b3696e324ea026ab1dd43b3c 316 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 316 38.23 T 09-03-2017 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 BV404_RS11700 2f1a5ad2b3696e324ea026ab1dd43b3c 316 Gene3D G3DSA:3.40.50.150 220 316 2.0E-49 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS11700 2f1a5ad2b3696e324ea026ab1dd43b3c 316 Gene3D G3DSA:3.40.50.150 7 110 2.0E-49 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS11700 2f1a5ad2b3696e324ea026ab1dd43b3c 316 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 315 4.9E-120 T 09-03-2017 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 BV404_RS11700 2f1a5ad2b3696e324ea026ab1dd43b3c 316 PIRSF PIRSF004486 1 316 1.0E-100 T 09-03-2017 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 BV404_RS11700 2f1a5ad2b3696e324ea026ab1dd43b3c 316 SUPERFAMILY SSF53335 7 113 1.27E-43 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS11700 2f1a5ad2b3696e324ea026ab1dd43b3c 316 SUPERFAMILY SSF53335 217 316 1.27E-43 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS11700 2f1a5ad2b3696e324ea026ab1dd43b3c 316 SUPERFAMILY SSF81799 113 216 3.14E-31 T 09-03-2017 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 BV404_RS11700 2f1a5ad2b3696e324ea026ab1dd43b3c 316 Pfam PF01795 MraW methylase family 5 315 4.9E-112 T 09-03-2017 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 BV404_RS08885 d9d495e542563485386344cddb5ab446 705 Pfam PF00672 HAMP domain 356 425 2.3E-14 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 BV404_RS08885 d9d495e542563485386344cddb5ab446 705 Pfam PF02743 Cache domain 49 324 3.5E-19 T 09-03-2017 IPR033479 Double Cache domain 1 BV404_RS08885 d9d495e542563485386344cddb5ab446 705 SUPERFAMILY SSF58104 396 705 3.79E-73 T 09-03-2017 BV404_RS08885 d9d495e542563485386344cddb5ab446 705 Gene3D G3DSA:1.10.287.950 458 674 7.4E-54 T 09-03-2017 BV404_RS08885 d9d495e542563485386344cddb5ab446 705 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 489 703 5.0E-49 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 BV404_RS08885 d9d495e542563485386344cddb5ab446 705 SMART SM00304 374 428 6.6E-15 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 BV404_RS08885 d9d495e542563485386344cddb5ab446 705 Gene3D G3DSA:3.30.450.20 212 339 1.2E-7 T 09-03-2017 BV404_RS08885 d9d495e542563485386344cddb5ab446 705 SMART SM00283 443 704 9.9E-66 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 BV404_RS03525 df8bf0238c235e472e2db79b01153e47 378 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 8.4E-23 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BV404_RS03525 df8bf0238c235e472e2db79b01153e47 378 SUPERFAMILY SSF64518 1 376 5.49E-94 T 09-03-2017 BV404_RS03525 df8bf0238c235e472e2db79b01153e47 378 PRINTS PR00207 Flagellin signature 111 134 1.0E-25 T 09-03-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BV404_RS03525 df8bf0238c235e472e2db79b01153e47 378 PRINTS PR00207 Flagellin signature 76 95 1.0E-25 T 09-03-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BV404_RS03525 df8bf0238c235e472e2db79b01153e47 378 PRINTS PR00207 Flagellin signature 37 54 1.0E-25 T 09-03-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BV404_RS03525 df8bf0238c235e472e2db79b01153e47 378 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.8E-42 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BV404_RS03525 df8bf0238c235e472e2db79b01153e47 378 Pfam PF07196 Flagellin hook IN motif 195 245 3.4E-9 T 09-03-2017 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 BV404_RS03525 df8bf0238c235e472e2db79b01153e47 378 Gene3D G3DSA:1.20.1330.10 55 171 1.9E-60 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BV404_RS03525 df8bf0238c235e472e2db79b01153e47 378 Gene3D G3DSA:1.20.1330.10 279 332 1.9E-60 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BV404_RS03805 7daa42f5efc3ac6720d14c1bee931f10 402 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 402 1.1E-185 T 09-03-2017 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 BV404_RS03805 7daa42f5efc3ac6720d14c1bee931f10 402 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 172 400 1.9E-80 T 09-03-2017 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 BV404_RS03805 7daa42f5efc3ac6720d14c1bee931f10 402 Gene3D G3DSA:3.30.559.10 163 400 7.9E-91 T 09-03-2017 IPR023213 Chloramphenicol acetyltransferase-like domain Reactome: R-HSA-389661 BV404_RS03805 7daa42f5efc3ac6720d14c1bee931f10 402 Gene3D G3DSA:2.40.50.100 1 96 2.9E-26 T 09-03-2017 BV404_RS03805 7daa42f5efc3ac6720d14c1bee931f10 402 SUPERFAMILY SSF47005 108 149 1.31E-11 T 09-03-2017 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 BV404_RS03805 7daa42f5efc3ac6720d14c1bee931f10 402 SUPERFAMILY SSF52777 172 401 4.89E-89 T 09-03-2017 BV404_RS03805 7daa42f5efc3ac6720d14c1bee931f10 402 Pfam PF02817 e3 binding domain 113 146 3.0E-12 T 09-03-2017 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 BV404_RS03805 7daa42f5efc3ac6720d14c1bee931f10 402 Pfam PF00364 Biotin-requiring enzyme 4 76 5.7E-19 T 09-03-2017 IPR000089 Biotin/lipoyl attachment BV404_RS03805 7daa42f5efc3ac6720d14c1bee931f10 402 Gene3D G3DSA:4.10.320.10 113 152 5.8E-20 T 09-03-2017 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 BV404_RS03805 7daa42f5efc3ac6720d14c1bee931f10 402 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 09-03-2017 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 BV404_RS03805 7daa42f5efc3ac6720d14c1bee931f10 402 SUPERFAMILY SSF51230 1 93 1.07E-24 T 09-03-2017 IPR011053 Single hybrid motif BV404_RS07855 363bfdeabb31f83fcccbf76ff52e791b 387 Pfam PF12698 ABC-2 family transporter protein 17 353 4.4E-42 T 09-03-2017 BV404_RS00055 5a7373cf11b51343075521e125d9ea20 224 Gene3D G3DSA:3.40.50.620 1 141 6.6E-24 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS00055 5a7373cf11b51343075521e125d9ea20 224 SUPERFAMILY SSF52402 1 215 1.5E-51 T 09-03-2017 BV404_RS00055 5a7373cf11b51343075521e125d9ea20 224 Pfam PF01902 Diphthamide synthase 3 212 1.3E-23 T 09-03-2017 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|Reactome: R-HSA-5358493 BV404_RS00055 5a7373cf11b51343075521e125d9ea20 224 Gene3D G3DSA:3.90.1490.10 145 210 6.3E-12 T 09-03-2017 BV404_RS14890 5a7373cf11b51343075521e125d9ea20 224 Gene3D G3DSA:3.40.50.620 1 141 6.6E-24 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS14890 5a7373cf11b51343075521e125d9ea20 224 SUPERFAMILY SSF52402 1 215 1.5E-51 T 09-03-2017 BV404_RS14890 5a7373cf11b51343075521e125d9ea20 224 Pfam PF01902 Diphthamide synthase 3 212 1.3E-23 T 09-03-2017 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|Reactome: R-HSA-5358493 BV404_RS14890 5a7373cf11b51343075521e125d9ea20 224 Gene3D G3DSA:3.90.1490.10 145 210 6.3E-12 T 09-03-2017 BV404_RS06620 59395d4e88c469167a7abd00a75ef6f6 191 Gene3D G3DSA:3.40.630.30 14 185 7.4E-43 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS06620 59395d4e88c469167a7abd00a75ef6f6 191 Pfam PF13302 Acetyltransferase (GNAT) domain 17 160 2.8E-20 T 09-03-2017 IPR000182 GNAT domain GO:0008080 BV404_RS06620 59395d4e88c469167a7abd00a75ef6f6 191 SUPERFAMILY SSF55729 13 184 1.21E-40 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS14230 107c7a86cf67d4ee4285eabfe5025ff6 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 7.9E-251 T 09-03-2017 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 BV404_RS14230 107c7a86cf67d4ee4285eabfe5025ff6 513 SUPERFAMILY SSF47917 383 511 5.49E-45 T 09-03-2017 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 BV404_RS14230 107c7a86cf67d4ee4285eabfe5025ff6 513 Gene3D G3DSA:3.40.50.300 94 382 7.2E-113 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS14230 107c7a86cf67d4ee4285eabfe5025ff6 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 92 4.9E-13 T 09-03-2017 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 BV404_RS14230 107c7a86cf67d4ee4285eabfe5025ff6 513 SUPERFAMILY SSF52540 96 381 4.69E-95 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS14230 107c7a86cf67d4ee4285eabfe5025ff6 513 SUPERFAMILY SSF50615 10 94 5.1E-26 T 09-03-2017 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 BV404_RS14230 107c7a86cf67d4ee4285eabfe5025ff6 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 49.685 T 09-03-2017 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 BV404_RS14230 107c7a86cf67d4ee4285eabfe5025ff6 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 9.3E-73 T 09-03-2017 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 BV404_RS14230 107c7a86cf67d4ee4285eabfe5025ff6 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 1.3E-43 T 09-03-2017 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 BV404_RS14230 107c7a86cf67d4ee4285eabfe5025ff6 513 Gene3D G3DSA:2.40.30.20 1 93 9.1E-30 T 09-03-2017 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 BV404_RS14230 107c7a86cf67d4ee4285eabfe5025ff6 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 09-03-2017 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 BV404_RS14230 107c7a86cf67d4ee4285eabfe5025ff6 513 Gene3D G3DSA:1.20.150.20 383 510 5.9E-47 T 09-03-2017 BV404_RS09705 2395815bcc466882442bd79ee85eef19 467 Pfam PF02954 Bacterial regulatory protein, Fis family 418 456 3.9E-12 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BV404_RS09705 2395815bcc466882442bd79ee85eef19 467 Gene3D G3DSA:1.10.8.60 320 392 1.2E-20 T 09-03-2017 BV404_RS09705 2395815bcc466882442bd79ee85eef19 467 Gene3D G3DSA:3.40.50.300 144 319 9.3E-58 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09705 2395815bcc466882442bd79ee85eef19 467 Gene3D G3DSA:3.40.50.2300 12 135 7.5E-36 T 09-03-2017 BV404_RS09705 2395815bcc466882442bd79ee85eef19 467 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 360 369 - T 09-03-2017 IPR025944 Sigma-54 interaction domain, conserved site BV404_RS09705 2395815bcc466882442bd79ee85eef19 467 SMART SM00448 11 122 1.2E-31 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS09705 2395815bcc466882442bd79ee85eef19 467 SUPERFAMILY SSF52540 147 390 1.26E-68 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09705 2395815bcc466882442bd79ee85eef19 467 SUPERFAMILY SSF46689 409 459 5.38E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS09705 2395815bcc466882442bd79ee85eef19 467 Pfam PF00072 Response regulator receiver domain 14 122 1.9E-26 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS09705 2395815bcc466882442bd79ee85eef19 467 SMART SM00382 167 310 7.3E-9 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS09705 2395815bcc466882442bd79ee85eef19 467 Gene3D G3DSA:1.10.10.60 413 456 1.0E-11 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS09705 2395815bcc466882442bd79ee85eef19 467 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 233 248 - T 09-03-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BV404_RS09705 2395815bcc466882442bd79ee85eef19 467 SUPERFAMILY SSF52172 13 191 2.85E-41 T 09-03-2017 IPR011006 CheY-like superfamily BV404_RS09705 2395815bcc466882442bd79ee85eef19 467 Pfam PF00158 Sigma-54 interaction domain 148 313 5.9E-68 T 09-03-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BV404_RS03585 cbee7e643f12ad0f7257f5de6e5924f2 350 PRINTS PR00954 Flagellar motor switch protein FliG signature 213 238 5.5E-57 T 09-03-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BV404_RS03585 cbee7e643f12ad0f7257f5de6e5924f2 350 PRINTS PR00954 Flagellar motor switch protein FliG signature 266 286 5.5E-57 T 09-03-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BV404_RS03585 cbee7e643f12ad0f7257f5de6e5924f2 350 PRINTS PR00954 Flagellar motor switch protein FliG signature 23 39 5.5E-57 T 09-03-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BV404_RS03585 cbee7e643f12ad0f7257f5de6e5924f2 350 PRINTS PR00954 Flagellar motor switch protein FliG signature 52 78 5.5E-57 T 09-03-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BV404_RS03585 cbee7e643f12ad0f7257f5de6e5924f2 350 PRINTS PR00954 Flagellar motor switch protein FliG signature 132 155 5.5E-57 T 09-03-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BV404_RS03585 cbee7e643f12ad0f7257f5de6e5924f2 350 PRINTS PR00954 Flagellar motor switch protein FliG signature 290 316 5.5E-57 T 09-03-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BV404_RS03585 cbee7e643f12ad0f7257f5de6e5924f2 350 PRINTS PR00954 Flagellar motor switch protein FliG signature 244 264 5.5E-57 T 09-03-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BV404_RS03585 cbee7e643f12ad0f7257f5de6e5924f2 350 Pfam PF14841 FliG middle domain 133 205 7.4E-26 T 09-03-2017 IPR032779 Flagellar motor switch protein FliG, middle domain BV404_RS03585 cbee7e643f12ad0f7257f5de6e5924f2 350 SUPERFAMILY SSF48029 132 343 3.27E-67 T 09-03-2017 IPR011002 Flagellar motor switch protein FliG, alpha-helical BV404_RS03585 cbee7e643f12ad0f7257f5de6e5924f2 350 Gene3D G3DSA:1.10.220.30 27 92 7.0E-15 T 09-03-2017 IPR011002 Flagellar motor switch protein FliG, alpha-helical BV404_RS03585 cbee7e643f12ad0f7257f5de6e5924f2 350 Gene3D G3DSA:1.10.220.30 123 207 2.0E-31 T 09-03-2017 IPR011002 Flagellar motor switch protein FliG, alpha-helical BV404_RS03585 cbee7e643f12ad0f7257f5de6e5924f2 350 Pfam PF01706 FliG C-terminal domain 236 342 1.2E-40 T 09-03-2017 IPR023087 Flagellar motor switch protein FliG, C-terminal BV404_RS03585 cbee7e643f12ad0f7257f5de6e5924f2 350 Gene3D G3DSA:1.10.220.30 213 348 7.6E-41 T 09-03-2017 IPR011002 Flagellar motor switch protein FliG, alpha-helical BV404_RS03585 cbee7e643f12ad0f7257f5de6e5924f2 350 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 19 348 9.4E-94 T 09-03-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BV404_RS03585 cbee7e643f12ad0f7257f5de6e5924f2 350 PIRSF PIRSF003161 18 350 7.2E-112 T 09-03-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BV404_RS03585 cbee7e643f12ad0f7257f5de6e5924f2 350 SUPERFAMILY SSF48029 24 135 5.49E-20 T 09-03-2017 IPR011002 Flagellar motor switch protein FliG, alpha-helical BV404_RS03585 cbee7e643f12ad0f7257f5de6e5924f2 350 Pfam PF14842 FliG N-terminal domain 24 123 3.3E-27 T 09-03-2017 IPR028263 Flagellar motor switch protein FliG, N-terminal domain BV404_RS14590 8573776ebf63f5d0abf161800bfba477 932 SUPERFAMILY SSF47807 171 290 2.54E-29 T 09-03-2017 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 BV404_RS14590 8573776ebf63f5d0abf161800bfba477 932 SUPERFAMILY SSF88723 7 170 1.21E-56 T 09-03-2017 IPR029060 PIN domain-like BV404_RS14590 8573776ebf63f5d0abf161800bfba477 932 Pfam PF00476 DNA polymerase family A 556 930 9.8E-158 T 09-03-2017 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS14590 8573776ebf63f5d0abf161800bfba477 932 SMART SM00475 7 268 4.6E-121 T 09-03-2017 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 BV404_RS14590 8573776ebf63f5d0abf161800bfba477 932 Gene3D G3DSA:3.30.420.10 331 545 7.9E-86 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 BV404_RS14590 8573776ebf63f5d0abf161800bfba477 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 681 696 1.5E-78 T 09-03-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS14590 8573776ebf63f5d0abf161800bfba477 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 879 892 1.5E-78 T 09-03-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS14590 8573776ebf63f5d0abf161800bfba477 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 757 782 1.5E-78 T 09-03-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS14590 8573776ebf63f5d0abf161800bfba477 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 816 827 1.5E-78 T 09-03-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS14590 8573776ebf63f5d0abf161800bfba477 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 658 680 1.5E-78 T 09-03-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS14590 8573776ebf63f5d0abf161800bfba477 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 733 746 1.5E-78 T 09-03-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS14590 8573776ebf63f5d0abf161800bfba477 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 703 726 1.5E-78 T 09-03-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS14590 8573776ebf63f5d0abf161800bfba477 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 794 805 1.5E-78 T 09-03-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS14590 8573776ebf63f5d0abf161800bfba477 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 848 864 1.5E-78 T 09-03-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS14590 8573776ebf63f5d0abf161800bfba477 932 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 271 5.1E-28 T 09-03-2017 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 BV404_RS14590 8573776ebf63f5d0abf161800bfba477 932 SMART SM00474 333 520 1.3E-44 T 09-03-2017 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 BV404_RS14590 8573776ebf63f5d0abf161800bfba477 932 Gene3D G3DSA:1.20.1060.10 546 666 8.3E-37 T 09-03-2017 BV404_RS14590 8573776ebf63f5d0abf161800bfba477 932 Gene3D G3DSA:1.10.150.20 715 821 2.9E-37 T 09-03-2017 BV404_RS14590 8573776ebf63f5d0abf161800bfba477 932 Gene3D G3DSA:1.10.150.20 187 253 3.0E-25 T 09-03-2017 BV404_RS14590 8573776ebf63f5d0abf161800bfba477 932 SUPERFAMILY SSF53098 336 521 1.06E-54 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 BV404_RS14590 8573776ebf63f5d0abf161800bfba477 932 Gene3D G3DSA:3.30.70.370 667 714 8.2E-67 T 09-03-2017 BV404_RS14590 8573776ebf63f5d0abf161800bfba477 932 Gene3D G3DSA:3.30.70.370 822 932 8.2E-67 T 09-03-2017 BV404_RS14590 8573776ebf63f5d0abf161800bfba477 932 SMART SM00482 689 896 3.1E-118 T 09-03-2017 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS14590 8573776ebf63f5d0abf161800bfba477 932 Gene3D G3DSA:3.40.50.1010 8 186 2.3E-73 T 09-03-2017 IPR029060 PIN domain-like BV404_RS14590 8573776ebf63f5d0abf161800bfba477 932 SMART SM00279 173 208 2.5E-13 T 09-03-2017 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 BV404_RS14590 8573776ebf63f5d0abf161800bfba477 932 Pfam PF01612 3'-5' exonuclease 333 520 1.5E-39 T 09-03-2017 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 BV404_RS14590 8573776ebf63f5d0abf161800bfba477 932 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 1.4E-54 T 09-03-2017 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 BV404_RS14590 8573776ebf63f5d0abf161800bfba477 932 ProSitePatterns PS00447 DNA polymerase family A signature. 757 776 - T 09-03-2017 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS14590 8573776ebf63f5d0abf161800bfba477 932 SUPERFAMILY SSF56672 525 932 5.67E-159 T 09-03-2017 BV404_RS14590 8573776ebf63f5d0abf161800bfba477 932 TIGRFAM TIGR00593 pola: DNA polymerase I 9 932 1.4E-283 T 09-03-2017 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS11525 419591984b48ebf2a17a872fcc5050c6 583 Gene3D G3DSA:3.30.70.270 416 578 5.9E-54 T 09-03-2017 BV404_RS11525 419591984b48ebf2a17a872fcc5050c6 583 SMART SM00091 38 104 88.0 T 09-03-2017 IPR000014 PAS domain BV404_RS11525 419591984b48ebf2a17a872fcc5050c6 583 SMART SM00091 281 348 0.0038 T 09-03-2017 IPR000014 PAS domain BV404_RS11525 419591984b48ebf2a17a872fcc5050c6 583 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 278 403 8.0E-14 T 09-03-2017 IPR000014 PAS domain BV404_RS11525 419591984b48ebf2a17a872fcc5050c6 583 Gene3D G3DSA:3.30.450.20 34 134 7.6E-5 T 09-03-2017 BV404_RS11525 419591984b48ebf2a17a872fcc5050c6 583 SUPERFAMILY SSF55785 158 253 7.15E-5 T 09-03-2017 IPR000014 PAS domain BV404_RS11525 419591984b48ebf2a17a872fcc5050c6 583 SUPERFAMILY SSF55785 268 394 6.28E-18 T 09-03-2017 IPR000014 PAS domain BV404_RS11525 419591984b48ebf2a17a872fcc5050c6 583 Gene3D G3DSA:3.30.450.20 268 393 2.1E-18 T 09-03-2017 BV404_RS11525 419591984b48ebf2a17a872fcc5050c6 583 Pfam PF13188 PAS domain 43 81 0.032 T 09-03-2017 IPR000014 PAS domain BV404_RS11525 419591984b48ebf2a17a872fcc5050c6 583 Pfam PF08448 PAS fold 287 397 3.5E-19 T 09-03-2017 IPR013656 PAS fold-4 BV404_RS11525 419591984b48ebf2a17a872fcc5050c6 583 SUPERFAMILY SSF55073 419 578 2.01E-49 T 09-03-2017 IPR029787 Nucleotide cyclase BV404_RS11525 419591984b48ebf2a17a872fcc5050c6 583 Pfam PF00990 Diguanylate cyclase, GGDEF domain 415 575 8.7E-52 T 09-03-2017 IPR000160 GGDEF domain BV404_RS11525 419591984b48ebf2a17a872fcc5050c6 583 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 410 578 9.1E-49 T 09-03-2017 IPR000160 GGDEF domain BV404_RS11525 419591984b48ebf2a17a872fcc5050c6 583 SMART SM00267 403 579 7.0E-75 T 09-03-2017 IPR000160 GGDEF domain BV404_RS13470 4e8fa14034e4b519b40bd35abd3452ac 182 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 169 8.0E-81 T 09-03-2017 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 BV404_RS13470 4e8fa14034e4b519b40bd35abd3452ac 182 SUPERFAMILY SSF51182 1 179 8.11E-79 T 09-03-2017 IPR011051 RmlC-like cupin domain BV404_RS13470 4e8fa14034e4b519b40bd35abd3452ac 182 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 178 6.4E-83 T 09-03-2017 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 BV404_RS13470 4e8fa14034e4b519b40bd35abd3452ac 182 Gene3D G3DSA:2.60.120.10 1 179 1.5E-82 T 09-03-2017 IPR014710 RmlC-like jelly roll fold BV404_RS13470 4e8fa14034e4b519b40bd35abd3452ac 182 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 176 2.6E-75 T 09-03-2017 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 BV404_RS09665 9e7ce99d67084a439de60c41d642db3d 317 Pfam PF08448 PAS fold 20 136 1.1E-5 T 09-03-2017 IPR013656 PAS fold-4 BV404_RS09665 9e7ce99d67084a439de60c41d642db3d 317 Gene3D G3DSA:3.30.70.270 154 317 4.1E-42 T 09-03-2017 BV404_RS09665 9e7ce99d67084a439de60c41d642db3d 317 SUPERFAMILY SSF55073 157 317 6.2E-41 T 09-03-2017 IPR029787 Nucleotide cyclase BV404_RS09665 9e7ce99d67084a439de60c41d642db3d 317 SMART SM00267 141 317 1.7E-48 T 09-03-2017 IPR000160 GGDEF domain BV404_RS09665 9e7ce99d67084a439de60c41d642db3d 317 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 148 315 1.9E-40 T 09-03-2017 IPR000160 GGDEF domain BV404_RS09665 9e7ce99d67084a439de60c41d642db3d 317 Pfam PF00990 Diguanylate cyclase, GGDEF domain 153 312 8.5E-40 T 09-03-2017 IPR000160 GGDEF domain BV404_RS09665 9e7ce99d67084a439de60c41d642db3d 317 Gene3D G3DSA:3.30.450.20 15 133 2.0E-6 T 09-03-2017 BV404_RS09665 9e7ce99d67084a439de60c41d642db3d 317 SUPERFAMILY SSF55785 14 94 7.44E-5 T 09-03-2017 IPR000014 PAS domain BV404_RS00540 8e1a874a9e38dd2d564afd03d2cd1a28 425 SUPERFAMILY SSF53223 20 171 1.51E-51 T 09-03-2017 BV404_RS00540 8e1a874a9e38dd2d564afd03d2cd1a28 425 SMART SM00919 173 409 2.3E-136 T 09-03-2017 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 BV404_RS00540 8e1a874a9e38dd2d564afd03d2cd1a28 425 PIRSF PIRSF000106 53 425 4.7E-71 T 09-03-2017 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 BV404_RS00540 8e1a874a9e38dd2d564afd03d2cd1a28 425 Pfam PF03949 Malic enzyme, NAD binding domain 175 369 5.7E-25 T 09-03-2017 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 BV404_RS00540 8e1a874a9e38dd2d564afd03d2cd1a28 425 ProSitePatterns PS00331 Malic enzymes signature. 169 185 - T 09-03-2017 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 BV404_RS00540 8e1a874a9e38dd2d564afd03d2cd1a28 425 Gene3D G3DSA:3.40.50.720 171 420 9.1E-85 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS00540 8e1a874a9e38dd2d564afd03d2cd1a28 425 Gene3D G3DSA:3.40.50.10380 20 170 9.7E-49 T 09-03-2017 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 BV404_RS00540 8e1a874a9e38dd2d564afd03d2cd1a28 425 SUPERFAMILY SSF51735 173 419 1.4E-79 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS00540 8e1a874a9e38dd2d564afd03d2cd1a28 425 SMART SM01274 28 161 3.5E-73 T 09-03-2017 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 BV404_RS00540 8e1a874a9e38dd2d564afd03d2cd1a28 425 Pfam PF00390 Malic enzyme, N-terminal domain 30 124 2.5E-20 T 09-03-2017 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 BV404_RS12235 3fade933e398b146d6cc401b5125b403 664 SUPERFAMILY SSF52518 5 319 5.09E-120 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold BV404_RS12235 3fade933e398b146d6cc401b5125b403 664 Gene3D G3DSA:3.40.50.970 326 533 2.0E-81 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold BV404_RS12235 3fade933e398b146d6cc401b5125b403 664 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 09-03-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BV404_RS12235 3fade933e398b146d6cc401b5125b403 664 SUPERFAMILY SSF52922 533 664 1.23E-44 T 09-03-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 BV404_RS12235 3fade933e398b146d6cc401b5125b403 664 Gene3D G3DSA:3.40.50.970 4 318 1.1E-132 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold BV404_RS12235 3fade933e398b146d6cc401b5125b403 664 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 1.4E-47 T 09-03-2017 IPR005475 Transketolase-like, pyrimidine-binding domain BV404_RS12235 3fade933e398b146d6cc401b5125b403 664 Gene3D G3DSA:3.40.50.920 538 663 1.6E-51 T 09-03-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 BV404_RS12235 3fade933e398b146d6cc401b5125b403 664 SUPERFAMILY SSF52518 335 526 5.54E-68 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold BV404_RS12235 3fade933e398b146d6cc401b5125b403 664 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 09-03-2017 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BV404_RS12235 3fade933e398b146d6cc401b5125b403 664 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 663 0.0 T 09-03-2017 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 BV404_RS12235 3fade933e398b146d6cc401b5125b403 664 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 333 4.6E-166 T 09-03-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BV404_RS12235 3fade933e398b146d6cc401b5125b403 664 Pfam PF02780 Transketolase, C-terminal domain 541 655 8.0E-20 T 09-03-2017 IPR033248 Transketolase, C-terminal domain BV404_RS12235 3fade933e398b146d6cc401b5125b403 664 SMART SM00861 354 525 2.8E-67 T 09-03-2017 IPR005475 Transketolase-like, pyrimidine-binding domain BV404_RS07965 39b8382771fba95cdf1e65a11b3a88c4 204 SUPERFAMILY SSF53254 3 164 5.14E-31 T 09-03-2017 IPR029033 Histidine phosphatase superfamily BV404_RS07965 39b8382771fba95cdf1e65a11b3a88c4 204 SMART SM00855 3 151 3.6E-10 T 09-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 BV404_RS07965 39b8382771fba95cdf1e65a11b3a88c4 204 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 191 9.2E-29 T 09-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 BV404_RS07965 39b8382771fba95cdf1e65a11b3a88c4 204 Gene3D G3DSA:3.40.50.1240 3 185 6.1E-29 T 09-03-2017 IPR029033 Histidine phosphatase superfamily BV404_RS01110 8a1f1ab82dc1a53b7c88254a04a90a84 292 Gene3D G3DSA:3.30.950.10 156 281 1.0E-47 T 09-03-2017 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 BV404_RS01110 8a1f1ab82dc1a53b7c88254a04a90a84 292 Gene3D G3DSA:3.40.1010.10 39 155 4.9E-46 T 09-03-2017 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 BV404_RS01110 8a1f1ab82dc1a53b7c88254a04a90a84 292 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 42 251 4.1E-47 T 09-03-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 BV404_RS01110 8a1f1ab82dc1a53b7c88254a04a90a84 292 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 120 153 - T 09-03-2017 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 BV404_RS01110 8a1f1ab82dc1a53b7c88254a04a90a84 292 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 45 59 - T 09-03-2017 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 BV404_RS01110 8a1f1ab82dc1a53b7c88254a04a90a84 292 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 40 272 5.1E-92 T 09-03-2017 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 BV404_RS01110 8a1f1ab82dc1a53b7c88254a04a90a84 292 SUPERFAMILY SSF53790 36 281 7.85E-79 T 09-03-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 BV404_RS14355 beafc0d2a7acffac8b0994e102704904 648 Pfam PF01964 Radical SAM ThiC family 144 591 2.1E-200 T 09-03-2017 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 BV404_RS14355 beafc0d2a7acffac8b0994e102704904 648 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 143 596 56.186 T 09-03-2017 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 BV404_RS14355 beafc0d2a7acffac8b0994e102704904 648 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 143 593 1.0E-218 T 09-03-2017 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 BV404_RS14355 beafc0d2a7acffac8b0994e102704904 648 Pfam PF13667 ThiC-associated domain 22 104 9.4E-34 T 09-03-2017 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 BV404_RS10000 a34cda2d5e6c1bd2478a87cad4038d43 152 SUPERFAMILY SSF141322 88 148 2.35E-8 T 09-03-2017 BV404_RS10000 a34cda2d5e6c1bd2478a87cad4038d43 152 Pfam PF01957 NfeD-like C-terminal, partner-binding 12 149 1.7E-24 T 09-03-2017 IPR002810 NfeD-like, C-terminal domain BV404_RS10000 a34cda2d5e6c1bd2478a87cad4038d43 152 Gene3D G3DSA:2.40.50.140 93 148 2.8E-17 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS11490 518a82bf5e07546072982d4d742138f9 819 SUPERFAMILY SSF55347 614 797 6.08E-51 T 09-03-2017 BV404_RS11490 518a82bf5e07546072982d4d742138f9 819 Pfam PF01842 ACT domain 324 380 3.0E-9 T 09-03-2017 IPR002912 ACT domain GO:0008152|GO:0016597 BV404_RS11490 518a82bf5e07546072982d4d742138f9 819 Pfam PF13840 ACT domain 394 456 3.8E-7 T 09-03-2017 IPR027795 GATS-like ACT domain BV404_RS11490 518a82bf5e07546072982d4d742138f9 819 SUPERFAMILY SSF53633 1 298 2.88E-75 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase BV404_RS11490 518a82bf5e07546072982d4d742138f9 819 Gene3D G3DSA:3.40.1160.10 1 49 1.8E-67 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase BV404_RS11490 518a82bf5e07546072982d4d742138f9 819 Gene3D G3DSA:3.40.1160.10 111 299 1.8E-67 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase BV404_RS11490 518a82bf5e07546072982d4d742138f9 819 SUPERFAMILY SSF51735 463 636 9.09E-38 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS11490 518a82bf5e07546072982d4d742138f9 819 Gene3D G3DSA:3.30.360.10 636 791 2.5E-54 T 09-03-2017 BV404_RS11490 518a82bf5e07546072982d4d742138f9 819 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 606 1.2E-25 T 09-03-2017 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 BV404_RS11490 518a82bf5e07546072982d4d742138f9 819 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 3.2E-130 T 09-03-2017 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 BV404_RS11490 518a82bf5e07546072982d4d742138f9 819 Pfam PF00696 Amino acid kinase family 2 284 3.0E-50 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase BV404_RS11490 518a82bf5e07546072982d4d742138f9 819 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 09-03-2017 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 BV404_RS11490 518a82bf5e07546072982d4d742138f9 819 SUPERFAMILY SSF55021 383 476 9.16E-20 T 09-03-2017 BV404_RS11490 518a82bf5e07546072982d4d742138f9 819 Pfam PF00742 Homoserine dehydrogenase 614 810 3.4E-47 T 09-03-2017 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 BV404_RS11490 518a82bf5e07546072982d4d742138f9 819 SUPERFAMILY SSF55021 303 381 2.75E-21 T 09-03-2017 BV404_RS11490 518a82bf5e07546072982d4d742138f9 819 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 09-03-2017 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 BV404_RS11490 518a82bf5e07546072982d4d742138f9 819 PIRSF PIRSF000727 1 817 0.0 T 09-03-2017 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+2.7.2.4+1.1.1.3|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4+1.1.1.3|KEGG: 00300+2.7.2.4+1.1.1.3|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 BV404_RS11490 518a82bf5e07546072982d4d742138f9 819 Gene3D G3DSA:3.40.50.720 466 635 5.6E-63 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS05395 7eeecc64c6c50ec880566dd24348c59c 543 PIRSF PIRSF002741 1 543 6.0E-119 T 09-03-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 BV404_RS05395 7eeecc64c6c50ec880566dd24348c59c 543 Gene3D G3DSA:3.10.105.10 311 511 2.1E-68 T 09-03-2017 BV404_RS05395 7eeecc64c6c50ec880566dd24348c59c 543 Gene3D G3DSA:3.40.190.10 158 310 5.0E-54 T 09-03-2017 BV404_RS05395 7eeecc64c6c50ec880566dd24348c59c 543 SUPERFAMILY SSF53850 39 527 2.71E-147 T 09-03-2017 BV404_RS05395 7eeecc64c6c50ec880566dd24348c59c 543 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 88 109 - T 09-03-2017 IPR023765 Solute-binding protein family 5, conserved site BV404_RS05395 7eeecc64c6c50ec880566dd24348c59c 543 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 463 5.4E-98 T 09-03-2017 IPR000914 Solute-binding protein family 5 domain BV404_RS02830 3b7b253fb189646005646f2393e8ea9c 416 PIRSF PIRSF000151 2 416 3.7E-164 T 09-03-2017 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 BV404_RS02830 3b7b253fb189646005646f2393e8ea9c 416 Gene3D G3DSA:3.40.309.10 224 373 4.9E-37 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 BV404_RS02830 3b7b253fb189646005646f2393e8ea9c 416 Pfam PF00171 Aldehyde dehydrogenase family 8 279 5.9E-15 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 BV404_RS02830 3b7b253fb189646005646f2393e8ea9c 416 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 322 343 - T 09-03-2017 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BV404_RS02830 3b7b253fb189646005646f2393e8ea9c 416 Gene3D G3DSA:3.40.605.10 374 412 3.8E-98 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 BV404_RS02830 3b7b253fb189646005646f2393e8ea9c 416 Gene3D G3DSA:3.40.605.10 6 221 3.8E-98 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 BV404_RS02830 3b7b253fb189646005646f2393e8ea9c 416 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 2 415 39.0 T 09-03-2017 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BV404_RS02830 3b7b253fb189646005646f2393e8ea9c 416 SUPERFAMILY SSF53720 5 408 2.09E-111 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 BV404_RS02830 3b7b253fb189646005646f2393e8ea9c 416 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 10 405 1.2E-166 T 09-03-2017 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BV404_RS01890 92350ade1cdb272ec41dbc2c5bb84edb 757 SUPERFAMILY SSF101904 499 743 3.4E-51 T 09-03-2017 BV404_RS01890 92350ade1cdb272ec41dbc2c5bb84edb 757 Gene3D G3DSA:3.30.1360.40 240 333 3.8E-25 T 09-03-2017 IPR024946 Arginine repressor C-terminal-like domain BV404_RS01890 92350ade1cdb272ec41dbc2c5bb84edb 757 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 10 744 0.0 T 09-03-2017 BV404_RS01890 92350ade1cdb272ec41dbc2c5bb84edb 757 SUPERFAMILY SSF56719 33 485 3.27E-154 T 09-03-2017 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 BV404_RS01890 92350ade1cdb272ec41dbc2c5bb84edb 757 SMART SM00434 13 463 5.6E-232 T 09-03-2017 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BV404_RS01890 92350ade1cdb272ec41dbc2c5bb84edb 757 Gene3D G3DSA:2.120.10.90 498 736 9.3E-28 T 09-03-2017 BV404_RS01890 92350ade1cdb272ec41dbc2c5bb84edb 757 Gene3D G3DSA:3.90.199.10 32 239 5.6E-106 T 09-03-2017 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 BV404_RS01890 92350ade1cdb272ec41dbc2c5bb84edb 757 Gene3D G3DSA:3.90.199.10 335 399 5.6E-106 T 09-03-2017 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 BV404_RS01890 92350ade1cdb272ec41dbc2c5bb84edb 757 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 6 745 33.842 T 09-03-2017 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BV404_RS01890 92350ade1cdb272ec41dbc2c5bb84edb 757 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 34 470 1.6E-134 T 09-03-2017 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BV404_RS01890 92350ade1cdb272ec41dbc2c5bb84edb 757 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 647 693 1.2E-8 T 09-03-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BV404_RS01890 92350ade1cdb272ec41dbc2c5bb84edb 757 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 600 641 0.0081 T 09-03-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BV404_RS06725 96a7329bd9ce2a3d283608a5434da30f 278 SUPERFAMILY SSF46689 228 274 6.27E-8 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS06725 96a7329bd9ce2a3d283608a5434da30f 278 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 228 269 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BV404_RS06725 96a7329bd9ce2a3d283608a5434da30f 278 SUPERFAMILY SSF46689 175 225 1.37E-11 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS06725 96a7329bd9ce2a3d283608a5434da30f 278 Pfam PF02311 AraC-like ligand binding domain 24 150 7.9E-16 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 BV404_RS06725 96a7329bd9ce2a3d283608a5434da30f 278 Pfam PF12833 Helix-turn-helix domain 197 273 4.5E-21 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BV404_RS06725 96a7329bd9ce2a3d283608a5434da30f 278 SMART SM00342 191 273 1.0E-26 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BV404_RS06725 96a7329bd9ce2a3d283608a5434da30f 278 Gene3D G3DSA:2.60.120.280 28 153 4.9E-10 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 BV404_RS06725 96a7329bd9ce2a3d283608a5434da30f 278 SUPERFAMILY SSF51215 27 153 4.18E-15 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 BV404_RS06725 96a7329bd9ce2a3d283608a5434da30f 278 Gene3D G3DSA:1.10.10.60 230 273 7.1E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS06725 96a7329bd9ce2a3d283608a5434da30f 278 Gene3D G3DSA:1.10.10.60 174 229 9.8E-16 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS05655 d2a2e01c106815c1a01bec7217344d85 298 Pfam PF01634 ATP phosphoribosyltransferase 53 218 2.2E-46 T 09-03-2017 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 BV404_RS05655 d2a2e01c106815c1a01bec7217344d85 298 SUPERFAMILY SSF54913 225 297 1.45E-20 T 09-03-2017 IPR011322 Nitrogen regulatory PII-like, alpha/beta BV404_RS05655 d2a2e01c106815c1a01bec7217344d85 298 Pfam PF08029 HisG, C-terminal domain 222 295 4.8E-24 T 09-03-2017 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 BV404_RS05655 d2a2e01c106815c1a01bec7217344d85 298 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 6 196 4.2E-55 T 09-03-2017 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 BV404_RS05655 d2a2e01c106815c1a01bec7217344d85 298 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 155 176 - T 09-03-2017 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 BV404_RS05655 d2a2e01c106815c1a01bec7217344d85 298 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 204 297 5.9E-29 T 09-03-2017 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 BV404_RS05655 d2a2e01c106815c1a01bec7217344d85 298 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 5 298 35.329 T 09-03-2017 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 BV404_RS05655 d2a2e01c106815c1a01bec7217344d85 298 Gene3D G3DSA:3.30.70.120 225 298 5.4E-30 T 09-03-2017 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BV404_RS05655 d2a2e01c106815c1a01bec7217344d85 298 Gene3D G3DSA:3.40.190.10 2 124 2.5E-48 T 09-03-2017 BV404_RS05655 d2a2e01c106815c1a01bec7217344d85 298 Gene3D G3DSA:3.40.190.10 125 206 4.1E-4 T 09-03-2017 BV404_RS05655 d2a2e01c106815c1a01bec7217344d85 298 SUPERFAMILY SSF53850 5 222 1.36E-67 T 09-03-2017 BV404_RS01360 ec4b32a1b4fd0b43a10b9fd980ec6650 458 SMART SM00670 7 141 7.8E-8 T 09-03-2017 IPR002716 PIN domain BV404_RS01360 ec4b32a1b4fd0b43a10b9fd980ec6650 458 Pfam PF02562 PhoH-like protein 248 452 1.5E-54 T 09-03-2017 IPR003714 PhoH-like protein GO:0005524 BV404_RS01360 ec4b32a1b4fd0b43a10b9fd980ec6650 458 SUPERFAMILY SSF52540 247 439 1.75E-28 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS01360 ec4b32a1b4fd0b43a10b9fd980ec6650 458 SUPERFAMILY SSF88723 104 155 4.51E-14 T 09-03-2017 IPR029060 PIN domain-like BV404_RS01360 ec4b32a1b4fd0b43a10b9fd980ec6650 458 SUPERFAMILY SSF88723 7 68 4.51E-14 T 09-03-2017 IPR029060 PIN domain-like BV404_RS01360 ec4b32a1b4fd0b43a10b9fd980ec6650 458 Pfam PF13638 PIN domain 9 150 9.4E-35 T 09-03-2017 IPR002716 PIN domain BV404_RS01360 ec4b32a1b4fd0b43a10b9fd980ec6650 458 Gene3D G3DSA:3.40.50.300 246 456 2.2E-61 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS01360 ec4b32a1b4fd0b43a10b9fd980ec6650 458 Gene3D G3DSA:3.40.50.1010 104 151 2.4E-16 T 09-03-2017 IPR029060 PIN domain-like BV404_RS01360 ec4b32a1b4fd0b43a10b9fd980ec6650 458 Gene3D G3DSA:3.40.50.1010 9 67 2.4E-16 T 09-03-2017 IPR029060 PIN domain-like BV404_RS10830 7e326c52266a81145ebed989b4b16a2b 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.9E-10 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS10830 7e326c52266a81145ebed989b4b16a2b 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.9E-10 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS10830 7e326c52266a81145ebed989b4b16a2b 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.9E-10 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS10830 7e326c52266a81145ebed989b4b16a2b 302 Gene3D G3DSA:1.10.10.10 1 86 3.2E-28 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS10830 7e326c52266a81145ebed989b4b16a2b 302 Pfam PF03466 LysR substrate binding domain 96 292 4.5E-20 T 09-03-2017 IPR005119 LysR, substrate-binding BV404_RS10830 7e326c52266a81145ebed989b4b16a2b 302 Gene3D G3DSA:3.40.190.10 93 182 1.5E-15 T 09-03-2017 BV404_RS10830 7e326c52266a81145ebed989b4b16a2b 302 SUPERFAMILY SSF46785 1 82 9.09E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS10830 7e326c52266a81145ebed989b4b16a2b 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.2E-21 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS10830 7e326c52266a81145ebed989b4b16a2b 302 SUPERFAMILY SSF53850 94 298 2.33E-23 T 09-03-2017 BV404_RS10830 7e326c52266a81145ebed989b4b16a2b 302 Gene3D G3DSA:3.40.190.10 183 263 8.5E-4 T 09-03-2017 BV404_RS00705 9f59403125908b74614921f8e9871c31 877 Pfam PF00311 Phosphoenolpyruvate carboxylase 129 877 1.3E-287 T 09-03-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BV404_RS00705 9f59403125908b74614921f8e9871c31 877 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 09-03-2017 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BV404_RS00705 9f59403125908b74614921f8e9871c31 877 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 535 547 - T 09-03-2017 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BV404_RS00705 9f59403125908b74614921f8e9871c31 877 Gene3D G3DSA:1.20.1440.90 273 387 2.5E-32 T 09-03-2017 BV404_RS00705 9f59403125908b74614921f8e9871c31 877 SUPERFAMILY SSF51621 6 877 0.0 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 BV404_RS00705 9f59403125908b74614921f8e9871c31 877 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 877 17.94 T 09-03-2017 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BV404_RS00705 9f59403125908b74614921f8e9871c31 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 245 260 1.1E-66 T 09-03-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BV404_RS00705 9f59403125908b74614921f8e9871c31 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 384 404 1.1E-66 T 09-03-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BV404_RS00705 9f59403125908b74614921f8e9871c31 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 707 733 1.1E-66 T 09-03-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BV404_RS00705 9f59403125908b74614921f8e9871c31 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 533 553 1.1E-66 T 09-03-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BV404_RS00705 9f59403125908b74614921f8e9871c31 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 575 604 1.1E-66 T 09-03-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BV404_RS00705 9f59403125908b74614921f8e9871c31 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 1.1E-66 T 09-03-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BV404_RS00705 9f59403125908b74614921f8e9871c31 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 1.1E-66 T 09-03-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BV404_RS02260 db75bc16f5c52a2833f45f927a90cf53 901 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 318 900 1.5E-285 T 09-03-2017 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 BV404_RS02260 db75bc16f5c52a2833f45f927a90cf53 901 Gene3D G3DSA:3.40.50.10050 700 779 5.8E-25 T 09-03-2017 IPR023115 Translation initiation factor IF- 2, domain 3 BV404_RS02260 db75bc16f5c52a2833f45f927a90cf53 901 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 61 99 5.2E-16 T 09-03-2017 IPR013575 Initiation factor 2 associated domain, bacterial BV404_RS02260 db75bc16f5c52a2833f45f927a90cf53 901 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 404 558 5.0E-32 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 BV404_RS02260 db75bc16f5c52a2833f45f927a90cf53 901 Pfam PF11987 Translation-initiation factor 2 685 790 2.4E-36 T 09-03-2017 IPR023115 Translation initiation factor IF- 2, domain 3 BV404_RS02260 db75bc16f5c52a2833f45f927a90cf53 901 SUPERFAMILY SSF52540 395 568 3.58E-52 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS02260 db75bc16f5c52a2833f45f927a90cf53 901 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 50 3.1E-9 T 09-03-2017 IPR006847 Translation initiation factor IF-2, N-terminal BV404_RS02260 db75bc16f5c52a2833f45f927a90cf53 901 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 325 375 6.8E-15 T 09-03-2017 IPR006847 Translation initiation factor IF-2, N-terminal BV404_RS02260 db75bc16f5c52a2833f45f927a90cf53 901 Gene3D G3DSA:2.40.30.10 802 898 1.5E-39 T 09-03-2017 BV404_RS02260 db75bc16f5c52a2833f45f927a90cf53 901 Pfam PF00009 Elongation factor Tu GTP binding domain 404 561 2.9E-32 T 09-03-2017 BV404_RS02260 db75bc16f5c52a2833f45f927a90cf53 901 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 898 17.631 T 09-03-2017 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 BV404_RS02260 db75bc16f5c52a2833f45f927a90cf53 901 ProSitePatterns PS01176 Initiation factor 2 signature. 851 873 - T 09-03-2017 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 BV404_RS02260 db75bc16f5c52a2833f45f927a90cf53 901 Gene3D G3DSA:3.30.56.50 2 50 1.2E-23 T 09-03-2017 BV404_RS02260 db75bc16f5c52a2833f45f927a90cf53 901 SUPERFAMILY SSF50447 802 898 4.52E-34 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain BV404_RS02260 db75bc16f5c52a2833f45f927a90cf53 901 SUPERFAMILY SSF50447 573 655 1.08E-24 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain BV404_RS02260 db75bc16f5c52a2833f45f927a90cf53 901 SUPERFAMILY SSF52156 678 807 3.79E-38 T 09-03-2017 IPR023115 Translation initiation factor IF- 2, domain 3 BV404_RS02260 db75bc16f5c52a2833f45f927a90cf53 901 Gene3D G3DSA:3.40.50.300 394 560 7.6E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS02260 db75bc16f5c52a2833f45f927a90cf53 901 Gene3D G3DSA:2.40.30.10 573 664 3.8E-23 T 09-03-2017 BV404_RS02260 db75bc16f5c52a2833f45f927a90cf53 901 SUPERFAMILY SSF46955 3 50 1.03E-12 T 09-03-2017 IPR009061 Putative DNA-binding domain BV404_RS09985 f6676e9102bbb4b8411404ababbe3139 275 Pfam PF00106 short chain dehydrogenase 5 186 1.9E-40 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS09985 f6676e9102bbb4b8411404ababbe3139 275 Gene3D G3DSA:3.40.50.720 3 273 9.4E-62 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS09985 f6676e9102bbb4b8411404ababbe3139 275 SUPERFAMILY SSF51735 3 262 7.8E-58 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS09985 f6676e9102bbb4b8411404ababbe3139 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.9E-17 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS09985 f6676e9102bbb4b8411404ababbe3139 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 1.9E-17 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS09985 f6676e9102bbb4b8411404ababbe3139 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 1.9E-17 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS09985 f6676e9102bbb4b8411404ababbe3139 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 1.9E-17 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS09985 f6676e9102bbb4b8411404ababbe3139 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 1.9E-17 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS09985 f6676e9102bbb4b8411404ababbe3139 275 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BV404_RS04050 a436c9f75ff2486794659da75510c283 333 Gene3D G3DSA:3.20.20.100 11 324 1.3E-95 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain BV404_RS04050 a436c9f75ff2486794659da75510c283 333 Pfam PF00248 Aldo/keto reductase family 12 309 1.0E-66 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain BV404_RS04050 a436c9f75ff2486794659da75510c283 333 SUPERFAMILY SSF51430 10 314 1.13E-84 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain BV404_RS04050 a436c9f75ff2486794659da75510c283 333 PRINTS PR00069 Aldo-keto reductase signature 104 122 7.4E-8 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BV404_RS04050 a436c9f75ff2486794659da75510c283 333 PRINTS PR00069 Aldo-keto reductase signature 39 63 7.4E-8 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BV404_RS04050 a436c9f75ff2486794659da75510c283 333 PRINTS PR00069 Aldo-keto reductase signature 135 152 7.4E-8 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BV404_RS12180 db07931ac7c66ef816ff394d183bfba1 624 SUPERFAMILY SSF103190 206 297 3.22E-17 T 09-03-2017 IPR029151 Periplasmic sensor domain-like BV404_RS12180 db07931ac7c66ef816ff394d183bfba1 624 Pfam PF00990 Diguanylate cyclase, GGDEF domain 465 613 2.9E-38 T 09-03-2017 IPR000160 GGDEF domain BV404_RS12180 db07931ac7c66ef816ff394d183bfba1 624 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 343 459 8.0E-11 T 09-03-2017 IPR000014 PAS domain BV404_RS12180 db07931ac7c66ef816ff394d183bfba1 624 SUPERFAMILY SSF103190 36 205 3.45E-34 T 09-03-2017 IPR029151 Periplasmic sensor domain-like BV404_RS12180 db07931ac7c66ef816ff394d183bfba1 624 Gene3D G3DSA:3.30.450.20 206 300 8.5E-20 T 09-03-2017 BV404_RS12180 db07931ac7c66ef816ff394d183bfba1 624 SMART SM00267 452 617 8.6E-52 T 09-03-2017 IPR000160 GGDEF domain BV404_RS12180 db07931ac7c66ef816ff394d183bfba1 624 Gene3D G3DSA:3.30.450.20 351 464 4.5E-12 T 09-03-2017 BV404_RS12180 db07931ac7c66ef816ff394d183bfba1 624 SUPERFAMILY SSF55073 468 617 3.06E-40 T 09-03-2017 IPR029787 Nucleotide cyclase BV404_RS12180 db07931ac7c66ef816ff394d183bfba1 624 SUPERFAMILY SSF55785 351 461 1.29E-15 T 09-03-2017 IPR000014 PAS domain BV404_RS12180 db07931ac7c66ef816ff394d183bfba1 624 Pfam PF13426 PAS domain 351 451 1.4E-7 T 09-03-2017 IPR000014 PAS domain BV404_RS12180 db07931ac7c66ef816ff394d183bfba1 624 Gene3D G3DSA:3.30.70.270 465 619 1.9E-44 T 09-03-2017 BV404_RS12180 db07931ac7c66ef816ff394d183bfba1 624 Gene3D G3DSA:1.20.5.170 26 71 2.4E-23 T 09-03-2017 BV404_RS12180 db07931ac7c66ef816ff394d183bfba1 624 Gene3D G3DSA:3.30.450.20 75 205 1.3E-28 T 09-03-2017 BV404_RS12180 db07931ac7c66ef816ff394d183bfba1 624 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 461 615 2.3E-42 T 09-03-2017 IPR000160 GGDEF domain BV404_RS02255 a8c74b302936dbf9ef17bad4f80c5575 495 SUPERFAMILY SSF54814 201 278 2.09E-28 T 09-03-2017 IPR009019 K homology domain, prokaryotic type GO:0003723 BV404_RS02255 a8c74b302936dbf9ef17bad4f80c5575 495 Pfam PF13184 NusA-like KH domain 230 297 4.1E-27 T 09-03-2017 IPR025249 KH domain, NusA-like GO:0003723 BV404_RS02255 a8c74b302936dbf9ef17bad4f80c5575 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 1.5E-125 T 09-03-2017 IPR010213 Transcription termination factor NusA GO:0003723 BV404_RS02255 a8c74b302936dbf9ef17bad4f80c5575 495 SUPERFAMILY SSF50249 132 199 8.15E-17 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS02255 a8c74b302936dbf9ef17bad4f80c5575 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 1.2E-21 T 09-03-2017 IPR010214 Transcription termination factor NusA, C-terminal duplication BV404_RS02255 a8c74b302936dbf9ef17bad4f80c5575 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 440 489 4.8E-18 T 09-03-2017 IPR010214 Transcription termination factor NusA, C-terminal duplication BV404_RS02255 a8c74b302936dbf9ef17bad4f80c5575 495 Gene3D G3DSA:1.10.150.20 429 493 1.8E-23 T 09-03-2017 BV404_RS02255 a8c74b302936dbf9ef17bad4f80c5575 495 Gene3D G3DSA:1.10.150.20 357 420 1.2E-21 T 09-03-2017 BV404_RS02255 a8c74b302936dbf9ef17bad4f80c5575 495 SMART SM00316 133 200 3.1E-6 T 09-03-2017 IPR022967 RNA-binding domain, S1 BV404_RS02255 a8c74b302936dbf9ef17bad4f80c5575 495 Gene3D G3DSA:3.30.300.20 199 277 4.9E-33 T 09-03-2017 IPR015946 K homology domain-like, alpha/beta BV404_RS02255 a8c74b302936dbf9ef17bad4f80c5575 495 SUPERFAMILY SSF54814 279 342 3.84E-15 T 09-03-2017 IPR009019 K homology domain, prokaryotic type GO:0003723 BV404_RS02255 a8c74b302936dbf9ef17bad4f80c5575 495 SUPERFAMILY SSF69705 1 126 4.05E-41 T 09-03-2017 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 BV404_RS02255 a8c74b302936dbf9ef17bad4f80c5575 495 Pfam PF14520 Helix-hairpin-helix domain 432 486 4.6E-8 T 09-03-2017 BV404_RS02255 a8c74b302936dbf9ef17bad4f80c5575 495 Pfam PF08529 NusA N-terminal domain 4 123 5.4E-37 T 09-03-2017 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 BV404_RS02255 a8c74b302936dbf9ef17bad4f80c5575 495 SUPERFAMILY SSF47794 349 414 1.35E-16 T 09-03-2017 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 BV404_RS02255 a8c74b302936dbf9ef17bad4f80c5575 495 Gene3D G3DSA:3.30.300.20 278 347 2.7E-27 T 09-03-2017 IPR015946 K homology domain-like, alpha/beta BV404_RS02255 a8c74b302936dbf9ef17bad4f80c5575 495 SUPERFAMILY SSF47794 429 492 1.88E-16 T 09-03-2017 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 BV404_RS02255 a8c74b302936dbf9ef17bad4f80c5575 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 410 29.002 T 09-03-2017 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 BV404_RS02255 a8c74b302936dbf9ef17bad4f80c5575 495 Gene3D G3DSA:2.40.50.140 128 197 2.0E-23 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS02255 a8c74b302936dbf9ef17bad4f80c5575 495 Gene3D G3DSA:3.30.1480.10 1 124 3.2E-45 T 09-03-2017 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 BV404_RS00655 be398cc64218bdca305ad12db097ac2d 120 SUPERFAMILY SSF81343 2 120 3.05E-51 T 09-03-2017 BV404_RS00655 be398cc64218bdca305ad12db097ac2d 120 Gene3D G3DSA:1.20.1300.10 2 120 4.7E-54 T 09-03-2017 BV404_RS00655 be398cc64218bdca305ad12db097ac2d 120 Pfam PF02313 Fumarate reductase subunit D 6 118 8.7E-46 T 09-03-2017 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 BV404_RS00655 be398cc64218bdca305ad12db097ac2d 120 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 2 120 24.955 T 09-03-2017 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 BV404_RS00655 be398cc64218bdca305ad12db097ac2d 120 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 5 116 4.0E-56 T 09-03-2017 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 BV404_RS00655 be398cc64218bdca305ad12db097ac2d 120 PIRSF PIRSF000179 1 120 4.2E-57 T 09-03-2017 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 BV404_RS14750 a2454db631305325ffacfd69f5a393c6 156 ProSitePatterns PS00818 Dps protein family signature 1. 38 54 - T 09-03-2017 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 BV404_RS14750 a2454db631305325ffacfd69f5a393c6 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 62 78 5.3E-14 T 09-03-2017 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 BV404_RS14750 a2454db631305325ffacfd69f5a393c6 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 133 151 5.3E-14 T 09-03-2017 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 BV404_RS14750 a2454db631305325ffacfd69f5a393c6 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 38 54 5.3E-14 T 09-03-2017 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 BV404_RS14750 a2454db631305325ffacfd69f5a393c6 156 SUPERFAMILY SSF47240 2 156 8.65E-44 T 09-03-2017 IPR009078 Ferritin-like superfamily BV404_RS14750 a2454db631305325ffacfd69f5a393c6 156 ProSitePatterns PS00819 Dps protein family signature 2. 64 78 - T 09-03-2017 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 BV404_RS14750 a2454db631305325ffacfd69f5a393c6 156 Pfam PF00210 Ferritin-like domain 19 156 5.8E-26 T 09-03-2017 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 BV404_RS14750 a2454db631305325ffacfd69f5a393c6 156 PIRSF PIRSF005900 1 156 1.0E-43 T 09-03-2017 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 BV404_RS14750 a2454db631305325ffacfd69f5a393c6 156 Gene3D G3DSA:1.20.1260.10 1 156 7.4E-57 T 09-03-2017 IPR012347 Ferritin-related BV404_RS08780 081ffbc5a917502da6c1f41c054d6fa1 357 Gene3D G3DSA:3.30.1150.10 254 356 1.2E-19 T 09-03-2017 BV404_RS08780 081ffbc5a917502da6c1f41c054d6fa1 357 TIGRFAM TIGR02794 tolA_full: protein TolA 12 356 1.4E-83 T 09-03-2017 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 BV404_RS08780 081ffbc5a917502da6c1f41c054d6fa1 357 Pfam PF06519 TolA C-terminal 255 354 7.4E-29 T 09-03-2017 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 BV404_RS08780 081ffbc5a917502da6c1f41c054d6fa1 357 SUPERFAMILY SSF74653 263 357 4.9E-14 T 09-03-2017 BV404_RS11915 84478de520e13c85d4054d4cf84fd9d1 65 Pfam PF02599 Global regulator protein family 1 52 2.1E-26 T 09-03-2017 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 BV404_RS11915 84478de520e13c85d4054d4cf84fd9d1 65 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 58 4.4E-30 T 09-03-2017 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 BV404_RS11915 84478de520e13c85d4054d4cf84fd9d1 65 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 4.0E-20 T 09-03-2017 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 BV404_RS11915 84478de520e13c85d4054d4cf84fd9d1 65 SUPERFAMILY SSF117130 1 54 6.93E-21 T 09-03-2017 BV404_RS11915 84478de520e13c85d4054d4cf84fd9d1 65 Hamap MF_00167 Carbon storage regulator [csrA]. 1 62 20.524 T 09-03-2017 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 BV404_RS07655 a82613c71c89ac56484ee86a29f2a777 397 SUPERFAMILY SSF88697 3 72 1.74E-17 T 09-03-2017 IPR015947 PUA-like domain BV404_RS07655 a82613c71c89ac56484ee86a29f2a777 397 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 110 376 9.9E-30 T 09-03-2017 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 BV404_RS07655 a82613c71c89ac56484ee86a29f2a777 397 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 397 69.204 T 09-03-2017 IPR023542 rRNA large subunit methyltransferase I GO:0008649 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 BV404_RS07655 a82613c71c89ac56484ee86a29f2a777 397 Gene3D G3DSA:3.30.750.80 73 179 8.0E-37 T 09-03-2017 BV404_RS07655 a82613c71c89ac56484ee86a29f2a777 397 SMART SM00359 3 87 1.5E-15 T 09-03-2017 IPR002478 PUA domain GO:0003723 BV404_RS07655 a82613c71c89ac56484ee86a29f2a777 397 Gene3D G3DSA:3.40.50.150 182 396 4.1E-58 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS07655 a82613c71c89ac56484ee86a29f2a777 397 Gene3D G3DSA:2.30.130.10 3 71 2.1E-27 T 09-03-2017 IPR015947 PUA-like domain BV404_RS07655 a82613c71c89ac56484ee86a29f2a777 397 SUPERFAMILY SSF53335 78 393 1.16E-70 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS11140 560c55c65e33a19b935df7d18c2214dd 403 Gene3D G3DSA:3.90.1150.10 283 398 3.6E-25 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 BV404_RS11140 560c55c65e33a19b935df7d18c2214dd 403 PIRSF PIRSF005572 21 402 5.5E-56 T 09-03-2017 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 BV404_RS11140 560c55c65e33a19b935df7d18c2214dd 403 SUPERFAMILY SSF53383 3 400 1.06E-124 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase BV404_RS11140 560c55c65e33a19b935df7d18c2214dd 403 Pfam PF00266 Aminotransferase class-V 24 392 2.8E-147 T 09-03-2017 IPR000192 Aminotransferase class V domain BV404_RS11140 560c55c65e33a19b935df7d18c2214dd 403 Gene3D G3DSA:3.40.640.10 35 282 1.3E-82 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 BV404_RS11140 560c55c65e33a19b935df7d18c2214dd 403 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 4 403 8.9E-154 T 09-03-2017 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 BV404_RS11140 560c55c65e33a19b935df7d18c2214dd 403 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 6 401 8.4E-165 T 09-03-2017 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 BV404_RS05410 71f7c9d28c796641e38e6f5b8915d662 324 Gene3D G3DSA:3.40.50.300 3 255 5.9E-73 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS05410 71f7c9d28c796641e38e6f5b8915d662 324 SMART SM00382 33 239 4.8E-13 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS05410 71f7c9d28c796641e38e6f5b8915d662 324 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 7.7E-18 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BV404_RS05410 71f7c9d28c796641e38e6f5b8915d662 324 Pfam PF00005 ABC transporter 25 181 9.4E-29 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS05410 71f7c9d28c796641e38e6f5b8915d662 324 SUPERFAMILY SSF52540 32 302 4.22E-71 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS05410 71f7c9d28c796641e38e6f5b8915d662 324 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS05410 71f7c9d28c796641e38e6f5b8915d662 324 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 316 1.4E-23 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BV404_RS01640 2a24c12f3be3037b2359577bb5ba466b 573 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 172 8.0E-60 T 09-03-2017 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 BV404_RS01640 2a24c12f3be3037b2359577bb5ba466b 573 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 432 451 - T 09-03-2017 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 BV404_RS01640 2a24c12f3be3037b2359577bb5ba466b 573 Gene3D G3DSA:3.40.50.970 358 557 9.7E-76 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold BV404_RS01640 2a24c12f3be3037b2359577bb5ba466b 573 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 395 544 5.1E-50 T 09-03-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 BV404_RS01640 2a24c12f3be3037b2359577bb5ba466b 573 SUPERFAMILY SSF52467 190 363 8.18E-64 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain BV404_RS01640 2a24c12f3be3037b2359577bb5ba466b 573 Gene3D G3DSA:3.40.50.1220 191 357 2.0E-66 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain BV404_RS01640 2a24c12f3be3037b2359577bb5ba466b 573 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 568 4.3E-275 T 09-03-2017 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 BV404_RS01640 2a24c12f3be3037b2359577bb5ba466b 573 SUPERFAMILY SSF52518 372 566 2.4E-68 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold BV404_RS01640 2a24c12f3be3037b2359577bb5ba466b 573 Gene3D G3DSA:3.40.50.970 3 179 8.8E-77 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold BV404_RS01640 2a24c12f3be3037b2359577bb5ba466b 573 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 197 331 2.9E-46 T 09-03-2017 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 BV404_RS01640 2a24c12f3be3037b2359577bb5ba466b 573 SUPERFAMILY SSF52518 1 182 8.84E-66 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold BV404_RS07390 8eb35ebf58e10ff6ff20c835ee0312c5 278 SMART SM00316 3 64 14.0 T 09-03-2017 IPR022967 RNA-binding domain, S1 BV404_RS07390 8eb35ebf58e10ff6ff20c835ee0312c5 278 SMART SM00316 69 132 8.5 T 09-03-2017 IPR022967 RNA-binding domain, S1 BV404_RS07390 8eb35ebf58e10ff6ff20c835ee0312c5 278 SMART SM00316 145 207 6.1 T 09-03-2017 IPR022967 RNA-binding domain, S1 BV404_RS07390 8eb35ebf58e10ff6ff20c835ee0312c5 278 PIRSF PIRSF012524 1 278 4.1E-100 T 09-03-2017 IPR014464 Conserved virulence factor B BV404_RS07390 8eb35ebf58e10ff6ff20c835ee0312c5 278 Pfam PF13509 S1 domain 71 132 5.8E-5 T 09-03-2017 BV404_RS07390 8eb35ebf58e10ff6ff20c835ee0312c5 278 Pfam PF13509 S1 domain 4 64 1.5E-21 T 09-03-2017 BV404_RS07005 6b403fcdef0590555eb990c2c6fe891c 483 SUPERFAMILY SSF52172 16 199 2.42E-39 T 09-03-2017 IPR011006 CheY-like superfamily BV404_RS07005 6b403fcdef0590555eb990c2c6fe891c 483 SUPERFAMILY SSF46689 424 475 3.32E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS07005 6b403fcdef0590555eb990c2c6fe891c 483 Pfam PF02954 Bacterial regulatory protein, Fis family 433 474 3.4E-8 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BV404_RS07005 6b403fcdef0590555eb990c2c6fe891c 483 Gene3D G3DSA:1.10.10.60 425 474 3.5E-17 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS07005 6b403fcdef0590555eb990c2c6fe891c 483 Gene3D G3DSA:3.40.50.2300 16 144 6.4E-31 T 09-03-2017 BV404_RS07005 6b403fcdef0590555eb990c2c6fe891c 483 SUPERFAMILY SSF52540 155 384 1.75E-67 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS07005 6b403fcdef0590555eb990c2c6fe891c 483 Gene3D G3DSA:1.10.8.60 327 387 9.7E-17 T 09-03-2017 BV404_RS07005 6b403fcdef0590555eb990c2c6fe891c 483 SMART SM00448 16 127 2.7E-29 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS07005 6b403fcdef0590555eb990c2c6fe891c 483 Gene3D G3DSA:3.40.50.300 153 326 1.5E-55 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS07005 6b403fcdef0590555eb990c2c6fe891c 483 Pfam PF00072 Response regulator receiver domain 18 128 4.9E-24 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS07005 6b403fcdef0590555eb990c2c6fe891c 483 SMART SM00382 175 318 4.9E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS07005 6b403fcdef0590555eb990c2c6fe891c 483 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 240 255 - T 09-03-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BV404_RS07005 6b403fcdef0590555eb990c2c6fe891c 483 Pfam PF00158 Sigma-54 interaction domain 155 320 8.8E-69 T 09-03-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BV404_RS07005 6b403fcdef0590555eb990c2c6fe891c 483 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 367 376 - T 09-03-2017 IPR025944 Sigma-54 interaction domain, conserved site BV404_RS07005 6b403fcdef0590555eb990c2c6fe891c 483 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 179 192 - T 09-03-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BV404_RS08175 8448254708b1a05522db3b8c1fcdbfaf 400 Pfam PF01979 Amidohydrolase family 56 373 2.9E-16 T 09-03-2017 IPR006680 Amidohydrolase-related GO:0016787 BV404_RS08175 8448254708b1a05522db3b8c1fcdbfaf 400 Hamap MF_00372 Imidazolonepropionase [hutI]. 2 398 41.33 T 09-03-2017 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BV404_RS08175 8448254708b1a05522db3b8c1fcdbfaf 400 Gene3D G3DSA:2.30.40.10 344 379 4.1E-6 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 BV404_RS08175 8448254708b1a05522db3b8c1fcdbfaf 400 Gene3D G3DSA:2.30.40.10 1 70 6.5E-19 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 BV404_RS08175 8448254708b1a05522db3b8c1fcdbfaf 400 SUPERFAMILY SSF51556 59 358 1.33E-83 T 09-03-2017 IPR032466 Metal-dependent hydrolase BV404_RS08175 8448254708b1a05522db3b8c1fcdbfaf 400 SUPERFAMILY SSF51338 1 59 7.97E-26 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 BV404_RS08175 8448254708b1a05522db3b8c1fcdbfaf 400 SUPERFAMILY SSF51338 360 399 7.97E-26 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 BV404_RS08175 8448254708b1a05522db3b8c1fcdbfaf 400 TIGRFAM TIGR01224 hutI: imidazolonepropionase 24 396 4.1E-154 T 09-03-2017 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BV404_RS08175 8448254708b1a05522db3b8c1fcdbfaf 400 Gene3D G3DSA:3.20.20.140 71 343 1.7E-41 T 09-03-2017 BV404_RS02565 ca95f78d384e9e22c45b0f46f794af53 482 Pfam PF01464 Transglycosylase SLT domain 306 417 6.0E-17 T 09-03-2017 IPR008258 Transglycosylase SLT domain 1 BV404_RS02565 ca95f78d384e9e22c45b0f46f794af53 482 Gene3D G3DSA:3.40.190.10 236 270 2.4E-20 T 09-03-2017 BV404_RS02565 ca95f78d384e9e22c45b0f46f794af53 482 Gene3D G3DSA:3.40.190.10 41 123 2.4E-20 T 09-03-2017 BV404_RS02565 ca95f78d384e9e22c45b0f46f794af53 482 Gene3D G3DSA:3.40.190.10 124 218 7.4E-5 T 09-03-2017 BV404_RS02565 ca95f78d384e9e22c45b0f46f794af53 482 Gene3D G3DSA:1.10.530.10 299 459 5.1E-37 T 09-03-2017 BV404_RS02565 ca95f78d384e9e22c45b0f46f794af53 482 SMART SM00062 45 281 9.0E-5 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BV404_RS02565 ca95f78d384e9e22c45b0f46f794af53 482 SUPERFAMILY SSF53955 267 455 1.54E-34 T 09-03-2017 IPR023346 Lysozyme-like domain BV404_RS02565 ca95f78d384e9e22c45b0f46f794af53 482 SUPERFAMILY SSF53850 44 281 1.79E-30 T 09-03-2017 BV404_RS02565 ca95f78d384e9e22c45b0f46f794af53 482 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 47 269 4.1E-23 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BV404_RS02075 b008fa040dd479deeca3778e1ef506a8 337 Pfam PF13343 Bacterial extracellular solute-binding protein 73 298 1.7E-17 T 09-03-2017 BV404_RS02075 b008fa040dd479deeca3778e1ef506a8 337 Gene3D G3DSA:3.40.190.10 268 310 1.8E-28 T 09-03-2017 BV404_RS02075 b008fa040dd479deeca3778e1ef506a8 337 Gene3D G3DSA:3.40.190.10 1 119 1.8E-28 T 09-03-2017 BV404_RS02075 b008fa040dd479deeca3778e1ef506a8 337 Gene3D G3DSA:3.40.190.10 124 267 1.5E-49 T 09-03-2017 BV404_RS02075 b008fa040dd479deeca3778e1ef506a8 337 PIRSF PIRSF002825 1 337 1.4E-98 T 09-03-2017 IPR026045 Ferric binding protein BV404_RS02075 b008fa040dd479deeca3778e1ef506a8 337 SUPERFAMILY SSF53850 23 334 1.18E-72 T 09-03-2017 BV404_RS02785 856cba106f99f640dae66e3bd0032658 475 Gene3D G3DSA:3.40.309.10 263 445 5.0E-71 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 BV404_RS02785 856cba106f99f640dae66e3bd0032658 475 Gene3D G3DSA:3.40.605.10 15 262 1.4E-92 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 BV404_RS02785 856cba106f99f640dae66e3bd0032658 475 SUPERFAMILY SSF53720 16 473 1.26E-161 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 BV404_RS02785 856cba106f99f640dae66e3bd0032658 475 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 23 468 3.6E-199 T 09-03-2017 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 BV404_RS02785 856cba106f99f640dae66e3bd0032658 475 Pfam PF00171 Aldehyde dehydrogenase family 18 469 1.6E-165 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 BV404_RS02785 856cba106f99f640dae66e3bd0032658 475 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 09-03-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 BV404_RS02785 856cba106f99f640dae66e3bd0032658 475 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 09-03-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 BV404_RS04610 4be6cbed3863c355682597f9b696b5c3 330 SUPERFAMILY SSF103088 154 274 1.83E-17 T 09-03-2017 IPR006665 OmpA-like domain BV404_RS04610 4be6cbed3863c355682597f9b696b5c3 330 Pfam PF00691 OmpA family 170 265 5.7E-11 T 09-03-2017 IPR006665 OmpA-like domain BV404_RS04610 4be6cbed3863c355682597f9b696b5c3 330 Gene3D G3DSA:3.30.1330.60 146 274 1.8E-16 T 09-03-2017 IPR006665 OmpA-like domain BV404_RS04610 4be6cbed3863c355682597f9b696b5c3 330 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 13 63 8.9E-16 T 09-03-2017 IPR025713 Motility protein B, N-terminal domain BV404_RS11475 c79bf0538fd07f2f7f2ab2337ddcea57 125 Gene3D G3DSA:3.20.70.20 59 124 2.2E-33 T 09-03-2017 BV404_RS11475 c79bf0538fd07f2f7f2ab2337ddcea57 125 SUPERFAMILY SSF51998 64 124 1.83E-23 T 09-03-2017 BV404_RS11475 c79bf0538fd07f2f7f2ab2337ddcea57 125 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 125 8.0E-69 T 09-03-2017 IPR011140 Autonomous glycyl radical cofactor GrcA BV404_RS11475 c79bf0538fd07f2f7f2ab2337ddcea57 125 PIRSF PIRSF000378 2 125 2.9E-53 T 09-03-2017 IPR011140 Autonomous glycyl radical cofactor GrcA BV404_RS11475 c79bf0538fd07f2f7f2ab2337ddcea57 125 ProSitePatterns PS00850 Glycine radical domain signature. 95 103 - T 09-03-2017 IPR019777 Formate C-acetyltransferase glycine radical, conserved site BV404_RS11475 c79bf0538fd07f2f7f2ab2337ddcea57 125 Pfam PF01228 Glycine radical 15 106 2.4E-22 T 09-03-2017 IPR001150 Glycine radical domain GO:0003824|GO:0008152 BV404_RS11475 c79bf0538fd07f2f7f2ab2337ddcea57 125 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 125 40.076 T 09-03-2017 IPR011140 Autonomous glycyl radical cofactor GrcA BV404_RS07610 f9ff21f52d90c2a953ec2ef353109ee4 274 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 09-03-2017 IPR000150 Cof protein GO:0016787 BV404_RS07610 f9ff21f52d90c2a953ec2ef353109ee4 274 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 262 2.0E-66 T 09-03-2017 IPR023214 HAD-like domain BV404_RS07610 f9ff21f52d90c2a953ec2ef353109ee4 274 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 262 8.9E-63 T 09-03-2017 IPR000150 Cof protein GO:0016787 BV404_RS07610 f9ff21f52d90c2a953ec2ef353109ee4 274 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 235 5.6E-28 T 09-03-2017 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 BV404_RS07610 f9ff21f52d90c2a953ec2ef353109ee4 274 Gene3D G3DSA:3.30.1240.10 87 180 8.4E-32 T 09-03-2017 BV404_RS07610 f9ff21f52d90c2a953ec2ef353109ee4 274 SUPERFAMILY SSF56784 1 266 7.65E-74 T 09-03-2017 IPR023214 HAD-like domain BV404_RS07610 f9ff21f52d90c2a953ec2ef353109ee4 274 Gene3D G3DSA:3.40.50.1000 1 75 5.6E-57 T 09-03-2017 IPR023214 HAD-like domain BV404_RS07610 f9ff21f52d90c2a953ec2ef353109ee4 274 Gene3D G3DSA:3.40.50.1000 181 268 5.6E-57 T 09-03-2017 IPR023214 HAD-like domain BV404_RS07610 f9ff21f52d90c2a953ec2ef353109ee4 274 ProSitePatterns PS01229 Hypothetical cof family signature 2. 216 238 - T 09-03-2017 BV404_RS03440 cc60886eba03784fa77ef95f755dc428 623 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 434 621 1.4E-46 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 BV404_RS03440 cc60886eba03784fa77ef95f755dc428 623 SUPERFAMILY SSF58104 314 621 5.62E-73 T 09-03-2017 BV404_RS03440 cc60886eba03784fa77ef95f755dc428 623 Pfam PF00672 HAMP domain 273 343 9.7E-13 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 BV404_RS03440 cc60886eba03784fa77ef95f755dc428 623 Gene3D G3DSA:3.30.450.20 139 270 1.0E-32 T 09-03-2017 BV404_RS03440 cc60886eba03784fa77ef95f755dc428 623 Gene3D G3DSA:1.10.287.950 376 593 1.0E-55 T 09-03-2017 BV404_RS03440 cc60886eba03784fa77ef95f755dc428 623 SMART SM00304 374 441 47.0 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 BV404_RS03440 cc60886eba03784fa77ef95f755dc428 623 SMART SM00304 292 346 1.3E-9 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 BV404_RS03440 cc60886eba03784fa77ef95f755dc428 623 SUPERFAMILY SSF103190 52 184 1.83E-17 T 09-03-2017 IPR029151 Periplasmic sensor domain-like BV404_RS03440 cc60886eba03784fa77ef95f755dc428 623 SMART SM00283 361 622 5.3E-72 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 BV404_RS03440 cc60886eba03784fa77ef95f755dc428 623 Pfam PF02743 Cache domain 35 254 3.4E-31 T 09-03-2017 IPR033479 Double Cache domain 1 BV404_RS08910 b1b7aa9fd54ac5a720a3fc78ae27a437 256 PIRSF PIRSF039085 3 256 7.9E-119 T 09-03-2017 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 BV404_RS08910 b1b7aa9fd54ac5a720a3fc78ae27a437 256 SMART SM00382 31 229 5.6E-15 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS08910 b1b7aa9fd54ac5a720a3fc78ae27a437 256 Gene3D G3DSA:3.40.50.300 6 253 5.0E-80 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS08910 b1b7aa9fd54ac5a720a3fc78ae27a437 256 SUPERFAMILY SSF52540 7 251 3.17E-75 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS08910 b1b7aa9fd54ac5a720a3fc78ae27a437 256 Pfam PF00005 ABC transporter 22 181 2.6E-32 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS08910 b1b7aa9fd54ac5a720a3fc78ae27a437 256 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS14155 2d92407082ae5b02b586e97e41b1f907 45 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 3 43 6.0E-15 T 09-03-2017 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS14155 2d92407082ae5b02b586e97e41b1f907 45 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 3 44 3.1E-25 T 09-03-2017 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS14155 2d92407082ae5b02b586e97e41b1f907 45 Pfam PF00468 Ribosomal protein L34 3 44 1.2E-23 T 09-03-2017 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS14155 2d92407082ae5b02b586e97e41b1f907 45 ProSitePatterns PS00784 Ribosomal protein L34 signature. 3 22 - T 09-03-2017 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS14155 2d92407082ae5b02b586e97e41b1f907 45 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 2 45 16.276 T 09-03-2017 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS13765 f939914932b60813ef75d6c7d6a02956 451 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 09-03-2017 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 BV404_RS13765 f939914932b60813ef75d6c7d6a02956 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 2.6E-28 T 09-03-2017 BV404_RS13765 f939914932b60813ef75d6c7d6a02956 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 2.6E-28 T 09-03-2017 BV404_RS13765 f939914932b60813ef75d6c7d6a02956 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.6E-28 T 09-03-2017 BV404_RS13765 f939914932b60813ef75d6c7d6a02956 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 2.6E-28 T 09-03-2017 BV404_RS13765 f939914932b60813ef75d6c7d6a02956 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 2.6E-28 T 09-03-2017 BV404_RS13765 f939914932b60813ef75d6c7d6a02956 451 Gene3D G3DSA:3.50.50.60 139 327 6.6E-50 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS13765 f939914932b60813ef75d6c7d6a02956 451 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 340 450 1.9E-31 T 09-03-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 BV404_RS13765 f939914932b60813ef75d6c7d6a02956 451 SUPERFAMILY SSF55424 337 451 9.45E-34 T 09-03-2017 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 BV404_RS13765 f939914932b60813ef75d6c7d6a02956 451 Gene3D G3DSA:3.30.390.30 340 451 1.8E-40 T 09-03-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 BV404_RS13765 f939914932b60813ef75d6c7d6a02956 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 4.3E-65 T 09-03-2017 BV404_RS13765 f939914932b60813ef75d6c7d6a02956 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 4.3E-65 T 09-03-2017 BV404_RS13765 f939914932b60813ef75d6c7d6a02956 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 4.3E-65 T 09-03-2017 BV404_RS13765 f939914932b60813ef75d6c7d6a02956 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 4.3E-65 T 09-03-2017 BV404_RS13765 f939914932b60813ef75d6c7d6a02956 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 425 445 4.3E-65 T 09-03-2017 BV404_RS13765 f939914932b60813ef75d6c7d6a02956 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 4.3E-65 T 09-03-2017 BV404_RS13765 f939914932b60813ef75d6c7d6a02956 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 4.3E-65 T 09-03-2017 BV404_RS13765 f939914932b60813ef75d6c7d6a02956 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 336 357 4.3E-65 T 09-03-2017 BV404_RS13765 f939914932b60813ef75d6c7d6a02956 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 403 418 4.3E-65 T 09-03-2017 BV404_RS13765 f939914932b60813ef75d6c7d6a02956 451 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 319 1.3E-69 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS13765 f939914932b60813ef75d6c7d6a02956 451 Gene3D G3DSA:3.50.50.60 2 138 4.4E-47 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS13765 f939914932b60813ef75d6c7d6a02956 451 PIRSF PIRSF000350 1 445 2.1E-80 T 09-03-2017 BV404_RS13765 f939914932b60813ef75d6c7d6a02956 451 SUPERFAMILY SSF51905 1 360 5.76E-56 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS13765 f939914932b60813ef75d6c7d6a02956 451 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 4 451 2.2E-211 T 09-03-2017 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 BV404_RS07235 ff8a84ee30e7c35f00defd7a7e6f06ea 357 Gene3D G3DSA:3.40.50.300 3 150 1.1E-18 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS07235 ff8a84ee30e7c35f00defd7a7e6f06ea 357 Pfam PF05707 Zonular occludens toxin (Zot) 3 164 1.3E-32 T 09-03-2017 IPR008900 Zona occludens toxin BV404_RS07235 ff8a84ee30e7c35f00defd7a7e6f06ea 357 SUPERFAMILY SSF52540 3 133 7.99E-7 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS02310 22487c56aa7226051eb21f8167038da1 681 SMART SM00267 242 410 3.2E-59 T 09-03-2017 IPR000160 GGDEF domain BV404_RS02310 22487c56aa7226051eb21f8167038da1 681 SUPERFAMILY SSF55073 258 412 9.42E-47 T 09-03-2017 IPR029787 Nucleotide cyclase BV404_RS02310 22487c56aa7226051eb21f8167038da1 681 SUPERFAMILY SSF141868 427 675 3.66E-85 T 09-03-2017 IPR001633 EAL domain BV404_RS02310 22487c56aa7226051eb21f8167038da1 681 Pfam PF13188 PAS domain 132 178 1.0E-4 T 09-03-2017 IPR000014 PAS domain BV404_RS02310 22487c56aa7226051eb21f8167038da1 681 Gene3D G3DSA:3.20.20.450 424 674 2.0E-93 T 09-03-2017 IPR001633 EAL domain BV404_RS02310 22487c56aa7226051eb21f8167038da1 681 Pfam PF08448 PAS fold 15 119 1.0E-9 T 09-03-2017 IPR013656 PAS fold-4 BV404_RS02310 22487c56aa7226051eb21f8167038da1 681 Gene3D G3DSA:3.30.450.20 124 189 2.8E-6 T 09-03-2017 BV404_RS02310 22487c56aa7226051eb21f8167038da1 681 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 8 120 1.1E-9 T 09-03-2017 IPR000014 PAS domain BV404_RS02310 22487c56aa7226051eb21f8167038da1 681 Pfam PF00990 Diguanylate cyclase, GGDEF domain 254 406 8.0E-43 T 09-03-2017 IPR000160 GGDEF domain BV404_RS02310 22487c56aa7226051eb21f8167038da1 681 SMART SM00052 420 666 1.9E-107 T 09-03-2017 IPR001633 EAL domain BV404_RS02310 22487c56aa7226051eb21f8167038da1 681 SUPERFAMILY SSF55785 118 189 6.09E-6 T 09-03-2017 IPR000014 PAS domain BV404_RS02310 22487c56aa7226051eb21f8167038da1 681 SMART SM00091 131 198 9.4 T 09-03-2017 IPR000014 PAS domain BV404_RS02310 22487c56aa7226051eb21f8167038da1 681 SMART SM00091 8 74 2.8E-5 T 09-03-2017 IPR000014 PAS domain BV404_RS02310 22487c56aa7226051eb21f8167038da1 681 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 254 407 1.9E-36 T 09-03-2017 IPR000160 GGDEF domain BV404_RS02310 22487c56aa7226051eb21f8167038da1 681 Gene3D G3DSA:3.30.70.270 255 418 1.8E-52 T 09-03-2017 BV404_RS02310 22487c56aa7226051eb21f8167038da1 681 SUPERFAMILY SSF55785 7 115 4.76E-12 T 09-03-2017 IPR000014 PAS domain BV404_RS02310 22487c56aa7226051eb21f8167038da1 681 Gene3D G3DSA:3.30.450.20 16 115 1.1E-11 T 09-03-2017 BV404_RS02310 22487c56aa7226051eb21f8167038da1 681 Pfam PF00563 EAL domain 427 661 6.8E-73 T 09-03-2017 IPR001633 EAL domain BV404_RS10110 3abb511c069545d170b999714b827e7a 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 24.333 T 09-03-2017 IPR004394 Protein Iojap/ribosomal silencing factor RsfS BV404_RS10110 3abb511c069545d170b999714b827e7a 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 5.1E-38 T 09-03-2017 IPR004394 Protein Iojap/ribosomal silencing factor RsfS BV404_RS10110 3abb511c069545d170b999714b827e7a 105 Gene3D G3DSA:3.30.460.10 3 105 1.2E-37 T 09-03-2017 BV404_RS10110 3abb511c069545d170b999714b827e7a 105 SUPERFAMILY SSF81301 3 105 5.07E-37 T 09-03-2017 BV404_RS10110 3abb511c069545d170b999714b827e7a 105 Pfam PF02410 Ribosomal silencing factor during starvation 11 104 4.3E-27 T 09-03-2017 BV404_RS01375 d7af6880496cecbe6a65e7556fbd8d79 276 Gene3D G3DSA:3.30.420.10 116 269 1.5E-33 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 BV404_RS01375 d7af6880496cecbe6a65e7556fbd8d79 276 Pfam PF00665 Integrase core domain 118 231 1.4E-25 T 09-03-2017 IPR001584 Integrase, catalytic core GO:0015074 BV404_RS01375 d7af6880496cecbe6a65e7556fbd8d79 276 SUPERFAMILY SSF53098 116 271 4.1E-35 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 BV404_RS00505 d7af6880496cecbe6a65e7556fbd8d79 276 Gene3D G3DSA:3.30.420.10 116 269 1.5E-33 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 BV404_RS00505 d7af6880496cecbe6a65e7556fbd8d79 276 Pfam PF00665 Integrase core domain 118 231 1.4E-25 T 09-03-2017 IPR001584 Integrase, catalytic core GO:0015074 BV404_RS00505 d7af6880496cecbe6a65e7556fbd8d79 276 SUPERFAMILY SSF53098 116 271 4.1E-35 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 BV404_RS03860 d7af6880496cecbe6a65e7556fbd8d79 276 Gene3D G3DSA:3.30.420.10 116 269 1.5E-33 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 BV404_RS03860 d7af6880496cecbe6a65e7556fbd8d79 276 Pfam PF00665 Integrase core domain 118 231 1.4E-25 T 09-03-2017 IPR001584 Integrase, catalytic core GO:0015074 BV404_RS03860 d7af6880496cecbe6a65e7556fbd8d79 276 SUPERFAMILY SSF53098 116 271 4.1E-35 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 BV404_RS14455 d7af6880496cecbe6a65e7556fbd8d79 276 Gene3D G3DSA:3.30.420.10 116 269 1.5E-33 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 BV404_RS14455 d7af6880496cecbe6a65e7556fbd8d79 276 Pfam PF00665 Integrase core domain 118 231 1.4E-25 T 09-03-2017 IPR001584 Integrase, catalytic core GO:0015074 BV404_RS14455 d7af6880496cecbe6a65e7556fbd8d79 276 SUPERFAMILY SSF53098 116 271 4.1E-35 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 BV404_RS01355 f023f2a9f53b484b70f76869b38163f1 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 157 330 6.6E-55 T 09-03-2017 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 BV404_RS01355 f023f2a9f53b484b70f76869b38163f1 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 332 3.7E-132 T 09-03-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BV404_RS01355 f023f2a9f53b484b70f76869b38163f1 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BV404_RS01355 f023f2a9f53b484b70f76869b38163f1 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 3.1E-25 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BV404_RS01355 f023f2a9f53b484b70f76869b38163f1 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 3.1E-25 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BV404_RS01355 f023f2a9f53b484b70f76869b38163f1 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 3.1E-25 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BV404_RS01355 f023f2a9f53b484b70f76869b38163f1 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 3.1E-25 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BV404_RS01355 f023f2a9f53b484b70f76869b38163f1 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 333 81.796 T 09-03-2017 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 BV404_RS01355 f023f2a9f53b484b70f76869b38163f1 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 3.1E-45 T 09-03-2017 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 BV404_RS01355 f023f2a9f53b484b70f76869b38163f1 334 Gene3D G3DSA:3.40.50.1370 144 319 1.2E-72 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BV404_RS01355 f023f2a9f53b484b70f76869b38163f1 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 4.1E-32 T 09-03-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BV404_RS01355 f023f2a9f53b484b70f76869b38163f1 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 4.1E-32 T 09-03-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BV404_RS01355 f023f2a9f53b484b70f76869b38163f1 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 4.1E-32 T 09-03-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BV404_RS01355 f023f2a9f53b484b70f76869b38163f1 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 4.1E-32 T 09-03-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BV404_RS01355 f023f2a9f53b484b70f76869b38163f1 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 230 240 4.1E-32 T 09-03-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BV404_RS01355 f023f2a9f53b484b70f76869b38163f1 334 Gene3D G3DSA:3.40.50.1370 5 143 6.0E-55 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BV404_RS01355 f023f2a9f53b484b70f76869b38163f1 334 SUPERFAMILY SSF53671 4 333 3.54E-97 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BV404_RS00235 6523895d77d6c2f87af938fe81bd6f41 193 Gene3D G3DSA:3.55.40.10 37 190 1.2E-45 T 09-03-2017 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 BV404_RS00235 6523895d77d6c2f87af938fe81bd6f41 193 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site BV404_RS00235 6523895d77d6c2f87af938fe81bd6f41 193 Pfam PF12019 Type II transport protein GspH 42 179 1.6E-9 T 09-03-2017 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 BV404_RS00235 6523895d77d6c2f87af938fe81bd6f41 193 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 4 183 2.4E-13 T 09-03-2017 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 BV404_RS00235 6523895d77d6c2f87af938fe81bd6f41 193 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 4.6E-6 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site BV404_RS00235 6523895d77d6c2f87af938fe81bd6f41 193 SUPERFAMILY SSF54523 7 110 3.3E-7 T 09-03-2017 BV404_RS00235 6523895d77d6c2f87af938fe81bd6f41 193 PRINTS PR00885 Bacterial general secretion pathway protein H signature 17 31 4.2E-21 T 09-03-2017 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 BV404_RS00235 6523895d77d6c2f87af938fe81bd6f41 193 PRINTS PR00885 Bacterial general secretion pathway protein H signature 2 16 4.2E-21 T 09-03-2017 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 BV404_RS00235 6523895d77d6c2f87af938fe81bd6f41 193 PRINTS PR00885 Bacterial general secretion pathway protein H signature 143 158 4.2E-21 T 09-03-2017 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 BV404_RS02590 780ffd41b563caef0a8a98ef2b42f16c 328 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 190 296 6.1E-16 T 09-03-2017 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 BV404_RS02590 780ffd41b563caef0a8a98ef2b42f16c 328 SUPERFAMILY SSF51197 24 327 1.03E-73 T 09-03-2017 BV404_RS02590 780ffd41b563caef0a8a98ef2b42f16c 328 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 29 125 4.4E-21 T 09-03-2017 IPR026992 Non-haem dioxygenase N-terminal domain BV404_RS02590 780ffd41b563caef0a8a98ef2b42f16c 328 Gene3D G3DSA:2.60.120.330 26 327 5.1E-75 T 09-03-2017 IPR027443 Isopenicillin N synthase-like BV404_RS13670 a266c5359be1a2bdddd43c7085203113 657 SUPERFAMILY SSF81345 351 649 2.22E-61 T 09-03-2017 IPR029022 ABC transporter, BtuC-like BV404_RS13670 a266c5359be1a2bdddd43c7085203113 657 SUPERFAMILY SSF81345 11 323 2.62E-54 T 09-03-2017 IPR029022 ABC transporter, BtuC-like BV404_RS13670 a266c5359be1a2bdddd43c7085203113 657 Pfam PF01032 FecCD transport family 13 323 1.9E-59 T 09-03-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 BV404_RS13670 a266c5359be1a2bdddd43c7085203113 657 Pfam PF01032 FecCD transport family 379 650 2.0E-66 T 09-03-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 BV404_RS13670 a266c5359be1a2bdddd43c7085203113 657 Gene3D G3DSA:1.10.3470.10 358 653 8.3E-71 T 09-03-2017 IPR029022 ABC transporter, BtuC-like BV404_RS13670 a266c5359be1a2bdddd43c7085203113 657 Gene3D G3DSA:1.10.3470.10 6 324 8.6E-62 T 09-03-2017 IPR029022 ABC transporter, BtuC-like BV404_RS09730 1ef847135c46b521f0ad8e4405a4a67a 353 Pfam PF07646 Kelch motif 257 312 9.5E-7 T 09-03-2017 IPR011498 Kelch repeat type 2 GO:0005515 BV404_RS09730 1ef847135c46b521f0ad8e4405a4a67a 353 Pfam PF07646 Kelch motif 61 106 6.2E-5 T 09-03-2017 IPR011498 Kelch repeat type 2 GO:0005515 BV404_RS09730 1ef847135c46b521f0ad8e4405a4a67a 353 SUPERFAMILY SSF117281 8 137 8.11E-20 T 09-03-2017 BV404_RS09730 1ef847135c46b521f0ad8e4405a4a67a 353 SUPERFAMILY SSF117281 174 231 8.11E-20 T 09-03-2017 BV404_RS09730 1ef847135c46b521f0ad8e4405a4a67a 353 TIGRFAM TIGR03547 muta_rot_YjhT: mutatrotase, YjhT family 10 352 9.1E-122 T 09-03-2017 IPR019936 Mutatrotase, YjhT-like BV404_RS09730 1ef847135c46b521f0ad8e4405a4a67a 353 Gene3D G3DSA:2.120.10.80 174 222 7.6E-17 T 09-03-2017 IPR015915 Kelch-type beta propeller GO:0005515 BV404_RS09730 1ef847135c46b521f0ad8e4405a4a67a 353 Gene3D G3DSA:2.120.10.80 10 137 7.6E-17 T 09-03-2017 IPR015915 Kelch-type beta propeller GO:0005515 BV404_RS11405 130a790d352d6be40d8171745c287df0 259 SMART SM01133 10 245 9.1E-80 T 09-03-2017 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-71336 BV404_RS11405 130a790d352d6be40d8171745c287df0 259 Pfam PF01791 DeoC/LacD family aldolase 11 240 1.5E-47 T 09-03-2017 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-71336 BV404_RS11405 130a790d352d6be40d8171745c287df0 259 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 231 4.4E-80 T 09-03-2017 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-71336 BV404_RS11405 130a790d352d6be40d8171745c287df0 259 PIRSF PIRSF001357 5 253 1.6E-76 T 09-03-2017 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-71336 BV404_RS11405 130a790d352d6be40d8171745c287df0 259 Gene3D G3DSA:3.20.20.70 3 249 1.1E-91 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS11405 130a790d352d6be40d8171745c287df0 259 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 259 53.119 T 09-03-2017 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 BV404_RS11405 130a790d352d6be40d8171745c287df0 259 SUPERFAMILY SSF51569 6 246 2.41E-82 T 09-03-2017 BV404_RS11470 a0a98c6dfc96831435349e03e35981e1 292 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 78 86 - T 09-03-2017 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 BV404_RS11470 a0a98c6dfc96831435349e03e35981e1 292 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 184 191 - T 09-03-2017 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 BV404_RS11470 a0a98c6dfc96831435349e03e35981e1 292 Pfam PF01261 Xylose isomerase-like TIM barrel 29 248 3.0E-43 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain BV404_RS11470 a0a98c6dfc96831435349e03e35981e1 292 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 224 240 - T 09-03-2017 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 BV404_RS11470 a0a98c6dfc96831435349e03e35981e1 292 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 12 285 1.2E-106 T 09-03-2017 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 BV404_RS11470 a0a98c6dfc96831435349e03e35981e1 292 Hamap MF_00152 Probable endonuclease 4 [nfo]. 11 288 42.98 T 09-03-2017 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 BV404_RS11470 a0a98c6dfc96831435349e03e35981e1 292 SUPERFAMILY SSF51658 12 287 1.83E-101 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain BV404_RS11470 a0a98c6dfc96831435349e03e35981e1 292 SMART SM00518 12 288 1.8E-122 T 09-03-2017 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 BV404_RS11470 a0a98c6dfc96831435349e03e35981e1 292 Gene3D G3DSA:3.20.20.150 11 287 7.3E-122 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain BV404_RS00220 fedb9ebac7201500fe13467ad914176e 503 Gene3D G3DSA:3.40.50.300 231 501 1.5E-102 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS00220 fedb9ebac7201500fe13467ad914176e 503 SUPERFAMILY SSF52540 107 500 2.95E-106 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS00220 fedb9ebac7201500fe13467ad914176e 503 SUPERFAMILY SSF160246 15 81 3.66E-15 T 09-03-2017 BV404_RS00220 fedb9ebac7201500fe13467ad914176e 503 SMART SM00382 256 379 1.5E-5 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS00220 fedb9ebac7201500fe13467ad914176e 503 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 323 337 - T 09-03-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 BV404_RS00220 fedb9ebac7201500fe13467ad914176e 503 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 14 500 9.3E-230 T 09-03-2017 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 BV404_RS00220 fedb9ebac7201500fe13467ad914176e 503 Pfam PF00437 Type II/IV secretion system protein 130 395 4.2E-87 T 09-03-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 BV404_RS00220 fedb9ebac7201500fe13467ad914176e 503 Gene3D G3DSA:3.30.450.90 97 228 7.5E-55 T 09-03-2017 BV404_RS00465 4bd872659f31788bb1deca486c61444c 157 PIRSF PIRSF029256 1 157 1.1E-65 T 09-03-2017 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 BV404_RS00465 4bd872659f31788bb1deca486c61444c 157 SUPERFAMILY SSF75217 2 155 1.9E-43 T 09-03-2017 IPR029028 Alpha/beta knot methyltransferases BV404_RS00465 4bd872659f31788bb1deca486c61444c 157 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 156 1.5E-57 T 09-03-2017 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 BV404_RS00465 4bd872659f31788bb1deca486c61444c 157 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 154 32.586 T 09-03-2017 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 BV404_RS00465 4bd872659f31788bb1deca486c61444c 157 Pfam PF00588 SpoU rRNA Methylase family 3 144 1.7E-34 T 09-03-2017 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 BV404_RS00465 4bd872659f31788bb1deca486c61444c 157 Gene3D G3DSA:3.40.1280.10 1 156 5.1E-64 T 09-03-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BV404_RS04020 39e1da8883dd34414a7e11b196b83314 650 SMART SM00437 284 563 2.8E-90 T 09-03-2017 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 BV404_RS04020 39e1da8883dd34414a7e11b196b83314 650 Pfam PF01131 DNA topoisomerase 159 598 4.1E-116 T 09-03-2017 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BV404_RS04020 39e1da8883dd34414a7e11b196b83314 650 SMART SM00493 2 125 1.9E-27 T 09-03-2017 IPR006171 Toprim domain BV404_RS04020 39e1da8883dd34414a7e11b196b83314 650 Hamap MF_00953 DNA topoisomerase 3 [topB]. 2 647 66.028 T 09-03-2017 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 BV404_RS04020 39e1da8883dd34414a7e11b196b83314 650 Gene3D G3DSA:3.40.50.140 3 154 9.1E-45 T 09-03-2017 IPR006171 Toprim domain BV404_RS04020 39e1da8883dd34414a7e11b196b83314 650 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 99 112 1.2E-26 T 09-03-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 BV404_RS04020 39e1da8883dd34414a7e11b196b83314 650 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 194 212 1.2E-26 T 09-03-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 BV404_RS04020 39e1da8883dd34414a7e11b196b83314 650 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 526 540 1.2E-26 T 09-03-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 BV404_RS04020 39e1da8883dd34414a7e11b196b83314 650 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 327 336 1.2E-26 T 09-03-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 BV404_RS04020 39e1da8883dd34414a7e11b196b83314 650 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 408 424 1.2E-26 T 09-03-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 BV404_RS04020 39e1da8883dd34414a7e11b196b83314 650 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 321 336 - T 09-03-2017 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 BV404_RS04020 39e1da8883dd34414a7e11b196b83314 650 Gene3D G3DSA:1.10.460.10 160 218 5.3E-52 T 09-03-2017 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 BV404_RS04020 39e1da8883dd34414a7e11b196b83314 650 Gene3D G3DSA:1.10.460.10 495 612 5.3E-52 T 09-03-2017 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 BV404_RS04020 39e1da8883dd34414a7e11b196b83314 650 SMART SM00436 129 224 8.7E-30 T 09-03-2017 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 BV404_RS04020 39e1da8883dd34414a7e11b196b83314 650 Pfam PF01751 Toprim domain 4 124 1.1E-15 T 09-03-2017 IPR006171 Toprim domain BV404_RS04020 39e1da8883dd34414a7e11b196b83314 650 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 627 4.9E-237 T 09-03-2017 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 BV404_RS04020 39e1da8883dd34414a7e11b196b83314 650 Gene3D G3DSA:2.70.20.10 219 256 7.5E-43 T 09-03-2017 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 BV404_RS04020 39e1da8883dd34414a7e11b196b83314 650 Gene3D G3DSA:2.70.20.10 374 493 7.5E-43 T 09-03-2017 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 BV404_RS04020 39e1da8883dd34414a7e11b196b83314 650 SUPERFAMILY SSF56712 3 612 1.24E-181 T 09-03-2017 IPR023405 DNA topoisomerase, type IA, core domain BV404_RS00990 8d3b5890e8e7523dc000b83abe171c52 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 102 7.4E-23 T 09-03-2017 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS00990 8d3b5890e8e7523dc000b83abe171c52 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 20.006 T 09-03-2017 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS00990 8d3b5890e8e7523dc000b83abe171c52 105 SUPERFAMILY SSF50104 4 101 1.25E-33 T 09-03-2017 IPR008991 Translation protein SH3-like domain BV404_RS00990 8d3b5890e8e7523dc000b83abe171c52 105 Gene3D G3DSA:2.30.30.30 3 92 5.9E-22 T 09-03-2017 IPR014722 Ribosomal protein L2 domain 2 BV404_RS00990 8d3b5890e8e7523dc000b83abe171c52 105 Pfam PF00467 KOW motif 8 37 2.3E-5 T 09-03-2017 IPR005824 KOW BV404_RS00990 8d3b5890e8e7523dc000b83abe171c52 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 1.7E-39 T 09-03-2017 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS00990 8d3b5890e8e7523dc000b83abe171c52 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 09-03-2017 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS00990 8d3b5890e8e7523dc000b83abe171c52 105 SMART SM00739 4 31 6.1E-4 T 09-03-2017 IPR005824 KOW BV404_RS09815 13994ec4a4d8873dafdad50fac6e5574 230 PIRSF PIRSF006102 1 219 2.7E-77 T 09-03-2017 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 BV404_RS09815 13994ec4a4d8873dafdad50fac6e5574 230 Hamap MF_00478 Electron transport complex subunit RsxE [rsxE]. 1 210 27.989 T 09-03-2017 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 BV404_RS09815 13994ec4a4d8873dafdad50fac6e5574 230 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 6 209 2.1E-89 T 09-03-2017 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 BV404_RS09815 13994ec4a4d8873dafdad50fac6e5574 230 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 200 3.7E-65 T 09-03-2017 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 BV404_RS03115 16c7010bc6cd96d7494ff230bd5c0305 166 SMART SM00014 39 138 1.7E-5 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BV404_RS03115 16c7010bc6cd96d7494ff230bd5c0305 166 SUPERFAMILY SSF48317 14 138 5.23E-25 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BV404_RS03115 16c7010bc6cd96d7494ff230bd5c0305 166 Pfam PF01569 PAP2 superfamily 69 138 1.2E-10 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BV404_RS03115 16c7010bc6cd96d7494ff230bd5c0305 166 Gene3D G3DSA:1.20.144.10 44 133 2.7E-18 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BV404_RS10605 b74eee7c0d181fb5981d5a7719b7a80b 103 Pfam PF04287 tRNA pseudouridine synthase C 9 100 3.2E-33 T 09-03-2017 IPR023376 YqcC-like domain BV404_RS10605 b74eee7c0d181fb5981d5a7719b7a80b 103 SUPERFAMILY SSF158452 5 102 1.7E-34 T 09-03-2017 IPR023376 YqcC-like domain BV404_RS10605 b74eee7c0d181fb5981d5a7719b7a80b 103 Gene3D G3DSA:1.20.1440.40 5 102 2.8E-35 T 09-03-2017 IPR023376 YqcC-like domain BV404_RS10605 b74eee7c0d181fb5981d5a7719b7a80b 103 PIRSF PIRSF006257 1 103 5.1E-38 T 09-03-2017 IPR007384 Protein of unknown function UCP006257 BV404_RS06335 b41a82baf6c6d5a70d6b625b2c0cea54 535 Gene3D G3DSA:3.30.450.20 25 176 3.7E-36 T 09-03-2017 BV404_RS06335 b41a82baf6c6d5a70d6b625b2c0cea54 535 Pfam PF17200 Single Cache domain 2 42 183 3.4E-28 T 09-03-2017 IPR033480 Single Cache domain 2 BV404_RS06335 b41a82baf6c6d5a70d6b625b2c0cea54 535 Pfam PF00672 HAMP domain 187 254 4.6E-16 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 BV404_RS06335 b41a82baf6c6d5a70d6b625b2c0cea54 535 SMART SM00304 206 258 1.6E-10 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 BV404_RS06335 b41a82baf6c6d5a70d6b625b2c0cea54 535 SMART SM00304 259 311 15.0 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 BV404_RS06335 b41a82baf6c6d5a70d6b625b2c0cea54 535 Gene3D G3DSA:1.10.287.950 288 504 6.5E-56 T 09-03-2017 BV404_RS06335 b41a82baf6c6d5a70d6b625b2c0cea54 535 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 400 429 3.6E-21 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 BV404_RS06335 b41a82baf6c6d5a70d6b625b2c0cea54 535 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 181 201 3.6E-21 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 BV404_RS06335 b41a82baf6c6d5a70d6b625b2c0cea54 535 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 371 398 3.6E-21 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 BV404_RS06335 b41a82baf6c6d5a70d6b625b2c0cea54 535 SMART SM00283 273 534 1.0E-68 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 BV404_RS06335 b41a82baf6c6d5a70d6b625b2c0cea54 535 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 530 4.4E-44 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 BV404_RS06335 b41a82baf6c6d5a70d6b625b2c0cea54 535 SMART SM01049 36 125 5.4E-20 T 09-03-2017 IPR033480 Single Cache domain 2 BV404_RS06335 b41a82baf6c6d5a70d6b625b2c0cea54 535 SUPERFAMILY SSF58104 226 535 2.35E-71 T 09-03-2017 BV404_RS13685 adbeb25abad04eed723b5e4624a3847c 609 Gene3D G3DSA:3.40.50.300 361 596 2.1E-81 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS13685 adbeb25abad04eed723b5e4624a3847c 609 Gene3D G3DSA:1.20.1560.10 31 329 9.7E-34 T 09-03-2017 BV404_RS13685 adbeb25abad04eed723b5e4624a3847c 609 SUPERFAMILY SSF90123 22 325 4.45E-47 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 BV404_RS13685 adbeb25abad04eed723b5e4624a3847c 609 SUPERFAMILY SSF90123 507 522 4.45E-47 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 BV404_RS13685 adbeb25abad04eed723b5e4624a3847c 609 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS13685 adbeb25abad04eed723b5e4624a3847c 609 Pfam PF00664 ABC transporter transmembrane region 41 310 4.6E-19 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 BV404_RS13685 adbeb25abad04eed723b5e4624a3847c 609 SUPERFAMILY SSF52540 352 601 6.63E-89 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS13685 adbeb25abad04eed723b5e4624a3847c 609 SMART SM00382 386 577 3.6E-22 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS13685 adbeb25abad04eed723b5e4624a3847c 609 Pfam PF00005 ABC transporter 378 531 3.0E-35 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS07805 a7e7af9f2242e4db944d1beeac5ce704 352 Pfam PF00990 Diguanylate cyclase, GGDEF domain 179 333 6.9E-37 T 09-03-2017 IPR000160 GGDEF domain BV404_RS07805 a7e7af9f2242e4db944d1beeac5ce704 352 SMART SM00267 168 337 9.6E-48 T 09-03-2017 IPR000160 GGDEF domain BV404_RS07805 a7e7af9f2242e4db944d1beeac5ce704 352 Gene3D G3DSA:3.30.70.270 181 339 2.7E-45 T 09-03-2017 BV404_RS07805 a7e7af9f2242e4db944d1beeac5ce704 352 SUPERFAMILY SSF55073 184 336 8.63E-40 T 09-03-2017 IPR029787 Nucleotide cyclase BV404_RS07805 a7e7af9f2242e4db944d1beeac5ce704 352 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 177 336 2.6E-40 T 09-03-2017 IPR000160 GGDEF domain BV404_RS13280 abe8d09ed47b6ee5442a0e01083cc47c 649 Pfam PF00501 AMP-binding enzyme 83 522 7.4E-92 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 BV404_RS13280 abe8d09ed47b6ee5442a0e01083cc47c 649 Gene3D G3DSA:3.40.50.980 80 266 2.3E-44 T 09-03-2017 BV404_RS13280 abe8d09ed47b6ee5442a0e01083cc47c 649 SUPERFAMILY SSF56801 10 644 1.16E-184 T 09-03-2017 BV404_RS13280 abe8d09ed47b6ee5442a0e01083cc47c 649 Gene3D G3DSA:2.30.38.10 439 515 4.7E-9 T 09-03-2017 BV404_RS13280 abe8d09ed47b6ee5442a0e01083cc47c 649 Gene3D G3DSA:3.30.300.30 518 638 3.8E-28 T 09-03-2017 BV404_RS13280 abe8d09ed47b6ee5442a0e01083cc47c 649 Gene3D G3DSA:3.40.50.980 267 424 4.3E-26 T 09-03-2017 BV404_RS13280 abe8d09ed47b6ee5442a0e01083cc47c 649 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 643 0.0 T 09-03-2017 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: R-HSA-71384 BV404_RS13280 abe8d09ed47b6ee5442a0e01083cc47c 649 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 09-03-2017 IPR020845 AMP-binding, conserved site BV404_RS13280 abe8d09ed47b6ee5442a0e01083cc47c 649 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 645 52.717 T 09-03-2017 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: R-HSA-71384 BV404_RS13280 abe8d09ed47b6ee5442a0e01083cc47c 649 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 3.2E-20 T 09-03-2017 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 BV404_RS13280 abe8d09ed47b6ee5442a0e01083cc47c 649 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 609 3.5E-25 T 09-03-2017 IPR025110 AMP-binding enzyme C-terminal domain BV404_RS01630 a6197f84d1504a38d4a3c685f6618c45 319 Gene3D G3DSA:3.40.190.10 106 188 1.8E-24 T 09-03-2017 BV404_RS01630 a6197f84d1504a38d4a3c685f6618c45 319 Gene3D G3DSA:3.40.190.10 287 314 1.8E-24 T 09-03-2017 BV404_RS01630 a6197f84d1504a38d4a3c685f6618c45 319 SUPERFAMILY SSF53850 106 309 1.76E-38 T 09-03-2017 BV404_RS01630 a6197f84d1504a38d4a3c685f6618c45 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 61 1.4E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS01630 a6197f84d1504a38d4a3c685f6618c45 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 61 72 1.4E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS01630 a6197f84d1504a38d4a3c685f6618c45 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.4E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS01630 a6197f84d1504a38d4a3c685f6618c45 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 84 1.2E-18 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS01630 a6197f84d1504a38d4a3c685f6618c45 319 Pfam PF03466 LysR substrate binding domain 124 308 1.6E-22 T 09-03-2017 IPR005119 LysR, substrate-binding BV404_RS01630 a6197f84d1504a38d4a3c685f6618c45 319 SUPERFAMILY SSF46785 22 99 2.95E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS01630 a6197f84d1504a38d4a3c685f6618c45 319 Gene3D G3DSA:1.10.10.10 17 101 4.9E-34 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS01630 a6197f84d1504a38d4a3c685f6618c45 319 Gene3D G3DSA:3.40.190.10 189 281 2.3E-15 T 09-03-2017 BV404_RS13930 819d8a4ab82f2518d1f2c6e00f9bc0d6 276 SUPERFAMILY SSF53223 6 105 1.32E-30 T 09-03-2017 BV404_RS13930 819d8a4ab82f2518d1f2c6e00f9bc0d6 276 Gene3D G3DSA:3.40.192.10 3 110 2.4E-35 T 09-03-2017 BV404_RS13930 819d8a4ab82f2518d1f2c6e00f9bc0d6 276 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 120 195 1.2E-13 T 09-03-2017 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase BV404_RS13930 819d8a4ab82f2518d1f2c6e00f9bc0d6 276 Gene3D G3DSA:3.40.50.720 111 248 1.3E-44 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS13930 819d8a4ab82f2518d1f2c6e00f9bc0d6 276 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 7 274 1.2E-83 T 09-03-2017 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 BV404_RS13930 819d8a4ab82f2518d1f2c6e00f9bc0d6 276 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 10 92 5.9E-23 T 09-03-2017 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 BV404_RS13930 819d8a4ab82f2518d1f2c6e00f9bc0d6 276 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 5 273 31.102 T 09-03-2017 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 BV404_RS13930 819d8a4ab82f2518d1f2c6e00f9bc0d6 276 SUPERFAMILY SSF51735 106 273 7.43E-40 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS02555 dbdcaaff769d1b925dcde3b51eda4223 393 SUPERFAMILY SSF55021 283 380 2.68E-26 T 09-03-2017 BV404_RS02555 dbdcaaff769d1b925dcde3b51eda4223 393 Gene3D G3DSA:3.40.190.10 110 196 6.1E-32 T 09-03-2017 BV404_RS02555 dbdcaaff769d1b925dcde3b51eda4223 393 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 264 286 - T 09-03-2017 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 BV404_RS02555 dbdcaaff769d1b925dcde3b51eda4223 393 Gene3D G3DSA:1.20.59.10 4 109 8.3E-42 T 09-03-2017 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BV404_RS02555 dbdcaaff769d1b925dcde3b51eda4223 393 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 8 91 7.1E-28 T 09-03-2017 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 BV404_RS02555 dbdcaaff769d1b925dcde3b51eda4223 393 SUPERFAMILY SSF53850 108 294 1.3E-55 T 09-03-2017 BV404_RS02555 dbdcaaff769d1b925dcde3b51eda4223 393 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 328 335 - T 09-03-2017 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 BV404_RS02555 dbdcaaff769d1b925dcde3b51eda4223 393 Pfam PF01817 Chorismate mutase type II 12 91 1.6E-16 T 09-03-2017 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BV404_RS02555 dbdcaaff769d1b925dcde3b51eda4223 393 Gene3D G3DSA:3.40.190.10 197 276 5.0E-26 T 09-03-2017 BV404_RS02555 dbdcaaff769d1b925dcde3b51eda4223 393 SUPERFAMILY SSF48600 7 95 1.25E-18 T 09-03-2017 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BV404_RS02555 dbdcaaff769d1b925dcde3b51eda4223 393 SMART SM00830 12 93 4.9E-22 T 09-03-2017 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BV404_RS02555 dbdcaaff769d1b925dcde3b51eda4223 393 Pfam PF00800 Prephenate dehydratase 109 290 2.7E-59 T 09-03-2017 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 BV404_RS02555 dbdcaaff769d1b925dcde3b51eda4223 393 PIRSF PIRSF001500 1 383 6.2E-143 T 09-03-2017 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 BV404_RS02555 dbdcaaff769d1b925dcde3b51eda4223 393 Gene3D G3DSA:3.30.70.260 298 381 3.3E-28 T 09-03-2017 BV404_RS02690 08b4e05933688995209f665ac5ba24dc 446 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 446 5.9E-209 T 09-03-2017 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 BV404_RS02690 08b4e05933688995209f665ac5ba24dc 446 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 256 4.6E-115 T 09-03-2017 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 BV404_RS02690 08b4e05933688995209f665ac5ba24dc 446 Pfam PF11973 NQRA C-terminal domain 261 310 7.7E-21 T 09-03-2017 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 BV404_RS02690 08b4e05933688995209f665ac5ba24dc 446 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 446 46.581 T 09-03-2017 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 BV404_RS00450 de2120fcb1a1ac08648c44bad4833bc2 483 ProSitePatterns PS00163 Fumarate lyases signature. 330 339 - T 09-03-2017 IPR020557 Fumarate lyase, conserved site GO:0003824 BV404_RS00450 de2120fcb1a1ac08648c44bad4833bc2 483 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 1.7E-25 T 09-03-2017 IPR000362 Fumarate lyase family BV404_RS00450 de2120fcb1a1ac08648c44bad4833bc2 483 PRINTS PR00149 Fumarate lyase superfamily signature 330 346 1.7E-25 T 09-03-2017 IPR000362 Fumarate lyase family BV404_RS00450 de2120fcb1a1ac08648c44bad4833bc2 483 PRINTS PR00149 Fumarate lyase superfamily signature 193 211 1.7E-25 T 09-03-2017 IPR000362 Fumarate lyase family BV404_RS00450 de2120fcb1a1ac08648c44bad4833bc2 483 PRINTS PR00149 Fumarate lyase superfamily signature 284 311 1.7E-25 T 09-03-2017 IPR000362 Fumarate lyase family BV404_RS00450 de2120fcb1a1ac08648c44bad4833bc2 483 Pfam PF10415 Fumarase C C-terminus 421 474 1.1E-17 T 09-03-2017 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BV404_RS00450 de2120fcb1a1ac08648c44bad4833bc2 483 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 16 482 1.7E-254 T 09-03-2017 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 BV404_RS00450 de2120fcb1a1ac08648c44bad4833bc2 483 Pfam PF00206 Lyase 23 355 3.5E-105 T 09-03-2017 IPR022761 Fumarate lyase, N-terminal BV404_RS00450 de2120fcb1a1ac08648c44bad4833bc2 483 Gene3D G3DSA:1.10.275.10 15 152 6.9E-55 T 09-03-2017 IPR024083 Fumarase/histidase, N-terminal BV404_RS00450 de2120fcb1a1ac08648c44bad4833bc2 483 Gene3D G3DSA:1.20.200.10 153 413 1.2E-86 T 09-03-2017 BV404_RS00450 de2120fcb1a1ac08648c44bad4833bc2 483 Gene3D G3DSA:1.10.40.30 421 472 1.1E-19 T 09-03-2017 BV404_RS00450 de2120fcb1a1ac08648c44bad4833bc2 483 SUPERFAMILY SSF48557 14 468 1.44E-142 T 09-03-2017 IPR008948 L-Aspartase-like GO:0003824 BV404_RS04890 f934f3788f2603a3e3b5e4fef39dfb30 149 SUPERFAMILY SSF55729 13 148 6.69E-24 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS04890 f934f3788f2603a3e3b5e4fef39dfb30 149 Pfam PF00583 Acetyltransferase (GNAT) family 41 114 6.2E-9 T 09-03-2017 IPR000182 GNAT domain GO:0008080 BV404_RS04890 f934f3788f2603a3e3b5e4fef39dfb30 149 Gene3D G3DSA:3.40.630.30 19 126 1.7E-20 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS05720 c5a0b32d2e825708f74c72df09347070 72 SUPERFAMILY SSF50249 1 70 6.86E-29 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS05720 c5a0b32d2e825708f74c72df09347070 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 7.8E-39 T 09-03-2017 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 BV404_RS05720 c5a0b32d2e825708f74c72df09347070 72 Gene3D G3DSA:2.40.50.140 1 71 1.6E-39 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS05720 c5a0b32d2e825708f74c72df09347070 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.394 T 09-03-2017 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 BV404_RS05720 c5a0b32d2e825708f74c72df09347070 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 6.4E-28 T 09-03-2017 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 BV404_RS05720 c5a0b32d2e825708f74c72df09347070 72 SMART SM00316 4 72 5.4E-6 T 09-03-2017 IPR022967 RNA-binding domain, S1 BV404_RS12105 7973a6a502b4edcfe42fd46a618b1c14 60 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 29 49 - T 09-03-2017 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 BV404_RS06405 0f1a0efec0db254184a552293a060466 904 SUPERFAMILY SSF101904 532 875 3.27E-108 T 09-03-2017 BV404_RS06405 0f1a0efec0db254184a552293a060466 904 Gene3D G3DSA:2.120.10.90 530 864 3.4E-139 T 09-03-2017 BV404_RS06405 0f1a0efec0db254184a552293a060466 904 Gene3D G3DSA:1.10.268.10 362 496 3.3E-50 T 09-03-2017 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BV404_RS06405 0f1a0efec0db254184a552293a060466 904 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 865 24.753 T 09-03-2017 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BV404_RS06405 0f1a0efec0db254184a552293a060466 904 Gene3D G3DSA:3.90.199.10 34 216 2.9E-85 T 09-03-2017 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 BV404_RS06405 0f1a0efec0db254184a552293a060466 904 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 505 6.4E-158 T 09-03-2017 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BV404_RS06405 0f1a0efec0db254184a552293a060466 904 Gene3D G3DSA:3.30.1360.40 236 332 4.0E-40 T 09-03-2017 IPR024946 Arginine repressor C-terminal-like domain BV404_RS06405 0f1a0efec0db254184a552293a060466 904 SMART SM00434 11 498 1.4E-302 T 09-03-2017 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BV404_RS06405 0f1a0efec0db254184a552293a060466 904 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 735 761 1.7E-6 T 09-03-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BV404_RS06405 0f1a0efec0db254184a552293a060466 904 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 817 863 6.1E-11 T 09-03-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BV404_RS06405 0f1a0efec0db254184a552293a060466 904 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 767 813 4.6E-15 T 09-03-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BV404_RS06405 0f1a0efec0db254184a552293a060466 904 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 636 7.7E-11 T 09-03-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BV404_RS06405 0f1a0efec0db254184a552293a060466 904 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 644 687 1.2E-7 T 09-03-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BV404_RS06405 0f1a0efec0db254184a552293a060466 904 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 709 0.3 T 09-03-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BV404_RS06405 0f1a0efec0db254184a552293a060466 904 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 583 2.6E-8 T 09-03-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BV404_RS06405 0f1a0efec0db254184a552293a060466 904 SUPERFAMILY SSF56719 30 520 5.49E-188 T 09-03-2017 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 BV404_RS06405 0f1a0efec0db254184a552293a060466 904 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 709 0.0 T 09-03-2017 BV404_RS07335 348ee7a541fc464f2d014e5cc425a6cd 72 Pfam PF11197 Protein of unknown function (DUF2835) 4 70 2.8E-27 T 09-03-2017 IPR021363 Protein of unknown function DUF2835 BV404_RS04650 abae5db2a514ebf31d0638da233ebee4 275 Pfam PF00669 Bacterial flagellin N-terminal helical region 6 142 1.1E-37 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BV404_RS04650 abae5db2a514ebf31d0638da233ebee4 275 SUPERFAMILY SSF64518 1 275 4.71E-74 T 09-03-2017 BV404_RS04650 abae5db2a514ebf31d0638da233ebee4 275 PRINTS PR00207 Flagellin signature 76 95 3.4E-18 T 09-03-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BV404_RS04650 abae5db2a514ebf31d0638da233ebee4 275 PRINTS PR00207 Flagellin signature 37 54 3.4E-18 T 09-03-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BV404_RS04650 abae5db2a514ebf31d0638da233ebee4 275 PRINTS PR00207 Flagellin signature 111 134 3.4E-18 T 09-03-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BV404_RS04650 abae5db2a514ebf31d0638da233ebee4 275 Pfam PF00700 Bacterial flagellin C-terminal helical region 190 274 5.9E-27 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BV404_RS04650 abae5db2a514ebf31d0638da233ebee4 275 Gene3D G3DSA:1.20.1330.10 55 230 1.5E-45 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BV404_RS11715 2198a262a0a8db3d5520ddbcb22d6410 601 Pfam PF04348 LppC putative lipoprotein 40 599 1.2E-191 T 09-03-2017 IPR007443 Penicillin-binding protein activator LpoA BV404_RS11715 2198a262a0a8db3d5520ddbcb22d6410 601 Gene3D G3DSA:3.40.50.2300 531 594 2.3E-53 T 09-03-2017 BV404_RS11715 2198a262a0a8db3d5520ddbcb22d6410 601 Gene3D G3DSA:3.40.50.2300 256 366 2.3E-53 T 09-03-2017 BV404_RS11715 2198a262a0a8db3d5520ddbcb22d6410 601 SUPERFAMILY SSF53822 454 598 7.07E-69 T 09-03-2017 IPR028082 Periplasmic binding protein-like I BV404_RS11715 2198a262a0a8db3d5520ddbcb22d6410 601 SUPERFAMILY SSF53822 260 426 7.07E-69 T 09-03-2017 IPR028082 Periplasmic binding protein-like I BV404_RS11715 2198a262a0a8db3d5520ddbcb22d6410 601 Hamap MF_01890 Penicillin-binding protein activator LpoA [lpoA]. 1 601 29.121 T 09-03-2017 IPR007443 Penicillin-binding protein activator LpoA BV404_RS11715 2198a262a0a8db3d5520ddbcb22d6410 601 Gene3D G3DSA:3.40.50.2300 367 530 1.8E-49 T 09-03-2017 BV404_RS07055 c0b4d67dd0f3006eae89aacfd76877b8 951 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 66 83 - T 09-03-2017 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 BV404_RS07055 c0b4d67dd0f3006eae89aacfd76877b8 951 Pfam PF00384 Molybdopterin oxidoreductase 118 568 3.3E-52 T 09-03-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BV404_RS07055 c0b4d67dd0f3006eae89aacfd76877b8 951 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 19 45 1.3E-4 T 09-03-2017 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal BV404_RS07055 c0b4d67dd0f3006eae89aacfd76877b8 951 SMART SM00926 61 115 3.9E-16 T 09-03-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BV404_RS07055 c0b4d67dd0f3006eae89aacfd76877b8 951 Gene3D G3DSA:2.20.25.90 58 115 5.2E-18 T 09-03-2017 BV404_RS07055 c0b4d67dd0f3006eae89aacfd76877b8 951 SUPERFAMILY SSF50692 752 782 1.02E-38 T 09-03-2017 IPR009010 Aspartate decarboxylase-like domain BV404_RS07055 c0b4d67dd0f3006eae89aacfd76877b8 951 SUPERFAMILY SSF50692 813 951 1.02E-38 T 09-03-2017 IPR009010 Aspartate decarboxylase-like domain BV404_RS07055 c0b4d67dd0f3006eae89aacfd76877b8 951 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 62 112 1.8E-11 T 09-03-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BV404_RS07055 c0b4d67dd0f3006eae89aacfd76877b8 951 Gene3D G3DSA:2.40.40.20 641 674 9.3E-56 T 09-03-2017 BV404_RS07055 c0b4d67dd0f3006eae89aacfd76877b8 951 Gene3D G3DSA:2.40.40.20 812 951 9.3E-56 T 09-03-2017 BV404_RS07055 c0b4d67dd0f3006eae89aacfd76877b8 951 Gene3D G3DSA:2.40.40.20 768 779 9.3E-56 T 09-03-2017 BV404_RS07055 c0b4d67dd0f3006eae89aacfd76877b8 951 Pfam PF01568 Molydopterin dinucleotide binding domain 818 944 2.4E-20 T 09-03-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 BV404_RS07055 c0b4d67dd0f3006eae89aacfd76877b8 951 Gene3D G3DSA:3.40.50.740 371 394 5.4E-36 T 09-03-2017 BV404_RS07055 c0b4d67dd0f3006eae89aacfd76877b8 951 Gene3D G3DSA:3.40.50.740 446 616 5.4E-36 T 09-03-2017 BV404_RS07055 c0b4d67dd0f3006eae89aacfd76877b8 951 SUPERFAMILY SSF53706 59 646 2.49E-199 T 09-03-2017 BV404_RS07055 c0b4d67dd0f3006eae89aacfd76877b8 951 Gene3D G3DSA:3.40.228.10 191 370 9.1E-62 T 09-03-2017 BV404_RS08560 fc8f2229ea93710c2e1c2c0a1e992a17 201 Pfam PF13409 Glutathione S-transferase, N-terminal domain 9 73 2.1E-10 T 09-03-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 BV404_RS08560 fc8f2229ea93710c2e1c2c0a1e992a17 201 SUPERFAMILY SSF47616 77 190 4.19E-7 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like BV404_RS08560 fc8f2229ea93710c2e1c2c0a1e992a17 201 SUPERFAMILY SSF52833 2 87 1.42E-12 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS08560 fc8f2229ea93710c2e1c2c0a1e992a17 201 Gene3D G3DSA:3.40.30.10 4 91 1.6E-15 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS08560 fc8f2229ea93710c2e1c2c0a1e992a17 201 Gene3D G3DSA:1.20.1050.10 92 188 6.9E-23 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like BV404_RS10695 eb7aae9a55b0ff061cfe63d191e71972 376 SUPERFAMILY SSF50129 324 375 3.15E-12 T 09-03-2017 IPR011032 GroES-like BV404_RS10695 eb7aae9a55b0ff061cfe63d191e71972 376 SUPERFAMILY SSF50129 3 192 2.21E-72 T 09-03-2017 IPR011032 GroES-like BV404_RS10695 eb7aae9a55b0ff061cfe63d191e71972 376 Gene3D G3DSA:3.90.180.10 3 195 8.7E-68 T 09-03-2017 IPR011032 GroES-like BV404_RS10695 eb7aae9a55b0ff061cfe63d191e71972 376 SUPERFAMILY SSF51735 166 339 4.05E-49 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS10695 eb7aae9a55b0ff061cfe63d191e71972 376 Gene3D G3DSA:3.40.50.720 196 315 4.0E-45 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS10695 eb7aae9a55b0ff061cfe63d191e71972 376 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 34 160 2.0E-25 T 09-03-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BV404_RS10695 eb7aae9a55b0ff061cfe63d191e71972 376 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 67 81 - T 09-03-2017 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 BV404_RS10695 eb7aae9a55b0ff061cfe63d191e71972 376 Pfam PF00107 Zinc-binding dehydrogenase 203 322 7.7E-26 T 09-03-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BV404_RS10695 eb7aae9a55b0ff061cfe63d191e71972 376 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 8 375 1.8E-226 T 09-03-2017 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|Reactome: R-HSA-71384 BV404_RS10695 eb7aae9a55b0ff061cfe63d191e71972 376 SMART SM00829 16 373 0.0012 T 09-03-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BV404_RS06130 0e5cfa5cc40999590090cccd4bcffd6f 314 SUPERFAMILY SSF111369 35 89 3.92E-5 T 09-03-2017 BV404_RS06130 0e5cfa5cc40999590090cccd4bcffd6f 314 Pfam PF13437 HlyD family secretion protein 195 299 1.9E-7 T 09-03-2017 BV404_RS06130 0e5cfa5cc40999590090cccd4bcffd6f 314 SUPERFAMILY SSF111369 100 158 7.85E-6 T 09-03-2017 BV404_RS06130 0e5cfa5cc40999590090cccd4bcffd6f 314 Pfam PF13533 Biotin-lipoyl like 44 79 3.6E-5 T 09-03-2017 BV404_RS06130 0e5cfa5cc40999590090cccd4bcffd6f 314 Gene3D G3DSA:2.40.50.100 193 224 1.6E-7 T 09-03-2017 BV404_RS06130 0e5cfa5cc40999590090cccd4bcffd6f 314 Gene3D G3DSA:2.40.50.100 41 66 1.6E-7 T 09-03-2017 BV404_RS01865 c4b017d5f7320518673b6837b7214c40 209 Pfam PF00293 NUDIX domain 58 175 7.6E-11 T 09-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 BV404_RS01865 c4b017d5f7320518673b6837b7214c40 209 ProSitePatterns PS00893 Nudix box signature. 96 117 - T 09-03-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 BV404_RS01865 c4b017d5f7320518673b6837b7214c40 209 Gene3D G3DSA:3.90.79.10 14 200 4.6E-53 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 BV404_RS01865 c4b017d5f7320518673b6837b7214c40 209 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 15 198 6.3E-61 T 09-03-2017 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 BV404_RS01865 c4b017d5f7320518673b6837b7214c40 209 SUPERFAMILY SSF55811 11 206 4.47E-45 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 BV404_RS04565 996024558652065c65fc5bc4e81e4e0c 299 Gene3D G3DSA:1.20.1330.10 57 244 6.3E-19 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BV404_RS04565 996024558652065c65fc5bc4e81e4e0c 299 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 141 1.1E-13 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BV404_RS04565 996024558652065c65fc5bc4e81e4e0c 299 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 182 4.0E-53 T 09-03-2017 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 BV404_RS04565 996024558652065c65fc5bc4e81e4e0c 299 SUPERFAMILY SSF64518 1 297 2.09E-53 T 09-03-2017 BV404_RS14495 8438d04d10766f68f51f5c1821327448 504 Pfam PF00005 ABC transporter 274 427 1.8E-17 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS14495 8438d04d10766f68f51f5c1821327448 504 Pfam PF00005 ABC transporter 23 172 4.6E-33 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS14495 8438d04d10766f68f51f5c1821327448 504 Gene3D G3DSA:3.40.50.300 274 493 1.6E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS14495 8438d04d10766f68f51f5c1821327448 504 Gene3D G3DSA:3.40.50.300 4 225 1.5E-62 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS14495 8438d04d10766f68f51f5c1821327448 504 SMART SM00382 281 476 2.9E-5 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS14495 8438d04d10766f68f51f5c1821327448 504 SMART SM00382 32 228 1.6E-7 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS14495 8438d04d10766f68f51f5c1821327448 504 SUPERFAMILY SSF52540 273 490 8.3E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS14495 8438d04d10766f68f51f5c1821327448 504 SUPERFAMILY SSF52540 7 226 2.61E-58 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS14495 8438d04d10766f68f51f5c1821327448 504 ProSitePatterns PS00211 ABC transporters family signature. 400 414 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS10875 d09c1a6d30873fdaa9778fa8b5ac4031 72 SUPERFAMILY SSF161187 1 69 7.72E-28 T 09-03-2017 IPR029037 YfgJ-like BV404_RS10875 d09c1a6d30873fdaa9778fa8b5ac4031 72 Gene3D G3DSA:2.10.290.10 1 69 1.1E-29 T 09-03-2017 IPR029037 YfgJ-like BV404_RS10875 d09c1a6d30873fdaa9778fa8b5ac4031 72 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 5 67 4.0E-25 T 09-03-2017 IPR010807 Protein of unknown function DUF1407 BV404_RS10875 d09c1a6d30873fdaa9778fa8b5ac4031 72 Pfam PF07191 zinc-ribbons 4 67 1.3E-27 T 09-03-2017 IPR010807 Protein of unknown function DUF1407 BV404_RS06495 01773e3f9caf1602021104fbf94eb4b9 525 ProSitePatterns PS01303 BCCT family of transporters signature. 336 345 - T 09-03-2017 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 BV404_RS06495 01773e3f9caf1602021104fbf94eb4b9 525 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 73 520 1.1E-136 T 09-03-2017 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 BV404_RS06495 01773e3f9caf1602021104fbf94eb4b9 525 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 33 520 2.1E-173 T 09-03-2017 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 BV404_RS02950 463e1a4fbef257a4b5e03a82103057b2 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 3.8E-7 T 09-03-2017 IPR001451 Hexapeptide repeat BV404_RS02950 463e1a4fbef257a4b5e03a82103057b2 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 2 33 3.4E-6 T 09-03-2017 IPR001451 Hexapeptide repeat BV404_RS02950 463e1a4fbef257a4b5e03a82103057b2 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 35 69 3.2E-5 T 09-03-2017 IPR001451 Hexapeptide repeat BV404_RS02950 463e1a4fbef257a4b5e03a82103057b2 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 41.56 T 09-03-2017 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 BV404_RS02950 463e1a4fbef257a4b5e03a82103057b2 262 PIRSF PIRSF000456 4 262 1.1E-95 T 09-03-2017 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 BV404_RS02950 463e1a4fbef257a4b5e03a82103057b2 262 Gene3D G3DSA:2.160.10.10 2 93 8.3E-22 T 09-03-2017 BV404_RS02950 463e1a4fbef257a4b5e03a82103057b2 262 Gene3D G3DSA:1.20.1180.10 209 262 2.2E-24 T 09-03-2017 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 BV404_RS02950 463e1a4fbef257a4b5e03a82103057b2 262 Gene3D G3DSA:2.160.10.10 94 208 4.7E-24 T 09-03-2017 BV404_RS02950 463e1a4fbef257a4b5e03a82103057b2 262 SUPERFAMILY SSF51161 1 262 3.72E-75 T 09-03-2017 IPR011004 Trimeric LpxA-like BV404_RS02950 463e1a4fbef257a4b5e03a82103057b2 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 1.5E-92 T 09-03-2017 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 BV404_RS02950 463e1a4fbef257a4b5e03a82103057b2 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 1.4E-26 T 09-03-2017 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 BV404_RS14850 687d0f05dd8189283f8a39fff0a73a53 208 SUPERFAMILY SSF51306 82 204 1.53E-36 T 09-03-2017 IPR015927 Peptidase S24/S26A/S26B/S26C BV404_RS14850 687d0f05dd8189283f8a39fff0a73a53 208 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 128 139 2.5E-12 T 09-03-2017 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 BV404_RS14850 687d0f05dd8189283f8a39fff0a73a53 208 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 156 168 2.5E-12 T 09-03-2017 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 BV404_RS14850 687d0f05dd8189283f8a39fff0a73a53 208 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 117 127 2.5E-12 T 09-03-2017 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 BV404_RS14850 687d0f05dd8189283f8a39fff0a73a53 208 TIGRFAM TIGR00498 lexA: repressor LexA 1 205 5.9E-81 T 09-03-2017 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 BV404_RS14850 687d0f05dd8189283f8a39fff0a73a53 208 Pfam PF01726 LexA DNA binding domain 1 65 8.6E-30 T 09-03-2017 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 BV404_RS14850 687d0f05dd8189283f8a39fff0a73a53 208 Gene3D G3DSA:2.10.109.10 82 205 5.2E-45 T 09-03-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain BV404_RS14850 687d0f05dd8189283f8a39fff0a73a53 208 SUPERFAMILY SSF46785 3 69 1.33E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS14850 687d0f05dd8189283f8a39fff0a73a53 208 Hamap MF_00015 LexA repressor [lexA]. 3 205 32.13 T 09-03-2017 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 BV404_RS14850 687d0f05dd8189283f8a39fff0a73a53 208 Pfam PF00717 Peptidase S24-like 120 186 3.3E-15 T 09-03-2017 IPR019759 Peptidase S24/S26A/S26B BV404_RS14850 687d0f05dd8189283f8a39fff0a73a53 208 Gene3D G3DSA:1.10.10.10 1 69 2.3E-28 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS08985 2d242d586cd17f45dcd7fb5db5258603 582 SMART SM00382 368 555 2.6E-18 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS08985 2d242d586cd17f45dcd7fb5db5258603 582 SUPERFAMILY SSF90123 14 327 1.09E-73 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 BV404_RS08985 2d242d586cd17f45dcd7fb5db5258603 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 582 5.9E-244 T 09-03-2017 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 BV404_RS08985 2d242d586cd17f45dcd7fb5db5258603 582 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS08985 2d242d586cd17f45dcd7fb5db5258603 582 Pfam PF00664 ABC transporter transmembrane region 28 295 2.3E-56 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 BV404_RS08985 2d242d586cd17f45dcd7fb5db5258603 582 Gene3D G3DSA:3.40.50.300 342 574 2.0E-86 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS08985 2d242d586cd17f45dcd7fb5db5258603 582 SUPERFAMILY SSF52540 332 580 2.24E-95 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS08985 2d242d586cd17f45dcd7fb5db5258603 582 Pfam PF00005 ABC transporter 359 509 1.7E-35 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS08985 2d242d586cd17f45dcd7fb5db5258603 582 Gene3D G3DSA:1.20.1560.10 13 325 5.6E-74 T 09-03-2017 BV404_RS12610 713078ae32af8622592a4786632f9cbb 574 SUPERFAMILY SSF52540 171 559 2.95E-93 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS12610 713078ae32af8622592a4786632f9cbb 574 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 381 395 - T 09-03-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 BV404_RS12610 713078ae32af8622592a4786632f9cbb 574 Gene3D G3DSA:3.40.50.300 291 559 4.6E-89 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS12610 713078ae32af8622592a4786632f9cbb 574 Pfam PF00437 Type II/IV secretion system protein 191 453 2.7E-74 T 09-03-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 BV404_RS12610 713078ae32af8622592a4786632f9cbb 574 SMART SM00382 314 435 0.0032 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS12610 713078ae32af8622592a4786632f9cbb 574 Gene3D G3DSA:3.30.450.90 160 286 2.4E-46 T 09-03-2017 BV404_RS12610 713078ae32af8622592a4786632f9cbb 574 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 42 148 2.8E-22 T 09-03-2017 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 BV404_RS12610 713078ae32af8622592a4786632f9cbb 574 SUPERFAMILY SSF160246 2 145 2.35E-38 T 09-03-2017 BV404_RS08510 4e53a2f6a7ab3289e8e336d0344206f1 133 Gene3D G3DSA:3.10.129.10 5 131 2.0E-41 T 09-03-2017 IPR029069 HotDog domain BV404_RS08510 4e53a2f6a7ab3289e8e336d0344206f1 133 SUPERFAMILY SSF54637 9 131 8.51E-38 T 09-03-2017 IPR029069 HotDog domain BV404_RS08510 4e53a2f6a7ab3289e8e336d0344206f1 133 Pfam PF03061 Thioesterase superfamily 26 98 4.5E-20 T 09-03-2017 IPR006683 Thioesterase domain Reactome: R-HSA-75105 BV404_RS01775 c72542df6343336ef120748d900c8656 933 SMART SM00387 401 517 2.7E-38 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS01775 c72542df6343336ef120748d900c8656 933 SMART SM00073 827 925 3.5E-8 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 BV404_RS01775 c72542df6343336ef120748d900c8656 933 Pfam PF00672 HAMP domain 179 245 2.8E-10 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 BV404_RS01775 c72542df6343336ef120748d900c8656 933 Pfam PF00072 Response regulator receiver domain 668 777 7.4E-29 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS01775 c72542df6343336ef120748d900c8656 933 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 401 515 1.8E-28 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS01775 c72542df6343336ef120748d900c8656 933 SUPERFAMILY SSF47226 762 775 1.96E-20 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 BV404_RS01775 c72542df6343336ef120748d900c8656 933 SUPERFAMILY SSF47226 817 920 1.96E-20 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 BV404_RS01775 c72542df6343336ef120748d900c8656 933 SMART SM00304 197 249 5.3E-6 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 BV404_RS01775 c72542df6343336ef120748d900c8656 933 Gene3D G3DSA:3.40.50.2300 653 783 1.1E-39 T 09-03-2017 BV404_RS01775 c72542df6343336ef120748d900c8656 933 SUPERFAMILY SSF52172 532 645 1.31E-8 T 09-03-2017 IPR011006 CheY-like superfamily BV404_RS01775 c72542df6343336ef120748d900c8656 933 SUPERFAMILY SSF47384 274 355 1.51E-22 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS01775 c72542df6343336ef120748d900c8656 933 SUPERFAMILY SSF52172 665 784 8.97E-37 T 09-03-2017 IPR011006 CheY-like superfamily BV404_RS01775 c72542df6343336ef120748d900c8656 933 SMART SM00448 666 779 3.1E-36 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS01775 c72542df6343336ef120748d900c8656 933 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 31 174 2.0E-51 T 09-03-2017 IPR019247 Histidine kinase BarA, N-terminal BV404_RS01775 c72542df6343336ef120748d900c8656 933 Gene3D G3DSA:1.20.120.160 829 931 3.6E-18 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 BV404_RS01775 c72542df6343336ef120748d900c8656 933 Gene3D G3DSA:3.30.565.10 355 519 9.0E-45 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS01775 c72542df6343336ef120748d900c8656 933 SUPERFAMILY SSF158472 199 246 1.44E-6 T 09-03-2017 BV404_RS01775 c72542df6343336ef120748d900c8656 933 Pfam PF01627 Hpt domain 837 921 1.5E-12 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 BV404_RS01775 c72542df6343336ef120748d900c8656 933 Gene3D G3DSA:1.10.287.130 281 350 1.6E-19 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS01775 c72542df6343336ef120748d900c8656 933 PRINTS PR00344 Bacterial sensor protein C-terminal signature 501 514 1.1E-12 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS01775 c72542df6343336ef120748d900c8656 933 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 456 1.1E-12 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS01775 c72542df6343336ef120748d900c8656 933 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 495 1.1E-12 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS01775 c72542df6343336ef120748d900c8656 933 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 470 1.1E-12 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS01775 c72542df6343336ef120748d900c8656 933 Pfam PF00512 His Kinase A (phospho-acceptor) domain 290 354 1.5E-20 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS01775 c72542df6343336ef120748d900c8656 933 SUPERFAMILY SSF55874 343 517 2.49E-44 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS01775 c72542df6343336ef120748d900c8656 933 SMART SM00388 289 354 2.5E-24 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS01165 df438a29f47490f78a36845787cf9118 183 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 182 4.5E-88 T 09-03-2017 IPR006513 Conserved hypothetical protein CHP01626, YtfJ BV404_RS01165 df438a29f47490f78a36845787cf9118 183 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 23 181 2.9E-75 T 09-03-2017 IPR006513 Conserved hypothetical protein CHP01626, YtfJ BV404_RS01165 df438a29f47490f78a36845787cf9118 183 Gene3D G3DSA:3.40.30.10 50 176 5.9E-5 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS14170 b435c5eb4f0b3704e7b49ec8d4bbd0e6 540 Pfam PF02096 60Kd inner membrane protein 351 530 1.7E-63 T 09-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 BV404_RS14170 b435c5eb4f0b3704e7b49ec8d4bbd0e6 540 Pfam PF14849 YidC periplasmic domain 66 340 1.3E-85 T 09-03-2017 IPR028053 Membrane insertase YidC, N-terminal BV404_RS14170 b435c5eb4f0b3704e7b49ec8d4bbd0e6 540 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 532 25.904 T 09-03-2017 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 BV404_RS14170 b435c5eb4f0b3704e7b49ec8d4bbd0e6 540 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 349 2.1E-113 T 09-03-2017 IPR028053 Membrane insertase YidC, N-terminal BV404_RS14170 b435c5eb4f0b3704e7b49ec8d4bbd0e6 540 PRINTS PR01900 YidC translocation/secretion protein signature 465 480 9.1E-27 T 09-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 BV404_RS14170 b435c5eb4f0b3704e7b49ec8d4bbd0e6 540 PRINTS PR01900 YidC translocation/secretion protein signature 336 352 9.1E-27 T 09-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 BV404_RS14170 b435c5eb4f0b3704e7b49ec8d4bbd0e6 540 PRINTS PR01900 YidC translocation/secretion protein signature 485 509 9.1E-27 T 09-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 BV404_RS14170 b435c5eb4f0b3704e7b49ec8d4bbd0e6 540 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 350 529 2.7E-73 T 09-03-2017 IPR028055 Membrane insertase YidC/Oxa1, C-terminal BV404_RS14170 b435c5eb4f0b3704e7b49ec8d4bbd0e6 540 PRINTS PR00701 60kDa inner membrane protein signature 71 92 1.3E-101 T 09-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 BV404_RS14170 b435c5eb4f0b3704e7b49ec8d4bbd0e6 540 PRINTS PR00701 60kDa inner membrane protein signature 161 181 1.3E-101 T 09-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 BV404_RS14170 b435c5eb4f0b3704e7b49ec8d4bbd0e6 540 PRINTS PR00701 60kDa inner membrane protein signature 321 341 1.3E-101 T 09-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 BV404_RS14170 b435c5eb4f0b3704e7b49ec8d4bbd0e6 540 PRINTS PR00701 60kDa inner membrane protein signature 2 23 1.3E-101 T 09-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 BV404_RS14170 b435c5eb4f0b3704e7b49ec8d4bbd0e6 540 PRINTS PR00701 60kDa inner membrane protein signature 249 264 1.3E-101 T 09-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 BV404_RS14170 b435c5eb4f0b3704e7b49ec8d4bbd0e6 540 PRINTS PR00701 60kDa inner membrane protein signature 214 232 1.3E-101 T 09-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 BV404_RS14170 b435c5eb4f0b3704e7b49ec8d4bbd0e6 540 PRINTS PR00701 60kDa inner membrane protein signature 412 435 1.3E-101 T 09-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 BV404_RS14170 b435c5eb4f0b3704e7b49ec8d4bbd0e6 540 PRINTS PR00701 60kDa inner membrane protein signature 496 519 1.3E-101 T 09-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 BV404_RS14170 b435c5eb4f0b3704e7b49ec8d4bbd0e6 540 PRINTS PR00701 60kDa inner membrane protein signature 459 481 1.3E-101 T 09-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 BV404_RS00850 a2b6a5da1222176f28c0a2bce306221f 210 SMART SM00419 160 208 4.2E-17 T 09-03-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BV404_RS00850 a2b6a5da1222176f28c0a2bce306221f 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 8.6E-16 T 09-03-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BV404_RS00850 a2b6a5da1222176f28c0a2bce306221f 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 09-03-2017 IPR018488 Cyclic nucleotide-binding, conserved site BV404_RS00850 a2b6a5da1222176f28c0a2bce306221f 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 09-03-2017 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 BV404_RS00850 a2b6a5da1222176f28c0a2bce306221f 210 SUPERFAMILY SSF51206 8 137 1.44E-34 T 09-03-2017 IPR018490 Cyclic nucleotide-binding-like BV404_RS00850 a2b6a5da1222176f28c0a2bce306221f 210 Gene3D G3DSA:2.60.120.10 6 143 1.9E-43 T 09-03-2017 IPR014710 RmlC-like jelly roll fold BV404_RS00850 a2b6a5da1222176f28c0a2bce306221f 210 SUPERFAMILY SSF46785 139 207 3.88E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS00850 a2b6a5da1222176f28c0a2bce306221f 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 7.2E-23 T 09-03-2017 IPR000595 Cyclic nucleotide-binding domain BV404_RS00850 a2b6a5da1222176f28c0a2bce306221f 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 09-03-2017 IPR018488 Cyclic nucleotide-binding, conserved site BV404_RS00850 a2b6a5da1222176f28c0a2bce306221f 210 Gene3D G3DSA:1.10.10.10 144 207 1.1E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS00850 a2b6a5da1222176f28c0a2bce306221f 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 5.7E-11 T 09-03-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BV404_RS00850 a2b6a5da1222176f28c0a2bce306221f 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 5.7E-11 T 09-03-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BV404_RS00850 a2b6a5da1222176f28c0a2bce306221f 210 SMART SM00100 2 122 2.5E-26 T 09-03-2017 IPR000595 Cyclic nucleotide-binding domain BV404_RS08580 7539f99cdde46757d071e4de91eb43b7 549 SUPERFAMILY SSF58104 240 548 8.24E-75 T 09-03-2017 BV404_RS08580 7539f99cdde46757d071e4de91eb43b7 549 Gene3D G3DSA:1.10.287.950 301 518 5.4E-58 T 09-03-2017 BV404_RS08580 7539f99cdde46757d071e4de91eb43b7 549 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 347 546 1.7E-47 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 BV404_RS08580 7539f99cdde46757d071e4de91eb43b7 549 Pfam PF00672 HAMP domain 199 267 7.3E-8 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 BV404_RS08580 7539f99cdde46757d071e4de91eb43b7 549 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 188 4.3E-19 T 09-03-2017 IPR024478 4HB MCP domain BV404_RS08580 7539f99cdde46757d071e4de91eb43b7 549 SMART SM00283 286 547 1.0E-91 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 BV404_RS08580 7539f99cdde46757d071e4de91eb43b7 549 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 461 490 7.4E-24 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 BV404_RS08580 7539f99cdde46757d071e4de91eb43b7 549 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 384 411 7.4E-24 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 BV404_RS08580 7539f99cdde46757d071e4de91eb43b7 549 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 413 442 7.4E-24 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 BV404_RS08580 7539f99cdde46757d071e4de91eb43b7 549 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 6 31 7.4E-24 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 BV404_RS02335 050209765cbc5dcc2dd7b6e2b647fe9e 685 SMART SM00267 231 402 5.4E-63 T 09-03-2017 IPR000160 GGDEF domain BV404_RS02335 050209765cbc5dcc2dd7b6e2b647fe9e 685 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 238 401 9.0E-41 T 09-03-2017 IPR000160 GGDEF domain BV404_RS02335 050209765cbc5dcc2dd7b6e2b647fe9e 685 Gene3D G3DSA:3.30.70.270 243 410 1.4E-53 T 09-03-2017 BV404_RS02335 050209765cbc5dcc2dd7b6e2b647fe9e 685 Gene3D G3DSA:3.20.20.450 415 666 6.3E-93 T 09-03-2017 IPR001633 EAL domain BV404_RS02335 050209765cbc5dcc2dd7b6e2b647fe9e 685 Pfam PF00990 Diguanylate cyclase, GGDEF domain 242 398 1.2E-45 T 09-03-2017 IPR000160 GGDEF domain BV404_RS02335 050209765cbc5dcc2dd7b6e2b647fe9e 685 SUPERFAMILY SSF141868 418 669 1.23E-87 T 09-03-2017 IPR001633 EAL domain BV404_RS02335 050209765cbc5dcc2dd7b6e2b647fe9e 685 SUPERFAMILY SSF55073 247 404 1.49E-47 T 09-03-2017 IPR029787 Nucleotide cyclase BV404_RS02335 050209765cbc5dcc2dd7b6e2b647fe9e 685 SMART SM00052 412 660 5.1E-105 T 09-03-2017 IPR001633 EAL domain BV404_RS02335 050209765cbc5dcc2dd7b6e2b647fe9e 685 Pfam PF00563 EAL domain 420 655 1.1E-72 T 09-03-2017 IPR001633 EAL domain BV404_RS07150 6d1f63f854367e38fbd2531303c94e90 790 SUPERFAMILY SSF81665 727 764 5.62E-11 T 09-03-2017 BV404_RS07150 6d1f63f854367e38fbd2531303c94e90 790 SUPERFAMILY SSF81665 251 306 5.62E-11 T 09-03-2017 BV404_RS07150 6d1f63f854367e38fbd2531303c94e90 790 SUPERFAMILY SSF81665 404 495 5.62E-11 T 09-03-2017 BV404_RS07150 6d1f63f854367e38fbd2531303c94e90 790 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 228 784 7.3E-156 T 09-03-2017 BV404_RS07150 6d1f63f854367e38fbd2531303c94e90 790 SUPERFAMILY SSF56784 500 519 1.2E-48 T 09-03-2017 IPR023214 HAD-like domain BV404_RS07150 6d1f63f854367e38fbd2531303c94e90 790 SUPERFAMILY SSF56784 554 782 1.2E-48 T 09-03-2017 IPR023214 HAD-like domain BV404_RS07150 6d1f63f854367e38fbd2531303c94e90 790 Gene3D G3DSA:3.40.50.1000 603 751 2.5E-45 T 09-03-2017 IPR023214 HAD-like domain BV404_RS07150 6d1f63f854367e38fbd2531303c94e90 790 Gene3D G3DSA:3.40.50.1000 477 517 2.5E-45 T 09-03-2017 IPR023214 HAD-like domain BV404_RS07150 6d1f63f854367e38fbd2531303c94e90 790 Gene3D G3DSA:3.30.70.100 91 161 1.8E-17 T 09-03-2017 BV404_RS07150 6d1f63f854367e38fbd2531303c94e90 790 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 279 762 9.1E-78 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 BV404_RS07150 6d1f63f854367e38fbd2531303c94e90 790 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 503 509 - T 09-03-2017 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 BV404_RS07150 6d1f63f854367e38fbd2531303c94e90 790 Pfam PF00122 E1-E2 ATPase 278 492 4.1E-56 T 09-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 BV404_RS07150 6d1f63f854367e38fbd2531303c94e90 790 SUPERFAMILY SSF55008 86 162 2.75E-18 T 09-03-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 BV404_RS07150 6d1f63f854367e38fbd2531303c94e90 790 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 245 784 4.5E-163 T 09-03-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BV404_RS07150 6d1f63f854367e38fbd2531303c94e90 790 PRINTS PR00943 Copper-transporting ATPase signature 276 295 7.2E-6 T 09-03-2017 BV404_RS07150 6d1f63f854367e38fbd2531303c94e90 790 PRINTS PR00943 Copper-transporting ATPase signature 296 314 7.2E-6 T 09-03-2017 BV404_RS07150 6d1f63f854367e38fbd2531303c94e90 790 PRINTS PR00943 Copper-transporting ATPase signature 660 677 7.2E-6 T 09-03-2017 BV404_RS07150 6d1f63f854367e38fbd2531303c94e90 790 PRINTS PR00943 Copper-transporting ATPase signature 135 155 7.2E-6 T 09-03-2017 BV404_RS07150 6d1f63f854367e38fbd2531303c94e90 790 Gene3D G3DSA:3.40.1110.10 520 594 0.001 T 09-03-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 BV404_RS07150 6d1f63f854367e38fbd2531303c94e90 790 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 4 86 7.4E-28 T 09-03-2017 IPR021993 Putative metal-binding domain of cation transport ATPase BV404_RS07150 6d1f63f854367e38fbd2531303c94e90 790 SUPERFAMILY SSF81653 318 402 2.62E-23 T 09-03-2017 BV404_RS07150 6d1f63f854367e38fbd2531303c94e90 790 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 273 786 2.9E-124 T 09-03-2017 BV404_RS07150 6d1f63f854367e38fbd2531303c94e90 790 Pfam PF00702 haloacid dehalogenase-like hydrolase 498 695 1.2E-33 T 09-03-2017 BV404_RS07150 6d1f63f854367e38fbd2531303c94e90 790 ProSitePatterns PS01229 Hypothetical cof family signature 2. 682 704 - T 09-03-2017 BV404_RS07150 6d1f63f854367e38fbd2531303c94e90 790 Pfam PF00403 Heavy-metal-associated domain 93 154 3.1E-11 T 09-03-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 BV404_RS07150 6d1f63f854367e38fbd2531303c94e90 790 Gene3D G3DSA:2.70.150.10 251 402 4.0E-25 T 09-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 BV404_RS07150 6d1f63f854367e38fbd2531303c94e90 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 682 701 2.5E-27 T 09-03-2017 BV404_RS07150 6d1f63f854367e38fbd2531303c94e90 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 501 515 2.5E-27 T 09-03-2017 BV404_RS07150 6d1f63f854367e38fbd2531303c94e90 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 353 367 2.5E-27 T 09-03-2017 BV404_RS07150 6d1f63f854367e38fbd2531303c94e90 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 630 640 2.5E-27 T 09-03-2017 BV404_RS07150 6d1f63f854367e38fbd2531303c94e90 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 705 717 2.5E-27 T 09-03-2017 BV404_RS01020 07f666fc8525603df8073a47f18b908e 167 Pfam PF00333 Ribosomal protein S5, N-terminal domain 12 75 5.9E-29 T 09-03-2017 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 BV404_RS01020 07f666fc8525603df8073a47f18b908e 167 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 2.0E-69 T 09-03-2017 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 BV404_RS01020 07f666fc8525603df8073a47f18b908e 167 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 164 34.61 T 09-03-2017 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 BV404_RS01020 07f666fc8525603df8073a47f18b908e 167 SUPERFAMILY SSF54211 80 159 5.82E-27 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold BV404_RS01020 07f666fc8525603df8073a47f18b908e 167 Pfam PF03719 Ribosomal protein S5, C-terminal domain 88 158 3.4E-30 T 09-03-2017 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 BV404_RS01020 07f666fc8525603df8073a47f18b908e 167 Gene3D G3DSA:3.30.230.10 78 159 1.8E-33 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BV404_RS01020 07f666fc8525603df8073a47f18b908e 167 SUPERFAMILY SSF54768 8 76 5.86E-24 T 09-03-2017 BV404_RS01020 07f666fc8525603df8073a47f18b908e 167 ProSitePatterns PS00585 Ribosomal protein S5 signature. 29 61 - T 09-03-2017 IPR018192 Ribosomal protein S5, N-terminal, conserved site BV404_RS01020 07f666fc8525603df8073a47f18b908e 167 Gene3D G3DSA:3.30.160.20 10 73 1.6E-30 T 09-03-2017 IPR014720 Double-stranded RNA-binding domain BV404_RS13240 0b7d4c450f2eb97bd9633898acff01b6 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 2.0E-220 T 09-03-2017 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 BV404_RS13240 0b7d4c450f2eb97bd9633898acff01b6 419 SUPERFAMILY SSF50249 48 125 4.4E-29 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS13240 0b7d4c450f2eb97bd9633898acff01b6 419 Gene3D G3DSA:1.10.720.10 1 47 1.3E-21 T 09-03-2017 BV404_RS13240 0b7d4c450f2eb97bd9633898acff01b6 419 SUPERFAMILY SSF68912 1 46 8.24E-12 T 09-03-2017 IPR011112 Rho termination factor, N-terminal GO:0006353 BV404_RS13240 0b7d4c450f2eb97bd9633898acff01b6 419 SMART SM00382 170 355 8.9E-9 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS13240 0b7d4c450f2eb97bd9633898acff01b6 419 SMART SM00357 52 118 1.2E-17 T 09-03-2017 IPR011129 Cold shock protein GO:0003676 BV404_RS13240 0b7d4c450f2eb97bd9633898acff01b6 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 3.7E-23 T 09-03-2017 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 BV404_RS13240 0b7d4c450f2eb97bd9633898acff01b6 419 SMART SM00959 5 47 2.0E-17 T 09-03-2017 IPR011112 Rho termination factor, N-terminal GO:0006353 BV404_RS13240 0b7d4c450f2eb97bd9633898acff01b6 419 Gene3D G3DSA:2.40.50.140 49 117 2.8E-36 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS13240 0b7d4c450f2eb97bd9633898acff01b6 419 SUPERFAMILY SSF52540 90 371 1.95E-68 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS13240 0b7d4c450f2eb97bd9633898acff01b6 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 1.4E-16 T 09-03-2017 IPR011112 Rho termination factor, N-terminal GO:0006353 BV404_RS13240 0b7d4c450f2eb97bd9633898acff01b6 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 3.2E-32 T 09-03-2017 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 BV404_RS13240 0b7d4c450f2eb97bd9633898acff01b6 419 Gene3D G3DSA:3.40.50.300 132 418 2.7E-107 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS13240 0b7d4c450f2eb97bd9633898acff01b6 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 252.912 T 09-03-2017 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 BV404_RS01345 767b37f695f114df728b6d5014c920e5 155 Gene3D G3DSA:3.30.70.140 2 98 3.4E-37 T 09-03-2017 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal BV404_RS01345 767b37f695f114df728b6d5014c920e5 155 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 97 4.3E-31 T 09-03-2017 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal BV404_RS01345 767b37f695f114df728b6d5014c920e5 155 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 150 9.4E-19 T 09-03-2017 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal BV404_RS01345 767b37f695f114df728b6d5014c920e5 155 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 150 3.2E-62 T 09-03-2017 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 BV404_RS01345 767b37f695f114df728b6d5014c920e5 155 SUPERFAMILY SSF57825 101 151 8.11E-16 T 09-03-2017 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal BV404_RS01345 767b37f695f114df728b6d5014c920e5 155 Gene3D G3DSA:2.30.30.20 101 152 3.2E-23 T 09-03-2017 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal BV404_RS01345 767b37f695f114df728b6d5014c920e5 155 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 3.0E-44 T 09-03-2017 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal BV404_RS01345 767b37f695f114df728b6d5014c920e5 155 SUPERFAMILY SSF54893 2 100 3.27E-36 T 09-03-2017 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal BV404_RS01345 767b37f695f114df728b6d5014c920e5 155 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 33.745 T 09-03-2017 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 BV404_RS08545 d49075a21c25bdab7dc094fcff892487 917 SUPERFAMILY SSF63411 287 451 4.19E-6 T 09-03-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BV404_RS08545 d49075a21c25bdab7dc094fcff892487 917 SUPERFAMILY SSF63411 496 712 8.21E-24 T 09-03-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BV404_RS08545 d49075a21c25bdab7dc094fcff892487 917 Gene3D G3DSA:3.30.830.10 496 719 1.5E-19 T 09-03-2017 IPR011237 Peptidase M16 domain GO:0046872 BV404_RS08545 d49075a21c25bdab7dc094fcff892487 917 Gene3D G3DSA:3.30.830.10 23 248 1.4E-46 T 09-03-2017 IPR011237 Peptidase M16 domain GO:0046872 BV404_RS08545 d49075a21c25bdab7dc094fcff892487 917 Pfam PF00675 Insulinase (Peptidase family M16) 49 168 2.4E-25 T 09-03-2017 IPR011765 Peptidase M16, N-terminal BV404_RS08545 d49075a21c25bdab7dc094fcff892487 917 Pfam PF05193 Peptidase M16 inactive domain 668 839 6.8E-13 T 09-03-2017 IPR007863 Peptidase M16, C-terminal BV404_RS08545 d49075a21c25bdab7dc094fcff892487 917 Pfam PF05193 Peptidase M16 inactive domain 197 370 7.2E-17 T 09-03-2017 IPR007863 Peptidase M16, C-terminal BV404_RS08545 d49075a21c25bdab7dc094fcff892487 917 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 62 85 - T 09-03-2017 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 BV404_RS08545 d49075a21c25bdab7dc094fcff892487 917 SUPERFAMILY SSF63411 21 246 8.8E-43 T 09-03-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BV404_RS08545 d49075a21c25bdab7dc094fcff892487 917 SUPERFAMILY SSF63411 743 902 6.29E-14 T 09-03-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BV404_RS08545 d49075a21c25bdab7dc094fcff892487 917 Gene3D G3DSA:3.30.830.10 762 901 1.6E-9 T 09-03-2017 IPR011237 Peptidase M16 domain GO:0046872 BV404_RS12520 89514c0c7d71f3330772074168535580 141 Gene3D G3DSA:3.30.70.970 9 127 6.9E-50 T 09-03-2017 IPR009671 Regulator of ribonuclease activity B domain BV404_RS12520 89514c0c7d71f3330772074168535580 141 Pfam PF06877 Regulator of ribonuclease activity B 19 120 8.2E-35 T 09-03-2017 IPR009671 Regulator of ribonuclease activity B domain BV404_RS12520 89514c0c7d71f3330772074168535580 141 PIRSF PIRSF018193 8 141 1.8E-58 T 09-03-2017 IPR016716 Regulator of ribonuclease activity B BV404_RS12520 89514c0c7d71f3330772074168535580 141 SUPERFAMILY SSF89946 8 126 7.85E-40 T 09-03-2017 IPR009671 Regulator of ribonuclease activity B domain BV404_RS12520 89514c0c7d71f3330772074168535580 141 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 11 124 30.015 T 09-03-2017 IPR016716 Regulator of ribonuclease activity B BV404_RS00455 aa1987315965be5a91e4df6b35867310 636 SUPERFAMILY SSF103190 213 304 2.59E-14 T 09-03-2017 IPR029151 Periplasmic sensor domain-like BV404_RS00455 aa1987315965be5a91e4df6b35867310 636 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 466 621 1.4E-40 T 09-03-2017 IPR000160 GGDEF domain BV404_RS00455 aa1987315965be5a91e4df6b35867310 636 SUPERFAMILY SSF55073 475 621 1.02E-38 T 09-03-2017 IPR029787 Nucleotide cyclase BV404_RS00455 aa1987315965be5a91e4df6b35867310 636 Pfam PF00990 Diguanylate cyclase, GGDEF domain 471 618 3.2E-35 T 09-03-2017 IPR000160 GGDEF domain BV404_RS00455 aa1987315965be5a91e4df6b35867310 636 Gene3D G3DSA:3.30.450.20 212 308 4.9E-18 T 09-03-2017 BV404_RS00455 aa1987315965be5a91e4df6b35867310 636 Gene3D G3DSA:3.30.450.20 76 208 4.1E-32 T 09-03-2017 BV404_RS00455 aa1987315965be5a91e4df6b35867310 636 SUPERFAMILY SSF55785 358 458 4.38E-9 T 09-03-2017 IPR000014 PAS domain BV404_RS00455 aa1987315965be5a91e4df6b35867310 636 Gene3D G3DSA:3.30.70.270 471 621 1.4E-43 T 09-03-2017 BV404_RS00455 aa1987315965be5a91e4df6b35867310 636 SMART SM00267 458 623 8.8E-44 T 09-03-2017 IPR000160 GGDEF domain BV404_RS00455 aa1987315965be5a91e4df6b35867310 636 Gene3D G3DSA:3.30.450.20 358 457 3.8E-9 T 09-03-2017 BV404_RS00455 aa1987315965be5a91e4df6b35867310 636 SUPERFAMILY SSF103190 37 208 2.35E-39 T 09-03-2017 IPR029151 Periplasmic sensor domain-like BV404_RS00455 aa1987315965be5a91e4df6b35867310 636 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 347 461 3.2E-8 T 09-03-2017 IPR000014 PAS domain BV404_RS02280 3747bb33c0ebadde285efd375440ba0a 711 SUPERFAMILY SSF54791 553 630 7.06E-17 T 09-03-2017 IPR004088 K Homology domain, type 1 GO:0003723 BV404_RS02280 3747bb33c0ebadde285efd375440ba0a 711 Gene3D G3DSA:2.40.50.140 619 694 5.0E-27 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS02280 3747bb33c0ebadde285efd375440ba0a 711 Gene3D G3DSA:3.30.1370.10 553 618 7.0E-26 T 09-03-2017 IPR004088 K Homology domain, type 1 GO:0003723 BV404_RS02280 3747bb33c0ebadde285efd375440ba0a 711 SUPERFAMILY SSF55666 451 549 1.54E-27 T 09-03-2017 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BV404_RS02280 3747bb33c0ebadde285efd375440ba0a 711 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 4 694 30.32 T 09-03-2017 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 BV404_RS02280 3747bb33c0ebadde285efd375440ba0a 711 SMART SM00322 553 618 5.7E-12 T 09-03-2017 IPR004087 K Homology domain GO:0003676 BV404_RS02280 3747bb33c0ebadde285efd375440ba0a 711 Pfam PF00575 S1 RNA binding domain 620 691 3.5E-19 T 09-03-2017 IPR003029 S1 domain GO:0003676 BV404_RS02280 3747bb33c0ebadde285efd375440ba0a 711 Pfam PF00013 KH domain 558 615 1.1E-9 T 09-03-2017 IPR004088 K Homology domain, type 1 GO:0003723 BV404_RS02280 3747bb33c0ebadde285efd375440ba0a 711 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 242 321 2.3E-25 T 09-03-2017 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 BV404_RS02280 3747bb33c0ebadde285efd375440ba0a 711 PIRSF PIRSF005499 2 711 1.3E-300 T 09-03-2017 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 BV404_RS02280 3747bb33c0ebadde285efd375440ba0a 711 SUPERFAMILY SSF54211 293 489 2.53E-47 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold BV404_RS02280 3747bb33c0ebadde285efd375440ba0a 711 Pfam PF03725 3' exoribonuclease family, domain 2 148 211 4.7E-13 T 09-03-2017 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BV404_RS02280 3747bb33c0ebadde285efd375440ba0a 711 Pfam PF03725 3' exoribonuclease family, domain 2 461 528 7.2E-5 T 09-03-2017 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BV404_RS02280 3747bb33c0ebadde285efd375440ba0a 711 Gene3D G3DSA:3.30.230.70 315 543 4.2E-89 T 09-03-2017 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BV404_RS02280 3747bb33c0ebadde285efd375440ba0a 711 Gene3D G3DSA:3.30.230.70 3 226 5.0E-81 T 09-03-2017 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BV404_RS02280 3747bb33c0ebadde285efd375440ba0a 711 SMART SM00316 621 691 6.7E-26 T 09-03-2017 IPR022967 RNA-binding domain, S1 BV404_RS02280 3747bb33c0ebadde285efd375440ba0a 711 Gene3D G3DSA:1.10.10.400 227 314 8.7E-27 T 09-03-2017 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 BV404_RS02280 3747bb33c0ebadde285efd375440ba0a 711 SUPERFAMILY SSF55666 146 236 4.49E-28 T 09-03-2017 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BV404_RS02280 3747bb33c0ebadde285efd375440ba0a 711 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 11 692 0.0 T 09-03-2017 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 BV404_RS02280 3747bb33c0ebadde285efd375440ba0a 711 SUPERFAMILY SSF50249 607 695 9.94E-22 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS02280 3747bb33c0ebadde285efd375440ba0a 711 Pfam PF01138 3' exoribonuclease family, domain 1 17 145 1.3E-18 T 09-03-2017 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BV404_RS02280 3747bb33c0ebadde285efd375440ba0a 711 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 1.7E-20 T 09-03-2017 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BV404_RS02280 3747bb33c0ebadde285efd375440ba0a 711 SUPERFAMILY SSF54211 5 145 1.92E-48 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold BV404_RS01170 e8f7ffeeebb0205cdac938dba058f378 211 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 43 197 8.2E-68 T 09-03-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 BV404_RS01170 e8f7ffeeebb0205cdac938dba058f378 211 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 42 203 37.418 T 09-03-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 BV404_RS01170 e8f7ffeeebb0205cdac938dba058f378 211 SUPERFAMILY SSF55068 3 206 6.67E-80 T 09-03-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 BV404_RS01170 e8f7ffeeebb0205cdac938dba058f378 211 Gene3D G3DSA:3.30.1060.10 4 197 2.7E-80 T 09-03-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 BV404_RS01170 e8f7ffeeebb0205cdac938dba058f378 211 Pfam PF01625 Peptide methionine sulfoxide reductase 45 197 2.3E-66 T 09-03-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 BV404_RS05210 c16ab91b493cf0ddd37d44c2602bf7fa 317 SUPERFAMILY SSF161098 98 294 6.54E-16 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS05210 c16ab91b493cf0ddd37d44c2602bf7fa 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 309 4.5E-36 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS05210 c16ab91b493cf0ddd37d44c2602bf7fa 317 Gene3D G3DSA:1.10.3720.10 97 306 3.6E-16 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS00785 e63247ec935ad31dd81cbae22d23e432 361 Gene3D G3DSA:1.20.1090.10 172 355 8.3E-70 T 09-03-2017 BV404_RS00785 e63247ec935ad31dd81cbae22d23e432 361 Gene3D G3DSA:3.40.50.1970 2 171 5.2E-68 T 09-03-2017 BV404_RS00785 e63247ec935ad31dd81cbae22d23e432 361 Pfam PF01761 3-dehydroquinate synthase 67 324 5.5E-114 T 09-03-2017 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 BV404_RS00785 e63247ec935ad31dd81cbae22d23e432 361 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 353 2.6E-123 T 09-03-2017 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 BV404_RS00785 e63247ec935ad31dd81cbae22d23e432 361 SUPERFAMILY SSF56796 4 355 3.27E-119 T 09-03-2017 BV404_RS00785 e63247ec935ad31dd81cbae22d23e432 361 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 357 43.716 T 09-03-2017 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 BV404_RS00785 e63247ec935ad31dd81cbae22d23e432 361 PIRSF PIRSF001455 7 358 1.2E-110 T 09-03-2017 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 BV404_RS05095 bfa96aaa3ee722b674f05b2aa194cdda 539 Gene3D G3DSA:3.40.50.980 29 198 1.5E-28 T 09-03-2017 BV404_RS05095 bfa96aaa3ee722b674f05b2aa194cdda 539 Pfam PF00501 AMP-binding enzyme 39 443 1.6E-78 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 BV404_RS05095 bfa96aaa3ee722b674f05b2aa194cdda 539 ProSitePatterns PS00455 Putative AMP-binding domain signature. 195 206 - T 09-03-2017 IPR020845 AMP-binding, conserved site BV404_RS05095 bfa96aaa3ee722b674f05b2aa194cdda 539 Gene3D G3DSA:3.30.300.30 438 538 2.0E-28 T 09-03-2017 BV404_RS05095 bfa96aaa3ee722b674f05b2aa194cdda 539 Gene3D G3DSA:3.40.50.980 199 362 4.5E-35 T 09-03-2017 BV404_RS05095 bfa96aaa3ee722b674f05b2aa194cdda 539 Gene3D G3DSA:2.30.38.10 363 436 1.9E-21 T 09-03-2017 BV404_RS05095 bfa96aaa3ee722b674f05b2aa194cdda 539 TIGRFAM TIGR02275 DHB_AMP_lig: (2,3-dihydroxybenzoyl)adenylate synthase 8 535 2.0E-254 T 09-03-2017 IPR011963 2,3-dihydroxybenzoate-AMP ligase GO:0008668|GO:0019290 BV404_RS05095 bfa96aaa3ee722b674f05b2aa194cdda 539 SUPERFAMILY SSF56801 8 538 2.35E-135 T 09-03-2017 BV404_RS05095 bfa96aaa3ee722b674f05b2aa194cdda 539 Pfam PF13193 AMP-binding enzyme C-terminal domain 452 528 1.6E-13 T 09-03-2017 IPR025110 AMP-binding enzyme C-terminal domain BV404_RS05255 abf1cc15722c842d86baf4a707621603 423 SUPERFAMILY SSF55874 294 411 3.87E-11 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS05255 abf1cc15722c842d86baf4a707621603 423 SUPERFAMILY SSF47384 207 291 1.75E-13 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS05255 abf1cc15722c842d86baf4a707621603 423 Gene3D G3DSA:3.30.565.10 295 364 5.1E-6 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS05255 abf1cc15722c842d86baf4a707621603 423 Gene3D G3DSA:1.10.287.130 217 289 2.4E-12 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS05255 abf1cc15722c842d86baf4a707621603 423 SMART SM00388 224 293 4.1E-12 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS05255 abf1cc15722c842d86baf4a707621603 423 Pfam PF00512 His Kinase A (phospho-acceptor) domain 226 289 1.8E-13 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS11625 762ebbcc3f82dc2dea429e6486091d10 903 Pfam PF02810 SEC-C motif 883 901 2.8E-10 T 09-03-2017 IPR004027 SEC-C motif BV404_RS11625 762ebbcc3f82dc2dea429e6486091d10 903 SMART SM00958 228 359 3.0E-81 T 09-03-2017 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 BV404_RS11625 762ebbcc3f82dc2dea429e6486091d10 903 Gene3D G3DSA:1.10.3060.10 648 831 6.8E-59 T 09-03-2017 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 BV404_RS11625 762ebbcc3f82dc2dea429e6486091d10 903 SUPERFAMILY SSF52540 369 416 5.51E-86 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11625 762ebbcc3f82dc2dea429e6486091d10 903 SUPERFAMILY SSF52540 5 228 5.51E-86 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11625 762ebbcc3f82dc2dea429e6486091d10 903 Gene3D G3DSA:3.40.50.300 418 619 1.4E-89 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11625 762ebbcc3f82dc2dea429e6486091d10 903 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 20.07 T 09-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BV404_RS11625 762ebbcc3f82dc2dea429e6486091d10 903 Gene3D G3DSA:3.40.50.300 370 417 2.3E-126 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11625 762ebbcc3f82dc2dea429e6486091d10 903 Gene3D G3DSA:3.40.50.300 2 228 2.3E-126 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11625 762ebbcc3f82dc2dea429e6486091d10 903 SUPERFAMILY SSF52540 418 610 2.05E-55 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11625 762ebbcc3f82dc2dea429e6486091d10 903 SUPERFAMILY SSF81767 227 369 3.27E-43 T 09-03-2017 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 BV404_RS11625 762ebbcc3f82dc2dea429e6486091d10 903 SUPERFAMILY SSF81886 620 840 4.19E-84 T 09-03-2017 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 BV404_RS11625 762ebbcc3f82dc2dea429e6486091d10 903 SUPERFAMILY SSF81886 879 891 4.19E-84 T 09-03-2017 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 BV404_RS11625 762ebbcc3f82dc2dea429e6486091d10 903 PRINTS PR00906 SecA protein signature 101 115 2.5E-72 T 09-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BV404_RS11625 762ebbcc3f82dc2dea429e6486091d10 903 PRINTS PR00906 SecA protein signature 414 427 2.5E-72 T 09-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BV404_RS11625 762ebbcc3f82dc2dea429e6486091d10 903 PRINTS PR00906 SecA protein signature 340 362 2.5E-72 T 09-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BV404_RS11625 762ebbcc3f82dc2dea429e6486091d10 903 PRINTS PR00906 SecA protein signature 63 87 2.5E-72 T 09-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BV404_RS11625 762ebbcc3f82dc2dea429e6486091d10 903 PRINTS PR00906 SecA protein signature 170 190 2.5E-72 T 09-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BV404_RS11625 762ebbcc3f82dc2dea429e6486091d10 903 PRINTS PR00906 SecA protein signature 117 127 2.5E-72 T 09-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BV404_RS11625 762ebbcc3f82dc2dea429e6486091d10 903 PRINTS PR00906 SecA protein signature 377 394 2.5E-72 T 09-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BV404_RS11625 762ebbcc3f82dc2dea429e6486091d10 903 Gene3D G3DSA:3.90.1440.10 230 369 1.3E-46 T 09-03-2017 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 BV404_RS11625 762ebbcc3f82dc2dea429e6486091d10 903 Pfam PF01043 SecA preprotein cross-linking domain 232 359 9.9E-39 T 09-03-2017 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 BV404_RS11625 762ebbcc3f82dc2dea429e6486091d10 903 Pfam PF07517 SecA DEAD-like domain 7 403 1.6E-133 T 09-03-2017 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 BV404_RS11625 762ebbcc3f82dc2dea429e6486091d10 903 SMART SM00957 6 403 0.0 T 09-03-2017 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 BV404_RS11625 762ebbcc3f82dc2dea429e6486091d10 903 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 817 0.0 T 09-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BV404_RS11625 762ebbcc3f82dc2dea429e6486091d10 903 ProSitePatterns PS01312 SecA family signature. 501 516 - T 09-03-2017 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 BV404_RS11625 762ebbcc3f82dc2dea429e6486091d10 903 Pfam PF07516 SecA Wing and Scaffold domain 617 829 3.5E-67 T 09-03-2017 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 BV404_RS13990 e3d958d822ddce0d2566b5b2cceb794c 458 SUPERFAMILY SSF51735 1 151 1.38E-36 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS13990 e3d958d822ddce0d2566b5b2cceb794c 458 Pfam PF02080 TrkA-C domain 156 225 4.1E-11 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BV404_RS13990 e3d958d822ddce0d2566b5b2cceb794c 458 Pfam PF02080 TrkA-C domain 391 449 6.1E-9 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BV404_RS13990 e3d958d822ddce0d2566b5b2cceb794c 458 Pfam PF02254 TrkA-N domain 235 350 2.9E-25 T 09-03-2017 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 BV404_RS13990 e3d958d822ddce0d2566b5b2cceb794c 458 Pfam PF02254 TrkA-N domain 3 115 4.0E-30 T 09-03-2017 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 BV404_RS13990 e3d958d822ddce0d2566b5b2cceb794c 458 SUPERFAMILY SSF51735 232 376 2.42E-33 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS13990 e3d958d822ddce0d2566b5b2cceb794c 458 Gene3D G3DSA:3.30.70.1450 391 436 6.9E-4 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BV404_RS13990 e3d958d822ddce0d2566b5b2cceb794c 458 SUPERFAMILY SSF116726 148 226 1.57E-9 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BV404_RS13990 e3d958d822ddce0d2566b5b2cceb794c 458 Gene3D G3DSA:3.40.50.720 233 376 2.6E-38 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS13990 e3d958d822ddce0d2566b5b2cceb794c 458 Gene3D G3DSA:3.40.50.720 1 152 1.2E-49 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS13990 e3d958d822ddce0d2566b5b2cceb794c 458 SUPERFAMILY SSF116726 366 437 5.23E-7 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BV404_RS13990 e3d958d822ddce0d2566b5b2cceb794c 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 1.7E-34 T 09-03-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 BV404_RS13990 e3d958d822ddce0d2566b5b2cceb794c 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 1.7E-34 T 09-03-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 BV404_RS13990 e3d958d822ddce0d2566b5b2cceb794c 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 1.7E-34 T 09-03-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 BV404_RS13990 e3d958d822ddce0d2566b5b2cceb794c 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 1.7E-34 T 09-03-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 BV404_RS13990 e3d958d822ddce0d2566b5b2cceb794c 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 1.7E-34 T 09-03-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 BV404_RS14645 1857fa9826bb05e2d8a78f122abf7272 312 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 7 298 6.9E-114 T 09-03-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BV404_RS14645 1857fa9826bb05e2d8a78f122abf7272 312 PIRSF PIRSF001438 1 312 2.1E-121 T 09-03-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BV404_RS14645 1857fa9826bb05e2d8a78f122abf7272 312 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 7 214 3.7E-79 T 09-03-2017 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BV404_RS14645 1857fa9826bb05e2d8a78f122abf7272 312 Gene3D G3DSA:3.40.190.10 4 111 1.5E-49 T 09-03-2017 BV404_RS14645 1857fa9826bb05e2d8a78f122abf7272 312 SUPERFAMILY SSF53850 6 220 4.82E-86 T 09-03-2017 BV404_RS14645 1857fa9826bb05e2d8a78f122abf7272 312 SUPERFAMILY SSF54782 222 310 2.35E-27 T 09-03-2017 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BV404_RS14645 1857fa9826bb05e2d8a78f122abf7272 312 Gene3D G3DSA:3.40.190.10 112 200 3.9E-40 T 09-03-2017 BV404_RS14645 1857fa9826bb05e2d8a78f122abf7272 312 PRINTS PR00151 Porphobilinogen deaminase signature 46 66 1.2E-47 T 09-03-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BV404_RS14645 1857fa9826bb05e2d8a78f122abf7272 312 PRINTS PR00151 Porphobilinogen deaminase signature 77 96 1.2E-47 T 09-03-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BV404_RS14645 1857fa9826bb05e2d8a78f122abf7272 312 PRINTS PR00151 Porphobilinogen deaminase signature 125 142 1.2E-47 T 09-03-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BV404_RS14645 1857fa9826bb05e2d8a78f122abf7272 312 PRINTS PR00151 Porphobilinogen deaminase signature 144 161 1.2E-47 T 09-03-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BV404_RS14645 1857fa9826bb05e2d8a78f122abf7272 312 PRINTS PR00151 Porphobilinogen deaminase signature 231 248 1.2E-47 T 09-03-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BV404_RS14645 1857fa9826bb05e2d8a78f122abf7272 312 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 6 298 39.805 T 09-03-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BV404_RS14645 1857fa9826bb05e2d8a78f122abf7272 312 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 228 296 5.5E-20 T 09-03-2017 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BV404_RS14645 1857fa9826bb05e2d8a78f122abf7272 312 Gene3D G3DSA:3.30.160.40 222 306 2.5E-27 T 09-03-2017 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BV404_RS14645 1857fa9826bb05e2d8a78f122abf7272 312 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 232 248 - T 09-03-2017 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BV404_RS05245 71f92d0c8637e3b6aa25658a30fbf9dc 715 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 59 715 9.3E-118 T 09-03-2017 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 BV404_RS05245 71f92d0c8637e3b6aa25658a30fbf9dc 715 SUPERFAMILY SSF56935 28 715 4.19E-136 T 09-03-2017 BV404_RS05245 71f92d0c8637e3b6aa25658a30fbf9dc 715 Gene3D G3DSA:2.40.170.20 175 715 5.3E-150 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 BV404_RS05245 71f92d0c8637e3b6aa25658a30fbf9dc 715 Gene3D G3DSA:2.170.130.10 28 171 1.9E-31 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 BV404_RS05245 71f92d0c8637e3b6aa25658a30fbf9dc 715 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 160 1.3E-15 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 BV404_RS05245 71f92d0c8637e3b6aa25658a30fbf9dc 715 Pfam PF00593 TonB dependent receptor 471 714 1.9E-30 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 BV404_RS02955 adeefd7d094ed56bec9ec877c68e8e6f 379 SUPERFAMILY SSF53756 6 377 2.55E-29 T 09-03-2017 BV404_RS02955 adeefd7d094ed56bec9ec877c68e8e6f 379 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 3 376 2.8E-142 T 09-03-2017 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 BV404_RS02955 adeefd7d094ed56bec9ec877c68e8e6f 379 Gene3D G3DSA:3.40.50.2000 162 347 1.8E-5 T 09-03-2017 BV404_RS02955 adeefd7d094ed56bec9ec877c68e8e6f 379 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 4 378 42.746 T 09-03-2017 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 BV404_RS02955 adeefd7d094ed56bec9ec877c68e8e6f 379 Pfam PF02684 Lipid-A-disaccharide synthetase 7 372 5.0E-132 T 09-03-2017 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 BV404_RS13425 73ed7434f7158822ac091262dc75ef06 245 SUPERFAMILY SSF51735 2 243 5.04E-38 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS13425 73ed7434f7158822ac091262dc75ef06 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.5E-11 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS13425 73ed7434f7158822ac091262dc75ef06 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.5E-11 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS13425 73ed7434f7158822ac091262dc75ef06 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 1.5E-11 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS13425 73ed7434f7158822ac091262dc75ef06 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.5E-11 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS13425 73ed7434f7158822ac091262dc75ef06 245 Pfam PF00106 short chain dehydrogenase 2 193 1.9E-32 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS13425 73ed7434f7158822ac091262dc75ef06 245 Gene3D G3DSA:3.40.50.720 2 215 2.4E-35 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS12160 4b0bfb061d3dbaab83a16ae5a4c6011a 610 Gene3D G3DSA:3.40.50.10490 447 610 3.1E-65 T 09-03-2017 BV404_RS12160 4b0bfb061d3dbaab83a16ae5a4c6011a 610 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 610 1.0E-261 T 09-03-2017 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 BV404_RS12160 4b0bfb061d3dbaab83a16ae5a4c6011a 610 Gene3D G3DSA:3.40.50.10490 245 446 5.0E-66 T 09-03-2017 BV404_RS12160 4b0bfb061d3dbaab83a16ae5a4c6011a 610 SUPERFAMILY SSF56235 2 234 1.29E-75 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal BV404_RS12160 4b0bfb061d3dbaab83a16ae5a4c6011a 610 SUPERFAMILY SSF53697 245 610 6.12E-112 T 09-03-2017 BV404_RS12160 4b0bfb061d3dbaab83a16ae5a4c6011a 610 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 610 40.775 T 09-03-2017 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 BV404_RS12160 4b0bfb061d3dbaab83a16ae5a4c6011a 610 Pfam PF01380 SIS domain 463 592 2.4E-23 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 BV404_RS12160 4b0bfb061d3dbaab83a16ae5a4c6011a 610 Pfam PF01380 SIS domain 290 418 7.1E-32 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 BV404_RS12160 4b0bfb061d3dbaab83a16ae5a4c6011a 610 Pfam PF13522 Glutamine amidotransferase domain 61 174 5.4E-23 T 09-03-2017 BV404_RS12160 4b0bfb061d3dbaab83a16ae5a4c6011a 610 Gene3D G3DSA:3.60.20.10 2 237 1.2E-79 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal BV404_RS09670 8a83a50d31a52b056441fb2f7a619a4a 151 SUPERFAMILY SSF54690 4 149 9.55E-55 T 09-03-2017 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BV404_RS09670 8a83a50d31a52b056441fb2f7a619a4a 151 Gene3D G3DSA:3.90.1170.40 3 149 2.4E-58 T 09-03-2017 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BV404_RS09670 8a83a50d31a52b056441fb2f7a619a4a 151 Pfam PF02391 MoaE protein 9 120 3.2E-38 T 09-03-2017 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BV404_RS05755 3ffb25a6f78409004a95270bccc0ed79 565 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 392 554 5.3E-28 T 09-03-2017 IPR000160 GGDEF domain BV404_RS05755 3ffb25a6f78409004a95270bccc0ed79 565 SUPERFAMILY SSF55073 401 557 6.59E-29 T 09-03-2017 IPR029787 Nucleotide cyclase BV404_RS05755 3ffb25a6f78409004a95270bccc0ed79 565 SMART SM00267 385 557 1.4E-26 T 09-03-2017 IPR000160 GGDEF domain BV404_RS05755 3ffb25a6f78409004a95270bccc0ed79 565 Gene3D G3DSA:3.30.70.270 398 558 2.9E-36 T 09-03-2017 BV404_RS05755 3ffb25a6f78409004a95270bccc0ed79 565 Pfam PF00990 Diguanylate cyclase, GGDEF domain 397 551 2.7E-30 T 09-03-2017 IPR000160 GGDEF domain BV404_RS11395 b3f960fe410c586dcf326a68c39b519d 406 PIRSF PIRSF001491 1 406 7.7E-162 T 09-03-2017 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 BV404_RS11395 b3f960fe410c586dcf326a68c39b519d 406 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 403 4.0E-180 T 09-03-2017 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 BV404_RS11395 b3f960fe410c586dcf326a68c39b519d 406 SUPERFAMILY SSF143856 118 234 7.06E-47 T 09-03-2017 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 BV404_RS11395 b3f960fe410c586dcf326a68c39b519d 406 SUPERFAMILY SSF53649 1 115 6.67E-72 T 09-03-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 BV404_RS11395 b3f960fe410c586dcf326a68c39b519d 406 SUPERFAMILY SSF53649 236 406 6.67E-72 T 09-03-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 BV404_RS11395 b3f960fe410c586dcf326a68c39b519d 406 Hamap MF_00740 Phosphopentomutase [deoB]. 1 406 54.35 T 09-03-2017 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 BV404_RS11395 b3f960fe410c586dcf326a68c39b519d 406 Gene3D G3DSA:3.40.720.10 239 406 5.6E-74 T 09-03-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 BV404_RS11395 b3f960fe410c586dcf326a68c39b519d 406 Gene3D G3DSA:3.40.720.10 1 114 5.6E-74 T 09-03-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 BV404_RS11395 b3f960fe410c586dcf326a68c39b519d 406 Gene3D G3DSA:3.30.70.1250 115 234 1.3E-49 T 09-03-2017 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 BV404_RS11395 b3f960fe410c586dcf326a68c39b519d 406 Pfam PF01676 Metalloenzyme superfamily 2 397 7.3E-44 T 09-03-2017 IPR006124 Metalloenzyme GO:0003824|GO:0046872 BV404_RS00395 1eee40a4afb8de2d2892acda5e7354a7 581 SUPERFAMILY SSF116726 413 484 5.1E-10 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BV404_RS00395 1eee40a4afb8de2d2892acda5e7354a7 581 Pfam PF02080 TrkA-C domain 418 484 6.1E-12 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BV404_RS00395 1eee40a4afb8de2d2892acda5e7354a7 581 Pfam PF03471 Transporter associated domain 497 570 1.7E-6 T 09-03-2017 IPR005170 Transporter-associated domain BV404_RS00395 1eee40a4afb8de2d2892acda5e7354a7 581 Gene3D G3DSA:3.30.465.10 501 569 9.5E-9 T 09-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 BV404_RS00395 1eee40a4afb8de2d2892acda5e7354a7 581 Gene3D G3DSA:3.30.70.1450 422 485 4.1E-7 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BV404_RS00395 1eee40a4afb8de2d2892acda5e7354a7 581 Hamap MF_01075 K(+)/H(+) antiporter NhaP2 [nhaP2]. 1 575 50.9 T 09-03-2017 IPR023729 K(+)/H(+) antiporter NhaP2 GO:0005451|GO:0006812|GO:0006813|GO:0006884|GO:0016021 BV404_RS00395 1eee40a4afb8de2d2892acda5e7354a7 581 SUPERFAMILY SSF56176 500 570 1.2E-8 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 BV404_RS00395 1eee40a4afb8de2d2892acda5e7354a7 581 Pfam PF00999 Sodium/hydrogen exchanger family 15 386 5.6E-56 T 09-03-2017 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 BV404_RS00395 1eee40a4afb8de2d2892acda5e7354a7 581 SMART SM01091 493 572 6.4E-10 T 09-03-2017 IPR005170 Transporter-associated domain BV404_RS03035 afe76245705570998a863ce15572f27d 191 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 8.1E-83 T 09-03-2017 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 BV404_RS03035 afe76245705570998a863ce15572f27d 191 Gene3D G3DSA:3.40.50.10490 1 190 8.6E-64 T 09-03-2017 BV404_RS03035 afe76245705570998a863ce15572f27d 191 SUPERFAMILY SSF53697 1 189 4.45E-52 T 09-03-2017 BV404_RS03035 afe76245705570998a863ce15572f27d 191 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 38.089 T 09-03-2017 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 BV404_RS03035 afe76245705570998a863ce15572f27d 191 Pfam PF13580 SIS domain 25 146 7.5E-31 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 BV404_RS14880 bb980c0585d482840229227e8cc794e7 369 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 11 368 2.0E-187 T 09-03-2017 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 BV404_RS14880 bb980c0585d482840229227e8cc794e7 369 Gene3D G3DSA:3.40.50.150 155 367 5.6E-45 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS14880 bb980c0585d482840229227e8cc794e7 369 SUPERFAMILY SSF53335 10 367 1.01E-55 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS14880 bb980c0585d482840229227e8cc794e7 369 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 11 368 2.5E-186 T 09-03-2017 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 BV404_RS14880 bb980c0585d482840229227e8cc794e7 369 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 301 330 - T 09-03-2017 IPR030390 RNA methyltransferase TrmA, active site BV404_RS14880 bb980c0585d482840229227e8cc794e7 369 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 350 360 - T 09-03-2017 IPR030391 RNA methyltransferase TrmA, conserved site BV404_RS14880 bb980c0585d482840229227e8cc794e7 369 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 368 44.483 T 09-03-2017 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 BV404_RS00045 bb980c0585d482840229227e8cc794e7 369 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 11 368 2.0E-187 T 09-03-2017 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 BV404_RS00045 bb980c0585d482840229227e8cc794e7 369 Gene3D G3DSA:3.40.50.150 155 367 5.6E-45 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS00045 bb980c0585d482840229227e8cc794e7 369 SUPERFAMILY SSF53335 10 367 1.01E-55 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS00045 bb980c0585d482840229227e8cc794e7 369 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 11 368 2.5E-186 T 09-03-2017 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 BV404_RS00045 bb980c0585d482840229227e8cc794e7 369 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 301 330 - T 09-03-2017 IPR030390 RNA methyltransferase TrmA, active site BV404_RS00045 bb980c0585d482840229227e8cc794e7 369 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 350 360 - T 09-03-2017 IPR030391 RNA methyltransferase TrmA, conserved site BV404_RS00045 bb980c0585d482840229227e8cc794e7 369 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 368 44.483 T 09-03-2017 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 BV404_RS02340 995e1faf3a0d6244174cae95ea583097 529 SUPERFAMILY SSF54980 393 468 2.81E-17 T 09-03-2017 IPR009022 Elongation factor G, III-V domain BV404_RS02340 995e1faf3a0d6244174cae95ea583097 529 SUPERFAMILY SSF52540 10 277 3.42E-85 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS02340 995e1faf3a0d6244174cae95ea583097 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 3.3E-10 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BV404_RS02340 995e1faf3a0d6244174cae95ea583097 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 3.3E-10 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BV404_RS02340 995e1faf3a0d6244174cae95ea583097 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 3.3E-10 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BV404_RS02340 995e1faf3a0d6244174cae95ea583097 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 3.3E-10 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BV404_RS02340 995e1faf3a0d6244174cae95ea583097 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 159 2.2E-19 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 BV404_RS02340 995e1faf3a0d6244174cae95ea583097 529 Gene3D G3DSA:2.40.30.10 293 394 7.7E-25 T 09-03-2017 BV404_RS02340 995e1faf3a0d6244174cae95ea583097 529 Gene3D G3DSA:3.40.50.300 10 283 2.9E-64 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS02340 995e1faf3a0d6244174cae95ea583097 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 09-03-2017 IPR031157 Tr-type G domain, conserved site BV404_RS02340 995e1faf3a0d6244174cae95ea583097 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 2.3E-46 T 09-03-2017 IPR032090 Peptide chain release factor 3, C-terminal BV404_RS02340 995e1faf3a0d6244174cae95ea583097 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 52.055 T 09-03-2017 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 BV404_RS02340 995e1faf3a0d6244174cae95ea583097 529 Gene3D G3DSA:3.30.70.870 395 463 5.2E-14 T 09-03-2017 BV404_RS02340 995e1faf3a0d6244174cae95ea583097 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 5.6E-9 T 09-03-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 BV404_RS02340 995e1faf3a0d6244174cae95ea583097 529 SUPERFAMILY SSF50447 262 393 7.54E-28 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain BV404_RS02340 995e1faf3a0d6244174cae95ea583097 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 6 529 1.4E-302 T 09-03-2017 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 BV404_RS02340 995e1faf3a0d6244174cae95ea583097 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 7.0E-46 T 09-03-2017 BV404_RS04225 047d6124cfb017f5d903dc5a3474b287 193 Hamap MF_00528 Septum formation protein Maf [maf]. 5 192 29.647 T 09-03-2017 IPR003697 Maf-like protein GO:0005737 BV404_RS04225 047d6124cfb017f5d903dc5a3474b287 193 Pfam PF02545 Maf-like protein 5 187 1.0E-45 T 09-03-2017 IPR003697 Maf-like protein GO:0005737 BV404_RS04225 047d6124cfb017f5d903dc5a3474b287 193 Gene3D G3DSA:3.90.950.10 3 188 4.0E-55 T 09-03-2017 IPR029001 Inosine triphosphate pyrophosphatase-like BV404_RS04225 047d6124cfb017f5d903dc5a3474b287 193 SUPERFAMILY SSF52972 1 186 3.2E-58 T 09-03-2017 IPR029001 Inosine triphosphate pyrophosphatase-like BV404_RS04225 047d6124cfb017f5d903dc5a3474b287 193 TIGRFAM TIGR00172 maf: septum formation protein Maf 4 185 4.3E-53 T 09-03-2017 IPR003697 Maf-like protein GO:0005737 BV404_RS04225 047d6124cfb017f5d903dc5a3474b287 193 PIRSF PIRSF006305 1 192 7.4E-46 T 09-03-2017 IPR003697 Maf-like protein GO:0005737 BV404_RS03810 02efc0e320786b8b8ae10d27d7e3f073 388 SUPERFAMILY SSF56059 1 238 4.09E-79 T 09-03-2017 BV404_RS03810 02efc0e320786b8b8ae10d27d7e3f073 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 09-03-2017 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BV404_RS03810 02efc0e320786b8b8ae10d27d7e3f073 388 Pfam PF08442 ATP-grasp domain 2 203 2.5E-79 T 09-03-2017 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BV404_RS03810 02efc0e320786b8b8ae10d27d7e3f073 388 SUPERFAMILY SSF52210 240 385 9.94E-54 T 09-03-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BV404_RS03810 02efc0e320786b8b8ae10d27d7e3f073 388 Gene3D G3DSA:3.30.470.20 96 239 2.2E-57 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 BV404_RS03810 02efc0e320786b8b8ae10d27d7e3f073 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 3.8E-173 T 09-03-2017 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BV404_RS03810 02efc0e320786b8b8ae10d27d7e3f073 388 Gene3D G3DSA:3.40.50.261 241 383 3.3E-66 T 09-03-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BV404_RS03810 02efc0e320786b8b8ae10d27d7e3f073 388 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 42.599 T 09-03-2017 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BV404_RS03810 02efc0e320786b8b8ae10d27d7e3f073 388 Pfam PF00549 CoA-ligase 262 382 3.4E-25 T 09-03-2017 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BV404_RS03810 02efc0e320786b8b8ae10d27d7e3f073 388 PIRSF PIRSF001554 1 388 4.0E-154 T 09-03-2017 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BV404_RS03810 02efc0e320786b8b8ae10d27d7e3f073 388 Gene3D G3DSA:3.30.1490.20 22 95 1.9E-31 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 BV404_RS05700 445a312135a7cdc14c4ac16ad1da7287 742 PIRSF PIRSF009407 1 742 0.0 T 09-03-2017 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 BV404_RS05700 445a312135a7cdc14c4ac16ad1da7287 742 SUPERFAMILY SSF53659 5 740 0.0 T 09-03-2017 BV404_RS05700 445a312135a7cdc14c4ac16ad1da7287 742 Pfam PF03971 Monomeric isocitrate dehydrogenase 7 740 0.0 T 09-03-2017 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 BV404_RS05700 445a312135a7cdc14c4ac16ad1da7287 742 Gene3D G3DSA:3.40.718.10 540 646 8.0E-36 T 09-03-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 BV404_RS05700 445a312135a7cdc14c4ac16ad1da7287 742 Gene3D G3DSA:3.40.718.10 190 289 8.0E-36 T 09-03-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 BV404_RS05700 445a312135a7cdc14c4ac16ad1da7287 742 Gene3D G3DSA:3.40.718.10 341 364 8.0E-36 T 09-03-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 BV404_RS05700 445a312135a7cdc14c4ac16ad1da7287 742 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 740 0.0 T 09-03-2017 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 BV404_RS01610 771cf4d40048474396c5518032633304 516 SUPERFAMILY SSF110921 393 498 2.09E-20 T 09-03-2017 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BV404_RS01610 771cf4d40048474396c5518032633304 516 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 09-03-2017 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BV404_RS01610 771cf4d40048474396c5518032633304 516 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 09-03-2017 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BV404_RS01610 771cf4d40048474396c5518032633304 516 SMART SM00917 369 499 3.6E-28 T 09-03-2017 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BV404_RS01610 771cf4d40048474396c5518032633304 516 Gene3D G3DSA:3.20.20.70 1 347 4.0E-145 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS01610 771cf4d40048474396c5518032633304 516 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 508 42.371 T 09-03-2017 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BV404_RS01610 771cf4d40048474396c5518032633304 516 SUPERFAMILY SSF51569 1 291 1.72E-99 T 09-03-2017 BV404_RS01610 771cf4d40048474396c5518032633304 516 Pfam PF00682 HMGL-like 4 273 2.3E-100 T 09-03-2017 IPR000891 Pyruvate carboxyltransferase GO:0003824 BV404_RS01610 771cf4d40048474396c5518032633304 516 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 496 7.6E-238 T 09-03-2017 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BV404_RS01610 771cf4d40048474396c5518032633304 516 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 498 1.4E-30 T 09-03-2017 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BV404_RS14345 913f4c8be3e8d50faa20124e6370d77e 460 ProSitePatterns PS00080 Multicopper oxidases signature 2. 442 453 - T 09-03-2017 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 BV404_RS14345 913f4c8be3e8d50faa20124e6370d77e 460 Pfam PF07731 Multicopper oxidase 359 456 1.2E-25 T 09-03-2017 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 BV404_RS14345 913f4c8be3e8d50faa20124e6370d77e 460 Gene3D G3DSA:2.60.40.420 26 154 7.2E-35 T 09-03-2017 IPR008972 Cupredoxin BV404_RS14345 913f4c8be3e8d50faa20124e6370d77e 460 Gene3D G3DSA:2.60.40.420 342 459 3.0E-35 T 09-03-2017 IPR008972 Cupredoxin BV404_RS14345 913f4c8be3e8d50faa20124e6370d77e 460 Pfam PF00394 Multicopper oxidase 165 281 2.1E-8 T 09-03-2017 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 BV404_RS14345 913f4c8be3e8d50faa20124e6370d77e 460 Gene3D G3DSA:2.60.40.420 155 283 2.7E-21 T 09-03-2017 IPR008972 Cupredoxin BV404_RS14345 913f4c8be3e8d50faa20124e6370d77e 460 SUPERFAMILY SSF49503 34 155 3.83E-38 T 09-03-2017 IPR008972 Cupredoxin BV404_RS14345 913f4c8be3e8d50faa20124e6370d77e 460 Pfam PF07732 Multicopper oxidase 44 156 8.4E-39 T 09-03-2017 IPR011707 Multicopper oxidase, type 3 GO:0005507 BV404_RS14345 913f4c8be3e8d50faa20124e6370d77e 460 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 2 26 4.5E-6 T 09-03-2017 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal BV404_RS14345 913f4c8be3e8d50faa20124e6370d77e 460 SUPERFAMILY SSF49503 159 280 4.76E-20 T 09-03-2017 IPR008972 Cupredoxin BV404_RS14345 913f4c8be3e8d50faa20124e6370d77e 460 SUPERFAMILY SSF49503 310 459 7.12E-34 T 09-03-2017 IPR008972 Cupredoxin BV404_RS03345 f2d96413ae7d3373da1a2b6124453a13 314 Gene3D G3DSA:3.40.50.2020 2 159 2.6E-73 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like BV404_RS03345 f2d96413ae7d3373da1a2b6124453a13 314 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 2.2E-125 T 09-03-2017 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 BV404_RS03345 f2d96413ae7d3373da1a2b6124453a13 314 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 1.4E-50 T 09-03-2017 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 BV404_RS03345 f2d96413ae7d3373da1a2b6124453a13 314 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 4 314 49.651 T 09-03-2017 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 BV404_RS03345 f2d96413ae7d3373da1a2b6124453a13 314 Gene3D G3DSA:3.40.50.2020 160 286 5.4E-53 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like BV404_RS03345 f2d96413ae7d3373da1a2b6124453a13 314 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 09-03-2017 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 BV404_RS03345 f2d96413ae7d3373da1a2b6124453a13 314 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 313 1.0E-30 T 09-03-2017 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 BV404_RS03345 f2d96413ae7d3373da1a2b6124453a13 314 SMART SM01400 4 121 5.7E-78 T 09-03-2017 BV404_RS03345 f2d96413ae7d3373da1a2b6124453a13 314 SUPERFAMILY SSF53271 69 306 1.28E-66 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like BV404_RS08070 7185523c954bff9dc86bcb7351b70224 795 SMART SM00896 701 794 1.7E-44 T 09-03-2017 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 BV404_RS08070 7185523c954bff9dc86bcb7351b70224 795 Gene3D G3DSA:3.30.56.20 402 475 2.1E-26 T 09-03-2017 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 BV404_RS08070 7185523c954bff9dc86bcb7351b70224 795 Gene3D G3DSA:3.50.40.10 199 392 2.3E-85 T 09-03-2017 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Reactome: R-HSA-379716 BV404_RS08070 7185523c954bff9dc86bcb7351b70224 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 1.6E-277 T 09-03-2017 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 BV404_RS08070 7185523c954bff9dc86bcb7351b70224 795 Pfam PF01588 Putative tRNA binding domain 45 145 2.7E-26 T 09-03-2017 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 BV404_RS08070 7185523c954bff9dc86bcb7351b70224 795 Gene3D G3DSA:3.30.56.10 155 184 7.4E-25 T 09-03-2017 BV404_RS08070 7185523c954bff9dc86bcb7351b70224 795 Gene3D G3DSA:3.30.56.10 1 38 7.4E-25 T 09-03-2017 BV404_RS08070 7185523c954bff9dc86bcb7351b70224 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 46.764 T 09-03-2017 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 BV404_RS08070 7185523c954bff9dc86bcb7351b70224 795 Gene3D G3DSA:3.30.930.10 493 689 4.2E-67 T 09-03-2017 BV404_RS08070 7185523c954bff9dc86bcb7351b70224 795 Gene3D G3DSA:2.40.50.140 42 154 2.5E-44 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS08070 7185523c954bff9dc86bcb7351b70224 795 SMART SM00873 212 385 3.4E-99 T 09-03-2017 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 BV404_RS08070 7185523c954bff9dc86bcb7351b70224 795 SUPERFAMILY SSF56037 195 394 9.42E-78 T 09-03-2017 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Reactome: R-HSA-379716 BV404_RS08070 7185523c954bff9dc86bcb7351b70224 795 SUPERFAMILY SSF46955 403 475 3.02E-19 T 09-03-2017 IPR009061 Putative DNA-binding domain BV404_RS08070 7185523c954bff9dc86bcb7351b70224 795 SUPERFAMILY SSF50249 38 196 1.42E-47 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS08070 7185523c954bff9dc86bcb7351b70224 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 9.4E-29 T 09-03-2017 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 BV404_RS08070 7185523c954bff9dc86bcb7351b70224 795 SUPERFAMILY SSF54991 697 794 2.48E-29 T 09-03-2017 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 BV404_RS08070 7185523c954bff9dc86bcb7351b70224 795 Gene3D G3DSA:3.30.70.380 703 794 3.7E-30 T 09-03-2017 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 BV404_RS08070 7185523c954bff9dc86bcb7351b70224 795 SMART SM00874 403 471 2.3E-29 T 09-03-2017 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 BV404_RS08070 7185523c954bff9dc86bcb7351b70224 795 Pfam PF03483 B3/4 domain 212 385 8.0E-72 T 09-03-2017 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 BV404_RS08070 7185523c954bff9dc86bcb7351b70224 795 Pfam PF03484 tRNA synthetase B5 domain 406 471 3.7E-18 T 09-03-2017 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 BV404_RS08070 7185523c954bff9dc86bcb7351b70224 795 SUPERFAMILY SSF55681 467 689 8.45E-55 T 09-03-2017 BV404_RS12690 aa1082617b68d9eafebec199b000bc19 447 Pfam PF00999 Sodium/hydrogen exchanger family 17 416 4.5E-56 T 09-03-2017 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 BV404_RS09440 b49dbcd49607d1a49caeb23eb26511b5 233 Gene3D G3DSA:3.30.420.40 4 133 2.5E-47 T 09-03-2017 BV404_RS09440 b49dbcd49607d1a49caeb23eb26511b5 233 SUPERFAMILY SSF53067 4 108 1.38E-31 T 09-03-2017 BV404_RS09440 b49dbcd49607d1a49caeb23eb26511b5 233 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 221 1.6E-68 T 09-03-2017 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 BV404_RS09440 b49dbcd49607d1a49caeb23eb26511b5 233 SUPERFAMILY SSF53067 112 219 1.55E-26 T 09-03-2017 BV404_RS09440 b49dbcd49607d1a49caeb23eb26511b5 233 Pfam PF00814 Glycoprotease family 30 134 2.6E-31 T 09-03-2017 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 BV404_RS03230 bdf80321984ad0882dc34289cc3c79c0 397 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 3.4E-11 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BV404_RS03230 bdf80321984ad0882dc34289cc3c79c0 397 Gene3D G3DSA:1.20.1330.10 302 349 1.1E-12 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BV404_RS03230 bdf80321984ad0882dc34289cc3c79c0 397 Gene3D G3DSA:1.20.1330.10 56 170 1.1E-12 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BV404_RS03230 bdf80321984ad0882dc34289cc3c79c0 397 SUPERFAMILY SSF64518 1 397 2.22E-68 T 09-03-2017 BV404_RS03230 bdf80321984ad0882dc34289cc3c79c0 397 Pfam PF00700 Bacterial flagellin C-terminal helical region 319 397 8.0E-6 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BV404_RS03230 bdf80321984ad0882dc34289cc3c79c0 397 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 4 397 2.5E-101 T 09-03-2017 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 BV404_RS02615 d6576c34fe69979f619f5765f12e59a8 453 SUPERFAMILY SSF51338 1 53 3.04E-16 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 BV404_RS02615 d6576c34fe69979f619f5765f12e59a8 453 SUPERFAMILY SSF51338 372 441 3.04E-16 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 BV404_RS02615 d6576c34fe69979f619f5765f12e59a8 453 Gene3D G3DSA:3.20.20.140 62 391 1.2E-89 T 09-03-2017 BV404_RS02615 d6576c34fe69979f619f5765f12e59a8 453 SUPERFAMILY SSF51556 53 371 4.17E-86 T 09-03-2017 IPR032466 Metal-dependent hydrolase BV404_RS02615 d6576c34fe69979f619f5765f12e59a8 453 Pfam PF01979 Amidohydrolase family 50 421 2.5E-49 T 09-03-2017 IPR006680 Amidohydrolase-related GO:0016787 BV404_RS02615 d6576c34fe69979f619f5765f12e59a8 453 Gene3D G3DSA:2.30.40.10 3 61 5.6E-14 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 BV404_RS08820 0358faa5ac29b75e900625efab8a20da 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 255 332 9.0E-39 T 09-03-2017 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 BV404_RS08820 0358faa5ac29b75e900625efab8a20da 334 Gene3D G3DSA:1.10.8.60 188 260 8.3E-34 T 09-03-2017 BV404_RS08820 0358faa5ac29b75e900625efab8a20da 334 SMART SM00382 56 183 3.6E-13 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS08820 0358faa5ac29b75e900625efab8a20da 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 28 331 9.1E-148 T 09-03-2017 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 BV404_RS08820 0358faa5ac29b75e900625efab8a20da 334 SUPERFAMILY SSF46785 262 333 1.83E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS08820 0358faa5ac29b75e900625efab8a20da 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 183.001 T 09-03-2017 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 BV404_RS08820 0358faa5ac29b75e900625efab8a20da 334 SUPERFAMILY SSF52540 25 256 6.68E-54 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS08820 0358faa5ac29b75e900625efab8a20da 334 Gene3D G3DSA:1.10.10.10 262 333 2.9E-35 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS08820 0358faa5ac29b75e900625efab8a20da 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 258 331 3.0E-33 T 09-03-2017 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 BV404_RS08820 0358faa5ac29b75e900625efab8a20da 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 16 240 4.5E-117 T 09-03-2017 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 BV404_RS08820 0358faa5ac29b75e900625efab8a20da 334 Gene3D G3DSA:3.40.50.300 25 182 1.1E-33 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09655 3e676a01bb6deceedad10ee68437808f 763 ProSitePatterns PS01047 Heavy-metal-associated domain. 74 103 - T 09-03-2017 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 BV404_RS09655 3e676a01bb6deceedad10ee68437808f 763 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 463 469 - T 09-03-2017 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 BV404_RS09655 3e676a01bb6deceedad10ee68437808f 763 PRINTS PR00941 Cadmium-transporting ATPase signature 245 265 2.7E-7 T 09-03-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BV404_RS09655 3e676a01bb6deceedad10ee68437808f 763 PRINTS PR00941 Cadmium-transporting ATPase signature 345 359 2.7E-7 T 09-03-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BV404_RS09655 3e676a01bb6deceedad10ee68437808f 763 PRINTS PR00941 Cadmium-transporting ATPase signature 72 81 2.7E-7 T 09-03-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BV404_RS09655 3e676a01bb6deceedad10ee68437808f 763 PRINTS PR00941 Cadmium-transporting ATPase signature 83 104 2.7E-7 T 09-03-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BV404_RS09655 3e676a01bb6deceedad10ee68437808f 763 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 679 691 2.1E-27 T 09-03-2017 BV404_RS09655 3e676a01bb6deceedad10ee68437808f 763 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 583 594 2.1E-27 T 09-03-2017 BV404_RS09655 3e676a01bb6deceedad10ee68437808f 763 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 310 324 2.1E-27 T 09-03-2017 BV404_RS09655 3e676a01bb6deceedad10ee68437808f 763 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 656 675 2.1E-27 T 09-03-2017 BV404_RS09655 3e676a01bb6deceedad10ee68437808f 763 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 461 475 2.1E-27 T 09-03-2017 BV404_RS09655 3e676a01bb6deceedad10ee68437808f 763 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 605 615 2.1E-27 T 09-03-2017 BV404_RS09655 3e676a01bb6deceedad10ee68437808f 763 Pfam PF00403 Heavy-metal-associated domain 73 131 2.4E-10 T 09-03-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 BV404_RS09655 3e676a01bb6deceedad10ee68437808f 763 Gene3D G3DSA:3.40.1110.10 475 585 2.4E-18 T 09-03-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 BV404_RS09655 3e676a01bb6deceedad10ee68437808f 763 Gene3D G3DSA:2.70.150.10 213 361 1.3E-25 T 09-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 BV404_RS09655 3e676a01bb6deceedad10ee68437808f 763 SUPERFAMILY SSF55008 66 133 5.63E-14 T 09-03-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 BV404_RS09655 3e676a01bb6deceedad10ee68437808f 763 SUPERFAMILY SSF81665 705 744 1.09E-19 T 09-03-2017 BV404_RS09655 3e676a01bb6deceedad10ee68437808f 763 SUPERFAMILY SSF81665 361 455 1.09E-19 T 09-03-2017 BV404_RS09655 3e676a01bb6deceedad10ee68437808f 763 SUPERFAMILY SSF81665 213 264 1.09E-19 T 09-03-2017 BV404_RS09655 3e676a01bb6deceedad10ee68437808f 763 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 210 521 3.4E-96 T 09-03-2017 BV404_RS09655 3e676a01bb6deceedad10ee68437808f 763 SUPERFAMILY SSF81653 263 360 3.27E-22 T 09-03-2017 BV404_RS09655 3e676a01bb6deceedad10ee68437808f 763 Gene3D G3DSA:3.30.70.100 67 131 1.4E-16 T 09-03-2017 BV404_RS09655 3e676a01bb6deceedad10ee68437808f 763 Pfam PF00122 E1-E2 ATPase 231 452 1.1E-61 T 09-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 BV404_RS09655 3e676a01bb6deceedad10ee68437808f 763 SUPERFAMILY SSF56784 555 756 3.25E-53 T 09-03-2017 IPR023214 HAD-like domain BV404_RS09655 3e676a01bb6deceedad10ee68437808f 763 SUPERFAMILY SSF56784 460 479 3.25E-53 T 09-03-2017 IPR023214 HAD-like domain BV404_RS09655 3e676a01bb6deceedad10ee68437808f 763 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 210 758 1.8E-175 T 09-03-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BV404_RS09655 3e676a01bb6deceedad10ee68437808f 763 Pfam PF00702 haloacid dehalogenase-like hydrolase 458 670 8.2E-39 T 09-03-2017 BV404_RS09655 3e676a01bb6deceedad10ee68437808f 763 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 233 734 5.5E-85 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 BV404_RS09655 3e676a01bb6deceedad10ee68437808f 763 Gene3D G3DSA:3.40.50.1000 586 722 4.0E-46 T 09-03-2017 IPR023214 HAD-like domain BV404_RS09655 3e676a01bb6deceedad10ee68437808f 763 Gene3D G3DSA:3.40.50.1000 435 474 4.0E-46 T 09-03-2017 IPR023214 HAD-like domain BV404_RS04485 0d8476b03a21575a9ad20dfe01cbdc2c 105 SUPERFAMILY SSF158757 8 84 5.75E-36 T 09-03-2017 IPR023163 SMc04008-like domain BV404_RS04485 0d8476b03a21575a9ad20dfe01cbdc2c 105 Pfam PF06844 Protein of unknown function (DUF1244) 35 101 7.6E-35 T 09-03-2017 IPR023163 SMc04008-like domain BV404_RS04485 0d8476b03a21575a9ad20dfe01cbdc2c 105 Gene3D G3DSA:1.10.3340.10 7 92 4.0E-43 T 09-03-2017 IPR023163 SMc04008-like domain BV404_RS00950 dca53f2d9216782b20aa5a5c580225ac 274 PIRSF PIRSF002158 13 274 1.9E-100 T 09-03-2017 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS00950 dca53f2d9216782b20aa5a5c580225ac 274 SUPERFAMILY SSF50249 2 125 7.54E-50 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS00950 dca53f2d9216782b20aa5a5c580225ac 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 46.94 T 09-03-2017 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS00950 dca53f2d9216782b20aa5a5c580225ac 274 Gene3D G3DSA:2.30.30.30 119 195 9.5E-33 T 09-03-2017 IPR014722 Ribosomal protein L2 domain 2 BV404_RS00950 dca53f2d9216782b20aa5a5c580225ac 274 SMART SM01383 42 118 2.2E-47 T 09-03-2017 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS00950 dca53f2d9216782b20aa5a5c580225ac 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 5.1E-56 T 09-03-2017 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 BV404_RS00950 dca53f2d9216782b20aa5a5c580225ac 274 Gene3D G3DSA:2.40.50.140 1 114 2.3E-50 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS00950 dca53f2d9216782b20aa5a5c580225ac 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 09-03-2017 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS00950 dca53f2d9216782b20aa5a5c580225ac 274 SUPERFAMILY SSF50104 127 272 2.89E-61 T 09-03-2017 IPR008991 Translation protein SH3-like domain BV404_RS00950 dca53f2d9216782b20aa5a5c580225ac 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 2.8E-130 T 09-03-2017 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS00950 dca53f2d9216782b20aa5a5c580225ac 274 SMART SM01382 124 252 3.2E-91 T 09-03-2017 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 BV404_RS00950 dca53f2d9216782b20aa5a5c580225ac 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 1.6E-34 T 09-03-2017 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS00950 dca53f2d9216782b20aa5a5c580225ac 274 Gene3D G3DSA:4.10.950.10 196 273 1.6E-35 T 09-03-2017 IPR014726 Ribosomal protein L2, domain 3 BV404_RS14820 215a882af912b448169f4d5b87499ae5 281 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 3 271 4.1E-119 T 09-03-2017 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 BV404_RS14820 215a882af912b448169f4d5b87499ae5 281 Pfam PF01694 Rhomboid family 134 269 8.1E-31 T 09-03-2017 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 BV404_RS14820 215a882af912b448169f4d5b87499ae5 281 Gene3D G3DSA:1.20.1540.10 98 268 6.6E-33 T 09-03-2017 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 BV404_RS14820 215a882af912b448169f4d5b87499ae5 281 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 87 8.4E-32 T 09-03-2017 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 BV404_RS14820 215a882af912b448169f4d5b87499ae5 281 SUPERFAMILY SSF144091 96 269 3.01E-40 T 09-03-2017 BV404_RS10980 8e29bbc0dbc12b1f3cbf8b46262ceee8 182 Pfam PF00857 Isochorismatase family 10 177 2.3E-40 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 BV404_RS10980 8e29bbc0dbc12b1f3cbf8b46262ceee8 182 SUPERFAMILY SSF52499 8 182 1.31E-47 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 BV404_RS10980 8e29bbc0dbc12b1f3cbf8b46262ceee8 182 Gene3D G3DSA:3.40.50.850 8 179 1.5E-47 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 BV404_RS00900 cc91b2fc1f65a7cc88b80ff3eff77dcf 313 SUPERFAMILY SSF56235 5 308 4.3E-96 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal BV404_RS00900 cc91b2fc1f65a7cc88b80ff3eff77dcf 313 Pfam PF01112 Asparaginase 6 307 1.1E-108 T 09-03-2017 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 BV404_RS08090 c8e88499873e58c8a3bc90620375cc91 382 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 202 366 5.3E-47 T 09-03-2017 IPR000160 GGDEF domain BV404_RS08090 c8e88499873e58c8a3bc90620375cc91 382 Gene3D G3DSA:3.30.70.270 208 368 1.6E-47 T 09-03-2017 BV404_RS08090 c8e88499873e58c8a3bc90620375cc91 382 SMART SM00267 195 367 1.1E-51 T 09-03-2017 IPR000160 GGDEF domain BV404_RS08090 c8e88499873e58c8a3bc90620375cc91 382 Gene3D G3DSA:1.20.120.50 1 131 3.8E-29 T 09-03-2017 IPR012827 Haemerythrin, metal-binding domain GO:0046872 BV404_RS08090 c8e88499873e58c8a3bc90620375cc91 382 SUPERFAMILY SSF47188 1 131 1.19E-26 T 09-03-2017 IPR012827 Haemerythrin, metal-binding domain GO:0046872 BV404_RS08090 c8e88499873e58c8a3bc90620375cc91 382 SUPERFAMILY SSF55073 211 366 3.69E-45 T 09-03-2017 IPR029787 Nucleotide cyclase BV404_RS08090 c8e88499873e58c8a3bc90620375cc91 382 Pfam PF01814 Hemerythrin HHE cation binding domain 13 128 2.8E-9 T 09-03-2017 IPR012312 Haemerythrin-like Reactome: R-HSA-390471 BV404_RS08090 c8e88499873e58c8a3bc90620375cc91 382 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 6 131 1.8E-29 T 09-03-2017 IPR012827 Haemerythrin, metal-binding domain GO:0046872 BV404_RS08090 c8e88499873e58c8a3bc90620375cc91 382 Pfam PF00990 Diguanylate cyclase, GGDEF domain 207 363 5.7E-43 T 09-03-2017 IPR000160 GGDEF domain BV404_RS07815 cbe3e20c6c0365f3ed53614747fe84ee 1983 SUPERFAMILY SSF81296 1391 1456 7.35E-8 T 09-03-2017 IPR014756 Immunoglobulin E-set BV404_RS07815 cbe3e20c6c0365f3ed53614747fe84ee 1983 Gene3D G3DSA:3.20.20.80 861 1084 9.4E-81 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 BV404_RS07815 cbe3e20c6c0365f3ed53614747fe84ee 1983 Gene3D G3DSA:3.20.20.80 1116 1207 9.4E-81 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 BV404_RS07815 cbe3e20c6c0365f3ed53614747fe84ee 1983 Gene3D G3DSA:3.20.20.80 1246 1267 9.4E-81 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 BV404_RS07815 cbe3e20c6c0365f3ed53614747fe84ee 1983 Gene3D G3DSA:3.20.20.80 1505 1900 2.7E-64 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 BV404_RS07815 cbe3e20c6c0365f3ed53614747fe84ee 1983 Gene3D G3DSA:3.20.20.80 742 809 9.4E-81 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 BV404_RS07815 cbe3e20c6c0365f3ed53614747fe84ee 1983 SUPERFAMILY SSF51445 1504 1842 1.26E-64 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily BV404_RS07815 cbe3e20c6c0365f3ed53614747fe84ee 1983 SUPERFAMILY SSF51445 1876 1903 1.26E-64 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily BV404_RS07815 cbe3e20c6c0365f3ed53614747fe84ee 1983 SUPERFAMILY SSF81296 481 601 1.29E-19 T 09-03-2017 IPR014756 Immunoglobulin E-set BV404_RS07815 cbe3e20c6c0365f3ed53614747fe84ee 1983 SUPERFAMILY SSF103647 288 365 1.96E-10 T 09-03-2017 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 BV404_RS07815 cbe3e20c6c0365f3ed53614747fe84ee 1983 SUPERFAMILY SSF103647 234 283 5.49E-7 T 09-03-2017 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 BV404_RS07815 cbe3e20c6c0365f3ed53614747fe84ee 1983 SMART SM00642 1511 1867 3.2E-25 T 09-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BV404_RS07815 cbe3e20c6c0365f3ed53614747fe84ee 1983 TIGRFAM TIGR02103 pullul_strch: alpha-1,6-glucosidases, pullulanase-type 491 1372 0.0 T 09-03-2017 IPR011839 Alpha-1,6-glucosidases, pullulanase-type GO:0005975|GO:0051060 BV404_RS07815 cbe3e20c6c0365f3ed53614747fe84ee 1983 Pfam PF00128 Alpha amylase, catalytic domain 1537 1622 2.8E-25 T 09-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BV404_RS07815 cbe3e20c6c0365f3ed53614747fe84ee 1983 Pfam PF00128 Alpha amylase, catalytic domain 1661 1837 2.2E-14 T 09-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BV404_RS07815 cbe3e20c6c0365f3ed53614747fe84ee 1983 Gene3D G3DSA:4.10.1080.10 235 365 2.6E-22 T 09-03-2017 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 BV404_RS07815 cbe3e20c6c0365f3ed53614747fe84ee 1983 Pfam PF11852 Domain of unknown function (DUF3372) 1208 1370 5.8E-56 T 09-03-2017 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal BV404_RS07815 cbe3e20c6c0365f3ed53614747fe84ee 1983 SUPERFAMILY SSF51445 714 1267 2.99E-126 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily BV404_RS07815 cbe3e20c6c0365f3ed53614747fe84ee 1983 Gene3D G3DSA:2.60.40.10 612 741 4.2E-15 T 09-03-2017 IPR013783 Immunoglobulin-like fold BV404_RS07815 cbe3e20c6c0365f3ed53614747fe84ee 1983 SUPERFAMILY SSF81296 610 717 3.2E-19 T 09-03-2017 IPR014756 Immunoglobulin E-set BV404_RS07815 cbe3e20c6c0365f3ed53614747fe84ee 1983 Pfam PF03714 Bacterial pullanase-associated domain 377 479 1.1E-17 T 09-03-2017 IPR005323 Bacterial pullanase-associated domain GO:0005975|GO:0030246 BV404_RS07815 cbe3e20c6c0365f3ed53614747fe84ee 1983 SUPERFAMILY SSF49452 371 477 1.57E-29 T 09-03-2017 IPR013784 Carbohydrate-binding-like fold GO:0030246 BV404_RS07815 cbe3e20c6c0365f3ed53614747fe84ee 1983 SUPERFAMILY SSF51011 1903 1982 3.27E-9 T 09-03-2017 BV404_RS07815 cbe3e20c6c0365f3ed53614747fe84ee 1983 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 615 701 7.7E-11 T 09-03-2017 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 BV404_RS07815 cbe3e20c6c0365f3ed53614747fe84ee 1983 Gene3D G3DSA:2.60.40.1180 1901 1980 1.4E-9 T 09-03-2017 IPR013780 Glycosyl hydrolase, all-beta BV404_RS07815 cbe3e20c6c0365f3ed53614747fe84ee 1983 Pfam PF16561 Glycogen recognition site of AMP-activated protein kinase 1392 1457 2.4E-6 T 09-03-2017 IPR032640 AMP-activated protein kinase, glycogen-binding domain Reactome: R-HSA-1445148|Reactome: R-HSA-1632852|Reactome: R-HSA-2151209|Reactome: R-HSA-380972|Reactome: R-HSA-5628897|Reactome: R-HSA-6804756 BV404_RS07815 cbe3e20c6c0365f3ed53614747fe84ee 1983 SUPERFAMILY SSF51011 1270 1382 2.88E-34 T 09-03-2017 BV404_RS11685 7324f4683151f5239387e0b253791008 495 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 26 491 2.0E-170 T 09-03-2017 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 BV404_RS11685 7324f4683151f5239387e0b253791008 495 Pfam PF08245 Mur ligase middle domain 117 318 3.2E-51 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 BV404_RS11685 7324f4683151f5239387e0b253791008 495 SUPERFAMILY SSF63418 8 108 6.15E-21 T 09-03-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 BV404_RS11685 7324f4683151f5239387e0b253791008 495 SUPERFAMILY SSF53244 340 491 2.44E-49 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BV404_RS11685 7324f4683151f5239387e0b253791008 495 SUPERFAMILY SSF53623 111 338 1.96E-73 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 BV404_RS11685 7324f4683151f5239387e0b253791008 495 Gene3D G3DSA:3.40.1390.10 9 108 1.5E-28 T 09-03-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 BV404_RS11685 7324f4683151f5239387e0b253791008 495 Pfam PF02875 Mur ligase family, glutamate ligase domain 341 424 6.9E-24 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BV404_RS11685 7324f4683151f5239387e0b253791008 495 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 5 491 33.744 T 09-03-2017 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 BV404_RS11685 7324f4683151f5239387e0b253791008 495 Gene3D G3DSA:3.90.190.20 343 485 2.7E-55 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BV404_RS11685 7324f4683151f5239387e0b253791008 495 Pfam PF01225 Mur ligase family, catalytic domain 27 105 4.6E-12 T 09-03-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 BV404_RS11685 7324f4683151f5239387e0b253791008 495 Gene3D G3DSA:3.40.1190.10 112 342 4.5E-76 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 BV404_RS11350 a6a750c7533c018e654386c1e252acd9 301 Pfam PF03466 LysR substrate binding domain 90 295 1.7E-30 T 09-03-2017 IPR005119 LysR, substrate-binding BV404_RS11350 a6a750c7533c018e654386c1e252acd9 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 5.6E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS11350 a6a750c7533c018e654386c1e252acd9 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 5.6E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS11350 a6a750c7533c018e654386c1e252acd9 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 5.6E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS11350 a6a750c7533c018e654386c1e252acd9 301 SUPERFAMILY SSF46785 6 80 2.22E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS11350 a6a750c7533c018e654386c1e252acd9 301 Gene3D G3DSA:3.40.190.10 94 180 1.2E-27 T 09-03-2017 BV404_RS11350 a6a750c7533c018e654386c1e252acd9 301 Gene3D G3DSA:1.10.10.10 4 87 7.6E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS11350 a6a750c7533c018e654386c1e252acd9 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 4.6E-19 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS11350 a6a750c7533c018e654386c1e252acd9 301 SUPERFAMILY SSF53850 91 298 2.35E-33 T 09-03-2017 BV404_RS11350 a6a750c7533c018e654386c1e252acd9 301 Gene3D G3DSA:3.40.190.10 181 261 1.3E-17 T 09-03-2017 BV404_RS01920 5b7ac34522871b47619ace8a7e724607 562 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 5 559 3.6E-239 T 09-03-2017 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 BV404_RS01920 5b7ac34522871b47619ace8a7e724607 562 Gene3D G3DSA:3.40.50.300 294 560 1.5E-100 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS01920 5b7ac34522871b47619ace8a7e724607 562 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 38 141 2.7E-16 T 09-03-2017 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 BV404_RS01920 5b7ac34522871b47619ace8a7e724607 562 Pfam PF00437 Type II/IV secretion system protein 188 455 3.2E-85 T 09-03-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 BV404_RS01920 5b7ac34522871b47619ace8a7e724607 562 SUPERFAMILY SSF160246 1 140 6.8E-32 T 09-03-2017 BV404_RS01920 5b7ac34522871b47619ace8a7e724607 562 Gene3D G3DSA:3.30.450.90 164 288 2.1E-50 T 09-03-2017 BV404_RS01920 5b7ac34522871b47619ace8a7e724607 562 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 383 397 - T 09-03-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 BV404_RS01920 5b7ac34522871b47619ace8a7e724607 562 SUPERFAMILY SSF52540 175 559 2.37E-97 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS03205 db9b118c0ca47faedc1fd3ddf7a05229 262 Pfam PF00460 Flagella basal body rod protein 5 35 4.0E-12 T 09-03-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BV404_RS03205 db9b118c0ca47faedc1fd3ddf7a05229 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 261 1.6E-116 T 09-03-2017 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 BV404_RS03205 db9b118c0ca47faedc1fd3ddf7a05229 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 09-03-2017 IPR019776 Flagellar basal body rod protein, conserved site BV404_RS03205 db9b118c0ca47faedc1fd3ddf7a05229 262 SUPERFAMILY SSF117143 92 223 1.29E-34 T 09-03-2017 BV404_RS03205 db9b118c0ca47faedc1fd3ddf7a05229 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 137 8.1E-40 T 09-03-2017 IPR020013 Fagellar hook-basal body protein, FlgE/F/G BV404_RS03205 db9b118c0ca47faedc1fd3ddf7a05229 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 149 244 5.4E-30 T 09-03-2017 IPR020013 Fagellar hook-basal body protein, FlgE/F/G BV404_RS03205 db9b118c0ca47faedc1fd3ddf7a05229 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 184 260 2.9E-24 T 09-03-2017 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BV404_RS08905 cfa9d10db8feeb67dd15d0dd1f116f6b 260 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 9 253 1.6E-87 T 09-03-2017 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 BV404_RS08905 cfa9d10db8feeb67dd15d0dd1f116f6b 260 Gene3D G3DSA:3.40.190.10 117 213 9.5E-26 T 09-03-2017 BV404_RS08905 cfa9d10db8feeb67dd15d0dd1f116f6b 260 SUPERFAMILY SSF53850 3 257 1.3E-72 T 09-03-2017 BV404_RS08905 cfa9d10db8feeb67dd15d0dd1f116f6b 260 SMART SM00062 28 256 5.9E-72 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BV404_RS08905 cfa9d10db8feeb67dd15d0dd1f116f6b 260 SMART SM00079 28 255 5.9E-5 T 09-03-2017 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 BV404_RS08905 cfa9d10db8feeb67dd15d0dd1f116f6b 260 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 51 64 - T 09-03-2017 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 BV404_RS08905 cfa9d10db8feeb67dd15d0dd1f116f6b 260 Gene3D G3DSA:3.40.190.10 215 258 2.2E-46 T 09-03-2017 BV404_RS08905 cfa9d10db8feeb67dd15d0dd1f116f6b 260 Gene3D G3DSA:3.40.190.10 25 114 2.2E-46 T 09-03-2017 BV404_RS08905 cfa9d10db8feeb67dd15d0dd1f116f6b 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 254 1.0E-63 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BV404_RS04675 0512031d999ca51e944b32c23080de12 89 PIRSF PIRSF004669 1 89 5.4E-26 T 09-03-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BV404_RS04675 0512031d999ca51e944b32c23080de12 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 7.1E-26 T 09-03-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BV404_RS04675 0512031d999ca51e944b32c23080de12 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 1.0E-12 T 09-03-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BV404_RS04675 0512031d999ca51e944b32c23080de12 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 1.0E-12 T 09-03-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BV404_RS04675 0512031d999ca51e944b32c23080de12 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 1.0E-12 T 09-03-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BV404_RS04675 0512031d999ca51e944b32c23080de12 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 2.0E-29 T 09-03-2017 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 BV404_RS12200 0a20c10c834fae21fc3fa6c24438e311 161 Gene3D G3DSA:3.90.960.10 5 158 3.2E-36 T 09-03-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 BV404_RS12200 0a20c10c834fae21fc3fa6c24438e311 161 Pfam PF04073 Aminoacyl-tRNA editing domain 35 148 2.0E-21 T 09-03-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 BV404_RS12200 0a20c10c834fae21fc3fa6c24438e311 161 SUPERFAMILY SSF55826 8 153 5.36E-31 T 09-03-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 BV404_RS12165 70be37813b38300ced3298b6e4290350 253 SUPERFAMILY SSF100950 79 234 2.09E-31 T 09-03-2017 BV404_RS12165 70be37813b38300ced3298b6e4290350 253 Pfam PF00455 DeoR C terminal sensor domain 78 233 7.1E-45 T 09-03-2017 IPR014036 DeoR C-terminal sensor domain BV404_RS12165 70be37813b38300ced3298b6e4290350 253 Gene3D G3DSA:3.40.50.1360 78 217 1.9E-15 T 09-03-2017 BV404_RS12165 70be37813b38300ced3298b6e4290350 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 1.5E-5 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BV404_RS12165 70be37813b38300ced3298b6e4290350 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 1.5E-5 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BV404_RS12165 70be37813b38300ced3298b6e4290350 253 SMART SM01134 73 234 1.1E-58 T 09-03-2017 BV404_RS12165 70be37813b38300ced3298b6e4290350 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 09-03-2017 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 BV404_RS12165 70be37813b38300ced3298b6e4290350 253 SMART SM00420 9 61 7.1E-15 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BV404_RS12165 70be37813b38300ced3298b6e4290350 253 Pfam PF08220 DeoR-like helix-turn-helix domain 9 61 8.4E-16 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BV404_RS12165 70be37813b38300ced3298b6e4290350 253 SUPERFAMILY SSF46785 9 64 8.86E-12 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS12165 70be37813b38300ced3298b6e4290350 253 Gene3D G3DSA:1.10.10.10 5 54 4.1E-7 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS09180 68c66ab8bec7c4341741d1a1eac95186 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.2E-20 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 BV404_RS09180 68c66ab8bec7c4341741d1a1eac95186 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.2E-20 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 BV404_RS09180 68c66ab8bec7c4341741d1a1eac95186 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.2E-20 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 BV404_RS09180 68c66ab8bec7c4341741d1a1eac95186 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.4E-33 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 BV404_RS09180 68c66ab8bec7c4341741d1a1eac95186 90 SUPERFAMILY SSF47729 1 90 5.74E-32 T 09-03-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 BV404_RS09180 68c66ab8bec7c4341741d1a1eac95186 90 Gene3D G3DSA:4.10.520.10 1 90 8.9E-37 T 09-03-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 BV404_RS09180 68c66ab8bec7c4341741d1a1eac95186 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 09-03-2017 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 BV404_RS09180 68c66ab8bec7c4341741d1a1eac95186 90 SMART SM00411 1 90 8.1E-44 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 BV404_RS05740 b48545d851cee212f6732b376307ed11 426 Gene3D G3DSA:3.65.10.10 22 238 2.4E-70 T 09-03-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 BV404_RS05740 b48545d851cee212f6732b376307ed11 426 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 426 34.103 T 09-03-2017 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 BV404_RS05740 b48545d851cee212f6732b376307ed11 426 SUPERFAMILY SSF55205 1 424 3.46E-142 T 09-03-2017 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 BV404_RS05740 b48545d851cee212f6732b376307ed11 426 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 420 7.3E-155 T 09-03-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 BV404_RS05740 b48545d851cee212f6732b376307ed11 426 Gene3D G3DSA:3.65.10.10 239 424 5.3E-74 T 09-03-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 BV404_RS05740 b48545d851cee212f6732b376307ed11 426 PIRSF PIRSF000505 1 426 6.2E-155 T 09-03-2017 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 BV404_RS05740 b48545d851cee212f6732b376307ed11 426 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 09-03-2017 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 BV404_RS05740 b48545d851cee212f6732b376307ed11 426 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 425 2.2E-142 T 09-03-2017 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 BV404_RS05740 b48545d851cee212f6732b376307ed11 426 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 09-03-2017 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 BV404_RS03360 16c31eae7b2469dc25f9c0cde8f62547 419 SUPERFAMILY SSF69742 1 156 2.35E-48 T 09-03-2017 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BV404_RS03360 16c31eae7b2469dc25f9c0cde8f62547 419 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 415 5.8E-146 T 09-03-2017 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BV404_RS03360 16c31eae7b2469dc25f9c0cde8f62547 419 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 170 304 1.0E-49 T 09-03-2017 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase BV404_RS03360 16c31eae7b2469dc25f9c0cde8f62547 419 Gene3D G3DSA:3.40.50.720 182 356 2.0E-37 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS03360 16c31eae7b2469dc25f9c0cde8f62547 419 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 416 30.56 T 09-03-2017 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BV404_RS03360 16c31eae7b2469dc25f9c0cde8f62547 419 PIRSF PIRSF000445 1 419 7.2E-157 T 09-03-2017 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BV404_RS03360 16c31eae7b2469dc25f9c0cde8f62547 419 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 154 9.9E-52 T 09-03-2017 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BV404_RS03360 16c31eae7b2469dc25f9c0cde8f62547 419 SUPERFAMILY SSF51735 161 313 1.39E-35 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS03360 16c31eae7b2469dc25f9c0cde8f62547 419 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 318 414 2.4E-22 T 09-03-2017 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BV404_RS03360 16c31eae7b2469dc25f9c0cde8f62547 419 SUPERFAMILY SSF69075 315 416 3.4E-27 T 09-03-2017 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BV404_RS03360 16c31eae7b2469dc25f9c0cde8f62547 419 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 97 120 - T 09-03-2017 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BV404_RS03010 6ce34d32665ffb0731cd9767d264e4b0 250 Pfam PF08241 Methyltransferase domain 74 125 1.3E-10 T 09-03-2017 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 BV404_RS03010 6ce34d32665ffb0731cd9767d264e4b0 250 Gene3D G3DSA:3.40.50.150 75 213 2.3E-17 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS03010 6ce34d32665ffb0731cd9767d264e4b0 250 SUPERFAMILY SSF53335 73 212 2.22E-20 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS14130 b330eebcab1131de937e05877fa5dde4 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 1.0E-37 T 09-03-2017 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS14130 b330eebcab1131de937e05877fa5dde4 366 SUPERFAMILY SSF55979 1 118 1.85E-28 T 09-03-2017 BV404_RS14130 b330eebcab1131de937e05877fa5dde4 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 243 3.3E-34 T 09-03-2017 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS14130 b330eebcab1131de937e05877fa5dde4 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 1.7E-107 T 09-03-2017 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS14130 b330eebcab1131de937e05877fa5dde4 366 PIRSF PIRSF000804 1 366 4.2E-117 T 09-03-2017 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS14130 b330eebcab1131de937e05877fa5dde4 366 SMART SM00480 17 362 1.3E-144 T 09-03-2017 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS14130 b330eebcab1131de937e05877fa5dde4 366 SUPERFAMILY SSF55979 245 366 7.85E-37 T 09-03-2017 BV404_RS14130 b330eebcab1131de937e05877fa5dde4 366 Gene3D G3DSA:3.10.150.10 249 366 1.2E-38 T 09-03-2017 BV404_RS14130 b330eebcab1131de937e05877fa5dde4 366 Gene3D G3DSA:3.10.150.10 1 121 1.4E-32 T 09-03-2017 BV404_RS14130 b330eebcab1131de937e05877fa5dde4 366 SUPERFAMILY SSF55979 126 244 1.69E-28 T 09-03-2017 BV404_RS14130 b330eebcab1131de937e05877fa5dde4 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 3.3E-39 T 09-03-2017 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS14130 b330eebcab1131de937e05877fa5dde4 366 Gene3D G3DSA:3.10.150.10 122 248 3.1E-36 T 09-03-2017 BV404_RS14220 70dd7aa735ecacea8eddad57e0a14837 156 SUPERFAMILY SSF81573 63 121 2.75E-14 T 09-03-2017 IPR028987 F-type ATP synthase subunit B-like, membrane domain BV404_RS14220 70dd7aa735ecacea8eddad57e0a14837 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 1.2E-59 T 09-03-2017 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 BV404_RS14220 70dd7aa735ecacea8eddad57e0a14837 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 156 13.182 T 09-03-2017 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 BV404_RS14220 70dd7aa735ecacea8eddad57e0a14837 156 Gene3D G3DSA:1.20.5.620 63 122 4.7E-23 T 09-03-2017 IPR028987 F-type ATP synthase subunit B-like, membrane domain BV404_RS14220 70dd7aa735ecacea8eddad57e0a14837 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 6.8E-35 T 09-03-2017 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 BV404_RS05995 48a8129ab7316ed4c1643787199a16a3 346 Gene3D G3DSA:2.40.50.100 62 91 4.2E-16 T 09-03-2017 BV404_RS05995 48a8129ab7316ed4c1643787199a16a3 346 Gene3D G3DSA:2.40.50.100 152 184 4.2E-16 T 09-03-2017 BV404_RS05995 48a8129ab7316ed4c1643787199a16a3 346 SUPERFAMILY SSF111369 48 266 5.62E-32 T 09-03-2017 BV404_RS05995 48a8129ab7316ed4c1643787199a16a3 346 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 252 3.0E-11 T 09-03-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BV404_RS05995 48a8129ab7316ed4c1643787199a16a3 346 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 340 4.3E-88 T 09-03-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 BV404_RS00300 b3e24b2fecf3194423950efe5594d1f5 769 SUPERFAMILY SSF158832 3 321 1.2E-119 T 09-03-2017 BV404_RS00300 b3e24b2fecf3194423950efe5594d1f5 769 Gene3D G3DSA:1.10.150.310 499 630 4.3E-47 T 09-03-2017 IPR023097 Tex RuvX-like domain BV404_RS00300 b3e24b2fecf3194423950efe5594d1f5 769 Pfam PF00575 S1 RNA binding domain 648 720 4.4E-21 T 09-03-2017 IPR003029 S1 domain GO:0003676 BV404_RS00300 b3e24b2fecf3194423950efe5594d1f5 769 SMART SM00732 326 424 4.3E-38 T 09-03-2017 IPR006641 YqgF/RNase H-like domain GO:0006139 BV404_RS00300 b3e24b2fecf3194423950efe5594d1f5 769 Gene3D G3DSA:1.10.10.650 3 109 1.9E-46 T 09-03-2017 IPR023319 Tex-like protein, HTH domain BV404_RS00300 b3e24b2fecf3194423950efe5594d1f5 769 SUPERFAMILY SSF47781 560 632 1.13E-18 T 09-03-2017 IPR010994 RuvA domain 2-like BV404_RS00300 b3e24b2fecf3194423950efe5594d1f5 769 SMART SM00316 649 720 9.0E-25 T 09-03-2017 IPR022967 RNA-binding domain, S1 BV404_RS00300 b3e24b2fecf3194423950efe5594d1f5 769 Pfam PF12836 Helix-hairpin-helix motif 491 555 1.8E-28 T 09-03-2017 BV404_RS00300 b3e24b2fecf3194423950efe5594d1f5 769 Gene3D G3DSA:1.10.3500.10 110 322 2.6E-101 T 09-03-2017 IPR023323 Tex-like domain BV404_RS00300 b3e24b2fecf3194423950efe5594d1f5 769 Gene3D G3DSA:1.10.3500.10 451 498 2.6E-101 T 09-03-2017 IPR023323 Tex-like domain BV404_RS00300 b3e24b2fecf3194423950efe5594d1f5 769 SUPERFAMILY SSF53098 322 469 5.54E-52 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 BV404_RS00300 b3e24b2fecf3194423950efe5594d1f5 769 SUPERFAMILY SSF50249 642 720 9.7E-24 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS00300 b3e24b2fecf3194423950efe5594d1f5 769 Gene3D G3DSA:2.40.50.140 634 720 6.8E-28 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS00300 b3e24b2fecf3194423950efe5594d1f5 769 SUPERFAMILY SSF47781 470 557 3.89E-28 T 09-03-2017 IPR010994 RuvA domain 2-like BV404_RS00300 b3e24b2fecf3194423950efe5594d1f5 769 Gene3D G3DSA:3.30.420.140 327 450 1.6E-53 T 09-03-2017 IPR006641 YqgF/RNase H-like domain GO:0006139 BV404_RS00300 b3e24b2fecf3194423950efe5594d1f5 769 Pfam PF16921 Tex protein YqgF-like domain 327 451 5.3E-56 T 09-03-2017 IPR032639 Tex protein, YqgF-like domain BV404_RS00300 b3e24b2fecf3194423950efe5594d1f5 769 Pfam PF09371 Tex-like protein N-terminal domain 9 193 1.7E-70 T 09-03-2017 IPR018974 Tex-like protein, N-terminal BV404_RS01720 c0060667affb179414fb1309e9ed3890 190 Gene3D G3DSA:1.10.1740.10 2 111 1.4E-38 T 09-03-2017 BV404_RS01720 c0060667affb179414fb1309e9ed3890 190 Pfam PF08281 Sigma-70, region 4 130 181 4.9E-18 T 09-03-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS01720 c0060667affb179414fb1309e9ed3890 190 SUPERFAMILY SSF88946 2 107 3.92E-33 T 09-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS01720 c0060667affb179414fb1309e9ed3890 190 SUPERFAMILY SSF88659 124 186 3.18E-17 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS01720 c0060667affb179414fb1309e9ed3890 190 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 2 190 5.7E-102 T 09-03-2017 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS01720 c0060667affb179414fb1309e9ed3890 190 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 185 2.1E-33 T 09-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS01720 c0060667affb179414fb1309e9ed3890 190 Pfam PF04542 Sigma-70 region 2 25 92 7.6E-19 T 09-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS01720 c0060667affb179414fb1309e9ed3890 190 Gene3D G3DSA:1.10.10.10 125 188 2.0E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS14730 6615a19651f6158752f04d9a1d188e7e 111 Gene3D G3DSA:1.10.10.10 5 82 2.7E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS14730 6615a19651f6158752f04d9a1d188e7e 111 Pfam PF01022 Bacterial regulatory protein, arsR family 12 56 2.8E-11 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BV404_RS14730 6615a19651f6158752f04d9a1d188e7e 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 5.2E-21 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BV404_RS14730 6615a19651f6158752f04d9a1d188e7e 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 5.2E-21 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BV404_RS14730 6615a19651f6158752f04d9a1d188e7e 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 5.2E-21 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BV404_RS14730 6615a19651f6158752f04d9a1d188e7e 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 38 5.2E-21 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BV404_RS14730 6615a19651f6158752f04d9a1d188e7e 111 SUPERFAMILY SSF46785 5 86 7.55E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS14730 6615a19651f6158752f04d9a1d188e7e 111 SMART SM00418 5 83 1.3E-25 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BV404_RS08845 8251418c907121db7f3af8cd45f6a27f 243 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 240 119.145 T 09-03-2017 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 BV404_RS08845 8251418c907121db7f3af8cd45f6a27f 243 SUPERFAMILY SSF56300 1 223 4.43E-34 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like BV404_RS08845 8251418c907121db7f3af8cd45f6a27f 243 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 231 6.8E-109 T 09-03-2017 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 BV404_RS08845 8251418c907121db7f3af8cd45f6a27f 243 Pfam PF00149 Calcineurin-like phosphoesterase 1 199 1.6E-12 T 09-03-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 BV404_RS08845 8251418c907121db7f3af8cd45f6a27f 243 Gene3D G3DSA:3.60.21.10 173 209 5.6E-21 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like BV404_RS08845 8251418c907121db7f3af8cd45f6a27f 243 Gene3D G3DSA:3.60.21.10 1 125 5.6E-21 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like BV404_RS12880 974bc84f79382ce8340c2e021e24b3f2 91 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 3 91 8.2E-22 T 09-03-2017 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 BV404_RS12880 974bc84f79382ce8340c2e021e24b3f2 91 Pfam PF04077 DsrH like protein 9 87 9.7E-21 T 09-03-2017 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 BV404_RS12880 974bc84f79382ce8340c2e021e24b3f2 91 SUPERFAMILY SSF75169 2 91 6.18E-22 T 09-03-2017 IPR027396 DsrEFH-like BV404_RS12880 974bc84f79382ce8340c2e021e24b3f2 91 Gene3D G3DSA:3.40.1260.10 2 90 8.7E-21 T 09-03-2017 IPR027396 DsrEFH-like BV404_RS03750 ffeca88bf23463a5a38951edd40484ef 254 PRINTS PR00412 Epoxide hydrolase signature 230 252 1.6E-5 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 BV404_RS03750 ffeca88bf23463a5a38951edd40484ef 254 PRINTS PR00412 Epoxide hydrolase signature 39 54 1.6E-5 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 BV404_RS03750 ffeca88bf23463a5a38951edd40484ef 254 PRINTS PR00412 Epoxide hydrolase signature 82 95 1.6E-5 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 BV404_RS03750 ffeca88bf23463a5a38951edd40484ef 254 Pfam PF12697 Alpha/beta hydrolase family 16 247 3.5E-23 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 BV404_RS03750 ffeca88bf23463a5a38951edd40484ef 254 SUPERFAMILY SSF53474 5 253 2.75E-50 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold BV404_RS03750 ffeca88bf23463a5a38951edd40484ef 254 Gene3D G3DSA:3.40.50.1820 5 253 7.4E-49 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold BV404_RS03750 ffeca88bf23463a5a38951edd40484ef 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 82 95 8.5E-6 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 BV404_RS03750 ffeca88bf23463a5a38951edd40484ef 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 39 54 8.5E-6 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 BV404_RS03750 ffeca88bf23463a5a38951edd40484ef 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 96 109 8.5E-6 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 BV404_RS03750 ffeca88bf23463a5a38951edd40484ef 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 199 213 8.5E-6 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 BV404_RS14125 7972d7676a46ecd3c388a4ca263a0dc5 359 ProSitePatterns PS00618 RecF protein signature 2. 299 317 - T 09-03-2017 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 BV404_RS14125 7972d7676a46ecd3c388a4ca263a0dc5 359 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 356 5.4E-118 T 09-03-2017 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 BV404_RS14125 7972d7676a46ecd3c388a4ca263a0dc5 359 Gene3D G3DSA:3.40.50.300 231 340 2.3E-40 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS14125 7972d7676a46ecd3c388a4ca263a0dc5 359 Gene3D G3DSA:3.40.50.300 1 172 2.3E-40 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS14125 7972d7676a46ecd3c388a4ca263a0dc5 359 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 359 97.413 T 09-03-2017 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 BV404_RS14125 7972d7676a46ecd3c388a4ca263a0dc5 359 SUPERFAMILY SSF52540 1 340 8.88E-41 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS14125 7972d7676a46ecd3c388a4ca263a0dc5 359 ProSitePatterns PS00617 RecF protein signature 1. 118 138 - T 09-03-2017 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 BV404_RS14125 7972d7676a46ecd3c388a4ca263a0dc5 359 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 355 9.9E-36 T 09-03-2017 IPR003395 RecF/RecN/SMC, N-terminal BV404_RS06125 1c2cb6655962c17fbd7b5485c9467603 308 SMART SM00382 30 212 2.9E-16 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS06125 1c2cb6655962c17fbd7b5485c9467603 308 Gene3D G3DSA:3.40.50.300 2 228 1.4E-74 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS06125 1c2cb6655962c17fbd7b5485c9467603 308 Pfam PF00005 ABC transporter 22 165 8.0E-35 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS06125 1c2cb6655962c17fbd7b5485c9467603 308 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS06125 1c2cb6655962c17fbd7b5485c9467603 308 SUPERFAMILY SSF52540 5 228 3.66E-67 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS00175 7c59c98b36419486cb758e01b61c39ef 144 SUPERFAMILY SSF69500 2 143 4.05E-53 T 09-03-2017 IPR023509 D-Tyr tRNAtyr deacylase-like domain BV404_RS00175 7c59c98b36419486cb758e01b61c39ef 144 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 142 1.8E-49 T 09-03-2017 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 BV404_RS00175 7c59c98b36419486cb758e01b61c39ef 144 Gene3D G3DSA:3.50.80.10 3 143 3.5E-52 T 09-03-2017 IPR023509 D-Tyr tRNAtyr deacylase-like domain BV404_RS00175 7c59c98b36419486cb758e01b61c39ef 144 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 2 143 7.9E-62 T 09-03-2017 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 BV404_RS00175 7c59c98b36419486cb758e01b61c39ef 144 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 144 33.028 T 09-03-2017 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 BV404_RS13850 98f5099780cede650c9d8fe3f827050c 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 1.2E-14 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BV404_RS13850 98f5099780cede650c9d8fe3f827050c 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 3.9E-10 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BV404_RS13850 98f5099780cede650c9d8fe3f827050c 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 3.9E-10 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BV404_RS13850 98f5099780cede650c9d8fe3f827050c 192 Gene3D G3DSA:1.10.357.10 6 190 2.1E-32 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 BV404_RS13850 98f5099780cede650c9d8fe3f827050c 192 SUPERFAMILY SSF46689 4 82 6.48E-18 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS13850 98f5099780cede650c9d8fe3f827050c 192 ProSitePatterns PS01081 TetR-type HTH domain signature. 24 55 - T 09-03-2017 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BV404_RS13850 98f5099780cede650c9d8fe3f827050c 192 Pfam PF16295 Tetracycline repressor, C-terminal all-alpha domain 64 189 9.0E-8 T 09-03-2017 IPR032551 HTH-type transcriptional repressor, C-terminal BV404_RS13845 98f0ec2a64587b9e3b25d103e830bde6 671 Gene3D G3DSA:3.40.50.300 182 279 1.6E-66 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS13845 98f0ec2a64587b9e3b25d103e830bde6 671 Gene3D G3DSA:3.40.50.300 2 104 1.6E-66 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS13845 98f0ec2a64587b9e3b25d103e830bde6 671 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 2.3E-78 T 09-03-2017 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 BV404_RS13845 98f0ec2a64587b9e3b25d103e830bde6 671 Gene3D G3DSA:3.40.50.300 280 382 3.5E-63 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS13845 98f0ec2a64587b9e3b25d103e830bde6 671 Gene3D G3DSA:3.40.50.300 552 642 3.5E-63 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS13845 98f0ec2a64587b9e3b25d103e830bde6 671 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 670 40.629 T 09-03-2017 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 BV404_RS13845 98f0ec2a64587b9e3b25d103e830bde6 671 Gene3D G3DSA:1.10.486.10 383 517 1.3E-42 T 09-03-2017 BV404_RS13845 98f0ec2a64587b9e3b25d103e830bde6 671 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 669 0.0 T 09-03-2017 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 BV404_RS13845 98f0ec2a64587b9e3b25d103e830bde6 671 Pfam PF13361 UvrD-like helicase C-terminal domain 271 615 1.5E-75 T 09-03-2017 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 BV404_RS13845 98f0ec2a64587b9e3b25d103e830bde6 671 Gene3D G3DSA:1.10.10.160 108 181 1.2E-25 T 09-03-2017 IPR013986 DExx box DNA helicase domain BV404_RS13845 98f0ec2a64587b9e3b25d103e830bde6 671 SUPERFAMILY SSF52540 1 640 4.95E-164 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS14045 cc7e7aeec3c3621600f781e0b3734f5d 548 Gene3D G3DSA:3.40.50.970 345 546 2.2E-70 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold BV404_RS14045 cc7e7aeec3c3621600f781e0b3734f5d 548 Gene3D G3DSA:3.40.50.970 1 172 7.5E-71 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold BV404_RS14045 cc7e7aeec3c3621600f781e0b3734f5d 548 SUPERFAMILY SSF52518 1 177 8.14E-61 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold BV404_RS14045 cc7e7aeec3c3621600f781e0b3734f5d 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 188 322 8.7E-40 T 09-03-2017 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 BV404_RS14045 cc7e7aeec3c3621600f781e0b3734f5d 548 Gene3D G3DSA:3.40.50.1220 178 340 6.9E-54 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain BV404_RS14045 cc7e7aeec3c3621600f781e0b3734f5d 548 SUPERFAMILY SSF52518 358 545 4.65E-64 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold BV404_RS14045 cc7e7aeec3c3621600f781e0b3734f5d 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 375 523 6.3E-48 T 09-03-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 BV404_RS14045 cc7e7aeec3c3621600f781e0b3734f5d 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 166 7.0E-55 T 09-03-2017 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 BV404_RS14045 cc7e7aeec3c3621600f781e0b3734f5d 548 SUPERFAMILY SSF52467 180 341 1.71E-54 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain BV404_RS14045 cc7e7aeec3c3621600f781e0b3734f5d 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 412 431 - T 09-03-2017 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 BV404_RS14045 cc7e7aeec3c3621600f781e0b3734f5d 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 546 4.4E-208 T 09-03-2017 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 BV404_RS07525 eb82cd1fa6cd5ec702ef461e4968824a 638 Gene3D G3DSA:3.30.420.40 235 327 8.4E-19 T 09-03-2017 BV404_RS07525 eb82cd1fa6cd5ec702ef461e4968824a 638 SUPERFAMILY SSF53067 223 373 4.94E-26 T 09-03-2017 BV404_RS07525 eb82cd1fa6cd5ec702ef461e4968824a 638 SUPERFAMILY SSF53067 418 477 4.94E-26 T 09-03-2017 BV404_RS07525 eb82cd1fa6cd5ec702ef461e4968824a 638 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 228 241 - T 09-03-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 BV404_RS07525 eb82cd1fa6cd5ec702ef461e4968824a 638 PRINTS PR00301 70kDa heat shock protein signature 234 244 1.4E-8 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BV404_RS07525 eb82cd1fa6cd5ec702ef461e4968824a 638 PRINTS PR00301 70kDa heat shock protein signature 16 29 1.4E-8 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BV404_RS07525 eb82cd1fa6cd5ec702ef461e4968824a 638 PRINTS PR00301 70kDa heat shock protein signature 418 438 1.4E-8 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BV404_RS07525 eb82cd1fa6cd5ec702ef461e4968824a 638 PRINTS PR00301 70kDa heat shock protein signature 167 187 1.4E-8 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BV404_RS07525 eb82cd1fa6cd5ec702ef461e4968824a 638 SUPERFAMILY SSF53067 16 209 8.75E-28 T 09-03-2017 BV404_RS07525 eb82cd1fa6cd5ec702ef461e4968824a 638 Pfam PF00012 Hsp70 protein 18 348 1.4E-17 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BV404_RS07525 eb82cd1fa6cd5ec702ef461e4968824a 638 Gene3D G3DSA:3.30.420.40 16 106 7.0E-32 T 09-03-2017 BV404_RS07525 eb82cd1fa6cd5ec702ef461e4968824a 638 Gene3D G3DSA:3.30.420.40 145 234 7.0E-32 T 09-03-2017 BV404_RS07525 eb82cd1fa6cd5ec702ef461e4968824a 638 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 20 27 - T 09-03-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 BV404_RS08675 cbfba9accb464d5650e3fc4cb47b1361 301 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 151 299 8.0E-62 T 09-03-2017 IPR005642 Lysine exporter LysO BV404_RS08675 cbfba9accb464d5650e3fc4cb47b1361 301 Pfam PF03956 Membrane protein of unknown function (DUF340) 112 297 2.0E-52 T 09-03-2017 IPR005642 Lysine exporter LysO BV404_RS11935 366245c189031fd74b4d55ea92e05b14 350 PRINTS PR00142 RecA protein signature 210 238 7.9E-85 T 09-03-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BV404_RS11935 366245c189031fd74b4d55ea92e05b14 350 PRINTS PR00142 RecA protein signature 127 156 7.9E-85 T 09-03-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BV404_RS11935 366245c189031fd74b4d55ea92e05b14 350 PRINTS PR00142 RecA protein signature 243 272 7.9E-85 T 09-03-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BV404_RS11935 366245c189031fd74b4d55ea92e05b14 350 PRINTS PR00142 RecA protein signature 93 122 7.9E-85 T 09-03-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BV404_RS11935 366245c189031fd74b4d55ea92e05b14 350 PRINTS PR00142 RecA protein signature 297 314 7.9E-85 T 09-03-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BV404_RS11935 366245c189031fd74b4d55ea92e05b14 350 PRINTS PR00142 RecA protein signature 165 194 7.9E-85 T 09-03-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BV404_RS11935 366245c189031fd74b4d55ea92e05b14 350 ProSitePatterns PS00321 recA signature. 213 221 - T 09-03-2017 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 BV404_RS11935 366245c189031fd74b4d55ea92e05b14 350 SUPERFAMILY SSF52540 4 266 5.17E-66 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11935 366245c189031fd74b4d55ea92e05b14 350 Hamap MF_00268 Protein RecA [recA]. 5 329 50.356 T 09-03-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BV404_RS11935 366245c189031fd74b4d55ea92e05b14 350 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 6.9E-169 T 09-03-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BV404_RS11935 366245c189031fd74b4d55ea92e05b14 350 SMART SM00382 57 228 1.6E-8 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS11935 366245c189031fd74b4d55ea92e05b14 350 Pfam PF00154 recA bacterial DNA recombination protein 7 267 1.9E-142 T 09-03-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BV404_RS11935 366245c189031fd74b4d55ea92e05b14 350 Gene3D G3DSA:3.40.50.300 26 267 8.4E-84 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11935 366245c189031fd74b4d55ea92e05b14 350 Gene3D G3DSA:3.30.250.10 268 326 1.5E-27 T 09-03-2017 IPR023400 DNA recombination and repair protein RecA, C-terminal BV404_RS11935 366245c189031fd74b4d55ea92e05b14 350 SUPERFAMILY SSF54752 269 325 1.31E-20 T 09-03-2017 IPR023400 DNA recombination and repair protein RecA, C-terminal BV404_RS05715 3d675ca3156d93c6f50d10e7f33f74fb 755 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 304 316 - T 09-03-2017 IPR018368 ClpA/B, conserved site 1 GO:0005524 BV404_RS05715 3d675ca3156d93c6f50d10e7f33f74fb 755 SUPERFAMILY SSF52540 439 743 1.84E-72 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS05715 3d675ca3156d93c6f50d10e7f33f74fb 755 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 597 611 1.6E-35 T 09-03-2017 IPR001270 ClpA/B family GO:0005524 BV404_RS05715 3d675ca3156d93c6f50d10e7f33f74fb 755 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 535 553 1.6E-35 T 09-03-2017 IPR001270 ClpA/B family GO:0005524 BV404_RS05715 3d675ca3156d93c6f50d10e7f33f74fb 755 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 493 511 1.6E-35 T 09-03-2017 IPR001270 ClpA/B family GO:0005524 BV404_RS05715 3d675ca3156d93c6f50d10e7f33f74fb 755 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 564 582 1.6E-35 T 09-03-2017 IPR001270 ClpA/B family GO:0005524 BV404_RS05715 3d675ca3156d93c6f50d10e7f33f74fb 755 Pfam PF07724 AAA domain (Cdc48 subfamily) 488 648 7.5E-47 T 09-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 BV404_RS05715 3d675ca3156d93c6f50d10e7f33f74fb 755 SUPERFAMILY SSF81923 1 142 1.26E-59 T 09-03-2017 IPR004176 Clp, N-terminal GO:0019538 BV404_RS05715 3d675ca3156d93c6f50d10e7f33f74fb 755 Gene3D G3DSA:3.40.50.300 444 664 4.4E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS05715 3d675ca3156d93c6f50d10e7f33f74fb 755 SUPERFAMILY SSF52540 170 426 1.11E-65 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS05715 3d675ca3156d93c6f50d10e7f33f74fb 755 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 4.9E-13 T 09-03-2017 IPR004176 Clp, N-terminal GO:0019538 BV404_RS05715 3d675ca3156d93c6f50d10e7f33f74fb 755 SMART SM00382 489 656 4.9E-7 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS05715 3d675ca3156d93c6f50d10e7f33f74fb 755 SMART SM00382 208 353 3.6E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS05715 3d675ca3156d93c6f50d10e7f33f74fb 755 SMART SM01086 655 744 2.4E-37 T 09-03-2017 IPR019489 Clp ATPase, C-terminal BV404_RS05715 3d675ca3156d93c6f50d10e7f33f74fb 755 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 213 326 4.0E-12 T 09-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 BV404_RS05715 3d675ca3156d93c6f50d10e7f33f74fb 755 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 736 0.0 T 09-03-2017 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 BV404_RS05715 3d675ca3156d93c6f50d10e7f33f74fb 755 Gene3D G3DSA:3.40.50.300 170 351 3.9E-41 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS05715 3d675ca3156d93c6f50d10e7f33f74fb 755 Gene3D G3DSA:1.10.8.60 665 750 4.1E-31 T 09-03-2017 BV404_RS05715 3d675ca3156d93c6f50d10e7f33f74fb 755 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 655 735 1.4E-24 T 09-03-2017 IPR019489 Clp ATPase, C-terminal BV404_RS05715 3d675ca3156d93c6f50d10e7f33f74fb 755 Gene3D G3DSA:1.10.8.60 354 438 1.2E-31 T 09-03-2017 BV404_RS05715 3d675ca3156d93c6f50d10e7f33f74fb 755 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 520 538 - T 09-03-2017 IPR028299 ClpA/B, conserved site 2 BV404_RS05715 3d675ca3156d93c6f50d10e7f33f74fb 755 Gene3D G3DSA:1.10.1780.10 1 142 2.1E-44 T 09-03-2017 IPR004176 Clp, N-terminal GO:0019538 BV404_RS09310 39e75d9a0934af5e899449301f4d6360 144 SUPERFAMILY SSF54637 6 137 6.32E-32 T 09-03-2017 IPR029069 HotDog domain BV404_RS09310 39e75d9a0934af5e899449301f4d6360 144 Pfam PF13279 Thioesterase-like superfamily 16 136 8.2E-20 T 09-03-2017 BV404_RS09310 39e75d9a0934af5e899449301f4d6360 144 Gene3D G3DSA:3.10.129.10 5 139 3.9E-41 T 09-03-2017 IPR029069 HotDog domain BV404_RS11010 f7fb890bcc3e6d328c4854a707caef30 156 SUPERFAMILY SSF54631 1 133 2.65E-34 T 09-03-2017 BV404_RS11010 f7fb890bcc3e6d328c4854a707caef30 156 Pfam PF00571 CBS domain 4 58 5.1E-14 T 09-03-2017 IPR000644 CBS domain BV404_RS11010 f7fb890bcc3e6d328c4854a707caef30 156 Pfam PF00571 CBS domain 79 128 5.0E-10 T 09-03-2017 IPR000644 CBS domain BV404_RS11010 f7fb890bcc3e6d328c4854a707caef30 156 SMART SM00116 11 59 1.0E-8 T 09-03-2017 IPR000644 CBS domain BV404_RS11010 f7fb890bcc3e6d328c4854a707caef30 156 SMART SM00116 84 131 1.6E-7 T 09-03-2017 IPR000644 CBS domain BV404_RS11010 f7fb890bcc3e6d328c4854a707caef30 156 Gene3D G3DSA:3.20.20.70 3 132 1.3E-32 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS09020 4f24ea2e509ada33a841c9374c61f48c 1153 Gene3D G3DSA:3.40.50.300 587 785 2.4E-58 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09020 4f24ea2e509ada33a841c9374c61f48c 1153 SMART SM00982 1008 1108 8.8E-48 T 09-03-2017 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 BV404_RS09020 4f24ea2e509ada33a841c9374c61f48c 1153 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 148 1082 0.0 T 09-03-2017 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 BV404_RS09020 4f24ea2e509ada33a841c9374c61f48c 1153 Gene3D G3DSA:3.30.2060.10 132 208 5.7E-15 T 09-03-2017 BV404_RS09020 4f24ea2e509ada33a841c9374c61f48c 1153 SUPERFAMILY SSF52540 351 466 2.87E-30 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09020 4f24ea2e509ada33a841c9374c61f48c 1153 Pfam PF03461 TRCF domain 1010 1100 2.0E-28 T 09-03-2017 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 BV404_RS09020 4f24ea2e509ada33a841c9374c61f48c 1153 SUPERFAMILY SSF143517 995 1146 2.48E-44 T 09-03-2017 BV404_RS09020 4f24ea2e509ada33a841c9374c61f48c 1153 SUPERFAMILY SSF52540 523 783 6.57E-64 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09020 4f24ea2e509ada33a841c9374c61f48c 1153 SUPERFAMILY SSF52540 14 345 4.3E-101 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09020 4f24ea2e509ada33a841c9374c61f48c 1153 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 28 1107 28.947 T 09-03-2017 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 BV404_RS09020 4f24ea2e509ada33a841c9374c61f48c 1153 Pfam PF02559 CarD-like/TRCF domain 480 575 2.4E-25 T 09-03-2017 IPR003711 CarD-like/TRCF domain BV404_RS09020 4f24ea2e509ada33a841c9374c61f48c 1153 SMART SM01058 479 576 1.2E-51 T 09-03-2017 IPR003711 CarD-like/TRCF domain BV404_RS09020 4f24ea2e509ada33a841c9374c61f48c 1153 Gene3D G3DSA:3.40.50.300 786 963 8.9E-36 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09020 4f24ea2e509ada33a841c9374c61f48c 1153 Pfam PF00270 DEAD/DEAH box helicase 605 765 6.9E-21 T 09-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BV404_RS09020 4f24ea2e509ada33a841c9374c61f48c 1153 SUPERFAMILY SSF52540 782 990 3.78E-48 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09020 4f24ea2e509ada33a841c9374c61f48c 1153 SMART SM00490 826 910 1.5E-18 T 09-03-2017 IPR001650 Helicase, C-terminal BV404_RS09020 4f24ea2e509ada33a841c9374c61f48c 1153 SUPERFAMILY SSF141259 470 548 3.01E-25 T 09-03-2017 IPR003711 CarD-like/TRCF domain BV404_RS09020 4f24ea2e509ada33a841c9374c61f48c 1153 Pfam PF00271 Helicase conserved C-terminal domain 807 909 1.5E-16 T 09-03-2017 IPR001650 Helicase, C-terminal BV404_RS09020 4f24ea2e509ada33a841c9374c61f48c 1153 SMART SM00487 600 789 9.0E-34 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain BV404_RS04450 bc2692b69f600dc904e3b30bfba342d1 331 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 7 311 1.4E-116 T 09-03-2017 BV404_RS04450 bc2692b69f600dc904e3b30bfba342d1 331 Pfam PF13378 Enolase C-terminal domain-like 127 277 1.0E-12 T 09-03-2017 IPR029065 Enolase C-terminal domain-like BV404_RS04450 bc2692b69f600dc904e3b30bfba342d1 331 Gene3D G3DSA:3.20.20.120 124 303 9.6E-45 T 09-03-2017 IPR029065 Enolase C-terminal domain-like BV404_RS04450 bc2692b69f600dc904e3b30bfba342d1 331 SMART SM00922 116 211 2.7E-6 T 09-03-2017 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal BV404_RS04450 bc2692b69f600dc904e3b30bfba342d1 331 SUPERFAMILY SSF51604 106 321 3.93E-47 T 09-03-2017 IPR029065 Enolase C-terminal domain-like BV404_RS04450 bc2692b69f600dc904e3b30bfba342d1 331 SUPERFAMILY SSF54826 1 99 1.49E-25 T 09-03-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BV404_RS04450 bc2692b69f600dc904e3b30bfba342d1 331 Gene3D G3DSA:3.30.390.10 1 123 2.2E-31 T 09-03-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BV404_RS04450 bc2692b69f600dc904e3b30bfba342d1 331 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 320 22.756 T 09-03-2017 IPR010196 o-succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BV404_RS03900 99ce12ab9538c75d855abcd1a84c21e0 295 PIRSF PIRSF003092 7 287 2.5E-85 T 09-03-2017 IPR025501 ATP binding protein MinD BV404_RS03900 99ce12ab9538c75d855abcd1a84c21e0 295 SUPERFAMILY SSF52540 22 282 5.78E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS03900 99ce12ab9538c75d855abcd1a84c21e0 295 Gene3D G3DSA:3.40.50.300 21 261 4.8E-57 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS03900 99ce12ab9538c75d855abcd1a84c21e0 295 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 25 211 9.6E-25 T 09-03-2017 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain BV404_RS05225 b4136f0fdcb6b08f526ca943b7cc2ac9 484 Pfam PF02321 Outer membrane efflux protein 77 267 1.5E-15 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 BV404_RS05225 b4136f0fdcb6b08f526ca943b7cc2ac9 484 Pfam PF02321 Outer membrane efflux protein 300 475 1.2E-22 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 BV404_RS05225 b4136f0fdcb6b08f526ca943b7cc2ac9 484 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 23 478 8.8E-153 T 09-03-2017 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 BV404_RS05225 b4136f0fdcb6b08f526ca943b7cc2ac9 484 Gene3D G3DSA:2.20.200.10 328 363 1.2E-24 T 09-03-2017 BV404_RS05225 b4136f0fdcb6b08f526ca943b7cc2ac9 484 Gene3D G3DSA:2.20.200.10 115 154 1.2E-24 T 09-03-2017 BV404_RS05225 b4136f0fdcb6b08f526ca943b7cc2ac9 484 SUPERFAMILY SSF56954 64 480 3.66E-88 T 09-03-2017 BV404_RS05225 b4136f0fdcb6b08f526ca943b7cc2ac9 484 SUPERFAMILY SSF56954 17 32 3.66E-88 T 09-03-2017 BV404_RS05225 b4136f0fdcb6b08f526ca943b7cc2ac9 484 Gene3D G3DSA:1.20.1600.10 365 479 1.5E-82 T 09-03-2017 BV404_RS05225 b4136f0fdcb6b08f526ca943b7cc2ac9 484 Gene3D G3DSA:1.20.1600.10 63 103 1.5E-82 T 09-03-2017 BV404_RS05225 b4136f0fdcb6b08f526ca943b7cc2ac9 484 Gene3D G3DSA:1.20.1600.10 155 327 1.5E-82 T 09-03-2017 BV404_RS05035 05d21d80bd3ade4e1618f9251b5e5966 454 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 437 1.5E-163 T 09-03-2017 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 BV404_RS05035 05d21d80bd3ade4e1618f9251b5e5966 454 PIRSF PIRSF006446 2 451 5.1E-214 T 09-03-2017 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 BV404_RS11295 aba062364bcf04c49b2ddb4049553853 151 Pfam PF07811 TadE-like protein 11 53 2.4E-10 T 09-03-2017 IPR012495 TadE-like BV404_RS14710 7f7c385d13dfb94bf25ee2025096042f 275 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 12 241 1.8E-32 T 09-03-2017 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 BV404_RS14710 7f7c385d13dfb94bf25ee2025096042f 275 Gene3D G3DSA:3.30.1240.10 91 186 8.3E-25 T 09-03-2017 BV404_RS14710 7f7c385d13dfb94bf25ee2025096042f 275 Gene3D G3DSA:3.40.50.1000 3 80 8.9E-55 T 09-03-2017 IPR023214 HAD-like domain BV404_RS14710 7f7c385d13dfb94bf25ee2025096042f 275 Gene3D G3DSA:3.40.50.1000 187 274 8.9E-55 T 09-03-2017 IPR023214 HAD-like domain BV404_RS14710 7f7c385d13dfb94bf25ee2025096042f 275 SUPERFAMILY SSF56784 7 274 3.39E-68 T 09-03-2017 IPR023214 HAD-like domain BV404_RS14710 7f7c385d13dfb94bf25ee2025096042f 275 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 12 270 5.3E-60 T 09-03-2017 IPR000150 Cof protein GO:0016787 BV404_RS14710 7f7c385d13dfb94bf25ee2025096042f 275 ProSitePatterns PS01228 Hypothetical cof family signature 1. 12 23 - T 09-03-2017 IPR000150 Cof protein GO:0016787 BV404_RS14710 7f7c385d13dfb94bf25ee2025096042f 275 Pfam PF08282 haloacid dehalogenase-like hydrolase 13 270 2.4E-64 T 09-03-2017 IPR023214 HAD-like domain BV404_RS14710 7f7c385d13dfb94bf25ee2025096042f 275 ProSitePatterns PS01229 Hypothetical cof family signature 2. 222 244 - T 09-03-2017 BV404_RS07355 5ba6e9b5782558908755d5dd7efd2243 666 Gene3D G3DSA:3.30.750.44 162 252 1.6E-5 T 09-03-2017 BV404_RS07355 5ba6e9b5782558908755d5dd7efd2243 666 SMART SM00228 247 324 1.0E-7 T 09-03-2017 IPR001478 PDZ domain GO:0005515 BV404_RS07355 5ba6e9b5782558908755d5dd7efd2243 666 SMART SM00245 327 528 7.5E-67 T 09-03-2017 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 BV404_RS07355 5ba6e9b5782558908755d5dd7efd2243 666 SUPERFAMILY SSF50156 238 324 1.11E-10 T 09-03-2017 IPR001478 PDZ domain GO:0005515 BV404_RS07355 5ba6e9b5782558908755d5dd7efd2243 666 SUPERFAMILY SSF52096 351 532 1.01E-71 T 09-03-2017 IPR029045 ClpP/crotonase-like domain BV404_RS07355 5ba6e9b5782558908755d5dd7efd2243 666 SUPERFAMILY SSF52096 167 265 1.01E-71 T 09-03-2017 IPR029045 ClpP/crotonase-like domain BV404_RS07355 5ba6e9b5782558908755d5dd7efd2243 666 Pfam PF08180 B melanoma antigen family 9 37 1.5E-9 T 09-03-2017 IPR012530 B melanoma antigen BV404_RS07355 5ba6e9b5782558908755d5dd7efd2243 666 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 531 664 2.3E-39 T 09-03-2017 IPR020992 Tail specific protease, C-terminal BV404_RS07355 5ba6e9b5782558908755d5dd7efd2243 666 Gene3D G3DSA:3.90.226.10 337 530 2.1E-64 T 09-03-2017 IPR029045 ClpP/crotonase-like domain BV404_RS07355 5ba6e9b5782558908755d5dd7efd2243 666 Gene3D G3DSA:3.90.226.10 642 664 2.1E-64 T 09-03-2017 IPR029045 ClpP/crotonase-like domain BV404_RS07355 5ba6e9b5782558908755d5dd7efd2243 666 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 240 321 5.6E-13 T 09-03-2017 IPR001478 PDZ domain GO:0005515 BV404_RS07355 5ba6e9b5782558908755d5dd7efd2243 666 Pfam PF03572 Peptidase family S41 357 526 6.4E-52 T 09-03-2017 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 BV404_RS07355 5ba6e9b5782558908755d5dd7efd2243 666 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 196 548 7.9E-114 T 09-03-2017 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 BV404_RS07355 5ba6e9b5782558908755d5dd7efd2243 666 Gene3D G3DSA:2.30.42.10 253 336 9.3E-20 T 09-03-2017 IPR001478 PDZ domain GO:0005515 BV404_RS10225 2cf1f9ee070f5533ade11eabc51b21ee 336 TIGRFAM TIGR00825 EIIBC-GUT: PTS system, glucitol/sorbitol-specific, IIBC component 4 336 3.2E-149 T 09-03-2017 IPR004702 Phosphotransferease, sorbitol phosphotransferase enzyme II GO:0008982|GO:0009401|GO:0016021 BV404_RS10225 2cf1f9ee070f5533ade11eabc51b21ee 336 Pfam PF07663 Sorbitol phosphotransferase enzyme II C-terminus 243 335 9.5E-44 T 09-03-2017 IPR011638 Sorbitol phosphotransferase enzyme II, C-terminal GO:0008982|GO:0009401|GO:0016021 BV404_RS10225 2cf1f9ee070f5533ade11eabc51b21ee 336 Pfam PF03612 Sorbitol phosphotransferase enzyme II N-terminus 5 188 9.0E-60 T 09-03-2017 IPR011618 Sorbitol phosphotransferase enzyme II, N-terminal GO:0008982|GO:0009401|GO:0016021 BV404_RS07995 18b4415271fd000a2179fdc621c95e3e 459 PRINTS PR00173 Glutamate-aspartate symporter signature 259 278 2.6E-30 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BV404_RS07995 18b4415271fd000a2179fdc621c95e3e 459 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 2.6E-30 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BV404_RS07995 18b4415271fd000a2179fdc621c95e3e 459 PRINTS PR00173 Glutamate-aspartate symporter signature 369 388 2.6E-30 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BV404_RS07995 18b4415271fd000a2179fdc621c95e3e 459 PRINTS PR00173 Glutamate-aspartate symporter signature 396 416 2.6E-30 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BV404_RS07995 18b4415271fd000a2179fdc621c95e3e 459 PRINTS PR00173 Glutamate-aspartate symporter signature 181 203 2.6E-30 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BV404_RS07995 18b4415271fd000a2179fdc621c95e3e 459 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 2.6E-30 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BV404_RS07995 18b4415271fd000a2179fdc621c95e3e 459 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 2.6E-30 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BV404_RS07995 18b4415271fd000a2179fdc621c95e3e 459 Pfam PF00375 Sodium:dicarboxylate symporter family 32 441 4.6E-98 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BV404_RS07995 18b4415271fd000a2179fdc621c95e3e 459 Gene3D G3DSA:1.10.3860.10 23 446 1.3E-94 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BV404_RS07995 18b4415271fd000a2179fdc621c95e3e 459 SUPERFAMILY SSF118215 29 441 3.27E-91 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BV404_RS05175 8c6894f74a7b586620c60512e2a45838 478 Pfam PF00232 Glycosyl hydrolase family 1 3 475 9.9E-132 T 09-03-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BV404_RS05175 8c6894f74a7b586620c60512e2a45838 478 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 10 24 - T 09-03-2017 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site BV404_RS05175 8c6894f74a7b586620c60512e2a45838 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 372 380 2.3E-15 T 09-03-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BV404_RS05175 8c6894f74a7b586620c60512e2a45838 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 440 452 2.3E-15 T 09-03-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BV404_RS05175 8c6894f74a7b586620c60512e2a45838 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 415 432 2.3E-15 T 09-03-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BV404_RS05175 8c6894f74a7b586620c60512e2a45838 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 306 320 2.3E-15 T 09-03-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BV404_RS05175 8c6894f74a7b586620c60512e2a45838 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 393 404 2.3E-15 T 09-03-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BV404_RS05175 8c6894f74a7b586620c60512e2a45838 478 SUPERFAMILY SSF51445 3 471 3.04E-160 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily BV404_RS05175 8c6894f74a7b586620c60512e2a45838 478 Gene3D G3DSA:3.20.20.80 5 476 6.3E-149 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 BV404_RS05175 8c6894f74a7b586620c60512e2a45838 478 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 372 380 - T 09-03-2017 IPR018120 Glycoside hydrolase family 1, active site BV404_RS12295 c53d8847ebc69c3b8f102bae2a12f436 272 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 5 99 2.4E-25 T 09-03-2017 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal BV404_RS12295 c53d8847ebc69c3b8f102bae2a12f436 272 SUPERFAMILY SSF48179 163 270 3.4E-30 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 BV404_RS12295 c53d8847ebc69c3b8f102bae2a12f436 272 Gene3D G3DSA:3.40.50.720 2 160 1.0E-49 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS12295 c53d8847ebc69c3b8f102bae2a12f436 272 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 224 246 - T 09-03-2017 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 BV404_RS12295 c53d8847ebc69c3b8f102bae2a12f436 272 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 268 1.4E-73 T 09-03-2017 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 BV404_RS12295 c53d8847ebc69c3b8f102bae2a12f436 272 Gene3D G3DSA:1.10.3730.10 162 268 7.8E-30 T 09-03-2017 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BV404_RS12295 c53d8847ebc69c3b8f102bae2a12f436 272 SUPERFAMILY SSF51735 4 160 3.3E-40 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS12295 c53d8847ebc69c3b8f102bae2a12f436 272 PIRSF PIRSF000193 3 270 9.3E-79 T 09-03-2017 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 BV404_RS12295 c53d8847ebc69c3b8f102bae2a12f436 272 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 268 7.0E-30 T 09-03-2017 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BV404_RS12295 c53d8847ebc69c3b8f102bae2a12f436 272 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 268 26.153 T 09-03-2017 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 BV404_RS10535 f07382e16b8aeac5167f865e4b6df5e7 452 Gene3D G3DSA:3.30.1850.10 1 113 5.3E-56 T 09-03-2017 IPR027820 Domain of unknown function DUF4478 BV404_RS10535 f07382e16b8aeac5167f865e4b6df5e7 452 Pfam PF11892 Domain of unknown function (DUF3412) 330 451 1.2E-57 T 09-03-2017 IPR021826 Protein of unknown function DUF3412 BV404_RS10535 f07382e16b8aeac5167f865e4b6df5e7 452 Gene3D G3DSA:3.40.50.450 122 450 7.9E-126 T 09-03-2017 BV404_RS10535 f07382e16b8aeac5167f865e4b6df5e7 452 Pfam PF03641 Possible lysine decarboxylase 187 326 3.6E-36 T 09-03-2017 IPR031100 LOG family BV404_RS10535 f07382e16b8aeac5167f865e4b6df5e7 452 Pfam PF14793 Domain of unknown function (DUF4478) 3 109 1.1E-49 T 09-03-2017 IPR027820 Domain of unknown function DUF4478 BV404_RS10535 f07382e16b8aeac5167f865e4b6df5e7 452 SUPERFAMILY SSF102405 119 327 2.59E-43 T 09-03-2017 BV404_RS00155 16cbe106c340798105485e00ed4bfa43 609 Gene3D G3DSA:3.30.70.870 308 403 2.9E-39 T 09-03-2017 BV404_RS00155 16cbe106c340798105485e00ed4bfa43 609 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 9 603 2.2E-293 T 09-03-2017 IPR006298 GTP-binding protein TypA GO:0005525 BV404_RS00155 16cbe106c340798105485e00ed4bfa43 609 SUPERFAMILY SSF50447 155 303 6.86E-34 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain BV404_RS00155 16cbe106c340798105485e00ed4bfa43 609 PRINTS PR00315 GTP-binding elongation factor signature 75 85 3.3E-13 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BV404_RS00155 16cbe106c340798105485e00ed4bfa43 609 PRINTS PR00315 GTP-binding elongation factor signature 11 24 3.3E-13 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BV404_RS00155 16cbe106c340798105485e00ed4bfa43 609 PRINTS PR00315 GTP-binding elongation factor signature 55 63 3.3E-13 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BV404_RS00155 16cbe106c340798105485e00ed4bfa43 609 PRINTS PR00315 GTP-binding elongation factor signature 127 136 3.3E-13 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BV404_RS00155 16cbe106c340798105485e00ed4bfa43 609 Gene3D G3DSA:2.40.30.10 210 307 2.5E-27 T 09-03-2017 BV404_RS00155 16cbe106c340798105485e00ed4bfa43 609 Pfam PF03144 Elongation factor Tu domain 2 223 293 1.1E-9 T 09-03-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 BV404_RS00155 16cbe106c340798105485e00ed4bfa43 609 Gene3D G3DSA:2.40.50.250 487 581 2.7E-40 T 09-03-2017 BV404_RS00155 16cbe106c340798105485e00ed4bfa43 609 Gene3D G3DSA:3.30.70.240 404 482 1.1E-31 T 09-03-2017 IPR000640 Translation elongation factor EFG, V domain BV404_RS00155 16cbe106c340798105485e00ed4bfa43 609 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 154 1.5E-23 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 BV404_RS00155 16cbe106c340798105485e00ed4bfa43 609 SUPERFAMILY SSF54980 306 391 5.4E-16 T 09-03-2017 IPR009022 Elongation factor G, III-V domain BV404_RS00155 16cbe106c340798105485e00ed4bfa43 609 Pfam PF00009 Elongation factor Tu GTP binding domain 8 198 1.9E-57 T 09-03-2017 BV404_RS00155 16cbe106c340798105485e00ed4bfa43 609 Gene3D G3DSA:3.40.50.300 6 209 6.9E-68 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS00155 16cbe106c340798105485e00ed4bfa43 609 SUPERFAMILY SSF54980 402 516 1.77E-27 T 09-03-2017 IPR009022 Elongation factor G, III-V domain BV404_RS00155 16cbe106c340798105485e00ed4bfa43 609 Pfam PF00679 Elongation factor G C-terminus 399 480 1.8E-21 T 09-03-2017 IPR000640 Translation elongation factor EFG, V domain BV404_RS00155 16cbe106c340798105485e00ed4bfa43 609 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 09-03-2017 IPR031157 Tr-type G domain, conserved site BV404_RS00155 16cbe106c340798105485e00ed4bfa43 609 SUPERFAMILY SSF52540 5 211 2.91E-60 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS10310 3f40bc1e0c0769c9ff475a39bbc68a4c 446 ProSitePatterns PS00942 glpT family of transporters signature. 151 167 - T 09-03-2017 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-3229133|Reactome: R-HSA-70153 BV404_RS10310 3f40bc1e0c0769c9ff475a39bbc68a4c 446 Pfam PF07690 Major Facilitator Superfamily 36 396 7.9E-51 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BV404_RS10310 3f40bc1e0c0769c9ff475a39bbc68a4c 446 Gene3D G3DSA:1.20.1250.20 23 221 1.6E-54 T 09-03-2017 BV404_RS10310 3f40bc1e0c0769c9ff475a39bbc68a4c 446 Gene3D G3DSA:1.20.1250.20 243 439 1.7E-39 T 09-03-2017 BV404_RS10310 3f40bc1e0c0769c9ff475a39bbc68a4c 446 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 413 6.5E-141 T 09-03-2017 BV404_RS10310 3f40bc1e0c0769c9ff475a39bbc68a4c 446 PIRSF PIRSF002808 7 443 4.2E-143 T 09-03-2017 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 BV404_RS10310 3f40bc1e0c0769c9ff475a39bbc68a4c 446 SUPERFAMILY SSF103473 14 431 3.01E-80 T 09-03-2017 IPR020846 Major facilitator superfamily domain BV404_RS02510 8a909e6fd09b9e80f5e8176aae569228 357 SUPERFAMILY SSF51569 8 345 9.16E-137 T 09-03-2017 BV404_RS02510 8a909e6fd09b9e80f5e8176aae569228 357 PIRSF PIRSF001361 1 354 6.6E-162 T 09-03-2017 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 BV404_RS02510 8a909e6fd09b9e80f5e8176aae569228 357 Pfam PF00793 DAHP synthetase I family 42 340 2.0E-103 T 09-03-2017 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 BV404_RS02510 8a909e6fd09b9e80f5e8176aae569228 357 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 8 347 3.2E-161 T 09-03-2017 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 BV404_RS02510 8a909e6fd09b9e80f5e8176aae569228 357 Gene3D G3DSA:3.20.20.70 11 347 1.5E-152 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS02750 a87fb0ab3e459e06801158932a114f0f 451 SUPERFAMILY SSF161070 7 450 6.67E-118 T 09-03-2017 BV404_RS02750 a87fb0ab3e459e06801158932a114f0f 451 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 15 36 2.9E-10 T 09-03-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BV404_RS02750 a87fb0ab3e459e06801158932a114f0f 451 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 311 330 2.9E-10 T 09-03-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BV404_RS02750 a87fb0ab3e459e06801158932a114f0f 451 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 44 63 2.9E-10 T 09-03-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BV404_RS02750 a87fb0ab3e459e06801158932a114f0f 451 Pfam PF00209 Sodium:neurotransmitter symporter family 7 127 2.7E-20 T 09-03-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BV404_RS02750 a87fb0ab3e459e06801158932a114f0f 451 Pfam PF00209 Sodium:neurotransmitter symporter family 151 449 1.2E-25 T 09-03-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BV404_RS01445 1721c9e4e4095cc9b1676caf451979eb 411 Pfam PF00589 Phage integrase family 221 386 2.6E-19 T 09-03-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BV404_RS01445 1721c9e4e4095cc9b1676caf451979eb 411 SUPERFAMILY SSF56349 126 393 3.77E-41 T 09-03-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BV404_RS01445 1721c9e4e4095cc9b1676caf451979eb 411 Pfam PF13356 Domain of unknown function (DUF4102) 7 105 5.0E-12 T 09-03-2017 IPR025166 Domain of unknown function DUF4102 BV404_RS01445 1721c9e4e4095cc9b1676caf451979eb 411 Gene3D G3DSA:1.10.443.10 221 393 3.7E-31 T 09-03-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 BV404_RS14440 141ecfc8d566564eb8ad2052afcbe6d4 763 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 208 327 2.8E-14 T 09-03-2017 IPR000014 PAS domain BV404_RS14440 141ecfc8d566564eb8ad2052afcbe6d4 763 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 86 205 1.4E-6 T 09-03-2017 IPR000014 PAS domain BV404_RS14440 141ecfc8d566564eb8ad2052afcbe6d4 763 Gene3D G3DSA:3.30.70.270 334 496 1.0E-43 T 09-03-2017 BV404_RS14440 141ecfc8d566564eb8ad2052afcbe6d4 763 SUPERFAMILY SSF141868 511 758 2.48E-68 T 09-03-2017 IPR001633 EAL domain BV404_RS14440 141ecfc8d566564eb8ad2052afcbe6d4 763 Gene3D G3DSA:3.20.20.450 513 757 5.3E-69 T 09-03-2017 IPR001633 EAL domain BV404_RS14440 141ecfc8d566564eb8ad2052afcbe6d4 763 Pfam PF00990 Diguanylate cyclase, GGDEF domain 332 489 2.4E-35 T 09-03-2017 IPR000160 GGDEF domain BV404_RS14440 141ecfc8d566564eb8ad2052afcbe6d4 763 Gene3D G3DSA:3.30.450.20 81 196 8.5E-8 T 09-03-2017 BV404_RS14440 141ecfc8d566564eb8ad2052afcbe6d4 763 Gene3D G3DSA:3.30.450.20 202 319 2.5E-17 T 09-03-2017 BV404_RS14440 141ecfc8d566564eb8ad2052afcbe6d4 763 SMART SM00091 210 277 2.5E-4 T 09-03-2017 IPR000014 PAS domain BV404_RS14440 141ecfc8d566564eb8ad2052afcbe6d4 763 SMART SM00091 85 152 0.011 T 09-03-2017 IPR000014 PAS domain BV404_RS14440 141ecfc8d566564eb8ad2052afcbe6d4 763 SUPERFAMILY SSF55785 195 319 1.82E-18 T 09-03-2017 IPR000014 PAS domain BV404_RS14440 141ecfc8d566564eb8ad2052afcbe6d4 763 Pfam PF13426 PAS domain 221 320 3.7E-9 T 09-03-2017 IPR000014 PAS domain BV404_RS14440 141ecfc8d566564eb8ad2052afcbe6d4 763 Pfam PF13426 PAS domain 100 196 0.21 T 09-03-2017 IPR000014 PAS domain BV404_RS14440 141ecfc8d566564eb8ad2052afcbe6d4 763 SMART SM00052 505 752 6.6E-62 T 09-03-2017 IPR001633 EAL domain BV404_RS14440 141ecfc8d566564eb8ad2052afcbe6d4 763 SUPERFAMILY SSF55785 72 196 2.44E-8 T 09-03-2017 IPR000014 PAS domain BV404_RS14440 141ecfc8d566564eb8ad2052afcbe6d4 763 SUPERFAMILY SSF55073 337 494 1.65E-39 T 09-03-2017 IPR029787 Nucleotide cyclase BV404_RS14440 141ecfc8d566564eb8ad2052afcbe6d4 763 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 329 492 5.4E-33 T 09-03-2017 IPR000160 GGDEF domain BV404_RS14440 141ecfc8d566564eb8ad2052afcbe6d4 763 SMART SM00267 321 493 1.8E-44 T 09-03-2017 IPR000160 GGDEF domain BV404_RS14440 141ecfc8d566564eb8ad2052afcbe6d4 763 Pfam PF00563 EAL domain 513 747 1.7E-57 T 09-03-2017 IPR001633 EAL domain BV404_RS11670 c6db5325b4660bd96689973c86dcd898 439 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 8 438 33.303 T 09-03-2017 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BV404_RS11670 c6db5325b4660bd96689973c86dcd898 439 Gene3D G3DSA:3.40.1190.10 97 301 2.1E-62 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 BV404_RS11670 c6db5325b4660bd96689973c86dcd898 439 Gene3D G3DSA:3.90.190.20 303 434 1.5E-40 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BV404_RS11670 c6db5325b4660bd96689973c86dcd898 439 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 9 436 1.5E-137 T 09-03-2017 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BV404_RS11670 c6db5325b4660bd96689973c86dcd898 439 SUPERFAMILY SSF53623 98 299 1.44E-52 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 BV404_RS11670 c6db5325b4660bd96689973c86dcd898 439 Pfam PF02875 Mur ligase family, glutamate ligase domain 304 354 1.2E-5 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BV404_RS11670 c6db5325b4660bd96689973c86dcd898 439 Gene3D G3DSA:3.40.50.720 8 96 1.8E-20 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS11670 c6db5325b4660bd96689973c86dcd898 439 SUPERFAMILY SSF51984 8 97 1.16E-18 T 09-03-2017 BV404_RS11670 c6db5325b4660bd96689973c86dcd898 439 Pfam PF08245 Mur ligase middle domain 113 281 8.9E-30 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 BV404_RS11670 c6db5325b4660bd96689973c86dcd898 439 SUPERFAMILY SSF53244 301 437 5.95E-43 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BV404_RS09265 4278c05828002a7aba87fed31bcb8c3a 455 SUPERFAMILY SSF143548 16 154 1.05E-43 T 09-03-2017 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 BV404_RS09265 4278c05828002a7aba87fed31bcb8c3a 455 Gene3D G3DSA:3.30.1330.90 10 154 5.9E-49 T 09-03-2017 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 BV404_RS09265 4278c05828002a7aba87fed31bcb8c3a 455 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 447 5.9E-196 T 09-03-2017 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 BV404_RS09265 4278c05828002a7aba87fed31bcb8c3a 455 Pfam PF03313 Serine dehydratase alpha chain 183 446 3.9E-94 T 09-03-2017 IPR005130 Serine dehydratase-like, alpha subunit BV404_RS09265 4278c05828002a7aba87fed31bcb8c3a 455 Pfam PF03315 Serine dehydratase beta chain 3 152 2.0E-51 T 09-03-2017 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 BV404_RS06045 67619753f4e12be24c553d6f44e85753 484 Gene3D G3DSA:3.30.870.10 320 460 1.2E-34 T 09-03-2017 BV404_RS06045 67619753f4e12be24c553d6f44e85753 484 SMART SM00155 397 424 1.5E-5 T 09-03-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BV404_RS06045 67619753f4e12be24c553d6f44e85753 484 SMART SM00155 219 246 2.3E-5 T 09-03-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BV404_RS06045 67619753f4e12be24c553d6f44e85753 484 Pfam PF13091 PLD-like domain 134 267 2.1E-15 T 09-03-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 BV404_RS06045 67619753f4e12be24c553d6f44e85753 484 Pfam PF13091 PLD-like domain 327 444 2.0E-24 T 09-03-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 BV404_RS06045 67619753f4e12be24c553d6f44e85753 484 SUPERFAMILY SSF56024 273 471 1.03E-45 T 09-03-2017 BV404_RS06045 67619753f4e12be24c553d6f44e85753 484 SUPERFAMILY SSF56024 85 313 1.33E-50 T 09-03-2017 BV404_RS06045 67619753f4e12be24c553d6f44e85753 484 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 484 49.677 T 09-03-2017 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 BV404_RS06045 67619753f4e12be24c553d6f44e85753 484 Gene3D G3DSA:3.30.870.10 112 317 4.0E-38 T 09-03-2017 BV404_RS06045 67619753f4e12be24c553d6f44e85753 484 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 9 484 3.6E-155 T 09-03-2017 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 BV404_RS06045 67619753f4e12be24c553d6f44e85753 484 Pfam PF13396 Phospholipase_D-nuclease N-terminal 24 59 3.8E-7 T 09-03-2017 IPR027379 Cardiolipin synthase N-terminal BV404_RS13265 ecf4734f1a6abd6df2dde885360e485f 393 Pfam PF12832 MFS_1 like family 13 361 4.8E-46 T 09-03-2017 IPR024989 Major facilitator superfamily associated domain BV404_RS13265 ecf4734f1a6abd6df2dde885360e485f 393 Gene3D G3DSA:1.20.1250.20 195 389 6.6E-23 T 09-03-2017 BV404_RS13265 ecf4734f1a6abd6df2dde885360e485f 393 Gene3D G3DSA:1.20.1250.20 13 190 2.0E-15 T 09-03-2017 BV404_RS13265 ecf4734f1a6abd6df2dde885360e485f 393 PIRSF PIRSF004925 2 389 1.6E-105 T 09-03-2017 IPR026032 Probable 3-phenylpropionic acid transporter BV404_RS13265 ecf4734f1a6abd6df2dde885360e485f 393 SUPERFAMILY SSF103473 7 373 1.15E-38 T 09-03-2017 IPR020846 Major facilitator superfamily domain BV404_RS10055 27b4a317eb4f96741ce789e2e97731a0 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 5.2E-49 T 09-03-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 BV404_RS10055 27b4a317eb4f96741ce789e2e97731a0 169 SUPERFAMILY SSF51261 18 166 5.41E-55 T 09-03-2017 IPR011055 Duplicated hybrid motif BV404_RS10055 27b4a317eb4f96741ce789e2e97731a0 169 Gene3D G3DSA:2.70.70.10 17 166 2.3E-59 T 09-03-2017 BV404_RS10055 27b4a317eb4f96741ce789e2e97731a0 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 4.4E-50 T 09-03-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 BV404_RS10055 27b4a317eb4f96741ce789e2e97731a0 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 09-03-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 BV404_RS06780 b996e9fca375909ce7cdc9dc34cc265c 480 ProSitePatterns PS00893 Nudix box signature. 61 82 - T 09-03-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 BV404_RS06780 b996e9fca375909ce7cdc9dc34cc265c 480 SUPERFAMILY SSF48317 178 363 6.1E-9 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BV404_RS06780 b996e9fca375909ce7cdc9dc34cc265c 480 SUPERFAMILY SSF55811 29 149 9.88E-20 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 BV404_RS06780 b996e9fca375909ce7cdc9dc34cc265c 480 Gene3D G3DSA:3.90.79.10 34 99 6.0E-17 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 BV404_RS06780 b996e9fca375909ce7cdc9dc34cc265c 480 Pfam PF01569 PAP2 superfamily 245 358 3.4E-8 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BV404_RS06780 b996e9fca375909ce7cdc9dc34cc265c 480 Pfam PF00293 NUDIX domain 33 145 1.6E-12 T 09-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 BV404_RS06780 b996e9fca375909ce7cdc9dc34cc265c 480 Gene3D G3DSA:1.20.144.10 161 357 1.9E-10 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BV404_RS10320 cddda6de6f70b7d13fef02b7d261b59b 140 SMART SM00422 6 74 3.3E-19 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BV404_RS10320 cddda6de6f70b7d13fef02b7d261b59b 140 Pfam PF00376 MerR family regulatory protein 7 43 8.1E-12 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BV404_RS10320 cddda6de6f70b7d13fef02b7d261b59b 140 Gene3D G3DSA:1.10.1660.10 3 58 2.9E-19 T 09-03-2017 BV404_RS10320 cddda6de6f70b7d13fef02b7d261b59b 140 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 18 31 4.7E-9 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BV404_RS10320 cddda6de6f70b7d13fef02b7d261b59b 140 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 41 61 4.7E-9 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BV404_RS10320 cddda6de6f70b7d13fef02b7d261b59b 140 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 7 18 4.7E-9 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BV404_RS10320 cddda6de6f70b7d13fef02b7d261b59b 140 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 6 133 1.9E-54 T 09-03-2017 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 BV404_RS10320 cddda6de6f70b7d13fef02b7d261b59b 140 Gene3D G3DSA:1.10.1660.10 59 129 6.6E-14 T 09-03-2017 BV404_RS10320 cddda6de6f70b7d13fef02b7d261b59b 140 Pfam PF09278 MerR, DNA binding 48 113 2.5E-15 T 09-03-2017 IPR015358 Transcription regulator MerR, DNA binding BV404_RS10320 cddda6de6f70b7d13fef02b7d261b59b 140 SUPERFAMILY SSF46955 5 116 7.33E-25 T 09-03-2017 IPR009061 Putative DNA-binding domain BV404_RS10320 cddda6de6f70b7d13fef02b7d261b59b 140 ProSitePatterns PS00552 MerR-type HTH domain signature. 9 31 - T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BV404_RS11970 d0bcfecf1cd96acdbecf1483306f9fba 348 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 11 264 9.1E-55 T 09-03-2017 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 BV404_RS11970 d0bcfecf1cd96acdbecf1483306f9fba 348 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 6 342 27.372 T 09-03-2017 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 BV404_RS11970 d0bcfecf1cd96acdbecf1483306f9fba 348 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 9 171 1.5E-40 T 09-03-2017 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 BV404_RS11970 d0bcfecf1cd96acdbecf1483306f9fba 348 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 186 337 8.2E-20 T 09-03-2017 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 BV404_RS11970 d0bcfecf1cd96acdbecf1483306f9fba 348 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 78 91 - T 09-03-2017 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 BV404_RS11970 d0bcfecf1cd96acdbecf1483306f9fba 348 SUPERFAMILY SSF55120 6 338 2.45E-91 T 09-03-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 BV404_RS07310 5e9a147f7b6a5faf9a88acf4428dc4fc 707 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 305 311 - T 09-03-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BV404_RS07310 5e9a147f7b6a5faf9a88acf4428dc4fc 707 Pfam PF02926 THUMP domain 31 153 3.4E-13 T 09-03-2017 IPR004114 THUMP domain GO:0003723 BV404_RS07310 5e9a147f7b6a5faf9a88acf4428dc4fc 707 SUPERFAMILY SSF53335 258 371 1.95E-41 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS07310 5e9a147f7b6a5faf9a88acf4428dc4fc 707 SUPERFAMILY SSF53335 139 217 1.95E-41 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS07310 5e9a147f7b6a5faf9a88acf4428dc4fc 707 SMART SM00981 56 154 1.7E-20 T 09-03-2017 IPR004114 THUMP domain GO:0003723 BV404_RS07310 5e9a147f7b6a5faf9a88acf4428dc4fc 707 Gene3D G3DSA:3.40.50.150 149 214 9.6E-28 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS07310 5e9a147f7b6a5faf9a88acf4428dc4fc 707 Gene3D G3DSA:3.40.50.150 255 335 9.6E-28 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS07310 5e9a147f7b6a5faf9a88acf4428dc4fc 707 PIRSF PIRSF037618 1 707 8.8E-297 T 09-03-2017 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 BV404_RS07310 5e9a147f7b6a5faf9a88acf4428dc4fc 707 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 443 663 1.1E-25 T 09-03-2017 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 BV404_RS07310 5e9a147f7b6a5faf9a88acf4428dc4fc 707 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 706 31.577 T 09-03-2017 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 BV404_RS07310 5e9a147f7b6a5faf9a88acf4428dc4fc 707 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 09-03-2017 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 BV404_RS07310 5e9a147f7b6a5faf9a88acf4428dc4fc 707 SUPERFAMILY SSF53335 399 705 2.41E-68 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS07310 5e9a147f7b6a5faf9a88acf4428dc4fc 707 Gene3D G3DSA:3.40.50.150 436 706 4.1E-75 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS07310 5e9a147f7b6a5faf9a88acf4428dc4fc 707 Pfam PF01170 Putative RNA methylase family UPF0020 162 374 3.2E-64 T 09-03-2017 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 BV404_RS11760 4475bffd9c49e2f4810a49ae57e03338 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.694 T 09-03-2017 IPR023035 Ribosomal protein S9, bacterial/plastid BV404_RS11760 4475bffd9c49e2f4810a49ae57e03338 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 2.0E-47 T 09-03-2017 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 BV404_RS11760 4475bffd9c49e2f4810a49ae57e03338 130 SUPERFAMILY SSF54211 5 130 1.9E-48 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold BV404_RS11760 4475bffd9c49e2f4810a49ae57e03338 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 09-03-2017 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 BV404_RS11760 4475bffd9c49e2f4810a49ae57e03338 130 Gene3D G3DSA:3.30.230.10 4 130 1.1E-51 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BV404_RS03890 2560ab875fa0559eaad20b25957ebf46 697 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 09-03-2017 IPR025505 FHIPEP conserved site BV404_RS03890 2560ab875fa0559eaad20b25957ebf46 697 PIRSF PIRSF005419 10 697 5.7E-252 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BV404_RS03890 2560ab875fa0559eaad20b25957ebf46 697 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 694 2.3E-266 T 09-03-2017 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 BV404_RS03890 2560ab875fa0559eaad20b25957ebf46 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 2.9E-56 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BV404_RS03890 2560ab875fa0559eaad20b25957ebf46 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 2.9E-56 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BV404_RS03890 2560ab875fa0559eaad20b25957ebf46 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 2.9E-56 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BV404_RS03890 2560ab875fa0559eaad20b25957ebf46 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 2.9E-56 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BV404_RS03890 2560ab875fa0559eaad20b25957ebf46 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 2.9E-56 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BV404_RS03890 2560ab875fa0559eaad20b25957ebf46 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 2.9E-56 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BV404_RS03890 2560ab875fa0559eaad20b25957ebf46 697 Pfam PF00771 FHIPEP family 32 687 2.2E-268 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BV404_RS10815 bfd6cb40a85394b35a9b88bafe40e484 296 Gene3D G3DSA:1.10.10.10 7 88 1.2E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS10815 bfd6cb40a85394b35a9b88bafe40e484 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 2.9E-18 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS10815 bfd6cb40a85394b35a9b88bafe40e484 296 Pfam PF03466 LysR substrate binding domain 90 292 1.8E-26 T 09-03-2017 IPR005119 LysR, substrate-binding BV404_RS10815 bfd6cb40a85394b35a9b88bafe40e484 296 SUPERFAMILY SSF53850 92 292 1.76E-29 T 09-03-2017 BV404_RS10815 bfd6cb40a85394b35a9b88bafe40e484 296 Gene3D G3DSA:3.40.190.10 94 193 4.8E-29 T 09-03-2017 BV404_RS10815 bfd6cb40a85394b35a9b88bafe40e484 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 7.1E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS10815 bfd6cb40a85394b35a9b88bafe40e484 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 7.1E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS10815 bfd6cb40a85394b35a9b88bafe40e484 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 7.1E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS10815 bfd6cb40a85394b35a9b88bafe40e484 296 SUPERFAMILY SSF46785 6 113 1.17E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS06660 c4d23b0ab139c275ee7410df04770aea 98 SUPERFAMILY SSF54909 3 82 2.35E-25 T 09-03-2017 IPR011008 Dimeric alpha-beta barrel BV404_RS06660 c4d23b0ab139c275ee7410df04770aea 98 Gene3D G3DSA:3.30.70.900 1 82 7.9E-29 T 09-03-2017 BV404_RS06660 c4d23b0ab139c275ee7410df04770aea 98 Pfam PF03992 Antibiotic biosynthesis monooxygenase 4 78 1.8E-19 T 09-03-2017 IPR007138 Antibiotic biosynthesis monooxygenase domain BV404_RS14525 f37c41a7828201c3b6222a1517e3ec08 279 SUPERFAMILY SSF51215 6 162 7.32E-31 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 BV404_RS14525 f37c41a7828201c3b6222a1517e3ec08 279 Gene3D G3DSA:2.60.120.280 7 166 4.8E-37 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 BV404_RS14525 f37c41a7828201c3b6222a1517e3ec08 279 SUPERFAMILY SSF46689 175 225 6.09E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS14525 f37c41a7828201c3b6222a1517e3ec08 279 Pfam PF12833 Helix-turn-helix domain 198 276 4.0E-18 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BV404_RS14525 f37c41a7828201c3b6222a1517e3ec08 279 Pfam PF02311 AraC-like ligand binding domain 37 155 6.1E-19 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 BV404_RS14525 f37c41a7828201c3b6222a1517e3ec08 279 Gene3D G3DSA:1.10.10.60 230 277 5.0E-15 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS14525 f37c41a7828201c3b6222a1517e3ec08 279 SUPERFAMILY SSF46689 229 278 1.3E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS14525 f37c41a7828201c3b6222a1517e3ec08 279 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 244 259 5.1E-5 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BV404_RS14525 f37c41a7828201c3b6222a1517e3ec08 279 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 259 275 5.1E-5 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BV404_RS14525 f37c41a7828201c3b6222a1517e3ec08 279 Gene3D G3DSA:1.10.10.60 173 229 8.0E-15 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS14525 f37c41a7828201c3b6222a1517e3ec08 279 SMART SM00342 192 275 6.9E-30 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BV404_RS06735 2d007d481672a0abfcc621f091579562 298 Gene3D G3DSA:3.20.20.60 5 291 1.1E-96 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 BV404_RS06735 2d007d481672a0abfcc621f091579562 298 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 6 295 1.6E-126 T 09-03-2017 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 BV404_RS06735 2d007d481672a0abfcc621f091579562 298 Pfam PF13714 Phosphoenolpyruvate phosphomutase 14 258 6.8E-46 T 09-03-2017 BV404_RS06735 2d007d481672a0abfcc621f091579562 298 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 3 296 49.934 T 09-03-2017 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 BV404_RS06735 2d007d481672a0abfcc621f091579562 298 ProSitePatterns PS00161 Isocitrate lyase signature. 119 124 - T 09-03-2017 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 BV404_RS06735 2d007d481672a0abfcc621f091579562 298 SUPERFAMILY SSF51621 5 294 1.66E-96 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 BV404_RS11950 3bd6957e3c427ad7871ae6a6e4773032 328 Pfam PF04542 Sigma-70 region 2 89 158 6.4E-20 T 09-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS11950 3bd6957e3c427ad7871ae6a6e4773032 328 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 282 308 - T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS11950 3bd6957e3c427ad7871ae6a6e4773032 328 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 85 312 6.0E-37 T 09-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS11950 3bd6957e3c427ad7871ae6a6e4773032 328 SUPERFAMILY SSF88659 162 235 2.01E-15 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS11950 3bd6957e3c427ad7871ae6a6e4773032 328 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 113 126 - T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS11950 3bd6957e3c427ad7871ae6a6e4773032 328 SUPERFAMILY SSF88659 219 318 4.36E-24 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS11950 3bd6957e3c427ad7871ae6a6e4773032 328 SUPERFAMILY SSF88946 50 159 4.58E-46 T 09-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS11950 3bd6957e3c427ad7871ae6a6e4773032 328 Gene3D G3DSA:1.10.10.10 252 317 9.8E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS11950 3bd6957e3c427ad7871ae6a6e4773032 328 Pfam PF04545 Sigma-70, region 4 257 310 6.8E-18 T 09-03-2017 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS11950 3bd6957e3c427ad7871ae6a6e4773032 328 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 44 323 6.7E-139 T 09-03-2017 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS11950 3bd6957e3c427ad7871ae6a6e4773032 328 Pfam PF04539 Sigma-70 region 3 169 242 5.2E-22 T 09-03-2017 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS11950 3bd6957e3c427ad7871ae6a6e4773032 328 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 3 323 39.657 T 09-03-2017 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS11950 3bd6957e3c427ad7871ae6a6e4773032 328 Pfam PF00140 Sigma-70 factor, region 1.2 51 84 2.6E-13 T 09-03-2017 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS11950 3bd6957e3c427ad7871ae6a6e4773032 328 Gene3D G3DSA:1.10.10.10 162 211 9.2E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS11950 3bd6957e3c427ad7871ae6a6e4773032 328 PRINTS PR00046 Major sigma-70 factor signature 282 297 1.4E-27 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS11950 3bd6957e3c427ad7871ae6a6e4773032 328 PRINTS PR00046 Major sigma-70 factor signature 261 273 1.4E-27 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS11950 3bd6957e3c427ad7871ae6a6e4773032 328 PRINTS PR00046 Major sigma-70 factor signature 297 308 1.4E-27 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS11950 3bd6957e3c427ad7871ae6a6e4773032 328 PRINTS PR00046 Major sigma-70 factor signature 137 145 1.4E-27 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS11950 3bd6957e3c427ad7871ae6a6e4773032 328 PRINTS PR00046 Major sigma-70 factor signature 113 126 1.4E-27 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS11950 3bd6957e3c427ad7871ae6a6e4773032 328 Gene3D G3DSA:1.10.601.10 12 158 1.8E-59 T 09-03-2017 BV404_RS03100 ab45b52bfe2cb33e39601c50cfa55d5e 475 Gene3D G3DSA:3.90.800.10 68 183 5.2E-36 T 09-03-2017 BV404_RS03100 ab45b52bfe2cb33e39601c50cfa55d5e 475 Gene3D G3DSA:3.40.50.620 2 67 1.6E-53 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS03100 ab45b52bfe2cb33e39601c50cfa55d5e 475 Gene3D G3DSA:3.40.50.620 184 233 1.6E-53 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS03100 ab45b52bfe2cb33e39601c50cfa55d5e 475 SUPERFAMILY SSF52374 3 301 9.92E-109 T 09-03-2017 BV404_RS03100 ab45b52bfe2cb33e39601c50cfa55d5e 475 Gene3D G3DSA:1.10.1160.10 236 316 3.1E-36 T 09-03-2017 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 BV404_RS03100 ab45b52bfe2cb33e39601c50cfa55d5e 475 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 308 2.5E-115 T 09-03-2017 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 BV404_RS03100 ab45b52bfe2cb33e39601c50cfa55d5e 475 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 3 464 33.735 T 09-03-2017 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 BV404_RS03100 ab45b52bfe2cb33e39601c50cfa55d5e 475 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 09-03-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BV404_RS03100 ab45b52bfe2cb33e39601c50cfa55d5e 475 Gene3D G3DSA:1.10.10.350 366 464 5.0E-31 T 09-03-2017 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 BV404_RS03100 ab45b52bfe2cb33e39601c50cfa55d5e 475 SUPERFAMILY SSF48163 302 464 7.06E-47 T 09-03-2017 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 BV404_RS03100 ab45b52bfe2cb33e39601c50cfa55d5e 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 198 206 9.8E-28 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 BV404_RS03100 ab45b52bfe2cb33e39601c50cfa55d5e 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 192 9.8E-28 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 BV404_RS03100 ab45b52bfe2cb33e39601c50cfa55d5e 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 9.8E-28 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 BV404_RS03100 ab45b52bfe2cb33e39601c50cfa55d5e 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 9.8E-28 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 BV404_RS03100 ab45b52bfe2cb33e39601c50cfa55d5e 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 9.8E-28 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 BV404_RS03100 ab45b52bfe2cb33e39601c50cfa55d5e 475 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 465 3.5E-193 T 09-03-2017 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 BV404_RS00385 12a37568f38a05f961c424a89bb45ba1 567 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 471 491 - T 09-03-2017 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 BV404_RS00385 12a37568f38a05f961c424a89bb45ba1 567 Pfam PF00474 Sodium:solute symporter family 368 489 6.8E-20 T 09-03-2017 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 BV404_RS00385 12a37568f38a05f961c424a89bb45ba1 567 Pfam PF00474 Sodium:solute symporter family 33 296 1.6E-33 T 09-03-2017 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 BV404_RS00385 12a37568f38a05f961c424a89bb45ba1 567 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 8 558 5.1E-262 T 09-03-2017 IPR019899 Sodium/solute symporter, VC2705 subfamily BV404_RS02810 a9acd77b9c6e8e36a65c5a29312e967d 154 Pfam PF00156 Phosphoribosyl transferase domain 28 142 3.0E-16 T 09-03-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 BV404_RS02810 a9acd77b9c6e8e36a65c5a29312e967d 154 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 153 39.604 T 09-03-2017 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22 BV404_RS02810 a9acd77b9c6e8e36a65c5a29312e967d 154 SUPERFAMILY SSF53271 5 147 2.27E-30 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like BV404_RS02810 a9acd77b9c6e8e36a65c5a29312e967d 154 Gene3D G3DSA:3.40.50.2020 1 147 1.9E-42 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like BV404_RS08205 3861de0e0937f02bf5e2bdaaf2f5f8ae 153 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 108 153 2.0E-10 T 09-03-2017 BV404_RS08205 3861de0e0937f02bf5e2bdaaf2f5f8ae 153 Pfam PF04191 Phospholipid methyltransferase 42 141 1.1E-14 T 09-03-2017 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 BV404_RS05790 485ef756a7bed18fa121390c5cfc6c32 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.0E-6 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BV404_RS05790 485ef756a7bed18fa121390c5cfc6c32 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.0E-6 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BV404_RS05790 485ef756a7bed18fa121390c5cfc6c32 336 SUPERFAMILY SSF53822 60 332 8.44E-95 T 09-03-2017 IPR028082 Periplasmic binding protein-like I BV404_RS05790 485ef756a7bed18fa121390c5cfc6c32 336 SMART SM00354 1 71 4.2E-38 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BV404_RS05790 485ef756a7bed18fa121390c5cfc6c32 336 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 334 64.494 T 09-03-2017 IPR023588 Transcription regulator HTH, PurR GO:0006355 BV404_RS05790 485ef756a7bed18fa121390c5cfc6c32 336 Gene3D G3DSA:3.40.50.2300 54 173 3.2E-45 T 09-03-2017 BV404_RS05790 485ef756a7bed18fa121390c5cfc6c32 336 SUPERFAMILY SSF47413 1 59 1.2E-17 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 BV404_RS05790 485ef756a7bed18fa121390c5cfc6c32 336 Pfam PF13377 Periplasmic binding protein-like domain 170 330 4.8E-44 T 09-03-2017 BV404_RS05790 485ef756a7bed18fa121390c5cfc6c32 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 09-03-2017 BV404_RS05790 485ef756a7bed18fa121390c5cfc6c32 336 Gene3D G3DSA:1.10.260.40 2 53 1.3E-25 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 BV404_RS05790 485ef756a7bed18fa121390c5cfc6c32 336 Gene3D G3DSA:3.40.50.2300 174 311 4.4E-55 T 09-03-2017 BV404_RS05790 485ef756a7bed18fa121390c5cfc6c32 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 9.5E-21 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BV404_RS13795 293482ec49b397c8846cdbef45777f82 312 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 18 69 2.2E-8 T 09-03-2017 IPR025966 Oligopeptide transport permease C-like, N-terminal domain BV404_RS13795 293482ec49b397c8846cdbef45777f82 312 SUPERFAMILY SSF161098 93 295 2.88E-25 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS13795 293482ec49b397c8846cdbef45777f82 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 309 1.2E-29 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS13795 293482ec49b397c8846cdbef45777f82 312 Gene3D G3DSA:1.10.3720.10 91 307 5.8E-28 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS11420 58088f9ec350aa600d441842cf969e59 520 Gene3D G3DSA:3.40.50.300 250 493 8.1E-42 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11420 58088f9ec350aa600d441842cf969e59 520 SUPERFAMILY SSF52540 8 230 4.66E-56 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11420 58088f9ec350aa600d441842cf969e59 520 Pfam PF00005 ABC transporter 27 172 2.8E-27 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS11420 58088f9ec350aa600d441842cf969e59 520 Pfam PF00005 ABC transporter 277 436 1.3E-20 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS11420 58088f9ec350aa600d441842cf969e59 520 SMART SM00382 33 221 6.0E-10 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS11420 58088f9ec350aa600d441842cf969e59 520 SMART SM00382 286 485 2.6 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS11420 58088f9ec350aa600d441842cf969e59 520 Gene3D G3DSA:3.40.50.300 7 236 5.0E-61 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11420 58088f9ec350aa600d441842cf969e59 520 SUPERFAMILY SSF52540 249 489 4.76E-42 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11420 58088f9ec350aa600d441842cf969e59 520 ProSitePatterns PS00211 ABC transporters family signature. 409 423 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS11660 4c5fd70aef06029a494d914542cdd96c 358 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 348 1.0E-118 T 09-03-2017 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BV404_RS11660 4c5fd70aef06029a494d914542cdd96c 358 Gene3D G3DSA:3.40.50.2000 253 334 7.7E-8 T 09-03-2017 BV404_RS11660 4c5fd70aef06029a494d914542cdd96c 358 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 7 352 34.849 T 09-03-2017 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BV404_RS11660 4c5fd70aef06029a494d914542cdd96c 358 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 8 144 3.3E-47 T 09-03-2017 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BV404_RS11660 4c5fd70aef06029a494d914542cdd96c 358 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 184 337 7.4E-38 T 09-03-2017 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 BV404_RS11660 4c5fd70aef06029a494d914542cdd96c 358 Gene3D G3DSA:3.40.50.2000 1 195 3.2E-74 T 09-03-2017 BV404_RS11660 4c5fd70aef06029a494d914542cdd96c 358 SUPERFAMILY SSF53756 5 352 3.88E-126 T 09-03-2017 BV404_RS08360 580f23bb3e4582953f3c65140f42be01 400 SUPERFAMILY SSF103473 5 391 3.79E-35 T 09-03-2017 IPR020846 Major facilitator superfamily domain BV404_RS08360 580f23bb3e4582953f3c65140f42be01 400 Pfam PF07690 Major Facilitator Superfamily 15 241 6.9E-9 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BV404_RS08360 580f23bb3e4582953f3c65140f42be01 400 Gene3D G3DSA:1.20.1250.20 12 190 4.1E-13 T 09-03-2017 BV404_RS08360 580f23bb3e4582953f3c65140f42be01 400 Gene3D G3DSA:1.20.1250.20 214 393 1.8E-11 T 09-03-2017 BV404_RS07485 00801d315b559f0fb0f73088331d282d 489 Pfam PF13435 Cytochrome c554 and c-prime 109 169 2.2E-4 T 09-03-2017 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 BV404_RS07485 00801d315b559f0fb0f73088331d282d 489 Gene3D G3DSA:1.20.850.10 229 436 3.7E-60 T 09-03-2017 BV404_RS07485 00801d315b559f0fb0f73088331d282d 489 Pfam PF13447 Seven times multi-haem cytochrome CxxCH 197 371 4.8E-27 T 09-03-2017 BV404_RS07485 00801d315b559f0fb0f73088331d282d 489 SUPERFAMILY SSF48695 50 419 5.0E-65 T 09-03-2017 IPR011031 Multihaem cytochrome BV404_RS07485 00801d315b559f0fb0f73088331d282d 489 Gene3D G3DSA:1.10.780.10 41 208 1.6E-22 T 09-03-2017 BV404_RS12665 cb48e45c4865685707153426e851d1fc 940 Gene3D G3DSA:1.10.8.280 285 405 2.3E-45 T 09-03-2017 BV404_RS12665 cb48e45c4865685707153426e851d1fc 940 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 939 23.02 T 09-03-2017 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 BV404_RS12665 cb48e45c4865685707153426e851d1fc 940 Gene3D G3DSA:1.20.1580.10 406 476 2.0E-54 T 09-03-2017 BV404_RS12665 cb48e45c4865685707153426e851d1fc 940 Gene3D G3DSA:1.20.1580.10 91 129 2.0E-54 T 09-03-2017 BV404_RS12665 cb48e45c4865685707153426e851d1fc 940 Gene3D G3DSA:1.20.1580.10 250 283 2.0E-54 T 09-03-2017 BV404_RS12665 cb48e45c4865685707153426e851d1fc 940 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 924 0.0 T 09-03-2017 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 BV404_RS12665 cb48e45c4865685707153426e851d1fc 940 SUPERFAMILY SSF52540 429 568 3.22E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS12665 cb48e45c4865685707153426e851d1fc 940 SUPERFAMILY SSF52540 4 204 3.22E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS12665 cb48e45c4865685707153426e851d1fc 940 Gene3D G3DSA:1.20.1580.10 693 819 1.1E-54 T 09-03-2017 BV404_RS12665 cb48e45c4865685707153426e851d1fc 940 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS12665 cb48e45c4865685707153426e851d1fc 940 ProSitePatterns PS00211 ABC transporters family signature. 829 843 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS12665 cb48e45c4865685707153426e851d1fc 940 SUPERFAMILY SSF52540 620 912 2.37E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS12665 cb48e45c4865685707153426e851d1fc 940 Pfam PF00005 ABC transporter 622 859 2.0E-10 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS12665 cb48e45c4865685707153426e851d1fc 940 Gene3D G3DSA:3.30.1490.20 130 153 1.7E-29 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 BV404_RS12665 cb48e45c4865685707153426e851d1fc 940 Gene3D G3DSA:3.30.1490.20 200 248 1.7E-29 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 BV404_RS12665 cb48e45c4865685707153426e851d1fc 940 Gene3D G3DSA:3.40.50.300 2 51 4.9E-57 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS12665 cb48e45c4865685707153426e851d1fc 940 Gene3D G3DSA:3.40.50.300 477 595 4.9E-57 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS12665 cb48e45c4865685707153426e851d1fc 940 Gene3D G3DSA:3.40.50.300 820 938 2.2E-61 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS12665 cb48e45c4865685707153426e851d1fc 940 Gene3D G3DSA:3.40.50.300 603 691 2.2E-61 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS04455 a90978241ecdc867cb35eb7c0fef0c30 463 Pfam PF00501 AMP-binding enzyme 5 360 4.4E-53 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 BV404_RS04455 a90978241ecdc867cb35eb7c0fef0c30 463 Gene3D G3DSA:3.30.300.30 359 455 2.5E-18 T 09-03-2017 BV404_RS04455 a90978241ecdc867cb35eb7c0fef0c30 463 Gene3D G3DSA:2.30.38.10 307 353 1.4E-4 T 09-03-2017 BV404_RS04455 a90978241ecdc867cb35eb7c0fef0c30 463 ProSitePatterns PS00455 Putative AMP-binding domain signature. 143 154 - T 09-03-2017 IPR020845 AMP-binding, conserved site BV404_RS04455 a90978241ecdc867cb35eb7c0fef0c30 463 Gene3D G3DSA:3.40.50.980 152 289 1.3E-28 T 09-03-2017 BV404_RS04455 a90978241ecdc867cb35eb7c0fef0c30 463 Pfam PF13193 AMP-binding enzyme C-terminal domain 369 427 2.8E-6 T 09-03-2017 IPR025110 AMP-binding enzyme C-terminal domain BV404_RS04455 a90978241ecdc867cb35eb7c0fef0c30 463 Gene3D G3DSA:3.40.50.980 5 151 8.3E-24 T 09-03-2017 BV404_RS04455 a90978241ecdc867cb35eb7c0fef0c30 463 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 25 448 1.4E-133 T 09-03-2017 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 BV404_RS04455 a90978241ecdc867cb35eb7c0fef0c30 463 SUPERFAMILY SSF56801 4 455 3.14E-89 T 09-03-2017 BV404_RS08795 66edf8de542422b74d9a6bada214fc51 135 Pfam PF03061 Thioesterase superfamily 18 103 1.3E-17 T 09-03-2017 IPR006683 Thioesterase domain Reactome: R-HSA-75105 BV404_RS08795 66edf8de542422b74d9a6bada214fc51 135 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 4 127 5.1E-51 T 09-03-2017 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 BV404_RS08795 66edf8de542422b74d9a6bada214fc51 135 SUPERFAMILY SSF54637 4 127 1.35E-40 T 09-03-2017 IPR029069 HotDog domain BV404_RS08795 66edf8de542422b74d9a6bada214fc51 135 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 9 123 7.5E-38 T 09-03-2017 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 BV404_RS08795 66edf8de542422b74d9a6bada214fc51 135 Gene3D G3DSA:3.10.129.10 2 126 9.5E-50 T 09-03-2017 IPR029069 HotDog domain BV404_RS08795 66edf8de542422b74d9a6bada214fc51 135 PIRSF PIRSF003230 1 134 1.2E-47 T 09-03-2017 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 BV404_RS02400 3508f14666c6161acc4eb7e3d0325fc0 748 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 351 362 - T 09-03-2017 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 BV404_RS02400 3508f14666c6161acc4eb7e3d0325fc0 748 SUPERFAMILY SSF47831 198 311 9.02E-28 T 09-03-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 BV404_RS02400 3508f14666c6161acc4eb7e3d0325fc0 748 SMART SM00065 17 163 5.0E-20 T 09-03-2017 IPR003018 GAF domain GO:0005515 BV404_RS02400 3508f14666c6161acc4eb7e3d0325fc0 748 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 171 723 4.0E-135 T 09-03-2017 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 BV404_RS02400 3508f14666c6161acc4eb7e3d0325fc0 748 SUPERFAMILY SSF55781 2 158 1.4E-31 T 09-03-2017 IPR029016 GAF domain-like BV404_RS02400 3508f14666c6161acc4eb7e3d0325fc0 748 SUPERFAMILY SSF51621 419 714 4.71E-95 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 BV404_RS02400 3508f14666c6161acc4eb7e3d0325fc0 748 Pfam PF00391 PEP-utilising enzyme, mobile domain 319 391 3.0E-16 T 09-03-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 BV404_RS02400 3508f14666c6161acc4eb7e3d0325fc0 748 Pfam PF01590 GAF domain 20 152 4.6E-13 T 09-03-2017 IPR003018 GAF domain GO:0005515 BV404_RS02400 3508f14666c6161acc4eb7e3d0325fc0 748 Gene3D G3DSA:3.30.450.40 1 159 2.4E-44 T 09-03-2017 IPR029016 GAF domain-like BV404_RS02400 3508f14666c6161acc4eb7e3d0325fc0 748 Gene3D G3DSA:3.20.20.60 421 734 5.1E-95 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 BV404_RS02400 3508f14666c6161acc4eb7e3d0325fc0 748 Pfam PF05524 PEP-utilising enzyme, N-terminal 173 294 4.3E-25 T 09-03-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 BV404_RS02400 3508f14666c6161acc4eb7e3d0325fc0 748 Gene3D G3DSA:1.10.274.10 196 301 4.7E-33 T 09-03-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 BV404_RS02400 3508f14666c6161acc4eb7e3d0325fc0 748 SUPERFAMILY SSF52009 293 412 1.1E-25 T 09-03-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 BV404_RS02400 3508f14666c6161acc4eb7e3d0325fc0 748 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 423 705 8.2E-93 T 09-03-2017 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 BV404_RS02400 3508f14666c6161acc4eb7e3d0325fc0 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 612 627 1.6E-22 T 09-03-2017 BV404_RS02400 3508f14666c6161acc4eb7e3d0325fc0 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 1.6E-22 T 09-03-2017 BV404_RS02400 3508f14666c6161acc4eb7e3d0325fc0 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 665 677 1.6E-22 T 09-03-2017 BV404_RS02400 3508f14666c6161acc4eb7e3d0325fc0 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 629 644 1.6E-22 T 09-03-2017 BV404_RS02400 3508f14666c6161acc4eb7e3d0325fc0 748 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 612 630 - T 09-03-2017 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 BV404_RS02400 3508f14666c6161acc4eb7e3d0325fc0 748 Gene3D G3DSA:3.50.30.10 302 418 1.8E-28 T 09-03-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 BV404_RS02980 7136fa3523cfc876c14d2d60b39d8ce2 103 Gene3D G3DSA:1.10.760.10 13 103 5.1E-28 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 BV404_RS02980 7136fa3523cfc876c14d2d60b39d8ce2 103 Pfam PF00034 Cytochrome c 26 103 1.4E-10 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 BV404_RS02980 7136fa3523cfc876c14d2d60b39d8ce2 103 PRINTS PR00605 Class IC cytochrome C signature 77 99 9.0E-5 T 09-03-2017 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 BV404_RS02980 7136fa3523cfc876c14d2d60b39d8ce2 103 PRINTS PR00605 Class IC cytochrome C signature 32 43 9.0E-5 T 09-03-2017 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 BV404_RS02980 7136fa3523cfc876c14d2d60b39d8ce2 103 SUPERFAMILY SSF46626 14 102 3.2E-23 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 BV404_RS00250 f5093abc6334a15d8cfc067f3bc41fbc 336 SUPERFAMILY SSF158544 215 283 5.49E-19 T 09-03-2017 BV404_RS00250 f5093abc6334a15d8cfc067f3bc41fbc 336 SUPERFAMILY SSF54523 36 100 5.02E-37 T 09-03-2017 BV404_RS00250 f5093abc6334a15d8cfc067f3bc41fbc 336 SUPERFAMILY SSF54523 285 325 5.02E-37 T 09-03-2017 BV404_RS00250 f5093abc6334a15d8cfc067f3bc41fbc 336 Gene3D G3DSA:1.10.40.60 99 214 3.4E-37 T 09-03-2017 BV404_RS00250 f5093abc6334a15d8cfc067f3bc41fbc 336 PIRSF PIRSF002786 1 328 7.2E-71 T 09-03-2017 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 BV404_RS00250 f5093abc6334a15d8cfc067f3bc41fbc 336 Gene3D G3DSA:1.10.40.60 216 285 4.5E-25 T 09-03-2017 BV404_RS00250 f5093abc6334a15d8cfc067f3bc41fbc 336 Pfam PF03934 Type II secretion system (T2SS), protein K 31 317 2.8E-90 T 09-03-2017 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 BV404_RS00250 f5093abc6334a15d8cfc067f3bc41fbc 336 SUPERFAMILY SSF158544 101 213 1.1E-31 T 09-03-2017 BV404_RS00250 f5093abc6334a15d8cfc067f3bc41fbc 336 Gene3D G3DSA:3.30.1300.30 26 98 3.6E-46 T 09-03-2017 BV404_RS00250 f5093abc6334a15d8cfc067f3bc41fbc 336 Gene3D G3DSA:3.30.1300.30 286 326 3.6E-46 T 09-03-2017 BV404_RS08400 14b41ad887752fc81449a31eb6b183a6 388 Gene3D G3DSA:3.40.50.1970 3 183 8.5E-52 T 09-03-2017 BV404_RS08400 14b41ad887752fc81449a31eb6b183a6 388 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 09-03-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 BV404_RS08400 14b41ad887752fc81449a31eb6b183a6 388 SUPERFAMILY SSF56796 6 385 2.49E-117 T 09-03-2017 BV404_RS08400 14b41ad887752fc81449a31eb6b183a6 388 Pfam PF00465 Iron-containing alcohol dehydrogenase 12 377 1.3E-112 T 09-03-2017 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 BV404_RS08400 14b41ad887752fc81449a31eb6b183a6 388 Gene3D G3DSA:1.20.1090.10 184 385 7.5E-66 T 09-03-2017 BV404_RS09405 78663da0ecb19e83a5ffdf83b06a59d3 87 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 84 7.0E-34 T 09-03-2017 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 BV404_RS09405 78663da0ecb19e83a5ffdf83b06a59d3 87 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 87 18.783 T 09-03-2017 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 BV404_RS09405 78663da0ecb19e83a5ffdf83b06a59d3 87 Gene3D G3DSA:3.30.1070.10 33 86 9.4E-22 T 09-03-2017 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 BV404_RS09405 78663da0ecb19e83a5ffdf83b06a59d3 87 SUPERFAMILY SSF55229 33 85 1.7E-16 T 09-03-2017 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 BV404_RS09405 78663da0ecb19e83a5ffdf83b06a59d3 87 Pfam PF03776 Septum formation topological specificity factor MinE 14 83 5.3E-23 T 09-03-2017 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 BV404_RS04835 00c812c5058bb7b7f3c614d49ae895b2 67 PRINTS PR00050 Cold shock protein signature 40 58 1.1E-17 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BV404_RS04835 00c812c5058bb7b7f3c614d49ae895b2 67 PRINTS PR00050 Cold shock protein signature 4 19 1.1E-17 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BV404_RS04835 00c812c5058bb7b7f3c614d49ae895b2 67 PRINTS PR00050 Cold shock protein signature 25 34 1.1E-17 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BV404_RS04835 00c812c5058bb7b7f3c614d49ae895b2 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 09-03-2017 IPR019844 Cold-shock conserved site BV404_RS04835 00c812c5058bb7b7f3c614d49ae895b2 67 PIRSF PIRSF002599 1 67 4.9E-25 T 09-03-2017 IPR012156 Cold shock, CspA GO:0003676 BV404_RS04835 00c812c5058bb7b7f3c614d49ae895b2 67 SMART SM00357 3 67 1.9E-31 T 09-03-2017 IPR011129 Cold shock protein GO:0003676 BV404_RS04835 00c812c5058bb7b7f3c614d49ae895b2 67 SUPERFAMILY SSF50249 1 66 1.65E-25 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS04835 00c812c5058bb7b7f3c614d49ae895b2 67 Gene3D G3DSA:2.40.50.140 1 66 1.7E-32 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS04835 00c812c5058bb7b7f3c614d49ae895b2 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 4.2E-31 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BV404_RS13840 8df55f22a1f9c3d561f282ce09948cb9 135 Gene3D G3DSA:1.10.760.10 56 133 1.8E-33 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 BV404_RS13840 8df55f22a1f9c3d561f282ce09948cb9 135 PRINTS PR00607 Class IE cytochrome C signature 121 132 1.1E-15 T 09-03-2017 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 BV404_RS13840 8df55f22a1f9c3d561f282ce09948cb9 135 PRINTS PR00607 Class IE cytochrome C signature 78 88 1.1E-15 T 09-03-2017 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 BV404_RS13840 8df55f22a1f9c3d561f282ce09948cb9 135 PRINTS PR00607 Class IE cytochrome C signature 106 118 1.1E-15 T 09-03-2017 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 BV404_RS13840 8df55f22a1f9c3d561f282ce09948cb9 135 PRINTS PR00607 Class IE cytochrome C signature 67 78 1.1E-15 T 09-03-2017 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 BV404_RS13840 8df55f22a1f9c3d561f282ce09948cb9 135 SUPERFAMILY SSF46626 58 132 1.43E-19 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 BV404_RS13840 8df55f22a1f9c3d561f282ce09948cb9 135 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 57 131 1.1E-15 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 BV404_RS00865 e7e216e9e60733f72ed0ad26b821b664 325 Pfam PF00561 alpha/beta hydrolase fold 61 301 2.8E-17 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 BV404_RS00865 e7e216e9e60733f72ed0ad26b821b664 325 SUPERFAMILY SSF53474 30 188 2.47E-39 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold BV404_RS00865 e7e216e9e60733f72ed0ad26b821b664 325 SUPERFAMILY SSF53474 221 299 2.47E-39 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold BV404_RS00865 e7e216e9e60733f72ed0ad26b821b664 325 PIRSF PIRSF005211 1 325 9.5E-105 T 09-03-2017 IPR012020 AB hydrolase 4 family BV404_RS00865 e7e216e9e60733f72ed0ad26b821b664 325 Gene3D G3DSA:3.40.50.1820 56 300 1.3E-26 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold BV404_RS10765 3344dd4fdb7375b3fd7abe01412c7584 119 Pfam PF04355 SmpA / OmlA family 35 104 5.5E-26 T 09-03-2017 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 BV404_RS10765 3344dd4fdb7375b3fd7abe01412c7584 119 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 7 110 33.484 T 09-03-2017 IPR026592 Outer membrane protein assembly factor BamE BV404_RS09820 51dacb4eac87b52b5204b909a4b93de9 213 Pfam PF00633 Helix-hairpin-helix motif 100 127 5.0E-8 T 09-03-2017 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 BV404_RS09820 51dacb4eac87b52b5204b909a4b93de9 213 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 09-03-2017 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 BV404_RS09820 51dacb4eac87b52b5204b909a4b93de9 213 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 09-03-2017 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 BV404_RS09820 51dacb4eac87b52b5204b909a4b93de9 213 SUPERFAMILY SSF48150 4 207 1.4E-71 T 09-03-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 BV404_RS09820 51dacb4eac87b52b5204b909a4b93de9 213 PIRSF PIRSF001435 1 210 8.5E-51 T 09-03-2017 IPR005759 Endonuclease III GO:0003906|GO:0006284 BV404_RS09820 51dacb4eac87b52b5204b909a4b93de9 213 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 7.7E-5 T 09-03-2017 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 BV404_RS09820 51dacb4eac87b52b5204b909a4b93de9 213 TIGRFAM TIGR01083 nth: endonuclease III 5 194 1.4E-88 T 09-03-2017 IPR005759 Endonuclease III GO:0003906|GO:0006284 BV404_RS09820 51dacb4eac87b52b5204b909a4b93de9 213 Gene3D G3DSA:1.10.1670.10 123 208 7.7E-35 T 09-03-2017 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 BV404_RS09820 51dacb4eac87b52b5204b909a4b93de9 213 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.298 T 09-03-2017 IPR005759 Endonuclease III GO:0003906|GO:0006284 BV404_RS09820 51dacb4eac87b52b5204b909a4b93de9 213 Gene3D G3DSA:1.10.340.30 23 122 1.8E-33 T 09-03-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 BV404_RS09820 51dacb4eac87b52b5204b909a4b93de9 213 SMART SM00525 186 206 1.8E-5 T 09-03-2017 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 BV404_RS09820 51dacb4eac87b52b5204b909a4b93de9 213 SMART SM00478 38 185 1.3E-50 T 09-03-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 BV404_RS09820 51dacb4eac87b52b5204b909a4b93de9 213 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 3.9E-18 T 09-03-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 BV404_RS11945 b4821e1e50cc8985a19177d881e44b24 853 Gene3D G3DSA:3.40.1170.10 4 120 1.1E-51 T 09-03-2017 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 BV404_RS11945 b4821e1e50cc8985a19177d881e44b24 853 SMART SM00534 606 793 5.6E-117 T 09-03-2017 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 BV404_RS11945 b4821e1e50cc8985a19177d881e44b24 853 Gene3D G3DSA:3.30.420.110 127 255 3.5E-41 T 09-03-2017 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 BV404_RS11945 b4821e1e50cc8985a19177d881e44b24 853 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 687 703 - T 09-03-2017 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 BV404_RS11945 b4821e1e50cc8985a19177d881e44b24 853 SUPERFAMILY SSF48334 267 564 2.49E-93 T 09-03-2017 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 BV404_RS11945 b4821e1e50cc8985a19177d881e44b24 853 PIRSF PIRSF037677 2 833 3.9E-157 T 09-03-2017 BV404_RS11945 b4821e1e50cc8985a19177d881e44b24 853 Pfam PF00488 MutS domain V 609 796 2.4E-86 T 09-03-2017 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 BV404_RS11945 b4821e1e50cc8985a19177d881e44b24 853 SUPERFAMILY SSF53150 114 266 2.22E-41 T 09-03-2017 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 BV404_RS11945 b4821e1e50cc8985a19177d881e44b24 853 Gene3D G3DSA:3.40.50.300 566 797 4.6E-83 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11945 b4821e1e50cc8985a19177d881e44b24 853 Pfam PF01624 MutS domain I 8 119 8.7E-42 T 09-03-2017 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 BV404_RS11945 b4821e1e50cc8985a19177d881e44b24 853 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 7 851 0.0 T 09-03-2017 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 BV404_RS11945 b4821e1e50cc8985a19177d881e44b24 853 SUPERFAMILY SSF55271 4 113 1.31E-42 T 09-03-2017 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 BV404_RS11945 b4821e1e50cc8985a19177d881e44b24 853 Pfam PF05188 MutS domain II 128 253 6.5E-32 T 09-03-2017 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 BV404_RS11945 b4821e1e50cc8985a19177d881e44b24 853 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 7 845 25.508 T 09-03-2017 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 BV404_RS11945 b4821e1e50cc8985a19177d881e44b24 853 SMART SM00533 283 590 7.8E-116 T 09-03-2017 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 BV404_RS11945 b4821e1e50cc8985a19177d881e44b24 853 Gene3D G3DSA:1.10.1420.10 264 467 2.3E-57 T 09-03-2017 BV404_RS11945 b4821e1e50cc8985a19177d881e44b24 853 Pfam PF05192 MutS domain III 269 558 2.5E-41 T 09-03-2017 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 BV404_RS11945 b4821e1e50cc8985a19177d881e44b24 853 SUPERFAMILY SSF52540 566 797 2.66E-61 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11945 b4821e1e50cc8985a19177d881e44b24 853 Pfam PF05190 MutS family domain IV 427 517 1.4E-30 T 09-03-2017 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 BV404_RS01970 26f91ba19988a7b8c7d269ea21a6b46b 631 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 09-03-2017 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 BV404_RS01970 26f91ba19988a7b8c7d269ea21a6b46b 631 SUPERFAMILY SSF47005 317 362 5.36E-13 T 09-03-2017 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 BV404_RS01970 26f91ba19988a7b8c7d269ea21a6b46b 631 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 184 631 1.6E-205 T 09-03-2017 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 BV404_RS01970 26f91ba19988a7b8c7d269ea21a6b46b 631 Gene3D G3DSA:4.10.320.10 318 364 3.7E-21 T 09-03-2017 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 BV404_RS01970 26f91ba19988a7b8c7d269ea21a6b46b 631 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 400 630 5.0E-79 T 09-03-2017 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 BV404_RS01970 26f91ba19988a7b8c7d269ea21a6b46b 631 SUPERFAMILY SSF51230 103 195 5.23E-23 T 09-03-2017 IPR011053 Single hybrid motif BV404_RS01970 26f91ba19988a7b8c7d269ea21a6b46b 631 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 126 155 - T 09-03-2017 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 BV404_RS01970 26f91ba19988a7b8c7d269ea21a6b46b 631 Pfam PF02817 e3 binding domain 324 358 3.2E-14 T 09-03-2017 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 BV404_RS01970 26f91ba19988a7b8c7d269ea21a6b46b 631 SUPERFAMILY SSF51230 1 91 1.7E-22 T 09-03-2017 IPR011053 Single hybrid motif BV404_RS01970 26f91ba19988a7b8c7d269ea21a6b46b 631 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 226 255 - T 09-03-2017 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 BV404_RS01970 26f91ba19988a7b8c7d269ea21a6b46b 631 Gene3D G3DSA:2.40.50.100 105 179 3.4E-21 T 09-03-2017 BV404_RS01970 26f91ba19988a7b8c7d269ea21a6b46b 631 Gene3D G3DSA:2.40.50.100 3 78 5.0E-21 T 09-03-2017 BV404_RS01970 26f91ba19988a7b8c7d269ea21a6b46b 631 Gene3D G3DSA:2.40.50.100 205 279 1.7E-20 T 09-03-2017 BV404_RS01970 26f91ba19988a7b8c7d269ea21a6b46b 631 Pfam PF00364 Biotin-requiring enzyme 4 73 1.3E-19 T 09-03-2017 IPR000089 Biotin/lipoyl attachment BV404_RS01970 26f91ba19988a7b8c7d269ea21a6b46b 631 Pfam PF00364 Biotin-requiring enzyme 104 174 2.6E-21 T 09-03-2017 IPR000089 Biotin/lipoyl attachment BV404_RS01970 26f91ba19988a7b8c7d269ea21a6b46b 631 Pfam PF00364 Biotin-requiring enzyme 204 274 6.7E-20 T 09-03-2017 IPR000089 Biotin/lipoyl attachment BV404_RS01970 26f91ba19988a7b8c7d269ea21a6b46b 631 Gene3D G3DSA:3.30.559.10 390 630 1.6E-81 T 09-03-2017 IPR023213 Chloramphenicol acetyltransferase-like domain Reactome: R-HSA-389661 BV404_RS01970 26f91ba19988a7b8c7d269ea21a6b46b 631 SUPERFAMILY SSF51230 204 295 9.16E-22 T 09-03-2017 IPR011053 Single hybrid motif BV404_RS01970 26f91ba19988a7b8c7d269ea21a6b46b 631 SUPERFAMILY SSF52777 389 630 1.02E-80 T 09-03-2017 BV404_RS11870 142d3ae2b43809fab9bc393aa2fa718f 92 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 17 87 1.5E-18 T 09-03-2017 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 BV404_RS11870 142d3ae2b43809fab9bc393aa2fa718f 92 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 12 89 4.3E-21 T 09-03-2017 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 BV404_RS11870 142d3ae2b43809fab9bc393aa2fa718f 92 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 92 33.678 T 09-03-2017 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 BV404_RS08290 5d6d3532cb0fe6e0d4a350bbb7a510e8 448 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 251 266 - T 09-03-2017 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 BV404_RS08290 5d6d3532cb0fe6e0d4a350bbb7a510e8 448 Gene3D G3DSA:3.30.590.10 116 435 3.8E-76 T 09-03-2017 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 BV404_RS08290 5d6d3532cb0fe6e0d4a350bbb7a510e8 448 SMART SM01230 113 370 1.0E-79 T 09-03-2017 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BV404_RS08290 5d6d3532cb0fe6e0d4a350bbb7a510e8 448 SUPERFAMILY SSF54368 11 109 6.28E-7 T 09-03-2017 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BV404_RS08290 5d6d3532cb0fe6e0d4a350bbb7a510e8 448 Gene3D G3DSA:3.10.20.70 10 109 9.4E-6 T 09-03-2017 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BV404_RS08290 5d6d3532cb0fe6e0d4a350bbb7a510e8 448 Pfam PF00120 Glutamine synthetase, catalytic domain 115 443 5.6E-85 T 09-03-2017 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BV404_RS08290 5d6d3532cb0fe6e0d4a350bbb7a510e8 448 SUPERFAMILY SSF55931 115 445 3.83E-86 T 09-03-2017 BV404_RS08665 9a594ed1ffab22b9d82d831cad666fae 197 Pfam PF04993 TfoX N-terminal domain 12 99 7.0E-22 T 09-03-2017 IPR007076 TfoX, N-terminal BV404_RS08665 9a594ed1ffab22b9d82d831cad666fae 197 Gene3D G3DSA:1.10.150.20 114 194 7.9E-27 T 09-03-2017 BV404_RS08665 9a594ed1ffab22b9d82d831cad666fae 197 Pfam PF04994 TfoX C-terminal domain 114 192 3.4E-26 T 09-03-2017 IPR007077 TfoX, C-terminal BV404_RS08665 9a594ed1ffab22b9d82d831cad666fae 197 SUPERFAMILY SSF159894 2 101 2.46E-25 T 09-03-2017 BV404_RS08665 9a594ed1ffab22b9d82d831cad666fae 197 PIRSF PIRSF028788 12 196 2.0E-34 T 09-03-2017 IPR026256 Transcriptional regulator, TfoX/Sxy-type BV404_RS08665 9a594ed1ffab22b9d82d831cad666fae 197 Gene3D G3DSA:3.30.1460.30 2 99 1.9E-26 T 09-03-2017 IPR007076 TfoX, N-terminal BV404_RS03245 afa405ced26a836b5e8f7825c35588f0 377 Gene3D G3DSA:1.20.1330.10 279 332 1.2E-60 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BV404_RS03245 afa405ced26a836b5e8f7825c35588f0 377 Gene3D G3DSA:1.20.1330.10 55 171 1.2E-60 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BV404_RS03245 afa405ced26a836b5e8f7825c35588f0 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 5.3E-25 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BV404_RS03245 afa405ced26a836b5e8f7825c35588f0 377 PRINTS PR00207 Flagellin signature 37 54 9.0E-28 T 09-03-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BV404_RS03245 afa405ced26a836b5e8f7825c35588f0 377 PRINTS PR00207 Flagellin signature 111 134 9.0E-28 T 09-03-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BV404_RS03245 afa405ced26a836b5e8f7825c35588f0 377 PRINTS PR00207 Flagellin signature 76 95 9.0E-28 T 09-03-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BV404_RS03245 afa405ced26a836b5e8f7825c35588f0 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 1.8E-42 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BV404_RS03245 afa405ced26a836b5e8f7825c35588f0 377 Pfam PF07196 Flagellin hook IN motif 196 249 4.1E-13 T 09-03-2017 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 BV404_RS03245 afa405ced26a836b5e8f7825c35588f0 377 SUPERFAMILY SSF64518 1 376 3.79E-96 T 09-03-2017 BV404_RS04910 142dd64937cc809a9634d204114872ad 181 SUPERFAMILY SSF49503 71 180 4.71E-21 T 09-03-2017 IPR008972 Cupredoxin BV404_RS04910 142dd64937cc809a9634d204114872ad 181 Gene3D G3DSA:2.60.40.420 60 180 3.7E-23 T 09-03-2017 IPR008972 Cupredoxin BV404_RS08920 78849faf611b2f57251f582dca715324 758 Gene3D G3DSA:3.20.70.20 3 757 0.0 T 09-03-2017 BV404_RS08920 78849faf611b2f57251f582dca715324 758 Pfam PF02901 Pyruvate formate lyase-like 20 612 8.1E-208 T 09-03-2017 IPR004184 Pyruvate formate lyase domain GO:0003824 BV404_RS08920 78849faf611b2f57251f582dca715324 758 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 8 758 0.0 T 09-03-2017 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 BV404_RS08920 78849faf611b2f57251f582dca715324 758 ProSitePatterns PS00850 Glycine radical domain signature. 728 736 - T 09-03-2017 IPR019777 Formate C-acetyltransferase glycine radical, conserved site BV404_RS08920 78849faf611b2f57251f582dca715324 758 PIRSF PIRSF000379 5 758 0.0 T 09-03-2017 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 BV404_RS08920 78849faf611b2f57251f582dca715324 758 Pfam PF01228 Glycine radical 628 739 3.5E-42 T 09-03-2017 IPR001150 Glycine radical domain GO:0003824|GO:0008152 BV404_RS08920 78849faf611b2f57251f582dca715324 758 SUPERFAMILY SSF51998 4 757 1.63E-290 T 09-03-2017 BV404_RS10780 b49d07092d6d95de9fdfba9e3b219b62 162 SUPERFAMILY SSF74982 9 139 6.54E-49 T 09-03-2017 IPR023620 Small protein B BV404_RS10780 b49d07092d6d95de9fdfba9e3b219b62 162 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 15 139 4.0E-57 T 09-03-2017 IPR000037 SsrA-binding protein GO:0003723 BV404_RS10780 b49d07092d6d95de9fdfba9e3b219b62 162 TIGRFAM TIGR00086 smpB: SsrA-binding protein 15 157 1.2E-53 T 09-03-2017 IPR000037 SsrA-binding protein GO:0003723 BV404_RS10780 b49d07092d6d95de9fdfba9e3b219b62 162 Gene3D G3DSA:2.40.280.10 14 134 1.3E-48 T 09-03-2017 IPR023620 Small protein B BV404_RS10780 b49d07092d6d95de9fdfba9e3b219b62 162 Pfam PF01668 SmpB protein 14 77 1.5E-28 T 09-03-2017 IPR000037 SsrA-binding protein GO:0003723 BV404_RS10780 b49d07092d6d95de9fdfba9e3b219b62 162 ProSitePatterns PS01317 SsrA-binding protein. 33 45 - T 09-03-2017 IPR020081 SsrA-binding protein, conserved site BV404_RS10780 b49d07092d6d95de9fdfba9e3b219b62 162 Hamap MF_00023 SsrA-binding protein [smpB]. 1 162 70.451 T 09-03-2017 IPR000037 SsrA-binding protein GO:0003723 BV404_RS00995 7213ad61e886af2ad9e55a315abdced9 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 45.184 T 09-03-2017 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS00995 7213ad61e886af2ad9e55a315abdced9 179 Pfam PF00281 Ribosomal protein L5 24 80 1.4E-28 T 09-03-2017 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS00995 7213ad61e886af2ad9e55a315abdced9 179 Gene3D G3DSA:3.30.1440.10 2 179 2.9E-80 T 09-03-2017 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS00995 7213ad61e886af2ad9e55a315abdced9 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 09-03-2017 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS00995 7213ad61e886af2ad9e55a315abdced9 179 PIRSF PIRSF002161 1 179 1.4E-66 T 09-03-2017 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS00995 7213ad61e886af2ad9e55a315abdced9 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 1.7E-41 T 09-03-2017 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS00995 7213ad61e886af2ad9e55a315abdced9 179 SUPERFAMILY SSF55282 4 179 5.65E-79 T 09-03-2017 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS02700 a5ab098bb52801f0dc2037434a1bc9f5 255 SMART SM00900 142 240 1.8E-33 T 09-03-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 BV404_RS02700 a5ab098bb52801f0dc2037434a1bc9f5 255 Pfam PF04205 FMN-binding domain 142 237 6.2E-16 T 09-03-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 BV404_RS02700 a5ab098bb52801f0dc2037434a1bc9f5 255 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 6 252 35.784 T 09-03-2017 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 BV404_RS02700 a5ab098bb52801f0dc2037434a1bc9f5 255 PIRSF PIRSF009437 1 255 3.3E-104 T 09-03-2017 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 BV404_RS02700 a5ab098bb52801f0dc2037434a1bc9f5 255 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 5 248 2.2E-94 T 09-03-2017 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 BV404_RS19020 0b2c02a0f21b17ebc1867508a28fa1d2 161 Pfam PF00849 RNA pseudouridylate synthase 11 157 1.4E-32 T 09-03-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BV404_RS19020 0b2c02a0f21b17ebc1867508a28fa1d2 161 SUPERFAMILY SSF55120 5 161 2.24E-51 T 09-03-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 BV404_RS19020 0b2c02a0f21b17ebc1867508a28fa1d2 161 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 50 64 - T 09-03-2017 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 BV404_RS19020 0b2c02a0f21b17ebc1867508a28fa1d2 161 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 5 161 3.7E-59 T 09-03-2017 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 BV404_RS14870 b959b51022a902f18e3e25f27c96dbaa 213 SUPERFAMILY SSF46689 7 80 3.78E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS14870 b959b51022a902f18e3e25f27c96dbaa 213 Gene3D G3DSA:1.10.357.10 7 195 2.2E-35 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 BV404_RS14870 b959b51022a902f18e3e25f27c96dbaa 213 ProSitePatterns PS01081 TetR-type HTH domain signature. 31 61 - T 09-03-2017 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BV404_RS14870 b959b51022a902f18e3e25f27c96dbaa 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 61 1.4E-9 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BV404_RS00035 b959b51022a902f18e3e25f27c96dbaa 213 SUPERFAMILY SSF46689 7 80 3.78E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS00035 b959b51022a902f18e3e25f27c96dbaa 213 Gene3D G3DSA:1.10.357.10 7 195 2.2E-35 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 BV404_RS00035 b959b51022a902f18e3e25f27c96dbaa 213 ProSitePatterns PS01081 TetR-type HTH domain signature. 31 61 - T 09-03-2017 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BV404_RS00035 b959b51022a902f18e3e25f27c96dbaa 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 61 1.4E-9 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BV404_RS01010 df228523ac6c642b7e2f1b40668e9535 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 9.5E-74 T 09-03-2017 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 BV404_RS01010 df228523ac6c642b7e2f1b40668e9535 177 Pfam PF00347 Ribosomal protein L6 11 82 1.5E-20 T 09-03-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS01010 df228523ac6c642b7e2f1b40668e9535 177 Pfam PF00347 Ribosomal protein L6 91 164 2.8E-18 T 09-03-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS01010 df228523ac6c642b7e2f1b40668e9535 177 Gene3D G3DSA:3.90.930.12 2 82 1.8E-29 T 09-03-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS01010 df228523ac6c642b7e2f1b40668e9535 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.417 T 09-03-2017 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 BV404_RS01010 df228523ac6c642b7e2f1b40668e9535 177 SUPERFAMILY SSF56053 83 177 1.07E-35 T 09-03-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS01010 df228523ac6c642b7e2f1b40668e9535 177 PIRSF PIRSF002162 1 177 5.9E-44 T 09-03-2017 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS01010 df228523ac6c642b7e2f1b40668e9535 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 2.4E-33 T 09-03-2017 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 BV404_RS01010 df228523ac6c642b7e2f1b40668e9535 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 2.4E-33 T 09-03-2017 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 BV404_RS01010 df228523ac6c642b7e2f1b40668e9535 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 2.4E-33 T 09-03-2017 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 BV404_RS01010 df228523ac6c642b7e2f1b40668e9535 177 Gene3D G3DSA:3.90.930.12 83 177 8.0E-40 T 09-03-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS01010 df228523ac6c642b7e2f1b40668e9535 177 SUPERFAMILY SSF56053 1 82 4.45E-25 T 09-03-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS01010 df228523ac6c642b7e2f1b40668e9535 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 09-03-2017 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS06450 222b59cb6b9ee274e01a0029a5717f0d 218 Gene3D G3DSA:3.60.15.10 3 213 1.6E-56 T 09-03-2017 IPR001279 Metallo-beta-lactamase BV404_RS06450 222b59cb6b9ee274e01a0029a5717f0d 218 SUPERFAMILY SSF56281 4 211 7.45E-54 T 09-03-2017 IPR001279 Metallo-beta-lactamase BV404_RS06450 222b59cb6b9ee274e01a0029a5717f0d 218 SMART SM00849 14 195 7.4E-37 T 09-03-2017 IPR001279 Metallo-beta-lactamase BV404_RS06450 222b59cb6b9ee274e01a0029a5717f0d 218 Pfam PF00753 Metallo-beta-lactamase superfamily 11 195 1.2E-27 T 09-03-2017 IPR001279 Metallo-beta-lactamase BV404_RS00685 bc893bdd0335c176c33e6556264f3e48 156 Gene3D G3DSA:3.10.420.10 6 155 3.4E-61 T 09-03-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 BV404_RS00685 bc893bdd0335c176c33e6556264f3e48 156 SUPERFAMILY SSF54611 4 144 3.71E-52 T 09-03-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 BV404_RS00685 bc893bdd0335c176c33e6556264f3e48 156 Hamap MF_00821 Protein-export protein SecB [secB]. 1 148 32.399 T 09-03-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 BV404_RS00685 bc893bdd0335c176c33e6556264f3e48 156 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 11 148 9.7E-59 T 09-03-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 BV404_RS00685 bc893bdd0335c176c33e6556264f3e48 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 100 122 5.0E-39 T 09-03-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 BV404_RS00685 bc893bdd0335c176c33e6556264f3e48 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 16 33 5.0E-39 T 09-03-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 BV404_RS00685 bc893bdd0335c176c33e6556264f3e48 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 76 96 5.0E-39 T 09-03-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 BV404_RS00685 bc893bdd0335c176c33e6556264f3e48 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 126 144 5.0E-39 T 09-03-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 BV404_RS00685 bc893bdd0335c176c33e6556264f3e48 156 Pfam PF02556 Preprotein translocase subunit SecB 8 147 1.3E-55 T 09-03-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 BV404_RS13310 2575495aef871798a88862dcd2069eba 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 3.9E-14 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BV404_RS13310 2575495aef871798a88862dcd2069eba 98 PIRSF PIRSF002097 1 98 2.1E-44 T 09-03-2017 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 BV404_RS13310 2575495aef871798a88862dcd2069eba 98 SUPERFAMILY SSF46689 8 98 1.84E-24 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS13310 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 2.0E-31 T 09-03-2017 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 BV404_RS13310 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 2.0E-31 T 09-03-2017 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 BV404_RS13310 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 2.0E-31 T 09-03-2017 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 BV404_RS13310 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 2.0E-31 T 09-03-2017 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 BV404_RS13310 2575495aef871798a88862dcd2069eba 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 3.3E-13 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BV404_RS13310 2575495aef871798a88862dcd2069eba 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 3.3E-13 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BV404_RS13310 2575495aef871798a88862dcd2069eba 98 Gene3D G3DSA:1.10.10.60 27 98 4.1E-27 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS13310 2575495aef871798a88862dcd2069eba 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 31.402 T 09-03-2017 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 BV404_RS00315 cbce49082f9777dbc9ae36648d28a69a 332 SUPERFAMILY SSF47413 6 64 1.2E-13 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 BV404_RS00315 cbce49082f9777dbc9ae36648d28a69a 332 SMART SM00354 6 76 6.4E-27 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BV404_RS00315 cbce49082f9777dbc9ae36648d28a69a 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 53 5.8E-16 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BV404_RS00315 cbce49082f9777dbc9ae36648d28a69a 332 Gene3D G3DSA:1.10.260.40 6 61 4.1E-17 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 BV404_RS00315 cbce49082f9777dbc9ae36648d28a69a 332 Gene3D G3DSA:3.40.50.2300 175 331 1.3E-44 T 09-03-2017 BV404_RS00315 cbce49082f9777dbc9ae36648d28a69a 332 Gene3D G3DSA:3.40.50.2300 63 174 4.0E-38 T 09-03-2017 BV404_RS00315 cbce49082f9777dbc9ae36648d28a69a 332 SUPERFAMILY SSF53822 64 319 6.85E-59 T 09-03-2017 IPR028082 Periplasmic binding protein-like I BV404_RS00315 cbce49082f9777dbc9ae36648d28a69a 332 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 65 310 5.9E-32 T 09-03-2017 IPR001761 Periplasmic binding protein/LacI sugar binding domain BV404_RS01365 99ef0450226eedc783b9cae531f2d708 969 Pfam PF00176 SNF2 family N-terminal domain 174 345 2.5E-16 T 09-03-2017 IPR000330 SNF2-related, N-terminal domain GO:0005524 BV404_RS01365 99ef0450226eedc783b9cae531f2d708 969 Pfam PF12137 RNA polymerase recycling family C-terminal 607 966 2.4E-149 T 09-03-2017 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 BV404_RS01365 99ef0450226eedc783b9cae531f2d708 969 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 967 71.727 T 09-03-2017 IPR023949 RNA polymerase-associated protein RapA GO:0006355 BV404_RS01365 99ef0450226eedc783b9cae531f2d708 969 SMART SM00487 150 342 3.7E-16 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain BV404_RS01365 99ef0450226eedc783b9cae531f2d708 969 Pfam PF00271 Helicase conserved C-terminal domain 494 603 9.7E-15 T 09-03-2017 IPR001650 Helicase, C-terminal BV404_RS01365 99ef0450226eedc783b9cae531f2d708 969 Gene3D G3DSA:3.40.50.300 165 318 4.3E-16 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS01365 99ef0450226eedc783b9cae531f2d708 969 SMART SM00490 519 603 5.1E-17 T 09-03-2017 IPR001650 Helicase, C-terminal BV404_RS01365 99ef0450226eedc783b9cae531f2d708 969 Gene3D G3DSA:3.40.50.300 486 608 7.9E-21 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS01365 99ef0450226eedc783b9cae531f2d708 969 SUPERFAMILY SSF52540 113 355 4.09E-36 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS01365 99ef0450226eedc783b9cae531f2d708 969 SUPERFAMILY SSF52540 273 337 4.03E-43 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS01365 99ef0450226eedc783b9cae531f2d708 969 SUPERFAMILY SSF52540 482 650 4.03E-43 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS08350 338a8a5651cee4450f4b12f69832ff69 215 Pfam PF12840 Helix-turn-helix domain 3 58 7.8E-10 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS08350 338a8a5651cee4450f4b12f69832ff69 215 SUPERFAMILY SSF46785 1 111 4.57E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS08350 338a8a5651cee4450f4b12f69832ff69 215 Gene3D G3DSA:1.10.10.10 1 83 5.3E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS08350 338a8a5651cee4450f4b12f69832ff69 215 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 38 53 2.7E-5 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BV404_RS08350 338a8a5651cee4450f4b12f69832ff69 215 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 53 68 2.7E-5 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BV404_RS08350 338a8a5651cee4450f4b12f69832ff69 215 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 5 20 2.7E-5 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BV404_RS08350 338a8a5651cee4450f4b12f69832ff69 215 SMART SM00418 3 82 3.7E-16 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BV404_RS10645 be80d281d4cb94908922bd405d86d525 85 PRINTS PR01249 Ribosomal protein L31 signature 2 19 9.8E-17 T 09-03-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS10645 be80d281d4cb94908922bd405d86d525 85 PRINTS PR01249 Ribosomal protein L31 signature 59 77 9.8E-17 T 09-03-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS10645 be80d281d4cb94908922bd405d86d525 85 PRINTS PR01249 Ribosomal protein L31 signature 44 59 9.8E-17 T 09-03-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS10645 be80d281d4cb94908922bd405d86d525 85 ProSitePatterns PS01143 Ribosomal protein L31 signature. 48 69 - T 09-03-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS10645 be80d281d4cb94908922bd405d86d525 85 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 4.6E-19 T 09-03-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS10645 be80d281d4cb94908922bd405d86d525 85 Pfam PF01197 Ribosomal protein L31 1 77 1.4E-27 T 09-03-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS10645 be80d281d4cb94908922bd405d86d525 85 SUPERFAMILY SSF143800 1 80 3.22E-23 T 09-03-2017 BV404_RS10645 be80d281d4cb94908922bd405d86d525 85 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 27.147 T 09-03-2017 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS01770 33150e0aa359bd94d3102bd3c1fccdfb 125 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 86 8.0E-33 T 09-03-2017 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 BV404_RS01770 33150e0aa359bd94d3102bd3c1fccdfb 125 SUPERFAMILY SSF56214 1 124 3.4E-32 T 09-03-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 BV404_RS01770 33150e0aa359bd94d3102bd3c1fccdfb 125 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 125 27.066 T 09-03-2017 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 BV404_RS01770 33150e0aa359bd94d3102bd3c1fccdfb 125 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 1 124 9.7E-35 T 09-03-2017 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 BV404_RS01770 33150e0aa359bd94d3102bd3c1fccdfb 125 Gene3D G3DSA:3.90.470.20 1 124 3.6E-43 T 09-03-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 BV404_RS01770 33150e0aa359bd94d3102bd3c1fccdfb 125 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 120 5.5E-25 T 09-03-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 BV404_RS01770 33150e0aa359bd94d3102bd3c1fccdfb 125 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 124 8.3E-45 T 09-03-2017 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 BV404_RS05405 18efdf76f1ee72c0c15bed7ac3479929 300 SUPERFAMILY SSF161098 96 281 1.14E-26 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS05405 18efdf76f1ee72c0c15bed7ac3479929 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 298 1.7E-27 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS05405 18efdf76f1ee72c0c15bed7ac3479929 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 76 1.2E-14 T 09-03-2017 IPR025966 Oligopeptide transport permease C-like, N-terminal domain BV404_RS05405 18efdf76f1ee72c0c15bed7ac3479929 300 Gene3D G3DSA:1.10.3720.10 96 297 1.3E-25 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS05530 f19ad679dd72e115087dea6a2a63e68b 322 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 130 303 6.3E-22 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS05530 f19ad679dd72e115087dea6a2a63e68b 322 Gene3D G3DSA:1.10.3720.10 105 313 7.2E-22 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS05530 f19ad679dd72e115087dea6a2a63e68b 322 SUPERFAMILY SSF161098 106 304 1.28E-25 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS00875 9e3e65ef968bf6a3790e50b6a0a83abc 640 Gene3D G3DSA:3.40.50.300 2 274 4.3E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS00875 9e3e65ef968bf6a3790e50b6a0a83abc 640 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS00875 9e3e65ef968bf6a3790e50b6a0a83abc 640 SUPERFAMILY SSF52540 277 494 1.08E-42 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS00875 9e3e65ef968bf6a3790e50b6a0a83abc 640 SUPERFAMILY SSF52540 119 255 5.41E-43 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS00875 9e3e65ef968bf6a3790e50b6a0a83abc 640 SUPERFAMILY SSF52540 2 92 5.41E-43 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS00875 9e3e65ef968bf6a3790e50b6a0a83abc 640 SMART SM00382 26 223 5.9E-12 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS00875 9e3e65ef968bf6a3790e50b6a0a83abc 640 SMART SM00382 337 503 1.1E-10 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS00875 9e3e65ef968bf6a3790e50b6a0a83abc 640 Gene3D G3DSA:3.40.50.300 310 542 6.6E-43 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS00875 9e3e65ef968bf6a3790e50b6a0a83abc 640 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS00875 9e3e65ef968bf6a3790e50b6a0a83abc 640 Pfam PF12848 ABC transporter 217 294 6.9E-28 T 09-03-2017 IPR032781 ABC-transporter extension domain BV404_RS00875 9e3e65ef968bf6a3790e50b6a0a83abc 640 Pfam PF00005 ABC transporter 328 459 3.9E-24 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS00875 9e3e65ef968bf6a3790e50b6a0a83abc 640 Pfam PF00005 ABC transporter 17 178 1.5E-20 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS02450 a40cf515ce2e923fd36bda4bd13bad73 948 Pfam PF08264 Anticodon-binding domain of tRNA 690 852 1.7E-26 T 09-03-2017 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 BV404_RS02450 a40cf515ce2e923fd36bda4bd13bad73 948 Gene3D G3DSA:3.40.50.620 408 641 5.6E-139 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS02450 a40cf515ce2e923fd36bda4bd13bad73 948 Gene3D G3DSA:3.40.50.620 17 205 5.6E-139 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS02450 a40cf515ce2e923fd36bda4bd13bad73 948 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 646 6.5E-231 T 09-03-2017 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 BV404_RS02450 a40cf515ce2e923fd36bda4bd13bad73 948 SUPERFAMILY SSF47323 657 939 3.55E-74 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BV404_RS02450 a40cf515ce2e923fd36bda4bd13bad73 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 5.3E-32 T 09-03-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 BV404_RS02450 a40cf515ce2e923fd36bda4bd13bad73 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 566 575 5.3E-32 T 09-03-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 BV404_RS02450 a40cf515ce2e923fd36bda4bd13bad73 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 241 264 5.3E-32 T 09-03-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 BV404_RS02450 a40cf515ce2e923fd36bda4bd13bad73 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 531 544 5.3E-32 T 09-03-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 BV404_RS02450 a40cf515ce2e923fd36bda4bd13bad73 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 406 421 5.3E-32 T 09-03-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 BV404_RS02450 a40cf515ce2e923fd36bda4bd13bad73 948 Gene3D G3DSA:3.90.740.10 207 394 3.1E-55 T 09-03-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 BV404_RS02450 a40cf515ce2e923fd36bda4bd13bad73 948 SUPERFAMILY SSF50677 203 408 7.19E-55 T 09-03-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 BV404_RS02450 a40cf515ce2e923fd36bda4bd13bad73 948 SUPERFAMILY SSF52374 408 652 2.92E-138 T 09-03-2017 BV404_RS02450 a40cf515ce2e923fd36bda4bd13bad73 948 SUPERFAMILY SSF52374 4 202 2.92E-138 T 09-03-2017 BV404_RS02450 a40cf515ce2e923fd36bda4bd13bad73 948 Gene3D G3DSA:1.10.730.10 646 838 2.2E-39 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BV404_RS02450 a40cf515ce2e923fd36bda4bd13bad73 948 Pfam PF06827 Zinc finger found in FPG and IleRS 909 936 9.6E-7 T 09-03-2017 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 BV404_RS02450 a40cf515ce2e923fd36bda4bd13bad73 948 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 854 6.5E-295 T 09-03-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 BV404_RS02450 a40cf515ce2e923fd36bda4bd13bad73 948 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 939 21.534 T 09-03-2017 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 BV404_RS02450 a40cf515ce2e923fd36bda4bd13bad73 948 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 09-03-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BV404_RS02105 febb3670c0f593a77224e6881ec8653c 291 Gene3D G3DSA:3.30.420.40 3 57 2.9E-4 T 09-03-2017 BV404_RS02105 febb3670c0f593a77224e6881ec8653c 291 SUPERFAMILY SSF53067 114 283 1.12E-43 T 09-03-2017 BV404_RS02105 febb3670c0f593a77224e6881ec8653c 291 SUPERFAMILY SSF53067 1 112 7.56E-24 T 09-03-2017 BV404_RS02105 febb3670c0f593a77224e6881ec8653c 291 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 6 283 5.1E-41 T 09-03-2017 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 BV404_RS12595 6599525931dc0bb3bd86a78066ce9ed1 191 SUPERFAMILY SSF54523 8 166 1.49E-13 T 09-03-2017 BV404_RS12595 6599525931dc0bb3bd86a78066ce9ed1 191 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 3 27 1.2E-7 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site BV404_RS12595 6599525931dc0bb3bd86a78066ce9ed1 191 Gene3D G3DSA:3.30.700.10 8 57 1.3E-6 T 09-03-2017 BV404_RS12595 6599525931dc0bb3bd86a78066ce9ed1 191 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site BV404_RS12595 6599525931dc0bb3bd86a78066ce9ed1 191 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 28 8.0E-7 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site BV404_RS12015 2bcae2c53d0a96eaf320e3b3f60e0c0d 339 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 1.0E-134 T 09-03-2017 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 BV404_RS12015 2bcae2c53d0a96eaf320e3b3f60e0c0d 339 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 09-03-2017 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618|Reactome: R-HSA-6782315 BV404_RS12015 2bcae2c53d0a96eaf320e3b3f60e0c0d 339 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 62.958 T 09-03-2017 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 BV404_RS12015 2bcae2c53d0a96eaf320e3b3f60e0c0d 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 1.3E-50 T 09-03-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 BV404_RS12015 2bcae2c53d0a96eaf320e3b3f60e0c0d 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 1.3E-50 T 09-03-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 BV404_RS12015 2bcae2c53d0a96eaf320e3b3f60e0c0d 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 1.3E-50 T 09-03-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 BV404_RS12015 2bcae2c53d0a96eaf320e3b3f60e0c0d 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 1.3E-50 T 09-03-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 BV404_RS12015 2bcae2c53d0a96eaf320e3b3f60e0c0d 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 1.3E-50 T 09-03-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 BV404_RS12015 2bcae2c53d0a96eaf320e3b3f60e0c0d 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 1.3E-50 T 09-03-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 BV404_RS12015 2bcae2c53d0a96eaf320e3b3f60e0c0d 339 SUPERFAMILY SSF53067 3 123 4.73E-31 T 09-03-2017 BV404_RS12015 2bcae2c53d0a96eaf320e3b3f60e0c0d 339 Gene3D G3DSA:3.30.420.40 1 159 2.1E-48 T 09-03-2017 BV404_RS12015 2bcae2c53d0a96eaf320e3b3f60e0c0d 339 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 5 306 1.3E-123 T 09-03-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 BV404_RS12015 2bcae2c53d0a96eaf320e3b3f60e0c0d 339 Pfam PF00814 Glycoprotease family 24 307 5.4E-103 T 09-03-2017 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 BV404_RS12015 2bcae2c53d0a96eaf320e3b3f60e0c0d 339 SUPERFAMILY SSF53067 101 309 4.95E-45 T 09-03-2017 BV404_RS09385 7a7448a15917bb91551dd8e7f846dc54 323 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 23 322 2.4E-112 T 09-03-2017 IPR011970 Lytic murein transglycosylase BV404_RS09385 7a7448a15917bb91551dd8e7f846dc54 323 Pfam PF13406 Transglycosylase SLT domain 23 319 1.1E-110 T 09-03-2017 IPR031304 Transglycosylase SLT domain 2 BV404_RS09385 7a7448a15917bb91551dd8e7f846dc54 323 SUPERFAMILY SSF53955 8 322 7.5E-103 T 09-03-2017 IPR023346 Lysozyme-like domain BV404_RS09385 7a7448a15917bb91551dd8e7f846dc54 323 Gene3D G3DSA:1.10.530.10 205 322 3.2E-61 T 09-03-2017 BV404_RS09385 7a7448a15917bb91551dd8e7f846dc54 323 Gene3D G3DSA:1.10.530.10 68 124 3.2E-61 T 09-03-2017 BV404_RS00940 fa9677e60e5a3f674ca50ffae4e549b6 200 SUPERFAMILY SSF52166 8 199 2.09E-73 T 09-03-2017 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 BV404_RS00940 fa9677e60e5a3f674ca50ffae4e549b6 200 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 12 197 4.6E-76 T 09-03-2017 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS00940 fa9677e60e5a3f674ca50ffae4e549b6 200 Gene3D G3DSA:3.40.1370.10 52 200 1.9E-59 T 09-03-2017 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 BV404_RS00940 fa9677e60e5a3f674ca50ffae4e549b6 200 Pfam PF00573 Ribosomal protein L4/L1 family 12 197 4.7E-65 T 09-03-2017 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 BV404_RS00940 fa9677e60e5a3f674ca50ffae4e549b6 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 3 200 33.983 T 09-03-2017 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS12480 1e1fd0a0be6855e6dfbad0415d6ec077 310 SUPERFAMILY SSF56327 146 309 2.01E-40 T 09-03-2017 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 BV404_RS12480 1e1fd0a0be6855e6dfbad0415d6ec077 310 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 09-03-2017 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 BV404_RS12480 1e1fd0a0be6855e6dfbad0415d6ec077 310 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 310 57.747 T 09-03-2017 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 BV404_RS12480 1e1fd0a0be6855e6dfbad0415d6ec077 310 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 308 3.4E-47 T 09-03-2017 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 BV404_RS12480 1e1fd0a0be6855e6dfbad0415d6ec077 310 SUPERFAMILY SSF51735 1 145 3.67E-39 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS12480 1e1fd0a0be6855e6dfbad0415d6ec077 310 Gene3D G3DSA:3.90.110.10 147 310 4.5E-61 T 09-03-2017 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 BV404_RS12480 1e1fd0a0be6855e6dfbad0415d6ec077 310 PIRSF PIRSF000102 1 306 2.6E-61 T 09-03-2017 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 BV404_RS12480 1e1fd0a0be6855e6dfbad0415d6ec077 310 Gene3D G3DSA:3.40.50.720 1 146 8.3E-58 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS12480 1e1fd0a0be6855e6dfbad0415d6ec077 310 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 310 3.1E-128 T 09-03-2017 IPR010097 Malate dehydrogenase, type 1 GO:0006108|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 BV404_RS12480 1e1fd0a0be6855e6dfbad0415d6ec077 310 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 1.0E-46 T 09-03-2017 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 BV404_RS01025 fa2b6ea283a1d2ae93ee95c140b5adcb 58 SUPERFAMILY SSF55129 1 58 1.83E-23 T 09-03-2017 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain BV404_RS01025 fa2b6ea283a1d2ae93ee95c140b5adcb 58 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 22.06 T 09-03-2017 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 BV404_RS01025 fa2b6ea283a1d2ae93ee95c140b5adcb 58 Gene3D G3DSA:3.30.1390.20 1 58 4.5E-33 T 09-03-2017 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain BV404_RS01025 fa2b6ea283a1d2ae93ee95c140b5adcb 58 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 2.5E-21 T 09-03-2017 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain BV404_RS01025 fa2b6ea283a1d2ae93ee95c140b5adcb 58 PIRSF PIRSF002211 1 58 1.0E-28 T 09-03-2017 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 BV404_RS01025 fa2b6ea283a1d2ae93ee95c140b5adcb 58 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 9.1E-27 T 09-03-2017 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 BV404_RS01025 fa2b6ea283a1d2ae93ee95c140b5adcb 58 ProSitePatterns PS00634 Ribosomal protein L30 signature. 22 54 - T 09-03-2017 IPR018038 Ribosomal protein L30, conserved site BV404_RS07400 215eaa892ac3a26a833eb8f197f05e9e 159 Gene3D G3DSA:3.10.129.10 11 155 1.1E-25 T 09-03-2017 IPR029069 HotDog domain BV404_RS07400 215eaa892ac3a26a833eb8f197f05e9e 159 Pfam PF14539 Domain of unknown function (DUF4442) 17 106 5.4E-7 T 09-03-2017 IPR027961 Protein of unknown function DUF4442 BV404_RS07400 215eaa892ac3a26a833eb8f197f05e9e 159 SUPERFAMILY SSF54637 12 126 4.48E-14 T 09-03-2017 IPR029069 HotDog domain BV404_RS11285 3c7363bd4e69c128b7379fba613ef302 406 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 157 357 1.7E-7 T 09-03-2017 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain BV404_RS11285 3c7363bd4e69c128b7379fba613ef302 406 Gene3D G3DSA:3.40.50.300 152 391 3.4E-39 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11285 3c7363bd4e69c128b7379fba613ef302 406 SUPERFAMILY SSF52540 154 393 5.98E-28 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS12375 4b9e50aa41b51bec34b36b14bbe7fc80 541 SMART SM01049 30 124 6.0E-18 T 09-03-2017 IPR033480 Single Cache domain 2 BV404_RS12375 4b9e50aa41b51bec34b36b14bbe7fc80 541 SMART SM00283 277 538 3.5E-65 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 BV404_RS12375 4b9e50aa41b51bec34b36b14bbe7fc80 541 SUPERFAMILY SSF58104 259 539 2.35E-67 T 09-03-2017 BV404_RS12375 4b9e50aa41b51bec34b36b14bbe7fc80 541 Gene3D G3DSA:1.10.287.950 292 505 1.3E-53 T 09-03-2017 BV404_RS12375 4b9e50aa41b51bec34b36b14bbe7fc80 541 Gene3D G3DSA:3.30.450.20 18 173 8.0E-32 T 09-03-2017 BV404_RS12375 4b9e50aa41b51bec34b36b14bbe7fc80 541 Pfam PF17200 Single Cache domain 2 35 185 6.9E-35 T 09-03-2017 IPR033480 Single Cache domain 2 BV404_RS12375 4b9e50aa41b51bec34b36b14bbe7fc80 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 343 537 1.1E-47 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 BV404_RS12375 4b9e50aa41b51bec34b36b14bbe7fc80 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 402 7.0E-23 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 BV404_RS12375 4b9e50aa41b51bec34b36b14bbe7fc80 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 3 28 7.0E-23 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 BV404_RS12375 4b9e50aa41b51bec34b36b14bbe7fc80 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 433 7.0E-23 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 BV404_RS13595 aeb64ebebebee72d11d57b4ce11bcbcc 278 Pfam PF06827 Zinc finger found in FPG and IleRS 241 269 6.9E-11 T 09-03-2017 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 BV404_RS13595 aeb64ebebebee72d11d57b4ce11bcbcc 278 SMART SM00898 2 115 1.2E-50 T 09-03-2017 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 BV404_RS13595 aeb64ebebebee72d11d57b4ce11bcbcc 278 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 7.3E-27 T 09-03-2017 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 BV404_RS13595 aeb64ebebebee72d11d57b4ce11bcbcc 278 Gene3D G3DSA:3.20.190.10 2 129 2.7E-36 T 09-03-2017 BV404_RS13595 aeb64ebebebee72d11d57b4ce11bcbcc 278 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 9.9E-31 T 09-03-2017 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 BV404_RS13595 aeb64ebebebee72d11d57b4ce11bcbcc 278 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 09-03-2017 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 BV404_RS13595 aeb64ebebebee72d11d57b4ce11bcbcc 278 SUPERFAMILY SSF57716 217 269 1.03E-17 T 09-03-2017 BV404_RS13595 aeb64ebebebee72d11d57b4ce11bcbcc 278 SUPERFAMILY SSF81624 2 138 1.07E-39 T 09-03-2017 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 BV404_RS13595 aeb64ebebebee72d11d57b4ce11bcbcc 278 Gene3D G3DSA:1.10.8.50 130 269 9.3E-52 T 09-03-2017 BV404_RS13595 aeb64ebebebee72d11d57b4ce11bcbcc 278 SUPERFAMILY SSF46946 130 221 3.53E-30 T 09-03-2017 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 BV404_RS13595 aeb64ebebebee72d11d57b4ce11bcbcc 278 SMART SM01232 129 221 3.1E-46 T 09-03-2017 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 BV404_RS13595 aeb64ebebebee72d11d57b4ce11bcbcc 278 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 1.3E-94 T 09-03-2017 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 BV404_RS13595 aeb64ebebebee72d11d57b4ce11bcbcc 278 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 43.487 T 09-03-2017 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 BV404_RS00470 fab4c1e97cd4aa174ddc9107cdca41dd 205 PRINTS PR01703 Manganese superoxide dismutase signature 161 173 3.8E-22 T 09-03-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BV404_RS00470 fab4c1e97cd4aa174ddc9107cdca41dd 205 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 3.8E-22 T 09-03-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BV404_RS00470 fab4c1e97cd4aa174ddc9107cdca41dd 205 PRINTS PR01703 Manganese superoxide dismutase signature 68 81 3.8E-22 T 09-03-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BV404_RS00470 fab4c1e97cd4aa174ddc9107cdca41dd 205 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 3.8E-22 T 09-03-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BV404_RS00470 fab4c1e97cd4aa174ddc9107cdca41dd 205 PRINTS PR01703 Manganese superoxide dismutase signature 121 129 3.8E-22 T 09-03-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BV404_RS00470 fab4c1e97cd4aa174ddc9107cdca41dd 205 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 84 3.8E-26 T 09-03-2017 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BV404_RS00470 fab4c1e97cd4aa174ddc9107cdca41dd 205 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 92 195 1.9E-40 T 09-03-2017 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BV404_RS00470 fab4c1e97cd4aa174ddc9107cdca41dd 205 SUPERFAMILY SSF54719 88 200 3.4E-44 T 09-03-2017 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BV404_RS00470 fab4c1e97cd4aa174ddc9107cdca41dd 205 SUPERFAMILY SSF46609 1 86 3.27E-29 T 09-03-2017 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BV404_RS00470 fab4c1e97cd4aa174ddc9107cdca41dd 205 Gene3D G3DSA:1.10.287.990 20 85 7.0E-22 T 09-03-2017 BV404_RS00470 fab4c1e97cd4aa174ddc9107cdca41dd 205 PIRSF PIRSF000349 1 204 1.0E-79 T 09-03-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BV404_RS00470 fab4c1e97cd4aa174ddc9107cdca41dd 205 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 163 170 - T 09-03-2017 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BV404_RS01035 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 Pfam PF00344 SecY translocase 76 418 9.5E-119 T 09-03-2017 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BV404_RS01035 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 SUPERFAMILY SSF103491 15 425 3.4E-131 T 09-03-2017 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BV404_RS01035 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 371 389 5.9E-96 T 09-03-2017 BV404_RS01035 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 403 421 5.9E-96 T 09-03-2017 BV404_RS01035 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 152 177 5.9E-96 T 09-03-2017 BV404_RS01035 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 5.9E-96 T 09-03-2017 BV404_RS01035 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 5.9E-96 T 09-03-2017 BV404_RS01035 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 5.9E-96 T 09-03-2017 BV404_RS01035 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 316 338 5.9E-96 T 09-03-2017 BV404_RS01035 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 178 201 5.9E-96 T 09-03-2017 BV404_RS01035 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 270 289 5.9E-96 T 09-03-2017 BV404_RS01035 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 PIRSF PIRSF004557 10 442 1.9E-122 T 09-03-2017 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BV404_RS01035 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 Gene3D G3DSA:1.10.3370.10 15 438 1.8E-164 T 09-03-2017 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BV404_RS01035 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 430 8.7E-135 T 09-03-2017 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BV404_RS01035 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 Hamap MF_01465 Protein translocase subunit SecY [secY]. 9 434 29.236 T 09-03-2017 IPR026593 Protein translocase subunit SecY BV404_RS01035 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 09-03-2017 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BV404_RS01035 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 ProSitePatterns PS00756 Protein secY signature 2. 171 188 - T 09-03-2017 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BV404_RS01755 14751d693beb5487cb34cc950c2e8aae 321 Hamap MF_00367 GTPase Era [era]. 25 317 35.227 T 09-03-2017 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 BV404_RS01755 14751d693beb5487cb34cc950c2e8aae 321 TIGRFAM TIGR00436 era: GTP-binding protein Era 28 300 1.3E-108 T 09-03-2017 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 BV404_RS01755 14751d693beb5487cb34cc950c2e8aae 321 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 27 188 4.7E-38 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 BV404_RS01755 14751d693beb5487cb34cc950c2e8aae 321 SUPERFAMILY SSF54814 201 317 6.54E-40 T 09-03-2017 IPR009019 K homology domain, prokaryotic type GO:0003723 BV404_RS01755 14751d693beb5487cb34cc950c2e8aae 321 Gene3D G3DSA:3.40.50.300 28 212 9.2E-44 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS01755 14751d693beb5487cb34cc950c2e8aae 321 Pfam PF01926 50S ribosome-binding GTPase 30 144 9.5E-23 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 BV404_RS01755 14751d693beb5487cb34cc950c2e8aae 321 SUPERFAMILY SSF52540 30 225 4.91E-46 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS01755 14751d693beb5487cb34cc950c2e8aae 321 Gene3D G3DSA:3.30.300.20 213 314 8.8E-39 T 09-03-2017 IPR015946 K homology domain-like, alpha/beta BV404_RS01755 14751d693beb5487cb34cc950c2e8aae 321 Pfam PF07650 KH domain 228 305 2.5E-19 T 09-03-2017 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS03050 273797d62d70f0df037a7016e2862afa 346 SUPERFAMILY SSF56042 172 342 6.73E-62 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain BV404_RS03050 273797d62d70f0df037a7016e2862afa 346 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 345 47.428 T 09-03-2017 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BV404_RS03050 273797d62d70f0df037a7016e2862afa 346 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 8 334 2.8E-150 T 09-03-2017 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BV404_RS03050 273797d62d70f0df037a7016e2862afa 346 Pfam PF02769 AIR synthase related protein, C-terminal domain 178 343 4.7E-39 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain BV404_RS03050 273797d62d70f0df037a7016e2862afa 346 Gene3D G3DSA:3.30.1330.10 23 171 4.4E-65 T 09-03-2017 IPR016188 PurM-like, N-terminal domain BV404_RS03050 273797d62d70f0df037a7016e2862afa 346 SUPERFAMILY SSF55326 8 171 2.99E-54 T 09-03-2017 BV404_RS03050 273797d62d70f0df037a7016e2862afa 346 Pfam PF00586 AIR synthase related protein, N-terminal domain 57 165 6.1E-16 T 09-03-2017 IPR016188 PurM-like, N-terminal domain BV404_RS03050 273797d62d70f0df037a7016e2862afa 346 Gene3D G3DSA:3.90.650.10 172 344 1.9E-68 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain BV404_RS06270 9c0eddb57ef26d1a732abd9e74d9dad5 478 Pfam PF13460 NAD(P)H-binding 8 151 9.4E-14 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS06270 9c0eddb57ef26d1a732abd9e74d9dad5 478 SUPERFAMILY SSF51735 1 285 1.6E-42 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS06270 9c0eddb57ef26d1a732abd9e74d9dad5 478 Gene3D G3DSA:3.40.50.720 1 222 4.6E-30 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS06270 9c0eddb57ef26d1a732abd9e74d9dad5 478 Pfam PF11066 Protein of unknown function (DUF2867) 333 465 1.1E-14 T 09-03-2017 IPR021295 Protein of unknown function DUF2867 BV404_RS03095 9a8d11bcd0c77e3ed33c770911066135 908 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 323 899 2.3E-185 T 09-03-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BV404_RS03095 9a8d11bcd0c77e3ed33c770911066135 908 SUPERFAMILY SSF56784 590 610 6.79E-59 T 09-03-2017 IPR023214 HAD-like domain BV404_RS03095 9a8d11bcd0c77e3ed33c770911066135 908 SUPERFAMILY SSF56784 648 896 6.79E-59 T 09-03-2017 IPR023214 HAD-like domain BV404_RS03095 9a8d11bcd0c77e3ed33c770911066135 908 Gene3D G3DSA:3.40.1110.10 609 717 2.3E-21 T 09-03-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 BV404_RS03095 9a8d11bcd0c77e3ed33c770911066135 908 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 362 868 7.2E-90 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 BV404_RS03095 9a8d11bcd0c77e3ed33c770911066135 908 Gene3D G3DSA:3.30.70.100 170 249 7.1E-23 T 09-03-2017 BV404_RS03095 9a8d11bcd0c77e3ed33c770911066135 908 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 813 825 2.2E-29 T 09-03-2017 BV404_RS03095 9a8d11bcd0c77e3ed33c770911066135 908 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 592 606 2.2E-29 T 09-03-2017 BV404_RS03095 9a8d11bcd0c77e3ed33c770911066135 908 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 715 726 2.2E-29 T 09-03-2017 BV404_RS03095 9a8d11bcd0c77e3ed33c770911066135 908 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 737 747 2.2E-29 T 09-03-2017 BV404_RS03095 9a8d11bcd0c77e3ed33c770911066135 908 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 790 809 2.2E-29 T 09-03-2017 BV404_RS03095 9a8d11bcd0c77e3ed33c770911066135 908 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 440 454 2.2E-29 T 09-03-2017 BV404_RS03095 9a8d11bcd0c77e3ed33c770911066135 908 Gene3D G3DSA:3.30.70.100 67 125 1.3E-7 T 09-03-2017 BV404_RS03095 9a8d11bcd0c77e3ed33c770911066135 908 Pfam PF00403 Heavy-metal-associated domain 174 230 2.7E-13 T 09-03-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 BV404_RS03095 9a8d11bcd0c77e3ed33c770911066135 908 Gene3D G3DSA:3.40.50.1000 718 858 1.7E-55 T 09-03-2017 IPR023214 HAD-like domain BV404_RS03095 9a8d11bcd0c77e3ed33c770911066135 908 Gene3D G3DSA:3.40.50.1000 564 608 1.7E-55 T 09-03-2017 IPR023214 HAD-like domain BV404_RS03095 9a8d11bcd0c77e3ed33c770911066135 908 SUPERFAMILY SSF81665 348 394 2.35E-11 T 09-03-2017 BV404_RS03095 9a8d11bcd0c77e3ed33c770911066135 908 SUPERFAMILY SSF81665 491 586 2.35E-11 T 09-03-2017 BV404_RS03095 9a8d11bcd0c77e3ed33c770911066135 908 SUPERFAMILY SSF81665 839 854 2.35E-11 T 09-03-2017 BV404_RS03095 9a8d11bcd0c77e3ed33c770911066135 908 PRINTS PR00943 Copper-transporting ATPase signature 184 198 9.7E-15 T 09-03-2017 BV404_RS03095 9a8d11bcd0c77e3ed33c770911066135 908 PRINTS PR00943 Copper-transporting ATPase signature 380 398 9.7E-15 T 09-03-2017 BV404_RS03095 9a8d11bcd0c77e3ed33c770911066135 908 PRINTS PR00943 Copper-transporting ATPase signature 513 527 9.7E-15 T 09-03-2017 BV404_RS03095 9a8d11bcd0c77e3ed33c770911066135 908 PRINTS PR00943 Copper-transporting ATPase signature 575 590 9.7E-15 T 09-03-2017 BV404_RS03095 9a8d11bcd0c77e3ed33c770911066135 908 PRINTS PR00943 Copper-transporting ATPase signature 767 784 9.7E-15 T 09-03-2017 BV404_RS03095 9a8d11bcd0c77e3ed33c770911066135 908 PRINTS PR00943 Copper-transporting ATPase signature 824 838 9.7E-15 T 09-03-2017 BV404_RS03095 9a8d11bcd0c77e3ed33c770911066135 908 PRINTS PR00943 Copper-transporting ATPase signature 863 877 9.7E-15 T 09-03-2017 BV404_RS03095 9a8d11bcd0c77e3ed33c770911066135 908 PRINTS PR00943 Copper-transporting ATPase signature 308 327 9.7E-15 T 09-03-2017 BV404_RS03095 9a8d11bcd0c77e3ed33c770911066135 908 Gene3D G3DSA:2.70.150.10 337 491 7.2E-29 T 09-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 BV404_RS03095 9a8d11bcd0c77e3ed33c770911066135 908 SUPERFAMILY SSF55008 66 129 1.96E-6 T 09-03-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 BV404_RS03095 9a8d11bcd0c77e3ed33c770911066135 908 ProSitePatterns PS01229 Hypothetical cof family signature 2. 790 812 - T 09-03-2017 BV404_RS03095 9a8d11bcd0c77e3ed33c770911066135 908 Pfam PF00702 haloacid dehalogenase-like hydrolase 588 804 1.3E-47 T 09-03-2017 BV404_RS03095 9a8d11bcd0c77e3ed33c770911066135 908 Pfam PF00122 E1-E2 ATPase 361 582 3.3E-59 T 09-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 BV404_RS03095 9a8d11bcd0c77e3ed33c770911066135 908 SUPERFAMILY SSF55008 170 236 1.57E-18 T 09-03-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 BV404_RS03095 9a8d11bcd0c77e3ed33c770911066135 908 SUPERFAMILY SSF81653 393 490 8.37E-24 T 09-03-2017 BV404_RS03095 9a8d11bcd0c77e3ed33c770911066135 908 ProSitePatterns PS01047 Heavy-metal-associated domain. 174 203 - T 09-03-2017 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 BV404_RS03095 9a8d11bcd0c77e3ed33c770911066135 908 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 304 900 8.1E-184 T 09-03-2017 BV404_RS03095 9a8d11bcd0c77e3ed33c770911066135 908 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 594 600 - T 09-03-2017 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 BV404_RS06385 27bb354864bc58148d11682fa1a103c1 92 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 74 4.5E-10 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 BV404_RS06385 27bb354864bc58148d11682fa1a103c1 92 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 35 43 - T 09-03-2017 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 BV404_RS06385 27bb354864bc58148d11682fa1a103c1 92 SUPERFAMILY SSF54292 11 85 6.03E-19 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 BV404_RS06385 27bb354864bc58148d11682fa1a103c1 92 Gene3D G3DSA:3.10.20.30 11 83 3.6E-18 T 09-03-2017 IPR012675 Beta-grasp domain BV404_RS10460 171f85e8d94e04d74a1a3d6eaf2784a3 380 Gene3D G3DSA:3.30.1950.10 93 167 9.1E-32 T 09-03-2017 BV404_RS10460 171f85e8d94e04d74a1a3d6eaf2784a3 380 Gene3D G3DSA:3.10.560.10 168 247 1.3E-29 T 09-03-2017 BV404_RS10460 171f85e8d94e04d74a1a3d6eaf2784a3 380 Pfam PF02563 Polysaccharide biosynthesis/export protein 84 168 3.5E-27 T 09-03-2017 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 BV404_RS10460 171f85e8d94e04d74a1a3d6eaf2784a3 380 Gene3D G3DSA:3.10.560.10 248 345 5.7E-32 T 09-03-2017 BV404_RS10460 171f85e8d94e04d74a1a3d6eaf2784a3 380 Pfam PF10531 SLBB domain 176 223 2.2E-9 T 09-03-2017 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BV404_RS10460 171f85e8d94e04d74a1a3d6eaf2784a3 380 Pfam PF10531 SLBB domain 259 305 2.1E-5 T 09-03-2017 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BV404_RS10460 171f85e8d94e04d74a1a3d6eaf2784a3 380 Gene3D G3DSA:1.20.5.70 347 380 1.2E-19 T 09-03-2017 BV404_RS03725 ae1532f3a1bc89b3da16b3fcd5051f65 298 SUPERFAMILY SSF46785 1 86 2.8E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS03725 ae1532f3a1bc89b3da16b3fcd5051f65 298 Gene3D G3DSA:3.40.190.10 89 175 1.5E-12 T 09-03-2017 BV404_RS03725 ae1532f3a1bc89b3da16b3fcd5051f65 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 4.9E-21 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS03725 ae1532f3a1bc89b3da16b3fcd5051f65 298 Pfam PF03466 LysR substrate binding domain 88 288 1.6E-41 T 09-03-2017 IPR005119 LysR, substrate-binding BV404_RS03725 ae1532f3a1bc89b3da16b3fcd5051f65 298 Gene3D G3DSA:1.10.10.10 1 84 1.3E-28 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS03725 ae1532f3a1bc89b3da16b3fcd5051f65 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.5E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS03725 ae1532f3a1bc89b3da16b3fcd5051f65 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.5E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS03725 ae1532f3a1bc89b3da16b3fcd5051f65 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.5E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS03725 ae1532f3a1bc89b3da16b3fcd5051f65 298 Gene3D G3DSA:3.40.190.10 176 260 2.2E-25 T 09-03-2017 BV404_RS03725 ae1532f3a1bc89b3da16b3fcd5051f65 298 SUPERFAMILY SSF53850 90 292 2.92E-38 T 09-03-2017 BV404_RS07985 4937ada49668854d83ca825e7dba1abb 203 SMART SM00903 19 167 1.4E-6 T 09-03-2017 IPR002563 Flavin reductase like domain GO:0010181 BV404_RS07985 4937ada49668854d83ca825e7dba1abb 203 SUPERFAMILY SSF50475 1 198 1.62E-35 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 BV404_RS07985 4937ada49668854d83ca825e7dba1abb 203 Pfam PF01613 Flavin reductase like domain 22 163 9.9E-18 T 09-03-2017 IPR002563 Flavin reductase like domain GO:0010181 BV404_RS07985 4937ada49668854d83ca825e7dba1abb 203 Gene3D G3DSA:2.30.110.10 12 191 4.4E-54 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 BV404_RS09135 cffa0877ea5aa5106896ba6dab9ec2bd 259 SUPERFAMILY SSF47240 11 61 4.06E-75 T 09-03-2017 IPR009078 Ferritin-like superfamily BV404_RS09135 cffa0877ea5aa5106896ba6dab9ec2bd 259 SUPERFAMILY SSF47240 109 255 4.06E-75 T 09-03-2017 IPR009078 Ferritin-like superfamily BV404_RS09135 cffa0877ea5aa5106896ba6dab9ec2bd 259 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 9 252 5.1E-121 T 09-03-2017 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 BV404_RS09135 cffa0877ea5aa5106896ba6dab9ec2bd 259 Gene3D G3DSA:1.20.1260.10 109 256 7.6E-90 T 09-03-2017 IPR012347 Ferritin-related BV404_RS09135 cffa0877ea5aa5106896ba6dab9ec2bd 259 Gene3D G3DSA:1.20.1260.10 8 61 7.6E-90 T 09-03-2017 IPR012347 Ferritin-related BV404_RS09135 cffa0877ea5aa5106896ba6dab9ec2bd 259 PIRSF PIRSF020736 2 257 5.9E-93 T 09-03-2017 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 BV404_RS03845 8a35ecbde0b1ec664c0b03e1e6435954 756 Pfam PF07670 Nucleoside recognition 349 440 1.6E-13 T 09-03-2017 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 BV404_RS03845 8a35ecbde0b1ec664c0b03e1e6435954 756 Pfam PF07670 Nucleoside recognition 509 689 8.9E-36 T 09-03-2017 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 BV404_RS03845 8a35ecbde0b1ec664c0b03e1e6435954 756 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 152 2.2E-12 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 BV404_RS03845 8a35ecbde0b1ec664c0b03e1e6435954 756 Pfam PF07664 Ferrous iron transport protein B C terminus 452 504 4.0E-21 T 09-03-2017 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 BV404_RS03845 8a35ecbde0b1ec664c0b03e1e6435954 756 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 9 686 4.9E-178 T 09-03-2017 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 BV404_RS03845 8a35ecbde0b1ec664c0b03e1e6435954 756 Gene3D G3DSA:3.40.50.300 4 168 7.3E-33 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS03845 8a35ecbde0b1ec664c0b03e1e6435954 756 SUPERFAMILY SSF52540 4 172 1.12E-36 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS03845 8a35ecbde0b1ec664c0b03e1e6435954 756 Pfam PF02421 Ferrous iron transport protein B 4 161 1.0E-56 T 09-03-2017 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 BV404_RS09420 e2b6e5b1131587bc4f1b88a74f40d51d 565 Gene3D G3DSA:2.30.38.10 380 455 5.0E-30 T 09-03-2017 BV404_RS09420 e2b6e5b1131587bc4f1b88a74f40d51d 565 Pfam PF13193 AMP-binding enzyme C-terminal domain 470 544 5.8E-18 T 09-03-2017 IPR025110 AMP-binding enzyme C-terminal domain BV404_RS09420 e2b6e5b1131587bc4f1b88a74f40d51d 565 SUPERFAMILY SSF56801 13 553 1.44E-148 T 09-03-2017 BV404_RS09420 e2b6e5b1131587bc4f1b88a74f40d51d 565 Pfam PF00501 AMP-binding enzyme 29 461 1.2E-106 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 BV404_RS09420 e2b6e5b1131587bc4f1b88a74f40d51d 565 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 09-03-2017 IPR020845 AMP-binding, conserved site BV404_RS09420 e2b6e5b1131587bc4f1b88a74f40d51d 565 Gene3D G3DSA:3.40.50.980 217 379 2.7E-40 T 09-03-2017 BV404_RS09420 e2b6e5b1131587bc4f1b88a74f40d51d 565 Gene3D G3DSA:3.40.50.980 24 152 3.4E-40 T 09-03-2017 BV404_RS09420 e2b6e5b1131587bc4f1b88a74f40d51d 565 Gene3D G3DSA:3.40.50.980 185 216 3.4E-40 T 09-03-2017 BV404_RS09420 e2b6e5b1131587bc4f1b88a74f40d51d 565 Gene3D G3DSA:3.30.300.30 456 552 6.6E-28 T 09-03-2017 BV404_RS13220 ee018a8f08a7e67ea8a18eba9643c3e3 237 Pfam PF00175 Oxidoreductase NAD-binding domain 112 215 1.4E-21 T 09-03-2017 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 BV404_RS13220 ee018a8f08a7e67ea8a18eba9643c3e3 237 SUPERFAMILY SSF63380 2 101 8.05E-18 T 09-03-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 BV404_RS13220 ee018a8f08a7e67ea8a18eba9643c3e3 237 Pfam PF00970 Oxidoreductase FAD-binding domain 15 99 2.0E-5 T 09-03-2017 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 BV404_RS13220 ee018a8f08a7e67ea8a18eba9643c3e3 237 Gene3D G3DSA:3.40.50.80 104 235 2.2E-35 T 09-03-2017 BV404_RS13220 ee018a8f08a7e67ea8a18eba9643c3e3 237 Gene3D G3DSA:2.40.30.10 1 101 1.3E-26 T 09-03-2017 BV404_RS13220 ee018a8f08a7e67ea8a18eba9643c3e3 237 SUPERFAMILY SSF52343 104 235 3.4E-33 T 09-03-2017 BV404_RS13220 ee018a8f08a7e67ea8a18eba9643c3e3 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 30 42 2.8E-12 T 09-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 BV404_RS13220 ee018a8f08a7e67ea8a18eba9643c3e3 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 46 53 2.8E-12 T 09-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 BV404_RS13220 ee018a8f08a7e67ea8a18eba9643c3e3 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 136 145 2.8E-12 T 09-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 BV404_RS13220 ee018a8f08a7e67ea8a18eba9643c3e3 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 95 104 2.8E-12 T 09-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 BV404_RS13220 ee018a8f08a7e67ea8a18eba9643c3e3 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 111 130 2.8E-12 T 09-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 BV404_RS10675 de6ccb084eedc057eb73707ef2a92aaf 1297 SMART SM01211 1041 1296 9.7E-159 T 09-03-2017 BV404_RS10675 de6ccb084eedc057eb73707ef2a92aaf 1297 Pfam PF02769 AIR synthase related protein, C-terminal domain 432 589 9.8E-29 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain BV404_RS10675 de6ccb084eedc057eb73707ef2a92aaf 1297 Pfam PF02769 AIR synthase related protein, C-terminal domain 836 966 4.4E-14 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain BV404_RS10675 de6ccb084eedc057eb73707ef2a92aaf 1297 SUPERFAMILY SSF56042 432 615 6.73E-54 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain BV404_RS10675 de6ccb084eedc057eb73707ef2a92aaf 1297 SUPERFAMILY SSF56042 826 1035 6.28E-54 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain BV404_RS10675 de6ccb084eedc057eb73707ef2a92aaf 1297 SUPERFAMILY SSF55326 619 816 8.37E-70 T 09-03-2017 BV404_RS10675 de6ccb084eedc057eb73707ef2a92aaf 1297 SUPERFAMILY SSF52317 1037 1295 3.67E-99 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like BV404_RS10675 de6ccb084eedc057eb73707ef2a92aaf 1297 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1297 21.343 T 09-03-2017 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BV404_RS10675 de6ccb084eedc057eb73707ef2a92aaf 1297 SUPERFAMILY SSF82697 1 151 2.82E-51 T 09-03-2017 BV404_RS10675 de6ccb084eedc057eb73707ef2a92aaf 1297 SUPERFAMILY SSF55326 221 428 1.15E-66 T 09-03-2017 BV404_RS10675 de6ccb084eedc057eb73707ef2a92aaf 1297 Gene3D G3DSA:3.30.1330.10 646 810 1.2E-15 T 09-03-2017 IPR016188 PurM-like, N-terminal domain BV404_RS10675 de6ccb084eedc057eb73707ef2a92aaf 1297 Gene3D G3DSA:3.30.1330.10 211 422 3.1E-40 T 09-03-2017 IPR016188 PurM-like, N-terminal domain BV404_RS10675 de6ccb084eedc057eb73707ef2a92aaf 1297 SUPERFAMILY SSF109736 156 220 2.62E-21 T 09-03-2017 BV404_RS10675 de6ccb084eedc057eb73707ef2a92aaf 1297 Gene3D G3DSA:3.40.50.880 1042 1266 1.3E-13 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like BV404_RS10675 de6ccb084eedc057eb73707ef2a92aaf 1297 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1295 0.0 T 09-03-2017 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BV404_RS10675 de6ccb084eedc057eb73707ef2a92aaf 1297 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1041 1294 2.1E-106 T 09-03-2017 BV404_RS09980 7bedd4ba71c8d57cf9223322ee4d2ce6 304 SUPERFAMILY SSF51735 1 301 5.22E-41 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS09980 7bedd4ba71c8d57cf9223322ee4d2ce6 304 Gene3D G3DSA:3.40.50.720 1 201 1.1E-22 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS09980 7bedd4ba71c8d57cf9223322ee4d2ce6 304 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 296 2.5E-102 T 09-03-2017 IPR010099 Epimerase family protein SDR39U1 BV404_RS09980 7bedd4ba71c8d57cf9223322ee4d2ce6 304 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 226 1.9E-23 T 09-03-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 BV404_RS09980 7bedd4ba71c8d57cf9223322ee4d2ce6 304 Gene3D G3DSA:3.90.25.10 202 290 3.8E-7 T 09-03-2017 BV404_RS09980 7bedd4ba71c8d57cf9223322ee4d2ce6 304 Pfam PF08338 Domain of unknown function (DUF1731) 253 299 5.5E-17 T 09-03-2017 IPR013549 Domain of unknown function DUF1731 BV404_RS12135 f39472bda580a4d8eba3a74fb149b28d 451 SUPERFAMILY SSF158791 2 129 5.75E-19 T 09-03-2017 BV404_RS12135 f39472bda580a4d8eba3a74fb149b28d 451 SMART SM00116 204 252 0.58 T 09-03-2017 IPR000644 CBS domain BV404_RS12135 f39472bda580a4d8eba3a74fb149b28d 451 SMART SM00116 140 193 2.0 T 09-03-2017 IPR000644 CBS domain BV404_RS12135 f39472bda580a4d8eba3a74fb149b28d 451 TIGRFAM TIGR00400 mgtE: magnesium transporter 5 446 4.7E-107 T 09-03-2017 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 BV404_RS12135 f39472bda580a4d8eba3a74fb149b28d 451 Gene3D G3DSA:1.25.60.10 3 125 8.5E-16 T 09-03-2017 BV404_RS12135 f39472bda580a4d8eba3a74fb149b28d 451 Gene3D G3DSA:3.10.580.10 126 258 1.7E-19 T 09-03-2017 BV404_RS12135 f39472bda580a4d8eba3a74fb149b28d 451 Pfam PF01769 Divalent cation transporter 318 439 9.8E-27 T 09-03-2017 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 BV404_RS12135 f39472bda580a4d8eba3a74fb149b28d 451 SUPERFAMILY SSF161093 279 445 4.58E-48 T 09-03-2017 BV404_RS12135 f39472bda580a4d8eba3a74fb149b28d 451 Pfam PF00571 CBS domain 133 191 5.0E-8 T 09-03-2017 IPR000644 CBS domain BV404_RS12135 f39472bda580a4d8eba3a74fb149b28d 451 SMART SM00924 24 133 1.1E-13 T 09-03-2017 IPR006668 Magnesium transporter, MgtE intracellular domain BV404_RS12135 f39472bda580a4d8eba3a74fb149b28d 451 Gene3D G3DSA:1.10.357.20 275 446 1.6E-53 T 09-03-2017 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 BV404_RS12135 f39472bda580a4d8eba3a74fb149b28d 451 SUPERFAMILY SSF54631 132 263 1.39E-26 T 09-03-2017 BV404_RS12135 f39472bda580a4d8eba3a74fb149b28d 451 Pfam PF03448 MgtE intracellular N domain 41 130 8.6E-16 T 09-03-2017 IPR006668 Magnesium transporter, MgtE intracellular domain BV404_RS03495 3db85aa75cee560c2f993903feee9394 351 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 4 350 2.2E-183 T 09-03-2017 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 BV404_RS03495 3db85aa75cee560c2f993903feee9394 351 Gene3D G3DSA:3.30.428.10 178 349 5.1E-76 T 09-03-2017 IPR011146 HIT-like domain GO:0003824 BV404_RS03495 3db85aa75cee560c2f993903feee9394 351 Gene3D G3DSA:3.30.428.10 46 177 7.3E-56 T 09-03-2017 IPR011146 HIT-like domain GO:0003824 BV404_RS03495 3db85aa75cee560c2f993903feee9394 351 SUPERFAMILY SSF54197 6 179 4.99E-72 T 09-03-2017 IPR011146 HIT-like domain GO:0003824 BV404_RS03495 3db85aa75cee560c2f993903feee9394 351 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 6 178 6.6E-67 T 09-03-2017 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 BV404_RS03495 3db85aa75cee560c2f993903feee9394 351 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 153 170 - T 09-03-2017 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 BV404_RS03495 3db85aa75cee560c2f993903feee9394 351 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 186 349 2.3E-65 T 09-03-2017 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 BV404_RS03495 3db85aa75cee560c2f993903feee9394 351 SUPERFAMILY SSF54197 181 349 1.57E-54 T 09-03-2017 IPR011146 HIT-like domain GO:0003824 BV404_RS03495 3db85aa75cee560c2f993903feee9394 351 PIRSF PIRSF000808 3 345 4.0E-123 T 09-03-2017 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 BV404_RS00495 040230218889901400d278b0476092b7 320 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 301 1.1E-130 T 09-03-2017 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 BV404_RS00495 040230218889901400d278b0476092b7 320 PIRSF PIRSF000532 1 320 8.3E-129 T 09-03-2017 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 BV404_RS00495 040230218889901400d278b0476092b7 320 Gene3D G3DSA:3.40.50.450 2 215 3.4E-76 T 09-03-2017 BV404_RS00495 040230218889901400d278b0476092b7 320 SUPERFAMILY SSF53784 3 312 1.83E-115 T 09-03-2017 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BV404_RS00495 040230218889901400d278b0476092b7 320 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 09-03-2017 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BV404_RS00495 040230218889901400d278b0476092b7 320 Pfam PF00365 Phosphofructokinase 4 276 1.1E-110 T 09-03-2017 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BV404_RS00495 040230218889901400d278b0476092b7 320 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 320 47.461 T 09-03-2017 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 BV404_RS00495 040230218889901400d278b0476092b7 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 1.4E-83 T 09-03-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BV404_RS00495 040230218889901400d278b0476092b7 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 1.4E-83 T 09-03-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BV404_RS00495 040230218889901400d278b0476092b7 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 1.4E-83 T 09-03-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BV404_RS00495 040230218889901400d278b0476092b7 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 1.4E-83 T 09-03-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BV404_RS00495 040230218889901400d278b0476092b7 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 1.4E-83 T 09-03-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BV404_RS00495 040230218889901400d278b0476092b7 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 1.4E-83 T 09-03-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BV404_RS00495 040230218889901400d278b0476092b7 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 1.4E-83 T 09-03-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BV404_RS00495 040230218889901400d278b0476092b7 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 1.4E-83 T 09-03-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BV404_RS00495 040230218889901400d278b0476092b7 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 1.4E-83 T 09-03-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BV404_RS06195 af5c929172947b7a689611f9f1c705d0 316 Gene3D G3DSA:1.10.8.300 198 312 2.7E-38 T 09-03-2017 BV404_RS06195 af5c929172947b7a689611f9f1c705d0 316 Gene3D G3DSA:3.40.50.300 9 176 7.6E-42 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS06195 af5c929172947b7a689611f9f1c705d0 316 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 28 160 2.4E-61 T 09-03-2017 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 BV404_RS06195 af5c929172947b7a689611f9f1c705d0 316 SUPERFAMILY SSF52540 6 290 7.62E-39 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS06195 af5c929172947b7a689611f9f1c705d0 316 PIRSF PIRSF002849 1 316 2.3E-121 T 09-03-2017 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted BV404_RS00920 5794a0d9639ca62a46ba34267b9cedf0 815 SMART SM00316 650 733 8.3E-14 T 09-03-2017 IPR022967 RNA-binding domain, S1 BV404_RS00920 5794a0d9639ca62a46ba34267b9cedf0 815 Pfam PF08461 Ribonuclease R winged-helix domain 26 88 4.7E-12 T 09-03-2017 IPR013668 Ribonuclease R winged-helix domain BV404_RS00920 5794a0d9639ca62a46ba34267b9cedf0 815 ProSitePatterns PS01175 Ribonuclease II family signature. 562 586 - T 09-03-2017 IPR022966 Ribonuclease II/R, conserved site BV404_RS00920 5794a0d9639ca62a46ba34267b9cedf0 815 SMART SM00955 267 595 2.0E-186 T 09-03-2017 BV404_RS00920 5794a0d9639ca62a46ba34267b9cedf0 815 Pfam PF08206 Ribonuclease B OB domain 91 151 5.0E-21 T 09-03-2017 IPR013223 Ribonuclease B, N-terminal OB domain BV404_RS00920 5794a0d9639ca62a46ba34267b9cedf0 815 Pfam PF00773 RNB domain 267 594 5.3E-107 T 09-03-2017 BV404_RS00920 5794a0d9639ca62a46ba34267b9cedf0 815 Pfam PF00575 S1 RNA binding domain 650 731 4.1E-13 T 09-03-2017 IPR003029 S1 domain GO:0003676 BV404_RS00920 5794a0d9639ca62a46ba34267b9cedf0 815 SUPERFAMILY SSF50249 145 242 6.28E-15 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS00920 5794a0d9639ca62a46ba34267b9cedf0 815 Gene3D G3DSA:2.40.50.140 652 736 1.3E-21 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS00920 5794a0d9639ca62a46ba34267b9cedf0 815 TIGRFAM TIGR02063 RNase_R: ribonuclease R 23 734 2.9E-275 T 09-03-2017 IPR011805 Ribonuclease R GO:0003723|GO:0004518 BV404_RS00920 5794a0d9639ca62a46ba34267b9cedf0 815 SUPERFAMILY SSF50249 227 650 4.23E-144 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS00920 5794a0d9639ca62a46ba34267b9cedf0 815 Hamap MF_01895 Ribonuclease R [rnr]. 42 733 59.881 T 09-03-2017 IPR011805 Ribonuclease R GO:0003723|GO:0004518 BV404_RS00920 5794a0d9639ca62a46ba34267b9cedf0 815 SMART SM00357 90 152 1.1E-12 T 09-03-2017 IPR011129 Cold shock protein GO:0003676 BV404_RS00920 5794a0d9639ca62a46ba34267b9cedf0 815 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 71 733 3.4E-257 T 09-03-2017 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 BV404_RS00920 5794a0d9639ca62a46ba34267b9cedf0 815 SUPERFAMILY SSF50249 71 154 4.33E-16 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS00920 5794a0d9639ca62a46ba34267b9cedf0 815 SUPERFAMILY SSF50249 651 742 4.62E-22 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS00370 c459ac6ff2eae1b9dc6a25088a0cb58a 90 SUPERFAMILY SSF63562 1 78 8.89E-26 T 09-03-2017 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 BV404_RS00370 c459ac6ff2eae1b9dc6a25088a0cb58a 90 Pfam PF01192 RNA polymerase Rpb6 10 60 3.1E-18 T 09-03-2017 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 BV404_RS00370 c459ac6ff2eae1b9dc6a25088a0cb58a 90 Gene3D G3DSA:3.90.940.10 1 77 4.8E-17 T 09-03-2017 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 BV404_RS00370 c459ac6ff2eae1b9dc6a25088a0cb58a 90 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 1.8E-29 T 09-03-2017 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BV404_RS00370 c459ac6ff2eae1b9dc6a25088a0cb58a 90 SMART SM01409 8 61 1.3E-16 T 09-03-2017 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 BV404_RS00370 c459ac6ff2eae1b9dc6a25088a0cb58a 90 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.837 T 09-03-2017 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BV404_RS14435 561a53f4aa3dadf08c24a8d0135daa6e 154 Pfam PF13404 AsnC-type helix-turn-helix domain 8 49 9.4E-15 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 BV404_RS14435 561a53f4aa3dadf08c24a8d0135daa6e 154 Gene3D G3DSA:3.30.70.920 71 145 1.5E-22 T 09-03-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BV404_RS14435 561a53f4aa3dadf08c24a8d0135daa6e 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 1.2E-10 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 BV404_RS14435 561a53f4aa3dadf08c24a8d0135daa6e 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 1.2E-10 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 BV404_RS14435 561a53f4aa3dadf08c24a8d0135daa6e 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 1.2E-10 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 BV404_RS14435 561a53f4aa3dadf08c24a8d0135daa6e 154 SUPERFAMILY SSF46785 7 68 6.13E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS14435 561a53f4aa3dadf08c24a8d0135daa6e 154 SUPERFAMILY SSF54909 69 154 5.09E-19 T 09-03-2017 IPR011008 Dimeric alpha-beta barrel BV404_RS14435 561a53f4aa3dadf08c24a8d0135daa6e 154 Pfam PF01037 Lrp/AsnC ligand binding domain 75 145 2.4E-16 T 09-03-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BV404_RS14435 561a53f4aa3dadf08c24a8d0135daa6e 154 Gene3D G3DSA:1.10.10.10 4 59 7.0E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS14435 561a53f4aa3dadf08c24a8d0135daa6e 154 SMART SM00344 8 115 4.6E-41 T 09-03-2017 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 BV404_RS14740 97e8bd8e6985855a814a20c5040d7627 165 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 109 119 - T 09-03-2017 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311|GO:0016791 BV404_RS14740 97e8bd8e6985855a814a20c5040d7627 165 Pfam PF05706 Cyclin-dependent kinase inhibitor 3 (CDKN3) 32 129 1.9E-9 T 09-03-2017 IPR022778 CDKN3 domain GO:0004721|GO:0004725 KEGG: 04660+3.1.3.16 BV404_RS14740 97e8bd8e6985855a814a20c5040d7627 165 Gene3D G3DSA:3.90.190.10 14 161 5.5E-35 T 09-03-2017 IPR029021 Protein-tyrosine phosphatase-like BV404_RS14740 97e8bd8e6985855a814a20c5040d7627 165 SUPERFAMILY SSF52799 14 160 8.71E-32 T 09-03-2017 IPR029021 Protein-tyrosine phosphatase-like BV404_RS06980 1fedf63e3b53d0522a81d694bb1ea43a 598 SUPERFAMILY SSF63882 197 368 5.89E-47 T 09-03-2017 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 BV404_RS06980 1fedf63e3b53d0522a81d694bb1ea43a 598 Gene3D G3DSA:3.40.980.10 356 522 3.9E-64 T 09-03-2017 IPR001453 MoaB/Mog domain BV404_RS06980 1fedf63e3b53d0522a81d694bb1ea43a 598 SUPERFAMILY SSF63867 518 596 4.84E-21 T 09-03-2017 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 BV404_RS06980 1fedf63e3b53d0522a81d694bb1ea43a 598 Pfam PF03454 MoeA C-terminal region (domain IV) 523 594 9.5E-20 T 09-03-2017 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 BV404_RS06980 1fedf63e3b53d0522a81d694bb1ea43a 598 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 368 505 4.5E-32 T 09-03-2017 IPR001453 MoaB/Mog domain BV404_RS06980 1fedf63e3b53d0522a81d694bb1ea43a 598 PIRSF PIRSF036618 1 598 0.0 T 09-03-2017 IPR012182 Bifunctional molybdenum cofactor biosynthesis MobB/MoeA BV404_RS06980 1fedf63e3b53d0522a81d694bb1ea43a 598 Gene3D G3DSA:3.40.50.300 11 172 9.9E-61 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS06980 1fedf63e3b53d0522a81d694bb1ea43a 598 Gene3D G3DSA:2.170.190.11 242 333 6.2E-29 T 09-03-2017 BV404_RS06980 1fedf63e3b53d0522a81d694bb1ea43a 598 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 14 169 9.7E-43 T 09-03-2017 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 BV404_RS06980 1fedf63e3b53d0522a81d694bb1ea43a 598 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 14 146 2.0E-47 T 09-03-2017 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 BV404_RS06980 1fedf63e3b53d0522a81d694bb1ea43a 598 SMART SM00852 372 509 7.1E-40 T 09-03-2017 IPR001453 MoaB/Mog domain BV404_RS06980 1fedf63e3b53d0522a81d694bb1ea43a 598 SUPERFAMILY SSF53218 369 515 3.93E-44 T 09-03-2017 IPR001453 MoaB/Mog domain BV404_RS06980 1fedf63e3b53d0522a81d694bb1ea43a 598 Pfam PF03453 MoeA N-terminal region (domain I and II) 200 359 1.4E-32 T 09-03-2017 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 BV404_RS06980 1fedf63e3b53d0522a81d694bb1ea43a 598 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 445 478 - T 09-03-2017 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 BV404_RS06980 1fedf63e3b53d0522a81d694bb1ea43a 598 Pfam PF00994 Probable molybdopterin binding domain 374 509 2.2E-27 T 09-03-2017 IPR001453 MoaB/Mog domain BV404_RS06980 1fedf63e3b53d0522a81d694bb1ea43a 598 Gene3D G3DSA:3.90.105.10 219 241 7.4E-14 T 09-03-2017 BV404_RS06980 1fedf63e3b53d0522a81d694bb1ea43a 598 Gene3D G3DSA:3.90.105.10 334 355 7.4E-14 T 09-03-2017 BV404_RS06980 1fedf63e3b53d0522a81d694bb1ea43a 598 SUPERFAMILY SSF52540 12 172 8.57E-24 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS06980 1fedf63e3b53d0522a81d694bb1ea43a 598 Gene3D G3DSA:2.40.340.10 523 592 1.6E-27 T 09-03-2017 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 BV404_RS08075 41bf3557eeb28b33cd04a30cf8e14ad6 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 327 1.4E-114 T 09-03-2017 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 BV404_RS08075 41bf3557eeb28b33cd04a30cf8e14ad6 327 SUPERFAMILY SSF46589 13 99 1.73E-22 T 09-03-2017 IPR010978 tRNA-binding arm GO:0000166 BV404_RS08075 41bf3557eeb28b33cd04a30cf8e14ad6 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 2.5E-25 T 09-03-2017 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 BV404_RS08075 41bf3557eeb28b33cd04a30cf8e14ad6 327 SUPERFAMILY SSF55681 92 327 8.71E-83 T 09-03-2017 BV404_RS08075 41bf3557eeb28b33cd04a30cf8e14ad6 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 49.414 T 09-03-2017 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 BV404_RS08075 41bf3557eeb28b33cd04a30cf8e14ad6 327 Gene3D G3DSA:3.30.930.10 10 327 3.2E-135 T 09-03-2017 BV404_RS08075 41bf3557eeb28b33cd04a30cf8e14ad6 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 2.9E-107 T 09-03-2017 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 BV404_RS05440 96ebf894bbbfa27f7cf96b580525fd53 398 Hamap MF_00020 Acetate kinase [ackA]. 1 398 191.6 T 09-03-2017 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BV404_RS05440 96ebf894bbbfa27f7cf96b580525fd53 398 SUPERFAMILY SSF53067 155 396 2.16E-88 T 09-03-2017 BV404_RS05440 96ebf894bbbfa27f7cf96b580525fd53 398 PIRSF PIRSF000722 1 398 4.6E-150 T 09-03-2017 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BV404_RS05440 96ebf894bbbfa27f7cf96b580525fd53 398 Gene3D G3DSA:3.30.420.40 204 395 2.5E-77 T 09-03-2017 BV404_RS05440 96ebf894bbbfa27f7cf96b580525fd53 398 PRINTS PR00471 Acetate kinase family signature 377 389 8.2E-46 T 09-03-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BV404_RS05440 96ebf894bbbfa27f7cf96b580525fd53 398 PRINTS PR00471 Acetate kinase family signature 321 337 8.2E-46 T 09-03-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BV404_RS05440 96ebf894bbbfa27f7cf96b580525fd53 398 PRINTS PR00471 Acetate kinase family signature 298 311 8.2E-46 T 09-03-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BV404_RS05440 96ebf894bbbfa27f7cf96b580525fd53 398 PRINTS PR00471 Acetate kinase family signature 172 185 8.2E-46 T 09-03-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BV404_RS05440 96ebf894bbbfa27f7cf96b580525fd53 398 PRINTS PR00471 Acetate kinase family signature 5 16 8.2E-46 T 09-03-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BV404_RS05440 96ebf894bbbfa27f7cf96b580525fd53 398 PRINTS PR00471 Acetate kinase family signature 202 223 8.2E-46 T 09-03-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BV404_RS05440 96ebf894bbbfa27f7cf96b580525fd53 398 TIGRFAM TIGR00016 ackA: acetate kinase 2 396 2.4E-175 T 09-03-2017 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BV404_RS05440 96ebf894bbbfa27f7cf96b580525fd53 398 Gene3D G3DSA:3.30.420.40 90 203 2.2E-10 T 09-03-2017 BV404_RS05440 96ebf894bbbfa27f7cf96b580525fd53 398 SUPERFAMILY SSF53067 3 195 2.14E-65 T 09-03-2017 BV404_RS05440 96ebf894bbbfa27f7cf96b580525fd53 398 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 09-03-2017 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BV404_RS05440 96ebf894bbbfa27f7cf96b580525fd53 398 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 202 219 - T 09-03-2017 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BV404_RS05440 96ebf894bbbfa27f7cf96b580525fd53 398 Pfam PF00871 Acetokinase family 5 390 1.3E-168 T 09-03-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BV404_RS04950 4b705cf32610edcadf5cd4b53fb524cc 494 Gene3D G3DSA:3.40.50.300 2 211 5.2E-81 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS04950 4b705cf32610edcadf5cd4b53fb524cc 494 SMART SM00490 257 338 1.1E-31 T 09-03-2017 IPR001650 Helicase, C-terminal BV404_RS04950 4b705cf32610edcadf5cd4b53fb524cc 494 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 09-03-2017 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BV404_RS04950 4b705cf32610edcadf5cd4b53fb524cc 494 SMART SM00487 20 219 5.0E-59 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain BV404_RS04950 4b705cf32610edcadf5cd4b53fb524cc 494 Pfam PF00271 Helicase conserved C-terminal domain 232 338 2.1E-26 T 09-03-2017 IPR001650 Helicase, C-terminal BV404_RS04950 4b705cf32610edcadf5cd4b53fb524cc 494 Gene3D G3DSA:3.40.50.300 212 375 9.7E-50 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS04950 4b705cf32610edcadf5cd4b53fb524cc 494 SUPERFAMILY SSF52540 73 353 1.03E-73 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS04950 4b705cf32610edcadf5cd4b53fb524cc 494 Pfam PF00270 DEAD/DEAH box helicase 26 193 2.8E-46 T 09-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BV404_RS04950 4b705cf32610edcadf5cd4b53fb524cc 494 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 477 50.66 T 09-03-2017 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 BV404_RS04420 26d0efd291949cd2a13a2a4a37e0e6dd 194 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 80 175 3.0E-35 T 09-03-2017 BV404_RS04420 26d0efd291949cd2a13a2a4a37e0e6dd 194 SUPERFAMILY SSF109604 4 185 4.4E-43 T 09-03-2017 BV404_RS04420 26d0efd291949cd2a13a2a4a37e0e6dd 194 SMART SM00471 26 151 3.1E-6 T 09-03-2017 IPR003607 HD/PDEase domain BV404_RS04420 26d0efd291949cd2a13a2a4a37e0e6dd 194 Pfam PF13023 HD domain 11 160 6.7E-17 T 09-03-2017 IPR006674 HD domain BV404_RS04420 26d0efd291949cd2a13a2a4a37e0e6dd 194 Gene3D G3DSA:1.10.3210.10 2 193 6.2E-47 T 09-03-2017 IPR006674 HD domain BV404_RS04420 26d0efd291949cd2a13a2a4a37e0e6dd 194 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 3 194 45.916 T 09-03-2017 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 BV404_RS02110 10a830d17f8f2eeaec20106deb8876cd 574 Pfam PF02927 Cellulase N-terminal ig-like domain 4 84 1.1E-7 T 09-03-2017 IPR004197 Cellulase, Ig-like domain GO:0005975|GO:0008810 BV404_RS02110 10a830d17f8f2eeaec20106deb8876cd 574 Gene3D G3DSA:2.60.40.10 4 92 6.7E-13 T 09-03-2017 IPR013783 Immunoglobulin-like fold BV404_RS02110 10a830d17f8f2eeaec20106deb8876cd 574 SUPERFAMILY SSF48208 83 566 2.85E-87 T 09-03-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 BV404_RS02110 10a830d17f8f2eeaec20106deb8876cd 574 SUPERFAMILY SSF81296 2 90 3.01E-12 T 09-03-2017 IPR014756 Immunoglobulin E-set BV404_RS02110 10a830d17f8f2eeaec20106deb8876cd 574 Pfam PF00759 Glycosyl hydrolase family 9 100 504 1.3E-21 T 09-03-2017 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 BV404_RS02110 10a830d17f8f2eeaec20106deb8876cd 574 Gene3D G3DSA:1.50.10.10 99 561 4.2E-65 T 09-03-2017 IPR012341 Six-hairpin glycosidase GO:0003824 BV404_RS09415 def1a62259bc8715589aac032a50be59 371 Hamap MF_01899 Ribonuclease D [rnd]. 3 371 43.42 T 09-03-2017 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 BV404_RS09415 def1a62259bc8715589aac032a50be59 371 Gene3D G3DSA:3.30.420.10 2 177 3.4E-15 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 BV404_RS09415 def1a62259bc8715589aac032a50be59 371 SUPERFAMILY SSF47819 295 370 3.01E-21 T 09-03-2017 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 BV404_RS09415 def1a62259bc8715589aac032a50be59 371 SUPERFAMILY SSF53098 2 209 2.61E-67 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 BV404_RS09415 def1a62259bc8715589aac032a50be59 371 Pfam PF01612 3'-5' exonuclease 3 170 3.7E-39 T 09-03-2017 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 BV404_RS09415 def1a62259bc8715589aac032a50be59 371 SMART SM00474 3 171 9.7E-40 T 09-03-2017 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 BV404_RS09415 def1a62259bc8715589aac032a50be59 371 Pfam PF00570 HRDC domain 213 279 2.3E-8 T 09-03-2017 IPR002121 HRDC domain GO:0003676|GO:0005622 BV404_RS09415 def1a62259bc8715589aac032a50be59 371 TIGRFAM TIGR01388 rnd: ribonuclease D 5 370 2.5E-153 T 09-03-2017 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 BV404_RS09415 def1a62259bc8715589aac032a50be59 371 SUPERFAMILY SSF47819 193 301 3.14E-23 T 09-03-2017 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 BV404_RS03335 c68eaf96f8a8755c63a852ee8be9169e 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 45.045 T 09-03-2017 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 BV404_RS03335 c68eaf96f8a8755c63a852ee8be9169e 363 Gene3D G3DSA:3.40.50.300 201 267 1.7E-44 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS03335 c68eaf96f8a8755c63a852ee8be9169e 363 Gene3D G3DSA:3.40.50.300 4 131 1.7E-44 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS03335 c68eaf96f8a8755c63a852ee8be9169e 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.9E-34 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 BV404_RS03335 c68eaf96f8a8755c63a852ee8be9169e 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.9E-34 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 BV404_RS03335 c68eaf96f8a8755c63a852ee8be9169e 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.9E-34 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 BV404_RS03335 c68eaf96f8a8755c63a852ee8be9169e 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.9E-34 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 BV404_RS03335 c68eaf96f8a8755c63a852ee8be9169e 363 Gene3D G3DSA:3.10.20.30 268 363 2.4E-50 T 09-03-2017 IPR012675 Beta-grasp domain BV404_RS03335 c68eaf96f8a8755c63a852ee8be9169e 363 PIRSF PIRSF006641 1 363 8.2E-157 T 09-03-2017 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 BV404_RS03335 c68eaf96f8a8755c63a852ee8be9169e 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 4.5E-168 T 09-03-2017 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 BV404_RS03335 c68eaf96f8a8755c63a852ee8be9169e 363 SUPERFAMILY SSF81271 279 360 1.2E-36 T 09-03-2017 IPR012676 TGS-like KEGG: 00970+6.1.1.3 BV404_RS03335 c68eaf96f8a8755c63a852ee8be9169e 363 SUPERFAMILY SSF52540 3 301 3.94E-83 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS03335 c68eaf96f8a8755c63a852ee8be9169e 363 Pfam PF01926 50S ribosome-binding GTPase 5 121 1.1E-21 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 BV404_RS03335 c68eaf96f8a8755c63a852ee8be9169e 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 2.6E-39 T 09-03-2017 IPR013029 Domain of unknown function DUF933 BV404_RS03335 c68eaf96f8a8755c63a852ee8be9169e 363 Gene3D G3DSA:1.10.150.300 132 200 2.0E-25 T 09-03-2017 IPR023192 TGS-like domain BV404_RS12190 27e9af91e93ddf940370a72c80b94f06 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 7.8E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS12190 27e9af91e93ddf940370a72c80b94f06 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 7.8E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS12190 27e9af91e93ddf940370a72c80b94f06 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 7.8E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS12190 27e9af91e93ddf940370a72c80b94f06 299 Pfam PF03466 LysR substrate binding domain 96 270 1.4E-18 T 09-03-2017 IPR005119 LysR, substrate-binding BV404_RS12190 27e9af91e93ddf940370a72c80b94f06 299 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 4 296 8.8E-106 T 09-03-2017 IPR017685 HTH-type transcriptional regulator ArgP BV404_RS12190 27e9af91e93ddf940370a72c80b94f06 299 SUPERFAMILY SSF46785 4 112 3.69E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS12190 27e9af91e93ddf940370a72c80b94f06 299 SUPERFAMILY SSF53850 95 294 4.16E-23 T 09-03-2017 BV404_RS12190 27e9af91e93ddf940370a72c80b94f06 299 Gene3D G3DSA:1.10.10.10 4 84 1.5E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS12190 27e9af91e93ddf940370a72c80b94f06 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 2.9E-16 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS12190 27e9af91e93ddf940370a72c80b94f06 299 Gene3D G3DSA:3.40.190.10 191 257 5.8E-5 T 09-03-2017 BV404_RS12190 27e9af91e93ddf940370a72c80b94f06 299 Gene3D G3DSA:3.40.190.10 93 190 4.1E-39 T 09-03-2017 BV404_RS07340 f9aca5f5a99c8c6d406225763a05785e 868 SUPERFAMILY SSF63737 3 192 5.62E-45 T 09-03-2017 BV404_RS07340 f9aca5f5a99c8c6d406225763a05785e 868 Gene3D G3DSA:1.25.50.10 545 867 3.1E-120 T 09-03-2017 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal BV404_RS07340 f9aca5f5a99c8c6d406225763a05785e 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 312 324 4.3E-9 T 09-03-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BV404_RS07340 f9aca5f5a99c8c6d406225763a05785e 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 175 190 4.3E-9 T 09-03-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BV404_RS07340 f9aca5f5a99c8c6d406225763a05785e 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 293 308 4.3E-9 T 09-03-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BV404_RS07340 f9aca5f5a99c8c6d406225763a05785e 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 257 267 4.3E-9 T 09-03-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BV404_RS07340 f9aca5f5a99c8c6d406225763a05785e 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 125 140 4.3E-9 T 09-03-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BV404_RS07340 f9aca5f5a99c8c6d406225763a05785e 868 Pfam PF11940 Domain of unknown function (DUF3458) 457 824 1.5E-135 T 09-03-2017 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal BV404_RS07340 f9aca5f5a99c8c6d406225763a05785e 868 Pfam PF01433 Peptidase family M1 72 383 2.2E-68 T 09-03-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BV404_RS07340 f9aca5f5a99c8c6d406225763a05785e 868 SUPERFAMILY SSF55486 203 449 1.39E-74 T 09-03-2017 BV404_RS07340 f9aca5f5a99c8c6d406225763a05785e 868 Gene3D G3DSA:1.10.390.10 307 450 1.2E-32 T 09-03-2017 BV404_RS07340 f9aca5f5a99c8c6d406225763a05785e 868 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 866 0.0 T 09-03-2017 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 BV404_RS07700 05ee7301efcd1a5593cb30630c2978bf 724 Gene3D G3DSA:1.10.520.10 702 723 2.3E-55 T 09-03-2017 BV404_RS07700 05ee7301efcd1a5593cb30630c2978bf 724 Gene3D G3DSA:1.10.520.10 434 578 2.3E-55 T 09-03-2017 BV404_RS07700 05ee7301efcd1a5593cb30630c2978bf 724 Gene3D G3DSA:1.10.520.10 47 201 5.3E-75 T 09-03-2017 BV404_RS07700 05ee7301efcd1a5593cb30630c2978bf 724 Gene3D G3DSA:1.10.520.10 239 251 5.3E-75 T 09-03-2017 BV404_RS07700 05ee7301efcd1a5593cb30630c2978bf 724 Gene3D G3DSA:1.10.420.10 310 409 2.7E-46 T 09-03-2017 BV404_RS07700 05ee7301efcd1a5593cb30630c2978bf 724 Gene3D G3DSA:1.10.420.10 252 274 2.7E-46 T 09-03-2017 BV404_RS07700 05ee7301efcd1a5593cb30630c2978bf 724 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 11 724 0.0 T 09-03-2017 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 BV404_RS07700 05ee7301efcd1a5593cb30630c2978bf 724 Pfam PF00141 Peroxidase 406 698 7.2E-35 T 09-03-2017 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 BV404_RS07700 05ee7301efcd1a5593cb30630c2978bf 724 Pfam PF00141 Peroxidase 69 397 4.3E-50 T 09-03-2017 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 BV404_RS07700 05ee7301efcd1a5593cb30630c2978bf 724 PRINTS PR00458 Haem peroxidase superfamily signature 318 333 5.1E-18 T 09-03-2017 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 BV404_RS07700 05ee7301efcd1a5593cb30630c2978bf 724 PRINTS PR00458 Haem peroxidase superfamily signature 150 167 5.1E-18 T 09-03-2017 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 BV404_RS07700 05ee7301efcd1a5593cb30630c2978bf 724 PRINTS PR00458 Haem peroxidase superfamily signature 90 104 5.1E-18 T 09-03-2017 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 BV404_RS07700 05ee7301efcd1a5593cb30630c2978bf 724 PRINTS PR00458 Haem peroxidase superfamily signature 259 274 5.1E-18 T 09-03-2017 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 BV404_RS07700 05ee7301efcd1a5593cb30630c2978bf 724 PRINTS PR00458 Haem peroxidase superfamily signature 168 180 5.1E-18 T 09-03-2017 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 BV404_RS07700 05ee7301efcd1a5593cb30630c2978bf 724 ProSitePatterns PS00436 Peroxidases active site signature. 90 101 - T 09-03-2017 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 BV404_RS07700 05ee7301efcd1a5593cb30630c2978bf 724 Gene3D G3DSA:1.10.420.10 579 699 7.3E-45 T 09-03-2017 BV404_RS07700 05ee7301efcd1a5593cb30630c2978bf 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 52 65 8.8E-54 T 09-03-2017 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 BV404_RS07700 05ee7301efcd1a5593cb30630c2978bf 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 67 92 8.8E-54 T 09-03-2017 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 BV404_RS07700 05ee7301efcd1a5593cb30630c2978bf 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 26 48 8.8E-54 T 09-03-2017 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 BV404_RS07700 05ee7301efcd1a5593cb30630c2978bf 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 267 290 8.8E-54 T 09-03-2017 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 BV404_RS07700 05ee7301efcd1a5593cb30630c2978bf 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 478 504 8.8E-54 T 09-03-2017 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 BV404_RS07700 05ee7301efcd1a5593cb30630c2978bf 724 SUPERFAMILY SSF48113 432 723 7.81E-112 T 09-03-2017 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 BV404_RS07700 05ee7301efcd1a5593cb30630c2978bf 724 SUPERFAMILY SSF48113 17 431 8.84E-152 T 09-03-2017 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 BV404_RS07700 05ee7301efcd1a5593cb30630c2978bf 724 Hamap MF_01961 Catalase-peroxidase [katG]. 7 724 39.865 T 09-03-2017 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 BV404_RS03240 e85fc1fc55e737039dbdd1309c829ee9 379 Gene3D G3DSA:1.20.1330.10 281 334 5.2E-61 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BV404_RS03240 e85fc1fc55e737039dbdd1309c829ee9 379 Gene3D G3DSA:1.20.1330.10 54 171 5.2E-61 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BV404_RS03240 e85fc1fc55e737039dbdd1309c829ee9 379 PRINTS PR00207 Flagellin signature 76 95 4.7E-26 T 09-03-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BV404_RS03240 e85fc1fc55e737039dbdd1309c829ee9 379 PRINTS PR00207 Flagellin signature 37 54 4.7E-26 T 09-03-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BV404_RS03240 e85fc1fc55e737039dbdd1309c829ee9 379 PRINTS PR00207 Flagellin signature 111 134 4.7E-26 T 09-03-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BV404_RS03240 e85fc1fc55e737039dbdd1309c829ee9 379 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.6E-44 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BV404_RS03240 e85fc1fc55e737039dbdd1309c829ee9 379 Pfam PF07196 Flagellin hook IN motif 197 246 6.1E-10 T 09-03-2017 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 BV404_RS03240 e85fc1fc55e737039dbdd1309c829ee9 379 SUPERFAMILY SSF64518 1 379 1.06E-99 T 09-03-2017 BV404_RS03240 e85fc1fc55e737039dbdd1309c829ee9 379 Pfam PF00700 Bacterial flagellin C-terminal helical region 294 378 4.7E-26 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BV404_RS05215 98df4e949005230e918c03ed6034aa82 519 Gene3D G3DSA:3.40.190.10 124 268 9.2E-28 T 09-03-2017 BV404_RS05215 98df4e949005230e918c03ed6034aa82 519 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 66 429 1.0E-63 T 09-03-2017 IPR000914 Solute-binding protein family 5 domain BV404_RS05215 98df4e949005230e918c03ed6034aa82 519 SUPERFAMILY SSF53850 25 512 1.36E-97 T 09-03-2017 BV404_RS05215 98df4e949005230e918c03ed6034aa82 519 PIRSF PIRSF002741 23 518 1.6E-65 T 09-03-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 BV404_RS05215 98df4e949005230e918c03ed6034aa82 519 Gene3D G3DSA:3.10.105.10 269 488 1.0E-40 T 09-03-2017 BV404_RS13860 54a0008d67cb8c65855a8b1114cd09fe 1040 SUPERFAMILY SSF82693 136 181 5.93E-20 T 09-03-2017 BV404_RS13860 54a0008d67cb8c65855a8b1114cd09fe 1040 SUPERFAMILY SSF82693 267 323 5.93E-20 T 09-03-2017 BV404_RS13860 54a0008d67cb8c65855a8b1114cd09fe 1040 SUPERFAMILY SSF82714 701 782 1.12E-17 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BV404_RS13860 54a0008d67cb8c65855a8b1114cd09fe 1040 Gene3D G3DSA:3.30.2090.10 181 263 1.5E-18 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BV404_RS13860 54a0008d67cb8c65855a8b1114cd09fe 1040 PRINTS PR00702 Acriflavin resistance protein family signature 603 617 1.4E-73 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS13860 54a0008d67cb8c65855a8b1114cd09fe 1040 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 1.4E-73 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS13860 54a0008d67cb8c65855a8b1114cd09fe 1040 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 1.4E-73 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS13860 54a0008d67cb8c65855a8b1114cd09fe 1040 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 1.4E-73 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS13860 54a0008d67cb8c65855a8b1114cd09fe 1040 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 1.4E-73 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS13860 54a0008d67cb8c65855a8b1114cd09fe 1040 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.4E-73 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS13860 54a0008d67cb8c65855a8b1114cd09fe 1040 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.4E-73 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS13860 54a0008d67cb8c65855a8b1114cd09fe 1040 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 1.4E-73 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS13860 54a0008d67cb8c65855a8b1114cd09fe 1040 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 1.4E-73 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS13860 54a0008d67cb8c65855a8b1114cd09fe 1040 SUPERFAMILY SSF82693 553 650 5.23E-19 T 09-03-2017 BV404_RS13860 54a0008d67cb8c65855a8b1114cd09fe 1040 SUPERFAMILY SSF82693 41 130 2.17E-23 T 09-03-2017 BV404_RS13860 54a0008d67cb8c65855a8b1114cd09fe 1040 SUPERFAMILY SSF82866 290 489 1.96E-47 T 09-03-2017 BV404_RS13860 54a0008d67cb8c65855a8b1114cd09fe 1040 SUPERFAMILY SSF82714 182 263 1.83E-17 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BV404_RS13860 54a0008d67cb8c65855a8b1114cd09fe 1040 SUPERFAMILY SSF82866 782 1008 1.12E-45 T 09-03-2017 BV404_RS13860 54a0008d67cb8c65855a8b1114cd09fe 1040 Gene3D G3DSA:3.30.70.1430 41 141 1.9E-28 T 09-03-2017 BV404_RS13860 54a0008d67cb8c65855a8b1114cd09fe 1040 Gene3D G3DSA:1.20.1640.10 284 500 3.7E-56 T 09-03-2017 BV404_RS13860 54a0008d67cb8c65855a8b1114cd09fe 1040 Gene3D G3DSA:3.30.2090.10 700 787 1.5E-18 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BV404_RS13860 54a0008d67cb8c65855a8b1114cd09fe 1040 Gene3D G3DSA:1.10.3850.10 792 1006 2.1E-56 T 09-03-2017 BV404_RS13860 54a0008d67cb8c65855a8b1114cd09fe 1040 Gene3D G3DSA:3.30.70.1430 555 650 4.0E-13 T 09-03-2017 BV404_RS13860 54a0008d67cb8c65855a8b1114cd09fe 1040 Pfam PF00873 AcrB/AcrD/AcrF family 4 1003 1.0E-272 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS09775 745f4a7302e7b303da575f60ef8c84a4 377 PIRSF PIRSF038994 2 377 3.9E-91 T 09-03-2017 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 BV404_RS09775 745f4a7302e7b303da575f60ef8c84a4 377 Gene3D G3DSA:3.20.20.140 56 346 7.9E-83 T 09-03-2017 BV404_RS09775 745f4a7302e7b303da575f60ef8c84a4 377 SUPERFAMILY SSF51338 3 55 3.89E-10 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 BV404_RS09775 745f4a7302e7b303da575f60ef8c84a4 377 SUPERFAMILY SSF51556 56 346 1.26E-81 T 09-03-2017 IPR032466 Metal-dependent hydrolase BV404_RS09775 745f4a7302e7b303da575f60ef8c84a4 377 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 4 375 2.4E-84 T 09-03-2017 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 BV404_RS09775 745f4a7302e7b303da575f60ef8c84a4 377 Pfam PF01979 Amidohydrolase family 53 363 6.6E-12 T 09-03-2017 IPR006680 Amidohydrolase-related GO:0016787 BV404_RS01690 f13f2d3489c5d6479a151393b08a7ef5 68 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 1.0E-28 T 09-03-2017 IPR009491 Protein of unknown function DUF1107 BV404_RS01690 f13f2d3489c5d6479a151393b08a7ef5 68 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 63 1.0E-27 T 09-03-2017 IPR009491 Protein of unknown function DUF1107 BV404_RS01690 f13f2d3489c5d6479a151393b08a7ef5 68 Gene3D G3DSA:3.30.1910.10 1 65 3.1E-30 T 09-03-2017 BV404_RS08255 5391ad2358fd7d6e3616b452b20209e5 477 Gene3D G3DSA:3.40.605.10 21 262 9.6E-92 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 BV404_RS08255 5391ad2358fd7d6e3616b452b20209e5 477 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 23 468 2.7E-206 T 09-03-2017 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 BV404_RS08255 5391ad2358fd7d6e3616b452b20209e5 477 Pfam PF00171 Aldehyde dehydrogenase family 21 468 1.5E-165 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 BV404_RS08255 5391ad2358fd7d6e3616b452b20209e5 477 Gene3D G3DSA:3.40.309.10 263 445 1.3E-72 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 BV404_RS08255 5391ad2358fd7d6e3616b452b20209e5 477 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 09-03-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 BV404_RS08255 5391ad2358fd7d6e3616b452b20209e5 477 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 09-03-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 BV404_RS08255 5391ad2358fd7d6e3616b452b20209e5 477 SUPERFAMILY SSF53720 21 473 8.25E-164 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 BV404_RS11480 b351bec4d654b8f564fd201a6ba032e5 427 Gene3D G3DSA:3.90.1380.10 1 82 5.6E-18 T 09-03-2017 IPR029144 Threonine synthase, N-terminal BV404_RS11480 b351bec4d654b8f564fd201a6ba032e5 427 SUPERFAMILY SSF53686 1 425 4.71E-129 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme BV404_RS11480 b351bec4d654b8f564fd201a6ba032e5 427 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 91 367 8.6E-22 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme BV404_RS11480 b351bec4d654b8f564fd201a6ba032e5 427 TIGRFAM TIGR00260 thrC: threonine synthase 51 391 7.3E-113 T 09-03-2017 IPR004450 Threonine synthase-like BV404_RS11480 b351bec4d654b8f564fd201a6ba032e5 427 Gene3D G3DSA:3.40.50.1100 104 192 6.0E-13 T 09-03-2017 BV404_RS11480 b351bec4d654b8f564fd201a6ba032e5 427 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 95 109 - T 09-03-2017 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 BV404_RS11480 b351bec4d654b8f564fd201a6ba032e5 427 Pfam PF14821 Threonine synthase N terminus 8 78 1.2E-8 T 09-03-2017 IPR029144 Threonine synthase, N-terminal BV404_RS11480 b351bec4d654b8f564fd201a6ba032e5 427 Gene3D G3DSA:3.40.50.1100 193 314 4.4E-53 T 09-03-2017 BV404_RS11480 b351bec4d654b8f564fd201a6ba032e5 427 Gene3D G3DSA:3.40.50.1100 323 399 5.0E-14 T 09-03-2017 BV404_RS02275 ec1a3233b628dc3854d009f635ff810f 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 3.0E-37 T 09-03-2017 BV404_RS02275 ec1a3233b628dc3854d009f635ff810f 89 SUPERFAMILY SSF47060 3 89 1.35E-34 T 09-03-2017 IPR009068 S15/NS1, RNA-binding BV404_RS02275 ec1a3233b628dc3854d009f635ff810f 89 Gene3D G3DSA:1.10.287.10 3 89 1.7E-38 T 09-03-2017 IPR009068 S15/NS1, RNA-binding BV404_RS02275 ec1a3233b628dc3854d009f635ff810f 89 Pfam PF00312 Ribosomal protein S15 8 88 5.8E-36 T 09-03-2017 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS02275 ec1a3233b628dc3854d009f635ff810f 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 3.6E-38 T 09-03-2017 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS02275 ec1a3233b628dc3854d009f635ff810f 89 SMART SM01387 8 88 9.2E-52 T 09-03-2017 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS02275 ec1a3233b628dc3854d009f635ff810f 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 09-03-2017 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS02275 ec1a3233b628dc3854d009f635ff810f 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.423 T 09-03-2017 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS01395 328ae97ccadcf9f91eb2e2bf86399c1b 953 Gene3D G3DSA:3.40.50.620 3 193 3.0E-140 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS01395 328ae97ccadcf9f91eb2e2bf86399c1b 953 Gene3D G3DSA:3.40.50.620 609 630 3.0E-140 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS01395 328ae97ccadcf9f91eb2e2bf86399c1b 953 Gene3D G3DSA:3.40.50.620 364 571 3.0E-140 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS01395 328ae97ccadcf9f91eb2e2bf86399c1b 953 SUPERFAMILY SSF46589 886 950 6.28E-18 T 09-03-2017 IPR010978 tRNA-binding arm GO:0000166 BV404_RS01395 328ae97ccadcf9f91eb2e2bf86399c1b 953 SUPERFAMILY SSF52374 364 571 3.13E-135 T 09-03-2017 BV404_RS01395 328ae97ccadcf9f91eb2e2bf86399c1b 953 SUPERFAMILY SSF52374 1 192 3.13E-135 T 09-03-2017 BV404_RS01395 328ae97ccadcf9f91eb2e2bf86399c1b 953 SUPERFAMILY SSF52374 609 641 3.13E-135 T 09-03-2017 BV404_RS01395 328ae97ccadcf9f91eb2e2bf86399c1b 953 Gene3D G3DSA:1.10.287.380 880 945 8.2E-6 T 09-03-2017 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 BV404_RS01395 328ae97ccadcf9f91eb2e2bf86399c1b 953 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 631 1.3E-219 T 09-03-2017 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 BV404_RS01395 328ae97ccadcf9f91eb2e2bf86399c1b 953 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 09-03-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BV404_RS01395 328ae97ccadcf9f91eb2e2bf86399c1b 953 Gene3D G3DSA:1.10.730.10 631 817 7.6E-62 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BV404_RS01395 328ae97ccadcf9f91eb2e2bf86399c1b 953 Gene3D G3DSA:3.90.740.10 194 360 1.9E-48 T 09-03-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 BV404_RS01395 328ae97ccadcf9f91eb2e2bf86399c1b 953 SUPERFAMILY SSF47323 642 900 8.6E-69 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BV404_RS01395 328ae97ccadcf9f91eb2e2bf86399c1b 953 PRINTS PR00986 Valyl-tRNA synthetase signature 369 382 5.2E-35 T 09-03-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BV404_RS01395 328ae97ccadcf9f91eb2e2bf86399c1b 953 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 5.2E-35 T 09-03-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BV404_RS01395 328ae97ccadcf9f91eb2e2bf86399c1b 953 PRINTS PR00986 Valyl-tRNA synthetase signature 500 518 5.2E-35 T 09-03-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BV404_RS01395 328ae97ccadcf9f91eb2e2bf86399c1b 953 PRINTS PR00986 Valyl-tRNA synthetase signature 469 490 5.2E-35 T 09-03-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BV404_RS01395 328ae97ccadcf9f91eb2e2bf86399c1b 953 PRINTS PR00986 Valyl-tRNA synthetase signature 35 46 5.2E-35 T 09-03-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BV404_RS01395 328ae97ccadcf9f91eb2e2bf86399c1b 953 Pfam PF08264 Anticodon-binding domain of tRNA 675 827 3.2E-40 T 09-03-2017 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 BV404_RS01395 328ae97ccadcf9f91eb2e2bf86399c1b 953 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 951 16.074 T 09-03-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BV404_RS01395 328ae97ccadcf9f91eb2e2bf86399c1b 953 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 933 0.0 T 09-03-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BV404_RS01395 328ae97ccadcf9f91eb2e2bf86399c1b 953 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 886 946 4.4E-18 T 09-03-2017 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 BV404_RS01395 328ae97ccadcf9f91eb2e2bf86399c1b 953 SUPERFAMILY SSF50677 191 365 2.49E-59 T 09-03-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 BV404_RS14775 20190c843e534f1e540c54d8a4488359 78 TIGRFAM TIGR03853 matur_matur: putative metal-binding protein 4 78 6.8E-29 T 09-03-2017 IPR019620 Putative metal-binding protein BV404_RS14775 20190c843e534f1e540c54d8a4488359 78 Pfam PF10678 Protein of unknown function (DUF2492) 4 77 1.7E-26 T 09-03-2017 IPR019620 Putative metal-binding protein BV404_RS01240 1910e30ecb2dae8f2a67043f18cecc41 452 Gene3D G3DSA:1.25.60.10 9 131 1.1E-27 T 09-03-2017 BV404_RS01240 1910e30ecb2dae8f2a67043f18cecc41 452 Pfam PF01769 Divalent cation transporter 323 445 1.4E-22 T 09-03-2017 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 BV404_RS01240 1910e30ecb2dae8f2a67043f18cecc41 452 Pfam PF00571 CBS domain 213 257 2.4E-4 T 09-03-2017 IPR000644 CBS domain BV404_RS01240 1910e30ecb2dae8f2a67043f18cecc41 452 Pfam PF00571 CBS domain 140 196 7.6E-5 T 09-03-2017 IPR000644 CBS domain BV404_RS01240 1910e30ecb2dae8f2a67043f18cecc41 452 SMART SM00924 36 139 1.6E-33 T 09-03-2017 IPR006668 Magnesium transporter, MgtE intracellular domain BV404_RS01240 1910e30ecb2dae8f2a67043f18cecc41 452 Gene3D G3DSA:3.10.580.10 132 262 9.2E-18 T 09-03-2017 BV404_RS01240 1910e30ecb2dae8f2a67043f18cecc41 452 SUPERFAMILY SSF161093 280 451 2.09E-44 T 09-03-2017 BV404_RS01240 1910e30ecb2dae8f2a67043f18cecc41 452 Gene3D G3DSA:1.10.357.20 280 451 1.2E-48 T 09-03-2017 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 BV404_RS01240 1910e30ecb2dae8f2a67043f18cecc41 452 SUPERFAMILY SSF158791 11 136 1.31E-29 T 09-03-2017 BV404_RS01240 1910e30ecb2dae8f2a67043f18cecc41 452 TIGRFAM TIGR00400 mgtE: magnesium transporter 17 451 9.0E-88 T 09-03-2017 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 BV404_RS01240 1910e30ecb2dae8f2a67043f18cecc41 452 Pfam PF03448 MgtE intracellular N domain 36 137 4.3E-25 T 09-03-2017 IPR006668 Magnesium transporter, MgtE intracellular domain BV404_RS01240 1910e30ecb2dae8f2a67043f18cecc41 452 SUPERFAMILY SSF54631 138 278 2.02E-28 T 09-03-2017 BV404_RS14110 4b1ea00597eea51f943f1a05bfdc0149 416 Pfam PF00155 Aminotransferase class I and II 68 397 4.5E-26 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BV404_RS14110 4b1ea00597eea51f943f1a05bfdc0149 416 Gene3D G3DSA:3.40.640.10 61 266 1.5E-39 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 BV404_RS14110 4b1ea00597eea51f943f1a05bfdc0149 416 SUPERFAMILY SSF53383 13 411 1.79E-60 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase BV404_RS14110 4b1ea00597eea51f943f1a05bfdc0149 416 Gene3D G3DSA:3.90.1150.10 267 410 1.0E-16 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 BV404_RS12425 3338583c095d326369855c2e61ac4aba 271 Gene3D G3DSA:3.40.50.150 8 196 2.1E-68 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS12425 3338583c095d326369855c2e61ac4aba 271 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 264 2.4E-75 T 09-03-2017 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm BV404_RS12425 3338583c095d326369855c2e61ac4aba 271 Gene3D G3DSA:1.10.8.100 201 263 5.1E-22 T 09-03-2017 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201 BV404_RS12425 3338583c095d326369855c2e61ac4aba 271 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 09-03-2017 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 BV404_RS12425 3338583c095d326369855c2e61ac4aba 271 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 10 263 3.9E-86 T 09-03-2017 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 BV404_RS12425 3338583c095d326369855c2e61ac4aba 271 SMART SM00650 25 197 3.3E-89 T 09-03-2017 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 BV404_RS12425 3338583c095d326369855c2e61ac4aba 271 SUPERFAMILY SSF53335 8 264 5.41E-79 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS12425 3338583c095d326369855c2e61ac4aba 271 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 264 54.72 T 09-03-2017 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 BV404_RS13150 fde42d0cabfb36d9b3be5702b3da99c0 320 Pfam PF03099 Biotin/lipoate A/B protein ligase family 85 207 7.4E-21 T 09-03-2017 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 BV404_RS13150 fde42d0cabfb36d9b3be5702b3da99c0 320 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 7 317 33.315 T 09-03-2017 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 BV404_RS13150 fde42d0cabfb36d9b3be5702b3da99c0 320 SUPERFAMILY SSF46785 6 60 6.31E-10 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS13150 fde42d0cabfb36d9b3be5702b3da99c0 320 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 80 317 1.9E-70 T 09-03-2017 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BV404_RS13150 fde42d0cabfb36d9b3be5702b3da99c0 320 SUPERFAMILY SSF55681 69 268 3.38E-60 T 09-03-2017 BV404_RS13150 fde42d0cabfb36d9b3be5702b3da99c0 320 Pfam PF08279 HTH domain 9 59 6.8E-9 T 09-03-2017 IPR013196 Helix-turn-helix, type 11 BV404_RS13150 fde42d0cabfb36d9b3be5702b3da99c0 320 SUPERFAMILY SSF50037 271 317 4.35E-10 T 09-03-2017 IPR008988 Transcriptional repressor, C-terminal BV404_RS13150 fde42d0cabfb36d9b3be5702b3da99c0 320 Pfam PF02237 Biotin protein ligase C terminal domain 271 317 3.4E-10 T 09-03-2017 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BV404_RS13150 fde42d0cabfb36d9b3be5702b3da99c0 320 Gene3D G3DSA:3.30.930.10 69 269 2.4E-60 T 09-03-2017 BV404_RS13150 fde42d0cabfb36d9b3be5702b3da99c0 320 Gene3D G3DSA:2.30.30.100 271 318 9.0E-21 T 09-03-2017 BV404_RS13150 fde42d0cabfb36d9b3be5702b3da99c0 320 Gene3D G3DSA:1.10.10.10 3 63 1.2E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS13680 be89cc631d86eeeca65c2295366ce52d 261 Pfam PF00005 ABC transporter 22 166 5.9E-28 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS13680 be89cc631d86eeeca65c2295366ce52d 261 Gene3D G3DSA:3.40.50.300 5 230 6.0E-57 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS13680 be89cc631d86eeeca65c2295366ce52d 261 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS13680 be89cc631d86eeeca65c2295366ce52d 261 SUPERFAMILY SSF52540 3 231 2.05E-55 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS13680 be89cc631d86eeeca65c2295366ce52d 261 SMART SM00382 26 215 4.9E-13 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS04735 266930e1f4e7d38e8ceafa730170b718 355 Gene3D G3DSA:3.40.50.1100 144 333 1.7E-37 T 09-03-2017 BV404_RS04735 266930e1f4e7d38e8ceafa730170b718 355 SUPERFAMILY SSF53686 23 335 1.44E-70 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme BV404_RS04735 266930e1f4e7d38e8ceafa730170b718 355 Gene3D G3DSA:3.40.50.1100 48 143 2.9E-23 T 09-03-2017 BV404_RS04735 266930e1f4e7d38e8ceafa730170b718 355 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 36 316 5.1E-41 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme BV404_RS14185 75c4728a33a02feade688b320533819b 631 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 09-03-2017 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 BV404_RS14185 75c4728a33a02feade688b320533819b 631 SMART SM01228 546 617 6.9E-43 T 09-03-2017 BV404_RS14185 75c4728a33a02feade688b320533819b 631 Pfam PF01134 Glucose inhibited division protein A 8 398 2.1E-170 T 09-03-2017 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 BV404_RS14185 75c4728a33a02feade688b320533819b 631 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.487 T 09-03-2017 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 BV404_RS14185 75c4728a33a02feade688b320533819b 631 SUPERFAMILY SSF51905 97 261 1.67E-51 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS14185 75c4728a33a02feade688b320533819b 631 SUPERFAMILY SSF51905 6 66 1.67E-51 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS14185 75c4728a33a02feade688b320533819b 631 Pfam PF13932 GidA associated domain 403 616 3.0E-71 T 09-03-2017 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 BV404_RS14185 75c4728a33a02feade688b320533819b 631 Gene3D G3DSA:3.50.50.60 7 234 1.3E-54 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS14185 75c4728a33a02feade688b320533819b 631 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 3.8E-293 T 09-03-2017 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 BV404_RS14185 75c4728a33a02feade688b320533819b 631 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 09-03-2017 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 BV404_RS03790 163f60d47b9ca140ea94a6f41b41552d 588 PIRSF PIRSF000171 1 580 9.4E-49 T 09-03-2017 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit Reactome: R-HSA-611105|Reactome: R-HSA-71403 BV404_RS03790 163f60d47b9ca140ea94a6f41b41552d 588 Gene3D G3DSA:3.50.50.60 351 424 1.4E-116 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS03790 163f60d47b9ca140ea94a6f41b41552d 588 Gene3D G3DSA:3.50.50.60 6 242 1.4E-116 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS03790 163f60d47b9ca140ea94a6f41b41552d 588 SUPERFAMILY SSF51905 5 259 2.93E-72 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS03790 163f60d47b9ca140ea94a6f41b41552d 588 SUPERFAMILY SSF51905 359 438 2.93E-72 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS03790 163f60d47b9ca140ea94a6f41b41552d 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 09-03-2017 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BV404_RS03790 163f60d47b9ca140ea94a6f41b41552d 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 2.1E-36 T 09-03-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BV404_RS03790 163f60d47b9ca140ea94a6f41b41552d 588 Gene3D G3DSA:4.10.80.40 556 588 3.2E-21 T 09-03-2017 BV404_RS03790 163f60d47b9ca140ea94a6f41b41552d 588 Gene3D G3DSA:1.20.58.100 446 555 2.1E-36 T 09-03-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BV404_RS03790 163f60d47b9ca140ea94a6f41b41552d 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 9.1E-240 T 09-03-2017 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 BV404_RS03790 163f60d47b9ca140ea94a6f41b41552d 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 3.3E-273 T 09-03-2017 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 BV404_RS03790 163f60d47b9ca140ea94a6f41b41552d 588 Pfam PF00890 FAD binding domain 9 405 3.5E-118 T 09-03-2017 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 BV404_RS03790 163f60d47b9ca140ea94a6f41b41552d 588 SUPERFAMILY SSF56425 236 356 2.69E-42 T 09-03-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 BV404_RS03790 163f60d47b9ca140ea94a6f41b41552d 588 SUPERFAMILY SSF46977 451 588 1.83E-46 T 09-03-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BV404_RS03790 163f60d47b9ca140ea94a6f41b41552d 588 Gene3D G3DSA:3.90.700.10 243 349 5.3E-41 T 09-03-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 BV404_RS13305 ef6145665e589f16942c71085798b400 322 Gene3D G3DSA:3.20.20.70 7 245 1.0E-84 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS13305 ef6145665e589f16942c71085798b400 322 SUPERFAMILY SSF51395 10 319 2.2E-90 T 09-03-2017 BV404_RS13305 ef6145665e589f16942c71085798b400 322 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 09-03-2017 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 BV404_RS13305 ef6145665e589f16942c71085798b400 322 PIRSF PIRSF006621 1 321 7.3E-102 T 09-03-2017 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 BV404_RS13305 ef6145665e589f16942c71085798b400 322 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 320 1.0E-132 T 09-03-2017 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 BV404_RS13305 ef6145665e589f16942c71085798b400 322 Gene3D G3DSA:1.10.1200.80 253 320 1.3E-18 T 09-03-2017 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 BV404_RS13305 ef6145665e589f16942c71085798b400 322 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 49.712 T 09-03-2017 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 BV404_RS13305 ef6145665e589f16942c71085798b400 322 Pfam PF01207 Dihydrouridine synthase (Dus) 13 312 7.0E-111 T 09-03-2017 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 BV404_RS08850 aeab9d3d00dc75aa2c299d1f3b1f27c6 404 Gene3D G3DSA:1.10.3150.10 182 398 1.5E-32 T 09-03-2017 IPR013976 Metal-dependent hydrolase HDOD BV404_RS08850 aeab9d3d00dc75aa2c299d1f3b1f27c6 404 Pfam PF00563 EAL domain 73 190 4.0E-12 T 09-03-2017 IPR001633 EAL domain BV404_RS08850 aeab9d3d00dc75aa2c299d1f3b1f27c6 404 PIRSF PIRSF003180 1 403 2.1E-162 T 09-03-2017 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing BV404_RS08850 aeab9d3d00dc75aa2c299d1f3b1f27c6 404 Pfam PF08668 HDOD domain 205 319 2.2E-14 T 09-03-2017 IPR013976 Metal-dependent hydrolase HDOD BV404_RS08850 aeab9d3d00dc75aa2c299d1f3b1f27c6 404 SMART SM00052 2 195 0.006 T 09-03-2017 IPR001633 EAL domain BV404_RS08850 aeab9d3d00dc75aa2c299d1f3b1f27c6 404 SUPERFAMILY SSF109604 181 399 2.7E-41 T 09-03-2017 BV404_RS08850 aeab9d3d00dc75aa2c299d1f3b1f27c6 404 SUPERFAMILY SSF141868 5 191 1.31E-27 T 09-03-2017 IPR001633 EAL domain BV404_RS08850 aeab9d3d00dc75aa2c299d1f3b1f27c6 404 Gene3D G3DSA:3.20.20.450 80 181 7.8E-11 T 09-03-2017 IPR001633 EAL domain BV404_RS09045 dcacb04241c513c4ef3ee4ca2b034d65 284 Pfam PF01636 Phosphotransferase enzyme family 33 219 4.3E-11 T 09-03-2017 IPR002575 Aminoglycoside phosphotransferase BV404_RS09045 dcacb04241c513c4ef3ee4ca2b034d65 284 SUPERFAMILY SSF56112 31 269 4.96E-30 T 09-03-2017 IPR011009 Protein kinase-like domain BV404_RS09045 dcacb04241c513c4ef3ee4ca2b034d65 284 Gene3D G3DSA:3.90.1200.10 82 261 1.5E-10 T 09-03-2017 BV404_RS13645 d1d8102d43f4c39f20c80e761dcac1d9 238 Gene3D G3DSA:3.30.230.70 6 235 3.1E-35 T 09-03-2017 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BV404_RS13645 d1d8102d43f4c39f20c80e761dcac1d9 238 SUPERFAMILY SSF55666 153 236 1.17E-25 T 09-03-2017 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BV404_RS13645 d1d8102d43f4c39f20c80e761dcac1d9 238 Pfam PF03725 3' exoribonuclease family, domain 2 159 224 2.2E-10 T 09-03-2017 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BV404_RS13645 d1d8102d43f4c39f20c80e761dcac1d9 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 6.9E-24 T 09-03-2017 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BV404_RS13645 d1d8102d43f4c39f20c80e761dcac1d9 238 SUPERFAMILY SSF54211 1 181 2.48E-43 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold BV404_RS13645 d1d8102d43f4c39f20c80e761dcac1d9 238 Hamap MF_00564 Ribonuclease PH [rph]. 1 237 48.128 T 09-03-2017 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 BV404_RS13645 d1d8102d43f4c39f20c80e761dcac1d9 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 3.8E-111 T 09-03-2017 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 BV404_RS13645 d1d8102d43f4c39f20c80e761dcac1d9 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 09-03-2017 IPR018336 Ribonuclease PH, conserved site BV404_RS13040 55ab2df7931e5666a94eb10e0f00d943 510 SUPERFAMILY SSF53649 5 78 8.64E-77 T 09-03-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 BV404_RS13040 55ab2df7931e5666a94eb10e0f00d943 510 SUPERFAMILY SSF53649 306 509 8.64E-77 T 09-03-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 BV404_RS13040 55ab2df7931e5666a94eb10e0f00d943 510 Pfam PF01676 Metalloenzyme superfamily 5 494 3.8E-82 T 09-03-2017 IPR006124 Metalloenzyme GO:0003824|GO:0046872 BV404_RS13040 55ab2df7931e5666a94eb10e0f00d943 510 SUPERFAMILY SSF64158 78 308 6.8E-84 T 09-03-2017 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BV404_RS13040 55ab2df7931e5666a94eb10e0f00d943 510 Gene3D G3DSA:3.40.720.10 313 508 1.5E-88 T 09-03-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 BV404_RS13040 55ab2df7931e5666a94eb10e0f00d943 510 Gene3D G3DSA:3.40.720.10 5 78 1.5E-88 T 09-03-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 BV404_RS13040 55ab2df7931e5666a94eb10e0f00d943 510 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 5 509 3.5E-229 T 09-03-2017 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BV404_RS13040 55ab2df7931e5666a94eb10e0f00d943 510 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 83 297 2.1E-81 T 09-03-2017 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BV404_RS13040 55ab2df7931e5666a94eb10e0f00d943 510 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 5 510 50.133 T 09-03-2017 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BV404_RS13040 55ab2df7931e5666a94eb10e0f00d943 510 Gene3D G3DSA:3.40.1450.10 79 308 1.3E-96 T 09-03-2017 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BV404_RS13040 55ab2df7931e5666a94eb10e0f00d943 510 PIRSF PIRSF001492 1 510 1.3E-205 T 09-03-2017 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BV404_RS04330 acf453c0b5728cb352d46d154480a592 481 Gene3D G3DSA:3.20.20.60 172 331 4.2E-95 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 BV404_RS04330 acf453c0b5728cb352d46d154480a592 481 Gene3D G3DSA:3.20.20.60 6 76 4.2E-95 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 BV404_RS04330 acf453c0b5728cb352d46d154480a592 481 Gene3D G3DSA:2.40.33.10 77 170 9.6E-28 T 09-03-2017 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BV404_RS04330 acf453c0b5728cb352d46d154480a592 481 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 09-03-2017 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BV404_RS04330 acf453c0b5728cb352d46d154480a592 481 PRINTS PR01050 Pyruvate kinase family signature 190 204 1.0E-54 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BV404_RS04330 acf453c0b5728cb352d46d154480a592 481 PRINTS PR01050 Pyruvate kinase family signature 250 274 1.0E-54 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BV404_RS04330 acf453c0b5728cb352d46d154480a592 481 PRINTS PR01050 Pyruvate kinase family signature 300 318 1.0E-54 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BV404_RS04330 acf453c0b5728cb352d46d154480a592 481 PRINTS PR01050 Pyruvate kinase family signature 275 299 1.0E-54 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BV404_RS04330 acf453c0b5728cb352d46d154480a592 481 PRINTS PR01050 Pyruvate kinase family signature 319 335 1.0E-54 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BV404_RS04330 acf453c0b5728cb352d46d154480a592 481 PRINTS PR01050 Pyruvate kinase family signature 63 79 1.0E-54 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BV404_RS04330 acf453c0b5728cb352d46d154480a592 481 PRINTS PR01050 Pyruvate kinase family signature 223 249 1.0E-54 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BV404_RS04330 acf453c0b5728cb352d46d154480a592 481 SUPERFAMILY SSF52935 329 480 7.48E-37 T 09-03-2017 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BV404_RS04330 acf453c0b5728cb352d46d154480a592 481 Gene3D G3DSA:3.40.1380.20 332 480 2.9E-40 T 09-03-2017 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BV404_RS04330 acf453c0b5728cb352d46d154480a592 481 SUPERFAMILY SSF50800 74 169 7.33E-25 T 09-03-2017 IPR011037 Pyruvate kinase-like, insert domain BV404_RS04330 acf453c0b5728cb352d46d154480a592 481 SUPERFAMILY SSF51621 171 346 9.42E-88 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 BV404_RS04330 acf453c0b5728cb352d46d154480a592 481 SUPERFAMILY SSF51621 4 79 9.42E-88 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 BV404_RS04330 acf453c0b5728cb352d46d154480a592 481 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 478 5.6E-28 T 09-03-2017 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BV404_RS04330 acf453c0b5728cb352d46d154480a592 481 Pfam PF00224 Pyruvate kinase, barrel domain 6 349 2.7E-130 T 09-03-2017 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BV404_RS04330 acf453c0b5728cb352d46d154480a592 481 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 479 3.4E-168 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BV404_RS06870 ea5679c1bdf8d8218a9b95775f5c3d70 175 SUPERFAMILY SSF50814 9 173 7.48E-49 T 09-03-2017 IPR011038 Calycin-like BV404_RS06870 ea5679c1bdf8d8218a9b95775f5c3d70 175 Pfam PF08212 Lipocalin-like domain 33 170 1.2E-45 T 09-03-2017 IPR000566 Lipocalin/cytosolic fatty-acid binding domain BV404_RS06870 ea5679c1bdf8d8218a9b95775f5c3d70 175 Gene3D G3DSA:2.40.128.20 7 173 1.7E-54 T 09-03-2017 IPR012674 Calycin BV404_RS06870 ea5679c1bdf8d8218a9b95775f5c3d70 175 PRINTS PR01171 Bacterial lipocalin signature 102 116 1.8E-35 T 09-03-2017 IPR002446 Lipocalin, bacterial GO:0005215 BV404_RS06870 ea5679c1bdf8d8218a9b95775f5c3d70 175 PRINTS PR01171 Bacterial lipocalin signature 134 145 1.8E-35 T 09-03-2017 IPR002446 Lipocalin, bacterial GO:0005215 BV404_RS06870 ea5679c1bdf8d8218a9b95775f5c3d70 175 PRINTS PR01171 Bacterial lipocalin signature 161 171 1.8E-35 T 09-03-2017 IPR002446 Lipocalin, bacterial GO:0005215 BV404_RS06870 ea5679c1bdf8d8218a9b95775f5c3d70 175 PRINTS PR01171 Bacterial lipocalin signature 68 77 1.8E-35 T 09-03-2017 IPR002446 Lipocalin, bacterial GO:0005215 BV404_RS06870 ea5679c1bdf8d8218a9b95775f5c3d70 175 PRINTS PR01171 Bacterial lipocalin signature 32 46 1.8E-35 T 09-03-2017 IPR002446 Lipocalin, bacterial GO:0005215 BV404_RS06870 ea5679c1bdf8d8218a9b95775f5c3d70 175 PRINTS PR01171 Bacterial lipocalin signature 49 65 1.8E-35 T 09-03-2017 IPR002446 Lipocalin, bacterial GO:0005215 BV404_RS06870 ea5679c1bdf8d8218a9b95775f5c3d70 175 ProSitePatterns PS00213 Lipocalin signature. 33 44 - T 09-03-2017 IPR022272 Lipocalin family conserved site BV404_RS06870 ea5679c1bdf8d8218a9b95775f5c3d70 175 PIRSF PIRSF036893 2 175 3.1E-45 T 09-03-2017 IPR022271 Lipocalin, ApoD type BV404_RS00915 dab740f51822a16bc6b5871b35e701a5 611 Pfam PF11893 Domain of unknown function (DUF3413) 4 243 9.9E-61 T 09-03-2017 IPR024588 Inner membrane protein YejM, N-terminal BV404_RS00915 dab740f51822a16bc6b5871b35e701a5 611 PIRSF PIRSF004950 1 611 9.5E-212 T 09-03-2017 IPR012159 Inner membrane protein YejM BV404_RS00915 dab740f51822a16bc6b5871b35e701a5 611 Gene3D G3DSA:3.40.720.10 251 546 1.0E-43 T 09-03-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 BV404_RS00915 dab740f51822a16bc6b5871b35e701a5 611 SUPERFAMILY SSF53649 247 585 2.36E-62 T 09-03-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 BV404_RS00915 dab740f51822a16bc6b5871b35e701a5 611 Pfam PF00884 Sulfatase 251 526 5.7E-36 T 09-03-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 BV404_RS06930 3134ce6b1d865d4afb9c03ea8575a259 203 SUPERFAMILY SSF63380 93 198 2.72E-30 T 09-03-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 BV404_RS06930 3134ce6b1d865d4afb9c03ea8575a259 203 Pfam PF00677 Lumazine binding domain 100 184 2.3E-17 T 09-03-2017 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BV404_RS06930 3134ce6b1d865d4afb9c03ea8575a259 203 Pfam PF00677 Lumazine binding domain 3 87 3.3E-21 T 09-03-2017 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BV404_RS06930 3134ce6b1d865d4afb9c03ea8575a259 203 Gene3D G3DSA:2.40.30.20 105 198 6.7E-25 T 09-03-2017 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 BV404_RS06930 3134ce6b1d865d4afb9c03ea8575a259 203 Gene3D G3DSA:2.40.30.20 5 104 6.0E-32 T 09-03-2017 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 BV404_RS06930 3134ce6b1d865d4afb9c03ea8575a259 203 SUPERFAMILY SSF63380 1 93 1.53E-26 T 09-03-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 BV404_RS06930 3134ce6b1d865d4afb9c03ea8575a259 203 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 200 3.2E-74 T 09-03-2017 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BV404_RS06930 3134ce6b1d865d4afb9c03ea8575a259 203 PIRSF PIRSF000498 1 203 1.2E-68 T 09-03-2017 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BV404_RS13490 9f16c3768d5128e73b777029b29ba290 471 Gene3D G3DSA:2.40.30.10 241 335 8.4E-22 T 09-03-2017 BV404_RS13490 9f16c3768d5128e73b777029b29ba290 471 Gene3D G3DSA:3.40.50.300 6 232 3.0E-71 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS13490 9f16c3768d5128e73b777029b29ba290 471 Gene3D G3DSA:2.40.30.10 336 435 1.3E-10 T 09-03-2017 BV404_RS13490 9f16c3768d5128e73b777029b29ba290 471 SUPERFAMILY SSF52540 17 232 4.57E-62 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS13490 9f16c3768d5128e73b777029b29ba290 471 Pfam PF00009 Elongation factor Tu GTP binding domain 24 223 1.6E-45 T 09-03-2017 BV404_RS13490 9f16c3768d5128e73b777029b29ba290 471 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 25 432 5.8E-191 T 09-03-2017 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 BV404_RS13490 9f16c3768d5128e73b777029b29ba290 471 SUPERFAMILY SSF50465 329 433 7.77E-29 T 09-03-2017 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal BV404_RS13490 9f16c3768d5128e73b777029b29ba290 471 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 80 95 - T 09-03-2017 IPR031157 Tr-type G domain, conserved site BV404_RS13490 9f16c3768d5128e73b777029b29ba290 471 Pfam PF03143 Elongation factor Tu C-terminal domain 334 435 4.7E-7 T 09-03-2017 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal BV404_RS13490 9f16c3768d5128e73b777029b29ba290 471 PRINTS PR00315 GTP-binding elongation factor signature 123 134 1.5E-13 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BV404_RS13490 9f16c3768d5128e73b777029b29ba290 471 PRINTS PR00315 GTP-binding elongation factor signature 87 95 1.5E-13 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BV404_RS13490 9f16c3768d5128e73b777029b29ba290 471 PRINTS PR00315 GTP-binding elongation factor signature 160 169 1.5E-13 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BV404_RS13490 9f16c3768d5128e73b777029b29ba290 471 PRINTS PR00315 GTP-binding elongation factor signature 26 39 1.5E-13 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BV404_RS13490 9f16c3768d5128e73b777029b29ba290 471 PRINTS PR00315 GTP-binding elongation factor signature 107 117 1.5E-13 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BV404_RS13490 9f16c3768d5128e73b777029b29ba290 471 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 16 471 50.07 T 09-03-2017 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 BV404_RS13490 9f16c3768d5128e73b777029b29ba290 471 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 31 210 8.0E-13 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 BV404_RS13490 9f16c3768d5128e73b777029b29ba290 471 SUPERFAMILY SSF50447 241 324 1.46E-24 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain BV404_RS04440 43c56b9dd9dae625004fbf422dbab461 278 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 21 261 4.6E-86 T 09-03-2017 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 BV404_RS04440 43c56b9dd9dae625004fbf422dbab461 278 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 18 262 34.272 T 09-03-2017 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 BV404_RS04440 43c56b9dd9dae625004fbf422dbab461 278 Pfam PF12697 Alpha/beta hydrolase family 23 255 3.3E-19 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 BV404_RS04440 43c56b9dd9dae625004fbf422dbab461 278 Gene3D G3DSA:3.40.50.1820 18 262 7.5E-62 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold BV404_RS04440 43c56b9dd9dae625004fbf422dbab461 278 SUPERFAMILY SSF53474 18 261 9.65E-45 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold BV404_RS05635 17feeac8e8dbf505bc98f06b53838c13 434 Gene3D G3DSA:3.40.1190.20 96 298 1.8E-45 T 09-03-2017 IPR029056 Ribokinase-like BV404_RS05635 17feeac8e8dbf505bc98f06b53838c13 434 Gene3D G3DSA:3.40.1190.20 337 434 1.8E-45 T 09-03-2017 IPR029056 Ribokinase-like BV404_RS05635 17feeac8e8dbf505bc98f06b53838c13 434 SUPERFAMILY SSF53613 338 416 2.34E-44 T 09-03-2017 IPR029056 Ribokinase-like BV404_RS05635 17feeac8e8dbf505bc98f06b53838c13 434 SUPERFAMILY SSF53613 31 305 2.34E-44 T 09-03-2017 IPR029056 Ribokinase-like BV404_RS05635 17feeac8e8dbf505bc98f06b53838c13 434 Pfam PF00294 pfkB family carbohydrate kinase 74 292 8.9E-12 T 09-03-2017 IPR011611 Carbohydrate kinase PfkB BV404_RS05635 17feeac8e8dbf505bc98f06b53838c13 434 Gene3D G3DSA:3.30.1110.10 45 95 1.3E-5 T 09-03-2017 BV404_RS14175 eb76ee564bc8947a575d0a14136b2dbc 453 Pfam PF01926 50S ribosome-binding GTPase 217 306 9.0E-24 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 BV404_RS14175 eb76ee564bc8947a575d0a14136b2dbc 453 Gene3D G3DSA:3.40.50.300 193 245 2.9E-8 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS14175 eb76ee564bc8947a575d0a14136b2dbc 453 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 215 368 3.5E-22 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 BV404_RS14175 eb76ee564bc8947a575d0a14136b2dbc 453 Gene3D G3DSA:3.30.1360.120 2 120 2.0E-42 T 09-03-2017 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 BV404_RS14175 eb76ee564bc8947a575d0a14136b2dbc 453 Gene3D G3DSA:1.20.120.430 383 453 1.2E-60 T 09-03-2017 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 BV404_RS14175 eb76ee564bc8947a575d0a14136b2dbc 453 Gene3D G3DSA:1.20.120.430 246 270 1.2E-60 T 09-03-2017 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 BV404_RS14175 eb76ee564bc8947a575d0a14136b2dbc 453 Gene3D G3DSA:1.20.120.430 121 181 1.2E-60 T 09-03-2017 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 BV404_RS14175 eb76ee564bc8947a575d0a14136b2dbc 453 SUPERFAMILY SSF52540 187 371 1.54E-44 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS14175 eb76ee564bc8947a575d0a14136b2dbc 453 SUPERFAMILY SSF52540 71 151 1.54E-44 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS14175 eb76ee564bc8947a575d0a14136b2dbc 453 SUPERFAMILY SSF116878 120 219 1.83E-53 T 09-03-2017 BV404_RS14175 eb76ee564bc8947a575d0a14136b2dbc 453 SUPERFAMILY SSF116878 378 453 1.83E-53 T 09-03-2017 BV404_RS14175 eb76ee564bc8947a575d0a14136b2dbc 453 Pfam PF12631 MnmE helical domain 122 450 1.4E-62 T 09-03-2017 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 BV404_RS14175 eb76ee564bc8947a575d0a14136b2dbc 453 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 4 453 33.196 T 09-03-2017 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 BV404_RS14175 eb76ee564bc8947a575d0a14136b2dbc 453 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 10 453 2.1E-101 T 09-03-2017 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 BV404_RS14175 eb76ee564bc8947a575d0a14136b2dbc 453 Gene3D G3DSA:3.40.50.300 285 375 1.2E-7 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS14175 eb76ee564bc8947a575d0a14136b2dbc 453 Pfam PF10396 GTP-binding protein TrmE N-terminus 5 119 2.2E-35 T 09-03-2017 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 BV404_RS03615 79895ab32adbf2004db1a44ddedb8486 352 SUPERFAMILY SSF101801 247 323 1.02E-13 T 09-03-2017 IPR001543 Surface presentation of antigen (SpoA) BV404_RS03615 79895ab32adbf2004db1a44ddedb8486 352 Gene3D G3DSA:2.30.330.10 243 323 2.5E-9 T 09-03-2017 BV404_RS03615 79895ab32adbf2004db1a44ddedb8486 352 Gene3D G3DSA:3.40.1550.10 60 230 4.6E-8 T 09-03-2017 IPR028976 CheC-like domain BV404_RS03615 79895ab32adbf2004db1a44ddedb8486 352 SUPERFAMILY SSF103039 54 230 4.53E-23 T 09-03-2017 IPR028976 CheC-like domain BV404_RS03615 79895ab32adbf2004db1a44ddedb8486 352 SUPERFAMILY SSF103039 4 13 4.53E-23 T 09-03-2017 IPR028976 CheC-like domain BV404_RS03615 79895ab32adbf2004db1a44ddedb8486 352 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 250 319 3.5E-17 T 09-03-2017 IPR001543 Surface presentation of antigen (SpoA) BV404_RS03615 79895ab32adbf2004db1a44ddedb8486 352 Pfam PF02154 Flagellar motor switch protein FliM 37 229 1.1E-81 T 09-03-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 BV404_RS03615 79895ab32adbf2004db1a44ddedb8486 352 PIRSF PIRSF002888 1 328 3.5E-93 T 09-03-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 BV404_RS03615 79895ab32adbf2004db1a44ddedb8486 352 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 7.6E-19 T 09-03-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 BV404_RS03615 79895ab32adbf2004db1a44ddedb8486 352 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 7.6E-19 T 09-03-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 BV404_RS03615 79895ab32adbf2004db1a44ddedb8486 352 PRINTS PR00955 Flagellar motor switch protein FliM signature 113 132 7.6E-19 T 09-03-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 BV404_RS03615 79895ab32adbf2004db1a44ddedb8486 352 PRINTS PR00955 Flagellar motor switch protein FliM signature 88 104 7.6E-19 T 09-03-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 BV404_RS03615 79895ab32adbf2004db1a44ddedb8486 352 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 319 2.1E-121 T 09-03-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 BV404_RS03380 d51ae27f2c9f8c6cba35fe9e9ab1bc60 269 Pfam PF13371 Tetratricopeptide repeat 188 259 1.3E-23 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BV404_RS03380 d51ae27f2c9f8c6cba35fe9e9ab1bc60 269 Gene3D G3DSA:1.25.40.10 190 259 7.6E-7 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BV404_RS03380 d51ae27f2c9f8c6cba35fe9e9ab1bc60 269 SUPERFAMILY SSF48452 190 258 1.71E-7 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BV404_RS03380 d51ae27f2c9f8c6cba35fe9e9ab1bc60 269 Pfam PF13369 Transglutaminase-like superfamily 34 184 1.0E-43 T 09-03-2017 IPR032698 Protein SirB1, N-terminal BV404_RS13290 bcacd0b26b25a53b8fbf08c1579547cd 153 Gene3D G3DSA:2.40.50.100 77 153 3.9E-33 T 09-03-2017 BV404_RS13290 bcacd0b26b25a53b8fbf08c1579547cd 153 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 109 126 - T 09-03-2017 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BV404_RS13290 bcacd0b26b25a53b8fbf08c1579547cd 153 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 153 3.4E-63 T 09-03-2017 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 BV404_RS13290 bcacd0b26b25a53b8fbf08c1579547cd 153 SUPERFAMILY SSF51230 78 153 9.16E-27 T 09-03-2017 IPR011053 Single hybrid motif BV404_RS13290 bcacd0b26b25a53b8fbf08c1579547cd 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 82 95 8.1E-19 T 09-03-2017 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 BV404_RS13290 bcacd0b26b25a53b8fbf08c1579547cd 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 114 127 8.1E-19 T 09-03-2017 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 BV404_RS13290 bcacd0b26b25a53b8fbf08c1579547cd 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 99 113 8.1E-19 T 09-03-2017 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 BV404_RS13290 bcacd0b26b25a53b8fbf08c1579547cd 153 Pfam PF00364 Biotin-requiring enzyme 80 152 3.9E-25 T 09-03-2017 IPR000089 Biotin/lipoyl attachment BV404_RS14040 063f78b6f698ac86b7842457b988030b 507 Gene3D G3DSA:3.40.50.300 187 386 1.4E-48 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS14040 063f78b6f698ac86b7842457b988030b 507 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 3.5E-48 T 09-03-2017 BV404_RS14040 063f78b6f698ac86b7842457b988030b 507 SMART SM00382 210 390 1.7E-6 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS14040 063f78b6f698ac86b7842457b988030b 507 SUPERFAMILY SSF54211 2 169 9.86E-31 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold BV404_RS14040 063f78b6f698ac86b7842457b988030b 507 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 391 7.5E-91 T 09-03-2017 IPR000523 Magnesium chelatase ChlI domain BV404_RS14040 063f78b6f698ac86b7842457b988030b 507 SUPERFAMILY SSF52540 187 501 2.26E-46 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS14040 063f78b6f698ac86b7842457b988030b 507 Gene3D G3DSA:3.30.230.10 5 153 3.8E-27 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BV404_RS14040 063f78b6f698ac86b7842457b988030b 507 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 493 2.4E-212 T 09-03-2017 IPR004482 Mg chelatase-related protein BV404_RS14040 063f78b6f698ac86b7842457b988030b 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 289 303 7.6E-5 T 09-03-2017 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 BV404_RS14040 063f78b6f698ac86b7842457b988030b 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 7.6E-5 T 09-03-2017 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 BV404_RS14040 063f78b6f698ac86b7842457b988030b 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 317 330 7.6E-5 T 09-03-2017 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 BV404_RS14040 063f78b6f698ac86b7842457b988030b 507 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 493 4.7E-30 T 09-03-2017 IPR025158 Mg chelatase-related protein, C-terminal domain BV404_RS05265 cf71aa361b6edaa8601dae9e5731e0e1 328 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 4.8E-18 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BV404_RS05265 cf71aa361b6edaa8601dae9e5731e0e1 328 Gene3D G3DSA:1.10.260.40 3 53 5.7E-23 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 BV404_RS05265 cf71aa361b6edaa8601dae9e5731e0e1 328 Gene3D G3DSA:3.40.50.2300 54 173 9.0E-37 T 09-03-2017 BV404_RS05265 cf71aa361b6edaa8601dae9e5731e0e1 328 SUPERFAMILY SSF53822 58 318 1.3E-58 T 09-03-2017 IPR028082 Periplasmic binding protein-like I BV404_RS05265 cf71aa361b6edaa8601dae9e5731e0e1 328 SMART SM00354 1 71 3.1E-33 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BV404_RS05265 cf71aa361b6edaa8601dae9e5731e0e1 328 SUPERFAMILY SSF47413 1 60 2.55E-16 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 BV404_RS05265 cf71aa361b6edaa8601dae9e5731e0e1 328 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 09-03-2017 BV404_RS05265 cf71aa361b6edaa8601dae9e5731e0e1 328 Gene3D G3DSA:3.40.50.2300 174 308 5.3E-35 T 09-03-2017 BV404_RS05265 cf71aa361b6edaa8601dae9e5731e0e1 328 Pfam PF13377 Periplasmic binding protein-like domain 170 328 2.7E-28 T 09-03-2017 BV404_RS05265 cf71aa361b6edaa8601dae9e5731e0e1 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.1E-6 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BV404_RS05265 cf71aa361b6edaa8601dae9e5731e0e1 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.1E-6 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BV404_RS04165 d6c5ed3d6d1f315951263d5fbd0e6955 333 Pfam PF04245 37-kD nucleoid-associated bacterial protein 9 326 7.5E-101 T 09-03-2017 IPR007358 Nucleoid-associated protein NdpA GO:0009295 BV404_RS04165 d6c5ed3d6d1f315951263d5fbd0e6955 333 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 332 46.874 T 09-03-2017 IPR007358 Nucleoid-associated protein NdpA GO:0009295 BV404_RS13445 55969b22e3d4ab63a8d50717218e3561 311 Gene3D G3DSA:3.90.25.10 273 310 1.0E-19 T 09-03-2017 BV404_RS13445 55969b22e3d4ab63a8d50717218e3561 311 Gene3D G3DSA:3.90.25.10 176 217 1.0E-19 T 09-03-2017 BV404_RS13445 55969b22e3d4ab63a8d50717218e3561 311 Gene3D G3DSA:3.40.50.720 218 256 3.9E-41 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS13445 55969b22e3d4ab63a8d50717218e3561 311 Gene3D G3DSA:3.40.50.720 7 175 3.9E-41 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS13445 55969b22e3d4ab63a8d50717218e3561 311 Pfam PF01370 NAD dependent epimerase/dehydratase family 12 239 1.7E-43 T 09-03-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 BV404_RS13445 55969b22e3d4ab63a8d50717218e3561 311 SUPERFAMILY SSF51735 7 308 5.72E-70 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS11645 65062cdff43189ba09708cdf5c557db1 420 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 420 29.312 T 09-03-2017 IPR020823 Cell division protein FtsA GO:0007049 BV404_RS11645 65062cdff43189ba09708cdf5c557db1 420 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 7.0E-151 T 09-03-2017 IPR020823 Cell division protein FtsA GO:0007049 BV404_RS11645 65062cdff43189ba09708cdf5c557db1 420 Pfam PF14450 Cell division protein FtsA 207 381 2.7E-24 T 09-03-2017 BV404_RS11645 65062cdff43189ba09708cdf5c557db1 420 SUPERFAMILY SSF53067 8 221 8.09E-59 T 09-03-2017 BV404_RS11645 65062cdff43189ba09708cdf5c557db1 420 Gene3D G3DSA:3.30.420.40 298 359 4.1E-26 T 09-03-2017 BV404_RS11645 65062cdff43189ba09708cdf5c557db1 420 Gene3D G3DSA:3.30.420.40 209 234 4.1E-26 T 09-03-2017 BV404_RS11645 65062cdff43189ba09708cdf5c557db1 420 Gene3D G3DSA:3.30.1490.110 100 166 1.2E-13 T 09-03-2017 BV404_RS11645 65062cdff43189ba09708cdf5c557db1 420 Gene3D G3DSA:3.90.640.10 235 297 2.3E-19 T 09-03-2017 BV404_RS11645 65062cdff43189ba09708cdf5c557db1 420 SMART SM00842 10 196 1.1E-95 T 09-03-2017 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 BV404_RS11645 65062cdff43189ba09708cdf5c557db1 420 Gene3D G3DSA:3.30.420.40 168 208 2.8E-23 T 09-03-2017 BV404_RS11645 65062cdff43189ba09708cdf5c557db1 420 Gene3D G3DSA:3.30.420.40 3 83 2.8E-23 T 09-03-2017 BV404_RS11645 65062cdff43189ba09708cdf5c557db1 420 SUPERFAMILY SSF53067 198 384 2.74E-45 T 09-03-2017 BV404_RS11645 65062cdff43189ba09708cdf5c557db1 420 PIRSF PIRSF003101 1 420 3.4E-147 T 09-03-2017 IPR020823 Cell division protein FtsA GO:0007049 BV404_RS11645 65062cdff43189ba09708cdf5c557db1 420 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 2.6E-28 T 09-03-2017 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 BV404_RS01835 3cf81150ae16c17818b23a03cbbd2aac 505 Pfam PF05235 CHAD domain 231 384 4.0E-7 T 09-03-2017 IPR007899 CHAD domain BV404_RS01835 3cf81150ae16c17818b23a03cbbd2aac 505 SMART SM01118 2 203 4.2E-42 T 09-03-2017 IPR023577 CYTH domain Reactome: R-HSA-196819 BV404_RS01835 3cf81150ae16c17818b23a03cbbd2aac 505 SUPERFAMILY SSF55154 1 213 1.31E-51 T 09-03-2017 IPR033469 CYTH-like domain Reactome: R-HSA-196819 BV404_RS01835 3cf81150ae16c17818b23a03cbbd2aac 505 Gene3D G3DSA:2.40.320.10 1 203 1.7E-38 T 09-03-2017 IPR023577 CYTH domain Reactome: R-HSA-196819 BV404_RS01835 3cf81150ae16c17818b23a03cbbd2aac 505 Pfam PF01928 CYTH domain 3 197 3.2E-33 T 09-03-2017 IPR023577 CYTH domain Reactome: R-HSA-196819 BV404_RS01835 3cf81150ae16c17818b23a03cbbd2aac 505 SMART SM00880 229 497 3.5E-20 T 09-03-2017 IPR007899 CHAD domain BV404_RS07365 e7eaef52dd9691873085b8dc5c9151b4 157 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 89 106 - T 09-03-2017 IPR000614 Free Met sulfoxide reductase conserved site BV404_RS07365 e7eaef52dd9691873085b8dc5c9151b4 157 SUPERFAMILY SSF55781 4 144 3.27E-38 T 09-03-2017 IPR029016 GAF domain-like BV404_RS07365 e7eaef52dd9691873085b8dc5c9151b4 157 Gene3D G3DSA:3.30.450.40 4 151 1.3E-47 T 09-03-2017 IPR029016 GAF domain-like BV404_RS07365 e7eaef52dd9691873085b8dc5c9151b4 157 Pfam PF13185 GAF domain 42 146 4.1E-10 T 09-03-2017 IPR003018 GAF domain GO:0005515 BV404_RS04990 5bb1c5dfdea0cb70c6d8778a14e71e4e 605 Pfam PF00512 His Kinase A (phospho-acceptor) domain 383 446 3.3E-10 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS04990 5bb1c5dfdea0cb70c6d8778a14e71e4e 605 SMART SM00387 492 605 6.2E-14 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS04990 5bb1c5dfdea0cb70c6d8778a14e71e4e 605 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 493 602 1.2E-11 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS04990 5bb1c5dfdea0cb70c6d8778a14e71e4e 605 SUPERFAMILY SSF47384 374 446 1.79E-9 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS04990 5bb1c5dfdea0cb70c6d8778a14e71e4e 605 SUPERFAMILY SSF53850 80 286 2.02E-17 T 09-03-2017 BV404_RS04990 5bb1c5dfdea0cb70c6d8778a14e71e4e 605 Gene3D G3DSA:1.10.287.130 379 444 7.7E-6 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS04990 5bb1c5dfdea0cb70c6d8778a14e71e4e 605 Gene3D G3DSA:3.30.565.10 449 603 8.0E-31 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS04990 5bb1c5dfdea0cb70c6d8778a14e71e4e 605 Gene3D G3DSA:3.40.190.10 133 239 4.2E-8 T 09-03-2017 BV404_RS04990 5bb1c5dfdea0cb70c6d8778a14e71e4e 605 SUPERFAMILY SSF55874 439 603 1.01E-29 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS04990 5bb1c5dfdea0cb70c6d8778a14e71e4e 605 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 47 287 1.0E-35 T 09-03-2017 BV404_RS04990 5bb1c5dfdea0cb70c6d8778a14e71e4e 605 SMART SM00388 381 450 2.6E-9 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS04990 5bb1c5dfdea0cb70c6d8778a14e71e4e 605 PRINTS PR00344 Bacterial sensor protein C-terminal signature 589 602 7.2E-9 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS04990 5bb1c5dfdea0cb70c6d8778a14e71e4e 605 PRINTS PR00344 Bacterial sensor protein C-terminal signature 539 553 7.2E-9 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS04990 5bb1c5dfdea0cb70c6d8778a14e71e4e 605 PRINTS PR00344 Bacterial sensor protein C-terminal signature 565 583 7.2E-9 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS09860 5b5a89f7f3a1dab7a01e0b8889b05fc5 186 SUPERFAMILY SSF110997 109 182 5.75E-15 T 09-03-2017 IPR007730 Sporulation-related domain GO:0042834 BV404_RS09860 5b5a89f7f3a1dab7a01e0b8889b05fc5 186 Pfam PF05036 Sporulation related domain 110 176 1.3E-11 T 09-03-2017 IPR007730 Sporulation-related domain GO:0042834 BV404_RS09860 5b5a89f7f3a1dab7a01e0b8889b05fc5 186 Gene3D G3DSA:3.30.70.1070 105 183 2.6E-20 T 09-03-2017 IPR007730 Sporulation-related domain GO:0042834 BV404_RS02865 6129b0e8a8ec171dda721b8280509a35 324 PIRSF PIRSF005303 1 320 2.6E-85 T 09-03-2017 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 BV404_RS02865 6129b0e8a8ec171dda721b8280509a35 324 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 3 320 1.2E-104 T 09-03-2017 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 BV404_RS02865 6129b0e8a8ec171dda721b8280509a35 324 Pfam PF00586 AIR synthase related protein, N-terminal domain 28 137 2.5E-21 T 09-03-2017 IPR016188 PurM-like, N-terminal domain BV404_RS02865 6129b0e8a8ec171dda721b8280509a35 324 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 2 317 28.98 T 09-03-2017 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 BV404_RS02865 6129b0e8a8ec171dda721b8280509a35 324 SUPERFAMILY SSF56042 142 305 6.13E-35 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain BV404_RS02865 6129b0e8a8ec171dda721b8280509a35 324 Pfam PF02769 AIR synthase related protein, C-terminal domain 149 299 9.2E-9 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain BV404_RS02865 6129b0e8a8ec171dda721b8280509a35 324 Gene3D G3DSA:3.30.1330.10 3 140 2.5E-43 T 09-03-2017 IPR016188 PurM-like, N-terminal domain BV404_RS02865 6129b0e8a8ec171dda721b8280509a35 324 SUPERFAMILY SSF55326 3 137 5.5E-34 T 09-03-2017 BV404_RS02865 6129b0e8a8ec171dda721b8280509a35 324 Gene3D G3DSA:3.90.650.10 144 320 7.4E-48 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain BV404_RS05510 d77bbb9512edcc030313d3cce4c197a2 301 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 46 254 1.2E-44 T 09-03-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 BV404_RS05510 d77bbb9512edcc030313d3cce4c197a2 301 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 124 157 - T 09-03-2017 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 BV404_RS05510 d77bbb9512edcc030313d3cce4c197a2 301 Gene3D G3DSA:3.30.950.10 160 282 9.0E-36 T 09-03-2017 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 BV404_RS05510 d77bbb9512edcc030313d3cce4c197a2 301 Gene3D G3DSA:3.40.1010.10 43 159 7.0E-45 T 09-03-2017 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 BV404_RS05510 d77bbb9512edcc030313d3cce4c197a2 301 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 44 278 3.1E-86 T 09-03-2017 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 BV404_RS05510 d77bbb9512edcc030313d3cce4c197a2 301 SUPERFAMILY SSF53790 42 282 2.09E-69 T 09-03-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 BV404_RS10745 6bb407275672afb65d6a6da70d2c70c2 424 Gene3D G3DSA:1.10.3860.10 3 408 8.7E-108 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BV404_RS10745 6bb407275672afb65d6a6da70d2c70c2 424 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 2.8E-38 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BV404_RS10745 6bb407275672afb65d6a6da70d2c70c2 424 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 2.8E-38 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BV404_RS10745 6bb407275672afb65d6a6da70d2c70c2 424 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 2.8E-38 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BV404_RS10745 6bb407275672afb65d6a6da70d2c70c2 424 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 2.8E-38 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BV404_RS10745 6bb407275672afb65d6a6da70d2c70c2 424 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 2.8E-38 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BV404_RS10745 6bb407275672afb65d6a6da70d2c70c2 424 PRINTS PR00173 Glutamate-aspartate symporter signature 148 170 2.8E-38 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BV404_RS10745 6bb407275672afb65d6a6da70d2c70c2 424 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 2.8E-38 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BV404_RS10745 6bb407275672afb65d6a6da70d2c70c2 424 PRINTS PR00173 Glutamate-aspartate symporter signature 359 379 2.8E-38 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BV404_RS10745 6bb407275672afb65d6a6da70d2c70c2 424 SUPERFAMILY SSF118215 5 406 2.88E-104 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BV404_RS10745 6bb407275672afb65d6a6da70d2c70c2 424 Pfam PF00375 Sodium:dicarboxylate symporter family 6 404 5.6E-114 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BV404_RS01520 67cbfd6365184cdaba1c2588c95a27a6 575 Pfam PF14130 Domain of unknown function (DUF4297) 9 237 2.4E-33 T 09-03-2017 IPR025382 Domain of unknown function DUF4297 BV404_RS01520 67cbfd6365184cdaba1c2588c95a27a6 575 Pfam PF08878 Domain of unknown function (DUF1837) 375 554 2.2E-17 T 09-03-2017 IPR014976 Protein of unknown function DUF1837 BV404_RS09250 f508dbee5402cfb3dd62cf3c7267952d 484 Pfam PF00672 HAMP domain 210 276 4.6E-11 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 BV404_RS09250 f508dbee5402cfb3dd62cf3c7267952d 484 SMART SM00388 280 338 0.0045 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS09250 f508dbee5402cfb3dd62cf3c7267952d 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 460 5.4E-11 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS09250 f508dbee5402cfb3dd62cf3c7267952d 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 425 5.4E-11 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS09250 f508dbee5402cfb3dd62cf3c7267952d 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 439 5.4E-11 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS09250 f508dbee5402cfb3dd62cf3c7267952d 484 Gene3D G3DSA:1.10.287.130 270 331 1.5E-11 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS09250 f508dbee5402cfb3dd62cf3c7267952d 484 SUPERFAMILY SSF47384 264 327 1.47E-10 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS09250 f508dbee5402cfb3dd62cf3c7267952d 484 SMART SM00304 227 279 4.7E-4 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 BV404_RS09250 f508dbee5402cfb3dd62cf3c7267952d 484 SMART SM00387 377 482 1.9E-26 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS09250 f508dbee5402cfb3dd62cf3c7267952d 484 Gene3D G3DSA:3.30.565.10 345 479 1.2E-29 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS09250 f508dbee5402cfb3dd62cf3c7267952d 484 Pfam PF00512 His Kinase A (phospho-acceptor) domain 281 350 1.4E-6 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS09250 f508dbee5402cfb3dd62cf3c7267952d 484 SUPERFAMILY SSF55874 339 479 5.5E-31 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS09250 f508dbee5402cfb3dd62cf3c7267952d 484 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 381 481 6.3E-18 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS02285 a5359795402259ee7d0a56df1f32bdd8 302 PIRSF PIRSF004654 1 295 1.5E-88 T 09-03-2017 IPR023605 Lipoprotein NlpI BV404_RS02285 a5359795402259ee7d0a56df1f32bdd8 302 SMART SM00028 135 168 79.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 BV404_RS02285 a5359795402259ee7d0a56df1f32bdd8 302 SMART SM00028 67 100 0.6 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 BV404_RS02285 a5359795402259ee7d0a56df1f32bdd8 302 SMART SM00028 101 134 5.2E-4 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 BV404_RS02285 a5359795402259ee7d0a56df1f32bdd8 302 SMART SM00028 238 271 16.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 BV404_RS02285 a5359795402259ee7d0a56df1f32bdd8 302 Gene3D G3DSA:1.25.40.10 49 297 4.9E-28 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BV404_RS02285 a5359795402259ee7d0a56df1f32bdd8 302 SUPERFAMILY SSF48452 35 287 1.36E-66 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BV404_RS14690 71e86a2a89c31d842e5e6ca9fe1e6c5d 827 Pfam PF08495 FIST N domain 30 214 1.6E-25 T 09-03-2017 IPR013702 FIST domain, N-terminal BV404_RS14690 71e86a2a89c31d842e5e6ca9fe1e6c5d 827 SMART SM01204 217 342 3.6E-8 T 09-03-2017 IPR019494 FIST, C-domain BV404_RS14690 71e86a2a89c31d842e5e6ca9fe1e6c5d 827 SMART SM00267 404 577 1.1E-4 T 09-03-2017 IPR000160 GGDEF domain BV404_RS14690 71e86a2a89c31d842e5e6ca9fe1e6c5d 827 Gene3D G3DSA:3.30.70.270 417 576 2.0E-15 T 09-03-2017 BV404_RS14690 71e86a2a89c31d842e5e6ca9fe1e6c5d 827 SUPERFAMILY SSF55073 421 575 3.14E-13 T 09-03-2017 IPR029787 Nucleotide cyclase BV404_RS14690 71e86a2a89c31d842e5e6ca9fe1e6c5d 827 Pfam PF10442 FIST C domain 219 339 1.7E-7 T 09-03-2017 IPR019494 FIST, C-domain BV404_RS14690 71e86a2a89c31d842e5e6ca9fe1e6c5d 827 Pfam PF00990 Diguanylate cyclase, GGDEF domain 417 479 8.5E-10 T 09-03-2017 IPR000160 GGDEF domain BV404_RS14690 71e86a2a89c31d842e5e6ca9fe1e6c5d 827 SMART SM00052 591 827 1.2E-39 T 09-03-2017 IPR001633 EAL domain BV404_RS14690 71e86a2a89c31d842e5e6ca9fe1e6c5d 827 Pfam PF00563 EAL domain 598 823 1.2E-57 T 09-03-2017 IPR001633 EAL domain BV404_RS14690 71e86a2a89c31d842e5e6ca9fe1e6c5d 827 Gene3D G3DSA:3.20.20.450 599 825 1.8E-54 T 09-03-2017 IPR001633 EAL domain BV404_RS14690 71e86a2a89c31d842e5e6ca9fe1e6c5d 827 SUPERFAMILY SSF141868 598 825 7.85E-55 T 09-03-2017 IPR001633 EAL domain BV404_RS14690 71e86a2a89c31d842e5e6ca9fe1e6c5d 827 SMART SM00897 27 216 4.9E-24 T 09-03-2017 IPR013702 FIST domain, N-terminal BV404_RS05490 cc14f4edd300661df07618bfe4382f66 449 SUPERFAMILY SSF48019 253 435 4.82E-73 T 09-03-2017 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 BV404_RS05490 cc14f4edd300661df07618bfe4382f66 449 SUPERFAMILY SSF52540 10 235 4.11E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS05490 cc14f4edd300661df07618bfe4382f66 449 Gene3D G3DSA:3.40.50.300 13 154 1.0E-33 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS05490 cc14f4edd300661df07618bfe4382f66 449 Gene3D G3DSA:1.10.3710.10 349 447 1.2E-34 T 09-03-2017 BV404_RS05490 cc14f4edd300661df07618bfe4382f66 449 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 54 159 1.4E-16 T 09-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 BV404_RS05490 cc14f4edd300661df07618bfe4382f66 449 Gene3D G3DSA:1.20.272.10 250 348 2.2E-42 T 09-03-2017 BV404_RS05490 cc14f4edd300661df07618bfe4382f66 449 SMART SM00382 50 166 1.3E-13 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS05490 cc14f4edd300661df07618bfe4382f66 449 Pfam PF16193 AAA C-terminal domain 188 268 3.9E-19 T 09-03-2017 IPR032423 AAA ATPase, C-terminal domain BV404_RS05490 cc14f4edd300661df07618bfe4382f66 449 Pfam PF12002 MgsA AAA+ ATPase C terminal 269 435 1.0E-66 T 09-03-2017 IPR021886 MgsA AAA+ ATPase C-terminal BV404_RS05490 cc14f4edd300661df07618bfe4382f66 449 Gene3D G3DSA:1.10.8.60 155 243 4.3E-8 T 09-03-2017 BV404_RS14070 8dd9cf25ea2edcc50318859369a8fbd4 326 SUPERFAMILY SSF51735 117 291 1.44E-36 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS14070 8dd9cf25ea2edcc50318859369a8fbd4 326 Gene3D G3DSA:3.90.180.10 16 139 7.4E-10 T 09-03-2017 IPR011032 GroES-like BV404_RS14070 8dd9cf25ea2edcc50318859369a8fbd4 326 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 3 326 8.6E-139 T 09-03-2017 IPR014188 Acrylyl-CoA reductase AcuI BV404_RS14070 8dd9cf25ea2edcc50318859369a8fbd4 326 SMART SM00829 13 324 4.8E-4 T 09-03-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BV404_RS14070 8dd9cf25ea2edcc50318859369a8fbd4 326 SUPERFAMILY SSF50129 2 145 9.75E-43 T 09-03-2017 IPR011032 GroES-like BV404_RS14070 8dd9cf25ea2edcc50318859369a8fbd4 326 Pfam PF00107 Zinc-binding dehydrogenase 159 282 2.3E-12 T 09-03-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BV404_RS14070 8dd9cf25ea2edcc50318859369a8fbd4 326 Gene3D G3DSA:3.40.50.720 140 292 1.1E-74 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS02595 2b706a3d0aa98c11c38c7a87ca1985dc 158 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 57 94 - T 09-03-2017 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 BV404_RS02595 2b706a3d0aa98c11c38c7a87ca1985dc 158 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 7 105 5.3E-19 T 09-03-2017 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 BV404_RS02595 2b706a3d0aa98c11c38c7a87ca1985dc 158 Gene3D G3DSA:3.40.140.10 4 153 7.8E-37 T 09-03-2017 BV404_RS02595 2b706a3d0aa98c11c38c7a87ca1985dc 158 SUPERFAMILY SSF53927 4 153 1.32E-35 T 09-03-2017 IPR016193 Cytidine deaminase-like GO:0003824 BV404_RS08215 88c750aaeb56afc810565fd7677ccde4 226 Gene3D G3DSA:3.40.1550.10 16 173 2.5E-14 T 09-03-2017 IPR028976 CheC-like domain BV404_RS08215 88c750aaeb56afc810565fd7677ccde4 226 Pfam PF11813 Protein of unknown function (DUF3334) 3 226 1.4E-115 T 09-03-2017 IPR024513 Protein of unknown function DUF3334 BV404_RS08215 88c750aaeb56afc810565fd7677ccde4 226 SUPERFAMILY SSF103039 10 173 2.49E-24 T 09-03-2017 IPR028976 CheC-like domain BV404_RS07725 97fdf30dd02e6058e3e0dbe540e2f550 278 Gene3D G3DSA:3.30.70.100 174 257 5.1E-22 T 09-03-2017 BV404_RS07725 97fdf30dd02e6058e3e0dbe540e2f550 278 Gene3D G3DSA:2.30.30.60 121 170 2.5E-11 T 09-03-2017 BV404_RS07725 97fdf30dd02e6058e3e0dbe540e2f550 278 SUPERFAMILY SSF82689 172 269 4.45E-27 T 09-03-2017 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 BV404_RS07725 97fdf30dd02e6058e3e0dbe540e2f550 278 SUPERFAMILY SSF82861 21 104 3.92E-15 T 09-03-2017 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 BV404_RS07725 97fdf30dd02e6058e3e0dbe540e2f550 278 SUPERFAMILY SSF50182 105 171 7.52E-14 T 09-03-2017 IPR010920 LSM domain BV404_RS07725 97fdf30dd02e6058e3e0dbe540e2f550 278 Pfam PF00924 Mechanosensitive ion channel 63 259 4.4E-52 T 09-03-2017 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 BV404_RS04535 03e19d75203ccc5e88101efdb6555c09 243 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 6 220 2.8E-53 T 09-03-2017 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 BV404_RS04535 03e19d75203ccc5e88101efdb6555c09 243 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 167 239 1.3E-16 T 09-03-2017 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BV404_RS04535 03e19d75203ccc5e88101efdb6555c09 243 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 120 1.9E-31 T 09-03-2017 IPR020013 Fagellar hook-basal body protein, FlgE/F/G BV404_RS04535 03e19d75203ccc5e88101efdb6555c09 243 SUPERFAMILY SSF117143 77 176 3.53E-13 T 09-03-2017 BV404_RS04535 03e19d75203ccc5e88101efdb6555c09 243 Pfam PF00460 Flagella basal body rod protein 7 35 1.2E-5 T 09-03-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BV404_RS07295 c98f40ede8d74ff4c4e25dda6d66aebd 570 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 550 570 2.9E-4 T 09-03-2017 IPR020008 GlyGly-CTERM domain BV404_RS07295 c98f40ede8d74ff4c4e25dda6d66aebd 570 Pfam PF11949 Protein of unknown function (DUF3466) 5 199 1.2E-6 T 09-03-2017 IPR022562 Protein of unknown function DUF3466 BV404_RS07295 c98f40ede8d74ff4c4e25dda6d66aebd 570 Pfam PF11949 Protein of unknown function (DUF3466) 237 570 1.9E-54 T 09-03-2017 IPR022562 Protein of unknown function DUF3466 BV404_RS09800 9ad3c4f6c9995b9766a300f9d4b265c8 854 Gene3D G3DSA:1.10.1060.10 365 448 8.1E-19 T 09-03-2017 BV404_RS09800 9ad3c4f6c9995b9766a300f9d4b265c8 854 SUPERFAMILY SSF46548 337 446 5.93E-20 T 09-03-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 BV404_RS09800 9ad3c4f6c9995b9766a300f9d4b265c8 854 SUPERFAMILY SSF142019 95 302 1.31E-58 T 09-03-2017 BV404_RS09800 9ad3c4f6c9995b9766a300f9d4b265c8 854 Pfam PF12838 4Fe-4S dicluster domain 377 430 4.6E-8 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BV404_RS09800 9ad3c4f6c9995b9766a300f9d4b265c8 854 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 140 283 4.8E-46 T 09-03-2017 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BV404_RS09800 9ad3c4f6c9995b9766a300f9d4b265c8 854 Hamap MF_00461 Electron transport complex subunit RsxC [rsxC]. 1 773 246.309 T 09-03-2017 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 BV404_RS09800 9ad3c4f6c9995b9766a300f9d4b265c8 854 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 417 428 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BV404_RS09800 9ad3c4f6c9995b9766a300f9d4b265c8 854 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 378 389 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BV404_RS09800 9ad3c4f6c9995b9766a300f9d4b265c8 854 Pfam PF10531 SLBB domain 296 345 1.7E-8 T 09-03-2017 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BV404_RS09800 9ad3c4f6c9995b9766a300f9d4b265c8 854 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 116 1.2E-34 T 09-03-2017 IPR026902 RnfC Barrel sandwich hybrid domain BV404_RS09800 9ad3c4f6c9995b9766a300f9d4b265c8 854 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 448 1.9E-190 T 09-03-2017 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 BV404_RS09040 44d4f11be6bbf2be069095c6f17899f7 179 Gene3D G3DSA:3.40.50.1820 2 149 5.9E-4 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold BV404_RS09040 44d4f11be6bbf2be069095c6f17899f7 179 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 48.86 T 09-03-2017 IPR022987 Uncharacterised protein family UPF0227 BV404_RS09040 44d4f11be6bbf2be069095c6f17899f7 179 SUPERFAMILY SSF53474 2 176 5.33E-7 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold BV404_RS09040 44d4f11be6bbf2be069095c6f17899f7 179 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 8.6E-70 T 09-03-2017 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA BV404_RS07710 572237bca4003dd56a20c4d18c8e4b8f 225 SUPERFAMILY SSF46894 125 220 3.12E-20 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BV404_RS07710 572237bca4003dd56a20c4d18c8e4b8f 225 SMART SM00448 1 112 1.4E-40 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS07710 572237bca4003dd56a20c4d18c8e4b8f 225 Pfam PF00072 Response regulator receiver domain 4 112 2.6E-27 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS07710 572237bca4003dd56a20c4d18c8e4b8f 225 Gene3D G3DSA:1.10.10.10 125 220 2.7E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS07710 572237bca4003dd56a20c4d18c8e4b8f 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 2.7E-16 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BV404_RS07710 572237bca4003dd56a20c4d18c8e4b8f 225 SUPERFAMILY SSF52172 2 122 4.7E-37 T 09-03-2017 IPR011006 CheY-like superfamily BV404_RS07710 572237bca4003dd56a20c4d18c8e4b8f 225 Gene3D G3DSA:3.40.50.2300 2 123 1.2E-35 T 09-03-2017 BV404_RS07710 572237bca4003dd56a20c4d18c8e4b8f 225 SMART SM00862 146 221 4.7E-16 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BV404_RS07535 f8e6be78297be2de43b3f0ba1da100b2 380 Gene3D G3DSA:3.30.70.270 226 377 1.4E-46 T 09-03-2017 BV404_RS07535 f8e6be78297be2de43b3f0ba1da100b2 380 Pfam PF00990 Diguanylate cyclase, GGDEF domain 225 375 1.5E-39 T 09-03-2017 IPR000160 GGDEF domain BV404_RS07535 f8e6be78297be2de43b3f0ba1da100b2 380 SMART SM00267 212 379 2.3E-46 T 09-03-2017 IPR000160 GGDEF domain BV404_RS07535 f8e6be78297be2de43b3f0ba1da100b2 380 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 222 377 2.9E-45 T 09-03-2017 IPR000160 GGDEF domain BV404_RS07535 f8e6be78297be2de43b3f0ba1da100b2 380 SUPERFAMILY SSF55073 229 377 1.26E-40 T 09-03-2017 IPR029787 Nucleotide cyclase BV404_RS07275 9f4f62529d542efb28a2287648d0d6ee 149 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 29.075 T 09-03-2017 IPR009390 Macrodomain Ter protein, MatP GO:0043565 BV404_RS07275 9f4f62529d542efb28a2287648d0d6ee 149 Pfam PF06303 Organiser of macrodomain of Terminus of chromosome 1 147 1.7E-69 T 09-03-2017 IPR009390 Macrodomain Ter protein, MatP GO:0043565 BV404_RS07275 9f4f62529d542efb28a2287648d0d6ee 149 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 134 3.0E-64 T 09-03-2017 IPR009390 Macrodomain Ter protein, MatP GO:0043565 BV404_RS08225 37c28b85dc740f1cd43afe0b52483190 222 Pfam PF00691 OmpA family 118 212 5.0E-21 T 09-03-2017 IPR006665 OmpA-like domain BV404_RS08225 37c28b85dc740f1cd43afe0b52483190 222 SUPERFAMILY SSF103088 106 221 2.35E-36 T 09-03-2017 IPR006665 OmpA-like domain BV404_RS08225 37c28b85dc740f1cd43afe0b52483190 222 Gene3D G3DSA:3.30.1330.60 107 220 3.2E-36 T 09-03-2017 IPR006665 OmpA-like domain BV404_RS08225 37c28b85dc740f1cd43afe0b52483190 222 Pfam PF13488 Glycine zipper 38 86 6.2E-12 T 09-03-2017 BV404_RS08225 37c28b85dc740f1cd43afe0b52483190 222 PRINTS PR01021 OMPA domain signature 118 140 7.4E-10 T 09-03-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BV404_RS08225 37c28b85dc740f1cd43afe0b52483190 222 PRINTS PR01021 OMPA domain signature 148 163 7.4E-10 T 09-03-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BV404_RS08225 37c28b85dc740f1cd43afe0b52483190 222 PRINTS PR01021 OMPA domain signature 163 179 7.4E-10 T 09-03-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BV404_RS04415 e2e9b57c05c0529dcd268ce89d6479bd 442 Pfam PF13286 Phosphohydrolase-associated domain 343 434 3.1E-29 T 09-03-2017 IPR026875 Phosphohydrolase-associated domain BV404_RS04415 e2e9b57c05c0529dcd268ce89d6479bd 442 Gene3D G3DSA:1.10.3410.10 251 354 1.8E-25 T 09-03-2017 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain BV404_RS04415 e2e9b57c05c0529dcd268ce89d6479bd 442 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 5 436 34.552 T 09-03-2017 IPR023023 Deoxyguanosinetriphosphate triphosphohydrolase, type 2 BV404_RS04415 e2e9b57c05c0529dcd268ce89d6479bd 442 Pfam PF01966 HD domain 62 143 6.0E-7 T 09-03-2017 IPR006674 HD domain BV404_RS04415 e2e9b57c05c0529dcd268ce89d6479bd 442 SUPERFAMILY SSF109604 232 439 3.45E-82 T 09-03-2017 BV404_RS04415 e2e9b57c05c0529dcd268ce89d6479bd 442 SUPERFAMILY SSF109604 23 167 3.45E-82 T 09-03-2017 BV404_RS04415 e2e9b57c05c0529dcd268ce89d6479bd 442 Gene3D G3DSA:1.10.3210.10 4 250 2.3E-69 T 09-03-2017 IPR006674 HD domain BV404_RS04415 e2e9b57c05c0529dcd268ce89d6479bd 442 SMART SM00471 58 264 6.8E-8 T 09-03-2017 IPR003607 HD/PDEase domain BV404_RS04415 e2e9b57c05c0529dcd268ce89d6479bd 442 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 24 437 8.4E-132 T 09-03-2017 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 BV404_RS04415 e2e9b57c05c0529dcd268ce89d6479bd 442 Gene3D G3DSA:1.10.3550.10 355 433 5.9E-6 T 09-03-2017 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain BV404_RS09380 d1e877b849203904bf4d36235b485710 315 Gene3D G3DSA:3.40.190.10 176 263 2.3E-24 T 09-03-2017 BV404_RS09380 d1e877b849203904bf4d36235b485710 315 Gene3D G3DSA:1.10.10.10 7 85 1.7E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS09380 d1e877b849203904bf4d36235b485710 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 1.8E-18 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS09380 d1e877b849203904bf4d36235b485710 315 Pfam PF03466 LysR substrate binding domain 90 295 6.1E-48 T 09-03-2017 IPR005119 LysR, substrate-binding BV404_RS09380 d1e877b849203904bf4d36235b485710 315 SUPERFAMILY SSF53850 91 299 4.34E-50 T 09-03-2017 BV404_RS09380 d1e877b849203904bf4d36235b485710 315 Gene3D G3DSA:3.40.190.10 91 175 3.2E-10 T 09-03-2017 BV404_RS09380 d1e877b849203904bf4d36235b485710 315 SUPERFAMILY SSF46785 7 114 6.51E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS08925 31cfcf722a10ad271964493ba84498b6 328 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 27 325 9.0E-84 T 09-03-2017 IPR018707 Protein of unknown function DUF2219 BV404_RS08925 31cfcf722a10ad271964493ba84498b6 328 Gene3D G3DSA:2.40.128.140 11 324 9.8E-98 T 09-03-2017 BV404_RS01040 756d9a7dbdd6c76983597e7873ac5986 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.137 T 09-03-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS01040 756d9a7dbdd6c76983597e7873ac5986 37 Pfam PF00444 Ribosomal protein L36 1 37 8.8E-19 T 09-03-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS01040 756d9a7dbdd6c76983597e7873ac5986 37 SUPERFAMILY SSF57840 1 37 1.02E-16 T 09-03-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS01040 756d9a7dbdd6c76983597e7873ac5986 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 3.0E-9 T 09-03-2017 BV404_RS01040 756d9a7dbdd6c76983597e7873ac5986 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 09-03-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS01040 756d9a7dbdd6c76983597e7873ac5986 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 4.0E-23 T 09-03-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS11605 27d7f836a51ae5ec36ba0340c08589ab 1076 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 09-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BV404_RS11605 27d7f836a51ae5ec36ba0340c08589ab 1076 Gene3D G3DSA:3.30.470.20 200 399 4.2E-74 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 BV404_RS11605 27d7f836a51ae5ec36ba0340c08589ab 1076 Gene3D G3DSA:3.30.470.20 745 932 3.2E-82 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 BV404_RS11605 27d7f836a51ae5ec36ba0340c08589ab 1076 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1050 0.0 T 09-03-2017 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 BV404_RS11605 27d7f836a51ae5ec36ba0340c08589ab 1076 SUPERFAMILY SSF56059 128 401 7.25E-109 T 09-03-2017 BV404_RS11605 27d7f836a51ae5ec36ba0340c08589ab 1076 Gene3D G3DSA:3.30.1490.20 141 199 8.5E-25 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 BV404_RS11605 27d7f836a51ae5ec36ba0340c08589ab 1076 Gene3D G3DSA:3.40.50.20 539 662 6.4E-61 T 09-03-2017 IPR016185 Pre-ATP-grasp domain BV404_RS11605 27d7f836a51ae5ec36ba0340c08589ab 1076 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 875 1.9E-38 T 09-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BV404_RS11605 27d7f836a51ae5ec36ba0340c08589ab 1076 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.2E-72 T 09-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BV404_RS11605 27d7f836a51ae5ec36ba0340c08589ab 1076 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.383 T 09-03-2017 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 BV404_RS11605 27d7f836a51ae5ec36ba0340c08589ab 1076 SMART SM00851 955 1041 3.0E-26 T 09-03-2017 IPR011607 Methylglyoxal synthase-like domain BV404_RS11605 27d7f836a51ae5ec36ba0340c08589ab 1076 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.102 T 09-03-2017 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 BV404_RS11605 27d7f836a51ae5ec36ba0340c08589ab 1076 SUPERFAMILY SSF56059 673 932 3.18E-104 T 09-03-2017 BV404_RS11605 27d7f836a51ae5ec36ba0340c08589ab 1076 Gene3D G3DSA:3.30.1490.20 688 744 3.8E-26 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 BV404_RS11605 27d7f836a51ae5ec36ba0340c08589ab 1076 Gene3D G3DSA:1.10.1030.10 400 538 2.5E-51 T 09-03-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 BV404_RS11605 27d7f836a51ae5ec36ba0340c08589ab 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 1.6E-64 T 09-03-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 BV404_RS11605 27d7f836a51ae5ec36ba0340c08589ab 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.6E-64 T 09-03-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 BV404_RS11605 27d7f836a51ae5ec36ba0340c08589ab 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 1.6E-64 T 09-03-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 BV404_RS11605 27d7f836a51ae5ec36ba0340c08589ab 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.6E-64 T 09-03-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 BV404_RS11605 27d7f836a51ae5ec36ba0340c08589ab 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.6E-64 T 09-03-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 BV404_RS11605 27d7f836a51ae5ec36ba0340c08589ab 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.6E-64 T 09-03-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 BV404_RS11605 27d7f836a51ae5ec36ba0340c08589ab 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.6E-64 T 09-03-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 BV404_RS11605 27d7f836a51ae5ec36ba0340c08589ab 1076 Pfam PF02142 MGS-like domain 956 1041 3.5E-16 T 09-03-2017 IPR011607 Methylglyoxal synthase-like domain BV404_RS11605 27d7f836a51ae5ec36ba0340c08589ab 1076 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 09-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BV404_RS11605 27d7f836a51ae5ec36ba0340c08589ab 1076 Gene3D G3DSA:3.40.50.1380 939 1071 8.7E-39 T 09-03-2017 IPR011607 Methylglyoxal synthase-like domain BV404_RS11605 27d7f836a51ae5ec36ba0340c08589ab 1076 Gene3D G3DSA:3.40.50.20 3 108 1.2E-45 T 09-03-2017 IPR016185 Pre-ATP-grasp domain BV404_RS11605 27d7f836a51ae5ec36ba0340c08589ab 1076 SUPERFAMILY SSF52440 556 675 2.01E-49 T 09-03-2017 IPR016185 Pre-ATP-grasp domain BV404_RS11605 27d7f836a51ae5ec36ba0340c08589ab 1076 SMART SM01096 424 547 9.2E-75 T 09-03-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 BV404_RS11605 27d7f836a51ae5ec36ba0340c08589ab 1076 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 09-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BV404_RS11605 27d7f836a51ae5ec36ba0340c08589ab 1076 SUPERFAMILY SSF52440 1 127 6.62E-50 T 09-03-2017 IPR016185 Pre-ATP-grasp domain BV404_RS11605 27d7f836a51ae5ec36ba0340c08589ab 1076 SUPERFAMILY SSF52335 937 1071 9.81E-35 T 09-03-2017 IPR011607 Methylglyoxal synthase-like domain BV404_RS11605 27d7f836a51ae5ec36ba0340c08589ab 1076 SUPERFAMILY SSF48108 396 554 2.35E-51 T 09-03-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 BV404_RS11605 27d7f836a51ae5ec36ba0340c08589ab 1076 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 09-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BV404_RS11605 27d7f836a51ae5ec36ba0340c08589ab 1076 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 4.3E-40 T 09-03-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 BV404_RS11785 4625c43d7531ed19eab3dab45b571be9 455 Pfam PF13365 Trypsin-like peptidase domain 92 228 8.6E-32 T 09-03-2017 BV404_RS11785 4625c43d7531ed19eab3dab45b571be9 455 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 373 444 2.6E-9 T 09-03-2017 IPR001478 PDZ domain GO:0005515 BV404_RS11785 4625c43d7531ed19eab3dab45b571be9 455 SUPERFAMILY SSF50156 225 350 1.71E-27 T 09-03-2017 IPR001478 PDZ domain GO:0005515 BV404_RS11785 4625c43d7531ed19eab3dab45b571be9 455 Gene3D G3DSA:2.40.10.10 37 155 1.2E-34 T 09-03-2017 BV404_RS11785 4625c43d7531ed19eab3dab45b571be9 455 SMART SM00228 374 447 1.8E-7 T 09-03-2017 IPR001478 PDZ domain GO:0005515 BV404_RS11785 4625c43d7531ed19eab3dab45b571be9 455 SMART SM00228 267 349 2.2E-17 T 09-03-2017 IPR001478 PDZ domain GO:0005515 BV404_RS11785 4625c43d7531ed19eab3dab45b571be9 455 Pfam PF13180 PDZ domain 269 358 7.0E-19 T 09-03-2017 IPR001478 PDZ domain GO:0005515 BV404_RS11785 4625c43d7531ed19eab3dab45b571be9 455 Gene3D G3DSA:2.30.42.10 388 454 9.5E-17 T 09-03-2017 IPR001478 PDZ domain GO:0005515 BV404_RS11785 4625c43d7531ed19eab3dab45b571be9 455 SUPERFAMILY SSF50494 37 263 6.99E-66 T 09-03-2017 IPR009003 Peptidase S1, PA clan BV404_RS11785 4625c43d7531ed19eab3dab45b571be9 455 Gene3D G3DSA:2.30.42.10 270 365 7.1E-32 T 09-03-2017 IPR001478 PDZ domain GO:0005515 BV404_RS11785 4625c43d7531ed19eab3dab45b571be9 455 Gene3D G3DSA:2.40.10.10 156 269 8.6E-45 T 09-03-2017 BV404_RS11785 4625c43d7531ed19eab3dab45b571be9 455 PRINTS PR00834 HtrA/DegQ protease family signature 102 114 5.6E-58 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BV404_RS11785 4625c43d7531ed19eab3dab45b571be9 455 PRINTS PR00834 HtrA/DegQ protease family signature 221 238 5.6E-58 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BV404_RS11785 4625c43d7531ed19eab3dab45b571be9 455 PRINTS PR00834 HtrA/DegQ protease family signature 123 143 5.6E-58 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BV404_RS11785 4625c43d7531ed19eab3dab45b571be9 455 PRINTS PR00834 HtrA/DegQ protease family signature 307 319 5.6E-58 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BV404_RS11785 4625c43d7531ed19eab3dab45b571be9 455 PRINTS PR00834 HtrA/DegQ protease family signature 164 188 5.6E-58 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BV404_RS11785 4625c43d7531ed19eab3dab45b571be9 455 PRINTS PR00834 HtrA/DegQ protease family signature 199 216 5.6E-58 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BV404_RS11785 4625c43d7531ed19eab3dab45b571be9 455 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 39 453 2.6E-167 T 09-03-2017 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 BV404_RS11785 4625c43d7531ed19eab3dab45b571be9 455 SUPERFAMILY SSF50156 384 454 3.55E-14 T 09-03-2017 IPR001478 PDZ domain GO:0005515 BV404_RS13030 5dd3add33b6458dcb161c8177f95ef59 626 SUPERFAMILY SSF58104 317 626 8.5E-78 T 09-03-2017 BV404_RS13030 5dd3add33b6458dcb161c8177f95ef59 626 SUPERFAMILY SSF103190 75 176 1.65E-10 T 09-03-2017 IPR029151 Periplasmic sensor domain-like BV404_RS13030 5dd3add33b6458dcb161c8177f95ef59 626 Pfam PF00672 HAMP domain 277 345 1.1E-12 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 BV404_RS13030 5dd3add33b6458dcb161c8177f95ef59 626 Pfam PF02743 Cache domain 26 258 1.6E-26 T 09-03-2017 IPR033479 Double Cache domain 1 BV404_RS13030 5dd3add33b6458dcb161c8177f95ef59 626 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 431 624 4.4E-47 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 BV404_RS13030 5dd3add33b6458dcb161c8177f95ef59 626 SMART SM00304 295 349 5.7E-11 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 BV404_RS13030 5dd3add33b6458dcb161c8177f95ef59 626 SMART SM00304 384 451 95.0 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 BV404_RS13030 5dd3add33b6458dcb161c8177f95ef59 626 Gene3D G3DSA:3.30.450.20 152 270 4.3E-22 T 09-03-2017 BV404_RS13030 5dd3add33b6458dcb161c8177f95ef59 626 Gene3D G3DSA:3.30.450.20 86 151 2.2E-20 T 09-03-2017 BV404_RS13030 5dd3add33b6458dcb161c8177f95ef59 626 Gene3D G3DSA:1.10.287.950 379 595 2.7E-57 T 09-03-2017 BV404_RS13030 5dd3add33b6458dcb161c8177f95ef59 626 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 491 520 1.9E-21 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 BV404_RS13030 5dd3add33b6458dcb161c8177f95ef59 626 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 272 292 1.9E-21 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 BV404_RS13030 5dd3add33b6458dcb161c8177f95ef59 626 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 462 489 1.9E-21 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 BV404_RS13030 5dd3add33b6458dcb161c8177f95ef59 626 SMART SM00283 364 625 1.9E-67 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 BV404_RS06365 dc6b7b3c306dfb3ce8c84b32d619aa38 495 Gene3D G3DSA:1.20.5.320 453 491 2.2E-19 T 09-03-2017 IPR012284 6-phosphogluconate dehydrogenase, domain 3 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BV404_RS06365 dc6b7b3c306dfb3ce8c84b32d619aa38 495 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 195 485 6.4E-118 T 09-03-2017 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BV404_RS06365 dc6b7b3c306dfb3ce8c84b32d619aa38 495 SUPERFAMILY SSF51735 3 174 1.97E-36 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS06365 dc6b7b3c306dfb3ce8c84b32d619aa38 495 Gene3D G3DSA:3.40.50.720 4 196 1.3E-41 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS06365 dc6b7b3c306dfb3ce8c84b32d619aa38 495 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 270 282 - T 09-03-2017 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BV404_RS06365 dc6b7b3c306dfb3ce8c84b32d619aa38 495 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 4 486 7.6E-170 T 09-03-2017 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BV404_RS06365 dc6b7b3c306dfb3ce8c84b32d619aa38 495 PIRSF PIRSF000109 1 494 3.3E-167 T 09-03-2017 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BV404_RS06365 dc6b7b3c306dfb3ce8c84b32d619aa38 495 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 184 212 7.9E-49 T 09-03-2017 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BV404_RS06365 dc6b7b3c306dfb3ce8c84b32d619aa38 495 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 266 293 7.9E-49 T 09-03-2017 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BV404_RS06365 dc6b7b3c306dfb3ce8c84b32d619aa38 495 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 3 26 7.9E-49 T 09-03-2017 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BV404_RS06365 dc6b7b3c306dfb3ce8c84b32d619aa38 495 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 373 395 7.9E-49 T 09-03-2017 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BV404_RS06365 dc6b7b3c306dfb3ce8c84b32d619aa38 495 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 72 101 7.9E-49 T 09-03-2017 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BV404_RS06365 dc6b7b3c306dfb3ce8c84b32d619aa38 495 SUPERFAMILY SSF48179 193 488 1.59E-112 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 BV404_RS06365 dc6b7b3c306dfb3ce8c84b32d619aa38 495 SMART SM01350 195 486 1.7E-178 T 09-03-2017 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BV404_RS06365 dc6b7b3c306dfb3ce8c84b32d619aa38 495 Gene3D G3DSA:1.10.1040.10 197 451 4.5E-100 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BV404_RS06365 dc6b7b3c306dfb3ce8c84b32d619aa38 495 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 170 5.4E-34 T 09-03-2017 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 BV404_RS10585 ac304ace5025c233615f7c2545a0ee38 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 10 65 3.6E-22 T 09-03-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 BV404_RS10585 ac304ace5025c233615f7c2545a0ee38 80 Gene3D G3DSA:1.10.287.1040 5 76 1.9E-27 T 09-03-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 BV404_RS10585 ac304ace5025c233615f7c2545a0ee38 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 10 70 15.669 T 09-03-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 BV404_RS10585 ac304ace5025c233615f7c2545a0ee38 80 SUPERFAMILY SSF116842 2 74 1.09E-21 T 09-03-2017 BV404_RS10585 ac304ace5025c233615f7c2545a0ee38 80 PIRSF PIRSF006488 1 78 1.5E-22 T 09-03-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 BV404_RS10585 ac304ace5025c233615f7c2545a0ee38 80 Pfam PF02609 Exonuclease VII small subunit 11 61 7.9E-20 T 09-03-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 BV404_RS10585 ac304ace5025c233615f7c2545a0ee38 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 50 1.0E-18 T 09-03-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 BV404_RS09170 9bdba3f1edd003b8cbb86af22f4e1f4c 98 SUPERFAMILY SSF47781 26 97 9.23E-27 T 09-03-2017 IPR010994 RuvA domain 2-like BV404_RS09170 9bdba3f1edd003b8cbb86af22f4e1f4c 98 Gene3D G3DSA:1.10.150.280 29 98 1.9E-19 T 09-03-2017 BV404_RS09170 9bdba3f1edd003b8cbb86af22f4e1f4c 98 Pfam PF12836 Helix-hairpin-helix motif 36 96 1.5E-21 T 09-03-2017 BV404_RS09170 9bdba3f1edd003b8cbb86af22f4e1f4c 98 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 36 97 1.7E-24 T 09-03-2017 IPR004509 Competence protein ComEA, helix-hairpin-helix domain BV404_RS09170 9bdba3f1edd003b8cbb86af22f4e1f4c 98 SMART SM00278 46 65 13.0 T 09-03-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BV404_RS09170 9bdba3f1edd003b8cbb86af22f4e1f4c 98 SMART SM00278 76 95 110.0 T 09-03-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BV404_RS08720 e98820a9bbbd3e6be6a4f506354b589e 208 SUPERFAMILY SSF46689 3 74 8.72E-18 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS08720 e98820a9bbbd3e6be6a4f506354b589e 208 Gene3D G3DSA:1.10.357.10 3 206 2.8E-37 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 BV404_RS08720 e98820a9bbbd3e6be6a4f506354b589e 208 SUPERFAMILY SSF48498 80 207 1.11E-41 T 09-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal BV404_RS08720 e98820a9bbbd3e6be6a4f506354b589e 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 6.3E-7 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BV404_RS08720 e98820a9bbbd3e6be6a4f506354b589e 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 6.3E-7 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BV404_RS08720 e98820a9bbbd3e6be6a4f506354b589e 208 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 54 - T 09-03-2017 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BV404_RS08720 e98820a9bbbd3e6be6a4f506354b589e 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 1.5E-11 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BV404_RS01930 3fbf553552d219acafe04203624d2e75 295 PIRSF PIRSF006250 16 295 4.0E-102 T 09-03-2017 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 BV404_RS01930 3fbf553552d219acafe04203624d2e75 295 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 130 293 6.5E-58 T 09-03-2017 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 BV404_RS01930 3fbf553552d219acafe04203624d2e75 295 Gene3D G3DSA:3.20.20.70 150 283 3.3E-60 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS01930 3fbf553552d219acafe04203624d2e75 295 Gene3D G3DSA:3.90.1170.20 16 149 1.6E-52 T 09-03-2017 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 BV404_RS01930 3fbf553552d219acafe04203624d2e75 295 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 41 127 1.2E-27 T 09-03-2017 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 BV404_RS01930 3fbf553552d219acafe04203624d2e75 295 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 26 294 6.1E-95 T 09-03-2017 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 BV404_RS01930 3fbf553552d219acafe04203624d2e75 295 SUPERFAMILY SSF51690 130 294 4.32E-61 T 09-03-2017 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 BV404_RS01930 3fbf553552d219acafe04203624d2e75 295 SUPERFAMILY SSF54675 15 128 1.37E-33 T 09-03-2017 BV404_RS14680 714e160ee4a48f93eef279d1a00612ac 309 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 14 303 54.887 T 09-03-2017 IPR023009 Tyrosine recombinase XerC/XerD BV404_RS14680 714e160ee4a48f93eef279d1a00612ac 309 Gene3D G3DSA:1.10.150.130 14 109 1.7E-22 T 09-03-2017 IPR023109 Integrase/recombinase, N-terminal BV404_RS14680 714e160ee4a48f93eef279d1a00612ac 309 SUPERFAMILY SSF56349 15 297 3.24E-52 T 09-03-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BV404_RS14680 714e160ee4a48f93eef279d1a00612ac 309 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 16 99 3.5E-21 T 09-03-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 BV404_RS14680 714e160ee4a48f93eef279d1a00612ac 309 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 17 305 1.0E-108 T 09-03-2017 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 BV404_RS14680 714e160ee4a48f93eef279d1a00612ac 309 Gene3D G3DSA:1.10.443.10 122 297 1.1E-49 T 09-03-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 BV404_RS14680 714e160ee4a48f93eef279d1a00612ac 309 Pfam PF00589 Phage integrase family 121 289 1.2E-47 T 09-03-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BV404_RS03780 d44a21862153ed8a752d10873182b7a1 130 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 86 99 - T 09-03-2017 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BV404_RS03780 d44a21862153ed8a752d10873182b7a1 130 SUPERFAMILY SSF81343 8 130 6.98E-32 T 09-03-2017 BV404_RS03780 d44a21862153ed8a752d10873182b7a1 130 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 8 124 3.2E-26 T 09-03-2017 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BV404_RS03780 d44a21862153ed8a752d10873182b7a1 130 Gene3D G3DSA:1.20.1300.10 6 130 2.8E-39 T 09-03-2017 BV404_RS03780 d44a21862153ed8a752d10873182b7a1 130 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 9 127 4.1E-38 T 09-03-2017 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BV404_RS03780 d44a21862153ed8a752d10873182b7a1 130 PIRSF PIRSF000178 2 130 1.3E-30 T 09-03-2017 BV404_RS08170 c86875af474039e92698b6ad7c3d59be 239 SMART SM00345 10 69 6.9E-19 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BV404_RS08170 c86875af474039e92698b6ad7c3d59be 239 Gene3D G3DSA:1.10.10.10 2 74 2.3E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS08170 c86875af474039e92698b6ad7c3d59be 239 SUPERFAMILY SSF64288 96 232 7.69E-40 T 09-03-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain BV404_RS08170 c86875af474039e92698b6ad7c3d59be 239 Pfam PF07702 UTRA domain 92 229 7.2E-34 T 09-03-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 BV404_RS08170 c86875af474039e92698b6ad7c3d59be 239 Gene3D G3DSA:3.40.1410.10 90 225 5.2E-46 T 09-03-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain BV404_RS08170 c86875af474039e92698b6ad7c3d59be 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 1.3E-6 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BV404_RS08170 c86875af474039e92698b6ad7c3d59be 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 1.3E-6 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BV404_RS08170 c86875af474039e92698b6ad7c3d59be 239 SUPERFAMILY SSF46785 2 73 2.89E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS08170 c86875af474039e92698b6ad7c3d59be 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 69 2.7E-17 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BV404_RS08170 c86875af474039e92698b6ad7c3d59be 239 SMART SM00866 92 229 2.0E-32 T 09-03-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 BV404_RS08170 c86875af474039e92698b6ad7c3d59be 239 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 5 234 9.3E-94 T 09-03-2017 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 BV404_RS11530 693f4b6fc592b5ae52696b724ff624b2 310 Pfam PF16199 Radical_SAM C-terminal domain 209 280 1.8E-18 T 09-03-2017 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 BV404_RS11530 693f4b6fc592b5ae52696b724ff624b2 310 SUPERFAMILY SSF102114 13 268 1.31E-49 T 09-03-2017 BV404_RS11530 693f4b6fc592b5ae52696b724ff624b2 310 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 300 2.9E-136 T 09-03-2017 IPR005911 Protein YhcC-like GO:0051536 BV404_RS11530 693f4b6fc592b5ae52696b724ff624b2 310 Gene3D G3DSA:3.80.30.20 23 251 6.4E-35 T 09-03-2017 IPR023404 Radical SAM, alpha/beta horseshoe BV404_RS11530 693f4b6fc592b5ae52696b724ff624b2 310 Pfam PF04055 Radical SAM superfamily 43 201 5.7E-17 T 09-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 BV404_RS11530 693f4b6fc592b5ae52696b724ff624b2 310 SMART SM00729 23 247 2.4E-44 T 09-03-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 BV404_RS01235 a630b34dd1cc83ea978e5757e26e6dd8 447 Pfam PF01523 Putative modulator of DNA gyrase 32 324 2.8E-55 T 09-03-2017 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 BV404_RS01235 a630b34dd1cc83ea978e5757e26e6dd8 447 SUPERFAMILY SSF111283 13 447 3.79E-129 T 09-03-2017 BV404_RS13450 962b0515bfc4d8b10c8d43efae91d324 1072 Pfam PF00535 Glycosyl transferase family 2 801 919 3.9E-20 T 09-03-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BV404_RS13450 962b0515bfc4d8b10c8d43efae91d324 1072 SUPERFAMILY SSF53756 439 790 8.07E-37 T 09-03-2017 BV404_RS13450 962b0515bfc4d8b10c8d43efae91d324 1072 Gene3D G3DSA:3.90.550.10 798 1047 1.2E-37 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases BV404_RS13450 962b0515bfc4d8b10c8d43efae91d324 1072 Pfam PF14307 Glycosyltransferase WbsX 86 424 1.2E-132 T 09-03-2017 IPR032719 Glycosyltransferase WbsX BV404_RS13450 962b0515bfc4d8b10c8d43efae91d324 1072 Gene3D G3DSA:3.40.50.2000 606 757 1.1E-19 T 09-03-2017 BV404_RS13450 962b0515bfc4d8b10c8d43efae91d324 1072 SUPERFAMILY SSF53448 798 1035 1.03E-40 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases BV404_RS13450 962b0515bfc4d8b10c8d43efae91d324 1072 Pfam PF13692 Glycosyl transferases group 1 624 757 3.7E-17 T 09-03-2017 BV404_RS12945 c982c12db61944a6bf549e6ca4396f41 646 SMART SM01340 212 330 3.2E-58 T 09-03-2017 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 BV404_RS12945 c982c12db61944a6bf549e6ca4396f41 646 Pfam PF08676 MutL C terminal dimerisation domain 461 596 5.0E-29 T 09-03-2017 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 BV404_RS12945 c982c12db61944a6bf549e6ca4396f41 646 SMART SM00853 464 605 1.0E-16 T 09-03-2017 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 BV404_RS12945 c982c12db61944a6bf549e6ca4396f41 646 SUPERFAMILY SSF55874 1 204 9.3E-55 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS12945 c982c12db61944a6bf549e6ca4396f41 646 SUPERFAMILY SSF54211 191 330 7.97E-38 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold BV404_RS12945 c982c12db61944a6bf549e6ca4396f41 646 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 310 2.1E-102 T 09-03-2017 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 BV404_RS12945 c982c12db61944a6bf549e6ca4396f41 646 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 212 329 2.8E-39 T 09-03-2017 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 BV404_RS12945 c982c12db61944a6bf549e6ca4396f41 646 SUPERFAMILY SSF118116 460 644 3.14E-40 T 09-03-2017 BV404_RS12945 c982c12db61944a6bf549e6ca4396f41 646 Gene3D G3DSA:3.30.565.10 1 217 4.2E-78 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS12945 c982c12db61944a6bf549e6ca4396f41 646 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 644 25.682 T 09-03-2017 IPR020667 DNA mismatch repair protein, MutL GO:0006298 BV404_RS12945 c982c12db61944a6bf549e6ca4396f41 646 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 119 4.8E-11 T 09-03-2017 BV404_RS12945 c982c12db61944a6bf549e6ca4396f41 646 Gene3D G3DSA:3.30.230.10 219 329 2.5E-39 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BV404_RS12945 c982c12db61944a6bf549e6ca4396f41 646 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 09-03-2017 IPR014762 DNA mismatch repair, conserved site BV404_RS11160 50117be003359560ae531b04dc735b21 371 Pfam PF06725 3D domain 276 352 8.4E-21 T 09-03-2017 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 BV404_RS11160 50117be003359560ae531b04dc735b21 371 SMART SM00925 123 256 7.1E-65 T 09-03-2017 IPR005300 Lytic transglycosylase MltA GO:0004553 BV404_RS11160 50117be003359560ae531b04dc735b21 371 SUPERFAMILY SSF50685 24 354 3.84E-102 T 09-03-2017 IPR009009 RlpA-like protein, double-psi beta-barrel domain BV404_RS11160 50117be003359560ae531b04dc735b21 371 Gene3D G3DSA:2.40.40.10 169 355 5.4E-42 T 09-03-2017 IPR009009 RlpA-like protein, double-psi beta-barrel domain BV404_RS11160 50117be003359560ae531b04dc735b21 371 Gene3D G3DSA:2.40.40.10 72 168 2.4E-10 T 09-03-2017 IPR009009 RlpA-like protein, double-psi beta-barrel domain BV404_RS11160 50117be003359560ae531b04dc735b21 371 Pfam PF03562 MltA specific insert domain 149 256 6.5E-31 T 09-03-2017 IPR005300 Lytic transglycosylase MltA GO:0004553 BV404_RS00375 ac5a19c98bc9996885712581a17d7c66 207 Gene3D G3DSA:3.40.50.300 88 203 7.3E-54 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS00375 ac5a19c98bc9996885712581a17d7c66 207 Gene3D G3DSA:3.40.50.300 2 26 7.3E-54 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS00375 ac5a19c98bc9996885712581a17d7c66 207 SMART SM00072 3 187 2.3E-74 T 09-03-2017 IPR008145 Guanylate kinase/L-type calcium channel beta subunit BV404_RS00375 ac5a19c98bc9996885712581a17d7c66 207 Pfam PF00625 Guanylate kinase 5 185 3.8E-61 T 09-03-2017 IPR008145 Guanylate kinase/L-type calcium channel beta subunit BV404_RS00375 ac5a19c98bc9996885712581a17d7c66 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 09-03-2017 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 BV404_RS00375 ac5a19c98bc9996885712581a17d7c66 207 SUPERFAMILY SSF52540 3 189 3.14E-70 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS00375 ac5a19c98bc9996885712581a17d7c66 207 Gene3D G3DSA:3.30.63.10 35 87 5.2E-29 T 09-03-2017 BV404_RS00375 ac5a19c98bc9996885712581a17d7c66 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 37.875 T 09-03-2017 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 BV404_RS00375 ac5a19c98bc9996885712581a17d7c66 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 6.2E-76 T 09-03-2017 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 BV404_RS03085 9c6372c4927b3419764ce567440e0ac9 883 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 332 764 2.0E-107 T 09-03-2017 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 BV404_RS03085 9c6372c4927b3419764ce567440e0ac9 883 SUPERFAMILY SSF81296 780 881 3.78E-36 T 09-03-2017 IPR014756 Immunoglobulin E-set BV404_RS03085 9c6372c4927b3419764ce567440e0ac9 883 SUPERFAMILY SSF55545 209 331 1.44E-23 T 09-03-2017 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BV404_RS03085 9c6372c4927b3419764ce567440e0ac9 883 Gene3D G3DSA:3.30.379.10 206 329 2.2E-25 T 09-03-2017 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BV404_RS03085 9c6372c4927b3419764ce567440e0ac9 883 Pfam PF03174 Chitobiase/beta-hexosaminidase C-terminal domain 804 879 1.9E-28 T 09-03-2017 BV404_RS03085 9c6372c4927b3419764ce567440e0ac9 883 SUPERFAMILY SSF49384 26 197 9.0E-67 T 09-03-2017 IPR008965 Carbohydrate-binding domain GO:0030246 BV404_RS03085 9c6372c4927b3419764ce567440e0ac9 883 Gene3D G3DSA:2.60.40.320 833 882 1.3E-27 T 09-03-2017 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 BV404_RS03085 9c6372c4927b3419764ce567440e0ac9 883 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 211 329 1.6E-14 T 09-03-2017 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 BV404_RS03085 9c6372c4927b3419764ce567440e0ac9 883 Gene3D G3DSA:3.20.20.80 330 832 2.2E-155 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 BV404_RS03085 9c6372c4927b3419764ce567440e0ac9 883 Gene3D G3DSA:2.60.40.290 26 166 8.9E-60 T 09-03-2017 IPR012291 Cellulose-binding family II/chitobiase, carbohydrate-binding domain GO:0004553|GO:0030247 BV404_RS03085 9c6372c4927b3419764ce567440e0ac9 883 SUPERFAMILY SSF51445 332 772 3.58E-140 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily BV404_RS03085 9c6372c4927b3419764ce567440e0ac9 883 SMART SM01081 34 195 8.3E-93 T 09-03-2017 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 BV404_RS03085 9c6372c4927b3419764ce567440e0ac9 883 Pfam PF03173 Putative carbohydrate binding domain 35 193 5.5E-62 T 09-03-2017 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 BV404_RS03085 9c6372c4927b3419764ce567440e0ac9 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 355 376 3.7E-47 T 09-03-2017 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BV404_RS03085 9c6372c4927b3419764ce567440e0ac9 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 292 312 3.7E-47 T 09-03-2017 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BV404_RS03085 9c6372c4927b3419764ce567440e0ac9 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 326 343 3.7E-47 T 09-03-2017 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BV404_RS03085 9c6372c4927b3419764ce567440e0ac9 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 499 517 3.7E-47 T 09-03-2017 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BV404_RS03085 9c6372c4927b3419764ce567440e0ac9 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 526 539 3.7E-47 T 09-03-2017 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BV404_RS03085 9c6372c4927b3419764ce567440e0ac9 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 746 763 3.7E-47 T 09-03-2017 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BV404_RS03085 9c6372c4927b3419764ce567440e0ac9 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 728 744 3.7E-47 T 09-03-2017 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BV404_RS03085 9c6372c4927b3419764ce567440e0ac9 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 432 449 3.7E-47 T 09-03-2017 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BV404_RS03540 dec18b07fad16c004b60957e171d56be 153 SUPERFAMILY SSF160214 61 149 3.27E-22 T 09-03-2017 IPR005186 FlaG protein BV404_RS03540 dec18b07fad16c004b60957e171d56be 153 Pfam PF03646 FlaG protein 52 150 4.7E-23 T 09-03-2017 IPR005186 FlaG protein BV404_RS03540 dec18b07fad16c004b60957e171d56be 153 Gene3D G3DSA:3.30.160.170 59 148 6.3E-24 T 09-03-2017 IPR005186 FlaG protein BV404_RS14285 b757d625d882282e26f64a2c2d5aeb94 207 SUPERFAMILY SSF54980 139 201 2.45E-9 T 09-03-2017 IPR009022 Elongation factor G, III-V domain BV404_RS14285 b757d625d882282e26f64a2c2d5aeb94 207 Gene3D G3DSA:3.30.70.240 139 202 9.2E-11 T 09-03-2017 IPR000640 Translation elongation factor EFG, V domain BV404_RS14285 b757d625d882282e26f64a2c2d5aeb94 207 SUPERFAMILY SSF54211 4 134 4.93E-43 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold BV404_RS14285 b757d625d882282e26f64a2c2d5aeb94 207 Pfam PF01205 Uncharacterized protein family UPF0029 20 127 2.3E-24 T 09-03-2017 IPR001498 Impact, N-terminal BV404_RS14285 b757d625d882282e26f64a2c2d5aeb94 207 Pfam PF09186 Domain of unknown function (DUF1949) 143 196 8.9E-11 T 09-03-2017 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal BV404_RS14285 b757d625d882282e26f64a2c2d5aeb94 207 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 82 111 - T 09-03-2017 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site BV404_RS14285 b757d625d882282e26f64a2c2d5aeb94 207 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 5 198 4.7E-64 T 09-03-2017 IPR015796 Impact family, bacterial/archaeal BV404_RS14285 b757d625d882282e26f64a2c2d5aeb94 207 Gene3D G3DSA:3.30.230.30 6 135 3.6E-42 T 09-03-2017 IPR001498 Impact, N-terminal BV404_RS02770 e683829d8c629465e536addb7ec3493e 490 PIRSF PIRSF016599 5 489 1.3E-215 T 09-03-2017 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 BV404_RS02770 e683829d8c629465e536addb7ec3493e 490 Gene3D G3DSA:3.40.630.10 6 185 1.4E-105 T 09-03-2017 BV404_RS02770 e683829d8c629465e536addb7ec3493e 490 Gene3D G3DSA:3.40.630.10 401 487 1.4E-105 T 09-03-2017 BV404_RS02770 e683829d8c629465e536addb7ec3493e 490 Pfam PF01546 Peptidase family M20/M25/M40 77 471 2.6E-19 T 09-03-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 BV404_RS02770 e683829d8c629465e536addb7ec3493e 490 SUPERFAMILY SSF53187 401 486 2.88E-60 T 09-03-2017 BV404_RS02770 e683829d8c629465e536addb7ec3493e 490 SUPERFAMILY SSF53187 16 186 2.88E-60 T 09-03-2017 BV404_RS02770 e683829d8c629465e536addb7ec3493e 490 PRINTS PR00934 X-His dipeptidase (M25) signature 210 227 1.1E-89 T 09-03-2017 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 BV404_RS02770 e683829d8c629465e536addb7ec3493e 490 PRINTS PR00934 X-His dipeptidase (M25) signature 105 123 1.1E-89 T 09-03-2017 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 BV404_RS02770 e683829d8c629465e536addb7ec3493e 490 PRINTS PR00934 X-His dipeptidase (M25) signature 84 103 1.1E-89 T 09-03-2017 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 BV404_RS02770 e683829d8c629465e536addb7ec3493e 490 PRINTS PR00934 X-His dipeptidase (M25) signature 454 476 1.1E-89 T 09-03-2017 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 BV404_RS02770 e683829d8c629465e536addb7ec3493e 490 PRINTS PR00934 X-His dipeptidase (M25) signature 432 448 1.1E-89 T 09-03-2017 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 BV404_RS02770 e683829d8c629465e536addb7ec3493e 490 PRINTS PR00934 X-His dipeptidase (M25) signature 255 274 1.1E-89 T 09-03-2017 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 BV404_RS02770 e683829d8c629465e536addb7ec3493e 490 PRINTS PR00934 X-His dipeptidase (M25) signature 367 385 1.1E-89 T 09-03-2017 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 BV404_RS02770 e683829d8c629465e536addb7ec3493e 490 PRINTS PR00934 X-His dipeptidase (M25) signature 163 181 1.1E-89 T 09-03-2017 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 BV404_RS02770 e683829d8c629465e536addb7ec3493e 490 PRINTS PR00934 X-His dipeptidase (M25) signature 139 156 1.1E-89 T 09-03-2017 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 BV404_RS02770 e683829d8c629465e536addb7ec3493e 490 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 13 486 6.9E-181 T 09-03-2017 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 BV404_RS02770 e683829d8c629465e536addb7ec3493e 490 Pfam PF07687 Peptidase dimerisation domain 211 295 4.1E-8 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain BV404_RS00780 e8e07b3cd8a61f185db0cce5a378578e 172 PRINTS PR01100 Shikimate kinase family signature 7 22 4.0E-29 T 09-03-2017 BV404_RS00780 e8e07b3cd8a61f185db0cce5a378578e 172 PRINTS PR01100 Shikimate kinase family signature 77 86 4.0E-29 T 09-03-2017 BV404_RS00780 e8e07b3cd8a61f185db0cce5a378578e 172 PRINTS PR01100 Shikimate kinase family signature 31 44 4.0E-29 T 09-03-2017 BV404_RS00780 e8e07b3cd8a61f185db0cce5a378578e 172 PRINTS PR01100 Shikimate kinase family signature 98 115 4.0E-29 T 09-03-2017 BV404_RS00780 e8e07b3cd8a61f185db0cce5a378578e 172 PRINTS PR01100 Shikimate kinase family signature 59 67 4.0E-29 T 09-03-2017 BV404_RS00780 e8e07b3cd8a61f185db0cce5a378578e 172 SUPERFAMILY SSF52540 4 169 2.13E-32 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS00780 e8e07b3cd8a61f185db0cce5a378578e 172 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 29.587 T 09-03-2017 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 BV404_RS00780 e8e07b3cd8a61f185db0cce5a378578e 172 Pfam PF01202 Shikimate kinase 13 169 9.4E-58 T 09-03-2017 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 BV404_RS00780 e8e07b3cd8a61f185db0cce5a378578e 172 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 09-03-2017 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 BV404_RS00780 e8e07b3cd8a61f185db0cce5a378578e 172 Gene3D G3DSA:3.40.50.300 2 171 8.4E-59 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS01595 f966bd6adbbb5a42c83bc1306770e3db 200 Pfam PF00694 Aconitase C-terminal domain 1 125 1.0E-39 T 09-03-2017 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 BV404_RS01595 f966bd6adbbb5a42c83bc1306770e3db 200 SUPERFAMILY SSF52016 2 196 1.08E-60 T 09-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel BV404_RS01595 f966bd6adbbb5a42c83bc1306770e3db 200 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 188 3.8E-98 T 09-03-2017 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 BV404_RS01595 f966bd6adbbb5a42c83bc1306770e3db 200 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 199 44.533 T 09-03-2017 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 BV404_RS01595 f966bd6adbbb5a42c83bc1306770e3db 200 Gene3D G3DSA:3.20.19.10 1 194 9.9E-50 T 09-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel BV404_RS07955 feceac2333551dacffa7668659db7b31 331 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 3 329 30.468 T 09-03-2017 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 BV404_RS07955 feceac2333551dacffa7668659db7b31 331 Gene3D G3DSA:1.10.3470.10 8 327 2.7E-94 T 09-03-2017 IPR029022 ABC transporter, BtuC-like BV404_RS07955 feceac2333551dacffa7668659db7b31 331 SUPERFAMILY SSF81345 7 326 2.22E-79 T 09-03-2017 IPR029022 ABC transporter, BtuC-like BV404_RS07955 feceac2333551dacffa7668659db7b31 331 Pfam PF01032 FecCD transport family 19 326 7.8E-82 T 09-03-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 BV404_RS02970 891306ae6f03ab980e295a51e05739ed 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 50.867 T 09-03-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 BV404_RS02970 891306ae6f03ab980e295a51e05739ed 319 Gene3D G3DSA:3.90.226.10 58 274 2.8E-49 T 09-03-2017 IPR029045 ClpP/crotonase-like domain BV404_RS02970 891306ae6f03ab980e295a51e05739ed 319 SUPERFAMILY SSF52096 5 318 4.21E-104 T 09-03-2017 IPR029045 ClpP/crotonase-like domain BV404_RS02970 891306ae6f03ab980e295a51e05739ed 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 6 151 2.0E-64 T 09-03-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 BV404_RS02970 891306ae6f03ab980e295a51e05739ed 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 5.1E-164 T 09-03-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 BV404_RS02970 891306ae6f03ab980e295a51e05739ed 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 2.3E-48 T 09-03-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 BV404_RS02970 891306ae6f03ab980e295a51e05739ed 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 2.3E-48 T 09-03-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 BV404_RS02970 891306ae6f03ab980e295a51e05739ed 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 2.3E-48 T 09-03-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 BV404_RS02970 891306ae6f03ab980e295a51e05739ed 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 2.3E-48 T 09-03-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 BV404_RS02970 891306ae6f03ab980e295a51e05739ed 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 2.3E-48 T 09-03-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 BV404_RS02970 891306ae6f03ab980e295a51e05739ed 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 2.3E-48 T 09-03-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 BV404_RS11280 5c3de65cdd508edde01783237d91e828 486 Gene3D G3DSA:3.40.50.300 233 464 1.3E-66 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11280 5c3de65cdd508edde01783237d91e828 486 Pfam PF00437 Type II/IV secretion system protein 135 412 3.6E-86 T 09-03-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 BV404_RS11280 5c3de65cdd508edde01783237d91e828 486 Gene3D G3DSA:3.30.450.90 132 229 1.7E-37 T 09-03-2017 BV404_RS11280 5c3de65cdd508edde01783237d91e828 486 SUPERFAMILY SSF52540 118 451 4.02E-65 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS14375 f96fb5b3ec7716c052c9fe75e5145ef6 254 SUPERFAMILY SSF110399 1 236 1.96E-85 T 09-03-2017 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 BV404_RS14375 f96fb5b3ec7716c052c9fe75e5145ef6 254 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 43.495 T 09-03-2017 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 BV404_RS14375 f96fb5b3ec7716c052c9fe75e5145ef6 254 Gene3D G3DSA:3.20.20.70 1 252 7.8E-63 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS14375 f96fb5b3ec7716c052c9fe75e5145ef6 254 Pfam PF05690 Thiazole biosynthesis protein ThiG 4 247 1.6E-112 T 09-03-2017 BV404_RS13100 1b6f3d5bb8b9872be9db174aa4afb416 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 1.6E-23 T 09-03-2017 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 BV404_RS13100 1b6f3d5bb8b9872be9db174aa4afb416 142 SMART SM00649 9 141 1.0E-83 T 09-03-2017 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 BV404_RS13100 1b6f3d5bb8b9872be9db174aa4afb416 142 SUPERFAMILY SSF46906 68 141 3.01E-25 T 09-03-2017 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 BV404_RS13100 1b6f3d5bb8b9872be9db174aa4afb416 142 SUPERFAMILY SSF54747 3 73 7.98E-30 T 09-03-2017 IPR020784 Ribosomal protein L11, N-terminal BV404_RS13100 1b6f3d5bb8b9872be9db174aa4afb416 142 Gene3D G3DSA:3.30.1550.10 2 72 5.5E-38 T 09-03-2017 IPR020784 Ribosomal protein L11, N-terminal BV404_RS13100 1b6f3d5bb8b9872be9db174aa4afb416 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 1.1E-64 T 09-03-2017 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS13100 1b6f3d5bb8b9872be9db174aa4afb416 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 09-03-2017 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS13100 1b6f3d5bb8b9872be9db174aa4afb416 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 5.0E-16 T 09-03-2017 BV404_RS13100 1b6f3d5bb8b9872be9db174aa4afb416 142 Gene3D G3DSA:1.10.10.250 73 141 8.6E-30 T 09-03-2017 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 BV404_RS13100 1b6f3d5bb8b9872be9db174aa4afb416 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 3.2E-29 T 09-03-2017 IPR020784 Ribosomal protein L11, N-terminal BV404_RS13100 1b6f3d5bb8b9872be9db174aa4afb416 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.679 T 09-03-2017 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 BV404_RS05890 59e2376dea2750cf17999e49732d83e1 77 Gene3D G3DSA:1.10.290.10 34 68 6.0E-4 T 09-03-2017 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 BV404_RS05890 59e2376dea2750cf17999e49732d83e1 77 TIGRFAM TIGR02647 DNA: TIGR02647 family protein 1 77 9.3E-36 T 09-03-2017 IPR013468 Conserved hypothetical protein CHP02647 BV404_RS05890 59e2376dea2750cf17999e49732d83e1 77 Pfam PF06146 Phosphate-starvation-inducible E 9 68 1.2E-7 T 09-03-2017 IPR020948 Phosphate-starvation-induced PsiE-like BV404_RS02470 de2db4bee4cbfcce1b9d5ea47924707c 494 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 328 436 2.2E-21 T 09-03-2017 IPR025299 CstA, C-terminal domain BV404_RS02470 de2db4bee4cbfcce1b9d5ea47924707c 494 Pfam PF02554 Carbon starvation protein CstA 5 144 1.6E-32 T 09-03-2017 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 BV404_RS02470 de2db4bee4cbfcce1b9d5ea47924707c 494 Pfam PF02554 Carbon starvation protein CstA 148 293 5.1E-20 T 09-03-2017 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 BV404_RS13270 56b4090ba45abac4b938592390596275 607 SMART SM00100 11 128 0.0066 T 09-03-2017 IPR000595 Cyclic nucleotide-binding domain BV404_RS13270 56b4090ba45abac4b938592390596275 607 Pfam PF00027 Cyclic nucleotide-binding domain 31 113 1.1E-11 T 09-03-2017 IPR000595 Cyclic nucleotide-binding domain BV404_RS13270 56b4090ba45abac4b938592390596275 607 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 470 603 8.9E-38 T 09-03-2017 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding BV404_RS13270 56b4090ba45abac4b938592390596275 607 Gene3D G3DSA:2.60.120.10 8 128 3.2E-14 T 09-03-2017 IPR014710 RmlC-like jelly roll fold BV404_RS13270 56b4090ba45abac4b938592390596275 607 Pfam PF03445 Putative nucleotidyltransferase DUF294 301 430 1.2E-40 T 09-03-2017 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 BV404_RS13270 56b4090ba45abac4b938592390596275 607 SUPERFAMILY SSF51206 8 128 2.62E-17 T 09-03-2017 IPR018490 Cyclic nucleotide-binding-like BV404_RS13270 56b4090ba45abac4b938592390596275 607 Pfam PF00571 CBS domain 222 274 0.0035 T 09-03-2017 IPR000644 CBS domain BV404_RS13270 56b4090ba45abac4b938592390596275 607 SUPERFAMILY SSF54631 145 275 9.15E-17 T 09-03-2017 BV404_RS13270 56b4090ba45abac4b938592390596275 607 Gene3D G3DSA:3.10.580.10 155 276 6.7E-16 T 09-03-2017 BV404_RS02180 b08db85fac7ed0907178caac06cb2c62 395 Gene3D G3DSA:3.40.50.620 11 227 3.1E-83 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS02180 b08db85fac7ed0907178caac06cb2c62 395 Pfam PF00579 tRNA synthetases class I (W and Y) 30 317 5.9E-80 T 09-03-2017 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 BV404_RS02180 b08db85fac7ed0907178caac06cb2c62 395 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 4 395 5.4E-128 T 09-03-2017 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 BV404_RS02180 b08db85fac7ed0907178caac06cb2c62 395 Gene3D G3DSA:3.10.290.10 327 394 1.9E-22 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 BV404_RS02180 b08db85fac7ed0907178caac06cb2c62 395 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 09-03-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BV404_RS02180 b08db85fac7ed0907178caac06cb2c62 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 1.5E-25 T 09-03-2017 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 BV404_RS02180 b08db85fac7ed0907178caac06cb2c62 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 1.5E-25 T 09-03-2017 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 BV404_RS02180 b08db85fac7ed0907178caac06cb2c62 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 1.5E-25 T 09-03-2017 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 BV404_RS02180 b08db85fac7ed0907178caac06cb2c62 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 1.5E-25 T 09-03-2017 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 BV404_RS02180 b08db85fac7ed0907178caac06cb2c62 395 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 394 48.349 T 09-03-2017 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 BV404_RS02180 b08db85fac7ed0907178caac06cb2c62 395 SUPERFAMILY SSF55174 297 394 3.14E-15 T 09-03-2017 BV404_RS02180 b08db85fac7ed0907178caac06cb2c62 395 Gene3D G3DSA:1.10.240.10 228 326 1.3E-37 T 09-03-2017 BV404_RS02180 b08db85fac7ed0907178caac06cb2c62 395 SUPERFAMILY SSF52374 6 315 1.53E-97 T 09-03-2017 BV404_RS02890 7450797eb6d531da9f14770c5a267f11 253 Gene3D G3DSA:3.40.50.10490 34 110 4.2E-65 T 09-03-2017 BV404_RS02890 7450797eb6d531da9f14770c5a267f11 253 Gene3D G3DSA:3.40.50.10490 169 242 4.2E-65 T 09-03-2017 BV404_RS02890 7450797eb6d531da9f14770c5a267f11 253 SUPERFAMILY SSF52313 17 241 1.7E-95 T 09-03-2017 IPR023591 Ribosomal protein S2, flavodoxin-like domain BV404_RS02890 7450797eb6d531da9f14770c5a267f11 253 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 17 28 - T 09-03-2017 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 BV404_RS02890 7450797eb6d531da9f14770c5a267f11 253 Pfam PF00318 Ribosomal protein S2 20 235 1.8E-93 T 09-03-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS02890 7450797eb6d531da9f14770c5a267f11 253 PRINTS PR00395 Ribosomal protein S2 signature 98 115 6.0E-38 T 09-03-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS02890 7450797eb6d531da9f14770c5a267f11 253 PRINTS PR00395 Ribosomal protein S2 signature 186 197 6.0E-38 T 09-03-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS02890 7450797eb6d531da9f14770c5a267f11 253 PRINTS PR00395 Ribosomal protein S2 signature 207 221 6.0E-38 T 09-03-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS02890 7450797eb6d531da9f14770c5a267f11 253 PRINTS PR00395 Ribosomal protein S2 signature 48 57 6.0E-38 T 09-03-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS02890 7450797eb6d531da9f14770c5a267f11 253 PRINTS PR00395 Ribosomal protein S2 signature 169 186 6.0E-38 T 09-03-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS02890 7450797eb6d531da9f14770c5a267f11 253 PRINTS PR00395 Ribosomal protein S2 signature 17 35 6.0E-38 T 09-03-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS02890 7450797eb6d531da9f14770c5a267f11 253 Gene3D G3DSA:1.10.287.610 111 163 3.8E-27 T 09-03-2017 BV404_RS02890 7450797eb6d531da9f14770c5a267f11 253 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 14 237 2.8E-107 T 09-03-2017 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 BV404_RS02890 7450797eb6d531da9f14770c5a267f11 253 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 13 236 41.109 T 09-03-2017 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 BV404_RS02890 7450797eb6d531da9f14770c5a267f11 253 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 169 193 - T 09-03-2017 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 BV404_RS01650 290729da352ff2da75276162e1674e54 409 SUPERFAMILY SSF55021 334 408 3.82E-18 T 09-03-2017 BV404_RS01650 290729da352ff2da75276162e1674e54 409 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 326 1.3E-37 T 09-03-2017 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 BV404_RS01650 290729da352ff2da75276162e1674e54 409 SUPERFAMILY SSF52283 7 136 4.89E-49 T 09-03-2017 BV404_RS01650 290729da352ff2da75276162e1674e54 409 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 2.4E-54 T 09-03-2017 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 BV404_RS01650 290729da352ff2da75276162e1674e54 409 Gene3D G3DSA:3.40.50.720 8 119 7.6E-37 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS01650 290729da352ff2da75276162e1674e54 409 SUPERFAMILY SSF51735 108 295 4.51E-59 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS01650 290729da352ff2da75276162e1674e54 409 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 09-03-2017 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site BV404_RS01650 290729da352ff2da75276162e1674e54 409 Gene3D G3DSA:3.30.70.260 324 408 9.8E-30 T 09-03-2017 BV404_RS01650 290729da352ff2da75276162e1674e54 409 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 09-03-2017 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 BV404_RS01650 290729da352ff2da75276162e1674e54 409 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 09-03-2017 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site BV404_RS01650 290729da352ff2da75276162e1674e54 409 Gene3D G3DSA:3.40.50.720 120 297 3.0E-65 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS08145 6805fa38c8d5b2249c85fc102c0d10cd 698 SMART SM00052 439 680 9.6E-74 T 09-03-2017 IPR001633 EAL domain BV404_RS08145 6805fa38c8d5b2249c85fc102c0d10cd 698 Pfam PF02378 Phosphotransferase system, EIIC 32 333 9.4E-22 T 09-03-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BV404_RS08145 6805fa38c8d5b2249c85fc102c0d10cd 698 Pfam PF00563 EAL domain 451 674 1.5E-64 T 09-03-2017 IPR001633 EAL domain BV404_RS08145 6805fa38c8d5b2249c85fc102c0d10cd 698 Gene3D G3DSA:3.20.20.450 451 687 6.5E-75 T 09-03-2017 IPR001633 EAL domain BV404_RS08145 6805fa38c8d5b2249c85fc102c0d10cd 698 SUPERFAMILY SSF141868 451 687 1.31E-68 T 09-03-2017 IPR001633 EAL domain BV404_RS00520 7efba054d9e95f9642790ac007299921 295 Gene3D G3DSA:3.20.20.220 10 293 1.5E-105 T 09-03-2017 IPR029041 FAD-linked oxidoreductase-like BV404_RS00520 7efba054d9e95f9642790ac007299921 295 SUPERFAMILY SSF51730 21 293 2.35E-95 T 09-03-2017 IPR029041 FAD-linked oxidoreductase-like BV404_RS00520 7efba054d9e95f9642790ac007299921 295 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 24 289 5.7E-103 T 09-03-2017 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 BV404_RS00520 7efba054d9e95f9642790ac007299921 295 Pfam PF02219 Methylenetetrahydrofolate reductase 16 290 8.8E-102 T 09-03-2017 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 BV404_RS01655 925d83e8c23283ccf58ade85576222de 217 Gene3D G3DSA:3.40.50.1360 1 136 4.8E-57 T 09-03-2017 BV404_RS01655 925d83e8c23283ccf58ade85576222de 217 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 214 2.0E-67 T 09-03-2017 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 BV404_RS01655 925d83e8c23283ccf58ade85576222de 217 SUPERFAMILY SSF75445 127 198 7.06E-24 T 09-03-2017 BV404_RS01655 925d83e8c23283ccf58ade85576222de 217 Gene3D G3DSA:3.30.70.260 137 196 6.9E-30 T 09-03-2017 BV404_RS01655 925d83e8c23283ccf58ade85576222de 217 SUPERFAMILY SSF100950 1 146 4.28E-47 T 09-03-2017 BV404_RS01655 925d83e8c23283ccf58ade85576222de 217 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 33.36 T 09-03-2017 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 BV404_RS01655 925d83e8c23283ccf58ade85576222de 217 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 1.0E-57 T 09-03-2017 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 BV404_RS09850 3b41c17e653130c4652de5a73d264621 504 Pfam PF13522 Glutamine amidotransferase domain 64 206 1.3E-17 T 09-03-2017 BV404_RS09850 3b41c17e653130c4652de5a73d264621 504 PIRSF PIRSF000485 1 480 1.4E-168 T 09-03-2017 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 BV404_RS09850 3b41c17e653130c4652de5a73d264621 504 Gene3D G3DSA:3.60.20.10 2 257 9.2E-64 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal BV404_RS09850 3b41c17e653130c4652de5a73d264621 504 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 463 1.9E-165 T 09-03-2017 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 BV404_RS09850 3b41c17e653130c4652de5a73d264621 504 Pfam PF00156 Phosphoribosyl transferase domain 292 389 1.1E-6 T 09-03-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 BV404_RS09850 3b41c17e653130c4652de5a73d264621 504 SUPERFAMILY SSF53271 249 482 1.27E-70 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like BV404_RS09850 3b41c17e653130c4652de5a73d264621 504 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 465 44.393 T 09-03-2017 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 BV404_RS09850 3b41c17e653130c4652de5a73d264621 504 Gene3D G3DSA:3.40.50.2020 270 443 6.8E-47 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like BV404_RS09850 3b41c17e653130c4652de5a73d264621 504 SUPERFAMILY SSF56235 2 256 1.89E-70 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal BV404_RS12835 172c44b6db02fe4c0a08641ec7d7996e 75 Pfam PF01084 Ribosomal protein S18 19 68 2.4E-25 T 09-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS12835 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.6E-18 T 09-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS12835 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.6E-18 T 09-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS12835 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.6E-18 T 09-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS12835 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.6E-18 T 09-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS12835 172c44b6db02fe4c0a08641ec7d7996e 75 Gene3D G3DSA:4.10.640.10 8 74 5.2E-33 T 09-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS12835 172c44b6db02fe4c0a08641ec7d7996e 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 73 9.0E-24 T 09-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS12835 172c44b6db02fe4c0a08641ec7d7996e 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 09-03-2017 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS12835 172c44b6db02fe4c0a08641ec7d7996e 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.42 T 09-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS12835 172c44b6db02fe4c0a08641ec7d7996e 75 SUPERFAMILY SSF46911 3 74 2.49E-29 T 09-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS12835 172c44b6db02fe4c0a08641ec7d7996e 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 73 6.2E-38 T 09-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS04365 5600f21bccacda32aebdbd814c56e795 356 Pfam PF08496 Peptidase family S49 N-terminal 5 165 4.7E-55 T 09-03-2017 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 BV404_RS04365 5600f21bccacda32aebdbd814c56e795 356 Pfam PF01343 Peptidase family S49 168 316 2.3E-46 T 09-03-2017 IPR002142 Peptidase S49 GO:0006508|GO:0008233 BV404_RS04365 5600f21bccacda32aebdbd814c56e795 356 Gene3D G3DSA:3.90.226.10 278 313 3.2E-35 T 09-03-2017 IPR029045 ClpP/crotonase-like domain BV404_RS04365 5600f21bccacda32aebdbd814c56e795 356 Gene3D G3DSA:3.90.226.10 105 212 3.2E-35 T 09-03-2017 IPR029045 ClpP/crotonase-like domain BV404_RS04365 5600f21bccacda32aebdbd814c56e795 356 SUPERFAMILY SSF52096 106 216 1.07E-28 T 09-03-2017 IPR029045 ClpP/crotonase-like domain BV404_RS04365 5600f21bccacda32aebdbd814c56e795 356 SUPERFAMILY SSF52096 247 306 1.07E-28 T 09-03-2017 IPR029045 ClpP/crotonase-like domain BV404_RS03475 15421f4de37e13cb3a6b24a9ee6d6c48 378 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 99 137 - T 09-03-2017 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 BV404_RS03475 15421f4de37e13cb3a6b24a9ee6d6c48 378 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 7 375 3.7E-184 T 09-03-2017 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 BV404_RS03475 15421f4de37e13cb3a6b24a9ee6d6c48 378 SUPERFAMILY SSF53187 6 180 2.38E-66 T 09-03-2017 BV404_RS03475 15421f4de37e13cb3a6b24a9ee6d6c48 378 SUPERFAMILY SSF53187 294 376 2.38E-66 T 09-03-2017 BV404_RS03475 15421f4de37e13cb3a6b24a9ee6d6c48 378 Gene3D G3DSA:3.30.70.360 190 291 6.9E-35 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain BV404_RS03475 15421f4de37e13cb3a6b24a9ee6d6c48 378 Pfam PF01546 Peptidase family M20/M25/M40 64 374 1.9E-45 T 09-03-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 BV404_RS03475 15421f4de37e13cb3a6b24a9ee6d6c48 378 Gene3D G3DSA:3.40.630.10 318 376 2.8E-74 T 09-03-2017 BV404_RS03475 15421f4de37e13cb3a6b24a9ee6d6c48 378 Gene3D G3DSA:3.40.630.10 4 189 2.8E-74 T 09-03-2017 BV404_RS03475 15421f4de37e13cb3a6b24a9ee6d6c48 378 Pfam PF07687 Peptidase dimerisation domain 177 284 5.8E-24 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain BV404_RS03475 15421f4de37e13cb3a6b24a9ee6d6c48 378 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 4 377 52.677 T 09-03-2017 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 BV404_RS03475 15421f4de37e13cb3a6b24a9ee6d6c48 378 SUPERFAMILY SSF55031 181 290 2.54E-29 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain BV404_RS07480 8b29de9f74f6db1c428855a81bba50bc 195 Gene3D G3DSA:3.40.50.360 1 194 1.1E-62 T 09-03-2017 IPR029039 Flavoprotein-like domain BV404_RS07480 8b29de9f74f6db1c428855a81bba50bc 195 SUPERFAMILY SSF52218 1 193 6.71E-52 T 09-03-2017 IPR029039 Flavoprotein-like domain BV404_RS07480 8b29de9f74f6db1c428855a81bba50bc 195 Pfam PF02525 Flavodoxin-like fold 3 192 5.6E-44 T 09-03-2017 IPR003680 Flavodoxin-like fold BV404_RS07480 8b29de9f74f6db1c428855a81bba50bc 195 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 194 31.514 T 09-03-2017 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 BV404_RS09115 d17ea2ce4c960aabe3a0539baaf2a253 374 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 352 2.3E-82 T 09-03-2017 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain BV404_RS09115 d17ea2ce4c960aabe3a0539baaf2a253 374 SUPERFAMILY SSF51735 137 303 6.7E-49 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS09115 d17ea2ce4c960aabe3a0539baaf2a253 374 Gene3D G3DSA:3.40.50.1770 203 369 6.1E-30 T 09-03-2017 BV404_RS09115 d17ea2ce4c960aabe3a0539baaf2a253 374 SUPERFAMILY SSF52283 305 360 1.87E-67 T 09-03-2017 BV404_RS09115 d17ea2ce4c960aabe3a0539baaf2a253 374 SUPERFAMILY SSF52283 1 137 1.87E-67 T 09-03-2017 BV404_RS09115 d17ea2ce4c960aabe3a0539baaf2a253 374 SMART SM01002 149 297 6.1E-88 T 09-03-2017 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain BV404_RS09115 d17ea2ce4c960aabe3a0539baaf2a253 374 SMART SM01003 4 137 4.8E-79 T 09-03-2017 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal BV404_RS09115 d17ea2ce4c960aabe3a0539baaf2a253 374 Gene3D G3DSA:3.40.50.1770 3 178 6.7E-62 T 09-03-2017 BV404_RS09115 d17ea2ce4c960aabe3a0539baaf2a253 374 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 8.4E-46 T 09-03-2017 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal BV404_RS09115 d17ea2ce4c960aabe3a0539baaf2a253 374 Gene3D G3DSA:3.50.50.60 179 202 1.4E-7 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS09115 d17ea2ce4c960aabe3a0539baaf2a253 374 PIRSF PIRSF000183 1 371 2.2E-154 T 09-03-2017 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 BV404_RS09115 d17ea2ce4c960aabe3a0539baaf2a253 374 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 370 9.3E-153 T 09-03-2017 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 BV404_RS02250 e4de94c7c45b245e373356a1d2c9d7c9 151 Gene3D G3DSA:2.30.30.180 88 148 1.1E-11 T 09-03-2017 IPR028998 Ribosome maturation factor RimP, C-terminal BV404_RS02250 e4de94c7c45b245e373356a1d2c9d7c9 151 Gene3D G3DSA:3.30.300.70 2 80 4.8E-33 T 09-03-2017 IPR028989 Ribosome maturation factor RimP, N-terminal BV404_RS02250 e4de94c7c45b245e373356a1d2c9d7c9 151 SUPERFAMILY SSF75420 2 83 4.97E-26 T 09-03-2017 IPR028989 Ribosome maturation factor RimP, N-terminal BV404_RS02250 e4de94c7c45b245e373356a1d2c9d7c9 151 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 24.042 T 09-03-2017 IPR003728 Ribosome maturation factor RimP GO:0042274 BV404_RS02250 e4de94c7c45b245e373356a1d2c9d7c9 151 SUPERFAMILY SSF74942 84 151 2.09E-16 T 09-03-2017 IPR028998 Ribosome maturation factor RimP, C-terminal BV404_RS02250 e4de94c7c45b245e373356a1d2c9d7c9 151 Pfam PF02576 Putative ribosome maturation factor RimP 13 147 1.4E-48 T 09-03-2017 IPR003728 Ribosome maturation factor RimP GO:0042274 BV404_RS04325 b462c169cfd16d60bb58fa9fec83b259 395 Pfam PF01734 Patatin-like phospholipase 29 198 1.9E-14 T 09-03-2017 IPR002641 Patatin/Phospholipase A2-related GO:0006629 BV404_RS04325 b462c169cfd16d60bb58fa9fec83b259 395 SUPERFAMILY SSF52151 25 277 1.54E-30 T 09-03-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 BV404_RS14215 a909fcd6bbd97c2a817942ce1a3b8a03 84 Gene3D G3DSA:1.20.20.10 2 78 1.8E-32 T 09-03-2017 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 BV404_RS14215 a909fcd6bbd97c2a817942ce1a3b8a03 84 Pfam PF00137 ATP synthase subunit C 10 72 1.0E-10 T 09-03-2017 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 BV404_RS14215 a909fcd6bbd97c2a817942ce1a3b8a03 84 PRINTS PR00124 ATP synthase C subunit signature 11 30 1.7E-6 T 09-03-2017 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 BV404_RS14215 a909fcd6bbd97c2a817942ce1a3b8a03 84 PRINTS PR00124 ATP synthase C subunit signature 32 47 1.7E-6 T 09-03-2017 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 BV404_RS14215 a909fcd6bbd97c2a817942ce1a3b8a03 84 PRINTS PR00124 ATP synthase C subunit signature 49 74 1.7E-6 T 09-03-2017 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 BV404_RS14215 a909fcd6bbd97c2a817942ce1a3b8a03 84 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 19 76 1.2E-30 T 09-03-2017 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 BV404_RS14215 a909fcd6bbd97c2a817942ce1a3b8a03 84 SUPERFAMILY SSF81333 3 78 1.7E-19 T 09-03-2017 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 BV404_RS14215 a909fcd6bbd97c2a817942ce1a3b8a03 84 Hamap MF_01396 ATP synthase subunit c [atpH]. 8 76 14.624 T 09-03-2017 BV404_RS14215 a909fcd6bbd97c2a817942ce1a3b8a03 84 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 09-03-2017 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210 BV404_RS13700 c405a886068b5bf6505748bb16ddcc55 611 Gene3D G3DSA:1.10.10.10 348 517 2.2E-63 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS13700 c405a886068b5bf6505748bb16ddcc55 611 SMART SM00487 25 221 6.4E-28 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain BV404_RS13700 c405a886068b5bf6505748bb16ddcc55 611 Pfam PF00570 HRDC domain 537 603 5.5E-22 T 09-03-2017 IPR002121 HRDC domain GO:0003676|GO:0005622 BV404_RS13700 c405a886068b5bf6505748bb16ddcc55 611 Gene3D G3DSA:3.40.50.300 17 206 5.9E-56 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS13700 c405a886068b5bf6505748bb16ddcc55 611 Pfam PF00270 DEAD/DEAH box helicase 31 188 1.3E-17 T 09-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BV404_RS13700 c405a886068b5bf6505748bb16ddcc55 611 SMART SM00341 533 609 5.5E-22 T 09-03-2017 IPR002121 HRDC domain GO:0003676|GO:0005622 BV404_RS13700 c405a886068b5bf6505748bb16ddcc55 611 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 17 606 4.1E-253 T 09-03-2017 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 BV404_RS13700 c405a886068b5bf6505748bb16ddcc55 611 Pfam PF16124 RecQ zinc-binding 346 407 3.5E-18 T 09-03-2017 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain BV404_RS13700 c405a886068b5bf6505748bb16ddcc55 611 Gene3D G3DSA:3.40.50.300 210 347 4.8E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS13700 c405a886068b5bf6505748bb16ddcc55 611 SUPERFAMILY SSF47819 534 608 5.01E-26 T 09-03-2017 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 BV404_RS13700 c405a886068b5bf6505748bb16ddcc55 611 SUPERFAMILY SSF52540 211 458 2.77E-64 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS13700 c405a886068b5bf6505748bb16ddcc55 611 SUPERFAMILY SSF52540 16 203 6.06E-42 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS13700 c405a886068b5bf6505748bb16ddcc55 611 Gene3D G3DSA:1.10.150.80 534 605 2.9E-23 T 09-03-2017 IPR002121 HRDC domain GO:0003676|GO:0005622 BV404_RS13700 c405a886068b5bf6505748bb16ddcc55 611 Pfam PF00271 Helicase conserved C-terminal domain 229 334 9.3E-20 T 09-03-2017 IPR001650 Helicase, C-terminal BV404_RS13700 c405a886068b5bf6505748bb16ddcc55 611 SMART SM00956 414 517 1.9E-50 T 09-03-2017 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 BV404_RS13700 c405a886068b5bf6505748bb16ddcc55 611 Pfam PF09382 RQC domain 409 517 6.8E-38 T 09-03-2017 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 BV404_RS13700 c405a886068b5bf6505748bb16ddcc55 611 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 19 466 2.0E-192 T 09-03-2017 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 BV404_RS13700 c405a886068b5bf6505748bb16ddcc55 611 SMART SM00490 253 334 9.3E-29 T 09-03-2017 IPR001650 Helicase, C-terminal BV404_RS02065 3a4f1a228537eaa40fcabe2ed5ad66a2 112 PIRSF PIRSF039144 1 112 1.8E-55 T 09-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BV404_RS02065 3a4f1a228537eaa40fcabe2ed5ad66a2 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 09-03-2017 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 BV404_RS02065 3a4f1a228537eaa40fcabe2ed5ad66a2 112 SUPERFAMILY SSF54913 1 112 3.81E-45 T 09-03-2017 IPR011322 Nitrogen regulatory PII-like, alpha/beta BV404_RS02065 3a4f1a228537eaa40fcabe2ed5ad66a2 112 SMART SM00938 4 105 6.4E-68 T 09-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BV404_RS02065 3a4f1a228537eaa40fcabe2ed5ad66a2 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 09-03-2017 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 BV404_RS02065 3a4f1a228537eaa40fcabe2ed5ad66a2 112 Gene3D G3DSA:3.30.70.120 1 112 1.3E-50 T 09-03-2017 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BV404_RS02065 3a4f1a228537eaa40fcabe2ed5ad66a2 112 PRINTS PR00340 P-II protein signature 52 75 1.7E-40 T 09-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BV404_RS02065 3a4f1a228537eaa40fcabe2ed5ad66a2 112 PRINTS PR00340 P-II protein signature 23 41 1.7E-40 T 09-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BV404_RS02065 3a4f1a228537eaa40fcabe2ed5ad66a2 112 PRINTS PR00340 P-II protein signature 2 17 1.7E-40 T 09-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BV404_RS02065 3a4f1a228537eaa40fcabe2ed5ad66a2 112 PRINTS PR00340 P-II protein signature 83 103 1.7E-40 T 09-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BV404_RS02065 3a4f1a228537eaa40fcabe2ed5ad66a2 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 2.9E-43 T 09-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BV404_RS02060 f24a0f86b2365fbe8f7d74e5cb73bbca 123 PIRSF PIRSF006287 1 123 2.4E-46 T 09-03-2017 IPR008249 Uncharacterised protein family UPF0231 BV404_RS02060 f24a0f86b2365fbe8f7d74e5cb73bbca 123 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 120 6.0E-33 T 09-03-2017 IPR008249 Uncharacterised protein family UPF0231 BV404_RS02060 f24a0f86b2365fbe8f7d74e5cb73bbca 123 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 122 29.246 T 09-03-2017 IPR008249 Uncharacterised protein family UPF0231 BV404_RS02060 f24a0f86b2365fbe8f7d74e5cb73bbca 123 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 120 1.3E-40 T 09-03-2017 IPR008249 Uncharacterised protein family UPF0231 BV404_RS04445 ed5c7e4b8fa08f90df2346ac416b51f2 288 SUPERFAMILY SSF52096 22 284 7.4E-79 T 09-03-2017 IPR029045 ClpP/crotonase-like domain BV404_RS04445 ed5c7e4b8fa08f90df2346ac416b51f2 288 Gene3D G3DSA:1.10.12.10 226 276 3.0E-31 T 09-03-2017 IPR014748 Crontonase, C-terminal BV404_RS04445 ed5c7e4b8fa08f90df2346ac416b51f2 288 Gene3D G3DSA:3.90.226.10 25 225 4.1E-70 T 09-03-2017 IPR029045 ClpP/crotonase-like domain BV404_RS04445 ed5c7e4b8fa08f90df2346ac416b51f2 288 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 18 287 56.521 T 09-03-2017 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 BV404_RS04445 ed5c7e4b8fa08f90df2346ac416b51f2 288 TIGRFAM TIGR01929 menB: naphthoate synthase 25 284 2.5E-145 T 09-03-2017 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 BV404_RS04445 ed5c7e4b8fa08f90df2346ac416b51f2 288 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 126 146 - T 09-03-2017 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 BV404_RS04445 ed5c7e4b8fa08f90df2346ac416b51f2 288 Pfam PF00378 Enoyl-CoA hydratase/isomerase 34 282 8.0E-77 T 09-03-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 BV404_RS00340 e1ffc208b035da47ce3fbf033fe30475 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 6.0E-22 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BV404_RS00340 e1ffc208b035da47ce3fbf033fe30475 240 SMART SM00448 5 116 4.1E-44 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS00340 e1ffc208b035da47ce3fbf033fe30475 240 SUPERFAMILY SSF52172 3 126 6.83E-42 T 09-03-2017 IPR011006 CheY-like superfamily BV404_RS00340 e1ffc208b035da47ce3fbf033fe30475 240 SMART SM00862 156 232 3.4E-21 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BV404_RS00340 e1ffc208b035da47ce3fbf033fe30475 240 SUPERFAMILY SSF46894 132 234 9.07E-27 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BV404_RS00340 e1ffc208b035da47ce3fbf033fe30475 240 Gene3D G3DSA:3.40.50.2300 4 124 2.4E-41 T 09-03-2017 BV404_RS00340 e1ffc208b035da47ce3fbf033fe30475 240 Gene3D G3DSA:1.10.10.10 133 235 1.2E-31 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS00340 e1ffc208b035da47ce3fbf033fe30475 240 Pfam PF00072 Response regulator receiver domain 7 117 2.1E-29 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS12540 b027a2aa99bc7b2b560e38d1540c1e06 489 Pfam PF10150 Ribonuclease E/G family 124 393 2.0E-103 T 09-03-2017 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 BV404_RS12540 b027a2aa99bc7b2b560e38d1540c1e06 489 SUPERFAMILY SSF50249 39 128 1.53E-19 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS12540 b027a2aa99bc7b2b560e38d1540c1e06 489 Gene3D G3DSA:2.40.50.140 30 128 4.9E-34 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS12540 b027a2aa99bc7b2b560e38d1540c1e06 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 8.9E-173 T 09-03-2017 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 BV404_RS12540 b027a2aa99bc7b2b560e38d1540c1e06 489 SMART SM00316 37 122 6.5E-10 T 09-03-2017 IPR022967 RNA-binding domain, S1 BV404_RS12540 b027a2aa99bc7b2b560e38d1540c1e06 489 Pfam PF00575 S1 RNA binding domain 38 109 5.6E-6 T 09-03-2017 IPR003029 S1 domain GO:0003676 BV404_RS03560 1332f425fa255d42f33ea7e33fc9abf1 488 Pfam PF02954 Bacterial regulatory protein, Fis family 444 484 4.3E-14 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BV404_RS03560 1332f425fa255d42f33ea7e33fc9abf1 488 Gene3D G3DSA:1.10.10.60 426 486 2.4E-15 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS03560 1332f425fa255d42f33ea7e33fc9abf1 488 Gene3D G3DSA:3.40.50.300 134 309 1.4E-61 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS03560 1332f425fa255d42f33ea7e33fc9abf1 488 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 349 358 - T 09-03-2017 IPR025944 Sigma-54 interaction domain, conserved site BV404_RS03560 1332f425fa255d42f33ea7e33fc9abf1 488 Pfam PF06490 Flagellar regulatory protein FleQ 6 115 1.4E-29 T 09-03-2017 IPR010518 Flagellar regulatory FleQ BV404_RS03560 1332f425fa255d42f33ea7e33fc9abf1 488 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 09-03-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BV404_RS03560 1332f425fa255d42f33ea7e33fc9abf1 488 SMART SM00382 157 301 8.4E-12 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS03560 1332f425fa255d42f33ea7e33fc9abf1 488 SUPERFAMILY SSF52540 137 378 1.17E-72 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS03560 1332f425fa255d42f33ea7e33fc9abf1 488 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 450 467 1.8E-10 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BV404_RS03560 1332f425fa255d42f33ea7e33fc9abf1 488 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 467 487 1.8E-10 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BV404_RS03560 1332f425fa255d42f33ea7e33fc9abf1 488 Gene3D G3DSA:1.10.8.60 310 384 2.9E-21 T 09-03-2017 BV404_RS03560 1332f425fa255d42f33ea7e33fc9abf1 488 SUPERFAMILY SSF46689 349 392 4.21E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS03560 1332f425fa255d42f33ea7e33fc9abf1 488 SUPERFAMILY SSF46689 434 486 4.21E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS03560 1332f425fa255d42f33ea7e33fc9abf1 488 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 09-03-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BV404_RS03560 1332f425fa255d42f33ea7e33fc9abf1 488 Pfam PF00158 Sigma-54 interaction domain 137 304 1.4E-73 T 09-03-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BV404_RS03560 1332f425fa255d42f33ea7e33fc9abf1 488 SUPERFAMILY SSF52172 6 182 1.37E-5 T 09-03-2017 IPR011006 CheY-like superfamily BV404_RS08525 bc2e34c2af8a587cc9a84479201c3a8b 762 SUPERFAMILY SSF51726 396 758 3.79E-113 T 09-03-2017 BV404_RS08525 bc2e34c2af8a587cc9a84479201c3a8b 762 Gene3D G3DSA:3.20.20.210 4 387 5.4E-148 T 09-03-2017 BV404_RS08525 bc2e34c2af8a587cc9a84479201c3a8b 762 Gene3D G3DSA:3.20.20.210 392 759 3.8E-129 T 09-03-2017 BV404_RS08525 bc2e34c2af8a587cc9a84479201c3a8b 762 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 431 753 1.9E-149 T 09-03-2017 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 BV404_RS08525 bc2e34c2af8a587cc9a84479201c3a8b 762 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 758 35.979 T 09-03-2017 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 BV404_RS08525 bc2e34c2af8a587cc9a84479201c3a8b 762 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 315 2.2E-120 T 09-03-2017 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 BV404_RS08525 bc2e34c2af8a587cc9a84479201c3a8b 762 PIRSF PIRSF000382 2 762 0.0 T 09-03-2017 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 BV404_RS08525 bc2e34c2af8a587cc9a84479201c3a8b 762 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 757 0.0 T 09-03-2017 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 BV404_RS08525 bc2e34c2af8a587cc9a84479201c3a8b 762 SUPERFAMILY SSF51726 5 393 9.94E-110 T 09-03-2017 BV404_RS03995 43486df37a6d06d669c8c57a38a56baf 250 Pfam PF04333 MlaA lipoprotein 34 225 3.2E-65 T 09-03-2017 IPR007428 MlaA lipoprotein GO:0016020 BV404_RS03995 43486df37a6d06d669c8c57a38a56baf 250 PRINTS PR01805 VacJ lipoprotein signature 141 158 5.9E-30 T 09-03-2017 IPR007428 MlaA lipoprotein GO:0016020 BV404_RS03995 43486df37a6d06d669c8c57a38a56baf 250 PRINTS PR01805 VacJ lipoprotein signature 53 69 5.9E-30 T 09-03-2017 IPR007428 MlaA lipoprotein GO:0016020 BV404_RS03995 43486df37a6d06d669c8c57a38a56baf 250 PRINTS PR01805 VacJ lipoprotein signature 104 121 5.9E-30 T 09-03-2017 IPR007428 MlaA lipoprotein GO:0016020 BV404_RS03995 43486df37a6d06d669c8c57a38a56baf 250 PRINTS PR01805 VacJ lipoprotein signature 35 48 5.9E-30 T 09-03-2017 IPR007428 MlaA lipoprotein GO:0016020 BV404_RS01525 c4846b0a0c56ee6229df9e23f9ae3fe2 725 Gene3D G3DSA:3.40.50.300 289 329 1.5E-14 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS01525 c4846b0a0c56ee6229df9e23f9ae3fe2 725 Gene3D G3DSA:3.40.50.300 366 441 1.5E-14 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS01525 c4846b0a0c56ee6229df9e23f9ae3fe2 725 Pfam PF00270 DEAD/DEAH box helicase 106 218 7.0E-11 T 09-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BV404_RS01525 c4846b0a0c56ee6229df9e23f9ae3fe2 725 Gene3D G3DSA:3.40.50.300 101 219 8.0E-19 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS01525 c4846b0a0c56ee6229df9e23f9ae3fe2 725 Pfam PF00271 Helicase conserved C-terminal domain 292 439 3.3E-8 T 09-03-2017 IPR001650 Helicase, C-terminal BV404_RS01525 c4846b0a0c56ee6229df9e23f9ae3fe2 725 SMART SM00490 343 439 6.2E-10 T 09-03-2017 IPR001650 Helicase, C-terminal BV404_RS01525 c4846b0a0c56ee6229df9e23f9ae3fe2 725 SMART SM00487 99 281 9.4E-8 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain BV404_RS01525 c4846b0a0c56ee6229df9e23f9ae3fe2 725 SUPERFAMILY SSF52540 363 449 3.66E-25 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS01525 c4846b0a0c56ee6229df9e23f9ae3fe2 725 SUPERFAMILY SSF52540 110 243 3.66E-25 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS01525 c4846b0a0c56ee6229df9e23f9ae3fe2 725 SUPERFAMILY SSF52540 270 325 3.66E-25 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS14545 8ac86642bef594e74abd8413ba3cc9f0 260 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 25 259 38.385 T 09-03-2017 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 BV404_RS14545 8ac86642bef594e74abd8413ba3cc9f0 260 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 167 181 - T 09-03-2017 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 BV404_RS14545 8ac86642bef594e74abd8413ba3cc9f0 260 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 45 60 - T 09-03-2017 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 BV404_RS14545 8ac86642bef594e74abd8413ba3cc9f0 260 Pfam PF01209 ubiE/COQ5 methyltransferase family 29 259 1.1E-102 T 09-03-2017 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 BV404_RS14545 8ac86642bef594e74abd8413ba3cc9f0 260 Gene3D G3DSA:3.40.50.150 33 256 5.8E-61 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS14545 8ac86642bef594e74abd8413ba3cc9f0 260 SUPERFAMILY SSF53335 29 258 1.02E-51 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS14545 8ac86642bef594e74abd8413ba3cc9f0 260 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 34 259 8.1E-84 T 09-03-2017 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 BV404_RS10735 656e8d56dccfb77374d7ca28a9a356ab 382 SUPERFAMILY SSF49493 117 158 2.49E-19 T 09-03-2017 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 BV404_RS10735 656e8d56dccfb77374d7ca28a9a356ab 382 SUPERFAMILY SSF49493 217 259 2.49E-19 T 09-03-2017 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 BV404_RS10735 656e8d56dccfb77374d7ca28a9a356ab 382 Pfam PF00684 DnaJ central domain 150 210 3.8E-15 T 09-03-2017 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 BV404_RS10735 656e8d56dccfb77374d7ca28a9a356ab 382 Gene3D G3DSA:1.10.287.110 1 105 7.7E-37 T 09-03-2017 IPR001623 DnaJ domain BV404_RS10735 656e8d56dccfb77374d7ca28a9a356ab 382 SMART SM00271 4 62 1.2E-31 T 09-03-2017 IPR001623 DnaJ domain BV404_RS10735 656e8d56dccfb77374d7ca28a9a356ab 382 SUPERFAMILY SSF57938 137 213 1.44E-22 T 09-03-2017 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 BV404_RS10735 656e8d56dccfb77374d7ca28a9a356ab 382 Pfam PF01556 DnaJ C terminal domain 124 336 7.8E-46 T 09-03-2017 IPR002939 Chaperone DnaJ, C-terminal BV404_RS10735 656e8d56dccfb77374d7ca28a9a356ab 382 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 376 42.978 T 09-03-2017 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 BV404_RS10735 656e8d56dccfb77374d7ca28a9a356ab 382 SUPERFAMILY SSF49493 262 347 8.37E-23 T 09-03-2017 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 BV404_RS10735 656e8d56dccfb77374d7ca28a9a356ab 382 Pfam PF00226 DnaJ domain 5 67 3.9E-27 T 09-03-2017 IPR001623 DnaJ domain BV404_RS10735 656e8d56dccfb77374d7ca28a9a356ab 382 SUPERFAMILY SSF46565 1 110 6.8E-36 T 09-03-2017 IPR001623 DnaJ domain BV404_RS10735 656e8d56dccfb77374d7ca28a9a356ab 382 Gene3D G3DSA:2.10.230.10 144 213 9.2E-25 T 09-03-2017 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 BV404_RS10735 656e8d56dccfb77374d7ca28a9a356ab 382 PRINTS PR00625 DnaJ domain signature 42 62 1.8E-32 T 09-03-2017 IPR001623 DnaJ domain BV404_RS10735 656e8d56dccfb77374d7ca28a9a356ab 382 PRINTS PR00625 DnaJ domain signature 62 81 1.8E-32 T 09-03-2017 IPR001623 DnaJ domain BV404_RS10735 656e8d56dccfb77374d7ca28a9a356ab 382 PRINTS PR00625 DnaJ domain signature 25 40 1.8E-32 T 09-03-2017 IPR001623 DnaJ domain BV404_RS10735 656e8d56dccfb77374d7ca28a9a356ab 382 PRINTS PR00625 DnaJ domain signature 7 25 1.8E-32 T 09-03-2017 IPR001623 DnaJ domain BV404_RS10735 656e8d56dccfb77374d7ca28a9a356ab 382 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 09-03-2017 IPR018253 DnaJ domain, conserved site BV404_RS10735 656e8d56dccfb77374d7ca28a9a356ab 382 Gene3D G3DSA:2.60.260.20 259 336 2.8E-23 T 09-03-2017 BV404_RS10735 656e8d56dccfb77374d7ca28a9a356ab 382 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 352 6.6E-141 T 09-03-2017 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 BV404_RS10735 656e8d56dccfb77374d7ca28a9a356ab 382 Gene3D G3DSA:2.60.260.20 110 143 1.4E-21 T 09-03-2017 BV404_RS10735 656e8d56dccfb77374d7ca28a9a356ab 382 Gene3D G3DSA:2.60.260.20 214 257 1.4E-21 T 09-03-2017 BV404_RS19945 836423d932965a6cde17e9d8e226b24a 78 Pfam PF08543 Phosphomethylpyrimidine kinase 2 77 1.8E-17 T 09-03-2017 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-964975 BV404_RS19945 836423d932965a6cde17e9d8e226b24a 78 SUPERFAMILY SSF53613 2 76 1.71E-17 T 09-03-2017 IPR029056 Ribokinase-like BV404_RS19945 836423d932965a6cde17e9d8e226b24a 78 Gene3D G3DSA:3.40.1190.20 2 76 4.4E-18 T 09-03-2017 IPR029056 Ribokinase-like BV404_RS01685 32939313f7af1583f64f92aa709aad3f 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 3.7E-19 T 09-03-2017 BV404_RS01685 32939313f7af1583f64f92aa709aad3f 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 3.7E-19 T 09-03-2017 BV404_RS01685 32939313f7af1583f64f92aa709aad3f 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 3.7E-19 T 09-03-2017 BV404_RS01685 32939313f7af1583f64f92aa709aad3f 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 3.7E-19 T 09-03-2017 BV404_RS01685 32939313f7af1583f64f92aa709aad3f 409 SUPERFAMILY SSF51905 268 385 2.2E-58 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS01685 32939313f7af1583f64f92aa709aad3f 409 SUPERFAMILY SSF51905 5 177 2.2E-58 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS01685 32939313f7af1583f64f92aa709aad3f 409 Gene3D G3DSA:3.30.9.10 169 274 9.1E-5 T 09-03-2017 BV404_RS01685 32939313f7af1583f64f92aa709aad3f 409 Gene3D G3DSA:3.30.9.10 332 360 9.1E-5 T 09-03-2017 BV404_RS01685 32939313f7af1583f64f92aa709aad3f 409 Pfam PF01494 FAD binding domain 5 348 7.9E-29 T 09-03-2017 IPR002938 FAD-binding domain GO:0071949 BV404_RS01685 32939313f7af1583f64f92aa709aad3f 409 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 09-03-2017 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 BV404_RS01685 32939313f7af1583f64f92aa709aad3f 409 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 391 3.1E-137 T 09-03-2017 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 BV404_RS01685 32939313f7af1583f64f92aa709aad3f 409 Gene3D G3DSA:3.50.50.60 1 168 8.9E-46 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS01685 32939313f7af1583f64f92aa709aad3f 409 Gene3D G3DSA:3.50.50.60 279 316 8.9E-46 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS05125 f5d179930c74e5ae8d5d1e0ffc50de1c 434 PIRSF PIRSF000337 2 434 6.2E-130 T 09-03-2017 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 BV404_RS05125 f5d179930c74e5ae8d5d1e0ffc50de1c 434 Pfam PF00296 Luciferase-like monooxygenase 27 387 5.9E-51 T 09-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 BV404_RS05125 f5d179930c74e5ae8d5d1e0ffc50de1c 434 SUPERFAMILY SSF51679 5 434 7.72E-101 T 09-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 BV404_RS05125 f5d179930c74e5ae8d5d1e0ffc50de1c 434 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 19 431 5.7E-114 T 09-03-2017 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 BV404_RS05125 f5d179930c74e5ae8d5d1e0ffc50de1c 434 Gene3D G3DSA:3.20.20.30 2 305 7.7E-102 T 09-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 BV404_RS05125 f5d179930c74e5ae8d5d1e0ffc50de1c 434 Gene3D G3DSA:3.20.20.30 348 434 7.7E-102 T 09-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 BV404_RS00975 b526259b97e78434039759126b03ff8c 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 19.341 T 09-03-2017 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS00975 b526259b97e78434039759126b03ff8c 63 SUPERFAMILY SSF46561 1 61 1.3E-23 T 09-03-2017 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS00975 b526259b97e78434039759126b03ff8c 63 Pfam PF00831 Ribosomal L29 protein 4 60 1.0E-25 T 09-03-2017 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS00975 b526259b97e78434039759126b03ff8c 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 09-03-2017 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS00975 b526259b97e78434039759126b03ff8c 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 4.2E-24 T 09-03-2017 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS00975 b526259b97e78434039759126b03ff8c 63 Gene3D G3DSA:1.10.287.310 1 60 3.7E-30 T 09-03-2017 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS07850 ccefe76b9d4e58d0e9ae7a3fc01aa0bb 324 Gene3D G3DSA:2.40.50.100 42 76 4.0E-14 T 09-03-2017 BV404_RS07850 ccefe76b9d4e58d0e9ae7a3fc01aa0bb 324 Gene3D G3DSA:2.40.50.100 203 236 4.0E-14 T 09-03-2017 BV404_RS07850 ccefe76b9d4e58d0e9ae7a3fc01aa0bb 324 Pfam PF13533 Biotin-lipoyl like 45 88 1.9E-13 T 09-03-2017 BV404_RS07850 ccefe76b9d4e58d0e9ae7a3fc01aa0bb 324 SUPERFAMILY SSF111369 40 101 2.09E-7 T 09-03-2017 BV404_RS07850 ccefe76b9d4e58d0e9ae7a3fc01aa0bb 324 Pfam PF13437 HlyD family secretion protein 206 313 6.2E-5 T 09-03-2017 BV404_RS13260 786c934a9366d74a7a8b40e043dfd796 1144 Gene3D G3DSA:3.30.450.20 626 741 7.2E-14 T 09-03-2017 BV404_RS13260 786c934a9366d74a7a8b40e043dfd796 1144 SMART SM00388 788 853 8.6E-13 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS13260 786c934a9366d74a7a8b40e043dfd796 1144 SUPERFAMILY SSF47384 773 854 6.08E-15 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS13260 786c934a9366d74a7a8b40e043dfd796 1144 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 898 1004 1.7E-19 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS13260 786c934a9366d74a7a8b40e043dfd796 1144 Pfam PF00512 His Kinase A (phospho-acceptor) domain 788 853 2.3E-11 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS13260 786c934a9366d74a7a8b40e043dfd796 1144 Gene3D G3DSA:3.40.50.2300 1026 1143 8.0E-18 T 09-03-2017 BV404_RS13260 786c934a9366d74a7a8b40e043dfd796 1144 Gene3D G3DSA:1.10.287.130 780 849 7.6E-12 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS13260 786c934a9366d74a7a8b40e043dfd796 1144 Gene3D G3DSA:3.30.565.10 854 1006 3.0E-38 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS13260 786c934a9366d74a7a8b40e043dfd796 1144 SMART SM00448 1027 1140 1.2E-17 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS13260 786c934a9366d74a7a8b40e043dfd796 1144 Pfam PF00072 Response regulator receiver domain 1029 1140 5.1E-13 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS13260 786c934a9366d74a7a8b40e043dfd796 1144 SUPERFAMILY SSF55874 843 1002 7.86E-38 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS13260 786c934a9366d74a7a8b40e043dfd796 1144 SMART SM00387 897 1006 7.0E-28 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS13260 786c934a9366d74a7a8b40e043dfd796 1144 SUPERFAMILY SSF52172 1027 1143 2.85E-19 T 09-03-2017 IPR011006 CheY-like superfamily BV404_RS13260 786c934a9366d74a7a8b40e043dfd796 1144 Pfam PF12860 PAS fold 634 748 4.1E-44 T 09-03-2017 BV404_RS13260 786c934a9366d74a7a8b40e043dfd796 1144 PRINTS PR00344 Bacterial sensor protein C-terminal signature 933 947 1.3E-9 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS13260 786c934a9366d74a7a8b40e043dfd796 1144 PRINTS PR00344 Bacterial sensor protein C-terminal signature 990 1003 1.3E-9 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS13260 786c934a9366d74a7a8b40e043dfd796 1144 PRINTS PR00344 Bacterial sensor protein C-terminal signature 966 984 1.3E-9 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS13260 786c934a9366d74a7a8b40e043dfd796 1144 PRINTS PR00344 Bacterial sensor protein C-terminal signature 951 961 1.3E-9 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS13260 786c934a9366d74a7a8b40e043dfd796 1144 SUPERFAMILY SSF55785 626 741 5.65E-9 T 09-03-2017 IPR000014 PAS domain BV404_RS13615 db4c75e794643de20614df8101b74bbe 224 SUPERFAMILY SSF47781 17 91 1.87E-10 T 09-03-2017 IPR010994 RuvA domain 2-like BV404_RS13615 db4c75e794643de20614df8101b74bbe 224 Pfam PF04002 RadC-like JAB domain 104 222 1.1E-45 T 09-03-2017 IPR025657 RadC-like JAB domain BV404_RS13615 db4c75e794643de20614df8101b74bbe 224 Gene3D G3DSA:3.40.140.10 101 224 1.4E-51 T 09-03-2017 BV404_RS13615 db4c75e794643de20614df8101b74bbe 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 6.6E-79 T 09-03-2017 IPR001405 RadC protein BV404_RS13615 db4c75e794643de20614df8101b74bbe 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 09-03-2017 IPR020891 Uncharacterised protein family UPF0758, conserved site BV404_RS13615 db4c75e794643de20614df8101b74bbe 224 Gene3D G3DSA:1.10.150.20 50 78 9.5E-4 T 09-03-2017 BV404_RS13615 db4c75e794643de20614df8101b74bbe 224 SUPERFAMILY SSF102712 133 193 3.4E-5 T 09-03-2017 BV404_RS05750 2c36b22ca724473b8ecd8d71b5f7fa93 877 SMART SM00493 3 141 6.8E-29 T 09-03-2017 IPR006171 Toprim domain BV404_RS05750 2c36b22ca724473b8ecd8d71b5f7fa93 877 SUPERFAMILY SSF56712 3 617 4.19E-200 T 09-03-2017 IPR023405 DNA topoisomerase, type IA, core domain BV404_RS05750 2c36b22ca724473b8ecd8d71b5f7fa93 877 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 730 54.744 T 09-03-2017 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 BV404_RS05750 2c36b22ca724473b8ecd8d71b5f7fa93 877 SUPERFAMILY SSF57783 751 814 9.52E-20 T 09-03-2017 BV404_RS05750 2c36b22ca724473b8ecd8d71b5f7fa93 877 Pfam PF01751 Toprim domain 5 151 1.0E-31 T 09-03-2017 IPR006171 Toprim domain BV404_RS05750 2c36b22ca724473b8ecd8d71b5f7fa93 877 SUPERFAMILY SSF57783 707 749 2.21E-5 T 09-03-2017 BV404_RS05750 2c36b22ca724473b8ecd8d71b5f7fa93 877 Gene3D G3DSA:1.10.460.10 173 220 2.5E-59 T 09-03-2017 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 BV404_RS05750 2c36b22ca724473b8ecd8d71b5f7fa93 877 Gene3D G3DSA:1.10.460.10 482 586 2.5E-59 T 09-03-2017 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 BV404_RS05750 2c36b22ca724473b8ecd8d71b5f7fa93 877 SMART SM00437 281 535 1.4E-122 T 09-03-2017 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 BV404_RS05750 2c36b22ca724473b8ecd8d71b5f7fa93 877 SUPERFAMILY SSF57783 593 630 1.63E-7 T 09-03-2017 BV404_RS05750 2c36b22ca724473b8ecd8d71b5f7fa93 877 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 606 630 1.3E-4 T 09-03-2017 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 BV404_RS05750 2c36b22ca724473b8ecd8d71b5f7fa93 877 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 715 752 4.5E-9 T 09-03-2017 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 BV404_RS05750 2c36b22ca724473b8ecd8d71b5f7fa93 877 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 642 4.8E-250 T 09-03-2017 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 BV404_RS05750 2c36b22ca724473b8ecd8d71b5f7fa93 877 Gene3D G3DSA:2.70.20.10 347 481 1.1E-32 T 09-03-2017 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 BV404_RS05750 2c36b22ca724473b8ecd8d71b5f7fa93 877 Gene3D G3DSA:2.70.20.10 222 343 8.0E-35 T 09-03-2017 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 BV404_RS05750 2c36b22ca724473b8ecd8d71b5f7fa93 877 Pfam PF01131 DNA topoisomerase 166 573 3.8E-128 T 09-03-2017 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BV404_RS05750 2c36b22ca724473b8ecd8d71b5f7fa93 877 Gene3D G3DSA:2.20.25.10 815 872 6.2E-29 T 09-03-2017 BV404_RS05750 2c36b22ca724473b8ecd8d71b5f7fa93 877 Pfam PF08272 Topoisomerase I zinc-ribbon-like 831 870 3.5E-19 T 09-03-2017 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 BV404_RS05750 2c36b22ca724473b8ecd8d71b5f7fa93 877 Pfam PF08272 Topoisomerase I zinc-ribbon-like 764 800 1.5E-10 T 09-03-2017 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 BV404_RS05750 2c36b22ca724473b8ecd8d71b5f7fa93 877 SMART SM00436 142 230 6.4E-49 T 09-03-2017 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 BV404_RS05750 2c36b22ca724473b8ecd8d71b5f7fa93 877 Gene3D G3DSA:3.40.50.140 1 172 5.3E-57 T 09-03-2017 IPR006171 Toprim domain BV404_RS05750 2c36b22ca724473b8ecd8d71b5f7fa93 877 Gene3D G3DSA:3.30.65.10 593 631 1.3E-10 T 09-03-2017 BV404_RS05750 2c36b22ca724473b8ecd8d71b5f7fa93 877 Gene3D G3DSA:3.30.65.10 714 751 1.6E-9 T 09-03-2017 BV404_RS05750 2c36b22ca724473b8ecd8d71b5f7fa93 877 Gene3D G3DSA:3.30.65.10 752 813 6.6E-26 T 09-03-2017 BV404_RS05750 2c36b22ca724473b8ecd8d71b5f7fa93 877 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 399 415 7.3E-36 T 09-03-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 BV404_RS05750 2c36b22ca724473b8ecd8d71b5f7fa93 877 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 498 512 7.3E-36 T 09-03-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 BV404_RS05750 2c36b22ca724473b8ecd8d71b5f7fa93 877 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 200 218 7.3E-36 T 09-03-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 BV404_RS05750 2c36b22ca724473b8ecd8d71b5f7fa93 877 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 115 128 7.3E-36 T 09-03-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 BV404_RS05750 2c36b22ca724473b8ecd8d71b5f7fa93 877 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 323 332 7.3E-36 T 09-03-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 BV404_RS05750 2c36b22ca724473b8ecd8d71b5f7fa93 877 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 318 332 - T 09-03-2017 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 BV404_RS05750 2c36b22ca724473b8ecd8d71b5f7fa93 877 SUPERFAMILY SSF57783 816 872 9.52E-22 T 09-03-2017 BV404_RS08770 79567b5538cd9d20455419aed5c4fe6f 179 Pfam PF00691 OmpA family 78 173 4.1E-22 T 09-03-2017 IPR006665 OmpA-like domain BV404_RS08770 79567b5538cd9d20455419aed5c4fe6f 179 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 76 179 4.2E-45 T 09-03-2017 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 BV404_RS08770 79567b5538cd9d20455419aed5c4fe6f 179 SUPERFAMILY SSF103088 70 179 3.4E-34 T 09-03-2017 IPR006665 OmpA-like domain BV404_RS08770 79567b5538cd9d20455419aed5c4fe6f 179 Gene3D G3DSA:3.30.1330.60 67 178 6.3E-35 T 09-03-2017 IPR006665 OmpA-like domain BV404_RS08770 79567b5538cd9d20455419aed5c4fe6f 179 ProSitePatterns PS01068 OmpA-like domain. 111 155 - T 09-03-2017 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 BV404_RS08770 79567b5538cd9d20455419aed5c4fe6f 179 PRINTS PR01021 OMPA domain signature 79 101 2.4E-16 T 09-03-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BV404_RS08770 79567b5538cd9d20455419aed5c4fe6f 179 PRINTS PR01021 OMPA domain signature 109 124 2.4E-16 T 09-03-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BV404_RS08770 79567b5538cd9d20455419aed5c4fe6f 179 PRINTS PR01021 OMPA domain signature 124 140 2.4E-16 T 09-03-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BV404_RS14500 f032ca65e82580606d3a4634f28f5d62 333 Gene3D G3DSA:3.40.50.2300 156 304 1.1E-46 T 09-03-2017 BV404_RS14500 f032ca65e82580606d3a4634f28f5d62 333 Gene3D G3DSA:3.40.50.2300 32 155 1.8E-38 T 09-03-2017 BV404_RS14500 f032ca65e82580606d3a4634f28f5d62 333 PIRSF PIRSF002816 1 333 2.4E-148 T 09-03-2017 IPR026266 L-arabinose-binding periplasmic protein GO:0042882 BV404_RS14500 f032ca65e82580606d3a4634f28f5d62 333 SUPERFAMILY SSF53822 33 331 2.78E-65 T 09-03-2017 IPR028082 Periplasmic binding protein-like I BV404_RS14500 f032ca65e82580606d3a4634f28f5d62 333 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 32 327 2.6E-76 T 09-03-2017 IPR001761 Periplasmic binding protein/LacI sugar binding domain BV404_RS13870 5fc1e8017367075e208720e7d2fecb64 494 SUPERFAMILY SSF48179 348 487 1.38E-41 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 BV404_RS13870 5fc1e8017367075e208720e7d2fecb64 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 355 485 3.7E-16 T 09-03-2017 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 BV404_RS13870 5fc1e8017367075e208720e7d2fecb64 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 341 2.0E-24 T 09-03-2017 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 BV404_RS13870 5fc1e8017367075e208720e7d2fecb64 494 SUPERFAMILY SSF51735 27 209 2.93E-58 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS13870 5fc1e8017367075e208720e7d2fecb64 494 SUPERFAMILY SSF48179 210 341 5.27E-39 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 BV404_RS13870 5fc1e8017367075e208720e7d2fecb64 494 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 367 7.8E-124 T 09-03-2017 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 BV404_RS13870 5fc1e8017367075e208720e7d2fecb64 494 Gene3D G3DSA:1.10.1040.10 362 484 3.3E-14 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BV404_RS13870 5fc1e8017367075e208720e7d2fecb64 494 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 1.1E-59 T 09-03-2017 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 BV404_RS13870 5fc1e8017367075e208720e7d2fecb64 494 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 22 488 36.916 T 09-03-2017 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 BV404_RS13870 5fc1e8017367075e208720e7d2fecb64 494 Gene3D G3DSA:3.40.50.720 1 201 2.9E-74 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS13545 500599c84a9f0c7646abad6e81eea6c3 350 Gene3D G3DSA:3.40.50.2000 168 343 3.7E-57 T 09-03-2017 BV404_RS13545 500599c84a9f0c7646abad6e81eea6c3 350 SUPERFAMILY SSF53756 4 344 6.75E-97 T 09-03-2017 BV404_RS13545 500599c84a9f0c7646abad6e81eea6c3 350 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 4 343 1.8E-147 T 09-03-2017 IPR011910 Lipopolysaccharide heptosyltransferase II GO:0009103|GO:0016757 BV404_RS13545 500599c84a9f0c7646abad6e81eea6c3 350 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 71 326 7.7E-72 T 09-03-2017 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 BV404_RS13545 500599c84a9f0c7646abad6e81eea6c3 350 Gene3D G3DSA:3.40.50.2000 4 142 2.3E-51 T 09-03-2017 BV404_RS12265 58fa80edbeeacafcd44fc84699871510 318 Hamap MF_00162 Glutathione synthetase [gshB]. 1 316 178.412 T 09-03-2017 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 BV404_RS12265 58fa80edbeeacafcd44fc84699871510 318 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 2.5E-80 T 09-03-2017 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 BV404_RS12265 58fa80edbeeacafcd44fc84699871510 318 Gene3D G3DSA:3.30.1490.20 137 191 2.0E-31 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 BV404_RS12265 58fa80edbeeacafcd44fc84699871510 318 SUPERFAMILY SSF56059 123 313 4.64E-60 T 09-03-2017 BV404_RS12265 58fa80edbeeacafcd44fc84699871510 318 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 8.2E-48 T 09-03-2017 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 BV404_RS12265 58fa80edbeeacafcd44fc84699871510 318 Gene3D G3DSA:3.40.50.20 2 129 5.4E-56 T 09-03-2017 IPR016185 Pre-ATP-grasp domain BV404_RS12265 58fa80edbeeacafcd44fc84699871510 318 Gene3D G3DSA:3.30.470.20 192 299 2.4E-50 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 BV404_RS12265 58fa80edbeeacafcd44fc84699871510 318 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 311 4.0E-139 T 09-03-2017 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 BV404_RS12265 58fa80edbeeacafcd44fc84699871510 318 SUPERFAMILY SSF52440 2 122 1.73E-46 T 09-03-2017 IPR016185 Pre-ATP-grasp domain BV404_RS12535 e3a7be338062450b964e3e0786c138b3 1296 Pfam PF13502 AsmA-like C-terminal region 1034 1274 6.1E-57 T 09-03-2017 IPR032712 AsmA-like, C-terminal BV404_RS12535 e3a7be338062450b964e3e0786c138b3 1296 Pfam PF13116 Protein of unknown function 508 794 2.4E-95 T 09-03-2017 IPR025263 Domain of unknown function DUF3971 BV404_RS12535 e3a7be338062450b964e3e0786c138b3 1296 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 7 1284 0.0 T 09-03-2017 IPR011836 Conserved hypothetical protein CHP02099 BV404_RS13950 57e69b8595026808697df1f619f04b36 377 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 2 350 1.2E-105 T 09-03-2017 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 BV404_RS13950 57e69b8595026808697df1f619f04b36 377 SUPERFAMILY SSF52440 1 88 4.03E-16 T 09-03-2017 IPR016185 Pre-ATP-grasp domain BV404_RS13950 57e69b8595026808697df1f619f04b36 377 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 2 346 37.553 T 09-03-2017 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 BV404_RS13950 57e69b8595026808697df1f619f04b36 377 Gene3D G3DSA:3.30.470.20 177 360 6.2E-63 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 BV404_RS13950 57e69b8595026808697df1f619f04b36 377 Gene3D G3DSA:3.40.50.20 1 82 4.8E-22 T 09-03-2017 IPR016185 Pre-ATP-grasp domain BV404_RS13950 57e69b8595026808697df1f619f04b36 377 Gene3D G3DSA:3.30.1490.20 107 165 1.0E-21 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 BV404_RS13950 57e69b8595026808697df1f619f04b36 377 SUPERFAMILY SSF51246 299 369 3.92E-19 T 09-03-2017 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BV404_RS13950 57e69b8595026808697df1f619f04b36 377 Pfam PF02222 ATP-grasp domain 101 274 1.3E-50 T 09-03-2017 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type BV404_RS13950 57e69b8595026808697df1f619f04b36 377 SUPERFAMILY SSF56059 92 295 4.24E-56 T 09-03-2017 BV404_RS05115 16253a4cfb96072e98d5954ec427d49e 1518 SUPERFAMILY SSF56801 884 1413 1.7E-125 T 09-03-2017 BV404_RS05115 16253a4cfb96072e98d5954ec427d49e 1518 Pfam PF08415 Nonribosomal peptide synthase 316 371 3.4E-13 T 09-03-2017 IPR013624 Non-ribosomal peptide synthetase BV404_RS05115 16253a4cfb96072e98d5954ec427d49e 1518 Pfam PF08415 Nonribosomal peptide synthase 780 833 6.3E-6 T 09-03-2017 IPR013624 Non-ribosomal peptide synthetase BV404_RS05115 16253a4cfb96072e98d5954ec427d49e 1518 Gene3D G3DSA:3.40.50.980 923 1064 3.2E-36 T 09-03-2017 BV404_RS05115 16253a4cfb96072e98d5954ec427d49e 1518 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 937 1341 6.1E-109 T 09-03-2017 IPR010071 Amino acid adenylation domain BV404_RS05115 16253a4cfb96072e98d5954ec427d49e 1518 Gene3D G3DSA:3.40.50.980 1065 1228 1.3E-37 T 09-03-2017 BV404_RS05115 16253a4cfb96072e98d5954ec427d49e 1518 Gene3D G3DSA:3.30.300.30 1314 1413 7.4E-20 T 09-03-2017 BV404_RS05115 16253a4cfb96072e98d5954ec427d49e 1518 SUPERFAMILY SSF52777 652 869 3.67E-24 T 09-03-2017 BV404_RS05115 16253a4cfb96072e98d5954ec427d49e 1518 SUPERFAMILY SSF52777 655 661 2.82E-12 T 09-03-2017 BV404_RS05115 16253a4cfb96072e98d5954ec427d49e 1518 SUPERFAMILY SSF52777 447 625 2.82E-12 T 09-03-2017 BV404_RS05115 16253a4cfb96072e98d5954ec427d49e 1518 Pfam PF00668 Condensation domain 4 291 6.5E-37 T 09-03-2017 IPR001242 Condensation domain BV404_RS05115 16253a4cfb96072e98d5954ec427d49e 1518 Pfam PF00668 Condensation domain 449 737 2.4E-19 T 09-03-2017 IPR001242 Condensation domain BV404_RS05115 16253a4cfb96072e98d5954ec427d49e 1518 SUPERFAMILY SSF52777 4 174 2.89E-19 T 09-03-2017 BV404_RS05115 16253a4cfb96072e98d5954ec427d49e 1518 Pfam PF00501 AMP-binding enzyme 924 1317 1.2E-82 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 BV404_RS05115 16253a4cfb96072e98d5954ec427d49e 1518 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1060 1071 - T 09-03-2017 IPR020845 AMP-binding, conserved site BV404_RS05115 16253a4cfb96072e98d5954ec427d49e 1518 SUPERFAMILY SSF52777 182 426 4.0E-32 T 09-03-2017 BV404_RS05115 16253a4cfb96072e98d5954ec427d49e 1518 Gene3D G3DSA:2.30.38.10 1229 1306 5.8E-16 T 09-03-2017 BV404_RS05765 cbfee059c437738f139ec7a69813f375 484 Gene3D G3DSA:3.40.50.2000 254 463 4.4E-65 T 09-03-2017 BV404_RS05765 cbfee059c437738f139ec7a69813f375 484 Hamap MF_00484 Glycogen synthase [glgA]. 4 481 41.221 T 09-03-2017 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 BV404_RS05765 cbfee059c437738f139ec7a69813f375 484 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 5 479 1.5E-159 T 09-03-2017 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 BV404_RS05765 cbfee059c437738f139ec7a69813f375 484 Pfam PF08323 Starch synthase catalytic domain 5 236 5.8E-70 T 09-03-2017 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 BV404_RS05765 cbfee059c437738f139ec7a69813f375 484 SUPERFAMILY SSF53756 5 480 2.55E-116 T 09-03-2017 BV404_RS05765 cbfee059c437738f139ec7a69813f375 484 Pfam PF00534 Glycosyl transferases group 1 300 443 1.7E-14 T 09-03-2017 IPR001296 Glycosyl transferase, family 1 BV404_RS00120 17a1e43a6b3b4987a4f948f7a17b5bdf 334 Pfam PF00962 Adenosine/AMP deaminase 5 326 1.5E-87 T 09-03-2017 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 BV404_RS00120 17a1e43a6b3b4987a4f948f7a17b5bdf 334 Gene3D G3DSA:3.20.20.140 2 333 6.9E-96 T 09-03-2017 BV404_RS00120 17a1e43a6b3b4987a4f948f7a17b5bdf 334 SUPERFAMILY SSF51556 4 331 7.94E-74 T 09-03-2017 IPR032466 Metal-dependent hydrolase BV404_RS00120 17a1e43a6b3b4987a4f948f7a17b5bdf 334 Hamap MF_00540 Adenosine deaminase [add]. 1 331 53.69 T 09-03-2017 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 BV404_RS00120 17a1e43a6b3b4987a4f948f7a17b5bdf 334 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 7 330 8.9E-120 T 09-03-2017 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 BV404_RS05285 f6d6213eecc8acaa9199a91c4e07d4f1 307 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 27 51 - T 09-03-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 BV404_RS05285 f6d6213eecc8acaa9199a91c4e07d4f1 307 SUPERFAMILY SSF53613 1 305 6.08E-84 T 09-03-2017 IPR029056 Ribokinase-like BV404_RS05285 f6d6213eecc8acaa9199a91c4e07d4f1 307 Pfam PF00294 pfkB family carbohydrate kinase 1 297 9.9E-72 T 09-03-2017 IPR011611 Carbohydrate kinase PfkB BV404_RS05285 f6d6213eecc8acaa9199a91c4e07d4f1 307 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 243 256 - T 09-03-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 BV404_RS05285 f6d6213eecc8acaa9199a91c4e07d4f1 307 Gene3D G3DSA:3.40.1190.20 1 306 6.9E-87 T 09-03-2017 IPR029056 Ribokinase-like BV404_RS05285 f6d6213eecc8acaa9199a91c4e07d4f1 307 PRINTS PR00990 Ribokinase signature 175 190 4.8E-8 T 09-03-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 BV404_RS05285 f6d6213eecc8acaa9199a91c4e07d4f1 307 PRINTS PR00990 Ribokinase signature 214 225 4.8E-8 T 09-03-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 BV404_RS05285 f6d6213eecc8acaa9199a91c4e07d4f1 307 PRINTS PR00990 Ribokinase signature 22 41 4.8E-8 T 09-03-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 BV404_RS14020 ce4260dc9e3efd09c49a355105a5a964 474 Gene3D G3DSA:2.60.40.10 357 472 7.8E-36 T 09-03-2017 IPR013783 Immunoglobulin-like fold BV404_RS14020 ce4260dc9e3efd09c49a355105a5a964 474 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 359 471 1.3E-28 T 09-03-2017 IPR032879 FixG, C-terminal immunoglobulin-like domain BV404_RS14020 ce4260dc9e3efd09c49a355105a5a964 474 Pfam PF12801 4Fe-4S binding domain 98 137 9.6E-9 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BV404_RS14020 ce4260dc9e3efd09c49a355105a5a964 474 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 44 472 1.6E-173 T 09-03-2017 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021 BV404_RS14020 ce4260dc9e3efd09c49a355105a5a964 474 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 275 286 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BV404_RS14020 ce4260dc9e3efd09c49a355105a5a964 474 Gene3D G3DSA:1.10.1060.10 226 283 1.1E-7 T 09-03-2017 BV404_RS14020 ce4260dc9e3efd09c49a355105a5a964 474 Gene3D G3DSA:3.30.70.20 284 319 2.2E-6 T 09-03-2017 BV404_RS14020 ce4260dc9e3efd09c49a355105a5a964 474 Pfam PF13746 4Fe-4S dicluster domain 223 327 4.8E-41 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BV404_RS14020 ce4260dc9e3efd09c49a355105a5a964 474 SUPERFAMILY SSF54862 176 350 6.58E-32 T 09-03-2017 BV404_RS14020 ce4260dc9e3efd09c49a355105a5a964 474 SUPERFAMILY SSF54862 108 130 6.58E-32 T 09-03-2017 BV404_RS08385 0af033cc04f0e3c7ab0f2250bf8ed162 255 Pfam PF09339 IclR helix-turn-helix domain 20 57 3.8E-6 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 BV404_RS08385 0af033cc04f0e3c7ab0f2250bf8ed162 255 Pfam PF01614 Bacterial transcriptional regulator 123 242 2.5E-23 T 09-03-2017 IPR014757 Transcription regulator IclR, C-terminal BV404_RS08385 0af033cc04f0e3c7ab0f2250bf8ed162 255 SUPERFAMILY SSF55781 78 244 7.36E-41 T 09-03-2017 IPR029016 GAF domain-like BV404_RS08385 0af033cc04f0e3c7ab0f2250bf8ed162 255 Gene3D G3DSA:3.30.450.40 82 244 2.7E-45 T 09-03-2017 IPR029016 GAF domain-like BV404_RS08385 0af033cc04f0e3c7ab0f2250bf8ed162 255 SUPERFAMILY SSF46785 7 74 6.99E-6 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS08385 0af033cc04f0e3c7ab0f2250bf8ed162 255 Gene3D G3DSA:1.10.10.10 6 65 1.7E-9 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS08900 1ae76daf0c0bfeed1c36dae00386acbe 246 SUPERFAMILY SSF161098 11 78 4.71E-38 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS08900 1ae76daf0c0bfeed1c36dae00386acbe 246 SUPERFAMILY SSF161098 110 233 4.71E-38 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS08900 1ae76daf0c0bfeed1c36dae00386acbe 246 Gene3D G3DSA:1.10.3720.10 110 241 2.0E-38 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS08900 1ae76daf0c0bfeed1c36dae00386acbe 246 Gene3D G3DSA:1.10.3720.10 8 78 2.0E-38 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS08900 1ae76daf0c0bfeed1c36dae00386acbe 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 241 1.9E-21 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS08900 1ae76daf0c0bfeed1c36dae00386acbe 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 73 2.0E-15 T 09-03-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 BV404_RS13605 872bce6b4df72eebfcb19fc4e5a2b8f9 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 09-03-2017 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS13605 872bce6b4df72eebfcb19fc4e5a2b8f9 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 14.671 T 09-03-2017 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS13605 872bce6b4df72eebfcb19fc4e5a2b8f9 55 SUPERFAMILY SSF57829 1 53 6.1E-19 T 09-03-2017 IPR011332 Zinc-binding ribosomal protein GO:0006412 BV404_RS13605 872bce6b4df72eebfcb19fc4e5a2b8f9 55 Pfam PF00471 Ribosomal protein L33 7 53 1.1E-16 T 09-03-2017 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS13605 872bce6b4df72eebfcb19fc4e5a2b8f9 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 3.2E-25 T 09-03-2017 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS03500 afe8dcdb735116c718c8396c13edb060 387 SUPERFAMILY SSF55060 205 382 5.44E-51 T 09-03-2017 IPR013750 GHMP kinase, C-terminal domain BV404_RS03500 afe8dcdb735116c718c8396c13edb060 387 Pfam PF08544 GHMP kinases C terminal 280 361 3.2E-9 T 09-03-2017 IPR013750 GHMP kinase, C-terminal domain BV404_RS03500 afe8dcdb735116c718c8396c13edb060 387 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 122 133 - T 09-03-2017 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 BV404_RS03500 afe8dcdb735116c718c8396c13edb060 387 PRINTS PR00473 Galactokinase signature 93 104 1.1E-29 T 09-03-2017 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BV404_RS03500 afe8dcdb735116c718c8396c13edb060 387 PRINTS PR00473 Galactokinase signature 113 131 1.1E-29 T 09-03-2017 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BV404_RS03500 afe8dcdb735116c718c8396c13edb060 387 PRINTS PR00473 Galactokinase signature 264 278 1.1E-29 T 09-03-2017 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BV404_RS03500 afe8dcdb735116c718c8396c13edb060 387 PRINTS PR00473 Galactokinase signature 28 46 1.1E-29 T 09-03-2017 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BV404_RS03500 afe8dcdb735116c718c8396c13edb060 387 Pfam PF10509 Galactokinase galactose-binding signature 12 59 4.3E-21 T 09-03-2017 IPR019539 Galactokinase galactose-binding domain KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BV404_RS03500 afe8dcdb735116c718c8396c13edb060 387 PRINTS PR00959 Mevalonate kinase family signature 26 50 3.1E-44 T 09-03-2017 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BV404_RS03500 afe8dcdb735116c718c8396c13edb060 387 PRINTS PR00959 Mevalonate kinase family signature 329 346 3.1E-44 T 09-03-2017 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BV404_RS03500 afe8dcdb735116c718c8396c13edb060 387 PRINTS PR00959 Mevalonate kinase family signature 163 182 3.1E-44 T 09-03-2017 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BV404_RS03500 afe8dcdb735116c718c8396c13edb060 387 PRINTS PR00959 Mevalonate kinase family signature 120 142 3.1E-44 T 09-03-2017 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BV404_RS03500 afe8dcdb735116c718c8396c13edb060 387 Hamap MF_00246 Galactokinase [galK]. 26 382 44.215 T 09-03-2017 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BV404_RS03500 afe8dcdb735116c718c8396c13edb060 387 TIGRFAM TIGR00131 gal_kin: galactokinase 6 381 2.0E-148 T 09-03-2017 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BV404_RS03500 afe8dcdb735116c718c8396c13edb060 387 Gene3D G3DSA:3.30.230.10 4 208 1.0E-76 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BV404_RS03500 afe8dcdb735116c718c8396c13edb060 387 SUPERFAMILY SSF54211 2 204 8.35E-63 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold BV404_RS03500 afe8dcdb735116c718c8396c13edb060 387 PIRSF PIRSF000530 1 384 1.1E-125 T 09-03-2017 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BV404_RS03500 afe8dcdb735116c718c8396c13edb060 387 ProSitePatterns PS00106 Galactokinase signature. 28 39 - T 09-03-2017 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BV404_RS03500 afe8dcdb735116c718c8396c13edb060 387 Gene3D G3DSA:3.30.70.890 209 381 1.2E-59 T 09-03-2017 IPR013750 GHMP kinase, C-terminal domain BV404_RS03500 afe8dcdb735116c718c8396c13edb060 387 Pfam PF00288 GHMP kinases N terminal domain 115 181 1.4E-10 T 09-03-2017 IPR006204 GHMP kinase N-terminal domain GO:0005524 BV404_RS14670 eecf513ea90e5fb4c63d57986b8177be 276 SUPERFAMILY SSF54506 138 274 8.32E-51 T 09-03-2017 BV404_RS14670 eecf513ea90e5fb4c63d57986b8177be 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 39.946 T 09-03-2017 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 BV404_RS14670 eecf513ea90e5fb4c63d57986b8177be 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 09-03-2017 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 BV404_RS14670 eecf513ea90e5fb4c63d57986b8177be 276 Gene3D G3DSA:3.10.310.10 4 122 6.1E-50 T 09-03-2017 BV404_RS14670 eecf513ea90e5fb4c63d57986b8177be 276 Pfam PF01678 Diaminopimelate epimerase 5 124 5.5E-34 T 09-03-2017 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 BV404_RS14670 eecf513ea90e5fb4c63d57986b8177be 276 Pfam PF01678 Diaminopimelate epimerase 154 269 2.9E-33 T 09-03-2017 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 BV404_RS14670 eecf513ea90e5fb4c63d57986b8177be 276 SUPERFAMILY SSF54506 4 132 6.08E-49 T 09-03-2017 BV404_RS14670 eecf513ea90e5fb4c63d57986b8177be 276 Gene3D G3DSA:3.10.310.10 123 264 3.6E-52 T 09-03-2017 BV404_RS14670 eecf513ea90e5fb4c63d57986b8177be 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 274 2.1E-103 T 09-03-2017 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 BV404_RS14400 c19ec2334fc78d3bab1a8736eb1c1d84 573 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 3 553 60.791 T 09-03-2017 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 BV404_RS14400 c19ec2334fc78d3bab1a8736eb1c1d84 573 Gene3D G3DSA:3.50.50.60 189 315 3.8E-121 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS14400 c19ec2334fc78d3bab1a8736eb1c1d84 573 Gene3D G3DSA:3.50.50.60 2 126 3.8E-121 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS14400 c19ec2334fc78d3bab1a8736eb1c1d84 573 Gene3D G3DSA:3.50.50.60 467 532 3.8E-121 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS14400 c19ec2334fc78d3bab1a8736eb1c1d84 573 Pfam PF00732 GMC oxidoreductase 5 297 1.0E-91 T 09-03-2017 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 BV404_RS14400 c19ec2334fc78d3bab1a8736eb1c1d84 573 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 82 105 - T 09-03-2017 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 BV404_RS14400 c19ec2334fc78d3bab1a8736eb1c1d84 573 PIRSF PIRSF000137 1 538 1.4E-141 T 09-03-2017 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 BV404_RS14400 c19ec2334fc78d3bab1a8736eb1c1d84 573 SUPERFAMILY SSF51905 473 534 2.22E-88 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS14400 c19ec2334fc78d3bab1a8736eb1c1d84 573 SUPERFAMILY SSF51905 1 290 2.22E-88 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS14400 c19ec2334fc78d3bab1a8736eb1c1d84 573 SUPERFAMILY SSF54373 292 474 5.59E-60 T 09-03-2017 BV404_RS14400 c19ec2334fc78d3bab1a8736eb1c1d84 573 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 256 270 - T 09-03-2017 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 BV404_RS14400 c19ec2334fc78d3bab1a8736eb1c1d84 573 Pfam PF05199 GMC oxidoreductase 388 526 1.1E-37 T 09-03-2017 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 BV404_RS14400 c19ec2334fc78d3bab1a8736eb1c1d84 573 TIGRFAM TIGR01810 betA: choline dehydrogenase 6 536 3.1E-240 T 09-03-2017 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 BV404_RS05505 64ec08a277654c6731fe2934de793a7a 871 Gene3D G3DSA:2.20.25.90 6 53 1.6E-14 T 09-03-2017 BV404_RS05505 64ec08a277654c6731fe2934de793a7a 871 Gene3D G3DSA:3.40.228.10 127 314 2.4E-48 T 09-03-2017 BV404_RS05505 64ec08a277654c6731fe2934de793a7a 871 SUPERFAMILY SSF53706 7 562 3.01E-164 T 09-03-2017 BV404_RS05505 64ec08a277654c6731fe2934de793a7a 871 Pfam PF04324 BFD-like [2Fe-2S] binding domain 812 861 5.4E-13 T 09-03-2017 IPR007419 BFD-like [2Fe-2S]-binding domain BV404_RS05505 64ec08a277654c6731fe2934de793a7a 871 SUPERFAMILY SSF50692 548 690 4.52E-24 T 09-03-2017 IPR009010 Aspartate decarboxylase-like domain BV404_RS05505 64ec08a277654c6731fe2934de793a7a 871 Pfam PF00384 Molybdopterin oxidoreductase 55 476 7.3E-70 T 09-03-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BV404_RS05505 64ec08a277654c6731fe2934de793a7a 871 Pfam PF01568 Molydopterin dinucleotide binding domain 573 683 1.1E-18 T 09-03-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 BV404_RS05505 64ec08a277654c6731fe2934de793a7a 871 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 8 25 - T 09-03-2017 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 BV404_RS05505 64ec08a277654c6731fe2934de793a7a 871 SMART SM00926 3 52 9.3E-12 T 09-03-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BV404_RS05505 64ec08a277654c6731fe2934de793a7a 871 Gene3D G3DSA:2.40.40.20 572 691 3.0E-28 T 09-03-2017 BV404_RS05505 64ec08a277654c6731fe2934de793a7a 871 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 8 51 6.8E-13 T 09-03-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BV404_RS05505 64ec08a277654c6731fe2934de793a7a 871 Gene3D G3DSA:3.40.50.740 55 126 4.2E-82 T 09-03-2017 BV404_RS05505 64ec08a277654c6731fe2934de793a7a 871 Gene3D G3DSA:3.40.50.740 315 560 4.2E-82 T 09-03-2017 BV404_RS01135 eaafd45ba7ee507e2789ef106f7af48c 299 TIGRFAM TIGR03899 TIGR03899: TIGR03899 family protein 37 286 3.1E-104 T 09-03-2017 IPR021254 Protein of unknown function DUF2806 BV404_RS01135 eaafd45ba7ee507e2789ef106f7af48c 299 Pfam PF10987 Protein of unknown function (DUF2806) 58 276 5.1E-83 T 09-03-2017 IPR021254 Protein of unknown function DUF2806 BV404_RS01045 daf9905b71dd96e56df0479d1a2979d2 118 PIRSF PIRSF002134 1 118 8.6E-41 T 09-03-2017 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS01045 daf9905b71dd96e56df0479d1a2979d2 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 25.579 T 09-03-2017 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS01045 daf9905b71dd96e56df0479d1a2979d2 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 09-03-2017 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS01045 daf9905b71dd96e56df0479d1a2979d2 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 2.8E-53 T 09-03-2017 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS01045 daf9905b71dd96e56df0479d1a2979d2 118 Gene3D G3DSA:4.10.910.10 72 118 3.5E-27 T 09-03-2017 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS01045 daf9905b71dd96e56df0479d1a2979d2 118 Gene3D G3DSA:1.10.8.50 2 71 2.1E-27 T 09-03-2017 BV404_RS01045 daf9905b71dd96e56df0479d1a2979d2 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 7.1E-32 T 09-03-2017 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS01045 daf9905b71dd96e56df0479d1a2979d2 118 SUPERFAMILY SSF46946 2 114 5.15E-45 T 09-03-2017 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 BV404_RS05680 f05a1df24dea8b331ea09d16be065ec4 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 34.589 T 09-03-2017 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 BV404_RS05680 f05a1df24dea8b331ea09d16be065ec4 245 Pfam PF00977 Histidine biosynthesis protein 1 234 3.5E-75 T 09-03-2017 IPR006062 Histidine biosynthesis GO:0000105 BV404_RS05680 f05a1df24dea8b331ea09d16be065ec4 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 1.2E-77 T 09-03-2017 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 BV404_RS05680 f05a1df24dea8b331ea09d16be065ec4 245 SUPERFAMILY SSF51366 1 242 8.75E-63 T 09-03-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 BV404_RS05680 f05a1df24dea8b331ea09d16be065ec4 245 Gene3D G3DSA:3.20.20.70 1 242 8.1E-76 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS04015 c285919e9fbde4822727cde3c52bd964 111 PIRSF PIRSF005894 1 107 8.0E-52 T 09-03-2017 IPR014434 Monothiol glutaredoxin BV404_RS04015 c285919e9fbde4822727cde3c52bd964 111 Pfam PF00462 Glutaredoxin 16 80 4.0E-16 T 09-03-2017 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 BV404_RS04015 c285919e9fbde4822727cde3c52bd964 111 SUPERFAMILY SSF52833 1 104 6.72E-33 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS04015 c285919e9fbde4822727cde3c52bd964 111 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 8.0E-46 T 09-03-2017 IPR004480 Monothiol glutaredoxin-related BV404_RS04015 c285919e9fbde4822727cde3c52bd964 111 Gene3D G3DSA:3.40.30.10 7 102 9.0E-31 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS12865 deaa3714c0bc92eb1f82f3129d5ec930 698 SUPERFAMILY SSF54980 407 485 2.91E-25 T 09-03-2017 IPR009022 Elongation factor G, III-V domain BV404_RS12865 deaa3714c0bc92eb1f82f3129d5ec930 698 PRINTS PR00315 GTP-binding elongation factor signature 101 112 9.4E-17 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BV404_RS12865 deaa3714c0bc92eb1f82f3129d5ec930 698 PRINTS PR00315 GTP-binding elongation factor signature 12 25 9.4E-17 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BV404_RS12865 deaa3714c0bc92eb1f82f3129d5ec930 698 PRINTS PR00315 GTP-binding elongation factor signature 85 95 9.4E-17 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BV404_RS12865 deaa3714c0bc92eb1f82f3129d5ec930 698 PRINTS PR00315 GTP-binding elongation factor signature 137 146 9.4E-17 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BV404_RS12865 deaa3714c0bc92eb1f82f3129d5ec930 698 PRINTS PR00315 GTP-binding elongation factor signature 58 66 9.4E-17 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BV404_RS12865 deaa3714c0bc92eb1f82f3129d5ec930 698 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 8.9E-35 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 BV404_RS12865 deaa3714c0bc92eb1f82f3129d5ec930 698 SMART SM00838 605 693 2.7E-58 T 09-03-2017 IPR000640 Translation elongation factor EFG, V domain BV404_RS12865 deaa3714c0bc92eb1f82f3129d5ec930 698 Gene3D G3DSA:3.30.230.10 489 604 3.9E-52 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BV404_RS12865 deaa3714c0bc92eb1f82f3129d5ec930 698 Pfam PF03764 Elongation factor G, domain IV 484 603 8.8E-48 T 09-03-2017 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 BV404_RS12865 deaa3714c0bc92eb1f82f3129d5ec930 698 Gene3D G3DSA:2.40.30.10 310 410 2.2E-39 T 09-03-2017 BV404_RS12865 deaa3714c0bc92eb1f82f3129d5ec930 698 SMART SM00889 485 603 3.3E-75 T 09-03-2017 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 BV404_RS12865 deaa3714c0bc92eb1f82f3129d5ec930 698 Gene3D G3DSA:3.30.70.870 411 485 7.2E-39 T 09-03-2017 BV404_RS12865 deaa3714c0bc92eb1f82f3129d5ec930 698 Hamap MF_00054_B Elongation factor G [fusA]. 6 697 112.044 T 09-03-2017 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BV404_RS12865 deaa3714c0bc92eb1f82f3129d5ec930 698 Pfam PF03144 Elongation factor Tu domain 2 329 396 5.3E-18 T 09-03-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 BV404_RS12865 deaa3714c0bc92eb1f82f3129d5ec930 698 SUPERFAMILY SSF50447 271 409 1.52E-36 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain BV404_RS12865 deaa3714c0bc92eb1f82f3129d5ec930 698 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 697 0.0 T 09-03-2017 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BV404_RS12865 deaa3714c0bc92eb1f82f3129d5ec930 698 Gene3D G3DSA:3.30.70.240 605 691 2.3E-33 T 09-03-2017 IPR000640 Translation elongation factor EFG, V domain BV404_RS12865 deaa3714c0bc92eb1f82f3129d5ec930 698 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 09-03-2017 IPR031157 Tr-type G domain, conserved site BV404_RS12865 deaa3714c0bc92eb1f82f3129d5ec930 698 Gene3D G3DSA:3.40.50.300 6 293 4.7E-106 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS12865 deaa3714c0bc92eb1f82f3129d5ec930 698 Pfam PF00679 Elongation factor G C-terminus 605 692 9.5E-32 T 09-03-2017 IPR000640 Translation elongation factor EFG, V domain BV404_RS12865 deaa3714c0bc92eb1f82f3129d5ec930 698 SUPERFAMILY SSF52540 6 288 3.41E-108 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS12865 deaa3714c0bc92eb1f82f3129d5ec930 698 SUPERFAMILY SSF54211 484 604 7.84E-47 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold BV404_RS12865 deaa3714c0bc92eb1f82f3129d5ec930 698 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 3.5E-68 T 09-03-2017 BV404_RS12865 deaa3714c0bc92eb1f82f3129d5ec930 698 Pfam PF14492 Elongation Factor G, domain II 409 483 7.4E-34 T 09-03-2017 IPR009022 Elongation factor G, III-V domain BV404_RS12865 deaa3714c0bc92eb1f82f3129d5ec930 698 SUPERFAMILY SSF54980 608 695 1.49E-30 T 09-03-2017 IPR009022 Elongation factor G, III-V domain BV404_RS07010 97150d1d9963361cad58405b765e06d6 676 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 559 664 5.2E-20 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS07010 97150d1d9963361cad58405b765e06d6 676 SUPERFAMILY SSF103190 112 306 3.92E-15 T 09-03-2017 IPR029151 Periplasmic sensor domain-like BV404_RS07010 97150d1d9963361cad58405b765e06d6 676 PRINTS PR00344 Bacterial sensor protein C-terminal signature 626 644 1.8E-18 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS07010 97150d1d9963361cad58405b765e06d6 676 PRINTS PR00344 Bacterial sensor protein C-terminal signature 615 625 1.8E-18 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS07010 97150d1d9963361cad58405b765e06d6 676 PRINTS PR00344 Bacterial sensor protein C-terminal signature 597 611 1.8E-18 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS07010 97150d1d9963361cad58405b765e06d6 676 PRINTS PR00344 Bacterial sensor protein C-terminal signature 650 663 1.8E-18 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS07010 97150d1d9963361cad58405b765e06d6 676 SMART SM00388 445 512 6.3E-8 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS07010 97150d1d9963361cad58405b765e06d6 676 SUPERFAMILY SSF47384 440 509 4.51E-11 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS07010 97150d1d9963361cad58405b765e06d6 676 Pfam PF00512 His Kinase A (phospho-acceptor) domain 445 510 1.6E-11 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS07010 97150d1d9963361cad58405b765e06d6 676 Pfam PF00672 HAMP domain 323 392 2.3E-8 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 BV404_RS07010 97150d1d9963361cad58405b765e06d6 676 Gene3D G3DSA:1.10.287.130 441 497 1.7E-9 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS07010 97150d1d9963361cad58405b765e06d6 676 SUPERFAMILY SSF55874 502 664 9.04E-36 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS07010 97150d1d9963361cad58405b765e06d6 676 Pfam PF17202 Single cache domain 3 201 313 8.4E-27 T 09-03-2017 IPR033463 Single cache domain 3 BV404_RS07010 97150d1d9963361cad58405b765e06d6 676 SMART SM00387 555 666 7.6E-29 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS07010 97150d1d9963361cad58405b765e06d6 676 Gene3D G3DSA:3.30.565.10 498 665 4.2E-36 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS02040 777842084f350dab2ea10611b6aa7373 820 Pfam PF00270 DEAD/DEAH box helicase 8 162 1.8E-8 T 09-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BV404_RS02040 777842084f350dab2ea10611b6aa7373 820 SMART SM00490 226 327 1.2E-12 T 09-03-2017 IPR001650 Helicase, C-terminal BV404_RS02040 777842084f350dab2ea10611b6aa7373 820 Gene3D G3DSA:3.40.50.300 3 160 1.6E-44 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS02040 777842084f350dab2ea10611b6aa7373 820 Gene3D G3DSA:3.40.50.300 200 340 1.4E-13 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS02040 777842084f350dab2ea10611b6aa7373 820 Pfam PF08482 ATP-dependent helicase C-terminal 673 805 5.6E-51 T 09-03-2017 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal BV404_RS02040 777842084f350dab2ea10611b6aa7373 820 PIRSF PIRSF005496 1 819 0.0 T 09-03-2017 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type BV404_RS02040 777842084f350dab2ea10611b6aa7373 820 Pfam PF04408 Helicase associated domain (HA2) 388 447 5.3E-10 T 09-03-2017 IPR007502 Helicase-associated domain GO:0004386 BV404_RS02040 777842084f350dab2ea10611b6aa7373 820 SMART SM00487 5 190 1.2E-10 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain BV404_RS02040 777842084f350dab2ea10611b6aa7373 820 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 817 0.0 T 09-03-2017 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type BV404_RS02040 777842084f350dab2ea10611b6aa7373 820 SUPERFAMILY SSF52540 28 434 3.89E-48 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS02040 777842084f350dab2ea10611b6aa7373 820 SMART SM00847 387 481 7.7E-7 T 09-03-2017 IPR007502 Helicase-associated domain GO:0004386 BV404_RS02040 777842084f350dab2ea10611b6aa7373 820 Pfam PF00271 Helicase conserved C-terminal domain 204 326 6.2E-11 T 09-03-2017 IPR001650 Helicase, C-terminal BV404_RS09615 b88f4c69f7a195fa3e104286fba8108c 432 SMART SM00086 92 135 31.0 T 09-03-2017 IPR001610 PAC motif BV404_RS09615 b88f4c69f7a195fa3e104286fba8108c 432 SMART SM00086 213 255 6.5E-5 T 09-03-2017 IPR001610 PAC motif BV404_RS09615 b88f4c69f7a195fa3e104286fba8108c 432 SMART SM00283 230 431 2.1E-20 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 BV404_RS09615 b88f4c69f7a195fa3e104286fba8108c 432 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 324 351 2.0E-20 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 BV404_RS09615 b88f4c69f7a195fa3e104286fba8108c 432 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 353 382 2.0E-20 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 BV404_RS09615 b88f4c69f7a195fa3e104286fba8108c 432 SUPERFAMILY SSF58104 245 430 3.4E-50 T 09-03-2017 BV404_RS09615 b88f4c69f7a195fa3e104286fba8108c 432 Gene3D G3DSA:3.30.450.20 32 134 7.9E-15 T 09-03-2017 BV404_RS09615 b88f4c69f7a195fa3e104286fba8108c 432 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 283 431 1.3E-35 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 BV404_RS09615 b88f4c69f7a195fa3e104286fba8108c 432 SUPERFAMILY SSF55785 32 131 1.36E-16 T 09-03-2017 IPR000014 PAS domain BV404_RS09615 b88f4c69f7a195fa3e104286fba8108c 432 Pfam PF08447 PAS fold 45 128 1.3E-8 T 09-03-2017 IPR013655 PAS fold-3 GO:0005515 BV404_RS09615 b88f4c69f7a195fa3e104286fba8108c 432 Pfam PF08447 PAS fold 165 247 2.6E-10 T 09-03-2017 IPR013655 PAS fold-3 GO:0005515 BV404_RS09615 b88f4c69f7a195fa3e104286fba8108c 432 Gene3D G3DSA:1.10.287.950 253 429 2.0E-42 T 09-03-2017 BV404_RS09615 b88f4c69f7a195fa3e104286fba8108c 432 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 30 136 3.2E-9 T 09-03-2017 IPR000014 PAS domain BV404_RS09615 b88f4c69f7a195fa3e104286fba8108c 432 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 145 258 3.7E-13 T 09-03-2017 IPR000014 PAS domain BV404_RS09615 b88f4c69f7a195fa3e104286fba8108c 432 Gene3D G3DSA:3.30.450.20 144 252 3.2E-19 T 09-03-2017 BV404_RS09615 b88f4c69f7a195fa3e104286fba8108c 432 SUPERFAMILY SSF55785 153 256 7.15E-22 T 09-03-2017 IPR000014 PAS domain BV404_RS02585 7abc16c79d28de1cdf33ba7f2403cd02 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 854 0.0 T 09-03-2017 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 BV404_RS02585 7abc16c79d28de1cdf33ba7f2403cd02 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 2.3E-13 T 09-03-2017 IPR004176 Clp, N-terminal GO:0019538 BV404_RS02585 7abc16c79d28de1cdf33ba7f2403cd02 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 5.7E-12 T 09-03-2017 IPR004176 Clp, N-terminal GO:0019538 BV404_RS02585 7abc16c79d28de1cdf33ba7f2403cd02 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 09-03-2017 IPR018368 ClpA/B, conserved site 1 GO:0005524 BV404_RS02585 7abc16c79d28de1cdf33ba7f2403cd02 857 SMART SM00382 597 768 2.1E-9 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS02585 7abc16c79d28de1cdf33ba7f2403cd02 857 SMART SM00382 198 343 9.6E-13 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS02585 7abc16c79d28de1cdf33ba7f2403cd02 857 Gene3D G3DSA:1.10.8.60 778 855 1.6E-31 T 09-03-2017 BV404_RS02585 7abc16c79d28de1cdf33ba7f2403cd02 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 335 2.0E-13 T 09-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 BV404_RS02585 7abc16c79d28de1cdf33ba7f2403cd02 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 845 5.8E-27 T 09-03-2017 IPR019489 Clp ATPase, C-terminal BV404_RS02585 7abc16c79d28de1cdf33ba7f2403cd02 857 SUPERFAMILY SSF52540 159 545 1.06E-100 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS02585 7abc16c79d28de1cdf33ba7f2403cd02 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 759 1.7E-57 T 09-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 BV404_RS02585 7abc16c79d28de1cdf33ba7f2403cd02 857 SUPERFAMILY SSF81923 4 156 1.08E-40 T 09-03-2017 IPR004176 Clp, N-terminal GO:0019538 BV404_RS02585 7abc16c79d28de1cdf33ba7f2403cd02 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 4.3E-42 T 09-03-2017 IPR001270 ClpA/B family GO:0005524 BV404_RS02585 7abc16c79d28de1cdf33ba7f2403cd02 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 4.3E-42 T 09-03-2017 IPR001270 ClpA/B family GO:0005524 BV404_RS02585 7abc16c79d28de1cdf33ba7f2403cd02 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 4.3E-42 T 09-03-2017 IPR001270 ClpA/B family GO:0005524 BV404_RS02585 7abc16c79d28de1cdf33ba7f2403cd02 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 4.3E-42 T 09-03-2017 IPR001270 ClpA/B family GO:0005524 BV404_RS02585 7abc16c79d28de1cdf33ba7f2403cd02 857 Gene3D G3DSA:3.40.50.300 550 777 1.3E-58 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS02585 7abc16c79d28de1cdf33ba7f2403cd02 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 09-03-2017 IPR028299 ClpA/B, conserved site 2 BV404_RS02585 7abc16c79d28de1cdf33ba7f2403cd02 857 SUPERFAMILY SSF52540 546 851 3.69E-83 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS02585 7abc16c79d28de1cdf33ba7f2403cd02 857 SMART SM01086 766 855 1.2E-37 T 09-03-2017 IPR019489 Clp ATPase, C-terminal BV404_RS02585 7abc16c79d28de1cdf33ba7f2403cd02 857 Gene3D G3DSA:1.10.1780.10 1 148 5.5E-45 T 09-03-2017 IPR004176 Clp, N-terminal GO:0019538 BV404_RS02585 7abc16c79d28de1cdf33ba7f2403cd02 857 Gene3D G3DSA:1.10.8.60 343 428 1.2E-36 T 09-03-2017 BV404_RS02585 7abc16c79d28de1cdf33ba7f2403cd02 857 Gene3D G3DSA:3.40.50.300 160 342 5.2E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS06755 313d33339affcd6dcfd75665d6e6c30d 625 SUPERFAMILY SSF56801 4 623 2.22E-156 T 09-03-2017 BV404_RS06755 313d33339affcd6dcfd75665d6e6c30d 625 Pfam PF13193 AMP-binding enzyme C-terminal domain 510 589 2.7E-25 T 09-03-2017 IPR025110 AMP-binding enzyme C-terminal domain BV404_RS06755 313d33339affcd6dcfd75665d6e6c30d 625 Gene3D G3DSA:3.30.300.30 496 599 1.1E-23 T 09-03-2017 BV404_RS06755 313d33339affcd6dcfd75665d6e6c30d 625 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 4 56 7.9E-12 T 09-03-2017 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 BV404_RS06755 313d33339affcd6dcfd75665d6e6c30d 625 Gene3D G3DSA:2.30.38.10 413 492 3.6E-9 T 09-03-2017 BV404_RS06755 313d33339affcd6dcfd75665d6e6c30d 625 Pfam PF00501 AMP-binding enzyme 66 501 1.0E-82 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 BV404_RS06755 313d33339affcd6dcfd75665d6e6c30d 625 Gene3D G3DSA:3.40.50.980 67 242 5.9E-35 T 09-03-2017 BV404_RS06755 313d33339affcd6dcfd75665d6e6c30d 625 Gene3D G3DSA:3.40.50.980 243 403 2.1E-29 T 09-03-2017 BV404_RS06755 313d33339affcd6dcfd75665d6e6c30d 625 ProSitePatterns PS00455 Putative AMP-binding domain signature. 237 248 - T 09-03-2017 IPR020845 AMP-binding, conserved site BV404_RS01740 1b0b924801c1a6cb71016d5516333e9c 597 SUPERFAMILY SSF54980 399 493 3.79E-24 T 09-03-2017 IPR009022 Elongation factor G, III-V domain BV404_RS01740 1b0b924801c1a6cb71016d5516333e9c 597 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 2.5E-49 T 09-03-2017 IPR013842 GTP-binding protein LepA, C-terminal BV404_RS01740 1b0b924801c1a6cb71016d5516333e9c 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 306.915 T 09-03-2017 IPR006297 Elongation factor 4 GO:0005525 BV404_RS01740 1b0b924801c1a6cb71016d5516333e9c 597 Gene3D G3DSA:3.30.70.870 291 369 8.9E-26 T 09-03-2017 BV404_RS01740 1b0b924801c1a6cb71016d5516333e9c 597 PRINTS PR00315 GTP-binding elongation factor signature 6 19 3.8E-14 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BV404_RS01740 1b0b924801c1a6cb71016d5516333e9c 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 3.8E-14 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BV404_RS01740 1b0b924801c1a6cb71016d5516333e9c 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 3.8E-14 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BV404_RS01740 1b0b924801c1a6cb71016d5516333e9c 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 3.8E-14 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BV404_RS01740 1b0b924801c1a6cb71016d5516333e9c 597 PRINTS PR00315 GTP-binding elongation factor signature 49 57 3.8E-14 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BV404_RS01740 1b0b924801c1a6cb71016d5516333e9c 597 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 3.6E-301 T 09-03-2017 IPR006297 Elongation factor 4 GO:0005525 BV404_RS01740 1b0b924801c1a6cb71016d5516333e9c 597 Pfam PF03144 Elongation factor Tu domain 2 205 275 6.0E-10 T 09-03-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 BV404_RS01740 1b0b924801c1a6cb71016d5516333e9c 597 Pfam PF00679 Elongation factor G C-terminus 399 482 1.5E-19 T 09-03-2017 IPR000640 Translation elongation factor EFG, V domain BV404_RS01740 1b0b924801c1a6cb71016d5516333e9c 597 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 09-03-2017 IPR031157 Tr-type G domain, conserved site BV404_RS01740 1b0b924801c1a6cb71016d5516333e9c 597 Gene3D G3DSA:2.40.30.10 193 289 5.2E-24 T 09-03-2017 BV404_RS01740 1b0b924801c1a6cb71016d5516333e9c 597 SMART SM00838 398 486 0.0095 T 09-03-2017 IPR000640 Translation elongation factor EFG, V domain BV404_RS01740 1b0b924801c1a6cb71016d5516333e9c 597 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 176 8.6E-17 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 BV404_RS01740 1b0b924801c1a6cb71016d5516333e9c 597 SUPERFAMILY SSF54980 292 370 1.55E-18 T 09-03-2017 IPR009022 Elongation factor G, III-V domain BV404_RS01740 1b0b924801c1a6cb71016d5516333e9c 597 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 8.8E-53 T 09-03-2017 BV404_RS01740 1b0b924801c1a6cb71016d5516333e9c 597 Gene3D G3DSA:3.40.50.300 2 192 5.0E-61 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS01740 1b0b924801c1a6cb71016d5516333e9c 597 SUPERFAMILY SSF52540 2 233 2.66E-56 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS01740 1b0b924801c1a6cb71016d5516333e9c 597 Gene3D G3DSA:3.30.70.240 401 489 1.4E-20 T 09-03-2017 IPR000640 Translation elongation factor EFG, V domain BV404_RS12645 6d1e02fdf5aca806055aa83e39fd3af3 664 Pfam PF00563 EAL domain 427 636 5.1E-40 T 09-03-2017 IPR001633 EAL domain BV404_RS12645 6d1e02fdf5aca806055aa83e39fd3af3 664 SUPERFAMILY SSF55073 233 386 5.65E-15 T 09-03-2017 IPR029787 Nucleotide cyclase BV404_RS12645 6d1e02fdf5aca806055aa83e39fd3af3 664 SMART SM00267 216 386 8.8E-7 T 09-03-2017 IPR000160 GGDEF domain BV404_RS12645 6d1e02fdf5aca806055aa83e39fd3af3 664 Gene3D G3DSA:3.20.20.450 401 636 1.5E-35 T 09-03-2017 IPR001633 EAL domain BV404_RS12645 6d1e02fdf5aca806055aa83e39fd3af3 664 Gene3D G3DSA:3.30.70.270 230 388 2.3E-16 T 09-03-2017 BV404_RS12645 6d1e02fdf5aca806055aa83e39fd3af3 664 SUPERFAMILY SSF141868 406 636 6.02E-38 T 09-03-2017 IPR001633 EAL domain BV404_RS12645 6d1e02fdf5aca806055aa83e39fd3af3 664 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 40 134 3.3E-30 T 09-03-2017 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 BV404_RS12645 6d1e02fdf5aca806055aa83e39fd3af3 664 Pfam PF00990 Diguanylate cyclase, GGDEF domain 229 381 9.5E-16 T 09-03-2017 IPR000160 GGDEF domain BV404_RS12645 6d1e02fdf5aca806055aa83e39fd3af3 664 SMART SM00052 397 651 4.0E-18 T 09-03-2017 IPR001633 EAL domain BV404_RS11975 c1252681b417bff75739a373c6809127 158 Pfam PF02542 YgbB family 2 155 1.7E-65 T 09-03-2017 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 BV404_RS11975 c1252681b417bff75739a373c6809127 158 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 09-03-2017 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 BV404_RS11975 c1252681b417bff75739a373c6809127 158 Gene3D G3DSA:3.30.1330.50 1 157 2.5E-72 T 09-03-2017 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 BV404_RS11975 c1252681b417bff75739a373c6809127 158 SUPERFAMILY SSF69765 1 157 1.01E-65 T 09-03-2017 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 BV404_RS11975 c1252681b417bff75739a373c6809127 158 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 36.144 T 09-03-2017 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 BV404_RS11975 c1252681b417bff75739a373c6809127 158 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 157 1.8E-69 T 09-03-2017 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 BV404_RS07715 c4cc544f6c53855e2f08723a761b08cf 399 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 223 237 - T 09-03-2017 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site BV404_RS07715 c4cc544f6c53855e2f08723a761b08cf 399 PRINTS PR01182 Ornithine decarboxylase signature 353 366 1.6E-18 T 09-03-2017 IPR002433 Ornithine decarboxylase GO:0006596 BV404_RS07715 c4cc544f6c53855e2f08723a761b08cf 399 PRINTS PR01182 Ornithine decarboxylase signature 61 88 1.6E-18 T 09-03-2017 IPR002433 Ornithine decarboxylase GO:0006596 BV404_RS07715 c4cc544f6c53855e2f08723a761b08cf 399 PRINTS PR01182 Ornithine decarboxylase signature 105 129 1.6E-18 T 09-03-2017 IPR002433 Ornithine decarboxylase GO:0006596 BV404_RS07715 c4cc544f6c53855e2f08723a761b08cf 399 PRINTS PR01182 Ornithine decarboxylase signature 302 315 1.6E-18 T 09-03-2017 IPR002433 Ornithine decarboxylase GO:0006596 BV404_RS07715 c4cc544f6c53855e2f08723a761b08cf 399 PRINTS PR01182 Ornithine decarboxylase signature 35 59 1.6E-18 T 09-03-2017 IPR002433 Ornithine decarboxylase GO:0006596 BV404_RS07715 c4cc544f6c53855e2f08723a761b08cf 399 PRINTS PR01182 Ornithine decarboxylase signature 333 343 1.6E-18 T 09-03-2017 IPR002433 Ornithine decarboxylase GO:0006596 BV404_RS07715 c4cc544f6c53855e2f08723a761b08cf 399 PRINTS PR01182 Ornithine decarboxylase signature 135 157 1.6E-18 T 09-03-2017 IPR002433 Ornithine decarboxylase GO:0006596 BV404_RS07715 c4cc544f6c53855e2f08723a761b08cf 399 Gene3D G3DSA:2.40.37.10 265 389 3.1E-37 T 09-03-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BV404_RS07715 c4cc544f6c53855e2f08723a761b08cf 399 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 44 278 5.9E-54 T 09-03-2017 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 BV404_RS07715 c4cc544f6c53855e2f08723a761b08cf 399 SUPERFAMILY SSF51419 41 278 1.09E-59 T 09-03-2017 IPR029066 PLP-binding barrel BV404_RS07715 c4cc544f6c53855e2f08723a761b08cf 399 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 63 81 6.1E-21 T 09-03-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BV404_RS07715 c4cc544f6c53855e2f08723a761b08cf 399 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 366 379 6.1E-21 T 09-03-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BV404_RS07715 c4cc544f6c53855e2f08723a761b08cf 399 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 83 95 6.1E-21 T 09-03-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BV404_RS07715 c4cc544f6c53855e2f08723a761b08cf 399 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 185 198 6.1E-21 T 09-03-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BV404_RS07715 c4cc544f6c53855e2f08723a761b08cf 399 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 267 286 6.1E-21 T 09-03-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BV404_RS07715 c4cc544f6c53855e2f08723a761b08cf 399 SUPERFAMILY SSF50621 262 386 3.56E-34 T 09-03-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BV404_RS07715 c4cc544f6c53855e2f08723a761b08cf 399 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 289 385 1.1E-23 T 09-03-2017 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 BV404_RS07715 c4cc544f6c53855e2f08723a761b08cf 399 Gene3D G3DSA:3.20.20.10 43 264 2.4E-63 T 09-03-2017 IPR029066 PLP-binding barrel BV404_RS10490 d6d1b35745541a645537c4582ebdf973 185 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 4 178 2.2E-80 T 09-03-2017 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 BV404_RS10490 d6d1b35745541a645537c4582ebdf973 185 PIRSF PIRSF004682 1 185 6.7E-64 T 09-03-2017 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 BV404_RS10490 d6d1b35745541a645537c4582ebdf973 185 Pfam PF13242 HAD-hyrolase-like 107 176 2.1E-12 T 09-03-2017 BV404_RS10490 d6d1b35745541a645537c4582ebdf973 185 Gene3D G3DSA:3.40.50.1000 3 181 1.8E-59 T 09-03-2017 IPR023214 HAD-like domain BV404_RS10490 d6d1b35745541a645537c4582ebdf973 185 SUPERFAMILY SSF56784 4 182 2.38E-48 T 09-03-2017 IPR023214 HAD-like domain BV404_RS10490 d6d1b35745541a645537c4582ebdf973 185 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 152 5.8E-39 T 09-03-2017 IPR006543 Histidinol-phosphate phosphatase GO:0016791 BV404_RS10490 d6d1b35745541a645537c4582ebdf973 185 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 5 154 6.8E-36 T 09-03-2017 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 BV404_RS12035 1d7d5fb7c022c36d401b45e4627178a6 625 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 584 610 - T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS12035 1d7d5fb7c022c36d401b45e4627178a6 625 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 415 428 - T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS12035 1d7d5fb7c022c36d401b45e4627178a6 625 Gene3D G3DSA:1.10.10.10 556 624 5.7E-33 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS12035 1d7d5fb7c022c36d401b45e4627178a6 625 Pfam PF04546 Sigma-70, non-essential region 139 360 9.4E-67 T 09-03-2017 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS12035 1d7d5fb7c022c36d401b45e4627178a6 625 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 1.1E-12 T 09-03-2017 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS12035 1d7d5fb7c022c36d401b45e4627178a6 625 SUPERFAMILY SSF88946 115 458 4.32E-97 T 09-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS12035 1d7d5fb7c022c36d401b45e4627178a6 625 Pfam PF04545 Sigma-70, region 4 559 612 1.5E-19 T 09-03-2017 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS12035 1d7d5fb7c022c36d401b45e4627178a6 625 Pfam PF04542 Sigma-70 region 2 391 460 1.8E-21 T 09-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS12035 1d7d5fb7c022c36d401b45e4627178a6 625 SUPERFAMILY SSF88659 464 537 2.25E-20 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS12035 1d7d5fb7c022c36d401b45e4627178a6 625 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 387 612 1.2E-37 T 09-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS12035 1d7d5fb7c022c36d401b45e4627178a6 625 Gene3D G3DSA:1.10.10.10 464 515 1.3E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS12035 1d7d5fb7c022c36d401b45e4627178a6 625 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 624 46.229 T 09-03-2017 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 BV404_RS12035 1d7d5fb7c022c36d401b45e4627178a6 625 Pfam PF03979 Sigma-70 factor, region 1.1 4 80 2.6E-28 T 09-03-2017 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 BV404_RS12035 1d7d5fb7c022c36d401b45e4627178a6 625 Pfam PF04539 Sigma-70 region 3 470 545 1.3E-28 T 09-03-2017 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS12035 1d7d5fb7c022c36d401b45e4627178a6 625 PRINTS PR00046 Major sigma-70 factor signature 599 610 3.3E-31 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS12035 1d7d5fb7c022c36d401b45e4627178a6 625 PRINTS PR00046 Major sigma-70 factor signature 415 428 3.3E-31 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS12035 1d7d5fb7c022c36d401b45e4627178a6 625 PRINTS PR00046 Major sigma-70 factor signature 439 447 3.3E-31 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS12035 1d7d5fb7c022c36d401b45e4627178a6 625 PRINTS PR00046 Major sigma-70 factor signature 584 599 3.3E-31 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS12035 1d7d5fb7c022c36d401b45e4627178a6 625 PRINTS PR00046 Major sigma-70 factor signature 563 575 3.3E-31 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS12035 1d7d5fb7c022c36d401b45e4627178a6 625 SUPERFAMILY SSF88659 521 623 1.13E-25 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS12035 1d7d5fb7c022c36d401b45e4627178a6 625 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 387 623 1.9E-120 T 09-03-2017 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 BV404_RS12035 1d7d5fb7c022c36d401b45e4627178a6 625 Gene3D G3DSA:1.10.601.10 112 460 1.7E-133 T 09-03-2017 BV404_RS02015 48652f4e5922326c7475641476fde0fa 169 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 1.9E-45 T 09-03-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 BV404_RS02015 48652f4e5922326c7475641476fde0fa 169 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 1.3E-37 T 09-03-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 BV404_RS02015 48652f4e5922326c7475641476fde0fa 169 Gene3D G3DSA:3.30.70.560 3 153 2.8E-57 T 09-03-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 BV404_RS02015 48652f4e5922326c7475641476fde0fa 169 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 09-03-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 BV404_RS02015 48652f4e5922326c7475641476fde0fa 169 SUPERFAMILY SSF55083 1 158 4.97E-54 T 09-03-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 BV404_RS12860 d135f0a86d10294689a0b9bbd2d4ffca 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 3.4E-16 T 09-03-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 BV404_RS12860 d135f0a86d10294689a0b9bbd2d4ffca 394 Gene3D G3DSA:2.40.30.10 300 393 1.6E-46 T 09-03-2017 BV404_RS12860 d135f0a86d10294689a0b9bbd2d4ffca 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 7.2E-231 T 09-03-2017 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BV404_RS12860 d135f0a86d10294689a0b9bbd2d4ffca 394 Gene3D G3DSA:2.40.30.10 212 298 3.0E-35 T 09-03-2017 BV404_RS12860 d135f0a86d10294689a0b9bbd2d4ffca 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 7.0E-24 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BV404_RS12860 d135f0a86d10294689a0b9bbd2d4ffca 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 7.0E-24 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BV404_RS12860 d135f0a86d10294689a0b9bbd2d4ffca 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 7.0E-24 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BV404_RS12860 d135f0a86d10294689a0b9bbd2d4ffca 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 7.0E-24 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BV404_RS12860 d135f0a86d10294689a0b9bbd2d4ffca 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 7.0E-24 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BV404_RS12860 d135f0a86d10294689a0b9bbd2d4ffca 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.546 T 09-03-2017 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BV404_RS12860 d135f0a86d10294689a0b9bbd2d4ffca 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 5.1E-33 T 09-03-2017 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal BV404_RS12860 d135f0a86d10294689a0b9bbd2d4ffca 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 09-03-2017 IPR031157 Tr-type G domain, conserved site BV404_RS12860 d135f0a86d10294689a0b9bbd2d4ffca 394 SUPERFAMILY SSF50447 205 301 5.7E-30 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain BV404_RS12860 d135f0a86d10294689a0b9bbd2d4ffca 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 4.5E-14 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 BV404_RS12860 d135f0a86d10294689a0b9bbd2d4ffca 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 7.8E-58 T 09-03-2017 BV404_RS12860 d135f0a86d10294689a0b9bbd2d4ffca 394 SUPERFAMILY SSF50465 298 393 5.18E-35 T 09-03-2017 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal BV404_RS12860 d135f0a86d10294689a0b9bbd2d4ffca 394 SUPERFAMILY SSF52540 6 219 3.51E-60 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS12860 d135f0a86d10294689a0b9bbd2d4ffca 394 Gene3D G3DSA:3.40.50.300 4 211 6.3E-68 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09840 3a2302302b09e558a79b9b8a27b4255b 219 SUPERFAMILY SSF53098 10 208 3.04E-56 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 BV404_RS09840 3a2302302b09e558a79b9b8a27b4255b 219 Pfam PF00929 Exonuclease 20 195 4.9E-42 T 09-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III BV404_RS09840 3a2302302b09e558a79b9b8a27b4255b 219 Gene3D G3DSA:3.30.420.10 10 211 2.7E-59 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 BV404_RS09840 3a2302302b09e558a79b9b8a27b4255b 219 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 209 1.0E-98 T 09-03-2017 IPR005987 Ribonuclease T GO:0004540|GO:0006396 BV404_RS09840 3a2302302b09e558a79b9b8a27b4255b 219 Hamap MF_00157 Ribonuclease T [rnt]. 1 219 116.48 T 09-03-2017 IPR005987 Ribonuclease T GO:0004540|GO:0006396 BV404_RS09840 3a2302302b09e558a79b9b8a27b4255b 219 SMART SM00479 18 204 2.2E-29 T 09-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III BV404_RS10930 b35eea3342212dac98e661a6b130e7d0 64 Pfam PF04384 Iron-sulphur cluster assembly 1 63 3.5E-33 T 09-03-2017 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 BV404_RS10930 b35eea3342212dac98e661a6b130e7d0 64 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 64 8.0E-35 T 09-03-2017 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 BV404_RS10930 b35eea3342212dac98e661a6b130e7d0 64 PIRSF PIRSF039003 1 64 1.2E-34 T 09-03-2017 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 BV404_RS10930 b35eea3342212dac98e661a6b130e7d0 64 SUPERFAMILY SSF140319 1 62 2.88E-28 T 09-03-2017 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 BV404_RS10930 b35eea3342212dac98e661a6b130e7d0 64 Gene3D G3DSA:1.10.10.600 1 64 3.0E-34 T 09-03-2017 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 BV404_RS02230 2bef807687480b95040f1255e2c77dc7 446 Gene3D G3DSA:3.40.120.10 252 362 3.1E-32 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BV404_RS02230 2bef807687480b95040f1255e2c77dc7 446 Gene3D G3DSA:3.30.310.50 363 443 2.3E-15 T 09-03-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BV404_RS02230 2bef807687480b95040f1255e2c77dc7 446 SUPERFAMILY SSF53738 259 366 2.0E-30 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BV404_RS02230 2bef807687480b95040f1255e2c77dc7 446 SUPERFAMILY SSF53738 157 257 1.06E-29 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BV404_RS02230 2bef807687480b95040f1255e2c77dc7 446 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 4 445 47.28 T 09-03-2017 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BV404_RS02230 2bef807687480b95040f1255e2c77dc7 446 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 259 367 1.0E-31 T 09-03-2017 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BV404_RS02230 2bef807687480b95040f1255e2c77dc7 446 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 377 442 1.5E-12 T 09-03-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BV404_RS02230 2bef807687480b95040f1255e2c77dc7 446 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 136 4.6E-46 T 09-03-2017 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BV404_RS02230 2bef807687480b95040f1255e2c77dc7 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 250 5.5E-14 T 09-03-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BV404_RS02230 2bef807687480b95040f1255e2c77dc7 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 96 110 5.5E-14 T 09-03-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BV404_RS02230 2bef807687480b95040f1255e2c77dc7 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 175 194 5.5E-14 T 09-03-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BV404_RS02230 2bef807687480b95040f1255e2c77dc7 446 Gene3D G3DSA:3.40.120.10 177 251 2.6E-26 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BV404_RS02230 2bef807687480b95040f1255e2c77dc7 446 Gene3D G3DSA:3.40.120.10 5 151 4.1E-48 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BV404_RS02230 2bef807687480b95040f1255e2c77dc7 446 SUPERFAMILY SSF53738 4 182 2.59E-49 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BV404_RS02230 2bef807687480b95040f1255e2c77dc7 446 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 255 3.5E-20 T 09-03-2017 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BV404_RS02230 2bef807687480b95040f1255e2c77dc7 446 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 97 106 - T 09-03-2017 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BV404_RS02230 2bef807687480b95040f1255e2c77dc7 446 SUPERFAMILY SSF55957 358 443 4.84E-22 T 09-03-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BV404_RS02230 2bef807687480b95040f1255e2c77dc7 446 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 8 443 3.9E-203 T 09-03-2017 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BV404_RS10860 c805af80bfb88b5af8881c908e634d1d 517 Pfam PF00117 Glutamine amidotransferase class-I 12 191 3.1E-42 T 09-03-2017 IPR017926 Glutamine amidotransferase BV404_RS10860 c805af80bfb88b5af8881c908e634d1d 517 Gene3D G3DSA:3.40.50.620 215 391 6.4E-57 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS10860 c805af80bfb88b5af8881c908e634d1d 517 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 197 8.8E-84 T 09-03-2017 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 BV404_RS10860 c805af80bfb88b5af8881c908e634d1d 517 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 205 517 1.1E-155 T 09-03-2017 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 BV404_RS10860 c805af80bfb88b5af8881c908e634d1d 517 Gene3D G3DSA:3.30.300.10 393 517 3.6E-53 T 09-03-2017 BV404_RS10860 c805af80bfb88b5af8881c908e634d1d 517 SUPERFAMILY SSF52317 9 200 1.19E-57 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like BV404_RS10860 c805af80bfb88b5af8881c908e634d1d 517 Gene3D G3DSA:3.40.50.880 4 214 1.4E-62 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like BV404_RS10860 c805af80bfb88b5af8881c908e634d1d 517 SUPERFAMILY SSF54810 397 517 4.71E-51 T 09-03-2017 BV404_RS10860 c805af80bfb88b5af8881c908e634d1d 517 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 517 56.394 T 09-03-2017 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 BV404_RS10860 c805af80bfb88b5af8881c908e634d1d 517 Pfam PF00958 GMP synthase C terminal domain 425 516 1.2E-43 T 09-03-2017 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 BV404_RS10860 c805af80bfb88b5af8881c908e634d1d 517 SUPERFAMILY SSF52402 189 412 7.28E-58 T 09-03-2017 BV404_RS10860 c805af80bfb88b5af8881c908e634d1d 517 PRINTS PR00097 Anthranilate synthase component II signature 54 63 1.4E-6 T 09-03-2017 BV404_RS10860 c805af80bfb88b5af8881c908e634d1d 517 PRINTS PR00097 Anthranilate synthase component II signature 81 92 1.4E-6 T 09-03-2017 BV404_RS10860 c805af80bfb88b5af8881c908e634d1d 517 PRINTS PR00097 Anthranilate synthase component II signature 169 182 1.4E-6 T 09-03-2017 BV404_RS10860 c805af80bfb88b5af8881c908e634d1d 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 8.0E-8 T 09-03-2017 BV404_RS10860 c805af80bfb88b5af8881c908e634d1d 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 8.0E-8 T 09-03-2017 BV404_RS10860 c805af80bfb88b5af8881c908e634d1d 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 8.0E-8 T 09-03-2017 BV404_RS10860 c805af80bfb88b5af8881c908e634d1d 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 4.0E-6 T 09-03-2017 BV404_RS10860 c805af80bfb88b5af8881c908e634d1d 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 4.0E-6 T 09-03-2017 BV404_RS10860 c805af80bfb88b5af8881c908e634d1d 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 4.0E-6 T 09-03-2017 BV404_RS10860 c805af80bfb88b5af8881c908e634d1d 517 Pfam PF02540 NAD synthase 212 284 1.5E-7 T 09-03-2017 IPR022310 NAD/GMP synthase BV404_RS11540 653afb39e760d6f8d0f5cc810308f147 489 SUPERFAMILY SSF46548 2 155 1.31E-34 T 09-03-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 BV404_RS11540 653afb39e760d6f8d0f5cc810308f147 489 SUPERFAMILY SSF51971 143 407 5.18E-65 T 09-03-2017 BV404_RS11540 653afb39e760d6f8d0f5cc810308f147 489 SUPERFAMILY SSF51971 386 474 1.17E-7 T 09-03-2017 BV404_RS11540 653afb39e760d6f8d0f5cc810308f147 489 Gene3D G3DSA:3.50.50.60 234 407 2.6E-39 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS11540 653afb39e760d6f8d0f5cc810308f147 489 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 146 459 7.8E-25 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS11540 653afb39e760d6f8d0f5cc810308f147 489 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 38 131 2.2E-24 T 09-03-2017 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 BV404_RS11540 653afb39e760d6f8d0f5cc810308f147 489 Gene3D G3DSA:3.40.50.720 148 233 4.1E-38 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS11540 653afb39e760d6f8d0f5cc810308f147 489 Gene3D G3DSA:3.40.50.720 411 481 4.1E-38 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS11540 653afb39e760d6f8d0f5cc810308f147 489 PRINTS PR00419 Adrenodoxin reductase family signature 211 221 1.6E-23 T 09-03-2017 BV404_RS11540 653afb39e760d6f8d0f5cc810308f147 489 PRINTS PR00419 Adrenodoxin reductase family signature 169 182 1.6E-23 T 09-03-2017 BV404_RS11540 653afb39e760d6f8d0f5cc810308f147 489 PRINTS PR00419 Adrenodoxin reductase family signature 146 168 1.6E-23 T 09-03-2017 BV404_RS11540 653afb39e760d6f8d0f5cc810308f147 489 PRINTS PR00419 Adrenodoxin reductase family signature 286 300 1.6E-23 T 09-03-2017 BV404_RS11540 653afb39e760d6f8d0f5cc810308f147 489 Gene3D G3DSA:1.10.1060.10 3 147 1.8E-38 T 09-03-2017 BV404_RS11540 653afb39e760d6f8d0f5cc810308f147 489 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 478 9.0E-198 T 09-03-2017 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 BV404_RS08730 22938a385a7401a003b05e6d2a90eda7 89 Pfam PF07383 Protein of unknown function (DUF1496) 34 82 7.1E-22 T 09-03-2017 IPR009971 Protein of unknown function DUF1496 BV404_RS01850 8a7820fe44a4022d274d3c4ca7b36c57 948 Hamap MF_00802 Glutamate-ammonia-ligase adenylyltransferase [glnE]. 31 945 19.467 T 09-03-2017 IPR023057 Glutamate-ammonia-ligase adenylyltransferase GO:0008882 BV404_RS01850 8a7820fe44a4022d274d3c4ca7b36c57 948 Gene3D G3DSA:3.30.460.10 643 814 2.4E-60 T 09-03-2017 BV404_RS01850 8a7820fe44a4022d274d3c4ca7b36c57 948 Gene3D G3DSA:3.30.460.10 116 289 1.1E-61 T 09-03-2017 BV404_RS01850 8a7820fe44a4022d274d3c4ca7b36c57 948 SUPERFAMILY SSF81301 529 819 3.07E-88 T 09-03-2017 BV404_RS01850 8a7820fe44a4022d274d3c4ca7b36c57 948 SUPERFAMILY SSF81593 821 947 4.47E-32 T 09-03-2017 BV404_RS01850 8a7820fe44a4022d274d3c4ca7b36c57 948 SUPERFAMILY SSF81301 26 290 7.77E-89 T 09-03-2017 BV404_RS01850 8a7820fe44a4022d274d3c4ca7b36c57 948 SUPERFAMILY SSF81593 291 440 2.2E-45 T 09-03-2017 BV404_RS01850 8a7820fe44a4022d274d3c4ca7b36c57 948 Pfam PF08335 GlnD PII-uridylyltransferase 831 917 3.3E-7 T 09-03-2017 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 BV404_RS01850 8a7820fe44a4022d274d3c4ca7b36c57 948 Pfam PF08335 GlnD PII-uridylyltransferase 301 440 1.5E-45 T 09-03-2017 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 BV404_RS01850 8a7820fe44a4022d274d3c4ca7b36c57 948 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 34 280 1.9E-95 T 09-03-2017 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 BV404_RS01850 8a7820fe44a4022d274d3c4ca7b36c57 948 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 557 809 4.2E-99 T 09-03-2017 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 BV404_RS11065 2b237ec8f39b2d394f0474bb17b4dffa 703 Gene3D G3DSA:3.30.870.10 500 684 1.8E-70 T 09-03-2017 BV404_RS11065 2b237ec8f39b2d394f0474bb17b4dffa 703 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 677 7.1E-264 T 09-03-2017 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 BV404_RS11065 2b237ec8f39b2d394f0474bb17b4dffa 703 SUPERFAMILY SSF56024 315 492 7.22E-53 T 09-03-2017 BV404_RS11065 2b237ec8f39b2d394f0474bb17b4dffa 703 SUPERFAMILY SSF140356 4 104 5.75E-32 T 09-03-2017 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 BV404_RS11065 2b237ec8f39b2d394f0474bb17b4dffa 703 SUPERFAMILY SSF143724 107 312 1.2E-63 T 09-03-2017 BV404_RS11065 2b237ec8f39b2d394f0474bb17b4dffa 703 Gene3D G3DSA:3.30.1840.10 107 300 2.2E-55 T 09-03-2017 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 BV404_RS11065 2b237ec8f39b2d394f0474bb17b4dffa 703 PIRSF PIRSF015589 1 696 5.7E-252 T 09-03-2017 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 BV404_RS11065 2b237ec8f39b2d394f0474bb17b4dffa 703 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 681 32.202 T 09-03-2017 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 BV404_RS11065 2b237ec8f39b2d394f0474bb17b4dffa 703 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 1.5E-30 T 09-03-2017 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 BV404_RS11065 2b237ec8f39b2d394f0474bb17b4dffa 703 Pfam PF13090 Polyphosphate kinase C-terminal domain 331 676 4.5E-145 T 09-03-2017 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 BV404_RS11065 2b237ec8f39b2d394f0474bb17b4dffa 703 Gene3D G3DSA:3.30.870.10 315 499 1.8E-71 T 09-03-2017 BV404_RS11065 2b237ec8f39b2d394f0474bb17b4dffa 703 SUPERFAMILY SSF56024 500 684 1.05E-68 T 09-03-2017 BV404_RS11065 2b237ec8f39b2d394f0474bb17b4dffa 703 Pfam PF02503 Polyphosphate kinase middle domain 119 320 2.9E-46 T 09-03-2017 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 BV404_RS14275 1c34c1a892881c8280b00e89a254de9d 387 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 09-03-2017 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 BV404_RS14275 1c34c1a892881c8280b00e89a254de9d 387 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 1 387 60.31 T 09-03-2017 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 BV404_RS14275 1c34c1a892881c8280b00e89a254de9d 387 PIRSF PIRSF000429 1 387 5.5E-133 T 09-03-2017 IPR002155 Thiolase GO:0008152|GO:0016747 BV404_RS14275 1c34c1a892881c8280b00e89a254de9d 387 SUPERFAMILY SSF53901 263 386 1.98E-44 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 BV404_RS14275 1c34c1a892881c8280b00e89a254de9d 387 Gene3D G3DSA:3.40.47.10 4 126 6.6E-64 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 BV404_RS14275 1c34c1a892881c8280b00e89a254de9d 387 Gene3D G3DSA:3.40.47.10 184 267 6.6E-64 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 BV404_RS14275 1c34c1a892881c8280b00e89a254de9d 387 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 3 387 4.8E-237 T 09-03-2017 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 BV404_RS14275 1c34c1a892881c8280b00e89a254de9d 387 Pfam PF02803 Thiolase, C-terminal domain 262 386 1.5E-48 T 09-03-2017 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 BV404_RS14275 1c34c1a892881c8280b00e89a254de9d 387 Gene3D G3DSA:3.40.47.10 268 386 2.2E-60 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 BV404_RS14275 1c34c1a892881c8280b00e89a254de9d 387 Gene3D G3DSA:3.40.47.10 143 183 2.2E-60 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 BV404_RS14275 1c34c1a892881c8280b00e89a254de9d 387 ProSitePatterns PS00737 Thiolases signature 2. 333 349 - T 09-03-2017 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 BV404_RS14275 1c34c1a892881c8280b00e89a254de9d 387 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 385 5.5E-143 T 09-03-2017 IPR002155 Thiolase GO:0008152|GO:0016747 BV404_RS14275 1c34c1a892881c8280b00e89a254de9d 387 Pfam PF00108 Thiolase, N-terminal domain 4 253 1.1E-83 T 09-03-2017 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 BV404_RS14275 1c34c1a892881c8280b00e89a254de9d 387 ProSitePatterns PS00099 Thiolases active site. 368 381 - T 09-03-2017 IPR020610 Thiolase, active site GO:0008152|GO:0016747 BV404_RS14275 1c34c1a892881c8280b00e89a254de9d 387 SUPERFAMILY SSF53901 1 258 7.07E-80 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 BV404_RS01280 880cfa79a433abd72eab1bce71290077 187 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 9 183 9.1E-46 T 09-03-2017 IPR010664 Lipopolysaccharide assembly, LptC-related BV404_RS01280 880cfa79a433abd72eab1bce71290077 187 PIRSF PIRSF028513 2 185 4.6E-28 T 09-03-2017 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 BV404_RS01280 880cfa79a433abd72eab1bce71290077 187 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 3 185 23.753 T 09-03-2017 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 BV404_RS01280 880cfa79a433abd72eab1bce71290077 187 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 5 182 2.3E-46 T 09-03-2017 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 BV404_RS13725 0897b67c3bfd05bc137eb4318510f49a 724 TIGRFAM TIGR01075 uvrD: DNA helicase II 7 722 0.0 T 09-03-2017 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 BV404_RS13725 0897b67c3bfd05bc137eb4318510f49a 724 Gene3D G3DSA:3.40.50.300 287 388 1.3E-71 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS13725 0897b67c3bfd05bc137eb4318510f49a 724 Gene3D G3DSA:3.40.50.300 553 643 1.3E-71 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS13725 0897b67c3bfd05bc137eb4318510f49a 724 SUPERFAMILY SSF52540 8 643 4.23E-178 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS13725 0897b67c3bfd05bc137eb4318510f49a 724 Gene3D G3DSA:1.10.486.10 389 542 1.4E-50 T 09-03-2017 BV404_RS13725 0897b67c3bfd05bc137eb4318510f49a 724 Pfam PF13361 UvrD-like helicase C-terminal domain 278 617 1.2E-77 T 09-03-2017 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 BV404_RS13725 0897b67c3bfd05bc137eb4318510f49a 724 Pfam PF00580 UvrD/REP helicase N-terminal domain 11 272 2.5E-75 T 09-03-2017 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 BV404_RS13725 0897b67c3bfd05bc137eb4318510f49a 724 Gene3D G3DSA:1.10.10.160 115 191 5.0E-23 T 09-03-2017 IPR013986 DExx box DNA helicase domain BV404_RS13725 0897b67c3bfd05bc137eb4318510f49a 724 Gene3D G3DSA:3.40.50.300 8 111 1.5E-70 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS13725 0897b67c3bfd05bc137eb4318510f49a 724 Gene3D G3DSA:3.40.50.300 192 286 1.5E-70 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS12885 386fad11a221f41ed345fe53eb43acd8 118 SUPERFAMILY SSF75169 1 118 1.14E-32 T 09-03-2017 IPR027396 DsrEFH-like BV404_RS12885 386fad11a221f41ed345fe53eb43acd8 118 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 3 118 1.4E-44 T 09-03-2017 IPR017462 Sulphur relay, TusC/DsrF BV404_RS12885 386fad11a221f41ed345fe53eb43acd8 118 Gene3D G3DSA:3.40.1260.10 2 118 1.7E-42 T 09-03-2017 IPR027396 DsrEFH-like BV404_RS12885 386fad11a221f41ed345fe53eb43acd8 118 Pfam PF02635 DsrE/DsrF-like family 2 118 7.9E-22 T 09-03-2017 IPR003787 Sulphur relay, DsrE/F-like protein BV404_RS06435 5f1803689b1f0fd3911c0f36969deb6c 358 PIRSF PIRSF028101 1 358 1.5E-153 T 09-03-2017 IPR008311 Uncharacterised conserved protein UCP028101 BV404_RS06435 5f1803689b1f0fd3911c0f36969deb6c 358 Pfam PF07433 Protein of unknown function (DUF1513) 64 356 6.6E-107 T 09-03-2017 IPR008311 Uncharacterised conserved protein UCP028101 BV404_RS06435 5f1803689b1f0fd3911c0f36969deb6c 358 SUPERFAMILY SSF50969 57 180 7.14E-13 T 09-03-2017 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like BV404_RS06435 5f1803689b1f0fd3911c0f36969deb6c 358 SUPERFAMILY SSF50969 244 351 7.14E-13 T 09-03-2017 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like BV404_RS06435 5f1803689b1f0fd3911c0f36969deb6c 358 Gene3D G3DSA:2.130.10.10 244 307 8.9E-8 T 09-03-2017 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 BV404_RS06435 5f1803689b1f0fd3911c0f36969deb6c 358 Gene3D G3DSA:2.130.10.10 55 180 8.9E-8 T 09-03-2017 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 BV404_RS04075 9f2094cee65bdd6d7091fde32cabe12b 225 TIGRFAM TIGR02798 ligK_PcmE: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase 5 225 9.7E-112 T 09-03-2017 IPR014165 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase KEGG: 00362+4.1.3.17|KEGG: 00660+4.1.3.17|MetaCyc: PWY-7701 BV404_RS04075 9f2094cee65bdd6d7091fde32cabe12b 225 Pfam PF03737 Demethylmenaquinone methyltransferase 29 174 1.0E-37 T 09-03-2017 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein BV404_RS04075 9f2094cee65bdd6d7091fde32cabe12b 225 Gene3D G3DSA:3.50.30.40 23 181 4.0E-45 T 09-03-2017 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein BV404_RS04075 9f2094cee65bdd6d7091fde32cabe12b 225 SUPERFAMILY SSF89562 23 185 9.81E-47 T 09-03-2017 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein BV404_RS14290 c8f98e3e927c9655adcd385768859b84 485 PIRSF PIRSF006247 1 485 4.9E-177 T 09-03-2017 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 BV404_RS14290 c8f98e3e927c9655adcd385768859b84 485 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 468 6.6E-120 T 09-03-2017 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 BV404_RS14290 c8f98e3e927c9655adcd385768859b84 485 Pfam PF02386 Cation transport protein 39 477 2.5E-89 T 09-03-2017 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 BV404_RS09910 2363d8af3f680e449122fa3873e0abd7 554 Pfam PF13537 Glutamine amidotransferase domain 48 166 1.0E-39 T 09-03-2017 IPR017932 Glutamine amidotransferase type 2 domain BV404_RS09910 2363d8af3f680e449122fa3873e0abd7 554 Gene3D G3DSA:3.60.20.10 2 189 1.2E-66 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal BV404_RS09910 2363d8af3f680e449122fa3873e0abd7 554 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 373 7.7E-116 T 09-03-2017 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 BV404_RS09910 2363d8af3f680e449122fa3873e0abd7 554 SUPERFAMILY SSF52402 210 479 9.69E-74 T 09-03-2017 BV404_RS09910 2363d8af3f680e449122fa3873e0abd7 554 Gene3D G3DSA:3.40.50.620 191 510 1.6E-115 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS09910 2363d8af3f680e449122fa3873e0abd7 554 SUPERFAMILY SSF56235 1 196 7.29E-57 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal BV404_RS09910 2363d8af3f680e449122fa3873e0abd7 554 Pfam PF00733 Asparagine synthase 212 511 1.5E-95 T 09-03-2017 IPR001962 Asparagine synthase GO:0004066|GO:0006529 BV404_RS09575 5a7da6616ee27eff65b9093aa212cbe0 708 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 315 494 6.4E-54 T 09-03-2017 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 BV404_RS09575 5a7da6616ee27eff65b9093aa212cbe0 708 Gene3D G3DSA:1.10.1040.10 498 590 2.1E-26 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BV404_RS09575 5a7da6616ee27eff65b9093aa212cbe0 708 Gene3D G3DSA:3.40.50.720 308 497 4.0E-52 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS09575 5a7da6616ee27eff65b9093aa212cbe0 708 SUPERFAMILY SSF51735 311 494 6.49E-48 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS09575 5a7da6616ee27eff65b9093aa212cbe0 708 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 619 692 2.3E-5 T 09-03-2017 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 BV404_RS09575 5a7da6616ee27eff65b9093aa212cbe0 708 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 496 589 3.7E-25 T 09-03-2017 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 BV404_RS09575 5a7da6616ee27eff65b9093aa212cbe0 708 Gene3D G3DSA:1.10.1040.10 624 696 8.2E-22 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BV404_RS09575 5a7da6616ee27eff65b9093aa212cbe0 708 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 09-03-2017 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 BV404_RS09575 5a7da6616ee27eff65b9093aa212cbe0 708 Gene3D G3DSA:3.90.226.10 235 294 3.4E-62 T 09-03-2017 IPR029045 ClpP/crotonase-like domain BV404_RS09575 5a7da6616ee27eff65b9093aa212cbe0 708 Gene3D G3DSA:3.90.226.10 2 203 3.4E-62 T 09-03-2017 IPR029045 ClpP/crotonase-like domain BV404_RS09575 5a7da6616ee27eff65b9093aa212cbe0 708 SUPERFAMILY SSF48179 613 706 5.02E-26 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 BV404_RS09575 5a7da6616ee27eff65b9093aa212cbe0 708 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 6 706 0.0 T 09-03-2017 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 BV404_RS09575 5a7da6616ee27eff65b9093aa212cbe0 708 SUPERFAMILY SSF52096 3 304 6.13E-66 T 09-03-2017 IPR029045 ClpP/crotonase-like domain BV404_RS09575 5a7da6616ee27eff65b9093aa212cbe0 708 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 224 3.2E-38 T 09-03-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 BV404_RS09575 5a7da6616ee27eff65b9093aa212cbe0 708 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 493 518 - T 09-03-2017 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 BV404_RS09575 5a7da6616ee27eff65b9093aa212cbe0 708 SUPERFAMILY SSF48179 496 604 8.5E-29 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 BV404_RS09575 5a7da6616ee27eff65b9093aa212cbe0 708 Hamap MF_01617 Fatty acid oxidation complex subunit alpha [fadJ]. 1 706 53.139 T 09-03-2017 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 BV404_RS05600 7b06c4dbb6b2440c3d981eb32012a9df 414 PIRSF PIRSF003085 13 414 3.8E-122 T 09-03-2017 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 BV404_RS05600 7b06c4dbb6b2440c3d981eb32012a9df 414 SUPERFAMILY SSF53335 58 365 1.84E-84 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS05600 7b06c4dbb6b2440c3d981eb32012a9df 414 Gene3D G3DSA:3.40.50.150 135 411 6.3E-96 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS05600 7b06c4dbb6b2440c3d981eb32012a9df 414 Pfam PF02353 Mycolic acid cyclopropane synthetase 139 406 3.8E-79 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS00745 91ea9e455baf4ff4894b1df2da5d59f1 298 SUPERFAMILY SSF53850 89 293 3.75E-37 T 09-03-2017 BV404_RS00745 91ea9e455baf4ff4894b1df2da5d59f1 298 Gene3D G3DSA:3.40.190.10 90 175 3.0E-18 T 09-03-2017 BV404_RS00745 91ea9e455baf4ff4894b1df2da5d59f1 298 Gene3D G3DSA:1.10.10.10 1 83 3.5E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS00745 91ea9e455baf4ff4894b1df2da5d59f1 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.8E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS00745 91ea9e455baf4ff4894b1df2da5d59f1 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.8E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS00745 91ea9e455baf4ff4894b1df2da5d59f1 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.8E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS00745 91ea9e455baf4ff4894b1df2da5d59f1 298 Gene3D G3DSA:3.40.190.10 176 267 5.8E-30 T 09-03-2017 BV404_RS00745 91ea9e455baf4ff4894b1df2da5d59f1 298 Pfam PF03466 LysR substrate binding domain 89 291 3.2E-42 T 09-03-2017 IPR005119 LysR, substrate-binding BV404_RS00745 91ea9e455baf4ff4894b1df2da5d59f1 298 SUPERFAMILY SSF46785 1 86 2.38E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS00745 91ea9e455baf4ff4894b1df2da5d59f1 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 5.0E-20 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS05155 d0f53e29b6b90948514b9f37b4cc2e63 974 ProSitePatterns PS00012 Phosphopantetheine attachment site. 469 484 - T 09-03-2017 IPR006162 Phosphopantetheine attachment site BV404_RS05155 d0f53e29b6b90948514b9f37b4cc2e63 974 Pfam PF13745 HxxPF-repeated domain 851 945 1.2E-6 T 09-03-2017 BV404_RS05155 d0f53e29b6b90948514b9f37b4cc2e63 974 Pfam PF00550 Phosphopantetheine attachment site 442 509 1.4E-9 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain BV404_RS05155 d0f53e29b6b90948514b9f37b4cc2e63 974 Pfam PF00668 Condensation domain 529 820 9.7E-42 T 09-03-2017 IPR001242 Condensation domain BV404_RS05155 d0f53e29b6b90948514b9f37b4cc2e63 974 Pfam PF00668 Condensation domain 27 250 4.4E-7 T 09-03-2017 IPR001242 Condensation domain BV404_RS05155 d0f53e29b6b90948514b9f37b4cc2e63 974 SUPERFAMILY SSF52777 715 960 5.34E-36 T 09-03-2017 BV404_RS05155 d0f53e29b6b90948514b9f37b4cc2e63 974 Gene3D G3DSA:1.10.1200.10 438 513 2.8E-16 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain BV404_RS05155 d0f53e29b6b90948514b9f37b4cc2e63 974 SUPERFAMILY SSF47336 441 509 1.03E-12 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain BV404_RS05155 d0f53e29b6b90948514b9f37b4cc2e63 974 SUPERFAMILY SSF52777 534 710 1.85E-35 T 09-03-2017 BV404_RS05155 d0f53e29b6b90948514b9f37b4cc2e63 974 SMART SM00823 Phosphopantetheine attachment site 445 514 0.0059 T 09-03-2017 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BV404_RS05155 d0f53e29b6b90948514b9f37b4cc2e63 974 SUPERFAMILY SSF52777 22 170 1.22E-9 T 09-03-2017 BV404_RS01230 82cca7aa5a4b183cc40511cf99e86e82 175 Gene3D G3DSA:1.10.60.30 31 102 6.4E-33 T 09-03-2017 IPR023153 PSPTO4464-like domain BV404_RS01230 82cca7aa5a4b183cc40511cf99e86e82 175 Pfam PF04751 Protein of unknown function (DUF615) 18 168 9.8E-55 T 09-03-2017 IPR006839 Ribosome-associated, YjgA BV404_RS01230 82cca7aa5a4b183cc40511cf99e86e82 175 SUPERFAMILY SSF158710 30 170 1.09E-51 T 09-03-2017 BV404_RS01230 82cca7aa5a4b183cc40511cf99e86e82 175 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 8 172 23.308 T 09-03-2017 IPR006839 Ribosome-associated, YjgA BV404_RS01230 82cca7aa5a4b183cc40511cf99e86e82 175 PIRSF PIRSF016183 1 174 7.1E-71 T 09-03-2017 IPR006839 Ribosome-associated, YjgA BV404_RS01230 82cca7aa5a4b183cc40511cf99e86e82 175 Gene3D G3DSA:1.10.60.30 104 172 1.8E-28 T 09-03-2017 IPR023153 PSPTO4464-like domain BV404_RS14840 deb59f74d8c02ba19ae1687ec06fd5e9 807 Pfam PF01553 Acyltransferase 289 424 2.3E-23 T 09-03-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 BV404_RS14840 deb59f74d8c02ba19ae1687ec06fd5e9 807 PIRSF PIRSF000437 19 807 0.0 T 09-03-2017 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 BV404_RS14840 deb59f74d8c02ba19ae1687ec06fd5e9 807 SUPERFAMILY SSF69593 283 491 3.66E-25 T 09-03-2017 BV404_RS14840 deb59f74d8c02ba19ae1687ec06fd5e9 807 PIRSF PIRSF500064 2 807 0.0 T 09-03-2017 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 BV404_RS14840 deb59f74d8c02ba19ae1687ec06fd5e9 807 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 807 31.865 T 09-03-2017 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 BV404_RS14840 deb59f74d8c02ba19ae1687ec06fd5e9 807 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 799 0.0 T 09-03-2017 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 BV404_RS14840 deb59f74d8c02ba19ae1687ec06fd5e9 807 SMART SM00563 300 427 3.6E-26 T 09-03-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 BV404_RS10710 a208c0242315b29a0301aea3442e71d7 138 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 3.3E-5 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site BV404_RS10710 a208c0242315b29a0301aea3442e71d7 138 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site BV404_RS10710 a208c0242315b29a0301aea3442e71d7 138 Pfam PF13633 Prokaryotic N-terminal methylation site 5 31 1.7E-9 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site BV404_RS09295 c260454ab89032ff96c653f12c220685 310 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 266 292 - T 09-03-2017 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981 BV404_RS09295 c260454ab89032ff96c653f12c220685 310 Pfam PF01148 Cytidylyltransferase family 42 307 4.7E-69 T 09-03-2017 BV404_RS13735 20e10560ab2e9c1a69a20c1ef905688d 287 Pfam PF05114 Protein of unknown function (DUF692) 9 273 1.1E-105 T 09-03-2017 IPR007801 Uncharacterised protein family UPF0276 BV404_RS13735 20e10560ab2e9c1a69a20c1ef905688d 287 SUPERFAMILY SSF51658 29 257 1.29E-10 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain BV404_RS13735 20e10560ab2e9c1a69a20c1ef905688d 287 Hamap MF_00697 UPF0276 protein . 10 282 44.353 T 09-03-2017 IPR007801 Uncharacterised protein family UPF0276 BV404_RS13735 20e10560ab2e9c1a69a20c1ef905688d 287 Gene3D G3DSA:3.20.20.150 8 278 4.3E-100 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain BV404_RS04470 eba8afccb76cfed7292045326d8c469b 623 Gene3D G3DSA:1.20.1250.20 19 204 4.2E-7 T 09-03-2017 BV404_RS04470 eba8afccb76cfed7292045326d8c469b 623 SMART SM00563 455 569 4.6E-37 T 09-03-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 BV404_RS04470 eba8afccb76cfed7292045326d8c469b 623 Pfam PF07690 Major Facilitator Superfamily 18 311 9.6E-11 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BV404_RS04470 eba8afccb76cfed7292045326d8c469b 623 SUPERFAMILY SSF69593 380 569 2.88E-29 T 09-03-2017 BV404_RS04470 eba8afccb76cfed7292045326d8c469b 623 Gene3D G3DSA:1.20.1250.20 226 419 8.7E-9 T 09-03-2017 BV404_RS04470 eba8afccb76cfed7292045326d8c469b 623 SUPERFAMILY SSF103473 10 422 3.01E-27 T 09-03-2017 IPR020846 Major facilitator superfamily domain BV404_RS04470 eba8afccb76cfed7292045326d8c469b 623 Gene3D G3DSA:3.40.1130.10 444 567 5.0E-16 T 09-03-2017 BV404_RS04470 eba8afccb76cfed7292045326d8c469b 623 Pfam PF01553 Acyltransferase 440 567 1.1E-24 T 09-03-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 BV404_RS07350 f39d2d34fbb04027718c0ce82b0bddaa 276 SUPERFAMILY SSF109604 7 233 4.11E-56 T 09-03-2017 BV404_RS07350 f39d2d34fbb04027718c0ce82b0bddaa 276 Gene3D G3DSA:1.10.3150.10 6 233 9.0E-63 T 09-03-2017 IPR013976 Metal-dependent hydrolase HDOD BV404_RS07350 f39d2d34fbb04027718c0ce82b0bddaa 276 Pfam PF08668 HDOD domain 13 204 2.5E-52 T 09-03-2017 IPR013976 Metal-dependent hydrolase HDOD BV404_RS10890 19d39d8eb2a7e00aeec169c4047f20c6 385 Gene3D G3DSA:2.140.10.10 5 378 8.0E-76 T 09-03-2017 IPR027295 Quinoprotein alcohol dehydrogenase-like domain BV404_RS10890 19d39d8eb2a7e00aeec169c4047f20c6 385 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 8 382 4.1E-140 T 09-03-2017 IPR017687 Outer membrane protein assembly factor BamB BV404_RS10890 19d39d8eb2a7e00aeec169c4047f20c6 385 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 3 384 41.505 T 09-03-2017 IPR017687 Outer membrane protein assembly factor BamB BV404_RS10890 19d39d8eb2a7e00aeec169c4047f20c6 385 Pfam PF13360 PQQ-like domain 76 310 1.5E-55 T 09-03-2017 IPR002372 Pyrrolo-quinoline quinone repeat BV404_RS10890 19d39d8eb2a7e00aeec169c4047f20c6 385 SMART SM00564 321 353 0.012 T 09-03-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BV404_RS10890 19d39d8eb2a7e00aeec169c4047f20c6 385 SMART SM00564 147 178 0.72 T 09-03-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BV404_RS10890 19d39d8eb2a7e00aeec169c4047f20c6 385 SMART SM00564 192 223 110.0 T 09-03-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BV404_RS10890 19d39d8eb2a7e00aeec169c4047f20c6 385 SMART SM00564 63 94 6.4E-5 T 09-03-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BV404_RS10890 19d39d8eb2a7e00aeec169c4047f20c6 385 SMART SM00564 243 274 130.0 T 09-03-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BV404_RS10890 19d39d8eb2a7e00aeec169c4047f20c6 385 SMART SM00564 281 312 7.7 T 09-03-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BV404_RS10890 19d39d8eb2a7e00aeec169c4047f20c6 385 SMART SM00564 106 138 6.8E-4 T 09-03-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BV404_RS10890 19d39d8eb2a7e00aeec169c4047f20c6 385 SUPERFAMILY SSF50998 41 374 6.44E-83 T 09-03-2017 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily BV404_RS04235 aa331ac1838440c46a4c996cdaa0b77e 56 SUPERFAMILY SSF57829 2 55 2.87E-18 T 09-03-2017 IPR011332 Zinc-binding ribosomal protein GO:0006412 BV404_RS04235 aa331ac1838440c46a4c996cdaa0b77e 56 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 6.5E-20 T 09-03-2017 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS04235 aa331ac1838440c46a4c996cdaa0b77e 56 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.057 T 09-03-2017 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS04235 aa331ac1838440c46a4c996cdaa0b77e 56 Pfam PF01783 Ribosomal L32p protein family 2 56 9.9E-20 T 09-03-2017 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS09885 d8165fa3dfb193c45db5aafad54a571d 556 Gene3D G3DSA:2.40.240.10 462 548 6.7E-32 T 09-03-2017 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BV404_RS09885 d8165fa3dfb193c45db5aafad54a571d 556 SUPERFAMILY SSF52374 11 337 1.38E-102 T 09-03-2017 BV404_RS09885 d8165fa3dfb193c45db5aafad54a571d 556 Gene3D G3DSA:3.40.50.620 28 96 1.6E-43 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS09885 d8165fa3dfb193c45db5aafad54a571d 556 Gene3D G3DSA:3.40.50.620 212 262 1.6E-43 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS09885 d8165fa3dfb193c45db5aafad54a571d 556 Gene3D G3DSA:2.40.240.10 348 461 1.7E-49 T 09-03-2017 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BV404_RS09885 d8165fa3dfb193c45db5aafad54a571d 556 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 8.9E-125 T 09-03-2017 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 BV404_RS09885 d8165fa3dfb193c45db5aafad54a571d 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 6.0E-10 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 BV404_RS09885 d8165fa3dfb193c45db5aafad54a571d 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 6.0E-10 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 BV404_RS09885 d8165fa3dfb193c45db5aafad54a571d 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 6.0E-10 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 BV404_RS09885 d8165fa3dfb193c45db5aafad54a571d 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 6.0E-10 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 BV404_RS09885 d8165fa3dfb193c45db5aafad54a571d 556 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 552 1.8E-295 T 09-03-2017 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BV404_RS09885 d8165fa3dfb193c45db5aafad54a571d 556 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 550 54.217 T 09-03-2017 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 BV404_RS09885 d8165fa3dfb193c45db5aafad54a571d 556 Gene3D G3DSA:3.90.800.10 101 209 7.4E-47 T 09-03-2017 BV404_RS09885 d8165fa3dfb193c45db5aafad54a571d 556 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 09-03-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BV404_RS09885 d8165fa3dfb193c45db5aafad54a571d 556 SUPERFAMILY SSF50715 340 548 4.08E-78 T 09-03-2017 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BV404_RS09885 d8165fa3dfb193c45db5aafad54a571d 556 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 529 2.0E-61 T 09-03-2017 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BV404_RS09885 d8165fa3dfb193c45db5aafad54a571d 556 Gene3D G3DSA:1.10.1160.10 263 338 1.1E-38 T 09-03-2017 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 BV404_RS14350 4ce4a86c8189fa4a4c83971fabbb5b93 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 9 119 8.1E-24 T 09-03-2017 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 BV404_RS14350 4ce4a86c8189fa4a4c83971fabbb5b93 127 TIGRFAM TIGR00494 crcB: protein CrcB 9 121 8.0E-30 T 09-03-2017 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 BV404_RS14350 4ce4a86c8189fa4a4c83971fabbb5b93 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 7 125 19.147 T 09-03-2017 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 BV404_RS11060 f3631a02fa0bfa7446fc774b8da21015 733 SUPERFAMILY SSF69322 59 388 2.62E-9 T 09-03-2017 BV404_RS11060 f3631a02fa0bfa7446fc774b8da21015 733 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 451 727 8.3E-12 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS11060 f3631a02fa0bfa7446fc774b8da21015 733 Gene3D G3DSA:1.10.3720.10 415 497 1.7E-49 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS11060 f3631a02fa0bfa7446fc774b8da21015 733 Gene3D G3DSA:1.10.3720.10 571 731 1.7E-49 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS11060 f3631a02fa0bfa7446fc774b8da21015 733 Gene3D G3DSA:1.10.3720.10 33 54 1.7E-49 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS11060 f3631a02fa0bfa7446fc774b8da21015 733 Gene3D G3DSA:2.130.10.10 335 391 7.1E-6 T 09-03-2017 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 BV404_RS11060 f3631a02fa0bfa7446fc774b8da21015 733 Gene3D G3DSA:2.130.10.10 72 243 7.1E-6 T 09-03-2017 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 BV404_RS11060 f3631a02fa0bfa7446fc774b8da21015 733 SUPERFAMILY SSF161098 579 670 3.2E-19 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS11060 f3631a02fa0bfa7446fc774b8da21015 733 SUPERFAMILY SSF161098 429 496 3.2E-19 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS19350 5761f7a48303ee0192ecdd5cb36aa745 145 SUPERFAMILY SSF64518 1 141 1.44E-31 T 09-03-2017 BV404_RS19350 5761f7a48303ee0192ecdd5cb36aa745 145 Pfam PF00669 Bacterial flagellin N-terminal helical region 1 101 7.6E-24 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BV404_RS19350 5761f7a48303ee0192ecdd5cb36aa745 145 Gene3D G3DSA:1.20.1330.10 13 126 2.3E-31 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BV404_RS19350 5761f7a48303ee0192ecdd5cb36aa745 145 PRINTS PR00207 Flagellin signature 35 54 5.1E-8 T 09-03-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BV404_RS19350 5761f7a48303ee0192ecdd5cb36aa745 145 PRINTS PR00207 Flagellin signature 70 93 5.1E-8 T 09-03-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BV404_RS12680 c21cd3d81fccddd94beb10f22b1b6e42 449 ProSitePatterns PS00324 Aspartokinase signature. 6 14 - T 09-03-2017 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 BV404_RS12680 c21cd3d81fccddd94beb10f22b1b6e42 449 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 6 448 1.4E-121 T 09-03-2017 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 BV404_RS12680 c21cd3d81fccddd94beb10f22b1b6e42 449 Gene3D G3DSA:3.40.1160.10 6 53 2.9E-63 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase BV404_RS12680 c21cd3d81fccddd94beb10f22b1b6e42 449 Gene3D G3DSA:3.40.1160.10 107 295 2.9E-63 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase BV404_RS12680 c21cd3d81fccddd94beb10f22b1b6e42 449 SUPERFAMILY SSF53633 6 293 1.96E-78 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase BV404_RS12680 c21cd3d81fccddd94beb10f22b1b6e42 449 PIRSF PIRSF000726 2 449 2.0E-126 T 09-03-2017 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 BV404_RS12680 c21cd3d81fccddd94beb10f22b1b6e42 449 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 6 448 5.2E-123 T 09-03-2017 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 BV404_RS12680 c21cd3d81fccddd94beb10f22b1b6e42 449 SUPERFAMILY SSF55021 297 394 1.6E-19 T 09-03-2017 BV404_RS12680 c21cd3d81fccddd94beb10f22b1b6e42 449 Pfam PF00696 Amino acid kinase family 6 278 5.8E-49 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase BV404_RS12680 c21cd3d81fccddd94beb10f22b1b6e42 449 SUPERFAMILY SSF55021 378 447 1.2E-11 T 09-03-2017 BV404_RS05545 4de7b6b1cd0371cfef83480b7fcd83d7 113 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 2 106 1.3E-30 T 09-03-2017 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 BV404_RS05545 4de7b6b1cd0371cfef83480b7fcd83d7 113 SUPERFAMILY SSF50022 3 109 8.23E-32 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 BV404_RS05545 4de7b6b1cd0371cfef83480b7fcd83d7 113 Pfam PF13806 Rieske-like [2Fe-2S] domain 3 105 3.6E-32 T 09-03-2017 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 BV404_RS05545 4de7b6b1cd0371cfef83480b7fcd83d7 113 Gene3D G3DSA:2.102.10.10 3 109 3.7E-37 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 BV404_RS14260 085f88bb95b00958a5bb3fb708054cca 257 Gene3D G3DSA:3.40.190.10 126 206 1.5E-6 T 09-03-2017 BV404_RS14260 085f88bb95b00958a5bb3fb708054cca 257 SUPERFAMILY SSF53850 1 255 2.85E-50 T 09-03-2017 BV404_RS14260 085f88bb95b00958a5bb3fb708054cca 257 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 33 253 6.7E-37 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BV404_RS14260 085f88bb95b00958a5bb3fb708054cca 257 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 56 69 - T 09-03-2017 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 BV404_RS14260 085f88bb95b00958a5bb3fb708054cca 257 Gene3D G3DSA:3.40.190.10 30 118 5.4E-28 T 09-03-2017 BV404_RS14260 085f88bb95b00958a5bb3fb708054cca 257 Gene3D G3DSA:3.40.190.10 215 254 5.4E-28 T 09-03-2017 BV404_RS14260 085f88bb95b00958a5bb3fb708054cca 257 SMART SM00062 32 256 2.5E-38 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BV404_RS11620 1bc29eacc0c07ffd9752e4b7efec990f 132 TIGRFAM TIGR00586 mutt: mutator mutT protein 1 127 1.1E-41 T 09-03-2017 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 BV404_RS11620 1bc29eacc0c07ffd9752e4b7efec990f 132 SUPERFAMILY SSF55811 1 128 3.79E-34 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 BV404_RS11620 1bc29eacc0c07ffd9752e4b7efec990f 132 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 09-03-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 BV404_RS11620 1bc29eacc0c07ffd9752e4b7efec990f 132 Pfam PF00293 NUDIX domain 5 125 3.4E-19 T 09-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 BV404_RS11620 1bc29eacc0c07ffd9752e4b7efec990f 132 Gene3D G3DSA:3.90.79.10 1 128 6.5E-31 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 BV404_RS11620 1bc29eacc0c07ffd9752e4b7efec990f 132 PRINTS PR00502 NUDIX hydrolase family signature 48 63 2.1E-9 T 09-03-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 BV404_RS11620 1bc29eacc0c07ffd9752e4b7efec990f 132 PRINTS PR00502 NUDIX hydrolase family signature 34 48 2.1E-9 T 09-03-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 BV404_RS00125 776638135834b176b93f96a8fb8f9182 852 SUPERFAMILY SSF158472 369 418 1.83E-5 T 09-03-2017 BV404_RS00125 776638135834b176b93f96a8fb8f9182 852 SMART SM00304 368 421 1.1E-4 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 BV404_RS00125 776638135834b176b93f96a8fb8f9182 852 Pfam PF00990 Diguanylate cyclase, GGDEF domain 428 573 1.3E-28 T 09-03-2017 IPR000160 GGDEF domain BV404_RS00125 776638135834b176b93f96a8fb8f9182 852 Pfam PF00672 HAMP domain 349 417 1.4E-7 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 BV404_RS00125 776638135834b176b93f96a8fb8f9182 852 Pfam PF02743 Cache domain 57 328 5.7E-15 T 09-03-2017 IPR033479 Double Cache domain 1 BV404_RS00125 776638135834b176b93f96a8fb8f9182 852 Gene3D G3DSA:3.30.70.270 429 585 2.7E-30 T 09-03-2017 BV404_RS00125 776638135834b176b93f96a8fb8f9182 852 SMART SM00052 590 838 3.9E-102 T 09-03-2017 IPR001633 EAL domain BV404_RS00125 776638135834b176b93f96a8fb8f9182 852 SUPERFAMILY SSF141868 597 845 2.09E-82 T 09-03-2017 IPR001633 EAL domain BV404_RS00125 776638135834b176b93f96a8fb8f9182 852 Gene3D G3DSA:3.20.20.450 593 840 1.6E-89 T 09-03-2017 IPR001633 EAL domain BV404_RS00125 776638135834b176b93f96a8fb8f9182 852 Pfam PF00563 EAL domain 597 833 1.3E-69 T 09-03-2017 IPR001633 EAL domain BV404_RS00125 776638135834b176b93f96a8fb8f9182 852 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 425 574 6.2E-20 T 09-03-2017 IPR000160 GGDEF domain BV404_RS00125 776638135834b176b93f96a8fb8f9182 852 Gene3D G3DSA:3.30.450.20 83 218 1.1E-13 T 09-03-2017 BV404_RS00125 776638135834b176b93f96a8fb8f9182 852 SMART SM00267 416 580 3.8E-34 T 09-03-2017 IPR000160 GGDEF domain BV404_RS00125 776638135834b176b93f96a8fb8f9182 852 SUPERFAMILY SSF55073 432 574 2.59E-29 T 09-03-2017 IPR029787 Nucleotide cyclase BV404_RS12685 1eb1f94e6a9fb55e916d2d8640562da5 1226 SUPERFAMILY SSF56507 903 1225 1.31E-128 T 09-03-2017 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BV404_RS12685 1eb1f94e6a9fb55e916d2d8640562da5 1226 Gene3D G3DSA:3.20.20.20 365 637 1.2E-114 T 09-03-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BV404_RS12685 1eb1f94e6a9fb55e916d2d8640562da5 1226 Gene3D G3DSA:3.10.196.10 959 1225 5.5E-108 T 09-03-2017 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BV404_RS12685 1eb1f94e6a9fb55e916d2d8640562da5 1226 Gene3D G3DSA:3.40.50.280 746 896 2.1E-65 T 09-03-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 BV404_RS12685 1eb1f94e6a9fb55e916d2d8640562da5 1226 Gene3D G3DSA:3.20.20.330 4 364 2.5E-127 T 09-03-2017 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 BV404_RS12685 1eb1f94e6a9fb55e916d2d8640562da5 1226 Pfam PF02574 Homocysteine S-methyltransferase 18 326 7.4E-93 T 09-03-2017 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 BV404_RS12685 1eb1f94e6a9fb55e916d2d8640562da5 1226 SUPERFAMILY SSF52242 744 895 3.66E-45 T 09-03-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 BV404_RS12685 1eb1f94e6a9fb55e916d2d8640562da5 1226 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 940 1210 1.9E-123 T 09-03-2017 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BV404_RS12685 1eb1f94e6a9fb55e916d2d8640562da5 1226 Pfam PF02607 B12 binding domain 660 734 2.9E-25 T 09-03-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BV404_RS12685 1eb1f94e6a9fb55e916d2d8640562da5 1226 PIRSF PIRSF000381 3 1197 0.0 T 09-03-2017 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BV404_RS12685 1eb1f94e6a9fb55e916d2d8640562da5 1226 SUPERFAMILY SSF51717 357 631 4.45E-88 T 09-03-2017 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BV404_RS12685 1eb1f94e6a9fb55e916d2d8640562da5 1226 SUPERFAMILY SSF82282 7 400 2.75E-119 T 09-03-2017 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 BV404_RS12685 1eb1f94e6a9fb55e916d2d8640562da5 1226 SMART SM01018 658 741 1.7E-45 T 09-03-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BV404_RS12685 1eb1f94e6a9fb55e916d2d8640562da5 1226 Gene3D G3DSA:1.10.1240.10 653 737 1.8E-39 T 09-03-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BV404_RS12685 1eb1f94e6a9fb55e916d2d8640562da5 1226 Pfam PF02310 B12 binding domain 749 842 2.4E-18 T 09-03-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 BV404_RS12685 1eb1f94e6a9fb55e916d2d8640562da5 1226 TIGRFAM TIGR02082 metH: methionine synthase 13 1194 0.0 T 09-03-2017 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BV404_RS12685 1eb1f94e6a9fb55e916d2d8640562da5 1226 SUPERFAMILY SSF47644 654 740 1.83E-29 T 09-03-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BV404_RS12685 1eb1f94e6a9fb55e916d2d8640562da5 1226 Pfam PF00809 Pterin binding enzyme 361 599 8.2E-60 T 09-03-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BV404_RS03000 127e97f19515b1fc0907f943e890af09 520 SUPERFAMILY SSF53955 105 261 3.52E-41 T 09-03-2017 IPR023346 Lysozyme-like domain BV404_RS03000 127e97f19515b1fc0907f943e890af09 520 Pfam PF01464 Transglycosylase SLT domain 119 220 3.0E-21 T 09-03-2017 IPR008258 Transglycosylase SLT domain 1 BV404_RS03000 127e97f19515b1fc0907f943e890af09 520 Gene3D G3DSA:1.10.530.10 102 265 1.1E-45 T 09-03-2017 BV404_RS03000 127e97f19515b1fc0907f943e890af09 520 SUPERFAMILY SSF54106 410 455 1.23E-11 T 09-03-2017 IPR018392 LysM domain BV404_RS03000 127e97f19515b1fc0907f943e890af09 520 SUPERFAMILY SSF54106 336 380 1.44E-10 T 09-03-2017 IPR018392 LysM domain BV404_RS03000 127e97f19515b1fc0907f943e890af09 520 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 127 155 - T 09-03-2017 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 BV404_RS03000 127e97f19515b1fc0907f943e890af09 520 SMART SM00257 337 380 2.4E-10 T 09-03-2017 IPR018392 LysM domain BV404_RS03000 127e97f19515b1fc0907f943e890af09 520 SMART SM00257 411 455 1.2E-14 T 09-03-2017 IPR018392 LysM domain BV404_RS03000 127e97f19515b1fc0907f943e890af09 520 SMART SM00257 468 512 3.9E-9 T 09-03-2017 IPR018392 LysM domain BV404_RS03000 127e97f19515b1fc0907f943e890af09 520 Gene3D G3DSA:3.10.350.10 466 512 1.3E-15 T 09-03-2017 IPR018392 LysM domain BV404_RS03000 127e97f19515b1fc0907f943e890af09 520 Gene3D G3DSA:3.10.350.10 336 381 7.8E-15 T 09-03-2017 IPR018392 LysM domain BV404_RS03000 127e97f19515b1fc0907f943e890af09 520 Gene3D G3DSA:3.10.350.10 411 456 3.3E-18 T 09-03-2017 IPR018392 LysM domain BV404_RS03000 127e97f19515b1fc0907f943e890af09 520 Pfam PF01476 LysM domain 469 510 2.3E-11 T 09-03-2017 IPR018392 LysM domain BV404_RS03000 127e97f19515b1fc0907f943e890af09 520 Pfam PF01476 LysM domain 412 454 2.9E-12 T 09-03-2017 IPR018392 LysM domain BV404_RS03000 127e97f19515b1fc0907f943e890af09 520 Pfam PF01476 LysM domain 338 380 1.4E-9 T 09-03-2017 IPR018392 LysM domain BV404_RS03000 127e97f19515b1fc0907f943e890af09 520 SUPERFAMILY SSF54106 467 512 6.41E-11 T 09-03-2017 IPR018392 LysM domain BV404_RS12810 d513bfe288d56f276cc4488e1c08c339 139 Pfam PF01894 Uncharacterised protein family UPF0047 19 135 3.8E-40 T 09-03-2017 IPR001602 Uncharacterised protein family UPF0047 BV404_RS12810 d513bfe288d56f276cc4488e1c08c339 139 PIRSF PIRSF004681 1 139 4.9E-47 T 09-03-2017 IPR001602 Uncharacterised protein family UPF0047 BV404_RS12810 d513bfe288d56f276cc4488e1c08c339 139 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 100 118 - T 09-03-2017 IPR001602 Uncharacterised protein family UPF0047 BV404_RS12810 d513bfe288d56f276cc4488e1c08c339 139 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 14 139 8.9E-46 T 09-03-2017 IPR001602 Uncharacterised protein family UPF0047 BV404_RS12810 d513bfe288d56f276cc4488e1c08c339 139 SUPERFAMILY SSF111038 1 139 1.44E-50 T 09-03-2017 IPR001602 Uncharacterised protein family UPF0047 BV404_RS12810 d513bfe288d56f276cc4488e1c08c339 139 Gene3D G3DSA:2.60.120.460 1 139 1.4E-59 T 09-03-2017 IPR001602 Uncharacterised protein family UPF0047 BV404_RS00980 09848a2f15fbabe0ce2fc0645b9731cc 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 09-03-2017 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS00980 09848a2f15fbabe0ce2fc0645b9731cc 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 1 76 1.0E-35 T 09-03-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS00980 09848a2f15fbabe0ce2fc0645b9731cc 84 Pfam PF00366 Ribosomal protein S17 10 77 1.3E-33 T 09-03-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS00980 09848a2f15fbabe0ce2fc0645b9731cc 84 SUPERFAMILY SSF50249 6 83 1.8E-33 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS00980 09848a2f15fbabe0ce2fc0645b9731cc 84 Gene3D G3DSA:2.40.50.140 6 82 1.9E-36 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS00980 09848a2f15fbabe0ce2fc0645b9731cc 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 2.4E-37 T 09-03-2017 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS00980 09848a2f15fbabe0ce2fc0645b9731cc 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 1.9E-14 T 09-03-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS00980 09848a2f15fbabe0ce2fc0645b9731cc 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 1.9E-14 T 09-03-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS00980 09848a2f15fbabe0ce2fc0645b9731cc 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 1.9E-14 T 09-03-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS00980 09848a2f15fbabe0ce2fc0645b9731cc 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 3 81 25.553 T 09-03-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS09925 46c6dad2cbd669b0a707e39f446fabc8 320 Gene3D G3DSA:3.40.50.1400 202 319 2.1E-31 T 09-03-2017 BV404_RS09925 46c6dad2cbd669b0a707e39f446fabc8 320 TIGRFAM TIGR00109 hemH: ferrochelatase 2 319 1.9E-105 T 09-03-2017 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 BV404_RS09925 46c6dad2cbd669b0a707e39f446fabc8 320 Hamap MF_00323 Ferrochelatase [hemH]. 5 320 37.267 T 09-03-2017 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 BV404_RS09925 46c6dad2cbd669b0a707e39f446fabc8 320 Gene3D G3DSA:3.40.50.1400 4 201 5.0E-66 T 09-03-2017 BV404_RS09925 46c6dad2cbd669b0a707e39f446fabc8 320 ProSitePatterns PS00534 Ferrochelatase signature. 189 207 - T 09-03-2017 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 BV404_RS09925 46c6dad2cbd669b0a707e39f446fabc8 320 SUPERFAMILY SSF53800 4 320 4.49E-104 T 09-03-2017 BV404_RS09925 46c6dad2cbd669b0a707e39f446fabc8 320 Pfam PF00762 Ferrochelatase 6 319 1.6E-109 T 09-03-2017 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 BV404_RS13620 7e7e8a963f93b6944eb1ce028b53f88e 559 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 363 557 5.8E-43 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 BV404_RS13620 7e7e8a963f93b6944eb1ce028b53f88e 559 SUPERFAMILY SSF58104 250 559 6.02E-74 T 09-03-2017 BV404_RS13620 7e7e8a963f93b6944eb1ce028b53f88e 559 Pfam PF17200 Single Cache domain 2 51 194 1.9E-41 T 09-03-2017 IPR033480 Single Cache domain 2 BV404_RS13620 7e7e8a963f93b6944eb1ce028b53f88e 559 Gene3D G3DSA:3.30.450.20 40 187 6.4E-50 T 09-03-2017 BV404_RS13620 7e7e8a963f93b6944eb1ce028b53f88e 559 Gene3D G3DSA:1.10.287.950 315 529 1.4E-55 T 09-03-2017 BV404_RS13620 7e7e8a963f93b6944eb1ce028b53f88e 559 SMART SM00304 228 282 2.6E-9 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 BV404_RS13620 7e7e8a963f93b6944eb1ce028b53f88e 559 Pfam PF00672 HAMP domain 209 278 1.4E-13 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 BV404_RS13620 7e7e8a963f93b6944eb1ce028b53f88e 559 SMART SM01049 46 135 1.7E-33 T 09-03-2017 IPR033480 Single Cache domain 2 BV404_RS13620 7e7e8a963f93b6944eb1ce028b53f88e 559 SMART SM00283 297 558 5.8E-57 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 BV404_RS10480 89cea48f9fecaf7efafac2c055d986fd 317 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 4 303 2.7E-135 T 09-03-2017 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 BV404_RS10480 89cea48f9fecaf7efafac2c055d986fd 317 Gene3D G3DSA:3.40.50.2300 57 174 1.3E-24 T 09-03-2017 BV404_RS10480 89cea48f9fecaf7efafac2c055d986fd 317 SMART SM00354 4 74 1.1E-28 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BV404_RS10480 89cea48f9fecaf7efafac2c055d986fd 317 SUPERFAMILY SSF53822 63 302 2.36E-58 T 09-03-2017 IPR028082 Periplasmic binding protein-like I BV404_RS10480 89cea48f9fecaf7efafac2c055d986fd 317 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 3.2E-17 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BV404_RS10480 89cea48f9fecaf7efafac2c055d986fd 317 Pfam PF13377 Periplasmic binding protein-like domain 168 301 2.7E-17 T 09-03-2017 BV404_RS10480 89cea48f9fecaf7efafac2c055d986fd 317 Gene3D G3DSA:1.10.260.40 6 56 1.1E-21 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 BV404_RS10480 89cea48f9fecaf7efafac2c055d986fd 317 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 09-03-2017 BV404_RS10480 89cea48f9fecaf7efafac2c055d986fd 317 Gene3D G3DSA:3.40.50.2300 175 277 3.0E-37 T 09-03-2017 BV404_RS10480 89cea48f9fecaf7efafac2c055d986fd 317 SUPERFAMILY SSF47413 3 60 3.09E-15 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 BV404_RS10020 1a4286ae265dd07e0bb46c52b2187079 669 SUPERFAMILY SSF50249 318 399 2.91E-29 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS10020 1a4286ae265dd07e0bb46c52b2187079 669 Gene3D G3DSA:3.40.50.10190 592 669 7.0E-24 T 09-03-2017 IPR001357 BRCT domain BV404_RS10020 1a4286ae265dd07e0bb46c52b2187079 669 SMART SM00292 594 669 1.1E-9 T 09-03-2017 IPR001357 BRCT domain BV404_RS10020 1a4286ae265dd07e0bb46c52b2187079 669 SMART SM00278 446 465 46.0 T 09-03-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BV404_RS10020 1a4286ae265dd07e0bb46c52b2187079 669 SMART SM00278 480 499 68.0 T 09-03-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BV404_RS10020 1a4286ae265dd07e0bb46c52b2187079 669 SMART SM00278 544 563 180.0 T 09-03-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BV404_RS10020 1a4286ae265dd07e0bb46c52b2187079 669 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 3 318 1.9E-135 T 09-03-2017 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 BV404_RS10020 1a4286ae265dd07e0bb46c52b2187079 669 Pfam PF12826 Helix-hairpin-helix motif 510 573 1.3E-22 T 09-03-2017 BV404_RS10020 1a4286ae265dd07e0bb46c52b2187079 669 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 11 663 2.0E-265 T 09-03-2017 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 BV404_RS10020 1a4286ae265dd07e0bb46c52b2187079 669 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 115 144 - T 09-03-2017 IPR018239 NAD-dependent DNA ligase, active site BV404_RS10020 1a4286ae265dd07e0bb46c52b2187079 669 Gene3D G3DSA:1.10.287.610 2 67 2.9E-29 T 09-03-2017 BV404_RS10020 1a4286ae265dd07e0bb46c52b2187079 669 Pfam PF14520 Helix-hairpin-helix domain 446 500 1.3E-5 T 09-03-2017 BV404_RS10020 1a4286ae265dd07e0bb46c52b2187079 669 SUPERFAMILY SSF52113 591 669 3.93E-18 T 09-03-2017 IPR001357 BRCT domain BV404_RS10020 1a4286ae265dd07e0bb46c52b2187079 669 PIRSF PIRSF001604 1 669 8.1E-253 T 09-03-2017 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 BV404_RS10020 1a4286ae265dd07e0bb46c52b2187079 669 SMART SM00532 3 448 1.0E-279 T 09-03-2017 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 BV404_RS10020 1a4286ae265dd07e0bb46c52b2187079 669 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 594 668 2.1E-11 T 09-03-2017 IPR001357 BRCT domain BV404_RS10020 1a4286ae265dd07e0bb46c52b2187079 669 Gene3D G3DSA:2.40.50.140 319 391 2.2E-35 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS10020 1a4286ae265dd07e0bb46c52b2187079 669 SUPERFAMILY SSF47781 404 584 1.26E-60 T 09-03-2017 IPR010994 RuvA domain 2-like BV404_RS10020 1a4286ae265dd07e0bb46c52b2187079 669 Gene3D G3DSA:1.10.150.20 504 584 1.1E-30 T 09-03-2017 BV404_RS10020 1a4286ae265dd07e0bb46c52b2187079 669 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 407 434 2.7E-9 T 09-03-2017 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 BV404_RS10020 1a4286ae265dd07e0bb46c52b2187079 669 Gene3D G3DSA:1.10.150.20 435 503 7.8E-27 T 09-03-2017 BV404_RS10020 1a4286ae265dd07e0bb46c52b2187079 669 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 331 346 - T 09-03-2017 IPR033136 NAD-dependent DNA ligase, conserved site BV404_RS10020 1a4286ae265dd07e0bb46c52b2187079 669 Gene3D G3DSA:3.30.470.30 119 252 6.9E-51 T 09-03-2017 BV404_RS10020 1a4286ae265dd07e0bb46c52b2187079 669 Hamap MF_01588 DNA ligase [ligA]. 2 668 54.023 T 09-03-2017 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 BV404_RS10020 1a4286ae265dd07e0bb46c52b2187079 669 SUPERFAMILY SSF56091 2 316 2.3E-125 T 09-03-2017 BV404_RS10020 1a4286ae265dd07e0bb46c52b2187079 669 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 322 398 4.9E-36 T 09-03-2017 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 BV404_RS08595 c11c22bbaf2ba0ad06019e46a02ee108 230 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 224 1.1E-64 T 09-03-2017 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BV404_RS08595 c11c22bbaf2ba0ad06019e46a02ee108 230 Gene3D G3DSA:3.40.50.1860 114 216 4.4E-37 T 09-03-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BV404_RS08595 c11c22bbaf2ba0ad06019e46a02ee108 230 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 229 1.1E-76 T 09-03-2017 IPR004380 Aspartate racemase GO:0006520|GO:0016855 BV404_RS08595 c11c22bbaf2ba0ad06019e46a02ee108 230 SUPERFAMILY SSF53681 1 116 5.23E-37 T 09-03-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BV404_RS08595 c11c22bbaf2ba0ad06019e46a02ee108 230 Gene3D G3DSA:3.40.50.1860 1 113 7.1E-44 T 09-03-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BV404_RS08595 c11c22bbaf2ba0ad06019e46a02ee108 230 SUPERFAMILY SSF53681 119 229 1.8E-33 T 09-03-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BV404_RS19910 4847e18a0608fb68904596d83316069f 607 SUPERFAMILY SSF52777 253 429 6.12E-36 T 09-03-2017 BV404_RS19910 4847e18a0608fb68904596d83316069f 607 Pfam PF00550 Phosphopantetheine attachment site 161 228 7.6E-10 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain BV404_RS19910 4847e18a0608fb68904596d83316069f 607 ProSitePatterns PS00012 Phosphopantetheine attachment site. 188 203 - T 09-03-2017 IPR006162 Phosphopantetheine attachment site BV404_RS19910 4847e18a0608fb68904596d83316069f 607 Pfam PF00668 Condensation domain 248 539 3.5E-42 T 09-03-2017 IPR001242 Condensation domain BV404_RS19910 4847e18a0608fb68904596d83316069f 607 SMART SM00823 Phosphopantetheine attachment site 164 233 0.0059 T 09-03-2017 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BV404_RS19910 4847e18a0608fb68904596d83316069f 607 Gene3D G3DSA:1.10.1200.10 157 232 1.5E-16 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain BV404_RS19910 4847e18a0608fb68904596d83316069f 607 SUPERFAMILY SSF52777 434 600 2.56E-30 T 09-03-2017 BV404_RS19910 4847e18a0608fb68904596d83316069f 607 SUPERFAMILY SSF47336 160 228 5.5E-13 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain BV404_RS00225 739a11b66118c2c5747b415a3ca00b7d 407 Pfam PF00482 Type II secretion system (T2SS), protein F 73 195 4.5E-35 T 09-03-2017 IPR018076 Type II secretion system F domain BV404_RS00225 739a11b66118c2c5747b415a3ca00b7d 407 Pfam PF00482 Type II secretion system (T2SS), protein F 275 397 3.7E-25 T 09-03-2017 IPR018076 Type II secretion system F domain BV404_RS00225 739a11b66118c2c5747b415a3ca00b7d 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 386 405 1.2E-37 T 09-03-2017 IPR003004 GspF/PilC family BV404_RS00225 739a11b66118c2c5747b415a3ca00b7d 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 370 384 1.2E-37 T 09-03-2017 IPR003004 GspF/PilC family BV404_RS00225 739a11b66118c2c5747b415a3ca00b7d 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 167 195 1.2E-37 T 09-03-2017 IPR003004 GspF/PilC family BV404_RS00225 739a11b66118c2c5747b415a3ca00b7d 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 68 80 1.2E-37 T 09-03-2017 IPR003004 GspF/PilC family BV404_RS00225 739a11b66118c2c5747b415a3ca00b7d 407 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 167 195 - T 09-03-2017 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 BV404_RS00225 739a11b66118c2c5747b415a3ca00b7d 407 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 404 1.3E-159 T 09-03-2017 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 BV404_RS08955 a9b8135358d3ebc686f29404a6e08abd 644 SMART SM00763 19 380 4.5E-215 T 09-03-2017 IPR013153 PrkA AAA domain BV404_RS08955 a9b8135358d3ebc686f29404a6e08abd 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 3.7E-74 T 09-03-2017 IPR010650 PrkA C-terminal domain BV404_RS08955 a9b8135358d3ebc686f29404a6e08abd 644 PIRSF PIRSF000549 1 644 1.0E-286 T 09-03-2017 IPR016230 Serine-protein kinase, PrkA GO:0004672 BV404_RS08955 a9b8135358d3ebc686f29404a6e08abd 644 SUPERFAMILY SSF52540 73 145 1.4E-17 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS08955 a9b8135358d3ebc686f29404a6e08abd 644 SUPERFAMILY SSF52540 236 368 1.4E-17 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS08955 a9b8135358d3ebc686f29404a6e08abd 644 Pfam PF08298 PrkA AAA domain 20 380 1.5E-173 T 09-03-2017 IPR013153 PrkA AAA domain BV404_RS08955 a9b8135358d3ebc686f29404a6e08abd 644 Gene3D G3DSA:3.40.50.300 243 329 1.4E-10 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS08955 a9b8135358d3ebc686f29404a6e08abd 644 Gene3D G3DSA:3.40.50.300 73 170 1.4E-10 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09285 8c2c1e566bb61517ec61cd4da7fa0cfc 637 Gene3D G3DSA:3.30.70.270 199 364 2.1E-28 T 09-03-2017 BV404_RS09285 8c2c1e566bb61517ec61cd4da7fa0cfc 637 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 194 353 4.0E-21 T 09-03-2017 IPR000160 GGDEF domain BV404_RS09285 8c2c1e566bb61517ec61cd4da7fa0cfc 637 SMART SM00052 370 617 4.5E-75 T 09-03-2017 IPR001633 EAL domain BV404_RS09285 8c2c1e566bb61517ec61cd4da7fa0cfc 637 Gene3D G3DSA:3.20.20.450 386 623 7.8E-71 T 09-03-2017 IPR001633 EAL domain BV404_RS09285 8c2c1e566bb61517ec61cd4da7fa0cfc 637 SMART SM00267 186 360 8.3E-16 T 09-03-2017 IPR000160 GGDEF domain BV404_RS09285 8c2c1e566bb61517ec61cd4da7fa0cfc 637 SUPERFAMILY SSF55073 202 362 5.89E-23 T 09-03-2017 IPR029787 Nucleotide cyclase BV404_RS09285 8c2c1e566bb61517ec61cd4da7fa0cfc 637 Pfam PF00563 EAL domain 386 612 4.5E-60 T 09-03-2017 IPR001633 EAL domain BV404_RS09285 8c2c1e566bb61517ec61cd4da7fa0cfc 637 SUPERFAMILY SSF141868 381 626 8.76E-68 T 09-03-2017 IPR001633 EAL domain BV404_RS09285 8c2c1e566bb61517ec61cd4da7fa0cfc 637 Pfam PF00990 Diguanylate cyclase, GGDEF domain 197 352 2.3E-23 T 09-03-2017 IPR000160 GGDEF domain BV404_RS06190 9d39c2157eb3cfe17253fbea1647658f 434 SUPERFAMILY SSF102114 44 387 6.02E-40 T 09-03-2017 BV404_RS06190 9d39c2157eb3cfe17253fbea1647658f 434 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 195 432 3.0E-10 T 09-03-2017 BV404_RS06190 9d39c2157eb3cfe17253fbea1647658f 434 Pfam PF13186 Iron-sulfur cluster-binding domain 318 378 2.0E-8 T 09-03-2017 IPR023885 4Fe4S-binding SPASM domain BV404_RS06190 9d39c2157eb3cfe17253fbea1647658f 434 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 35 423 3.5E-152 T 09-03-2017 IPR023867 Anaerobic sulphatase maturase, radical SAM GO:0016491 BV404_RS06190 9d39c2157eb3cfe17253fbea1647658f 434 Pfam PF04055 Radical SAM superfamily 44 212 1.3E-12 T 09-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 BV404_RS06190 9d39c2157eb3cfe17253fbea1647658f 434 Gene3D G3DSA:3.20.20.70 44 393 7.6E-43 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS06190 9d39c2157eb3cfe17253fbea1647658f 434 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 317 406 7.1E-18 T 09-03-2017 IPR023885 4Fe4S-binding SPASM domain BV404_RS05485 8eb0823f7733f223d9c3d9b2ea56d66c 198 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 29 186 1.7E-54 T 09-03-2017 IPR004564 Outer membrane lipoprotein carrier protein LolA-like BV404_RS05485 8eb0823f7733f223d9c3d9b2ea56d66c 198 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 10 197 2.2E-59 T 09-03-2017 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 BV404_RS05485 8eb0823f7733f223d9c3d9b2ea56d66c 198 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 5 196 31.142 T 09-03-2017 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 BV404_RS05485 8eb0823f7733f223d9c3d9b2ea56d66c 198 Gene3D G3DSA:2.50.20.10 20 197 1.0E-51 T 09-03-2017 BV404_RS05485 8eb0823f7733f223d9c3d9b2ea56d66c 198 SUPERFAMILY SSF89392 20 197 1.26E-50 T 09-03-2017 IPR029046 Lipoprotein localisation LolA/LolB/LppX BV404_RS13335 db6972f2e2ab2664b60460f590f7443a 430 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 1.9E-186 T 09-03-2017 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BV404_RS13335 db6972f2e2ab2664b60460f590f7443a 430 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 2.1E-82 T 09-03-2017 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BV404_RS13335 db6972f2e2ab2664b60460f590f7443a 430 SUPERFAMILY SSF56059 104 323 9.19E-69 T 09-03-2017 BV404_RS13335 db6972f2e2ab2664b60460f590f7443a 430 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 09-03-2017 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BV404_RS13335 db6972f2e2ab2664b60460f590f7443a 430 SUPERFAMILY SSF52440 1 103 1.32E-36 T 09-03-2017 IPR016185 Pre-ATP-grasp domain BV404_RS13335 db6972f2e2ab2664b60460f590f7443a 430 Gene3D G3DSA:3.30.470.20 191 328 1.7E-65 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 BV404_RS13335 db6972f2e2ab2664b60460f590f7443a 430 SMART SM01210 330 423 1.2E-56 T 09-03-2017 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BV404_RS13335 db6972f2e2ab2664b60460f590f7443a 430 Gene3D G3DSA:3.90.600.10 330 423 3.6E-36 T 09-03-2017 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BV404_RS13335 db6972f2e2ab2664b60460f590f7443a 430 Gene3D G3DSA:3.40.50.20 2 95 1.7E-37 T 09-03-2017 IPR016185 Pre-ATP-grasp domain BV404_RS13335 db6972f2e2ab2664b60460f590f7443a 430 SMART SM01209 103 296 1.6E-142 T 09-03-2017 BV404_RS13335 db6972f2e2ab2664b60460f590f7443a 430 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 5.0E-35 T 09-03-2017 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BV404_RS13335 db6972f2e2ab2664b60460f590f7443a 430 SUPERFAMILY SSF51246 329 424 9.94E-34 T 09-03-2017 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BV404_RS13335 db6972f2e2ab2664b60460f590f7443a 430 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 421 4.6E-30 T 09-03-2017 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BV404_RS13335 db6972f2e2ab2664b60460f590f7443a 430 Gene3D G3DSA:3.30.1490.20 121 190 1.6E-33 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 BV404_RS13335 db6972f2e2ab2664b60460f590f7443a 430 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 44.33 T 09-03-2017 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BV404_RS13090 113e6034dd978f477341de5fb8fc1d14 164 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 09-03-2017 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS13090 113e6034dd978f477341de5fb8fc1d14 164 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 159 24.308 T 09-03-2017 IPR022973 Ribosomal protein L10 BV404_RS13090 113e6034dd978f477341de5fb8fc1d14 164 SUPERFAMILY SSF160369 4 158 6.67E-44 T 09-03-2017 BV404_RS13090 113e6034dd978f477341de5fb8fc1d14 164 Pfam PF00466 Ribosomal protein L10 5 101 1.2E-25 T 09-03-2017 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 BV404_RS05270 0781475096ef32de242c137a040a3d06 543 Gene3D G3DSA:2.60.120.560 396 536 2.4E-27 T 09-03-2017 IPR013189 Glycosyl hydrolase family 32, C-terminal BV404_RS05270 0781475096ef32de242c137a040a3d06 543 SUPERFAMILY SSF75005 91 399 3.3E-89 T 09-03-2017 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain BV404_RS05270 0781475096ef32de242c137a040a3d06 543 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 98 398 3.8E-88 T 09-03-2017 IPR013148 Glycosyl hydrolase family 32, N-terminal BV404_RS05270 0781475096ef32de242c137a040a3d06 543 SUPERFAMILY SSF49899 398 533 2.06E-21 T 09-03-2017 IPR013320 Concanavalin A-like lectin/glucanase domain BV404_RS05270 0781475096ef32de242c137a040a3d06 543 SMART SM00640 98 502 1.9E-122 T 09-03-2017 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 BV404_RS05270 0781475096ef32de242c137a040a3d06 543 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 98 111 - T 09-03-2017 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 BV404_RS05270 0781475096ef32de242c137a040a3d06 543 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 438 502 1.9E-7 T 09-03-2017 IPR013189 Glycosyl hydrolase family 32, C-terminal BV404_RS05270 0781475096ef32de242c137a040a3d06 543 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 92 512 6.3E-135 T 09-03-2017 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 BV404_RS05270 0781475096ef32de242c137a040a3d06 543 Gene3D G3DSA:2.115.10.20 104 395 3.0E-19 T 09-03-2017 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain BV404_RS09305 15fcfb90fe91a4ef310af290fee66560 252 Pfam PF00175 Oxidoreductase NAD-binding domain 118 227 6.5E-16 T 09-03-2017 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 BV404_RS09305 15fcfb90fe91a4ef310af290fee66560 252 Gene3D G3DSA:2.40.30.10 8 102 2.5E-21 T 09-03-2017 BV404_RS09305 15fcfb90fe91a4ef310af290fee66560 252 SUPERFAMILY SSF63380 6 97 7.35E-18 T 09-03-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 BV404_RS09305 15fcfb90fe91a4ef310af290fee66560 252 SUPERFAMILY SSF52343 111 239 5.11E-32 T 09-03-2017 BV404_RS09305 15fcfb90fe91a4ef310af290fee66560 252 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 117 136 2.2E-5 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BV404_RS09305 15fcfb90fe91a4ef310af290fee66560 252 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 213 221 2.2E-5 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BV404_RS09305 15fcfb90fe91a4ef310af290fee66560 252 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 54 61 2.2E-5 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BV404_RS09305 15fcfb90fe91a4ef310af290fee66560 252 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 152 163 2.2E-5 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BV404_RS09305 15fcfb90fe91a4ef310af290fee66560 252 Pfam PF00970 Oxidoreductase FAD-binding domain 14 95 9.4E-7 T 09-03-2017 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 BV404_RS09305 15fcfb90fe91a4ef310af290fee66560 252 Gene3D G3DSA:3.40.50.80 113 252 9.6E-38 T 09-03-2017 BV404_RS12870 7a4ce7c035fd680e13be3ee71c54c1ad 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 09-03-2017 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS12870 7a4ce7c035fd680e13be3ee71c54c1ad 156 PIRSF PIRSF002122 3 156 1.1E-63 T 09-03-2017 IPR000235 Ribosomal protein S5/S7 GO:0006412 BV404_RS12870 7a4ce7c035fd680e13be3ee71c54c1ad 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 9.5E-72 T 09-03-2017 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 BV404_RS12870 7a4ce7c035fd680e13be3ee71c54c1ad 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 2.8E-66 T 09-03-2017 IPR023798 Ribosomal protein S7 domain BV404_RS12870 7a4ce7c035fd680e13be3ee71c54c1ad 156 SUPERFAMILY SSF47973 6 149 2.88E-60 T 09-03-2017 IPR023798 Ribosomal protein S7 domain BV404_RS12870 7a4ce7c035fd680e13be3ee71c54c1ad 156 Gene3D G3DSA:1.10.455.10 8 156 2.9E-69 T 09-03-2017 IPR023798 Ribosomal protein S7 domain BV404_RS12870 7a4ce7c035fd680e13be3ee71c54c1ad 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 36.025 T 09-03-2017 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 BV404_RS10740 065fcb0e060a88fae28c17951f2c0b2b 636 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 09-03-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 BV404_RS10740 065fcb0e060a88fae28c17951f2c0b2b 636 SUPERFAMILY SSF53067 186 381 8.43E-66 T 09-03-2017 BV404_RS10740 065fcb0e060a88fae28c17951f2c0b2b 636 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 336 350 - T 09-03-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 BV404_RS10740 065fcb0e060a88fae28c17951f2c0b2b 636 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 2.2E-286 T 09-03-2017 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453 BV404_RS10740 065fcb0e060a88fae28c17951f2c0b2b 636 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 631 36.184 T 09-03-2017 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453 BV404_RS10740 065fcb0e060a88fae28c17951f2c0b2b 636 Pfam PF00012 Hsp70 protein 4 601 1.9E-261 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BV404_RS10740 065fcb0e060a88fae28c17951f2c0b2b 636 SUPERFAMILY SSF100934 534 607 5.1E-5 T 09-03-2017 IPR029048 Heat shock protein 70kD, C-terminal domain Reactome: R-HSA-3371453 BV404_RS10740 065fcb0e060a88fae28c17951f2c0b2b 636 SUPERFAMILY SSF100920 383 539 4.19E-59 T 09-03-2017 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 BV404_RS10740 065fcb0e060a88fae28c17951f2c0b2b 636 Gene3D G3DSA:3.30.420.40 318 359 5.5E-32 T 09-03-2017 BV404_RS10740 065fcb0e060a88fae28c17951f2c0b2b 636 Gene3D G3DSA:3.30.420.40 195 228 5.5E-32 T 09-03-2017 BV404_RS10740 065fcb0e060a88fae28c17951f2c0b2b 636 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 09-03-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 BV404_RS10740 065fcb0e060a88fae28c17951f2c0b2b 636 Gene3D G3DSA:1.20.1270.10 531 600 5.3E-25 T 09-03-2017 IPR029048 Heat shock protein 70kD, C-terminal domain Reactome: R-HSA-3371453 BV404_RS10740 065fcb0e060a88fae28c17951f2c0b2b 636 Gene3D G3DSA:3.90.640.10 229 314 1.3E-31 T 09-03-2017 BV404_RS10740 065fcb0e060a88fae28c17951f2c0b2b 636 Gene3D G3DSA:3.30.30.30 53 106 1.8E-28 T 09-03-2017 BV404_RS10740 065fcb0e060a88fae28c17951f2c0b2b 636 Gene3D G3DSA:3.30.420.40 118 194 5.8E-65 T 09-03-2017 BV404_RS10740 065fcb0e060a88fae28c17951f2c0b2b 636 Gene3D G3DSA:3.30.420.40 4 52 5.8E-65 T 09-03-2017 BV404_RS10740 065fcb0e060a88fae28c17951f2c0b2b 636 PRINTS PR00301 70kDa heat shock protein signature 31 43 1.1E-79 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BV404_RS10740 065fcb0e060a88fae28c17951f2c0b2b 636 PRINTS PR00301 70kDa heat shock protein signature 53 61 1.1E-79 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BV404_RS10740 065fcb0e060a88fae28c17951f2c0b2b 636 PRINTS PR00301 70kDa heat shock protein signature 197 207 1.1E-79 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BV404_RS10740 065fcb0e060a88fae28c17951f2c0b2b 636 PRINTS PR00301 70kDa heat shock protein signature 387 406 1.1E-79 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BV404_RS10740 065fcb0e060a88fae28c17951f2c0b2b 636 PRINTS PR00301 70kDa heat shock protein signature 3 16 1.1E-79 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BV404_RS10740 065fcb0e060a88fae28c17951f2c0b2b 636 PRINTS PR00301 70kDa heat shock protein signature 137 157 1.1E-79 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BV404_RS10740 065fcb0e060a88fae28c17951f2c0b2b 636 PRINTS PR00301 70kDa heat shock protein signature 364 384 1.1E-79 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BV404_RS10740 065fcb0e060a88fae28c17951f2c0b2b 636 PRINTS PR00301 70kDa heat shock protein signature 333 349 1.1E-79 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BV404_RS10740 065fcb0e060a88fae28c17951f2c0b2b 636 PRINTS PR00301 70kDa heat shock protein signature 468 484 1.1E-79 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BV404_RS10740 065fcb0e060a88fae28c17951f2c0b2b 636 Gene3D G3DSA:2.60.34.10 389 530 2.9E-70 T 09-03-2017 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 BV404_RS10740 065fcb0e060a88fae28c17951f2c0b2b 636 SUPERFAMILY SSF53067 1 182 1.38E-66 T 09-03-2017 BV404_RS07705 232d8bbb65a1e9a0be80bed61d34d211 490 SMART SM00387 370 482 3.7E-6 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS07705 232d8bbb65a1e9a0be80bed61d34d211 490 Gene3D G3DSA:1.10.287.130 255 312 9.3E-10 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS07705 232d8bbb65a1e9a0be80bed61d34d211 490 Gene3D G3DSA:3.30.565.10 313 480 1.9E-16 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS07705 232d8bbb65a1e9a0be80bed61d34d211 490 SMART SM00388 259 325 6.8E-6 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS07705 232d8bbb65a1e9a0be80bed61d34d211 490 Pfam PF00512 His Kinase A (phospho-acceptor) domain 261 321 3.6E-8 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS07705 232d8bbb65a1e9a0be80bed61d34d211 490 SUPERFAMILY SSF55874 330 480 2.36E-18 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS07705 232d8bbb65a1e9a0be80bed61d34d211 490 SUPERFAMILY SSF47384 244 322 1.88E-10 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS04275 b0a82d9a05b28d33d5f5e4d7ae423ee7 337 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 5 336 6.4E-101 T 09-03-2017 IPR003770 Uncharacterised protein family UPF0755, YceG-like BV404_RS04275 b0a82d9a05b28d33d5f5e4d7ae423ee7 337 Gene3D G3DSA:3.30.160.60 73 110 1.7E-19 T 09-03-2017 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 BV404_RS04275 b0a82d9a05b28d33d5f5e4d7ae423ee7 337 Gene3D G3DSA:3.30.160.60 303 337 1.4E-18 T 09-03-2017 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 BV404_RS04275 b0a82d9a05b28d33d5f5e4d7ae423ee7 337 Pfam PF02618 YceG-like family 43 328 4.8E-84 T 09-03-2017 IPR003770 Uncharacterised protein family UPF0755, YceG-like BV404_RS01350 02adaab98940a289dad28798f64feaaf 309 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BV404_RS01350 02adaab98940a289dad28798f64feaaf 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 1.3E-26 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BV404_RS01350 02adaab98940a289dad28798f64feaaf 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 1.3E-26 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BV404_RS01350 02adaab98940a289dad28798f64feaaf 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 1.3E-26 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BV404_RS01350 02adaab98940a289dad28798f64feaaf 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 1.3E-26 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BV404_RS01350 02adaab98940a289dad28798f64feaaf 309 SUPERFAMILY SSF53671 4 306 1.31E-102 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BV404_RS01350 02adaab98940a289dad28798f64feaaf 309 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 1.5E-116 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 BV404_RS01350 02adaab98940a289dad28798f64feaaf 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 1.1E-35 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 BV404_RS01350 02adaab98940a289dad28798f64feaaf 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 1.1E-35 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 BV404_RS01350 02adaab98940a289dad28798f64feaaf 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 1.1E-35 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 BV404_RS01350 02adaab98940a289dad28798f64feaaf 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 1.1E-35 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 BV404_RS01350 02adaab98940a289dad28798f64feaaf 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 1.1E-35 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 BV404_RS01350 02adaab98940a289dad28798f64feaaf 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 1.1E-35 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 BV404_RS01350 02adaab98940a289dad28798f64feaaf 309 Gene3D G3DSA:3.40.50.1370 7 144 7.1E-50 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BV404_RS01350 02adaab98940a289dad28798f64feaaf 309 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 1.8E-42 T 09-03-2017 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 BV404_RS01350 02adaab98940a289dad28798f64feaaf 309 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 38.537 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 BV404_RS01350 02adaab98940a289dad28798f64feaaf 309 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 2.4E-34 T 09-03-2017 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 BV404_RS01350 02adaab98940a289dad28798f64feaaf 309 Gene3D G3DSA:3.40.50.1370 145 292 1.0E-55 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BV404_RS02415 03aa232157f49ace5487e149c50e8de4 283 SUPERFAMILY SSF55831 2 283 6.54E-91 T 09-03-2017 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 BV404_RS02415 03aa232157f49ace5487e149c50e8de4 283 Gene3D G3DSA:3.30.572.10 2 283 2.1E-78 T 09-03-2017 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 BV404_RS02415 03aa232157f49ace5487e149c50e8de4 283 ProSitePatterns PS00091 Thymidylate synthase active site. 140 168 - T 09-03-2017 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 BV404_RS02415 03aa232157f49ace5487e149c50e8de4 283 Hamap MF_00008 Thymidylate synthase [thyA]. 1 283 32.924 T 09-03-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 BV404_RS02415 03aa232157f49ace5487e149c50e8de4 283 Pfam PF00303 Thymidylate synthase 2 283 6.0E-75 T 09-03-2017 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 BV404_RS02415 03aa232157f49ace5487e149c50e8de4 283 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 283 5.3E-43 T 09-03-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 BV404_RS02415 03aa232157f49ace5487e149c50e8de4 283 PRINTS PR00108 Thymidylate synthase family signature 211 228 7.7E-14 T 09-03-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 BV404_RS02415 03aa232157f49ace5487e149c50e8de4 283 PRINTS PR00108 Thymidylate synthase family signature 44 65 7.7E-14 T 09-03-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 BV404_RS02415 03aa232157f49ace5487e149c50e8de4 283 PRINTS PR00108 Thymidylate synthase family signature 173 199 7.7E-14 T 09-03-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 BV404_RS02415 03aa232157f49ace5487e149c50e8de4 283 PRINTS PR00108 Thymidylate synthase family signature 129 148 7.7E-14 T 09-03-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 BV404_RS11925 1c5185e4a49344d68a1b27c47de55b8f 860 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 652 695 1.1E-18 T 09-03-2017 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 BV404_RS11925 1c5185e4a49344d68a1b27c47de55b8f 860 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 860 199.388 T 09-03-2017 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 BV404_RS11925 1c5185e4a49344d68a1b27c47de55b8f 860 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 839 0.0 T 09-03-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 BV404_RS11925 1c5185e4a49344d68a1b27c47de55b8f 860 SUPERFAMILY SSF101353 255 462 6.28E-59 T 09-03-2017 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 BV404_RS11925 1c5185e4a49344d68a1b27c47de55b8f 860 Pfam PF02272 DHHA1 domain 786 853 1.0E-15 T 09-03-2017 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 BV404_RS11925 1c5185e4a49344d68a1b27c47de55b8f 860 Pfam PF01411 tRNA synthetases class II (A) 7 555 3.0E-225 T 09-03-2017 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 BV404_RS11925 1c5185e4a49344d68a1b27c47de55b8f 860 SMART SM00863 652 695 3.9E-22 T 09-03-2017 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 BV404_RS11925 1c5185e4a49344d68a1b27c47de55b8f 860 Gene3D G3DSA:3.30.930.10 3 251 8.4E-123 T 09-03-2017 BV404_RS11925 1c5185e4a49344d68a1b27c47de55b8f 860 SUPERFAMILY SSF55186 551 710 2.09E-52 T 09-03-2017 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 BV404_RS11925 1c5185e4a49344d68a1b27c47de55b8f 860 SUPERFAMILY SSF50447 453 551 1.41E-19 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain BV404_RS11925 1c5185e4a49344d68a1b27c47de55b8f 860 SUPERFAMILY SSF55681 3 254 6.46E-109 T 09-03-2017 BV404_RS11925 1c5185e4a49344d68a1b27c47de55b8f 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 281 297 4.8E-31 T 09-03-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 BV404_RS11925 1c5185e4a49344d68a1b27c47de55b8f 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 4.8E-31 T 09-03-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 BV404_RS11925 1c5185e4a49344d68a1b27c47de55b8f 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 208 219 4.8E-31 T 09-03-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 BV404_RS11925 1c5185e4a49344d68a1b27c47de55b8f 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 235 248 4.8E-31 T 09-03-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 BV404_RS11925 1c5185e4a49344d68a1b27c47de55b8f 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 305 318 4.8E-31 T 09-03-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 BV404_RS01785 2f6d48133f09a4e37c1a46fa453f9e49 741 Pfam PF02824 TGS domain 403 462 2.1E-21 T 09-03-2017 IPR004095 TGS KEGG: 00970+6.1.1.3 BV404_RS01785 2f6d48133f09a4e37c1a46fa453f9e49 741 Pfam PF13291 ACT domain 663 739 8.3E-16 T 09-03-2017 IPR002912 ACT domain GO:0008152|GO:0016597 BV404_RS01785 2f6d48133f09a4e37c1a46fa453f9e49 741 Gene3D G3DSA:3.30.460.10 193 339 1.7E-48 T 09-03-2017 BV404_RS01785 2f6d48133f09a4e37c1a46fa453f9e49 741 SUPERFAMILY SSF81301 195 407 4.58E-61 T 09-03-2017 BV404_RS01785 2f6d48133f09a4e37c1a46fa453f9e49 741 Gene3D G3DSA:3.10.20.30 403 464 4.8E-24 T 09-03-2017 IPR012675 Beta-grasp domain BV404_RS01785 2f6d48133f09a4e37c1a46fa453f9e49 741 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 64 739 1.3E-182 T 09-03-2017 IPR004811 RelA/SpoT family GO:0015969 BV404_RS01785 2f6d48133f09a4e37c1a46fa453f9e49 741 SUPERFAMILY SSF55021 664 739 2.52E-10 T 09-03-2017 BV404_RS01785 2f6d48133f09a4e37c1a46fa453f9e49 741 Gene3D G3DSA:3.30.70.260 663 737 3.0E-18 T 09-03-2017 BV404_RS01785 2f6d48133f09a4e37c1a46fa453f9e49 741 SUPERFAMILY SSF81271 396 462 1.22E-20 T 09-03-2017 IPR012676 TGS-like KEGG: 00970+6.1.1.3 BV404_RS01785 2f6d48133f09a4e37c1a46fa453f9e49 741 Pfam PF13328 HD domain 57 190 4.3E-38 T 09-03-2017 IPR003607 HD/PDEase domain BV404_RS01785 2f6d48133f09a4e37c1a46fa453f9e49 741 SMART SM00954 250 360 2.6E-64 T 09-03-2017 IPR007685 RelA/SpoT GO:0015969 BV404_RS01785 2f6d48133f09a4e37c1a46fa453f9e49 741 SUPERFAMILY SSF109604 50 205 1.54E-43 T 09-03-2017 BV404_RS01785 2f6d48133f09a4e37c1a46fa453f9e49 741 Pfam PF04607 Region found in RelA / SpoT proteins 250 359 1.0E-36 T 09-03-2017 IPR007685 RelA/SpoT GO:0015969 BV404_RS07875 9b0566775ec947f1777d7e5327966460 239 SUPERFAMILY SSF48452 35 194 2.39E-19 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BV404_RS07875 9b0566775ec947f1777d7e5327966460 239 Gene3D G3DSA:1.25.40.10 35 232 3.2E-27 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BV404_RS07875 9b0566775ec947f1777d7e5327966460 239 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 7 238 1.4E-75 T 09-03-2017 IPR013360 Pilus biogenesis/stability type IV, PilW BV404_RS07875 9b0566775ec947f1777d7e5327966460 239 SMART SM00028 35 68 5.3 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 BV404_RS07875 9b0566775ec947f1777d7e5327966460 239 SMART SM00028 139 172 1.5 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 BV404_RS07875 9b0566775ec947f1777d7e5327966460 239 SMART SM00028 103 136 42.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 BV404_RS07875 9b0566775ec947f1777d7e5327966460 239 SMART SM00028 69 102 54.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 BV404_RS07875 9b0566775ec947f1777d7e5327966460 239 Pfam PF13424 Tetratricopeptide repeat 104 168 1.4E-7 T 09-03-2017 BV404_RS07875 9b0566775ec947f1777d7e5327966460 239 SMART SM00386 83 115 37.0 T 09-03-2017 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 BV404_RS07875 9b0566775ec947f1777d7e5327966460 239 SMART SM00386 153 185 19.0 T 09-03-2017 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 BV404_RS07875 9b0566775ec947f1777d7e5327966460 239 SMART SM00386 187 219 1100.0 T 09-03-2017 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 BV404_RS07875 9b0566775ec947f1777d7e5327966460 239 SMART SM00386 49 81 330.0 T 09-03-2017 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 BV404_RS14515 e70601ed39bf267e8f5e5a727e63f585 500 SUPERFAMILY SSF50443 329 496 2.28E-63 T 09-03-2017 IPR004216 L-fucose/L-arabinose isomerase, C-terminal BV404_RS14515 e70601ed39bf267e8f5e5a727e63f585 500 PIRSF PIRSF001478 1 498 6.3E-233 T 09-03-2017 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4 BV404_RS14515 e70601ed39bf267e8f5e5a727e63f585 500 SUPERFAMILY SSF53743 1 325 5.23E-113 T 09-03-2017 IPR009015 L-fucose isomerase, N-terminal/central domain GO:0005737|GO:0005996|GO:0016861 BV404_RS14515 e70601ed39bf267e8f5e5a727e63f585 500 Pfam PF11762 L-arabinose isomerase C-terminal domain 361 474 1.3E-43 T 09-03-2017 IPR024664 L-arabinose isomerase, C-terminal KEGG: 00040+5.3.1.4 BV404_RS14515 e70601ed39bf267e8f5e5a727e63f585 500 ProDom PD018364 ISOMERASE L-ARABINOSE ARABINOSE METABOLISM CARBOHYDRATE CATABOLISM ARAA 1 304 1.0E-145 T 09-03-2017 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4 BV404_RS14515 e70601ed39bf267e8f5e5a727e63f585 500 Hamap MF_00519 L-arabinose isomerase [araA]. 1 475 60.398 T 09-03-2017 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4 BV404_RS14515 e70601ed39bf267e8f5e5a727e63f585 500 Pfam PF02610 L-arabinose isomerase 5 358 4.8E-164 T 09-03-2017 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4 BV404_RS10315 17f9bc24cbb5706a9eab0719448037df 402 PIRSF PIRSF001480 8 402 3.0E-100 T 09-03-2017 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BV404_RS10315 17f9bc24cbb5706a9eab0719448037df 402 Pfam PF01238 Phosphomannose isomerase type I 12 356 1.9E-81 T 09-03-2017 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BV404_RS10315 17f9bc24cbb5706a9eab0719448037df 402 Gene3D G3DSA:2.60.120.10 300 385 4.5E-5 T 09-03-2017 IPR014710 RmlC-like jelly roll fold BV404_RS10315 17f9bc24cbb5706a9eab0719448037df 402 Gene3D G3DSA:1.10.441.10 150 243 1.6E-29 T 09-03-2017 BV404_RS10315 17f9bc24cbb5706a9eab0719448037df 402 Gene3D G3DSA:1.10.441.10 286 299 1.6E-29 T 09-03-2017 BV404_RS10315 17f9bc24cbb5706a9eab0719448037df 402 SUPERFAMILY SSF51182 9 386 3.75E-99 T 09-03-2017 IPR011051 RmlC-like cupin domain BV404_RS10315 17f9bc24cbb5706a9eab0719448037df 402 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 9 393 6.8E-95 T 09-03-2017 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BV404_RS10315 17f9bc24cbb5706a9eab0719448037df 402 Gene3D G3DSA:2.60.120.10 250 285 6.3E-66 T 09-03-2017 IPR014710 RmlC-like jelly roll fold BV404_RS10315 17f9bc24cbb5706a9eab0719448037df 402 Gene3D G3DSA:2.60.120.10 16 149 6.3E-66 T 09-03-2017 IPR014710 RmlC-like jelly roll fold BV404_RS10315 17f9bc24cbb5706a9eab0719448037df 402 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 135 143 - T 09-03-2017 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BV404_RS10315 17f9bc24cbb5706a9eab0719448037df 402 PRINTS PR00714 Phosphomannose isomerase type I signature 14 32 1.0E-68 T 09-03-2017 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BV404_RS10315 17f9bc24cbb5706a9eab0719448037df 402 PRINTS PR00714 Phosphomannose isomerase type I signature 135 158 1.0E-68 T 09-03-2017 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BV404_RS10315 17f9bc24cbb5706a9eab0719448037df 402 PRINTS PR00714 Phosphomannose isomerase type I signature 90 111 1.0E-68 T 09-03-2017 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BV404_RS10315 17f9bc24cbb5706a9eab0719448037df 402 PRINTS PR00714 Phosphomannose isomerase type I signature 267 286 1.0E-68 T 09-03-2017 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BV404_RS10315 17f9bc24cbb5706a9eab0719448037df 402 PRINTS PR00714 Phosphomannose isomerase type I signature 232 247 1.0E-68 T 09-03-2017 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BV404_RS10315 17f9bc24cbb5706a9eab0719448037df 402 PRINTS PR00714 Phosphomannose isomerase type I signature 248 267 1.0E-68 T 09-03-2017 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BV404_RS10315 17f9bc24cbb5706a9eab0719448037df 402 PRINTS PR00714 Phosphomannose isomerase type I signature 42 57 1.0E-68 T 09-03-2017 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BV404_RS10315 17f9bc24cbb5706a9eab0719448037df 402 PRINTS PR00714 Phosphomannose isomerase type I signature 286 305 1.0E-68 T 09-03-2017 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BV404_RS10315 17f9bc24cbb5706a9eab0719448037df 402 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 267 292 - T 09-03-2017 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BV404_RS12170 a8c77d357eb91109f2938eb6e0b55148 470 Gene3D G3DSA:2.40.33.10 73 168 1.2E-32 T 09-03-2017 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BV404_RS12170 a8c77d357eb91109f2938eb6e0b55148 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 1.9E-187 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BV404_RS12170 a8c77d357eb91109f2938eb6e0b55148 470 SUPERFAMILY SSF50800 70 167 7.67E-30 T 09-03-2017 IPR011037 Pyruvate kinase-like, insert domain BV404_RS12170 a8c77d357eb91109f2938eb6e0b55148 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 8.7E-80 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BV404_RS12170 a8c77d357eb91109f2938eb6e0b55148 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 8.7E-80 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BV404_RS12170 a8c77d357eb91109f2938eb6e0b55148 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 8.7E-80 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BV404_RS12170 a8c77d357eb91109f2938eb6e0b55148 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 8.7E-80 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BV404_RS12170 a8c77d357eb91109f2938eb6e0b55148 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 8.7E-80 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BV404_RS12170 a8c77d357eb91109f2938eb6e0b55148 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 8.7E-80 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BV404_RS12170 a8c77d357eb91109f2938eb6e0b55148 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 8.7E-80 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BV404_RS12170 a8c77d357eb91109f2938eb6e0b55148 470 SUPERFAMILY SSF51621 1 74 2.72E-102 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 BV404_RS12170 a8c77d357eb91109f2938eb6e0b55148 470 SUPERFAMILY SSF51621 156 339 2.72E-102 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 BV404_RS12170 a8c77d357eb91109f2938eb6e0b55148 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 2.2E-29 T 09-03-2017 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BV404_RS12170 a8c77d357eb91109f2938eb6e0b55148 470 SUPERFAMILY SSF52935 323 469 1.57E-34 T 09-03-2017 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BV404_RS12170 a8c77d357eb91109f2938eb6e0b55148 470 Gene3D G3DSA:3.40.1380.20 327 468 2.5E-44 T 09-03-2017 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BV404_RS12170 a8c77d357eb91109f2938eb6e0b55148 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 341 6.4E-156 T 09-03-2017 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BV404_RS12170 a8c77d357eb91109f2938eb6e0b55148 470 Gene3D G3DSA:3.20.20.60 2 72 1.4E-118 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 BV404_RS12170 a8c77d357eb91109f2938eb6e0b55148 470 Gene3D G3DSA:3.20.20.60 169 326 1.4E-118 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 BV404_RS12170 a8c77d357eb91109f2938eb6e0b55148 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 09-03-2017 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BV404_RS08690 0fca6cd07933e4cdb91e5716d237ea51 284 Pfam PF01380 SIS domain 124 252 1.2E-25 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 BV404_RS08690 0fca6cd07933e4cdb91e5716d237ea51 284 Gene3D G3DSA:3.40.50.10490 96 271 9.6E-38 T 09-03-2017 BV404_RS08690 0fca6cd07933e4cdb91e5716d237ea51 284 SUPERFAMILY SSF46689 1 80 1.58E-21 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS08690 0fca6cd07933e4cdb91e5716d237ea51 284 Gene3D G3DSA:1.10.10.10 1 80 2.5E-31 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS08690 0fca6cd07933e4cdb91e5716d237ea51 284 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 1.0E-28 T 09-03-2017 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 BV404_RS08690 0fca6cd07933e4cdb91e5716d237ea51 284 SUPERFAMILY SSF53697 93 279 1.71E-40 T 09-03-2017 BV404_RS03875 e955abe4c1d2940e82490004bf5219fd 197 SUPERFAMILY SSF54593 2 196 9.0E-64 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BV404_RS03875 e955abe4c1d2940e82490004bf5219fd 197 Pfam PF06185 YecM protein 14 196 7.5E-67 T 09-03-2017 IPR010393 Protein of unknown function DUF991 BV404_RS03875 e955abe4c1d2940e82490004bf5219fd 197 Gene3D G3DSA:3.10.180.10 3 197 5.6E-68 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BV404_RS09950 9b1052f4a331fd3f1eee4b821579644e 92 SUPERFAMILY SSF52833 4 87 1.1E-29 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS09950 9b1052f4a331fd3f1eee4b821579644e 92 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 6 78 1.1E-25 T 09-03-2017 IPR011893 Selenoprotein, Rdx type BV404_RS09950 9b1052f4a331fd3f1eee4b821579644e 92 Pfam PF10262 Rdx family 5 78 5.0E-32 T 09-03-2017 IPR011893 Selenoprotein, Rdx type BV404_RS09950 9b1052f4a331fd3f1eee4b821579644e 92 Gene3D G3DSA:3.40.30.10 2 92 1.9E-43 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS18330 c3c50f0d024aca580872e7ae72dabc34 86 Gene3D G3DSA:1.20.1330.10 1 85 1.2E-33 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BV404_RS18330 c3c50f0d024aca580872e7ae72dabc34 86 SUPERFAMILY SSF64518 1 85 2.22E-30 T 09-03-2017 BV404_RS18330 c3c50f0d024aca580872e7ae72dabc34 86 PRINTS PR00207 Flagellin signature 9 28 1.1E-15 T 09-03-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BV404_RS18330 c3c50f0d024aca580872e7ae72dabc34 86 PRINTS PR00207 Flagellin signature 44 67 1.1E-15 T 09-03-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BV404_RS18330 c3c50f0d024aca580872e7ae72dabc34 86 Pfam PF00669 Bacterial flagellin N-terminal helical region 1 74 1.4E-21 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BV404_RS11190 08bd7e19842fb198ba60d76152ee05b5 1173 Gene3D G3DSA:3.40.50.300 374 466 9.0E-9 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11190 08bd7e19842fb198ba60d76152ee05b5 1173 Gene3D G3DSA:3.40.50.300 672 768 9.0E-9 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11190 08bd7e19842fb198ba60d76152ee05b5 1173 SUPERFAMILY SSF52980 843 1151 3.16E-72 T 09-03-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 BV404_RS11190 08bd7e19842fb198ba60d76152ee05b5 1173 Gene3D G3DSA:1.10.10.160 86 182 6.0E-36 T 09-03-2017 IPR013986 DExx box DNA helicase domain BV404_RS11190 08bd7e19842fb198ba60d76152ee05b5 1173 SUPERFAMILY SSF52540 2 361 4.6E-123 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11190 08bd7e19842fb198ba60d76152ee05b5 1173 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1162 20.825 T 09-03-2017 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 BV404_RS11190 08bd7e19842fb198ba60d76152ee05b5 1173 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 2 820 1.1E-300 T 09-03-2017 BV404_RS11190 08bd7e19842fb198ba60d76152ee05b5 1173 SUPERFAMILY SSF52540 380 825 1.17E-103 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11190 08bd7e19842fb198ba60d76152ee05b5 1173 PIRSF PIRSF000980 1 1163 0.0 T 09-03-2017 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 BV404_RS11190 08bd7e19842fb198ba60d76152ee05b5 1173 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1125 0.0 T 09-03-2017 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 BV404_RS11965 29cfc84e8a11a13dc2ee2734088e1146 255 Pfam PF01975 Survival protein SurE 8 186 6.8E-58 T 09-03-2017 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 BV404_RS11965 29cfc84e8a11a13dc2ee2734088e1146 255 Gene3D G3DSA:3.40.1210.10 6 250 4.4E-88 T 09-03-2017 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 BV404_RS11965 29cfc84e8a11a13dc2ee2734088e1146 255 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 6 254 41.417 T 09-03-2017 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 BV404_RS11965 29cfc84e8a11a13dc2ee2734088e1146 255 SUPERFAMILY SSF64167 6 251 3.79E-85 T 09-03-2017 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 BV404_RS11965 29cfc84e8a11a13dc2ee2734088e1146 255 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 7 237 4.6E-71 T 09-03-2017 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 BV404_RS03150 c3e244e3d90f18693f2850b054437b4a 144 PIRSF PIRSF028687 1 144 1.9E-61 T 09-03-2017 IPR007293 Flagellar protein FlgP BV404_RS03150 c3e244e3d90f18693f2850b054437b4a 144 Pfam PF02169 LPP20 lipoprotein 27 119 2.0E-9 T 09-03-2017 IPR024952 Lipoprotein LPP20-like BV404_RS10270 163137b8fb8092e6fbca6560aad53911 544 SUPERFAMILY SSF53067 280 532 6.96E-56 T 09-03-2017 BV404_RS10270 163137b8fb8092e6fbca6560aad53911 544 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 281 489 3.3E-46 T 09-03-2017 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 BV404_RS10270 163137b8fb8092e6fbca6560aad53911 544 TIGRFAM TIGR01315 5C_CHO_kinase: FGGY-family pentulose kinase 5 537 9.0E-206 T 09-03-2017 IPR006003 Carbohydrate kinase, FGGY-related GO:0005975|GO:0016773 BV404_RS10270 163137b8fb8092e6fbca6560aad53911 544 Gene3D G3DSA:3.30.420.40 3 262 2.2E-65 T 09-03-2017 BV404_RS10270 163137b8fb8092e6fbca6560aad53911 544 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 208 2.7E-24 T 09-03-2017 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 BV404_RS10270 163137b8fb8092e6fbca6560aad53911 544 PIRSF PIRSF000538 2 542 3.1E-70 T 09-03-2017 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 BV404_RS10270 163137b8fb8092e6fbca6560aad53911 544 Gene3D G3DSA:3.30.420.40 279 534 3.4E-64 T 09-03-2017 BV404_RS10270 163137b8fb8092e6fbca6560aad53911 544 SUPERFAMILY SSF53067 4 263 2.46E-56 T 09-03-2017 BV404_RS17475 b953339ab163eb8dcc744fcd0b5cd574 107 SUPERFAMILY SSF48435 1 107 4.45E-29 T 09-03-2017 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 BV404_RS17475 b953339ab163eb8dcc744fcd0b5cd574 107 Gene3D G3DSA:1.25.20.10 1 107 8.1E-31 T 09-03-2017 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 BV404_RS02715 7ee53e7de00d874aa151d6db404457eb 407 Gene3D G3DSA:3.40.50.80 269 406 1.3E-40 T 09-03-2017 BV404_RS02715 7ee53e7de00d874aa151d6db404457eb 407 Gene3D G3DSA:2.40.30.10 124 264 1.1E-59 T 09-03-2017 BV404_RS02715 7ee53e7de00d874aa151d6db404457eb 407 SUPERFAMILY SSF63380 105 272 6.3E-34 T 09-03-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 BV404_RS02715 7ee53e7de00d874aa151d6db404457eb 407 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 1 407 62.475 T 09-03-2017 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 BV404_RS02715 7ee53e7de00d874aa151d6db404457eb 407 PIRSF PIRSF000044 1 407 7.8E-218 T 09-03-2017 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 BV404_RS02715 7ee53e7de00d874aa151d6db404457eb 407 SUPERFAMILY SSF54292 36 124 4.14E-21 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 BV404_RS02715 7ee53e7de00d874aa151d6db404457eb 407 SUPERFAMILY SSF52343 258 402 5.11E-36 T 09-03-2017 BV404_RS02715 7ee53e7de00d874aa151d6db404457eb 407 Pfam PF00175 Oxidoreductase NAD-binding domain 277 385 9.9E-18 T 09-03-2017 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 BV404_RS02715 7ee53e7de00d874aa151d6db404457eb 407 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 39 115 1.3E-10 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 BV404_RS02715 7ee53e7de00d874aa151d6db404457eb 407 Pfam PF00970 Oxidoreductase FAD-binding domain 204 266 2.0E-8 T 09-03-2017 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 BV404_RS02715 7ee53e7de00d874aa151d6db404457eb 407 Gene3D G3DSA:3.10.20.30 34 123 2.8E-20 T 09-03-2017 IPR012675 Beta-grasp domain BV404_RS02715 7ee53e7de00d874aa151d6db404457eb 407 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 3 407 1.3E-228 T 09-03-2017 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 BV404_RS03565 b4093ac90bedff6ad79c78b89e78a780 350 SMART SM00387 233 339 1.7E-29 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS03565 b4093ac90bedff6ad79c78b89e78a780 350 SMART SM00388 124 190 1.5E-12 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS03565 b4093ac90bedff6ad79c78b89e78a780 350 Pfam PF00512 His Kinase A (phospho-acceptor) domain 124 188 1.4E-10 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS03565 b4093ac90bedff6ad79c78b89e78a780 350 Pfam PF13188 PAS domain 20 73 2.5E-7 T 09-03-2017 IPR000014 PAS domain BV404_RS03565 b4093ac90bedff6ad79c78b89e78a780 350 Gene3D G3DSA:1.10.287.130 121 186 3.9E-7 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS03565 b4093ac90bedff6ad79c78b89e78a780 350 SUPERFAMILY SSF55785 7 87 2.44E-10 T 09-03-2017 IPR000014 PAS domain BV404_RS03565 b4093ac90bedff6ad79c78b89e78a780 350 SMART SM00091 20 83 4.7E-7 T 09-03-2017 IPR000014 PAS domain BV404_RS03565 b4093ac90bedff6ad79c78b89e78a780 350 PRINTS PR00344 Bacterial sensor protein C-terminal signature 270 284 2.7E-18 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS03565 b4093ac90bedff6ad79c78b89e78a780 350 PRINTS PR00344 Bacterial sensor protein C-terminal signature 323 336 2.7E-18 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS03565 b4093ac90bedff6ad79c78b89e78a780 350 PRINTS PR00344 Bacterial sensor protein C-terminal signature 299 317 2.7E-18 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS03565 b4093ac90bedff6ad79c78b89e78a780 350 PRINTS PR00344 Bacterial sensor protein C-terminal signature 288 298 2.7E-18 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS03565 b4093ac90bedff6ad79c78b89e78a780 350 SUPERFAMILY SSF47384 119 190 9.02E-10 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS03565 b4093ac90bedff6ad79c78b89e78a780 350 Gene3D G3DSA:3.30.565.10 194 337 9.3E-38 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS03565 b4093ac90bedff6ad79c78b89e78a780 350 Gene3D G3DSA:3.30.450.20 20 89 9.9E-10 T 09-03-2017 BV404_RS03565 b4093ac90bedff6ad79c78b89e78a780 350 SUPERFAMILY SSF55874 179 338 8.38E-37 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS03565 b4093ac90bedff6ad79c78b89e78a780 350 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 237 338 9.6E-20 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS21035 9162350f1a076510f45e9105045ddd58 202 Gene3D G3DSA:3.40.50.300 2 200 1.3E-56 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS21035 9162350f1a076510f45e9105045ddd58 202 SUPERFAMILY SSF52540 2 200 1.73E-57 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS21035 9162350f1a076510f45e9105045ddd58 202 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS21035 9162350f1a076510f45e9105045ddd58 202 Pfam PF00005 ABC transporter 22 168 3.9E-30 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS21035 9162350f1a076510f45e9105045ddd58 202 SMART SM00382 31 201 1.2E-6 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS13095 f505c15ae1ac4e8259b161be65b0ad75 233 PIRSF PIRSF002155 1 227 1.1E-79 T 09-03-2017 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS13095 f505c15ae1ac4e8259b161be65b0ad75 233 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 09-03-2017 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS13095 f505c15ae1ac4e8259b161be65b0ad75 233 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 2.4E-52 T 09-03-2017 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein BV404_RS13095 f505c15ae1ac4e8259b161be65b0ad75 233 SUPERFAMILY SSF56808 6 225 1.11E-82 T 09-03-2017 IPR023674 Ribosomal protein L1-like BV404_RS13095 f505c15ae1ac4e8259b161be65b0ad75 233 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 2.2E-107 T 09-03-2017 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 BV404_RS13095 f505c15ae1ac4e8259b161be65b0ad75 233 Gene3D G3DSA:3.40.50.790 69 159 6.4E-41 T 09-03-2017 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich BV404_RS13095 f505c15ae1ac4e8259b161be65b0ad75 233 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.532 T 09-03-2017 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 BV404_RS13095 f505c15ae1ac4e8259b161be65b0ad75 233 Gene3D G3DSA:3.30.190.20 18 68 9.9E-48 T 09-03-2017 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 BV404_RS13095 f505c15ae1ac4e8259b161be65b0ad75 233 Gene3D G3DSA:3.30.190.20 161 225 9.9E-48 T 09-03-2017 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 BV404_RS05920 2cf6627a234481b3a6e813bf6b022432 242 SMART SM00062 11 234 3.3E-4 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BV404_RS05920 2cf6627a234481b3a6e813bf6b022432 242 SUPERFAMILY SSF53850 15 230 2.72E-43 T 09-03-2017 BV404_RS05920 2cf6627a234481b3a6e813bf6b022432 242 Gene3D G3DSA:3.40.190.10 86 171 8.4E-7 T 09-03-2017 BV404_RS05920 2cf6627a234481b3a6e813bf6b022432 242 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 15 230 4.5E-28 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BV404_RS05920 2cf6627a234481b3a6e813bf6b022432 242 Gene3D G3DSA:3.40.190.10 190 230 1.7E-16 T 09-03-2017 BV404_RS05920 2cf6627a234481b3a6e813bf6b022432 242 Gene3D G3DSA:3.40.190.10 14 85 1.7E-16 T 09-03-2017 BV404_RS01645 d7c2aaad623b5b2a684045d58dee8cc0 164 Gene3D G3DSA:3.30.70.1150 83 162 3.5E-28 T 09-03-2017 BV404_RS01645 d7c2aaad623b5b2a684045d58dee8cc0 164 Pfam PF13710 ACT domain 11 73 3.6E-18 T 09-03-2017 BV404_RS01645 d7c2aaad623b5b2a684045d58dee8cc0 164 SUPERFAMILY SSF55021 79 162 1.1E-26 T 09-03-2017 BV404_RS01645 d7c2aaad623b5b2a684045d58dee8cc0 164 SUPERFAMILY SSF55021 1 75 3.15E-22 T 09-03-2017 BV404_RS01645 d7c2aaad623b5b2a684045d58dee8cc0 164 Pfam PF10369 Small subunit of acetolactate synthase 84 158 3.5E-25 T 09-03-2017 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 BV404_RS01645 d7c2aaad623b5b2a684045d58dee8cc0 164 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 159 5.1E-62 T 09-03-2017 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 BV404_RS01645 d7c2aaad623b5b2a684045d58dee8cc0 164 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 75 9.0E-37 T 09-03-2017 BV404_RS01645 d7c2aaad623b5b2a684045d58dee8cc0 164 Gene3D G3DSA:3.30.70.260 1 77 3.0E-35 T 09-03-2017 BV404_RS13565 48555971f7e5a1503b2adbcbfc6166f5 263 Pfam PF00535 Glycosyl transferase family 2 10 116 2.7E-15 T 09-03-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BV404_RS13565 48555971f7e5a1503b2adbcbfc6166f5 263 SUPERFAMILY SSF53448 3 143 3.75E-23 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases BV404_RS13565 48555971f7e5a1503b2adbcbfc6166f5 263 Gene3D G3DSA:3.90.550.10 4 128 2.0E-13 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases BV404_RS04640 a5f166c3e71b2cc39ad8f336112215c4 128 Gene3D G3DSA:1.20.120.340 8 123 4.3E-36 T 09-03-2017 IPR003713 Flagellar protein FliS GO:0044780 BV404_RS04640 a5f166c3e71b2cc39ad8f336112215c4 128 Pfam PF02561 Flagellar protein FliS 7 122 2.7E-33 T 09-03-2017 IPR003713 Flagellar protein FliS GO:0044780 BV404_RS04640 a5f166c3e71b2cc39ad8f336112215c4 128 PIRSF PIRSF039090 1 127 9.8E-39 T 09-03-2017 IPR003713 Flagellar protein FliS GO:0044780 BV404_RS04640 a5f166c3e71b2cc39ad8f336112215c4 128 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 123 2.1E-25 T 09-03-2017 IPR003713 Flagellar protein FliS GO:0044780 BV404_RS04640 a5f166c3e71b2cc39ad8f336112215c4 128 SUPERFAMILY SSF101116 9 124 3.79E-34 T 09-03-2017 IPR003713 Flagellar protein FliS GO:0044780 BV404_RS11210 7851d2f58e959d8d7abc2f53d1fbef46 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 253 285 4.2E-13 T 09-03-2017 IPR001451 Hexapeptide repeat BV404_RS11210 7851d2f58e959d8d7abc2f53d1fbef46 343 Gene3D G3DSA:2.160.10.10 173 340 5.5E-34 T 09-03-2017 BV404_RS11210 7851d2f58e959d8d7abc2f53d1fbef46 343 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 2 340 46.18 T 09-03-2017 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117 BV404_RS11210 7851d2f58e959d8d7abc2f53d1fbef46 343 SUPERFAMILY SSF51161 90 323 4.16E-35 T 09-03-2017 IPR011004 Trimeric LpxA-like BV404_RS11210 7851d2f58e959d8d7abc2f53d1fbef46 343 Gene3D G3DSA:3.30.60.70 131 171 2.7E-22 T 09-03-2017 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 BV404_RS11210 7851d2f58e959d8d7abc2f53d1fbef46 343 TIGRFAM TIGR03536 DapD_gpp: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 343 2.7E-177 T 09-03-2017 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria KEGG: 00300+2.3.1.117 BV404_RS11210 7851d2f58e959d8d7abc2f53d1fbef46 343 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 131 171 1.9E-16 T 09-03-2017 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 BV404_RS00570 eff75784a29376bb870c40c66bea83a3 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 185 329 5.3E-42 T 09-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 BV404_RS00570 eff75784a29376bb870c40c66bea83a3 443 Gene3D G3DSA:1.10.8.10 213 243 1.7E-35 T 09-03-2017 BV404_RS00570 eff75784a29376bb870c40c66bea83a3 443 Gene3D G3DSA:1.10.8.10 111 177 1.7E-35 T 09-03-2017 BV404_RS00570 eff75784a29376bb870c40c66bea83a3 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 443 43.258 T 09-03-2017 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 BV404_RS00570 eff75784a29376bb870c40c66bea83a3 443 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 335 404 1.4E-5 T 09-03-2017 IPR019489 Clp ATPase, C-terminal BV404_RS00570 eff75784a29376bb870c40c66bea83a3 443 SMART SM01086 335 434 4.1E-20 T 09-03-2017 IPR019489 Clp ATPase, C-terminal BV404_RS00570 eff75784a29376bb870c40c66bea83a3 443 Gene3D G3DSA:3.40.50.300 3 110 6.1E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS00570 eff75784a29376bb870c40c66bea83a3 443 Gene3D G3DSA:3.40.50.300 245 331 6.1E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS00570 eff75784a29376bb870c40c66bea83a3 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 443 6.1E-223 T 09-03-2017 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 BV404_RS00570 eff75784a29376bb870c40c66bea83a3 443 SUPERFAMILY SSF52540 3 441 5.65E-96 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS00570 eff75784a29376bb870c40c66bea83a3 443 Gene3D G3DSA:1.10.8.60 335 443 1.2E-35 T 09-03-2017 BV404_RS00570 eff75784a29376bb870c40c66bea83a3 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 103 9.5E-7 T 09-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 BV404_RS00570 eff75784a29376bb870c40c66bea83a3 443 SMART SM00382 49 332 7.1E-13 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS22780 3c2bc6ecc2333aa82f16d2660cb5b0cb 112 Pfam PF17203 Single cache domain 3 7 104 1.3E-18 T 09-03-2017 IPR033463 Single cache domain 3 BV404_RS22780 3c2bc6ecc2333aa82f16d2660cb5b0cb 112 Gene3D G3DSA:3.30.450.20 3 107 4.5E-37 T 09-03-2017 BV404_RS22780 3c2bc6ecc2333aa82f16d2660cb5b0cb 112 SUPERFAMILY SSF103190 2 105 1.18E-30 T 09-03-2017 IPR029151 Periplasmic sensor domain-like BV404_RS12830 66225fff158e8bb68bbbfabf2864359f 149 Gene3D G3DSA:3.10.430.100 61 149 5.2E-28 T 09-03-2017 IPR020069 Ribosomal protein L9, C-terminal BV404_RS12830 66225fff158e8bb68bbbfabf2864359f 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 25.823 T 09-03-2017 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS12830 66225fff158e8bb68bbbfabf2864359f 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 7.2E-25 T 09-03-2017 IPR020069 Ribosomal protein L9, C-terminal BV404_RS12830 66225fff158e8bb68bbbfabf2864359f 149 SUPERFAMILY SSF55658 1 57 6.98E-19 T 09-03-2017 IPR009027 Ribosomal protein L9/RNase H1, N-terminal BV404_RS12830 66225fff158e8bb68bbbfabf2864359f 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 4.5E-55 T 09-03-2017 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS12830 66225fff158e8bb68bbbfabf2864359f 149 Gene3D G3DSA:3.40.5.10 1 52 7.3E-25 T 09-03-2017 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS12830 66225fff158e8bb68bbbfabf2864359f 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 09-03-2017 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS12830 66225fff158e8bb68bbbfabf2864359f 149 SUPERFAMILY SSF55653 60 149 2.49E-25 T 09-03-2017 IPR020069 Ribosomal protein L9, C-terminal BV404_RS12830 66225fff158e8bb68bbbfabf2864359f 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 1.8E-21 T 09-03-2017 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS00425 609b8cb59b163b618aa1268f45d30199 336 SUPERFAMILY SSF53671 4 335 1.57E-99 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BV404_RS00425 609b8cb59b163b618aa1268f45d30199 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 4.0E-32 T 09-03-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BV404_RS00425 609b8cb59b163b618aa1268f45d30199 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 230 240 4.0E-32 T 09-03-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BV404_RS00425 609b8cb59b163b618aa1268f45d30199 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 4.0E-32 T 09-03-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BV404_RS00425 609b8cb59b163b618aa1268f45d30199 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 4.0E-32 T 09-03-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BV404_RS00425 609b8cb59b163b618aa1268f45d30199 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 313 324 4.0E-32 T 09-03-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BV404_RS00425 609b8cb59b163b618aa1268f45d30199 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 5.6E-24 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BV404_RS00425 609b8cb59b163b618aa1268f45d30199 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 5.6E-24 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BV404_RS00425 609b8cb59b163b618aa1268f45d30199 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 299 322 5.6E-24 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BV404_RS00425 609b8cb59b163b618aa1268f45d30199 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 5.6E-24 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BV404_RS00425 609b8cb59b163b618aa1268f45d30199 336 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 334 6.4E-132 T 09-03-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BV404_RS00425 609b8cb59b163b618aa1268f45d30199 336 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 335 82.805 T 09-03-2017 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 BV404_RS00425 609b8cb59b163b618aa1268f45d30199 336 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BV404_RS00425 609b8cb59b163b618aa1268f45d30199 336 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 157 332 3.2E-55 T 09-03-2017 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 BV404_RS00425 609b8cb59b163b618aa1268f45d30199 336 Gene3D G3DSA:3.40.50.1370 5 144 1.4E-55 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BV404_RS00425 609b8cb59b163b618aa1268f45d30199 336 Gene3D G3DSA:3.40.50.1370 145 321 1.6E-71 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BV404_RS00425 609b8cb59b163b618aa1268f45d30199 336 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 9.9E-46 T 09-03-2017 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 BV404_RS00365 161d00b434ddd2a2642925826602f7f4 706 Gene3D G3DSA:3.10.20.30 388 448 6.8E-21 T 09-03-2017 IPR012675 Beta-grasp domain BV404_RS00365 161d00b434ddd2a2642925826602f7f4 706 SUPERFAMILY SSF55021 631 703 1.34E-8 T 09-03-2017 BV404_RS00365 161d00b434ddd2a2642925826602f7f4 706 SUPERFAMILY SSF109604 3 190 1.29E-73 T 09-03-2017 BV404_RS00365 161d00b434ddd2a2642925826602f7f4 706 Gene3D G3DSA:3.30.70.260 630 697 1.2E-10 T 09-03-2017 BV404_RS00365 161d00b434ddd2a2642925826602f7f4 706 Pfam PF02824 TGS domain 389 447 3.9E-20 T 09-03-2017 IPR004095 TGS KEGG: 00970+6.1.1.3 BV404_RS00365 161d00b434ddd2a2642925826602f7f4 706 SMART SM00954 235 345 8.5E-59 T 09-03-2017 IPR007685 RelA/SpoT GO:0015969 BV404_RS00365 161d00b434ddd2a2642925826602f7f4 706 Pfam PF13291 ACT domain 627 703 2.1E-16 T 09-03-2017 IPR002912 ACT domain GO:0008152|GO:0016597 BV404_RS00365 161d00b434ddd2a2642925826602f7f4 706 SUPERFAMILY SSF81301 180 393 2.78E-59 T 09-03-2017 BV404_RS00365 161d00b434ddd2a2642925826602f7f4 706 SUPERFAMILY SSF81271 376 448 4.91E-21 T 09-03-2017 IPR012676 TGS-like KEGG: 00970+6.1.1.3 BV404_RS00365 161d00b434ddd2a2642925826602f7f4 706 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 8.9E-35 T 09-03-2017 IPR007685 RelA/SpoT GO:0015969 BV404_RS00365 161d00b434ddd2a2642925826602f7f4 706 SMART SM00471 41 153 5.2E-10 T 09-03-2017 IPR003607 HD/PDEase domain BV404_RS00365 161d00b434ddd2a2642925826602f7f4 706 Pfam PF13328 HD domain 28 175 1.1E-52 T 09-03-2017 IPR003607 HD/PDEase domain BV404_RS00365 161d00b434ddd2a2642925826602f7f4 706 Gene3D G3DSA:3.30.460.10 178 324 4.0E-46 T 09-03-2017 BV404_RS00365 161d00b434ddd2a2642925826602f7f4 706 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 27 703 4.6E-271 T 09-03-2017 IPR004811 RelA/SpoT family GO:0015969 BV404_RS01975 28c03f452e24759af0fea95775f1c175 475 SUPERFAMILY SSF55424 343 466 6.36E-39 T 09-03-2017 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 BV404_RS01975 28c03f452e24759af0fea95775f1c175 475 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 8 460 1.7E-149 T 09-03-2017 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 BV404_RS01975 28c03f452e24759af0fea95775f1c175 475 Gene3D G3DSA:3.50.50.60 6 149 7.1E-67 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS01975 28c03f452e24759af0fea95775f1c175 475 Gene3D G3DSA:3.50.50.60 272 335 7.1E-67 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS01975 28c03f452e24759af0fea95775f1c175 475 PIRSF PIRSF000350 1 469 4.2E-83 T 09-03-2017 BV404_RS01975 28c03f452e24759af0fea95775f1c175 475 Gene3D G3DSA:3.50.50.60 152 271 1.2E-34 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS01975 28c03f452e24759af0fea95775f1c175 475 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 5.4E-63 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS01975 28c03f452e24759af0fea95775f1c175 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 8.6E-41 T 09-03-2017 BV404_RS01975 28c03f452e24759af0fea95775f1c175 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 8.6E-41 T 09-03-2017 BV404_RS01975 28c03f452e24759af0fea95775f1c175 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 8.6E-41 T 09-03-2017 BV404_RS01975 28c03f452e24759af0fea95775f1c175 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 8.6E-41 T 09-03-2017 BV404_RS01975 28c03f452e24759af0fea95775f1c175 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 8.6E-41 T 09-03-2017 BV404_RS01975 28c03f452e24759af0fea95775f1c175 475 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 3.2E-35 T 09-03-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 BV404_RS01975 28c03f452e24759af0fea95775f1c175 475 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 09-03-2017 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 BV404_RS01975 28c03f452e24759af0fea95775f1c175 475 Gene3D G3DSA:3.30.390.30 336 462 1.3E-44 T 09-03-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 BV404_RS01975 28c03f452e24759af0fea95775f1c175 475 SUPERFAMILY SSF51905 1 322 1.81E-58 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS01975 28c03f452e24759af0fea95775f1c175 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 4.1E-68 T 09-03-2017 BV404_RS01975 28c03f452e24759af0fea95775f1c175 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 4.1E-68 T 09-03-2017 BV404_RS01975 28c03f452e24759af0fea95775f1c175 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 4.1E-68 T 09-03-2017 BV404_RS01975 28c03f452e24759af0fea95775f1c175 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 4.1E-68 T 09-03-2017 BV404_RS01975 28c03f452e24759af0fea95775f1c175 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 4.1E-68 T 09-03-2017 BV404_RS01975 28c03f452e24759af0fea95775f1c175 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 4.1E-68 T 09-03-2017 BV404_RS01975 28c03f452e24759af0fea95775f1c175 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 4.1E-68 T 09-03-2017 BV404_RS01975 28c03f452e24759af0fea95775f1c175 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 4.1E-68 T 09-03-2017 BV404_RS01975 28c03f452e24759af0fea95775f1c175 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 4.1E-68 T 09-03-2017 BV404_RS08155 2d0be8c45f9b39e07f0042383c00a74b 188 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 188 5.9E-96 T 09-03-2017 IPR011897 Translation elongation factor P-like, YeiP BV404_RS08155 2d0be8c45f9b39e07f0042383c00a74b 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 124 7.3E-15 T 09-03-2017 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 BV404_RS08155 2d0be8c45f9b39e07f0042383c00a74b 188 Gene3D G3DSA:2.40.50.140 131 188 4.4E-21 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS08155 2d0be8c45f9b39e07f0042383c00a74b 188 PIRSF PIRSF005901 1 188 1.1E-59 T 09-03-2017 IPR020599 Translation elongation factor P/YeiP BV404_RS08155 2d0be8c45f9b39e07f0042383c00a74b 188 Gene3D G3DSA:2.40.50.140 67 129 1.2E-16 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS08155 2d0be8c45f9b39e07f0042383c00a74b 188 SUPERFAMILY SSF50104 1 65 1.14E-10 T 09-03-2017 IPR008991 Translation protein SH3-like domain BV404_RS08155 2d0be8c45f9b39e07f0042383c00a74b 188 Gene3D G3DSA:2.30.30.30 1 64 3.1E-12 T 09-03-2017 IPR014722 Ribosomal protein L2 domain 2 BV404_RS08155 2d0be8c45f9b39e07f0042383c00a74b 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 4.6E-15 T 09-03-2017 IPR013185 Translation elongation factor, KOW-like BV404_RS08155 2d0be8c45f9b39e07f0042383c00a74b 188 ProSitePatterns PS01275 Elongation factor P signature. 153 172 - T 09-03-2017 IPR013852 Translation elongation factor P/YeiP, conserved site BV404_RS08155 2d0be8c45f9b39e07f0042383c00a74b 188 SUPERFAMILY SSF50249 132 188 6.0E-14 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS08155 2d0be8c45f9b39e07f0042383c00a74b 188 Pfam PF09285 Elongation factor P, C-terminal 132 187 3.2E-18 T 09-03-2017 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 BV404_RS08155 2d0be8c45f9b39e07f0042383c00a74b 188 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 188 46.61 T 09-03-2017 IPR011897 Translation elongation factor P-like, YeiP BV404_RS08155 2d0be8c45f9b39e07f0042383c00a74b 188 SUPERFAMILY SSF50249 67 129 2.7E-13 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS08155 2d0be8c45f9b39e07f0042383c00a74b 188 SMART SM00841 132 187 8.4E-25 T 09-03-2017 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 BV404_RS08155 2d0be8c45f9b39e07f0042383c00a74b 188 SMART SM01185 69 124 8.2E-16 T 09-03-2017 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 BV404_RS05005 cbae64a4feb976a8262d91937aee2d50 1030 Gene3D G3DSA:3.40.50.740 619 688 2.1E-29 T 09-03-2017 BV404_RS05005 cbae64a4feb976a8262d91937aee2d50 1030 Gene3D G3DSA:3.40.50.740 159 264 2.1E-29 T 09-03-2017 BV404_RS05005 cbae64a4feb976a8262d91937aee2d50 1030 Gene3D G3DSA:3.40.50.740 720 739 2.1E-29 T 09-03-2017 BV404_RS05005 cbae64a4feb976a8262d91937aee2d50 1030 Pfam PF00384 Molybdopterin oxidoreductase 244 693 9.3E-22 T 09-03-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BV404_RS05005 cbae64a4feb976a8262d91937aee2d50 1030 Gene3D G3DSA:2.20.25.90 71 158 1.7E-12 T 09-03-2017 BV404_RS05005 cbae64a4feb976a8262d91937aee2d50 1030 SUPERFAMILY SSF53706 69 111 5.32E-118 T 09-03-2017 BV404_RS05005 cbae64a4feb976a8262d91937aee2d50 1030 SUPERFAMILY SSF53706 138 900 5.32E-118 T 09-03-2017 BV404_RS05005 cbae64a4feb976a8262d91937aee2d50 1030 SMART SM00926 72 154 1.0E-12 T 09-03-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BV404_RS05005 cbae64a4feb976a8262d91937aee2d50 1030 Pfam PF01568 Molydopterin dinucleotide binding domain 898 997 7.0E-13 T 09-03-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 BV404_RS05005 cbae64a4feb976a8262d91937aee2d50 1030 SUPERFAMILY SSF50692 881 1007 8.36E-25 T 09-03-2017 IPR009010 Aspartate decarboxylase-like domain BV404_RS05005 cbae64a4feb976a8262d91937aee2d50 1030 Gene3D G3DSA:2.40.40.20 863 1030 8.8E-28 T 09-03-2017 BV404_RS05005 cbae64a4feb976a8262d91937aee2d50 1030 Gene3D G3DSA:3.40.228.10 265 379 2.9E-42 T 09-03-2017 BV404_RS05005 cbae64a4feb976a8262d91937aee2d50 1030 Gene3D G3DSA:3.40.228.10 469 569 2.9E-42 T 09-03-2017 BV404_RS09795 d92c63f98adf92f1e6fc99612f77384d 199 Gene3D G3DSA:1.10.1060.10 47 119 2.3E-5 T 09-03-2017 BV404_RS09795 d92c63f98adf92f1e6fc99612f77384d 199 Hamap MF_00463 Electron transport complex subunit RsxB [rsxB]. 4 182 42.687 T 09-03-2017 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 BV404_RS09795 d92c63f98adf92f1e6fc99612f77384d 199 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 144 155 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BV404_RS09795 d92c63f98adf92f1e6fc99612f77384d 199 SUPERFAMILY SSF54862 37 173 1.13E-31 T 09-03-2017 BV404_RS09795 d92c63f98adf92f1e6fc99612f77384d 199 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 1 186 2.8E-87 T 09-03-2017 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 BV404_RS09795 d92c63f98adf92f1e6fc99612f77384d 199 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 114 125 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BV404_RS09795 d92c63f98adf92f1e6fc99612f77384d 199 PIRSF PIRSF005784 3 188 1.4E-86 T 09-03-2017 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 BV404_RS09795 d92c63f98adf92f1e6fc99612f77384d 199 Gene3D G3DSA:3.30.70.20 120 176 2.6E-17 T 09-03-2017 BV404_RS09795 d92c63f98adf92f1e6fc99612f77384d 199 Pfam PF14697 4Fe-4S dicluster domain 107 161 6.4E-18 T 09-03-2017 BV404_RS09795 d92c63f98adf92f1e6fc99612f77384d 199 Pfam PF04060 Putative Fe-S cluster 44 75 9.1E-15 T 09-03-2017 IPR007202 4Fe-4S domain GO:0051536 BV404_RS11560 b523398c8206b9b41a32a797ad60baa4 231 Gene3D G3DSA:3.40.50.1580 1 230 3.8E-81 T 09-03-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 BV404_RS11560 b523398c8206b9b41a32a797ad60baa4 231 SUPERFAMILY SSF53167 1 230 7.59E-74 T 09-03-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 BV404_RS11560 b523398c8206b9b41a32a797ad60baa4 231 Pfam PF01048 Phosphorylase superfamily 2 227 1.2E-49 T 09-03-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 BV404_RS11560 b523398c8206b9b41a32a797ad60baa4 231 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 228 4.1E-101 T 09-03-2017 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BV404_RS11560 b523398c8206b9b41a32a797ad60baa4 231 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 230 48.002 T 09-03-2017 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BV404_RS08140 6d7a05f7aa2492bfad587f5d9c602406 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 415 428 1.6E-10 T 09-03-2017 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS08140 6d7a05f7aa2492bfad587f5d9c602406 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 544 552 1.6E-10 T 09-03-2017 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS08140 6d7a05f7aa2492bfad587f5d9c602406 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 492 504 1.6E-10 T 09-03-2017 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS08140 6d7a05f7aa2492bfad587f5d9c602406 787 SUPERFAMILY SSF53098 4 389 1.17E-89 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 BV404_RS08140 6d7a05f7aa2492bfad587f5d9c602406 787 Pfam PF03104 DNA polymerase family B, exonuclease domain 197 296 7.7E-15 T 09-03-2017 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS08140 6d7a05f7aa2492bfad587f5d9c602406 787 Gene3D G3DSA:3.30.420.10 153 366 5.3E-40 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 BV404_RS08140 6d7a05f7aa2492bfad587f5d9c602406 787 SMART SM00486 153 558 1.7E-64 T 09-03-2017 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS08140 6d7a05f7aa2492bfad587f5d9c602406 787 SUPERFAMILY SSF56672 385 780 3.78E-113 T 09-03-2017 BV404_RS08140 6d7a05f7aa2492bfad587f5d9c602406 787 Gene3D G3DSA:3.90.1600.10 515 628 1.4E-10 T 09-03-2017 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS08140 6d7a05f7aa2492bfad587f5d9c602406 787 Gene3D G3DSA:3.90.1600.10 401 431 1.4E-10 T 09-03-2017 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS08140 6d7a05f7aa2492bfad587f5d9c602406 787 Pfam PF00136 DNA polymerase family B 376 738 5.2E-41 T 09-03-2017 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS08140 6d7a05f7aa2492bfad587f5d9c602406 787 ProSitePatterns PS00116 DNA polymerase family B signature. 546 554 - T 09-03-2017 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS03925 f1135b9205894ce0d8681e6546911d32 376 Pfam PF00072 Response regulator receiver domain 5 109 5.4E-24 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS03925 f1135b9205894ce0d8681e6546911d32 376 SMART SM00448 3 122 1.8E-26 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS03925 f1135b9205894ce0d8681e6546911d32 376 SUPERFAMILY SSF52738 185 370 2.88E-63 T 09-03-2017 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 BV404_RS03925 f1135b9205894ce0d8681e6546911d32 376 PIRSF PIRSF000876 1 374 1.1E-127 T 09-03-2017 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 BV404_RS03925 f1135b9205894ce0d8681e6546911d32 376 Gene3D G3DSA:3.40.50.180 183 370 8.5E-73 T 09-03-2017 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 BV404_RS03925 f1135b9205894ce0d8681e6546911d32 376 Gene3D G3DSA:3.40.50.2300 2 109 4.2E-31 T 09-03-2017 BV404_RS03925 f1135b9205894ce0d8681e6546911d32 376 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 374 39.178 T 09-03-2017 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 BV404_RS03925 f1135b9205894ce0d8681e6546911d32 376 SUPERFAMILY SSF52172 2 109 4.41E-27 T 09-03-2017 IPR011006 CheY-like superfamily BV404_RS03925 f1135b9205894ce0d8681e6546911d32 376 Pfam PF01339 CheB methylesterase 191 368 2.4E-58 T 09-03-2017 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 BV404_RS05085 972436aeb09c3bca64d6c5a703a68318 396 Gene3D G3DSA:1.20.1250.20 16 197 3.4E-26 T 09-03-2017 BV404_RS05085 972436aeb09c3bca64d6c5a703a68318 396 SUPERFAMILY SSF103473 12 391 7.46E-53 T 09-03-2017 IPR020846 Major facilitator superfamily domain BV404_RS05085 972436aeb09c3bca64d6c5a703a68318 396 Gene3D G3DSA:1.20.1250.20 209 391 2.2E-16 T 09-03-2017 BV404_RS05085 972436aeb09c3bca64d6c5a703a68318 396 Pfam PF07690 Major Facilitator Superfamily 25 322 7.5E-31 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BV404_RS06395 02f40f5d36e567b793992d68b7b070dc 760 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 09-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BV404_RS06395 02f40f5d36e567b793992d68b7b070dc 760 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 4.7E-176 T 09-03-2017 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BV404_RS06395 02f40f5d36e567b793992d68b7b070dc 760 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 664 1.9E-115 T 09-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BV404_RS06395 02f40f5d36e567b793992d68b7b070dc 760 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 142 219 3.5E-11 T 09-03-2017 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BV404_RS06395 02f40f5d36e567b793992d68b7b070dc 760 Pfam PF03477 ATP cone domain 6 92 9.9E-19 T 09-03-2017 IPR005144 ATP-cone domain Reactome: R-HSA-499943 BV404_RS06395 02f40f5d36e567b793992d68b7b070dc 760 Gene3D G3DSA:3.20.70.20 398 559 6.9E-43 T 09-03-2017 BV404_RS06395 02f40f5d36e567b793992d68b7b070dc 760 Gene3D G3DSA:3.20.70.20 610 704 6.9E-43 T 09-03-2017 BV404_RS06395 02f40f5d36e567b793992d68b7b070dc 760 Gene3D G3DSA:3.20.70.20 139 344 6.9E-43 T 09-03-2017 BV404_RS06395 02f40f5d36e567b793992d68b7b070dc 760 SUPERFAMILY SSF48168 10 221 2.35E-74 T 09-03-2017 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BV404_RS06395 02f40f5d36e567b793992d68b7b070dc 760 SUPERFAMILY SSF51998 222 738 6.41E-167 T 09-03-2017 BV404_RS06395 02f40f5d36e567b793992d68b7b070dc 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 3.4E-37 T 09-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BV404_RS06395 02f40f5d36e567b793992d68b7b070dc 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 3.4E-37 T 09-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BV404_RS06395 02f40f5d36e567b793992d68b7b070dc 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 3.4E-37 T 09-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BV404_RS06395 02f40f5d36e567b793992d68b7b070dc 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 3.4E-37 T 09-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BV404_RS06395 02f40f5d36e567b793992d68b7b070dc 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 3.4E-37 T 09-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BV404_RS06395 02f40f5d36e567b793992d68b7b070dc 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 3.4E-37 T 09-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BV404_RS01800 bb065709c308bde13d747cc87e137121 433 PIRSF PIRSF001400 1 431 1.3E-190 T 09-03-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BV404_RS01800 bb065709c308bde13d747cc87e137121 433 Hamap MF_00318 Enolase [eno]. 2 417 44.117 T 09-03-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BV404_RS01800 bb065709c308bde13d747cc87e137121 433 SMART SM01193 4 134 1.8E-91 T 09-03-2017 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BV404_RS01800 bb065709c308bde13d747cc87e137121 433 SUPERFAMILY SSF54826 3 138 1.19E-55 T 09-03-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BV404_RS01800 bb065709c308bde13d747cc87e137121 433 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 429 1.5E-206 T 09-03-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BV404_RS01800 bb065709c308bde13d747cc87e137121 433 Pfam PF03952 Enolase, N-terminal domain 4 134 1.8E-57 T 09-03-2017 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BV404_RS01800 bb065709c308bde13d747cc87e137121 433 Gene3D G3DSA:3.20.20.120 128 429 1.1E-135 T 09-03-2017 IPR029065 Enolase C-terminal domain-like BV404_RS01800 bb065709c308bde13d747cc87e137121 433 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 430 5.9E-137 T 09-03-2017 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BV404_RS01800 bb065709c308bde13d747cc87e137121 433 PRINTS PR00148 Enolase signature 369 386 4.0E-44 T 09-03-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BV404_RS01800 bb065709c308bde13d747cc87e137121 433 PRINTS PR00148 Enolase signature 317 328 4.0E-44 T 09-03-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BV404_RS01800 bb065709c308bde13d747cc87e137121 433 PRINTS PR00148 Enolase signature 165 178 4.0E-44 T 09-03-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BV404_RS01800 bb065709c308bde13d747cc87e137121 433 PRINTS PR00148 Enolase signature 340 354 4.0E-44 T 09-03-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BV404_RS01800 bb065709c308bde13d747cc87e137121 433 PRINTS PR00148 Enolase signature 37 51 4.0E-44 T 09-03-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BV404_RS01800 bb065709c308bde13d747cc87e137121 433 PRINTS PR00148 Enolase signature 107 123 4.0E-44 T 09-03-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BV404_RS01800 bb065709c308bde13d747cc87e137121 433 SUPERFAMILY SSF51604 143 428 1.34E-125 T 09-03-2017 IPR029065 Enolase C-terminal domain-like BV404_RS01800 bb065709c308bde13d747cc87e137121 433 SMART SM01192 143 431 4.3E-212 T 09-03-2017 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BV404_RS01800 bb065709c308bde13d747cc87e137121 433 Gene3D G3DSA:3.30.390.10 3 126 8.7E-54 T 09-03-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BV404_RS01800 bb065709c308bde13d747cc87e137121 433 ProSitePatterns PS00164 Enolase signature. 340 353 - T 09-03-2017 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS06590 30254528f2427d193572f4f69826d2c9 455 SUPERFAMILY SSF56322 11 454 9.29E-145 T 09-03-2017 IPR005801 ADC synthase GO:0009058 BV404_RS06590 30254528f2427d193572f4f69826d2c9 455 Pfam PF00425 chorismate binding enzyme 193 445 8.1E-97 T 09-03-2017 IPR015890 Chorismate-utilising enzyme, C-terminal BV404_RS06590 30254528f2427d193572f4f69826d2c9 455 PRINTS PR00095 Anthranilate synthase component I signature 402 416 4.6E-18 T 09-03-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BV404_RS06590 30254528f2427d193572f4f69826d2c9 455 PRINTS PR00095 Anthranilate synthase component I signature 307 320 4.6E-18 T 09-03-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BV404_RS06590 30254528f2427d193572f4f69826d2c9 455 PRINTS PR00095 Anthranilate synthase component I signature 387 401 4.6E-18 T 09-03-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BV404_RS06590 30254528f2427d193572f4f69826d2c9 455 PRINTS PR00095 Anthranilate synthase component I signature 293 306 4.6E-18 T 09-03-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BV404_RS06590 30254528f2427d193572f4f69826d2c9 455 Gene3D G3DSA:3.60.120.10 14 454 2.0E-151 T 09-03-2017 IPR005801 ADC synthase GO:0009058 BV404_RS06590 30254528f2427d193572f4f69826d2c9 455 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 109 447 3.6E-120 T 09-03-2017 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 BV404_RS06590 30254528f2427d193572f4f69826d2c9 455 Pfam PF04715 Anthranilate synthase component I, N terminal region 23 154 2.5E-27 T 09-03-2017 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BV404_RS07760 eb8a9d6e02852b2e0eb08036dde06f78 70 PRINTS PR00050 Cold shock protein signature 7 22 3.7E-17 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BV404_RS07760 eb8a9d6e02852b2e0eb08036dde06f78 70 PRINTS PR00050 Cold shock protein signature 28 37 3.7E-17 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BV404_RS07760 eb8a9d6e02852b2e0eb08036dde06f78 70 PRINTS PR00050 Cold shock protein signature 43 61 3.7E-17 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BV404_RS07760 eb8a9d6e02852b2e0eb08036dde06f78 70 Gene3D G3DSA:2.40.50.140 5 68 6.6E-32 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS07760 eb8a9d6e02852b2e0eb08036dde06f78 70 Pfam PF00313 'Cold-shock' DNA-binding domain 6 69 5.0E-31 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BV404_RS07760 eb8a9d6e02852b2e0eb08036dde06f78 70 PIRSF PIRSF002599 1 70 1.6E-26 T 09-03-2017 IPR012156 Cold shock, CspA GO:0003676 BV404_RS07760 eb8a9d6e02852b2e0eb08036dde06f78 70 SUPERFAMILY SSF50249 4 68 6.86E-26 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS07760 eb8a9d6e02852b2e0eb08036dde06f78 70 SMART SM00357 6 70 5.0E-31 T 09-03-2017 IPR011129 Cold shock protein GO:0003676 BV404_RS02120 a52bf264d73f78bd56d917f03e8a0e04 327 SUPERFAMILY SSF52540 5 252 1.16E-64 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS02120 a52bf264d73f78bd56d917f03e8a0e04 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 1.1E-17 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BV404_RS02120 a52bf264d73f78bd56d917f03e8a0e04 327 Pfam PF00005 ABC transporter 26 181 4.0E-28 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS02120 a52bf264d73f78bd56d917f03e8a0e04 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 317 3.3E-22 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BV404_RS02120 a52bf264d73f78bd56d917f03e8a0e04 327 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS02120 a52bf264d73f78bd56d917f03e8a0e04 327 Gene3D G3DSA:3.40.50.300 4 253 4.0E-71 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS02120 a52bf264d73f78bd56d917f03e8a0e04 327 SMART SM00382 34 231 1.2E-13 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS02560 5c4da9fda8d6e0ce6c4e2546ee2c4050 109 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 100 5.9E-31 T 09-03-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 BV404_RS02560 5c4da9fda8d6e0ce6c4e2546ee2c4050 109 SUPERFAMILY SSF69754 1 103 9.81E-30 T 09-03-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 BV404_RS02560 5c4da9fda8d6e0ce6c4e2546ee2c4050 109 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 92 3.7E-23 T 09-03-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 BV404_RS02560 5c4da9fda8d6e0ce6c4e2546ee2c4050 109 Gene3D G3DSA:3.30.160.100 2 92 2.8E-30 T 09-03-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 BV404_RS10620 034e8b87d1d3cadb68c021a7b7c42573 177 SUPERFAMILY SSF55729 3 149 1.77E-23 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS10620 034e8b87d1d3cadb68c021a7b7c42573 177 Pfam PF13302 Acetyltransferase (GNAT) domain 30 141 1.9E-16 T 09-03-2017 IPR000182 GNAT domain GO:0008080 BV404_RS10620 034e8b87d1d3cadb68c021a7b7c42573 177 Gene3D G3DSA:3.40.630.30 3 162 1.1E-24 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS00200 009c58fe212497a7b262fb68fdddeed5 291 Gene3D G3DSA:3.90.1280.10 225 282 5.1E-23 T 09-03-2017 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 BV404_RS00200 009c58fe212497a7b262fb68fdddeed5 291 Gene3D G3DSA:3.55.30.10 3 175 1.2E-65 T 09-03-2017 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 BV404_RS00200 009c58fe212497a7b262fb68fdddeed5 291 SUPERFAMILY SSF118352 223 281 1.26E-18 T 09-03-2017 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 BV404_RS00200 009c58fe212497a7b262fb68fdddeed5 291 Hamap MF_00117 33 kDa chaperonin [hslO]. 3 283 32.443 T 09-03-2017 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 BV404_RS00200 009c58fe212497a7b262fb68fdddeed5 291 Pfam PF01430 Hsp33 protein 5 272 1.9E-82 T 09-03-2017 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 BV404_RS00200 009c58fe212497a7b262fb68fdddeed5 291 Gene3D G3DSA:1.10.287.480 176 224 4.8E-26 T 09-03-2017 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain BV404_RS00200 009c58fe212497a7b262fb68fdddeed5 291 PIRSF PIRSF005261 1 284 2.1E-72 T 09-03-2017 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 BV404_RS00200 009c58fe212497a7b262fb68fdddeed5 291 SUPERFAMILY SSF64397 4 231 1.83E-77 T 09-03-2017 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 BV404_RS08280 4c425b507ec33620e1b55e1451bce189 184 SUPERFAMILY SSF47413 4 70 3.49E-19 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 BV404_RS08280 4c425b507ec33620e1b55e1451bce189 184 Gene3D G3DSA:1.10.260.40 4 69 2.0E-23 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 BV404_RS08280 4c425b507ec33620e1b55e1451bce189 184 Pfam PF01381 Helix-turn-helix 10 64 2.4E-17 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BV404_RS08280 4c425b507ec33620e1b55e1451bce189 184 Gene3D G3DSA:2.60.120.10 74 182 9.0E-22 T 09-03-2017 IPR014710 RmlC-like jelly roll fold BV404_RS08280 4c425b507ec33620e1b55e1451bce189 184 Pfam PF07883 Cupin domain 110 177 1.1E-15 T 09-03-2017 IPR013096 Cupin 2, conserved barrel BV404_RS08280 4c425b507ec33620e1b55e1451bce189 184 SMART SM00530 9 64 8.0E-17 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BV404_RS08280 4c425b507ec33620e1b55e1451bce189 184 SUPERFAMILY SSF51182 49 183 1.71E-25 T 09-03-2017 IPR011051 RmlC-like cupin domain BV404_RS14225 0a12e76db9c5d457610976bae3206965 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 4.3E-28 T 09-03-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 BV404_RS14225 0a12e76db9c5d457610976bae3206965 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 4.3E-28 T 09-03-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 BV404_RS14225 0a12e76db9c5d457610976bae3206965 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 4.3E-28 T 09-03-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 BV404_RS14225 0a12e76db9c5d457610976bae3206965 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 4.3E-28 T 09-03-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 BV404_RS14225 0a12e76db9c5d457610976bae3206965 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 4.3E-28 T 09-03-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 BV404_RS14225 0a12e76db9c5d457610976bae3206965 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 19.18 T 09-03-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 BV404_RS14225 0a12e76db9c5d457610976bae3206965 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 09-03-2017 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210 BV404_RS14225 0a12e76db9c5d457610976bae3206965 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 4.9E-53 T 09-03-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 BV404_RS14225 0a12e76db9c5d457610976bae3206965 177 Gene3D G3DSA:1.10.520.20 3 105 3.6E-35 T 09-03-2017 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210 BV404_RS14225 0a12e76db9c5d457610976bae3206965 177 SUPERFAMILY SSF47928 4 105 2.48E-27 T 09-03-2017 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210 BV404_RS14225 0a12e76db9c5d457610976bae3206965 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 3.7E-62 T 09-03-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 BV404_RS11365 bb465fc6e1b419591fb67e1ef62d622c 695 Pfam PF14492 Elongation Factor G, domain II 401 474 3.2E-29 T 09-03-2017 IPR009022 Elongation factor G, III-V domain BV404_RS11365 bb465fc6e1b419591fb67e1ef62d622c 695 Gene3D G3DSA:2.40.30.10 303 402 4.9E-35 T 09-03-2017 BV404_RS11365 bb465fc6e1b419591fb67e1ef62d622c 695 SUPERFAMILY SSF54211 476 595 1.95E-39 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold BV404_RS11365 bb465fc6e1b419591fb67e1ef62d622c 695 Gene3D G3DSA:3.40.50.300 2 283 4.6E-96 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11365 bb465fc6e1b419591fb67e1ef62d622c 695 SUPERFAMILY SSF54980 401 478 6.47E-21 T 09-03-2017 IPR009022 Elongation factor G, III-V domain BV404_RS11365 bb465fc6e1b419591fb67e1ef62d622c 695 Pfam PF03144 Elongation factor Tu domain 2 321 388 1.1E-15 T 09-03-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 BV404_RS11365 bb465fc6e1b419591fb67e1ef62d622c 695 Gene3D G3DSA:3.30.230.10 481 596 8.4E-44 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BV404_RS11365 bb465fc6e1b419591fb67e1ef62d622c 695 SMART SM00889 477 595 6.5E-62 T 09-03-2017 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 BV404_RS11365 bb465fc6e1b419591fb67e1ef62d622c 695 Pfam PF00009 Elongation factor Tu GTP binding domain 6 277 2.7E-62 T 09-03-2017 BV404_RS11365 bb465fc6e1b419591fb67e1ef62d622c 695 SUPERFAMILY SSF54980 600 689 2.23E-28 T 09-03-2017 IPR009022 Elongation factor G, III-V domain BV404_RS11365 bb465fc6e1b419591fb67e1ef62d622c 695 PRINTS PR00315 GTP-binding elongation factor signature 9 22 4.8E-14 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BV404_RS11365 bb465fc6e1b419591fb67e1ef62d622c 695 PRINTS PR00315 GTP-binding elongation factor signature 75 85 4.8E-14 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BV404_RS11365 bb465fc6e1b419591fb67e1ef62d622c 695 PRINTS PR00315 GTP-binding elongation factor signature 55 63 4.8E-14 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BV404_RS11365 bb465fc6e1b419591fb67e1ef62d622c 695 PRINTS PR00315 GTP-binding elongation factor signature 127 136 4.8E-14 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BV404_RS11365 bb465fc6e1b419591fb67e1ef62d622c 695 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 176 1.6E-25 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 BV404_RS11365 bb465fc6e1b419591fb67e1ef62d622c 695 Gene3D G3DSA:3.30.70.870 403 477 9.9E-32 T 09-03-2017 BV404_RS11365 bb465fc6e1b419591fb67e1ef62d622c 695 Pfam PF03764 Elongation factor G, domain IV 476 594 8.8E-44 T 09-03-2017 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 BV404_RS11365 bb465fc6e1b419591fb67e1ef62d622c 695 Gene3D G3DSA:3.30.70.240 597 682 1.6E-31 T 09-03-2017 IPR000640 Translation elongation factor EFG, V domain BV404_RS11365 bb465fc6e1b419591fb67e1ef62d622c 695 Pfam PF00679 Elongation factor G C-terminus 597 683 3.2E-28 T 09-03-2017 IPR000640 Translation elongation factor EFG, V domain BV404_RS11365 bb465fc6e1b419591fb67e1ef62d622c 695 TIGRFAM TIGR00484 EF-G: translation elongation factor G 3 689 9.2E-291 T 09-03-2017 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BV404_RS11365 bb465fc6e1b419591fb67e1ef62d622c 695 SUPERFAMILY SSF50447 261 399 7.07E-32 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain BV404_RS11365 bb465fc6e1b419591fb67e1ef62d622c 695 SMART SM00838 597 684 2.3E-46 T 09-03-2017 IPR000640 Translation elongation factor EFG, V domain BV404_RS11365 bb465fc6e1b419591fb67e1ef62d622c 695 Hamap MF_00054_B Elongation factor G [fusA]. 3 688 100.178 T 09-03-2017 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BV404_RS11365 bb465fc6e1b419591fb67e1ef62d622c 695 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 09-03-2017 IPR031157 Tr-type G domain, conserved site BV404_RS11365 bb465fc6e1b419591fb67e1ef62d622c 695 SUPERFAMILY SSF52540 3 277 1.89E-98 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS04745 1eaa9690ad8f9b77d5252d29f64924ce 287 SUPERFAMILY SSF54637 6 114 6.34E-40 T 09-03-2017 IPR029069 HotDog domain BV404_RS04745 1eaa9690ad8f9b77d5252d29f64924ce 287 Pfam PF13622 Thioesterase-like superfamily 33 282 5.2E-61 T 09-03-2017 BV404_RS04745 1eaa9690ad8f9b77d5252d29f64924ce 287 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 2.3E-96 T 09-03-2017 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-75105 BV404_RS04745 1eaa9690ad8f9b77d5252d29f64924ce 287 SUPERFAMILY SSF54637 116 283 4.52E-59 T 09-03-2017 IPR029069 HotDog domain BV404_RS04745 1eaa9690ad8f9b77d5252d29f64924ce 287 Gene3D G3DSA:3.10.129.10 4 116 7.2E-47 T 09-03-2017 IPR029069 HotDog domain BV404_RS04745 1eaa9690ad8f9b77d5252d29f64924ce 287 Gene3D G3DSA:3.10.129.10 124 285 3.0E-58 T 09-03-2017 IPR029069 HotDog domain BV404_RS11775 73eef7cccce2fbcd613effeabfbf08b3 367 Pfam PF03969 AFG1-like ATPase 1 364 1.0E-161 T 09-03-2017 IPR005654 ATPase, AFG1-like GO:0005524 BV404_RS11775 73eef7cccce2fbcd613effeabfbf08b3 367 SUPERFAMILY SSF52540 60 200 1.86E-13 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11775 73eef7cccce2fbcd613effeabfbf08b3 367 Gene3D G3DSA:3.40.50.300 4 177 2.0E-23 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11775 73eef7cccce2fbcd613effeabfbf08b3 367 Hamap MF_01919 Cell division protein ZapE [zapE]. 1 367 54.247 T 09-03-2017 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 BV404_RS11370 f56b6dbf7e9de3c7da2fc02414c33193 459 Pfam PF13541 Subunit ChlI of Mg-chelatase 347 432 3.9E-9 T 09-03-2017 BV404_RS11370 f56b6dbf7e9de3c7da2fc02414c33193 459 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 453 1.2E-223 T 09-03-2017 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 BV404_RS11370 f56b6dbf7e9de3c7da2fc02414c33193 459 Pfam PF13481 AAA domain 80 224 3.1E-14 T 09-03-2017 BV404_RS11370 f56b6dbf7e9de3c7da2fc02414c33193 459 Gene3D G3DSA:3.30.230.10 286 455 8.0E-38 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BV404_RS11370 f56b6dbf7e9de3c7da2fc02414c33193 459 SUPERFAMILY SSF52540 70 291 3.77E-48 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11370 f56b6dbf7e9de3c7da2fc02414c33193 459 Hamap MF_01498 DNA repair protein RadA [radA]. 21 457 42.772 T 09-03-2017 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 BV404_RS11370 f56b6dbf7e9de3c7da2fc02414c33193 459 SMART SM00382 93 246 1.6E-8 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS11370 f56b6dbf7e9de3c7da2fc02414c33193 459 SUPERFAMILY SSF54211 305 455 1.33E-42 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold BV404_RS11370 f56b6dbf7e9de3c7da2fc02414c33193 459 SUPERFAMILY SSF54211 257 271 1.33E-42 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold BV404_RS11370 f56b6dbf7e9de3c7da2fc02414c33193 459 PRINTS PR01874 DNA repair protein radA signature 324 347 8.9E-94 T 09-03-2017 BV404_RS11370 f56b6dbf7e9de3c7da2fc02414c33193 459 PRINTS PR01874 DNA repair protein radA signature 85 113 8.9E-94 T 09-03-2017 BV404_RS11370 f56b6dbf7e9de3c7da2fc02414c33193 459 PRINTS PR01874 DNA repair protein radA signature 215 243 8.9E-94 T 09-03-2017 BV404_RS11370 f56b6dbf7e9de3c7da2fc02414c33193 459 PRINTS PR01874 DNA repair protein radA signature 10 34 8.9E-94 T 09-03-2017 BV404_RS11370 f56b6dbf7e9de3c7da2fc02414c33193 459 PRINTS PR01874 DNA repair protein radA signature 126 143 8.9E-94 T 09-03-2017 BV404_RS11370 f56b6dbf7e9de3c7da2fc02414c33193 459 PRINTS PR01874 DNA repair protein radA signature 176 200 8.9E-94 T 09-03-2017 BV404_RS11370 f56b6dbf7e9de3c7da2fc02414c33193 459 PRINTS PR01874 DNA repair protein radA signature 250 276 8.9E-94 T 09-03-2017 BV404_RS11370 f56b6dbf7e9de3c7da2fc02414c33193 459 Gene3D G3DSA:3.40.50.300 62 279 3.9E-50 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS02125 db8f841c7ca6c18ab7516ecb6b9ae49e 341 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 5 39 9.0E-7 T 09-03-2017 IPR025966 Oligopeptide transport permease C-like, N-terminal domain BV404_RS02125 db8f841c7ca6c18ab7516ecb6b9ae49e 341 SUPERFAMILY SSF161098 96 278 1.31E-18 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS02125 db8f841c7ca6c18ab7516ecb6b9ae49e 341 Gene3D G3DSA:1.10.3720.10 93 296 4.4E-19 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS02125 db8f841c7ca6c18ab7516ecb6b9ae49e 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 300 1.2E-18 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS11580 011eb67f02213584de32cbff772ca447 137 SUPERFAMILY SSF54593 5 125 5.64E-22 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BV404_RS11580 011eb67f02213584de32cbff772ca447 137 Gene3D G3DSA:3.10.180.10 5 122 1.3E-19 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BV404_RS11580 011eb67f02213584de32cbff772ca447 137 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 97 4.0E-8 T 09-03-2017 BV404_RS13250 c819870cc9336801968dfe6422ae302c 437 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 09-03-2017 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BV404_RS13250 c819870cc9336801968dfe6422ae302c 437 SMART SM00487 28 234 2.3E-54 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain BV404_RS13250 c819870cc9336801968dfe6422ae302c 437 Pfam PF00270 DEAD/DEAH box helicase 33 207 8.6E-45 T 09-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BV404_RS13250 c819870cc9336801968dfe6422ae302c 437 SMART SM00490 270 351 1.8E-33 T 09-03-2017 IPR001650 Helicase, C-terminal BV404_RS13250 c819870cc9336801968dfe6422ae302c 437 Gene3D G3DSA:3.40.50.300 7 223 6.6E-74 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS13250 c819870cc9336801968dfe6422ae302c 437 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 50.63 T 09-03-2017 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 BV404_RS13250 c819870cc9336801968dfe6422ae302c 437 Gene3D G3DSA:3.40.50.300 224 382 1.3E-50 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS13250 c819870cc9336801968dfe6422ae302c 437 SUPERFAMILY SSF52540 85 362 1.1E-71 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS13250 c819870cc9336801968dfe6422ae302c 437 Pfam PF00271 Helicase conserved C-terminal domain 243 351 2.5E-30 T 09-03-2017 IPR001650 Helicase, C-terminal BV404_RS20790 d2b04bcc00560d1a3dc7cd0154e9ab33 59 SUPERFAMILY SSF82866 3 59 6.54E-13 T 09-03-2017 BV404_RS20790 d2b04bcc00560d1a3dc7cd0154e9ab33 59 Gene3D G3DSA:1.10.3850.10 1 59 4.5E-15 T 09-03-2017 BV404_RS20790 d2b04bcc00560d1a3dc7cd0154e9ab33 59 Pfam PF00873 AcrB/AcrD/AcrF family 5 59 7.9E-10 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS11535 b05404136e3ee0cef0bc8afabe34a5b3 1511 Gene3D G3DSA:3.60.20.10 21 454 1.3E-182 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal BV404_RS11535 b05404136e3ee0cef0bc8afabe34a5b3 1511 SUPERFAMILY SSF51395 461 1220 4.03E-268 T 09-03-2017 BV404_RS11535 b05404136e3ee0cef0bc8afabe34a5b3 1511 Gene3D G3DSA:2.160.20.60 1241 1507 5.9E-107 T 09-03-2017 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 BV404_RS11535 b05404136e3ee0cef0bc8afabe34a5b3 1511 Gene3D G3DSA:3.20.20.70 455 804 2.9E-108 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS11535 b05404136e3ee0cef0bc8afabe34a5b3 1511 Pfam PF00310 Glutamine amidotransferases class-II 21 443 9.3E-186 T 09-03-2017 IPR017932 Glutamine amidotransferase type 2 domain BV404_RS11535 b05404136e3ee0cef0bc8afabe34a5b3 1511 Pfam PF04898 Glutamate synthase central domain 472 756 1.1E-115 T 09-03-2017 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 BV404_RS11535 b05404136e3ee0cef0bc8afabe34a5b3 1511 Pfam PF01493 GXGXG motif 1267 1452 8.4E-82 T 09-03-2017 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 BV404_RS11535 b05404136e3ee0cef0bc8afabe34a5b3 1511 SUPERFAMILY SSF56235 21 446 1.97E-152 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal BV404_RS11535 b05404136e3ee0cef0bc8afabe34a5b3 1511 Pfam PF01645 Conserved region in glutamate synthase 817 1187 2.8E-149 T 09-03-2017 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 BV404_RS11535 b05404136e3ee0cef0bc8afabe34a5b3 1511 Gene3D G3DSA:3.20.20.70 856 1219 2.3E-178 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS11535 b05404136e3ee0cef0bc8afabe34a5b3 1511 SUPERFAMILY SSF69336 1235 1498 9.29E-95 T 09-03-2017 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 BV404_RS09215 91fda0fad53d6e2e93acf1d3bae6e6ff 444 Pfam PF02954 Bacterial regulatory protein, Fis family 395 435 6.5E-8 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BV404_RS09215 91fda0fad53d6e2e93acf1d3bae6e6ff 444 SUPERFAMILY SSF52172 2 188 1.42E-36 T 09-03-2017 IPR011006 CheY-like superfamily BV404_RS09215 91fda0fad53d6e2e93acf1d3bae6e6ff 444 Gene3D G3DSA:1.10.8.60 317 368 1.2E-22 T 09-03-2017 BV404_RS09215 91fda0fad53d6e2e93acf1d3bae6e6ff 444 Pfam PF00158 Sigma-54 interaction domain 144 310 1.4E-69 T 09-03-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BV404_RS09215 91fda0fad53d6e2e93acf1d3bae6e6ff 444 SMART SM00448 2 114 6.0E-23 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS09215 91fda0fad53d6e2e93acf1d3bae6e6ff 444 Pfam PF00072 Response regulator receiver domain 4 114 6.7E-24 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS09215 91fda0fad53d6e2e93acf1d3bae6e6ff 444 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 168 181 - T 09-03-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BV404_RS09215 91fda0fad53d6e2e93acf1d3bae6e6ff 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 09-03-2017 IPR025944 Sigma-54 interaction domain, conserved site BV404_RS09215 91fda0fad53d6e2e93acf1d3bae6e6ff 444 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 09-03-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BV404_RS09215 91fda0fad53d6e2e93acf1d3bae6e6ff 444 Gene3D G3DSA:3.40.50.300 143 316 3.7E-55 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09215 91fda0fad53d6e2e93acf1d3bae6e6ff 444 SUPERFAMILY SSF46689 385 438 7.53E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS09215 91fda0fad53d6e2e93acf1d3bae6e6ff 444 Gene3D G3DSA:1.10.10.60 369 437 6.4E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS09215 91fda0fad53d6e2e93acf1d3bae6e6ff 444 Gene3D G3DSA:3.40.50.2300 3 126 1.6E-31 T 09-03-2017 BV404_RS09215 91fda0fad53d6e2e93acf1d3bae6e6ff 444 SUPERFAMILY SSF52540 144 374 2.4E-67 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09215 91fda0fad53d6e2e93acf1d3bae6e6ff 444 SMART SM00382 164 308 6.6E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS00555 abddb5f71c8ce5def06a49ab2e445cf0 335 SMART SM00354 1 71 1.2E-33 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BV404_RS00555 abddb5f71c8ce5def06a49ab2e445cf0 335 Pfam PF13377 Periplasmic binding protein-like domain 168 328 5.8E-42 T 09-03-2017 BV404_RS00555 abddb5f71c8ce5def06a49ab2e445cf0 335 Gene3D G3DSA:1.10.260.40 1 57 1.7E-24 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 BV404_RS00555 abddb5f71c8ce5def06a49ab2e445cf0 335 SUPERFAMILY SSF47413 1 59 1.69E-17 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 BV404_RS00555 abddb5f71c8ce5def06a49ab2e445cf0 335 SUPERFAMILY SSF53822 60 332 1.13E-89 T 09-03-2017 IPR028082 Periplasmic binding protein-like I BV404_RS00555 abddb5f71c8ce5def06a49ab2e445cf0 335 Gene3D G3DSA:3.40.50.2300 168 330 4.3E-65 T 09-03-2017 BV404_RS00555 abddb5f71c8ce5def06a49ab2e445cf0 335 Gene3D G3DSA:3.40.50.2300 58 167 1.1E-32 T 09-03-2017 BV404_RS00555 abddb5f71c8ce5def06a49ab2e445cf0 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 09-03-2017 BV404_RS00555 abddb5f71c8ce5def06a49ab2e445cf0 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.3E-20 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BV404_RS00260 165919589f553d753631ede19be9fbd2 168 SUPERFAMILY SSF103054 89 167 1.7E-23 T 09-03-2017 IPR023229 Type II secretion system protein M, periplasmic domain BV404_RS00260 165919589f553d753631ede19be9fbd2 168 Gene3D G3DSA:3.30.1360.100 89 167 1.6E-34 T 09-03-2017 IPR023229 Type II secretion system protein M, periplasmic domain BV404_RS00260 165919589f553d753631ede19be9fbd2 168 PIRSF PIRSF006291 7 167 1.0E-40 T 09-03-2017 IPR007690 Type II secretion system, protein M GO:0006858 BV404_RS00260 165919589f553d753631ede19be9fbd2 168 Pfam PF04612 Type II secretion system (T2SS), protein M 12 166 6.3E-52 T 09-03-2017 IPR007690 Type II secretion system, protein M GO:0006858 BV404_RS09060 f3566eaa236f19bf1b06487a849e95a1 463 SUPERFAMILY SSF48452 67 160 1.35E-6 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BV404_RS09060 f3566eaa236f19bf1b06487a849e95a1 463 SUPERFAMILY SSF48452 204 261 1.35E-6 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BV404_RS09060 f3566eaa236f19bf1b06487a849e95a1 463 Gene3D G3DSA:1.25.40.10 200 243 6.5E-6 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BV404_RS09060 f3566eaa236f19bf1b06487a849e95a1 463 Gene3D G3DSA:1.25.40.10 43 102 6.5E-6 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BV404_RS09060 f3566eaa236f19bf1b06487a849e95a1 463 Gene3D G3DSA:1.25.40.10 134 164 6.5E-6 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BV404_RS08835 b306fdda6d4fc445bc773a4a0d42ee61 460 SUPERFAMILY SSF47323 316 459 6.93E-40 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BV404_RS08835 b306fdda6d4fc445bc773a4a0d42ee61 460 SMART SM00840 341 402 4.8E-28 T 09-03-2017 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 BV404_RS08835 b306fdda6d4fc445bc773a4a0d42ee61 460 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 6.0E-144 T 09-03-2017 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 BV404_RS08835 b306fdda6d4fc445bc773a4a0d42ee61 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 3.6E-29 T 09-03-2017 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 BV404_RS08835 b306fdda6d4fc445bc773a4a0d42ee61 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 3.6E-29 T 09-03-2017 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 BV404_RS08835 b306fdda6d4fc445bc773a4a0d42ee61 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 3.6E-29 T 09-03-2017 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 BV404_RS08835 b306fdda6d4fc445bc773a4a0d42ee61 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 3.6E-29 T 09-03-2017 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 BV404_RS08835 b306fdda6d4fc445bc773a4a0d42ee61 460 Pfam PF09190 DALR domain 341 402 6.2E-25 T 09-03-2017 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 BV404_RS08835 b306fdda6d4fc445bc773a4a0d42ee61 460 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 459 1.3E-194 T 09-03-2017 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 BV404_RS08835 b306fdda6d4fc445bc773a4a0d42ee61 460 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 460 39.337 T 09-03-2017 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 BV404_RS08835 b306fdda6d4fc445bc773a4a0d42ee61 460 Gene3D G3DSA:1.20.120.640 306 392 3.4E-27 T 09-03-2017 BV404_RS08835 b306fdda6d4fc445bc773a4a0d42ee61 460 SUPERFAMILY SSF52374 1 313 4.86E-105 T 09-03-2017 BV404_RS08835 b306fdda6d4fc445bc773a4a0d42ee61 460 Gene3D G3DSA:3.40.50.620 20 305 9.7E-115 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS13330 b108646ba03ffd343086fb6a533b5cc1 530 SMART SM00851 19 132 7.0E-61 T 09-03-2017 IPR011607 Methylglyoxal synthase-like domain BV404_RS13330 b108646ba03ffd343086fb6a533b5cc1 530 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 530 45.694 T 09-03-2017 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BV404_RS13330 b108646ba03ffd343086fb6a533b5cc1 530 Gene3D G3DSA:3.40.140.20 378 520 1.5E-60 T 09-03-2017 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BV404_RS13330 b108646ba03ffd343086fb6a533b5cc1 530 PIRSF PIRSF000414 1 530 1.5E-227 T 09-03-2017 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BV404_RS13330 b108646ba03ffd343086fb6a533b5cc1 530 SMART SM00798 137 462 1.6E-216 T 09-03-2017 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BV404_RS13330 b108646ba03ffd343086fb6a533b5cc1 530 Gene3D G3DSA:3.40.140.20 254 373 8.7E-50 T 09-03-2017 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BV404_RS13330 b108646ba03ffd343086fb6a533b5cc1 530 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 530 3.9E-259 T 09-03-2017 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BV404_RS13330 b108646ba03ffd343086fb6a533b5cc1 530 SUPERFAMILY SSF52335 7 197 4.97E-72 T 09-03-2017 IPR011607 Methylglyoxal synthase-like domain BV404_RS13330 b108646ba03ffd343086fb6a533b5cc1 530 SUPERFAMILY SSF53927 222 530 6.32E-130 T 09-03-2017 IPR016193 Cytidine deaminase-like GO:0003824 BV404_RS13330 b108646ba03ffd343086fb6a533b5cc1 530 Gene3D G3DSA:3.40.50.1380 5 190 1.3E-86 T 09-03-2017 IPR011607 Methylglyoxal synthase-like domain BV404_RS13330 b108646ba03ffd343086fb6a533b5cc1 530 Pfam PF02142 MGS-like domain 19 132 1.2E-29 T 09-03-2017 IPR011607 Methylglyoxal synthase-like domain BV404_RS13330 b108646ba03ffd343086fb6a533b5cc1 530 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 460 9.8E-119 T 09-03-2017 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BV404_RS03710 c236e0ef348a6d55fbfa30884b241d70 337 Gene3D G3DSA:3.40.50.720 1 143 2.7E-64 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS03710 c236e0ef348a6d55fbfa30884b241d70 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 319 6.9E-63 T 09-03-2017 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BV404_RS03710 c236e0ef348a6d55fbfa30884b241d70 337 SUPERFAMILY SSF55347 131 320 1.67E-78 T 09-03-2017 BV404_RS03710 c236e0ef348a6d55fbfa30884b241d70 337 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 6 334 1.5E-129 T 09-03-2017 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 BV404_RS03710 c236e0ef348a6d55fbfa30884b241d70 337 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 333 36.498 T 09-03-2017 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 BV404_RS03710 c236e0ef348a6d55fbfa30884b241d70 337 SUPERFAMILY SSF51735 5 159 7.08E-52 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS03710 c236e0ef348a6d55fbfa30884b241d70 337 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 232 246 - T 09-03-2017 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 BV404_RS03710 c236e0ef348a6d55fbfa30884b241d70 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 120 2.0E-32 T 09-03-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 BV404_RS03710 c236e0ef348a6d55fbfa30884b241d70 337 SMART SM00859 6 121 1.7E-42 T 09-03-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 BV404_RS03710 c236e0ef348a6d55fbfa30884b241d70 337 PIRSF PIRSF000148 4 337 3.7E-133 T 09-03-2017 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 BV404_RS03710 c236e0ef348a6d55fbfa30884b241d70 337 Gene3D G3DSA:3.30.360.10 144 315 7.1E-81 T 09-03-2017 BV404_RS13070 90a924eefef227f81d6c9feb5ef70f4d 164 PIRSF PIRSF016548 3 164 1.4E-69 T 09-03-2017 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 BV404_RS13070 90a924eefef227f81d6c9feb5ef70f4d 164 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 3 154 5.9E-56 T 09-03-2017 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 BV404_RS14810 27028990f9b6e30f857ea7482b20be2f 285 PRINTS PR00046 Major sigma-70 factor signature 233 245 1.4E-18 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS14810 27028990f9b6e30f857ea7482b20be2f 285 PRINTS PR00046 Major sigma-70 factor signature 267 278 1.4E-18 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS14810 27028990f9b6e30f857ea7482b20be2f 285 PRINTS PR00046 Major sigma-70 factor signature 252 267 1.4E-18 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS14810 27028990f9b6e30f857ea7482b20be2f 285 PRINTS PR00046 Major sigma-70 factor signature 77 90 1.4E-18 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS14810 27028990f9b6e30f857ea7482b20be2f 285 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 15 282 1.4E-126 T 09-03-2017 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 BV404_RS14810 27028990f9b6e30f857ea7482b20be2f 285 Gene3D G3DSA:1.10.601.10 13 122 1.8E-34 T 09-03-2017 BV404_RS14810 27028990f9b6e30f857ea7482b20be2f 285 Gene3D G3DSA:1.10.10.10 224 281 2.7E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS14810 27028990f9b6e30f857ea7482b20be2f 285 Pfam PF00140 Sigma-70 factor, region 1.2 14 40 6.5E-8 T 09-03-2017 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS14810 27028990f9b6e30f857ea7482b20be2f 285 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 281 7.4E-35 T 09-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS14810 27028990f9b6e30f857ea7482b20be2f 285 Pfam PF04542 Sigma-70 region 2 53 122 4.8E-17 T 09-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS14810 27028990f9b6e30f857ea7482b20be2f 285 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 284 53.503 T 09-03-2017 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 BV404_RS14810 27028990f9b6e30f857ea7482b20be2f 285 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 252 278 - T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS14810 27028990f9b6e30f857ea7482b20be2f 285 SUPERFAMILY SSF88659 197 282 8.22E-20 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS14810 27028990f9b6e30f857ea7482b20be2f 285 SUPERFAMILY SSF88946 11 122 7.06E-41 T 09-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS14810 27028990f9b6e30f857ea7482b20be2f 285 Pfam PF04545 Sigma-70, region 4 229 279 2.2E-16 T 09-03-2017 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS14810 27028990f9b6e30f857ea7482b20be2f 285 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS03630 ab4706bfe53a0cf719ab57a4006ea946 299 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 274 286 - T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BV404_RS03630 ab4706bfe53a0cf719ab57a4006ea946 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 98 107 5.6E-18 T 09-03-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BV404_RS03630 ab4706bfe53a0cf719ab57a4006ea946 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 170 184 5.6E-18 T 09-03-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BV404_RS03630 ab4706bfe53a0cf719ab57a4006ea946 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 198 210 5.6E-18 T 09-03-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BV404_RS03630 ab4706bfe53a0cf719ab57a4006ea946 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 287 297 5.6E-18 T 09-03-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BV404_RS03630 ab4706bfe53a0cf719ab57a4006ea946 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 219 231 5.6E-18 T 09-03-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BV404_RS03630 ab4706bfe53a0cf719ab57a4006ea946 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 158 170 5.6E-18 T 09-03-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BV404_RS03630 ab4706bfe53a0cf719ab57a4006ea946 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 226 246 1.5E-65 T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BV404_RS03630 ab4706bfe53a0cf719ab57a4006ea946 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 119 139 1.5E-65 T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BV404_RS03630 ab4706bfe53a0cf719ab57a4006ea946 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 139 158 1.5E-65 T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BV404_RS03630 ab4706bfe53a0cf719ab57a4006ea946 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 100 119 1.5E-65 T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BV404_RS03630 ab4706bfe53a0cf719ab57a4006ea946 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 271 296 1.5E-65 T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BV404_RS03630 ab4706bfe53a0cf719ab57a4006ea946 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 247 268 1.5E-65 T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BV404_RS03630 ab4706bfe53a0cf719ab57a4006ea946 299 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 226 241 - T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BV404_RS03630 ab4706bfe53a0cf719ab57a4006ea946 299 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 102 297 8.2E-83 T 09-03-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BV404_RS03630 ab4706bfe53a0cf719ab57a4006ea946 299 Pfam PF00813 FliP family 102 293 5.5E-79 T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BV404_RS12420 c75543a754376447fefa0f6788d2d0f2 333 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 32 321 3.2E-106 T 09-03-2017 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 BV404_RS12420 c75543a754376447fefa0f6788d2d0f2 333 Gene3D G3DSA:3.40.718.10 3 328 1.8E-131 T 09-03-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 BV404_RS12420 c75543a754376447fefa0f6788d2d0f2 333 SUPERFAMILY SSF53659 3 326 1.76E-110 T 09-03-2017 BV404_RS12420 c75543a754376447fefa0f6788d2d0f2 333 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 5 324 1.8E-127 T 09-03-2017 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 BV404_RS12420 c75543a754376447fefa0f6788d2d0f2 333 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 2 325 35.218 T 09-03-2017 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 BV404_RS12765 ae13bfa1eab813d3522a28efdf168b1c 577 SUPERFAMILY SSF55124 351 427 4.09E-21 T 09-03-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BV404_RS12765 ae13bfa1eab813d3522a28efdf168b1c 577 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 178 334 6.6E-45 T 09-03-2017 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BV404_RS12765 ae13bfa1eab813d3522a28efdf168b1c 577 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 436 550 3.1E-5 T 09-03-2017 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BV404_RS12765 ae13bfa1eab813d3522a28efdf168b1c 577 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 24 565 1.4E-283 T 09-03-2017 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BV404_RS12765 ae13bfa1eab813d3522a28efdf168b1c 577 Gene3D G3DSA:3.90.480.10 347 427 3.7E-61 T 09-03-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BV404_RS12765 ae13bfa1eab813d3522a28efdf168b1c 577 Gene3D G3DSA:3.90.480.10 79 151 3.7E-61 T 09-03-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BV404_RS12765 ae13bfa1eab813d3522a28efdf168b1c 577 Gene3D G3DSA:3.30.413.10 154 345 5.7E-72 T 09-03-2017 BV404_RS12765 ae13bfa1eab813d3522a28efdf168b1c 577 Gene3D G3DSA:3.30.413.10 435 564 1.7E-33 T 09-03-2017 BV404_RS12765 ae13bfa1eab813d3522a28efdf168b1c 577 SUPERFAMILY SSF56014 434 566 7.72E-33 T 09-03-2017 BV404_RS12765 ae13bfa1eab813d3522a28efdf168b1c 577 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 484 500 - T 09-03-2017 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BV404_RS12765 ae13bfa1eab813d3522a28efdf168b1c 577 PRINTS PR00397 Sirohaem Fe-binding site signature 435 453 4.7E-9 T 09-03-2017 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BV404_RS12765 ae13bfa1eab813d3522a28efdf168b1c 577 PRINTS PR00397 Sirohaem Fe-binding site signature 484 502 4.7E-9 T 09-03-2017 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BV404_RS12765 ae13bfa1eab813d3522a28efdf168b1c 577 SUPERFAMILY SSF56014 154 349 1.02E-59 T 09-03-2017 BV404_RS12765 ae13bfa1eab813d3522a28efdf168b1c 577 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 358 419 2.1E-14 T 09-03-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BV404_RS12765 ae13bfa1eab813d3522a28efdf168b1c 577 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 84 143 6.5E-13 T 09-03-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BV404_RS12765 ae13bfa1eab813d3522a28efdf168b1c 577 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 15 577 58.413 T 09-03-2017 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BV404_RS12765 ae13bfa1eab813d3522a28efdf168b1c 577 SUPERFAMILY SSF55124 19 150 3.76E-27 T 09-03-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BV404_RS03595 3c303a1c6529a388a66164452a6923e3 440 Gene3D G3DSA:3.40.50.300 94 359 8.9E-93 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS03595 3c303a1c6529a388a66164452a6923e3 440 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 22 437 4.3E-174 T 09-03-2017 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 BV404_RS03595 3c303a1c6529a388a66164452a6923e3 440 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 146 357 4.9E-73 T 09-03-2017 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 BV404_RS03595 3c303a1c6529a388a66164452a6923e3 440 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 348 357 - T 09-03-2017 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 BV404_RS03595 3c303a1c6529a388a66164452a6923e3 440 SMART SM00382 158 342 7.6E-6 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS03595 3c303a1c6529a388a66164452a6923e3 440 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 24 435 1.2E-193 T 09-03-2017 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 BV404_RS03595 3c303a1c6529a388a66164452a6923e3 440 SUPERFAMILY SSF52540 93 362 4.81E-96 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11830 54b066b8f16786c00f6259f30ffa2fdc 172 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 154 1.0E-71 T 09-03-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BV404_RS11830 54b066b8f16786c00f6259f30ffa2fdc 172 PIRSF PIRSF006160 1 162 2.9E-65 T 09-03-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BV404_RS11830 54b066b8f16786c00f6259f30ffa2fdc 172 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 34.607 T 09-03-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BV404_RS11830 54b066b8f16786c00f6259f30ffa2fdc 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 2.2E-50 T 09-03-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BV404_RS11830 54b066b8f16786c00f6259f30ffa2fdc 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 2.2E-50 T 09-03-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BV404_RS11830 54b066b8f16786c00f6259f30ffa2fdc 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 2.2E-50 T 09-03-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BV404_RS11830 54b066b8f16786c00f6259f30ffa2fdc 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 2.2E-50 T 09-03-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BV404_RS11830 54b066b8f16786c00f6259f30ffa2fdc 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 2.2E-50 T 09-03-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BV404_RS11830 54b066b8f16786c00f6259f30ffa2fdc 172 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 154 2.1E-60 T 09-03-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BV404_RS11830 54b066b8f16786c00f6259f30ffa2fdc 172 SUPERFAMILY SSF63411 4 162 1.28E-64 T 09-03-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BV404_RS11830 54b066b8f16786c00f6259f30ffa2fdc 172 Gene3D G3DSA:3.30.1360.80 1 171 1.5E-74 T 09-03-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BV404_RS00310 a51a9920121f789de0b2b67414ad2d7a 161 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 5.0E-23 T 09-03-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 BV404_RS00310 a51a9920121f789de0b2b67414ad2d7a 161 Gene3D G3DSA:3.10.50.30 76 157 1.1E-26 T 09-03-2017 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 BV404_RS00310 a51a9920121f789de0b2b67414ad2d7a 161 SUPERFAMILY SSF54534 80 157 3.4E-19 T 09-03-2017 BV404_RS00310 a51a9920121f789de0b2b67414ad2d7a 161 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 09-03-2017 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 BV404_RS00310 a51a9920121f789de0b2b67414ad2d7a 161 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 26.231 T 09-03-2017 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 BV404_RS00310 a51a9920121f789de0b2b67414ad2d7a 161 SUPERFAMILY SSF46557 3 78 1.96E-25 T 09-03-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 BV404_RS00310 a51a9920121f789de0b2b67414ad2d7a 161 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 157 7.9E-22 T 09-03-2017 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 BV404_RS00310 a51a9920121f789de0b2b67414ad2d7a 161 PIRSF PIRSF006092 1 159 3.6E-43 T 09-03-2017 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 BV404_RS00310 a51a9920121f789de0b2b67414ad2d7a 161 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 158 50.444 T 09-03-2017 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 BV404_RS00310 a51a9920121f789de0b2b67414ad2d7a 161 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 2 159 2.5E-73 T 09-03-2017 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 BV404_RS00310 a51a9920121f789de0b2b67414ad2d7a 161 Gene3D G3DSA:1.10.287.180 1 75 2.5E-22 T 09-03-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 BV404_RS00310 a51a9920121f789de0b2b67414ad2d7a 161 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 09-03-2017 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 BV404_RS08275 b91f5274968315b6d862d80b54f725dc 495 Pfam PF00171 Aldehyde dehydrogenase family 31 487 2.4E-176 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 BV404_RS08275 b91f5274968315b6d862d80b54f725dc 495 Gene3D G3DSA:3.40.309.10 279 463 3.6E-74 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 BV404_RS08275 b91f5274968315b6d862d80b54f725dc 495 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 264 271 - T 09-03-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 BV404_RS08275 b91f5274968315b6d862d80b54f725dc 495 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 293 304 - T 09-03-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 BV404_RS08275 b91f5274968315b6d862d80b54f725dc 495 Gene3D G3DSA:3.40.605.10 19 278 1.7E-95 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 BV404_RS08275 b91f5274968315b6d862d80b54f725dc 495 SUPERFAMILY SSF53720 7 492 5.24E-172 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 BV404_RS00755 369860d0a47ab28b6c05be1a3e5a653f 334 SUPERFAMILY SSF53067 182 320 3.48E-7 T 09-03-2017 BV404_RS00755 369860d0a47ab28b6c05be1a3e5a653f 334 Pfam PF11104 Type IV pilus assembly protein PilM; 8 219 5.1E-32 T 09-03-2017 IPR005883 Type IV pilus assembly protein PilM BV404_RS00755 369860d0a47ab28b6c05be1a3e5a653f 334 Pfam PF11104 Type IV pilus assembly protein PilM; 236 324 2.0E-14 T 09-03-2017 IPR005883 Type IV pilus assembly protein PilM BV404_RS00755 369860d0a47ab28b6c05be1a3e5a653f 334 PIRSF PIRSF019169 1 326 2.1E-81 T 09-03-2017 IPR005883 Type IV pilus assembly protein PilM BV404_RS00755 369860d0a47ab28b6c05be1a3e5a653f 334 SUPERFAMILY SSF53067 5 161 2.59E-6 T 09-03-2017 BV404_RS00755 369860d0a47ab28b6c05be1a3e5a653f 334 Gene3D G3DSA:3.30.420.40 184 290 5.2E-6 T 09-03-2017 BV404_RS00755 369860d0a47ab28b6c05be1a3e5a653f 334 Gene3D G3DSA:3.30.420.40 3 99 4.2E-5 T 09-03-2017 BV404_RS00755 369860d0a47ab28b6c05be1a3e5a653f 334 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 3 325 8.0E-97 T 09-03-2017 IPR005883 Type IV pilus assembly protein PilM BV404_RS01805 7ae07b164e3cce61a49bc5d968386212 404 Gene3D G3DSA:1.10.3090.10 122 359 6.6E-56 T 09-03-2017 BV404_RS01805 7ae07b164e3cce61a49bc5d968386212 404 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 404 52.524 T 09-03-2017 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 BV404_RS01805 7ae07b164e3cce61a49bc5d968386212 404 SUPERFAMILY SSF81891 120 402 3.14E-55 T 09-03-2017 BV404_RS01805 7ae07b164e3cce61a49bc5d968386212 404 Pfam PF01966 HD domain 230 326 3.0E-7 T 09-03-2017 IPR006674 HD domain BV404_RS01805 7ae07b164e3cce61a49bc5d968386212 404 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 3.6E-13 T 09-03-2017 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 BV404_RS01805 7ae07b164e3cce61a49bc5d968386212 404 SUPERFAMILY SSF81301 2 119 2.07E-31 T 09-03-2017 BV404_RS01805 7ae07b164e3cce61a49bc5d968386212 404 Gene3D G3DSA:3.30.460.10 2 121 5.8E-31 T 09-03-2017 BV404_RS01805 7ae07b164e3cce61a49bc5d968386212 404 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 43.283 T 09-03-2017 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 BV404_RS01805 7ae07b164e3cce61a49bc5d968386212 404 Pfam PF01743 Poly A polymerase head domain 3 122 1.2E-17 T 09-03-2017 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 BV404_RS01805 7ae07b164e3cce61a49bc5d968386212 404 PIRSF PIRSF000813 1 404 4.0E-199 T 09-03-2017 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 BV404_RS11855 5e4eb8e8f475be3cf21a98dfd8052702 316 Gene3D G3DSA:3.90.180.10 3 153 2.0E-42 T 09-03-2017 IPR011032 GroES-like BV404_RS11855 5e4eb8e8f475be3cf21a98dfd8052702 316 Pfam PF13602 Zinc-binding dehydrogenase 191 312 3.0E-21 T 09-03-2017 BV404_RS11855 5e4eb8e8f475be3cf21a98dfd8052702 316 SUPERFAMILY SSF50129 4 154 1.67E-35 T 09-03-2017 IPR011032 GroES-like BV404_RS11855 5e4eb8e8f475be3cf21a98dfd8052702 316 SUPERFAMILY SSF51735 122 246 3.81E-30 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS11855 5e4eb8e8f475be3cf21a98dfd8052702 316 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 92 2.5E-8 T 09-03-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BV404_RS11855 5e4eb8e8f475be3cf21a98dfd8052702 316 Gene3D G3DSA:3.40.50.720 154 239 5.5E-20 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS11855 5e4eb8e8f475be3cf21a98dfd8052702 316 SMART SM00829 12 312 2.0E-14 T 09-03-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BV404_RS09110 cbd66f177c2cae7bbe441ee54d0d9862 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 09-03-2017 IPR019885 Transcription regulator HTH, AsnC-type, conserved site BV404_RS09110 cbd66f177c2cae7bbe441ee54d0d9862 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 9.1E-23 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 BV404_RS09110 cbd66f177c2cae7bbe441ee54d0d9862 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 9.1E-23 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 BV404_RS09110 cbd66f177c2cae7bbe441ee54d0d9862 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 9.1E-23 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 BV404_RS09110 cbd66f177c2cae7bbe441ee54d0d9862 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 59 6.1E-22 T 09-03-2017 BV404_RS09110 cbd66f177c2cae7bbe441ee54d0d9862 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 2.7E-23 T 09-03-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BV404_RS09110 cbd66f177c2cae7bbe441ee54d0d9862 164 SMART SM00344 12 121 7.3E-55 T 09-03-2017 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 BV404_RS09110 cbd66f177c2cae7bbe441ee54d0d9862 164 SUPERFAMILY SSF46785 12 70 2.17E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS09110 cbd66f177c2cae7bbe441ee54d0d9862 164 Gene3D G3DSA:1.10.10.10 13 64 6.3E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS09110 cbd66f177c2cae7bbe441ee54d0d9862 164 Gene3D G3DSA:3.30.70.920 65 161 1.3E-32 T 09-03-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BV404_RS09110 cbd66f177c2cae7bbe441ee54d0d9862 164 SUPERFAMILY SSF54909 74 158 1.34E-21 T 09-03-2017 IPR011008 Dimeric alpha-beta barrel BV404_RS05810 61127fcb5a59ea0c15540b5734edf59d 260 Pfam PF08241 Methyltransferase domain 52 148 2.2E-12 T 09-03-2017 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 BV404_RS05810 61127fcb5a59ea0c15540b5734edf59d 260 Gene3D G3DSA:3.40.50.150 38 259 2.3E-26 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS05810 61127fcb5a59ea0c15540b5734edf59d 260 SUPERFAMILY SSF53335 6 249 9.69E-35 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS05810 61127fcb5a59ea0c15540b5734edf59d 260 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 3 259 40.994 T 09-03-2017 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 BV404_RS02425 8e52bc62044226bd9a0002cc5c2ff9f4 296 Pfam PF03466 LysR substrate binding domain 97 288 1.2E-12 T 09-03-2017 IPR005119 LysR, substrate-binding BV404_RS02425 8e52bc62044226bd9a0002cc5c2ff9f4 296 Gene3D G3DSA:1.10.10.10 3 81 7.8E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS02425 8e52bc62044226bd9a0002cc5c2ff9f4 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 6.0E-15 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS02425 8e52bc62044226bd9a0002cc5c2ff9f4 296 Gene3D G3DSA:3.40.190.10 196 253 1.1E-4 T 09-03-2017 BV404_RS02425 8e52bc62044226bd9a0002cc5c2ff9f4 296 SUPERFAMILY SSF46785 2 85 2.18E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS02425 8e52bc62044226bd9a0002cc5c2ff9f4 296 Gene3D G3DSA:3.40.190.10 97 195 7.4E-5 T 09-03-2017 BV404_RS02425 8e52bc62044226bd9a0002cc5c2ff9f4 296 SUPERFAMILY SSF53850 93 288 4.65E-23 T 09-03-2017 BV404_RS01485 eb27fb684916cb92c18b7ba2c6017c76 135 Gene3D G3DSA:4.10.430.10 92 135 7.4E-25 T 09-03-2017 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 BV404_RS01485 eb27fb684916cb92c18b7ba2c6017c76 135 SUPERFAMILY SSF81273 2 58 3.34E-16 T 09-03-2017 BV404_RS01485 eb27fb684916cb92c18b7ba2c6017c76 135 Pfam PF00816 H-NS histone family 33 128 1.9E-19 T 09-03-2017 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 BV404_RS01485 eb27fb684916cb92c18b7ba2c6017c76 135 Gene3D G3DSA:1.10.287.1050 1 58 6.7E-17 T 09-03-2017 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 BV404_RS01485 eb27fb684916cb92c18b7ba2c6017c76 135 SMART SM00528 88 135 7.0E-23 T 09-03-2017 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 BV404_RS01485 eb27fb684916cb92c18b7ba2c6017c76 135 PIRSF PIRSF002096 1 135 3.2E-51 T 09-03-2017 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 BV404_RS01485 eb27fb684916cb92c18b7ba2c6017c76 135 SUPERFAMILY SSF81273 93 135 3.45E-12 T 09-03-2017 BV404_RS09195 ccbe936823562dd6d58624e6e47f8175 208 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 1.4E-53 T 09-03-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BV404_RS09195 ccbe936823562dd6d58624e6e47f8175 208 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 1.4E-53 T 09-03-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BV404_RS09195 ccbe936823562dd6d58624e6e47f8175 208 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 1.4E-53 T 09-03-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BV404_RS09195 ccbe936823562dd6d58624e6e47f8175 208 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 1.4E-53 T 09-03-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BV404_RS09195 ccbe936823562dd6d58624e6e47f8175 208 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 1.4E-53 T 09-03-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BV404_RS09195 ccbe936823562dd6d58624e6e47f8175 208 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 09-03-2017 IPR018215 ClpP, Ser active site BV404_RS09195 ccbe936823562dd6d58624e6e47f8175 208 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 09-03-2017 IPR033135 ClpP, histidine active site BV404_RS09195 ccbe936823562dd6d58624e6e47f8175 208 Gene3D G3DSA:3.90.226.10 16 204 2.1E-91 T 09-03-2017 IPR029045 ClpP/crotonase-like domain BV404_RS09195 ccbe936823562dd6d58624e6e47f8175 208 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 15 205 1.6E-105 T 09-03-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BV404_RS09195 ccbe936823562dd6d58624e6e47f8175 208 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 44.031 T 09-03-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BV404_RS09195 ccbe936823562dd6d58624e6e47f8175 208 SUPERFAMILY SSF52096 23 206 1.34E-74 T 09-03-2017 IPR029045 ClpP/crotonase-like domain BV404_RS09195 ccbe936823562dd6d58624e6e47f8175 208 Pfam PF00574 Clp protease 25 205 1.2E-87 T 09-03-2017 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA BV404_RS10940 047e122af9e5ab0dbf07aac1b90721e8 617 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 09-03-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 BV404_RS10940 047e122af9e5ab0dbf07aac1b90721e8 617 Gene3D G3DSA:3.90.640.10 239 309 3.6E-5 T 09-03-2017 BV404_RS10940 047e122af9e5ab0dbf07aac1b90721e8 617 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 616 2.8E-268 T 09-03-2017 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 BV404_RS10940 047e122af9e5ab0dbf07aac1b90721e8 617 SUPERFAMILY SSF100934 504 616 1.77E-35 T 09-03-2017 IPR029048 Heat shock protein 70kD, C-terminal domain Reactome: R-HSA-3371453 BV404_RS10940 047e122af9e5ab0dbf07aac1b90721e8 617 Gene3D G3DSA:2.60.34.10 387 528 9.5E-55 T 09-03-2017 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 BV404_RS10940 047e122af9e5ab0dbf07aac1b90721e8 617 PRINTS PR00301 70kDa heat shock protein signature 360 380 4.5E-55 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BV404_RS10940 047e122af9e5ab0dbf07aac1b90721e8 617 PRINTS PR00301 70kDa heat shock protein signature 20 33 4.5E-55 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BV404_RS10940 047e122af9e5ab0dbf07aac1b90721e8 617 PRINTS PR00301 70kDa heat shock protein signature 152 172 4.5E-55 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BV404_RS10940 047e122af9e5ab0dbf07aac1b90721e8 617 PRINTS PR00301 70kDa heat shock protein signature 466 482 4.5E-55 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BV404_RS10940 047e122af9e5ab0dbf07aac1b90721e8 617 PRINTS PR00301 70kDa heat shock protein signature 211 221 4.5E-55 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BV404_RS10940 047e122af9e5ab0dbf07aac1b90721e8 617 PRINTS PR00301 70kDa heat shock protein signature 385 404 4.5E-55 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BV404_RS10940 047e122af9e5ab0dbf07aac1b90721e8 617 PRINTS PR00301 70kDa heat shock protein signature 329 345 4.5E-55 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BV404_RS10940 047e122af9e5ab0dbf07aac1b90721e8 617 PRINTS PR00301 70kDa heat shock protein signature 48 60 4.5E-55 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BV404_RS10940 047e122af9e5ab0dbf07aac1b90721e8 617 SUPERFAMILY SSF100920 384 537 9.16E-52 T 09-03-2017 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 BV404_RS10940 047e122af9e5ab0dbf07aac1b90721e8 617 Gene3D G3DSA:3.30.30.30 70 120 1.8E-11 T 09-03-2017 BV404_RS10940 047e122af9e5ab0dbf07aac1b90721e8 617 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 09-03-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 BV404_RS10940 047e122af9e5ab0dbf07aac1b90721e8 617 SUPERFAMILY SSF53067 19 196 1.29E-51 T 09-03-2017 BV404_RS10940 047e122af9e5ab0dbf07aac1b90721e8 617 Gene3D G3DSA:3.30.420.40 133 205 8.8E-53 T 09-03-2017 BV404_RS10940 047e122af9e5ab0dbf07aac1b90721e8 617 Gene3D G3DSA:3.30.420.40 21 69 8.8E-53 T 09-03-2017 BV404_RS10940 047e122af9e5ab0dbf07aac1b90721e8 617 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 617 46.126 T 09-03-2017 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 BV404_RS10940 047e122af9e5ab0dbf07aac1b90721e8 617 Gene3D G3DSA:1.20.1270.10 529 616 7.3E-31 T 09-03-2017 IPR029048 Heat shock protein 70kD, C-terminal domain Reactome: R-HSA-3371453 BV404_RS10940 047e122af9e5ab0dbf07aac1b90721e8 617 SUPERFAMILY SSF53067 200 377 8.19E-50 T 09-03-2017 BV404_RS10940 047e122af9e5ab0dbf07aac1b90721e8 617 Gene3D G3DSA:3.30.420.40 314 356 3.3E-31 T 09-03-2017 BV404_RS10940 047e122af9e5ab0dbf07aac1b90721e8 617 Gene3D G3DSA:3.30.420.40 206 238 3.3E-31 T 09-03-2017 BV404_RS10940 047e122af9e5ab0dbf07aac1b90721e8 617 Pfam PF00012 Hsp70 protein 22 601 2.3E-192 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BV404_RS07135 456d34f3db33137314f10163d89a41fa 250 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 09-03-2017 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 BV404_RS07135 456d34f3db33137314f10163d89a41fa 250 Pfam PF13545 Crp-like helix-turn-helix domain 168 241 4.6E-17 T 09-03-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BV404_RS07135 456d34f3db33137314f10163d89a41fa 250 SUPERFAMILY SSF51206 23 162 2.49E-31 T 09-03-2017 IPR018490 Cyclic nucleotide-binding-like BV404_RS07135 456d34f3db33137314f10163d89a41fa 250 Gene3D G3DSA:2.60.120.10 18 169 4.7E-41 T 09-03-2017 IPR014710 RmlC-like jelly roll fold BV404_RS07135 456d34f3db33137314f10163d89a41fa 250 SMART SM00419 187 235 4.3E-15 T 09-03-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BV404_RS07135 456d34f3db33137314f10163d89a41fa 250 SUPERFAMILY SSF46785 165 244 7.09E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS07135 456d34f3db33137314f10163d89a41fa 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 2.6E-11 T 09-03-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BV404_RS07135 456d34f3db33137314f10163d89a41fa 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 2.6E-11 T 09-03-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BV404_RS07135 456d34f3db33137314f10163d89a41fa 250 Gene3D G3DSA:1.10.10.10 170 244 6.0E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS07135 456d34f3db33137314f10163d89a41fa 250 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 6.7E-15 T 09-03-2017 IPR000595 Cyclic nucleotide-binding domain BV404_RS07135 456d34f3db33137314f10163d89a41fa 250 SMART SM00100 30 151 1.7E-20 T 09-03-2017 IPR000595 Cyclic nucleotide-binding domain BV404_RS14365 d1a3c6d4b9b8d8553bb592f4785d9a09 269 Pfam PF00899 ThiF family 10 244 1.0E-59 T 09-03-2017 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 BV404_RS14365 d1a3c6d4b9b8d8553bb592f4785d9a09 269 Gene3D G3DSA:3.40.50.720 3 248 7.4E-67 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS14365 d1a3c6d4b9b8d8553bb592f4785d9a09 269 SUPERFAMILY SSF69572 2 248 5.36E-77 T 09-03-2017 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 BV404_RS07125 4f975513953a25b035ff6ca905b0538a 310 SUPERFAMILY SSF52402 18 237 2.39E-56 T 09-03-2017 BV404_RS07125 4f975513953a25b035ff6ca905b0538a 310 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 3 270 57.652 T 09-03-2017 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 Reactome: R-HSA-6782315 BV404_RS07125 4f975513953a25b035ff6ca905b0538a 310 Gene3D G3DSA:3.40.50.620 26 208 4.4E-22 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS07125 4f975513953a25b035ff6ca905b0538a 310 PIRSF PIRSF004976 2 274 2.4E-76 T 09-03-2017 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 Reactome: R-HSA-6782315 BV404_RS07125 4f975513953a25b035ff6ca905b0538a 310 Pfam PF01171 PP-loop family 43 202 7.2E-15 T 09-03-2017 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 BV404_RS22320 4bec9bfa8739db666e48b9cc6a97adda 241 SUPERFAMILY SSF51569 2 241 1.57E-95 T 09-03-2017 BV404_RS22320 4bec9bfa8739db666e48b9cc6a97adda 241 Gene3D G3DSA:3.20.20.70 2 241 3.2E-108 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS22320 4bec9bfa8739db666e48b9cc6a97adda 241 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 2 241 3.7E-118 T 09-03-2017 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 BV404_RS22320 4bec9bfa8739db666e48b9cc6a97adda 241 Pfam PF00793 DAHP synthetase I family 16 241 1.1E-74 T 09-03-2017 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 BV404_RS03935 2bf6a8e1b3c91f3649111cb6480a8d8d 326 SUPERFAMILY SSF50341 179 314 8.63E-14 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 BV404_RS03935 2bf6a8e1b3c91f3649111cb6480a8d8d 326 SMART SM00260 178 312 5.0E-4 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 BV404_RS03935 2bf6a8e1b3c91f3649111cb6480a8d8d 326 PIRSF PIRSF020479 4 326 1.7E-120 T 09-03-2017 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like BV404_RS03935 2bf6a8e1b3c91f3649111cb6480a8d8d 326 Pfam PF01584 CheW-like domain 182 314 1.6E-13 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 BV404_RS05570 8f43c9bc084c578fcc545e056cfe70c8 231 PIRSF PIRSF006755 1 227 2.6E-78 T 09-03-2017 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 BV404_RS05570 8f43c9bc084c578fcc545e056cfe70c8 231 Pfam PF13500 AAA domain 4 211 1.1E-37 T 09-03-2017 BV404_RS05570 8f43c9bc084c578fcc545e056cfe70c8 231 SUPERFAMILY SSF52540 1 215 2.92E-62 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS05570 8f43c9bc084c578fcc545e056cfe70c8 231 Gene3D G3DSA:3.40.50.300 4 220 1.7E-79 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS05570 8f43c9bc084c578fcc545e056cfe70c8 231 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 218 29.525 T 09-03-2017 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 BV404_RS05570 8f43c9bc084c578fcc545e056cfe70c8 231 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 176 1.6E-54 T 09-03-2017 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 BV404_RS00905 8dcdbcc72bb37595530b415de7cb9eb6 438 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 09-03-2017 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 BV404_RS00905 8dcdbcc72bb37595530b415de7cb9eb6 438 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 431 2.3E-191 T 09-03-2017 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 BV404_RS00905 8dcdbcc72bb37595530b415de7cb9eb6 438 SUPERFAMILY SSF52540 3 436 5.1E-178 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS00905 8dcdbcc72bb37595530b415de7cb9eb6 438 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 438 216.498 T 09-03-2017 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 BV404_RS00905 8dcdbcc72bb37595530b415de7cb9eb6 438 Gene3D G3DSA:1.10.300.10 103 195 4.5E-38 T 09-03-2017 BV404_RS00905 8dcdbcc72bb37595530b415de7cb9eb6 438 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 09-03-2017 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 BV404_RS00905 8dcdbcc72bb37595530b415de7cb9eb6 438 SMART SM00788 4 431 5.2E-302 T 09-03-2017 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 BV404_RS00905 8dcdbcc72bb37595530b415de7cb9eb6 438 Gene3D G3DSA:3.40.440.10 4 94 1.2E-70 T 09-03-2017 BV404_RS00905 8dcdbcc72bb37595530b415de7cb9eb6 438 Gene3D G3DSA:3.40.440.10 196 266 1.2E-70 T 09-03-2017 BV404_RS00905 8dcdbcc72bb37595530b415de7cb9eb6 438 Gene3D G3DSA:3.90.170.10 267 431 2.6E-63 T 09-03-2017 BV404_RS00905 8dcdbcc72bb37595530b415de7cb9eb6 438 Pfam PF00709 Adenylosuccinate synthetase 5 430 1.5E-175 T 09-03-2017 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 BV404_RS03930 edd70b3af7d30d6ca00c70a5d3efafcd 258 SUPERFAMILY SSF52540 1 252 4.93E-57 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS03930 edd70b3af7d30d6ca00c70a5d3efafcd 258 Pfam PF13614 AAA domain 4 181 1.0E-50 T 09-03-2017 IPR025669 AAA domain BV404_RS03930 edd70b3af7d30d6ca00c70a5d3efafcd 258 Gene3D G3DSA:3.40.50.300 3 248 4.5E-58 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09675 999029e24bd120e685a91c94eb43a3c1 81 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 81 5.1E-21 T 09-03-2017 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 Reactome: R-HSA-947581 BV404_RS09675 999029e24bd120e685a91c94eb43a3c1 81 Pfam PF02597 ThiS family 4 81 6.1E-23 T 09-03-2017 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 BV404_RS09675 999029e24bd120e685a91c94eb43a3c1 81 SUPERFAMILY SSF54285 1 81 4.09E-22 T 09-03-2017 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp BV404_RS09675 999029e24bd120e685a91c94eb43a3c1 81 Gene3D G3DSA:3.10.20.30 1 81 1.3E-24 T 09-03-2017 IPR012675 Beta-grasp domain BV404_RS18480 fe8ad61c5ea61b1b6c4e61d37914d9b1 114 Gene3D G3DSA:3.40.50.150 1 31 2.1E-5 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS18480 fe8ad61c5ea61b1b6c4e61d37914d9b1 114 Pfam PF01266 FAD dependent oxidoreductase 48 100 1.5E-11 T 09-03-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 BV404_RS18480 fe8ad61c5ea61b1b6c4e61d37914d9b1 114 Gene3D G3DSA:3.50.50.60 48 97 1.6E-9 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS18480 fe8ad61c5ea61b1b6c4e61d37914d9b1 114 SUPERFAMILY SSF51971 48 102 4.94E-10 T 09-03-2017 BV404_RS18480 fe8ad61c5ea61b1b6c4e61d37914d9b1 114 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 1 24 9.7E-5 T 09-03-2017 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 BV404_RS01310 8dafa9f4d9a424b632477de33e9ca6db 164 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 4 152 2.6E-55 T 09-03-2017 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 BV404_RS01310 8dafa9f4d9a424b632477de33e9ca6db 164 Pfam PF02470 MlaD protein 39 118 1.0E-20 T 09-03-2017 IPR003399 Mce/MlaD BV404_RS01100 02d1e989dc7475d9f24bf0bf51cd1e22 195 Pfam PF00027 Cyclic nucleotide-binding domain 37 120 5.0E-10 T 09-03-2017 IPR000595 Cyclic nucleotide-binding domain BV404_RS01100 02d1e989dc7475d9f24bf0bf51cd1e22 195 SUPERFAMILY SSF51206 23 146 7.2E-21 T 09-03-2017 IPR018490 Cyclic nucleotide-binding-like BV404_RS01100 02d1e989dc7475d9f24bf0bf51cd1e22 195 Gene3D G3DSA:2.60.120.10 12 157 6.5E-29 T 09-03-2017 IPR014710 RmlC-like jelly roll fold BV404_RS14235 ec6ae60f9f28380b83b4d00b391860d1 288 Gene3D G3DSA:1.10.287.80 237 283 1.5E-30 T 09-03-2017 BV404_RS14235 ec6ae60f9f28380b83b4d00b391860d1 288 Pfam PF00231 ATP synthase 5 287 2.2E-92 T 09-03-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 BV404_RS14235 ec6ae60f9f28380b83b4d00b391860d1 288 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 288 3.3E-111 T 09-03-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 BV404_RS14235 ec6ae60f9f28380b83b4d00b391860d1 288 SUPERFAMILY SSF52943 2 288 5.79E-96 T 09-03-2017 IPR023633 ATPase, F1 complex, gamma subunit domain Reactome: R-HSA-163210 BV404_RS14235 ec6ae60f9f28380b83b4d00b391860d1 288 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 288 36.631 T 09-03-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 BV404_RS14235 ec6ae60f9f28380b83b4d00b391860d1 288 Gene3D G3DSA:1.10.287.80 203 236 8.8E-39 T 09-03-2017 BV404_RS14235 ec6ae60f9f28380b83b4d00b391860d1 288 Gene3D G3DSA:1.10.287.80 19 60 8.8E-39 T 09-03-2017 BV404_RS14235 ec6ae60f9f28380b83b4d00b391860d1 288 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 274 287 - T 09-03-2017 IPR023632 ATPase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210 BV404_RS14235 ec6ae60f9f28380b83b4d00b391860d1 288 PRINTS PR00126 ATP synthase gamma subunit signature 235 254 1.3E-36 T 09-03-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 BV404_RS14235 ec6ae60f9f28380b83b4d00b391860d1 288 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 1.3E-36 T 09-03-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 BV404_RS14235 ec6ae60f9f28380b83b4d00b391860d1 288 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.3E-36 T 09-03-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 BV404_RS14235 ec6ae60f9f28380b83b4d00b391860d1 288 PRINTS PR00126 ATP synthase gamma subunit signature 266 287 1.3E-36 T 09-03-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 BV404_RS14235 ec6ae60f9f28380b83b4d00b391860d1 288 Gene3D G3DSA:3.40.1380.10 64 191 2.0E-44 T 09-03-2017 BV404_RS04435 973e733235c018e84be126328c071759 570 PIRSF PIRSF004983 3 570 2.8E-187 T 09-03-2017 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 BV404_RS04435 973e733235c018e84be126328c071759 570 SUPERFAMILY SSF52518 376 568 7.23E-25 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold BV404_RS04435 973e733235c018e84be126328c071759 570 Pfam PF16582 Middle domain of thiamine pyrophosphate 188 402 4.9E-42 T 09-03-2017 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 BV404_RS04435 973e733235c018e84be126328c071759 570 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 12 443 3.5E-136 T 09-03-2017 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 BV404_RS04435 973e733235c018e84be126328c071759 570 Gene3D G3DSA:3.40.50.970 12 185 7.5E-42 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold BV404_RS04435 973e733235c018e84be126328c071759 570 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 14 141 6.0E-29 T 09-03-2017 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 BV404_RS04435 973e733235c018e84be126328c071759 570 Gene3D G3DSA:3.40.50.970 356 560 1.2E-21 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold BV404_RS04435 973e733235c018e84be126328c071759 570 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 6 567 33.016 T 09-03-2017 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 BV404_RS04435 973e733235c018e84be126328c071759 570 SUPERFAMILY SSF52467 223 367 3.27E-8 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain BV404_RS04435 973e733235c018e84be126328c071759 570 SUPERFAMILY SSF52518 9 184 1.28E-30 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold BV404_RS14530 07a5e95999dfff66801a97f3560045f8 276 SUPERFAMILY SSF109604 5 244 2.73E-56 T 09-03-2017 BV404_RS14530 07a5e95999dfff66801a97f3560045f8 276 Pfam PF08668 HDOD domain 13 206 1.6E-49 T 09-03-2017 IPR013976 Metal-dependent hydrolase HDOD BV404_RS14530 07a5e95999dfff66801a97f3560045f8 276 Gene3D G3DSA:1.10.3150.10 4 257 2.6E-63 T 09-03-2017 IPR013976 Metal-dependent hydrolase HDOD BV404_RS00190 645f16b0fafebd4fe6df044d342daaa4 542 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 11 541 5.5E-276 T 09-03-2017 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 BV404_RS00190 645f16b0fafebd4fe6df044d342daaa4 542 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 266 281 - T 09-03-2017 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 BV404_RS00190 645f16b0fafebd4fe6df044d342daaa4 542 PIRSF PIRSF006294 4 541 4.6E-226 T 09-03-2017 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 BV404_RS00190 645f16b0fafebd4fe6df044d342daaa4 542 SUPERFAMILY SSF53795 230 541 3.01E-128 T 09-03-2017 BV404_RS00190 645f16b0fafebd4fe6df044d342daaa4 542 Gene3D G3DSA:3.40.449.10 24 228 1.0E-85 T 09-03-2017 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 BV404_RS00190 645f16b0fafebd4fe6df044d342daaa4 542 SUPERFAMILY SSF68923 11 228 8.02E-87 T 09-03-2017 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 BV404_RS00190 645f16b0fafebd4fe6df044d342daaa4 542 Gene3D G3DSA:3.90.228.20 229 291 1.1E-121 T 09-03-2017 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 BV404_RS00190 645f16b0fafebd4fe6df044d342daaa4 542 Gene3D G3DSA:3.90.228.20 352 540 1.1E-121 T 09-03-2017 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 BV404_RS00190 645f16b0fafebd4fe6df044d342daaa4 542 Hamap MF_00453 Phosphoenolpyruvate carboxykinase [ATP] [pckA]. 18 539 54.805 T 09-03-2017 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 BV404_RS00190 645f16b0fafebd4fe6df044d342daaa4 542 Pfam PF01293 Phosphoenolpyruvate carboxykinase 24 491 8.8E-210 T 09-03-2017 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 BV404_RS07910 92670518b8e13f0bf3aefd308fd53a42 186 Pfam PF07209 Protein of unknown function (DUF1415) 10 177 7.0E-66 T 09-03-2017 IPR009858 Protein of unknown function DUF1415 BV404_RS04710 8636a29a79d725961bf434418b3cbbb1 579 Pfam PF01514 Secretory protein of YscJ/FliF family 48 239 7.8E-62 T 09-03-2017 IPR006182 Secretory protein YscJ/FliF BV404_RS04710 8636a29a79d725961bf434418b3cbbb1 579 PRINTS PR01009 Flagellar M-ring protein signature 139 157 4.7E-27 T 09-03-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BV404_RS04710 8636a29a79d725961bf434418b3cbbb1 579 PRINTS PR01009 Flagellar M-ring protein signature 357 381 4.7E-27 T 09-03-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BV404_RS04710 8636a29a79d725961bf434418b3cbbb1 579 PRINTS PR01009 Flagellar M-ring protein signature 171 185 4.7E-27 T 09-03-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BV404_RS04710 8636a29a79d725961bf434418b3cbbb1 579 PRINTS PR01009 Flagellar M-ring protein signature 286 304 4.7E-27 T 09-03-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BV404_RS04710 8636a29a79d725961bf434418b3cbbb1 579 PRINTS PR01009 Flagellar M-ring protein signature 215 233 4.7E-27 T 09-03-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BV404_RS04710 8636a29a79d725961bf434418b3cbbb1 579 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 39 568 2.3E-72 T 09-03-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BV404_RS04710 8636a29a79d725961bf434418b3cbbb1 579 Pfam PF08345 Flagellar M-ring protein C-terminal 273 427 2.0E-36 T 09-03-2017 IPR013556 Flagellar M-ring C-terminal BV404_RS04710 8636a29a79d725961bf434418b3cbbb1 579 PIRSF PIRSF004862 21 570 1.6E-123 T 09-03-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BV404_RS04265 078d22f28f28c08377297bb523d28a83 414 Gene3D G3DSA:3.40.47.10 3 258 1.3E-79 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 BV404_RS04265 078d22f28f28c08377297bb523d28a83 414 SMART SM00825 Beta-ketoacyl synthase 6 414 7.3E-16 T 09-03-2017 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BV404_RS04265 078d22f28f28c08377297bb523d28a83 414 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 09-03-2017 IPR018201 Beta-ketoacyl synthase, active site BV404_RS04265 078d22f28f28c08377297bb523d28a83 414 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 370 3.0E-36 T 09-03-2017 IPR014031 Beta-ketoacyl synthase, C-terminal BV404_RS04265 078d22f28f28c08377297bb523d28a83 414 SUPERFAMILY SSF53901 4 252 4.98E-80 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 BV404_RS04265 078d22f28f28c08377297bb523d28a83 414 PIRSF PIRSF000447 1 414 2.3E-202 T 09-03-2017 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 BV404_RS04265 078d22f28f28c08377297bb523d28a83 414 SUPERFAMILY SSF53901 215 413 3.11E-67 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 BV404_RS04265 078d22f28f28c08377297bb523d28a83 414 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 9.4E-64 T 09-03-2017 IPR014030 Beta-ketoacyl synthase, N-terminal BV404_RS04265 078d22f28f28c08377297bb523d28a83 414 Gene3D G3DSA:3.40.47.10 263 413 1.0E-57 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 BV404_RS04265 078d22f28f28c08377297bb523d28a83 414 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 412 2.1E-191 T 09-03-2017 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 BV404_RS01825 0607ca10f535c576a4c5de3265b47da8 419 Pfam PF01384 Phosphate transporter family 26 407 1.3E-118 T 09-03-2017 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 BV404_RS05400 7af72f21f558af8d26e1c35433520360 306 Gene3D G3DSA:1.10.3720.10 88 302 3.3E-20 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS05400 7af72f21f558af8d26e1c35433520360 306 SUPERFAMILY SSF161098 88 290 6.87E-21 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS05400 7af72f21f558af8d26e1c35433520360 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 1.3E-41 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS12770 9ac5f07374289864ec0000ae559953a0 617 SUPERFAMILY SSF52218 81 226 2.0E-47 T 09-03-2017 IPR029039 Flavoprotein-like domain BV404_RS12770 9ac5f07374289864ec0000ae559953a0 617 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 543 559 2.1E-28 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BV404_RS12770 9ac5f07374289864ec0000ae559953a0 617 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 566 574 2.1E-28 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BV404_RS12770 9ac5f07374289864ec0000ae559953a0 617 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 404 411 2.1E-28 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BV404_RS12770 9ac5f07374289864ec0000ae559953a0 617 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 512 523 2.1E-28 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BV404_RS12770 9ac5f07374289864ec0000ae559953a0 617 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 499 508 2.1E-28 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BV404_RS12770 9ac5f07374289864ec0000ae559953a0 617 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 474 493 2.1E-28 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BV404_RS12770 9ac5f07374289864ec0000ae559953a0 617 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 288 298 2.1E-28 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BV404_RS12770 9ac5f07374289864ec0000ae559953a0 617 Gene3D G3DSA:2.40.30.10 402 472 3.3E-40 T 09-03-2017 BV404_RS12770 9ac5f07374289864ec0000ae559953a0 617 Gene3D G3DSA:2.40.30.10 246 298 3.3E-40 T 09-03-2017 BV404_RS12770 9ac5f07374289864ec0000ae559953a0 617 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 14 617 49.804 T 09-03-2017 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BV404_RS12770 9ac5f07374289864ec0000ae559953a0 617 Gene3D G3DSA:1.20.990.10 299 401 2.7E-35 T 09-03-2017 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 GO:0016491|GO:0055114 BV404_RS12770 9ac5f07374289864ec0000ae559953a0 617 PIRSF PIRSF000207 14 617 1.6E-273 T 09-03-2017 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BV404_RS12770 9ac5f07374289864ec0000ae559953a0 617 SUPERFAMILY SSF63380 246 463 1.05E-63 T 09-03-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 BV404_RS12770 9ac5f07374289864ec0000ae559953a0 617 Pfam PF00175 Oxidoreductase NAD-binding domain 475 581 6.3E-20 T 09-03-2017 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 BV404_RS12770 9ac5f07374289864ec0000ae559953a0 617 Gene3D G3DSA:3.40.50.80 473 616 6.5E-61 T 09-03-2017 BV404_RS12770 9ac5f07374289864ec0000ae559953a0 617 Pfam PF00667 FAD binding domain 250 442 2.3E-30 T 09-03-2017 IPR003097 FAD-binding, type 1 GO:0016491|GO:0055114 BV404_RS12770 9ac5f07374289864ec0000ae559953a0 617 SUPERFAMILY SSF52343 462 617 1.1E-52 T 09-03-2017 BV404_RS12770 9ac5f07374289864ec0000ae559953a0 617 Gene3D G3DSA:3.40.50.360 75 227 2.7E-48 T 09-03-2017 IPR029039 Flavoprotein-like domain BV404_RS12770 9ac5f07374289864ec0000ae559953a0 617 PRINTS PR00369 Flavodoxin signature 163 173 1.7E-12 T 09-03-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BV404_RS12770 9ac5f07374289864ec0000ae559953a0 617 PRINTS PR00369 Flavodoxin signature 131 142 1.7E-12 T 09-03-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BV404_RS12770 9ac5f07374289864ec0000ae559953a0 617 PRINTS PR00369 Flavodoxin signature 187 206 1.7E-12 T 09-03-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BV404_RS12770 9ac5f07374289864ec0000ae559953a0 617 PRINTS PR00369 Flavodoxin signature 83 96 1.7E-12 T 09-03-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BV404_RS12770 9ac5f07374289864ec0000ae559953a0 617 Pfam PF00258 Flavodoxin 84 207 9.5E-31 T 09-03-2017 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 BV404_RS12770 9ac5f07374289864ec0000ae559953a0 617 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 22 617 2.5E-259 T 09-03-2017 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BV404_RS11035 bfb428e9c4a225930b7fb82fd6ca7e20 250 Pfam PF03932 CutC family 4 205 7.5E-86 T 09-03-2017 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 BV404_RS11035 bfb428e9c4a225930b7fb82fd6ca7e20 250 SUPERFAMILY SSF110395 4 247 4.05E-77 T 09-03-2017 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 BV404_RS11035 bfb428e9c4a225930b7fb82fd6ca7e20 250 Gene3D G3DSA:3.20.20.380 3 248 5.4E-94 T 09-03-2017 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 BV404_RS11035 bfb428e9c4a225930b7fb82fd6ca7e20 250 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 3 247 41.658 T 09-03-2017 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 BV404_RS03650 10d50da3bc8e8d82a990eec41077818c 184 SUPERFAMILY SSF160443 103 179 1.7E-12 T 09-03-2017 IPR002625 Smr domain BV404_RS03650 10d50da3bc8e8d82a990eec41077818c 184 SMART SM00463 102 180 5.3E-18 T 09-03-2017 IPR002625 Smr domain BV404_RS03650 10d50da3bc8e8d82a990eec41077818c 184 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 181 38.238 T 09-03-2017 IPR022990 Uncharacterised protein family UPF0115 BV404_RS03650 10d50da3bc8e8d82a990eec41077818c 184 Pfam PF01713 Smr domain 105 179 3.0E-19 T 09-03-2017 IPR002625 Smr domain BV404_RS00955 1dc3f83136094783a7b663c808a99eff 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.757 T 09-03-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS00955 1dc3f83136094783a7b663c808a99eff 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 1.1E-46 T 09-03-2017 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 BV404_RS00955 1dc3f83136094783a7b663c808a99eff 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 6.9E-25 T 09-03-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS00955 1dc3f83136094783a7b663c808a99eff 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 6.9E-25 T 09-03-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS00955 1dc3f83136094783a7b663c808a99eff 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 6.9E-25 T 09-03-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS00955 1dc3f83136094783a7b663c808a99eff 92 Pfam PF00203 Ribosomal protein S19 3 83 2.9E-37 T 09-03-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS00955 1dc3f83136094783a7b663c808a99eff 92 PIRSF PIRSF002144 1 92 9.2E-32 T 09-03-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS00955 1dc3f83136094783a7b663c808a99eff 92 Gene3D G3DSA:3.30.860.10 1 91 2.3E-41 T 09-03-2017 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS00955 1dc3f83136094783a7b663c808a99eff 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 09-03-2017 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS00955 1dc3f83136094783a7b663c808a99eff 92 SUPERFAMILY SSF54570 3 84 1.01E-35 T 09-03-2017 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS05200 8e36658f5992837d5be9034e001eac14 460 SMART SM00382 288 454 7.3E-6 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS05200 8e36658f5992837d5be9034e001eac14 460 SMART SM00382 29 221 2.7E-6 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS05200 8e36658f5992837d5be9034e001eac14 460 SUPERFAMILY SSF52540 253 460 3.48E-44 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS05200 8e36658f5992837d5be9034e001eac14 460 Gene3D G3DSA:3.40.50.300 2 248 2.5E-52 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS05200 8e36658f5992837d5be9034e001eac14 460 Gene3D G3DSA:3.40.50.300 261 459 2.2E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS05200 8e36658f5992837d5be9034e001eac14 460 Pfam PF00005 ABC transporter 280 415 3.9E-22 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS05200 8e36658f5992837d5be9034e001eac14 460 Pfam PF00005 ABC transporter 21 173 2.2E-19 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS05200 8e36658f5992837d5be9034e001eac14 460 SUPERFAMILY SSF52540 4 243 9.09E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS05200 8e36658f5992837d5be9034e001eac14 460 ProSitePatterns PS00211 ABC transporters family signature. 387 401 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS06185 a9a9a9867789d2e872f294009c00025d 505 SUPERFAMILY SSF53649 30 502 3.05E-126 T 09-03-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 BV404_RS06185 a9a9a9867789d2e872f294009c00025d 505 Gene3D G3DSA:3.30.1120.10 414 488 5.1E-13 T 09-03-2017 BV404_RS06185 a9a9a9867789d2e872f294009c00025d 505 Gene3D G3DSA:3.40.720.10 32 413 2.3E-99 T 09-03-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 BV404_RS06185 a9a9a9867789d2e872f294009c00025d 505 Pfam PF14707 C-terminal region of aryl-sulfatase 398 459 1.6E-7 T 09-03-2017 BV404_RS06185 a9a9a9867789d2e872f294009c00025d 505 Pfam PF00884 Sulfatase 34 359 1.6E-66 T 09-03-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 BV404_RS02085 d07ec5829fbf10c952a26da7d53b13c8 343 Gene3D G3DSA:3.40.50.300 4 236 2.9E-75 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS02085 d07ec5829fbf10c952a26da7d53b13c8 343 SUPERFAMILY SSF52540 5 242 4.78E-81 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS02085 d07ec5829fbf10c952a26da7d53b13c8 343 SMART SM00382 29 214 4.8E-17 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS02085 d07ec5829fbf10c952a26da7d53b13c8 343 SUPERFAMILY SSF50331 259 342 1.36E-8 T 09-03-2017 IPR008995 Molybdate/tungstate binding, C-terminal BV404_RS02085 d07ec5829fbf10c952a26da7d53b13c8 343 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS02085 d07ec5829fbf10c952a26da7d53b13c8 343 Pfam PF00005 ABC transporter 20 164 3.7E-35 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS02085 d07ec5829fbf10c952a26da7d53b13c8 343 Pfam PF08402 TOBE domain 276 342 5.7E-8 T 09-03-2017 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 BV404_RS05135 995b2a39cb5fef6b213954aaf07fcf26 345 Gene3D G3DSA:1.10.3470.10 16 340 4.1E-96 T 09-03-2017 IPR029022 ABC transporter, BtuC-like BV404_RS05135 995b2a39cb5fef6b213954aaf07fcf26 345 SUPERFAMILY SSF81345 10 339 1.27E-77 T 09-03-2017 IPR029022 ABC transporter, BtuC-like BV404_RS05135 995b2a39cb5fef6b213954aaf07fcf26 345 Pfam PF01032 FecCD transport family 29 339 1.7E-89 T 09-03-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 BV404_RS00475 0ef33a3eab4600878937efa0a77efb14 459 SUPERFAMILY SSF47384 228 305 8.04E-13 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS00475 0ef33a3eab4600878937efa0a77efb14 459 Pfam PF00512 His Kinase A (phospho-acceptor) domain 245 304 1.7E-11 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS00475 0ef33a3eab4600878937efa0a77efb14 459 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 350 458 5.7E-19 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS00475 0ef33a3eab4600878937efa0a77efb14 459 Pfam PF00672 HAMP domain 172 237 9.4E-13 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 BV404_RS00475 0ef33a3eab4600878937efa0a77efb14 459 Gene3D G3DSA:3.30.565.10 307 458 2.6E-35 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS00475 0ef33a3eab4600878937efa0a77efb14 459 SMART SM00387 349 459 1.2E-29 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS00475 0ef33a3eab4600878937efa0a77efb14 459 SMART SM00388 243 305 7.0E-12 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS00475 0ef33a3eab4600878937efa0a77efb14 459 Gene3D G3DSA:1.10.287.130 236 301 1.0E-13 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS00475 0ef33a3eab4600878937efa0a77efb14 459 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 36 167 6.5E-57 T 09-03-2017 IPR032404 Two-component sensor protein CpxA, periplasmic domain BV404_RS00475 0ef33a3eab4600878937efa0a77efb14 459 SMART SM00304 189 242 1.1E-7 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 BV404_RS00475 0ef33a3eab4600878937efa0a77efb14 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 412 1.2E-12 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS00475 0ef33a3eab4600878937efa0a77efb14 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 1.2E-12 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS00475 0ef33a3eab4600878937efa0a77efb14 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 398 1.2E-12 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS00475 0ef33a3eab4600878937efa0a77efb14 459 SUPERFAMILY SSF55874 295 457 5.76E-34 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS03535 8f1f4ce45f057abf0d4fc3fe1101468a 376 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 375 1.8E-25 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BV404_RS03535 8f1f4ce45f057abf0d4fc3fe1101468a 376 PRINTS PR00207 Flagellin signature 37 54 1.4E-27 T 09-03-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BV404_RS03535 8f1f4ce45f057abf0d4fc3fe1101468a 376 PRINTS PR00207 Flagellin signature 76 95 1.4E-27 T 09-03-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BV404_RS03535 8f1f4ce45f057abf0d4fc3fe1101468a 376 PRINTS PR00207 Flagellin signature 111 134 1.4E-27 T 09-03-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BV404_RS03535 8f1f4ce45f057abf0d4fc3fe1101468a 376 Gene3D G3DSA:1.20.1330.10 278 332 6.9E-62 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BV404_RS03535 8f1f4ce45f057abf0d4fc3fe1101468a 376 Gene3D G3DSA:1.20.1330.10 55 171 6.9E-62 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BV404_RS03535 8f1f4ce45f057abf0d4fc3fe1101468a 376 SUPERFAMILY SSF64518 1 375 1.44E-97 T 09-03-2017 BV404_RS03535 8f1f4ce45f057abf0d4fc3fe1101468a 376 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 3.4E-44 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BV404_RS03535 8f1f4ce45f057abf0d4fc3fe1101468a 376 Pfam PF07196 Flagellin hook IN motif 193 247 7.9E-12 T 09-03-2017 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 BV404_RS02825 7628124b11f1ea5eb6d1de9bc86a3a17 377 SUPERFAMILY SSF53633 13 263 2.23E-65 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase BV404_RS02825 7628124b11f1ea5eb6d1de9bc86a3a17 377 SUPERFAMILY SSF88697 284 374 2.21E-24 T 09-03-2017 IPR015947 PUA-like domain BV404_RS02825 7628124b11f1ea5eb6d1de9bc86a3a17 377 TIGRFAM TIGR01027 proB: glutamate 5-kinase 12 374 6.6E-150 T 09-03-2017 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BV404_RS02825 7628124b11f1ea5eb6d1de9bc86a3a17 377 Pfam PF00696 Amino acid kinase family 13 241 1.0E-42 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase BV404_RS02825 7628124b11f1ea5eb6d1de9bc86a3a17 377 Gene3D G3DSA:2.30.130.10 282 373 2.5E-26 T 09-03-2017 IPR015947 PUA-like domain BV404_RS02825 7628124b11f1ea5eb6d1de9bc86a3a17 377 Gene3D G3DSA:3.40.1160.10 11 267 4.0E-58 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase BV404_RS02825 7628124b11f1ea5eb6d1de9bc86a3a17 377 SMART SM00359 284 367 1.8E-21 T 09-03-2017 IPR002478 PUA domain GO:0003723 BV404_RS02825 7628124b11f1ea5eb6d1de9bc86a3a17 377 Hamap MF_00456 Glutamate 5-kinase [proB]. 12 265 35.778 T 09-03-2017 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BV404_RS02825 7628124b11f1ea5eb6d1de9bc86a3a17 377 ProSitePatterns PS00902 Glutamate 5-kinase signature. 214 231 - T 09-03-2017 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BV404_RS02825 7628124b11f1ea5eb6d1de9bc86a3a17 377 PIRSF PIRSF000729 8 376 8.1E-140 T 09-03-2017 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 BV404_RS02825 7628124b11f1ea5eb6d1de9bc86a3a17 377 PRINTS PR00474 Glutamate 5-kinase family signature 155 182 1.4E-54 T 09-03-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 BV404_RS02825 7628124b11f1ea5eb6d1de9bc86a3a17 377 PRINTS PR00474 Glutamate 5-kinase family signature 216 236 1.4E-54 T 09-03-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 BV404_RS02825 7628124b11f1ea5eb6d1de9bc86a3a17 377 PRINTS PR00474 Glutamate 5-kinase family signature 123 144 1.4E-54 T 09-03-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 BV404_RS02825 7628124b11f1ea5eb6d1de9bc86a3a17 377 PRINTS PR00474 Glutamate 5-kinase family signature 49 63 1.4E-54 T 09-03-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 BV404_RS02825 7628124b11f1ea5eb6d1de9bc86a3a17 377 PRINTS PR00474 Glutamate 5-kinase family signature 83 111 1.4E-54 T 09-03-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 BV404_RS02825 7628124b11f1ea5eb6d1de9bc86a3a17 377 Pfam PF01472 PUA domain 284 358 1.8E-24 T 09-03-2017 IPR002478 PUA domain GO:0003723 BV404_RS06860 82a9f37475d5b06ba49bf5e115d74432 317 SUPERFAMILY SSF56327 144 306 6.2E-44 T 09-03-2017 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 BV404_RS06860 82a9f37475d5b06ba49bf5e115d74432 317 Gene3D G3DSA:3.40.50.720 1 144 2.1E-37 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS06860 82a9f37475d5b06ba49bf5e115d74432 317 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 309 2.8E-26 T 09-03-2017 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 BV404_RS06860 82a9f37475d5b06ba49bf5e115d74432 317 PIRSF PIRSF000102 1 316 5.4E-90 T 09-03-2017 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 BV404_RS06860 82a9f37475d5b06ba49bf5e115d74432 317 Gene3D G3DSA:3.90.110.10 145 310 3.2E-47 T 09-03-2017 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 BV404_RS06860 82a9f37475d5b06ba49bf5e115d74432 317 SUPERFAMILY SSF51735 1 141 1.93E-35 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS06860 82a9f37475d5b06ba49bf5e115d74432 317 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 141 3.1E-30 T 09-03-2017 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 BV404_RS06860 82a9f37475d5b06ba49bf5e115d74432 317 PRINTS PR00086 L-lactate dehydrogenase signature 140 158 2.2E-20 T 09-03-2017 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 BV404_RS06860 82a9f37475d5b06ba49bf5e115d74432 317 PRINTS PR00086 L-lactate dehydrogenase signature 2 26 2.2E-20 T 09-03-2017 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 BV404_RS06860 82a9f37475d5b06ba49bf5e115d74432 317 PRINTS PR00086 L-lactate dehydrogenase signature 27 51 2.2E-20 T 09-03-2017 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 BV404_RS06860 82a9f37475d5b06ba49bf5e115d74432 317 PRINTS PR00086 L-lactate dehydrogenase signature 116 136 2.2E-20 T 09-03-2017 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 BV404_RS06860 82a9f37475d5b06ba49bf5e115d74432 317 PRINTS PR00086 L-lactate dehydrogenase signature 170 183 2.2E-20 T 09-03-2017 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 BV404_RS11325 b9b1dc270bab5acde18dfcbc1d9d0eec 187 Pfam PF01478 Type IV leader peptidase family 6 109 1.5E-10 T 09-03-2017 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 BV404_RS03760 21d58125ca9c72ca997bfd7d50239944 548 Gene3D G3DSA:3.40.120.10 318 441 2.9E-35 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BV404_RS03760 21d58125ca9c72ca997bfd7d50239944 548 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 6.9E-17 T 09-03-2017 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BV404_RS03760 21d58125ca9c72ca997bfd7d50239944 548 SUPERFAMILY SSF53738 26 235 7.77E-52 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BV404_RS03760 21d58125ca9c72ca997bfd7d50239944 548 Gene3D G3DSA:3.40.120.10 30 225 6.1E-60 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BV404_RS03760 21d58125ca9c72ca997bfd7d50239944 548 Gene3D G3DSA:3.40.120.10 226 317 1.4E-43 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BV404_RS03760 21d58125ca9c72ca997bfd7d50239944 548 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 09-03-2017 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BV404_RS03760 21d58125ca9c72ca997bfd7d50239944 548 SUPERFAMILY SSF53738 305 446 1.45E-31 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BV404_RS03760 21d58125ca9c72ca997bfd7d50239944 548 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 438 6.4E-29 T 09-03-2017 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BV404_RS03760 21d58125ca9c72ca997bfd7d50239944 548 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 179 4.8E-40 T 09-03-2017 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BV404_RS03760 21d58125ca9c72ca997bfd7d50239944 548 SUPERFAMILY SSF53738 209 317 1.53E-7 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BV404_RS03760 21d58125ca9c72ca997bfd7d50239944 548 Gene3D G3DSA:3.30.310.50 466 544 1.1E-30 T 09-03-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BV404_RS03760 21d58125ca9c72ca997bfd7d50239944 548 SUPERFAMILY SSF55957 432 544 8.89E-20 T 09-03-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BV404_RS03760 21d58125ca9c72ca997bfd7d50239944 548 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 544 0.0 T 09-03-2017 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|MetaCyc: PWY-7343 BV404_RS03760 21d58125ca9c72ca997bfd7d50239944 548 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 490 537 7.6E-7 T 09-03-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BV404_RS12315 3785f345a4df60228ec3bcafd9dead98 199 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 193 3.4E-64 T 09-03-2017 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206|Reactome: R-HSA-15869 BV404_RS12315 3785f345a4df60228ec3bcafd9dead98 199 Gene3D G3DSA:3.90.950.10 1 196 8.7E-82 T 09-03-2017 IPR029001 Inosine triphosphate pyrophosphatase-like BV404_RS12315 3785f345a4df60228ec3bcafd9dead98 199 SUPERFAMILY SSF52972 1 195 4.97E-74 T 09-03-2017 IPR029001 Inosine triphosphate pyrophosphatase-like BV404_RS12315 3785f345a4df60228ec3bcafd9dead98 199 Pfam PF01725 Ham1 family 4 192 8.1E-56 T 09-03-2017 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206|Reactome: R-HSA-15869 BV404_RS12315 3785f345a4df60228ec3bcafd9dead98 199 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 2 196 51.452 T 09-03-2017 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 BV404_RS10405 5776c3d8e72c0a9e9a69f38952b342c5 345 Pfam PF02719 Polysaccharide biosynthesis protein 7 282 2.7E-105 T 09-03-2017 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain BV404_RS10405 5776c3d8e72c0a9e9a69f38952b342c5 345 Gene3D G3DSA:3.40.50.720 5 178 1.2E-43 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS10405 5776c3d8e72c0a9e9a69f38952b342c5 345 Gene3D G3DSA:3.90.25.10 179 265 2.1E-10 T 09-03-2017 BV404_RS10405 5776c3d8e72c0a9e9a69f38952b342c5 345 Pfam PF08485 Polysaccharide biosynthesis protein C-terminal 285 332 8.2E-26 T 09-03-2017 IPR013692 UDP-glucose 4-epimerase CapD, C-terminal domain GO:0003978|GO:0009103 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344 BV404_RS10405 5776c3d8e72c0a9e9a69f38952b342c5 345 SUPERFAMILY SSF51735 1 264 4.18E-59 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS00670 ce792a6c79d4580bc1eac9935c962463 601 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 7.9E-236 T 09-03-2017 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 BV404_RS00670 ce792a6c79d4580bc1eac9935c962463 601 SUPERFAMILY SSF46977 444 582 1.14E-44 T 09-03-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BV404_RS00670 ce792a6c79d4580bc1eac9935c962463 601 Gene3D G3DSA:3.50.50.60 2 233 1.1E-106 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS00670 ce792a6c79d4580bc1eac9935c962463 601 Gene3D G3DSA:3.50.50.60 353 416 1.1E-106 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS00670 ce792a6c79d4580bc1eac9935c962463 601 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 09-03-2017 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BV404_RS00670 ce792a6c79d4580bc1eac9935c962463 601 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 8.4E-5 T 09-03-2017 BV404_RS00670 ce792a6c79d4580bc1eac9935c962463 601 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 8.4E-5 T 09-03-2017 BV404_RS00670 ce792a6c79d4580bc1eac9935c962463 601 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 3 582 0.0 T 09-03-2017 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 BV404_RS00670 ce792a6c79d4580bc1eac9935c962463 601 Gene3D G3DSA:4.10.80.40 543 577 1.3E-16 T 09-03-2017 BV404_RS00670 ce792a6c79d4580bc1eac9935c962463 601 Gene3D G3DSA:1.20.58.100 427 537 5.6E-38 T 09-03-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BV404_RS00670 ce792a6c79d4580bc1eac9935c962463 601 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 2.6E-38 T 09-03-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BV404_RS00670 ce792a6c79d4580bc1eac9935c962463 601 Gene3D G3DSA:3.90.700.10 234 351 4.7E-35 T 09-03-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 BV404_RS00670 ce792a6c79d4580bc1eac9935c962463 601 Pfam PF00890 FAD binding domain 7 397 2.0E-112 T 09-03-2017 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 BV404_RS00670 ce792a6c79d4580bc1eac9935c962463 601 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 6.5E-9 T 09-03-2017 BV404_RS00670 ce792a6c79d4580bc1eac9935c962463 601 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 6.5E-9 T 09-03-2017 BV404_RS00670 ce792a6c79d4580bc1eac9935c962463 601 SUPERFAMILY SSF51905 361 419 3.74E-72 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS00670 ce792a6c79d4580bc1eac9935c962463 601 SUPERFAMILY SSF51905 2 250 3.74E-72 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS00670 ce792a6c79d4580bc1eac9935c962463 601 PIRSF PIRSF000171 1 575 8.2E-45 T 09-03-2017 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit Reactome: R-HSA-611105|Reactome: R-HSA-71403 BV404_RS00670 ce792a6c79d4580bc1eac9935c962463 601 SUPERFAMILY SSF56425 227 358 3.59E-41 T 09-03-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 BV404_RS07690 41fe86690e7880f9fa5dd0f7111767c9 329 Pfam PF01636 Phosphotransferase enzyme family 23 261 9.6E-27 T 09-03-2017 IPR002575 Aminoglycoside phosphotransferase BV404_RS07690 41fe86690e7880f9fa5dd0f7111767c9 329 Gene3D G3DSA:3.90.1200.10 111 300 2.1E-23 T 09-03-2017 BV404_RS07690 41fe86690e7880f9fa5dd0f7111767c9 329 SUPERFAMILY SSF56112 11 306 4.96E-40 T 09-03-2017 IPR011009 Protein kinase-like domain BV404_RS07690 41fe86690e7880f9fa5dd0f7111767c9 329 Gene3D G3DSA:3.30.200.20 8 99 1.2E-4 T 09-03-2017 BV404_RS02115 bd889dc0801a18d0ae2095130f517723 331 SUPERFAMILY SSF52540 10 262 6.41E-61 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS02115 bd889dc0801a18d0ae2095130f517723 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 328 2.3E-22 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BV404_RS02115 bd889dc0801a18d0ae2095130f517723 331 SMART SM00382 43 241 4.5E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS02115 bd889dc0801a18d0ae2095130f517723 331 Pfam PF00005 ABC transporter 35 192 3.5E-32 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS02115 bd889dc0801a18d0ae2095130f517723 331 Gene3D G3DSA:3.40.50.300 9 265 2.1E-67 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS02115 bd889dc0801a18d0ae2095130f517723 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 308 1.9E-16 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BV404_RS02115 bd889dc0801a18d0ae2095130f517723 331 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS06750 bf5323af0f74592aac9ea53e5605e31f 412 Pfam PF04303 PrpF protein 23 405 4.5E-175 T 09-03-2017 IPR007400 PrpF protein BV404_RS06750 bf5323af0f74592aac9ea53e5605e31f 412 Gene3D G3DSA:3.10.310.10 20 210 2.8E-89 T 09-03-2017 BV404_RS06750 bf5323af0f74592aac9ea53e5605e31f 412 Gene3D G3DSA:3.10.310.10 211 388 1.2E-79 T 09-03-2017 BV404_RS06750 bf5323af0f74592aac9ea53e5605e31f 412 SUPERFAMILY SSF54506 21 199 1.57E-68 T 09-03-2017 BV404_RS06750 bf5323af0f74592aac9ea53e5605e31f 412 SUPERFAMILY SSF54506 203 407 2.2E-76 T 09-03-2017 BV404_RS06750 bf5323af0f74592aac9ea53e5605e31f 412 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 22 408 6.2E-227 T 09-03-2017 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 BV404_RS01095 25269e5835eb3a5050cd39187058e11a 460 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 09-03-2017 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BV404_RS01095 25269e5835eb3a5050cd39187058e11a 460 Gene3D G3DSA:3.40.50.300 212 364 2.0E-48 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS01095 25269e5835eb3a5050cd39187058e11a 460 Pfam PF03880 DbpA RNA binding domain 387 457 6.5E-22 T 09-03-2017 IPR005580 DbpA, RNA-binding domain BV404_RS01095 25269e5835eb3a5050cd39187058e11a 460 SMART SM00487 23 220 7.2E-56 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain BV404_RS01095 25269e5835eb3a5050cd39187058e11a 460 Pfam PF00271 Helicase conserved C-terminal domain 232 338 3.3E-27 T 09-03-2017 IPR001650 Helicase, C-terminal BV404_RS01095 25269e5835eb3a5050cd39187058e11a 460 SUPERFAMILY SSF52540 73 359 8.3E-72 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS01095 25269e5835eb3a5050cd39187058e11a 460 Gene3D G3DSA:3.40.50.300 4 209 9.1E-77 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS01095 25269e5835eb3a5050cd39187058e11a 460 SMART SM00490 257 338 2.0E-29 T 09-03-2017 IPR001650 Helicase, C-terminal BV404_RS01095 25269e5835eb3a5050cd39187058e11a 460 Pfam PF00270 DEAD/DEAH box helicase 28 194 9.9E-48 T 09-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BV404_RS14030 7bbeb97f1b073c6dacc9b8c812b83419 199 SUPERFAMILY SSF52833 21 198 9.44E-44 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS14030 7bbeb97f1b073c6dacc9b8c812b83419 199 Pfam PF01323 DSBA-like thioredoxin domain 41 188 5.9E-26 T 09-03-2017 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 BV404_RS14030 7bbeb97f1b073c6dacc9b8c812b83419 199 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 09-03-2017 IPR017937 Thioredoxin, conserved site GO:0045454 BV404_RS14030 7bbeb97f1b073c6dacc9b8c812b83419 199 Gene3D G3DSA:3.40.30.10 1 117 4.3E-40 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS14030 7bbeb97f1b073c6dacc9b8c812b83419 199 Gene3D G3DSA:3.40.30.10 119 197 7.7E-23 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS14030 7bbeb97f1b073c6dacc9b8c812b83419 199 PIRSF PIRSF001488 1 199 3.5E-70 T 09-03-2017 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL BV404_RS00510 207972c6880c9a0568317c2a9936e9c4 335 Gene3D G3DSA:3.30.540.10 172 329 8.0E-44 T 09-03-2017 BV404_RS00510 207972c6880c9a0568317c2a9936e9c4 335 Gene3D G3DSA:3.30.540.10 1 171 4.9E-66 T 09-03-2017 BV404_RS00510 207972c6880c9a0568317c2a9936e9c4 335 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 321 1.7E-128 T 09-03-2017 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 BV404_RS00510 207972c6880c9a0568317c2a9936e9c4 335 SUPERFAMILY SSF56655 1 324 7.94E-107 T 09-03-2017 BV404_RS00510 207972c6880c9a0568317c2a9936e9c4 335 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 329 1.7E-165 T 09-03-2017 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 BV404_RS00510 207972c6880c9a0568317c2a9936e9c4 335 PIRSF PIRSF004532 1 331 7.3E-134 T 09-03-2017 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 BV404_RS11955 c41564c239c1fdf30649a1e902446207 311 Gene3D G3DSA:3.10.350.10 47 92 1.5E-13 T 09-03-2017 IPR018392 LysM domain BV404_RS11955 c41564c239c1fdf30649a1e902446207 311 Gene3D G3DSA:2.70.70.10 174 310 1.1E-40 T 09-03-2017 BV404_RS11955 c41564c239c1fdf30649a1e902446207 311 SMART SM00257 48 92 3.7E-11 T 09-03-2017 IPR018392 LysM domain BV404_RS11955 c41564c239c1fdf30649a1e902446207 311 Pfam PF01551 Peptidase family M23 212 306 1.8E-31 T 09-03-2017 IPR016047 Peptidase M23 BV404_RS11955 c41564c239c1fdf30649a1e902446207 311 Pfam PF01476 LysM domain 49 91 3.9E-10 T 09-03-2017 IPR018392 LysM domain BV404_RS11955 c41564c239c1fdf30649a1e902446207 311 SUPERFAMILY SSF51261 49 310 2.41E-49 T 09-03-2017 IPR011055 Duplicated hybrid motif BV404_RS13315 3156e429d62a34fa5bbcafd290d059e1 546 SMART SM00283 284 545 4.9E-67 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 BV404_RS13315 3156e429d62a34fa5bbcafd290d059e1 546 Pfam PF17200 Single Cache domain 2 41 189 2.8E-47 T 09-03-2017 IPR033480 Single Cache domain 2 BV404_RS13315 3156e429d62a34fa5bbcafd290d059e1 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 382 409 3.3E-21 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 BV404_RS13315 3156e429d62a34fa5bbcafd290d059e1 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 9 34 3.3E-21 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 BV404_RS13315 3156e429d62a34fa5bbcafd290d059e1 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 411 440 3.3E-21 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 BV404_RS13315 3156e429d62a34fa5bbcafd290d059e1 546 Gene3D G3DSA:1.10.287.950 298 515 2.7E-53 T 09-03-2017 BV404_RS13315 3156e429d62a34fa5bbcafd290d059e1 546 SUPERFAMILY SSF58104 237 546 6.15E-73 T 09-03-2017 BV404_RS13315 3156e429d62a34fa5bbcafd290d059e1 546 SMART SM00304 215 269 7.5E-9 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 BV404_RS13315 3156e429d62a34fa5bbcafd290d059e1 546 Pfam PF00672 HAMP domain 197 266 1.1E-10 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 BV404_RS13315 3156e429d62a34fa5bbcafd290d059e1 546 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 349 544 3.3E-47 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 BV404_RS13315 3156e429d62a34fa5bbcafd290d059e1 546 SMART SM01049 38 132 5.2E-41 T 09-03-2017 IPR033480 Single Cache domain 2 BV404_RS13315 3156e429d62a34fa5bbcafd290d059e1 546 Gene3D G3DSA:3.30.450.20 30 185 1.2E-58 T 09-03-2017 BV404_RS02835 18fc7dbf88fc2e3fc50e7e895f974c7d 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 90.969 T 09-03-2017 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 BV404_RS02835 18fc7dbf88fc2e3fc50e7e895f974c7d 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 1.0E-72 T 09-03-2017 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 BV404_RS02835 18fc7dbf88fc2e3fc50e7e895f974c7d 149 Pfam PF03477 ATP cone domain 50 136 7.2E-17 T 09-03-2017 IPR005144 ATP-cone domain Reactome: R-HSA-499943 BV404_RS13320 2e970a4680af51e7cf6e6fae53c11958 132 Pfam PF00376 MerR family regulatory protein 4 40 1.9E-15 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BV404_RS13320 2e970a4680af51e7cf6e6fae53c11958 132 Pfam PF09278 MerR, DNA binding 47 109 1.9E-17 T 09-03-2017 IPR015358 Transcription regulator MerR, DNA binding BV404_RS13320 2e970a4680af51e7cf6e6fae53c11958 132 Gene3D G3DSA:1.10.1660.10 58 132 3.5E-25 T 09-03-2017 BV404_RS13320 2e970a4680af51e7cf6e6fae53c11958 132 SUPERFAMILY SSF46955 2 121 1.14E-33 T 09-03-2017 IPR009061 Putative DNA-binding domain BV404_RS13320 2e970a4680af51e7cf6e6fae53c11958 132 SMART SM00422 2 71 3.8E-29 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BV404_RS13320 2e970a4680af51e7cf6e6fae53c11958 132 Gene3D G3DSA:1.10.1660.10 1 57 5.0E-27 T 09-03-2017 BV404_RS13320 2e970a4680af51e7cf6e6fae53c11958 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 1.8E-11 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BV404_RS13320 2e970a4680af51e7cf6e6fae53c11958 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 1.8E-11 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BV404_RS13320 2e970a4680af51e7cf6e6fae53c11958 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 1.8E-11 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BV404_RS13320 2e970a4680af51e7cf6e6fae53c11958 132 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 132 1.4E-65 T 09-03-2017 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 BV404_RS01320 51eff3b85513808fc9745637f6895edb 109 Pfam PF13466 STAS domain 15 93 3.8E-19 T 09-03-2017 IPR002645 STAS domain BV404_RS01320 51eff3b85513808fc9745637f6895edb 109 Gene3D G3DSA:3.30.750.24 15 96 3.2E-15 T 09-03-2017 IPR002645 STAS domain BV404_RS01320 51eff3b85513808fc9745637f6895edb 109 SUPERFAMILY SSF52091 14 98 4.91E-17 T 09-03-2017 IPR002645 STAS domain BV404_RS04220 a47ba5ab82a10c0fd225b23954b20af0 316 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 142 156 - T 09-03-2017 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 BV404_RS04220 a47ba5ab82a10c0fd225b23954b20af0 316 Pfam PF00849 RNA pseudouridylate synthase 103 249 1.0E-31 T 09-03-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BV404_RS04220 a47ba5ab82a10c0fd225b23954b20af0 316 Pfam PF01479 S4 domain 20 66 6.0E-9 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 BV404_RS04220 a47ba5ab82a10c0fd225b23954b20af0 316 Gene3D G3DSA:3.10.290.10 20 68 1.4E-7 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 BV404_RS04220 a47ba5ab82a10c0fd225b23954b20af0 316 SUPERFAMILY SSF55174 19 71 5.15E-9 T 09-03-2017 BV404_RS04220 a47ba5ab82a10c0fd225b23954b20af0 316 SUPERFAMILY SSF55120 92 312 1.18E-65 T 09-03-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 BV404_RS04220 a47ba5ab82a10c0fd225b23954b20af0 316 SMART SM00363 20 81 2.8E-8 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 BV404_RS04220 a47ba5ab82a10c0fd225b23954b20af0 316 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 313 1.6E-90 T 09-03-2017 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 BV404_RS07280 60b471bd1331a6819d0de5ac40463661 547 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 397 416 2.2E-11 T 09-03-2017 BV404_RS07280 60b471bd1331a6819d0de5ac40463661 547 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 314 330 2.2E-11 T 09-03-2017 BV404_RS07280 60b471bd1331a6819d0de5ac40463661 547 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 427 446 2.2E-11 T 09-03-2017 BV404_RS07280 60b471bd1331a6819d0de5ac40463661 547 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 457 475 2.2E-11 T 09-03-2017 BV404_RS07280 60b471bd1331a6819d0de5ac40463661 547 Pfam PF13654 AAA domain 78 288 7.6E-23 T 09-03-2017 BV404_RS07280 60b471bd1331a6819d0de5ac40463661 547 Gene3D G3DSA:3.30.230.10 306 506 1.5E-33 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BV404_RS07280 60b471bd1331a6819d0de5ac40463661 547 SUPERFAMILY SSF54211 314 506 1.25E-35 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold BV404_RS07280 60b471bd1331a6819d0de5ac40463661 547 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 400 505 1.2E-10 T 09-03-2017 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 BV404_RS11055 f0f68754cfa5314b5d4aaf3e75d72201 550 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 281 541 1.3E-75 T 09-03-2017 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 BV404_RS11055 f0f68754cfa5314b5d4aaf3e75d72201 550 SUPERFAMILY SSF161098 254 531 3.01E-35 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS11055 f0f68754cfa5314b5d4aaf3e75d72201 550 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 317 536 3.8E-16 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS11055 f0f68754cfa5314b5d4aaf3e75d72201 550 Gene3D G3DSA:1.10.3720.10 26 45 8.4E-48 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS11055 f0f68754cfa5314b5d4aaf3e75d72201 550 Gene3D G3DSA:1.10.3720.10 284 545 8.4E-48 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS05725 6532da133271df214b0b7b14fc959681 233 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 16 86 2.3E-19 T 09-03-2017 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 BV404_RS05725 6532da133271df214b0b7b14fc959681 233 PIRSF PIRSF037208 1 233 1.3E-84 T 09-03-2017 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic BV404_RS05725 6532da133271df214b0b7b14fc959681 233 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 108 226 3.0E-33 T 09-03-2017 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 BV404_RS05725 6532da133271df214b0b7b14fc959681 233 Hamap MF_00689 Putative arginyl-tRNA--protein transferase [ate]. 1 233 37.295 T 09-03-2017 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic BV404_RS05725 6532da133271df214b0b7b14fc959681 233 SUPERFAMILY SSF55729 81 232 2.65E-22 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS13530 f0556a33ae0696c388e45e3f3ffc4f40 327 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 19 323 6.9E-113 T 09-03-2017 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24 BV404_RS13530 f0556a33ae0696c388e45e3f3ffc4f40 327 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 21 314 8.8E-82 T 09-03-2017 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 BV404_RS13530 f0556a33ae0696c388e45e3f3ffc4f40 327 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 13 319 50.508 T 09-03-2017 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24 BV404_RS13530 f0556a33ae0696c388e45e3f3ffc4f40 327 PIRSF PIRSF026649 18 323 1.6E-88 T 09-03-2017 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 BV404_RS09200 43bd9b477f99e573c1f1a9067172689a 434 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 156 233 3.9E-13 T 09-03-2017 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 BV404_RS09200 43bd9b477f99e573c1f1a9067172689a 434 Hamap MF_00303 Trigger factor [tig]. 1 418 21.876 T 09-03-2017 IPR005215 Trigger factor GO:0015031 BV404_RS09200 43bd9b477f99e573c1f1a9067172689a 434 SUPERFAMILY SSF109998 248 429 2.35E-49 T 09-03-2017 IPR027304 Trigger factor/SurA domain BV404_RS09200 43bd9b477f99e573c1f1a9067172689a 434 SUPERFAMILY SSF54534 90 241 2.16E-36 T 09-03-2017 BV404_RS09200 43bd9b477f99e573c1f1a9067172689a 434 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 2.4E-43 T 09-03-2017 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 BV404_RS09200 43bd9b477f99e573c1f1a9067172689a 434 Gene3D G3DSA:3.30.70.1050 1 118 4.3E-41 T 09-03-2017 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 BV404_RS09200 43bd9b477f99e573c1f1a9067172689a 434 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 412 8.5E-40 T 09-03-2017 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 BV404_RS09200 43bd9b477f99e573c1f1a9067172689a 434 TIGRFAM TIGR00115 tig: trigger factor 11 412 9.6E-144 T 09-03-2017 IPR005215 Trigger factor GO:0015031 BV404_RS09200 43bd9b477f99e573c1f1a9067172689a 434 SUPERFAMILY SSF102735 1 130 6.41E-42 T 09-03-2017 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 BV404_RS09200 43bd9b477f99e573c1f1a9067172689a 434 Gene3D G3DSA:1.10.3120.10 216 388 8.9E-62 T 09-03-2017 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 BV404_RS09200 43bd9b477f99e573c1f1a9067172689a 434 Gene3D G3DSA:3.10.50.40 155 215 2.1E-9 T 09-03-2017 BV404_RS09200 43bd9b477f99e573c1f1a9067172689a 434 PIRSF PIRSF003095 1 433 4.3E-129 T 09-03-2017 IPR005215 Trigger factor GO:0015031 BV404_RS06490 78614029d2470b4358fd925e87c3a39f 158 Gene3D G3DSA:1.10.10.10 2 139 9.0E-38 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS06490 78614029d2470b4358fd925e87c3a39f 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 6.9E-8 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BV404_RS06490 78614029d2470b4358fd925e87c3a39f 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 6.9E-8 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BV404_RS06490 78614029d2470b4358fd925e87c3a39f 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 6.9E-8 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BV404_RS06490 78614029d2470b4358fd925e87c3a39f 158 SUPERFAMILY SSF46785 5 140 4.1E-31 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS06490 78614029d2470b4358fd925e87c3a39f 158 SMART SM00347 24 124 8.2E-23 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BV404_RS06490 78614029d2470b4358fd925e87c3a39f 158 Pfam PF01047 MarR family 31 89 1.3E-15 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BV404_RS06065 bdec104473f76f2047bf768ec8d19f38 430 Gene3D G3DSA:1.20.1600.10 105 195 3.6E-6 T 09-03-2017 BV404_RS06065 bdec104473f76f2047bf768ec8d19f38 430 SUPERFAMILY SSF111369 76 326 1.28E-15 T 09-03-2017 BV404_RS06065 bdec104473f76f2047bf768ec8d19f38 430 Gene3D G3DSA:2.40.50.100 75 104 1.9E-5 T 09-03-2017 BV404_RS06065 bdec104473f76f2047bf768ec8d19f38 430 Gene3D G3DSA:2.40.50.100 208 239 1.9E-5 T 09-03-2017 BV404_RS13785 49387054e6891329405e1157713dc9bb 1042 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 7.1E-112 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS13785 49387054e6891329405e1157713dc9bb 1042 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 7.1E-112 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS13785 49387054e6891329405e1157713dc9bb 1042 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 7.1E-112 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS13785 49387054e6891329405e1157713dc9bb 1042 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 7.1E-112 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS13785 49387054e6891329405e1157713dc9bb 1042 PRINTS PR00702 Acriflavin resistance protein family signature 554 571 7.1E-112 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS13785 49387054e6891329405e1157713dc9bb 1042 PRINTS PR00702 Acriflavin resistance protein family signature 623 637 7.1E-112 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS13785 49387054e6891329405e1157713dc9bb 1042 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 7.1E-112 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS13785 49387054e6891329405e1157713dc9bb 1042 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 7.1E-112 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS13785 49387054e6891329405e1157713dc9bb 1042 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 7.1E-112 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS13785 49387054e6891329405e1157713dc9bb 1042 Gene3D G3DSA:1.10.3850.10 816 1029 3.9E-57 T 09-03-2017 BV404_RS13785 49387054e6891329405e1157713dc9bb 1042 Pfam PF00873 AcrB/AcrD/AcrF family 1 1027 0.0 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS13785 49387054e6891329405e1157713dc9bb 1042 SUPERFAMILY SSF82714 183 272 9.81E-22 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BV404_RS13785 49387054e6891329405e1157713dc9bb 1042 Gene3D G3DSA:1.20.1640.10 291 505 6.6E-59 T 09-03-2017 BV404_RS13785 49387054e6891329405e1157713dc9bb 1042 Gene3D G3DSA:3.30.70.1430 569 673 1.2E-37 T 09-03-2017 BV404_RS13785 49387054e6891329405e1157713dc9bb 1042 Gene3D G3DSA:3.30.2090.10 723 811 2.1E-28 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BV404_RS13785 49387054e6891329405e1157713dc9bb 1042 SUPERFAMILY SSF82693 135 182 2.09E-27 T 09-03-2017 BV404_RS13785 49387054e6891329405e1157713dc9bb 1042 SUPERFAMILY SSF82693 274 330 2.09E-27 T 09-03-2017 BV404_RS13785 49387054e6891329405e1157713dc9bb 1042 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1038 0.0 T 09-03-2017 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 BV404_RS13785 49387054e6891329405e1157713dc9bb 1042 SUPERFAMILY SSF82693 674 723 4.19E-26 T 09-03-2017 BV404_RS13785 49387054e6891329405e1157713dc9bb 1042 SUPERFAMILY SSF82693 810 858 4.19E-26 T 09-03-2017 BV404_RS13785 49387054e6891329405e1157713dc9bb 1042 Gene3D G3DSA:3.30.2090.10 181 275 3.7E-27 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BV404_RS13785 49387054e6891329405e1157713dc9bb 1042 SUPERFAMILY SSF82866 296 497 7.98E-49 T 09-03-2017 BV404_RS13785 49387054e6891329405e1157713dc9bb 1042 SUPERFAMILY SSF82714 724 811 6.54E-24 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BV404_RS13785 49387054e6891329405e1157713dc9bb 1042 SUPERFAMILY SSF82693 38 132 4.76E-26 T 09-03-2017 BV404_RS13785 49387054e6891329405e1157713dc9bb 1042 Gene3D G3DSA:3.30.70.1430 38 140 2.0E-34 T 09-03-2017 BV404_RS13785 49387054e6891329405e1157713dc9bb 1042 SUPERFAMILY SSF82693 567 673 2.35E-32 T 09-03-2017 BV404_RS13785 49387054e6891329405e1157713dc9bb 1042 SUPERFAMILY SSF82866 833 1028 5.89E-43 T 09-03-2017 BV404_RS11445 032003b0158ca83b5dde04cd508a6ca2 476 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 441 1.4E-164 T 09-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BV404_RS11445 032003b0158ca83b5dde04cd508a6ca2 476 PRINTS PR00175 Sodium/alanine symporter signature 206 225 6.3E-59 T 09-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BV404_RS11445 032003b0158ca83b5dde04cd508a6ca2 476 PRINTS PR00175 Sodium/alanine symporter signature 410 430 6.3E-59 T 09-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BV404_RS11445 032003b0158ca83b5dde04cd508a6ca2 476 PRINTS PR00175 Sodium/alanine symporter signature 178 196 6.3E-59 T 09-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BV404_RS11445 032003b0158ca83b5dde04cd508a6ca2 476 PRINTS PR00175 Sodium/alanine symporter signature 87 109 6.3E-59 T 09-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BV404_RS11445 032003b0158ca83b5dde04cd508a6ca2 476 PRINTS PR00175 Sodium/alanine symporter signature 349 371 6.3E-59 T 09-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BV404_RS11445 032003b0158ca83b5dde04cd508a6ca2 476 PRINTS PR00175 Sodium/alanine symporter signature 303 321 6.3E-59 T 09-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BV404_RS11445 032003b0158ca83b5dde04cd508a6ca2 476 Pfam PF01235 Sodium:alanine symporter family 48 453 3.3E-164 T 09-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BV404_RS12805 99a4d7c99f802633eedc6327e6ac864e 550 Gene3D G3DSA:1.10.1390.10 508 549 4.8E-21 T 09-03-2017 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS12805 99a4d7c99f802633eedc6327e6ac864e 550 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 498 515 - T 09-03-2017 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS12805 99a4d7c99f802633eedc6327e6ac864e 550 Gene3D G3DSA:3.40.50.10490 9 99 1.4E-147 T 09-03-2017 BV404_RS12805 99a4d7c99f802633eedc6327e6ac864e 550 Gene3D G3DSA:3.40.50.10490 294 507 1.4E-147 T 09-03-2017 BV404_RS12805 99a4d7c99f802633eedc6327e6ac864e 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 466 484 1.3E-55 T 09-03-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS12805 99a4d7c99f802633eedc6327e6ac864e 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 151 170 1.3E-55 T 09-03-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS12805 99a4d7c99f802633eedc6327e6ac864e 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 262 280 1.3E-55 T 09-03-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS12805 99a4d7c99f802633eedc6327e6ac864e 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 498 511 1.3E-55 T 09-03-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS12805 99a4d7c99f802633eedc6327e6ac864e 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 484 498 1.3E-55 T 09-03-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS12805 99a4d7c99f802633eedc6327e6ac864e 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 339 360 1.3E-55 T 09-03-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS12805 99a4d7c99f802633eedc6327e6ac864e 550 Gene3D G3DSA:3.40.50.10490 100 291 6.1E-90 T 09-03-2017 BV404_RS12805 99a4d7c99f802633eedc6327e6ac864e 550 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 266 279 - T 09-03-2017 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS12805 99a4d7c99f802633eedc6327e6ac864e 550 Pfam PF00342 Phosphoglucose isomerase 53 542 1.0E-254 T 09-03-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS12805 99a4d7c99f802633eedc6327e6ac864e 550 SUPERFAMILY SSF53697 6 549 1.39E-223 T 09-03-2017 BV404_RS12805 99a4d7c99f802633eedc6327e6ac864e 550 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 47 525 42.57 T 09-03-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS05670 7f86a35985a3589162585ebcd657bb0c 357 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 4 357 54.212 T 09-03-2017 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 BV404_RS05670 7f86a35985a3589162585ebcd657bb0c 357 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 321 333 - T 09-03-2017 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 BV404_RS05670 7f86a35985a3589162585ebcd657bb0c 357 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 228 241 - T 09-03-2017 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 BV404_RS05670 7f86a35985a3589162585ebcd657bb0c 357 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 5 164 2.1E-79 T 09-03-2017 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 BV404_RS05670 7f86a35985a3589162585ebcd657bb0c 357 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 198 339 1.8E-66 T 09-03-2017 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 BV404_RS05670 7f86a35985a3589162585ebcd657bb0c 357 SUPERFAMILY SSF56784 4 159 2.94E-40 T 09-03-2017 IPR023214 HAD-like domain BV404_RS05670 7f86a35985a3589162585ebcd657bb0c 357 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 6 151 1.1E-28 T 09-03-2017 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 BV404_RS05670 7f86a35985a3589162585ebcd657bb0c 357 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 147 2.1E-48 T 09-03-2017 IPR006543 Histidinol-phosphate phosphatase GO:0016791 BV404_RS05670 7f86a35985a3589162585ebcd657bb0c 357 SUPERFAMILY SSF54211 254 344 1.39E-31 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold BV404_RS05670 7f86a35985a3589162585ebcd657bb0c 357 Pfam PF08645 Polynucleotide kinase 3 phosphatase 6 132 3.1E-6 T 09-03-2017 IPR013954 Polynucleotide kinase 3 phosphatase Reactome: R-HSA-5649702 BV404_RS05670 7f86a35985a3589162585ebcd657bb0c 357 Gene3D G3DSA:3.40.50.1000 3 162 1.2E-43 T 09-03-2017 IPR023214 HAD-like domain BV404_RS05670 7f86a35985a3589162585ebcd657bb0c 357 Gene3D G3DSA:3.30.230.40 259 357 1.2E-31 T 09-03-2017 BV404_RS05670 7f86a35985a3589162585ebcd657bb0c 357 Gene3D G3DSA:3.30.230.40 169 255 1.1E-38 T 09-03-2017 BV404_RS05670 7f86a35985a3589162585ebcd657bb0c 357 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 169 357 38.341 T 09-03-2017 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 BV404_RS05670 7f86a35985a3589162585ebcd657bb0c 357 SUPERFAMILY SSF54211 169 253 3.41E-33 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold BV404_RS05550 38563dd85c4f00a98b8430809f0eabd2 429 SUPERFAMILY SSF53383 4 419 4.48E-132 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase BV404_RS05550 38563dd85c4f00a98b8430809f0eabd2 429 PIRSF PIRSF000521 22 421 1.8E-38 T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BV404_RS05550 38563dd85c4f00a98b8430809f0eabd2 429 Pfam PF00202 Aminotransferase class-III 24 418 6.9E-129 T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BV404_RS05550 38563dd85c4f00a98b8430809f0eabd2 429 Gene3D G3DSA:3.90.1150.10 329 419 1.1E-53 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 BV404_RS05550 38563dd85c4f00a98b8430809f0eabd2 429 Gene3D G3DSA:3.90.1150.10 3 58 1.1E-53 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 BV404_RS05550 38563dd85c4f00a98b8430809f0eabd2 429 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 239 276 - T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BV404_RS05550 38563dd85c4f00a98b8430809f0eabd2 429 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 421 47.789 T 09-03-2017 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 BV404_RS05550 38563dd85c4f00a98b8430809f0eabd2 429 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 10 418 2.5E-177 T 09-03-2017 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 BV404_RS05550 38563dd85c4f00a98b8430809f0eabd2 429 Gene3D G3DSA:3.40.640.10 59 326 4.5E-93 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 BV404_RS08565 8714ea076b560a4ec83a94033549ca49 216 Pfam PF00043 Glutathione S-transferase, C-terminal domain 127 195 2.7E-8 T 09-03-2017 IPR004046 Glutathione S-transferase, C-terminal BV404_RS08565 8714ea076b560a4ec83a94033549ca49 216 SUPERFAMILY SSF47616 71 208 7.8E-22 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like BV404_RS08565 8714ea076b560a4ec83a94033549ca49 216 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 72 1.4E-14 T 09-03-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 BV404_RS08565 8714ea076b560a4ec83a94033549ca49 216 Gene3D G3DSA:3.40.30.10 3 84 3.0E-27 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS08565 8714ea076b560a4ec83a94033549ca49 216 SUPERFAMILY SSF52833 2 84 7.63E-25 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS08565 8714ea076b560a4ec83a94033549ca49 216 Gene3D G3DSA:1.20.1050.10 85 192 1.6E-19 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like BV404_RS08530 5284e9800adc9d36bb41c40a587e45c9 303 Pfam PF03466 LysR substrate binding domain 89 293 1.2E-40 T 09-03-2017 IPR005119 LysR, substrate-binding BV404_RS08530 5284e9800adc9d36bb41c40a587e45c9 303 Gene3D G3DSA:3.40.190.10 90 180 4.7E-13 T 09-03-2017 BV404_RS08530 5284e9800adc9d36bb41c40a587e45c9 303 Gene3D G3DSA:3.40.190.10 181 266 5.6E-18 T 09-03-2017 BV404_RS08530 5284e9800adc9d36bb41c40a587e45c9 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.7E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS08530 5284e9800adc9d36bb41c40a587e45c9 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.7E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS08530 5284e9800adc9d36bb41c40a587e45c9 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.7E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS08530 5284e9800adc9d36bb41c40a587e45c9 303 SUPERFAMILY SSF46785 1 112 1.36E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS08530 5284e9800adc9d36bb41c40a587e45c9 303 SUPERFAMILY SSF53850 89 296 1.33E-39 T 09-03-2017 BV404_RS08530 5284e9800adc9d36bb41c40a587e45c9 303 Gene3D G3DSA:1.10.10.10 1 87 2.9E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS08530 5284e9800adc9d36bb41c40a587e45c9 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.9E-17 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS11630 4dc5765671e1d680be49ecb468a118a9 152 Pfam PF05258 Protein of unknown function (DUF721) 11 89 1.5E-10 T 09-03-2017 IPR007922 Protein of unknown function DUF721/UPF0232 BV404_RS04935 fb6ec5a0baf5b90ff3b044b565f66ac5 221 SMART SM00448 1 112 7.1E-36 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS04935 fb6ec5a0baf5b90ff3b044b565f66ac5 221 SMART SM00862 145 217 3.6E-20 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BV404_RS04935 fb6ec5a0baf5b90ff3b044b565f66ac5 221 Gene3D G3DSA:1.10.10.10 123 218 5.7E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS04935 fb6ec5a0baf5b90ff3b044b565f66ac5 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 1.3E-18 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BV404_RS04935 fb6ec5a0baf5b90ff3b044b565f66ac5 221 Pfam PF00072 Response regulator receiver domain 3 113 1.9E-25 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS04935 fb6ec5a0baf5b90ff3b044b565f66ac5 221 Gene3D G3DSA:3.40.50.2300 1 120 5.8E-36 T 09-03-2017 BV404_RS04935 fb6ec5a0baf5b90ff3b044b565f66ac5 221 SUPERFAMILY SSF52172 1 175 1.28E-35 T 09-03-2017 IPR011006 CheY-like superfamily BV404_RS11755 dea1436adb38c1df2862288fc0134011 197 Pfam PF00355 Rieske [2Fe-2S] domain 55 174 8.9E-12 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 BV404_RS11755 dea1436adb38c1df2862288fc0134011 197 SUPERFAMILY SSF50022 30 192 4.41E-44 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 BV404_RS11755 dea1436adb38c1df2862288fc0134011 197 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 4 40 2.6E-15 T 09-03-2017 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 BV404_RS11755 dea1436adb38c1df2862288fc0134011 197 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 190 1.5E-76 T 09-03-2017 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 BV404_RS11755 dea1436adb38c1df2862288fc0134011 197 Gene3D G3DSA:2.102.10.10 9 192 1.2E-42 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 BV404_RS11755 dea1436adb38c1df2862288fc0134011 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 149 161 1.3E-7 T 09-03-2017 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 BV404_RS11755 dea1436adb38c1df2862288fc0134011 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 119 130 1.3E-7 T 09-03-2017 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 BV404_RS11755 dea1436adb38c1df2862288fc0134011 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 162 174 1.3E-7 T 09-03-2017 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 BV404_RS09650 be2c7bfc689d1cfe229bcc8cee60de53 253 Gene3D G3DSA:3.40.50.1580 4 251 1.0E-84 T 09-03-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 BV404_RS09650 be2c7bfc689d1cfe229bcc8cee60de53 253 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 5 251 4.8E-111 T 09-03-2017 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3 BV404_RS09650 be2c7bfc689d1cfe229bcc8cee60de53 253 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 65 80 - T 09-03-2017 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 BV404_RS09650 be2c7bfc689d1cfe229bcc8cee60de53 253 SUPERFAMILY SSF53167 4 251 1.31E-72 T 09-03-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 BV404_RS09650 be2c7bfc689d1cfe229bcc8cee60de53 253 Pfam PF01048 Phosphorylase superfamily 20 250 3.9E-40 T 09-03-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 BV404_RS08630 cd26e61b0a80fbc3c4e42c9333c5cceb 531 Gene3D G3DSA:3.40.50.300 132 281 6.9E-48 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS08630 cd26e61b0a80fbc3c4e42c9333c5cceb 531 Gene3D G3DSA:3.40.50.300 4 100 6.9E-48 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS08630 cd26e61b0a80fbc3c4e42c9333c5cceb 531 Pfam PF00005 ABC transporter 18 184 1.6E-21 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS08630 cd26e61b0a80fbc3c4e42c9333c5cceb 531 Pfam PF00005 ABC transporter 336 467 2.3E-21 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS08630 cd26e61b0a80fbc3c4e42c9333c5cceb 531 SUPERFAMILY SSF52540 4 239 1.23E-44 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS08630 cd26e61b0a80fbc3c4e42c9333c5cceb 531 SMART SM00382 344 512 9.5E-10 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS08630 cd26e61b0a80fbc3c4e42c9333c5cceb 531 SMART SM00382 26 238 5.0E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS08630 cd26e61b0a80fbc3c4e42c9333c5cceb 531 Gene3D G3DSA:3.40.50.300 318 528 5.3E-44 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS08630 cd26e61b0a80fbc3c4e42c9333c5cceb 531 Pfam PF12848 ABC transporter 224 309 9.7E-22 T 09-03-2017 IPR032781 ABC-transporter extension domain BV404_RS08630 cd26e61b0a80fbc3c4e42c9333c5cceb 531 SUPERFAMILY SSF52540 297 528 2.96E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS02845 9da177280fc78f6b2d4ec8828d15ac58 217 Pfam PF00677 Lumazine binding domain 3 87 4.6E-20 T 09-03-2017 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BV404_RS02845 9da177280fc78f6b2d4ec8828d15ac58 217 Pfam PF00677 Lumazine binding domain 100 184 1.8E-21 T 09-03-2017 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BV404_RS02845 9da177280fc78f6b2d4ec8828d15ac58 217 Gene3D G3DSA:2.40.30.20 5 104 1.7E-30 T 09-03-2017 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 BV404_RS02845 9da177280fc78f6b2d4ec8828d15ac58 217 Gene3D G3DSA:2.40.30.20 105 195 3.6E-32 T 09-03-2017 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 BV404_RS02845 9da177280fc78f6b2d4ec8828d15ac58 217 SUPERFAMILY SSF63380 1 89 5.78E-25 T 09-03-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 BV404_RS02845 9da177280fc78f6b2d4ec8828d15ac58 217 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 200 2.4E-67 T 09-03-2017 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BV404_RS02845 9da177280fc78f6b2d4ec8828d15ac58 217 SUPERFAMILY SSF63380 93 196 5.87E-33 T 09-03-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 BV404_RS02845 9da177280fc78f6b2d4ec8828d15ac58 217 PIRSF PIRSF000498 1 211 2.7E-79 T 09-03-2017 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BV404_RS11795 db0b694f6af7c6bccd8f0c8e9554540b 117 PIRSF PIRSF002191 1 117 7.0E-52 T 09-03-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS11795 db0b694f6af7c6bccd8f0c8e9554540b 117 Pfam PF01245 Ribosomal protein L19 3 113 3.0E-51 T 09-03-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS11795 db0b694f6af7c6bccd8f0c8e9554540b 117 SUPERFAMILY SSF50104 2 115 3.01E-48 T 09-03-2017 IPR008991 Translation protein SH3-like domain BV404_RS11795 db0b694f6af7c6bccd8f0c8e9554540b 117 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 09-03-2017 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS11795 db0b694f6af7c6bccd8f0c8e9554540b 117 PRINTS PR00061 Ribosomal protein L19 signature 34 63 6.5E-42 T 09-03-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS11795 db0b694f6af7c6bccd8f0c8e9554540b 117 PRINTS PR00061 Ribosomal protein L19 signature 4 33 6.5E-42 T 09-03-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS11795 db0b694f6af7c6bccd8f0c8e9554540b 117 PRINTS PR00061 Ribosomal protein L19 signature 88 113 6.5E-42 T 09-03-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS11795 db0b694f6af7c6bccd8f0c8e9554540b 117 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 1.3E-52 T 09-03-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS11795 db0b694f6af7c6bccd8f0c8e9554540b 117 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 31.306 T 09-03-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS13855 5ea71346203353059bb5858d899e2458 368 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 353 2.6E-73 T 09-03-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 BV404_RS13855 5ea71346203353059bb5858d899e2458 368 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 62 269 6.5E-29 T 09-03-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BV404_RS13855 5ea71346203353059bb5858d899e2458 368 Gene3D G3DSA:2.40.50.100 70 102 1.3E-13 T 09-03-2017 BV404_RS13855 5ea71346203353059bb5858d899e2458 368 Gene3D G3DSA:2.40.50.100 163 194 1.3E-13 T 09-03-2017 BV404_RS13855 5ea71346203353059bb5858d899e2458 368 SUPERFAMILY SSF111369 58 273 7.19E-39 T 09-03-2017 BV404_RS13855 5ea71346203353059bb5858d899e2458 368 Pfam PF00529 HlyD membrane-fusion protein of T1SS 71 253 1.8E-7 T 09-03-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 BV404_RS00135 a3d4381fab23d5b243fb1e21be38e67a 348 SMART SM00387 233 348 9.4E-29 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS00135 a3d4381fab23d5b243fb1e21be38e67a 348 Gene3D G3DSA:1.10.287.130 124 186 9.4E-12 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS00135 a3d4381fab23d5b243fb1e21be38e67a 348 SUPERFAMILY SSF47384 125 190 1.26E-12 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS00135 a3d4381fab23d5b243fb1e21be38e67a 348 SMART SM00091 4 72 1.2E-6 T 09-03-2017 IPR000014 PAS domain BV404_RS00135 a3d4381fab23d5b243fb1e21be38e67a 348 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 237 347 7.0E-18 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS00135 a3d4381fab23d5b243fb1e21be38e67a 348 SUPERFAMILY SSF55874 198 347 1.44E-36 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS00135 a3d4381fab23d5b243fb1e21be38e67a 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 311 329 1.1E-11 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS00135 a3d4381fab23d5b243fb1e21be38e67a 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 282 296 1.1E-11 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS00135 a3d4381fab23d5b243fb1e21be38e67a 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 347 1.1E-11 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS00135 a3d4381fab23d5b243fb1e21be38e67a 348 Gene3D G3DSA:3.30.565.10 196 348 9.3E-36 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS00135 a3d4381fab23d5b243fb1e21be38e67a 348 Pfam PF00989 PAS fold 7 111 9.1E-17 T 09-03-2017 IPR013767 PAS fold GO:0006355 BV404_RS00135 a3d4381fab23d5b243fb1e21be38e67a 348 SUPERFAMILY SSF55785 4 97 3.05E-10 T 09-03-2017 IPR000014 PAS domain BV404_RS00135 a3d4381fab23d5b243fb1e21be38e67a 348 Pfam PF00512 His Kinase A (phospho-acceptor) domain 133 189 9.4E-15 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS00135 a3d4381fab23d5b243fb1e21be38e67a 348 SMART SM00388 129 194 2.0E-13 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS00135 a3d4381fab23d5b243fb1e21be38e67a 348 Gene3D G3DSA:3.30.450.20 3 111 7.1E-28 T 09-03-2017 BV404_RS00135 a3d4381fab23d5b243fb1e21be38e67a 348 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 7 121 1.2E-6 T 09-03-2017 IPR000014 PAS domain BV404_RS11850 cb09b65dc0434bd47c8cd877b969cc99 153 Pfam PF09335 SNARE associated Golgi protein 49 149 3.5E-11 T 09-03-2017 IPR032816 SNARE associated Golgi protein BV404_RS13740 46d433f4bc71710e3a1148341f008379 255 Pfam PF09836 Putative DNA-binding domain 5 95 2.4E-21 T 09-03-2017 IPR018640 Putative DNA-binding domain, bacteria BV404_RS12930 8ef1c17f10d9ac7fb937941801494090 429 Hamap MF_00900 GTPase HflX [hflX]. 27 390 46.049 T 09-03-2017 IPR016496 GTPase HflX GO:0005525 BV404_RS12930 8ef1c17f10d9ac7fb937941801494090 429 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 3.3E-156 T 09-03-2017 IPR016496 GTPase HflX GO:0005525 BV404_RS12930 8ef1c17f10d9ac7fb937941801494090 429 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 2.8E-31 T 09-03-2017 IPR025121 GTPase HflX, N-terminal BV404_RS12930 8ef1c17f10d9ac7fb937941801494090 429 SUPERFAMILY SSF54980 366 428 4.6E-17 T 09-03-2017 IPR009022 Elongation factor G, III-V domain BV404_RS12930 8ef1c17f10d9ac7fb937941801494090 429 SUPERFAMILY SSF52540 197 371 1.84E-42 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS12930 8ef1c17f10d9ac7fb937941801494090 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 2.6E-10 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 BV404_RS12930 8ef1c17f10d9ac7fb937941801494090 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 2.6E-10 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 BV404_RS12930 8ef1c17f10d9ac7fb937941801494090 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 2.6E-10 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 BV404_RS12930 8ef1c17f10d9ac7fb937941801494090 429 PIRSF PIRSF006809 3 423 1.8E-151 T 09-03-2017 IPR016496 GTPase HflX GO:0005525 BV404_RS12930 8ef1c17f10d9ac7fb937941801494090 429 Pfam PF01926 50S ribosome-binding GTPase 200 318 2.1E-21 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 BV404_RS12930 8ef1c17f10d9ac7fb937941801494090 429 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 5.3E-28 T 09-03-2017 IPR032305 GTP-binding protein, middle domain BV404_RS12930 8ef1c17f10d9ac7fb937941801494090 429 Gene3D G3DSA:3.40.50.300 197 361 2.5E-36 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS02960 f6438a3a63b9e639fc8880640f8e31e4 206 Pfam PF01351 Ribonuclease HII 22 197 9.1E-39 T 09-03-2017 IPR024567 Ribonuclease HII/HIII domain BV404_RS02960 f6438a3a63b9e639fc8880640f8e31e4 206 Gene3D G3DSA:3.30.420.10 20 161 2.7E-49 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 BV404_RS02960 f6438a3a63b9e639fc8880640f8e31e4 206 SUPERFAMILY SSF53098 15 204 5.92E-70 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 BV404_RS02960 f6438a3a63b9e639fc8880640f8e31e4 206 Hamap MF_00052_B Ribonuclease HII [rnhB]. 20 199 38.083 T 09-03-2017 IPR022898 Ribonuclease HII GO:0004523 BV404_RS03165 c24f7fb996f0a456f18afd7926a14c28 247 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 113 246 2.5E-37 T 09-03-2017 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal BV404_RS03165 c24f7fb996f0a456f18afd7926a14c28 247 SMART SM00858 125 187 6.0E-7 T 09-03-2017 IPR013974 SAF domain Reactome: R-HSA-4085001 BV404_RS03165 c24f7fb996f0a456f18afd7926a14c28 247 Pfam PF13144 Chaperone for flagella basal body P-ring formation 48 245 1.6E-50 T 09-03-2017 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal BV404_RS02660 0bc23408d163a01ba093eee069e0a335 240 Gene3D G3DSA:3.40.109.10 1 238 5.9E-74 T 09-03-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BV404_RS02660 0bc23408d163a01ba093eee069e0a335 240 SUPERFAMILY SSF55469 1 238 1.44E-70 T 09-03-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BV404_RS02660 0bc23408d163a01ba093eee069e0a335 240 Pfam PF00881 Nitroreductase family 8 159 1.5E-20 T 09-03-2017 IPR029479 Nitroreductase Reactome: R-HSA-209968 BV404_RS02660 0bc23408d163a01ba093eee069e0a335 240 PIRSF PIRSF005426 1 240 3.2E-80 T 09-03-2017 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 BV404_RS05795 5afa0888b4d9c97059bf934c63ec1c81 215 Pfam PF02613 Nitrate reductase delta subunit 51 182 2.0E-41 T 09-03-2017 IPR020945 DMSO/Nitrate reductase chaperone BV404_RS05795 5afa0888b4d9c97059bf934c63ec1c81 215 SUPERFAMILY SSF89155 8 212 4.97E-53 T 09-03-2017 IPR020945 DMSO/Nitrate reductase chaperone BV404_RS05795 5afa0888b4d9c97059bf934c63ec1c81 215 Gene3D G3DSA:1.10.3480.10 2 213 1.5E-51 T 09-03-2017 IPR020945 DMSO/Nitrate reductase chaperone BV404_RS05795 5afa0888b4d9c97059bf934c63ec1c81 215 Hamap MF_01150 Chaperone protein TorD [torD]. 3 212 34.364 T 09-03-2017 IPR023069 Chaperone TorD BV404_RS02735 cc8a9f7cc1d92e791354becf3292b876 354 Hamap MF_01113 DNA polymerase IV [dinB]. 5 353 37.168 T 09-03-2017 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 BV404_RS02735 cc8a9f7cc1d92e791354becf3292b876 354 Gene3D G3DSA:1.10.150.20 169 238 1.2E-21 T 09-03-2017 BV404_RS02735 cc8a9f7cc1d92e791354becf3292b876 354 Gene3D G3DSA:3.30.70.270 70 168 1.1E-33 T 09-03-2017 BV404_RS02735 cc8a9f7cc1d92e791354becf3292b876 354 SUPERFAMILY SSF100879 245 353 1.81E-24 T 09-03-2017 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 BV404_RS02735 cc8a9f7cc1d92e791354becf3292b876 354 Pfam PF11799 impB/mucB/samB family C-terminal domain 241 340 1.7E-5 T 09-03-2017 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 BV404_RS02735 cc8a9f7cc1d92e791354becf3292b876 354 Pfam PF00817 impB/mucB/samB family 11 158 5.5E-49 T 09-03-2017 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 BV404_RS02735 cc8a9f7cc1d92e791354becf3292b876 354 SUPERFAMILY SSF56672 4 238 1.25E-91 T 09-03-2017 BV404_RS02735 cc8a9f7cc1d92e791354becf3292b876 354 Pfam PF11798 IMS family HHH motif 170 200 5.3E-6 T 09-03-2017 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 BV404_RS02735 cc8a9f7cc1d92e791354becf3292b876 354 Gene3D G3DSA:3.30.1490.100 241 354 3.2E-41 T 09-03-2017 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 BV404_RS06505 25a744c9e99db240ecc394874b7332fe 238 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 43 229 1.1E-24 T 09-03-2017 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS06505 25a744c9e99db240ecc394874b7332fe 238 Gene3D G3DSA:3.30.420.10 41 229 8.1E-46 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 BV404_RS06505 25a744c9e99db240ecc394874b7332fe 238 SUPERFAMILY SSF53098 40 227 1.71E-39 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 BV404_RS06505 25a744c9e99db240ecc394874b7332fe 238 SMART SM00479 47 228 3.6E-23 T 09-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III BV404_RS06505 25a744c9e99db240ecc394874b7332fe 238 Pfam PF00929 Exonuclease 49 219 9.3E-15 T 09-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III BV404_RS14805 f12c080011e5c24159b3ef1dbc24bee0 322 Pfam PF02687 FtsX-like permease family 199 317 6.0E-12 T 09-03-2017 IPR003838 ABC transporter permease protein domain GO:0016020 BV404_RS14805 f12c080011e5c24159b3ef1dbc24bee0 322 PIRSF PIRSF003097 24 318 1.8E-62 T 09-03-2017 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 BV404_RS12615 a0d277e2a600d76e7229be13b6570a0e 364 Gene3D G3DSA:1.25.40.10 173 333 2.4E-15 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BV404_RS12615 a0d277e2a600d76e7229be13b6570a0e 364 SUPERFAMILY SSF48452 174 334 2.07E-13 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BV404_RS12615 a0d277e2a600d76e7229be13b6570a0e 364 Pfam PF14559 Tetratricopeptide repeat 183 239 1.3E-5 T 09-03-2017 BV404_RS09260 51e7ca1bdfba5d89ebf39930ed4d7b70 489 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 5 475 45.017 T 09-03-2017 IPR003846 Uncharacterised protein family UPF0061 BV404_RS09260 51e7ca1bdfba5d89ebf39930ed4d7b70 489 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 9 457 6.8E-154 T 09-03-2017 IPR003846 Uncharacterised protein family UPF0061 BV404_RS10075 6bef03d0513d53c0ec4384e9546b30be 154 Gene3D G3DSA:3.40.390.30 18 151 3.1E-49 T 09-03-2017 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 BV404_RS10075 6bef03d0513d53c0ec4384e9546b30be 154 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 39 143 4.8E-37 T 09-03-2017 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 BV404_RS10075 6bef03d0513d53c0ec4384e9546b30be 154 SUPERFAMILY SSF55486 3 149 1.71E-49 T 09-03-2017 BV404_RS10075 6bef03d0513d53c0ec4384e9546b30be 154 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 113 123 - T 09-03-2017 IPR020549 Endoribonuclease YbeY, conserved site BV404_RS10075 6bef03d0513d53c0ec4384e9546b30be 154 Pfam PF02130 Uncharacterized protein family UPF0054 25 142 8.3E-38 T 09-03-2017 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 BV404_RS10075 6bef03d0513d53c0ec4384e9546b30be 154 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 147 24.293 T 09-03-2017 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 BV404_RS08365 603afe8c9af4c47fbac4a0edafdad2a5 146 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 1.2E-13 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BV404_RS08365 603afe8c9af4c47fbac4a0edafdad2a5 146 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 1.2E-13 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BV404_RS08365 603afe8c9af4c47fbac4a0edafdad2a5 146 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 1.2E-13 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BV404_RS08365 603afe8c9af4c47fbac4a0edafdad2a5 146 SUPERFAMILY SSF46955 3 125 4.76E-29 T 09-03-2017 IPR009061 Putative DNA-binding domain BV404_RS08365 603afe8c9af4c47fbac4a0edafdad2a5 146 Gene3D G3DSA:1.10.1660.10 57 124 6.9E-14 T 09-03-2017 BV404_RS08365 603afe8c9af4c47fbac4a0edafdad2a5 146 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 28 - T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BV404_RS08365 603afe8c9af4c47fbac4a0edafdad2a5 146 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 2 142 1.4E-68 T 09-03-2017 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 BV404_RS08365 603afe8c9af4c47fbac4a0edafdad2a5 146 Gene3D G3DSA:1.10.1660.10 2 56 1.2E-21 T 09-03-2017 BV404_RS08365 603afe8c9af4c47fbac4a0edafdad2a5 146 SMART SM00422 3 71 7.8E-24 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BV404_RS08365 603afe8c9af4c47fbac4a0edafdad2a5 146 Pfam PF13411 MerR HTH family regulatory protein 3 69 2.1E-16 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BV404_RS11610 cd66dfbf2f66961ab764f9751d6bb56c 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 4.8E-11 T 09-03-2017 BV404_RS11610 cd66dfbf2f66961ab764f9751d6bb56c 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 4.8E-11 T 09-03-2017 BV404_RS11610 cd66dfbf2f66961ab764f9751d6bb56c 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 4.8E-11 T 09-03-2017 BV404_RS11610 cd66dfbf2f66961ab764f9751d6bb56c 379 Gene3D G3DSA:3.50.30.20 4 145 1.1E-63 T 09-03-2017 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 BV404_RS11610 cd66dfbf2f66961ab764f9751d6bb56c 379 SUPERFAMILY SSF52317 153 377 1.45E-63 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like BV404_RS11610 cd66dfbf2f66961ab764f9751d6bb56c 379 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 48.683 T 09-03-2017 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 BV404_RS11610 cd66dfbf2f66961ab764f9751d6bb56c 379 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.5E-5 T 09-03-2017 BV404_RS11610 cd66dfbf2f66961ab764f9751d6bb56c 379 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.5E-5 T 09-03-2017 BV404_RS11610 cd66dfbf2f66961ab764f9751d6bb56c 379 PRINTS PR00097 Anthranilate synthase component II signature 236 245 1.5E-5 T 09-03-2017 BV404_RS11610 cd66dfbf2f66961ab764f9751d6bb56c 379 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 375 4.0E-149 T 09-03-2017 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 BV404_RS11610 cd66dfbf2f66961ab764f9751d6bb56c 379 SMART SM01097 3 133 2.4E-94 T 09-03-2017 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 BV404_RS11610 cd66dfbf2f66961ab764f9751d6bb56c 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 6.8E-40 T 09-03-2017 BV404_RS11610 cd66dfbf2f66961ab764f9751d6bb56c 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 6.8E-40 T 09-03-2017 BV404_RS11610 cd66dfbf2f66961ab764f9751d6bb56c 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 6.8E-40 T 09-03-2017 BV404_RS11610 cd66dfbf2f66961ab764f9751d6bb56c 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 6.8E-40 T 09-03-2017 BV404_RS11610 cd66dfbf2f66961ab764f9751d6bb56c 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 6.8E-40 T 09-03-2017 BV404_RS11610 cd66dfbf2f66961ab764f9751d6bb56c 379 Gene3D G3DSA:3.40.50.880 154 378 6.9E-83 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like BV404_RS11610 cd66dfbf2f66961ab764f9751d6bb56c 379 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 1.2E-53 T 09-03-2017 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 BV404_RS11610 cd66dfbf2f66961ab764f9751d6bb56c 379 Pfam PF00117 Glutamine amidotransferase class-I 197 372 5.6E-47 T 09-03-2017 IPR017926 Glutamine amidotransferase BV404_RS11610 cd66dfbf2f66961ab764f9751d6bb56c 379 SUPERFAMILY SSF52021 4 142 4.18E-58 T 09-03-2017 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 BV404_RS13935 6159aeb62d605b0dddbaca3affa23c63 304 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 281 56.065 T 09-03-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BV404_RS13935 6159aeb62d605b0dddbaca3affa23c63 304 PIRSF PIRSF000166 2 304 3.2E-126 T 09-03-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BV404_RS13935 6159aeb62d605b0dddbaca3affa23c63 304 Pfam PF01218 Coproporphyrinogen III oxidase 9 304 1.5E-129 T 09-03-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BV404_RS13935 6159aeb62d605b0dddbaca3affa23c63 304 Gene3D G3DSA:3.40.1500.10 5 304 6.6E-135 T 09-03-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BV404_RS13935 6159aeb62d605b0dddbaca3affa23c63 304 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 170 194 - T 09-03-2017 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BV404_RS13935 6159aeb62d605b0dddbaca3affa23c63 304 PRINTS PR00073 Coprogen oxidase signature 238 265 1.9E-68 T 09-03-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BV404_RS13935 6159aeb62d605b0dddbaca3affa23c63 304 PRINTS PR00073 Coprogen oxidase signature 129 151 1.9E-68 T 09-03-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BV404_RS13935 6159aeb62d605b0dddbaca3affa23c63 304 PRINTS PR00073 Coprogen oxidase signature 266 292 1.9E-68 T 09-03-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BV404_RS13935 6159aeb62d605b0dddbaca3affa23c63 304 PRINTS PR00073 Coprogen oxidase signature 31 47 1.9E-68 T 09-03-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BV404_RS13935 6159aeb62d605b0dddbaca3affa23c63 304 PRINTS PR00073 Coprogen oxidase signature 94 118 1.9E-68 T 09-03-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BV404_RS13935 6159aeb62d605b0dddbaca3affa23c63 304 PRINTS PR00073 Coprogen oxidase signature 166 195 1.9E-68 T 09-03-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BV404_RS13935 6159aeb62d605b0dddbaca3affa23c63 304 SUPERFAMILY SSF102886 5 304 1.57E-133 T 09-03-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BV404_RS01750 aff7fb4a736f5ec387183756664ab829 225 SMART SM00358 155 223 4.4E-22 T 09-03-2017 IPR014720 Double-stranded RNA-binding domain BV404_RS01750 aff7fb4a736f5ec387183756664ab829 225 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 219 30.087 T 09-03-2017 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 BV404_RS01750 aff7fb4a736f5ec387183756664ab829 225 Pfam PF14622 Ribonuclease-III-like 18 140 8.0E-33 T 09-03-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 BV404_RS01750 aff7fb4a736f5ec387183756664ab829 225 Pfam PF00035 Double-stranded RNA binding motif 155 222 4.6E-15 T 09-03-2017 IPR014720 Double-stranded RNA-binding domain BV404_RS01750 aff7fb4a736f5ec387183756664ab829 225 SMART SM00535 20 148 8.0E-54 T 09-03-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 BV404_RS01750 aff7fb4a736f5ec387183756664ab829 225 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 8 222 8.6E-75 T 09-03-2017 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 BV404_RS01750 aff7fb4a736f5ec387183756664ab829 225 Gene3D G3DSA:3.30.160.20 152 223 3.4E-27 T 09-03-2017 IPR014720 Double-stranded RNA-binding domain BV404_RS01750 aff7fb4a736f5ec387183756664ab829 225 SUPERFAMILY SSF69065 5 158 4.88E-50 T 09-03-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 BV404_RS01750 aff7fb4a736f5ec387183756664ab829 225 SUPERFAMILY SSF54768 108 222 1.45E-28 T 09-03-2017 BV404_RS01750 aff7fb4a736f5ec387183756664ab829 225 Gene3D G3DSA:1.10.1520.10 5 144 5.3E-48 T 09-03-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 BV404_RS01750 aff7fb4a736f5ec387183756664ab829 225 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 09-03-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 BV404_RS10530 4e670aa94c00ead56d2cd09c0d5220c0 521 SUPERFAMILY SSF55073 366 519 8.63E-37 T 09-03-2017 IPR029787 Nucleotide cyclase BV404_RS10530 4e670aa94c00ead56d2cd09c0d5220c0 521 Pfam PF00990 Diguanylate cyclase, GGDEF domain 363 517 5.9E-37 T 09-03-2017 IPR000160 GGDEF domain BV404_RS10530 4e670aa94c00ead56d2cd09c0d5220c0 521 SMART SM00267 351 521 2.8E-38 T 09-03-2017 IPR000160 GGDEF domain BV404_RS10530 4e670aa94c00ead56d2cd09c0d5220c0 521 Gene3D G3DSA:3.30.70.270 363 519 1.2E-41 T 09-03-2017 BV404_RS10530 4e670aa94c00ead56d2cd09c0d5220c0 521 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 361 519 6.0E-37 T 09-03-2017 IPR000160 GGDEF domain BV404_RS01275 d8fe1763370c23ca329f7c11ee09ce0a 164 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 20 160 2.4E-46 T 09-03-2017 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 BV404_RS01275 d8fe1763370c23ca329f7c11ee09ce0a 164 Pfam PF03968 OstA-like protein 30 141 5.8E-29 T 09-03-2017 IPR005653 Organic solvent tolerance-like, N-terminal BV404_RS01275 d8fe1763370c23ca329f7c11ee09ce0a 164 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 1 160 23.987 T 09-03-2017 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 BV404_RS01275 d8fe1763370c23ca329f7c11ee09ce0a 164 Gene3D G3DSA:2.60.450.10 21 156 3.9E-37 T 09-03-2017 BV404_RS04520 fb1b49d7a574f963bfa9aa863175324a 144 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 96 139 1.9E-9 T 09-03-2017 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BV404_RS04520 fb1b49d7a574f963bfa9aa863175324a 144 Pfam PF00460 Flagella basal body rod protein 9 32 3.5E-6 T 09-03-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BV404_RS04520 fb1b49d7a574f963bfa9aa863175324a 144 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 7 142 4.2E-40 T 09-03-2017 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 BV404_RS12815 c8e8385147a9d3cce3bbd5ace6134a43 361 Pfam PF00842 Alanine racemase, C-terminal domain 233 356 1.2E-38 T 09-03-2017 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BV404_RS12815 c8e8385147a9d3cce3bbd5ace6134a43 361 Gene3D G3DSA:3.20.20.10 10 212 1.0E-73 T 09-03-2017 IPR029066 PLP-binding barrel BV404_RS12815 c8e8385147a9d3cce3bbd5ace6134a43 361 Gene3D G3DSA:2.40.37.10 213 358 3.8E-55 T 09-03-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BV404_RS12815 c8e8385147a9d3cce3bbd5ace6134a43 361 SMART SM01005 233 357 2.4E-67 T 09-03-2017 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BV404_RS12815 c8e8385147a9d3cce3bbd5ace6134a43 361 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 4.8E-72 T 09-03-2017 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BV404_RS12815 c8e8385147a9d3cce3bbd5ace6134a43 361 SUPERFAMILY SSF50621 227 358 7.67E-47 T 09-03-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BV404_RS12815 c8e8385147a9d3cce3bbd5ace6134a43 361 TIGRFAM TIGR00492 alr: alanine racemase 3 356 7.3E-130 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BV404_RS12815 c8e8385147a9d3cce3bbd5ace6134a43 361 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 09-03-2017 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BV404_RS12815 c8e8385147a9d3cce3bbd5ace6134a43 361 SUPERFAMILY SSF51419 8 234 1.44E-70 T 09-03-2017 IPR029066 PLP-binding barrel BV404_RS12815 c8e8385147a9d3cce3bbd5ace6134a43 361 Hamap MF_01201 Alanine racemase. 1 357 35.123 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BV404_RS12815 c8e8385147a9d3cce3bbd5ace6134a43 361 PRINTS PR00992 Alanine racemase signature 192 219 7.2E-69 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BV404_RS12815 c8e8385147a9d3cce3bbd5ace6134a43 361 PRINTS PR00992 Alanine racemase signature 26 42 7.2E-69 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BV404_RS12815 c8e8385147a9d3cce3bbd5ace6134a43 361 PRINTS PR00992 Alanine racemase signature 287 304 7.2E-69 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BV404_RS12815 c8e8385147a9d3cce3bbd5ace6134a43 361 PRINTS PR00992 Alanine racemase signature 339 352 7.2E-69 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BV404_RS12815 c8e8385147a9d3cce3bbd5ace6134a43 361 PRINTS PR00992 Alanine racemase signature 60 78 7.2E-69 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BV404_RS12815 c8e8385147a9d3cce3bbd5ace6134a43 361 PRINTS PR00992 Alanine racemase signature 249 264 7.2E-69 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BV404_RS12815 c8e8385147a9d3cce3bbd5ace6134a43 361 PRINTS PR00992 Alanine racemase signature 120 132 7.2E-69 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BV404_RS12815 c8e8385147a9d3cce3bbd5ace6134a43 361 PRINTS PR00992 Alanine racemase signature 155 166 7.2E-69 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BV404_RS12815 c8e8385147a9d3cce3bbd5ace6134a43 361 PRINTS PR00992 Alanine racemase signature 266 281 7.2E-69 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BV404_RS05170 1d4b4722f1beb898e99dd4b17e15382f 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 9.2E-6 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BV404_RS05170 1d4b4722f1beb898e99dd4b17e15382f 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 9.2E-6 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BV404_RS05170 1d4b4722f1beb898e99dd4b17e15382f 334 Gene3D G3DSA:3.40.50.2300 58 166 1.2E-38 T 09-03-2017 BV404_RS05170 1d4b4722f1beb898e99dd4b17e15382f 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.1E-20 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BV404_RS05170 1d4b4722f1beb898e99dd4b17e15382f 334 SMART SM00354 1 71 4.8E-35 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BV404_RS05170 1d4b4722f1beb898e99dd4b17e15382f 334 Gene3D G3DSA:3.40.50.2300 167 331 2.5E-49 T 09-03-2017 BV404_RS05170 1d4b4722f1beb898e99dd4b17e15382f 334 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 60 272 1.9E-36 T 09-03-2017 IPR001761 Periplasmic binding protein/LacI sugar binding domain BV404_RS05170 1d4b4722f1beb898e99dd4b17e15382f 334 SUPERFAMILY SSF47413 1 59 4.29E-18 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 BV404_RS05170 1d4b4722f1beb898e99dd4b17e15382f 334 Gene3D G3DSA:1.10.260.40 2 57 6.7E-26 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 BV404_RS05170 1d4b4722f1beb898e99dd4b17e15382f 334 SUPERFAMILY SSF53822 61 331 3.93E-72 T 09-03-2017 IPR028082 Periplasmic binding protein-like I BV404_RS08470 24f8826448a9322199b200ba25517d8a 199 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 85 101 2.0E-5 T 09-03-2017 BV404_RS08470 24f8826448a9322199b200ba25517d8a 199 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 55 69 2.0E-5 T 09-03-2017 BV404_RS08470 24f8826448a9322199b200ba25517d8a 199 Gene3D G3DSA:3.40.50.880 9 195 2.4E-56 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like BV404_RS08470 24f8826448a9322199b200ba25517d8a 199 SUPERFAMILY SSF52317 9 198 3.06E-49 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like BV404_RS08470 24f8826448a9322199b200ba25517d8a 199 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 10 194 2.3E-54 T 09-03-2017 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BV404_RS08470 24f8826448a9322199b200ba25517d8a 199 PRINTS PR00097 Anthranilate synthase component II signature 130 142 1.8E-34 T 09-03-2017 BV404_RS08470 24f8826448a9322199b200ba25517d8a 199 PRINTS PR00097 Anthranilate synthase component II signature 58 67 1.8E-34 T 09-03-2017 BV404_RS08470 24f8826448a9322199b200ba25517d8a 199 PRINTS PR00097 Anthranilate synthase component II signature 172 185 1.8E-34 T 09-03-2017 BV404_RS08470 24f8826448a9322199b200ba25517d8a 199 PRINTS PR00097 Anthranilate synthase component II signature 10 24 1.8E-34 T 09-03-2017 BV404_RS08470 24f8826448a9322199b200ba25517d8a 199 PRINTS PR00097 Anthranilate synthase component II signature 110 118 1.8E-34 T 09-03-2017 BV404_RS08470 24f8826448a9322199b200ba25517d8a 199 PRINTS PR00097 Anthranilate synthase component II signature 85 96 1.8E-34 T 09-03-2017 BV404_RS08470 24f8826448a9322199b200ba25517d8a 199 Pfam PF00117 Glutamine amidotransferase class-I 12 192 6.6E-45 T 09-03-2017 IPR017926 Glutamine amidotransferase BV404_RS08470 24f8826448a9322199b200ba25517d8a 199 PRINTS PR00096 Glutamine amidotransferase superfamily signature 58 67 1.2E-13 T 09-03-2017 BV404_RS08470 24f8826448a9322199b200ba25517d8a 199 PRINTS PR00096 Glutamine amidotransferase superfamily signature 172 185 1.2E-13 T 09-03-2017 BV404_RS08470 24f8826448a9322199b200ba25517d8a 199 PRINTS PR00096 Glutamine amidotransferase superfamily signature 85 96 1.2E-13 T 09-03-2017 BV404_RS02685 728d7b1a9aa5172012d714528d5e6b40 102 SUPERFAMILY SSF82657 1 88 3.66E-32 T 09-03-2017 IPR002634 BolA protein BV404_RS02685 728d7b1a9aa5172012d714528d5e6b40 102 Pfam PF01722 BolA-like protein 10 83 6.4E-31 T 09-03-2017 IPR002634 BolA protein BV404_RS02685 728d7b1a9aa5172012d714528d5e6b40 102 Gene3D G3DSA:3.30.300.90 1 101 2.2E-33 T 09-03-2017 IPR002634 BolA protein BV404_RS02685 728d7b1a9aa5172012d714528d5e6b40 102 PIRSF PIRSF003113 1 99 8.0E-37 T 09-03-2017 IPR002634 BolA protein BV404_RS00415 3f4a93a14b995acb718f0cc2ad8c3746 153 SUPERFAMILY SSF57825 101 151 1.14E-15 T 09-03-2017 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal BV404_RS00415 3f4a93a14b995acb718f0cc2ad8c3746 153 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 149 6.2E-20 T 09-03-2017 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal BV404_RS00415 3f4a93a14b995acb718f0cc2ad8c3746 153 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 6.0E-38 T 09-03-2017 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal BV404_RS00415 3f4a93a14b995acb718f0cc2ad8c3746 153 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 97 1.0E-30 T 09-03-2017 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal BV404_RS00415 3f4a93a14b995acb718f0cc2ad8c3746 153 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 33.657 T 09-03-2017 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 BV404_RS00415 3f4a93a14b995acb718f0cc2ad8c3746 153 Gene3D G3DSA:2.30.30.20 101 152 2.3E-23 T 09-03-2017 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal BV404_RS00415 3f4a93a14b995acb718f0cc2ad8c3746 153 Gene3D G3DSA:3.30.70.140 2 98 7.9E-37 T 09-03-2017 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal BV404_RS00415 3f4a93a14b995acb718f0cc2ad8c3746 153 SUPERFAMILY SSF54893 1 100 1.31E-36 T 09-03-2017 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal BV404_RS00415 3f4a93a14b995acb718f0cc2ad8c3746 153 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 150 2.8E-61 T 09-03-2017 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 BV404_RS02445 df2f57c4a0dbf981e6ca7b1e3615b4eb 311 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 307 5.2E-105 T 09-03-2017 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BV404_RS02445 df2f57c4a0dbf981e6ca7b1e3615b4eb 311 Pfam PF06574 FAD synthetase 12 167 1.4E-57 T 09-03-2017 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BV404_RS02445 df2f57c4a0dbf981e6ca7b1e3615b4eb 311 PIRSF PIRSF004491 1 311 4.3E-105 T 09-03-2017 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BV404_RS02445 df2f57c4a0dbf981e6ca7b1e3615b4eb 311 SMART SM00904 183 307 8.2E-63 T 09-03-2017 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 BV404_RS02445 df2f57c4a0dbf981e6ca7b1e3615b4eb 311 Gene3D G3DSA:3.40.50.620 1 186 5.4E-66 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS02445 df2f57c4a0dbf981e6ca7b1e3615b4eb 311 SUPERFAMILY SSF82114 175 308 1.53E-44 T 09-03-2017 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 BV404_RS02445 df2f57c4a0dbf981e6ca7b1e3615b4eb 311 Pfam PF01687 Riboflavin kinase 184 306 2.4E-38 T 09-03-2017 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 BV404_RS02445 df2f57c4a0dbf981e6ca7b1e3615b4eb 311 SUPERFAMILY SSF52374 15 175 6.19E-34 T 09-03-2017 BV404_RS02445 df2f57c4a0dbf981e6ca7b1e3615b4eb 311 Gene3D G3DSA:2.40.30.30 188 308 9.4E-40 T 09-03-2017 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 Reactome: R-HSA-196843 BV404_RS08775 3b8483fdc3e4666cc127da878c443e9e 450 Gene3D G3DSA:3.40.50.10070 24 171 4.6E-53 T 09-03-2017 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 BV404_RS08775 3b8483fdc3e4666cc127da878c443e9e 450 Hamap MF_00671 Protein TolB [tolB]. 5 446 35.845 T 09-03-2017 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 BV404_RS08775 3b8483fdc3e4666cc127da878c443e9e 450 SUPERFAMILY SSF69304 176 448 4.84E-58 T 09-03-2017 BV404_RS08775 3b8483fdc3e4666cc127da878c443e9e 450 Pfam PF07676 WD40-like Beta Propeller Repeat 257 292 1.5E-7 T 09-03-2017 IPR011659 WD40-like Beta Propeller BV404_RS08775 3b8483fdc3e4666cc127da878c443e9e 450 Pfam PF07676 WD40-like Beta Propeller Repeat 222 248 5.0E-9 T 09-03-2017 IPR011659 WD40-like Beta Propeller BV404_RS08775 3b8483fdc3e4666cc127da878c443e9e 450 Pfam PF07676 WD40-like Beta Propeller Repeat 300 336 3.3E-13 T 09-03-2017 IPR011659 WD40-like Beta Propeller BV404_RS08775 3b8483fdc3e4666cc127da878c443e9e 450 SUPERFAMILY SSF52964 29 181 1.15E-41 T 09-03-2017 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 BV404_RS08775 3b8483fdc3e4666cc127da878c443e9e 450 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 17 447 6.0E-170 T 09-03-2017 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 BV404_RS08775 3b8483fdc3e4666cc127da878c443e9e 450 Gene3D G3DSA:2.130.10.10 172 448 1.3E-79 T 09-03-2017 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 BV404_RS08775 3b8483fdc3e4666cc127da878c443e9e 450 Pfam PF04052 TolB amino-terminal domain 24 126 1.0E-35 T 09-03-2017 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 BV404_RS10080 19f10c5c148930c7db3ad86dd3aab23b 291 Gene3D G3DSA:3.30.465.10 196 281 3.9E-30 T 09-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 BV404_RS10080 19f10c5c148930c7db3ad86dd3aab23b 291 Pfam PF03471 Transporter associated domain 204 279 9.0E-23 T 09-03-2017 IPR005170 Transporter-associated domain BV404_RS10080 19f10c5c148930c7db3ad86dd3aab23b 291 SMART SM00116 76 125 0.012 T 09-03-2017 IPR000644 CBS domain BV404_RS10080 19f10c5c148930c7db3ad86dd3aab23b 291 SMART SM00116 139 187 0.028 T 09-03-2017 IPR000644 CBS domain BV404_RS10080 19f10c5c148930c7db3ad86dd3aab23b 291 Pfam PF00571 CBS domain 138 187 1.4E-6 T 09-03-2017 IPR000644 CBS domain BV404_RS10080 19f10c5c148930c7db3ad86dd3aab23b 291 Pfam PF00571 CBS domain 67 124 4.1E-8 T 09-03-2017 IPR000644 CBS domain BV404_RS10080 19f10c5c148930c7db3ad86dd3aab23b 291 SUPERFAMILY SSF56176 198 280 8.45E-23 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 BV404_RS10080 19f10c5c148930c7db3ad86dd3aab23b 291 SUPERFAMILY SSF54631 64 200 8.54E-34 T 09-03-2017 BV404_RS10080 19f10c5c148930c7db3ad86dd3aab23b 291 SMART SM01091 203 281 1.5E-30 T 09-03-2017 IPR005170 Transporter-associated domain BV404_RS10080 19f10c5c148930c7db3ad86dd3aab23b 291 Gene3D G3DSA:3.10.580.10 53 195 7.2E-26 T 09-03-2017 BV404_RS12215 5d975ab0664da00e1ebc16a1a9c9e025 387 Gene3D G3DSA:3.40.50.1270 175 371 5.0E-79 T 09-03-2017 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS12215 5d975ab0664da00e1ebc16a1a9c9e025 387 PIRSF PIRSF000724 1 387 6.4E-135 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS12215 5d975ab0664da00e1ebc16a1a9c9e025 387 Pfam PF00162 Phosphoglycerate kinase 6 373 5.7E-137 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS12215 5d975ab0664da00e1ebc16a1a9c9e025 387 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 09-03-2017 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS12215 5d975ab0664da00e1ebc16a1a9c9e025 387 SUPERFAMILY SSF53748 3 382 1.18E-144 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS12215 5d975ab0664da00e1ebc16a1a9c9e025 387 Gene3D G3DSA:3.40.50.1260 5 174 5.1E-65 T 09-03-2017 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS12215 5d975ab0664da00e1ebc16a1a9c9e025 387 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 5.8E-83 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS12215 5d975ab0664da00e1ebc16a1a9c9e025 387 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 5.8E-83 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS12215 5d975ab0664da00e1ebc16a1a9c9e025 387 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 5.8E-83 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS12215 5d975ab0664da00e1ebc16a1a9c9e025 387 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 5.8E-83 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS12215 5d975ab0664da00e1ebc16a1a9c9e025 387 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 5.8E-83 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS12215 5d975ab0664da00e1ebc16a1a9c9e025 387 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 5.8E-83 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS12215 5d975ab0664da00e1ebc16a1a9c9e025 387 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 5.8E-83 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS12215 5d975ab0664da00e1ebc16a1a9c9e025 387 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 5.8E-83 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS12215 5d975ab0664da00e1ebc16a1a9c9e025 387 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 5.8E-83 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS12215 5d975ab0664da00e1ebc16a1a9c9e025 387 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 38.468 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS02610 4ee809ba008426035ffc147a52e69a35 330 Pfam PF09084 NMT1/THI5 like 41 255 7.3E-53 T 09-03-2017 IPR015168 SsuA/THI5-like BV404_RS02610 4ee809ba008426035ffc147a52e69a35 330 Gene3D G3DSA:3.40.190.10 113 241 5.6E-17 T 09-03-2017 BV404_RS02610 4ee809ba008426035ffc147a52e69a35 330 SUPERFAMILY SSF53850 28 261 1.11E-38 T 09-03-2017 BV404_RS13120 20273feaff35f2a5dfafb7832ed1ae88 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 2.2E-231 T 09-03-2017 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BV404_RS13120 20273feaff35f2a5dfafb7832ed1ae88 394 Gene3D G3DSA:3.40.50.300 4 211 6.3E-68 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS13120 20273feaff35f2a5dfafb7832ed1ae88 394 SUPERFAMILY SSF50447 205 301 8.25E-30 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain BV404_RS13120 20273feaff35f2a5dfafb7832ed1ae88 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 1.7E-16 T 09-03-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 BV404_RS13120 20273feaff35f2a5dfafb7832ed1ae88 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 5.1E-33 T 09-03-2017 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal BV404_RS13120 20273feaff35f2a5dfafb7832ed1ae88 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 7.0E-24 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BV404_RS13120 20273feaff35f2a5dfafb7832ed1ae88 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 7.0E-24 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BV404_RS13120 20273feaff35f2a5dfafb7832ed1ae88 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 7.0E-24 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BV404_RS13120 20273feaff35f2a5dfafb7832ed1ae88 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 7.0E-24 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BV404_RS13120 20273feaff35f2a5dfafb7832ed1ae88 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 7.0E-24 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BV404_RS13120 20273feaff35f2a5dfafb7832ed1ae88 394 Gene3D G3DSA:2.40.30.10 212 298 2.9E-35 T 09-03-2017 BV404_RS13120 20273feaff35f2a5dfafb7832ed1ae88 394 Gene3D G3DSA:2.40.30.10 300 393 1.6E-46 T 09-03-2017 BV404_RS13120 20273feaff35f2a5dfafb7832ed1ae88 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 09-03-2017 IPR031157 Tr-type G domain, conserved site BV404_RS13120 20273feaff35f2a5dfafb7832ed1ae88 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.699 T 09-03-2017 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BV404_RS13120 20273feaff35f2a5dfafb7832ed1ae88 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 7.8E-58 T 09-03-2017 BV404_RS13120 20273feaff35f2a5dfafb7832ed1ae88 394 SUPERFAMILY SSF50465 298 393 5.18E-35 T 09-03-2017 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal BV404_RS13120 20273feaff35f2a5dfafb7832ed1ae88 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 4.5E-14 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 BV404_RS13120 20273feaff35f2a5dfafb7832ed1ae88 394 SUPERFAMILY SSF52540 6 219 3.51E-60 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS05785 fe1fc9724779857b6c4fbaba12c416e7 196 Gene3D G3DSA:3.30.1460.30 3 104 7.5E-35 T 09-03-2017 IPR007076 TfoX, N-terminal BV404_RS05785 fe1fc9724779857b6c4fbaba12c416e7 196 Pfam PF04994 TfoX C-terminal domain 115 194 1.3E-32 T 09-03-2017 IPR007077 TfoX, C-terminal BV404_RS05785 fe1fc9724779857b6c4fbaba12c416e7 196 PIRSF PIRSF028788 1 196 5.1E-47 T 09-03-2017 IPR026256 Transcriptional regulator, TfoX/Sxy-type BV404_RS05785 fe1fc9724779857b6c4fbaba12c416e7 196 Pfam PF04993 TfoX N-terminal domain 12 102 3.0E-29 T 09-03-2017 IPR007076 TfoX, N-terminal BV404_RS05785 fe1fc9724779857b6c4fbaba12c416e7 196 Gene3D G3DSA:1.10.150.20 114 195 2.3E-32 T 09-03-2017 BV404_RS05785 fe1fc9724779857b6c4fbaba12c416e7 196 SUPERFAMILY SSF159894 5 103 1.54E-29 T 09-03-2017 BV404_RS03970 3780b6db51fceb4c1a69c325846e1fde 160 SUPERFAMILY SSF82093 30 141 2.75E-39 T 09-03-2017 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 BV404_RS03970 3780b6db51fceb4c1a69c325846e1fde 160 Pfam PF03100 CcmE 4 135 2.7E-45 T 09-03-2017 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 BV404_RS03970 3780b6db51fceb4c1a69c325846e1fde 160 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 145 32.439 T 09-03-2017 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 BV404_RS03970 3780b6db51fceb4c1a69c325846e1fde 160 Gene3D G3DSA:2.40.50.140 26 129 1.8E-39 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS04295 a38d899b6e3fc89e3237e0d3b7f72313 539 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 474 491 - T 09-03-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BV404_RS04295 a38d899b6e3fc89e3237e0d3b7f72313 539 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 427 523 3.5E-17 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 BV404_RS04295 a38d899b6e3fc89e3237e0d3b7f72313 539 SUPERFAMILY SSF55604 461 537 5.1E-16 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 BV404_RS04295 a38d899b6e3fc89e3237e0d3b7f72313 539 Gene3D G3DSA:3.30.1360.60 459 538 2.8E-22 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 BV404_RS04295 a38d899b6e3fc89e3237e0d3b7f72313 539 Pfam PF00367 phosphotransferase system, EIIB 463 495 7.8E-14 T 09-03-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BV404_RS04295 a38d899b6e3fc89e3237e0d3b7f72313 539 Pfam PF02378 Phosphotransferase system, EIIC 10 363 4.4E-77 T 09-03-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BV404_RS11125 6b1a396636e94866dc37ea53313940b8 271 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 30 271 5.5E-98 T 09-03-2017 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 BV404_RS11125 6b1a396636e94866dc37ea53313940b8 271 SUPERFAMILY SSF111364 30 271 2.88E-80 T 09-03-2017 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 BV404_RS11125 6b1a396636e94866dc37ea53313940b8 271 Gene3D G3DSA:2.40.230.20 23 271 2.0E-97 T 09-03-2017 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 BV404_RS11125 6b1a396636e94866dc37ea53313940b8 271 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 53 77 2.6E-5 T 09-03-2017 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 BV404_RS11125 6b1a396636e94866dc37ea53313940b8 271 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 247 270 2.6E-5 T 09-03-2017 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 BV404_RS11125 6b1a396636e94866dc37ea53313940b8 271 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 111 131 2.6E-5 T 09-03-2017 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 BV404_RS09565 dda4a354fd44327d3063314fed8c6ecd 291 Gene3D G3DSA:3.40.190.10 177 257 2.2E-16 T 09-03-2017 BV404_RS09565 dda4a354fd44327d3063314fed8c6ecd 291 SUPERFAMILY SSF46785 1 84 1.09E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS09565 dda4a354fd44327d3063314fed8c6ecd 291 Gene3D G3DSA:1.10.10.10 1 82 5.4E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS09565 dda4a354fd44327d3063314fed8c6ecd 291 Gene3D G3DSA:3.40.190.10 91 176 5.4E-22 T 09-03-2017 BV404_RS09565 dda4a354fd44327d3063314fed8c6ecd 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.3E-13 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS09565 dda4a354fd44327d3063314fed8c6ecd 291 Pfam PF03466 LysR substrate binding domain 88 286 2.6E-40 T 09-03-2017 IPR005119 LysR, substrate-binding BV404_RS09565 dda4a354fd44327d3063314fed8c6ecd 291 SUPERFAMILY SSF53850 88 288 4.48E-37 T 09-03-2017 BV404_RS09210 ada7d2221b63aacd3e866cdfb0030640 602 PRINTS PR00344 Bacterial sensor protein C-terminal signature 523 537 1.2E-15 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS09210 ada7d2221b63aacd3e866cdfb0030640 602 PRINTS PR00344 Bacterial sensor protein C-terminal signature 576 589 1.2E-15 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS09210 ada7d2221b63aacd3e866cdfb0030640 602 PRINTS PR00344 Bacterial sensor protein C-terminal signature 541 551 1.2E-15 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS09210 ada7d2221b63aacd3e866cdfb0030640 602 PRINTS PR00344 Bacterial sensor protein C-terminal signature 552 570 1.2E-15 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS09210 ada7d2221b63aacd3e866cdfb0030640 602 SMART SM00388 373 441 4.1E-11 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS09210 ada7d2221b63aacd3e866cdfb0030640 602 Pfam PF00512 His Kinase A (phospho-acceptor) domain 374 439 4.3E-12 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS09210 ada7d2221b63aacd3e866cdfb0030640 602 SMART SM00387 484 592 4.7E-29 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS09210 ada7d2221b63aacd3e866cdfb0030640 602 Gene3D G3DSA:1.10.287.130 372 437 1.1E-8 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS09210 ada7d2221b63aacd3e866cdfb0030640 602 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 486 590 2.8E-20 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS09210 ada7d2221b63aacd3e866cdfb0030640 602 PIRSF PIRSF036431 1 597 1.0E-187 T 09-03-2017 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) BV404_RS09210 ada7d2221b63aacd3e866cdfb0030640 602 Gene3D G3DSA:3.30.450.20 113 140 1.5E-5 T 09-03-2017 BV404_RS09210 ada7d2221b63aacd3e866cdfb0030640 602 Gene3D G3DSA:3.30.565.10 443 589 1.9E-36 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS09210 ada7d2221b63aacd3e866cdfb0030640 602 SUPERFAMILY SSF55874 439 594 5.63E-35 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS09210 ada7d2221b63aacd3e866cdfb0030640 602 SUPERFAMILY SSF47384 357 440 1.22E-12 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS09210 ada7d2221b63aacd3e866cdfb0030640 602 SUPERFAMILY SSF103190 50 187 1.99E-29 T 09-03-2017 IPR029151 Periplasmic sensor domain-like BV404_RS02880 d5980d2349e1d472346e721c040fbcc9 874 SUPERFAMILY SSF109604 418 556 2.98E-14 T 09-03-2017 BV404_RS02880 d5980d2349e1d472346e721c040fbcc9 874 Gene3D G3DSA:3.30.460.10 71 161 8.1E-10 T 09-03-2017 BV404_RS02880 d5980d2349e1d472346e721c040fbcc9 874 Gene3D G3DSA:1.10.3210.10 421 610 6.3E-26 T 09-03-2017 IPR006674 HD domain BV404_RS02880 d5980d2349e1d472346e721c040fbcc9 874 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 874 339.467 T 09-03-2017 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 BV404_RS02880 d5980d2349e1d472346e721c040fbcc9 874 SMART SM00471 447 594 4.3E-10 T 09-03-2017 IPR003607 HD/PDEase domain BV404_RS02880 d5980d2349e1d472346e721c040fbcc9 874 Pfam PF01909 Nucleotidyltransferase domain 56 115 3.5E-8 T 09-03-2017 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 BV404_RS02880 d5980d2349e1d472346e721c040fbcc9 874 SUPERFAMILY SSF55021 796 853 1.18E-7 T 09-03-2017 BV404_RS02880 d5980d2349e1d472346e721c040fbcc9 874 Pfam PF08335 GlnD PII-uridylyltransferase 176 314 4.7E-36 T 09-03-2017 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 BV404_RS02880 d5980d2349e1d472346e721c040fbcc9 874 Gene3D G3DSA:3.30.70.260 692 751 1.3E-4 T 09-03-2017 BV404_RS02880 d5980d2349e1d472346e721c040fbcc9 874 Gene3D G3DSA:3.30.70.260 796 858 3.5E-8 T 09-03-2017 BV404_RS02880 d5980d2349e1d472346e721c040fbcc9 874 PIRSF PIRSF006288 8 874 0.0 T 09-03-2017 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 BV404_RS02880 d5980d2349e1d472346e721c040fbcc9 874 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 28 868 0.0 T 09-03-2017 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 BV404_RS02880 d5980d2349e1d472346e721c040fbcc9 874 SUPERFAMILY SSF55021 689 750 9.92E-9 T 09-03-2017 BV404_RS02880 d5980d2349e1d472346e721c040fbcc9 874 SUPERFAMILY SSF81301 51 172 1.64E-20 T 09-03-2017 BV404_RS02880 d5980d2349e1d472346e721c040fbcc9 874 SUPERFAMILY SSF81593 186 310 1.65E-10 T 09-03-2017 BV404_RS02880 d5980d2349e1d472346e721c040fbcc9 874 Pfam PF01966 HD domain 452 584 8.7E-14 T 09-03-2017 IPR006674 HD domain BV404_RS08130 9e6d8244730529fa132747333f584b90 610 SUPERFAMILY SSF47781 521 609 3.81E-19 T 09-03-2017 IPR010994 RuvA domain 2-like BV404_RS08130 9e6d8244730529fa132747333f584b90 610 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 390 542 1.7E-42 T 09-03-2017 IPR001162 UvrC family homology region BV404_RS08130 9e6d8244730529fa132747333f584b90 610 SMART SM00278 556 575 0.24 T 09-03-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BV404_RS08130 9e6d8244730529fa132747333f584b90 610 SMART SM00278 588 607 510.0 T 09-03-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BV404_RS08130 9e6d8244730529fa132747333f584b90 610 SUPERFAMILY SSF46600 190 243 2.09E-12 T 09-03-2017 IPR001943 UVR domain GO:0005515 BV404_RS08130 9e6d8244730529fa132747333f584b90 610 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 10 589 4.1E-212 T 09-03-2017 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 BV404_RS08130 9e6d8244730529fa132747333f584b90 610 SMART SM00465 17 98 1.0E-23 T 09-03-2017 IPR000305 GIY-YIG nuclease superfamily BV404_RS08130 9e6d8244730529fa132747333f584b90 610 SUPERFAMILY SSF82771 16 100 8.76E-24 T 09-03-2017 IPR000305 GIY-YIG nuclease superfamily BV404_RS08130 9e6d8244730529fa132747333f584b90 610 Pfam PF01541 GIY-YIG catalytic domain 18 93 3.7E-13 T 09-03-2017 IPR000305 GIY-YIG nuclease superfamily BV404_RS08130 9e6d8244730529fa132747333f584b90 610 Pfam PF14520 Helix-hairpin-helix domain 558 609 2.5E-9 T 09-03-2017 BV404_RS08130 9e6d8244730529fa132747333f584b90 610 Pfam PF02151 UvrB/uvrC motif 205 238 3.6E-7 T 09-03-2017 IPR001943 UVR domain GO:0005515 BV404_RS08130 9e6d8244730529fa132747333f584b90 610 Gene3D G3DSA:4.10.860.10 183 243 4.0E-18 T 09-03-2017 IPR001943 UVR domain GO:0005515 BV404_RS08130 9e6d8244730529fa132747333f584b90 610 Gene3D G3DSA:1.10.150.20 555 609 6.1E-23 T 09-03-2017 BV404_RS08130 9e6d8244730529fa132747333f584b90 610 Gene3D G3DSA:3.40.1440.10 16 97 4.7E-13 T 09-03-2017 IPR027299 GIY-YIG domain BV404_RS08130 9e6d8244730529fa132747333f584b90 610 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 607 28.308 T 09-03-2017 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 BV404_RS12305 b1bbc8e032069d0cdcf3407f2b4f8195 97 Gene3D G3DSA:3.30.1200.10 3 93 1.1E-28 T 09-03-2017 IPR003746 Protein of unknown function DUF167 BV404_RS12305 b1bbc8e032069d0cdcf3407f2b4f8195 97 Hamap MF_00634 UPF0235 protein YggU [yggU]. 8 94 19.269 T 09-03-2017 IPR003746 Protein of unknown function DUF167 BV404_RS12305 b1bbc8e032069d0cdcf3407f2b4f8195 97 SMART SM01152 8 84 1.1E-36 T 09-03-2017 IPR003746 Protein of unknown function DUF167 BV404_RS12305 b1bbc8e032069d0cdcf3407f2b4f8195 97 SUPERFAMILY SSF69786 4 96 8.24E-31 T 09-03-2017 IPR003746 Protein of unknown function DUF167 BV404_RS12305 b1bbc8e032069d0cdcf3407f2b4f8195 97 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 12 82 3.8E-24 T 09-03-2017 IPR003746 Protein of unknown function DUF167 BV404_RS12305 b1bbc8e032069d0cdcf3407f2b4f8195 97 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 9 92 1.3E-25 T 09-03-2017 IPR005228 Conserved hypothetical protein CHP00251 BV404_RS00245 375d6b119b34b3fedf2a4934a7cc16c7 215 Pfam PF11612 Type II secretion system (T2SS), protein J 65 202 5.8E-40 T 09-03-2017 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 BV404_RS00245 375d6b119b34b3fedf2a4934a7cc16c7 215 Pfam PF13633 Prokaryotic N-terminal methylation site 13 38 7.4E-12 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site BV404_RS00245 375d6b119b34b3fedf2a4934a7cc16c7 215 SUPERFAMILY SSF54523 48 208 2.47E-55 T 09-03-2017 BV404_RS00245 375d6b119b34b3fedf2a4934a7cc16c7 215 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 13 35 3.2E-9 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site BV404_RS00245 375d6b119b34b3fedf2a4934a7cc16c7 215 Gene3D G3DSA:2.10.70.20 159 208 2.6E-22 T 09-03-2017 BV404_RS00245 375d6b119b34b3fedf2a4934a7cc16c7 215 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 13 33 - T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site BV404_RS00245 375d6b119b34b3fedf2a4934a7cc16c7 215 Gene3D G3DSA:3.10.610.10 44 157 1.8E-46 T 09-03-2017 BV404_RS00245 375d6b119b34b3fedf2a4934a7cc16c7 215 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 13 204 1.0E-83 T 09-03-2017 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 BV404_RS09740 da63a5d479e1e739996dfeda4f9415df 277 Gene3D G3DSA:3.40.50.10490 102 256 1.6E-29 T 09-03-2017 BV404_RS09740 da63a5d479e1e739996dfeda4f9415df 277 SUPERFAMILY SSF53697 101 269 7.27E-33 T 09-03-2017 BV404_RS09740 da63a5d479e1e739996dfeda4f9415df 277 Gene3D G3DSA:1.10.10.10 5 80 7.3E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS09740 da63a5d479e1e739996dfeda4f9415df 277 Pfam PF01418 Helix-turn-helix domain, rpiR family 6 81 2.0E-18 T 09-03-2017 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 BV404_RS09740 da63a5d479e1e739996dfeda4f9415df 277 SUPERFAMILY SSF46689 5 80 1.02E-20 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS09740 da63a5d479e1e739996dfeda4f9415df 277 Pfam PF01380 SIS domain 124 251 4.4E-17 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 BV404_RS21630 f507404e000b2358e0003f9b2e47a78e 262 Pfam PF01569 PAP2 superfamily 154 261 2.5E-7 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BV404_RS21630 f507404e000b2358e0003f9b2e47a78e 262 SUPERFAMILY SSF48317 86 261 2.62E-9 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BV404_RS21630 f507404e000b2358e0003f9b2e47a78e 262 Gene3D G3DSA:1.20.144.10 70 261 5.2E-10 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BV404_RS03740 126902b0fcf8f838650f699166dc438c 175 Gene3D G3DSA:3.40.50.360 1 169 1.5E-64 T 09-03-2017 IPR029039 Flavoprotein-like domain BV404_RS03740 126902b0fcf8f838650f699166dc438c 175 PIRSF PIRSF038996 1 172 5.4E-69 T 09-03-2017 IPR010086 Flavodoxin, long chain GO:0010181 BV404_RS03740 126902b0fcf8f838650f699166dc438c 175 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 09-03-2017 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 BV404_RS03740 126902b0fcf8f838650f699166dc438c 175 TIGRFAM TIGR01752 flav_long: flavodoxin 4 168 1.8E-73 T 09-03-2017 IPR010086 Flavodoxin, long chain GO:0010181 BV404_RS03740 126902b0fcf8f838650f699166dc438c 175 SUPERFAMILY SSF52218 4 171 2.1E-53 T 09-03-2017 IPR029039 Flavoprotein-like domain BV404_RS03740 126902b0fcf8f838650f699166dc438c 175 Pfam PF00258 Flavodoxin 6 160 6.1E-33 T 09-03-2017 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 BV404_RS13085 acbed1b0e1f632c3aa69c4d792d53418 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 56 122 2.3E-30 T 09-03-2017 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS13085 acbed1b0e1f632c3aa69c4d792d53418 122 SUPERFAMILY SSF54736 51 122 6.8E-25 T 09-03-2017 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like BV404_RS13085 acbed1b0e1f632c3aa69c4d792d53418 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 58 93 3.0E-12 T 09-03-2017 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS13085 acbed1b0e1f632c3aa69c4d792d53418 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 122 7.9E-48 T 09-03-2017 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS13085 acbed1b0e1f632c3aa69c4d792d53418 122 Gene3D G3DSA:1.20.5.710 2 50 2.0E-22 T 09-03-2017 BV404_RS13085 acbed1b0e1f632c3aa69c4d792d53418 122 SUPERFAMILY SSF48300 4 58 1.7E-16 T 09-03-2017 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS13085 acbed1b0e1f632c3aa69c4d792d53418 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 49 1.5E-17 T 09-03-2017 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS13085 acbed1b0e1f632c3aa69c4d792d53418 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 122 25.296 T 09-03-2017 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS13085 acbed1b0e1f632c3aa69c4d792d53418 122 Gene3D G3DSA:3.30.1390.10 51 122 2.0E-33 T 09-03-2017 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like BV404_RS02490 559040a77f231d1c07ed96706074c718 370 SUPERFAMILY SSF53067 6 40 3.21E-26 T 09-03-2017 BV404_RS02490 559040a77f231d1c07ed96706074c718 370 SUPERFAMILY SSF53067 67 112 3.21E-26 T 09-03-2017 BV404_RS02490 559040a77f231d1c07ed96706074c718 370 SUPERFAMILY SSF53067 144 343 3.21E-26 T 09-03-2017 BV404_RS02490 559040a77f231d1c07ed96706074c718 370 Gene3D G3DSA:3.30.420.40 146 329 3.0E-71 T 09-03-2017 BV404_RS02490 559040a77f231d1c07ed96706074c718 370 Pfam PF03702 Uncharacterised protein family (UPF0075) 6 369 8.1E-168 T 09-03-2017 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17 BV404_RS02490 559040a77f231d1c07ed96706074c718 370 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 5 369 42.399 T 09-03-2017 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17 BV404_RS14240 1a814208c5e5e45fe8be44a7fe161ca1 467 SMART SM00382 142 334 2.5E-4 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS14240 1a814208c5e5e45fe8be44a7fe161ca1 467 SUPERFAMILY SSF50615 1 75 1.18E-24 T 09-03-2017 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 BV404_RS14240 1a814208c5e5e45fe8be44a7fe161ca1 467 SUPERFAMILY SSF47917 352 466 7.06E-50 T 09-03-2017 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 BV404_RS14240 1a814208c5e5e45fe8be44a7fe161ca1 467 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 467 55.85 T 09-03-2017 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201 BV404_RS14240 1a814208c5e5e45fe8be44a7fe161ca1 467 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 349 6.8E-61 T 09-03-2017 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 BV404_RS14240 1a814208c5e5e45fe8be44a7fe161ca1 467 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 467 1.2E-247 T 09-03-2017 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201 BV404_RS14240 1a814208c5e5e45fe8be44a7fe161ca1 467 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 340 349 - T 09-03-2017 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 BV404_RS14240 1a814208c5e5e45fe8be44a7fe161ca1 467 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 73 5.0E-21 T 09-03-2017 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 BV404_RS14240 1a814208c5e5e45fe8be44a7fe161ca1 467 SUPERFAMILY SSF52540 77 355 1.11E-86 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS14240 1a814208c5e5e45fe8be44a7fe161ca1 467 Gene3D G3DSA:3.40.50.300 76 350 3.3E-106 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS14240 1a814208c5e5e45fe8be44a7fe161ca1 467 Gene3D G3DSA:1.10.1140.10 352 467 5.5E-50 T 09-03-2017 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 BV404_RS14240 1a814208c5e5e45fe8be44a7fe161ca1 467 Gene3D G3DSA:2.40.10.170 2 75 2.0E-29 T 09-03-2017 BV404_RS14025 9c5e3fdb3e84a0ed6cbbb87c344fd147 328 Gene3D G3DSA:3.90.1200.10 108 326 6.9E-48 T 09-03-2017 BV404_RS14025 9c5e3fdb3e84a0ed6cbbb87c344fd147 328 Pfam PF01636 Phosphotransferase enzyme family 36 253 1.4E-42 T 09-03-2017 IPR002575 Aminoglycoside phosphotransferase BV404_RS14025 9c5e3fdb3e84a0ed6cbbb87c344fd147 328 Hamap MF_01497 Stress response kinase A [srkA]. 4 318 47.042 T 09-03-2017 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 BV404_RS14025 9c5e3fdb3e84a0ed6cbbb87c344fd147 328 SUPERFAMILY SSF56112 6 328 2.62E-89 T 09-03-2017 IPR011009 Protein kinase-like domain BV404_RS00285 b0c5987b59f2e411a8652e7a5ae6041f 233 SUPERFAMILY SSF53271 54 231 1.48E-36 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like BV404_RS00285 b0c5987b59f2e411a8652e7a5ae6041f 233 Pfam PF00156 Phosphoribosyl transferase domain 140 230 6.5E-9 T 09-03-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 BV404_RS00285 b0c5987b59f2e411a8652e7a5ae6041f 233 Gene3D G3DSA:3.40.50.2020 57 231 5.6E-28 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like BV404_RS12405 7a9960ad270adf84e3b3f08a1b75aee4 286 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 3 285 39.784 T 09-03-2017 IPR023749 Co-chaperone DjlA GO:0051087 BV404_RS12405 7a9960ad270adf84e3b3f08a1b75aee4 286 SMART SM00271 219 284 2.0E-20 T 09-03-2017 IPR001623 DnaJ domain BV404_RS12405 7a9960ad270adf84e3b3f08a1b75aee4 286 SUPERFAMILY SSF46565 138 282 1.01E-32 T 09-03-2017 IPR001623 DnaJ domain BV404_RS12405 7a9960ad270adf84e3b3f08a1b75aee4 286 Pfam PF05099 Tellurite resistance protein TerB 44 177 1.9E-17 T 09-03-2017 IPR007791 Co-chaperone DjlA, N-terminal BV404_RS12405 7a9960ad270adf84e3b3f08a1b75aee4 286 PRINTS PR00625 DnaJ domain signature 240 255 2.8E-11 T 09-03-2017 IPR001623 DnaJ domain BV404_RS12405 7a9960ad270adf84e3b3f08a1b75aee4 286 PRINTS PR00625 DnaJ domain signature 222 240 2.8E-11 T 09-03-2017 IPR001623 DnaJ domain BV404_RS12405 7a9960ad270adf84e3b3f08a1b75aee4 286 PRINTS PR00625 DnaJ domain signature 264 284 2.8E-11 T 09-03-2017 IPR001623 DnaJ domain BV404_RS12405 7a9960ad270adf84e3b3f08a1b75aee4 286 SUPERFAMILY SSF158682 47 181 2.88E-24 T 09-03-2017 IPR029024 TerB-like BV404_RS12405 7a9960ad270adf84e3b3f08a1b75aee4 286 Gene3D G3DSA:1.10.3680.10 218 224 3.7E-39 T 09-03-2017 IPR029024 TerB-like BV404_RS12405 7a9960ad270adf84e3b3f08a1b75aee4 286 Gene3D G3DSA:1.10.3680.10 20 185 3.7E-39 T 09-03-2017 IPR029024 TerB-like BV404_RS12405 7a9960ad270adf84e3b3f08a1b75aee4 286 Pfam PF00226 DnaJ domain 220 282 8.1E-14 T 09-03-2017 IPR001623 DnaJ domain BV404_RS12405 7a9960ad270adf84e3b3f08a1b75aee4 286 Gene3D G3DSA:1.10.287.110 225 282 3.9E-16 T 09-03-2017 IPR001623 DnaJ domain BV404_RS09695 cfb293918b84278ad8ccb05cd546be4b 296 Pfam PF01933 Uncharacterised protein family UPF0052 9 287 5.3E-73 T 09-03-2017 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 BV404_RS09695 cfb293918b84278ad8ccb05cd546be4b 296 Gene3D G3DSA:3.40.50.10680 79 294 3.0E-52 T 09-03-2017 BV404_RS09695 cfb293918b84278ad8ccb05cd546be4b 296 SUPERFAMILY SSF142338 6 291 1.19E-82 T 09-03-2017 BV404_RS09695 cfb293918b84278ad8ccb05cd546be4b 296 Hamap MF_00973 Gluconeogenesis factor. 5 296 30.274 T 09-03-2017 IPR010119 Gluconeogenesis factor BV404_RS09695 cfb293918b84278ad8ccb05cd546be4b 296 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 9 263 2.7E-100 T 09-03-2017 IPR010119 Gluconeogenesis factor BV404_RS08640 8a1b197fa6de675cb66d7b1cc25816e6 364 SUPERFAMILY SSF53383 8 361 6.63E-115 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase BV404_RS08640 8a1b197fa6de675cb66d7b1cc25816e6 364 Gene3D G3DSA:3.90.1150.10 262 362 1.3E-43 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 BV404_RS08640 8a1b197fa6de675cb66d7b1cc25816e6 364 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 8 363 1.9E-162 T 09-03-2017 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 BV404_RS08640 8a1b197fa6de675cb66d7b1cc25816e6 364 PIRSF PIRSF000525 2 364 1.1E-154 T 09-03-2017 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 BV404_RS08640 8a1b197fa6de675cb66d7b1cc25816e6 364 Pfam PF00266 Aminotransferase class-V 8 352 2.9E-63 T 09-03-2017 IPR000192 Aminotransferase class V domain BV404_RS08640 8a1b197fa6de675cb66d7b1cc25816e6 364 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 6 363 52.098 T 09-03-2017 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 BV404_RS08640 8a1b197fa6de675cb66d7b1cc25816e6 364 Gene3D G3DSA:3.40.640.10 21 261 1.0E-104 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 BV404_RS08475 c9cfd4e9f7b9c19767b64c6451d2527f 332 Pfam PF02885 Glycosyl transferase family, helical bundle domain 3 63 1.7E-15 T 09-03-2017 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 BV404_RS08475 c9cfd4e9f7b9c19767b64c6451d2527f 332 SUPERFAMILY SSF47648 1 67 8.63E-19 T 09-03-2017 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 BV404_RS08475 c9cfd4e9f7b9c19767b64c6451d2527f 332 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 3 331 39.776 T 09-03-2017 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 BV404_RS08475 c9cfd4e9f7b9c19767b64c6451d2527f 332 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 5 330 5.2E-128 T 09-03-2017 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 BV404_RS08475 c9cfd4e9f7b9c19767b64c6451d2527f 332 Gene3D G3DSA:3.40.1030.10 71 330 5.3E-101 T 09-03-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BV404_RS08475 c9cfd4e9f7b9c19767b64c6451d2527f 332 SUPERFAMILY SSF52418 70 330 2.35E-93 T 09-03-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BV404_RS08475 c9cfd4e9f7b9c19767b64c6451d2527f 332 Pfam PF00591 Glycosyl transferase family, a/b domain 72 321 9.5E-104 T 09-03-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BV404_RS08475 c9cfd4e9f7b9c19767b64c6451d2527f 332 Gene3D G3DSA:1.20.970.10 2 68 3.8E-25 T 09-03-2017 BV404_RS07695 e41c62eff27b559b7c97fa94747f4639 165 Pfam PF13420 Acetyltransferase (GNAT) domain 3 152 8.9E-25 T 09-03-2017 BV404_RS07695 e41c62eff27b559b7c97fa94747f4639 165 SUPERFAMILY SSF55729 1 160 1.65E-25 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS07695 e41c62eff27b559b7c97fa94747f4639 165 Gene3D G3DSA:3.40.630.30 1 162 4.4E-34 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS07370 5c1fb27a6483c779a016f8a5200e35a6 598 ProSitePatterns PS00211 ABC transporters family signature. 496 510 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS07370 5c1fb27a6483c779a016f8a5200e35a6 598 Gene3D G3DSA:3.40.50.300 361 593 9.2E-74 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS07370 5c1fb27a6483c779a016f8a5200e35a6 598 SUPERFAMILY SSF90123 12 345 1.03E-57 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 BV404_RS07370 5c1fb27a6483c779a016f8a5200e35a6 598 Gene3D G3DSA:1.20.1560.10 12 345 5.5E-56 T 09-03-2017 BV404_RS07370 5c1fb27a6483c779a016f8a5200e35a6 598 SMART SM00382 385 568 9.0E-12 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS07370 5c1fb27a6483c779a016f8a5200e35a6 598 Pfam PF00005 ABC transporter 376 524 4.3E-33 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS07370 5c1fb27a6483c779a016f8a5200e35a6 598 SUPERFAMILY SSF52540 356 592 3.76E-81 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS07370 5c1fb27a6483c779a016f8a5200e35a6 598 Pfam PF00664 ABC transporter transmembrane region 31 312 1.4E-31 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 BV404_RS02170 003362c04e5cfe0a80c4a7b2319bd5fd 1026 SUPERFAMILY SSF82693 41 133 4.19E-23 T 09-03-2017 BV404_RS02170 003362c04e5cfe0a80c4a7b2319bd5fd 1026 SUPERFAMILY SSF82866 788 1023 1.11E-48 T 09-03-2017 BV404_RS02170 003362c04e5cfe0a80c4a7b2319bd5fd 1026 Pfam PF00873 AcrB/AcrD/AcrF family 6 1021 6.5E-171 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS02170 003362c04e5cfe0a80c4a7b2319bd5fd 1026 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.5E-28 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS02170 003362c04e5cfe0a80c4a7b2319bd5fd 1026 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.5E-28 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS02170 003362c04e5cfe0a80c4a7b2319bd5fd 1026 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.5E-28 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS02170 003362c04e5cfe0a80c4a7b2319bd5fd 1026 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 1.5E-28 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS02170 003362c04e5cfe0a80c4a7b2319bd5fd 1026 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 1.5E-28 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS02170 003362c04e5cfe0a80c4a7b2319bd5fd 1026 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 1.5E-28 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS02170 003362c04e5cfe0a80c4a7b2319bd5fd 1026 Gene3D G3DSA:1.20.1640.10 284 497 1.9E-49 T 09-03-2017 BV404_RS02170 003362c04e5cfe0a80c4a7b2319bd5fd 1026 Gene3D G3DSA:1.10.3850.10 795 1022 1.7E-56 T 09-03-2017 BV404_RS02170 003362c04e5cfe0a80c4a7b2319bd5fd 1026 Gene3D G3DSA:3.30.70.1430 41 136 2.2E-24 T 09-03-2017 BV404_RS02170 003362c04e5cfe0a80c4a7b2319bd5fd 1026 SUPERFAMILY SSF82693 143 181 5.23E-11 T 09-03-2017 BV404_RS02170 003362c04e5cfe0a80c4a7b2319bd5fd 1026 SUPERFAMILY SSF82693 267 325 5.23E-11 T 09-03-2017 BV404_RS02170 003362c04e5cfe0a80c4a7b2319bd5fd 1026 Gene3D G3DSA:3.30.2090.10 707 787 8.2E-7 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BV404_RS02170 003362c04e5cfe0a80c4a7b2319bd5fd 1026 SUPERFAMILY SSF82714 184 264 4.45E-11 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BV404_RS02170 003362c04e5cfe0a80c4a7b2319bd5fd 1026 Gene3D G3DSA:3.30.2090.10 185 264 1.1E-9 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BV404_RS02170 003362c04e5cfe0a80c4a7b2319bd5fd 1026 SUPERFAMILY SSF82866 289 491 1.31E-40 T 09-03-2017 BV404_RS02170 003362c04e5cfe0a80c4a7b2319bd5fd 1026 SUPERFAMILY SSF82714 706 788 7.98E-7 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BV404_RS14570 26cc317a5c8ec9f513f9394712bb5f9e 247 ProSitePatterns PS01218 TatC family signature. 154 173 - T 09-03-2017 IPR019820 Sec-independent periplasmic protein translocase, conserved site BV404_RS14570 26cc317a5c8ec9f513f9394712bb5f9e 247 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 4 240 18.158 T 09-03-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BV404_RS14570 26cc317a5c8ec9f513f9394712bb5f9e 247 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 9 226 3.3E-76 T 09-03-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BV404_RS14570 26cc317a5c8ec9f513f9394712bb5f9e 247 Pfam PF00902 Sec-independent protein translocase protein (TatC) 12 221 4.8E-66 T 09-03-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BV404_RS14570 26cc317a5c8ec9f513f9394712bb5f9e 247 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 103 129 2.6E-51 T 09-03-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BV404_RS14570 26cc317a5c8ec9f513f9394712bb5f9e 247 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 154 182 2.6E-51 T 09-03-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BV404_RS14570 26cc317a5c8ec9f513f9394712bb5f9e 247 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 85 103 2.6E-51 T 09-03-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BV404_RS14570 26cc317a5c8ec9f513f9394712bb5f9e 247 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 8 35 2.6E-51 T 09-03-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BV404_RS13980 db32f92e3590f86f00b34e2ee94b1cec 315 SUPERFAMILY SSF50486 208 310 3.92E-31 T 09-03-2017 IPR011034 Formyl transferase, C-terminal-like GO:0003824 BV404_RS13980 db32f92e3590f86f00b34e2ee94b1cec 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 09-03-2017 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BV404_RS13980 db32f92e3590f86f00b34e2ee94b1cec 315 Pfam PF02911 Formyl transferase, C-terminal domain 207 303 4.5E-26 T 09-03-2017 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BV404_RS13980 db32f92e3590f86f00b34e2ee94b1cec 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 312 1.6E-108 T 09-03-2017 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 BV404_RS13980 db32f92e3590f86f00b34e2ee94b1cec 315 Gene3D G3DSA:3.40.50.170 4 208 1.8E-75 T 09-03-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BV404_RS13980 db32f92e3590f86f00b34e2ee94b1cec 315 Pfam PF00551 Formyl transferase 6 183 2.6E-49 T 09-03-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BV404_RS13980 db32f92e3590f86f00b34e2ee94b1cec 315 Gene3D G3DSA:3.10.25.10 210 307 1.2E-32 T 09-03-2017 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BV404_RS13980 db32f92e3590f86f00b34e2ee94b1cec 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 306 36.987 T 09-03-2017 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 BV404_RS13980 db32f92e3590f86f00b34e2ee94b1cec 315 SUPERFAMILY SSF53328 5 207 1.57E-67 T 09-03-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BV404_RS02940 8c55e8ff0ec96d149e38609862c6a3e0 344 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 146 180 5.7E-8 T 09-03-2017 IPR001451 Hexapeptide repeat BV404_RS02940 8c55e8ff0ec96d149e38609862c6a3e0 344 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 110 145 2.7E-10 T 09-03-2017 IPR001451 Hexapeptide repeat BV404_RS02940 8c55e8ff0ec96d149e38609862c6a3e0 344 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 330 2.9E-120 T 09-03-2017 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 BV404_RS02940 8c55e8ff0ec96d149e38609862c6a3e0 344 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 24 88 9.9E-24 T 09-03-2017 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 BV404_RS02940 8c55e8ff0ec96d149e38609862c6a3e0 344 Gene3D G3DSA:2.160.10.10 143 309 1.2E-39 T 09-03-2017 BV404_RS02940 8c55e8ff0ec96d149e38609862c6a3e0 344 Gene3D G3DSA:2.160.10.10 101 142 5.4E-12 T 09-03-2017 BV404_RS02940 8c55e8ff0ec96d149e38609862c6a3e0 344 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 5 327 35.813 T 09-03-2017 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 BV404_RS02940 8c55e8ff0ec96d149e38609862c6a3e0 344 SUPERFAMILY SSF51161 32 317 1.98E-86 T 09-03-2017 IPR011004 Trimeric LpxA-like BV404_RS12460 a1d82f35fd7d9d426674f6878d9c7d54 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.582 T 09-03-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS12460 a1d82f35fd7d9d426674f6878d9c7d54 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 09-03-2017 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS12460 a1d82f35fd7d9d426674f6878d9c7d54 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 2.0E-18 T 09-03-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS12460 a1d82f35fd7d9d426674f6878d9c7d54 85 Pfam PF01016 Ribosomal L27 protein 2 82 1.1E-39 T 09-03-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS12460 a1d82f35fd7d9d426674f6878d9c7d54 85 SUPERFAMILY SSF110324 2 80 8.72E-35 T 09-03-2017 BV404_RS12460 a1d82f35fd7d9d426674f6878d9c7d54 85 Gene3D G3DSA:2.40.50.100 20 82 1.6E-32 T 09-03-2017 BV404_RS12460 a1d82f35fd7d9d426674f6878d9c7d54 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.3E-39 T 09-03-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS12460 a1d82f35fd7d9d426674f6878d9c7d54 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.3E-39 T 09-03-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS12460 a1d82f35fd7d9d426674f6878d9c7d54 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.3E-39 T 09-03-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS12460 a1d82f35fd7d9d426674f6878d9c7d54 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 7.1E-44 T 09-03-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS16955 627dd13f20a38c750d559b0222608010 66 SUPERFAMILY SSF53383 4 65 3.39E-14 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase BV404_RS16955 627dd13f20a38c750d559b0222608010 66 Gene3D G3DSA:3.90.1150.10 5 66 6.0E-18 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 BV404_RS04705 2c8b6d9e6da48f2a45e6896f654bef44 118 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 11 118 14.145 T 09-03-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BV404_RS04705 2c8b6d9e6da48f2a45e6896f654bef44 118 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 46 117 6.8E-14 T 09-03-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BV404_RS04705 2c8b6d9e6da48f2a45e6896f654bef44 118 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 82 98 8.2E-10 T 09-03-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BV404_RS04705 2c8b6d9e6da48f2a45e6896f654bef44 118 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 48 64 8.2E-10 T 09-03-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BV404_RS04705 2c8b6d9e6da48f2a45e6896f654bef44 118 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 103 116 8.2E-10 T 09-03-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BV404_RS04705 2c8b6d9e6da48f2a45e6896f654bef44 118 Pfam PF02049 Flagellar hook-basal body complex protein FliE 44 118 2.0E-23 T 09-03-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BV404_RS04480 23f7728de108367471e674350417ef8a 291 SUPERFAMILY SSF54427 171 290 4.21E-14 T 09-03-2017 IPR032710 NTF2-like domain BV404_RS04480 23f7728de108367471e674350417ef8a 291 SMART SM00978 160 291 6.5E-33 T 09-03-2017 IPR007379 Tim44-like domain BV404_RS04480 23f7728de108367471e674350417ef8a 291 Pfam PF04280 Tim44-like domain 169 290 1.4E-13 T 09-03-2017 IPR007379 Tim44-like domain BV404_RS08310 dd47b95704084d5db375c463287d741d 562 SMART SM01274 78 258 3.5E-104 T 09-03-2017 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 BV404_RS08310 dd47b95704084d5db375c463287d741d 562 Pfam PF03949 Malic enzyme, NAD binding domain 268 528 5.6E-105 T 09-03-2017 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 BV404_RS08310 dd47b95704084d5db375c463287d741d 562 PRINTS PR00072 Malic enzyme signature 144 173 3.1E-72 T 09-03-2017 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 BV404_RS08310 dd47b95704084d5db375c463287d741d 562 PRINTS PR00072 Malic enzyme signature 180 202 3.1E-72 T 09-03-2017 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 BV404_RS08310 dd47b95704084d5db375c463287d741d 562 PRINTS PR00072 Malic enzyme signature 264 280 3.1E-72 T 09-03-2017 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 BV404_RS08310 dd47b95704084d5db375c463287d741d 562 PRINTS PR00072 Malic enzyme signature 84 108 3.1E-72 T 09-03-2017 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 BV404_RS08310 dd47b95704084d5db375c463287d741d 562 PRINTS PR00072 Malic enzyme signature 295 311 3.1E-72 T 09-03-2017 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 BV404_RS08310 dd47b95704084d5db375c463287d741d 562 PRINTS PR00072 Malic enzyme signature 239 257 3.1E-72 T 09-03-2017 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 BV404_RS08310 dd47b95704084d5db375c463287d741d 562 PRINTS PR00072 Malic enzyme signature 405 421 3.1E-72 T 09-03-2017 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 BV404_RS08310 dd47b95704084d5db375c463287d741d 562 SUPERFAMILY SSF53223 4 267 3.96E-108 T 09-03-2017 BV404_RS08310 dd47b95704084d5db375c463287d741d 562 SMART SM00919 268 528 9.0E-135 T 09-03-2017 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 BV404_RS08310 dd47b95704084d5db375c463287d741d 562 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 1 562 72.52 T 09-03-2017 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38 BV404_RS08310 dd47b95704084d5db375c463287d741d 562 ProSitePatterns PS00331 Malic enzymes signature. 264 280 - T 09-03-2017 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 BV404_RS08310 dd47b95704084d5db375c463287d741d 562 SUPERFAMILY SSF51735 268 559 1.61E-95 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS08310 dd47b95704084d5db375c463287d741d 562 Pfam PF00390 Malic enzyme, N-terminal domain 78 258 4.6E-77 T 09-03-2017 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 BV404_RS08310 dd47b95704084d5db375c463287d741d 562 Gene3D G3DSA:3.40.50.720 266 559 5.1E-110 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS08310 dd47b95704084d5db375c463287d741d 562 PIRSF PIRSF000106 2 560 1.4E-225 T 09-03-2017 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 BV404_RS08310 dd47b95704084d5db375c463287d741d 562 Gene3D G3DSA:3.40.50.10380 14 265 1.4E-114 T 09-03-2017 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 BV404_RS06665 6713c2d665aa9eb45ab22f9cc7df56c4 217 SUPERFAMILY SSF55469 1 216 8.11E-64 T 09-03-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BV404_RS06665 6713c2d665aa9eb45ab22f9cc7df56c4 217 Pfam PF00881 Nitroreductase family 8 193 3.2E-29 T 09-03-2017 IPR029479 Nitroreductase Reactome: R-HSA-209968 BV404_RS06665 6713c2d665aa9eb45ab22f9cc7df56c4 217 Gene3D G3DSA:3.40.109.10 1 215 7.1E-62 T 09-03-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BV404_RS01050 a7cce014599a851da5a362b0f6ba5fe0 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 32.753 T 09-03-2017 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 BV404_RS01050 a7cce014599a851da5a362b0f6ba5fe0 129 SUPERFAMILY SSF53137 14 129 6.54E-48 T 09-03-2017 BV404_RS01050 a7cce014599a851da5a362b0f6ba5fe0 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 4.2E-55 T 09-03-2017 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS01050 a7cce014599a851da5a362b0f6ba5fe0 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 09-03-2017 IPR018102 Ribosomal S11, conserved site BV404_RS01050 a7cce014599a851da5a362b0f6ba5fe0 129 Pfam PF00411 Ribosomal protein S11 19 128 1.5E-52 T 09-03-2017 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 BV404_RS01050 a7cce014599a851da5a362b0f6ba5fe0 129 PIRSF PIRSF002131 1 129 1.8E-52 T 09-03-2017 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 BV404_RS01050 a7cce014599a851da5a362b0f6ba5fe0 129 Gene3D G3DSA:3.30.420.80 7 129 1.6E-53 T 09-03-2017 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 BV404_RS00335 716d77025761b377c7657f4762a86f0b 202 SUPERFAMILY SSF51569 2 201 1.26E-67 T 09-03-2017 BV404_RS00335 716d77025761b377c7657f4762a86f0b 202 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 09-03-2017 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 BV404_RS00335 716d77025761b377c7657f4762a86f0b 202 Pfam PF01081 KDPG and KHG aldolase 5 198 2.0E-75 T 09-03-2017 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 BV404_RS00335 716d77025761b377c7657f4762a86f0b 202 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 09-03-2017 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 BV404_RS00335 716d77025761b377c7657f4762a86f0b 202 Gene3D G3DSA:3.20.20.70 1 201 3.0E-77 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS00335 716d77025761b377c7657f4762a86f0b 202 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 5 201 1.1E-85 T 09-03-2017 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 BV404_RS03125 67c74bda93b77f0769b913842956b35a 544 Gene3D G3DSA:3.40.720.10 380 531 3.1E-13 T 09-03-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 BV404_RS03125 67c74bda93b77f0769b913842956b35a 544 Pfam PF08019 Domain of unknown function (DUF1705) 60 209 1.2E-45 T 09-03-2017 IPR012549 Domain of unknown function DUF1705 GO:0016021 BV404_RS03125 67c74bda93b77f0769b913842956b35a 544 SUPERFAMILY SSF53649 239 530 6.54E-19 T 09-03-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 BV404_RS03125 67c74bda93b77f0769b913842956b35a 544 Pfam PF00884 Sulfatase 237 525 7.9E-47 T 09-03-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 BV404_RS08270 0c6f3052ffe479431be950fbbf170d2a 425 Pfam PF01266 FAD dependent oxidoreductase 29 379 1.1E-50 T 09-03-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 BV404_RS08270 0c6f3052ffe479431be950fbbf170d2a 425 Gene3D G3DSA:3.50.50.60 16 118 2.2E-47 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS08270 0c6f3052ffe479431be950fbbf170d2a 425 Gene3D G3DSA:3.50.50.60 171 251 2.2E-47 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS08270 0c6f3052ffe479431be950fbbf170d2a 425 Gene3D G3DSA:3.50.50.60 343 399 2.2E-47 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS08270 0c6f3052ffe479431be950fbbf170d2a 425 SUPERFAMILY SSF51905 175 313 7.34E-42 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS08270 0c6f3052ffe479431be950fbbf170d2a 425 SUPERFAMILY SSF51905 6 121 7.34E-42 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS02140 2eeb1f555187ca5268db559c6b2576a3 1129 SMART SM00448 722 835 1.0E-44 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS02140 2eeb1f555187ca5268db559c6b2576a3 1129 Gene3D G3DSA:3.30.450.20 868 929 8.4E-9 T 09-03-2017 BV404_RS02140 2eeb1f555187ca5268db559c6b2576a3 1129 Gene3D G3DSA:3.30.565.10 513 686 1.2E-46 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS02140 2eeb1f555187ca5268db559c6b2576a3 1129 SUPERFAMILY SSF55785 861 929 1.4E-7 T 09-03-2017 IPR000014 PAS domain BV404_RS02140 2eeb1f555187ca5268db559c6b2576a3 1129 Pfam PF00072 Response regulator receiver domain 725 835 1.1E-31 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS02140 2eeb1f555187ca5268db559c6b2576a3 1129 SUPERFAMILY SSF47384 444 528 8.63E-19 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS02140 2eeb1f555187ca5268db559c6b2576a3 1129 Pfam PF00512 His Kinase A (phospho-acceptor) domain 460 525 2.5E-14 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS02140 2eeb1f555187ca5268db559c6b2576a3 1129 Gene3D G3DSA:3.30.450.20 233 353 4.0E-5 T 09-03-2017 BV404_RS02140 2eeb1f555187ca5268db559c6b2576a3 1129 SMART SM00091 873 938 3.9E-5 T 09-03-2017 IPR000014 PAS domain BV404_RS02140 2eeb1f555187ca5268db559c6b2576a3 1129 Gene3D G3DSA:1.10.287.130 452 512 7.4E-15 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS02140 2eeb1f555187ca5268db559c6b2576a3 1129 SUPERFAMILY SSF52172 716 849 3.27E-41 T 09-03-2017 IPR011006 CheY-like superfamily BV404_RS02140 2eeb1f555187ca5268db559c6b2576a3 1129 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 574 682 7.3E-27 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS02140 2eeb1f555187ca5268db559c6b2576a3 1129 SMART SM00388 459 527 2.5E-17 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS02140 2eeb1f555187ca5268db559c6b2576a3 1129 SUPERFAMILY SSF55874 516 685 4.32E-46 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS02140 2eeb1f555187ca5268db559c6b2576a3 1129 Gene3D G3DSA:3.40.50.2300 720 847 3.2E-42 T 09-03-2017 BV404_RS02140 2eeb1f555187ca5268db559c6b2576a3 1129 Pfam PF00672 HAMP domain 358 427 7.7E-16 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 BV404_RS02140 2eeb1f555187ca5268db559c6b2576a3 1129 SMART SM00387 573 684 1.3E-37 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS02140 2eeb1f555187ca5268db559c6b2576a3 1129 SMART SM00304 377 430 2.4E-13 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 BV404_RS02140 2eeb1f555187ca5268db559c6b2576a3 1129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 668 681 3.8E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS02140 2eeb1f555187ca5268db559c6b2576a3 1129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 644 662 3.8E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS02140 2eeb1f555187ca5268db559c6b2576a3 1129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 609 623 3.8E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS02140 2eeb1f555187ca5268db559c6b2576a3 1129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 627 637 3.8E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS02140 2eeb1f555187ca5268db559c6b2576a3 1129 SUPERFAMILY SSF158472 378 428 4.32E-11 T 09-03-2017 BV404_RS10905 91950716f370143accde7246f1f8ff35 372 SUPERFAMILY SSF51604 24 139 2.51E-10 T 09-03-2017 IPR029065 Enolase C-terminal domain-like BV404_RS10905 91950716f370143accde7246f1f8ff35 372 PIRSF PIRSF004640 1 364 3.4E-146 T 09-03-2017 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 BV404_RS10905 91950716f370143accde7246f1f8ff35 372 Pfam PF04551 GcpE protein 14 354 1.0E-131 T 09-03-2017 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 BV404_RS10905 91950716f370143accde7246f1f8ff35 372 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 352 1.0E-124 T 09-03-2017 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 BV404_RS10905 91950716f370143accde7246f1f8ff35 372 SUPERFAMILY SSF56014 265 354 1.57E-11 T 09-03-2017 BV404_RS10905 91950716f370143accde7246f1f8ff35 372 Gene3D G3DSA:3.20.20.70 30 132 7.3E-9 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS10905 91950716f370143accde7246f1f8ff35 372 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 359 34.787 T 09-03-2017 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 BV404_RS03815 f1549b34c7e3c5889b0df725a1206bfa 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 287 2.6E-146 T 09-03-2017 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 BV404_RS03815 f1549b34c7e3c5889b0df725a1206bfa 290 Gene3D G3DSA:3.40.50.261 120 287 2.4E-78 T 09-03-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BV404_RS03815 f1549b34c7e3c5889b0df725a1206bfa 290 PIRSF PIRSF001553 1 289 1.5E-134 T 09-03-2017 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 BV404_RS03815 f1549b34c7e3c5889b0df725a1206bfa 290 SUPERFAMILY SSF51735 1 122 4.19E-43 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS03815 f1549b34c7e3c5889b0df725a1206bfa 290 Pfam PF02629 CoA binding domain 6 99 5.0E-31 T 09-03-2017 IPR003781 CoA-binding GO:0048037 BV404_RS03815 f1549b34c7e3c5889b0df725a1206bfa 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 2.5E-40 T 09-03-2017 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 BV404_RS03815 f1549b34c7e3c5889b0df725a1206bfa 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 2.5E-40 T 09-03-2017 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 BV404_RS03815 f1549b34c7e3c5889b0df725a1206bfa 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 2.5E-40 T 09-03-2017 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 BV404_RS03815 f1549b34c7e3c5889b0df725a1206bfa 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 2.5E-40 T 09-03-2017 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 BV404_RS03815 f1549b34c7e3c5889b0df725a1206bfa 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 09-03-2017 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 BV404_RS03815 f1549b34c7e3c5889b0df725a1206bfa 290 SUPERFAMILY SSF52210 123 286 9.16E-57 T 09-03-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BV404_RS03815 f1549b34c7e3c5889b0df725a1206bfa 290 Gene3D G3DSA:3.40.50.720 2 119 1.5E-56 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS03815 f1549b34c7e3c5889b0df725a1206bfa 290 Pfam PF00549 CoA-ligase 151 270 1.0E-21 T 09-03-2017 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BV404_RS03815 f1549b34c7e3c5889b0df725a1206bfa 290 SMART SM00881 4 100 6.0E-36 T 09-03-2017 IPR003781 CoA-binding GO:0048037 BV404_RS03815 f1549b34c7e3c5889b0df725a1206bfa 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 09-03-2017 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site BV404_RS02030 d7d9e94e25391f47a8b7a137d8646251 149 SUPERFAMILY SSF109635 8 108 5.62E-37 T 09-03-2017 BV404_RS02030 d7d9e94e25391f47a8b7a137d8646251 149 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 30 138 5.8E-51 T 09-03-2017 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 BV404_RS02030 d7d9e94e25391f47a8b7a137d8646251 149 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 112 136 - T 09-03-2017 IPR020458 Zinc finger, DksA/TraR C4-type conserved site BV404_RS02030 d7d9e94e25391f47a8b7a137d8646251 149 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 109 141 3.7E-10 T 09-03-2017 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 BV404_RS02030 d7d9e94e25391f47a8b7a137d8646251 149 SUPERFAMILY SSF57716 109 147 5.27E-10 T 09-03-2017 BV404_RS02030 d7d9e94e25391f47a8b7a137d8646251 149 PRINTS PR00618 DksA/TraR zinc finger signature 124 136 9.8E-5 T 09-03-2017 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria BV404_RS02030 d7d9e94e25391f47a8b7a137d8646251 149 PRINTS PR00618 DksA/TraR zinc finger signature 112 123 9.8E-5 T 09-03-2017 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria BV404_RS02030 d7d9e94e25391f47a8b7a137d8646251 149 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 26 148 29.904 T 09-03-2017 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 BV404_RS13365 2ca460a021e819f4aa74bdfc34df6be0 308 SUPERFAMILY SSF52283 23 103 5.16E-9 T 09-03-2017 BV404_RS13365 2ca460a021e819f4aa74bdfc34df6be0 308 SUPERFAMILY SSF51735 94 274 2.71E-39 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS13365 2ca460a021e819f4aa74bdfc34df6be0 308 Gene3D G3DSA:3.40.50.720 120 276 1.4E-28 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS13365 2ca460a021e819f4aa74bdfc34df6be0 308 Gene3D G3DSA:3.40.50.720 9 119 6.4E-18 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS13365 2ca460a021e819f4aa74bdfc34df6be0 308 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 100 273 2.4E-40 T 09-03-2017 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 BV404_RS06500 8ed830f52957c27237c22e076720cd4b 627 SMART SM00304 353 403 8.9 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 BV404_RS06500 8ed830f52957c27237c22e076720cd4b 627 SMART SM00304 296 350 8.2E-10 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 BV404_RS06500 8ed830f52957c27237c22e076720cd4b 627 SMART SM00283 358 626 5.4E-63 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 BV404_RS06500 8ed830f52957c27237c22e076720cd4b 627 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 429 625 6.3E-47 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 BV404_RS06500 8ed830f52957c27237c22e076720cd4b 627 SUPERFAMILY SSF58104 318 627 1.7E-76 T 09-03-2017 BV404_RS06500 8ed830f52957c27237c22e076720cd4b 627 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 463 490 2.2E-22 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 BV404_RS06500 8ed830f52957c27237c22e076720cd4b 627 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 273 293 2.2E-22 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 BV404_RS06500 8ed830f52957c27237c22e076720cd4b 627 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 492 521 2.2E-22 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 BV404_RS06500 8ed830f52957c27237c22e076720cd4b 627 SUPERFAMILY SSF103190 89 175 5.23E-11 T 09-03-2017 IPR029151 Periplasmic sensor domain-like BV404_RS06500 8ed830f52957c27237c22e076720cd4b 627 Gene3D G3DSA:1.10.287.950 380 597 8.4E-56 T 09-03-2017 BV404_RS06500 8ed830f52957c27237c22e076720cd4b 627 Gene3D G3DSA:3.30.450.20 134 273 9.6E-31 T 09-03-2017 BV404_RS06500 8ed830f52957c27237c22e076720cd4b 627 Pfam PF02743 Cache domain 40 258 6.2E-32 T 09-03-2017 IPR033479 Double Cache domain 1 BV404_RS06500 8ed830f52957c27237c22e076720cd4b 627 Pfam PF00672 HAMP domain 278 346 1.3E-12 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 BV404_RS11090 3db172fd01de72b9e4004f6f42bda2a7 304 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 301 38.809 T 09-03-2017 IPR007476 Putative exonuclease, RdgC GO:0006310 BV404_RS11090 3db172fd01de72b9e4004f6f42bda2a7 304 Pfam PF04381 Putative exonuclease, RdgC 1 298 6.9E-124 T 09-03-2017 IPR007476 Putative exonuclease, RdgC GO:0006310 BV404_RS09895 3787b982929aa1b4626cf4766038b31a 378 Gene3D G3DSA:2.30.40.10 2 54 3.1E-10 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 BV404_RS09895 3787b982929aa1b4626cf4766038b31a 378 Gene3D G3DSA:2.30.40.10 347 363 3.1E-10 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 BV404_RS09895 3787b982929aa1b4626cf4766038b31a 378 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 374 3.4E-158 T 09-03-2017 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 BV404_RS09895 3787b982929aa1b4626cf4766038b31a 378 Gene3D G3DSA:3.20.20.140 55 346 8.8E-101 T 09-03-2017 BV404_RS09895 3787b982929aa1b4626cf4766038b31a 378 Pfam PF01979 Amidohydrolase family 51 374 1.1E-37 T 09-03-2017 IPR006680 Amidohydrolase-related GO:0016787 BV404_RS09895 3787b982929aa1b4626cf4766038b31a 378 SUPERFAMILY SSF51556 54 347 4.42E-101 T 09-03-2017 IPR032466 Metal-dependent hydrolase BV404_RS09895 3787b982929aa1b4626cf4766038b31a 378 PIRSF PIRSF038994 1 378 4.4E-120 T 09-03-2017 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 BV404_RS09895 3787b982929aa1b4626cf4766038b31a 378 SUPERFAMILY SSF51338 1 53 6.48E-19 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 BV404_RS09530 900427190c81eb5a0710b20608bf7280 232 ProSitePatterns PS00221 MIP family signature. 60 68 - T 09-03-2017 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 BV404_RS09530 900427190c81eb5a0710b20608bf7280 232 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 222 2.5E-62 T 09-03-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 BV404_RS09530 900427190c81eb5a0710b20608bf7280 232 PRINTS PR00783 Major intrinsic protein family signature 42 66 7.7E-52 T 09-03-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 BV404_RS09530 900427190c81eb5a0710b20608bf7280 232 PRINTS PR00783 Major intrinsic protein family signature 2 21 7.7E-52 T 09-03-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 BV404_RS09530 900427190c81eb5a0710b20608bf7280 232 PRINTS PR00783 Major intrinsic protein family signature 79 98 7.7E-52 T 09-03-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 BV404_RS09530 900427190c81eb5a0710b20608bf7280 232 PRINTS PR00783 Major intrinsic protein family signature 136 154 7.7E-52 T 09-03-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 BV404_RS09530 900427190c81eb5a0710b20608bf7280 232 PRINTS PR00783 Major intrinsic protein family signature 166 188 7.7E-52 T 09-03-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 BV404_RS09530 900427190c81eb5a0710b20608bf7280 232 PRINTS PR00783 Major intrinsic protein family signature 205 225 7.7E-52 T 09-03-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 BV404_RS09530 900427190c81eb5a0710b20608bf7280 232 Pfam PF00230 Major intrinsic protein 2 222 4.4E-51 T 09-03-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 BV404_RS09530 900427190c81eb5a0710b20608bf7280 232 Gene3D G3DSA:1.20.1080.10 1 228 9.7E-69 T 09-03-2017 IPR023271 Aquaporin-like Reactome: R-HSA-432047 BV404_RS09530 900427190c81eb5a0710b20608bf7280 232 Hamap MF_01146 Aquaporin Z [aqpZ]. 1 229 35.634 T 09-03-2017 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 BV404_RS09530 900427190c81eb5a0710b20608bf7280 232 SUPERFAMILY SSF81338 2 226 2.49E-69 T 09-03-2017 IPR023271 Aquaporin-like Reactome: R-HSA-432047 BV404_RS06000 a494779a4192a6ba8136ac5091f18e03 358 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 343 358 7.9E-5 T 09-03-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BV404_RS06000 a494779a4192a6ba8136ac5091f18e03 358 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 67 87 7.9E-5 T 09-03-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BV404_RS06000 a494779a4192a6ba8136ac5091f18e03 358 Pfam PF13533 Biotin-lipoyl like 60 101 1.3E-14 T 09-03-2017 BV404_RS06000 a494779a4192a6ba8136ac5091f18e03 358 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 351 4.7E-67 T 09-03-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 BV404_RS06000 a494779a4192a6ba8136ac5091f18e03 358 Gene3D G3DSA:2.40.50.100 150 181 6.5E-20 T 09-03-2017 BV404_RS06000 a494779a4192a6ba8136ac5091f18e03 358 Gene3D G3DSA:2.40.50.100 59 89 6.5E-20 T 09-03-2017 BV404_RS06000 a494779a4192a6ba8136ac5091f18e03 358 SUPERFAMILY SSF111369 48 265 3.4E-31 T 09-03-2017 BV404_RS06000 a494779a4192a6ba8136ac5091f18e03 358 Pfam PF13437 HlyD family secretion protein 153 250 5.4E-9 T 09-03-2017 BV404_RS05660 28060d495cce44f1b717cea5e1bb8957 430 Gene3D G3DSA:3.40.50.1980 28 237 1.5E-81 T 09-03-2017 BV404_RS05660 28060d495cce44f1b717cea5e1bb8957 430 SUPERFAMILY SSF53720 4 424 5.49E-90 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 BV404_RS05660 28060d495cce44f1b717cea5e1bb8957 430 PRINTS PR00083 Histidinol dehydrogenase signature 317 342 1.4E-101 T 09-03-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BV404_RS05660 28060d495cce44f1b717cea5e1bb8957 430 PRINTS PR00083 Histidinol dehydrogenase signature 134 160 1.4E-101 T 09-03-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BV404_RS05660 28060d495cce44f1b717cea5e1bb8957 430 PRINTS PR00083 Histidinol dehydrogenase signature 195 220 1.4E-101 T 09-03-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BV404_RS05660 28060d495cce44f1b717cea5e1bb8957 430 PRINTS PR00083 Histidinol dehydrogenase signature 358 376 1.4E-101 T 09-03-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BV404_RS05660 28060d495cce44f1b717cea5e1bb8957 430 PRINTS PR00083 Histidinol dehydrogenase signature 165 191 1.4E-101 T 09-03-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BV404_RS05660 28060d495cce44f1b717cea5e1bb8957 430 PRINTS PR00083 Histidinol dehydrogenase signature 227 248 1.4E-101 T 09-03-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BV404_RS05660 28060d495cce44f1b717cea5e1bb8957 430 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 1.4E-101 T 09-03-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BV404_RS05660 28060d495cce44f1b717cea5e1bb8957 430 PRINTS PR00083 Histidinol dehydrogenase signature 249 268 1.4E-101 T 09-03-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BV404_RS05660 28060d495cce44f1b717cea5e1bb8957 430 PIRSF PIRSF000099 1 427 9.3E-169 T 09-03-2017 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BV404_RS05660 28060d495cce44f1b717cea5e1bb8957 430 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 227 259 - T 09-03-2017 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 BV404_RS05660 28060d495cce44f1b717cea5e1bb8957 430 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 424 41.807 T 09-03-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BV404_RS05660 28060d495cce44f1b717cea5e1bb8957 430 Pfam PF00815 Histidinol dehydrogenase 27 424 6.1E-170 T 09-03-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BV404_RS05660 28060d495cce44f1b717cea5e1bb8957 430 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 423 2.2E-165 T 09-03-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BV404_RS02055 e04991f220f2cc15b60b19dcab7f03ba 865 Gene3D G3DSA:3.30.499.10 684 859 3.4E-54 T 09-03-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 BV404_RS02055 e04991f220f2cc15b60b19dcab7f03ba 865 Gene3D G3DSA:3.30.499.10 402 519 1.1E-63 T 09-03-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 BV404_RS02055 e04991f220f2cc15b60b19dcab7f03ba 865 Gene3D G3DSA:3.20.19.10 162 361 5.7E-95 T 09-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel BV404_RS02055 e04991f220f2cc15b60b19dcab7f03ba 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 853 0.0 T 09-03-2017 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 BV404_RS02055 e04991f220f2cc15b60b19dcab7f03ba 865 Gene3D G3DSA:3.40.1060.10 520 682 8.7E-85 T 09-03-2017 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 BV404_RS02055 e04991f220f2cc15b60b19dcab7f03ba 865 SUPERFAMILY SSF53732 379 860 7.32E-149 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 BV404_RS02055 e04991f220f2cc15b60b19dcab7f03ba 865 SUPERFAMILY SSF74778 2 160 4.84E-68 T 09-03-2017 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 BV404_RS02055 e04991f220f2cc15b60b19dcab7f03ba 865 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 09-03-2017 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 BV404_RS02055 e04991f220f2cc15b60b19dcab7f03ba 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 09-03-2017 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 BV404_RS02055 e04991f220f2cc15b60b19dcab7f03ba 865 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 1.7E-43 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 BV404_RS02055 e04991f220f2cc15b60b19dcab7f03ba 865 PIRSF PIRSF036687 1 859 0.0 T 09-03-2017 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 BV404_RS02055 e04991f220f2cc15b60b19dcab7f03ba 865 SUPERFAMILY SSF52016 163 372 8.24E-72 T 09-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel BV404_RS02055 e04991f220f2cc15b60b19dcab7f03ba 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 1.2E-65 T 09-03-2017 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 BV404_RS02055 e04991f220f2cc15b60b19dcab7f03ba 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 2.3E-98 T 09-03-2017 IPR015929 Aconitase B, N-terminal GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 BV404_RS14135 52e0eeaa4aabf787d36876014d532043 468 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 466 1.6E-187 T 09-03-2017 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 BV404_RS14135 52e0eeaa4aabf787d36876014d532043 468 SUPERFAMILY SSF52540 133 344 3.9E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS14135 52e0eeaa4aabf787d36876014d532043 468 Gene3D G3DSA:3.40.50.300 126 297 1.5E-61 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS14135 52e0eeaa4aabf787d36876014d532043 468 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 467 34.554 T 09-03-2017 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 BV404_RS14135 52e0eeaa4aabf787d36876014d532043 468 Pfam PF11638 DnaA N-terminal domain 4 65 1.6E-18 T 09-03-2017 IPR024633 DnaA N-terminal domain BV404_RS14135 52e0eeaa4aabf787d36876014d532043 468 ProSitePatterns PS01008 DnaA protein signature. 426 445 - T 09-03-2017 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 BV404_RS14135 52e0eeaa4aabf787d36876014d532043 468 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 377 445 3.6E-32 T 09-03-2017 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 BV404_RS14135 52e0eeaa4aabf787d36876014d532043 468 Gene3D G3DSA:1.10.1750.10 367 467 1.6E-42 T 09-03-2017 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 BV404_RS14135 52e0eeaa4aabf787d36876014d532043 468 SMART SM00382 165 378 4.5E-7 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS14135 52e0eeaa4aabf787d36876014d532043 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 166 186 1.7E-54 T 09-03-2017 IPR020591 Chromosomal replication control, initiator DnaA-like BV404_RS14135 52e0eeaa4aabf787d36876014d532043 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 198 212 1.7E-54 T 09-03-2017 IPR020591 Chromosomal replication control, initiator DnaA-like BV404_RS14135 52e0eeaa4aabf787d36876014d532043 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 230 244 1.7E-54 T 09-03-2017 IPR020591 Chromosomal replication control, initiator DnaA-like BV404_RS14135 52e0eeaa4aabf787d36876014d532043 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 264 291 1.7E-54 T 09-03-2017 IPR020591 Chromosomal replication control, initiator DnaA-like BV404_RS14135 52e0eeaa4aabf787d36876014d532043 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 426 445 1.7E-54 T 09-03-2017 IPR020591 Chromosomal replication control, initiator DnaA-like BV404_RS14135 52e0eeaa4aabf787d36876014d532043 468 SMART SM00760 376 445 9.0E-45 T 09-03-2017 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 BV404_RS14135 52e0eeaa4aabf787d36876014d532043 468 Gene3D G3DSA:1.10.8.60 299 366 9.3E-32 T 09-03-2017 BV404_RS14135 52e0eeaa4aabf787d36876014d532043 468 SUPERFAMILY SSF48295 364 467 7.85E-38 T 09-03-2017 IPR010921 Trp repressor/replication initiator GO:0043565 BV404_RS14135 52e0eeaa4aabf787d36876014d532043 468 Pfam PF00308 Bacterial dnaA protein 134 350 1.9E-98 T 09-03-2017 IPR013317 Chromosomal replication initiator protein DnaA BV404_RS12960 e0356f429cc88e4eedc86317c314b7c2 370 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 189 200 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BV404_RS12960 e0356f429cc88e4eedc86317c314b7c2 370 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 3 311 50.904 T 09-03-2017 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 BV404_RS12960 e0356f429cc88e4eedc86317c314b7c2 370 Pfam PF13484 4Fe-4S double cluster binding domain 188 252 3.5E-20 T 09-03-2017 BV404_RS12960 e0356f429cc88e4eedc86317c314b7c2 370 Gene3D G3DSA:3.30.70.20 186 253 2.3E-8 T 09-03-2017 BV404_RS12960 e0356f429cc88e4eedc86317c314b7c2 370 Pfam PF08331 Domain of unknown function (DUF1730) 58 136 9.5E-24 T 09-03-2017 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 BV404_RS12960 e0356f429cc88e4eedc86317c314b7c2 370 SUPERFAMILY SSF54862 165 307 6.7E-21 T 09-03-2017 BV404_RS12960 e0356f429cc88e4eedc86317c314b7c2 370 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 10 343 7.7E-153 T 09-03-2017 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 BV404_RS04125 3cc30bcc2a34101ddb10da7d96aad3ac 321 Pfam PF03547 Membrane transport protein 8 147 4.5E-10 T 09-03-2017 IPR004776 Membrane transport protein GO:0016021|GO:0055085 BV404_RS04125 3cc30bcc2a34101ddb10da7d96aad3ac 321 Pfam PF03547 Membrane transport protein 166 310 5.2E-9 T 09-03-2017 IPR004776 Membrane transport protein GO:0016021|GO:0055085 BV404_RS05630 d8bc66e039ef69bdf54425f5c70368c8 372 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 11 368 40.107 T 09-03-2017 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 BV404_RS05630 d8bc66e039ef69bdf54425f5c70368c8 372 Pfam PF03054 tRNA methyl transferase 11 367 6.2E-143 T 09-03-2017 BV404_RS05630 d8bc66e039ef69bdf54425f5c70368c8 372 SUPERFAMILY SSF52402 9 251 1.1E-56 T 09-03-2017 BV404_RS05630 d8bc66e039ef69bdf54425f5c70368c8 372 Gene3D G3DSA:2.40.30.10 289 370 1.2E-33 T 09-03-2017 BV404_RS05630 d8bc66e039ef69bdf54425f5c70368c8 372 Gene3D G3DSA:3.40.50.620 6 218 2.8E-98 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS05630 d8bc66e039ef69bdf54425f5c70368c8 372 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 11 367 1.4E-152 T 09-03-2017 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 BV404_RS05630 d8bc66e039ef69bdf54425f5c70368c8 372 Gene3D G3DSA:2.30.30.280 220 287 5.2E-33 T 09-03-2017 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 Reactome: R-HSA-6787450 BV404_RS13010 89d782df0f3ecd1fdc45226a01d50318 181 SMART SM00479 7 180 5.3E-20 T 09-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III BV404_RS13010 89d782df0f3ecd1fdc45226a01d50318 181 Pfam PF00929 Exonuclease 9 170 1.8E-35 T 09-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III BV404_RS13010 89d782df0f3ecd1fdc45226a01d50318 181 Gene3D G3DSA:3.30.420.10 4 179 4.4E-75 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 BV404_RS13010 89d782df0f3ecd1fdc45226a01d50318 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 43.453 T 09-03-2017 IPR022894 Oligoribonuclease GO:0016788 BV404_RS13010 89d782df0f3ecd1fdc45226a01d50318 181 SUPERFAMILY SSF53098 3 180 1.34E-50 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 BV404_RS10250 137190e785e6f8102039feccef276fc5 188 Pfam PF03608 PTS system enzyme II sorbitol-specific factor 7 170 1.3E-72 T 09-03-2017 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 BV404_RS10250 137190e785e6f8102039feccef276fc5 188 PIRSF PIRSF038321 1 181 2.9E-84 T 09-03-2017 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 BV404_RS10250 137190e785e6f8102039feccef276fc5 188 TIGRFAM TIGR00821 EII-GUT: PTS system, glucitol/sorbitol-specific, IIC component 1 179 4.9E-95 T 09-03-2017 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 BV404_RS11520 5657dffa8bf99588a9d222a6101636f2 781 Pfam PF00072 Response regulator receiver domain 528 637 1.8E-16 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS11520 5657dffa8bf99588a9d222a6101636f2 781 SUPERFAMILY SSF52172 525 643 3.42E-26 T 09-03-2017 IPR011006 CheY-like superfamily BV404_RS11520 5657dffa8bf99588a9d222a6101636f2 781 SUPERFAMILY SSF47226 669 779 3.66E-27 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 BV404_RS11520 5657dffa8bf99588a9d222a6101636f2 781 Gene3D G3DSA:3.30.450.20 142 267 4.8E-22 T 09-03-2017 BV404_RS11520 5657dffa8bf99588a9d222a6101636f2 781 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 448 7.2E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS11520 5657dffa8bf99588a9d222a6101636f2 781 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 507 7.2E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS11520 5657dffa8bf99588a9d222a6101636f2 781 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 488 7.2E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS11520 5657dffa8bf99588a9d222a6101636f2 781 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 462 7.2E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS11520 5657dffa8bf99588a9d222a6101636f2 781 Gene3D G3DSA:1.20.120.160 681 779 2.9E-32 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 BV404_RS11520 5657dffa8bf99588a9d222a6101636f2 781 Gene3D G3DSA:1.10.287.970 1 89 1.0E-38 T 09-03-2017 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain BV404_RS11520 5657dffa8bf99588a9d222a6101636f2 781 SMART SM00388 282 347 8.4E-17 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS11520 5657dffa8bf99588a9d222a6101636f2 781 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 506 2.1E-25 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS11520 5657dffa8bf99588a9d222a6101636f2 781 PIRSF PIRSF003182 1 781 0.0 T 09-03-2017 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 BV404_RS11520 5657dffa8bf99588a9d222a6101636f2 781 Pfam PF00989 PAS fold 157 266 4.7E-17 T 09-03-2017 IPR013767 PAS fold GO:0006355 BV404_RS11520 5657dffa8bf99588a9d222a6101636f2 781 SMART SM00091 155 221 3.7E-8 T 09-03-2017 IPR000014 PAS domain BV404_RS11520 5657dffa8bf99588a9d222a6101636f2 781 SMART SM00387 394 510 8.5E-33 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS11520 5657dffa8bf99588a9d222a6101636f2 781 Gene3D G3DSA:3.30.565.10 355 506 1.2E-40 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS11520 5657dffa8bf99588a9d222a6101636f2 781 SMART SM00448 526 637 3.8E-21 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS11520 5657dffa8bf99588a9d222a6101636f2 781 SUPERFAMILY SSF47384 270 347 1.55E-16 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS11520 5657dffa8bf99588a9d222a6101636f2 781 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 345 6.1E-13 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS11520 5657dffa8bf99588a9d222a6101636f2 781 Gene3D G3DSA:1.10.287.130 274 343 1.2E-16 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS11520 5657dffa8bf99588a9d222a6101636f2 781 SUPERFAMILY SSF55874 336 506 1.28E-39 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS11520 5657dffa8bf99588a9d222a6101636f2 781 SUPERFAMILY SSF55785 140 267 1.01E-23 T 09-03-2017 IPR000014 PAS domain BV404_RS11520 5657dffa8bf99588a9d222a6101636f2 781 SMART SM00073 680 777 5.0E-9 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 BV404_RS11520 5657dffa8bf99588a9d222a6101636f2 781 Pfam PF01627 Hpt domain 691 762 5.1E-10 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 BV404_RS11520 5657dffa8bf99588a9d222a6101636f2 781 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 276 9.6E-18 T 09-03-2017 IPR000014 PAS domain BV404_RS11520 5657dffa8bf99588a9d222a6101636f2 781 Gene3D G3DSA:3.40.50.2300 515 643 6.4E-28 T 09-03-2017 BV404_RS10305 efa0cedd474f997e14623f1be9cfa2b0 499 SMART SM00387 407 499 1.2E-5 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS10305 efa0cedd474f997e14623f1be9cfa2b0 499 Pfam PF05231 MASE1 14 276 6.6E-19 T 09-03-2017 IPR007895 MASE1 BV404_RS10305 efa0cedd474f997e14623f1be9cfa2b0 499 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 411 497 1.8E-6 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS10305 efa0cedd474f997e14623f1be9cfa2b0 499 Pfam PF07730 Histidine kinase 304 367 8.8E-11 T 09-03-2017 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 BV404_RS10305 efa0cedd474f997e14623f1be9cfa2b0 499 Gene3D G3DSA:3.30.565.10 369 458 2.7E-6 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS10305 efa0cedd474f997e14623f1be9cfa2b0 499 SUPERFAMILY SSF55874 385 497 8.91E-15 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS08190 4b0f44bb212e88d1e4b773a022ab455b 511 Gene3D G3DSA:1.10.275.10 4 197 1.2E-74 T 09-03-2017 IPR024083 Fumarase/histidase, N-terminal BV404_RS08190 4b0f44bb212e88d1e4b773a022ab455b 511 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 504 44.38 T 09-03-2017 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BV404_RS08190 4b0f44bb212e88d1e4b773a022ab455b 511 SUPERFAMILY SSF48557 4 508 1.26E-192 T 09-03-2017 IPR008948 L-Aspartase-like GO:0003824 BV404_RS08190 4b0f44bb212e88d1e4b773a022ab455b 511 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 5 506 6.0E-215 T 09-03-2017 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BV404_RS08190 4b0f44bb212e88d1e4b773a022ab455b 511 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 09-03-2017 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 BV404_RS08190 4b0f44bb212e88d1e4b773a022ab455b 511 Gene3D G3DSA:1.20.200.10 198 500 1.6E-126 T 09-03-2017 BV404_RS08190 4b0f44bb212e88d1e4b773a022ab455b 511 Pfam PF00221 Aromatic amino acid lyase 11 470 4.0E-187 T 09-03-2017 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 BV404_RS03355 d51ecec0e14fe9804a78f31a5ec5a7d7 204 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 3 202 26.312 T 09-03-2017 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 BV404_RS03355 d51ecec0e14fe9804a78f31a5ec5a7d7 204 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 28 201 1.5E-36 T 09-03-2017 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 BV404_RS03355 d51ecec0e14fe9804a78f31a5ec5a7d7 204 Gene3D G3DSA:2.50.20.10 13 202 7.6E-61 T 09-03-2017 BV404_RS03355 d51ecec0e14fe9804a78f31a5ec5a7d7 204 Pfam PF03550 Outer membrane lipoprotein LolB 44 200 8.7E-45 T 09-03-2017 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 BV404_RS03355 d51ecec0e14fe9804a78f31a5ec5a7d7 204 SUPERFAMILY SSF89392 19 202 1.33E-48 T 09-03-2017 IPR029046 Lipoprotein localisation LolA/LolB/LppX BV404_RS11790 f0343675cfdac269757baa66f3b3e50e 353 SUPERFAMILY SSF50156 239 346 3.94E-21 T 09-03-2017 IPR001478 PDZ domain GO:0005515 BV404_RS11790 f0343675cfdac269757baa66f3b3e50e 353 Pfam PF13180 PDZ domain 257 346 1.5E-15 T 09-03-2017 IPR001478 PDZ domain GO:0005515 BV404_RS11790 f0343675cfdac269757baa66f3b3e50e 353 SMART SM00228 256 338 2.6E-7 T 09-03-2017 IPR001478 PDZ domain GO:0005515 BV404_RS11790 f0343675cfdac269757baa66f3b3e50e 353 Gene3D G3DSA:2.40.10.10 148 257 1.1E-38 T 09-03-2017 BV404_RS11790 f0343675cfdac269757baa66f3b3e50e 353 Pfam PF13365 Trypsin-like peptidase domain 81 215 1.3E-31 T 09-03-2017 BV404_RS11790 f0343675cfdac269757baa66f3b3e50e 353 SUPERFAMILY SSF50494 42 265 7.09E-62 T 09-03-2017 IPR009003 Peptidase S1, PA clan BV404_RS11790 f0343675cfdac269757baa66f3b3e50e 353 PRINTS PR00834 HtrA/DegQ protease family signature 186 203 2.5E-46 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BV404_RS11790 f0343675cfdac269757baa66f3b3e50e 353 PRINTS PR00834 HtrA/DegQ protease family signature 90 102 2.5E-46 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BV404_RS11790 f0343675cfdac269757baa66f3b3e50e 353 PRINTS PR00834 HtrA/DegQ protease family signature 296 308 2.5E-46 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BV404_RS11790 f0343675cfdac269757baa66f3b3e50e 353 PRINTS PR00834 HtrA/DegQ protease family signature 151 175 2.5E-46 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BV404_RS11790 f0343675cfdac269757baa66f3b3e50e 353 PRINTS PR00834 HtrA/DegQ protease family signature 111 131 2.5E-46 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BV404_RS11790 f0343675cfdac269757baa66f3b3e50e 353 PRINTS PR00834 HtrA/DegQ protease family signature 208 225 2.5E-46 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BV404_RS11790 f0343675cfdac269757baa66f3b3e50e 353 Gene3D G3DSA:2.30.42.10 258 350 4.2E-23 T 09-03-2017 IPR001478 PDZ domain GO:0005515 BV404_RS11790 f0343675cfdac269757baa66f3b3e50e 353 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 2 351 1.3E-174 T 09-03-2017 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 BV404_RS11790 f0343675cfdac269757baa66f3b3e50e 353 Gene3D G3DSA:2.40.10.10 36 140 1.5E-33 T 09-03-2017 BV404_RS12950 f1efed4251c111d329ed2ea3bb90a6be 572 SMART SM00646 229 388 7.5E-69 T 09-03-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 BV404_RS12950 f1efed4251c111d329ed2ea3bb90a6be 572 Gene3D G3DSA:3.10.350.10 527 571 6.6E-15 T 09-03-2017 IPR018392 LysM domain BV404_RS12950 f1efed4251c111d329ed2ea3bb90a6be 572 SMART SM00257 527 570 2.2E-13 T 09-03-2017 IPR018392 LysM domain BV404_RS12950 f1efed4251c111d329ed2ea3bb90a6be 572 SMART SM00257 409 452 2.0E-15 T 09-03-2017 IPR018392 LysM domain BV404_RS12950 f1efed4251c111d329ed2ea3bb90a6be 572 SMART SM00257 474 517 2.0E-13 T 09-03-2017 IPR018392 LysM domain BV404_RS12950 f1efed4251c111d329ed2ea3bb90a6be 572 SUPERFAMILY SSF53187 315 391 1.41E-52 T 09-03-2017 BV404_RS12950 f1efed4251c111d329ed2ea3bb90a6be 572 SUPERFAMILY SSF53187 167 263 1.41E-52 T 09-03-2017 BV404_RS12950 f1efed4251c111d329ed2ea3bb90a6be 572 Gene3D G3DSA:3.40.630.40 167 264 1.5E-57 T 09-03-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 BV404_RS12950 f1efed4251c111d329ed2ea3bb90a6be 572 Gene3D G3DSA:3.40.630.40 316 392 1.5E-57 T 09-03-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 BV404_RS12950 f1efed4251c111d329ed2ea3bb90a6be 572 SUPERFAMILY SSF54106 473 517 4.19E-10 T 09-03-2017 IPR018392 LysM domain BV404_RS12950 f1efed4251c111d329ed2ea3bb90a6be 572 SUPERFAMILY SSF54106 527 570 2.22E-9 T 09-03-2017 IPR018392 LysM domain BV404_RS12950 f1efed4251c111d329ed2ea3bb90a6be 572 Gene3D G3DSA:3.10.350.10 407 453 5.4E-17 T 09-03-2017 IPR018392 LysM domain BV404_RS12950 f1efed4251c111d329ed2ea3bb90a6be 572 Gene3D G3DSA:3.10.350.10 472 517 2.5E-16 T 09-03-2017 IPR018392 LysM domain BV404_RS12950 f1efed4251c111d329ed2ea3bb90a6be 572 Pfam PF11741 AMIN domain 33 135 2.1E-18 T 09-03-2017 IPR021731 AMIN domain BV404_RS12950 f1efed4251c111d329ed2ea3bb90a6be 572 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 169 388 1.9E-49 T 09-03-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 BV404_RS12950 f1efed4251c111d329ed2ea3bb90a6be 572 Pfam PF01476 LysM domain 528 570 3.9E-12 T 09-03-2017 IPR018392 LysM domain BV404_RS12950 f1efed4251c111d329ed2ea3bb90a6be 572 Pfam PF01476 LysM domain 410 452 3.5E-13 T 09-03-2017 IPR018392 LysM domain BV404_RS12950 f1efed4251c111d329ed2ea3bb90a6be 572 Pfam PF01476 LysM domain 475 516 4.5E-12 T 09-03-2017 IPR018392 LysM domain BV404_RS12950 f1efed4251c111d329ed2ea3bb90a6be 572 SUPERFAMILY SSF54106 409 452 5.36E-11 T 09-03-2017 IPR018392 LysM domain BV404_RS11235 14eefec27c63ea2af0bb2b8ebec93129 313 Gene3D G3DSA:1.20.58.340 145 226 8.6E-5 T 09-03-2017 BV404_RS11235 14eefec27c63ea2af0bb2b8ebec93129 313 SUPERFAMILY SSF143865 3 231 7.98E-29 T 09-03-2017 BV404_RS11235 14eefec27c63ea2af0bb2b8ebec93129 313 SUPERFAMILY SSF144083 244 306 1.57E-13 T 09-03-2017 BV404_RS11235 14eefec27c63ea2af0bb2b8ebec93129 313 Pfam PF01544 CorA-like Mg2+ transporter protein 30 305 6.6E-49 T 09-03-2017 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 BV404_RS11235 14eefec27c63ea2af0bb2b8ebec93129 313 Gene3D G3DSA:1.20.58.340 241 308 4.3E-17 T 09-03-2017 BV404_RS09345 58cfd8a63afdc1c2222f6e7c51aaa755 439 Pfam PF07690 Major Facilitator Superfamily 32 391 6.7E-50 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BV404_RS09345 58cfd8a63afdc1c2222f6e7c51aaa755 439 PIRSF PIRSF002808 4 437 6.8E-127 T 09-03-2017 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 BV404_RS09345 58cfd8a63afdc1c2222f6e7c51aaa755 439 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 32 408 6.5E-126 T 09-03-2017 BV404_RS09345 58cfd8a63afdc1c2222f6e7c51aaa755 439 Gene3D G3DSA:1.20.1250.20 238 429 4.0E-39 T 09-03-2017 BV404_RS09345 58cfd8a63afdc1c2222f6e7c51aaa755 439 Gene3D G3DSA:1.20.1250.20 17 216 3.9E-49 T 09-03-2017 BV404_RS09345 58cfd8a63afdc1c2222f6e7c51aaa755 439 SUPERFAMILY SSF103473 16 431 1.57E-78 T 09-03-2017 IPR020846 Major facilitator superfamily domain BV404_RS12850 e06ef65dca3be8157bfd73ceb2b3b773 158 PRINTS PR00601 Bacterioferritin signature 23 43 2.5E-72 T 09-03-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BV404_RS12850 e06ef65dca3be8157bfd73ceb2b3b773 158 PRINTS PR00601 Bacterioferritin signature 44 64 2.5E-72 T 09-03-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BV404_RS12850 e06ef65dca3be8157bfd73ceb2b3b773 158 PRINTS PR00601 Bacterioferritin signature 3 22 2.5E-72 T 09-03-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BV404_RS12850 e06ef65dca3be8157bfd73ceb2b3b773 158 PRINTS PR00601 Bacterioferritin signature 107 127 2.5E-72 T 09-03-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BV404_RS12850 e06ef65dca3be8157bfd73ceb2b3b773 158 PRINTS PR00601 Bacterioferritin signature 128 149 2.5E-72 T 09-03-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BV404_RS12850 e06ef65dca3be8157bfd73ceb2b3b773 158 PRINTS PR00601 Bacterioferritin signature 86 106 2.5E-72 T 09-03-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BV404_RS12850 e06ef65dca3be8157bfd73ceb2b3b773 158 PRINTS PR00601 Bacterioferritin signature 65 85 2.5E-72 T 09-03-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BV404_RS12850 e06ef65dca3be8157bfd73ceb2b3b773 158 Gene3D G3DSA:1.20.1260.10 1 156 8.2E-67 T 09-03-2017 IPR012347 Ferritin-related BV404_RS12850 e06ef65dca3be8157bfd73ceb2b3b773 158 Pfam PF00210 Ferritin-like domain 8 143 6.3E-41 T 09-03-2017 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 BV404_RS12850 e06ef65dca3be8157bfd73ceb2b3b773 158 SUPERFAMILY SSF47240 1 154 2.71E-56 T 09-03-2017 IPR009078 Ferritin-like superfamily BV404_RS12850 e06ef65dca3be8157bfd73ceb2b3b773 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 09-03-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BV404_RS12850 e06ef65dca3be8157bfd73ceb2b3b773 158 PIRSF PIRSF002560 1 157 9.5E-73 T 09-03-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BV404_RS12850 e06ef65dca3be8157bfd73ceb2b3b773 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 157 1.3E-82 T 09-03-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BV404_RS10085 cbcc963e67740056c2149befadc26ac9 505 Pfam PF00795 Carbon-nitrogen hydrolase 221 470 2.6E-38 T 09-03-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 BV404_RS10085 cbcc963e67740056c2149befadc26ac9 505 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 8 490 23.526 T 09-03-2017 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 BV404_RS10085 cbcc963e67740056c2149befadc26ac9 505 Gene3D G3DSA:3.60.110.10 213 481 1.0E-23 T 09-03-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 BV404_RS10085 cbcc963e67740056c2149befadc26ac9 505 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 61 452 8.1E-98 T 09-03-2017 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 BV404_RS10085 cbcc963e67740056c2149befadc26ac9 505 SUPERFAMILY SSF56317 213 487 1.19E-42 T 09-03-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 BV404_RS08305 8c6cf60a152ab3b446f0fc5c0231007c 782 SUPERFAMILY SSF52540 19 325 2.61E-46 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS08305 8c6cf60a152ab3b446f0fc5c0231007c 782 Gene3D G3DSA:3.40.50.300 196 326 4.4E-14 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS08305 8c6cf60a152ab3b446f0fc5c0231007c 782 Pfam PF00270 DEAD/DEAH box helicase 11 149 4.0E-9 T 09-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BV404_RS08305 8c6cf60a152ab3b446f0fc5c0231007c 782 SMART SM00847 372 461 0.0092 T 09-03-2017 IPR007502 Helicase-associated domain GO:0004386 BV404_RS08305 8c6cf60a152ab3b446f0fc5c0231007c 782 Pfam PF00271 Helicase conserved C-terminal domain 201 314 2.8E-12 T 09-03-2017 IPR001650 Helicase, C-terminal BV404_RS08305 8c6cf60a152ab3b446f0fc5c0231007c 782 Pfam PF04408 Helicase associated domain (HA2) 373 431 1.2E-6 T 09-03-2017 IPR007502 Helicase-associated domain GO:0004386 BV404_RS08305 8c6cf60a152ab3b446f0fc5c0231007c 782 SMART SM00487 1 176 3.7E-15 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain BV404_RS08305 8c6cf60a152ab3b446f0fc5c0231007c 782 SMART SM00490 219 315 8.0E-13 T 09-03-2017 IPR001650 Helicase, C-terminal BV404_RS08305 8c6cf60a152ab3b446f0fc5c0231007c 782 Gene3D G3DSA:3.40.50.300 4 150 8.3E-39 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS22580 4cb440c009cdfdea66760bddd7252b8d 158 Pfam PF13241 Putative NAD(P)-binding 9 119 5.1E-30 T 09-03-2017 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 BV404_RS22580 4cb440c009cdfdea66760bddd7252b8d 158 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 7 156 4.1E-49 T 09-03-2017 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 BV404_RS22580 4cb440c009cdfdea66760bddd7252b8d 158 SUPERFAMILY SSF51735 4 116 1.97E-27 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS22580 4cb440c009cdfdea66760bddd7252b8d 158 Gene3D G3DSA:3.40.50.720 4 116 7.0E-40 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS22580 4cb440c009cdfdea66760bddd7252b8d 158 Gene3D G3DSA:3.30.160.110 117 152 2.3E-16 T 09-03-2017 BV404_RS22580 4cb440c009cdfdea66760bddd7252b8d 158 SUPERFAMILY SSF75615 112 156 6.67E-13 T 09-03-2017 BV404_RS14505 5cd5559617c596a39b16a45eb2c056b9 570 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 297 507 4.3E-35 T 09-03-2017 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 BV404_RS14505 5cd5559617c596a39b16a45eb2c056b9 570 Hamap MF_00520 Ribulokinase [araB]. 8 564 45.175 T 09-03-2017 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16 BV404_RS14505 5cd5559617c596a39b16a45eb2c056b9 570 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 11 287 1.0E-16 T 09-03-2017 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 BV404_RS14505 5cd5559617c596a39b16a45eb2c056b9 570 Gene3D G3DSA:3.30.420.40 293 555 8.8E-46 T 09-03-2017 BV404_RS14505 5cd5559617c596a39b16a45eb2c056b9 570 SUPERFAMILY SSF53067 293 554 3.02E-46 T 09-03-2017 BV404_RS14505 5cd5559617c596a39b16a45eb2c056b9 570 TIGRFAM TIGR01234 L-ribulokinase: ribulokinase 10 554 1.2E-191 T 09-03-2017 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16 BV404_RS14505 5cd5559617c596a39b16a45eb2c056b9 570 SUPERFAMILY SSF53067 10 290 2.22E-28 T 09-03-2017 BV404_RS14505 5cd5559617c596a39b16a45eb2c056b9 570 Gene3D G3DSA:3.30.420.40 9 288 7.9E-37 T 09-03-2017 BV404_RS14505 5cd5559617c596a39b16a45eb2c056b9 570 PIRSF PIRSF000538 9 561 1.7E-47 T 09-03-2017 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 BV404_RS06150 a42322a70d4eabdbcb723a7f8da73aea 352 Pfam PF00990 Diguanylate cyclase, GGDEF domain 183 339 6.6E-39 T 09-03-2017 IPR000160 GGDEF domain BV404_RS06150 a42322a70d4eabdbcb723a7f8da73aea 352 Gene3D G3DSA:3.30.450.40 25 182 1.6E-21 T 09-03-2017 IPR029016 GAF domain-like BV404_RS06150 a42322a70d4eabdbcb723a7f8da73aea 352 Pfam PF01590 GAF domain 36 169 1.7E-12 T 09-03-2017 IPR003018 GAF domain GO:0005515 BV404_RS06150 a42322a70d4eabdbcb723a7f8da73aea 352 SMART SM00065 36 180 3.8E-10 T 09-03-2017 IPR003018 GAF domain GO:0005515 BV404_RS06150 a42322a70d4eabdbcb723a7f8da73aea 352 SMART SM00267 172 344 4.1E-38 T 09-03-2017 IPR000160 GGDEF domain BV404_RS06150 a42322a70d4eabdbcb723a7f8da73aea 352 SUPERFAMILY SSF55781 21 171 1.77E-22 T 09-03-2017 IPR029016 GAF domain-like BV404_RS06150 a42322a70d4eabdbcb723a7f8da73aea 352 SUPERFAMILY SSF55073 188 341 2.82E-44 T 09-03-2017 IPR029787 Nucleotide cyclase BV404_RS06150 a42322a70d4eabdbcb723a7f8da73aea 352 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 179 342 1.1E-42 T 09-03-2017 IPR000160 GGDEF domain BV404_RS06150 a42322a70d4eabdbcb723a7f8da73aea 352 Gene3D G3DSA:3.30.70.270 185 343 4.1E-48 T 09-03-2017 BV404_RS07870 75dfdb0420c8ae59a05469d02a99615c 313 Gene3D G3DSA:3.40.50.880 34 301 1.6E-120 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like BV404_RS07870 75dfdb0420c8ae59a05469d02a99615c 313 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 2.0E-129 T 09-03-2017 BV404_RS07870 75dfdb0420c8ae59a05469d02a99615c 313 PIRSF PIRSF000450 1 309 3.8E-147 T 09-03-2017 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 BV404_RS07870 75dfdb0420c8ae59a05469d02a99615c 313 Pfam PF04204 Homoserine O-succinyltransferase 2 299 4.6E-134 T 09-03-2017 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 BV404_RS07870 75dfdb0420c8ae59a05469d02a99615c 313 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 302 5.4E-162 T 09-03-2017 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 BV404_RS07870 75dfdb0420c8ae59a05469d02a99615c 313 SUPERFAMILY SSF52317 17 297 1.29E-101 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like BV404_RS07870 75dfdb0420c8ae59a05469d02a99615c 313 Hamap MF_00295 Homoserine O-succinyltransferase [metA]. 1 301 52.943 T 09-03-2017 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 BV404_RS02005 7d508625453c6b5f601afe9b98146ccb 293 Gene3D G3DSA:3.40.50.620 1 176 3.4E-80 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS02005 7d508625453c6b5f601afe9b98146ccb 293 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 40.309 T 09-03-2017 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 BV404_RS02005 7d508625453c6b5f601afe9b98146ccb 293 SUPERFAMILY SSF52374 1 281 4.29E-109 T 09-03-2017 BV404_RS02005 7d508625453c6b5f601afe9b98146ccb 293 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 281 8.1E-107 T 09-03-2017 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 BV404_RS02005 7d508625453c6b5f601afe9b98146ccb 293 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 23 62 1.4E-9 T 09-03-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BV404_RS02005 7d508625453c6b5f601afe9b98146ccb 293 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 1.5E-102 T 09-03-2017 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 BV404_RS02005 7d508625453c6b5f601afe9b98146ccb 293 Gene3D G3DSA:3.30.1300.10 177 286 4.0E-27 T 09-03-2017 BV404_RS10510 0954c5e3bafa8d34bbde69ae2202a815 258 Pfam PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) 1 256 3.4E-113 T 09-03-2017 IPR016908 Uncharacterised conserved protein UCP029037 BV404_RS10510 0954c5e3bafa8d34bbde69ae2202a815 258 PIRSF PIRSF029037 1 258 2.6E-114 T 09-03-2017 IPR016908 Uncharacterised conserved protein UCP029037 BV404_RS04305 b6523f212aef7fbb03ec5883ee9766ec 476 Gene3D G3DSA:3.30.1360.60 397 472 2.5E-27 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 BV404_RS04305 b6523f212aef7fbb03ec5883ee9766ec 476 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 376 458 1.7E-21 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 BV404_RS04305 b6523f212aef7fbb03ec5883ee9766ec 476 SUPERFAMILY SSF55604 399 472 7.06E-21 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 BV404_RS04305 b6523f212aef7fbb03ec5883ee9766ec 476 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 473 3.1E-200 T 09-03-2017 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0015758|GO:0016021 BV404_RS04305 b6523f212aef7fbb03ec5883ee9766ec 476 Pfam PF00367 phosphotransferase system, EIIB 402 434 2.8E-13 T 09-03-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BV404_RS04305 b6523f212aef7fbb03ec5883ee9766ec 476 Pfam PF02378 Phosphotransferase system, EIIC 13 318 2.0E-74 T 09-03-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BV404_RS04305 b6523f212aef7fbb03ec5883ee9766ec 476 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 412 429 - T 09-03-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BV404_RS06690 42360cdb5fe9b7c0272351bea4eda7f3 502 Gene3D G3DSA:3.40.50.300 7 232 3.9E-58 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS06690 42360cdb5fe9b7c0272351bea4eda7f3 502 Gene3D G3DSA:3.40.50.300 258 494 4.6E-44 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS06690 42360cdb5fe9b7c0272351bea4eda7f3 502 ProSitePatterns PS00211 ABC transporters family signature. 403 417 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS06690 42360cdb5fe9b7c0272351bea4eda7f3 502 SUPERFAMILY SSF52540 245 491 1.65E-40 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS06690 42360cdb5fe9b7c0272351bea4eda7f3 502 SUPERFAMILY SSF52540 8 230 2.33E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS06690 42360cdb5fe9b7c0272351bea4eda7f3 502 SMART SM00382 34 221 6.4E-8 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS06690 42360cdb5fe9b7c0272351bea4eda7f3 502 SMART SM00382 284 479 2.6 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS06690 42360cdb5fe9b7c0272351bea4eda7f3 502 Pfam PF00005 ABC transporter 25 174 3.3E-27 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS06690 42360cdb5fe9b7c0272351bea4eda7f3 502 Pfam PF00005 ABC transporter 276 430 1.6E-18 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS14160 4e0ee160d818d1e2f31ebfea0738287c 118 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 6 113 3.8E-27 T 09-03-2017 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 BV404_RS14160 4e0ee160d818d1e2f31ebfea0738287c 118 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 56 70 - T 09-03-2017 IPR020539 Ribonuclease P, conserved site GO:0004526 BV404_RS14160 4e0ee160d818d1e2f31ebfea0738287c 118 Gene3D G3DSA:3.30.230.10 4 113 1.1E-32 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BV404_RS14160 4e0ee160d818d1e2f31ebfea0738287c 118 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 16 104 1.0E-41 T 09-03-2017 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 BV404_RS14160 4e0ee160d818d1e2f31ebfea0738287c 118 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 115 17.036 T 09-03-2017 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 BV404_RS14160 4e0ee160d818d1e2f31ebfea0738287c 118 Pfam PF00825 Ribonuclease P 6 112 2.0E-32 T 09-03-2017 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 BV404_RS14160 4e0ee160d818d1e2f31ebfea0738287c 118 SUPERFAMILY SSF54211 4 114 8.09E-30 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold BV404_RS12280 e4e790582c2803487873ed2e59464b6d 368 SUPERFAMILY SSF52540 5 334 7.54E-67 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS12280 e4e790582c2803487873ed2e59464b6d 368 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 1.1E-126 T 09-03-2017 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 BV404_RS12280 e4e790582c2803487873ed2e59464b6d 368 Gene3D G3DSA:3.40.50.300 100 342 2.7E-62 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS12280 e4e790582c2803487873ed2e59464b6d 368 Pfam PF00437 Type II/IV secretion system protein 113 251 1.0E-36 T 09-03-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 BV404_RS17465 8b66c87953ffe87621dd89877a9d0b26 78 Pfam PF12848 ABC transporter 29 78 1.3E-11 T 09-03-2017 IPR032781 ABC-transporter extension domain BV404_RS17465 8b66c87953ffe87621dd89877a9d0b26 78 SUPERFAMILY SSF52540 2 76 1.12E-5 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS17465 8b66c87953ffe87621dd89877a9d0b26 78 Gene3D G3DSA:3.40.50.300 8 76 2.3E-7 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS05685 fdb0dbb34947c4a96c11d001b1bd489e 257 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 44.282 T 09-03-2017 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 BV404_RS05685 fdb0dbb34947c4a96c11d001b1bd489e 257 SUPERFAMILY SSF51366 1 256 4.24E-74 T 09-03-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 BV404_RS05685 fdb0dbb34947c4a96c11d001b1bd489e 257 Gene3D G3DSA:3.20.20.70 4 257 1.4E-88 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS05685 fdb0dbb34947c4a96c11d001b1bd489e 257 Pfam PF00977 Histidine biosynthesis protein 5 239 8.4E-78 T 09-03-2017 IPR006062 Histidine biosynthesis GO:0000105 BV404_RS05685 fdb0dbb34947c4a96c11d001b1bd489e 257 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 1.0E-112 T 09-03-2017 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 BV404_RS14865 25c0bc519a545101c87d11699ee350c8 466 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 2 466 64.48 T 09-03-2017 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 BV404_RS14865 25c0bc519a545101c87d11699ee350c8 466 Gene3D G3DSA:3.50.50.60 149 335 3.3E-49 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS14865 25c0bc519a545101c87d11699ee350c8 466 SUPERFAMILY SSF55424 345 463 1.89E-30 T 09-03-2017 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 BV404_RS14865 25c0bc519a545101c87d11699ee350c8 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 8.0E-52 T 09-03-2017 BV404_RS14865 25c0bc519a545101c87d11699ee350c8 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 8.0E-52 T 09-03-2017 BV404_RS14865 25c0bc519a545101c87d11699ee350c8 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 8.0E-52 T 09-03-2017 BV404_RS14865 25c0bc519a545101c87d11699ee350c8 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 8.0E-52 T 09-03-2017 BV404_RS14865 25c0bc519a545101c87d11699ee350c8 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 8.0E-52 T 09-03-2017 BV404_RS14865 25c0bc519a545101c87d11699ee350c8 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 8.0E-52 T 09-03-2017 BV404_RS14865 25c0bc519a545101c87d11699ee350c8 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 8.0E-52 T 09-03-2017 BV404_RS14865 25c0bc519a545101c87d11699ee350c8 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 8.0E-52 T 09-03-2017 BV404_RS14865 25c0bc519a545101c87d11699ee350c8 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 8.0E-52 T 09-03-2017 BV404_RS14865 25c0bc519a545101c87d11699ee350c8 466 Gene3D G3DSA:3.30.390.30 345 460 3.7E-33 T 09-03-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 BV404_RS14865 25c0bc519a545101c87d11699ee350c8 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 457 7.5E-30 T 09-03-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 BV404_RS14865 25c0bc519a545101c87d11699ee350c8 466 SUPERFAMILY SSF51905 4 319 5.79E-57 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS14865 25c0bc519a545101c87d11699ee350c8 466 Gene3D G3DSA:3.50.50.60 6 148 2.6E-31 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS14865 25c0bc519a545101c87d11699ee350c8 466 PIRSF PIRSF000350 1 463 5.1E-70 T 09-03-2017 BV404_RS14865 25c0bc519a545101c87d11699ee350c8 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 326 3.4E-60 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS14865 25c0bc519a545101c87d11699ee350c8 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 2.9E-28 T 09-03-2017 BV404_RS14865 25c0bc519a545101c87d11699ee350c8 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.9E-28 T 09-03-2017 BV404_RS14865 25c0bc519a545101c87d11699ee350c8 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 2.9E-28 T 09-03-2017 BV404_RS14865 25c0bc519a545101c87d11699ee350c8 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 2.9E-28 T 09-03-2017 BV404_RS14865 25c0bc519a545101c87d11699ee350c8 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 2.9E-28 T 09-03-2017 BV404_RS00030 25c0bc519a545101c87d11699ee350c8 466 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 2 466 64.48 T 09-03-2017 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 BV404_RS00030 25c0bc519a545101c87d11699ee350c8 466 Gene3D G3DSA:3.50.50.60 149 335 3.3E-49 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS00030 25c0bc519a545101c87d11699ee350c8 466 SUPERFAMILY SSF55424 345 463 1.89E-30 T 09-03-2017 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 BV404_RS00030 25c0bc519a545101c87d11699ee350c8 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 8.0E-52 T 09-03-2017 BV404_RS00030 25c0bc519a545101c87d11699ee350c8 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 8.0E-52 T 09-03-2017 BV404_RS00030 25c0bc519a545101c87d11699ee350c8 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 8.0E-52 T 09-03-2017 BV404_RS00030 25c0bc519a545101c87d11699ee350c8 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 8.0E-52 T 09-03-2017 BV404_RS00030 25c0bc519a545101c87d11699ee350c8 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 8.0E-52 T 09-03-2017 BV404_RS00030 25c0bc519a545101c87d11699ee350c8 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 8.0E-52 T 09-03-2017 BV404_RS00030 25c0bc519a545101c87d11699ee350c8 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 8.0E-52 T 09-03-2017 BV404_RS00030 25c0bc519a545101c87d11699ee350c8 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 8.0E-52 T 09-03-2017 BV404_RS00030 25c0bc519a545101c87d11699ee350c8 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 8.0E-52 T 09-03-2017 BV404_RS00030 25c0bc519a545101c87d11699ee350c8 466 Gene3D G3DSA:3.30.390.30 345 460 3.7E-33 T 09-03-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 BV404_RS00030 25c0bc519a545101c87d11699ee350c8 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 457 7.5E-30 T 09-03-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 BV404_RS00030 25c0bc519a545101c87d11699ee350c8 466 SUPERFAMILY SSF51905 4 319 5.79E-57 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS00030 25c0bc519a545101c87d11699ee350c8 466 Gene3D G3DSA:3.50.50.60 6 148 2.6E-31 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS00030 25c0bc519a545101c87d11699ee350c8 466 PIRSF PIRSF000350 1 463 5.1E-70 T 09-03-2017 BV404_RS00030 25c0bc519a545101c87d11699ee350c8 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 326 3.4E-60 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS00030 25c0bc519a545101c87d11699ee350c8 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 2.9E-28 T 09-03-2017 BV404_RS00030 25c0bc519a545101c87d11699ee350c8 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.9E-28 T 09-03-2017 BV404_RS00030 25c0bc519a545101c87d11699ee350c8 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 2.9E-28 T 09-03-2017 BV404_RS00030 25c0bc519a545101c87d11699ee350c8 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 2.9E-28 T 09-03-2017 BV404_RS00030 25c0bc519a545101c87d11699ee350c8 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 2.9E-28 T 09-03-2017 BV404_RS01910 619b98596519dc675363f4d5e9f6b67b 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 224 239 1.1E-29 T 09-03-2017 IPR014032 Peptidase A24A, prepilin type IV, bacterial BV404_RS01910 619b98596519dc675363f4d5e9f6b67b 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 143 160 1.1E-29 T 09-03-2017 IPR014032 Peptidase A24A, prepilin type IV, bacterial BV404_RS01910 619b98596519dc675363f4d5e9f6b67b 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 201 211 1.1E-29 T 09-03-2017 IPR014032 Peptidase A24A, prepilin type IV, bacterial BV404_RS01910 619b98596519dc675363f4d5e9f6b67b 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 212 223 1.1E-29 T 09-03-2017 IPR014032 Peptidase A24A, prepilin type IV, bacterial BV404_RS01910 619b98596519dc675363f4d5e9f6b67b 289 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 17 124 8.8E-33 T 09-03-2017 IPR010627 Peptidase A24A, N-terminal BV404_RS01910 619b98596519dc675363f4d5e9f6b67b 289 Pfam PF01478 Type IV leader peptidase family 135 244 2.2E-27 T 09-03-2017 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 BV404_RS01060 1c374090fd0fe0a71f780c050d9e8fb6 330 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 317 4.8E-112 T 09-03-2017 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BV404_RS01060 1c374090fd0fe0a71f780c050d9e8fb6 330 SMART SM00662 23 235 5.5E-104 T 09-03-2017 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BV404_RS01060 1c374090fd0fe0a71f780c050d9e8fb6 330 Gene3D G3DSA:3.30.1360.10 9 57 3.0E-10 T 09-03-2017 BV404_RS01060 1c374090fd0fe0a71f780c050d9e8fb6 330 Gene3D G3DSA:1.10.150.20 245 329 7.2E-38 T 09-03-2017 BV404_RS01060 1c374090fd0fe0a71f780c050d9e8fb6 330 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 246 309 5.6E-24 T 09-03-2017 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BV404_RS01060 1c374090fd0fe0a71f780c050d9e8fb6 330 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 229 2.5E-23 T 09-03-2017 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BV404_RS01060 1c374090fd0fe0a71f780c050d9e8fb6 330 Gene3D G3DSA:2.170.120.12 58 178 1.7E-41 T 09-03-2017 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BV404_RS01060 1c374090fd0fe0a71f780c050d9e8fb6 330 SUPERFAMILY SSF56553 53 179 4.19E-41 T 09-03-2017 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BV404_RS01060 1c374090fd0fe0a71f780c050d9e8fb6 330 SUPERFAMILY SSF55257 7 53 9.81E-30 T 09-03-2017 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BV404_RS01060 1c374090fd0fe0a71f780c050d9e8fb6 330 SUPERFAMILY SSF55257 180 234 9.81E-30 T 09-03-2017 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BV404_RS01060 1c374090fd0fe0a71f780c050d9e8fb6 330 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 257 330 2.0E-36 T 09-03-2017 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BV404_RS01060 1c374090fd0fe0a71f780c050d9e8fb6 330 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 318 34.962 T 09-03-2017 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BV404_RS01060 1c374090fd0fe0a71f780c050d9e8fb6 330 SUPERFAMILY SSF47789 252 326 1.44E-25 T 09-03-2017 BV404_RS01060 1c374090fd0fe0a71f780c050d9e8fb6 330 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 62 157 1.0E-24 T 09-03-2017 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BV404_RS00760 d2db3455fc1e51cace042c0221ca2db3 196 Gene3D G3DSA:1.10.1660.10 44 90 7.0E-4 T 09-03-2017 BV404_RS00760 d2db3455fc1e51cace042c0221ca2db3 196 Pfam PF05137 Fimbrial assembly protein (PilN) 102 176 1.5E-13 T 09-03-2017 IPR007813 Fimbrial assembly PilN BV404_RS00765 a6727c3bdc09c4051ecc87fd5b10185a 196 Gene3D G3DSA:3.30.70.60 92 193 7.8E-31 T 09-03-2017 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 BV404_RS00765 a6727c3bdc09c4051ecc87fd5b10185a 196 Pfam PF04350 Pilus assembly protein, PilO 47 189 7.2E-46 T 09-03-2017 IPR007445 Pilus assembly protein, PilO BV404_RS00765 a6727c3bdc09c4051ecc87fd5b10185a 196 PIRSF PIRSF016482 1 196 7.9E-74 T 09-03-2017 IPR007445 Pilus assembly protein, PilO BV404_RS00825 1e621b2cd666de3cf63b879a8add0c89 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 4.2E-13 T 09-03-2017 BV404_RS00825 1e621b2cd666de3cf63b879a8add0c89 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 4.2E-13 T 09-03-2017 BV404_RS00825 1e621b2cd666de3cf63b879a8add0c89 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 4.2E-13 T 09-03-2017 BV404_RS00825 1e621b2cd666de3cf63b879a8add0c89 192 Gene3D G3DSA:3.40.50.880 2 191 6.0E-67 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like BV404_RS00825 1e621b2cd666de3cf63b879a8add0c89 192 SUPERFAMILY SSF52317 1 191 1.76E-55 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like BV404_RS00825 1e621b2cd666de3cf63b879a8add0c89 192 Pfam PF00117 Glutamine amidotransferase class-I 4 190 2.4E-54 T 09-03-2017 IPR017926 Glutamine amidotransferase BV404_RS00825 1e621b2cd666de3cf63b879a8add0c89 192 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 192 4.6E-87 T 09-03-2017 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BV404_RS00825 1e621b2cd666de3cf63b879a8add0c89 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 3.6E-5 T 09-03-2017 BV404_RS00825 1e621b2cd666de3cf63b879a8add0c89 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 3.6E-5 T 09-03-2017 BV404_RS00825 1e621b2cd666de3cf63b879a8add0c89 192 PRINTS PR00097 Anthranilate synthase component II signature 99 107 4.1E-36 T 09-03-2017 BV404_RS00825 1e621b2cd666de3cf63b879a8add0c89 192 PRINTS PR00097 Anthranilate synthase component II signature 119 131 4.1E-36 T 09-03-2017 BV404_RS00825 1e621b2cd666de3cf63b879a8add0c89 192 PRINTS PR00097 Anthranilate synthase component II signature 2 16 4.1E-36 T 09-03-2017 BV404_RS00825 1e621b2cd666de3cf63b879a8add0c89 192 PRINTS PR00097 Anthranilate synthase component II signature 74 85 4.1E-36 T 09-03-2017 BV404_RS00825 1e621b2cd666de3cf63b879a8add0c89 192 PRINTS PR00097 Anthranilate synthase component II signature 47 56 4.1E-36 T 09-03-2017 BV404_RS00825 1e621b2cd666de3cf63b879a8add0c89 192 PRINTS PR00097 Anthranilate synthase component II signature 169 182 4.1E-36 T 09-03-2017 BV404_RS05415 5aa284295b8e05e44fed4bf9f33e6b41 330 Gene3D G3DSA:3.40.50.300 8 263 3.8E-81 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS05415 5aa284295b8e05e44fed4bf9f33e6b41 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 241 308 6.2E-20 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BV404_RS05415 5aa284295b8e05e44fed4bf9f33e6b41 330 Pfam PF00005 ABC transporter 38 189 3.7E-34 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS05415 5aa284295b8e05e44fed4bf9f33e6b41 330 SUPERFAMILY SSF52540 9 261 1.45E-73 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS05415 5aa284295b8e05e44fed4bf9f33e6b41 330 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS05415 5aa284295b8e05e44fed4bf9f33e6b41 330 SMART SM00382 46 239 1.2E-17 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS05415 5aa284295b8e05e44fed4bf9f33e6b41 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 240 326 2.1E-27 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BV404_RS11240 2d99c115b2e66da2dccfd2e3ee5f0e97 183 SUPERFAMILY SSF110857 1 123 5.76E-20 T 09-03-2017 IPR013024 Butirosin biosynthesis, BtrG-like BV404_RS11240 2d99c115b2e66da2dccfd2e3ee5f0e97 183 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 110 4.8E-12 T 09-03-2017 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like BV404_RS11240 2d99c115b2e66da2dccfd2e3ee5f0e97 183 Gene3D G3DSA:3.10.490.10 1 143 9.1E-13 T 09-03-2017 IPR013024 Butirosin biosynthesis, BtrG-like BV404_RS08490 79408090b1c90b92c74c31679d9f7342 268 SUPERFAMILY SSF51366 1 266 1.51E-91 T 09-03-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 BV404_RS08490 79408090b1c90b92c74c31679d9f7342 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 2.3E-102 T 09-03-2017 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BV404_RS08490 79408090b1c90b92c74c31679d9f7342 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 38.163 T 09-03-2017 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BV404_RS08490 79408090b1c90b92c74c31679d9f7342 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 09-03-2017 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BV404_RS08490 79408090b1c90b92c74c31679d9f7342 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 5.8E-98 T 09-03-2017 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BV404_RS08490 79408090b1c90b92c74c31679d9f7342 268 Gene3D G3DSA:3.20.20.70 1 267 3.7E-97 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS11265 580ecbd2c9d772d7f476c6110ecaddc4 339 Pfam PF14559 Tetratricopeptide repeat 194 250 2.7E-6 T 09-03-2017 BV404_RS11265 580ecbd2c9d772d7f476c6110ecaddc4 339 SUPERFAMILY SSF48452 53 321 5.12E-24 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BV404_RS11265 580ecbd2c9d772d7f476c6110ecaddc4 339 SMART SM00028 118 151 84.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 BV404_RS11265 580ecbd2c9d772d7f476c6110ecaddc4 339 SMART SM00028 213 246 4.7E-4 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 BV404_RS11265 580ecbd2c9d772d7f476c6110ecaddc4 339 SMART SM00028 277 310 1.5E-4 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 BV404_RS11265 580ecbd2c9d772d7f476c6110ecaddc4 339 SMART SM00028 84 117 0.61 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 BV404_RS11265 580ecbd2c9d772d7f476c6110ecaddc4 339 SMART SM00028 179 212 0.77 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 BV404_RS11265 580ecbd2c9d772d7f476c6110ecaddc4 339 Pfam PF13181 Tetratricopeptide repeat 119 148 0.12 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 BV404_RS11265 580ecbd2c9d772d7f476c6110ecaddc4 339 Pfam PF13181 Tetratricopeptide repeat 86 117 0.056 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 BV404_RS11265 580ecbd2c9d772d7f476c6110ecaddc4 339 Pfam PF13181 Tetratricopeptide repeat 278 305 0.022 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 BV404_RS11265 580ecbd2c9d772d7f476c6110ecaddc4 339 Gene3D G3DSA:1.25.40.10 52 316 2.5E-37 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BV404_RS03390 867cde31163d7f81a6a9230b6b390693 553 ProSitePatterns PS00785 5'-nucleotidase signature 1. 38 50 - T 09-03-2017 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-73621|Reactome: R-HSA-74259 BV404_RS03390 867cde31163d7f81a6a9230b6b390693 553 Gene3D G3DSA:3.60.21.10 32 364 1.1E-102 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like BV404_RS03390 867cde31163d7f81a6a9230b6b390693 553 ProSitePatterns PS00786 5'-nucleotidase signature 2. 113 124 - T 09-03-2017 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-73621|Reactome: R-HSA-74259 BV404_RS03390 867cde31163d7f81a6a9230b6b390693 553 Gene3D G3DSA:3.90.780.10 367 541 1.4E-52 T 09-03-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 BV404_RS03390 867cde31163d7f81a6a9230b6b390693 553 SUPERFAMILY SSF56300 31 364 1.4E-100 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like BV404_RS03390 867cde31163d7f81a6a9230b6b390693 553 SUPERFAMILY SSF55816 366 542 2.49E-52 T 09-03-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 BV404_RS03390 867cde31163d7f81a6a9230b6b390693 553 Pfam PF02872 5'-nucleotidase, C-terminal domain 366 511 2.4E-34 T 09-03-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 BV404_RS03390 867cde31163d7f81a6a9230b6b390693 553 Pfam PF00149 Calcineurin-like phosphoesterase 38 259 3.6E-21 T 09-03-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 BV404_RS03390 867cde31163d7f81a6a9230b6b390693 553 PRINTS PR01607 Apyrase family signature 242 265 1.5E-53 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 BV404_RS03390 867cde31163d7f81a6a9230b6b390693 553 PRINTS PR01607 Apyrase family signature 211 228 1.5E-53 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 BV404_RS03390 867cde31163d7f81a6a9230b6b390693 553 PRINTS PR01607 Apyrase family signature 420 443 1.5E-53 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 BV404_RS03390 867cde31163d7f81a6a9230b6b390693 553 PRINTS PR01607 Apyrase family signature 487 506 1.5E-53 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 BV404_RS03390 867cde31163d7f81a6a9230b6b390693 553 PRINTS PR01607 Apyrase family signature 287 307 1.5E-53 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 BV404_RS03390 867cde31163d7f81a6a9230b6b390693 553 PRINTS PR01607 Apyrase family signature 36 54 1.5E-53 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 BV404_RS06700 553e4cd5116c134e16cd042bbbbab570 115 SUPERFAMILY SSF143410 5 115 5.1E-41 T 09-03-2017 IPR023389 DOPA-like domain BV404_RS06700 553e4cd5116c134e16cd042bbbbab570 115 Gene3D G3DSA:3.30.70.1240 4 115 3.7E-38 T 09-03-2017 IPR023389 DOPA-like domain BV404_RS06700 553e4cd5116c134e16cd042bbbbab570 115 PIRSF PIRSF028139 4 115 1.5E-39 T 09-03-2017 IPR014980 Dopa 4,5-dioxygenase BV404_RS06700 553e4cd5116c134e16cd042bbbbab570 115 Pfam PF08883 Dopa 4,5-dioxygenase family 14 113 2.1E-31 T 09-03-2017 IPR014980 Dopa 4,5-dioxygenase BV404_RS00355 507d0bb10f9ec4dda13f5fbe96fbf752 692 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 28 663 1.2E-234 T 09-03-2017 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 BV404_RS00355 507d0bb10f9ec4dda13f5fbe96fbf752 692 Gene3D G3DSA:2.40.50.140 46 140 1.8E-32 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS00355 507d0bb10f9ec4dda13f5fbe96fbf752 692 SUPERFAMILY SSF52540 216 452 5.02E-57 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS00355 507d0bb10f9ec4dda13f5fbe96fbf752 692 Pfam PF00271 Helicase conserved C-terminal domain 480 587 2.2E-18 T 09-03-2017 IPR001650 Helicase, C-terminal BV404_RS00355 507d0bb10f9ec4dda13f5fbe96fbf752 692 SMART SM00490 504 588 4.8E-21 T 09-03-2017 IPR001650 Helicase, C-terminal BV404_RS00355 507d0bb10f9ec4dda13f5fbe96fbf752 692 Gene3D G3DSA:3.40.50.300 453 637 1.9E-42 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS00355 507d0bb10f9ec4dda13f5fbe96fbf752 692 Gene3D G3DSA:1.10.150.20 2 36 4.6E-6 T 09-03-2017 BV404_RS00355 507d0bb10f9ec4dda13f5fbe96fbf752 692 Pfam PF17191 RecG wedge domain 13 170 5.4E-20 T 09-03-2017 IPR033454 RecG, wedge domain BV404_RS00355 507d0bb10f9ec4dda13f5fbe96fbf752 692 SMART SM00487 264 458 1.8E-30 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain BV404_RS00355 507d0bb10f9ec4dda13f5fbe96fbf752 692 Pfam PF00270 DEAD/DEAH box helicase 272 432 9.6E-19 T 09-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BV404_RS00355 507d0bb10f9ec4dda13f5fbe96fbf752 692 SUPERFAMILY SSF52540 507 652 9.7E-44 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS00355 507d0bb10f9ec4dda13f5fbe96fbf752 692 SUPERFAMILY SSF52540 291 341 9.7E-44 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS00355 507d0bb10f9ec4dda13f5fbe96fbf752 692 Gene3D G3DSA:3.40.50.300 253 452 7.8E-57 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS00355 507d0bb10f9ec4dda13f5fbe96fbf752 692 SUPERFAMILY SSF50249 8 173 4.45E-40 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS09710 3ba9e590b9982deadafbd0f941a130f8 676 Pfam PF02151 UvrB/uvrC motif 636 671 3.2E-8 T 09-03-2017 IPR001943 UVR domain GO:0005515 BV404_RS09710 3ba9e590b9982deadafbd0f941a130f8 676 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 669 0.0 T 09-03-2017 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 BV404_RS09710 3ba9e590b9982deadafbd0f941a130f8 676 Gene3D G3DSA:3.40.50.300 5 89 2.6E-52 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09710 3ba9e590b9982deadafbd0f941a130f8 676 Gene3D G3DSA:3.40.50.300 389 408 2.6E-52 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09710 3ba9e590b9982deadafbd0f941a130f8 676 Gene3D G3DSA:3.40.50.300 279 339 2.6E-52 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09710 3ba9e590b9982deadafbd0f941a130f8 676 Pfam PF00271 Helicase conserved C-terminal domain 436 546 4.4E-18 T 09-03-2017 IPR001650 Helicase, C-terminal BV404_RS09710 3ba9e590b9982deadafbd0f941a130f8 676 SUPERFAMILY SSF52540 3 416 1.56E-136 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09710 3ba9e590b9982deadafbd0f941a130f8 676 Pfam PF12344 Ultra-violet resistance protein B 553 594 2.7E-20 T 09-03-2017 IPR024759 UvrB, YAD/RRR-motif-containing domain BV404_RS09710 3ba9e590b9982deadafbd0f941a130f8 676 SUPERFAMILY SSF46600 626 672 4.18E-11 T 09-03-2017 IPR001943 UVR domain GO:0005515 BV404_RS09710 3ba9e590b9982deadafbd0f941a130f8 676 SMART SM00490 461 547 7.0E-19 T 09-03-2017 IPR001650 Helicase, C-terminal BV404_RS09710 3ba9e590b9982deadafbd0f941a130f8 676 SUPERFAMILY SSF52540 460 584 3.52E-35 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09710 3ba9e590b9982deadafbd0f941a130f8 676 SUPERFAMILY SSF52540 37 82 3.52E-35 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09710 3ba9e590b9982deadafbd0f941a130f8 676 Pfam PF04851 Type III restriction enzyme, res subunit 15 92 3.4E-9 T 09-03-2017 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 BV404_RS09710 3ba9e590b9982deadafbd0f941a130f8 676 SMART SM00487 9 427 7.9E-28 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain BV404_RS09710 3ba9e590b9982deadafbd0f941a130f8 676 Gene3D G3DSA:4.10.860.10 618 672 1.1E-17 T 09-03-2017 IPR001943 UVR domain GO:0005515 BV404_RS09710 3ba9e590b9982deadafbd0f941a130f8 676 Gene3D G3DSA:3.40.50.300 423 581 5.4E-39 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09710 3ba9e590b9982deadafbd0f941a130f8 676 Gene3D G3DSA:3.30.2060.10 159 231 8.8E-12 T 09-03-2017 BV404_RS09710 3ba9e590b9982deadafbd0f941a130f8 676 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 671 43.008 T 09-03-2017 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 BV404_RS08860 ce98ba17de5ba2baa20836296dfecb5f 213 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 24 208 4.0E-41 T 09-03-2017 IPR018635 Uncharacterised protein family UPF0319 BV404_RS08860 ce98ba17de5ba2baa20836296dfecb5f 213 Hamap MF_00789 UPF0319 protein YccT [yccT]. 5 211 23.515 T 09-03-2017 IPR018635 Uncharacterised protein family UPF0319 BV404_RS06650 12766f8825121074210e570c43e08e2a 157 Pfam PF00072 Response regulator receiver domain 6 125 7.3E-14 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS06650 12766f8825121074210e570c43e08e2a 157 SMART SM00448 4 125 7.1E-12 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS06650 12766f8825121074210e570c43e08e2a 157 SUPERFAMILY SSF52172 1 132 1.85E-20 T 09-03-2017 IPR011006 CheY-like superfamily BV404_RS06650 12766f8825121074210e570c43e08e2a 157 Gene3D G3DSA:3.40.50.2300 4 133 3.2E-21 T 09-03-2017 BV404_RS09470 91c38770199ed82117c147d3fd9145fb 337 SUPERFAMILY SSF53774 3 336 2.75E-113 T 09-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 BV404_RS09470 91c38770199ed82117c147d3fd9145fb 337 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 09-03-2017 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 BV404_RS09470 91c38770199ed82117c147d3fd9145fb 337 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 09-03-2017 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 BV404_RS09470 91c38770199ed82117c147d3fd9145fb 337 Gene3D G3DSA:3.40.50.1170 4 201 8.8E-81 T 09-03-2017 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 BV404_RS09470 91c38770199ed82117c147d3fd9145fb 337 SMART SM00870 5 324 3.4E-140 T 09-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 BV404_RS09470 91c38770199ed82117c147d3fd9145fb 337 Pfam PF00710 Asparaginase, N-terminal 5 192 3.4E-68 T 09-03-2017 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 BV404_RS09470 91c38770199ed82117c147d3fd9145fb 337 PRINTS PR00139 Asparaginase/glutaminase family signature 261 279 8.4E-17 T 09-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 BV404_RS09470 91c38770199ed82117c147d3fd9145fb 337 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 8.4E-17 T 09-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 BV404_RS09470 91c38770199ed82117c147d3fd9145fb 337 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 8.4E-17 T 09-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 BV404_RS09470 91c38770199ed82117c147d3fd9145fb 337 PIRSF PIRSF001220 1 335 3.0E-95 T 09-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 BV404_RS09470 91c38770199ed82117c147d3fd9145fb 337 PIRSF PIRSF500176 2 333 6.2E-111 T 09-03-2017 BV404_RS09470 91c38770199ed82117c147d3fd9145fb 337 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 4 336 1.4E-116 T 09-03-2017 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 BV404_RS09470 91c38770199ed82117c147d3fd9145fb 337 Gene3D G3DSA:3.40.50.40 212 336 7.5E-48 T 09-03-2017 IPR027473 L-asparaginase, C-terminal domain Reactome: R-HSA-70614 BV404_RS10965 f3d2703d3fd8a16121ef4590e60967f1 173 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 1 173 50.598 T 09-03-2017 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 BV404_RS10965 f3d2703d3fd8a16121ef4590e60967f1 173 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 3.8E-47 T 09-03-2017 IPR000944 Transcription regulator Rrf2-type BV404_RS10965 f3d2703d3fd8a16121ef4590e60967f1 173 SUPERFAMILY SSF46785 2 130 1.68E-35 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS10965 f3d2703d3fd8a16121ef4590e60967f1 173 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 2.0E-65 T 09-03-2017 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 BV404_RS10965 f3d2703d3fd8a16121ef4590e60967f1 173 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 09-03-2017 IPR030489 Transcription regulator Rrf2-type, conserved site BV404_RS10965 f3d2703d3fd8a16121ef4590e60967f1 173 Pfam PF02082 Transcriptional regulator 1 83 5.1E-28 T 09-03-2017 IPR000944 Transcription regulator Rrf2-type BV404_RS10965 f3d2703d3fd8a16121ef4590e60967f1 173 Gene3D G3DSA:1.10.10.10 1 133 7.3E-32 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS04335 0bbc0b752e5dcfdab0de729451ccdbdc 407 Gene3D G3DSA:1.10.10.10 11 80 1.2E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS04335 0bbc0b752e5dcfdab0de729451ccdbdc 407 SUPERFAMILY SSF53067 86 395 6.24E-56 T 09-03-2017 BV404_RS04335 0bbc0b752e5dcfdab0de729451ccdbdc 407 Gene3D G3DSA:3.30.420.40 84 222 2.9E-33 T 09-03-2017 BV404_RS04335 0bbc0b752e5dcfdab0de729451ccdbdc 407 Gene3D G3DSA:3.30.420.40 223 377 1.9E-54 T 09-03-2017 BV404_RS04335 0bbc0b752e5dcfdab0de729451ccdbdc 407 Pfam PF00480 ROK family 88 392 2.2E-69 T 09-03-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BV404_RS04335 0bbc0b752e5dcfdab0de729451ccdbdc 407 SUPERFAMILY SSF46785 10 77 1.58E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS04335 0bbc0b752e5dcfdab0de729451ccdbdc 407 ProSitePatterns PS01125 ROK family signature. 218 245 - T 09-03-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BV404_RS13800 5361cbc3df81fef643dc743124dfa5bd 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 318 8.6E-38 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS13800 5361cbc3df81fef643dc743124dfa5bd 325 SUPERFAMILY SSF161098 90 302 5.89E-15 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS13800 5361cbc3df81fef643dc743124dfa5bd 325 Gene3D G3DSA:1.10.3720.10 88 312 1.3E-15 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS01635 ec1c64f72b85eb091e834d3edbb8a592 604 Gene3D G3DSA:3.40.50.980 8 189 9.4E-32 T 09-03-2017 BV404_RS01635 ec1c64f72b85eb091e834d3edbb8a592 604 SUPERFAMILY SSF56801 7 285 1.96E-111 T 09-03-2017 BV404_RS01635 ec1c64f72b85eb091e834d3edbb8a592 604 SUPERFAMILY SSF56801 336 596 1.96E-111 T 09-03-2017 BV404_RS01635 ec1c64f72b85eb091e834d3edbb8a592 604 Gene3D G3DSA:2.30.38.10 401 460 8.9E-20 T 09-03-2017 BV404_RS01635 ec1c64f72b85eb091e834d3edbb8a592 604 Pfam PF00501 AMP-binding enzyme 13 466 2.5E-99 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 BV404_RS01635 ec1c64f72b85eb091e834d3edbb8a592 604 ProSitePatterns PS00455 Putative AMP-binding domain signature. 183 194 - T 09-03-2017 IPR020845 AMP-binding, conserved site BV404_RS01635 ec1c64f72b85eb091e834d3edbb8a592 604 Gene3D G3DSA:3.40.50.980 333 388 4.1E-31 T 09-03-2017 BV404_RS01635 ec1c64f72b85eb091e834d3edbb8a592 604 Gene3D G3DSA:3.40.50.980 190 280 4.1E-31 T 09-03-2017 BV404_RS02760 6181198c31deccac14551d6ff6ea0948 301 Pfam PF08443 RimK-like ATP-grasp domain 98 286 2.1E-69 T 09-03-2017 IPR013651 ATP-grasp fold, RimK-type BV404_RS02760 6181198c31deccac14551d6ff6ea0948 301 Gene3D G3DSA:3.40.50.20 8 102 6.6E-19 T 09-03-2017 IPR016185 Pre-ATP-grasp domain BV404_RS02760 6181198c31deccac14551d6ff6ea0948 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 53.977 T 09-03-2017 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK BV404_RS02760 6181198c31deccac14551d6ff6ea0948 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 286 2.1E-88 T 09-03-2017 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 BV404_RS02760 6181198c31deccac14551d6ff6ea0948 301 Gene3D G3DSA:3.30.1490.20 103 172 1.6E-7 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 BV404_RS02760 6181198c31deccac14551d6ff6ea0948 301 Gene3D G3DSA:3.30.470.20 173 276 8.7E-37 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 BV404_RS02760 6181198c31deccac14551d6ff6ea0948 301 SUPERFAMILY SSF56059 98 288 7.44E-50 T 09-03-2017 BV404_RS10425 983f999cd78800a34a6b674f5794c0b5 300 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 15 291 2.6E-56 T 09-03-2017 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BV404_RS10425 983f999cd78800a34a6b674f5794c0b5 300 Gene3D G3DSA:3.30.43.10 10 69 3.2E-13 T 09-03-2017 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 BV404_RS10425 983f999cd78800a34a6b674f5794c0b5 300 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 193 291 9.7E-19 T 09-03-2017 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BV404_RS10425 983f999cd78800a34a6b674f5794c0b5 300 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 300 64.199 T 09-03-2017 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BV404_RS10425 983f999cd78800a34a6b674f5794c0b5 300 Gene3D G3DSA:3.30.465.10 76 210 8.1E-35 T 09-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 BV404_RS10425 983f999cd78800a34a6b674f5794c0b5 300 SUPERFAMILY SSF56194 194 292 7.32E-24 T 09-03-2017 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BV404_RS10425 983f999cd78800a34a6b674f5794c0b5 300 SUPERFAMILY SSF56176 2 180 9.81E-31 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 BV404_RS10425 983f999cd78800a34a6b674f5794c0b5 300 Gene3D G3DSA:3.90.78.10 211 293 2.0E-21 T 09-03-2017 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BV404_RS10425 983f999cd78800a34a6b674f5794c0b5 300 Pfam PF01565 FAD binding domain 23 145 2.2E-13 T 09-03-2017 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 BV404_RS06055 a27c004945c8644614f9d741adf8abfb 460 Gene3D G3DSA:1.20.200.10 134 395 2.8E-86 T 09-03-2017 BV404_RS06055 a27c004945c8644614f9d741adf8abfb 460 PRINTS PR00149 Fumarate lyase superfamily signature 175 193 6.2E-31 T 09-03-2017 IPR000362 Fumarate lyase family BV404_RS06055 a27c004945c8644614f9d741adf8abfb 460 PRINTS PR00149 Fumarate lyase superfamily signature 129 147 6.2E-31 T 09-03-2017 IPR000362 Fumarate lyase family BV404_RS06055 a27c004945c8644614f9d741adf8abfb 460 PRINTS PR00149 Fumarate lyase superfamily signature 266 293 6.2E-31 T 09-03-2017 IPR000362 Fumarate lyase family BV404_RS06055 a27c004945c8644614f9d741adf8abfb 460 PRINTS PR00149 Fumarate lyase superfamily signature 312 328 6.2E-31 T 09-03-2017 IPR000362 Fumarate lyase family BV404_RS06055 a27c004945c8644614f9d741adf8abfb 460 Pfam PF00206 Lyase 13 337 6.1E-94 T 09-03-2017 IPR022761 Fumarate lyase, N-terminal BV404_RS06055 a27c004945c8644614f9d741adf8abfb 460 Hamap MF_00743 Fumarate hydratase class II [fumC]. 5 457 76.186 T 09-03-2017 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BV404_RS06055 a27c004945c8644614f9d741adf8abfb 460 Gene3D G3DSA:1.10.275.10 4 133 4.4E-52 T 09-03-2017 IPR024083 Fumarase/histidase, N-terminal BV404_RS06055 a27c004945c8644614f9d741adf8abfb 460 Gene3D G3DSA:1.10.40.30 403 458 5.0E-20 T 09-03-2017 BV404_RS06055 a27c004945c8644614f9d741adf8abfb 460 Pfam PF10415 Fumarase C C-terminus 403 455 8.3E-19 T 09-03-2017 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BV404_RS06055 a27c004945c8644614f9d741adf8abfb 460 SUPERFAMILY SSF48557 5 454 5.03E-138 T 09-03-2017 IPR008948 L-Aspartase-like GO:0003824 BV404_RS06055 a27c004945c8644614f9d741adf8abfb 460 ProSitePatterns PS00163 Fumarate lyases signature. 312 321 - T 09-03-2017 IPR020557 Fumarate lyase, conserved site GO:0003824 BV404_RS06055 a27c004945c8644614f9d741adf8abfb 460 PRINTS PR00145 Argininosuccinate lyase family signature 170 190 1.6E-6 T 09-03-2017 BV404_RS06055 a27c004945c8644614f9d741adf8abfb 460 PRINTS PR00145 Argininosuccinate lyase family signature 128 150 1.6E-6 T 09-03-2017 BV404_RS06055 a27c004945c8644614f9d741adf8abfb 460 PRINTS PR00145 Argininosuccinate lyase family signature 312 328 1.6E-6 T 09-03-2017 BV404_RS11840 649b378668aea203ccee67413a1bbace 521 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 10 515 2.6E-212 T 09-03-2017 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 BV404_RS11840 649b378668aea203ccee67413a1bbace 521 Pfam PF04262 Glutamate-cysteine ligase 13 378 3.0E-168 T 09-03-2017 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 BV404_RS11840 649b378668aea203ccee67413a1bbace 521 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 521 222.841 T 09-03-2017 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 BV404_RS11840 649b378668aea203ccee67413a1bbace 521 SUPERFAMILY SSF55931 7 513 2.03E-202 T 09-03-2017 BV404_RS14385 aadfcc4ba22221adb6b5c2ca22fb4805 394 TIGRFAM TIGR03415 ABC_choXWV_ATP: choline ABC transporter, ATP-binding protein 4 387 9.9E-183 T 09-03-2017 IPR022473 ABC transporter, Choline, ATP-binding subunit GO:0015220|GO:0015871|GO:0055052 BV404_RS14385 aadfcc4ba22221adb6b5c2ca22fb4805 394 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS14385 aadfcc4ba22221adb6b5c2ca22fb4805 394 SUPERFAMILY SSF52540 43 273 1.56E-70 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS14385 aadfcc4ba22221adb6b5c2ca22fb4805 394 SMART SM00382 52 253 8.7E-15 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS14385 aadfcc4ba22221adb6b5c2ca22fb4805 394 Pfam PF00005 ABC transporter 43 195 6.7E-28 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS14385 aadfcc4ba22221adb6b5c2ca22fb4805 394 Gene3D G3DSA:3.40.50.300 3 268 1.9E-69 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS10990 810d206bb521e53f97dd9c5b2243d6d5 617 Pfam PF13721 SecD export protein N-terminal TM region 2 103 1.6E-37 T 09-03-2017 IPR027398 SecD export protein N-terminal TM domain BV404_RS10990 810d206bb521e53f97dd9c5b2243d6d5 617 Pfam PF02355 Protein export membrane protein 435 596 4.0E-19 T 09-03-2017 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial BV404_RS10990 810d206bb521e53f97dd9c5b2243d6d5 617 SUPERFAMILY SSF82866 412 608 9.29E-45 T 09-03-2017 BV404_RS10990 810d206bb521e53f97dd9c5b2243d6d5 617 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 347 596 5.2E-80 T 09-03-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BV404_RS10990 810d206bb521e53f97dd9c5b2243d6d5 617 Pfam PF07549 SecD/SecF GG Motif 115 141 2.9E-7 T 09-03-2017 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site BV404_RS10990 810d206bb521e53f97dd9c5b2243d6d5 617 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 617 50.175 T 09-03-2017 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 BV404_RS10990 810d206bb521e53f97dd9c5b2243d6d5 617 Gene3D G3DSA:1.20.1640.10 411 609 6.9E-26 T 09-03-2017 BV404_RS10990 810d206bb521e53f97dd9c5b2243d6d5 617 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 603 1.0E-148 T 09-03-2017 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 BV404_RS13590 f75857e882870b6476571a624384bf78 334 Gene3D G3DSA:3.40.50.720 1 181 3.5E-54 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS13590 f75857e882870b6476571a624384bf78 334 Gene3D G3DSA:3.90.25.10 182 222 2.8E-27 T 09-03-2017 BV404_RS13590 f75857e882870b6476571a624384bf78 334 Gene3D G3DSA:3.90.25.10 263 332 2.8E-27 T 09-03-2017 BV404_RS13590 f75857e882870b6476571a624384bf78 334 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 322 3.2E-57 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS13590 f75857e882870b6476571a624384bf78 334 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 3.6E-29 T 09-03-2017 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 BV404_RS13590 f75857e882870b6476571a624384bf78 334 PRINTS PR01713 Nucleotide sugar epimerase signature 215 230 3.6E-29 T 09-03-2017 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 BV404_RS13590 f75857e882870b6476571a624384bf78 334 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 3.6E-29 T 09-03-2017 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 BV404_RS13590 f75857e882870b6476571a624384bf78 334 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 3.6E-29 T 09-03-2017 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 BV404_RS13590 f75857e882870b6476571a624384bf78 334 SUPERFAMILY SSF51735 1 332 3.66E-91 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS01005 67046fd3d131c37071dea52999939410 130 Pfam PF00410 Ribosomal protein S8 5 129 9.1E-47 T 09-03-2017 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS01005 67046fd3d131c37071dea52999939410 130 Gene3D G3DSA:3.30.1370.30 2 71 1.4E-25 T 09-03-2017 BV404_RS01005 67046fd3d131c37071dea52999939410 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 09-03-2017 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS01005 67046fd3d131c37071dea52999939410 130 SUPERFAMILY SSF56047 2 129 1.7E-43 T 09-03-2017 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS01005 67046fd3d131c37071dea52999939410 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 30.705 T 09-03-2017 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS01005 67046fd3d131c37071dea52999939410 130 Gene3D G3DSA:3.30.1490.10 74 129 4.1E-27 T 09-03-2017 BV404_RS02900 ccab01d2e80fa74abe7d995a1c90163e 243 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 44.054 T 09-03-2017 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 BV404_RS02900 ccab01d2e80fa74abe7d995a1c90163e 243 PIRSF PIRSF005650 4 243 4.6E-89 T 09-03-2017 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 BV404_RS02900 ccab01d2e80fa74abe7d995a1c90163e 243 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 1.9E-102 T 09-03-2017 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 BV404_RS02900 ccab01d2e80fa74abe7d995a1c90163e 243 Gene3D G3DSA:3.40.1160.10 2 240 1.5E-86 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase BV404_RS02900 ccab01d2e80fa74abe7d995a1c90163e 243 SUPERFAMILY SSF53633 7 240 1.06E-71 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase BV404_RS02900 ccab01d2e80fa74abe7d995a1c90163e 243 Pfam PF00696 Amino acid kinase family 11 219 2.2E-26 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase BV404_RS11725 c78d749066b0003ee2ba2a3810f98295 196 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 34.88 T 09-03-2017 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 BV404_RS11725 c78d749066b0003ee2ba2a3810f98295 196 Pfam PF13580 SIS domain 9 144 2.7E-34 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 BV404_RS11725 c78d749066b0003ee2ba2a3810f98295 196 SUPERFAMILY SSF53697 1 191 2.83E-57 T 09-03-2017 BV404_RS11725 c78d749066b0003ee2ba2a3810f98295 196 Gene3D G3DSA:3.40.50.10490 2 191 1.7E-59 T 09-03-2017 BV404_RS18150 9f76f6ad4e214a49739ce4a3f27f94bd 183 Gene3D G3DSA:2.50.20.10 15 175 4.7E-53 T 09-03-2017 BV404_RS18150 9f76f6ad4e214a49739ce4a3f27f94bd 183 SUPERFAMILY SSF89392 21 175 1.37E-42 T 09-03-2017 IPR029046 Lipoprotein localisation LolA/LolB/LppX BV404_RS18150 9f76f6ad4e214a49739ce4a3f27f94bd 183 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 30 172 4.0E-32 T 09-03-2017 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 BV404_RS18150 9f76f6ad4e214a49739ce4a3f27f94bd 183 Pfam PF03550 Outer membrane lipoprotein LolB 46 183 1.8E-38 T 09-03-2017 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 BV404_RS18150 9f76f6ad4e214a49739ce4a3f27f94bd 183 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 5 183 20.986 T 09-03-2017 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 BV404_RS00620 e1c75b244d056401a8567b00fadf5eca 545 Gene3D G3DSA:1.10.560.10 370 518 2.2E-40 T 09-03-2017 IPR027413 GroEL-like equatorial domain BV404_RS00620 e1c75b244d056401a8567b00fadf5eca 545 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 09-03-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 BV404_RS00620 e1c75b244d056401a8567b00fadf5eca 545 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 09-03-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 BV404_RS00620 e1c75b244d056401a8567b00fadf5eca 545 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 09-03-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 BV404_RS00620 e1c75b244d056401a8567b00fadf5eca 545 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 09-03-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 BV404_RS00620 e1c75b244d056401a8567b00fadf5eca 545 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 09-03-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 BV404_RS00620 e1c75b244d056401a8567b00fadf5eca 545 SUPERFAMILY SSF54849 137 203 2.27E-24 T 09-03-2017 BV404_RS00620 e1c75b244d056401a8567b00fadf5eca 545 Hamap MF_00600 60 kDa chaperonin [groL]. 2 544 41.555 T 09-03-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 BV404_RS00620 e1c75b244d056401a8567b00fadf5eca 545 Gene3D G3DSA:1.10.560.10 3 201 6.4E-49 T 09-03-2017 IPR027413 GroEL-like equatorial domain BV404_RS00620 e1c75b244d056401a8567b00fadf5eca 545 SUPERFAMILY SSF52029 185 376 7.5E-82 T 09-03-2017 IPR027409 GroEL-like apical domain BV404_RS00620 e1c75b244d056401a8567b00fadf5eca 545 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 5.6E-253 T 09-03-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 BV404_RS00620 e1c75b244d056401a8567b00fadf5eca 545 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 09-03-2017 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020 BV404_RS00620 e1c75b244d056401a8567b00fadf5eca 545 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 3.0E-96 T 09-03-2017 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 BV404_RS00620 e1c75b244d056401a8567b00fadf5eca 545 Gene3D G3DSA:3.50.7.10 202 369 1.3E-92 T 09-03-2017 IPR027409 GroEL-like apical domain BV404_RS00620 e1c75b244d056401a8567b00fadf5eca 545 SUPERFAMILY SSF48592 406 521 6.11E-77 T 09-03-2017 BV404_RS00620 e1c75b244d056401a8567b00fadf5eca 545 SUPERFAMILY SSF48592 7 134 6.11E-77 T 09-03-2017 BV404_RS11720 134e5b4d94203d57bf5f5908826a5249 122 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 6 120 8.4E-35 T 09-03-2017 IPR003509 Uncharacterised protein family UPF0102 BV404_RS11720 134e5b4d94203d57bf5f5908826a5249 122 SUPERFAMILY SSF52980 7 112 3.13E-22 T 09-03-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 BV404_RS11720 134e5b4d94203d57bf5f5908826a5249 122 Gene3D G3DSA:3.40.1350.10 13 119 6.6E-35 T 09-03-2017 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 Reactome: R-HSA-6784531 BV404_RS11720 134e5b4d94203d57bf5f5908826a5249 122 Pfam PF02021 Uncharacterised protein family UPF0102 13 105 4.4E-28 T 09-03-2017 IPR003509 Uncharacterised protein family UPF0102 BV404_RS11720 134e5b4d94203d57bf5f5908826a5249 122 Hamap MF_00048 UPF0102 protein YraN [yraN]. 6 118 22.886 T 09-03-2017 IPR003509 Uncharacterised protein family UPF0102 BV404_RS09150 7395e85652dff1dca7e5161961571754 94 Pfam PF06305 Protein of unknown function (DUF1049) 22 81 9.7E-19 T 09-03-2017 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 BV404_RS09150 7395e85652dff1dca7e5161961571754 94 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 93 20.718 T 09-03-2017 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 BV404_RS11115 6a8c61c5a354b237d9bcd5a35f19aba2 194 Pfam PF04545 Sigma-70, region 4 139 186 2.3E-14 T 09-03-2017 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS11115 6a8c61c5a354b237d9bcd5a35f19aba2 194 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 54 86 - T 09-03-2017 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS11115 6a8c61c5a354b237d9bcd5a35f19aba2 194 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 27 187 6.0E-29 T 09-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS11115 6a8c61c5a354b237d9bcd5a35f19aba2 194 SUPERFAMILY SSF88946 7 118 6.28E-26 T 09-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS11115 6a8c61c5a354b237d9bcd5a35f19aba2 194 SUPERFAMILY SSF88659 127 188 8.04E-15 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS11115 6a8c61c5a354b237d9bcd5a35f19aba2 194 Gene3D G3DSA:1.10.1740.10 10 114 3.9E-24 T 09-03-2017 BV404_RS11115 6a8c61c5a354b237d9bcd5a35f19aba2 194 Pfam PF04542 Sigma-70 region 2 34 99 5.6E-16 T 09-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS11115 6a8c61c5a354b237d9bcd5a35f19aba2 194 Gene3D G3DSA:1.10.10.10 127 190 1.8E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS05730 431f9404d550e849a64c1b649ecf7de1 242 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 36 221 1.3E-74 T 09-03-2017 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 BV404_RS05730 431f9404d550e849a64c1b649ecf7de1 242 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 242 86.995 T 09-03-2017 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 BV404_RS05730 431f9404d550e849a64c1b649ecf7de1 242 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 37 205 1.1E-66 T 09-03-2017 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 BV404_RS05730 431f9404d550e849a64c1b649ecf7de1 242 SUPERFAMILY SSF55729 4 233 6.25E-85 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS03745 8cec09444a08e6445f9c5194573c9c89 73 Pfam PF10981 Protein of unknown function (DUF2788) 18 67 1.3E-18 T 09-03-2017 IPR021249 Protein of unknown function DUF2788 BV404_RS02160 fc70ae8d24d72bd7505b9c476ca00767 113 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 113 35.671 T 09-03-2017 IPR023063 FeS cluster insertion protein ErpA GO:0016226 BV404_RS02160 fc70ae8d24d72bd7505b9c476ca00767 113 SUPERFAMILY SSF89360 7 99 2.55E-29 T 09-03-2017 IPR000361 FeS cluster biogenesis BV404_RS02160 fc70ae8d24d72bd7505b9c476ca00767 113 Pfam PF01521 Iron-sulphur cluster biosynthesis 8 108 2.5E-18 T 09-03-2017 IPR000361 FeS cluster biogenesis BV404_RS02160 fc70ae8d24d72bd7505b9c476ca00767 113 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 113 1.5E-36 T 09-03-2017 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 BV404_RS02160 fc70ae8d24d72bd7505b9c476ca00767 113 Gene3D G3DSA:2.60.300.12 5 99 8.2E-31 T 09-03-2017 IPR000361 FeS cluster biogenesis BV404_RS02160 fc70ae8d24d72bd7505b9c476ca00767 113 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 94 111 - T 09-03-2017 IPR017870 FeS cluster insertion, C-terminal, conserved site BV404_RS03170 32d7fe67fbd028d27716e5092e48ec23 308 SMART SM00260 17 153 2.1E-25 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 BV404_RS03170 32d7fe67fbd028d27716e5092e48ec23 308 Pfam PF01584 CheW-like domain 21 155 2.5E-35 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 BV404_RS03170 32d7fe67fbd028d27716e5092e48ec23 308 SUPERFAMILY SSF50341 16 157 2.75E-36 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 BV404_RS03170 32d7fe67fbd028d27716e5092e48ec23 308 Pfam PF00072 Response regulator receiver domain 184 302 3.4E-18 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS03170 32d7fe67fbd028d27716e5092e48ec23 308 PIRSF PIRSF002867 1 308 2.2E-104 T 09-03-2017 IPR024181 Chemotaxis response regulator CheV BV404_RS03170 32d7fe67fbd028d27716e5092e48ec23 308 Gene3D G3DSA:3.40.50.2300 182 306 7.9E-27 T 09-03-2017 BV404_RS03170 32d7fe67fbd028d27716e5092e48ec23 308 Gene3D G3DSA:2.30.30.40 88 145 3.8E-4 T 09-03-2017 BV404_RS03170 32d7fe67fbd028d27716e5092e48ec23 308 SUPERFAMILY SSF52172 183 306 2.13E-25 T 09-03-2017 IPR011006 CheY-like superfamily BV404_RS03170 32d7fe67fbd028d27716e5092e48ec23 308 SMART SM00448 182 302 1.4E-19 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS02420 f47ef89b3cd5570d74d52a40bb18f86e 382 Pfam PF02690 Na+/Pi-cotransporter 218 326 1.7E-19 T 09-03-2017 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 BV404_RS02420 f47ef89b3cd5570d74d52a40bb18f86e 382 Pfam PF02690 Na+/Pi-cotransporter 30 152 2.3E-21 T 09-03-2017 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 BV404_RS08185 d4642afd28addeeb684e0da0cab97b8e 565 Gene3D G3DSA:3.40.1770.10 362 557 8.6E-164 T 09-03-2017 BV404_RS08185 d4642afd28addeeb684e0da0cab97b8e 565 Gene3D G3DSA:3.40.1770.10 14 146 8.6E-164 T 09-03-2017 BV404_RS08185 d4642afd28addeeb684e0da0cab97b8e 565 Gene3D G3DSA:3.40.50.10730 147 351 3.3E-90 T 09-03-2017 BV404_RS08185 d4642afd28addeeb684e0da0cab97b8e 565 SUPERFAMILY SSF111326 11 557 1.96E-260 T 09-03-2017 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BV404_RS08185 d4642afd28addeeb684e0da0cab97b8e 565 Hamap MF_00577 Urocanate hydratase [hutU]. 3 558 49.498 T 09-03-2017 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BV404_RS08185 d4642afd28addeeb684e0da0cab97b8e 565 TIGRFAM TIGR01228 hutU: urocanate hydratase 15 556 1.2E-291 T 09-03-2017 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BV404_RS08185 d4642afd28addeeb684e0da0cab97b8e 565 Pfam PF01175 Urocanase 17 549 8.4E-260 T 09-03-2017 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BV404_RS08185 d4642afd28addeeb684e0da0cab97b8e 565 ProSitePatterns PS01233 Urocanase signature. 444 459 - T 09-03-2017 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BV404_RS08185 d4642afd28addeeb684e0da0cab97b8e 565 PIRSF PIRSF001423 1 563 5.9E-295 T 09-03-2017 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BV404_RS02165 e7eb44786686265039355027e8a86266 366 Gene3D G3DSA:2.40.50.100 82 115 3.8E-14 T 09-03-2017 BV404_RS02165 e7eb44786686265039355027e8a86266 366 Gene3D G3DSA:2.40.50.100 176 208 3.8E-14 T 09-03-2017 BV404_RS02165 e7eb44786686265039355027e8a86266 366 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 58 357 3.9E-49 T 09-03-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 BV404_RS02165 e7eb44786686265039355027e8a86266 366 SUPERFAMILY SSF111369 71 285 2.48E-30 T 09-03-2017 BV404_RS02165 e7eb44786686265039355027e8a86266 366 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 70 276 1.5E-21 T 09-03-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BV404_RS02745 e667dc9df8fded14f72edca803bf0df8 515 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 335 502 1.9E-36 T 09-03-2017 IPR000160 GGDEF domain BV404_RS02745 e667dc9df8fded14f72edca803bf0df8 515 Pfam PF05228 CHASE4 domain 58 211 1.2E-23 T 09-03-2017 IPR007892 CHASE4 BV404_RS02745 e667dc9df8fded14f72edca803bf0df8 515 SMART SM00267 328 502 4.2E-45 T 09-03-2017 IPR000160 GGDEF domain BV404_RS02745 e667dc9df8fded14f72edca803bf0df8 515 Pfam PF00990 Diguanylate cyclase, GGDEF domain 340 497 6.8E-36 T 09-03-2017 IPR000160 GGDEF domain BV404_RS02745 e667dc9df8fded14f72edca803bf0df8 515 SUPERFAMILY SSF55073 344 501 2.04E-32 T 09-03-2017 IPR029787 Nucleotide cyclase BV404_RS02745 e667dc9df8fded14f72edca803bf0df8 515 Gene3D G3DSA:3.30.70.270 340 503 3.6E-38 T 09-03-2017 BV404_RS01620 28fb69a08dbf96ea6189fbbc79f9bd0d 177 SMART SM00014 61 170 1.0E-12 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BV404_RS01620 28fb69a08dbf96ea6189fbbc79f9bd0d 177 Pfam PF01569 PAP2 superfamily 62 173 1.5E-19 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BV404_RS01620 28fb69a08dbf96ea6189fbbc79f9bd0d 177 SUPERFAMILY SSF48317 6 174 1.31E-37 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BV404_RS01620 28fb69a08dbf96ea6189fbbc79f9bd0d 177 Gene3D G3DSA:1.20.144.10 6 175 4.7E-43 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BV404_RS14475 8c869c34111df077b9bb4451cd4e4995 175 Pfam PF00210 Ferritin-like domain 8 143 3.3E-39 T 09-03-2017 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 BV404_RS14475 8c869c34111df077b9bb4451cd4e4995 175 SUPERFAMILY SSF47240 1 159 2.18E-58 T 09-03-2017 IPR009078 Ferritin-like superfamily BV404_RS14475 8c869c34111df077b9bb4451cd4e4995 175 Gene3D G3DSA:1.20.1260.10 1 161 1.0E-62 T 09-03-2017 IPR012347 Ferritin-related BV404_RS11765 8c4ebbff3077d916b23b6eda522d4d4b 142 Pfam PF00572 Ribosomal protein L13 15 138 8.9E-58 T 09-03-2017 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 BV404_RS11765 8c4ebbff3077d916b23b6eda522d4d4b 142 Gene3D G3DSA:3.90.1180.10 3 141 3.9E-66 T 09-03-2017 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 BV404_RS11765 8c4ebbff3077d916b23b6eda522d4d4b 142 PIRSF PIRSF002181 1 142 4.6E-53 T 09-03-2017 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 BV404_RS11765 8c4ebbff3077d916b23b6eda522d4d4b 142 SUPERFAMILY SSF52161 1 140 4.32E-61 T 09-03-2017 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 BV404_RS11765 8c4ebbff3077d916b23b6eda522d4d4b 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 09-03-2017 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 BV404_RS11765 8c4ebbff3077d916b23b6eda522d4d4b 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.963 T 09-03-2017 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 BV404_RS11765 8c4ebbff3077d916b23b6eda522d4d4b 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 2.5E-65 T 09-03-2017 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS01300 9d6d9ffc52f9ed8a01115e5a1857962e 267 Pfam PF00005 ABC transporter 23 170 2.9E-28 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS01300 9d6d9ffc52f9ed8a01115e5a1857962e 267 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS01300 9d6d9ffc52f9ed8a01115e5a1857962e 267 SUPERFAMILY SSF52540 6 236 1.02E-64 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS01300 9d6d9ffc52f9ed8a01115e5a1857962e 267 Gene3D G3DSA:3.40.50.300 3 236 5.9E-68 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS01300 9d6d9ffc52f9ed8a01115e5a1857962e 267 SMART SM00382 31 237 1.2E-10 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS03620 c9445a7eaa6639d216c657095240f62e 136 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 54 128 3.2E-33 T 09-03-2017 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 BV404_RS03620 c9445a7eaa6639d216c657095240f62e 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 73 89 1.1E-27 T 09-03-2017 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 BV404_RS03620 c9445a7eaa6639d216c657095240f62e 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 56 72 1.1E-27 T 09-03-2017 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 BV404_RS03620 c9445a7eaa6639d216c657095240f62e 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 102 117 1.1E-27 T 09-03-2017 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 BV404_RS03620 c9445a7eaa6639d216c657095240f62e 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 89 102 1.1E-27 T 09-03-2017 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 BV404_RS03620 c9445a7eaa6639d216c657095240f62e 136 Gene3D G3DSA:2.30.330.10 47 136 1.0E-37 T 09-03-2017 BV404_RS03620 c9445a7eaa6639d216c657095240f62e 136 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 56 126 1.8E-24 T 09-03-2017 IPR001543 Surface presentation of antigen (SpoA) BV404_RS03620 c9445a7eaa6639d216c657095240f62e 136 SUPERFAMILY SSF101801 54 134 6.02E-25 T 09-03-2017 IPR001543 Surface presentation of antigen (SpoA) BV404_RS05895 09bef4ea0007369d72fcba02b23f6975 280 Pfam PF01226 Formate/nitrite transporter 13 275 1.8E-78 T 09-03-2017 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 BV404_RS05895 09bef4ea0007369d72fcba02b23f6975 280 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 13 278 3.1E-114 T 09-03-2017 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 BV404_RS05895 09bef4ea0007369d72fcba02b23f6975 280 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 25 279 1.2E-81 T 09-03-2017 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 BV404_RS05895 09bef4ea0007369d72fcba02b23f6975 280 Gene3D G3DSA:1.20.1080.10 28 279 1.3E-87 T 09-03-2017 IPR023271 Aquaporin-like Reactome: R-HSA-432047 BV404_RS05895 09bef4ea0007369d72fcba02b23f6975 280 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 82 91 - T 09-03-2017 IPR024002 Formate/nitrite transporter, conserved site BV404_RS05895 09bef4ea0007369d72fcba02b23f6975 280 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 167 177 - T 09-03-2017 IPR024002 Formate/nitrite transporter, conserved site BV404_RS07570 7bea7fc57b1d793efffbd850c7061115 313 Gene3D G3DSA:3.40.50.1820 13 310 6.3E-77 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold BV404_RS07570 7bea7fc57b1d793efffbd850c7061115 313 Pfam PF07859 alpha/beta hydrolase fold 86 289 1.2E-61 T 09-03-2017 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 BV404_RS07570 7bea7fc57b1d793efffbd850c7061115 313 SUPERFAMILY SSF53474 68 306 7.08E-58 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold BV404_RS12210 8be822ae374ef432910fbc4ebe4e9616 358 PIRSF PIRSF001359 13 358 3.2E-96 T 09-03-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BV404_RS12210 8be822ae374ef432910fbc4ebe4e9616 358 SUPERFAMILY SSF51569 4 356 4.4E-131 T 09-03-2017 BV404_RS12210 8be822ae374ef432910fbc4ebe4e9616 358 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 356 3.7E-112 T 09-03-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BV404_RS12210 8be822ae374ef432910fbc4ebe4e9616 358 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 354 5.6E-92 T 09-03-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BV404_RS12210 8be822ae374ef432910fbc4ebe4e9616 358 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 171 182 - T 09-03-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BV404_RS12210 8be822ae374ef432910fbc4ebe4e9616 358 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 100 111 - T 09-03-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BV404_RS12210 8be822ae374ef432910fbc4ebe4e9616 358 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 357 5.6E-180 T 09-03-2017 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 BV404_RS12210 8be822ae374ef432910fbc4ebe4e9616 358 Gene3D G3DSA:3.20.20.70 11 355 5.8E-126 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS07620 de7ee50e802ba961018133956f2a5afc 342 SUPERFAMILY SSF53850 29 259 7.04E-49 T 09-03-2017 BV404_RS07620 de7ee50e802ba961018133956f2a5afc 342 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 257 5.1E-29 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BV404_RS07620 de7ee50e802ba961018133956f2a5afc 342 SMART SM00062 38 267 2.8E-55 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BV404_RS07620 de7ee50e802ba961018133956f2a5afc 342 Gene3D G3DSA:3.40.190.10 129 207 1.9E-13 T 09-03-2017 BV404_RS07620 de7ee50e802ba961018133956f2a5afc 342 Gene3D G3DSA:3.40.190.10 37 128 2.6E-16 T 09-03-2017 BV404_RS07620 de7ee50e802ba961018133956f2a5afc 342 Gene3D G3DSA:3.40.190.10 227 257 2.6E-16 T 09-03-2017 BV404_RS04860 c4537ffab770489f9edd1f4934af35e8 251 Gene3D G3DSA:1.10.10.60 142 200 1.4E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS04860 c4537ffab770489f9edd1f4934af35e8 251 SUPERFAMILY SSF46689 199 248 1.88E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS04860 c4537ffab770489f9edd1f4934af35e8 251 Pfam PF12833 Helix-turn-helix domain 169 246 2.3E-22 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BV404_RS04860 c4537ffab770489f9edd1f4934af35e8 251 SMART SM00342 163 245 6.5E-26 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BV404_RS04860 c4537ffab770489f9edd1f4934af35e8 251 Pfam PF02311 AraC-like ligand binding domain 13 77 2.9E-9 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 BV404_RS04860 c4537ffab770489f9edd1f4934af35e8 251 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 200 241 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BV404_RS04860 c4537ffab770489f9edd1f4934af35e8 251 Gene3D G3DSA:1.10.10.60 201 246 3.9E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS04860 c4537ffab770489f9edd1f4934af35e8 251 SUPERFAMILY SSF51182 13 169 1.25E-11 T 09-03-2017 IPR011051 RmlC-like cupin domain BV404_RS04860 c4537ffab770489f9edd1f4934af35e8 251 Gene3D G3DSA:2.60.120.10 14 76 6.3E-11 T 09-03-2017 IPR014710 RmlC-like jelly roll fold BV404_RS12455 6faf4a6e1407d471830206d446472fb4 391 PIRSF PIRSF002401 1 376 9.5E-136 T 09-03-2017 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 BV404_RS12455 6faf4a6e1407d471830206d446472fb4 391 Gene3D G3DSA:2.70.210.12 2 155 8.1E-56 T 09-03-2017 IPR006169 GTP1/OBG domain GO:0005525 BV404_RS12455 6faf4a6e1407d471830206d446472fb4 391 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 09-03-2017 IPR006074 GTP1/OBG, conserved site GO:0005525 BV404_RS12455 6faf4a6e1407d471830206d446472fb4 391 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 4.0E-141 T 09-03-2017 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 BV404_RS12455 6faf4a6e1407d471830206d446472fb4 391 Gene3D G3DSA:3.40.50.300 156 340 1.3E-47 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS12455 6faf4a6e1407d471830206d446472fb4 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 7.7E-34 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 BV404_RS12455 6faf4a6e1407d471830206d446472fb4 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 7.7E-34 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 BV404_RS12455 6faf4a6e1407d471830206d446472fb4 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 7.7E-34 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 BV404_RS12455 6faf4a6e1407d471830206d446472fb4 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 7.7E-34 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 BV404_RS12455 6faf4a6e1407d471830206d446472fb4 391 Hamap MF_01454 GTPase Obg [obg]. 2 333 46.636 T 09-03-2017 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 BV404_RS12455 6faf4a6e1407d471830206d446472fb4 391 Pfam PF01018 GTP1/OBG 3 156 1.1E-56 T 09-03-2017 IPR006169 GTP1/OBG domain GO:0005525 BV404_RS12455 6faf4a6e1407d471830206d446472fb4 391 SUPERFAMILY SSF52540 151 343 5.91E-47 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS12455 6faf4a6e1407d471830206d446472fb4 391 Pfam PF01926 50S ribosome-binding GTPase 162 284 1.8E-23 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 BV404_RS12455 6faf4a6e1407d471830206d446472fb4 391 SUPERFAMILY SSF82051 2 157 2.49E-54 T 09-03-2017 IPR006169 GTP1/OBG domain GO:0005525 BV404_RS02500 d2fe0e6157992c4f7b50cf214364aec4 238 Pfam PF04397 LytTr DNA-binding domain 143 235 2.6E-24 T 09-03-2017 IPR007492 LytTR DNA-binding domain GO:0003677 BV404_RS02500 d2fe0e6157992c4f7b50cf214364aec4 238 Gene3D G3DSA:3.40.50.2300 1 120 6.0E-31 T 09-03-2017 BV404_RS02500 d2fe0e6157992c4f7b50cf214364aec4 238 Gene3D G3DSA:2.20.25.10 215 237 3.2E-7 T 09-03-2017 BV404_RS02500 d2fe0e6157992c4f7b50cf214364aec4 238 SMART SM00448 2 112 1.2E-26 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS02500 d2fe0e6157992c4f7b50cf214364aec4 238 Pfam PF00072 Response regulator receiver domain 5 112 9.3E-23 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS02500 d2fe0e6157992c4f7b50cf214364aec4 238 SUPERFAMILY SSF52172 1 124 4.13E-31 T 09-03-2017 IPR011006 CheY-like superfamily BV404_RS02500 d2fe0e6157992c4f7b50cf214364aec4 238 Gene3D G3DSA:2.40.50.40 136 198 3.7E-10 T 09-03-2017 BV404_RS02500 d2fe0e6157992c4f7b50cf214364aec4 238 SMART SM00850 142 236 3.0E-27 T 09-03-2017 IPR007492 LytTR DNA-binding domain GO:0003677 BV404_RS01810 afcbfe594ff7a4f92da0d8d0ea6414e2 530 SUPERFAMILY SSF47090 449 522 7.06E-12 T 09-03-2017 IPR002477 Peptidoglycan binding-like BV404_RS01810 afcbfe594ff7a4f92da0d8d0ea6414e2 530 SUPERFAMILY SSF52540 10 263 6.23E-34 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS01810 afcbfe594ff7a4f92da0d8d0ea6414e2 530 Gene3D G3DSA:1.10.101.10 451 521 2.3E-13 T 09-03-2017 IPR002477 Peptidoglycan binding-like BV404_RS01810 afcbfe594ff7a4f92da0d8d0ea6414e2 530 SMART SM00382 42 195 1.1E-8 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS01810 afcbfe594ff7a4f92da0d8d0ea6414e2 530 Gene3D G3DSA:3.40.50.300 27 183 1.6E-21 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS01810 afcbfe594ff7a4f92da0d8d0ea6414e2 530 Pfam PF13401 AAA domain 42 168 2.1E-21 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS01810 afcbfe594ff7a4f92da0d8d0ea6414e2 530 Pfam PF01471 Putative peptidoglycan binding domain 459 515 5.3E-10 T 09-03-2017 IPR002477 Peptidoglycan binding-like BV404_RS09495 d9493ec8c43cb637db061d40e24f4ed4 294 PIRSF PIRSF016020 2 294 3.0E-64 T 09-03-2017 IPR025532 Glucose-6-phosphate 1-epimerase BV404_RS09495 d9493ec8c43cb637db061d40e24f4ed4 294 SUPERFAMILY SSF74650 8 290 3.2E-75 T 09-03-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 BV404_RS09495 d9493ec8c43cb637db061d40e24f4ed4 294 Pfam PF01263 Aldose 1-epimerase 27 291 1.1E-51 T 09-03-2017 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 BV404_RS09495 d9493ec8c43cb637db061d40e24f4ed4 294 Gene3D G3DSA:2.70.98.10 12 293 1.9E-88 T 09-03-2017 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 BV404_RS05585 1f9520501b7dd7c3a817bb4581a67acd 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 2.4E-15 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS05585 1f9520501b7dd7c3a817bb4581a67acd 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 179 2.4E-15 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS05585 1f9520501b7dd7c3a817bb4581a67acd 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 160 2.4E-15 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS05585 1f9520501b7dd7c3a817bb4581a67acd 246 SUPERFAMILY SSF51735 4 240 2.78E-47 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS05585 1f9520501b7dd7c3a817bb4581a67acd 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 128 156 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BV404_RS05585 1f9520501b7dd7c3a817bb4581a67acd 246 Gene3D G3DSA:3.40.50.720 4 241 5.9E-47 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS05585 1f9520501b7dd7c3a817bb4581a67acd 246 Pfam PF00106 short chain dehydrogenase 4 182 1.7E-35 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS09830 53bb0994616c2aed0993cd56f2eee9c8 145 Pfam PF10952 Protein of unknown function (DUF2753) 6 145 2.3E-76 T 09-03-2017 IPR020206 Uncharacterised protein family, VP2110 BV404_RS09830 53bb0994616c2aed0993cd56f2eee9c8 145 ProDom PD087558 YRN2_VIBPA ORF2 VV1184 VV13101 MOTY 3'REGION VC1009 VP2110 3 144 1.0E-65 T 09-03-2017 IPR020206 Uncharacterised protein family, VP2110 BV404_RS06005 abf7ef4c9b07fc49b760758cfc6cf4ac 1034 SUPERFAMILY SSF82714 728 803 8.11E-8 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BV404_RS06005 abf7ef4c9b07fc49b760758cfc6cf4ac 1034 Gene3D G3DSA:3.30.2090.10 197 281 1.9E-12 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BV404_RS06005 abf7ef4c9b07fc49b760758cfc6cf4ac 1034 Gene3D G3DSA:3.30.2090.10 729 803 3.8E-5 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BV404_RS06005 abf7ef4c9b07fc49b760758cfc6cf4ac 1034 Pfam PF00873 AcrB/AcrD/AcrF family 18 1028 8.6E-170 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS06005 abf7ef4c9b07fc49b760758cfc6cf4ac 1034 Gene3D G3DSA:1.20.1640.10 304 513 6.1E-40 T 09-03-2017 BV404_RS06005 abf7ef4c9b07fc49b760758cfc6cf4ac 1034 SUPERFAMILY SSF82866 306 505 8.37E-34 T 09-03-2017 BV404_RS06005 abf7ef4c9b07fc49b760758cfc6cf4ac 1034 SUPERFAMILY SSF82866 809 1030 2.22E-46 T 09-03-2017 BV404_RS06005 abf7ef4c9b07fc49b760758cfc6cf4ac 1034 SUPERFAMILY SSF82693 574 624 8.37E-5 T 09-03-2017 BV404_RS06005 abf7ef4c9b07fc49b760758cfc6cf4ac 1034 SUPERFAMILY SSF82693 54 149 2.27E-21 T 09-03-2017 BV404_RS06005 abf7ef4c9b07fc49b760758cfc6cf4ac 1034 PRINTS PR00702 Acriflavin resistance protein family signature 453 476 1.8E-27 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS06005 abf7ef4c9b07fc49b760758cfc6cf4ac 1034 PRINTS PR00702 Acriflavin resistance protein family signature 346 369 1.8E-27 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS06005 abf7ef4c9b07fc49b760758cfc6cf4ac 1034 PRINTS PR00702 Acriflavin resistance protein family signature 478 501 1.8E-27 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS06005 abf7ef4c9b07fc49b760758cfc6cf4ac 1034 PRINTS PR00702 Acriflavin resistance protein family signature 24 48 1.8E-27 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS06005 abf7ef4c9b07fc49b760758cfc6cf4ac 1034 PRINTS PR00702 Acriflavin resistance protein family signature 52 70 1.8E-27 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS06005 abf7ef4c9b07fc49b760758cfc6cf4ac 1034 PRINTS PR00702 Acriflavin resistance protein family signature 557 574 1.8E-27 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS06005 abf7ef4c9b07fc49b760758cfc6cf4ac 1034 PRINTS PR00702 Acriflavin resistance protein family signature 400 424 1.8E-27 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS06005 abf7ef4c9b07fc49b760758cfc6cf4ac 1034 Gene3D G3DSA:3.30.70.1430 54 153 1.3E-26 T 09-03-2017 BV404_RS06005 abf7ef4c9b07fc49b760758cfc6cf4ac 1034 SUPERFAMILY SSF82714 198 281 1.14E-11 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BV404_RS06005 abf7ef4c9b07fc49b760758cfc6cf4ac 1034 Gene3D G3DSA:1.10.3850.10 818 1028 2.6E-56 T 09-03-2017 BV404_RS06005 abf7ef4c9b07fc49b760758cfc6cf4ac 1034 SUPERFAMILY SSF82693 150 196 1.54E-18 T 09-03-2017 BV404_RS06005 abf7ef4c9b07fc49b760758cfc6cf4ac 1034 SUPERFAMILY SSF82693 284 337 1.54E-18 T 09-03-2017 BV404_RS05295 a239aae2b1f9f47c183db4dca18065c1 409 SUPERFAMILY SSF53901 216 406 3.56E-60 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 BV404_RS05295 a239aae2b1f9f47c183db4dca18065c1 409 SUPERFAMILY SSF53901 3 252 1.34E-53 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 BV404_RS05295 a239aae2b1f9f47c183db4dca18065c1 409 Gene3D G3DSA:3.40.47.10 264 407 4.4E-48 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 BV404_RS05295 a239aae2b1f9f47c183db4dca18065c1 409 Gene3D G3DSA:3.40.47.10 2 260 1.8E-55 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 BV404_RS05295 a239aae2b1f9f47c183db4dca18065c1 409 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 247 4.6E-39 T 09-03-2017 IPR014030 Beta-ketoacyl synthase, N-terminal BV404_RS05295 a239aae2b1f9f47c183db4dca18065c1 409 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 156 172 - T 09-03-2017 IPR018201 Beta-ketoacyl synthase, active site BV404_RS05295 a239aae2b1f9f47c183db4dca18065c1 409 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 363 1.5E-28 T 09-03-2017 IPR014031 Beta-ketoacyl synthase, C-terminal BV404_RS05295 a239aae2b1f9f47c183db4dca18065c1 409 SMART SM00825 Beta-ketoacyl synthase 5 409 6.7E-11 T 09-03-2017 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BV404_RS07305 ebf5504a1a5082aa03f000baeffab719 80 Pfam PF05768 Glutaredoxin-like domain (DUF836) 2 72 1.2E-21 T 09-03-2017 IPR008554 Glutaredoxin-like BV404_RS07305 ebf5504a1a5082aa03f000baeffab719 80 SUPERFAMILY SSF52833 1 74 3.54E-15 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS07305 ebf5504a1a5082aa03f000baeffab719 80 Gene3D G3DSA:3.40.30.10 2 78 2.9E-29 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS09160 4b1a68790d0e71d02bf9b8e4b81203c1 556 Pfam PF00575 S1 RNA binding domain 449 520 9.6E-15 T 09-03-2017 IPR003029 S1 domain GO:0003676 BV404_RS09160 4b1a68790d0e71d02bf9b8e4b81203c1 556 Pfam PF00575 S1 RNA binding domain 18 86 1.2E-6 T 09-03-2017 IPR003029 S1 domain GO:0003676 BV404_RS09160 4b1a68790d0e71d02bf9b8e4b81203c1 556 Pfam PF00575 S1 RNA binding domain 103 171 5.8E-8 T 09-03-2017 IPR003029 S1 domain GO:0003676 BV404_RS09160 4b1a68790d0e71d02bf9b8e4b81203c1 556 Pfam PF00575 S1 RNA binding domain 189 260 1.8E-21 T 09-03-2017 IPR003029 S1 domain GO:0003676 BV404_RS09160 4b1a68790d0e71d02bf9b8e4b81203c1 556 Pfam PF00575 S1 RNA binding domain 362 434 2.1E-20 T 09-03-2017 IPR003029 S1 domain GO:0003676 BV404_RS09160 4b1a68790d0e71d02bf9b8e4b81203c1 556 Pfam PF00575 S1 RNA binding domain 275 347 5.0E-21 T 09-03-2017 IPR003029 S1 domain GO:0003676 BV404_RS09160 4b1a68790d0e71d02bf9b8e4b81203c1 556 PRINTS PR00681 Ribosomal protein S1 signature 155 175 4.9E-97 T 09-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 BV404_RS09160 4b1a68790d0e71d02bf9b8e4b81203c1 556 PRINTS PR00681 Ribosomal protein S1 signature 108 124 4.9E-97 T 09-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 BV404_RS09160 4b1a68790d0e71d02bf9b8e4b81203c1 556 PRINTS PR00681 Ribosomal protein S1 signature 330 348 4.9E-97 T 09-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 BV404_RS09160 4b1a68790d0e71d02bf9b8e4b81203c1 556 PRINTS PR00681 Ribosomal protein S1 signature 126 143 4.9E-97 T 09-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 BV404_RS09160 4b1a68790d0e71d02bf9b8e4b81203c1 556 PRINTS PR00681 Ribosomal protein S1 signature 21 39 4.9E-97 T 09-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 BV404_RS09160 4b1a68790d0e71d02bf9b8e4b81203c1 556 PRINTS PR00681 Ribosomal protein S1 signature 212 233 4.9E-97 T 09-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 BV404_RS09160 4b1a68790d0e71d02bf9b8e4b81203c1 556 PRINTS PR00681 Ribosomal protein S1 signature 290 309 4.9E-97 T 09-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 BV404_RS09160 4b1a68790d0e71d02bf9b8e4b81203c1 556 PRINTS PR00681 Ribosomal protein S1 signature 39 53 4.9E-97 T 09-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 BV404_RS09160 4b1a68790d0e71d02bf9b8e4b81203c1 556 PRINTS PR00681 Ribosomal protein S1 signature 84 103 4.9E-97 T 09-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 BV404_RS09160 4b1a68790d0e71d02bf9b8e4b81203c1 556 Gene3D G3DSA:2.40.50.140 192 278 1.4E-29 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS09160 4b1a68790d0e71d02bf9b8e4b81203c1 556 Gene3D G3DSA:2.40.50.140 21 101 6.8E-11 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS09160 4b1a68790d0e71d02bf9b8e4b81203c1 556 Gene3D G3DSA:2.40.50.140 279 362 3.7E-30 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS09160 4b1a68790d0e71d02bf9b8e4b81203c1 556 Gene3D G3DSA:2.40.50.140 102 172 1.2E-13 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS09160 4b1a68790d0e71d02bf9b8e4b81203c1 556 SUPERFAMILY SSF50249 190 277 2.09E-26 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS09160 4b1a68790d0e71d02bf9b8e4b81203c1 556 SUPERFAMILY SSF50249 347 438 8.21E-21 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS09160 4b1a68790d0e71d02bf9b8e4b81203c1 556 PIRSF PIRSF002111 1 534 4.5E-218 T 09-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 BV404_RS09160 4b1a68790d0e71d02bf9b8e4b81203c1 556 Gene3D G3DSA:2.40.50.140 445 531 2.9E-21 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS09160 4b1a68790d0e71d02bf9b8e4b81203c1 556 Gene3D G3DSA:2.40.50.140 363 442 2.9E-25 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS09160 4b1a68790d0e71d02bf9b8e4b81203c1 556 SUPERFAMILY SSF50249 88 174 2.61E-13 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS09160 4b1a68790d0e71d02bf9b8e4b81203c1 556 SMART SM00316 362 434 4.6E-21 T 09-03-2017 IPR022967 RNA-binding domain, S1 BV404_RS09160 4b1a68790d0e71d02bf9b8e4b81203c1 556 SMART SM00316 190 260 1.2E-27 T 09-03-2017 IPR022967 RNA-binding domain, S1 BV404_RS09160 4b1a68790d0e71d02bf9b8e4b81203c1 556 SMART SM00316 103 171 1.2E-7 T 09-03-2017 IPR022967 RNA-binding domain, S1 BV404_RS09160 4b1a68790d0e71d02bf9b8e4b81203c1 556 SMART SM00316 275 347 1.9E-27 T 09-03-2017 IPR022967 RNA-binding domain, S1 BV404_RS09160 4b1a68790d0e71d02bf9b8e4b81203c1 556 SMART SM00316 19 87 4.9E-4 T 09-03-2017 IPR022967 RNA-binding domain, S1 BV404_RS09160 4b1a68790d0e71d02bf9b8e4b81203c1 556 SMART SM00316 449 520 2.0E-19 T 09-03-2017 IPR022967 RNA-binding domain, S1 BV404_RS09160 4b1a68790d0e71d02bf9b8e4b81203c1 556 SUPERFAMILY SSF50249 4 112 8.06E-18 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS09160 4b1a68790d0e71d02bf9b8e4b81203c1 556 SUPERFAMILY SSF50249 255 364 1.0E-28 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS09160 4b1a68790d0e71d02bf9b8e4b81203c1 556 SUPERFAMILY SSF50249 429 539 2.46E-23 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS09160 4b1a68790d0e71d02bf9b8e4b81203c1 556 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 8.0E-231 T 09-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 BV404_RS02215 e27f118afd51e2919142b7e995f08c10 209 Pfam PF01728 FtsJ-like methyltransferase 31 207 1.8E-55 T 09-03-2017 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 BV404_RS02215 e27f118afd51e2919142b7e995f08c10 209 Gene3D G3DSA:3.40.50.150 1 208 3.1E-73 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS02215 e27f118afd51e2919142b7e995f08c10 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 11 207 28.725 T 09-03-2017 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 BV404_RS02215 e27f118afd51e2919142b7e995f08c10 209 PIRSF PIRSF005461 1 209 5.9E-81 T 09-03-2017 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 BV404_RS02215 e27f118afd51e2919142b7e995f08c10 209 SUPERFAMILY SSF53335 30 209 3.16E-45 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS02455 402179cff71a11c247bf5c2f70cc0dc5 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 142 158 1.0E-18 T 09-03-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 BV404_RS02455 402179cff71a11c247bf5c2f70cc0dc5 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 106 121 1.0E-18 T 09-03-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 BV404_RS02455 402179cff71a11c247bf5c2f70cc0dc5 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 58 66 1.0E-18 T 09-03-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 BV404_RS02455 402179cff71a11c247bf5c2f70cc0dc5 168 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 10 167 17.158 T 09-03-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 BV404_RS02455 402179cff71a11c247bf5c2f70cc0dc5 168 ProSitePatterns PS00855 Signal peptidases II signature. 109 121 - T 09-03-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 BV404_RS02455 402179cff71a11c247bf5c2f70cc0dc5 168 TIGRFAM TIGR00077 lspA: signal peptidase II 8 165 1.1E-47 T 09-03-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 BV404_RS02455 402179cff71a11c247bf5c2f70cc0dc5 168 Pfam PF01252 Signal peptidase (SPase) II 19 161 8.4E-37 T 09-03-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 BV404_RS01330 38ac601bbeee9edd5f15657b3fe44c20 421 Gene3D G3DSA:3.65.10.10 221 416 7.2E-58 T 09-03-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 BV404_RS01330 38ac601bbeee9edd5f15657b3fe44c20 421 Gene3D G3DSA:3.65.10.10 22 220 1.4E-69 T 09-03-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 BV404_RS01330 38ac601bbeee9edd5f15657b3fe44c20 421 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 416 4.5E-183 T 09-03-2017 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BV404_RS01330 38ac601bbeee9edd5f15657b3fe44c20 421 SUPERFAMILY SSF55205 6 418 6.05E-142 T 09-03-2017 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 BV404_RS01330 38ac601bbeee9edd5f15657b3fe44c20 421 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 45.819 T 09-03-2017 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BV404_RS01330 38ac601bbeee9edd5f15657b3fe44c20 421 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 10 407 2.5E-121 T 09-03-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 BV404_RS00960 b998636a81d1843e0b34557d0b5a160a 110 Gene3D G3DSA:3.90.470.10 1 109 8.4E-46 T 09-03-2017 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 BV404_RS00960 b998636a81d1843e0b34557d0b5a160a 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 1.2E-49 T 09-03-2017 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS00960 b998636a81d1843e0b34557d0b5a160a 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 09-03-2017 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS00960 b998636a81d1843e0b34557d0b5a160a 110 SUPERFAMILY SSF54843 1 109 4.06E-45 T 09-03-2017 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 BV404_RS00960 b998636a81d1843e0b34557d0b5a160a 110 Pfam PF00237 Ribosomal protein L22p/L17e 9 107 7.6E-36 T 09-03-2017 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 BV404_RS00960 b998636a81d1843e0b34557d0b5a160a 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 29.671 T 09-03-2017 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS02265 87d2a9e96ddb9fdaa170ff37efb07142 131 Pfam PF02033 Ribosome-binding factor A 7 110 3.8E-30 T 09-03-2017 IPR000238 Ribosome-binding factor A GO:0006364 BV404_RS02265 87d2a9e96ddb9fdaa170ff37efb07142 131 SUPERFAMILY SSF89919 2 105 3.53E-32 T 09-03-2017 IPR023799 Ribosome-binding factor A domain BV404_RS02265 87d2a9e96ddb9fdaa170ff37efb07142 131 Gene3D G3DSA:3.30.300.20 4 119 3.8E-37 T 09-03-2017 IPR015946 K homology domain-like, alpha/beta BV404_RS02265 87d2a9e96ddb9fdaa170ff37efb07142 131 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 3 116 2.9E-35 T 09-03-2017 IPR000238 Ribosome-binding factor A GO:0006364 BV404_RS02265 87d2a9e96ddb9fdaa170ff37efb07142 131 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 98 5.0E-46 T 09-03-2017 IPR000238 Ribosome-binding factor A GO:0006364 BV404_RS02265 87d2a9e96ddb9fdaa170ff37efb07142 131 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 118 21.277 T 09-03-2017 IPR000238 Ribosome-binding factor A GO:0006364 BV404_RS02265 87d2a9e96ddb9fdaa170ff37efb07142 131 ProSitePatterns PS01319 Ribosome-binding factor A signature. 77 98 - T 09-03-2017 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 BV404_RS04115 27200e02cfd2b17a8f7cd1e0d17457db 274 SUPERFAMILY SSF51735 103 268 1.62E-27 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS04115 27200e02cfd2b17a8f7cd1e0d17457db 274 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 5 90 3.0E-17 T 09-03-2017 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 BV404_RS04115 27200e02cfd2b17a8f7cd1e0d17457db 274 Gene3D G3DSA:3.40.192.10 2 107 4.2E-27 T 09-03-2017 BV404_RS04115 27200e02cfd2b17a8f7cd1e0d17457db 274 Gene3D G3DSA:3.40.50.720 108 269 7.5E-38 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS04115 27200e02cfd2b17a8f7cd1e0d17457db 274 SUPERFAMILY SSF53223 2 102 4.78E-21 T 09-03-2017 BV404_RS04590 5d9b59fde38aa84d432033189dfacd25 123 SUPERFAMILY SSF46785 6 117 1.34E-33 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS04590 5d9b59fde38aa84d432033189dfacd25 123 Pfam PF01638 HxlR-like helix-turn-helix 21 108 1.3E-26 T 09-03-2017 IPR002577 Helix-turn-helix, HxlR type BV404_RS04590 5d9b59fde38aa84d432033189dfacd25 123 Gene3D G3DSA:1.10.10.10 5 118 1.3E-46 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS10595 dfcfd060f96652afada9cf7d62d362dc 621 Gene3D G3DSA:3.40.50.970 335 495 2.6E-35 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold BV404_RS10595 dfcfd060f96652afada9cf7d62d362dc 621 SMART SM00861 319 483 2.1E-62 T 09-03-2017 IPR005475 Transketolase-like, pyrimidine-binding domain BV404_RS10595 dfcfd060f96652afada9cf7d62d362dc 621 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 620 45.831 T 09-03-2017 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BV404_RS10595 dfcfd060f96652afada9cf7d62d362dc 621 SUPERFAMILY SSF52922 492 619 1.18E-34 T 09-03-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 BV404_RS10595 dfcfd060f96652afada9cf7d62d362dc 621 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 09-03-2017 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BV404_RS10595 dfcfd060f96652afada9cf7d62d362dc 621 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 14 282 2.8E-119 T 09-03-2017 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BV404_RS10595 dfcfd060f96652afada9cf7d62d362dc 621 Pfam PF02780 Transketolase, C-terminal domain 495 611 1.0E-28 T 09-03-2017 IPR033248 Transketolase, C-terminal domain BV404_RS10595 dfcfd060f96652afada9cf7d62d362dc 621 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 09-03-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BV404_RS10595 dfcfd060f96652afada9cf7d62d362dc 621 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 619 4.2E-301 T 09-03-2017 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BV404_RS10595 dfcfd060f96652afada9cf7d62d362dc 621 SUPERFAMILY SSF52518 317 504 2.49E-57 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold BV404_RS10595 dfcfd060f96652afada9cf7d62d362dc 621 SUPERFAMILY SSF52518 8 199 3.42E-76 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold BV404_RS10595 dfcfd060f96652afada9cf7d62d362dc 621 SUPERFAMILY SSF52518 243 381 3.42E-76 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold BV404_RS10595 dfcfd060f96652afada9cf7d62d362dc 621 Pfam PF02779 Transketolase, pyrimidine binding domain 318 479 4.5E-37 T 09-03-2017 IPR005475 Transketolase-like, pyrimidine-binding domain BV404_RS10595 dfcfd060f96652afada9cf7d62d362dc 621 Gene3D G3DSA:3.40.50.920 496 619 5.2E-39 T 09-03-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 BV404_RS10595 dfcfd060f96652afada9cf7d62d362dc 621 Gene3D G3DSA:3.40.50.970 26 201 2.3E-75 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold BV404_RS10595 dfcfd060f96652afada9cf7d62d362dc 621 Gene3D G3DSA:3.40.50.970 242 334 2.3E-75 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold BV404_RS13730 2f9b9e6deaf6657514b21466a52d59b2 86 Pfam PF10048 Predicted integral membrane protein (DUF2282) 33 82 5.2E-24 T 09-03-2017 IPR018740 Protein of unknown function DUF2282, integral membrane BV404_RS00360 f0555fb44d30baf7957da95c1f7f3d2e 228 Gene3D G3DSA:3.40.1280.10 2 175 6.0E-49 T 09-03-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BV404_RS00360 f0555fb44d30baf7957da95c1f7f3d2e 228 Pfam PF12105 SpoU, rRNA methylase, C-terminal 163 218 7.0E-24 T 09-03-2017 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 BV404_RS00360 f0555fb44d30baf7957da95c1f7f3d2e 228 Pfam PF00588 SpoU rRNA Methylase family 20 159 1.0E-35 T 09-03-2017 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 BV404_RS00360 f0555fb44d30baf7957da95c1f7f3d2e 228 Hamap MF_02060 tRNA (guanosine(18)-2'-O)-methyltransferase [trmH]. 2 197 35.585 T 09-03-2017 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase GO:0008168|GO:0030488 BV404_RS00360 f0555fb44d30baf7957da95c1f7f3d2e 228 SUPERFAMILY SSF75217 5 174 3.92E-49 T 09-03-2017 IPR029028 Alpha/beta knot methyltransferases BV404_RS06060 2af468d8e48ba67029f097c95dff7589 1027 SUPERFAMILY SSF82866 283 477 2.88E-37 T 09-03-2017 BV404_RS06060 2af468d8e48ba67029f097c95dff7589 1027 Gene3D G3DSA:1.10.3850.10 800 1013 1.6E-50 T 09-03-2017 BV404_RS06060 2af468d8e48ba67029f097c95dff7589 1027 SUPERFAMILY SSF82693 259 314 3.27E-11 T 09-03-2017 BV404_RS06060 2af468d8e48ba67029f097c95dff7589 1027 SUPERFAMILY SSF82693 134 175 3.27E-11 T 09-03-2017 BV404_RS06060 2af468d8e48ba67029f097c95dff7589 1027 PRINTS PR00702 Acriflavin resistance protein family signature 453 476 1.4E-24 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS06060 2af468d8e48ba67029f097c95dff7589 1027 PRINTS PR00702 Acriflavin resistance protein family signature 428 451 1.4E-24 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS06060 2af468d8e48ba67029f097c95dff7589 1027 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.4E-24 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS06060 2af468d8e48ba67029f097c95dff7589 1027 PRINTS PR00702 Acriflavin resistance protein family signature 347 368 1.4E-24 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS06060 2af468d8e48ba67029f097c95dff7589 1027 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.4E-24 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS06060 2af468d8e48ba67029f097c95dff7589 1027 PRINTS PR00702 Acriflavin resistance protein family signature 375 399 1.4E-24 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS06060 2af468d8e48ba67029f097c95dff7589 1027 Pfam PF00873 AcrB/AcrD/AcrF family 1 1011 1.9E-147 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS06060 2af468d8e48ba67029f097c95dff7589 1027 SUPERFAMILY SSF82693 42 129 2.25E-13 T 09-03-2017 BV404_RS06060 2af468d8e48ba67029f097c95dff7589 1027 Gene3D G3DSA:3.30.2090.10 713 787 1.5E-8 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BV404_RS06060 2af468d8e48ba67029f097c95dff7589 1027 Gene3D G3DSA:3.30.2090.10 177 254 6.5E-9 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BV404_RS06060 2af468d8e48ba67029f097c95dff7589 1027 SUPERFAMILY SSF82714 178 254 3.92E-9 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BV404_RS06060 2af468d8e48ba67029f097c95dff7589 1027 Gene3D G3DSA:1.20.1640.10 276 478 2.6E-44 T 09-03-2017 BV404_RS06060 2af468d8e48ba67029f097c95dff7589 1027 SUPERFAMILY SSF82866 794 1015 1.96E-40 T 09-03-2017 BV404_RS06060 2af468d8e48ba67029f097c95dff7589 1027 SUPERFAMILY SSF82714 712 788 4.45E-8 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BV404_RS06060 2af468d8e48ba67029f097c95dff7589 1027 Gene3D G3DSA:3.30.70.1430 41 135 1.2E-15 T 09-03-2017 BV404_RS06855 20bc2e6953d474d464975e77e90205a3 430 SUPERFAMILY SSF53850 22 417 7.76E-73 T 09-03-2017 BV404_RS06855 20bc2e6953d474d464975e77e90205a3 430 Pfam PF13416 Bacterial extracellular solute-binding protein 40 354 1.1E-37 T 09-03-2017 BV404_RS06855 20bc2e6953d474d464975e77e90205a3 430 Gene3D G3DSA:3.40.190.10 142 339 1.2E-33 T 09-03-2017 BV404_RS06855 20bc2e6953d474d464975e77e90205a3 430 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 137 154 - T 09-03-2017 IPR006061 Solute-binding family 1, conserved site GO:0005215|GO:0006810 BV404_RS07750 83c21bcfcc1feb3347565fdb2211c171 448 Pfam PF12799 Leucine Rich repeats (2 copies) 38 74 2.6E-6 T 09-03-2017 IPR025875 Leucine rich repeat 4 BV404_RS07750 83c21bcfcc1feb3347565fdb2211c171 448 Gene3D G3DSA:3.30.200.20 201 277 3.0E-7 T 09-03-2017 BV404_RS07750 83c21bcfcc1feb3347565fdb2211c171 448 Gene3D G3DSA:1.10.510.10 309 376 4.4E-13 T 09-03-2017 BV404_RS07750 83c21bcfcc1feb3347565fdb2211c171 448 SMART SM00369 127 149 23.0 T 09-03-2017 IPR003591 Leucine-rich repeat, typical subtype BV404_RS07750 83c21bcfcc1feb3347565fdb2211c171 448 SMART SM00369 58 81 20.0 T 09-03-2017 IPR003591 Leucine-rich repeat, typical subtype BV404_RS07750 83c21bcfcc1feb3347565fdb2211c171 448 SMART SM00369 12 34 310.0 T 09-03-2017 IPR003591 Leucine-rich repeat, typical subtype BV404_RS07750 83c21bcfcc1feb3347565fdb2211c171 448 SMART SM00369 102 126 33.0 T 09-03-2017 IPR003591 Leucine-rich repeat, typical subtype BV404_RS07750 83c21bcfcc1feb3347565fdb2211c171 448 SMART SM00369 38 57 87.0 T 09-03-2017 IPR003591 Leucine-rich repeat, typical subtype BV404_RS07750 83c21bcfcc1feb3347565fdb2211c171 448 SUPERFAMILY SSF56112 201 437 1.17E-28 T 09-03-2017 IPR011009 Protein kinase-like domain BV404_RS07750 83c21bcfcc1feb3347565fdb2211c171 448 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 212 237 - T 09-03-2017 IPR017441 Protein kinase, ATP binding site GO:0005524 BV404_RS07750 83c21bcfcc1feb3347565fdb2211c171 448 Gene3D G3DSA:3.80.10.10 10 197 2.8E-38 T 09-03-2017 IPR032675 Leucine-rich repeat domain, L domain-like BV404_RS07750 83c21bcfcc1feb3347565fdb2211c171 448 SUPERFAMILY SSF52058 9 223 2.38E-38 T 09-03-2017 IPR032675 Leucine-rich repeat domain, L domain-like BV404_RS07750 83c21bcfcc1feb3347565fdb2211c171 448 SMART SM00364 35 54 15.0 T 09-03-2017 BV404_RS07750 83c21bcfcc1feb3347565fdb2211c171 448 SMART SM00364 103 122 36.0 T 09-03-2017 BV404_RS07750 83c21bcfcc1feb3347565fdb2211c171 448 SMART SM00364 126 145 42.0 T 09-03-2017 BV404_RS07750 83c21bcfcc1feb3347565fdb2211c171 448 SMART SM00364 58 77 450.0 T 09-03-2017 BV404_RS07750 83c21bcfcc1feb3347565fdb2211c171 448 Pfam PF07714 Protein tyrosine kinase 206 381 3.0E-17 T 09-03-2017 IPR001245 Serine-threonine/tyrosine-protein kinase catalytic domain GO:0004672|GO:0006468 BV404_RS02080 07b1fb4da1e89d7a47616e011dc0fcf0 541 SUPERFAMILY SSF161098 281 535 3.92E-39 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS02080 07b1fb4da1e89d7a47616e011dc0fcf0 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 341 534 1.5E-7 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS02080 07b1fb4da1e89d7a47616e011dc0fcf0 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 68 254 8.9E-15 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS02080 07b1fb4da1e89d7a47616e011dc0fcf0 541 SUPERFAMILY SSF161098 6 258 4.77E-45 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS02080 07b1fb4da1e89d7a47616e011dc0fcf0 541 Gene3D G3DSA:1.10.3720.10 284 536 2.5E-32 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS02080 07b1fb4da1e89d7a47616e011dc0fcf0 541 Gene3D G3DSA:1.10.3720.10 8 264 1.3E-37 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS04475 48ab614475341cc0531bbf8feccc9324 196 SUPERFAMILY SSF48498 82 195 5.34E-19 T 09-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal BV404_RS04475 48ab614475341cc0531bbf8feccc9324 196 SUPERFAMILY SSF46689 16 84 4.76E-6 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS04475 48ab614475341cc0531bbf8feccc9324 196 Gene3D G3DSA:1.10.357.10 2 196 2.1E-28 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 BV404_RS04475 48ab614475341cc0531bbf8feccc9324 196 Pfam PF13305 WHG domain 91 172 2.8E-10 T 09-03-2017 IPR025996 WHG domain BV404_RS09585 db17bc54123f300b993b6db925cd2deb 187 Gene3D G3DSA:1.10.1740.10 23 116 7.1E-23 T 09-03-2017 BV404_RS09585 db17bc54123f300b993b6db925cd2deb 187 Gene3D G3DSA:1.10.10.10 117 176 6.5E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS09585 db17bc54123f300b993b6db925cd2deb 187 SUPERFAMILY SSF88659 115 176 3.55E-13 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS09585 db17bc54123f300b993b6db925cd2deb 187 Pfam PF08281 Sigma-70, region 4 119 171 1.2E-11 T 09-03-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS09585 db17bc54123f300b993b6db925cd2deb 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 175 3.3E-24 T 09-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS09585 db17bc54123f300b993b6db925cd2deb 187 SUPERFAMILY SSF88946 23 103 1.1E-20 T 09-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS09585 db17bc54123f300b993b6db925cd2deb 187 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 51 82 - T 09-03-2017 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS09585 db17bc54123f300b993b6db925cd2deb 187 Pfam PF04542 Sigma-70 region 2 29 95 4.4E-17 T 09-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS05240 623be259a8774470da353fe5e6307c16 289 SUPERFAMILY SSF46689 62 109 2.91E-11 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS05240 623be259a8774470da353fe5e6307c16 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 92 108 8.8E-7 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BV404_RS05240 623be259a8774470da353fe5e6307c16 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 77 92 8.8E-7 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BV404_RS05240 623be259a8774470da353fe5e6307c16 289 SMART SM00871 136 287 6.5E-13 T 09-03-2017 IPR010499 Bacterial transcription activator, effector binding BV404_RS05240 623be259a8774470da353fe5e6307c16 289 Gene3D G3DSA:1.10.10.60 62 112 3.6E-17 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS05240 623be259a8774470da353fe5e6307c16 289 SUPERFAMILY SSF55136 206 287 3.49E-16 T 09-03-2017 IPR011256 Regulatory factor, effector binding domain BV404_RS05240 623be259a8774470da353fe5e6307c16 289 SUPERFAMILY SSF46689 9 59 5.38E-11 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS05240 623be259a8774470da353fe5e6307c16 289 Pfam PF12833 Helix-turn-helix domain 31 109 2.0E-22 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BV404_RS05240 623be259a8774470da353fe5e6307c16 289 Gene3D G3DSA:3.20.80.10 135 287 6.0E-16 T 09-03-2017 IPR011256 Regulatory factor, effector binding domain BV404_RS05240 623be259a8774470da353fe5e6307c16 289 Pfam PF06445 GyrI-like small molecule binding domain 169 286 2.4E-13 T 09-03-2017 IPR029442 GyrI-like small molecule binding domain BV404_RS05240 623be259a8774470da353fe5e6307c16 289 Gene3D G3DSA:1.10.10.60 8 61 1.6E-19 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS05240 623be259a8774470da353fe5e6307c16 289 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 62 104 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BV404_RS05240 623be259a8774470da353fe5e6307c16 289 SMART SM00342 25 108 7.7E-30 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BV404_RS08230 964f2410bdb74c599ee90097f713fe6a 337 Gene3D G3DSA:1.10.287.110 282 330 2.7E-11 T 09-03-2017 IPR001623 DnaJ domain BV404_RS08230 964f2410bdb74c599ee90097f713fe6a 337 Gene3D G3DSA:1.25.40.10 31 159 4.7E-25 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BV404_RS08230 964f2410bdb74c599ee90097f713fe6a 337 SMART SM00671 72 107 4.0E-5 T 09-03-2017 IPR006597 Sel1-like repeat BV404_RS08230 964f2410bdb74c599ee90097f713fe6a 337 SMART SM00671 36 71 2.1E-6 T 09-03-2017 IPR006597 Sel1-like repeat BV404_RS08230 964f2410bdb74c599ee90097f713fe6a 337 SUPERFAMILY SSF81901 31 153 1.18E-23 T 09-03-2017 BV404_RS08230 964f2410bdb74c599ee90097f713fe6a 337 Pfam PF08238 Sel1 repeat 38 71 6.1E-5 T 09-03-2017 IPR006597 Sel1-like repeat BV404_RS08230 964f2410bdb74c599ee90097f713fe6a 337 Pfam PF08238 Sel1 repeat 72 102 2.2E-4 T 09-03-2017 IPR006597 Sel1-like repeat BV404_RS08230 964f2410bdb74c599ee90097f713fe6a 337 SUPERFAMILY SSF46565 282 332 4.97E-11 T 09-03-2017 IPR001623 DnaJ domain BV404_RS00060 4abd23d834431c171af840245f9a6625 266 TIGRFAM TIGR00067 glut_race: glutamate racemase 10 228 1.8E-67 T 09-03-2017 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BV404_RS00060 4abd23d834431c171af840245f9a6625 266 SUPERFAMILY SSF53681 112 256 3.92E-33 T 09-03-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BV404_RS00060 4abd23d834431c171af840245f9a6625 266 Pfam PF01177 Asp/Glu/Hydantoin racemase 12 215 2.1E-27 T 09-03-2017 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BV404_RS00060 4abd23d834431c171af840245f9a6625 266 Gene3D G3DSA:3.40.50.1860 9 175 5.0E-45 T 09-03-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BV404_RS00060 4abd23d834431c171af840245f9a6625 266 SUPERFAMILY SSF53681 9 108 1.31E-29 T 09-03-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BV404_RS00060 4abd23d834431c171af840245f9a6625 266 Hamap MF_00258 Glutamate racemase [murI]. 7 254 33.087 T 09-03-2017 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BV404_RS00060 4abd23d834431c171af840245f9a6625 266 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 74 82 - T 09-03-2017 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BV404_RS14895 4abd23d834431c171af840245f9a6625 266 TIGRFAM TIGR00067 glut_race: glutamate racemase 10 228 1.8E-67 T 09-03-2017 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BV404_RS14895 4abd23d834431c171af840245f9a6625 266 SUPERFAMILY SSF53681 112 256 3.92E-33 T 09-03-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BV404_RS14895 4abd23d834431c171af840245f9a6625 266 Pfam PF01177 Asp/Glu/Hydantoin racemase 12 215 2.1E-27 T 09-03-2017 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BV404_RS14895 4abd23d834431c171af840245f9a6625 266 Gene3D G3DSA:3.40.50.1860 9 175 5.0E-45 T 09-03-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BV404_RS14895 4abd23d834431c171af840245f9a6625 266 SUPERFAMILY SSF53681 9 108 1.31E-29 T 09-03-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BV404_RS14895 4abd23d834431c171af840245f9a6625 266 Hamap MF_00258 Glutamate racemase [murI]. 7 254 33.087 T 09-03-2017 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BV404_RS14895 4abd23d834431c171af840245f9a6625 266 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 74 82 - T 09-03-2017 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BV404_RS02800 e9c4fe15db96bf8d1598c233c82959c1 440 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 21 434 1.1E-88 T 09-03-2017 IPR004681 TRAP transporter permease protein GO:0016021 BV404_RS02800 e9c4fe15db96bf8d1598c233c82959c1 440 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 428 1.7E-75 T 09-03-2017 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit BV404_RS02800 e9c4fe15db96bf8d1598c233c82959c1 440 PIRSF PIRSF006066 5 440 1.6E-74 T 09-03-2017 IPR004681 TRAP transporter permease protein GO:0016021 BV404_RS07175 51feb572e570aef1d24f40d54d68342d 475 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 205 260 - T 09-03-2017 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BV404_RS07175 51feb572e570aef1d24f40d54d68342d 475 SUPERFAMILY SSF81442 9 467 9.29E-122 T 09-03-2017 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BV404_RS07175 51feb572e570aef1d24f40d54d68342d 475 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 9 466 4.0E-230 T 09-03-2017 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 BV404_RS07175 51feb572e570aef1d24f40d54d68342d 475 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 15 445 1.4E-114 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BV404_RS07175 51feb572e570aef1d24f40d54d68342d 475 Gene3D G3DSA:1.20.210.10 9 467 9.1E-70 T 09-03-2017 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BV404_RS14425 0872c23b91322501e5bf62b6e7dc9d7d 399 ProSitePatterns PS00216 Sugar transport proteins signature 1. 67 83 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BV404_RS14425 0872c23b91322501e5bf62b6e7dc9d7d 399 Pfam PF07690 Major Facilitator Superfamily 18 354 5.4E-48 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BV404_RS14425 0872c23b91322501e5bf62b6e7dc9d7d 399 SUPERFAMILY SSF103473 11 388 1.31E-58 T 09-03-2017 IPR020846 Major facilitator superfamily domain BV404_RS14425 0872c23b91322501e5bf62b6e7dc9d7d 399 Gene3D G3DSA:1.20.1250.20 212 384 8.7E-8 T 09-03-2017 BV404_RS14425 0872c23b91322501e5bf62b6e7dc9d7d 399 Gene3D G3DSA:1.20.1250.20 13 196 5.5E-33 T 09-03-2017 BV404_RS14425 0872c23b91322501e5bf62b6e7dc9d7d 399 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 11 385 1.4E-69 T 09-03-2017 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 BV404_RS06040 7b7c4697c9a94dd850a2b7f903355a2f 401 PIRSF PIRSF001434 1 391 1.2E-125 T 09-03-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BV404_RS06040 7b7c4697c9a94dd850a2b7f903355a2f 401 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 7 389 1.4E-174 T 09-03-2017 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 BV404_RS06040 7b7c4697c9a94dd850a2b7f903355a2f 401 SUPERFAMILY SSF53383 20 388 5.98E-101 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase BV404_RS06040 7b7c4697c9a94dd850a2b7f903355a2f 401 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 199 213 - T 09-03-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BV404_RS06040 7b7c4697c9a94dd850a2b7f903355a2f 401 Gene3D G3DSA:3.40.640.10 6 255 3.1E-82 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 BV404_RS06040 7b7c4697c9a94dd850a2b7f903355a2f 401 Gene3D G3DSA:3.90.1150.10 256 389 7.9E-37 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 BV404_RS06040 7b7c4697c9a94dd850a2b7f903355a2f 401 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 387 9.7E-118 T 09-03-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BV404_RS00650 ef9352ec001f6816afae27b19f3907fa 188 Gene3D G3DSA:2.40.50.140 130 187 3.7E-29 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS00650 ef9352ec001f6816afae27b19f3907fa 188 Gene3D G3DSA:2.30.30.30 1 65 1.2E-28 T 09-03-2017 IPR014722 Ribosomal protein L2 domain 2 BV404_RS00650 ef9352ec001f6816afae27b19f3907fa 188 Gene3D G3DSA:2.40.50.140 66 129 3.6E-26 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS00650 ef9352ec001f6816afae27b19f3907fa 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 50.308 T 09-03-2017 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 BV404_RS00650 ef9352ec001f6816afae27b19f3907fa 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 3.3E-23 T 09-03-2017 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 BV404_RS00650 ef9352ec001f6816afae27b19f3907fa 188 TIGRFAM TIGR00038 efp: translation elongation factor P 5 187 1.7E-78 T 09-03-2017 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 BV404_RS00650 ef9352ec001f6816afae27b19f3907fa 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 09-03-2017 IPR013852 Translation elongation factor P/YeiP, conserved site BV404_RS00650 ef9352ec001f6816afae27b19f3907fa 188 SMART SM00841 131 186 9.4E-33 T 09-03-2017 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 BV404_RS00650 ef9352ec001f6816afae27b19f3907fa 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 62 9.6E-25 T 09-03-2017 IPR013185 Translation elongation factor, KOW-like BV404_RS00650 ef9352ec001f6816afae27b19f3907fa 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 7.7E-26 T 09-03-2017 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 BV404_RS00650 ef9352ec001f6816afae27b19f3907fa 188 SMART SM01185 69 123 8.5E-26 T 09-03-2017 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 BV404_RS00650 ef9352ec001f6816afae27b19f3907fa 188 SUPERFAMILY SSF50104 2 64 1.65E-20 T 09-03-2017 IPR008991 Translation protein SH3-like domain BV404_RS00650 ef9352ec001f6816afae27b19f3907fa 188 SUPERFAMILY SSF50249 130 187 1.51E-18 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS00650 ef9352ec001f6816afae27b19f3907fa 188 PIRSF PIRSF005901 2 188 1.3E-65 T 09-03-2017 IPR020599 Translation elongation factor P/YeiP BV404_RS00650 ef9352ec001f6816afae27b19f3907fa 188 SUPERFAMILY SSF50249 70 128 9.85E-18 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS10540 be2977f3f3361fb5a8174c44f686ca7f 258 SUPERFAMILY SSF88723 4 164 5.49E-36 T 09-03-2017 IPR029060 PIN domain-like BV404_RS10540 be2977f3f3361fb5a8174c44f686ca7f 258 SMART SM00475 3 254 7.4E-59 T 09-03-2017 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 BV404_RS10540 be2977f3f3361fb5a8174c44f686ca7f 258 Gene3D G3DSA:1.10.150.20 180 238 1.0E-17 T 09-03-2017 BV404_RS10540 be2977f3f3361fb5a8174c44f686ca7f 258 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 165 254 5.9E-22 T 09-03-2017 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 BV404_RS10540 be2977f3f3361fb5a8174c44f686ca7f 258 Hamap MF_01192 Flap endonuclease Xni [xni]. 2 255 45.516 T 09-03-2017 IPR022895 Flap endonuclease Xni GO:0048256 BV404_RS10540 be2977f3f3361fb5a8174c44f686ca7f 258 SMART SM00279 167 202 4.1E-8 T 09-03-2017 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 BV404_RS10540 be2977f3f3361fb5a8174c44f686ca7f 258 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 154 4.4E-30 T 09-03-2017 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 BV404_RS10540 be2977f3f3361fb5a8174c44f686ca7f 258 Gene3D G3DSA:3.40.50.1010 4 179 1.4E-45 T 09-03-2017 IPR029060 PIN domain-like BV404_RS10540 be2977f3f3361fb5a8174c44f686ca7f 258 SUPERFAMILY SSF47807 164 254 3.14E-19 T 09-03-2017 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 BV404_RS12240 18f06ae2505e3d7d224b60321b521118 384 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 380 1.5E-198 T 09-03-2017 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BV404_RS12240 18f06ae2505e3d7d224b60321b521118 384 SUPERFAMILY SSF55973 3 109 1.49E-47 T 09-03-2017 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BV404_RS12240 18f06ae2505e3d7d224b60321b521118 384 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 369 5.5E-69 T 09-03-2017 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BV404_RS12240 18f06ae2505e3d7d224b60321b521118 384 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 7.8E-46 T 09-03-2017 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BV404_RS12240 18f06ae2505e3d7d224b60321b521118 384 SUPERFAMILY SSF55973 111 232 3.73E-52 T 09-03-2017 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BV404_RS12240 18f06ae2505e3d7d224b60321b521118 384 Gene3D G3DSA:3.30.300.10 11 132 7.6E-50 T 09-03-2017 BV404_RS12240 18f06ae2505e3d7d224b60321b521118 384 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 59.296 T 09-03-2017 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BV404_RS12240 18f06ae2505e3d7d224b60321b521118 384 PIRSF PIRSF000497 1 382 3.0E-175 T 09-03-2017 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BV404_RS12240 18f06ae2505e3d7d224b60321b521118 384 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 09-03-2017 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BV404_RS12240 18f06ae2505e3d7d224b60321b521118 384 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 4.0E-43 T 09-03-2017 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BV404_RS12240 18f06ae2505e3d7d224b60321b521118 384 Gene3D G3DSA:3.30.300.10 244 381 2.7E-70 T 09-03-2017 BV404_RS12240 18f06ae2505e3d7d224b60321b521118 384 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 09-03-2017 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BV404_RS12240 18f06ae2505e3d7d224b60321b521118 384 SUPERFAMILY SSF55973 233 382 1.81E-70 T 09-03-2017 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BV404_RS12240 18f06ae2505e3d7d224b60321b521118 384 Gene3D G3DSA:3.30.300.10 133 233 9.3E-44 T 09-03-2017 BV404_RS10975 225369caa12ab770dd1050e6f52a0bad 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 2.7E-57 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 BV404_RS10975 225369caa12ab770dd1050e6f52a0bad 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 2.7E-57 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 BV404_RS10975 225369caa12ab770dd1050e6f52a0bad 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 2.7E-57 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 BV404_RS10975 225369caa12ab770dd1050e6f52a0bad 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 2.7E-57 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 BV404_RS10975 225369caa12ab770dd1050e6f52a0bad 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 2.7E-57 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 BV404_RS10975 225369caa12ab770dd1050e6f52a0bad 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 2.7E-57 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 BV404_RS10975 225369caa12ab770dd1050e6f52a0bad 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 09-03-2017 IPR020583 Inositol monophosphatase, metal-binding site BV404_RS10975 225369caa12ab770dd1050e6f52a0bad 267 Gene3D G3DSA:3.30.540.10 2 151 8.4E-53 T 09-03-2017 BV404_RS10975 225369caa12ab770dd1050e6f52a0bad 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 09-03-2017 IPR020550 Inositol monophosphatase, conserved site GO:0046854 BV404_RS10975 225369caa12ab770dd1050e6f52a0bad 267 Gene3D G3DSA:3.40.190.80 152 259 8.7E-38 T 09-03-2017 BV404_RS10975 225369caa12ab770dd1050e6f52a0bad 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 1.6E-33 T 09-03-2017 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 BV404_RS10975 225369caa12ab770dd1050e6f52a0bad 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 1.6E-33 T 09-03-2017 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 BV404_RS10975 225369caa12ab770dd1050e6f52a0bad 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 1.6E-33 T 09-03-2017 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 BV404_RS10975 225369caa12ab770dd1050e6f52a0bad 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 1.6E-33 T 09-03-2017 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 BV404_RS10975 225369caa12ab770dd1050e6f52a0bad 267 SUPERFAMILY SSF56655 1 259 2.75E-83 T 09-03-2017 BV404_RS10975 225369caa12ab770dd1050e6f52a0bad 267 Pfam PF00459 Inositol monophosphatase family 2 259 3.0E-69 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 BV404_RS03365 f7eb6f6560d26afb6e8da00350ebb4c9 362 Gene3D G3DSA:3.30.160.20 217 291 3.0E-36 T 09-03-2017 IPR014720 Double-stranded RNA-binding domain BV404_RS03365 f7eb6f6560d26afb6e8da00350ebb4c9 362 Pfam PF03462 PCRF domain 13 205 4.8E-76 T 09-03-2017 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 BV404_RS03365 f7eb6f6560d26afb6e8da00350ebb4c9 362 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 09-03-2017 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 BV404_RS03365 f7eb6f6560d26afb6e8da00350ebb4c9 362 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 360 1.8E-169 T 09-03-2017 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 BV404_RS03365 f7eb6f6560d26afb6e8da00350ebb4c9 362 Gene3D G3DSA:1.20.58.410 7 94 2.1E-24 T 09-03-2017 BV404_RS03365 f7eb6f6560d26afb6e8da00350ebb4c9 362 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 40.366 T 09-03-2017 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 BV404_RS03365 f7eb6f6560d26afb6e8da00350ebb4c9 362 SMART SM00937 67 180 9.6E-68 T 09-03-2017 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 BV404_RS03365 f7eb6f6560d26afb6e8da00350ebb4c9 362 Pfam PF00472 RF-1 domain 218 323 1.4E-41 T 09-03-2017 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 BV404_RS03365 f7eb6f6560d26afb6e8da00350ebb4c9 362 SUPERFAMILY SSF75620 12 355 4.58E-136 T 09-03-2017 BV404_RS04195 1f5276e980d334342ce11f034e767bf5 900 Pfam PF00171 Aldehyde dehydrogenase family 5 401 3.9E-24 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 BV404_RS04195 1f5276e980d334342ce11f034e767bf5 900 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 631 659 - T 09-03-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 BV404_RS04195 1f5276e980d334342ce11f034e767bf5 900 Gene3D G3DSA:1.20.1090.10 643 863 6.9E-67 T 09-03-2017 BV404_RS04195 1f5276e980d334342ce11f034e767bf5 900 Gene3D G3DSA:3.40.309.10 226 273 2.3E-26 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 BV404_RS04195 1f5276e980d334342ce11f034e767bf5 900 Gene3D G3DSA:3.40.309.10 309 405 2.3E-26 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 BV404_RS04195 1f5276e980d334342ce11f034e767bf5 900 PIRSF PIRSF000111 1 865 0.0 T 09-03-2017 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00592+1.1.1.1|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00650+1.2.1.10|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7085|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7180|MetaCyc: PWY-7396 BV404_RS04195 1f5276e980d334342ce11f034e767bf5 900 Gene3D G3DSA:3.40.605.10 2 225 4.7E-23 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 BV404_RS04195 1f5276e980d334342ce11f034e767bf5 900 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 719 739 - T 09-03-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 BV404_RS04195 1f5276e980d334342ce11f034e767bf5 900 Gene3D G3DSA:3.40.50.1970 451 642 1.4E-60 T 09-03-2017 BV404_RS04195 1f5276e980d334342ce11f034e767bf5 900 Pfam PF00465 Iron-containing alcohol dehydrogenase 458 849 1.9E-111 T 09-03-2017 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 BV404_RS04195 1f5276e980d334342ce11f034e767bf5 900 SUPERFAMILY SSF56796 452 863 3.4E-114 T 09-03-2017 BV404_RS04195 1f5276e980d334342ce11f034e767bf5 900 SUPERFAMILY SSF53720 6 454 4.32E-82 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 BV404_RS06560 f5c7a3896e8c914e87f92a3eb775bf3a 395 SUPERFAMILY SSF111369 52 265 2.62E-26 T 09-03-2017 BV404_RS06560 f5c7a3896e8c914e87f92a3eb775bf3a 395 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 374 6.4E-52 T 09-03-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 BV404_RS06560 f5c7a3896e8c914e87f92a3eb775bf3a 395 Gene3D G3DSA:2.40.50.100 183 215 2.0E-19 T 09-03-2017 BV404_RS06560 f5c7a3896e8c914e87f92a3eb775bf3a 395 Gene3D G3DSA:2.40.50.100 62 94 2.0E-19 T 09-03-2017 BV404_RS06560 f5c7a3896e8c914e87f92a3eb775bf3a 395 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 49 264 3.4E-18 T 09-03-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BV404_RS06305 a496534e894e40cfad6bb17c7d4694ac 425 Gene3D G3DSA:1.20.1600.10 7 408 1.3E-65 T 09-03-2017 BV404_RS06305 a496534e894e40cfad6bb17c7d4694ac 425 Pfam PF02321 Outer membrane efflux protein 223 405 4.2E-26 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 BV404_RS06305 a496534e894e40cfad6bb17c7d4694ac 425 Pfam PF02321 Outer membrane efflux protein 12 201 4.8E-28 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 BV404_RS06305 a496534e894e40cfad6bb17c7d4694ac 425 SUPERFAMILY SSF56954 11 420 3.66E-85 T 09-03-2017 BV404_RS06305 a496534e894e40cfad6bb17c7d4694ac 425 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 9 420 6.2E-120 T 09-03-2017 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 BV404_RS06535 9af9cc67c98cb554f873f72fe4c35283 466 Gene3D G3DSA:3.30.930.10 109 462 1.5E-111 T 09-03-2017 BV404_RS06535 9af9cc67c98cb554f873f72fe4c35283 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 1.6E-14 T 09-03-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BV404_RS06535 9af9cc67c98cb554f873f72fe4c35283 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 1.6E-14 T 09-03-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BV404_RS06535 9af9cc67c98cb554f873f72fe4c35283 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 1.6E-14 T 09-03-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BV404_RS06535 9af9cc67c98cb554f873f72fe4c35283 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 1.6E-14 T 09-03-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BV404_RS06535 9af9cc67c98cb554f873f72fe4c35283 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 1.8E-80 T 09-03-2017 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BV404_RS06535 9af9cc67c98cb554f873f72fe4c35283 466 SUPERFAMILY SSF50249 15 101 1.35E-16 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS06535 9af9cc67c98cb554f873f72fe4c35283 466 SUPERFAMILY SSF55681 96 464 6.97E-95 T 09-03-2017 BV404_RS06535 9af9cc67c98cb554f873f72fe4c35283 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 3.0E-11 T 09-03-2017 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 BV404_RS06535 9af9cc67c98cb554f873f72fe4c35283 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 45.913 T 09-03-2017 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 BV404_RS06535 9af9cc67c98cb554f873f72fe4c35283 466 Gene3D G3DSA:2.40.50.140 15 103 4.8E-16 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS06535 9af9cc67c98cb554f873f72fe4c35283 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 6.1E-206 T 09-03-2017 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 BV404_RS09075 187dd19e6e8f2f01d02e999bdb18d77c 386 Pfam PF09002 Domain of unknown function (DUF1887) 1 379 1.1E-167 T 09-03-2017 IPR015093 Protein of unknown function DUF1887 BV404_RS09075 187dd19e6e8f2f01d02e999bdb18d77c 386 Gene3D G3DSA:3.40.1350.10 241 382 2.9E-59 T 09-03-2017 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 Reactome: R-HSA-6784531 BV404_RS09075 187dd19e6e8f2f01d02e999bdb18d77c 386 SUPERFAMILY SSF52980 1 382 6.17E-119 T 09-03-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 BV404_RS09075 187dd19e6e8f2f01d02e999bdb18d77c 386 Gene3D G3DSA:1.10.10.680 162 240 3.3E-52 T 09-03-2017 BV404_RS09075 187dd19e6e8f2f01d02e999bdb18d77c 386 Gene3D G3DSA:3.40.50.10770 1 140 1.8E-61 T 09-03-2017 BV404_RS04245 d92b0c33c1ee3f61efe1124ffcd263b3 316 SUPERFAMILY SSF53901 3 315 1.37E-71 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 BV404_RS04245 d92b0c33c1ee3f61efe1124ffcd263b3 316 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 316 8.4E-146 T 09-03-2017 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 BV404_RS04245 d92b0c33c1ee3f61efe1124ffcd263b3 316 Gene3D G3DSA:3.40.47.10 161 315 1.2E-51 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 BV404_RS04245 d92b0c33c1ee3f61efe1124ffcd263b3 316 Gene3D G3DSA:3.40.47.10 1 160 9.4E-69 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 BV404_RS04245 d92b0c33c1ee3f61efe1124ffcd263b3 316 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 316 73.086 T 09-03-2017 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 BV404_RS04245 d92b0c33c1ee3f61efe1124ffcd263b3 316 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 227 315 9.7E-35 T 09-03-2017 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 BV404_RS04245 d92b0c33c1ee3f61efe1124ffcd263b3 316 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 1.9E-31 T 09-03-2017 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 BV404_RS03920 f3e125eb324cd489313f4bdbde630c3c 755 SUPERFAMILY SSF55874 428 611 5.37E-39 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS03920 f3e125eb324cd489313f4bdbde630c3c 755 Gene3D G3DSA:2.40.50.180 637 701 4.3E-12 T 09-03-2017 BV404_RS03920 f3e125eb324cd489313f4bdbde630c3c 755 PRINTS PR00344 Bacterial sensor protein C-terminal signature 515 529 1.4E-11 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS03920 f3e125eb324cd489313f4bdbde630c3c 755 PRINTS PR00344 Bacterial sensor protein C-terminal signature 597 610 1.4E-11 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS03920 f3e125eb324cd489313f4bdbde630c3c 755 PRINTS PR00344 Bacterial sensor protein C-terminal signature 557 567 1.4E-11 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS03920 f3e125eb324cd489313f4bdbde630c3c 755 PRINTS PR00344 Bacterial sensor protein C-terminal signature 573 591 1.4E-11 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS03920 f3e125eb324cd489313f4bdbde630c3c 755 Gene3D G3DSA:1.10.287.560 366 426 8.9E-19 T 09-03-2017 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 BV404_RS03920 f3e125eb324cd489313f4bdbde630c3c 755 SUPERFAMILY SSF50341 612 746 3.14E-29 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 BV404_RS03920 f3e125eb324cd489313f4bdbde630c3c 755 SMART SM00073 6 103 2.8E-18 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 BV404_RS03920 f3e125eb324cd489313f4bdbde630c3c 755 SMART SM01231 365 425 1.7E-17 T 09-03-2017 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 BV404_RS03920 f3e125eb324cd489313f4bdbde630c3c 755 SUPERFAMILY SSF47384 367 426 6.28E-14 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS03920 f3e125eb324cd489313f4bdbde630c3c 755 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 366 425 2.9E-12 T 09-03-2017 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 BV404_RS03920 f3e125eb324cd489313f4bdbde630c3c 755 SMART SM00260 605 746 4.3E-35 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 BV404_RS03920 f3e125eb324cd489313f4bdbde630c3c 755 SMART SM00387 470 613 8.6E-23 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS03920 f3e125eb324cd489313f4bdbde630c3c 755 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 473 612 2.8E-17 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS03920 f3e125eb324cd489313f4bdbde630c3c 755 Gene3D G3DSA:1.20.120.160 4 142 2.3E-39 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 BV404_RS03920 f3e125eb324cd489313f4bdbde630c3c 755 Pfam PF01584 CheW-like domain 619 748 3.9E-22 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 BV404_RS03920 f3e125eb324cd489313f4bdbde630c3c 755 SUPERFAMILY SSF47226 6 127 8.11E-32 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 BV404_RS03920 f3e125eb324cd489313f4bdbde630c3c 755 Gene3D G3DSA:2.30.30.40 613 634 2.3E-21 T 09-03-2017 BV404_RS03920 f3e125eb324cd489313f4bdbde630c3c 755 Gene3D G3DSA:2.30.30.40 702 746 2.3E-21 T 09-03-2017 BV404_RS03920 f3e125eb324cd489313f4bdbde630c3c 755 Gene3D G3DSA:3.30.565.10 428 612 2.8E-37 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS03920 f3e125eb324cd489313f4bdbde630c3c 755 Pfam PF01627 Hpt domain 8 100 5.5E-18 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 BV404_RS04170 16115e73dadaa01c21ab1110040b2356 391 Pfam PF01627 Hpt domain 301 380 2.4E-11 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 BV404_RS04170 16115e73dadaa01c21ab1110040b2356 391 Gene3D G3DSA:1.20.120.160 275 387 6.2E-21 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 BV404_RS04170 16115e73dadaa01c21ab1110040b2356 391 SUPERFAMILY SSF47226 271 379 4.84E-17 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 BV404_RS13925 2ad00b8ebd9d807d993a52ffbdc6d617 88 SUPERFAMILY SSF160272 1 86 9.02E-29 T 09-03-2017 IPR009962 Protein of unknown function DUF1488 BV404_RS13925 2ad00b8ebd9d807d993a52ffbdc6d617 88 Pfam PF07369 Protein of unknown function (DUF1488) 5 85 7.5E-26 T 09-03-2017 IPR009962 Protein of unknown function DUF1488 BV404_RS13925 2ad00b8ebd9d807d993a52ffbdc6d617 88 Gene3D G3DSA:3.30.160.140 1 86 9.2E-35 T 09-03-2017 IPR009962 Protein of unknown function DUF1488 BV404_RS09300 76deaab3f40d3dd1c8f8e8a34ad0fade 222 Gene3D G3DSA:3.40.1130.10 28 194 9.1E-15 T 09-03-2017 BV404_RS09300 76deaab3f40d3dd1c8f8e8a34ad0fade 222 SMART SM00563 38 160 4.5E-24 T 09-03-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 BV404_RS09300 76deaab3f40d3dd1c8f8e8a34ad0fade 222 Pfam PF01553 Acyltransferase 26 157 1.7E-17 T 09-03-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 BV404_RS09300 76deaab3f40d3dd1c8f8e8a34ad0fade 222 SUPERFAMILY SSF69593 11 209 3.14E-26 T 09-03-2017 BV404_RS13475 3e4412f932407c23b321289c680061f3 290 SUPERFAMILY SSF51735 1 287 2.31E-102 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS13475 3e4412f932407c23b321289c680061f3 290 Gene3D G3DSA:3.40.50.720 1 193 2.0E-35 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS13475 3e4412f932407c23b321289c680061f3 290 Pfam PF04321 RmlD substrate binding domain 1 285 2.2E-104 T 09-03-2017 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581 BV404_RS13475 3e4412f932407c23b321289c680061f3 290 Gene3D G3DSA:3.90.25.10 218 279 5.9E-32 T 09-03-2017 BV404_RS13475 3e4412f932407c23b321289c680061f3 290 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 285 7.1E-100 T 09-03-2017 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581 BV404_RS05560 4ff009eda5df8a45de94a54570f5480c 384 Gene3D G3DSA:3.90.1150.10 268 378 1.1E-23 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 BV404_RS05560 4ff009eda5df8a45de94a54570f5480c 384 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 231 240 - T 09-03-2017 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 BV404_RS05560 4ff009eda5df8a45de94a54570f5480c 384 Gene3D G3DSA:3.40.640.10 59 267 5.7E-75 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 BV404_RS05560 4ff009eda5df8a45de94a54570f5480c 384 Pfam PF00155 Aminotransferase class I and II 42 374 2.4E-50 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BV404_RS05560 4ff009eda5df8a45de94a54570f5480c 384 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 21 376 6.8E-132 T 09-03-2017 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 BV404_RS05560 4ff009eda5df8a45de94a54570f5480c 384 SUPERFAMILY SSF53383 5 378 1.97E-94 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase BV404_RS05560 4ff009eda5df8a45de94a54570f5480c 384 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 4 379 45.098 T 09-03-2017 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 BV404_RS00280 27575a2505d1bc8ef077d5ffe097cac3 195 Pfam PF01106 NifU-like domain 114 180 2.9E-19 T 09-03-2017 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 BV404_RS00280 27575a2505d1bc8ef077d5ffe097cac3 195 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 4 195 44.648 T 09-03-2017 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 BV404_RS00280 27575a2505d1bc8ef077d5ffe097cac3 195 Gene3D G3DSA:2.60.300.12 4 100 1.1E-18 T 09-03-2017 IPR000361 FeS cluster biogenesis BV404_RS00280 27575a2505d1bc8ef077d5ffe097cac3 195 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 122 181 2.0E-26 T 09-03-2017 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 BV404_RS00280 27575a2505d1bc8ef077d5ffe097cac3 195 Pfam PF01521 Iron-sulphur cluster biosynthesis 4 101 9.1E-13 T 09-03-2017 IPR000361 FeS cluster biogenesis BV404_RS00280 27575a2505d1bc8ef077d5ffe097cac3 195 SUPERFAMILY SSF89360 4 100 4.9E-22 T 09-03-2017 IPR000361 FeS cluster biogenesis BV404_RS00280 27575a2505d1bc8ef077d5ffe097cac3 195 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 5 195 1.1E-95 T 09-03-2017 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 BV404_RS00280 27575a2505d1bc8ef077d5ffe097cac3 195 SUPERFAMILY SSF117916 98 187 2.4E-22 T 09-03-2017 BV404_RS10170 c5cfa6ec6204e6745e78d39397c9e4e8 1037 Gene3D G3DSA:1.10.3850.10 796 1010 1.0E-64 T 09-03-2017 BV404_RS10170 c5cfa6ec6204e6745e78d39397c9e4e8 1037 Gene3D G3DSA:3.30.2090.10 183 268 4.4E-15 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BV404_RS10170 c5cfa6ec6204e6745e78d39397c9e4e8 1037 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 5.4E-277 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS10170 c5cfa6ec6204e6745e78d39397c9e4e8 1037 Gene3D G3DSA:1.20.1640.10 286 498 1.8E-57 T 09-03-2017 BV404_RS10170 c5cfa6ec6204e6745e78d39397c9e4e8 1037 SUPERFAMILY SSF82866 290 489 8.11E-46 T 09-03-2017 BV404_RS10170 c5cfa6ec6204e6745e78d39397c9e4e8 1037 SUPERFAMILY SSF82693 554 657 6.8E-17 T 09-03-2017 BV404_RS10170 c5cfa6ec6204e6745e78d39397c9e4e8 1037 Gene3D G3DSA:3.30.70.1430 556 653 2.1E-15 T 09-03-2017 BV404_RS10170 c5cfa6ec6204e6745e78d39397c9e4e8 1037 Gene3D G3DSA:3.30.70.1430 40 140 2.5E-29 T 09-03-2017 BV404_RS10170 c5cfa6ec6204e6745e78d39397c9e4e8 1037 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 7.7E-70 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS10170 c5cfa6ec6204e6745e78d39397c9e4e8 1037 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 7.7E-70 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS10170 c5cfa6ec6204e6745e78d39397c9e4e8 1037 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 7.7E-70 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS10170 c5cfa6ec6204e6745e78d39397c9e4e8 1037 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 7.7E-70 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS10170 c5cfa6ec6204e6745e78d39397c9e4e8 1037 PRINTS PR00702 Acriflavin resistance protein family signature 611 625 7.7E-70 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS10170 c5cfa6ec6204e6745e78d39397c9e4e8 1037 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 7.7E-70 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS10170 c5cfa6ec6204e6745e78d39397c9e4e8 1037 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 7.7E-70 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS10170 c5cfa6ec6204e6745e78d39397c9e4e8 1037 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 7.7E-70 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS10170 c5cfa6ec6204e6745e78d39397c9e4e8 1037 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 7.7E-70 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS10170 c5cfa6ec6204e6745e78d39397c9e4e8 1037 SUPERFAMILY SSF82714 183 266 4.05E-13 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BV404_RS10170 c5cfa6ec6204e6745e78d39397c9e4e8 1037 SUPERFAMILY SSF82714 704 788 1.44E-18 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BV404_RS10170 c5cfa6ec6204e6745e78d39397c9e4e8 1037 SUPERFAMILY SSF82693 40 134 1.18E-25 T 09-03-2017 BV404_RS10170 c5cfa6ec6204e6745e78d39397c9e4e8 1037 SUPERFAMILY SSF82866 794 1010 1.18E-49 T 09-03-2017 BV404_RS10170 c5cfa6ec6204e6745e78d39397c9e4e8 1037 SUPERFAMILY SSF82693 139 181 5.75E-19 T 09-03-2017 BV404_RS10170 c5cfa6ec6204e6745e78d39397c9e4e8 1037 SUPERFAMILY SSF82693 268 324 5.75E-19 T 09-03-2017 BV404_RS10170 c5cfa6ec6204e6745e78d39397c9e4e8 1037 Gene3D G3DSA:3.30.2090.10 703 788 1.1E-20 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BV404_RS10655 48c66529d5371d01e2780ae44ee35916 571 Gene3D G3DSA:3.30.930.10 10 234 3.0E-100 T 09-03-2017 BV404_RS10655 48c66529d5371d01e2780ae44ee35916 571 Gene3D G3DSA:3.30.930.10 389 471 3.0E-100 T 09-03-2017 BV404_RS10655 48c66529d5371d01e2780ae44ee35916 571 Pfam PF03129 Anticodon binding domain 475 568 7.8E-24 T 09-03-2017 IPR004154 Anticodon-binding BV404_RS10655 48c66529d5371d01e2780ae44ee35916 571 Gene3D G3DSA:3.40.50.800 472 570 7.6E-36 T 09-03-2017 IPR004154 Anticodon-binding BV404_RS10655 48c66529d5371d01e2780ae44ee35916 571 SUPERFAMILY SSF55826 218 390 4.71E-31 T 09-03-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 BV404_RS10655 48c66529d5371d01e2780ae44ee35916 571 SUPERFAMILY SSF52954 463 569 2.72E-34 T 09-03-2017 IPR004154 Anticodon-binding BV404_RS10655 48c66529d5371d01e2780ae44ee35916 571 PIRSF PIRSF001535 1 571 1.5E-265 T 09-03-2017 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 BV404_RS10655 48c66529d5371d01e2780ae44ee35916 571 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 41.007 T 09-03-2017 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 BV404_RS10655 48c66529d5371d01e2780ae44ee35916 571 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 568 2.9E-248 T 09-03-2017 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 BV404_RS10655 48c66529d5371d01e2780ae44ee35916 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 2.4E-16 T 09-03-2017 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 BV404_RS10655 48c66529d5371d01e2780ae44ee35916 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.4E-16 T 09-03-2017 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 BV404_RS10655 48c66529d5371d01e2780ae44ee35916 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.4E-16 T 09-03-2017 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 BV404_RS10655 48c66529d5371d01e2780ae44ee35916 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 2.4E-16 T 09-03-2017 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 BV404_RS10655 48c66529d5371d01e2780ae44ee35916 571 Gene3D G3DSA:3.90.960.10 251 388 1.6E-31 T 09-03-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 BV404_RS10655 48c66529d5371d01e2780ae44ee35916 571 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 1.2E-40 T 09-03-2017 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BV404_RS10655 48c66529d5371d01e2780ae44ee35916 571 SUPERFAMILY SSF55681 407 478 6.22E-98 T 09-03-2017 BV404_RS10655 48c66529d5371d01e2780ae44ee35916 571 SUPERFAMILY SSF55681 10 237 6.22E-98 T 09-03-2017 BV404_RS10655 48c66529d5371d01e2780ae44ee35916 571 Pfam PF04073 Aminoacyl-tRNA editing domain 257 378 4.0E-25 T 09-03-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 BV404_RS08715 e1470455885f02350f63e813f98065a5 760 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 66 173 2.4E-15 T 09-03-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 BV404_RS08715 e1470455885f02350f63e813f98065a5 760 Pfam PF09317 Domain of unknown function (DUF1974) 455 739 1.8E-110 T 09-03-2017 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 BV404_RS08715 e1470455885f02350f63e813f98065a5 760 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 301 447 5.0E-9 T 09-03-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 BV404_RS08715 e1470455885f02350f63e813f98065a5 760 Gene3D G3DSA:1.20.140.10 291 448 3.1E-22 T 09-03-2017 BV404_RS08715 e1470455885f02350f63e813f98065a5 760 Gene3D G3DSA:2.40.110.10 178 290 1.7E-18 T 09-03-2017 BV404_RS08715 e1470455885f02350f63e813f98065a5 760 Gene3D G3DSA:1.10.540.10 64 171 1.8E-26 T 09-03-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 BV404_RS08715 e1470455885f02350f63e813f98065a5 760 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 178 277 2.1E-9 T 09-03-2017 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 BV404_RS08715 e1470455885f02350f63e813f98065a5 760 SUPERFAMILY SSF47203 301 453 9.02E-21 T 09-03-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 BV404_RS08715 e1470455885f02350f63e813f98065a5 760 SUPERFAMILY SSF56645 62 296 3.01E-46 T 09-03-2017 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 BV404_RS10945 c79798db59a0c84e8d75b1e89d5dc2e4 171 SUPERFAMILY SSF47144 78 170 1.26E-24 T 09-03-2017 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020 BV404_RS10945 c79798db59a0c84e8d75b1e89d5dc2e4 171 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 169 8.1E-42 T 09-03-2017 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 Reactome: R-HSA-1268020 BV404_RS10945 c79798db59a0c84e8d75b1e89d5dc2e4 171 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 170 25.72 T 09-03-2017 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 Reactome: R-HSA-1268020 BV404_RS10945 c79798db59a0c84e8d75b1e89d5dc2e4 171 Pfam PF00226 DnaJ domain 2 70 8.3E-7 T 09-03-2017 IPR001623 DnaJ domain BV404_RS10945 c79798db59a0c84e8d75b1e89d5dc2e4 171 Pfam PF07743 HSCB C-terminal oligomerisation domain 87 163 5.2E-18 T 09-03-2017 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020 BV404_RS10945 c79798db59a0c84e8d75b1e89d5dc2e4 171 Gene3D G3DSA:1.10.287.110 1 73 3.4E-25 T 09-03-2017 IPR001623 DnaJ domain BV404_RS10945 c79798db59a0c84e8d75b1e89d5dc2e4 171 SUPERFAMILY SSF46565 1 74 6.8E-17 T 09-03-2017 IPR001623 DnaJ domain BV404_RS10945 c79798db59a0c84e8d75b1e89d5dc2e4 171 SMART SM00271 1 66 5.0E-8 T 09-03-2017 IPR001623 DnaJ domain BV404_RS10945 c79798db59a0c84e8d75b1e89d5dc2e4 171 Gene3D G3DSA:1.20.1280.20 81 170 8.0E-31 T 09-03-2017 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020 BV404_RS09855 ebc8aebbce7a8cbd5c75f1437b4b6b85 163 Pfam PF02674 Colicin V production protein 4 142 3.0E-35 T 09-03-2017 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 BV404_RS04920 9370208885a7ea979d1fd5c65e23059f 568 SUPERFAMILY SSF111369 130 322 1.29E-12 T 09-03-2017 BV404_RS04920 9370208885a7ea979d1fd5c65e23059f 568 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 109 317 5.0E-76 T 09-03-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BV404_RS04920 9370208885a7ea979d1fd5c65e23059f 568 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 211 390 1.9E-28 T 09-03-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 BV404_RS04920 9370208885a7ea979d1fd5c65e23059f 568 Gene3D G3DSA:2.40.50.100 211 241 8.9E-9 T 09-03-2017 BV404_RS04920 9370208885a7ea979d1fd5c65e23059f 568 Gene3D G3DSA:2.40.50.100 132 160 8.9E-9 T 09-03-2017 BV404_RS04920 9370208885a7ea979d1fd5c65e23059f 568 Pfam PF11604 Copper binding periplasmic protein CusF 497 562 1.6E-18 T 09-03-2017 IPR021647 Copper binding periplasmic protein CusF BV404_RS04920 9370208885a7ea979d1fd5c65e23059f 568 Pfam PF11604 Copper binding periplasmic protein CusF 417 482 5.1E-22 T 09-03-2017 IPR021647 Copper binding periplasmic protein CusF BV404_RS07810 866e936e0606d5a59b177818d6aee014 230 Pfam PF10881 Protein of unknown function (DUF2726) 38 160 5.3E-35 T 09-03-2017 IPR024402 Domain of unknown function DUF2726 BV404_RS07810 866e936e0606d5a59b177818d6aee014 230 PIRSF PIRSF028063 1 221 6.9E-134 T 09-03-2017 IPR014538 Uncharacterised conserved protein, topoisomerase zinc finger BV404_RS07810 866e936e0606d5a59b177818d6aee014 230 Gene3D G3DSA:3.30.65.10 174 212 3.7E-4 T 09-03-2017 BV404_RS11260 19ee8ef257ee1cf6e4a54ef4827e1246 386 SUPERFAMILY SSF55781 26 142 1.7E-14 T 09-03-2017 IPR029016 GAF domain-like BV404_RS11260 19ee8ef257ee1cf6e4a54ef4827e1246 386 Gene3D G3DSA:1.10.3210.10 185 333 2.6E-14 T 09-03-2017 IPR006674 HD domain BV404_RS11260 19ee8ef257ee1cf6e4a54ef4827e1246 386 SUPERFAMILY SSF109604 187 357 2.89E-23 T 09-03-2017 BV404_RS11260 19ee8ef257ee1cf6e4a54ef4827e1246 386 Pfam PF13487 HD domain 243 313 3.9E-15 T 09-03-2017 BV404_RS11260 19ee8ef257ee1cf6e4a54ef4827e1246 386 Gene3D G3DSA:3.30.450.40 36 148 1.3E-10 T 09-03-2017 IPR029016 GAF domain-like BV404_RS08050 9858b1d98a8b6b7ec99ef712801299ab 436 SMART SM00283 230 434 3.7E-22 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 BV404_RS08050 9858b1d98a8b6b7ec99ef712801299ab 436 SUPERFAMILY SSF55785 33 135 1.73E-24 T 09-03-2017 IPR000014 PAS domain BV404_RS08050 9858b1d98a8b6b7ec99ef712801299ab 436 SUPERFAMILY SSF55785 154 253 5.41E-22 T 09-03-2017 IPR000014 PAS domain BV404_RS08050 9858b1d98a8b6b7ec99ef712801299ab 436 Pfam PF08447 PAS fold 46 132 6.9E-14 T 09-03-2017 IPR013655 PAS fold-3 GO:0005515 BV404_RS08050 9858b1d98a8b6b7ec99ef712801299ab 436 Pfam PF08447 PAS fold 167 251 7.8E-14 T 09-03-2017 IPR013655 PAS fold-3 GO:0005515 BV404_RS08050 9858b1d98a8b6b7ec99ef712801299ab 436 Gene3D G3DSA:1.10.287.950 255 433 1.4E-45 T 09-03-2017 BV404_RS08050 9858b1d98a8b6b7ec99ef712801299ab 436 Gene3D G3DSA:3.30.450.20 157 254 5.2E-21 T 09-03-2017 BV404_RS08050 9858b1d98a8b6b7ec99ef712801299ab 436 Gene3D G3DSA:3.30.450.20 34 137 5.7E-24 T 09-03-2017 BV404_RS08050 9858b1d98a8b6b7ec99ef712801299ab 436 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 293 433 4.2E-39 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 BV404_RS08050 9858b1d98a8b6b7ec99ef712801299ab 436 SMART SM00091 143 211 2.7 T 09-03-2017 IPR000014 PAS domain BV404_RS08050 9858b1d98a8b6b7ec99ef712801299ab 436 SMART SM00091 21 94 9.1 T 09-03-2017 IPR000014 PAS domain BV404_RS08050 9858b1d98a8b6b7ec99ef712801299ab 436 SMART SM00086 96 138 8.5E-6 T 09-03-2017 IPR001610 PAC motif BV404_RS08050 9858b1d98a8b6b7ec99ef712801299ab 436 SMART SM00086 216 258 1.9E-5 T 09-03-2017 IPR001610 PAC motif BV404_RS08050 9858b1d98a8b6b7ec99ef712801299ab 436 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 153 260 1.2E-17 T 09-03-2017 IPR000014 PAS domain BV404_RS08050 9858b1d98a8b6b7ec99ef712801299ab 436 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 32 139 4.7E-17 T 09-03-2017 IPR000014 PAS domain BV404_RS08050 9858b1d98a8b6b7ec99ef712801299ab 436 SUPERFAMILY SSF58104 232 434 1.1E-50 T 09-03-2017 BV404_RS06915 2021855ff5e51bd3860baf7ebac080db 282 Pfam PF14743 DNA ligase OB-like domain 215 279 1.4E-28 T 09-03-2017 IPR029319 DNA ligase, OB-like domain BV404_RS06915 2021855ff5e51bd3860baf7ebac080db 282 Gene3D G3DSA:3.30.1490.70 45 52 1.7E-7 T 09-03-2017 BV404_RS06915 2021855ff5e51bd3860baf7ebac080db 282 Gene3D G3DSA:3.30.1490.70 153 185 1.7E-7 T 09-03-2017 BV404_RS06915 2021855ff5e51bd3860baf7ebac080db 282 SUPERFAMILY SSF56091 25 200 4.32E-37 T 09-03-2017 BV404_RS06915 2021855ff5e51bd3860baf7ebac080db 282 ProSitePatterns PS00333 ATP-dependent DNA ligase signature 2. 177 200 - T 09-03-2017 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 BV404_RS06915 2021855ff5e51bd3860baf7ebac080db 282 Pfam PF01068 ATP dependent DNA ligase domain 84 200 7.5E-8 T 09-03-2017 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 BV404_RS06915 2021855ff5e51bd3860baf7ebac080db 282 SUPERFAMILY SSF50249 174 279 5.03E-31 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS06915 2021855ff5e51bd3860baf7ebac080db 282 Gene3D G3DSA:2.40.50.140 186 280 1.4E-36 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS13630 b8276b56718ae3a8ef6e6dd665aeba95 196 SUPERFAMILY SSF46689 6 78 1.5E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS13630 b8276b56718ae3a8ef6e6dd665aeba95 196 Gene3D G3DSA:1.10.357.10 5 191 7.5E-41 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 BV404_RS13630 b8276b56718ae3a8ef6e6dd665aeba95 196 SUPERFAMILY SSF48498 81 191 3.71E-10 T 09-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal BV404_RS13630 b8276b56718ae3a8ef6e6dd665aeba95 196 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 196 40.787 T 09-03-2017 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 BV404_RS13630 b8276b56718ae3a8ef6e6dd665aeba95 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 58 1.2E-10 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BV404_RS04430 a910e53b6af9ccb1411d0c22681dfb2e 435 Pfam PF00425 chorismate binding enzyme 165 417 1.1E-73 T 09-03-2017 IPR015890 Chorismate-utilising enzyme, C-terminal BV404_RS04430 a910e53b6af9ccb1411d0c22681dfb2e 435 SUPERFAMILY SSF56322 30 425 1.01E-100 T 09-03-2017 IPR005801 ADC synthase GO:0009058 BV404_RS04430 a910e53b6af9ccb1411d0c22681dfb2e 435 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 85 424 1.2E-105 T 09-03-2017 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 BV404_RS04430 a910e53b6af9ccb1411d0c22681dfb2e 435 Hamap MF_01935 Isochorismate synthase MenF [menF]. 4 427 38.101 T 09-03-2017 BV404_RS04430 a910e53b6af9ccb1411d0c22681dfb2e 435 Gene3D G3DSA:3.60.120.10 15 425 1.7E-88 T 09-03-2017 IPR005801 ADC synthase GO:0009058 BV404_RS01540 172daa485084db06f6922f2184528d6f 808 SMART SM00091 130 197 4.4E-6 T 09-03-2017 IPR000014 PAS domain BV404_RS01540 172daa485084db06f6922f2184528d6f 808 SUPERFAMILY SSF141868 400 650 5.49E-61 T 09-03-2017 IPR001633 EAL domain BV404_RS01540 172daa485084db06f6922f2184528d6f 808 Gene3D G3DSA:3.30.450.20 126 184 2.3E-7 T 09-03-2017 BV404_RS01540 172daa485084db06f6922f2184528d6f 808 Pfam PF00563 EAL domain 402 636 9.9E-57 T 09-03-2017 IPR001633 EAL domain BV404_RS01540 172daa485084db06f6922f2184528d6f 808 SMART SM00052 394 641 1.2E-49 T 09-03-2017 IPR001633 EAL domain BV404_RS01540 172daa485084db06f6922f2184528d6f 808 SUPERFAMILY SSF54631 678 800 3.3E-9 T 09-03-2017 BV404_RS01540 172daa485084db06f6922f2184528d6f 808 SUPERFAMILY SSF55785 119 180 2.47E-8 T 09-03-2017 IPR000014 PAS domain BV404_RS01540 172daa485084db06f6922f2184528d6f 808 Gene3D G3DSA:3.10.580.10 676 799 6.6E-8 T 09-03-2017 BV404_RS01540 172daa485084db06f6922f2184528d6f 808 Pfam PF00989 PAS fold 132 183 7.6E-7 T 09-03-2017 IPR013767 PAS fold GO:0006355 BV404_RS01540 172daa485084db06f6922f2184528d6f 808 Gene3D G3DSA:3.20.20.450 398 648 2.8E-61 T 09-03-2017 IPR001633 EAL domain BV404_RS10435 c5cd890f354517e7f2879cb36018c408 417 Pfam PF13440 Polysaccharide biosynthesis protein 28 326 4.7E-18 T 09-03-2017 BV404_RS04035 7a75e4a45481433a1f611e61ff7144ae 430 PIRSF PIRSF006066 5 430 1.3E-91 T 09-03-2017 IPR004681 TRAP transporter permease protein GO:0016021 BV404_RS04035 7a75e4a45481433a1f611e61ff7144ae 430 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 23 427 2.1E-92 T 09-03-2017 IPR004681 TRAP transporter permease protein GO:0016021 BV404_RS04035 7a75e4a45481433a1f611e61ff7144ae 430 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 422 3.9E-92 T 09-03-2017 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit BV404_RS14795 077d166d4e1d971a78eb276cf1ba2b63 389 SMART SM00382 184 364 3.5E-10 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS14795 077d166d4e1d971a78eb276cf1ba2b63 389 Pfam PF02881 SRP54-type protein, helical bundle domain 105 166 4.8E-13 T 09-03-2017 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BV404_RS14795 077d166d4e1d971a78eb276cf1ba2b63 389 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 113 385 5.8E-115 T 09-03-2017 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 BV404_RS14795 077d166d4e1d971a78eb276cf1ba2b63 389 Pfam PF00448 SRP54-type protein, GTPase domain 185 385 3.0E-77 T 09-03-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BV404_RS14795 077d166d4e1d971a78eb276cf1ba2b63 389 Gene3D G3DSA:3.40.50.300 182 386 3.5E-81 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS14795 077d166d4e1d971a78eb276cf1ba2b63 389 SUPERFAMILY SSF52540 183 386 1.0E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS14795 077d166d4e1d971a78eb276cf1ba2b63 389 SMART SM00963 90 170 1.8E-25 T 09-03-2017 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BV404_RS14795 077d166d4e1d971a78eb276cf1ba2b63 389 SUPERFAMILY SSF47364 85 164 4.58E-22 T 09-03-2017 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BV404_RS14795 077d166d4e1d971a78eb276cf1ba2b63 389 SMART SM00962 185 386 1.8E-122 T 09-03-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BV404_RS14795 077d166d4e1d971a78eb276cf1ba2b63 389 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 359 372 - T 09-03-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BV404_RS14795 077d166d4e1d971a78eb276cf1ba2b63 389 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 113 386 64.35 T 09-03-2017 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 BV404_RS14795 077d166d4e1d971a78eb276cf1ba2b63 389 Gene3D G3DSA:1.20.120.140 75 166 2.0E-33 T 09-03-2017 BV404_RS06895 564c6c8e1892e9924e0b1070bc8527ca 206 SUPERFAMILY SSF74653 118 195 6.54E-25 T 09-03-2017 BV404_RS06895 564c6c8e1892e9924e0b1070bc8527ca 206 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 127 204 1.7E-19 T 09-03-2017 IPR006260 TonB, C-terminal GO:0006810 BV404_RS06895 564c6c8e1892e9924e0b1070bc8527ca 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 142 160 2.7E-15 T 09-03-2017 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 BV404_RS06895 564c6c8e1892e9924e0b1070bc8527ca 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 121 142 2.7E-15 T 09-03-2017 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 BV404_RS06895 564c6c8e1892e9924e0b1070bc8527ca 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 161 178 2.7E-15 T 09-03-2017 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 BV404_RS06895 564c6c8e1892e9924e0b1070bc8527ca 206 Gene3D G3DSA:3.30.1150.10 126 204 1.5E-10 T 09-03-2017 BV404_RS06895 564c6c8e1892e9924e0b1070bc8527ca 206 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 126 204 2.3E-21 T 09-03-2017 IPR006260 TonB, C-terminal GO:0006810 BV404_RS03880 67ff2d494f20b17e1d6d0f6e83fcb3da 926 SUPERFAMILY SSF63411 704 914 3.67E-45 T 09-03-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BV404_RS03880 67ff2d494f20b17e1d6d0f6e83fcb3da 926 Gene3D G3DSA:3.30.830.10 472 707 1.4E-67 T 09-03-2017 IPR011237 Peptidase M16 domain GO:0046872 BV404_RS03880 67ff2d494f20b17e1d6d0f6e83fcb3da 926 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 42 65 - T 09-03-2017 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 BV404_RS03880 67ff2d494f20b17e1d6d0f6e83fcb3da 926 SUPERFAMILY SSF63411 4 227 7.7E-59 T 09-03-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BV404_RS03880 67ff2d494f20b17e1d6d0f6e83fcb3da 926 Pfam PF16187 Middle or third domain of peptidase_M16 366 645 1.2E-82 T 09-03-2017 IPR032632 Peptidase M16, middle/third domain BV404_RS03880 67ff2d494f20b17e1d6d0f6e83fcb3da 926 Pfam PF05193 Peptidase M16 inactive domain 649 825 1.2E-9 T 09-03-2017 IPR007863 Peptidase M16, C-terminal BV404_RS03880 67ff2d494f20b17e1d6d0f6e83fcb3da 926 Pfam PF05193 Peptidase M16 inactive domain 182 354 7.8E-26 T 09-03-2017 IPR007863 Peptidase M16, C-terminal BV404_RS03880 67ff2d494f20b17e1d6d0f6e83fcb3da 926 SUPERFAMILY SSF63411 470 695 1.24E-59 T 09-03-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BV404_RS03880 67ff2d494f20b17e1d6d0f6e83fcb3da 926 Pfam PF00675 Insulinase (Peptidase family M16) 21 158 3.5E-38 T 09-03-2017 IPR011765 Peptidase M16, N-terminal BV404_RS03880 67ff2d494f20b17e1d6d0f6e83fcb3da 926 SUPERFAMILY SSF63411 232 468 2.2E-74 T 09-03-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BV404_RS03880 67ff2d494f20b17e1d6d0f6e83fcb3da 926 Gene3D G3DSA:3.30.830.10 240 471 1.7E-73 T 09-03-2017 IPR011237 Peptidase M16 domain GO:0046872 BV404_RS03880 67ff2d494f20b17e1d6d0f6e83fcb3da 926 Gene3D G3DSA:3.30.830.10 4 230 2.7E-72 T 09-03-2017 IPR011237 Peptidase M16 domain GO:0046872 BV404_RS03880 67ff2d494f20b17e1d6d0f6e83fcb3da 926 Gene3D G3DSA:3.30.830.10 708 923 1.6E-48 T 09-03-2017 IPR011237 Peptidase M16 domain GO:0046872 BV404_RS07075 b1a26866160fb2df1e70f10f2ea919f1 406 Pfam PF00909 Ammonium Transporter Family 23 399 1.1E-90 T 09-03-2017 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 BV404_RS07075 b1a26866160fb2df1e70f10f2ea919f1 406 ProSitePatterns PS01219 Ammonium transporters signature. 167 192 - T 09-03-2017 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 BV404_RS07075 b1a26866160fb2df1e70f10f2ea919f1 406 Gene3D G3DSA:1.10.3430.10 15 384 2.0E-97 T 09-03-2017 IPR029020 Ammonium/urea transporter BV404_RS07075 b1a26866160fb2df1e70f10f2ea919f1 406 SUPERFAMILY SSF111352 17 384 3.27E-98 T 09-03-2017 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 BV404_RS03755 cf82d707c2a742611599e3ade7685d2a 179 Pfam PF03925 SeqA protein C-terminal domain 70 177 8.1E-46 T 09-03-2017 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 BV404_RS03755 cf82d707c2a742611599e3ade7685d2a 179 SUPERFAMILY SSF82808 65 178 7.06E-48 T 09-03-2017 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 BV404_RS03755 cf82d707c2a742611599e3ade7685d2a 179 PIRSF PIRSF019401 1 179 1.5E-53 T 09-03-2017 IPR005621 Negative modulator of initiation of replicationr SeqA GO:0003677|GO:0032297 BV404_RS03755 cf82d707c2a742611599e3ade7685d2a 179 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 179 41.276 T 09-03-2017 IPR005621 Negative modulator of initiation of replicationr SeqA GO:0003677|GO:0032297 BV404_RS03755 cf82d707c2a742611599e3ade7685d2a 179 Gene3D G3DSA:1.20.1380.10 68 179 1.5E-50 T 09-03-2017 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 BV404_RS03755 cf82d707c2a742611599e3ade7685d2a 179 SUPERFAMILY SSF47598 1 34 7.78E-13 T 09-03-2017 IPR010985 Ribbon-helix-helix GO:0006355 BV404_RS03755 cf82d707c2a742611599e3ade7685d2a 179 Gene3D G3DSA:1.10.1220.10 1 39 9.5E-25 T 09-03-2017 IPR013321 Arc-type ribbon-helix-helix GO:0006355 BV404_RS07100 4c8864ac969d3745b001a35b48c55625 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 283 2.2E-18 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS07100 4c8864ac969d3745b001a35b48c55625 286 Gene3D G3DSA:1.10.3720.10 7 272 4.3E-49 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS07100 4c8864ac969d3745b001a35b48c55625 286 SUPERFAMILY SSF161098 10 275 1.59E-54 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS07730 053aaed02d8a476a3589fc87a82dad9f 323 Pfam PF01699 Sodium/calcium exchanger protein 4 143 5.5E-22 T 09-03-2017 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 BV404_RS07730 053aaed02d8a476a3589fc87a82dad9f 323 Pfam PF01699 Sodium/calcium exchanger protein 174 318 8.6E-32 T 09-03-2017 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 BV404_RS07730 053aaed02d8a476a3589fc87a82dad9f 323 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 2 313 3.8E-70 T 09-03-2017 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 BV404_RS10015 bc6505017bb9131554a8376f1e4da46d 345 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 156 167 1.1E-6 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 BV404_RS10015 bc6505017bb9131554a8376f1e4da46d 345 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 337 345 1.1E-6 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 BV404_RS10015 bc6505017bb9131554a8376f1e4da46d 345 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 99 109 1.1E-6 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 BV404_RS10015 bc6505017bb9131554a8376f1e4da46d 345 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 58 69 1.1E-6 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 BV404_RS10015 bc6505017bb9131554a8376f1e4da46d 345 Pfam PF13609 Gram-negative porin 12 302 5.0E-33 T 09-03-2017 BV404_RS10015 bc6505017bb9131554a8376f1e4da46d 345 SUPERFAMILY SSF56935 36 345 2.72E-40 T 09-03-2017 BV404_RS10015 bc6505017bb9131554a8376f1e4da46d 345 PRINTS PR00184 Neisseria sp. porin signature 97 116 4.9E-10 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 BV404_RS10015 bc6505017bb9131554a8376f1e4da46d 345 PRINTS PR00184 Neisseria sp. porin signature 155 172 4.9E-10 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 BV404_RS10015 bc6505017bb9131554a8376f1e4da46d 345 PRINTS PR00184 Neisseria sp. porin signature 60 85 4.9E-10 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 BV404_RS10015 bc6505017bb9131554a8376f1e4da46d 345 Gene3D G3DSA:2.40.160.10 37 345 3.9E-38 T 09-03-2017 IPR023614 Porin domain BV404_RS03600 d4e82db448ee9b6d0dcba74bf3f20cd9 150 Pfam PF02050 Flagellar FliJ protein 17 140 1.6E-29 T 09-03-2017 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 BV404_RS03600 d4e82db448ee9b6d0dcba74bf3f20cd9 150 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 3 142 7.8E-34 T 09-03-2017 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 BV404_RS05650 274b05ffc295dc105d8dd6dfa23c1f08 313 Gene3D G3DSA:1.10.10.60 271 311 3.5E-11 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS05650 274b05ffc295dc105d8dd6dfa23c1f08 313 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 228 237 - T 09-03-2017 IPR025944 Sigma-54 interaction domain, conserved site BV404_RS05650 274b05ffc295dc105d8dd6dfa23c1f08 313 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 292 312 1.5E-7 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BV404_RS05650 274b05ffc295dc105d8dd6dfa23c1f08 313 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 275 292 1.5E-7 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BV404_RS05650 274b05ffc295dc105d8dd6dfa23c1f08 313 SUPERFAMILY SSF46689 228 311 1.49E-14 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS05650 274b05ffc295dc105d8dd6dfa23c1f08 313 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 104 119 - T 09-03-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BV404_RS05650 274b05ffc295dc105d8dd6dfa23c1f08 313 Gene3D G3DSA:3.40.50.300 16 190 1.5E-50 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS05650 274b05ffc295dc105d8dd6dfa23c1f08 313 SUPERFAMILY SSF52540 17 256 1.75E-63 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS05650 274b05ffc295dc105d8dd6dfa23c1f08 313 Pfam PF00158 Sigma-54 interaction domain 18 184 3.7E-63 T 09-03-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BV404_RS05650 274b05ffc295dc105d8dd6dfa23c1f08 313 SMART SM00382 38 182 1.5E-7 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS05650 274b05ffc295dc105d8dd6dfa23c1f08 313 Pfam PF02954 Bacterial regulatory protein, Fis family 272 309 2.8E-9 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BV404_RS05650 274b05ffc295dc105d8dd6dfa23c1f08 313 Gene3D G3DSA:1.10.8.60 191 264 4.1E-20 T 09-03-2017 BV404_RS04620 d23a6db2a6b60db6a5d5e86d8a943f4c 242 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 240 1.1E-25 T 09-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS04620 d23a6db2a6b60db6a5d5e86d8a943f4c 242 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 28 240 1.3E-74 T 09-03-2017 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 BV404_RS04620 d23a6db2a6b60db6a5d5e86d8a943f4c 242 SUPERFAMILY SSF88659 166 241 1.61E-15 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS04620 d23a6db2a6b60db6a5d5e86d8a943f4c 242 SUPERFAMILY SSF88659 102 165 2.27E-11 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS04620 d23a6db2a6b60db6a5d5e86d8a943f4c 242 Gene3D G3DSA:1.10.10.10 102 149 1.8E-6 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS04620 d23a6db2a6b60db6a5d5e86d8a943f4c 242 Pfam PF04542 Sigma-70 region 2 28 101 8.7E-10 T 09-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS04620 d23a6db2a6b60db6a5d5e86d8a943f4c 242 SUPERFAMILY SSF88946 25 100 3.53E-17 T 09-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS04620 d23a6db2a6b60db6a5d5e86d8a943f4c 242 PRINTS PR00046 Major sigma-70 factor signature 193 205 1.5E-5 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS04620 d23a6db2a6b60db6a5d5e86d8a943f4c 242 PRINTS PR00046 Major sigma-70 factor signature 210 225 1.5E-5 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS04620 d23a6db2a6b60db6a5d5e86d8a943f4c 242 PRINTS PR00046 Major sigma-70 factor signature 225 236 1.5E-5 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS04620 d23a6db2a6b60db6a5d5e86d8a943f4c 242 PRINTS PR00046 Major sigma-70 factor signature 55 68 1.5E-5 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS04620 d23a6db2a6b60db6a5d5e86d8a943f4c 242 Pfam PF04545 Sigma-70, region 4 189 236 1.2E-9 T 09-03-2017 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS04620 d23a6db2a6b60db6a5d5e86d8a943f4c 242 Gene3D G3DSA:1.10.10.10 179 241 6.5E-9 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS04620 d23a6db2a6b60db6a5d5e86d8a943f4c 242 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 210 236 - T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS11270 6aa1a69147ff07cd54a3bc508daccf96 312 Pfam PF00482 Type II secretion system (T2SS), protein F 172 300 8.4E-23 T 09-03-2017 IPR018076 Type II secretion system F domain BV404_RS02920 fddb1f92d1b213954e6102a814149c94 402 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 397 2.9E-160 T 09-03-2017 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 BV404_RS02920 fddb1f92d1b213954e6102a814149c94 402 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 3.1E-37 T 09-03-2017 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 BV404_RS02920 fddb1f92d1b213954e6102a814149c94 402 SUPERFAMILY SSF55347 126 272 1.34E-61 T 09-03-2017 BV404_RS02920 fddb1f92d1b213954e6102a814149c94 402 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 391 2.5E-36 T 09-03-2017 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 BV404_RS02920 fddb1f92d1b213954e6102a814149c94 402 SUPERFAMILY SSF51735 2 150 4.93E-48 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS02920 fddb1f92d1b213954e6102a814149c94 402 Gene3D G3DSA:1.10.1740.10 313 399 1.5E-27 T 09-03-2017 BV404_RS02920 fddb1f92d1b213954e6102a814149c94 402 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 396 45.235 T 09-03-2017 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 BV404_RS02920 fddb1f92d1b213954e6102a814149c94 402 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 5.0E-46 T 09-03-2017 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 BV404_RS02920 fddb1f92d1b213954e6102a814149c94 402 SUPERFAMILY SSF69055 302 398 3.53E-28 T 09-03-2017 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 BV404_RS02920 fddb1f92d1b213954e6102a814149c94 402 Gene3D G3DSA:3.40.50.720 1 150 6.5E-55 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS02920 fddb1f92d1b213954e6102a814149c94 402 PIRSF PIRSF006205 1 401 2.5E-149 T 09-03-2017 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 BV404_RS09965 5f21e50bfcd7dab268fd4945053dc4a4 116 SMART SM00938 6 104 7.9E-6 T 09-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BV404_RS09965 5f21e50bfcd7dab268fd4945053dc4a4 116 Gene3D G3DSA:3.30.70.120 3 102 4.7E-9 T 09-03-2017 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BV404_RS09965 5f21e50bfcd7dab268fd4945053dc4a4 116 SUPERFAMILY SSF54913 1 102 5.56E-21 T 09-03-2017 IPR011322 Nitrogen regulatory PII-like, alpha/beta BV404_RS00240 b58cab00b7f16819820080d22c435462 118 TIGRFAM TIGR01707 gspI: type II secretion system protein I 7 104 2.1E-35 T 09-03-2017 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 BV404_RS00240 b58cab00b7f16819820080d22c435462 118 Gene3D G3DSA:3.30.1300.30 33 118 7.6E-29 T 09-03-2017 BV404_RS00240 b58cab00b7f16819820080d22c435462 118 Pfam PF13633 Prokaryotic N-terminal methylation site 5 31 1.3E-9 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site BV404_RS00240 b58cab00b7f16819820080d22c435462 118 Pfam PF02501 Type II secretion system (T2SS), protein I 41 116 6.8E-22 T 09-03-2017 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 BV404_RS00240 b58cab00b7f16819820080d22c435462 118 SUPERFAMILY SSF54523 38 116 1.37E-22 T 09-03-2017 BV404_RS00240 b58cab00b7f16819820080d22c435462 118 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 24 8.1E-8 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site BV404_RS00240 b58cab00b7f16819820080d22c435462 118 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site BV404_RS02370 f342f604944e37fffafc9ebe468c146d 444 Pfam PF00158 Sigma-54 interaction domain 146 305 2.9E-37 T 09-03-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BV404_RS02370 f342f604944e37fffafc9ebe468c146d 444 Gene3D G3DSA:1.10.10.60 384 438 6.7E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS02370 f342f604944e37fffafc9ebe468c146d 444 Pfam PF02954 Bacterial regulatory protein, Fis family 396 435 8.6E-8 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BV404_RS02370 f342f604944e37fffafc9ebe468c146d 444 Gene3D G3DSA:3.40.50.300 145 311 6.8E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS02370 f342f604944e37fffafc9ebe468c146d 444 Gene3D G3DSA:1.10.8.60 312 383 3.5E-23 T 09-03-2017 BV404_RS02370 f342f604944e37fffafc9ebe468c146d 444 SUPERFAMILY SSF46689 350 438 1.46E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS02370 f342f604944e37fffafc9ebe468c146d 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 09-03-2017 IPR025944 Sigma-54 interaction domain, conserved site BV404_RS02370 f342f604944e37fffafc9ebe468c146d 444 SUPERFAMILY SSF52540 146 376 5.17E-48 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS02370 f342f604944e37fffafc9ebe468c146d 444 SMART SM00382 166 303 2.6E-5 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS02370 f342f604944e37fffafc9ebe468c146d 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 402 419 5.6E-5 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BV404_RS02370 f342f604944e37fffafc9ebe468c146d 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 419 439 5.6E-5 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BV404_RS02370 f342f604944e37fffafc9ebe468c146d 444 SUPERFAMILY SSF52172 27 190 3.48E-6 T 09-03-2017 IPR011006 CheY-like superfamily BV404_RS04820 51809d4f4caf21b7242fc2f18e63f4de 197 Pfam PF03358 NADPH-dependent FMN reductase 1 141 2.9E-23 T 09-03-2017 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 BV404_RS04820 51809d4f4caf21b7242fc2f18e63f4de 197 Gene3D G3DSA:3.40.50.360 1 180 6.2E-26 T 09-03-2017 IPR029039 Flavoprotein-like domain BV404_RS04820 51809d4f4caf21b7242fc2f18e63f4de 197 SUPERFAMILY SSF52218 1 172 6.77E-28 T 09-03-2017 IPR029039 Flavoprotein-like domain BV404_RS10770 f150a49ac37a681d7d8588c7a6e471c3 119 SUPERFAMILY SSF54285 6 82 3.53E-26 T 09-03-2017 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp BV404_RS10770 f150a49ac37a681d7d8588c7a6e471c3 119 Hamap MF_00460 Protein RnfH [rnfH]. 8 98 24.947 T 09-03-2017 IPR005346 RnfH protein BV404_RS10770 f150a49ac37a681d7d8588c7a6e471c3 119 Gene3D G3DSA:3.10.20.280 2 92 7.8E-38 T 09-03-2017 IPR005346 RnfH protein BV404_RS10770 f150a49ac37a681d7d8588c7a6e471c3 119 Pfam PF03658 RnfH family Ubiquitin 8 90 5.2E-34 T 09-03-2017 IPR005346 RnfH protein BV404_RS09395 1cd74a1387546e4d74be119081a7e8f4 220 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 4 219 28.442 T 09-03-2017 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 BV404_RS09395 1cd74a1387546e4d74be119081a7e8f4 220 Gene3D G3DSA:2.160.20.70 101 218 4.4E-39 T 09-03-2017 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 BV404_RS09395 1cd74a1387546e4d74be119081a7e8f4 220 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 102 1.5E-31 T 09-03-2017 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 BV404_RS09395 1cd74a1387546e4d74be119081a7e8f4 220 SUPERFAMILY SSF63848 113 216 1.06E-30 T 09-03-2017 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 BV404_RS09395 1cd74a1387546e4d74be119081a7e8f4 220 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 115 215 3.3E-32 T 09-03-2017 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 BV404_RS09395 1cd74a1387546e4d74be119081a7e8f4 220 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 5 216 1.4E-78 T 09-03-2017 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 BV404_RS05350 89aca625b5eb8c89dc18af475a9f5ba6 461 Pfam PF00501 AMP-binding enzyme 20 293 1.8E-12 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 BV404_RS05350 89aca625b5eb8c89dc18af475a9f5ba6 461 Gene3D G3DSA:3.40.50.980 17 147 8.4E-8 T 09-03-2017 BV404_RS05350 89aca625b5eb8c89dc18af475a9f5ba6 461 Pfam PF13193 AMP-binding enzyme C-terminal domain 361 444 1.4E-6 T 09-03-2017 IPR025110 AMP-binding enzyme C-terminal domain BV404_RS05350 89aca625b5eb8c89dc18af475a9f5ba6 461 SUPERFAMILY SSF56801 19 456 1.96E-53 T 09-03-2017 BV404_RS05350 89aca625b5eb8c89dc18af475a9f5ba6 461 Gene3D G3DSA:3.40.50.980 148 293 9.0E-10 T 09-03-2017 BV404_RS05350 89aca625b5eb8c89dc18af475a9f5ba6 461 Gene3D G3DSA:3.30.300.30 350 456 3.1E-14 T 09-03-2017 BV404_RS05695 06274df399e57acbc4e0a2b46babea48 264 Pfam PF00849 RNA pseudouridylate synthase 89 232 5.1E-14 T 09-03-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BV404_RS05695 06274df399e57acbc4e0a2b46babea48 264 SUPERFAMILY SSF55120 78 263 8.48E-43 T 09-03-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 BV404_RS05695 06274df399e57acbc4e0a2b46babea48 264 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 93 262 2.9E-56 T 09-03-2017 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 BV404_RS05695 06274df399e57acbc4e0a2b46babea48 264 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 124 138 - T 09-03-2017 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 BV404_RS06320 59a973fe16234b9228b3bf79b1af3a01 961 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 34 465 1.6E-157 T 09-03-2017 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761 BV404_RS06320 59a973fe16234b9228b3bf79b1af3a01 961 Pfam PF00202 Aminotransferase class-III 51 464 2.8E-94 T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BV404_RS06320 59a973fe16234b9228b3bf79b1af3a01 961 Gene3D G3DSA:1.20.1650.10 464 561 7.4E-41 T 09-03-2017 BV404_RS06320 59a973fe16234b9228b3bf79b1af3a01 961 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 533 893 3.4E-65 T 09-03-2017 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 BV404_RS06320 59a973fe16234b9228b3bf79b1af3a01 961 Gene3D G3DSA:3.90.1150.10 339 463 8.5E-42 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 BV404_RS06320 59a973fe16234b9228b3bf79b1af3a01 961 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 780 801 - T 09-03-2017 IPR021115 Pyridoxal-phosphate binding site GO:0016831 BV404_RS06320 59a973fe16234b9228b3bf79b1af3a01 961 SUPERFAMILY SSF53383 42 464 1.71E-112 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase BV404_RS06320 59a973fe16234b9228b3bf79b1af3a01 961 Gene3D G3DSA:3.90.1150.10 846 959 1.8E-40 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 BV404_RS06320 59a973fe16234b9228b3bf79b1af3a01 961 Gene3D G3DSA:3.40.640.10 572 845 6.3E-89 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 BV404_RS06320 59a973fe16234b9228b3bf79b1af3a01 961 Gene3D G3DSA:3.40.640.10 88 338 3.3E-66 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 BV404_RS06320 59a973fe16234b9228b3bf79b1af3a01 961 SUPERFAMILY SSF53383 513 959 1.2E-111 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase BV404_RS14015 9b969ebe3c7b9b663f0cf47f401278f1 88 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 5.4E-45 T 09-03-2017 IPR009383 Protein of unknown function DUF1040 BV404_RS14015 9b969ebe3c7b9b663f0cf47f401278f1 88 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 2.0E-35 T 09-03-2017 IPR009383 Protein of unknown function DUF1040 BV404_RS09330 829049f752a166c869ab887b450b0fff 754 SUPERFAMILY SSF56235 7 158 8.75E-104 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal BV404_RS09330 829049f752a166c869ab887b450b0fff 754 SUPERFAMILY SSF56235 191 746 8.75E-104 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal BV404_RS09330 829049f752a166c869ab887b450b0fff 754 Pfam PF01804 Penicillin amidase 8 741 1.0E-93 T 09-03-2017 IPR002692 Penicillin/cephalosporin acylase GO:0016787|GO:0017000 BV404_RS09330 829049f752a166c869ab887b450b0fff 754 Gene3D G3DSA:1.10.439.10 7 149 1.4E-35 T 09-03-2017 IPR023343 Penicillin amidase type, domain1 GO:0016811 BV404_RS09330 829049f752a166c869ab887b450b0fff 754 Gene3D G3DSA:3.60.20.10 360 583 6.7E-58 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal BV404_RS09330 829049f752a166c869ab887b450b0fff 754 Gene3D G3DSA:3.60.20.10 173 278 6.7E-58 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal BV404_RS09330 829049f752a166c869ab887b450b0fff 754 Gene3D G3DSA:2.30.120.10 285 331 3.2E-4 T 09-03-2017 BV404_RS10215 2c85dc4784e0e95cf7437845b9864100 326 Gene3D G3DSA:3.10.580.10 199 322 6.4E-24 T 09-03-2017 BV404_RS10215 2c85dc4784e0e95cf7437845b9864100 326 SUPERFAMILY SSF53697 20 276 5.34E-48 T 09-03-2017 BV404_RS10215 2c85dc4784e0e95cf7437845b9864100 326 Pfam PF00571 CBS domain 216 260 4.7E-5 T 09-03-2017 IPR000644 CBS domain BV404_RS10215 2c85dc4784e0e95cf7437845b9864100 326 PIRSF PIRSF004692 1 326 7.4E-104 T 09-03-2017 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 BV404_RS10215 2c85dc4784e0e95cf7437845b9864100 326 Pfam PF01380 SIS domain 45 174 2.5E-29 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 BV404_RS10215 2c85dc4784e0e95cf7437845b9864100 326 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 48 316 2.2E-85 T 09-03-2017 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 BV404_RS10215 2c85dc4784e0e95cf7437845b9864100 326 Gene3D G3DSA:3.40.50.10490 15 198 3.5E-39 T 09-03-2017 BV404_RS08505 7e2f0293b9e093692bdfcdf20c23f70a 181 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 177 3.1E-63 T 09-03-2017 IPR006008 Intracellular septation protein A GO:0016021 BV404_RS08505 7e2f0293b9e093692bdfcdf20c23f70a 181 Pfam PF04279 Intracellular septation protein A 1 174 1.1E-67 T 09-03-2017 IPR006008 Intracellular septation protein A GO:0016021 BV404_RS08505 7e2f0293b9e093692bdfcdf20c23f70a 181 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 175 18.507 T 09-03-2017 IPR006008 Intracellular septation protein A GO:0016021 BV404_RS13495 fb4b9b8d07f89d3165038c09feed6448 321 SUPERFAMILY SSF64182 4 319 4.19E-41 T 09-03-2017 BV404_RS07895 f94e75c66b220c35595767156749f347 76 SUPERFAMILY SSF52833 3 69 1.46E-14 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS07895 f94e75c66b220c35595767156749f347 76 Gene3D G3DSA:3.40.30.10 3 74 1.5E-19 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS07895 f94e75c66b220c35595767156749f347 76 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 09-03-2017 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 BV404_RS07895 f94e75c66b220c35595767156749f347 76 Pfam PF00462 Glutaredoxin 4 60 5.8E-13 T 09-03-2017 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 BV404_RS13780 160b0f8d1da18f166dc73a55f4f040ea 383 SUPERFAMILY SSF111369 56 297 2.48E-79 T 09-03-2017 BV404_RS13780 160b0f8d1da18f166dc73a55f4f040ea 383 Pfam PF00529 HlyD membrane-fusion protein of T1SS 150 359 1.9E-8 T 09-03-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 BV404_RS13780 160b0f8d1da18f166dc73a55f4f040ea 383 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 374 5.2E-89 T 09-03-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 BV404_RS13780 160b0f8d1da18f166dc73a55f4f040ea 383 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 66 292 5.2E-15 T 09-03-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BV404_RS13780 160b0f8d1da18f166dc73a55f4f040ea 383 Gene3D G3DSA:2.40.50.100 176 211 8.9E-26 T 09-03-2017 BV404_RS13780 160b0f8d1da18f166dc73a55f4f040ea 383 Gene3D G3DSA:2.40.50.100 68 101 8.9E-26 T 09-03-2017 BV404_RS06615 d33850844dcf82ee1e30badc23e7b096 514 SUPERFAMILY SSF55021 1 68 8.14E-7 T 09-03-2017 BV404_RS06615 d33850844dcf82ee1e30badc23e7b096 514 Gene3D G3DSA:3.30.70.260 1 68 7.6E-7 T 09-03-2017 BV404_RS06615 d33850844dcf82ee1e30badc23e7b096 514 SUPERFAMILY SSF52540 205 445 6.35E-63 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS06615 d33850844dcf82ee1e30badc23e7b096 514 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 290 305 - T 09-03-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BV404_RS06615 d33850844dcf82ee1e30badc23e7b096 514 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 417 426 - T 09-03-2017 IPR025944 Sigma-54 interaction domain, conserved site BV404_RS06615 d33850844dcf82ee1e30badc23e7b096 514 Pfam PF00158 Sigma-54 interaction domain 206 370 3.3E-57 T 09-03-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BV404_RS06615 d33850844dcf82ee1e30badc23e7b096 514 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 229 242 - T 09-03-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BV404_RS06615 d33850844dcf82ee1e30badc23e7b096 514 SUPERFAMILY SSF55785 83 169 1.03E-9 T 09-03-2017 IPR000014 PAS domain BV404_RS06615 d33850844dcf82ee1e30badc23e7b096 514 Gene3D G3DSA:3.30.450.20 79 169 2.2E-9 T 09-03-2017 BV404_RS06615 d33850844dcf82ee1e30badc23e7b096 514 SMART SM00382 225 368 1.7E-10 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS06615 d33850844dcf82ee1e30badc23e7b096 514 SUPERFAMILY SSF46689 458 512 1.61E-8 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS06615 d33850844dcf82ee1e30badc23e7b096 514 Pfam PF00989 PAS fold 84 130 5.0E-5 T 09-03-2017 IPR013767 PAS fold GO:0006355 BV404_RS06615 d33850844dcf82ee1e30badc23e7b096 514 Gene3D G3DSA:3.40.50.300 202 376 4.8E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS06615 d33850844dcf82ee1e30badc23e7b096 514 SMART SM00091 80 146 1.4E-5 T 09-03-2017 IPR000014 PAS domain BV404_RS06615 d33850844dcf82ee1e30badc23e7b096 514 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 465 513 8.7E-28 T 09-03-2017 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 BV404_RS06615 d33850844dcf82ee1e30badc23e7b096 514 Gene3D G3DSA:1.10.10.60 458 512 4.3E-25 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS06615 d33850844dcf82ee1e30badc23e7b096 514 Gene3D G3DSA:1.10.8.60 377 449 5.5E-18 T 09-03-2017 BV404_RS16155 969c307bbd3a08c3327d6d0649512a09 116 Pfam PF00702 haloacid dehalogenase-like hydrolase 2 115 9.9E-7 T 09-03-2017 BV404_RS16155 969c307bbd3a08c3327d6d0649512a09 116 Gene3D G3DSA:3.40.50.1000 1 116 1.6E-19 T 09-03-2017 IPR023214 HAD-like domain BV404_RS16155 969c307bbd3a08c3327d6d0649512a09 116 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 78 116 8.0E-6 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 BV404_RS16155 969c307bbd3a08c3327d6d0649512a09 116 SUPERFAMILY SSF56784 1 116 2.03E-18 T 09-03-2017 IPR023214 HAD-like domain BV404_RS14565 e38c7168c25a3d8bc99f9391470153c3 133 Gene3D G3DSA:1.10.287.880 40 73 4.6E-4 T 09-03-2017 BV404_RS14565 e38c7168c25a3d8bc99f9391470153c3 133 Pfam PF02416 mttA/Hcf106 family 4 41 1.6E-5 T 09-03-2017 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 BV404_RS14565 e38c7168c25a3d8bc99f9391470153c3 133 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 3.1E-26 T 09-03-2017 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 BV404_RS14565 e38c7168c25a3d8bc99f9391470153c3 133 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 3.1E-26 T 09-03-2017 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 BV404_RS14565 e38c7168c25a3d8bc99f9391470153c3 133 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 3.1E-26 T 09-03-2017 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 BV404_RS14565 e38c7168c25a3d8bc99f9391470153c3 133 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 133 18.409 T 09-03-2017 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 BV404_RS14565 e38c7168c25a3d8bc99f9391470153c3 133 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 5.4E-34 T 09-03-2017 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 BV404_RS01410 88d57e74f26d805ef14711c276eff98c 367 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 345 5.1E-120 T 09-03-2017 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 BV404_RS01410 88d57e74f26d805ef14711c276eff98c 367 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 344 1.5E-73 T 09-03-2017 IPR005495 Permease LptG/LptF-related GO:0016021 BV404_RS11040 862945d951d7ac8891d9ed9242e73cc1 258 Gene3D G3DSA:3.40.50.300 3 242 3.4E-112 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11040 862945d951d7ac8891d9ed9242e73cc1 258 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 3 229 1.5E-116 T 09-03-2017 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 BV404_RS11040 862945d951d7ac8891d9ed9242e73cc1 258 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 4 229 2.1E-115 T 09-03-2017 IPR022488 Polyphosphate kinase-2-related BV404_RS11040 862945d951d7ac8891d9ed9242e73cc1 258 SUPERFAMILY SSF52540 35 223 1.28E-32 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11040 862945d951d7ac8891d9ed9242e73cc1 258 PIRSF PIRSF028756 1 258 2.3E-134 T 09-03-2017 IPR016898 Polyphosphate kinase 2 BV404_RS21700 9daf5aab6d5cd81780c7708ad7ff1610 284 SUPERFAMILY SSF50331 209 283 4.82E-14 T 09-03-2017 IPR008995 Molybdate/tungstate binding, C-terminal BV404_RS21700 9daf5aab6d5cd81780c7708ad7ff1610 284 Pfam PF00005 ABC transporter 1 134 6.1E-30 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS21700 9daf5aab6d5cd81780c7708ad7ff1610 284 SUPERFAMILY SSF52540 2 215 3.08E-79 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS21700 9daf5aab6d5cd81780c7708ad7ff1610 284 SMART SM00382 1 184 1.0E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS21700 9daf5aab6d5cd81780c7708ad7ff1610 284 ProSitePatterns PS00211 ABC transporters family signature. 107 121 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS21700 9daf5aab6d5cd81780c7708ad7ff1610 284 Gene3D G3DSA:3.40.50.300 1 208 5.0E-70 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS21700 9daf5aab6d5cd81780c7708ad7ff1610 284 Gene3D G3DSA:2.40.50.140 249 284 1.5E-4 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS02290 ca9a1e9dcb7c92c47eb09b8f8f356476 136 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 5.8E-9 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BV404_RS02290 ca9a1e9dcb7c92c47eb09b8f8f356476 136 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 5.8E-9 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BV404_RS02290 ca9a1e9dcb7c92c47eb09b8f8f356476 136 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 5.8E-9 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BV404_RS02290 ca9a1e9dcb7c92c47eb09b8f8f356476 136 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 5.8E-9 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BV404_RS02290 ca9a1e9dcb7c92c47eb09b8f8f356476 136 SUPERFAMILY SSF46785 3 134 9.6E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS02290 ca9a1e9dcb7c92c47eb09b8f8f356476 136 SMART SM00347 23 124 7.7E-13 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BV404_RS02290 ca9a1e9dcb7c92c47eb09b8f8f356476 136 Gene3D G3DSA:1.10.10.10 8 135 4.7E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS02290 ca9a1e9dcb7c92c47eb09b8f8f356476 136 Pfam PF12802 MarR family 30 88 1.4E-13 T 09-03-2017 BV404_RS04960 c6955941e337d8a893b94410a7ac5f01 124 Gene3D G3DSA:1.10.3830.10 8 122 6.0E-36 T 09-03-2017 BV404_RS04960 c6955941e337d8a893b94410a7ac5f01 124 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 74 85 - T 09-03-2017 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 BV404_RS04960 c6955941e337d8a893b94410a7ac5f01 124 Pfam PF01219 Prokaryotic diacylglycerol kinase 21 121 2.7E-30 T 09-03-2017 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 BV404_RS04085 3404a1d5aa9461aa17334a3aeb83b3a1 289 Pfam PF04909 Amidohydrolase 24 287 3.6E-45 T 09-03-2017 IPR006680 Amidohydrolase-related GO:0016787 BV404_RS04085 3404a1d5aa9461aa17334a3aeb83b3a1 289 SUPERFAMILY SSF51556 20 287 2.21E-77 T 09-03-2017 IPR032466 Metal-dependent hydrolase BV404_RS04085 3404a1d5aa9461aa17334a3aeb83b3a1 289 Gene3D G3DSA:3.20.20.140 3 288 1.1E-100 T 09-03-2017 BV404_RS00910 a268fe35768d3b1dde0b822604219537 211 Gene3D G3DSA:1.25.40.10 64 178 3.1E-19 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BV404_RS00910 a268fe35768d3b1dde0b822604219537 211 SMART SM00671 144 179 31.0 T 09-03-2017 IPR006597 Sel1-like repeat BV404_RS00910 a268fe35768d3b1dde0b822604219537 211 SMART SM00671 72 107 0.017 T 09-03-2017 IPR006597 Sel1-like repeat BV404_RS00910 a268fe35768d3b1dde0b822604219537 211 SMART SM00671 108 143 2.8E-6 T 09-03-2017 IPR006597 Sel1-like repeat BV404_RS00910 a268fe35768d3b1dde0b822604219537 211 Pfam PF08238 Sel1 repeat 76 106 0.15 T 09-03-2017 IPR006597 Sel1-like repeat BV404_RS00910 a268fe35768d3b1dde0b822604219537 211 Pfam PF08238 Sel1 repeat 149 171 180.0 T 09-03-2017 IPR006597 Sel1-like repeat BV404_RS00910 a268fe35768d3b1dde0b822604219537 211 Pfam PF08238 Sel1 repeat 108 143 1.4E-5 T 09-03-2017 IPR006597 Sel1-like repeat BV404_RS00910 a268fe35768d3b1dde0b822604219537 211 SUPERFAMILY SSF81901 64 176 3.66E-22 T 09-03-2017 BV404_RS05975 620c825b88c00f9de7f82237d83174a6 332 Gene3D G3DSA:1.10.10.60 276 326 5.4E-6 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS05975 620c825b88c00f9de7f82237d83174a6 332 SUPERFAMILY SSF46689 219 324 3.99E-7 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS05975 620c825b88c00f9de7f82237d83174a6 332 Gene3D G3DSA:3.40.50.300 3 176 1.9E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS05975 620c825b88c00f9de7f82237d83174a6 332 Pfam PF00158 Sigma-54 interaction domain 5 168 9.8E-58 T 09-03-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BV404_RS05975 620c825b88c00f9de7f82237d83174a6 332 SUPERFAMILY SSF52540 4 247 7.51E-67 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS05975 620c825b88c00f9de7f82237d83174a6 332 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 5 324 4.6E-160 T 09-03-2017 IPR014317 Transcription activator PspF BV404_RS05975 620c825b88c00f9de7f82237d83174a6 332 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 290 307 6.8E-5 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BV404_RS05975 620c825b88c00f9de7f82237d83174a6 332 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 307 327 6.8E-5 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BV404_RS05975 620c825b88c00f9de7f82237d83174a6 332 Gene3D G3DSA:1.10.8.60 177 248 1.2E-23 T 09-03-2017 BV404_RS05975 620c825b88c00f9de7f82237d83174a6 332 SMART SM00382 25 177 6.0E-10 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS05975 620c825b88c00f9de7f82237d83174a6 332 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 219 228 - T 09-03-2017 IPR025944 Sigma-54 interaction domain, conserved site BV404_RS05975 620c825b88c00f9de7f82237d83174a6 332 Pfam PF02954 Bacterial regulatory protein, Fis family 285 318 7.9E-6 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BV404_RS05975 620c825b88c00f9de7f82237d83174a6 332 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 91 106 - T 09-03-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BV404_RS10650 70c963b68dbe3f8aa18ef65753da23dd 231 SUPERFAMILY SSF118196 2 226 1.44E-76 T 09-03-2017 IPR023370 TsaA-like domain BV404_RS10650 70c963b68dbe3f8aa18ef65753da23dd 231 Gene3D G3DSA:2.40.30.70 3 156 7.9E-49 T 09-03-2017 IPR023370 TsaA-like domain BV404_RS10650 70c963b68dbe3f8aa18ef65753da23dd 231 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 3 145 2.4E-48 T 09-03-2017 IPR023370 TsaA-like domain BV404_RS10650 70c963b68dbe3f8aa18ef65753da23dd 231 Pfam PF01980 Uncharacterised protein family UPF0066 19 141 6.6E-39 T 09-03-2017 IPR023370 TsaA-like domain BV404_RS01055 be3b2beee8d702b3f1134378a3e7e93a 206 SUPERFAMILY SSF55174 3 206 3.93E-72 T 09-03-2017 BV404_RS01055 be3b2beee8d702b3f1134378a3e7e93a 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 2.1E-30 T 09-03-2017 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 BV404_RS01055 be3b2beee8d702b3f1134378a3e7e93a 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.349 T 09-03-2017 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 BV404_RS01055 be3b2beee8d702b3f1134378a3e7e93a 206 Gene3D G3DSA:3.10.290.10 102 190 2.2E-31 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 BV404_RS01055 be3b2beee8d702b3f1134378a3e7e93a 206 SMART SM00363 96 160 1.3E-19 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 BV404_RS01055 be3b2beee8d702b3f1134378a3e7e93a 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 3.9E-85 T 09-03-2017 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 BV404_RS01055 be3b2beee8d702b3f1134378a3e7e93a 206 SMART SM01390 3 95 6.9E-50 T 09-03-2017 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 BV404_RS01055 be3b2beee8d702b3f1134378a3e7e93a 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 09-03-2017 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS01055 be3b2beee8d702b3f1134378a3e7e93a 206 Gene3D G3DSA:1.10.1050.10 1 101 5.7E-41 T 09-03-2017 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 BV404_RS01055 be3b2beee8d702b3f1134378a3e7e93a 206 Pfam PF01479 S4 domain 97 143 4.7E-18 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 BV404_RS14005 55acac88d3b202778a280b532f95a3f2 214 Pfam PF03006 Haemolysin-III related 6 204 3.3E-39 T 09-03-2017 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 BV404_RS14005 55acac88d3b202778a280b532f95a3f2 214 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 10 211 1.4E-71 T 09-03-2017 IPR005744 Hly-III GO:0016021|GO:0019835 BV404_RS07960 c1601bee1eda81a661306f20254e5322 342 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 53 329 1.8E-67 T 09-03-2017 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 BV404_RS07960 c1601bee1eda81a661306f20254e5322 342 Gene3D G3DSA:3.40.630.10 49 231 3.8E-12 T 09-03-2017 BV404_RS07960 c1601bee1eda81a661306f20254e5322 342 SUPERFAMILY SSF53187 9 329 3.31E-76 T 09-03-2017 BV404_RS07960 c1601bee1eda81a661306f20254e5322 342 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 342 127.182 T 09-03-2017 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 BV404_RS07960 c1601bee1eda81a661306f20254e5322 342 PIRSF PIRSF017020 4 336 2.4E-119 T 09-03-2017 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 BV404_RS07590 6ec7ca44629a728e8cd146ff80e64f73 815 Gene3D G3DSA:3.40.228.10 184 392 2.1E-56 T 09-03-2017 BV404_RS07590 6ec7ca44629a728e8cd146ff80e64f73 815 Gene3D G3DSA:3.90.55.10 500 606 7.8E-31 T 09-03-2017 BV404_RS07590 6ec7ca44629a728e8cd146ff80e64f73 815 Pfam PF01568 Molydopterin dinucleotide binding domain 675 787 1.9E-25 T 09-03-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 BV404_RS07590 6ec7ca44629a728e8cd146ff80e64f73 815 Gene3D G3DSA:2.40.40.20 651 808 1.4E-56 T 09-03-2017 BV404_RS07590 6ec7ca44629a728e8cd146ff80e64f73 815 SUPERFAMILY SSF53706 44 667 6.15E-163 T 09-03-2017 BV404_RS07590 6ec7ca44629a728e8cd146ff80e64f73 815 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 43 813 0.0 T 09-03-2017 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 BV404_RS07590 6ec7ca44629a728e8cd146ff80e64f73 815 Pfam PF00384 Molybdopterin oxidoreductase 86 555 8.5E-100 T 09-03-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BV404_RS07590 6ec7ca44629a728e8cd146ff80e64f73 815 SUPERFAMILY SSF50692 670 813 5.88E-43 T 09-03-2017 IPR009010 Aspartate decarboxylase-like domain BV404_RS07590 6ec7ca44629a728e8cd146ff80e64f73 815 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 498 515 - T 09-03-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 BV404_RS07590 6ec7ca44629a728e8cd146ff80e64f73 815 Gene3D G3DSA:3.40.50.740 393 499 1.3E-45 T 09-03-2017 BV404_RS07590 6ec7ca44629a728e8cd146ff80e64f73 815 Gene3D G3DSA:3.40.50.740 79 180 1.3E-45 T 09-03-2017 BV404_RS07590 6ec7ca44629a728e8cd146ff80e64f73 815 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 32 3.6E-5 T 09-03-2017 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal BV404_RS01795 bb4e1fd759c56e2e94fb3fda9dfd6ab1 545 SUPERFAMILY SSF52317 289 539 4.88E-88 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like BV404_RS01795 bb4e1fd759c56e2e94fb3fda9dfd6ab1 545 Pfam PF00117 Glutamine amidotransferase class-I 301 535 9.5E-63 T 09-03-2017 IPR017926 Glutamine amidotransferase BV404_RS01795 bb4e1fd759c56e2e94fb3fda9dfd6ab1 545 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 1.4E-260 T 09-03-2017 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 BV404_RS01795 bb4e1fd759c56e2e94fb3fda9dfd6ab1 545 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.378 T 09-03-2017 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 BV404_RS01795 bb4e1fd759c56e2e94fb3fda9dfd6ab1 545 Gene3D G3DSA:3.40.50.300 1 280 1.4E-133 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS01795 bb4e1fd759c56e2e94fb3fda9dfd6ab1 545 SUPERFAMILY SSF52540 3 269 6.2E-122 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS01795 bb4e1fd759c56e2e94fb3fda9dfd6ab1 545 Pfam PF06418 CTP synthase N-terminus 5 265 2.6E-125 T 09-03-2017 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 BV404_RS01795 bb4e1fd759c56e2e94fb3fda9dfd6ab1 545 Gene3D G3DSA:3.40.50.880 288 538 4.8E-99 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like BV404_RS04765 db392cbe2049a52e0a85e0eb82e4618c 664 SUPERFAMILY SSF53850 37 219 7.98E-25 T 09-03-2017 BV404_RS04765 db392cbe2049a52e0a85e0eb82e4618c 664 SUPERFAMILY SSF55073 510 647 5.57E-26 T 09-03-2017 IPR029787 Nucleotide cyclase BV404_RS04765 db392cbe2049a52e0a85e0eb82e4618c 664 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 501 648 5.8E-25 T 09-03-2017 IPR000160 GGDEF domain BV404_RS04765 db392cbe2049a52e0a85e0eb82e4618c 664 Gene3D G3DSA:3.40.190.10 354 410 2.0E-4 T 09-03-2017 BV404_RS04765 db392cbe2049a52e0a85e0eb82e4618c 664 Gene3D G3DSA:3.40.190.10 110 159 4.5E-5 T 09-03-2017 BV404_RS04765 db392cbe2049a52e0a85e0eb82e4618c 664 SUPERFAMILY SSF53850 242 464 3.83E-26 T 09-03-2017 BV404_RS04765 db392cbe2049a52e0a85e0eb82e4618c 664 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 219 2.5E-19 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BV404_RS04765 db392cbe2049a52e0a85e0eb82e4618c 664 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 256 452 4.2E-24 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BV404_RS04765 db392cbe2049a52e0a85e0eb82e4618c 664 Gene3D G3DSA:3.30.70.270 506 648 7.5E-30 T 09-03-2017 BV404_RS04765 db392cbe2049a52e0a85e0eb82e4618c 664 Pfam PF00990 Diguanylate cyclase, GGDEF domain 506 647 3.4E-27 T 09-03-2017 IPR000160 GGDEF domain BV404_RS04765 db392cbe2049a52e0a85e0eb82e4618c 664 Gene3D G3DSA:3.40.190.10 181 219 7.2E-11 T 09-03-2017 BV404_RS04765 db392cbe2049a52e0a85e0eb82e4618c 664 Gene3D G3DSA:3.40.190.10 37 95 7.2E-11 T 09-03-2017 BV404_RS04765 db392cbe2049a52e0a85e0eb82e4618c 664 Gene3D G3DSA:3.40.190.10 255 353 1.4E-15 T 09-03-2017 BV404_RS04765 db392cbe2049a52e0a85e0eb82e4618c 664 SMART SM00062 242 467 2.5E-4 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BV404_RS04765 db392cbe2049a52e0a85e0eb82e4618c 664 SMART SM00062 22 223 5.9E-11 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BV404_RS04765 db392cbe2049a52e0a85e0eb82e4618c 664 SMART SM00267 494 654 2.7E-24 T 09-03-2017 IPR000160 GGDEF domain BV404_RS12940 4dd65d97701dc312f7b847ad74d00030 310 Gene3D G3DSA:3.40.50.300 8 174 2.9E-52 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS12940 4dd65d97701dc312f7b847ad74d00030 310 Pfam PF01715 IPP transferase 42 287 1.3E-86 T 09-03-2017 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 BV404_RS12940 4dd65d97701dc312f7b847ad74d00030 310 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 9 295 1.4E-116 T 09-03-2017 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 BV404_RS12940 4dd65d97701dc312f7b847ad74d00030 310 Gene3D G3DSA:1.10.287.890 203 285 1.4E-34 T 09-03-2017 BV404_RS12940 4dd65d97701dc312f7b847ad74d00030 310 SUPERFAMILY SSF52540 10 152 1.6E-18 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS12940 4dd65d97701dc312f7b847ad74d00030 310 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 8 301 30.082 T 09-03-2017 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 BV404_RS07980 8fc9a2133991a2be7244c2d1b15820bd 342 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 1 342 35.794 T 09-03-2017 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 BV404_RS07980 8fc9a2133991a2be7244c2d1b15820bd 342 Gene3D G3DSA:1.10.1610.10 3 60 7.5E-24 T 09-03-2017 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 BV404_RS07980 8fc9a2133991a2be7244c2d1b15820bd 342 SUPERFAMILY SSF52733 2 341 2.35E-110 T 09-03-2017 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 BV404_RS07980 8fc9a2133991a2be7244c2d1b15820bd 342 Pfam PF02277 Phosphoribosyltransferase 2 340 2.2E-124 T 09-03-2017 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 BV404_RS07980 8fc9a2133991a2be7244c2d1b15820bd 342 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 3 340 1.2E-126 T 09-03-2017 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 BV404_RS07980 8fc9a2133991a2be7244c2d1b15820bd 342 Gene3D G3DSA:3.40.50.10210 61 323 1.5E-104 T 09-03-2017 BV404_RS05060 9181b7d85ab34e61e641cee3f4d88ba6 144 Gene3D G3DSA:3.40.630.30 2 132 6.1E-30 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS05060 9181b7d85ab34e61e641cee3f4d88ba6 144 SUPERFAMILY SSF55729 2 134 9.26E-30 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS05060 9181b7d85ab34e61e641cee3f4d88ba6 144 Pfam PF00583 Acetyltransferase (GNAT) family 52 125 1.3E-14 T 09-03-2017 IPR000182 GNAT domain GO:0008080 BV404_RS00870 c7c1a2087c610f1f9b5d2e8667b98e13 157 TIGRFAM TIGR02444 TIGR02444: TIGR02444 family protein 13 119 3.1E-37 T 09-03-2017 IPR012659 Conserved hypothetical protein CHP02444 BV404_RS00870 c7c1a2087c610f1f9b5d2e8667b98e13 157 Pfam PF09523 Protein of unknown function (DUF2390) 15 115 3.4E-28 T 09-03-2017 IPR012659 Conserved hypothetical protein CHP02444 BV404_RS09125 7008fc94c52a3d2ca7d08f2ca71fd5d6 324 Gene3D G3DSA:3.40.190.10 91 183 1.4E-19 T 09-03-2017 BV404_RS09125 7008fc94c52a3d2ca7d08f2ca71fd5d6 324 Gene3D G3DSA:3.40.190.10 184 260 5.5E-29 T 09-03-2017 BV404_RS09125 7008fc94c52a3d2ca7d08f2ca71fd5d6 324 Gene3D G3DSA:1.10.10.10 1 81 5.2E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS09125 7008fc94c52a3d2ca7d08f2ca71fd5d6 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 1.8E-16 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS09125 7008fc94c52a3d2ca7d08f2ca71fd5d6 324 Pfam PF03466 LysR substrate binding domain 91 292 1.5E-37 T 09-03-2017 IPR005119 LysR, substrate-binding BV404_RS09125 7008fc94c52a3d2ca7d08f2ca71fd5d6 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.8E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS09125 7008fc94c52a3d2ca7d08f2ca71fd5d6 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.8E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS09125 7008fc94c52a3d2ca7d08f2ca71fd5d6 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.8E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS09125 7008fc94c52a3d2ca7d08f2ca71fd5d6 324 SUPERFAMILY SSF46785 1 87 1.01E-13 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS09125 7008fc94c52a3d2ca7d08f2ca71fd5d6 324 SUPERFAMILY SSF53850 91 322 3.95E-40 T 09-03-2017 BV404_RS10795 a038d48633bc97cb01db6a09e4782efa 816 Gene3D G3DSA:3.40.50.300 285 349 9.7E-30 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS10795 a038d48633bc97cb01db6a09e4782efa 816 Gene3D G3DSA:3.40.50.300 159 253 9.7E-30 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS10795 a038d48633bc97cb01db6a09e4782efa 816 Pfam PF00271 Helicase conserved C-terminal domain 430 538 7.4E-7 T 09-03-2017 IPR001650 Helicase, C-terminal BV404_RS10795 a038d48633bc97cb01db6a09e4782efa 816 Pfam PF04851 Type III restriction enzyme, res subunit 159 339 2.8E-34 T 09-03-2017 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 BV404_RS10795 a038d48633bc97cb01db6a09e4782efa 816 Pfam PF08463 EcoEI R protein C-terminal 656 812 3.0E-20 T 09-03-2017 IPR013670 EcoEI R protein C-terminal domain GO:0003677|GO:0003824|GO:0006304 BV404_RS10795 a038d48633bc97cb01db6a09e4782efa 816 SMART SM00487 155 373 1.7E-16 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain BV404_RS10795 a038d48633bc97cb01db6a09e4782efa 816 Gene3D G3DSA:3.40.50.300 422 550 1.0E-8 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS10795 a038d48633bc97cb01db6a09e4782efa 816 SUPERFAMILY SSF52540 295 335 2.47E-15 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS10795 a038d48633bc97cb01db6a09e4782efa 816 SUPERFAMILY SSF52540 413 554 2.47E-15 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS10795 a038d48633bc97cb01db6a09e4782efa 816 SUPERFAMILY SSF52540 158 380 1.56E-30 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS10795 a038d48633bc97cb01db6a09e4782efa 816 Pfam PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) 40 115 3.3E-7 T 09-03-2017 IPR029464 Type I restriction enzyme R protein, N-terminal domain BV404_RS02070 5dd562c5277024f749b8ea2b66c1d1be 409 Pfam PF00909 Ammonium Transporter Family 18 402 6.0E-101 T 09-03-2017 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 BV404_RS02070 5dd562c5277024f749b8ea2b66c1d1be 409 Gene3D G3DSA:1.10.3430.10 27 398 4.8E-109 T 09-03-2017 IPR029020 Ammonium/urea transporter BV404_RS02070 5dd562c5277024f749b8ea2b66c1d1be 409 SUPERFAMILY SSF111352 12 383 2.09E-106 T 09-03-2017 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 BV404_RS02070 5dd562c5277024f749b8ea2b66c1d1be 409 ProSitePatterns PS01219 Ammonium transporters signature. 163 188 - T 09-03-2017 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 BV404_RS02070 5dd562c5277024f749b8ea2b66c1d1be 409 TIGRFAM TIGR03644 marine_trans_1: probable ammonium transporter, marine subtype 12 405 7.7E-206 T 09-03-2017 IPR019879 Ammonium transporter, marine subtype BV404_RS08135 0aad65e27787cb6dfd9902c2771b31c0 214 Pfam PF00072 Response regulator receiver domain 4 116 5.3E-32 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS08135 0aad65e27787cb6dfd9902c2771b31c0 214 SMART SM00421 146 203 8.2E-18 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BV404_RS08135 0aad65e27787cb6dfd9902c2771b31c0 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BV404_RS08135 0aad65e27787cb6dfd9902c2771b31c0 214 Gene3D G3DSA:1.10.10.10 123 211 2.9E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS08135 0aad65e27787cb6dfd9902c2771b31c0 214 Gene3D G3DSA:3.40.50.2300 2 122 2.6E-35 T 09-03-2017 BV404_RS08135 0aad65e27787cb6dfd9902c2771b31c0 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 1.3E-19 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BV404_RS08135 0aad65e27787cb6dfd9902c2771b31c0 214 SUPERFAMILY SSF52172 3 132 1.85E-34 T 09-03-2017 IPR011006 CheY-like superfamily BV404_RS08135 0aad65e27787cb6dfd9902c2771b31c0 214 SUPERFAMILY SSF46894 135 210 9.52E-19 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BV404_RS08135 0aad65e27787cb6dfd9902c2771b31c0 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 2.2E-10 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BV404_RS08135 0aad65e27787cb6dfd9902c2771b31c0 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 2.2E-10 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BV404_RS08135 0aad65e27787cb6dfd9902c2771b31c0 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 2.2E-10 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BV404_RS08135 0aad65e27787cb6dfd9902c2771b31c0 214 SMART SM00448 2 115 5.2E-31 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS11400 9864fd6c16bd97bb3295d2406a26eb25 442 SUPERFAMILY SSF52418 73 334 4.19E-89 T 09-03-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BV404_RS11400 9864fd6c16bd97bb3295d2406a26eb25 442 PIRSF PIRSF000478 1 438 4.8E-151 T 09-03-2017 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BV404_RS11400 9864fd6c16bd97bb3295d2406a26eb25 442 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 09-03-2017 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BV404_RS11400 9864fd6c16bd97bb3295d2406a26eb25 442 Hamap MF_01628 Thymidine phosphorylase [deoA]. 1 438 51.355 T 09-03-2017 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 BV404_RS11400 9864fd6c16bd97bb3295d2406a26eb25 442 SMART SM00941 350 424 1.4E-28 T 09-03-2017 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BV404_RS11400 9864fd6c16bd97bb3295d2406a26eb25 442 Pfam PF00591 Glycosyl transferase family, a/b domain 80 309 4.8E-49 T 09-03-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BV404_RS11400 9864fd6c16bd97bb3295d2406a26eb25 442 Gene3D G3DSA:3.40.1030.10 75 338 3.0E-110 T 09-03-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BV404_RS11400 9864fd6c16bd97bb3295d2406a26eb25 442 SUPERFAMILY SSF54680 337 437 5.76E-29 T 09-03-2017 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BV404_RS11400 9864fd6c16bd97bb3295d2406a26eb25 442 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 3 427 1.7E-215 T 09-03-2017 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 BV404_RS11400 9864fd6c16bd97bb3295d2406a26eb25 442 Gene3D G3DSA:3.90.1170.30 339 432 3.2E-33 T 09-03-2017 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BV404_RS11400 9864fd6c16bd97bb3295d2406a26eb25 442 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 423 1.6E-161 T 09-03-2017 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 BV404_RS11400 9864fd6c16bd97bb3295d2406a26eb25 442 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 350 423 1.3E-23 T 09-03-2017 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BV404_RS11400 9864fd6c16bd97bb3295d2406a26eb25 442 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 1.2E-21 T 09-03-2017 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 BV404_RS11400 9864fd6c16bd97bb3295d2406a26eb25 442 SUPERFAMILY SSF47648 2 70 1.13E-21 T 09-03-2017 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 BV404_RS11400 9864fd6c16bd97bb3295d2406a26eb25 442 Gene3D G3DSA:1.20.970.10 2 67 1.1E-29 T 09-03-2017 BV404_RS02345 b1454c364bb1197ee37c7e0c874fd653 415 Gene3D G3DSA:3.40.50.300 2 213 1.8E-74 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS02345 b1454c364bb1197ee37c7e0c874fd653 415 SMART SM00490 260 341 3.7E-30 T 09-03-2017 IPR001650 Helicase, C-terminal BV404_RS02345 b1454c364bb1197ee37c7e0c874fd653 415 Pfam PF00271 Helicase conserved C-terminal domain 234 341 3.2E-31 T 09-03-2017 IPR001650 Helicase, C-terminal BV404_RS02345 b1454c364bb1197ee37c7e0c874fd653 415 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 3 414 50.148 T 09-03-2017 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 BV404_RS02345 b1454c364bb1197ee37c7e0c874fd653 415 Gene3D G3DSA:3.40.50.300 214 372 1.1E-49 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS02345 b1454c364bb1197ee37c7e0c874fd653 415 SMART SM00487 22 222 8.1E-56 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain BV404_RS02345 b1454c364bb1197ee37c7e0c874fd653 415 Pfam PF00270 DEAD/DEAH box helicase 27 195 1.6E-46 T 09-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BV404_RS02345 b1454c364bb1197ee37c7e0c874fd653 415 SUPERFAMILY SSF52540 76 358 4.13E-67 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS02345 b1454c364bb1197ee37c7e0c874fd653 415 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 09-03-2017 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BV404_RS12140 0c5dbf4e29e296e776caba2ccfaae368 168 Gene3D G3DSA:3.10.580.10 22 144 1.4E-10 T 09-03-2017 BV404_RS12140 0c5dbf4e29e296e776caba2ccfaae368 168 SUPERFAMILY SSF54631 22 143 2.02E-18 T 09-03-2017 BV404_RS04010 fdbbb94577fe705d639d6923774c78a3 194 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 190 5.4E-38 T 09-03-2017 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BV404_RS04010 fdbbb94577fe705d639d6923774c78a3 194 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.5E-21 T 09-03-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BV404_RS04010 fdbbb94577fe705d639d6923774c78a3 194 PRINTS PR01703 Manganese superoxide dismutase signature 156 168 1.5E-21 T 09-03-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BV404_RS04010 fdbbb94577fe705d639d6923774c78a3 194 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.5E-21 T 09-03-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BV404_RS04010 fdbbb94577fe705d639d6923774c78a3 194 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 1.5E-21 T 09-03-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BV404_RS04010 fdbbb94577fe705d639d6923774c78a3 194 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 1.5E-21 T 09-03-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BV404_RS04010 fdbbb94577fe705d639d6923774c78a3 194 SUPERFAMILY SSF54719 84 193 2.49E-43 T 09-03-2017 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BV404_RS04010 fdbbb94577fe705d639d6923774c78a3 194 Gene3D G3DSA:1.10.287.990 20 82 1.2E-23 T 09-03-2017 BV404_RS04010 fdbbb94577fe705d639d6923774c78a3 194 PIRSF PIRSF000349 1 194 1.7E-83 T 09-03-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BV404_RS04010 fdbbb94577fe705d639d6923774c78a3 194 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 82 3.6E-34 T 09-03-2017 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BV404_RS04010 fdbbb94577fe705d639d6923774c78a3 194 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 158 165 - T 09-03-2017 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BV404_RS04010 fdbbb94577fe705d639d6923774c78a3 194 SUPERFAMILY SSF46609 1 84 4.06E-35 T 09-03-2017 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BV404_RS08650 7f138a8c881182f498509b94ba0951cd 643 SUPERFAMILY SSF51206 201 311 3.67E-20 T 09-03-2017 IPR018490 Cyclic nucleotide-binding-like BV404_RS08650 7f138a8c881182f498509b94ba0951cd 643 SMART SM00387 529 642 1.7E-27 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS08650 7f138a8c881182f498509b94ba0951cd 643 Gene3D G3DSA:2.60.120.10 202 311 2.7E-18 T 09-03-2017 IPR014710 RmlC-like jelly roll fold BV404_RS08650 7f138a8c881182f498509b94ba0951cd 643 Gene3D G3DSA:3.30.565.10 489 641 7.1E-33 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS08650 7f138a8c881182f498509b94ba0951cd 643 Gene3D G3DSA:1.10.287.130 335 366 1.4E-4 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS08650 7f138a8c881182f498509b94ba0951cd 643 PRINTS PR00344 Bacterial sensor protein C-terminal signature 602 620 1.9E-8 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS08650 7f138a8c881182f498509b94ba0951cd 643 PRINTS PR00344 Bacterial sensor protein C-terminal signature 626 639 1.9E-8 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS08650 7f138a8c881182f498509b94ba0951cd 643 PRINTS PR00344 Bacterial sensor protein C-terminal signature 570 584 1.9E-8 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS08650 7f138a8c881182f498509b94ba0951cd 643 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 532 641 3.4E-20 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS08650 7f138a8c881182f498509b94ba0951cd 643 Gene3D G3DSA:3.40.50.2300 7 126 2.1E-6 T 09-03-2017 BV404_RS08650 7f138a8c881182f498509b94ba0951cd 643 Pfam PF00027 Cyclic nucleotide-binding domain 202 288 8.1E-17 T 09-03-2017 IPR000595 Cyclic nucleotide-binding domain BV404_RS08650 7f138a8c881182f498509b94ba0951cd 643 SUPERFAMILY SSF47384 334 372 1.18E-6 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS08650 7f138a8c881182f498509b94ba0951cd 643 Pfam PF00512 His Kinase A (phospho-acceptor) domain 340 382 5.6E-7 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS08650 7f138a8c881182f498509b94ba0951cd 643 SUPERFAMILY SSF52172 4 144 3.69E-7 T 09-03-2017 IPR011006 CheY-like superfamily BV404_RS08650 7f138a8c881182f498509b94ba0951cd 643 SUPERFAMILY SSF55874 481 640 4.85E-34 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS04500 9eca40a565d9f27dedff834e809a12c2 147 Gene3D G3DSA:1.20.58.300 8 134 9.7E-26 T 09-03-2017 IPR007809 FlgN-like protein GO:0005515|GO:0044780 BV404_RS04500 9eca40a565d9f27dedff834e809a12c2 147 Pfam PF05130 FlgN protein 10 123 3.4E-12 T 09-03-2017 IPR007809 FlgN-like protein GO:0005515|GO:0044780 BV404_RS04500 9eca40a565d9f27dedff834e809a12c2 147 SUPERFAMILY SSF140566 8 134 1.26E-20 T 09-03-2017 IPR007809 FlgN-like protein GO:0005515|GO:0044780 BV404_RS13230 ad3c66f3387181ad93be2cce7c2afb96 617 Gene3D G3DSA:1.20.5.570 590 617 7.5E-18 T 09-03-2017 BV404_RS13230 ad3c66f3387181ad93be2cce7c2afb96 617 SUPERFAMILY SSF143968 323 460 7.19E-53 T 09-03-2017 BV404_RS13230 ad3c66f3387181ad93be2cce7c2afb96 617 SUPERFAMILY SSF50475 3 322 3.81E-124 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 BV404_RS13230 ad3c66f3387181ad93be2cce7c2afb96 617 SUPERFAMILY SSF143968 476 614 8.76E-32 T 09-03-2017 BV404_RS13230 ad3c66f3387181ad93be2cce7c2afb96 617 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 466 566 1.1E-17 T 09-03-2017 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 BV404_RS13230 ad3c66f3387181ad93be2cce7c2afb96 617 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 431 1.7E-162 T 09-03-2017 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 BV404_RS13230 ad3c66f3387181ad93be2cce7c2afb96 617 Gene3D G3DSA:3.40.1670.10 337 453 1.2E-49 T 09-03-2017 BV404_RS13230 ad3c66f3387181ad93be2cce7c2afb96 617 Gene3D G3DSA:3.40.1670.10 480 589 1.8E-29 T 09-03-2017 BV404_RS13230 ad3c66f3387181ad93be2cce7c2afb96 617 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 454 3.3E-166 T 09-03-2017 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 BV404_RS09425 50897beb11b2c901f9ae2d560e985dce 285 Pfam PF12697 Alpha/beta hydrolase family 29 276 2.4E-18 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 BV404_RS09425 50897beb11b2c901f9ae2d560e985dce 285 PRINTS PR00412 Epoxide hydrolase signature 259 281 5.6E-6 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 BV404_RS09425 50897beb11b2c901f9ae2d560e985dce 285 PRINTS PR00412 Epoxide hydrolase signature 101 114 5.6E-6 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 BV404_RS09425 50897beb11b2c901f9ae2d560e985dce 285 PRINTS PR00412 Epoxide hydrolase signature 33 51 5.6E-6 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 BV404_RS09425 50897beb11b2c901f9ae2d560e985dce 285 PRINTS PR00412 Epoxide hydrolase signature 55 70 5.6E-6 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 BV404_RS09425 50897beb11b2c901f9ae2d560e985dce 285 PRINTS PR00412 Epoxide hydrolase signature 115 128 5.6E-6 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 BV404_RS09425 50897beb11b2c901f9ae2d560e985dce 285 Gene3D G3DSA:3.40.50.1820 11 282 7.6E-42 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold BV404_RS09425 50897beb11b2c901f9ae2d560e985dce 285 SUPERFAMILY SSF53474 12 283 1.49E-47 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold BV404_RS00215 7644c51c22842f0731866912c9e95a26 678 PRINTS PR01032 Gene IV protein signature 595 617 1.4E-11 T 09-03-2017 BV404_RS00215 7644c51c22842f0731866912c9e95a26 678 PRINTS PR01032 Gene IV protein signature 542 570 1.4E-11 T 09-03-2017 BV404_RS00215 7644c51c22842f0731866912c9e95a26 678 PRINTS PR01032 Gene IV protein signature 474 497 1.4E-11 T 09-03-2017 BV404_RS00215 7644c51c22842f0731866912c9e95a26 678 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 30 624 6.7E-162 T 09-03-2017 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 BV404_RS00215 7644c51c22842f0731866912c9e95a26 678 Pfam PF00263 Bacterial type II and III secretion system protein 453 615 1.9E-50 T 09-03-2017 IPR004846 Type II/III secretion system GO:0009306 BV404_RS00215 7644c51c22842f0731866912c9e95a26 678 PRINTS PR00811 Bacterial general secretion pathway protein D signature 348 358 7.5E-37 T 09-03-2017 IPR001775 GspD/PilQ family BV404_RS00215 7644c51c22842f0731866912c9e95a26 678 PRINTS PR00811 Bacterial general secretion pathway protein D signature 449 473 7.5E-37 T 09-03-2017 IPR001775 GspD/PilQ family BV404_RS00215 7644c51c22842f0731866912c9e95a26 678 PRINTS PR00811 Bacterial general secretion pathway protein D signature 484 494 7.5E-37 T 09-03-2017 IPR001775 GspD/PilQ family BV404_RS00215 7644c51c22842f0731866912c9e95a26 678 PRINTS PR00811 Bacterial general secretion pathway protein D signature 602 616 7.5E-37 T 09-03-2017 IPR001775 GspD/PilQ family BV404_RS00215 7644c51c22842f0731866912c9e95a26 678 PRINTS PR00811 Bacterial general secretion pathway protein D signature 579 597 7.5E-37 T 09-03-2017 IPR001775 GspD/PilQ family BV404_RS00215 7644c51c22842f0731866912c9e95a26 678 Pfam PF03958 Bacterial type II/III secretion system short domain 126 187 3.0E-8 T 09-03-2017 IPR005644 NolW-like BV404_RS00215 7644c51c22842f0731866912c9e95a26 678 Pfam PF03958 Bacterial type II/III secretion system short domain 192 259 5.5E-16 T 09-03-2017 IPR005644 NolW-like BV404_RS00215 7644c51c22842f0731866912c9e95a26 678 Pfam PF03958 Bacterial type II/III secretion system short domain 267 348 5.2E-18 T 09-03-2017 IPR005644 NolW-like BV404_RS00215 7644c51c22842f0731866912c9e95a26 678 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 560 593 - T 09-03-2017 IPR004845 Type II secretion system GspD, conserved site GO:0008565 BV404_RS06375 63a7d4de440867e0702c46b368e3977b 413 Pfam PF00994 Probable molybdopterin binding domain 5 170 1.7E-31 T 09-03-2017 IPR001453 MoaB/Mog domain BV404_RS06375 63a7d4de440867e0702c46b368e3977b 413 SMART SM00852 5 172 4.1E-31 T 09-03-2017 IPR001453 MoaB/Mog domain BV404_RS06375 63a7d4de440867e0702c46b368e3977b 413 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 2 165 4.3E-26 T 09-03-2017 IPR001453 MoaB/Mog domain BV404_RS06375 63a7d4de440867e0702c46b368e3977b 413 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 412 100.773 T 09-03-2017 IPR008135 Competence-induced protein CinA BV404_RS06375 63a7d4de440867e0702c46b368e3977b 413 SUPERFAMILY SSF53218 2 206 1.7E-36 T 09-03-2017 IPR001453 MoaB/Mog domain BV404_RS06375 63a7d4de440867e0702c46b368e3977b 413 Gene3D G3DSA:3.40.980.10 2 204 9.0E-31 T 09-03-2017 IPR001453 MoaB/Mog domain BV404_RS06375 63a7d4de440867e0702c46b368e3977b 413 PIRSF PIRSF006728 1 392 8.4E-113 T 09-03-2017 IPR008135 Competence-induced protein CinA BV404_RS06375 63a7d4de440867e0702c46b368e3977b 413 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 404 2.0E-78 T 09-03-2017 IPR008135 Competence-induced protein CinA BV404_RS07315 1c4c30e9fa92170a2c23abbc1c0117d3 180 Hamap MF_00906 Cell division protein ZapC [zapC]. 1 177 38.017 T 09-03-2017 IPR009809 Cell division protein ZapC BV404_RS07315 1c4c30e9fa92170a2c23abbc1c0117d3 180 Pfam PF07126 Cell-division protein ZapC 1 168 4.4E-66 T 09-03-2017 IPR009809 Cell division protein ZapC BV404_RS07315 1c4c30e9fa92170a2c23abbc1c0117d3 180 PIRSF PIRSF010252 1 177 8.6E-69 T 09-03-2017 IPR009809 Cell division protein ZapC BV404_RS05540 d83f70fdc2380292172567ba273e31c9 828 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 669 685 - T 09-03-2017 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BV404_RS05540 d83f70fdc2380292172567ba273e31c9 828 Gene3D G3DSA:3.50.50.60 104 306 3.8E-46 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS05540 d83f70fdc2380292172567ba273e31c9 828 SUPERFAMILY SSF51905 3 189 1.97E-41 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS05540 d83f70fdc2380292172567ba273e31c9 828 SUPERFAMILY SSF56014 623 794 4.19E-50 T 09-03-2017 BV404_RS05540 d83f70fdc2380292172567ba273e31c9 828 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 622 759 2.5E-19 T 09-03-2017 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BV404_RS05540 d83f70fdc2380292172567ba273e31c9 828 Gene3D G3DSA:3.30.413.10 622 760 1.9E-35 T 09-03-2017 BV404_RS05540 d83f70fdc2380292172567ba273e31c9 828 SUPERFAMILY SSF55124 492 631 2.13E-26 T 09-03-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BV404_RS05540 d83f70fdc2380292172567ba273e31c9 828 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 145 170 5.1E-9 T 09-03-2017 BV404_RS05540 d83f70fdc2380292172567ba273e31c9 828 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 232 246 5.1E-9 T 09-03-2017 BV404_RS05540 d83f70fdc2380292172567ba273e31c9 828 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 273 280 5.1E-9 T 09-03-2017 BV404_RS05540 d83f70fdc2380292172567ba273e31c9 828 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 5.1E-9 T 09-03-2017 BV404_RS05540 d83f70fdc2380292172567ba273e31c9 828 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 4 790 0.0 T 09-03-2017 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 BV404_RS05540 d83f70fdc2380292172567ba273e31c9 828 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 550 611 5.2E-12 T 09-03-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BV404_RS05540 d83f70fdc2380292172567ba273e31c9 828 PRINTS PR00397 Sirohaem Fe-binding site signature 626 644 8.5E-7 T 09-03-2017 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BV404_RS05540 d83f70fdc2380292172567ba273e31c9 828 PRINTS PR00397 Sirohaem Fe-binding site signature 669 687 8.5E-7 T 09-03-2017 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BV404_RS05540 d83f70fdc2380292172567ba273e31c9 828 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 286 1.5E-50 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS05540 d83f70fdc2380292172567ba273e31c9 828 Gene3D G3DSA:3.50.50.60 2 103 1.6E-25 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS05540 d83f70fdc2380292172567ba273e31c9 828 PIRSF PIRSF037149 1 825 0.0 T 09-03-2017 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 BV404_RS05540 d83f70fdc2380292172567ba273e31c9 828 Pfam PF04324 BFD-like [2Fe-2S] binding domain 413 461 1.4E-14 T 09-03-2017 IPR007419 BFD-like [2Fe-2S]-binding domain BV404_RS05540 d83f70fdc2380292172567ba273e31c9 828 SUPERFAMILY SSF51905 147 306 7.67E-25 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS05540 d83f70fdc2380292172567ba273e31c9 828 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 280 1.4E-17 T 09-03-2017 BV404_RS05540 d83f70fdc2380292172567ba273e31c9 828 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 163 1.4E-17 T 09-03-2017 BV404_RS05540 d83f70fdc2380292172567ba273e31c9 828 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.4E-17 T 09-03-2017 BV404_RS05540 d83f70fdc2380292172567ba273e31c9 828 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 231 247 1.4E-17 T 09-03-2017 BV404_RS05540 d83f70fdc2380292172567ba273e31c9 828 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 1.4E-17 T 09-03-2017 BV404_RS09900 c61835d6976bf752170ddfdf4d36aec2 404 ProSitePatterns PS01125 ROK family signature. 217 244 - T 09-03-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BV404_RS09900 c61835d6976bf752170ddfdf4d36aec2 404 Pfam PF00480 ROK family 86 390 2.1E-73 T 09-03-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BV404_RS09900 c61835d6976bf752170ddfdf4d36aec2 404 Gene3D G3DSA:3.30.420.40 222 374 4.9E-48 T 09-03-2017 BV404_RS09900 c61835d6976bf752170ddfdf4d36aec2 404 SUPERFAMILY SSF46785 11 75 6.07E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS09900 c61835d6976bf752170ddfdf4d36aec2 404 SUPERFAMILY SSF53067 85 381 9.18E-56 T 09-03-2017 BV404_RS09900 c61835d6976bf752170ddfdf4d36aec2 404 Gene3D G3DSA:3.30.420.40 83 221 1.7E-33 T 09-03-2017 BV404_RS09900 c61835d6976bf752170ddfdf4d36aec2 404 Gene3D G3DSA:1.10.10.10 11 78 4.3E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS00145 68e4c2a51ad4d3952dc522b34ce3790b 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 09-03-2017 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BV404_RS00145 68e4c2a51ad4d3952dc522b34ce3790b 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 09-03-2017 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 BV404_RS00145 68e4c2a51ad4d3952dc522b34ce3790b 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 2.4E-139 T 09-03-2017 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BV404_RS00145 68e4c2a51ad4d3952dc522b34ce3790b 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 09-03-2017 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 BV404_RS00145 68e4c2a51ad4d3952dc522b34ce3790b 469 SUPERFAMILY SSF54368 3 100 5.89E-36 T 09-03-2017 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BV404_RS00145 68e4c2a51ad4d3952dc522b34ce3790b 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 8.8E-31 T 09-03-2017 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BV404_RS00145 68e4c2a51ad4d3952dc522b34ce3790b 469 Gene3D G3DSA:3.10.20.70 3 105 1.3E-39 T 09-03-2017 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BV404_RS00145 68e4c2a51ad4d3952dc522b34ce3790b 469 Gene3D G3DSA:3.30.590.10 106 455 4.9E-141 T 09-03-2017 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 BV404_RS00145 68e4c2a51ad4d3952dc522b34ce3790b 469 SMART SM01230 102 379 3.2E-154 T 09-03-2017 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BV404_RS00145 68e4c2a51ad4d3952dc522b34ce3790b 469 SUPERFAMILY SSF55931 102 468 1.47E-138 T 09-03-2017 BV404_RS00145 68e4c2a51ad4d3952dc522b34ce3790b 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 3.3E-212 T 09-03-2017 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BV404_RS11550 689ed007bd75b41fdb0b23bc1736e6c8 470 SUPERFAMILY SSF51971 145 399 2.3E-68 T 09-03-2017 BV404_RS11550 689ed007bd75b41fdb0b23bc1736e6c8 470 Gene3D G3DSA:3.40.50.720 399 469 2.6E-34 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS11550 689ed007bd75b41fdb0b23bc1736e6c8 470 Gene3D G3DSA:3.40.50.720 150 236 2.6E-34 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS11550 689ed007bd75b41fdb0b23bc1736e6c8 470 SUPERFAMILY SSF46548 6 157 9.42E-42 T 09-03-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 BV404_RS11550 689ed007bd75b41fdb0b23bc1736e6c8 470 PRINTS PR00419 Adrenodoxin reductase family signature 288 302 5.0E-37 T 09-03-2017 BV404_RS11550 689ed007bd75b41fdb0b23bc1736e6c8 470 PRINTS PR00419 Adrenodoxin reductase family signature 322 335 5.0E-37 T 09-03-2017 BV404_RS11550 689ed007bd75b41fdb0b23bc1736e6c8 470 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 5.0E-37 T 09-03-2017 BV404_RS11550 689ed007bd75b41fdb0b23bc1736e6c8 470 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 5.0E-37 T 09-03-2017 BV404_RS11550 689ed007bd75b41fdb0b23bc1736e6c8 470 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 5.0E-37 T 09-03-2017 BV404_RS11550 689ed007bd75b41fdb0b23bc1736e6c8 470 Gene3D G3DSA:1.10.1060.10 5 149 1.2E-47 T 09-03-2017 BV404_RS11550 689ed007bd75b41fdb0b23bc1736e6c8 470 Gene3D G3DSA:3.50.50.60 237 398 1.1E-50 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS11550 689ed007bd75b41fdb0b23bc1736e6c8 470 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 7.9E-39 T 09-03-2017 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 BV404_RS11550 689ed007bd75b41fdb0b23bc1736e6c8 470 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 457 7.5E-25 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS11550 689ed007bd75b41fdb0b23bc1736e6c8 470 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 470 1.0E-249 T 09-03-2017 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 BV404_RS08880 c2c84357c0f5135b84af0d66f8f1f3fc 55 Pfam PF10689 Protein of unknown function (DUF2496) 7 49 1.5E-23 T 09-03-2017 IPR019630 Protein of unknown function DUF2496, YbaM-related BV404_RS10285 56661c4388bbd3946c028466fad7c557 497 SUPERFAMILY SSF52540 250 484 7.27E-43 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS10285 56661c4388bbd3946c028466fad7c557 497 SUPERFAMILY SSF52540 5 233 2.72E-56 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS10285 56661c4388bbd3946c028466fad7c557 497 SMART SM00382 281 476 0.0011 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS10285 56661c4388bbd3946c028466fad7c557 497 SMART SM00382 31 221 6.8E-7 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS10285 56661c4388bbd3946c028466fad7c557 497 Pfam PF00005 ABC transporter 273 427 1.4E-21 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS10285 56661c4388bbd3946c028466fad7c557 497 Pfam PF00005 ABC transporter 22 173 8.5E-31 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS10285 56661c4388bbd3946c028466fad7c557 497 ProSitePatterns PS00211 ABC transporters family signature. 400 414 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS10285 56661c4388bbd3946c028466fad7c557 497 Gene3D G3DSA:3.40.50.300 259 492 1.9E-47 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS10285 56661c4388bbd3946c028466fad7c557 497 Gene3D G3DSA:3.40.50.300 3 235 2.1E-63 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11665 08371e387fd5a35efe7425a037266acf 397 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 22 389 41.305 T 09-03-2017 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 BV404_RS11665 08371e387fd5a35efe7425a037266acf 397 Pfam PF01098 Cell cycle protein 27 381 8.3E-116 T 09-03-2017 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 BV404_RS11665 08371e387fd5a35efe7425a037266acf 397 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 24 380 1.9E-130 T 09-03-2017 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 BV404_RS11665 08371e387fd5a35efe7425a037266acf 397 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 339 363 - T 09-03-2017 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 BV404_RS10105 205d3cd94a63e78fd382802fc052bcaa 341 SUPERFAMILY SSF52540 1 208 5.67E-50 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS10105 205d3cd94a63e78fd382802fc052bcaa 341 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 331 2.6E-108 T 09-03-2017 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 BV404_RS10105 205d3cd94a63e78fd382802fc052bcaa 341 Gene3D G3DSA:1.10.8.60 144 221 3.4E-33 T 09-03-2017 BV404_RS10105 205d3cd94a63e78fd382802fc052bcaa 341 Gene3D G3DSA:1.20.272.20 222 334 1.3E-47 T 09-03-2017 BV404_RS10105 205d3cd94a63e78fd382802fc052bcaa 341 SUPERFAMILY SSF48019 211 333 3.23E-35 T 09-03-2017 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 BV404_RS10105 205d3cd94a63e78fd382802fc052bcaa 341 Gene3D G3DSA:3.40.50.300 1 138 3.9E-55 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS10105 205d3cd94a63e78fd382802fc052bcaa 341 Pfam PF06144 DNA polymerase III, delta subunit 20 189 8.6E-46 T 09-03-2017 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 BV404_RS10105 205d3cd94a63e78fd382802fc052bcaa 341 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 213 332 3.4E-37 T 09-03-2017 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS05220 532c14291af160c2c7ab427d9a1872f8 199 Gene3D G3DSA:1.10.10.60 1 53 3.4E-21 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS05220 532c14291af160c2c7ab427d9a1872f8 199 Gene3D G3DSA:1.10.357.10 54 199 1.4E-31 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 BV404_RS05220 532c14291af160c2c7ab427d9a1872f8 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 5.8E-8 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BV404_RS05220 532c14291af160c2c7ab427d9a1872f8 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 5.8E-8 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BV404_RS05220 532c14291af160c2c7ab427d9a1872f8 199 SUPERFAMILY SSF46689 1 69 3.15E-18 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS05220 532c14291af160c2c7ab427d9a1872f8 199 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 143 197 1.1E-8 T 09-03-2017 BV404_RS05220 532c14291af160c2c7ab427d9a1872f8 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 8.1E-16 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BV404_RS15105 084de36f8bc1a269a08a7b0150c8c79e 328 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 1 328 4.7E-158 T 09-03-2017 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BV404_RS15105 084de36f8bc1a269a08a7b0150c8c79e 328 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 1 52 1.0E-17 T 09-03-2017 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BV404_RS15105 084de36f8bc1a269a08a7b0150c8c79e 328 SUPERFAMILY SSF55931 59 328 2.35E-106 T 09-03-2017 BV404_RS15105 084de36f8bc1a269a08a7b0150c8c79e 328 Gene3D G3DSA:3.30.590.10 63 328 2.4E-110 T 09-03-2017 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 BV404_RS15105 084de36f8bc1a269a08a7b0150c8c79e 328 ProSitePatterns PS00180 Glutamine synthetase signature 1. 7 25 - T 09-03-2017 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 BV404_RS15105 084de36f8bc1a269a08a7b0150c8c79e 328 SMART SM01230 59 328 9.9E-141 T 09-03-2017 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BV404_RS15105 084de36f8bc1a269a08a7b0150c8c79e 328 Gene3D G3DSA:3.10.20.70 1 62 2.2E-21 T 09-03-2017 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BV404_RS15105 084de36f8bc1a269a08a7b0150c8c79e 328 Pfam PF00120 Glutamine synthetase, catalytic domain 60 328 1.7E-105 T 09-03-2017 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BV404_RS15105 084de36f8bc1a269a08a7b0150c8c79e 328 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 216 231 - T 09-03-2017 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 BV404_RS15105 084de36f8bc1a269a08a7b0150c8c79e 328 SUPERFAMILY SSF54368 1 58 4.19E-19 T 09-03-2017 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BV404_RS01885 e352394372d8cf39934194069fc8ba49 626 ProSitePatterns PS00177 DNA topoisomerase II signature. 416 424 - T 09-03-2017 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BV404_RS01885 e352394372d8cf39934194069fc8ba49 626 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 626 47.236 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BV404_RS01885 e352394372d8cf39934194069fc8ba49 626 SMART SM00433 34 622 1.6E-219 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BV404_RS01885 e352394372d8cf39934194069fc8ba49 626 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 556 618 1.4E-27 T 09-03-2017 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 BV404_RS01885 e352394372d8cf39934194069fc8ba49 626 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 1.8E-127 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BV404_RS01885 e352394372d8cf39934194069fc8ba49 626 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 1.8E-127 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BV404_RS01885 e352394372d8cf39934194069fc8ba49 626 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 1.8E-127 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BV404_RS01885 e352394372d8cf39934194069fc8ba49 626 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 1.8E-127 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BV404_RS01885 e352394372d8cf39934194069fc8ba49 626 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 1.8E-127 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BV404_RS01885 e352394372d8cf39934194069fc8ba49 626 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 1.8E-127 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BV404_RS01885 e352394372d8cf39934194069fc8ba49 626 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 1.8E-127 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BV404_RS01885 e352394372d8cf39934194069fc8ba49 626 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 1.8E-127 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BV404_RS01885 e352394372d8cf39934194069fc8ba49 626 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 1.8E-127 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BV404_RS01885 e352394372d8cf39934194069fc8ba49 626 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 1.8E-127 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BV404_RS01885 e352394372d8cf39934194069fc8ba49 626 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 1.8E-127 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BV404_RS01885 e352394372d8cf39934194069fc8ba49 626 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 1.8E-127 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BV404_RS01885 e352394372d8cf39934194069fc8ba49 626 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 1.8E-127 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BV404_RS01885 e352394372d8cf39934194069fc8ba49 626 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 1.8E-127 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BV404_RS01885 e352394372d8cf39934194069fc8ba49 626 SUPERFAMILY SSF56719 388 619 1.02E-80 T 09-03-2017 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 BV404_RS01885 e352394372d8cf39934194069fc8ba49 626 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 3 623 0.0 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BV404_RS01885 e352394372d8cf39934194069fc8ba49 626 Gene3D G3DSA:3.30.565.10 15 212 1.5E-76 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS01885 e352394372d8cf39934194069fc8ba49 626 Pfam PF00204 DNA gyrase B 218 384 3.6E-42 T 09-03-2017 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BV404_RS01885 e352394372d8cf39934194069fc8ba49 626 SUPERFAMILY SSF54211 217 382 1.52E-46 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold BV404_RS01885 e352394372d8cf39934194069fc8ba49 626 Gene3D G3DSA:3.40.50.670 398 609 2.6E-81 T 09-03-2017 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BV404_RS01885 e352394372d8cf39934194069fc8ba49 626 SUPERFAMILY SSF55874 5 215 8.61E-67 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS01885 e352394372d8cf39934194069fc8ba49 626 Gene3D G3DSA:3.30.230.10 216 390 6.4E-48 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BV404_RS01885 e352394372d8cf39934194069fc8ba49 626 SMART SM00387 27 173 6.1E-20 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS01885 e352394372d8cf39934194069fc8ba49 626 PRINTS PR00418 DNA topoisomerase II family signature 479 495 3.3E-59 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BV404_RS01885 e352394372d8cf39934194069fc8ba49 626 PRINTS PR00418 DNA topoisomerase II family signature 109 123 3.3E-59 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BV404_RS01885 e352394372d8cf39934194069fc8ba49 626 PRINTS PR00418 DNA topoisomerase II family signature 497 514 3.3E-59 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BV404_RS01885 e352394372d8cf39934194069fc8ba49 626 PRINTS PR00418 DNA topoisomerase II family signature 560 576 3.3E-59 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BV404_RS01885 e352394372d8cf39934194069fc8ba49 626 PRINTS PR00418 DNA topoisomerase II family signature 31 46 3.3E-59 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BV404_RS01885 e352394372d8cf39934194069fc8ba49 626 PRINTS PR00418 DNA topoisomerase II family signature 517 529 3.3E-59 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BV404_RS01885 e352394372d8cf39934194069fc8ba49 626 PRINTS PR00418 DNA topoisomerase II family signature 266 279 3.3E-59 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BV404_RS01885 e352394372d8cf39934194069fc8ba49 626 PRINTS PR00418 DNA topoisomerase II family signature 414 428 3.3E-59 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BV404_RS01885 e352394372d8cf39934194069fc8ba49 626 PRINTS PR00418 DNA topoisomerase II family signature 66 79 3.3E-59 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BV404_RS01885 e352394372d8cf39934194069fc8ba49 626 Pfam PF01751 Toprim domain 413 522 4.6E-13 T 09-03-2017 IPR006171 Toprim domain BV404_RS01885 e352394372d8cf39934194069fc8ba49 626 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 171 9.8E-19 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS20515 12ef56961fdcb478e72745b7451f754f 75 Pfam PF04310 MukB N-terminal 1 74 6.3E-29 T 09-03-2017 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 BV404_RS09335 abe5870823ad750c36c2bee7cf5bbc41 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 145 159 6.0E-12 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BV404_RS09335 abe5870823ad750c36c2bee7cf5bbc41 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 187 6.0E-12 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BV404_RS09335 abe5870823ad750c36c2bee7cf5bbc41 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 175 6.0E-12 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BV404_RS09335 abe5870823ad750c36c2bee7cf5bbc41 208 SUPERFAMILY SSF46894 135 205 1.97E-20 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BV404_RS09335 abe5870823ad750c36c2bee7cf5bbc41 208 SMART SM00421 142 199 3.2E-21 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BV404_RS09335 abe5870823ad750c36c2bee7cf5bbc41 208 Gene3D G3DSA:1.10.10.10 150 204 2.8E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS09335 abe5870823ad750c36c2bee7cf5bbc41 208 Pfam PF00072 Response regulator receiver domain 4 116 6.9E-26 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS09335 abe5870823ad750c36c2bee7cf5bbc41 208 SUPERFAMILY SSF52172 1 125 7.12E-29 T 09-03-2017 IPR011006 CheY-like superfamily BV404_RS09335 abe5870823ad750c36c2bee7cf5bbc41 208 Pfam PF00196 Bacterial regulatory proteins, luxR family 145 199 2.1E-20 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BV404_RS09335 abe5870823ad750c36c2bee7cf5bbc41 208 ProSitePatterns PS00622 LuxR-type HTH domain signature. 159 186 - T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BV404_RS09335 abe5870823ad750c36c2bee7cf5bbc41 208 Gene3D G3DSA:3.40.50.2300 1 149 1.4E-33 T 09-03-2017 BV404_RS09335 abe5870823ad750c36c2bee7cf5bbc41 208 SMART SM00448 2 115 4.6E-24 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS08890 f1fdf1febe06a3f080329d7579143142 269 SUPERFAMILY SSF56219 1 267 1.83E-87 T 09-03-2017 IPR005135 Endonuclease/exonuclease/phosphatase BV404_RS08890 f1fdf1febe06a3f080329d7579143142 269 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 09-03-2017 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 BV404_RS08890 f1fdf1febe06a3f080329d7579143142 269 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 198 214 - T 09-03-2017 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 BV404_RS08890 f1fdf1febe06a3f080329d7579143142 269 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 260 2.5E-26 T 09-03-2017 IPR005135 Endonuclease/exonuclease/phosphatase BV404_RS08890 f1fdf1febe06a3f080329d7579143142 269 Gene3D G3DSA:3.60.10.10 1 267 3.6E-85 T 09-03-2017 IPR005135 Endonuclease/exonuclease/phosphatase BV404_RS08890 f1fdf1febe06a3f080329d7579143142 269 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 267 1.2E-87 T 09-03-2017 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 BV404_RS08890 f1fdf1febe06a3f080329d7579143142 269 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 267 3.1E-100 T 09-03-2017 BV404_RS13665 69dd1f6e2cf57075a8906210dce3b1eb 724 Pfam PF07715 TonB-dependent Receptor Plug Domain 74 170 2.6E-12 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 BV404_RS13665 69dd1f6e2cf57075a8906210dce3b1eb 724 Gene3D G3DSA:2.40.170.20 190 724 1.3E-100 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 BV404_RS13665 69dd1f6e2cf57075a8906210dce3b1eb 724 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 75 724 7.3E-113 T 09-03-2017 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 BV404_RS13665 69dd1f6e2cf57075a8906210dce3b1eb 724 SUPERFAMILY SSF56935 66 724 4.97E-102 T 09-03-2017 BV404_RS13665 69dd1f6e2cf57075a8906210dce3b1eb 724 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 707 724 - T 09-03-2017 IPR010917 TonB-dependent receptor, conserved site BV404_RS13665 69dd1f6e2cf57075a8906210dce3b1eb 724 Gene3D G3DSA:2.170.130.10 68 186 4.4E-24 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 BV404_RS13665 69dd1f6e2cf57075a8906210dce3b1eb 724 Pfam PF00593 TonB dependent receptor 481 722 5.8E-32 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 BV404_RS10590 0409e47e79a4b45d45e36651848f6479 294 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 79 95 - T 09-03-2017 IPR000092 Polyprenyl synthetase GO:0008299 BV404_RS10590 0409e47e79a4b45d45e36651848f6479 294 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 09-03-2017 IPR000092 Polyprenyl synthetase GO:0008299 BV404_RS10590 0409e47e79a4b45d45e36651848f6479 294 Pfam PF00348 Polyprenyl synthetase 32 270 7.5E-58 T 09-03-2017 IPR000092 Polyprenyl synthetase GO:0008299 BV404_RS10590 0409e47e79a4b45d45e36651848f6479 294 Gene3D G3DSA:1.10.600.10 4 292 4.2E-90 T 09-03-2017 IPR008949 Isoprenoid synthase domain BV404_RS10590 0409e47e79a4b45d45e36651848f6479 294 SUPERFAMILY SSF48576 3 289 8.32E-87 T 09-03-2017 IPR008949 Isoprenoid synthase domain BV404_RS17170 b04f34697d0d6b385b8c17fa2f15033b 145 Gene3D G3DSA:3.30.930.10 1 144 2.3E-23 T 09-03-2017 BV404_RS17170 b04f34697d0d6b385b8c17fa2f15033b 145 Pfam PF00152 tRNA synthetases class II (D, K and N) 20 144 8.1E-9 T 09-03-2017 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BV404_RS17170 b04f34697d0d6b385b8c17fa2f15033b 145 SUPERFAMILY SSF55681 1 144 6.33E-24 T 09-03-2017 BV404_RS11920 9a25547ecbf381fff1549020954c17a5 395 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 65 379 1.9E-76 T 09-03-2017 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 BV404_RS11920 9a25547ecbf381fff1549020954c17a5 395 Gene3D G3DSA:3.40.1160.10 4 244 2.1E-73 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase BV404_RS11920 9a25547ecbf381fff1549020954c17a5 395 SUPERFAMILY SSF53633 6 243 2.62E-76 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase BV404_RS11920 9a25547ecbf381fff1549020954c17a5 395 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 09-03-2017 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 BV404_RS11920 9a25547ecbf381fff1549020954c17a5 395 Pfam PF00696 Amino acid kinase family 5 231 3.9E-53 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase BV404_RS07580 b51bd975f6c5582f7f8811f17b88278f 639 SMART SM00267 469 639 5.9E-56 T 09-03-2017 IPR000160 GGDEF domain BV404_RS07580 b51bd975f6c5582f7f8811f17b88278f 639 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 374 476 1.0E-8 T 09-03-2017 IPR000014 PAS domain BV404_RS07580 b51bd975f6c5582f7f8811f17b88278f 639 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 96 219 1.7E-10 T 09-03-2017 IPR000014 PAS domain BV404_RS07580 b51bd975f6c5582f7f8811f17b88278f 639 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 242 351 2.5E-10 T 09-03-2017 IPR000014 PAS domain BV404_RS07580 b51bd975f6c5582f7f8811f17b88278f 639 Pfam PF08447 PAS fold 119 208 6.5E-23 T 09-03-2017 IPR013655 PAS fold-3 GO:0005515 BV404_RS07580 b51bd975f6c5582f7f8811f17b88278f 639 Pfam PF08447 PAS fold 253 339 1.6E-16 T 09-03-2017 IPR013655 PAS fold-3 GO:0005515 BV404_RS07580 b51bd975f6c5582f7f8811f17b88278f 639 Pfam PF08447 PAS fold 379 457 1.5E-10 T 09-03-2017 IPR013655 PAS fold-3 GO:0005515 BV404_RS07580 b51bd975f6c5582f7f8811f17b88278f 639 SUPERFAMILY SSF55073 485 639 3.06E-48 T 09-03-2017 IPR029787 Nucleotide cyclase BV404_RS07580 b51bd975f6c5582f7f8811f17b88278f 639 Pfam PF00990 Diguanylate cyclase, GGDEF domain 481 636 5.8E-48 T 09-03-2017 IPR000160 GGDEF domain BV404_RS07580 b51bd975f6c5582f7f8811f17b88278f 639 SUPERFAMILY SSF55785 234 346 1.24E-16 T 09-03-2017 IPR000014 PAS domain BV404_RS07580 b51bd975f6c5582f7f8811f17b88278f 639 Gene3D G3DSA:3.30.450.20 227 344 8.2E-20 T 09-03-2017 BV404_RS07580 b51bd975f6c5582f7f8811f17b88278f 639 SMART SM00091 226 296 4.2 T 09-03-2017 IPR000014 PAS domain BV404_RS07580 b51bd975f6c5582f7f8811f17b88278f 639 SMART SM00091 95 164 0.0064 T 09-03-2017 IPR000014 PAS domain BV404_RS07580 b51bd975f6c5582f7f8811f17b88278f 639 SMART SM00091 351 423 6.7 T 09-03-2017 IPR000014 PAS domain BV404_RS07580 b51bd975f6c5582f7f8811f17b88278f 639 SMART SM00086 171 214 2.8E-8 T 09-03-2017 IPR001610 PAC motif BV404_RS07580 b51bd975f6c5582f7f8811f17b88278f 639 SMART SM00086 427 469 55.0 T 09-03-2017 IPR001610 PAC motif BV404_RS07580 b51bd975f6c5582f7f8811f17b88278f 639 SMART SM00086 304 346 1.1E-10 T 09-03-2017 IPR001610 PAC motif BV404_RS07580 b51bd975f6c5582f7f8811f17b88278f 639 Gene3D G3DSA:3.30.450.20 350 478 3.5E-16 T 09-03-2017 BV404_RS07580 b51bd975f6c5582f7f8811f17b88278f 639 Gene3D G3DSA:3.30.450.20 95 221 3.9E-31 T 09-03-2017 BV404_RS07580 b51bd975f6c5582f7f8811f17b88278f 639 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 476 638 2.8E-52 T 09-03-2017 IPR000160 GGDEF domain BV404_RS07580 b51bd975f6c5582f7f8811f17b88278f 639 SUPERFAMILY SSF55785 372 471 1.19E-12 T 09-03-2017 IPR000014 PAS domain BV404_RS07580 b51bd975f6c5582f7f8811f17b88278f 639 SUPERFAMILY SSF55785 100 215 4.01E-22 T 09-03-2017 IPR000014 PAS domain BV404_RS07580 b51bd975f6c5582f7f8811f17b88278f 639 Gene3D G3DSA:3.30.70.270 482 639 2.6E-54 T 09-03-2017 BV404_RS13080 6badf88e117effc5879df9e7e9d1c2d0 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 8.4E-58 T 09-03-2017 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BV404_RS13080 6badf88e117effc5879df9e7e9d1c2d0 1342 Gene3D G3DSA:2.30.150.10 592 656 8.5E-28 T 09-03-2017 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BV404_RS13080 6badf88e117effc5879df9e7e9d1c2d0 1342 Gene3D G3DSA:3.90.1100.10 445 591 1.1E-145 T 09-03-2017 BV404_RS13080 6badf88e117effc5879df9e7e9d1c2d0 1342 Gene3D G3DSA:3.90.1100.10 659 713 1.1E-145 T 09-03-2017 BV404_RS13080 6badf88e117effc5879df9e7e9d1c2d0 1342 Gene3D G3DSA:3.90.1100.10 20 151 1.1E-145 T 09-03-2017 BV404_RS13080 6badf88e117effc5879df9e7e9d1c2d0 1342 SUPERFAMILY SSF64484 343 939 0.0 T 09-03-2017 BV404_RS13080 6badf88e117effc5879df9e7e9d1c2d0 1342 SUPERFAMILY SSF64484 11 226 0.0 T 09-03-2017 BV404_RS13080 6badf88e117effc5879df9e7e9d1c2d0 1342 SUPERFAMILY SSF64484 1039 1341 0.0 T 09-03-2017 BV404_RS13080 6badf88e117effc5879df9e7e9d1c2d0 1342 Gene3D G3DSA:2.40.270.10 1060 1241 3.5E-86 T 09-03-2017 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BV404_RS13080 6badf88e117effc5879df9e7e9d1c2d0 1342 Gene3D G3DSA:2.40.270.10 793 820 3.5E-86 T 09-03-2017 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BV404_RS13080 6badf88e117effc5879df9e7e9d1c2d0 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1338 0.0 T 09-03-2017 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BV404_RS13080 6badf88e117effc5879df9e7e9d1c2d0 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 09-03-2017 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BV404_RS13080 6badf88e117effc5879df9e7e9d1c2d0 1342 Gene3D G3DSA:3.90.1110.10 153 230 8.4E-65 T 09-03-2017 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BV404_RS13080 6badf88e117effc5879df9e7e9d1c2d0 1342 Gene3D G3DSA:3.90.1110.10 346 444 8.4E-65 T 09-03-2017 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BV404_RS13080 6badf88e117effc5879df9e7e9d1c2d0 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1265 1339 3.7E-27 T 09-03-2017 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BV404_RS13080 6badf88e117effc5879df9e7e9d1c2d0 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1263 4.6E-157 T 09-03-2017 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BV404_RS13080 6badf88e117effc5879df9e7e9d1c2d0 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1341 12.29 T 09-03-2017 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BV404_RS13080 6badf88e117effc5879df9e7e9d1c2d0 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 1.6E-23 T 09-03-2017 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BV404_RS13080 6badf88e117effc5879df9e7e9d1c2d0 1342 Gene3D G3DSA:2.40.50.100 715 792 8.0E-30 T 09-03-2017 BV404_RS13080 6badf88e117effc5879df9e7e9d1c2d0 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 233 5.8E-8 T 09-03-2017 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BV404_RS13080 6badf88e117effc5879df9e7e9d1c2d0 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 337 454 3.9E-16 T 09-03-2017 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BV404_RS13080 6badf88e117effc5879df9e7e9d1c2d0 1342 Gene3D G3DSA:2.40.50.150 1045 1059 1.3E-57 T 09-03-2017 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BV404_RS13080 6badf88e117effc5879df9e7e9d1c2d0 1342 Gene3D G3DSA:2.40.50.150 828 937 1.3E-57 T 09-03-2017 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BV404_RS13080 6badf88e117effc5879df9e7e9d1c2d0 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 1.1E-28 T 09-03-2017 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BV404_RS13105 dc3705571783228c3f37c4e10f518eb7 182 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 180 1.8E-70 T 09-03-2017 IPR001062 Transcription antitermination protein, NusG GO:0032784 BV404_RS13105 dc3705571783228c3f37c4e10f518eb7 182 Gene3D G3DSA:3.30.70.940 6 117 5.5E-44 T 09-03-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 BV404_RS13105 dc3705571783228c3f37c4e10f518eb7 182 SMART SM00739 127 154 4.8E-5 T 09-03-2017 IPR005824 KOW BV404_RS13105 dc3705571783228c3f37c4e10f518eb7 182 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 6.8E-22 T 09-03-2017 IPR001062 Transcription antitermination protein, NusG GO:0032784 BV404_RS13105 dc3705571783228c3f37c4e10f518eb7 182 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 6.8E-22 T 09-03-2017 IPR001062 Transcription antitermination protein, NusG GO:0032784 BV404_RS13105 dc3705571783228c3f37c4e10f518eb7 182 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 6.8E-22 T 09-03-2017 IPR001062 Transcription antitermination protein, NusG GO:0032784 BV404_RS13105 dc3705571783228c3f37c4e10f518eb7 182 SMART SM00738 6 115 1.0E-50 T 09-03-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 BV404_RS13105 dc3705571783228c3f37c4e10f518eb7 182 Gene3D G3DSA:2.30.30.30 120 181 5.4E-31 T 09-03-2017 IPR014722 Ribosomal protein L2 domain 2 BV404_RS13105 dc3705571783228c3f37c4e10f518eb7 182 SUPERFAMILY SSF82679 6 116 4.58E-40 T 09-03-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 BV404_RS13105 dc3705571783228c3f37c4e10f518eb7 182 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 25.997 T 09-03-2017 IPR001062 Transcription antitermination protein, NusG GO:0032784 BV404_RS13105 dc3705571783228c3f37c4e10f518eb7 182 Pfam PF02357 Transcription termination factor nusG 7 112 8.3E-27 T 09-03-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 BV404_RS13105 dc3705571783228c3f37c4e10f518eb7 182 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 09-03-2017 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site BV404_RS13105 dc3705571783228c3f37c4e10f518eb7 182 SUPERFAMILY SSF50104 125 181 2.93E-19 T 09-03-2017 IPR008991 Translation protein SH3-like domain BV404_RS13105 dc3705571783228c3f37c4e10f518eb7 182 Pfam PF00467 KOW motif 131 162 3.7E-7 T 09-03-2017 IPR005824 KOW BV404_RS12875 eb8c6e51d3107dcd86f56bca60b1a45e 124 Gene3D G3DSA:2.40.50.140 1 123 7.9E-66 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS12875 eb8c6e51d3107dcd86f56bca60b1a45e 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 7.1E-60 T 09-03-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS12875 eb8c6e51d3107dcd86f56bca60b1a45e 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 7.1E-60 T 09-03-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS12875 eb8c6e51d3107dcd86f56bca60b1a45e 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 7.1E-60 T 09-03-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS12875 eb8c6e51d3107dcd86f56bca60b1a45e 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 7.1E-60 T 09-03-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS12875 eb8c6e51d3107dcd86f56bca60b1a45e 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 7.1E-60 T 09-03-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS12875 eb8c6e51d3107dcd86f56bca60b1a45e 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 7.1E-60 T 09-03-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS12875 eb8c6e51d3107dcd86f56bca60b1a45e 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.768 T 09-03-2017 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS12875 eb8c6e51d3107dcd86f56bca60b1a45e 124 PIRSF PIRSF002133 1 124 1.7E-54 T 09-03-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS12875 eb8c6e51d3107dcd86f56bca60b1a45e 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 09-03-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS12875 eb8c6e51d3107dcd86f56bca60b1a45e 124 Pfam PF00164 Ribosomal protein S12/S23 5 123 1.7E-43 T 09-03-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS12875 eb8c6e51d3107dcd86f56bca60b1a45e 124 SUPERFAMILY SSF50249 3 123 4.37E-52 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS12875 eb8c6e51d3107dcd86f56bca60b1a45e 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 7.7E-71 T 09-03-2017 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS00490 f0595b6fcbc05ada603ab74c042a9e2f 302 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 12 287 5.6E-71 T 09-03-2017 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 BV404_RS00490 f0595b6fcbc05ada603ab74c042a9e2f 302 Gene3D G3DSA:1.20.1510.10 12 206 2.9E-44 T 09-03-2017 IPR027469 Cation efflux protein transmembrane domain BV404_RS00490 f0595b6fcbc05ada603ab74c042a9e2f 302 SUPERFAMILY SSF160240 210 288 6.54E-23 T 09-03-2017 BV404_RS00490 f0595b6fcbc05ada603ab74c042a9e2f 302 SUPERFAMILY SSF161111 8 207 5.23E-52 T 09-03-2017 BV404_RS00490 f0595b6fcbc05ada603ab74c042a9e2f 302 Gene3D G3DSA:3.30.70.1350 207 288 7.3E-29 T 09-03-2017 IPR027470 Cation efflux protein, cytoplasmic domain BV404_RS00490 f0595b6fcbc05ada603ab74c042a9e2f 302 Pfam PF01545 Cation efflux family 15 206 2.0E-45 T 09-03-2017 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 BV404_RS00490 f0595b6fcbc05ada603ab74c042a9e2f 302 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 287 9.4E-26 T 09-03-2017 IPR027470 Cation efflux protein, cytoplasmic domain BV404_RS01030 8b0de29437eefc6fc28c7dc45f277ddd 144 Gene3D G3DSA:3.100.10.10 32 143 8.2E-27 T 09-03-2017 BV404_RS01030 8b0de29437eefc6fc28c7dc45f277ddd 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 2.0E-31 T 09-03-2017 IPR021131 Ribosomal protein L18e/L15P BV404_RS01030 8b0de29437eefc6fc28c7dc45f277ddd 144 SUPERFAMILY SSF52080 4 143 8.24E-47 T 09-03-2017 IPR021131 Ribosomal protein L18e/L15P BV404_RS01030 8b0de29437eefc6fc28c7dc45f277ddd 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 18.992 T 09-03-2017 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 BV404_RS01030 8b0de29437eefc6fc28c7dc45f277ddd 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 09-03-2017 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS01030 8b0de29437eefc6fc28c7dc45f277ddd 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 3 143 6.7E-50 T 09-03-2017 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS09375 a749d8be73484e4925cb5e333f31c40e 401 Pfam PF07670 Nucleoside recognition 89 184 1.6E-6 T 09-03-2017 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 BV404_RS09375 a749d8be73484e4925cb5e333f31c40e 401 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 5 77 1.7E-24 T 09-03-2017 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 BV404_RS09375 a749d8be73484e4925cb5e333f31c40e 401 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 191 398 1.7E-71 T 09-03-2017 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 BV404_RS09375 a749d8be73484e4925cb5e333f31c40e 401 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 1 397 1.7E-136 T 09-03-2017 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 BV404_RS22065 77ad22b3d12b551fab45aa72ecf3eb98 198 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 7 51 5.3E-23 T 09-03-2017 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal BV404_RS22065 77ad22b3d12b551fab45aa72ecf3eb98 198 SUPERFAMILY SSF46626 23 46 9.19E-29 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 BV404_RS22065 77ad22b3d12b551fab45aa72ecf3eb98 198 SUPERFAMILY SSF46626 115 197 9.19E-29 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 BV404_RS22065 77ad22b3d12b551fab45aa72ecf3eb98 198 PRINTS PR00605 Class IC cytochrome C signature 134 145 8.4E-5 T 09-03-2017 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 BV404_RS22065 77ad22b3d12b551fab45aa72ecf3eb98 198 PRINTS PR00605 Class IC cytochrome C signature 176 198 8.4E-5 T 09-03-2017 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 BV404_RS22065 77ad22b3d12b551fab45aa72ecf3eb98 198 Gene3D G3DSA:1.10.760.10 28 50 7.4E-30 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 BV404_RS22065 77ad22b3d12b551fab45aa72ecf3eb98 198 Gene3D G3DSA:1.10.760.10 119 197 7.4E-30 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 BV404_RS22065 77ad22b3d12b551fab45aa72ecf3eb98 198 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 124 197 6.4E-15 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 BV404_RS00800 6ba5d94a8f9950ce925f6d13a8711f81 223 Gene3D G3DSA:3.20.20.70 2 220 3.5E-97 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS00800 6ba5d94a8f9950ce925f6d13a8711f81 223 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 09-03-2017 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 BV404_RS00800 6ba5d94a8f9950ce925f6d13a8711f81 223 SUPERFAMILY SSF51366 4 218 5.76E-78 T 09-03-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 BV404_RS00800 6ba5d94a8f9950ce925f6d13a8711f81 223 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 2.1E-91 T 09-03-2017 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 BV404_RS00800 6ba5d94a8f9950ce925f6d13a8711f81 223 PIRSF PIRSF001461 1 223 2.6E-106 T 09-03-2017 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 BV404_RS00800 6ba5d94a8f9950ce925f6d13a8711f81 223 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 6.3E-100 T 09-03-2017 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 BV404_RS00800 6ba5d94a8f9950ce925f6d13a8711f81 223 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 09-03-2017 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 BV404_RS08020 73a7a129266241e46f9ca1eaf82ccb87 295 Gene3D G3DSA:3.40.140.10 35 177 8.7E-44 T 09-03-2017 BV404_RS08020 73a7a129266241e46f9ca1eaf82ccb87 295 Hamap MF_01558 Cytidine deaminase [cdd]. 1 293 48.633 T 09-03-2017 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 BV404_RS08020 73a7a129266241e46f9ca1eaf82ccb87 295 Gene3D G3DSA:3.40.140.10 184 289 2.6E-22 T 09-03-2017 BV404_RS08020 73a7a129266241e46f9ca1eaf82ccb87 295 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 277 6.3E-42 T 09-03-2017 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 BV404_RS08020 73a7a129266241e46f9ca1eaf82ccb87 295 PIRSF PIRSF006334 14 295 6.9E-107 T 09-03-2017 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 BV404_RS08020 73a7a129266241e46f9ca1eaf82ccb87 295 SUPERFAMILY SSF53927 1 145 6.69E-42 T 09-03-2017 IPR016193 Cytidine deaminase-like GO:0003824 BV404_RS08020 73a7a129266241e46f9ca1eaf82ccb87 295 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 09-03-2017 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 BV404_RS08020 73a7a129266241e46f9ca1eaf82ccb87 295 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 29 295 3.2E-99 T 09-03-2017 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 BV404_RS08020 73a7a129266241e46f9ca1eaf82ccb87 295 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 58 142 1.6E-13 T 09-03-2017 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 BV404_RS08020 73a7a129266241e46f9ca1eaf82ccb87 295 SUPERFAMILY SSF53927 152 284 1.51E-35 T 09-03-2017 IPR016193 Cytidine deaminase-like GO:0003824 BV404_RS09030 77906791a9297d349fa4ffc94b866d4c 179 Pfam PF13302 Acetyltransferase (GNAT) domain 11 152 2.2E-23 T 09-03-2017 IPR000182 GNAT domain GO:0008080 BV404_RS09030 77906791a9297d349fa4ffc94b866d4c 179 Gene3D G3DSA:3.40.630.30 2 177 8.0E-46 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS09030 77906791a9297d349fa4ffc94b866d4c 179 SUPERFAMILY SSF55729 3 177 5.23E-45 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS22750 97dd96ce3967851ef469940709cfd79c 718 SUPERFAMILY SSF51011 581 693 5.9E-34 T 09-03-2017 BV404_RS22750 97dd96ce3967851ef469940709cfd79c 718 TIGRFAM TIGR02103 pullul_strch: alpha-1,6-glucosidases, pullulanase-type 2 683 8.9E-288 T 09-03-2017 IPR011839 Alpha-1,6-glucosidases, pullulanase-type GO:0005975|GO:0051060 BV404_RS22750 97dd96ce3967851ef469940709cfd79c 718 Pfam PF11852 Domain of unknown function (DUF3372) 519 681 1.3E-56 T 09-03-2017 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal BV404_RS22750 97dd96ce3967851ef469940709cfd79c 718 Gene3D G3DSA:3.20.20.80 427 518 8.0E-82 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 BV404_RS22750 97dd96ce3967851ef469940709cfd79c 718 Gene3D G3DSA:3.20.20.80 172 395 8.0E-82 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 BV404_RS22750 97dd96ce3967851ef469940709cfd79c 718 Gene3D G3DSA:3.20.20.80 43 120 8.0E-82 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 BV404_RS22750 97dd96ce3967851ef469940709cfd79c 718 Gene3D G3DSA:3.20.20.80 557 578 8.0E-82 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 BV404_RS22750 97dd96ce3967851ef469940709cfd79c 718 SUPERFAMILY SSF51445 25 578 2.88E-127 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily BV404_RS04865 75231646158f2724266a36a622bf9bcf 467 Gene3D G3DSA:3.40.640.10 154 363 1.1E-51 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 BV404_RS04865 75231646158f2724266a36a622bf9bcf 467 SUPERFAMILY SSF53383 117 464 1.73E-75 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase BV404_RS04865 75231646158f2724266a36a622bf9bcf 467 SUPERFAMILY SSF46785 14 80 3.14E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS04865 75231646158f2724266a36a622bf9bcf 467 Pfam PF00155 Aminotransferase class I and II 147 435 1.8E-17 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BV404_RS04865 75231646158f2724266a36a622bf9bcf 467 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 1.9E-14 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BV404_RS04865 75231646158f2724266a36a622bf9bcf 467 SMART SM00345 17 76 1.4E-14 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BV404_RS04865 75231646158f2724266a36a622bf9bcf 467 Gene3D G3DSA:1.10.10.10 14 78 1.1E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS03870 85df353241d474d41c1b10802e7a2fe6 577 Pfam PF00750 tRNA synthetases class I (R) 98 447 1.8E-161 T 09-03-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 BV404_RS03870 85df353241d474d41c1b10802e7a2fe6 577 Pfam PF05746 DALR anticodon binding domain 461 577 8.2E-36 T 09-03-2017 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 BV404_RS03870 85df353241d474d41c1b10802e7a2fe6 577 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 577 28.223 T 09-03-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 BV404_RS03870 85df353241d474d41c1b10802e7a2fe6 577 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 577 5.7E-200 T 09-03-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 BV404_RS03870 85df353241d474d41c1b10802e7a2fe6 577 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 1.9E-20 T 09-03-2017 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 BV404_RS03870 85df353241d474d41c1b10802e7a2fe6 577 Gene3D G3DSA:1.10.730.10 455 577 9.2E-38 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BV404_RS03870 85df353241d474d41c1b10802e7a2fe6 577 SUPERFAMILY SSF55190 2 101 3.27E-22 T 09-03-2017 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 BV404_RS03870 85df353241d474d41c1b10802e7a2fe6 577 SUPERFAMILY SSF47323 455 577 5.1E-35 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BV404_RS03870 85df353241d474d41c1b10802e7a2fe6 577 SMART SM01016 5 87 7.6E-29 T 09-03-2017 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 BV404_RS03870 85df353241d474d41c1b10802e7a2fe6 577 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 09-03-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BV404_RS03870 85df353241d474d41c1b10802e7a2fe6 577 SMART SM00836 461 577 3.6E-41 T 09-03-2017 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 BV404_RS03870 85df353241d474d41c1b10802e7a2fe6 577 SUPERFAMILY SSF52374 111 455 1.92E-96 T 09-03-2017 BV404_RS03870 85df353241d474d41c1b10802e7a2fe6 577 Gene3D G3DSA:3.40.50.620 110 454 1.5E-114 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS03870 85df353241d474d41c1b10802e7a2fe6 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 304 325 3.6E-25 T 09-03-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 BV404_RS03870 85df353241d474d41c1b10802e7a2fe6 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 3.6E-25 T 09-03-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 BV404_RS03870 85df353241d474d41c1b10802e7a2fe6 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 3.6E-25 T 09-03-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 BV404_RS03870 85df353241d474d41c1b10802e7a2fe6 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 3.6E-25 T 09-03-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 BV404_RS03870 85df353241d474d41c1b10802e7a2fe6 577 Gene3D G3DSA:3.30.1360.70 2 105 3.2E-34 T 09-03-2017 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 BV404_RS11680 dbdd5cddc437ccfe7673d0cbe5d2cc91 453 Gene3D G3DSA:3.40.1390.10 2 80 1.6E-24 T 09-03-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 BV404_RS11680 dbdd5cddc437ccfe7673d0cbe5d2cc91 453 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 448 1.2E-139 T 09-03-2017 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BV404_RS11680 dbdd5cddc437ccfe7673d0cbe5d2cc91 453 SUPERFAMILY SSF63418 2 96 1.2E-23 T 09-03-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 BV404_RS11680 dbdd5cddc437ccfe7673d0cbe5d2cc91 453 Pfam PF08245 Mur ligase middle domain 105 294 2.4E-46 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 BV404_RS11680 dbdd5cddc437ccfe7673d0cbe5d2cc91 453 Gene3D G3DSA:3.40.1190.10 85 311 2.5E-70 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 BV404_RS11680 dbdd5cddc437ccfe7673d0cbe5d2cc91 453 SUPERFAMILY SSF53623 100 311 1.07E-54 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 BV404_RS11680 dbdd5cddc437ccfe7673d0cbe5d2cc91 453 SUPERFAMILY SSF53244 314 448 1.25E-31 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BV404_RS11680 dbdd5cddc437ccfe7673d0cbe5d2cc91 453 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 449 32.62 T 09-03-2017 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BV404_RS11680 dbdd5cddc437ccfe7673d0cbe5d2cc91 453 Pfam PF01225 Mur ligase family, catalytic domain 24 79 6.8E-8 T 09-03-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 BV404_RS11680 dbdd5cddc437ccfe7673d0cbe5d2cc91 453 Gene3D G3DSA:3.90.190.20 314 451 3.6E-38 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BV404_RS11680 dbdd5cddc437ccfe7673d0cbe5d2cc91 453 Pfam PF02875 Mur ligase family, glutamate ligase domain 314 390 1.2E-12 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BV404_RS04740 00cf61e0d6691440b5cd69bb7efe8b6b 152 Pfam PF01037 Lrp/AsnC ligand binding domain 69 142 1.5E-22 T 09-03-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BV404_RS04740 00cf61e0d6691440b5cd69bb7efe8b6b 152 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 49 2.1E-17 T 09-03-2017 BV404_RS04740 00cf61e0d6691440b5cd69bb7efe8b6b 152 Gene3D G3DSA:1.10.10.10 4 55 2.3E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS04740 00cf61e0d6691440b5cd69bb7efe8b6b 152 Gene3D G3DSA:3.30.70.920 56 140 1.0E-29 T 09-03-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BV404_RS04740 00cf61e0d6691440b5cd69bb7efe8b6b 152 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 09-03-2017 IPR019885 Transcription regulator HTH, AsnC-type, conserved site BV404_RS04740 00cf61e0d6691440b5cd69bb7efe8b6b 152 SUPERFAMILY SSF54909 63 152 1.34E-21 T 09-03-2017 IPR011008 Dimeric alpha-beta barrel BV404_RS04740 00cf61e0d6691440b5cd69bb7efe8b6b 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 7.8E-13 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 BV404_RS04740 00cf61e0d6691440b5cd69bb7efe8b6b 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 7.8E-13 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 BV404_RS04740 00cf61e0d6691440b5cd69bb7efe8b6b 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 7.8E-13 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 BV404_RS04740 00cf61e0d6691440b5cd69bb7efe8b6b 152 SUPERFAMILY SSF46785 2 61 8.9E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS04740 00cf61e0d6691440b5cd69bb7efe8b6b 152 SMART SM00344 3 112 2.2E-47 T 09-03-2017 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 BV404_RS21950 e4dbb7300002650315c44fbaa1421b6d 92 Pfam PF02146 Sir2 family 3 85 1.5E-19 T 09-03-2017 IPR003000 Sirtuin family GO:0070403 BV404_RS21950 e4dbb7300002650315c44fbaa1421b6d 92 Gene3D G3DSA:3.30.1600.10 1 16 3.2E-7 T 09-03-2017 IPR026591 Sirtuin family, catalytic core small domain BV404_RS21950 e4dbb7300002650315c44fbaa1421b6d 92 Gene3D G3DSA:3.30.1600.10 69 87 3.2E-7 T 09-03-2017 IPR026591 Sirtuin family, catalytic core small domain BV404_RS21950 e4dbb7300002650315c44fbaa1421b6d 92 Gene3D G3DSA:3.40.50.1220 26 68 3.3E-16 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain BV404_RS21950 e4dbb7300002650315c44fbaa1421b6d 92 SUPERFAMILY SSF52467 1 85 8.41E-23 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain BV404_RS10800 ab65f32d0e55810e1efd5822a70f5b58 409 Pfam PF01420 Type I restriction modification DNA specificity domain 3 174 2.1E-12 T 09-03-2017 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 BV404_RS10800 ab65f32d0e55810e1efd5822a70f5b58 409 Pfam PF01420 Type I restriction modification DNA specificity domain 203 374 6.5E-18 T 09-03-2017 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 BV404_RS10800 ab65f32d0e55810e1efd5822a70f5b58 409 SUPERFAMILY SSF116734 2 198 8.5E-31 T 09-03-2017 BV404_RS10800 ab65f32d0e55810e1efd5822a70f5b58 409 SUPERFAMILY SSF116734 202 407 2.29E-38 T 09-03-2017 BV404_RS00725 407546de6885f62c3f3f0032cb51fea4 405 Pfam PF00764 Arginosuccinate synthase 10 396 2.7E-144 T 09-03-2017 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BV404_RS00725 407546de6885f62c3f3f0032cb51fea4 405 SUPERFAMILY SSF52402 7 170 8.16E-47 T 09-03-2017 BV404_RS00725 407546de6885f62c3f3f0032cb51fea4 405 Gene3D G3DSA:3.40.50.620 7 175 7.4E-62 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS00725 407546de6885f62c3f3f0032cb51fea4 405 SUPERFAMILY SSF69864 177 399 2.88E-85 T 09-03-2017 BV404_RS00725 407546de6885f62c3f3f0032cb51fea4 405 Hamap MF_00005 Argininosuccinate synthase [argG]. 6 402 51.688 T 09-03-2017 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BV404_RS00725 407546de6885f62c3f3f0032cb51fea4 405 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 12 20 - T 09-03-2017 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BV404_RS00725 407546de6885f62c3f3f0032cb51fea4 405 Gene3D G3DSA:3.90.1260.10 179 401 1.9E-86 T 09-03-2017 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BV404_RS00725 407546de6885f62c3f3f0032cb51fea4 405 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 121 132 - T 09-03-2017 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BV404_RS00725 407546de6885f62c3f3f0032cb51fea4 405 TIGRFAM TIGR00032 argG: argininosuccinate synthase 8 395 8.8E-136 T 09-03-2017 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BV404_RS05335 919e44aac3c8547a4e07e45cdcfeb19f 514 Pfam PF00221 Aromatic amino acid lyase 16 482 4.7E-163 T 09-03-2017 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 BV404_RS05335 919e44aac3c8547a4e07e45cdcfeb19f 514 SUPERFAMILY SSF48557 4 511 2.28E-173 T 09-03-2017 IPR008948 L-Aspartase-like GO:0003824 BV404_RS05335 919e44aac3c8547a4e07e45cdcfeb19f 514 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 145 161 - T 09-03-2017 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 BV404_RS05335 919e44aac3c8547a4e07e45cdcfeb19f 514 Gene3D G3DSA:1.10.275.10 3 203 8.7E-65 T 09-03-2017 IPR024083 Fumarase/histidase, N-terminal BV404_RS05335 919e44aac3c8547a4e07e45cdcfeb19f 514 Gene3D G3DSA:1.20.200.10 204 511 2.9E-101 T 09-03-2017 BV404_RS04340 f96f33fc068d4ab2fd1d856ffbd89728 313 SMART SM00448 184 305 1.6E-12 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS04340 f96f33fc068d4ab2fd1d856ffbd89728 313 Gene3D G3DSA:2.40.50.180 61 97 6.5E-5 T 09-03-2017 BV404_RS04340 f96f33fc068d4ab2fd1d856ffbd89728 313 SUPERFAMILY SSF52172 183 310 1.17E-21 T 09-03-2017 IPR011006 CheY-like superfamily BV404_RS04340 f96f33fc068d4ab2fd1d856ffbd89728 313 PIRSF PIRSF002867 1 312 9.5E-105 T 09-03-2017 IPR024181 Chemotaxis response regulator CheV BV404_RS04340 f96f33fc068d4ab2fd1d856ffbd89728 313 Gene3D G3DSA:2.30.30.40 98 137 1.4E-4 T 09-03-2017 BV404_RS04340 f96f33fc068d4ab2fd1d856ffbd89728 313 Gene3D G3DSA:3.40.50.2300 183 310 9.8E-24 T 09-03-2017 BV404_RS04340 f96f33fc068d4ab2fd1d856ffbd89728 313 Pfam PF01584 CheW-like domain 21 160 1.0E-34 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 BV404_RS04340 f96f33fc068d4ab2fd1d856ffbd89728 313 Pfam PF00072 Response regulator receiver domain 186 306 1.0E-14 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS04340 f96f33fc068d4ab2fd1d856ffbd89728 313 SUPERFAMILY SSF50341 16 161 8.89E-34 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 BV404_RS04340 f96f33fc068d4ab2fd1d856ffbd89728 313 SMART SM00260 17 158 6.2E-27 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 BV404_RS10850 02d9dbdfcc112b02394b7f2780a4e3d5 197 ProSitePatterns PS01114 GPR1/FUN34/yaaH family signature. 7 16 - T 09-03-2017 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 BV404_RS10850 02d9dbdfcc112b02394b7f2780a4e3d5 197 Pfam PF01184 GPR1/FUN34/yaaH family 3 180 2.6E-35 T 09-03-2017 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 BV404_RS09325 ffe273b10d17a564da964908b191b397 240 SMART SM00857 3 142 2.0E-5 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 BV404_RS09325 ffe273b10d17a564da964908b191b397 240 Gene3D G3DSA:3.40.50.1390 1 111 3.1E-10 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 BV404_RS09325 ffe273b10d17a564da964908b191b397 240 SUPERFAMILY SSF53041 1 141 2.88E-12 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 BV404_RS09325 ffe273b10d17a564da964908b191b397 240 Pfam PF13384 Homeodomain-like domain 153 197 4.3E-7 T 09-03-2017 BV404_RS09325 ffe273b10d17a564da964908b191b397 240 Pfam PF00239 Resolvase, N terminal domain 4 140 1.8E-8 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 BV404_RS09325 ffe273b10d17a564da964908b191b397 240 Gene3D G3DSA:1.10.10.10 156 191 1.8E-4 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS06585 62d6548f276da63c42921cab88153260 568 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 380 4.3E-17 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS06585 62d6548f276da63c42921cab88153260 568 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 424 4.3E-17 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS06585 62d6548f276da63c42921cab88153260 568 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 405 4.3E-17 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS06585 62d6548f276da63c42921cab88153260 568 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 366 4.3E-17 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS06585 62d6548f276da63c42921cab88153260 568 SMART SM00448 452 563 8.4E-33 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS06585 62d6548f276da63c42921cab88153260 568 Gene3D G3DSA:3.40.50.2300 449 567 1.9E-39 T 09-03-2017 BV404_RS06585 62d6548f276da63c42921cab88153260 568 Gene3D G3DSA:1.10.287.130 196 255 1.9E-16 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS06585 62d6548f276da63c42921cab88153260 568 SUPERFAMILY SSF55874 258 425 4.85E-47 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS06585 62d6548f276da63c42921cab88153260 568 Gene3D G3DSA:3.30.565.10 256 425 2.8E-44 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS06585 62d6548f276da63c42921cab88153260 568 SMART SM00387 316 427 7.3E-38 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS06585 62d6548f276da63c42921cab88153260 568 SUPERFAMILY SSF52172 451 568 2.13E-35 T 09-03-2017 IPR011006 CheY-like superfamily BV404_RS06585 62d6548f276da63c42921cab88153260 568 SUPERFAMILY SSF47384 192 269 1.45E-19 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS06585 62d6548f276da63c42921cab88153260 568 SMART SM00388 204 269 8.5E-20 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS06585 62d6548f276da63c42921cab88153260 568 Pfam PF00072 Response regulator receiver domain 454 562 1.7E-27 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS06585 62d6548f276da63c42921cab88153260 568 Pfam PF00512 His Kinase A (phospho-acceptor) domain 206 269 1.8E-18 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS06585 62d6548f276da63c42921cab88153260 568 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 316 426 1.2E-29 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS13065 73d5261651295c387653e79d515dd580 261 PRINTS PR00502 NUDIX hydrolase family signature 156 170 6.3E-5 T 09-03-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 BV404_RS13065 73d5261651295c387653e79d515dd580 261 PRINTS PR00502 NUDIX hydrolase family signature 170 185 6.3E-5 T 09-03-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 BV404_RS13065 73d5261651295c387653e79d515dd580 261 Hamap MF_00297 NADH pyrophosphatase [nudC]. 1 259 41.993 T 09-03-2017 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 BV404_RS13065 73d5261651295c387653e79d515dd580 261 Pfam PF00293 NUDIX domain 134 233 3.2E-17 T 09-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 BV404_RS13065 73d5261651295c387653e79d515dd580 261 SUPERFAMILY SSF55811 56 245 1.57E-44 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 BV404_RS13065 73d5261651295c387653e79d515dd580 261 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 98 126 2.1E-9 T 09-03-2017 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 BV404_RS13065 73d5261651295c387653e79d515dd580 261 ProSitePatterns PS00893 Nudix box signature. 161 182 - T 09-03-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 BV404_RS13065 73d5261651295c387653e79d515dd580 261 Gene3D G3DSA:3.90.79.10 95 249 1.6E-41 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 BV404_RS07820 b3187961da1247aaaaa85c561977813e 327 Gene3D G3DSA:3.40.50.2300 195 323 6.3E-30 T 09-03-2017 BV404_RS07820 b3187961da1247aaaaa85c561977813e 327 PIRSF PIRSF002867 4 326 6.6E-102 T 09-03-2017 IPR024181 Chemotaxis response regulator CheV BV404_RS07820 b3187961da1247aaaaa85c561977813e 327 SUPERFAMILY SSF50341 10 168 8.63E-33 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 BV404_RS07820 b3187961da1247aaaaa85c561977813e 327 SMART SM00448 196 321 5.4E-25 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS07820 b3187961da1247aaaaa85c561977813e 327 Gene3D G3DSA:2.40.50.180 69 104 1.7E-4 T 09-03-2017 BV404_RS07820 b3187961da1247aaaaa85c561977813e 327 SUPERFAMILY SSF52172 196 324 1.24E-28 T 09-03-2017 IPR011006 CheY-like superfamily BV404_RS07820 b3187961da1247aaaaa85c561977813e 327 Pfam PF00072 Response regulator receiver domain 198 320 6.9E-23 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS07820 b3187961da1247aaaaa85c561977813e 327 Gene3D G3DSA:2.30.30.40 105 157 7.4E-12 T 09-03-2017 BV404_RS07820 b3187961da1247aaaaa85c561977813e 327 Pfam PF01584 CheW-like domain 40 165 2.7E-30 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 BV404_RS07820 b3187961da1247aaaaa85c561977813e 327 SMART SM00260 17 163 3.5E-26 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 BV404_RS02925 cda836502b36a6381757694661b74989 452 SUPERFAMILY SSF50156 91 186 1.31E-11 T 09-03-2017 IPR001478 PDZ domain GO:0005515 BV404_RS02925 cda836502b36a6381757694661b74989 452 Gene3D G3DSA:2.30.42.10 95 183 4.3E-12 T 09-03-2017 IPR001478 PDZ domain GO:0005515 BV404_RS02925 cda836502b36a6381757694661b74989 452 Gene3D G3DSA:2.30.42.10 200 291 7.3E-17 T 09-03-2017 IPR001478 PDZ domain GO:0005515 BV404_RS02925 cda836502b36a6381757694661b74989 452 SMART SM00228 212 281 9.5E-7 T 09-03-2017 IPR001478 PDZ domain GO:0005515 BV404_RS02925 cda836502b36a6381757694661b74989 452 SMART SM00228 115 186 0.13 T 09-03-2017 IPR001478 PDZ domain GO:0005515 BV404_RS02925 cda836502b36a6381757694661b74989 452 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 4 452 2.5E-136 T 09-03-2017 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 BV404_RS02925 cda836502b36a6381757694661b74989 452 Pfam PF13180 PDZ domain 226 288 1.3E-6 T 09-03-2017 IPR001478 PDZ domain GO:0005515 BV404_RS02925 cda836502b36a6381757694661b74989 452 Pfam PF02163 Peptidase family M50 11 440 2.2E-86 T 09-03-2017 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033 BV404_RS02925 cda836502b36a6381757694661b74989 452 SUPERFAMILY SSF50156 197 291 8.28E-16 T 09-03-2017 IPR001478 PDZ domain GO:0005515 BV404_RS03020 c53476e7ed9d3428bf1699e8505a8125 246 Gene3D G3DSA:3.30.420.10 9 191 1.9E-65 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 BV404_RS03020 c53476e7ed9d3428bf1699e8505a8125 246 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 11 229 6.1E-85 T 09-03-2017 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS03020 c53476e7ed9d3428bf1699e8505a8125 246 SMART SM00479 11 189 4.6E-54 T 09-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III BV404_RS03020 c53476e7ed9d3428bf1699e8505a8125 246 Pfam PF00929 Exonuclease 13 180 9.8E-42 T 09-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III BV404_RS03020 c53476e7ed9d3428bf1699e8505a8125 246 SUPERFAMILY SSF53098 11 190 1.43E-54 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 BV404_RS03020 c53476e7ed9d3428bf1699e8505a8125 246 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 11 246 9.2E-102 T 09-03-2017 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS00750 35c7d597660cd0bf8b8f71747665259f 826 Pfam PF17092 Penicillin-binding protein OB-like domain 316 431 4.6E-32 T 09-03-2017 IPR031376 Penicillin-binding protein, OB-like domain BV404_RS00750 35c7d597660cd0bf8b8f71747665259f 826 Gene3D G3DSA:3.40.710.10 428 810 2.2E-129 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like BV404_RS00750 35c7d597660cd0bf8b8f71747665259f 826 Gene3D G3DSA:3.40.710.10 232 313 2.2E-129 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like BV404_RS00750 35c7d597660cd0bf8b8f71747665259f 826 Gene3D G3DSA:2.40.50.140 347 427 7.1E-20 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS00750 35c7d597660cd0bf8b8f71747665259f 826 Pfam PF00912 Transglycosylase 55 229 1.2E-63 T 09-03-2017 IPR001264 Glycosyl transferase, family 51 BV404_RS00750 35c7d597660cd0bf8b8f71747665259f 826 Pfam PF00905 Penicillin binding protein transpeptidase domain 434 713 4.0E-31 T 09-03-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 BV404_RS00750 35c7d597660cd0bf8b8f71747665259f 826 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 755 4.2E-172 T 09-03-2017 BV404_RS00750 35c7d597660cd0bf8b8f71747665259f 826 SUPERFAMILY SSF53955 43 256 2.67E-78 T 09-03-2017 IPR023346 Lysozyme-like domain BV404_RS00750 35c7d597660cd0bf8b8f71747665259f 826 Gene3D G3DSA:1.10.3810.10 55 231 2.3E-74 T 09-03-2017 BV404_RS00750 35c7d597660cd0bf8b8f71747665259f 826 SUPERFAMILY SSF56601 211 233 9.5E-117 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like BV404_RS00750 35c7d597660cd0bf8b8f71747665259f 826 SUPERFAMILY SSF56601 428 810 9.5E-117 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like BV404_RS00750 35c7d597660cd0bf8b8f71747665259f 826 SUPERFAMILY SSF56601 262 313 9.5E-117 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like BV404_RS06950 057c9148615ba89c68d0779c2c7ec167 173 Gene3D G3DSA:3.90.1720.10 44 166 3.1E-40 T 09-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain BV404_RS06950 057c9148615ba89c68d0779c2c7ec167 173 SUPERFAMILY SSF54001 52 167 9.32E-39 T 09-03-2017 BV404_RS06950 057c9148615ba89c68d0779c2c7ec167 173 Pfam PF00877 NlpC/P60 family 61 165 8.3E-30 T 09-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain BV404_RS06155 3acfe32c06c5184071d599538a5f781c 376 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 173 350 1.4E-6 T 09-03-2017 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 BV404_RS06155 3acfe32c06c5184071d599538a5f781c 376 Gene3D G3DSA:3.20.20.210 4 376 9.3E-110 T 09-03-2017 BV404_RS06155 3acfe32c06c5184071d599538a5f781c 376 SUPERFAMILY SSF51726 9 376 8.24E-75 T 09-03-2017 BV404_RS02575 a520039fafcf6032de26c072db8717e8 324 SUPERFAMILY SSF55174 17 69 4.04E-11 T 09-03-2017 BV404_RS02575 a520039fafcf6032de26c072db8717e8 324 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 09-03-2017 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 BV404_RS02575 a520039fafcf6032de26c072db8717e8 324 SUPERFAMILY SSF55120 77 315 3.12E-79 T 09-03-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 BV404_RS02575 a520039fafcf6032de26c072db8717e8 324 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 14 313 1.1E-105 T 09-03-2017 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 BV404_RS02575 a520039fafcf6032de26c072db8717e8 324 Gene3D G3DSA:3.10.290.10 18 69 1.1E-12 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 BV404_RS02575 a520039fafcf6032de26c072db8717e8 324 Pfam PF00849 RNA pseudouridylate synthase 92 241 1.4E-30 T 09-03-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BV404_RS02575 a520039fafcf6032de26c072db8717e8 324 Pfam PF01479 S4 domain 18 63 6.6E-8 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 BV404_RS02575 a520039fafcf6032de26c072db8717e8 324 SMART SM00363 18 83 4.2E-8 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 BV404_RS09540 d77650d274c75a957e53f2636deb559f 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 100 5.4E-35 T 09-03-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family BV404_RS09540 d77650d274c75a957e53f2636deb559f 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 23.43 T 09-03-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family BV404_RS09540 d77650d274c75a957e53f2636deb559f 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 105 3.8E-39 T 09-03-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family BV404_RS09540 d77650d274c75a957e53f2636deb559f 109 SUPERFAMILY SSF82607 11 103 2.62E-36 T 09-03-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family BV404_RS09540 d77650d274c75a957e53f2636deb559f 109 PIRSF PIRSF004555 3 109 4.0E-39 T 09-03-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family BV404_RS09540 d77650d274c75a957e53f2636deb559f 109 Gene3D G3DSA:3.30.1310.10 1 109 9.9E-51 T 09-03-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family BV404_RS02965 f065dae0770bad7576481ff42c99f5f9 1159 Gene3D G3DSA:1.10.150.280 836 883 1.0E-5 T 09-03-2017 BV404_RS02965 f065dae0770bad7576481ff42c99f5f9 1159 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 290 735 1.3E-176 T 09-03-2017 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS02965 f065dae0770bad7576481ff42c99f5f9 1159 SMART SM00481 7 74 1.2E-25 T 09-03-2017 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 BV404_RS02965 f065dae0770bad7576481ff42c99f5f9 1159 Gene3D G3DSA:3.20.20.140 5 257 3.7E-21 T 09-03-2017 BV404_RS02965 f065dae0770bad7576481ff42c99f5f9 1159 Gene3D G3DSA:2.40.50.140 988 1076 5.5E-9 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS02965 f065dae0770bad7576481ff42c99f5f9 1159 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1030 0.0 T 09-03-2017 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS02965 f065dae0770bad7576481ff42c99f5f9 1159 Pfam PF01336 OB-fold nucleic acid binding domain 999 1071 2.1E-10 T 09-03-2017 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 BV404_RS02965 f065dae0770bad7576481ff42c99f5f9 1159 SUPERFAMILY SSF89550 5 263 5.89E-16 T 09-03-2017 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 BV404_RS02965 f065dae0770bad7576481ff42c99f5f9 1159 Pfam PF02811 PHP domain 8 172 1.3E-42 T 09-03-2017 IPR004013 PHP domain GO:0003824 BV404_RS02965 f065dae0770bad7576481ff42c99f5f9 1159 Pfam PF14579 Helix-hairpin-helix motif 808 897 1.5E-24 T 09-03-2017 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS13985 d931db69c1b2797674827fecc7375d41 426 SUPERFAMILY SSF53335 139 424 4.11E-78 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS13985 d931db69c1b2797674827fecc7375d41 426 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 313 324 - T 09-03-2017 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 BV404_RS13985 d931db69c1b2797674827fecc7375d41 426 Gene3D G3DSA:3.30.70.1170 170 227 2.5E-26 T 09-03-2017 BV404_RS13985 d931db69c1b2797674827fecc7375d41 426 Gene3D G3DSA:3.40.50.150 229 424 1.9E-59 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS13985 d931db69c1b2797674827fecc7375d41 426 Pfam PF01189 16S rRNA methyltransferase RsmB/F 238 422 2.1E-69 T 09-03-2017 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 BV404_RS13985 d931db69c1b2797674827fecc7375d41 426 Gene3D G3DSA:1.10.940.10 1 144 4.6E-44 T 09-03-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 BV404_RS13985 d931db69c1b2797674827fecc7375d41 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 314 326 6.7E-31 T 09-03-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 BV404_RS13985 d931db69c1b2797674827fecc7375d41 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 407 424 6.7E-31 T 09-03-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 BV404_RS13985 d931db69c1b2797674827fecc7375d41 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 219 233 6.7E-31 T 09-03-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 BV404_RS13985 d931db69c1b2797674827fecc7375d41 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 248 258 6.7E-31 T 09-03-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 BV404_RS13985 d931db69c1b2797674827fecc7375d41 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 364 380 6.7E-31 T 09-03-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 BV404_RS13985 d931db69c1b2797674827fecc7375d41 426 Gene3D G3DSA:1.10.287.730 145 169 5.8E-15 T 09-03-2017 BV404_RS13985 d931db69c1b2797674827fecc7375d41 426 Pfam PF01029 NusB family 1 123 4.1E-25 T 09-03-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 BV404_RS13985 d931db69c1b2797674827fecc7375d41 426 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 4 426 8.9E-151 T 09-03-2017 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 BV404_RS13985 d931db69c1b2797674827fecc7375d41 426 SUPERFAMILY SSF48013 1 146 4.71E-37 T 09-03-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 BV404_RS10885 6f45e29e16027ec142be0065bc72788f 495 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 462 4.7E-180 T 09-03-2017 IPR016484 GTP-binding protein EngA GO:0005525 BV404_RS10885 6f45e29e16027ec142be0065bc72788f 495 Gene3D G3DSA:3.40.50.300 2 171 1.1E-48 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS10885 6f45e29e16027ec142be0065bc72788f 495 Gene3D G3DSA:3.40.50.300 202 387 1.9E-54 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS10885 6f45e29e16027ec142be0065bc72788f 495 Gene3D G3DSA:3.30.300.20 388 464 2.1E-23 T 09-03-2017 IPR015946 K homology domain-like, alpha/beta BV404_RS10885 6f45e29e16027ec142be0065bc72788f 495 Hamap MF_00195 GTPase Der [der]. 2 465 39.028 T 09-03-2017 IPR016484 GTP-binding protein EngA GO:0005525 BV404_RS10885 6f45e29e16027ec142be0065bc72788f 495 SMART SM00382 205 348 0.31 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS10885 6f45e29e16027ec142be0065bc72788f 495 SMART SM00382 1 173 2.0 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS10885 6f45e29e16027ec142be0065bc72788f 495 SUPERFAMILY SSF52540 4 169 6.95E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS10885 6f45e29e16027ec142be0065bc72788f 495 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.2E-9 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 BV404_RS10885 6f45e29e16027ec142be0065bc72788f 495 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 1.2E-9 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 BV404_RS10885 6f45e29e16027ec142be0065bc72788f 495 PIRSF PIRSF006485 1 470 4.6E-181 T 09-03-2017 IPR016484 GTP-binding protein EngA GO:0005525 BV404_RS10885 6f45e29e16027ec142be0065bc72788f 495 Pfam PF01926 50S ribosome-binding GTPase 209 326 1.0E-24 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 BV404_RS10885 6f45e29e16027ec142be0065bc72788f 495 Pfam PF01926 50S ribosome-binding GTPase 5 119 2.7E-27 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 BV404_RS10885 6f45e29e16027ec142be0065bc72788f 495 SUPERFAMILY SSF52540 204 468 3.23E-62 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS10885 6f45e29e16027ec142be0065bc72788f 495 SUPERFAMILY SSF52540 142 169 3.23E-62 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS10885 6f45e29e16027ec142be0065bc72788f 495 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 382 461 4.6E-26 T 09-03-2017 IPR032859 GTPase Der, C-terminal KH-domain-like BV404_RS10885 6f45e29e16027ec142be0065bc72788f 495 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 205 371 2.8E-24 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 BV404_RS10885 6f45e29e16027ec142be0065bc72788f 495 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 156 1.1E-20 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 BV404_RS06865 bc7008a83c94b27a87e5742ab1ef9041 261 Gene3D G3DSA:3.60.15.10 4 222 8.0E-33 T 09-03-2017 IPR001279 Metallo-beta-lactamase BV404_RS06865 bc7008a83c94b27a87e5742ab1ef9041 261 Pfam PF00753 Metallo-beta-lactamase superfamily 9 209 8.9E-20 T 09-03-2017 IPR001279 Metallo-beta-lactamase BV404_RS06865 bc7008a83c94b27a87e5742ab1ef9041 261 SMART SM00849 10 209 2.3E-21 T 09-03-2017 IPR001279 Metallo-beta-lactamase BV404_RS06865 bc7008a83c94b27a87e5742ab1ef9041 261 SUPERFAMILY SSF56281 7 227 2.84E-38 T 09-03-2017 IPR001279 Metallo-beta-lactamase BV404_RS10750 21f2256a707d01cc25657433933a40ca 200 Gene3D G3DSA:2.30.22.10 144 200 4.7E-27 T 09-03-2017 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 BV404_RS10750 21f2256a707d01cc25657433933a40ca 200 Gene3D G3DSA:3.90.20.20 44 143 9.5E-32 T 09-03-2017 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 BV404_RS10750 21f2256a707d01cc25657433933a40ca 200 Hamap MF_01151 Protein GrpE [grpE]. 2 200 22.491 T 09-03-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BV404_RS10750 21f2256a707d01cc25657433933a40ca 200 ProSitePatterns PS01071 grpE protein signature. 155 198 - T 09-03-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BV404_RS10750 21f2256a707d01cc25657433933a40ca 200 Pfam PF01025 GrpE 37 200 5.3E-55 T 09-03-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BV404_RS10750 21f2256a707d01cc25657433933a40ca 200 PRINTS PR00773 GrpE protein signature 69 85 4.5E-29 T 09-03-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BV404_RS10750 21f2256a707d01cc25657433933a40ca 200 PRINTS PR00773 GrpE protein signature 97 112 4.5E-29 T 09-03-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BV404_RS10750 21f2256a707d01cc25657433933a40ca 200 PRINTS PR00773 GrpE protein signature 152 167 4.5E-29 T 09-03-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BV404_RS10750 21f2256a707d01cc25657433933a40ca 200 PRINTS PR00773 GrpE protein signature 179 198 4.5E-29 T 09-03-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BV404_RS10750 21f2256a707d01cc25657433933a40ca 200 SUPERFAMILY SSF58014 46 144 4.05E-29 T 09-03-2017 BV404_RS10750 21f2256a707d01cc25657433933a40ca 200 SUPERFAMILY SSF51064 145 200 1.83E-19 T 09-03-2017 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 BV404_RS06255 72634035fa8fb114bd81177effb8ceda 233 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 65 225 1.2E-48 T 09-03-2017 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 BV404_RS06255 72634035fa8fb114bd81177effb8ceda 233 SUPERFAMILY SSF55120 60 228 1.1E-44 T 09-03-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 BV404_RS06255 72634035fa8fb114bd81177effb8ceda 233 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 98 112 - T 09-03-2017 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 BV404_RS06255 72634035fa8fb114bd81177effb8ceda 233 Pfam PF00849 RNA pseudouridylate synthase 61 193 1.6E-16 T 09-03-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BV404_RS06255 72634035fa8fb114bd81177effb8ceda 233 Gene3D G3DSA:3.10.290.10 1 63 9.1E-18 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 BV404_RS06255 72634035fa8fb114bd81177effb8ceda 233 Pfam PF01479 S4 domain 1 42 3.8E-8 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 BV404_RS06255 72634035fa8fb114bd81177effb8ceda 233 SMART SM00363 1 62 1.7E-7 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 BV404_RS06255 72634035fa8fb114bd81177effb8ceda 233 SUPERFAMILY SSF55174 1 80 4.12E-11 T 09-03-2017 BV404_RS13525 85a58e845a34392455bf3d68e608603b 388 SUPERFAMILY SSF48179 191 287 3.06E-30 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 BV404_RS13525 85a58e845a34392455bf3d68e608603b 388 Gene3D G3DSA:3.40.50.720 285 388 2.4E-50 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS13525 85a58e845a34392455bf3d68e608603b 388 SUPERFAMILY SSF52413 283 387 1.07E-28 T 09-03-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BV404_RS13525 85a58e845a34392455bf3d68e608603b 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 168 1.2E-33 T 09-03-2017 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BV404_RS13525 85a58e845a34392455bf3d68e608603b 388 Gene3D G3DSA:1.10.1040.10 198 284 1.1E-34 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BV404_RS13525 85a58e845a34392455bf3d68e608603b 388 PIRSF PIRSF000124 1 388 9.7E-141 T 09-03-2017 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 BV404_RS13525 85a58e845a34392455bf3d68e608603b 388 SUPERFAMILY SSF51735 1 194 1.34E-48 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS13525 85a58e845a34392455bf3d68e608603b 388 PIRSF PIRSF500134 1 344 1.1E-124 T 09-03-2017 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346 BV404_RS13525 85a58e845a34392455bf3d68e608603b 388 Gene3D G3DSA:3.40.50.720 1 197 1.7E-68 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS13525 85a58e845a34392455bf3d68e608603b 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 2.7E-105 T 09-03-2017 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 BV404_RS13525 85a58e845a34392455bf3d68e608603b 388 SMART SM00984 300 387 4.8E-16 T 09-03-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BV404_RS13525 85a58e845a34392455bf3d68e608603b 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 378 8.9E-10 T 09-03-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BV404_RS13525 85a58e845a34392455bf3d68e608603b 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 4.7E-26 T 09-03-2017 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BV404_RS10175 c2bef6243bd00160185e882cad225af2 349 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 31 336 2.5E-92 T 09-03-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 BV404_RS10175 c2bef6243bd00160185e882cad225af2 349 Gene3D G3DSA:2.40.50.100 150 181 1.1E-18 T 09-03-2017 BV404_RS10175 c2bef6243bd00160185e882cad225af2 349 Gene3D G3DSA:2.40.50.100 56 89 1.1E-18 T 09-03-2017 BV404_RS10175 c2bef6243bd00160185e882cad225af2 349 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 41 255 3.3E-32 T 09-03-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BV404_RS10175 c2bef6243bd00160185e882cad225af2 349 SUPERFAMILY SSF111369 44 261 1.14E-40 T 09-03-2017 BV404_RS12505 eff759d62865530c11339e5f1d1e22fc 145 Pfam PF00582 Universal stress protein family 1 142 1.9E-35 T 09-03-2017 IPR006016 UspA GO:0006950 BV404_RS12505 eff759d62865530c11339e5f1d1e22fc 145 Gene3D G3DSA:3.40.50.620 1 144 3.4E-40 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS12505 eff759d62865530c11339e5f1d1e22fc 145 SUPERFAMILY SSF52402 2 143 1.56E-38 T 09-03-2017 BV404_RS12505 eff759d62865530c11339e5f1d1e22fc 145 PRINTS PR01438 Universal stress protein signature 102 114 3.4E-12 T 09-03-2017 IPR006015 Universal stress protein A BV404_RS12505 eff759d62865530c11339e5f1d1e22fc 145 PRINTS PR01438 Universal stress protein signature 2 20 3.4E-12 T 09-03-2017 IPR006015 Universal stress protein A BV404_RS12505 eff759d62865530c11339e5f1d1e22fc 145 PRINTS PR01438 Universal stress protein signature 120 142 3.4E-12 T 09-03-2017 IPR006015 Universal stress protein A BV404_RS12505 eff759d62865530c11339e5f1d1e22fc 145 PIRSF PIRSF006276 1 145 2.7E-21 T 09-03-2017 IPR006015 Universal stress protein A BV404_RS08735 693aa1a8e2a34740dfd587bab0961afc 483 Gene3D G3DSA:3.40.309.10 268 452 4.7E-67 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 BV404_RS08735 693aa1a8e2a34740dfd587bab0961afc 483 Pfam PF00171 Aldehyde dehydrogenase family 19 476 1.5E-169 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 BV404_RS08735 693aa1a8e2a34740dfd587bab0961afc 483 SUPERFAMILY SSF53720 5 479 6.81E-172 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 BV404_RS08735 693aa1a8e2a34740dfd587bab0961afc 483 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 30 475 8.9E-206 T 09-03-2017 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 BV404_RS08735 693aa1a8e2a34740dfd587bab0961afc 483 Gene3D G3DSA:3.40.605.10 10 267 1.4E-102 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 BV404_RS08735 693aa1a8e2a34740dfd587bab0961afc 483 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 09-03-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 BV404_RS08735 693aa1a8e2a34740dfd587bab0961afc 483 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 09-03-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 BV404_RS05760 a0a305a4ff3ca644cef7319315be479b 405 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 193 203 - T 09-03-2017 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 BV404_RS05760 a0a305a4ff3ca644cef7319315be479b 405 Gene3D G3DSA:3.90.550.10 324 367 1.8E-72 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases BV404_RS05760 a0a305a4ff3ca644cef7319315be479b 405 Gene3D G3DSA:3.90.550.10 6 282 1.8E-72 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases BV404_RS05760 a0a305a4ff3ca644cef7319315be479b 405 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 95 103 - T 09-03-2017 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 BV404_RS05760 a0a305a4ff3ca644cef7319315be479b 405 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 09-03-2017 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 BV404_RS05760 a0a305a4ff3ca644cef7319315be479b 405 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 403 48.853 T 09-03-2017 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 BV404_RS05760 a0a305a4ff3ca644cef7319315be479b 405 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 4 377 2.6E-149 T 09-03-2017 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 BV404_RS05760 a0a305a4ff3ca644cef7319315be479b 405 Pfam PF00483 Nucleotidyl transferase 6 273 6.8E-62 T 09-03-2017 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 BV404_RS05760 a0a305a4ff3ca644cef7319315be479b 405 SUPERFAMILY SSF51161 293 402 5.41E-19 T 09-03-2017 IPR011004 Trimeric LpxA-like BV404_RS05760 a0a305a4ff3ca644cef7319315be479b 405 SUPERFAMILY SSF53448 4 275 5.16E-69 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases BV404_RS05760 a0a305a4ff3ca644cef7319315be479b 405 SUPERFAMILY SSF53448 341 357 5.16E-69 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases BV404_RS01215 fa30ff6aeee58c444411e575090163d9 329 Gene3D G3DSA:3.40.190.10 180 286 5.3E-8 T 09-03-2017 BV404_RS01215 fa30ff6aeee58c444411e575090163d9 329 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 12 328 5.0E-150 T 09-03-2017 IPR005967 Proteobacterial thiamine ABC transporter, periplasmic binding protein GO:0005524|GO:0015888|GO:0030288|GO:0048502 BV404_RS01215 fa30ff6aeee58c444411e575090163d9 329 Pfam PF13343 Bacterial extracellular solute-binding protein 76 294 6.7E-20 T 09-03-2017 BV404_RS01215 fa30ff6aeee58c444411e575090163d9 329 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 20 323 2.0E-145 T 09-03-2017 IPR005948 Thiamine ABC transporter periplasmic binding protein GO:0005215|GO:0006810|GO:0015888|GO:0030288|GO:0030975 BV404_RS01215 fa30ff6aeee58c444411e575090163d9 329 SUPERFAMILY SSF53850 23 324 5.1E-66 T 09-03-2017 BV404_RS01215 fa30ff6aeee58c444411e575090163d9 329 Gene3D G3DSA:3.40.190.10 23 173 3.6E-29 T 09-03-2017 BV404_RS06655 6962e6e892389887bb82e073b441b25c 335 SUPERFAMILY SSF53850 110 320 2.17E-39 T 09-03-2017 BV404_RS06655 6962e6e892389887bb82e073b441b25c 335 Gene3D G3DSA:1.10.10.10 25 105 6.8E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS06655 6962e6e892389887bb82e073b441b25c 335 SUPERFAMILY SSF46785 25 134 9.58E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS06655 6962e6e892389887bb82e073b441b25c 335 Gene3D G3DSA:3.40.190.10 114 200 5.6E-20 T 09-03-2017 BV404_RS06655 6962e6e892389887bb82e073b441b25c 335 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 4.6E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS06655 6962e6e892389887bb82e073b441b25c 335 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 52 62 4.6E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS06655 6962e6e892389887bb82e073b441b25c 335 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 62 73 4.6E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS06655 6962e6e892389887bb82e073b441b25c 335 Pfam PF03466 LysR substrate binding domain 110 316 1.4E-35 T 09-03-2017 IPR005119 LysR, substrate-binding BV404_RS06655 6962e6e892389887bb82e073b441b25c 335 Gene3D G3DSA:3.40.190.10 201 284 1.4E-14 T 09-03-2017 BV404_RS06655 6962e6e892389887bb82e073b441b25c 335 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 26 84 5.3E-20 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS01990 cd61f374b73da91600302a3edf15897f 222 Gene3D G3DSA:3.40.1050.10 1 213 1.7E-78 T 09-03-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 BV404_RS01990 cd61f374b73da91600302a3edf15897f 222 Pfam PF00484 Carbonic anhydrase 38 188 2.8E-49 T 09-03-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 BV404_RS01990 cd61f374b73da91600302a3edf15897f 222 SMART SM00947 30 192 7.7E-67 T 09-03-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 BV404_RS01990 cd61f374b73da91600302a3edf15897f 222 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 09-03-2017 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 BV404_RS01990 cd61f374b73da91600302a3edf15897f 222 SUPERFAMILY SSF53056 2 214 5.23E-75 T 09-03-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 BV404_RS01990 cd61f374b73da91600302a3edf15897f 222 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 09-03-2017 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 BV404_RS03455 7215874bb2732cfc931c450cfec57afd 292 Gene3D G3DSA:3.20.20.70 1 291 5.8E-114 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS03455 7215874bb2732cfc931c450cfec57afd 292 SUPERFAMILY SSF51569 2 288 6.18E-98 T 09-03-2017 BV404_RS03455 7215874bb2732cfc931c450cfec57afd 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 287 5.2E-117 T 09-03-2017 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BV404_RS03455 7215874bb2732cfc931c450cfec57afd 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 64.644 T 09-03-2017 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BV404_RS03455 7215874bb2732cfc931c450cfec57afd 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 2.0E-34 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 BV404_RS03455 7215874bb2732cfc931c450cfec57afd 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 2.0E-34 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 BV404_RS03455 7215874bb2732cfc931c450cfec57afd 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 2.0E-34 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 BV404_RS03455 7215874bb2732cfc931c450cfec57afd 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 2.0E-34 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 BV404_RS03455 7215874bb2732cfc931c450cfec57afd 292 Pfam PF00701 Dihydrodipicolinate synthetase family 2 288 1.3E-109 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 BV404_RS03455 7215874bb2732cfc931c450cfec57afd 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 09-03-2017 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BV404_RS03455 7215874bb2732cfc931c450cfec57afd 292 SMART SM01130 1 290 1.7E-137 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 BV404_RS03455 7215874bb2732cfc931c450cfec57afd 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 09-03-2017 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BV404_RS03455 7215874bb2732cfc931c450cfec57afd 292 PIRSF PIRSF001365 1 291 1.2E-91 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 BV404_RS13145 13cd29810d5833c2d08eb9e885a75630 307 Hamap MF_00215 Pantothenate kinase [coaA]. 1 307 178.026 T 09-03-2017 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 BV404_RS13145 13cd29810d5833c2d08eb9e885a75630 307 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 82 237 8.5E-14 T 09-03-2017 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 BV404_RS13145 13cd29810d5833c2d08eb9e885a75630 307 SUPERFAMILY SSF52540 3 307 3.32E-72 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS13145 13cd29810d5833c2d08eb9e885a75630 307 PIRSF PIRSF000545 1 307 3.6E-145 T 09-03-2017 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 BV404_RS13145 13cd29810d5833c2d08eb9e885a75630 307 Gene3D G3DSA:3.40.50.300 2 307 7.1E-108 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS13145 13cd29810d5833c2d08eb9e885a75630 307 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 3 307 5.9E-147 T 09-03-2017 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 BV404_RS08065 b588879492b3da40d54d0414821a39cb 97 Gene3D G3DSA:4.10.520.10 2 93 2.1E-36 T 09-03-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 BV404_RS08065 b588879492b3da40d54d0414821a39cb 97 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 09-03-2017 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 BV404_RS08065 b588879492b3da40d54d0414821a39cb 97 SUPERFAMILY SSF47729 3 95 4.56E-32 T 09-03-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 BV404_RS08065 b588879492b3da40d54d0414821a39cb 97 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 5.8E-17 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 BV404_RS08065 b588879492b3da40d54d0414821a39cb 97 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 5.8E-17 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 BV404_RS08065 b588879492b3da40d54d0414821a39cb 97 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 5.8E-17 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 BV404_RS08065 b588879492b3da40d54d0414821a39cb 97 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 30.628 T 09-03-2017 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 BV404_RS08065 b588879492b3da40d54d0414821a39cb 97 Pfam PF00216 Bacterial DNA-binding protein 3 91 2.1E-31 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 BV404_RS08065 b588879492b3da40d54d0414821a39cb 97 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 94 2.1E-50 T 09-03-2017 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 BV404_RS08065 b588879492b3da40d54d0414821a39cb 97 SMART SM00411 3 92 1.7E-39 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 BV404_RS07210 4f7a5c900fd0348359f76214597fe999 685 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 137 492 3.6E-111 T 09-03-2017 IPR008766 Replication gene A protein GO:0006260 BV404_RS02525 6b564ee49f6bcc8ad9f32905a4ec61f4 555 Pfam PF12848 ABC transporter 230 306 6.7E-13 T 09-03-2017 IPR032781 ABC-transporter extension domain BV404_RS02525 6b564ee49f6bcc8ad9f32905a4ec61f4 555 Gene3D G3DSA:3.40.50.300 322 532 1.3E-47 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS02525 6b564ee49f6bcc8ad9f32905a4ec61f4 555 Gene3D G3DSA:3.40.50.300 8 278 1.3E-52 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS02525 6b564ee49f6bcc8ad9f32905a4ec61f4 555 Pfam PF00005 ABC transporter 22 191 1.5E-28 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS02525 6b564ee49f6bcc8ad9f32905a4ec61f4 555 Pfam PF00005 ABC transporter 340 473 1.5E-24 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS02525 6b564ee49f6bcc8ad9f32905a4ec61f4 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 3 553 3.7E-291 T 09-03-2017 IPR022374 ABC transporter, ATP-binding protein, ChvD BV404_RS02525 6b564ee49f6bcc8ad9f32905a4ec61f4 555 SMART SM00382 31 236 2.4E-8 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS02525 6b564ee49f6bcc8ad9f32905a4ec61f4 555 SMART SM00382 348 518 1.4E-9 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS02525 6b564ee49f6bcc8ad9f32905a4ec61f4 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS02525 6b564ee49f6bcc8ad9f32905a4ec61f4 555 SUPERFAMILY SSF52540 304 525 1.18E-46 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS02525 6b564ee49f6bcc8ad9f32905a4ec61f4 555 SUPERFAMILY SSF52540 9 243 1.5E-48 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS00715 84c95b561d76c8411331dc4efa4fef12 334 SMART SM00859 3 146 2.7E-42 T 09-03-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 BV404_RS00715 84c95b561d76c8411331dc4efa4fef12 334 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 144 8.3E-30 T 09-03-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 BV404_RS00715 84c95b561d76c8411331dc4efa4fef12 334 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 164 311 5.5E-14 T 09-03-2017 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BV404_RS00715 84c95b561d76c8411331dc4efa4fef12 334 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 36.361 T 09-03-2017 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BV404_RS00715 84c95b561d76c8411331dc4efa4fef12 334 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 333 3.9E-118 T 09-03-2017 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BV404_RS00715 84c95b561d76c8411331dc4efa4fef12 334 SUPERFAMILY SSF55347 154 308 5.49E-49 T 09-03-2017 BV404_RS00715 84c95b561d76c8411331dc4efa4fef12 334 Gene3D G3DSA:3.30.360.10 163 308 4.8E-50 T 09-03-2017 BV404_RS00715 84c95b561d76c8411331dc4efa4fef12 334 SUPERFAMILY SSF51735 1 171 1.88E-39 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS00715 84c95b561d76c8411331dc4efa4fef12 334 Gene3D G3DSA:3.40.50.720 1 162 6.0E-54 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS00715 84c95b561d76c8411331dc4efa4fef12 334 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 09-03-2017 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BV404_RS03835 78b2f190fc77eead9c54e003a515a6a4 1116 Gene3D G3DSA:1.10.10.60 1007 1064 2.2E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS03835 78b2f190fc77eead9c54e003a515a6a4 1116 SMART SM00342 1028 1110 5.7E-29 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BV404_RS03835 78b2f190fc77eead9c54e003a515a6a4 1116 Pfam PF12833 Helix-turn-helix domain 1035 1110 2.1E-24 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BV404_RS03835 78b2f190fc77eead9c54e003a515a6a4 1116 Pfam PF07494 Two component regulator propeller 286 308 6.7E-4 T 09-03-2017 IPR011110 Two component regulator propeller BV404_RS03835 78b2f190fc77eead9c54e003a515a6a4 1116 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 1094 1110 1.8E-5 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BV404_RS03835 78b2f190fc77eead9c54e003a515a6a4 1116 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 1079 1094 1.8E-5 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BV404_RS03835 78b2f190fc77eead9c54e003a515a6a4 1116 SUPERFAMILY SSF50969 191 449 4.94E-7 T 09-03-2017 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like BV404_RS03835 78b2f190fc77eead9c54e003a515a6a4 1116 SUPERFAMILY SSF46689 1064 1111 2.15E-11 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS03835 78b2f190fc77eead9c54e003a515a6a4 1116 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 1065 1106 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BV404_RS03835 78b2f190fc77eead9c54e003a515a6a4 1116 Gene3D G3DSA:1.10.10.60 1065 1109 2.2E-14 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS03835 78b2f190fc77eead9c54e003a515a6a4 1116 Gene3D G3DSA:2.120.10.30 209 330 1.2E-5 T 09-03-2017 IPR011042 Six-bladed beta-propeller, TolB-like BV404_RS08025 2585b0c59be789352e46ad184964dd57 902 SUPERFAMILY SSF55073 484 611 2.75E-12 T 09-03-2017 IPR029787 Nucleotide cyclase BV404_RS08025 2585b0c59be789352e46ad184964dd57 902 Gene3D G3DSA:3.30.70.270 480 596 7.3E-14 T 09-03-2017 BV404_RS08025 2585b0c59be789352e46ad184964dd57 902 Pfam PF00990 Diguanylate cyclase, GGDEF domain 479 579 6.3E-11 T 09-03-2017 IPR000160 GGDEF domain BV404_RS08025 2585b0c59be789352e46ad184964dd57 902 SMART SM00267 467 630 5.4E-5 T 09-03-2017 IPR000160 GGDEF domain BV404_RS08025 2585b0c59be789352e46ad184964dd57 902 Pfam PF00563 EAL domain 651 889 3.2E-71 T 09-03-2017 IPR001633 EAL domain BV404_RS08025 2585b0c59be789352e46ad184964dd57 902 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 356 472 6.1E-10 T 09-03-2017 IPR000014 PAS domain BV404_RS08025 2585b0c59be789352e46ad184964dd57 902 Pfam PF13426 PAS domain 368 466 4.6E-10 T 09-03-2017 IPR000014 PAS domain BV404_RS08025 2585b0c59be789352e46ad184964dd57 902 Pfam PF05228 CHASE4 domain 59 207 5.8E-28 T 09-03-2017 IPR007892 CHASE4 BV404_RS08025 2585b0c59be789352e46ad184964dd57 902 SMART SM00052 645 894 1.1E-97 T 09-03-2017 IPR001633 EAL domain BV404_RS08025 2585b0c59be789352e46ad184964dd57 902 Gene3D G3DSA:3.30.450.20 346 464 2.6E-14 T 09-03-2017 BV404_RS08025 2585b0c59be789352e46ad184964dd57 902 SUPERFAMILY SSF141868 651 897 1.44E-78 T 09-03-2017 IPR001633 EAL domain BV404_RS08025 2585b0c59be789352e46ad184964dd57 902 SMART SM00091 357 423 0.0027 T 09-03-2017 IPR000014 PAS domain BV404_RS08025 2585b0c59be789352e46ad184964dd57 902 Gene3D G3DSA:3.20.20.450 650 898 1.5E-86 T 09-03-2017 IPR001633 EAL domain BV404_RS08025 2585b0c59be789352e46ad184964dd57 902 SUPERFAMILY SSF55785 347 465 2.44E-13 T 09-03-2017 IPR000014 PAS domain BV404_RS12485 1c6efc247d68698d8cd7b88851c7b501 156 Pfam PF01316 Arginine repressor, DNA binding domain 7 74 5.8E-23 T 09-03-2017 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 BV404_RS12485 1c6efc247d68698d8cd7b88851c7b501 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 1.3E-23 T 09-03-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 BV404_RS12485 1c6efc247d68698d8cd7b88851c7b501 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 1.3E-23 T 09-03-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 BV404_RS12485 1c6efc247d68698d8cd7b88851c7b501 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 1.3E-23 T 09-03-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 BV404_RS12485 1c6efc247d68698d8cd7b88851c7b501 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 1.3E-23 T 09-03-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 BV404_RS12485 1c6efc247d68698d8cd7b88851c7b501 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 58.867 T 09-03-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 BV404_RS12485 1c6efc247d68698d8cd7b88851c7b501 156 Gene3D G3DSA:1.10.10.10 2 77 2.9E-34 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS12485 1c6efc247d68698d8cd7b88851c7b501 156 SUPERFAMILY SSF46785 3 77 2.9E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS12485 1c6efc247d68698d8cd7b88851c7b501 156 SUPERFAMILY SSF55252 82 151 3.4E-19 T 09-03-2017 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 BV404_RS12485 1c6efc247d68698d8cd7b88851c7b501 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 10 151 5.0E-43 T 09-03-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 BV404_RS12485 1c6efc247d68698d8cd7b88851c7b501 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 147 1.8E-21 T 09-03-2017 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 BV404_RS12485 1c6efc247d68698d8cd7b88851c7b501 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 145 5.0E-21 T 09-03-2017 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 BV404_RS12485 1c6efc247d68698d8cd7b88851c7b501 156 Gene3D G3DSA:3.30.1360.40 80 154 1.0E-25 T 09-03-2017 IPR024946 Arginine repressor C-terminal-like domain BV404_RS12415 79758d3224999876e5ac2ccf1b5065a9 431 SUPERFAMILY SSF109998 28 200 1.57E-37 T 09-03-2017 IPR027304 Trigger factor/SurA domain BV404_RS12415 79758d3224999876e5ac2ccf1b5065a9 431 Hamap MF_01183 Chaperone SurA [surA]. 7 426 32.007 T 09-03-2017 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 BV404_RS12415 79758d3224999876e5ac2ccf1b5065a9 431 SUPERFAMILY SSF54534 175 273 3.47E-25 T 09-03-2017 BV404_RS12415 79758d3224999876e5ac2ccf1b5065a9 431 SUPERFAMILY SSF54534 281 383 5.49E-30 T 09-03-2017 BV404_RS12415 79758d3224999876e5ac2ccf1b5065a9 431 Pfam PF13616 PPIC-type PPIASE domain 279 381 6.6E-23 T 09-03-2017 BV404_RS12415 79758d3224999876e5ac2ccf1b5065a9 431 Pfam PF13616 PPIC-type PPIASE domain 166 272 4.0E-21 T 09-03-2017 BV404_RS12415 79758d3224999876e5ac2ccf1b5065a9 431 Gene3D G3DSA:3.10.50.40 172 278 8.8E-28 T 09-03-2017 BV404_RS12415 79758d3224999876e5ac2ccf1b5065a9 431 Gene3D G3DSA:3.10.50.40 281 404 8.9E-34 T 09-03-2017 BV404_RS12415 79758d3224999876e5ac2ccf1b5065a9 431 Pfam PF09312 SurA N-terminal domain 27 144 1.9E-41 T 09-03-2017 IPR015391 SurA N-terminal BV404_RS01550 8ed9a0e38a0d8752259ad86c50bf6c94 421 Pfam PF11871 Domain of unknown function (DUF3391) 4 141 6.6E-31 T 09-03-2017 IPR021812 Protein of unknown function DUF3391 BV404_RS01550 8ed9a0e38a0d8752259ad86c50bf6c94 421 SMART SM00471 168 304 6.9E-7 T 09-03-2017 IPR003607 HD/PDEase domain BV404_RS01550 8ed9a0e38a0d8752259ad86c50bf6c94 421 SUPERFAMILY SSF109604 168 333 1.26E-25 T 09-03-2017 BV404_RS01550 8ed9a0e38a0d8752259ad86c50bf6c94 421 Pfam PF01966 HD domain 174 294 2.0E-14 T 09-03-2017 IPR006674 HD domain BV404_RS01550 8ed9a0e38a0d8752259ad86c50bf6c94 421 Gene3D G3DSA:1.10.3210.10 170 332 3.9E-20 T 09-03-2017 IPR006674 HD domain BV404_RS01550 8ed9a0e38a0d8752259ad86c50bf6c94 421 TIGRFAM TIGR00277 HDIG: HDIG domain 170 263 1.3E-7 T 09-03-2017 IPR006675 HDIG domain BV404_RS00480 20dc97be1c60040b86b5b766c0d17cba 228 SUPERFAMILY SSF52172 1 123 6.97E-39 T 09-03-2017 IPR011006 CheY-like superfamily BV404_RS00480 20dc97be1c60040b86b5b766c0d17cba 228 SMART SM00862 148 224 3.1E-20 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BV404_RS00480 20dc97be1c60040b86b5b766c0d17cba 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 224 2.0E-19 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BV404_RS00480 20dc97be1c60040b86b5b766c0d17cba 228 Gene3D G3DSA:1.10.10.10 125 226 2.2E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS00480 20dc97be1c60040b86b5b766c0d17cba 228 Gene3D G3DSA:3.40.50.2300 2 122 4.9E-39 T 09-03-2017 BV404_RS00480 20dc97be1c60040b86b5b766c0d17cba 228 Pfam PF00072 Response regulator receiver domain 4 112 2.5E-28 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS00480 20dc97be1c60040b86b5b766c0d17cba 228 SMART SM00448 2 111 1.5E-43 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS00480 20dc97be1c60040b86b5b766c0d17cba 228 SUPERFAMILY SSF46894 124 225 7.65E-24 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BV404_RS14615 dd86cf54e5a6eed5de5b4b7d08621fe7 185 Pfam PF04220 Der GTPase activator (YihI) 19 175 5.9E-43 T 09-03-2017 IPR007336 Der GTPase activator BV404_RS14615 dd86cf54e5a6eed5de5b4b7d08621fe7 185 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 178 15.626 T 09-03-2017 IPR007336 Der GTPase activator BV404_RS13295 328d3b455dab38635bcc8c0b46e400ef 447 Gene3D G3DSA:3.30.470.20 204 444 3.3E-101 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 BV404_RS13295 328d3b455dab38635bcc8c0b46e400ef 447 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 1.6E-85 T 09-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BV404_RS13295 328d3b455dab38635bcc8c0b46e400ef 447 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 09-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BV404_RS13295 328d3b455dab38635bcc8c0b46e400ef 447 SUPERFAMILY SSF52440 1 113 9.35E-46 T 09-03-2017 IPR016185 Pre-ATP-grasp domain BV404_RS13295 328d3b455dab38635bcc8c0b46e400ef 447 Gene3D G3DSA:3.30.1490.20 130 203 6.7E-30 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 BV404_RS13295 328d3b455dab38635bcc8c0b46e400ef 447 SUPERFAMILY SSF51246 331 444 1.2E-42 T 09-03-2017 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BV404_RS13295 328d3b455dab38635bcc8c0b46e400ef 447 SMART SM00878 336 441 9.8E-63 T 09-03-2017 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BV404_RS13295 328d3b455dab38635bcc8c0b46e400ef 447 SUPERFAMILY SSF56059 83 347 1.65E-71 T 09-03-2017 BV404_RS13295 328d3b455dab38635bcc8c0b46e400ef 447 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 1.3E-243 T 09-03-2017 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 BV404_RS13295 328d3b455dab38635bcc8c0b46e400ef 447 Gene3D G3DSA:3.40.50.20 1 129 5.8E-49 T 09-03-2017 IPR016185 Pre-ATP-grasp domain BV404_RS13295 328d3b455dab38635bcc8c0b46e400ef 447 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 1.6E-37 T 09-03-2017 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BV404_RS13295 328d3b455dab38635bcc8c0b46e400ef 447 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 09-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BV404_RS13295 328d3b455dab38635bcc8c0b46e400ef 447 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 4.6E-43 T 09-03-2017 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BV404_RS11005 b00e7af4e4c8c4f16b2b8a714eeec052 352 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 345 1.3E-159 T 09-03-2017 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 BV404_RS11005 b00e7af4e4c8c4f16b2b8a714eeec052 352 Pfam PF02547 Queuosine biosynthesis protein 3 345 1.2E-133 T 09-03-2017 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 BV404_RS11005 b00e7af4e4c8c4f16b2b8a714eeec052 352 Gene3D G3DSA:3.40.1780.10 1 62 8.4E-102 T 09-03-2017 BV404_RS11005 b00e7af4e4c8c4f16b2b8a714eeec052 352 Gene3D G3DSA:3.40.1780.10 179 345 8.4E-102 T 09-03-2017 BV404_RS11005 b00e7af4e4c8c4f16b2b8a714eeec052 352 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 346 47.231 T 09-03-2017 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 BV404_RS11005 b00e7af4e4c8c4f16b2b8a714eeec052 352 Gene3D G3DSA:2.40.10.240 64 142 6.0E-17 T 09-03-2017 BV404_RS11005 b00e7af4e4c8c4f16b2b8a714eeec052 352 SUPERFAMILY SSF111337 1 345 3.92E-140 T 09-03-2017 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 BV404_RS10095 422b8b0ae57390040f0110c8ab54a4c1 858 SUPERFAMILY SSF52374 4 226 2.01E-147 T 09-03-2017 BV404_RS10095 422b8b0ae57390040f0110c8ab54a4c1 858 SUPERFAMILY SSF52374 416 667 2.01E-147 T 09-03-2017 BV404_RS10095 422b8b0ae57390040f0110c8ab54a4c1 858 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 418 571 1.7E-8 T 09-03-2017 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 BV404_RS10095 422b8b0ae57390040f0110c8ab54a4c1 858 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 172 9.0E-27 T 09-03-2017 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 BV404_RS10095 422b8b0ae57390040f0110c8ab54a4c1 858 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 608 650 8.1E-8 T 09-03-2017 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 BV404_RS10095 422b8b0ae57390040f0110c8ab54a4c1 858 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 857 0.0 T 09-03-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BV404_RS10095 422b8b0ae57390040f0110c8ab54a4c1 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 6.8E-52 T 09-03-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BV404_RS10095 422b8b0ae57390040f0110c8ab54a4c1 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 6.8E-52 T 09-03-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BV404_RS10095 422b8b0ae57390040f0110c8ab54a4c1 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 6.8E-52 T 09-03-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BV404_RS10095 422b8b0ae57390040f0110c8ab54a4c1 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 6.8E-52 T 09-03-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BV404_RS10095 422b8b0ae57390040f0110c8ab54a4c1 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 556 566 6.8E-52 T 09-03-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BV404_RS10095 422b8b0ae57390040f0110c8ab54a4c1 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 6.8E-52 T 09-03-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BV404_RS10095 422b8b0ae57390040f0110c8ab54a4c1 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 523 545 6.8E-52 T 09-03-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BV404_RS10095 422b8b0ae57390040f0110c8ab54a4c1 858 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 09-03-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BV404_RS10095 422b8b0ae57390040f0110c8ab54a4c1 858 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 857 23.413 T 09-03-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BV404_RS10095 422b8b0ae57390040f0110c8ab54a4c1 858 SUPERFAMILY SSF47323 661 857 1.48E-34 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BV404_RS10095 422b8b0ae57390040f0110c8ab54a4c1 858 SUPERFAMILY SSF50677 226 415 2.2E-57 T 09-03-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 BV404_RS10095 422b8b0ae57390040f0110c8ab54a4c1 858 Pfam PF08264 Anticodon-binding domain of tRNA 700 821 2.7E-15 T 09-03-2017 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 BV404_RS10095 422b8b0ae57390040f0110c8ab54a4c1 858 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 404 3.9E-80 T 09-03-2017 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 BV404_RS10095 422b8b0ae57390040f0110c8ab54a4c1 858 Gene3D G3DSA:1.10.730.10 647 793 3.8E-46 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BV404_RS10095 422b8b0ae57390040f0110c8ab54a4c1 858 Gene3D G3DSA:3.40.50.620 425 572 1.3E-156 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS10095 422b8b0ae57390040f0110c8ab54a4c1 858 Gene3D G3DSA:3.40.50.620 4 222 1.3E-156 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS10095 422b8b0ae57390040f0110c8ab54a4c1 858 Gene3D G3DSA:3.40.50.620 617 646 1.3E-156 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS10095 422b8b0ae57390040f0110c8ab54a4c1 858 Gene3D G3DSA:3.90.740.10 223 424 3.2E-59 T 09-03-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 BV404_RS02975 1f0de9294cd3e8e5f4a0104f7402db00 432 SUPERFAMILY SSF82829 231 315 5.62E-25 T 09-03-2017 BV404_RS02975 1f0de9294cd3e8e5f4a0104f7402db00 432 Pfam PF11734 TilS substrate C-terminal domain 363 428 5.0E-21 T 09-03-2017 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BV404_RS02975 1f0de9294cd3e8e5f4a0104f7402db00 432 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 19 200 1.3E-54 T 09-03-2017 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BV404_RS02975 1f0de9294cd3e8e5f4a0104f7402db00 432 SMART SM00977 361 430 1.4E-21 T 09-03-2017 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BV404_RS02975 1f0de9294cd3e8e5f4a0104f7402db00 432 Pfam PF01171 PP-loop family 19 196 9.4E-61 T 09-03-2017 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 BV404_RS02975 1f0de9294cd3e8e5f4a0104f7402db00 432 SUPERFAMILY SSF56037 320 430 4.97E-27 T 09-03-2017 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Reactome: R-HSA-379716 BV404_RS02975 1f0de9294cd3e8e5f4a0104f7402db00 432 SUPERFAMILY SSF52402 16 229 1.57E-59 T 09-03-2017 BV404_RS02975 1f0de9294cd3e8e5f4a0104f7402db00 432 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 362 406 3.1E-15 T 09-03-2017 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BV404_RS02975 1f0de9294cd3e8e5f4a0104f7402db00 432 Pfam PF09179 TilS substrate binding domain 245 312 6.5E-21 T 09-03-2017 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BV404_RS02975 1f0de9294cd3e8e5f4a0104f7402db00 432 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 7 304 24.07 T 09-03-2017 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BV404_RS02975 1f0de9294cd3e8e5f4a0104f7402db00 432 Gene3D G3DSA:3.40.50.620 8 177 8.1E-15 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS17245 d8de6559ff781fda3029485913cf934c 147 Pfam PF02690 Na+/Pi-cotransporter 1 83 5.7E-16 T 09-03-2017 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 BV404_RS04980 1a2a1b4b45880162a9121f5bdad036c7 186 Pfam PF04542 Sigma-70 region 2 16 80 1.2E-10 T 09-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS04980 1a2a1b4b45880162a9121f5bdad036c7 186 SUPERFAMILY SSF88659 105 164 2.62E-12 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS04980 1a2a1b4b45880162a9121f5bdad036c7 186 Gene3D G3DSA:1.10.10.10 107 165 6.5E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS04980 1a2a1b4b45880162a9121f5bdad036c7 186 SUPERFAMILY SSF88946 16 98 2.39E-15 T 09-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS04980 1a2a1b4b45880162a9121f5bdad036c7 186 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 163 1.3E-19 T 09-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS04980 1a2a1b4b45880162a9121f5bdad036c7 186 Gene3D G3DSA:1.10.1740.10 16 101 1.1E-15 T 09-03-2017 BV404_RS04980 1a2a1b4b45880162a9121f5bdad036c7 186 Pfam PF08281 Sigma-70, region 4 107 159 6.8E-14 T 09-03-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS07065 d34d5a07e4a36e366ca576a21d3c5b09 354 Gene3D G3DSA:1.20.950.20 120 334 1.9E-62 T 09-03-2017 BV404_RS07065 d34d5a07e4a36e366ca576a21d3c5b09 354 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 123 327 3.5E-82 T 09-03-2017 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 BV404_RS07065 d34d5a07e4a36e366ca576a21d3c5b09 354 SUPERFAMILY SSF81342 120 333 6.43E-45 T 09-03-2017 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 BV404_RS07065 d34d5a07e4a36e366ca576a21d3c5b09 354 Pfam PF01292 Prokaryotic cytochrome b561 126 307 1.1E-25 T 09-03-2017 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 BV404_RS07060 9e0b83be3fa9de73fb130d0d486436c1 202 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BV404_RS07060 9e0b83be3fa9de73fb130d0d486436c1 202 Pfam PF13247 4Fe-4S dicluster domain 54 125 1.4E-10 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BV404_RS07060 9e0b83be3fa9de73fb130d0d486436c1 202 SUPERFAMILY SSF54862 1 183 1.05E-47 T 09-03-2017 BV404_RS07060 9e0b83be3fa9de73fb130d0d486436c1 202 Gene3D G3DSA:3.30.70.20 65 120 4.7E-22 T 09-03-2017 BV404_RS07060 9e0b83be3fa9de73fb130d0d486436c1 202 Gene3D G3DSA:3.30.70.20 121 181 5.7E-21 T 09-03-2017 BV404_RS07060 9e0b83be3fa9de73fb130d0d486436c1 202 Gene3D G3DSA:3.30.70.20 3 64 5.7E-21 T 09-03-2017 BV404_RS01195 d73ef8787b9cdc488ddf83ff58d69f54 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 151 174 1.0E-76 T 09-03-2017 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BV404_RS01195 d73ef8787b9cdc488ddf83ff58d69f54 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 208 235 1.0E-76 T 09-03-2017 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BV404_RS01195 d73ef8787b9cdc488ddf83ff58d69f54 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 182 205 1.0E-76 T 09-03-2017 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BV404_RS01195 d73ef8787b9cdc488ddf83ff58d69f54 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 307 332 1.0E-76 T 09-03-2017 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BV404_RS01195 d73ef8787b9cdc488ddf83ff58d69f54 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 30 57 1.0E-76 T 09-03-2017 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BV404_RS01195 d73ef8787b9cdc488ddf83ff58d69f54 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 67 93 1.0E-76 T 09-03-2017 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BV404_RS01195 d73ef8787b9cdc488ddf83ff58d69f54 336 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 5 333 43.318 T 09-03-2017 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BV404_RS01195 d73ef8787b9cdc488ddf83ff58d69f54 336 SUPERFAMILY SSF56655 3 331 1.83E-114 T 09-03-2017 BV404_RS01195 d73ef8787b9cdc488ddf83ff58d69f54 336 Gene3D G3DSA:3.30.540.10 5 198 8.0E-81 T 09-03-2017 BV404_RS01195 d73ef8787b9cdc488ddf83ff58d69f54 336 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 6 197 3.1E-77 T 09-03-2017 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BV404_RS01195 d73ef8787b9cdc488ddf83ff58d69f54 336 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 273 285 - T 09-03-2017 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BV404_RS01195 d73ef8787b9cdc488ddf83ff58d69f54 336 PIRSF PIRSF000904 1 335 2.0E-126 T 09-03-2017 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BV404_RS01195 d73ef8787b9cdc488ddf83ff58d69f54 336 PIRSF PIRSF500210 1 335 6.9E-129 T 09-03-2017 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BV404_RS01195 d73ef8787b9cdc488ddf83ff58d69f54 336 Gene3D G3DSA:3.40.190.80 200 332 3.9E-60 T 09-03-2017 BV404_RS05565 874f877d25c5bb4ac5f9dd0f66ee9884 267 Gene3D G3DSA:3.40.50.150 36 266 1.1E-47 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS05565 874f877d25c5bb4ac5f9dd0f66ee9884 267 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 21 266 1.5E-67 T 09-03-2017 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519 BV404_RS05565 874f877d25c5bb4ac5f9dd0f66ee9884 267 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 13 267 32.449 T 09-03-2017 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519 BV404_RS05565 874f877d25c5bb4ac5f9dd0f66ee9884 267 SUPERFAMILY SSF53335 19 218 2.13E-47 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS05565 874f877d25c5bb4ac5f9dd0f66ee9884 267 Pfam PF08241 Methyltransferase domain 57 147 4.7E-28 T 09-03-2017 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 BV404_RS11555 be98da4c4b656dfb933a896320185c01 121 PIRSF PIRSF026426 1 119 4.2E-43 T 09-03-2017 IPR010865 Protein of unknown function DUF1499 BV404_RS11555 be98da4c4b656dfb933a896320185c01 121 Pfam PF07386 Protein of unknown function (DUF1499) 8 112 1.2E-22 T 09-03-2017 IPR010865 Protein of unknown function DUF1499 BV404_RS02430 238b71410548f8afb0ae51f8e9006f7d 98 SMART SM00418 15 93 2.8E-30 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BV404_RS02430 238b71410548f8afb0ae51f8e9006f7d 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 47 8.3E-16 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BV404_RS02430 238b71410548f8afb0ae51f8e9006f7d 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 8.3E-16 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BV404_RS02430 238b71410548f8afb0ae51f8e9006f7d 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 8.3E-16 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BV404_RS02430 238b71410548f8afb0ae51f8e9006f7d 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 8.3E-16 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BV404_RS02430 238b71410548f8afb0ae51f8e9006f7d 98 SUPERFAMILY SSF46785 9 96 6.27E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS02430 238b71410548f8afb0ae51f8e9006f7d 98 Gene3D G3DSA:1.10.10.10 3 97 5.6E-38 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS02430 238b71410548f8afb0ae51f8e9006f7d 98 Pfam PF01022 Bacterial regulatory protein, arsR family 23 68 3.7E-17 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BV404_RS11200 c9180a1f56395cdab3f9c5b7cd190129 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 2.2E-16 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS11200 c9180a1f56395cdab3f9c5b7cd190129 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.4E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS11200 c9180a1f56395cdab3f9c5b7cd190129 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.4E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS11200 c9180a1f56395cdab3f9c5b7cd190129 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.4E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS11200 c9180a1f56395cdab3f9c5b7cd190129 303 SUPERFAMILY SSF53850 92 296 3.88E-41 T 09-03-2017 BV404_RS11200 c9180a1f56395cdab3f9c5b7cd190129 303 Pfam PF03466 LysR substrate binding domain 90 295 4.1E-48 T 09-03-2017 IPR005119 LysR, substrate-binding BV404_RS11200 c9180a1f56395cdab3f9c5b7cd190129 303 SUPERFAMILY SSF46785 5 113 2.54E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS11200 c9180a1f56395cdab3f9c5b7cd190129 303 Gene3D G3DSA:3.40.190.10 93 178 1.3E-14 T 09-03-2017 BV404_RS11200 c9180a1f56395cdab3f9c5b7cd190129 303 Gene3D G3DSA:1.10.10.10 5 87 1.6E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS11200 c9180a1f56395cdab3f9c5b7cd190129 303 Gene3D G3DSA:3.40.190.10 179 261 9.8E-19 T 09-03-2017 BV404_RS10690 ef317fa4a9ef6ac54ce0d0b06099a026 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 63 3.1E-19 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS10690 ef317fa4a9ef6ac54ce0d0b06099a026 295 Gene3D G3DSA:3.40.190.10 177 255 3.2E-22 T 09-03-2017 BV404_RS10690 ef317fa4a9ef6ac54ce0d0b06099a026 295 Gene3D G3DSA:1.10.10.10 7 88 1.4E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS10690 ef317fa4a9ef6ac54ce0d0b06099a026 295 Gene3D G3DSA:3.40.190.10 92 176 4.6E-23 T 09-03-2017 BV404_RS10690 ef317fa4a9ef6ac54ce0d0b06099a026 295 SUPERFAMILY SSF53850 89 290 2.9E-49 T 09-03-2017 BV404_RS10690 ef317fa4a9ef6ac54ce0d0b06099a026 295 Pfam PF03466 LysR substrate binding domain 88 288 3.3E-50 T 09-03-2017 IPR005119 LysR, substrate-binding BV404_RS10690 ef317fa4a9ef6ac54ce0d0b06099a026 295 SUPERFAMILY SSF46785 5 88 1.09E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS10295 8d25207db7ef2c1ff149d2f260ed1c37 465 SUPERFAMILY SSF103473 19 450 2.22E-59 T 09-03-2017 IPR020846 Major facilitator superfamily domain BV404_RS10295 8d25207db7ef2c1ff149d2f260ed1c37 465 ProSitePatterns PS00942 glpT family of transporters signature. 156 172 - T 09-03-2017 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-3229133|Reactome: R-HSA-70153 BV404_RS10295 8d25207db7ef2c1ff149d2f260ed1c37 465 Gene3D G3DSA:1.20.1250.20 252 456 4.0E-30 T 09-03-2017 BV404_RS10295 8d25207db7ef2c1ff149d2f260ed1c37 465 Gene3D G3DSA:1.20.1250.20 29 233 8.4E-34 T 09-03-2017 BV404_RS10295 8d25207db7ef2c1ff149d2f260ed1c37 465 Pfam PF07690 Major Facilitator Superfamily 35 396 2.5E-34 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BV404_RS10295 8d25207db7ef2c1ff149d2f260ed1c37 465 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 426 8.1E-140 T 09-03-2017 BV404_RS10295 8d25207db7ef2c1ff149d2f260ed1c37 465 PIRSF PIRSF002808 10 460 8.4E-109 T 09-03-2017 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 BV404_RS00585 81c1d3167af87e0c376985ff422c97a3 453 Pfam PF01554 MatE 22 176 3.4E-26 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BV404_RS00585 81c1d3167af87e0c376985ff422c97a3 453 Pfam PF01554 MatE 245 406 7.9E-20 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BV404_RS00585 81c1d3167af87e0c376985ff422c97a3 453 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 414 1.1E-56 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BV404_RS00585 81c1d3167af87e0c376985ff422c97a3 453 PIRSF PIRSF006603 1 445 8.2E-128 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BV404_RS13025 5dcfc7cbe70b2751af6ba6dba7e9041b 471 Pfam PF00939 Sodium:sulfate symporter transmembrane region 20 468 1.3E-48 T 09-03-2017 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 BV404_RS13025 5dcfc7cbe70b2751af6ba6dba7e9041b 471 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 38 465 3.6E-81 T 09-03-2017 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 BV404_RS04180 9a89e92fa82e6411f649040127a691ad 371 SUPERFAMILY SSF51735 1 146 2.12E-50 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS04180 9a89e92fa82e6411f649040127a691ad 371 Gene3D G3DSA:3.30.360.10 142 350 5.3E-75 T 09-03-2017 BV404_RS04180 9a89e92fa82e6411f649040127a691ad 371 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 261 275 - T 09-03-2017 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 BV404_RS04180 9a89e92fa82e6411f649040127a691ad 371 SMART SM00859 2 121 4.5E-22 T 09-03-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 BV404_RS04180 9a89e92fa82e6411f649040127a691ad 371 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 120 2.9E-22 T 09-03-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 BV404_RS04180 9a89e92fa82e6411f649040127a691ad 371 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 1 366 6.1E-189 T 09-03-2017 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 BV404_RS04180 9a89e92fa82e6411f649040127a691ad 371 Gene3D G3DSA:3.40.50.720 1 141 2.2E-60 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS04180 9a89e92fa82e6411f649040127a691ad 371 PIRSF PIRSF000148 1 371 1.2E-65 T 09-03-2017 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 BV404_RS04180 9a89e92fa82e6411f649040127a691ad 371 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 367 31.762 T 09-03-2017 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 BV404_RS04180 9a89e92fa82e6411f649040127a691ad 371 SUPERFAMILY SSF55347 133 354 2.34E-77 T 09-03-2017 BV404_RS04180 9a89e92fa82e6411f649040127a691ad 371 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 143 353 4.0E-57 T 09-03-2017 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BV404_RS11080 b5e76c049127c5718b50ecc96c5030d8 432 SUPERFAMILY SSF55785 86 197 2.97E-11 T 09-03-2017 IPR000014 PAS domain BV404_RS11080 b5e76c049127c5718b50ecc96c5030d8 432 SMART SM00387 317 429 8.4E-33 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS11080 b5e76c049127c5718b50ecc96c5030d8 432 SUPERFAMILY SSF47384 192 272 1.28E-18 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS11080 b5e76c049127c5718b50ecc96c5030d8 432 Gene3D G3DSA:3.30.565.10 259 427 1.3E-41 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS11080 b5e76c049127c5718b50ecc96c5030d8 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 6.0E-13 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS11080 b5e76c049127c5718b50ecc96c5030d8 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 6.0E-13 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS11080 b5e76c049127c5718b50ecc96c5030d8 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 407 6.0E-13 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS11080 b5e76c049127c5718b50ecc96c5030d8 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 426 6.0E-13 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS11080 b5e76c049127c5718b50ecc96c5030d8 432 Pfam PF11808 Domain of unknown function (DUF3329) 7 91 2.1E-31 T 09-03-2017 IPR021766 Protein of unknown function DUF3329 GO:0004673 BV404_RS11080 b5e76c049127c5718b50ecc96c5030d8 432 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 94 424 5.2E-138 T 09-03-2017 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 BV404_RS11080 b5e76c049127c5718b50ecc96c5030d8 432 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 99 204 1.6E-6 T 09-03-2017 IPR000014 PAS domain BV404_RS11080 b5e76c049127c5718b50ecc96c5030d8 432 Gene3D G3DSA:3.30.450.20 98 196 4.8E-11 T 09-03-2017 BV404_RS11080 b5e76c049127c5718b50ecc96c5030d8 432 SUPERFAMILY SSF55874 261 427 1.44E-40 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS11080 b5e76c049127c5718b50ecc96c5030d8 432 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 271 6.0E-16 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS11080 b5e76c049127c5718b50ecc96c5030d8 432 SMART SM00388 205 272 2.5E-20 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS11080 b5e76c049127c5718b50ecc96c5030d8 432 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 318 427 2.8E-21 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS11080 b5e76c049127c5718b50ecc96c5030d8 432 Gene3D G3DSA:1.10.287.130 197 258 1.9E-19 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS11080 b5e76c049127c5718b50ecc96c5030d8 432 SMART SM00091 98 164 3.5E-6 T 09-03-2017 IPR000014 PAS domain BV404_RS11080 b5e76c049127c5718b50ecc96c5030d8 432 Pfam PF00989 PAS fold 99 179 1.7E-8 T 09-03-2017 IPR013767 PAS fold GO:0006355 BV404_RS07220 a6f22b70c6f2ae39604cc5e049bd1a96 73 PIRSF PIRSF004117 1 73 5.6E-7 T 09-03-2017 IPR008020 Capsid protein G8P GO:0019028 BV404_RS07220 a6f22b70c6f2ae39604cc5e049bd1a96 73 Pfam PF05371 Phage major coat protein, Gp8 29 72 7.0E-5 T 09-03-2017 IPR008020 Capsid protein G8P GO:0019028 BV404_RS07220 a6f22b70c6f2ae39604cc5e049bd1a96 73 SUPERFAMILY SSF57987 25 73 7.02E-9 T 09-03-2017 BV404_RS07220 a6f22b70c6f2ae39604cc5e049bd1a96 73 Gene3D G3DSA:1.20.5.80 26 73 1.9E-15 T 09-03-2017 IPR023390 Bacteriophage M13, G8P, capsid domain BV404_RS02045 9ed8a4415e2cf5f12599320001bb5322 782 Gene3D G3DSA:1.10.3810.10 178 354 2.2E-68 T 09-03-2017 BV404_RS02045 9ed8a4415e2cf5f12599320001bb5322 782 SUPERFAMILY SSF53955 178 374 1.41E-69 T 09-03-2017 IPR023346 Lysozyme-like domain BV404_RS02045 9ed8a4415e2cf5f12599320001bb5322 782 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 40 762 0.0 T 09-03-2017 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BV404_RS02045 9ed8a4415e2cf5f12599320001bb5322 782 Gene3D G3DSA:3.40.710.10 355 747 5.2E-106 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like BV404_RS02045 9ed8a4415e2cf5f12599320001bb5322 782 Pfam PF14814 Bifunctional transglycosylase second domain 85 168 9.7E-26 T 09-03-2017 IPR028166 Bifunctional transglycosylase second domain KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BV404_RS02045 9ed8a4415e2cf5f12599320001bb5322 782 PIRSF PIRSF002799 5 782 0.0 T 09-03-2017 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BV404_RS02045 9ed8a4415e2cf5f12599320001bb5322 782 Pfam PF00912 Transglycosylase 181 352 8.3E-60 T 09-03-2017 IPR001264 Glycosyl transferase, family 51 BV404_RS02045 9ed8a4415e2cf5f12599320001bb5322 782 SUPERFAMILY SSF56601 384 769 3.94E-108 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like BV404_RS02045 9ed8a4415e2cf5f12599320001bb5322 782 SUPERFAMILY SSF56601 334 356 3.94E-108 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like BV404_RS02045 9ed8a4415e2cf5f12599320001bb5322 782 Pfam PF00905 Penicillin binding protein transpeptidase domain 444 683 1.6E-22 T 09-03-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 BV404_RS02045 9ed8a4415e2cf5f12599320001bb5322 782 Gene3D G3DSA:1.20.5.100 29 67 2.2E-4 T 09-03-2017 BV404_RS02045 9ed8a4415e2cf5f12599320001bb5322 782 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 185 719 1.4E-155 T 09-03-2017 BV404_RS02045 9ed8a4415e2cf5f12599320001bb5322 782 Gene3D G3DSA:3.30.2060.10 83 172 4.5E-28 T 09-03-2017 BV404_RS01660 7e2632546ad12ff0bff082919ee60311 196 PIRSF PIRSF006806 1 191 7.4E-40 T 09-03-2017 IPR002698 5-formyltetrahydrofolate cyclo-ligase BV404_RS01660 7e2632546ad12ff0bff082919ee60311 196 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 5 188 2.5E-47 T 09-03-2017 IPR002698 5-formyltetrahydrofolate cyclo-ligase BV404_RS01660 7e2632546ad12ff0bff082919ee60311 196 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 5 188 3.8E-56 T 09-03-2017 IPR002698 5-formyltetrahydrofolate cyclo-ligase BV404_RS01660 7e2632546ad12ff0bff082919ee60311 196 SUPERFAMILY SSF100950 4 194 1.26E-59 T 09-03-2017 BV404_RS01660 7e2632546ad12ff0bff082919ee60311 196 Gene3D G3DSA:3.40.50.10420 5 195 1.8E-59 T 09-03-2017 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain BV404_RS06360 be5fdf4bb1ae71629a62814751bb3295 168 Gene3D G3DSA:3.40.50.300 2 162 2.2E-63 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS06360 be5fdf4bb1ae71629a62814751bb3295 168 SUPERFAMILY SSF52540 3 162 5.82E-26 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS06360 be5fdf4bb1ae71629a62814751bb3295 168 Pfam PF01202 Shikimate kinase 12 158 5.3E-19 T 09-03-2017 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 BV404_RS06360 be5fdf4bb1ae71629a62814751bb3295 168 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 6 161 1.7E-54 T 09-03-2017 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 BV404_RS06360 be5fdf4bb1ae71629a62814751bb3295 168 PRINTS PR01100 Shikimate kinase family signature 6 21 2.3E-5 T 09-03-2017 BV404_RS06360 be5fdf4bb1ae71629a62814751bb3295 168 PRINTS PR01100 Shikimate kinase family signature 96 113 2.3E-5 T 09-03-2017 BV404_RS11130 99ae2f9eeae7f780fa14faa978eea7ec 296 Gene3D G3DSA:3.40.50.720 1 173 3.4E-42 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS11130 99ae2f9eeae7f780fa14faa978eea7ec 296 Gene3D G3DSA:1.10.1040.10 174 291 2.0E-44 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BV404_RS11130 99ae2f9eeae7f780fa14faa978eea7ec 296 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 292 1.1E-85 T 09-03-2017 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 BV404_RS11130 99ae2f9eeae7f780fa14faa978eea7ec 296 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 168 289 8.3E-37 T 09-03-2017 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 BV404_RS11130 99ae2f9eeae7f780fa14faa978eea7ec 296 SUPERFAMILY SSF48179 168 290 3.74E-36 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 BV404_RS11130 99ae2f9eeae7f780fa14faa978eea7ec 296 SUPERFAMILY SSF51735 1 165 4.38E-49 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS11130 99ae2f9eeae7f780fa14faa978eea7ec 296 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 142 5.3E-29 T 09-03-2017 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 BV404_RS09930 fd7e1492321dc7598d7bf65e1302ca0a 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 6.9E-15 T 09-03-2017 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219 BV404_RS09930 fd7e1492321dc7598d7bf65e1302ca0a 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 09-03-2017 BV404_RS09930 fd7e1492321dc7598d7bf65e1302ca0a 214 Gene3D G3DSA:3.40.50.300 1 213 1.9E-81 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09930 fd7e1492321dc7598d7bf65e1302ca0a 214 PRINTS PR00094 Adenylate kinase signature 4 17 8.9E-36 T 09-03-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BV404_RS09930 fd7e1492321dc7598d7bf65e1302ca0a 214 PRINTS PR00094 Adenylate kinase signature 32 46 8.9E-36 T 09-03-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BV404_RS09930 fd7e1492321dc7598d7bf65e1302ca0a 214 PRINTS PR00094 Adenylate kinase signature 173 187 8.9E-36 T 09-03-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BV404_RS09930 fd7e1492321dc7598d7bf65e1302ca0a 214 PRINTS PR00094 Adenylate kinase signature 81 97 8.9E-36 T 09-03-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BV404_RS09930 fd7e1492321dc7598d7bf65e1302ca0a 214 PRINTS PR00094 Adenylate kinase signature 156 171 8.9E-36 T 09-03-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BV404_RS09930 fd7e1492321dc7598d7bf65e1302ca0a 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 1.1E-75 T 09-03-2017 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219 BV404_RS09930 fd7e1492321dc7598d7bf65e1302ca0a 214 SUPERFAMILY SSF52540 1 187 4.9E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09930 fd7e1492321dc7598d7bf65e1302ca0a 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 52.608 T 09-03-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BV404_RS09930 fd7e1492321dc7598d7bf65e1302ca0a 214 Pfam PF00406 Adenylate kinase 5 185 5.6E-60 T 09-03-2017 BV404_RS09080 f126aed7d66b687b28ba0735c3b00d49 279 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 279 138.297 T 09-03-2017 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 BV404_RS09080 f126aed7d66b687b28ba0735c3b00d49 279 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 71 3.0E-20 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BV404_RS09080 f126aed7d66b687b28ba0735c3b00d49 279 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 276 5.1E-117 T 09-03-2017 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 BV404_RS09080 f126aed7d66b687b28ba0735c3b00d49 279 SMART SM00345 12 71 1.6E-22 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BV404_RS09080 f126aed7d66b687b28ba0735c3b00d49 279 Gene3D G3DSA:1.10.10.10 12 74 5.2E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS09080 f126aed7d66b687b28ba0735c3b00d49 279 Gene3D G3DSA:1.20.120.530 178 278 2.0E-67 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal BV404_RS09080 f126aed7d66b687b28ba0735c3b00d49 279 Gene3D G3DSA:1.20.120.530 80 137 2.0E-67 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal BV404_RS09080 f126aed7d66b687b28ba0735c3b00d49 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 3.5E-9 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BV404_RS09080 f126aed7d66b687b28ba0735c3b00d49 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 3.5E-9 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BV404_RS09080 f126aed7d66b687b28ba0735c3b00d49 279 SUPERFAMILY SSF48008 178 270 8.89E-57 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal BV404_RS09080 f126aed7d66b687b28ba0735c3b00d49 279 SUPERFAMILY SSF48008 79 137 8.89E-57 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal BV404_RS09080 f126aed7d66b687b28ba0735c3b00d49 279 Pfam PF07840 FadR C-terminal domain 72 274 5.2E-68 T 09-03-2017 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 BV404_RS09080 f126aed7d66b687b28ba0735c3b00d49 279 SUPERFAMILY SSF46785 12 74 8.2E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS13285 c44bc7f0a5b9d4b937b6aa0ba58d098b 149 PIRSF PIRSF001399 3 149 9.9E-61 T 09-03-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BV404_RS13285 c44bc7f0a5b9d4b937b6aa0ba58d098b 149 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 149 75.083 T 09-03-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BV404_RS13285 c44bc7f0a5b9d4b937b6aa0ba58d098b 149 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 21 149 7.0E-61 T 09-03-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BV404_RS13285 c44bc7f0a5b9d4b937b6aa0ba58d098b 149 Pfam PF01220 Dehydroquinase class II 6 142 1.8E-60 T 09-03-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BV404_RS13285 c44bc7f0a5b9d4b937b6aa0ba58d098b 149 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 145 4.0E-66 T 09-03-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BV404_RS13285 c44bc7f0a5b9d4b937b6aa0ba58d098b 149 Gene3D G3DSA:3.40.50.9100 4 147 2.8E-69 T 09-03-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BV404_RS13285 c44bc7f0a5b9d4b937b6aa0ba58d098b 149 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 09-03-2017 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BV404_RS13285 c44bc7f0a5b9d4b937b6aa0ba58d098b 149 SUPERFAMILY SSF52304 6 147 3.4E-62 T 09-03-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BV404_RS11185 d6e429dc446cd50fd59ffdd1f2769be3 1202 Gene3D G3DSA:1.10.486.10 585 733 5.0E-52 T 09-03-2017 BV404_RS11185 d6e429dc446cd50fd59ffdd1f2769be3 1202 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 13 1183 0.0 T 09-03-2017 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 BV404_RS11185 d6e429dc446cd50fd59ffdd1f2769be3 1202 Pfam PF00580 UvrD/REP helicase N-terminal domain 19 439 1.7E-57 T 09-03-2017 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 BV404_RS11185 d6e429dc446cd50fd59ffdd1f2769be3 1202 Gene3D G3DSA:1.10.3170.10 160 351 3.0E-58 T 09-03-2017 BV404_RS11185 d6e429dc446cd50fd59ffdd1f2769be3 1202 Pfam PF12705 PD-(D/E)XK nuclease superfamily 959 1181 1.3E-7 T 09-03-2017 BV404_RS11185 d6e429dc446cd50fd59ffdd1f2769be3 1202 Pfam PF13361 UvrD-like helicase C-terminal domain 446 814 1.4E-16 T 09-03-2017 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 BV404_RS11185 d6e429dc446cd50fd59ffdd1f2769be3 1202 Gene3D G3DSA:3.90.320.10 895 1187 4.5E-103 T 09-03-2017 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 BV404_RS11185 d6e429dc446cd50fd59ffdd1f2769be3 1202 Gene3D G3DSA:3.40.50.300 125 154 9.6E-50 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11185 d6e429dc446cd50fd59ffdd1f2769be3 1202 Gene3D G3DSA:3.40.50.300 6 87 9.6E-50 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11185 d6e429dc446cd50fd59ffdd1f2769be3 1202 Gene3D G3DSA:3.40.50.300 353 452 9.6E-50 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11185 d6e429dc446cd50fd59ffdd1f2769be3 1202 Gene3D G3DSA:3.40.50.300 734 863 1.7E-58 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11185 d6e429dc446cd50fd59ffdd1f2769be3 1202 Gene3D G3DSA:3.40.50.300 453 582 1.7E-58 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11185 d6e429dc446cd50fd59ffdd1f2769be3 1202 SUPERFAMILY SSF52980 906 1184 4.18E-86 T 09-03-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 BV404_RS11185 d6e429dc446cd50fd59ffdd1f2769be3 1202 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 10 1184 22.95 T 09-03-2017 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 BV404_RS11185 d6e429dc446cd50fd59ffdd1f2769be3 1202 SUPERFAMILY SSF52540 123 207 7.55E-107 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11185 d6e429dc446cd50fd59ffdd1f2769be3 1202 SUPERFAMILY SSF52540 18 85 7.55E-107 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11185 d6e429dc446cd50fd59ffdd1f2769be3 1202 SUPERFAMILY SSF52540 328 846 7.55E-107 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS00160 bc34bbcdf5d101a123db56a5df1e8310 182 Pfam PF13521 AAA domain 4 164 2.5E-36 T 09-03-2017 BV404_RS00160 bc34bbcdf5d101a123db56a5df1e8310 182 Gene3D G3DSA:3.40.50.300 1 169 3.5E-23 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS00160 bc34bbcdf5d101a123db56a5df1e8310 182 SUPERFAMILY SSF52540 4 168 1.25E-14 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09140 115b42464a8b49f9f46ef46b07f8e3c6 231 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 57 70 - T 09-03-2017 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 BV404_RS09140 115b42464a8b49f9f46ef46b07f8e3c6 231 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 3 231 40.103 T 09-03-2017 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 BV404_RS09140 115b42464a8b49f9f46ef46b07f8e3c6 231 Gene3D G3DSA:3.20.20.70 2 229 1.3E-90 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS09140 115b42464a8b49f9f46ef46b07f8e3c6 231 SUPERFAMILY SSF51366 3 229 5.65E-77 T 09-03-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 BV404_RS09140 115b42464a8b49f9f46ef46b07f8e3c6 231 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 225 7.8E-53 T 09-03-2017 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 BV404_RS09140 115b42464a8b49f9f46ef46b07f8e3c6 231 SMART SM00934 5 226 2.5E-101 T 09-03-2017 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 BV404_RS09140 115b42464a8b49f9f46ef46b07f8e3c6 231 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 6 226 4.7E-58 T 09-03-2017 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 BV404_RS00680 e97596346a9e7686c2e5d62b673d5a2a 144 SUPERFAMILY SSF52821 15 143 1.83E-29 T 09-03-2017 IPR001763 Rhodanese-like domain BV404_RS00680 e97596346a9e7686c2e5d62b673d5a2a 144 Pfam PF00581 Rhodanese-like domain 41 135 3.8E-18 T 09-03-2017 IPR001763 Rhodanese-like domain BV404_RS00680 e97596346a9e7686c2e5d62b673d5a2a 144 Gene3D G3DSA:3.40.250.10 22 143 1.6E-28 T 09-03-2017 IPR001763 Rhodanese-like domain BV404_RS00680 e97596346a9e7686c2e5d62b673d5a2a 144 SMART SM00450 40 138 5.5E-19 T 09-03-2017 IPR001763 Rhodanese-like domain BV404_RS08760 e27f10e8addb14bfbe5c6578ec3b962f 353 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 29 341 3.4E-115 T 09-03-2017 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 BV404_RS08760 e27f10e8addb14bfbe5c6578ec3b962f 353 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 66.75 T 09-03-2017 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 BV404_RS08760 e27f10e8addb14bfbe5c6578ec3b962f 353 SUPERFAMILY SSF142754 30 341 3.4E-106 T 09-03-2017 BV404_RS08760 e27f10e8addb14bfbe5c6578ec3b962f 353 Pfam PF02445 Quinolinate synthetase A protein 32 340 3.5E-101 T 09-03-2017 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 BV404_RS03645 f0b35751d87a2f62c6af910f67b82050 376 SUPERFAMILY SSF160544 250 355 3.01E-39 T 09-03-2017 IPR029025 Type III secretion system substrate exporter, C-terminal BV404_RS03645 f0b35751d87a2f62c6af910f67b82050 376 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 353 1.8E-135 T 09-03-2017 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 BV404_RS03645 f0b35751d87a2f62c6af910f67b82050 376 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 8.3E-122 T 09-03-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BV404_RS03645 f0b35751d87a2f62c6af910f67b82050 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 1.6E-39 T 09-03-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BV404_RS03645 f0b35751d87a2f62c6af910f67b82050 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 1.6E-39 T 09-03-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BV404_RS03645 f0b35751d87a2f62c6af910f67b82050 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 1.6E-39 T 09-03-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BV404_RS03645 f0b35751d87a2f62c6af910f67b82050 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 1.6E-39 T 09-03-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BV404_RS03645 f0b35751d87a2f62c6af910f67b82050 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 1.6E-39 T 09-03-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BV404_RS03645 f0b35751d87a2f62c6af910f67b82050 376 Gene3D G3DSA:3.40.1690.10 218 357 7.6E-62 T 09-03-2017 IPR029025 Type III secretion system substrate exporter, C-terminal BV404_RS08210 d85206219ca98c99eb2105a20167fc32 1012 Pfam PF13183 4Fe-4S dicluster domain 570 681 7.8E-12 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BV404_RS08210 d85206219ca98c99eb2105a20167fc32 1012 Pfam PF02913 FAD linked oxidases, C-terminal domain 276 534 1.5E-62 T 09-03-2017 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 BV404_RS08210 d85206219ca98c99eb2105a20167fc32 1012 Pfam PF01565 FAD binding domain 52 192 2.4E-35 T 09-03-2017 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 BV404_RS08210 d85206219ca98c99eb2105a20167fc32 1012 SUPERFAMILY SSF46548 517 617 9.94E-7 T 09-03-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 BV404_RS08210 d85206219ca98c99eb2105a20167fc32 1012 SUPERFAMILY SSF46548 647 685 9.94E-7 T 09-03-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 BV404_RS08210 d85206219ca98c99eb2105a20167fc32 1012 SUPERFAMILY SSF56176 18 192 5.14E-51 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 BV404_RS08210 d85206219ca98c99eb2105a20167fc32 1012 SUPERFAMILY SSF56176 235 277 5.14E-51 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 BV404_RS08210 d85206219ca98c99eb2105a20167fc32 1012 SUPERFAMILY SSF55103 253 538 1.42E-54 T 09-03-2017 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 BV404_RS08210 d85206219ca98c99eb2105a20167fc32 1012 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 667 678 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BV404_RS08210 d85206219ca98c99eb2105a20167fc32 1012 Gene3D G3DSA:3.30.43.10 7 109 1.9E-24 T 09-03-2017 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 BV404_RS08210 d85206219ca98c99eb2105a20167fc32 1012 Gene3D G3DSA:3.30.465.10 110 277 3.1E-42 T 09-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 BV404_RS08210 d85206219ca98c99eb2105a20167fc32 1012 Gene3D G3DSA:1.10.1060.10 511 614 3.2E-14 T 09-03-2017 BV404_RS08210 d85206219ca98c99eb2105a20167fc32 1012 Gene3D G3DSA:1.10.1060.10 646 696 3.2E-14 T 09-03-2017 BV404_RS09640 98bd819baeab0140246dc8a169338961 683 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 545 41.386 T 09-03-2017 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BV404_RS09640 98bd819baeab0140246dc8a169338961 683 SUPERFAMILY SSF50249 581 682 1.22E-34 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS09640 98bd819baeab0140246dc8a169338961 683 Gene3D G3DSA:1.10.730.10 380 534 4.7E-41 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BV404_RS09640 98bd819baeab0140246dc8a169338961 683 Gene3D G3DSA:2.40.50.140 576 682 3.0E-44 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS09640 98bd819baeab0140246dc8a169338961 683 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 9 535 1.9E-199 T 09-03-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BV404_RS09640 98bd819baeab0140246dc8a169338961 683 Pfam PF01588 Putative tRNA binding domain 588 680 4.6E-26 T 09-03-2017 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 BV404_RS09640 98bd819baeab0140246dc8a169338961 683 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 543 682 1.6E-46 T 09-03-2017 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BV404_RS09640 98bd819baeab0140246dc8a169338961 683 Gene3D G3DSA:2.20.28.20 145 176 5.5E-20 T 09-03-2017 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BV404_RS09640 98bd819baeab0140246dc8a169338961 683 Pfam PF09334 tRNA synthetases class I (M) 9 396 1.1E-164 T 09-03-2017 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 BV404_RS09640 98bd819baeab0140246dc8a169338961 683 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 6.8E-25 T 09-03-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BV404_RS09640 98bd819baeab0140246dc8a169338961 683 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 6.8E-25 T 09-03-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BV404_RS09640 98bd819baeab0140246dc8a169338961 683 PRINTS PR01041 Methionyl-tRNA synthetase signature 384 395 6.8E-25 T 09-03-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BV404_RS09640 98bd819baeab0140246dc8a169338961 683 PRINTS PR01041 Methionyl-tRNA synthetase signature 291 306 6.8E-25 T 09-03-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BV404_RS09640 98bd819baeab0140246dc8a169338961 683 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 6.8E-25 T 09-03-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BV404_RS09640 98bd819baeab0140246dc8a169338961 683 PRINTS PR01041 Methionyl-tRNA synthetase signature 251 262 6.8E-25 T 09-03-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BV404_RS09640 98bd819baeab0140246dc8a169338961 683 SUPERFAMILY SSF52374 5 141 1.46E-101 T 09-03-2017 BV404_RS09640 98bd819baeab0140246dc8a169338961 683 SUPERFAMILY SSF52374 176 387 1.46E-101 T 09-03-2017 BV404_RS09640 98bd819baeab0140246dc8a169338961 683 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 09-03-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BV404_RS09640 98bd819baeab0140246dc8a169338961 683 Gene3D G3DSA:3.40.50.620 183 379 4.6E-90 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS09640 98bd819baeab0140246dc8a169338961 683 Gene3D G3DSA:3.40.50.620 6 144 4.6E-90 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS09640 98bd819baeab0140246dc8a169338961 683 SUPERFAMILY SSF47323 386 596 1.01E-44 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BV404_RS09640 98bd819baeab0140246dc8a169338961 683 SUPERFAMILY SSF57770 142 176 5.89E-13 T 09-03-2017 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BV404_RS01940 2954ee413fb9dc31aeee7ffda343f253 173 PIRSF PIRSF038996 1 172 9.9E-56 T 09-03-2017 IPR010086 Flavodoxin, long chain GO:0010181 BV404_RS01940 2954ee413fb9dc31aeee7ffda343f253 173 SUPERFAMILY SSF52218 1 166 5.06E-47 T 09-03-2017 IPR029039 Flavoprotein-like domain BV404_RS01940 2954ee413fb9dc31aeee7ffda343f253 173 TIGRFAM TIGR01752 flav_long: flavodoxin 2 168 4.1E-65 T 09-03-2017 IPR010086 Flavodoxin, long chain GO:0010181 BV404_RS01940 2954ee413fb9dc31aeee7ffda343f253 173 Gene3D G3DSA:3.40.50.360 1 166 1.0E-55 T 09-03-2017 IPR029039 Flavoprotein-like domain BV404_RS01940 2954ee413fb9dc31aeee7ffda343f253 173 Pfam PF00258 Flavodoxin 5 161 1.7E-24 T 09-03-2017 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 BV404_RS03490 1d540524ddf4da7c911f203a7f3df0f0 338 Gene3D G3DSA:3.40.50.720 3 179 6.2E-49 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS03490 1d540524ddf4da7c911f203a7f3df0f0 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 324 1.2E-57 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS03490 1d540524ddf4da7c911f203a7f3df0f0 338 Gene3D G3DSA:3.90.25.10 180 232 1.1E-54 T 09-03-2017 BV404_RS03490 1d540524ddf4da7c911f203a7f3df0f0 338 Gene3D G3DSA:3.90.25.10 264 337 1.1E-54 T 09-03-2017 BV404_RS03490 1d540524ddf4da7c911f203a7f3df0f0 338 PRINTS PR01713 Nucleotide sugar epimerase signature 231 246 1.2E-5 T 09-03-2017 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 BV404_RS03490 1d540524ddf4da7c911f203a7f3df0f0 338 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 1.2E-5 T 09-03-2017 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 BV404_RS03490 1d540524ddf4da7c911f203a7f3df0f0 338 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 1.2E-5 T 09-03-2017 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 BV404_RS03490 1d540524ddf4da7c911f203a7f3df0f0 338 SUPERFAMILY SSF51735 3 336 1.22E-94 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS03490 1d540524ddf4da7c911f203a7f3df0f0 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 335 1.3E-139 T 09-03-2017 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 BV404_RS04670 ae1e49459fe003c37bbefee0defca5fd 258 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 15 254 5.0E-59 T 09-03-2017 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 BV404_RS04670 ae1e49459fe003c37bbefee0defca5fd 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 8.7E-24 T 09-03-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BV404_RS04670 ae1e49459fe003c37bbefee0defca5fd 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 179 201 8.7E-24 T 09-03-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BV404_RS04670 ae1e49459fe003c37bbefee0defca5fd 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 8.7E-24 T 09-03-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BV404_RS04670 ae1e49459fe003c37bbefee0defca5fd 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 201 220 8.7E-24 T 09-03-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BV404_RS04670 ae1e49459fe003c37bbefee0defca5fd 258 Pfam PF01311 Bacterial export proteins, family 1 14 242 1.4E-61 T 09-03-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BV404_RS01715 65f92ed2aee87a0464dbab2035cb4716 536 Pfam PF00890 FAD binding domain 10 392 1.1E-100 T 09-03-2017 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 BV404_RS01715 65f92ed2aee87a0464dbab2035cb4716 536 Gene3D G3DSA:3.50.50.60 3 243 1.3E-102 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS01715 65f92ed2aee87a0464dbab2035cb4716 536 Gene3D G3DSA:3.50.50.60 349 412 1.3E-102 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS01715 65f92ed2aee87a0464dbab2035cb4716 536 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 1.5E-5 T 09-03-2017 BV404_RS01715 65f92ed2aee87a0464dbab2035cb4716 536 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 370 377 1.5E-5 T 09-03-2017 BV404_RS01715 65f92ed2aee87a0464dbab2035cb4716 536 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 1.3E-8 T 09-03-2017 BV404_RS01715 65f92ed2aee87a0464dbab2035cb4716 536 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 1.3E-8 T 09-03-2017 BV404_RS01715 65f92ed2aee87a0464dbab2035cb4716 536 SUPERFAMILY SSF56425 238 353 1.18E-41 T 09-03-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 BV404_RS01715 65f92ed2aee87a0464dbab2035cb4716 536 SUPERFAMILY SSF51905 5 255 8.64E-75 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS01715 65f92ed2aee87a0464dbab2035cb4716 536 SUPERFAMILY SSF51905 356 447 8.64E-75 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS01715 65f92ed2aee87a0464dbab2035cb4716 536 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 521 9.8E-15 T 09-03-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BV404_RS01715 65f92ed2aee87a0464dbab2035cb4716 536 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 7 520 8.5E-211 T 09-03-2017 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 BV404_RS01715 65f92ed2aee87a0464dbab2035cb4716 536 SUPERFAMILY SSF46977 425 525 2.75E-32 T 09-03-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BV404_RS01715 65f92ed2aee87a0464dbab2035cb4716 536 PIRSF PIRSF000171 1 533 7.9E-39 T 09-03-2017 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit Reactome: R-HSA-611105|Reactome: R-HSA-71403 BV404_RS01715 65f92ed2aee87a0464dbab2035cb4716 536 Gene3D G3DSA:1.20.58.100 422 521 5.2E-34 T 09-03-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BV404_RS01715 65f92ed2aee87a0464dbab2035cb4716 536 Gene3D G3DSA:3.90.700.10 244 348 5.5E-38 T 09-03-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 BV404_RS03685 3c04b3a9f18b0c08055064cb3c42d8e9 87 Pfam PF08891 YfcL protein 4 84 7.5E-32 T 09-03-2017 IPR014987 Uncharacterised protein family YfcL BV404_RS02885 fb6512f31fc92d2949ac9ab6c293b7d6 280 Hamap MF_01974 Methionine aminopeptidase [map]. 3 268 41.837 T 09-03-2017 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 BV404_RS02885 fb6512f31fc92d2949ac9ab6c293b7d6 280 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 185 203 - T 09-03-2017 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 BV404_RS02885 fb6512f31fc92d2949ac9ab6c293b7d6 280 SUPERFAMILY SSF55920 4 268 2.22E-87 T 09-03-2017 IPR000994 Peptidase M24, structural domain BV404_RS02885 fb6512f31fc92d2949ac9ab6c293b7d6 280 Gene3D G3DSA:3.90.230.10 4 273 1.6E-95 T 09-03-2017 IPR000994 Peptidase M24, structural domain BV404_RS02885 fb6512f31fc92d2949ac9ab6c293b7d6 280 Pfam PF00557 Metallopeptidase family M24 12 259 1.0E-50 T 09-03-2017 IPR000994 Peptidase M24, structural domain BV404_RS02885 fb6512f31fc92d2949ac9ab6c293b7d6 280 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 4 267 1.9E-90 T 09-03-2017 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 BV404_RS02885 fb6512f31fc92d2949ac9ab6c293b7d6 280 PRINTS PR00599 Methionine aminopeptidase-1 signature 209 221 2.9E-15 T 09-03-2017 IPR001714 Peptidase M24, methionine aminopeptidase BV404_RS02885 fb6512f31fc92d2949ac9ab6c293b7d6 280 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 2.9E-15 T 09-03-2017 IPR001714 Peptidase M24, methionine aminopeptidase BV404_RS02885 fb6512f31fc92d2949ac9ab6c293b7d6 280 PRINTS PR00599 Methionine aminopeptidase-1 signature 179 191 2.9E-15 T 09-03-2017 IPR001714 Peptidase M24, methionine aminopeptidase BV404_RS02755 d0e1ad3cc5636a875617e16fe982e0c2 332 Gene3D G3DSA:2.40.50.100 228 289 8.0E-5 T 09-03-2017 BV404_RS02755 d0e1ad3cc5636a875617e16fe982e0c2 332 Gene3D G3DSA:3.40.630.10 10 208 5.5E-26 T 09-03-2017 BV404_RS02755 d0e1ad3cc5636a875617e16fe982e0c2 332 SUPERFAMILY SSF53187 2 294 1.82E-75 T 09-03-2017 BV404_RS02755 d0e1ad3cc5636a875617e16fe982e0c2 332 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 26 293 1.2E-66 T 09-03-2017 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 BV404_RS02755 d0e1ad3cc5636a875617e16fe982e0c2 332 PIRSF PIRSF039012 1 301 1.1E-89 T 09-03-2017 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 BV404_RS13370 6236d41fd5dbf72bd15dc1aea39001f4 192 Gene3D G3DSA:3.40.470.10 4 187 1.9E-45 T 09-03-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BV404_RS13370 6236d41fd5dbf72bd15dc1aea39001f4 192 Pfam PF03167 Uracil DNA glycosylase superfamily 30 177 2.6E-26 T 09-03-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BV404_RS13370 6236d41fd5dbf72bd15dc1aea39001f4 192 SMART SM00986 26 182 5.6E-30 T 09-03-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BV404_RS13370 6236d41fd5dbf72bd15dc1aea39001f4 192 SMART SM00987 26 182 5.6E-30 T 09-03-2017 BV404_RS13370 6236d41fd5dbf72bd15dc1aea39001f4 192 SUPERFAMILY SSF52141 4 186 1.54E-57 T 09-03-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BV404_RS04690 59a52c25a37a867b2176ae315f8a8630 272 Gene3D G3DSA:2.30.330.10 192 262 2.2E-6 T 09-03-2017 BV404_RS04690 59a52c25a37a867b2176ae315f8a8630 272 SUPERFAMILY SSF101801 197 264 1.31E-9 T 09-03-2017 IPR001543 Surface presentation of antigen (SpoA) BV404_RS04690 59a52c25a37a867b2176ae315f8a8630 272 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 200 262 5.4E-12 T 09-03-2017 IPR001543 Surface presentation of antigen (SpoA) BV404_RS05955 ae1d3ee1b6ce051800596880f1bbd5a9 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 1.6E-15 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BV404_RS05955 ae1d3ee1b6ce051800596880f1bbd5a9 330 Pfam PF00005 ABC transporter 24 187 1.1E-25 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS05955 ae1d3ee1b6ce051800596880f1bbd5a9 330 Gene3D G3DSA:3.40.50.300 2 260 2.1E-55 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS05955 ae1d3ee1b6ce051800596880f1bbd5a9 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 1.5E-20 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BV404_RS05955 ae1d3ee1b6ce051800596880f1bbd5a9 330 SUPERFAMILY SSF52540 3 268 1.28E-48 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS05915 573586b7baf3361c15dc18d1d68c637e 820 Gene3D G3DSA:3.40.228.10 186 394 3.2E-54 T 09-03-2017 BV404_RS05915 573586b7baf3361c15dc18d1d68c637e 820 Pfam PF01568 Molydopterin dinucleotide binding domain 676 796 4.1E-23 T 09-03-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 BV404_RS05915 573586b7baf3361c15dc18d1d68c637e 820 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 716 743 - T 09-03-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 BV404_RS05915 573586b7baf3361c15dc18d1d68c637e 820 Gene3D G3DSA:3.40.50.740 395 504 1.6E-50 T 09-03-2017 BV404_RS05915 573586b7baf3361c15dc18d1d68c637e 820 Gene3D G3DSA:3.40.50.740 81 181 1.6E-50 T 09-03-2017 BV404_RS05915 573586b7baf3361c15dc18d1d68c637e 820 SUPERFAMILY SSF50692 669 817 1.54E-41 T 09-03-2017 IPR009010 Aspartate decarboxylase-like domain BV404_RS05915 573586b7baf3361c15dc18d1d68c637e 820 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 503 520 - T 09-03-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 BV404_RS05915 573586b7baf3361c15dc18d1d68c637e 820 Gene3D G3DSA:2.40.40.20 649 812 6.0E-54 T 09-03-2017 BV404_RS05915 573586b7baf3361c15dc18d1d68c637e 820 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 31 3.3E-4 T 09-03-2017 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal BV404_RS05915 573586b7baf3361c15dc18d1d68c637e 820 Pfam PF00384 Molybdopterin oxidoreductase 87 560 3.0E-78 T 09-03-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BV404_RS05915 573586b7baf3361c15dc18d1d68c637e 820 SUPERFAMILY SSF53706 42 660 2.88E-165 T 09-03-2017 BV404_RS05915 573586b7baf3361c15dc18d1d68c637e 820 Gene3D G3DSA:3.90.55.10 505 608 1.3E-34 T 09-03-2017 BV404_RS05915 573586b7baf3361c15dc18d1d68c637e 820 TIGRFAM TIGR02164 torA: trimethylamine-N-oxide reductase TorA 1 819 0.0 T 09-03-2017 IPR011887 Trimethylamine-N-oxide reductase TorA GO:0030151|GO:0042597|GO:0050626 BV404_RS06480 b7b166dff23c03ec0b97dbb28688cb5e 455 SMART SM01049 42 133 9.2E-32 T 09-03-2017 IPR033480 Single Cache domain 2 BV404_RS06480 b7b166dff23c03ec0b97dbb28688cb5e 455 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 357 446 3.8E-7 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS06480 b7b166dff23c03ec0b97dbb28688cb5e 455 PIRSF PIRSF037314 1 455 2.9E-185 T 09-03-2017 IPR017171 Signal transduction histidine kinase, MctS BV404_RS06480 b7b166dff23c03ec0b97dbb28688cb5e 455 Gene3D G3DSA:3.30.565.10 337 446 3.5E-12 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS06480 b7b166dff23c03ec0b97dbb28688cb5e 455 Gene3D G3DSA:3.30.450.20 37 184 3.1E-50 T 09-03-2017 BV404_RS06480 b7b166dff23c03ec0b97dbb28688cb5e 455 Pfam PF17200 Single Cache domain 2 45 192 3.4E-43 T 09-03-2017 IPR033480 Single Cache domain 2 BV404_RS06480 b7b166dff23c03ec0b97dbb28688cb5e 455 SUPERFAMILY SSF55874 323 444 4.85E-19 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS06480 b7b166dff23c03ec0b97dbb28688cb5e 455 SMART SM00387 354 448 5.3E-8 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS06480 b7b166dff23c03ec0b97dbb28688cb5e 455 Pfam PF07730 Histidine kinase 250 315 3.6E-16 T 09-03-2017 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 BV404_RS01260 76851e1e06a0d38f4b2c51d8a42abb93 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 4.9E-27 T 09-03-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 BV404_RS01260 76851e1e06a0d38f4b2c51d8a42abb93 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 1.2E-32 T 09-03-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 BV404_RS01260 76851e1e06a0d38f4b2c51d8a42abb93 95 SUPERFAMILY SSF69754 1 95 2.35E-33 T 09-03-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 BV404_RS01260 76851e1e06a0d38f4b2c51d8a42abb93 95 Gene3D G3DSA:3.30.160.100 1 95 7.8E-37 T 09-03-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 BV404_RS13460 be88c449c4121d27bf97d3466ff64bd8 470 Pfam PF14524 Wzt C-terminal domain 321 459 2.7E-24 T 09-03-2017 IPR029439 Wzt, C-terminal BV404_RS13460 be88c449c4121d27bf97d3466ff64bd8 470 Gene3D G3DSA:3.40.50.300 5 248 9.2E-47 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS13460 be88c449c4121d27bf97d3466ff64bd8 470 Pfam PF00005 ABC transporter 54 186 2.1E-21 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS13460 be88c449c4121d27bf97d3466ff64bd8 470 Gene3D G3DSA:2.70.50.60 310 451 2.0E-33 T 09-03-2017 BV404_RS13460 be88c449c4121d27bf97d3466ff64bd8 470 SMART SM00382 63 243 1.2E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS13460 be88c449c4121d27bf97d3466ff64bd8 470 SUPERFAMILY SSF52540 46 250 8.42E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS03575 953e1cab9199be0f55760e10ecc46f0e 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 67 83 9.3E-13 T 09-03-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BV404_RS03575 953e1cab9199be0f55760e10ecc46f0e 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 32 48 9.3E-13 T 09-03-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BV404_RS03575 953e1cab9199be0f55760e10ecc46f0e 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 88 101 9.3E-13 T 09-03-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BV404_RS03575 953e1cab9199be0f55760e10ecc46f0e 103 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 8 102 7.9E-20 T 09-03-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BV404_RS03575 953e1cab9199be0f55760e10ecc46f0e 103 Pfam PF02049 Flagellar hook-basal body complex protein FliE 17 103 6.3E-30 T 09-03-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BV404_RS03575 953e1cab9199be0f55760e10ecc46f0e 103 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 4 103 16.668 T 09-03-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BV404_RS21315 b9cf5ee8c12147e8457325a5747229f3 192 Gene3D G3DSA:2.40.160.20 46 183 5.4E-7 T 09-03-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 BV404_RS21315 b9cf5ee8c12147e8457325a5747229f3 192 SUPERFAMILY SSF56925 60 185 1.86E-9 T 09-03-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 BV404_RS04080 c308440f63ef8fa3dfd347448598f0de 355 SUPERFAMILY SSF54506 175 353 2.98E-56 T 09-03-2017 BV404_RS04080 c308440f63ef8fa3dfd347448598f0de 355 Pfam PF04303 PrpF protein 8 353 2.8E-116 T 09-03-2017 IPR007400 PrpF protein BV404_RS04080 c308440f63ef8fa3dfd347448598f0de 355 SUPERFAMILY SSF54506 8 171 1.02E-61 T 09-03-2017 BV404_RS04080 c308440f63ef8fa3dfd347448598f0de 355 Gene3D G3DSA:3.10.310.10 180 336 1.7E-51 T 09-03-2017 BV404_RS04080 c308440f63ef8fa3dfd347448598f0de 355 Gene3D G3DSA:3.10.310.10 9 179 6.6E-76 T 09-03-2017 BV404_RS06955 30e212a6ef370a841d8b583cd6b02d20 685 SUPERFAMILY SSF58104 375 683 4.71E-59 T 09-03-2017 BV404_RS06955 30e212a6ef370a841d8b583cd6b02d20 685 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 487 680 1.6E-40 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 BV404_RS06955 30e212a6ef370a841d8b583cd6b02d20 685 SMART SM00283 422 683 3.6E-40 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 BV404_RS06955 30e212a6ef370a841d8b583cd6b02d20 685 Gene3D G3DSA:1.10.287.950 437 654 4.4E-48 T 09-03-2017 BV404_RS00500 05aa2135728053c27ec2854c709ffc7c 141 Gene3D G3DSA:1.10.10.60 21 110 5.8E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS00500 05aa2135728053c27ec2854c709ffc7c 141 SUPERFAMILY SSF46689 15 115 2.51E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS14460 05aa2135728053c27ec2854c709ffc7c 141 Gene3D G3DSA:1.10.10.60 21 110 5.8E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS14460 05aa2135728053c27ec2854c709ffc7c 141 SUPERFAMILY SSF46689 15 115 2.51E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS09100 05aa2135728053c27ec2854c709ffc7c 141 Gene3D G3DSA:1.10.10.60 21 110 5.8E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS09100 05aa2135728053c27ec2854c709ffc7c 141 SUPERFAMILY SSF46689 15 115 2.51E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS01370 05aa2135728053c27ec2854c709ffc7c 141 Gene3D G3DSA:1.10.10.60 21 110 5.8E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS01370 05aa2135728053c27ec2854c709ffc7c 141 SUPERFAMILY SSF46689 15 115 2.51E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS07735 bf1044be941373f6902e601d18295d3f 119 ProSitePatterns PS00018 EF-hand calcium-binding domain. 93 105 - T 09-03-2017 IPR018247 EF-Hand 1, calcium-binding site BV404_RS07735 bf1044be941373f6902e601d18295d3f 119 SUPERFAMILY SSF47473 44 111 1.82E-10 T 09-03-2017 IPR011992 EF-hand domain pair BV404_RS07735 bf1044be941373f6902e601d18295d3f 119 SMART SM00054 84 112 1.1 T 09-03-2017 IPR002048 EF-hand domain GO:0005509 BV404_RS07735 bf1044be941373f6902e601d18295d3f 119 SMART SM00054 40 68 8.7 T 09-03-2017 IPR002048 EF-hand domain GO:0005509 BV404_RS07735 bf1044be941373f6902e601d18295d3f 119 ProSitePatterns PS00018 EF-hand calcium-binding domain. 49 61 - T 09-03-2017 IPR018247 EF-Hand 1, calcium-binding site BV404_RS07735 bf1044be941373f6902e601d18295d3f 119 Gene3D G3DSA:1.10.238.10 45 107 3.3E-12 T 09-03-2017 IPR011992 EF-hand domain pair BV404_RS07735 bf1044be941373f6902e601d18295d3f 119 Pfam PF13499 EF-hand domain pair 45 107 1.4E-8 T 09-03-2017 IPR002048 EF-hand domain GO:0005509 BV404_RS14245 2406738ff471c7e7d3f208be0fd51a03 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 134 1.5E-43 T 09-03-2017 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 BV404_RS14245 2406738ff471c7e7d3f208be0fd51a03 140 SUPERFAMILY SSF51344 5 87 4.58E-24 T 09-03-2017 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 BV404_RS14245 2406738ff471c7e7d3f208be0fd51a03 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 91 2.0E-38 T 09-03-2017 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 BV404_RS14245 2406738ff471c7e7d3f208be0fd51a03 140 SUPERFAMILY SSF46604 89 138 1.57E-14 T 09-03-2017 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210 BV404_RS14245 2406738ff471c7e7d3f208be0fd51a03 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 4 132 20.365 T 09-03-2017 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 BV404_RS14245 2406738ff471c7e7d3f208be0fd51a03 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 85 8.7E-29 T 09-03-2017 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 BV404_RS14245 2406738ff471c7e7d3f208be0fd51a03 140 Gene3D G3DSA:2.60.15.10 5 92 4.8E-29 T 09-03-2017 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 BV404_RS14245 2406738ff471c7e7d3f208be0fd51a03 140 Gene3D G3DSA:1.20.5.440 93 135 5.7E-23 T 09-03-2017 BV404_RS14245 2406738ff471c7e7d3f208be0fd51a03 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 134 7.9E-11 T 09-03-2017 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210 BV404_RS12895 15549a99c738c136ba9ca14339459e90 240 Pfam PF08348 YheO-like PAS domain 31 139 3.7E-35 T 09-03-2017 IPR013559 YheO-like BV404_RS12895 15549a99c738c136ba9ca14339459e90 240 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 30 143 3.0E-61 T 09-03-2017 IPR013559 YheO-like BV404_RS12895 15549a99c738c136ba9ca14339459e90 240 Pfam PF13309 HTH domain 174 231 6.0E-18 T 09-03-2017 BV404_RS11860 c734aaa0573d88a382a92972958d3c2a 376 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 374 1.4E-159 T 09-03-2017 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 BV404_RS11860 c734aaa0573d88a382a92972958d3c2a 376 PIRSF PIRSF015658 2 376 2.1E-179 T 09-03-2017 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 BV404_RS11860 c734aaa0573d88a382a92972958d3c2a 376 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 370 4.7E-172 T 09-03-2017 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 BV404_RS01340 3a6a4f422c2def5eb40b3bc3994b6d74 129 Gene3D G3DSA:3.30.1330.40 5 128 1.4E-47 T 09-03-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like BV404_RS01340 3a6a4f422c2def5eb40b3bc3994b6d74 129 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 104 122 - T 09-03-2017 IPR019897 RidA, conserved site BV404_RS01340 3a6a4f422c2def5eb40b3bc3994b6d74 129 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 127 8.2E-53 T 09-03-2017 IPR006056 RidA family BV404_RS01340 3a6a4f422c2def5eb40b3bc3994b6d74 129 Pfam PF01042 Endoribonuclease L-PSP 8 127 5.6E-44 T 09-03-2017 IPR006175 YjgF/YER057c/UK114 family BV404_RS01340 3a6a4f422c2def5eb40b3bc3994b6d74 129 SUPERFAMILY SSF55298 2 128 6.75E-45 T 09-03-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like BV404_RS13660 6a02553c09f3e56436e767ac23f4d534 162 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 1 161 3.7E-65 T 09-03-2017 IPR020761 Uncharacterised protein family UPF0114, bacteria BV404_RS13660 6a02553c09f3e56436e767ac23f4d534 162 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 162 83.121 T 09-03-2017 IPR020765 Uncharacterised protein family UPF0114, gammaproteobacteria GO:0005886 BV404_RS13660 6a02553c09f3e56436e767ac23f4d534 162 Pfam PF03350 Uncharacterized protein family, UPF0114 9 125 3.9E-33 T 09-03-2017 IPR005134 Uncharacterised protein family UPF0114 BV404_RS13960 959225dc84384f29442fa6730f4f9574 158 Hamap MF_00598 Protein Smg [smg]. 2 158 33.049 T 09-03-2017 IPR007456 Smg BV404_RS13960 959225dc84384f29442fa6730f4f9574 158 Pfam PF04361 Protein of unknown function (DUF494) 2 158 6.3E-60 T 09-03-2017 IPR007456 Smg BV404_RS14725 04be8e1bfb8c9ae6b85cc34aa49af322 408 Gene3D G3DSA:3.20.20.450 81 185 1.3E-12 T 09-03-2017 IPR001633 EAL domain BV404_RS14725 04be8e1bfb8c9ae6b85cc34aa49af322 408 Pfam PF08668 HDOD domain 208 324 2.9E-15 T 09-03-2017 IPR013976 Metal-dependent hydrolase HDOD BV404_RS14725 04be8e1bfb8c9ae6b85cc34aa49af322 408 PIRSF PIRSF003180 1 408 4.3E-171 T 09-03-2017 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing BV404_RS14725 04be8e1bfb8c9ae6b85cc34aa49af322 408 SMART SM00052 6 199 0.002 T 09-03-2017 IPR001633 EAL domain BV404_RS14725 04be8e1bfb8c9ae6b85cc34aa49af322 408 SUPERFAMILY SSF141868 5 200 2.88E-27 T 09-03-2017 IPR001633 EAL domain BV404_RS14725 04be8e1bfb8c9ae6b85cc34aa49af322 408 Gene3D G3DSA:1.10.3150.10 186 352 4.9E-33 T 09-03-2017 IPR013976 Metal-dependent hydrolase HDOD BV404_RS14725 04be8e1bfb8c9ae6b85cc34aa49af322 408 Pfam PF00563 EAL domain 81 194 5.7E-12 T 09-03-2017 IPR001633 EAL domain BV404_RS14725 04be8e1bfb8c9ae6b85cc34aa49af322 408 SUPERFAMILY SSF109604 185 404 1.22E-41 T 09-03-2017 BV404_RS09545 79688fc037a3c673618058fbdf1e022c 685 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 544 682 1.5E-48 T 09-03-2017 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS09545 79688fc037a3c673618058fbdf1e022c 685 SUPERFAMILY SSF48019 243 361 1.02E-32 T 09-03-2017 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 BV404_RS09545 79688fc037a3c673618058fbdf1e022c 685 Gene3D G3DSA:1.10.8.60 167 242 4.7E-32 T 09-03-2017 BV404_RS09545 79688fc037a3c673618058fbdf1e022c 685 SMART SM00382 37 179 8.2E-6 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS09545 79688fc037a3c673618058fbdf1e022c 685 Pfam PF13177 DNA polymerase III, delta subunit 20 178 4.2E-44 T 09-03-2017 BV404_RS09545 79688fc037a3c673618058fbdf1e022c 685 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 234 361 1.1E-30 T 09-03-2017 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 BV404_RS09545 79688fc037a3c673618058fbdf1e022c 685 SUPERFAMILY SSF52540 32 222 1.98E-56 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09545 79688fc037a3c673618058fbdf1e022c 685 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 3.3E-132 T 09-03-2017 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 BV404_RS09545 79688fc037a3c673618058fbdf1e022c 685 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 468 542 1.3E-22 T 09-03-2017 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS09545 79688fc037a3c673618058fbdf1e022c 685 Gene3D G3DSA:1.20.272.10 243 360 2.8E-44 T 09-03-2017 BV404_RS09545 79688fc037a3c673618058fbdf1e022c 685 Gene3D G3DSA:3.40.50.300 15 166 1.4E-66 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS08495 67e29a0347f56da5206585a2a6cd6af3 419 Gene3D G3DSA:1.10.3860.10 12 408 6.5E-111 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BV404_RS08495 67e29a0347f56da5206585a2a6cd6af3 419 SUPERFAMILY SSF118215 15 403 1.83E-107 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BV404_RS08495 67e29a0347f56da5206585a2a6cd6af3 419 Pfam PF00375 Sodium:dicarboxylate symporter family 15 403 2.0E-116 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BV404_RS08495 67e29a0347f56da5206585a2a6cd6af3 419 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 1.9E-53 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BV404_RS08495 67e29a0347f56da5206585a2a6cd6af3 419 PRINTS PR00173 Glutamate-aspartate symporter signature 230 249 1.9E-53 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BV404_RS08495 67e29a0347f56da5206585a2a6cd6af3 419 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 1.9E-53 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BV404_RS08495 67e29a0347f56da5206585a2a6cd6af3 419 PRINTS PR00173 Glutamate-aspartate symporter signature 358 378 1.9E-53 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BV404_RS08495 67e29a0347f56da5206585a2a6cd6af3 419 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 1.9E-53 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BV404_RS08495 67e29a0347f56da5206585a2a6cd6af3 419 PRINTS PR00173 Glutamate-aspartate symporter signature 78 103 1.9E-53 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BV404_RS08495 67e29a0347f56da5206585a2a6cd6af3 419 PRINTS PR00173 Glutamate-aspartate symporter signature 147 169 1.9E-53 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BV404_RS08495 67e29a0347f56da5206585a2a6cd6af3 419 PRINTS PR00173 Glutamate-aspartate symporter signature 48 68 1.9E-53 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BV404_RS08495 67e29a0347f56da5206585a2a6cd6af3 419 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 1.9E-53 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BV404_RS07475 606974ea064dd331503becfe6807e9ae 1307 Pfam PF11898 Domain of unknown function (DUF3418) 721 1305 2.3E-234 T 09-03-2017 IPR024590 RNA helicase HrpA, C-terminal BV404_RS07475 606974ea064dd331503becfe6807e9ae 1307 SMART SM00847 473 568 1.9E-39 T 09-03-2017 IPR007502 Helicase-associated domain GO:0004386 BV404_RS07475 606974ea064dd331503becfe6807e9ae 1307 Pfam PF04408 Helicase associated domain (HA2) 475 567 1.4E-18 T 09-03-2017 IPR007502 Helicase-associated domain GO:0004386 BV404_RS07475 606974ea064dd331503becfe6807e9ae 1307 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 23 1305 0.0 T 09-03-2017 IPR010222 RNA helicase HrpA GO:0004004 BV404_RS07475 606974ea064dd331503becfe6807e9ae 1307 SMART SM00382 102 393 4.4E-6 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS07475 606974ea064dd331503becfe6807e9ae 1307 SUPERFAMILY SSF52540 84 613 1.58E-112 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS07475 606974ea064dd331503becfe6807e9ae 1307 SMART SM00487 82 269 2.0E-29 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain BV404_RS07475 606974ea064dd331503becfe6807e9ae 1307 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 611 707 7.1E-18 T 09-03-2017 IPR011709 Domain of unknown function DUF1605 BV404_RS07475 606974ea064dd331503becfe6807e9ae 1307 Pfam PF00270 DEAD/DEAH box helicase 97 243 2.7E-7 T 09-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BV404_RS07475 606974ea064dd331503becfe6807e9ae 1307 SMART SM00490 313 413 7.2E-15 T 09-03-2017 IPR001650 Helicase, C-terminal BV404_RS07475 606974ea064dd331503becfe6807e9ae 1307 Pfam PF00271 Helicase conserved C-terminal domain 299 412 2.2E-10 T 09-03-2017 IPR001650 Helicase, C-terminal BV404_RS07475 606974ea064dd331503becfe6807e9ae 1307 Gene3D G3DSA:3.40.50.300 281 425 1.6E-11 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS07475 606974ea064dd331503becfe6807e9ae 1307 Gene3D G3DSA:3.40.50.300 87 243 2.3E-48 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS05450 7b214f50e9cfccbbf12adce8f4e1201d 321 Gene3D G3DSA:3.40.50.2300 156 287 2.5E-46 T 09-03-2017 BV404_RS05450 7b214f50e9cfccbbf12adce8f4e1201d 321 Gene3D G3DSA:3.40.50.2300 27 155 3.2E-59 T 09-03-2017 BV404_RS05450 7b214f50e9cfccbbf12adce8f4e1201d 321 SUPERFAMILY SSF53822 45 249 4.42E-19 T 09-03-2017 IPR028082 Periplasmic binding protein-like I BV404_RS05450 7b214f50e9cfccbbf12adce8f4e1201d 321 Pfam PF04392 ABC transporter substrate binding protein 29 321 2.4E-118 T 09-03-2017 IPR007487 ABC transporter, substrate-binding protein BV404_RS13805 9ac110e7ef70d799b0c08798f8dc161a 518 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 72 93 - T 09-03-2017 IPR023765 Solute-binding protein family 5, conserved site BV404_RS13805 9ac110e7ef70d799b0c08798f8dc161a 518 SUPERFAMILY SSF53850 26 517 5.97E-129 T 09-03-2017 BV404_RS13805 9ac110e7ef70d799b0c08798f8dc161a 518 Gene3D G3DSA:3.10.105.10 285 487 2.5E-57 T 09-03-2017 BV404_RS13805 9ac110e7ef70d799b0c08798f8dc161a 518 PIRSF PIRSF002741 19 504 4.2E-94 T 09-03-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 BV404_RS13805 9ac110e7ef70d799b0c08798f8dc161a 518 Gene3D G3DSA:3.40.190.10 125 284 1.2E-37 T 09-03-2017 BV404_RS13805 9ac110e7ef70d799b0c08798f8dc161a 518 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 67 425 7.1E-85 T 09-03-2017 IPR000914 Solute-binding protein family 5 domain BV404_RS02990 d2af64274d2c71b2090dfd277fd5c66c 287 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 67 271 5.9E-13 T 09-03-2017 IPR005135 Endonuclease/exonuclease/phosphatase BV404_RS02990 d2af64274d2c71b2090dfd277fd5c66c 287 Gene3D G3DSA:3.60.10.10 59 256 1.1E-9 T 09-03-2017 IPR005135 Endonuclease/exonuclease/phosphatase BV404_RS02990 d2af64274d2c71b2090dfd277fd5c66c 287 SUPERFAMILY SSF56219 60 278 1.96E-26 T 09-03-2017 IPR005135 Endonuclease/exonuclease/phosphatase BV404_RS02990 d2af64274d2c71b2090dfd277fd5c66c 287 Hamap MF_01119 UPF0294 protein YafD [yafD]. 1 279 51.853 T 09-03-2017 IPR022958 Uncharacterised protein family UPF0294 BV404_RS00350 ae3e90d43c2366c531c32d19d41b6a16 463 Pfam PF00860 Permease family 23 415 1.3E-97 T 09-03-2017 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 BV404_RS00350 ae3e90d43c2366c531c32d19d41b6a16 463 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 363 383 - T 09-03-2017 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 BV404_RS00350 ae3e90d43c2366c531c32d19d41b6a16 463 TIGRFAM TIGR03173 pbuX: xanthine permease 28 447 3.5E-130 T 09-03-2017 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 BV404_RS00350 ae3e90d43c2366c531c32d19d41b6a16 463 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 18 445 1.6E-126 T 09-03-2017 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 BV404_RS05985 29cfdf661b428ffd98124e9a7b428d6b 77 Pfam PF06667 Phage shock protein B 4 74 5.9E-32 T 09-03-2017 IPR009554 Phage shock protein B GO:0006355|GO:0009271 BV404_RS05985 29cfdf661b428ffd98124e9a7b428d6b 77 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 74 5.2E-33 T 09-03-2017 IPR009554 Phage shock protein B GO:0006355|GO:0009271 BV404_RS11640 ed22c9634a20eda35b094a7506ba3c23 406 Gene3D G3DSA:3.30.1330.20 215 321 3.5E-47 T 09-03-2017 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-983189 BV404_RS11640 ed22c9634a20eda35b094a7506ba3c23 406 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 393 38.261 T 09-03-2017 IPR000158 Cell division protein FtsZ GO:0005525 BV404_RS11640 ed22c9634a20eda35b094a7506ba3c23 406 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 09-03-2017 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 BV404_RS11640 ed22c9634a20eda35b094a7506ba3c23 406 PRINTS PR00423 Cell division protein FtsZ signature 126 147 4.7E-52 T 09-03-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 BV404_RS11640 ed22c9634a20eda35b094a7506ba3c23 406 PRINTS PR00423 Cell division protein FtsZ signature 189 211 4.7E-52 T 09-03-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 BV404_RS11640 ed22c9634a20eda35b094a7506ba3c23 406 PRINTS PR00423 Cell division protein FtsZ signature 98 118 4.7E-52 T 09-03-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 BV404_RS11640 ed22c9634a20eda35b094a7506ba3c23 406 PRINTS PR00423 Cell division protein FtsZ signature 212 233 4.7E-52 T 09-03-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 BV404_RS11640 ed22c9634a20eda35b094a7506ba3c23 406 SUPERFAMILY SSF52490 13 208 3.53E-69 T 09-03-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 BV404_RS11640 ed22c9634a20eda35b094a7506ba3c23 406 SMART SM00865 207 325 1.1E-55 T 09-03-2017 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-983189 BV404_RS11640 ed22c9634a20eda35b094a7506ba3c23 406 Pfam PF12327 FtsZ family, C-terminal domain 222 316 3.8E-36 T 09-03-2017 IPR024757 Cell division protein FtsZ, C-terminal BV404_RS11640 ed22c9634a20eda35b094a7506ba3c23 406 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 1.3E-39 T 09-03-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 BV404_RS11640 ed22c9634a20eda35b094a7506ba3c23 406 Gene3D G3DSA:3.40.50.1440 14 214 1.8E-93 T 09-03-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 BV404_RS11640 ed22c9634a20eda35b094a7506ba3c23 406 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 332 6.8E-137 T 09-03-2017 IPR000158 Cell division protein FtsZ GO:0005525 BV404_RS11640 ed22c9634a20eda35b094a7506ba3c23 406 SUPERFAMILY SSF55307 204 320 9.61E-43 T 09-03-2017 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 BV404_RS11640 ed22c9634a20eda35b094a7506ba3c23 406 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 09-03-2017 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 BV404_RS11640 ed22c9634a20eda35b094a7506ba3c23 406 SMART SM00864 13 205 6.0E-114 T 09-03-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 BV404_RS11110 70cc02eb51409eaf6689189eeb2e5ba7 221 TIGRFAM TIGR02451 anti_sig_ChrR: anti-sigma factor, putative, ChrR family 3 218 4.4E-76 T 09-03-2017 IPR012807 Anti-sigma factor ChrR, putative BV404_RS11110 70cc02eb51409eaf6689189eeb2e5ba7 221 Pfam PF13490 Putative zinc-finger 8 37 2.0E-5 T 09-03-2017 IPR027383 Putative zinc-finger BV404_RS11110 70cc02eb51409eaf6689189eeb2e5ba7 221 SUPERFAMILY SSF51182 110 205 2.17E-16 T 09-03-2017 IPR011051 RmlC-like cupin domain BV404_RS11110 70cc02eb51409eaf6689189eeb2e5ba7 221 Gene3D G3DSA:2.60.120.10 112 205 1.3E-14 T 09-03-2017 IPR014710 RmlC-like jelly roll fold BV404_RS11110 70cc02eb51409eaf6689189eeb2e5ba7 221 Pfam PF12973 ChrR Cupin-like domain 113 195 1.3E-14 T 09-03-2017 IPR025979 ChrR-like cupin domain BV404_RS07085 87ab4edec754e91246cc942efedfc9cf 346 SUPERFAMILY SSF53850 24 342 1.04E-95 T 09-03-2017 BV404_RS07085 87ab4edec754e91246cc942efedfc9cf 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 73 87 1.3E-86 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BV404_RS07085 87ab4edec754e91246cc942efedfc9cf 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 290 316 1.3E-86 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BV404_RS07085 87ab4edec754e91246cc942efedfc9cf 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 46 67 1.3E-86 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BV404_RS07085 87ab4edec754e91246cc942efedfc9cf 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 164 183 1.3E-86 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BV404_RS07085 87ab4edec754e91246cc942efedfc9cf 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 30 46 1.3E-86 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BV404_RS07085 87ab4edec754e91246cc942efedfc9cf 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 89 102 1.3E-86 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BV404_RS07085 87ab4edec754e91246cc942efedfc9cf 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 245 264 1.3E-86 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BV404_RS07085 87ab4edec754e91246cc942efedfc9cf 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 201 220 1.3E-86 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BV404_RS07085 87ab4edec754e91246cc942efedfc9cf 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 120 136 1.3E-86 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BV404_RS07085 87ab4edec754e91246cc942efedfc9cf 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 146 160 1.3E-86 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BV404_RS07085 87ab4edec754e91246cc942efedfc9cf 346 PIRSF PIRSF019574 1 345 1.2E-124 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BV404_RS07085 87ab4edec754e91246cc942efedfc9cf 346 Gene3D G3DSA:3.40.190.10 268 311 3.7E-64 T 09-03-2017 BV404_RS07085 87ab4edec754e91246cc942efedfc9cf 346 Gene3D G3DSA:3.40.190.10 23 129 3.7E-64 T 09-03-2017 BV404_RS07085 87ab4edec754e91246cc942efedfc9cf 346 Pfam PF13416 Bacterial extracellular solute-binding protein 40 311 5.4E-44 T 09-03-2017 BV404_RS07085 87ab4edec754e91246cc942efedfc9cf 346 Gene3D G3DSA:3.40.190.10 131 267 1.9E-24 T 09-03-2017 BV404_RS22105 cb80de7c799891af194d25065f445b8d 206 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 4 93 4.8E-32 T 09-03-2017 IPR008766 Replication gene A protein GO:0006260 BV404_RS05970 dbcc4a9c0f0dc216237147c74030fde4 540 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 456 2.7E-81 T 09-03-2017 IPR000914 Solute-binding protein family 5 domain BV404_RS05970 dbcc4a9c0f0dc216237147c74030fde4 540 Gene3D G3DSA:3.90.76.10 42 222 1.5E-41 T 09-03-2017 BV404_RS05970 dbcc4a9c0f0dc216237147c74030fde4 540 SUPERFAMILY SSF53850 34 535 1.21E-126 T 09-03-2017 BV404_RS05970 dbcc4a9c0f0dc216237147c74030fde4 540 Gene3D G3DSA:3.10.105.10 293 508 8.8E-54 T 09-03-2017 BV404_RS05970 dbcc4a9c0f0dc216237147c74030fde4 540 PIRSF PIRSF002741 1 540 5.3E-87 T 09-03-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 BV404_RS11390 7310577a3e0eacf8d5c1be4cd8856ebf 241 Pfam PF01048 Phosphorylase superfamily 15 222 1.4E-41 T 09-03-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 BV404_RS11390 7310577a3e0eacf8d5c1be4cd8856ebf 241 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.903 T 09-03-2017 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 BV404_RS11390 7310577a3e0eacf8d5c1be4cd8856ebf 241 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 09-03-2017 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 BV404_RS11390 7310577a3e0eacf8d5c1be4cd8856ebf 241 Gene3D G3DSA:3.40.50.1580 10 233 5.3E-85 T 09-03-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 BV404_RS11390 7310577a3e0eacf8d5c1be4cd8856ebf 241 SUPERFAMILY SSF53167 3 235 1.96E-94 T 09-03-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 BV404_RS11390 7310577a3e0eacf8d5c1be4cd8856ebf 241 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 5.7E-120 T 09-03-2017 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 BV404_RS14060 5556dc47dc517f22524a75b69368ab30 613 Pfam PF00920 Dehydratase family 34 604 3.8E-219 T 09-03-2017 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BV404_RS14060 5556dc47dc517f22524a75b69368ab30 613 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 09-03-2017 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BV404_RS14060 5556dc47dc517f22524a75b69368ab30 613 SUPERFAMILY SSF143975 3 420 1.23E-136 T 09-03-2017 BV404_RS14060 5556dc47dc517f22524a75b69368ab30 613 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 607 45.299 T 09-03-2017 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BV404_RS14060 5556dc47dc517f22524a75b69368ab30 613 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 607 7.7E-267 T 09-03-2017 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BV404_RS14060 5556dc47dc517f22524a75b69368ab30 613 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 09-03-2017 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BV404_RS14060 5556dc47dc517f22524a75b69368ab30 613 SUPERFAMILY SSF52016 421 608 1.33E-60 T 09-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel BV404_RS00580 6ea56aee7420e85eb1ecdc10b5cc1ffe 175 Pfam PF03737 Demethylmenaquinone methyltransferase 6 152 1.0E-38 T 09-03-2017 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein BV404_RS00580 6ea56aee7420e85eb1ecdc10b5cc1ffe 175 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 159 2.5E-82 T 09-03-2017 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 BV404_RS00580 6ea56aee7420e85eb1ecdc10b5cc1ffe 175 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 7.8E-68 T 09-03-2017 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 BV404_RS00580 6ea56aee7420e85eb1ecdc10b5cc1ffe 175 SUPERFAMILY SSF89562 2 158 1.07E-45 T 09-03-2017 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein BV404_RS00580 6ea56aee7420e85eb1ecdc10b5cc1ffe 175 Gene3D G3DSA:3.50.30.40 1 157 1.3E-47 T 09-03-2017 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein BV404_RS00580 6ea56aee7420e85eb1ecdc10b5cc1ffe 175 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 47.293 T 09-03-2017 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 BV404_RS14200 4e4dddf84a8bf2a21ff4d1dedfd46e01 293 Gene3D G3DSA:1.10.10.10 145 174 0.001 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS14200 4e4dddf84a8bf2a21ff4d1dedfd46e01 293 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 38 214 1.2E-56 T 09-03-2017 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 BV404_RS14200 4e4dddf84a8bf2a21ff4d1dedfd46e01 293 SUPERFAMILY SSF110849 41 132 5.49E-28 T 09-03-2017 IPR003115 ParB/Sulfiredoxin BV404_RS14200 4e4dddf84a8bf2a21ff4d1dedfd46e01 293 Gene3D G3DSA:3.90.1530.10 33 136 9.9E-40 T 09-03-2017 BV404_RS14200 4e4dddf84a8bf2a21ff4d1dedfd46e01 293 SMART SM00470 40 130 1.3E-34 T 09-03-2017 IPR003115 ParB/Sulfiredoxin BV404_RS14200 4e4dddf84a8bf2a21ff4d1dedfd46e01 293 SUPERFAMILY SSF109709 122 230 3.4E-33 T 09-03-2017 BV404_RS14200 4e4dddf84a8bf2a21ff4d1dedfd46e01 293 Pfam PF02195 ParB-like nuclease domain 43 130 2.3E-27 T 09-03-2017 IPR003115 ParB/Sulfiredoxin BV404_RS03370 ab59d7389769ead76d97d32e9d5a5584 282 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 5 280 44.582 T 09-03-2017 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 BV404_RS03370 ab59d7389769ead76d97d32e9d5a5584 282 Pfam PF13847 Methyltransferase domain 116 245 1.8E-16 T 09-03-2017 IPR025714 Methyltransferase domain BV404_RS03370 ab59d7389769ead76d97d32e9d5a5584 282 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 27 276 6.8E-90 T 09-03-2017 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 BV404_RS03370 ab59d7389769ead76d97d32e9d5a5584 282 Gene3D G3DSA:3.40.50.150 90 279 3.0E-65 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS03370 ab59d7389769ead76d97d32e9d5a5584 282 SUPERFAMILY SSF53335 5 280 1.1E-57 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS03370 ab59d7389769ead76d97d32e9d5a5584 282 Gene3D G3DSA:1.10.8.10 4 88 5.2E-29 T 09-03-2017 BV404_RS03370 ab59d7389769ead76d97d32e9d5a5584 282 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 185 191 - T 09-03-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BV404_RS03370 ab59d7389769ead76d97d32e9d5a5584 282 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 4 281 2.4E-76 T 09-03-2017 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 BV404_RS11340 3471f5a790d91c845722b238e04470cd 561 Gene3D G3DSA:2.30.38.10 378 434 3.1E-18 T 09-03-2017 BV404_RS11340 3471f5a790d91c845722b238e04470cd 561 Pfam PF00501 AMP-binding enzyme 24 440 1.2E-84 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 BV404_RS11340 3471f5a790d91c845722b238e04470cd 561 Gene3D G3DSA:3.40.50.980 19 188 2.1E-28 T 09-03-2017 BV404_RS11340 3471f5a790d91c845722b238e04470cd 561 Gene3D G3DSA:3.40.50.980 189 368 1.6E-25 T 09-03-2017 BV404_RS11340 3471f5a790d91c845722b238e04470cd 561 ProSitePatterns PS00455 Putative AMP-binding domain signature. 182 193 - T 09-03-2017 IPR020845 AMP-binding, conserved site BV404_RS11340 3471f5a790d91c845722b238e04470cd 561 SUPERFAMILY SSF56801 18 547 8.24E-110 T 09-03-2017 BV404_RS10915 5f2d3f7f7d86d6121123409c33870c60 373 SUPERFAMILY SSF102114 105 328 1.57E-12 T 09-03-2017 BV404_RS10915 5f2d3f7f7d86d6121123409c33870c60 373 Gene3D G3DSA:3.20.20.70 106 326 9.5E-15 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS10915 5f2d3f7f7d86d6121123409c33870c60 373 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 358 2.5E-160 T 09-03-2017 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 BV404_RS10915 5f2d3f7f7d86d6121123409c33870c60 373 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 5 353 72.02 T 09-03-2017 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 BV404_RS10915 5f2d3f7f7d86d6121123409c33870c60 373 PIRSF PIRSF006004 3 367 1.1E-143 T 09-03-2017 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 BV404_RS10915 5f2d3f7f7d86d6121123409c33870c60 373 Pfam PF04055 Radical SAM superfamily 109 280 3.2E-14 T 09-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 BV404_RS02440 180106541b7e85c955ab7d69546fbb3b 520 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 5 511 1.0E-135 T 09-03-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ BV404_RS02440 180106541b7e85c955ab7d69546fbb3b 520 PIRSF PIRSF002869 1 518 1.1E-150 T 09-03-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ BV404_RS02440 180106541b7e85c955ab7d69546fbb3b 520 Pfam PF03023 MviN-like protein 30 477 5.9E-140 T 09-03-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ BV404_RS02440 180106541b7e85c955ab7d69546fbb3b 520 PRINTS PR01806 Virulence factor MviN signature 54 70 2.0E-76 T 09-03-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ BV404_RS02440 180106541b7e85c955ab7d69546fbb3b 520 PRINTS PR01806 Virulence factor MviN signature 35 54 2.0E-76 T 09-03-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ BV404_RS02440 180106541b7e85c955ab7d69546fbb3b 520 PRINTS PR01806 Virulence factor MviN signature 142 166 2.0E-76 T 09-03-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ BV404_RS02440 180106541b7e85c955ab7d69546fbb3b 520 PRINTS PR01806 Virulence factor MviN signature 166 187 2.0E-76 T 09-03-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ BV404_RS02440 180106541b7e85c955ab7d69546fbb3b 520 PRINTS PR01806 Virulence factor MviN signature 268 294 2.0E-76 T 09-03-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ BV404_RS02440 180106541b7e85c955ab7d69546fbb3b 520 PRINTS PR01806 Virulence factor MviN signature 418 435 2.0E-76 T 09-03-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ BV404_RS02440 180106541b7e85c955ab7d69546fbb3b 520 PRINTS PR01806 Virulence factor MviN signature 366 385 2.0E-76 T 09-03-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ BV404_RS10900 f7ab83ec3537fcc399dd73f75a5c462d 422 Gene3D G3DSA:3.30.930.10 4 185 1.2E-99 T 09-03-2017 BV404_RS10900 f7ab83ec3537fcc399dd73f75a5c462d 422 Gene3D G3DSA:3.30.930.10 221 320 1.2E-99 T 09-03-2017 BV404_RS10900 f7ab83ec3537fcc399dd73f75a5c462d 422 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 410 8.2E-159 T 09-03-2017 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 BV404_RS10900 f7ab83ec3537fcc399dd73f75a5c462d 422 PIRSF PIRSF001549 2 422 3.8E-124 T 09-03-2017 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 BV404_RS10900 f7ab83ec3537fcc399dd73f75a5c462d 422 SUPERFAMILY SSF55681 5 321 2.99E-104 T 09-03-2017 BV404_RS10900 f7ab83ec3537fcc399dd73f75a5c462d 422 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 420 33.642 T 09-03-2017 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 BV404_RS10900 f7ab83ec3537fcc399dd73f75a5c462d 422 Pfam PF03129 Anticodon binding domain 340 419 4.0E-11 T 09-03-2017 IPR004154 Anticodon-binding BV404_RS10900 f7ab83ec3537fcc399dd73f75a5c462d 422 Pfam PF13393 Histidyl-tRNA synthetase 10 312 1.1E-44 T 09-03-2017 BV404_RS10900 f7ab83ec3537fcc399dd73f75a5c462d 422 SUPERFAMILY SSF52954 327 420 7.53E-26 T 09-03-2017 IPR004154 Anticodon-binding BV404_RS10900 f7ab83ec3537fcc399dd73f75a5c462d 422 Gene3D G3DSA:3.40.50.800 327 419 2.1E-31 T 09-03-2017 IPR004154 Anticodon-binding BV404_RS00675 209cc510de3e891c7973c03d1a4022d6 324 Gene3D G3DSA:3.30.930.10 13 320 4.9E-69 T 09-03-2017 BV404_RS00675 209cc510de3e891c7973c03d1a4022d6 324 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 15 319 1.5E-126 T 09-03-2017 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 BV404_RS00675 209cc510de3e891c7973c03d1a4022d6 324 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 1 324 53.119 T 09-03-2017 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 BV404_RS00675 209cc510de3e891c7973c03d1a4022d6 324 SUPERFAMILY SSF55681 11 322 1.57E-81 T 09-03-2017 BV404_RS00675 209cc510de3e891c7973c03d1a4022d6 324 Pfam PF00152 tRNA synthetases class II (D, K and N) 13 320 3.8E-42 T 09-03-2017 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BV404_RS04995 eadd77c7a1f97615988a6e721593d0b3 255 Gene3D G3DSA:3.30.70.20 121 160 4.9E-23 T 09-03-2017 BV404_RS04995 eadd77c7a1f97615988a6e721593d0b3 255 Gene3D G3DSA:3.30.70.20 161 247 7.9E-28 T 09-03-2017 BV404_RS04995 eadd77c7a1f97615988a6e721593d0b3 255 Pfam PF13247 4Fe-4S dicluster domain 101 196 2.4E-29 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BV404_RS04995 eadd77c7a1f97615988a6e721593d0b3 255 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 141 152 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BV404_RS04995 eadd77c7a1f97615988a6e721593d0b3 255 SUPERFAMILY SSF54862 47 231 1.26E-65 T 09-03-2017 BV404_RS04995 eadd77c7a1f97615988a6e721593d0b3 255 Gene3D G3DSA:3.30.70.20 52 120 1.5E-10 T 09-03-2017 BV404_RS19095 9b766f32f53f45ee43a7c5cb4b60431e 328 Gene3D G3DSA:3.20.20.60 16 205 1.4E-67 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 BV404_RS19095 9b766f32f53f45ee43a7c5cb4b60431e 328 Pfam PF02887 Pyruvate kinase, alpha/beta domain 237 326 8.3E-19 T 09-03-2017 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BV404_RS19095 9b766f32f53f45ee43a7c5cb4b60431e 328 SUPERFAMILY SSF50800 1 43 1.74E-9 T 09-03-2017 IPR011037 Pyruvate kinase-like, insert domain BV404_RS19095 9b766f32f53f45ee43a7c5cb4b60431e 328 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 1 326 4.6E-116 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BV404_RS19095 9b766f32f53f45ee43a7c5cb4b60431e 328 PRINTS PR01050 Pyruvate kinase family signature 64 78 2.8E-49 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BV404_RS19095 9b766f32f53f45ee43a7c5cb4b60431e 328 PRINTS PR01050 Pyruvate kinase family signature 193 209 2.8E-49 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BV404_RS19095 9b766f32f53f45ee43a7c5cb4b60431e 328 PRINTS PR01050 Pyruvate kinase family signature 124 148 2.8E-49 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BV404_RS19095 9b766f32f53f45ee43a7c5cb4b60431e 328 PRINTS PR01050 Pyruvate kinase family signature 97 123 2.8E-49 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BV404_RS19095 9b766f32f53f45ee43a7c5cb4b60431e 328 PRINTS PR01050 Pyruvate kinase family signature 149 173 2.8E-49 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BV404_RS19095 9b766f32f53f45ee43a7c5cb4b60431e 328 PRINTS PR01050 Pyruvate kinase family signature 174 192 2.8E-49 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BV404_RS19095 9b766f32f53f45ee43a7c5cb4b60431e 328 SUPERFAMILY SSF51621 34 221 1.99E-63 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 BV404_RS19095 9b766f32f53f45ee43a7c5cb4b60431e 328 Pfam PF00224 Pyruvate kinase, barrel domain 1 223 2.2E-87 T 09-03-2017 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BV404_RS19095 9b766f32f53f45ee43a7c5cb4b60431e 328 Gene3D G3DSA:3.40.1380.20 206 326 2.4E-31 T 09-03-2017 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BV404_RS19095 9b766f32f53f45ee43a7c5cb4b60431e 328 ProSitePatterns PS00110 Pyruvate kinase active site signature. 92 104 - T 09-03-2017 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BV404_RS19095 9b766f32f53f45ee43a7c5cb4b60431e 328 SUPERFAMILY SSF52935 203 325 1.68E-27 T 09-03-2017 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BV404_RS17975 7603c782a5ad893bcc837881730789ec 161 Gene3D G3DSA:3.40.50.620 119 160 2.0E-17 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS17975 7603c782a5ad893bcc837881730789ec 161 SUPERFAMILY SSF52374 1 160 1.73E-47 T 09-03-2017 BV404_RS17975 7603c782a5ad893bcc837881730789ec 161 PRINTS PR00987 Glutamyl-tRNA synthetase signature 117 127 1.2E-5 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 BV404_RS17975 7603c782a5ad893bcc837881730789ec 161 PRINTS PR00987 Glutamyl-tRNA synthetase signature 133 141 1.2E-5 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 BV404_RS17975 7603c782a5ad893bcc837881730789ec 161 Gene3D G3DSA:3.90.800.10 1 118 1.3E-35 T 09-03-2017 BV404_RS17975 7603c782a5ad893bcc837881730789ec 161 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 1 160 9.1E-53 T 09-03-2017 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 BV404_RS11800 fb675d1623c2042ed8e84d5b23d936bc 247 Gene3D G3DSA:1.10.1270.20 163 244 3.5E-35 T 09-03-2017 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 BV404_RS11800 fb675d1623c2042ed8e84d5b23d936bc 247 PIRSF PIRSF000386 1 247 1.4E-100 T 09-03-2017 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 BV404_RS11800 fb675d1623c2042ed8e84d5b23d936bc 247 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 1.3E-69 T 09-03-2017 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 BV404_RS11800 fb675d1623c2042ed8e84d5b23d936bc 247 Gene3D G3DSA:3.40.1280.10 1 160 1.7E-67 T 09-03-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BV404_RS11800 fb675d1623c2042ed8e84d5b23d936bc 247 SUPERFAMILY SSF75217 1 245 1.7E-101 T 09-03-2017 IPR029028 Alpha/beta knot methyltransferases BV404_RS11800 fb675d1623c2042ed8e84d5b23d936bc 247 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 247 117.149 T 09-03-2017 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 BV404_RS11800 fb675d1623c2042ed8e84d5b23d936bc 247 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 234 1.4E-107 T 09-03-2017 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 BV404_RS11030 05d08139a1cc140f2d93d0d8972ce213 203 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 194 7.2E-8 T 09-03-2017 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BV404_RS11030 05d08139a1cc140f2d93d0d8972ce213 203 Pfam PF00578 AhpC/TSA family 4 139 7.9E-34 T 09-03-2017 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BV404_RS11030 05d08139a1cc140f2d93d0d8972ce213 203 PIRSF PIRSF000239 1 202 4.5E-59 T 09-03-2017 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BV404_RS11030 05d08139a1cc140f2d93d0d8972ce213 203 SUPERFAMILY SSF52833 1 195 5.91E-67 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS11030 05d08139a1cc140f2d93d0d8972ce213 203 Gene3D G3DSA:3.40.30.10 3 194 1.7E-69 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS06835 46231f3bd684887ea809c03195901398 235 Gene3D G3DSA:3.20.20.190 2 233 2.0E-64 T 09-03-2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 BV404_RS06835 46231f3bd684887ea809c03195901398 235 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 8 231 1.4E-36 T 09-03-2017 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 BV404_RS06835 46231f3bd684887ea809c03195901398 235 SUPERFAMILY SSF51695 3 234 8.07E-65 T 09-03-2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 BV404_RS11255 530b85b0a9f62d71b6d20be7e8c1e105 381 TIGRFAM TIGR00937 2A51: chromate efflux transporter 8 375 8.0E-92 T 09-03-2017 IPR014047 Chromate transporter, long chain BV404_RS11255 530b85b0a9f62d71b6d20be7e8c1e105 381 Pfam PF02417 Chromate transporter 3 168 7.2E-35 T 09-03-2017 IPR003370 Chromate transporter GO:0015109|GO:0015703 BV404_RS11255 530b85b0a9f62d71b6d20be7e8c1e105 381 Pfam PF02417 Chromate transporter 213 375 4.3E-32 T 09-03-2017 IPR003370 Chromate transporter GO:0015109|GO:0015703 BV404_RS11255 530b85b0a9f62d71b6d20be7e8c1e105 381 PIRSF PIRSF004810 1 381 5.7E-112 T 09-03-2017 IPR014047 Chromate transporter, long chain BV404_RS07470 c264f5116ffb80a61f8ce7bedb3536be 158 Pfam PF13505 Outer membrane protein beta-barrel domain 6 157 3.6E-18 T 09-03-2017 IPR027385 Outer membrane protein beta-barrel BV404_RS07470 c264f5116ffb80a61f8ce7bedb3536be 158 SUPERFAMILY SSF56925 18 157 7.59E-22 T 09-03-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 BV404_RS07470 c264f5116ffb80a61f8ce7bedb3536be 158 Gene3D G3DSA:2.40.160.20 6 157 2.2E-20 T 09-03-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 BV404_RS01960 a5890c36790c193c1e4c06f2923098d2 256 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 2.3E-25 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BV404_RS01960 a5890c36790c193c1e4c06f2923098d2 256 SUPERFAMILY SSF46785 5 78 6.93E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS01960 a5890c36790c193c1e4c06f2923098d2 256 SMART SM00345 15 74 4.9E-28 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BV404_RS01960 a5890c36790c193c1e4c06f2923098d2 256 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 1.8E-9 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BV404_RS01960 a5890c36790c193c1e4c06f2923098d2 256 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 1.8E-9 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BV404_RS01960 a5890c36790c193c1e4c06f2923098d2 256 Gene3D G3DSA:1.20.120.530 98 238 3.9E-20 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal BV404_RS01960 a5890c36790c193c1e4c06f2923098d2 256 SUPERFAMILY SSF48008 97 235 2.54E-21 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal BV404_RS01960 a5890c36790c193c1e4c06f2923098d2 256 SMART SM00895 99 227 3.0E-20 T 09-03-2017 IPR011711 GntR, C-terminal BV404_RS01960 a5890c36790c193c1e4c06f2923098d2 256 Pfam PF07729 FCD domain 99 226 1.8E-19 T 09-03-2017 IPR011711 GntR, C-terminal BV404_RS01960 a5890c36790c193c1e4c06f2923098d2 256 Gene3D G3DSA:1.10.10.10 7 78 4.3E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS09465 8d2693a592dc383885d6a28f71fefc43 616 SUPERFAMILY SSF52096 52 178 3.98E-28 T 09-03-2017 IPR029045 ClpP/crotonase-like domain BV404_RS09465 8d2693a592dc383885d6a28f71fefc43 616 SUPERFAMILY SSF52096 209 284 3.98E-28 T 09-03-2017 IPR029045 ClpP/crotonase-like domain BV404_RS09465 8d2693a592dc383885d6a28f71fefc43 616 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 608 1.2E-193 T 09-03-2017 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 BV404_RS09465 8d2693a592dc383885d6a28f71fefc43 616 PIRSF PIRSF001217 8 616 3.0E-225 T 09-03-2017 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 BV404_RS09465 8d2693a592dc383885d6a28f71fefc43 616 Gene3D G3DSA:3.90.226.10 217 312 1.1E-60 T 09-03-2017 IPR029045 ClpP/crotonase-like domain BV404_RS09465 8d2693a592dc383885d6a28f71fefc43 616 Gene3D G3DSA:3.90.226.10 29 174 1.1E-60 T 09-03-2017 IPR029045 ClpP/crotonase-like domain BV404_RS09465 8d2693a592dc383885d6a28f71fefc43 616 Gene3D G3DSA:3.90.226.10 468 552 8.2E-67 T 09-03-2017 IPR029045 ClpP/crotonase-like domain BV404_RS09465 8d2693a592dc383885d6a28f71fefc43 616 Gene3D G3DSA:3.90.226.10 324 431 8.2E-67 T 09-03-2017 IPR029045 ClpP/crotonase-like domain BV404_RS09465 8d2693a592dc383885d6a28f71fefc43 616 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 327 540 3.5E-56 T 09-03-2017 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 BV404_RS09465 8d2693a592dc383885d6a28f71fefc43 616 SUPERFAMILY SSF52096 323 439 4.11E-42 T 09-03-2017 IPR029045 ClpP/crotonase-like domain BV404_RS09465 8d2693a592dc383885d6a28f71fefc43 616 SUPERFAMILY SSF52096 467 529 4.11E-42 T 09-03-2017 IPR029045 ClpP/crotonase-like domain BV404_RS09465 8d2693a592dc383885d6a28f71fefc43 616 Pfam PF01343 Peptidase family S49 391 541 3.0E-46 T 09-03-2017 IPR002142 Peptidase S49 GO:0006508|GO:0008233 BV404_RS09465 8d2693a592dc383885d6a28f71fefc43 616 Pfam PF01343 Peptidase family S49 138 293 4.9E-31 T 09-03-2017 IPR002142 Peptidase S49 GO:0006508|GO:0008233 BV404_RS12845 12f79b50091cd20fd5b65ddc9641adce 122 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 22.153 T 09-03-2017 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 BV404_RS12845 12f79b50091cd20fd5b65ddc9641adce 122 Pfam PF01250 Ribosomal protein S6 3 91 8.6E-29 T 09-03-2017 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS12845 12f79b50091cd20fd5b65ddc9641adce 122 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 09-03-2017 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 BV404_RS12845 12f79b50091cd20fd5b65ddc9641adce 122 Gene3D G3DSA:3.30.70.60 1 103 1.1E-42 T 09-03-2017 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 BV404_RS12845 12f79b50091cd20fd5b65ddc9641adce 122 SUPERFAMILY SSF54995 1 103 1.19E-38 T 09-03-2017 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS12845 12f79b50091cd20fd5b65ddc9641adce 122 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 6.9E-39 T 09-03-2017 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS07130 4dcd04c93afe263329320457c420fd7b 315 SUPERFAMILY SSF52402 4 159 7.7E-25 T 09-03-2017 BV404_RS07130 4dcd04c93afe263329320457c420fd7b 315 Gene3D G3DSA:3.40.50.620 142 300 6.4E-24 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS07130 4dcd04c93afe263329320457c420fd7b 315 Pfam PF00582 Universal stress protein family 179 301 3.3E-14 T 09-03-2017 IPR006016 UspA GO:0006950 BV404_RS07130 4dcd04c93afe263329320457c420fd7b 315 Pfam PF00582 Universal stress protein family 4 148 3.4E-13 T 09-03-2017 IPR006016 UspA GO:0006950 BV404_RS07130 4dcd04c93afe263329320457c420fd7b 315 SUPERFAMILY SSF52402 173 308 1.67E-23 T 09-03-2017 BV404_RS07130 4dcd04c93afe263329320457c420fd7b 315 Gene3D G3DSA:3.40.50.620 4 141 1.0E-19 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS01205 218502ef42a30989506d7ec646671f1a 207 SUPERFAMILY SSF52507 6 202 1.44E-56 T 09-03-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 BV404_RS01205 218502ef42a30989506d7ec646671f1a 207 Gene3D G3DSA:3.40.50.1950 7 205 8.3E-75 T 09-03-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 BV404_RS01205 218502ef42a30989506d7ec646671f1a 207 Pfam PF02441 Flavoprotein 7 144 1.4E-22 T 09-03-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 BV404_RS01205 218502ef42a30989506d7ec646671f1a 207 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 8 201 2.7E-56 T 09-03-2017 IPR004507 Flavin prenyltransferase UbiX/Pad1 BV404_RS01205 218502ef42a30989506d7ec646671f1a 207 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 6 203 34.562 T 09-03-2017 IPR004507 Flavin prenyltransferase UbiX/Pad1 BV404_RS08610 27d730e880f7fb35f81637f6bda2c0d0 216 Gene3D G3DSA:1.10.10.10 120 213 7.7E-32 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS08610 27d730e880f7fb35f81637f6bda2c0d0 216 SUPERFAMILY SSF46894 118 212 1.05E-29 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BV404_RS08610 27d730e880f7fb35f81637f6bda2c0d0 216 Pfam PF00486 Transcriptional regulatory protein, C terminal 140 211 4.2E-25 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BV404_RS08610 27d730e880f7fb35f81637f6bda2c0d0 216 Gene3D G3DSA:3.40.50.2300 1 115 9.2E-24 T 09-03-2017 BV404_RS08610 27d730e880f7fb35f81637f6bda2c0d0 216 Pfam PF00072 Response regulator receiver domain 5 110 6.2E-17 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS08610 27d730e880f7fb35f81637f6bda2c0d0 216 SUPERFAMILY SSF52172 2 169 2.13E-24 T 09-03-2017 IPR011006 CheY-like superfamily BV404_RS08610 27d730e880f7fb35f81637f6bda2c0d0 216 SMART SM00862 140 211 4.3E-27 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BV404_RS08610 27d730e880f7fb35f81637f6bda2c0d0 216 SMART SM00448 2 110 3.7E-23 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS03955 dd6e6cc4bc1003f44a568fbd8059e46f 222 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 8 218 1.1E-93 T 09-03-2017 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria BV404_RS03955 dd6e6cc4bc1003f44a568fbd8059e46f 222 PIRSF PIRSF002764 1 222 5.2E-84 T 09-03-2017 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria BV404_RS03955 dd6e6cc4bc1003f44a568fbd8059e46f 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 103 121 3.3E-70 T 09-03-2017 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 BV404_RS03955 dd6e6cc4bc1003f44a568fbd8059e46f 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 158 177 3.3E-70 T 09-03-2017 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 BV404_RS03955 dd6e6cc4bc1003f44a568fbd8059e46f 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 29 50 3.3E-70 T 09-03-2017 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 BV404_RS03955 dd6e6cc4bc1003f44a568fbd8059e46f 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 78 101 3.3E-70 T 09-03-2017 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 BV404_RS03955 dd6e6cc4bc1003f44a568fbd8059e46f 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 55 72 3.3E-70 T 09-03-2017 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 BV404_RS03955 dd6e6cc4bc1003f44a568fbd8059e46f 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 195 218 3.3E-70 T 09-03-2017 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 BV404_RS03955 dd6e6cc4bc1003f44a568fbd8059e46f 222 Pfam PF03379 CcmB protein 5 219 2.3E-91 T 09-03-2017 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 BV404_RS09955 9106653f81cf5f2d84e6cdb2d8cc67e9 183 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 156 3.6E-23 T 09-03-2017 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 BV404_RS09955 9106653f81cf5f2d84e6cdb2d8cc67e9 183 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 161 1.5E-29 T 09-03-2017 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 BV404_RS09955 9106653f81cf5f2d84e6cdb2d8cc67e9 183 ProSitePatterns PS01269 Uncharacterized protein family UPF0025 signature. 121 145 - T 09-03-2017 IPR020935 Phosphodiesterase YfcE, conserved site BV404_RS09955 9106653f81cf5f2d84e6cdb2d8cc67e9 183 SUPERFAMILY SSF56300 1 172 1.67E-35 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like BV404_RS09955 9106653f81cf5f2d84e6cdb2d8cc67e9 183 Gene3D G3DSA:3.60.21.10 1 161 1.0E-43 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like BV404_RS01150 fdc018f4a49c8565e9aeec6397d59e61 238 Gene3D G3DSA:3.40.50.300 11 217 1.8E-54 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS01150 fdc018f4a49c8565e9aeec6397d59e61 238 Pfam PF00005 ABC transporter 34 184 7.5E-27 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS01150 fdc018f4a49c8565e9aeec6397d59e61 238 SUPERFAMILY SSF52540 7 228 3.89E-50 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS01150 fdc018f4a49c8565e9aeec6397d59e61 238 SMART SM00382 39 232 7.1E-10 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS08165 04cb7c3ccb7200f6dae7a079b9ebecad 104 SMART SM01022 7 104 9.3E-24 T 09-03-2017 IPR007374 ASCH domain BV404_RS08165 04cb7c3ccb7200f6dae7a079b9ebecad 104 Gene3D G3DSA:2.30.130.30 3 104 2.7E-44 T 09-03-2017 BV404_RS08165 04cb7c3ccb7200f6dae7a079b9ebecad 104 SUPERFAMILY SSF88697 4 104 8.45E-33 T 09-03-2017 IPR015947 PUA-like domain BV404_RS08165 04cb7c3ccb7200f6dae7a079b9ebecad 104 Pfam PF04266 ASCH domain 7 93 3.1E-15 T 09-03-2017 IPR007374 ASCH domain BV404_RS08165 04cb7c3ccb7200f6dae7a079b9ebecad 104 Hamap MF_00684 UPF0267 protein YqfB [yqfB]. 3 104 30.532 T 09-03-2017 IPR008314 Uncharacterised conserved protein UCP029143 BV404_RS08165 04cb7c3ccb7200f6dae7a079b9ebecad 104 PIRSF PIRSF029143 2 104 1.5E-45 T 09-03-2017 IPR008314 Uncharacterised conserved protein UCP029143 BV404_RS12330 88b2800790d56852dd0a5b44dcad34b8 306 Hamap MF_00313 Glutaminase [glsA]. 4 306 46.904 T 09-03-2017 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 BV404_RS12330 88b2800790d56852dd0a5b44dcad34b8 306 Gene3D G3DSA:3.40.710.10 2 306 8.0E-124 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like BV404_RS12330 88b2800790d56852dd0a5b44dcad34b8 306 Pfam PF04960 Glutaminase 22 306 3.1E-112 T 09-03-2017 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 BV404_RS12330 88b2800790d56852dd0a5b44dcad34b8 306 TIGRFAM TIGR03814 Gln_ase: glutaminase A 8 306 3.2E-130 T 09-03-2017 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 BV404_RS12330 88b2800790d56852dd0a5b44dcad34b8 306 SUPERFAMILY SSF56601 3 306 3.62E-113 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like BV404_RS05840 6e6d06314bcb4c45de4f9d2f5d888ec7 245 Gene3D G3DSA:2.40.70.10 105 235 2.3E-48 T 09-03-2017 IPR021109 Aspartic peptidase domain BV404_RS05840 6e6d06314bcb4c45de4f9d2f5d888ec7 245 Pfam PF05618 Putative ATP-dependant zinc protease 107 243 9.1E-48 T 09-03-2017 BV404_RS05840 6e6d06314bcb4c45de4f9d2f5d888ec7 245 SUPERFAMILY SSF50630 107 241 5.06E-41 T 09-03-2017 IPR021109 Aspartic peptidase domain BV404_RS13060 bd05e0dc7c03b9e203237b883f3788f1 355 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 348 1.2E-139 T 09-03-2017 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BV404_RS13060 bd05e0dc7c03b9e203237b883f3788f1 355 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 350 50.423 T 09-03-2017 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BV404_RS13060 bd05e0dc7c03b9e203237b883f3788f1 355 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 09-03-2017 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BV404_RS13060 bd05e0dc7c03b9e203237b883f3788f1 355 Gene3D G3DSA:3.20.20.210 2 353 4.1E-155 T 09-03-2017 BV404_RS13060 bd05e0dc7c03b9e203237b883f3788f1 355 SUPERFAMILY SSF51726 1 354 2.09E-121 T 09-03-2017 BV404_RS13060 bd05e0dc7c03b9e203237b883f3788f1 355 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 09-03-2017 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BV404_RS13060 bd05e0dc7c03b9e203237b883f3788f1 355 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 348 4.0E-141 T 09-03-2017 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BV404_RS09990 b81fb5b9ba3566959e2afc4f6022e23c 284 Gene3D G3DSA:1.25.40.10 197 284 1.0E-28 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BV404_RS09990 b81fb5b9ba3566959e2afc4f6022e23c 284 Gene3D G3DSA:3.40.30.10 4 109 1.1E-21 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS09990 b81fb5b9ba3566959e2afc4f6022e23c 284 Pfam PF14559 Tetratricopeptide repeat 124 190 3.0E-11 T 09-03-2017 BV404_RS09990 b81fb5b9ba3566959e2afc4f6022e23c 284 Pfam PF14561 Tetratricopeptide repeat 195 284 5.3E-25 T 09-03-2017 BV404_RS09990 b81fb5b9ba3566959e2afc4f6022e23c 284 Gene3D G3DSA:1.25.40.10 110 196 2.3E-27 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BV404_RS09990 b81fb5b9ba3566959e2afc4f6022e23c 284 SUPERFAMILY SSF52833 3 113 1.41E-25 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS09990 b81fb5b9ba3566959e2afc4f6022e23c 284 Pfam PF00085 Thioredoxin 7 109 3.7E-15 T 09-03-2017 IPR013766 Thioredoxin domain GO:0045454 BV404_RS04915 3c3d5b8b332db4210a0ed1e6675b7147 1047 Pfam PF00873 AcrB/AcrD/AcrF family 5 1032 6.3E-240 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS04915 3c3d5b8b332db4210a0ed1e6675b7147 1047 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 2.1E-32 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS04915 3c3d5b8b332db4210a0ed1e6675b7147 1047 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 2.1E-32 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS04915 3c3d5b8b332db4210a0ed1e6675b7147 1047 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 2.1E-32 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS04915 3c3d5b8b332db4210a0ed1e6675b7147 1047 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 2.1E-32 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS04915 3c3d5b8b332db4210a0ed1e6675b7147 1047 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 2.1E-32 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS04915 3c3d5b8b332db4210a0ed1e6675b7147 1047 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 2.1E-32 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS04915 3c3d5b8b332db4210a0ed1e6675b7147 1047 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 2.1E-32 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS04915 3c3d5b8b332db4210a0ed1e6675b7147 1047 SUPERFAMILY SSF82714 185 269 1.57E-17 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BV404_RS04915 3c3d5b8b332db4210a0ed1e6675b7147 1047 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1043 0.0 T 09-03-2017 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 BV404_RS04915 3c3d5b8b332db4210a0ed1e6675b7147 1047 Gene3D G3DSA:1.10.3850.10 278 500 7.0E-68 T 09-03-2017 BV404_RS04915 3c3d5b8b332db4210a0ed1e6675b7147 1047 Gene3D G3DSA:1.10.3850.10 806 1035 2.4E-52 T 09-03-2017 BV404_RS04915 3c3d5b8b332db4210a0ed1e6675b7147 1047 SUPERFAMILY SSF82714 716 800 5.1E-18 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BV404_RS04915 3c3d5b8b332db4210a0ed1e6675b7147 1047 SUPERFAMILY SSF82866 294 498 2.75E-43 T 09-03-2017 BV404_RS04915 3c3d5b8b332db4210a0ed1e6675b7147 1047 SUPERFAMILY SSF82693 271 328 4.45E-22 T 09-03-2017 BV404_RS04915 3c3d5b8b332db4210a0ed1e6675b7147 1047 SUPERFAMILY SSF82693 137 184 4.45E-22 T 09-03-2017 BV404_RS04915 3c3d5b8b332db4210a0ed1e6675b7147 1047 SUPERFAMILY SSF82866 799 1037 1.06E-50 T 09-03-2017 BV404_RS04915 3c3d5b8b332db4210a0ed1e6675b7147 1047 Gene3D G3DSA:3.30.2090.10 717 800 2.0E-19 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BV404_RS04915 3c3d5b8b332db4210a0ed1e6675b7147 1047 Gene3D G3DSA:3.30.2090.10 185 269 6.2E-19 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BV404_RS04915 3c3d5b8b332db4210a0ed1e6675b7147 1047 SUPERFAMILY SSF82693 46 127 2.38E-19 T 09-03-2017 BV404_RS04915 3c3d5b8b332db4210a0ed1e6675b7147 1047 Gene3D G3DSA:3.30.70.1430 46 142 6.8E-24 T 09-03-2017 BV404_RS10045 d77c3b97b2f312beb62f22e85f2d703b 85 SUPERFAMILY SSF55594 1 82 4.06E-26 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like BV404_RS10045 d77c3b97b2f312beb62f22e85f2d703b 85 Gene3D G3DSA:3.30.1340.10 1 83 2.0E-31 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like BV404_RS10045 d77c3b97b2f312beb62f22e85f2d703b 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 8.0E-26 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like BV404_RS10045 d77c3b97b2f312beb62f22e85f2d703b 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.9E-18 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like BV404_RS10045 d77c3b97b2f312beb62f22e85f2d703b 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.9E-18 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like BV404_RS10045 d77c3b97b2f312beb62f22e85f2d703b 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.9E-18 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like BV404_RS10045 d77c3b97b2f312beb62f22e85f2d703b 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 09-03-2017 IPR002114 Phosphotransferase system, HPr serine phosphorylation site BV404_RS10045 d77c3b97b2f312beb62f22e85f2d703b 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 8.5E-28 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like BV404_RS10045 d77c3b97b2f312beb62f22e85f2d703b 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 09-03-2017 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site BV404_RS06770 f6baa0c1590a743e2c3e50fdccee88cd 505 SUPERFAMILY SSF103473 13 202 8.63E-73 T 09-03-2017 IPR020846 Major facilitator superfamily domain BV404_RS06770 f6baa0c1590a743e2c3e50fdccee88cd 505 SUPERFAMILY SSF103473 254 425 8.63E-73 T 09-03-2017 IPR020846 Major facilitator superfamily domain BV404_RS06770 f6baa0c1590a743e2c3e50fdccee88cd 505 SUPERFAMILY SSF103473 476 503 8.63E-73 T 09-03-2017 IPR020846 Major facilitator superfamily domain BV404_RS06770 f6baa0c1590a743e2c3e50fdccee88cd 505 Pfam PF07690 Major Facilitator Superfamily 23 415 3.3E-54 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BV404_RS06770 f6baa0c1590a743e2c3e50fdccee88cd 505 Gene3D G3DSA:1.20.1250.20 265 426 9.6E-18 T 09-03-2017 BV404_RS06770 f6baa0c1590a743e2c3e50fdccee88cd 505 Gene3D G3DSA:1.20.1250.20 477 501 9.6E-18 T 09-03-2017 BV404_RS06770 f6baa0c1590a743e2c3e50fdccee88cd 505 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 19 493 4.3E-131 T 09-03-2017 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 BV404_RS06770 f6baa0c1590a743e2c3e50fdccee88cd 505 Gene3D G3DSA:1.20.1250.20 22 197 4.2E-33 T 09-03-2017 BV404_RS06770 f6baa0c1590a743e2c3e50fdccee88cd 505 PRINTS PR01036 Tetracycline resistance protein TetB signature 143 167 2.7E-5 T 09-03-2017 BV404_RS06770 f6baa0c1590a743e2c3e50fdccee88cd 505 PRINTS PR01036 Tetracycline resistance protein TetB signature 113 133 2.7E-5 T 09-03-2017 BV404_RS06770 f6baa0c1590a743e2c3e50fdccee88cd 505 PRINTS PR01036 Tetracycline resistance protein TetB signature 268 293 2.7E-5 T 09-03-2017 BV404_RS06770 f6baa0c1590a743e2c3e50fdccee88cd 505 PRINTS PR01036 Tetracycline resistance protein TetB signature 22 46 2.7E-5 T 09-03-2017 BV404_RS11930 0c1a49720c887fb8ba7040edc07c4325 152 Gene3D G3DSA:1.10.10.10 10 55 3.6E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS11930 0c1a49720c887fb8ba7040edc07c4325 152 Gene3D G3DSA:1.10.10.10 102 150 3.9E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS11930 0c1a49720c887fb8ba7040edc07c4325 152 Pfam PF02631 RecX family 35 149 6.5E-32 T 09-03-2017 IPR003783 Regulatory protein RecX GO:0006282 BV404_RS11930 0c1a49720c887fb8ba7040edc07c4325 152 Gene3D G3DSA:1.10.10.10 56 99 2.0E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS11930 0c1a49720c887fb8ba7040edc07c4325 152 Hamap MF_01114 Regulatory protein RecX [recX]. 5 152 14.316 T 09-03-2017 IPR003783 Regulatory protein RecX GO:0006282 BV404_RS13020 44a1371835f0cf458e309ff07ec99c72 285 Pfam PF02666 Phosphatidylserine decarboxylase 62 265 9.9E-60 T 09-03-2017 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 BV404_RS13020 44a1371835f0cf458e309ff07ec99c72 285 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 48 283 9.0E-87 T 09-03-2017 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 BV404_RS13020 44a1371835f0cf458e309ff07ec99c72 285 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 9 285 48.783 T 09-03-2017 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 BV404_RS01190 26ebaf6a54cfb7f85c39333ed6397f79 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 09-03-2017 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 BV404_RS01190 26ebaf6a54cfb7f85c39333ed6397f79 176 Pfam PF00719 Inorganic pyrophosphatase 18 173 9.3E-52 T 09-03-2017 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 BV404_RS01190 26ebaf6a54cfb7f85c39333ed6397f79 176 SUPERFAMILY SSF50324 3 174 1.27E-65 T 09-03-2017 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 BV404_RS01190 26ebaf6a54cfb7f85c39333ed6397f79 176 Gene3D G3DSA:3.90.80.10 4 175 4.4E-59 T 09-03-2017 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 BV404_RS01190 26ebaf6a54cfb7f85c39333ed6397f79 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.281 T 09-03-2017 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 BV404_RS08160 1766430f53e1e03e8a1ddf09eedb0b65 106 Hamap MF_00680 UPF0263 protein YciU [yciU]. 1 106 35.219 T 09-03-2017 IPR007376 dsDNA mimic, putative BV404_RS08160 1766430f53e1e03e8a1ddf09eedb0b65 106 Pfam PF04269 Protein of unknown function, DUF440 5 105 5.1E-44 T 09-03-2017 IPR007376 dsDNA mimic, putative BV404_RS08160 1766430f53e1e03e8a1ddf09eedb0b65 106 PIRSF PIRSF004916 1 105 3.4E-51 T 09-03-2017 IPR007376 dsDNA mimic, putative BV404_RS08160 1766430f53e1e03e8a1ddf09eedb0b65 106 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 8 104 2.0E-45 T 09-03-2017 IPR007376 dsDNA mimic, putative BV404_RS08160 1766430f53e1e03e8a1ddf09eedb0b65 106 Gene3D G3DSA:3.10.450.140 6 105 3.4E-44 T 09-03-2017 IPR007376 dsDNA mimic, putative BV404_RS08160 1766430f53e1e03e8a1ddf09eedb0b65 106 SUPERFAMILY SSF102816 3 105 1.96E-46 T 09-03-2017 IPR007376 dsDNA mimic, putative BV404_RS06180 a143317af9de300d24bf688447ba70e3 287 SUPERFAMILY SSF53850 83 272 7.42E-29 T 09-03-2017 BV404_RS06180 a143317af9de300d24bf688447ba70e3 287 Gene3D G3DSA:1.10.10.10 1 80 5.0E-28 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS06180 a143317af9de300d24bf688447ba70e3 287 Gene3D G3DSA:3.40.190.10 98 156 3.7E-9 T 09-03-2017 BV404_RS06180 a143317af9de300d24bf688447ba70e3 287 Gene3D G3DSA:3.40.190.10 262 273 3.7E-9 T 09-03-2017 BV404_RS06180 a143317af9de300d24bf688447ba70e3 287 Pfam PF03466 LysR substrate binding domain 103 275 6.2E-16 T 09-03-2017 IPR005119 LysR, substrate-binding BV404_RS06180 a143317af9de300d24bf688447ba70e3 287 Gene3D G3DSA:3.40.190.10 157 244 1.5E-14 T 09-03-2017 BV404_RS06180 a143317af9de300d24bf688447ba70e3 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 6.4E-21 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS06180 a143317af9de300d24bf688447ba70e3 287 SUPERFAMILY SSF46785 1 81 6.55E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS06180 a143317af9de300d24bf688447ba70e3 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.6E-10 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS06180 a143317af9de300d24bf688447ba70e3 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.6E-10 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS06180 a143317af9de300d24bf688447ba70e3 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.6E-10 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS07675 93a63fa6b611c1e4de28156a18d33397 179 Gene3D G3DSA:2.60.30.10 43 178 2.6E-56 T 09-03-2017 IPR013504 Methylamine/Aralkylamine dehydrogenase light chain, C-terminal domain GO:0009308|GO:0016638|GO:0042597|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967 BV404_RS07675 93a63fa6b611c1e4de28156a18d33397 179 SUPERFAMILY SSF57561 62 177 2.22E-48 T 09-03-2017 IPR013504 Methylamine/Aralkylamine dehydrogenase light chain, C-terminal domain GO:0009308|GO:0016638|GO:0042597|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967 BV404_RS07675 93a63fa6b611c1e4de28156a18d33397 179 PIRSF PIRSF000192 7 178 1.0E-46 T 09-03-2017 IPR016008 Amine dehydrogenase light chain GO:0009308|GO:0030058|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967 BV404_RS07675 93a63fa6b611c1e4de28156a18d33397 179 Pfam PF02975 Methylamine dehydrogenase, L chain 66 175 4.3E-49 T 09-03-2017 IPR013504 Methylamine/Aralkylamine dehydrogenase light chain, C-terminal domain GO:0009308|GO:0016638|GO:0042597|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967 BV404_RS09175 186c43731f22d0c2b799bbce181eb76d 619 SUPERFAMILY SSF109998 203 245 2.75E-40 T 09-03-2017 IPR027304 Trigger factor/SurA domain BV404_RS09175 186c43731f22d0c2b799bbce181eb76d 619 SUPERFAMILY SSF109998 39 169 2.75E-40 T 09-03-2017 IPR027304 Trigger factor/SurA domain BV404_RS09175 186c43731f22d0c2b799bbce181eb76d 619 Gene3D G3DSA:3.10.50.40 263 385 2.4E-39 T 09-03-2017 BV404_RS09175 186c43731f22d0c2b799bbce181eb76d 619 SUPERFAMILY SSF54534 225 361 1.05E-29 T 09-03-2017 BV404_RS09175 186c43731f22d0c2b799bbce181eb76d 619 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 299 320 - T 09-03-2017 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-936440 BV404_RS09175 186c43731f22d0c2b799bbce181eb76d 619 Pfam PF13624 SurA N-terminal domain 1 166 6.0E-51 T 09-03-2017 BV404_RS09175 186c43731f22d0c2b799bbce181eb76d 619 Pfam PF13616 PPIC-type PPIASE domain 262 362 8.4E-26 T 09-03-2017 BV404_RS13975 045a89fc377de7ce6d11fbe64a064114 191 Gene3D G3DSA:3.90.45.10 26 189 1.5E-63 T 09-03-2017 IPR023635 Peptide deformylase BV404_RS13975 045a89fc377de7ce6d11fbe64a064114 191 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 25 181 6.6E-60 T 09-03-2017 IPR023635 Peptide deformylase BV404_RS13975 045a89fc377de7ce6d11fbe64a064114 191 Hamap MF_00163 Peptide deformylase [def]. 23 183 30.961 T 09-03-2017 IPR023635 Peptide deformylase BV404_RS13975 045a89fc377de7ce6d11fbe64a064114 191 PIRSF PIRSF004749 7 191 1.1E-56 T 09-03-2017 IPR023635 Peptide deformylase BV404_RS13975 045a89fc377de7ce6d11fbe64a064114 191 SUPERFAMILY SSF56420 24 186 5.1E-62 T 09-03-2017 IPR023635 Peptide deformylase BV404_RS13975 045a89fc377de7ce6d11fbe64a064114 191 PRINTS PR01576 Peptide deformylase signature 122 140 2.5E-37 T 09-03-2017 IPR023635 Peptide deformylase BV404_RS13975 045a89fc377de7ce6d11fbe64a064114 191 PRINTS PR01576 Peptide deformylase signature 110 121 2.5E-37 T 09-03-2017 IPR023635 Peptide deformylase BV404_RS13975 045a89fc377de7ce6d11fbe64a064114 191 PRINTS PR01576 Peptide deformylase signature 54 83 2.5E-37 T 09-03-2017 IPR023635 Peptide deformylase BV404_RS13975 045a89fc377de7ce6d11fbe64a064114 191 PRINTS PR01576 Peptide deformylase signature 141 170 2.5E-37 T 09-03-2017 IPR023635 Peptide deformylase BV404_RS13975 045a89fc377de7ce6d11fbe64a064114 191 Pfam PF01327 Polypeptide deformylase 25 173 6.7E-50 T 09-03-2017 IPR023635 Peptide deformylase BV404_RS06760 50d4851b41428cb1aea5eede0e968273 139 Gene3D G3DSA:1.10.10.10 5 138 6.3E-34 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS06760 50d4851b41428cb1aea5eede0e968273 139 SMART SM00347 23 123 1.0E-12 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BV404_RS06760 50d4851b41428cb1aea5eede0e968273 139 Pfam PF01047 MarR family 30 87 7.3E-14 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BV404_RS06760 50d4851b41428cb1aea5eede0e968273 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 133 1.5E-10 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BV404_RS06760 50d4851b41428cb1aea5eede0e968273 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 47 63 1.5E-10 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BV404_RS06760 50d4851b41428cb1aea5eede0e968273 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 99 1.5E-10 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BV404_RS06760 50d4851b41428cb1aea5eede0e968273 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 79 1.5E-10 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BV404_RS06760 50d4851b41428cb1aea5eede0e968273 139 SUPERFAMILY SSF46785 5 138 3.18E-29 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS04030 74671e1f4dc348ae74bc04b5e295c4fa 417 Gene3D G3DSA:3.40.50.720 5 124 7.1E-9 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS04030 74671e1f4dc348ae74bc04b5e295c4fa 417 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 6.4E-25 T 09-03-2017 BV404_RS04030 74671e1f4dc348ae74bc04b5e295c4fa 417 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 6.4E-25 T 09-03-2017 BV404_RS04030 74671e1f4dc348ae74bc04b5e295c4fa 417 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 6.4E-25 T 09-03-2017 BV404_RS04030 74671e1f4dc348ae74bc04b5e295c4fa 417 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 6.4E-25 T 09-03-2017 BV404_RS04030 74671e1f4dc348ae74bc04b5e295c4fa 417 SUPERFAMILY SSF51905 5 175 1.3E-52 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS04030 74671e1f4dc348ae74bc04b5e295c4fa 417 SUPERFAMILY SSF51905 277 371 1.3E-52 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS04030 74671e1f4dc348ae74bc04b5e295c4fa 417 Pfam PF01494 FAD binding domain 5 346 5.7E-78 T 09-03-2017 IPR002938 FAD-binding domain GO:0071949 BV404_RS04030 74671e1f4dc348ae74bc04b5e295c4fa 417 Gene3D G3DSA:3.30.9.10 142 302 1.1E-67 T 09-03-2017 BV404_RS04030 74671e1f4dc348ae74bc04b5e295c4fa 417 SUPERFAMILY SSF54373 178 278 1.49E-44 T 09-03-2017 BV404_RS04030 74671e1f4dc348ae74bc04b5e295c4fa 417 TIGRFAM TIGR02360 pbenz_hydroxyl: 4-hydroxybenzoate 3-monooxygenase 4 397 4.5E-184 T 09-03-2017 IPR012733 4-hydroxybenzoate 3-monooxygenase GO:0018659|GO:0043639|GO:0050660|GO:0055114 BV404_RS00795 3733f70bcff445c71f6da7c96a6253dc 276 Gene3D G3DSA:1.10.1020.10 60 156 1.4E-33 T 09-03-2017 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 BV404_RS00795 3733f70bcff445c71f6da7c96a6253dc 276 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 1.8E-17 T 09-03-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 BV404_RS00795 3733f70bcff445c71f6da7c96a6253dc 276 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 1.8E-17 T 09-03-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 BV404_RS00795 3733f70bcff445c71f6da7c96a6253dc 276 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 1.8E-17 T 09-03-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 BV404_RS00795 3733f70bcff445c71f6da7c96a6253dc 276 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 1.8E-17 T 09-03-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 BV404_RS00795 3733f70bcff445c71f6da7c96a6253dc 276 SUPERFAMILY SSF53335 5 268 6.23E-73 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS00795 3733f70bcff445c71f6da7c96a6253dc 276 Gene3D G3DSA:3.40.50.150 160 267 1.5E-50 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS00795 3733f70bcff445c71f6da7c96a6253dc 276 Gene3D G3DSA:3.40.50.150 1 59 1.5E-50 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS00795 3733f70bcff445c71f6da7c96a6253dc 276 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 252 1.1E-68 T 09-03-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 BV404_RS00795 3733f70bcff445c71f6da7c96a6253dc 276 PIRSF PIRSF000398 1 275 2.1E-71 T 09-03-2017 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 BV404_RS00795 3733f70bcff445c71f6da7c96a6253dc 276 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 09-03-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BV404_RS00795 3733f70bcff445c71f6da7c96a6253dc 276 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 268 5.8E-94 T 09-03-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 BV404_RS04555 869c8f59f382291d89a1e5d909bc940e 170 Pfam PF10135 Rod binding protein 54 104 2.7E-13 T 09-03-2017 IPR019301 Flagellar protein FlgJ, N-terminal BV404_RS01130 6eb8b432af7279bc874600c53a211686 206 SUPERFAMILY SSF52540 26 201 2.83E-38 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS01130 6eb8b432af7279bc874600c53a211686 206 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 30 202 38.164 T 09-03-2017 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 BV404_RS01130 6eb8b432af7279bc874600c53a211686 206 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 14 195 3.2E-81 T 09-03-2017 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 BV404_RS01130 6eb8b432af7279bc874600c53a211686 206 Gene3D G3DSA:3.40.50.300 9 205 1.3E-89 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS01130 6eb8b432af7279bc874600c53a211686 206 Pfam PF01583 Adenylylsulphate kinase 31 181 1.1E-71 T 09-03-2017 BV404_RS02175 45e144951ac9d0ce7eb53b10f65a28d4 430 Pfam PF01551 Peptidase family M23 295 389 1.5E-30 T 09-03-2017 IPR016047 Peptidase M23 BV404_RS02175 45e144951ac9d0ce7eb53b10f65a28d4 430 SUPERFAMILY SSF51261 146 390 1.67E-70 T 09-03-2017 IPR011055 Duplicated hybrid motif BV404_RS02175 45e144951ac9d0ce7eb53b10f65a28d4 430 Gene3D G3DSA:2.70.70.10 250 391 5.0E-44 T 09-03-2017 BV404_RS02175 45e144951ac9d0ce7eb53b10f65a28d4 430 Pfam PF08525 Opacity-associated protein A N-terminal motif 4 31 1.8E-5 T 09-03-2017 IPR013731 Opacity-associated protein A, N-terminal BV404_RS06555 08ef24ff7bc8bd6029b3bc0f40350735 652 Pfam PF00005 ABC transporter 25 173 3.0E-30 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS06555 08ef24ff7bc8bd6029b3bc0f40350735 652 Gene3D G3DSA:3.40.50.300 4 224 3.8E-69 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS06555 08ef24ff7bc8bd6029b3bc0f40350735 652 SUPERFAMILY SSF52540 5 226 3.33E-71 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS06555 08ef24ff7bc8bd6029b3bc0f40350735 652 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS06555 08ef24ff7bc8bd6029b3bc0f40350735 652 Pfam PF02687 FtsX-like permease family 532 645 2.8E-20 T 09-03-2017 IPR003838 ABC transporter permease protein domain GO:0016020 BV404_RS06555 08ef24ff7bc8bd6029b3bc0f40350735 652 Pfam PF12704 MacB-like periplasmic core domain 277 494 5.4E-40 T 09-03-2017 IPR025857 MacB-like periplasmic core domain BV404_RS06555 08ef24ff7bc8bd6029b3bc0f40350735 652 SMART SM00382 34 221 8.8E-18 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS12560 7e132b5a07a6a78797a1024a536e3125 347 Gene3D G3DSA:3.30.420.40 267 321 1.6E-35 T 09-03-2017 BV404_RS12560 7e132b5a07a6a78797a1024a536e3125 347 Gene3D G3DSA:3.30.420.40 164 190 1.6E-35 T 09-03-2017 BV404_RS12560 7e132b5a07a6a78797a1024a536e3125 347 Gene3D G3DSA:3.90.640.10 191 263 3.1E-31 T 09-03-2017 BV404_RS12560 7e132b5a07a6a78797a1024a536e3125 347 SUPERFAMILY SSF53067 9 152 1.73E-37 T 09-03-2017 BV404_RS12560 7e132b5a07a6a78797a1024a536e3125 347 SUPERFAMILY SSF53067 154 340 3.17E-51 T 09-03-2017 BV404_RS12560 7e132b5a07a6a78797a1024a536e3125 347 Gene3D G3DSA:3.30.420.40 9 163 2.7E-46 T 09-03-2017 BV404_RS12560 7e132b5a07a6a78797a1024a536e3125 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 1.6E-63 T 09-03-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 BV404_RS12560 7e132b5a07a6a78797a1024a536e3125 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 1.6E-63 T 09-03-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 BV404_RS12560 7e132b5a07a6a78797a1024a536e3125 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 1.6E-63 T 09-03-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 BV404_RS12560 7e132b5a07a6a78797a1024a536e3125 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 1.6E-63 T 09-03-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 BV404_RS12560 7e132b5a07a6a78797a1024a536e3125 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 1.6E-63 T 09-03-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 BV404_RS12560 7e132b5a07a6a78797a1024a536e3125 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 5.4E-164 T 09-03-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 BV404_RS12560 7e132b5a07a6a78797a1024a536e3125 347 Pfam PF06723 MreB/Mbl protein 11 338 1.7E-148 T 09-03-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 BV404_RS12515 a6b52d8ab26140980aa8d9dc184253b0 268 Gene3D G3DSA:2.60.120.260 65 124 2.4E-6 T 09-03-2017 IPR008979 Galactose-binding domain-like BV404_RS12515 a6b52d8ab26140980aa8d9dc184253b0 268 SUPERFAMILY SSF49785 2 157 3.91E-20 T 09-03-2017 IPR008979 Galactose-binding domain-like BV404_RS02330 8bb8cf3ce2c3ced444494b2e71789668 148 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 12 143 1.7E-37 T 09-03-2017 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 BV404_RS02330 8bb8cf3ce2c3ced444494b2e71789668 148 Gene3D G3DSA:3.40.630.30 1 144 1.0E-31 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS02330 8bb8cf3ce2c3ced444494b2e71789668 148 SUPERFAMILY SSF55729 1 145 5.06E-31 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS02330 8bb8cf3ce2c3ced444494b2e71789668 148 Pfam PF00583 Acetyltransferase (GNAT) family 48 121 1.5E-14 T 09-03-2017 IPR000182 GNAT domain GO:0008080 BV404_RS03670 4f7382d3a39f54dcecf5eb3f47a8c177 244 Gene3D G3DSA:3.40.50.720 1 243 2.2E-62 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS03670 4f7382d3a39f54dcecf5eb3f47a8c177 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 169 0.0033 T 09-03-2017 BV404_RS03670 4f7382d3a39f54dcecf5eb3f47a8c177 244 SUPERFAMILY SSF51735 1 243 6.22E-61 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS03670 4f7382d3a39f54dcecf5eb3f47a8c177 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 5.5E-27 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS03670 4f7382d3a39f54dcecf5eb3f47a8c177 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 5.5E-27 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS03670 4f7382d3a39f54dcecf5eb3f47a8c177 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 5.5E-27 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS03670 4f7382d3a39f54dcecf5eb3f47a8c177 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 5.5E-27 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS03670 4f7382d3a39f54dcecf5eb3f47a8c177 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 5.5E-27 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS03670 4f7382d3a39f54dcecf5eb3f47a8c177 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 243 5.0E-46 T 09-03-2017 BV404_RS09660 a59fa63933ee635586d2896293e2e956 138 Pfam PF00571 CBS domain 6 60 8.3E-10 T 09-03-2017 IPR000644 CBS domain BV404_RS09660 a59fa63933ee635586d2896293e2e956 138 Pfam PF00571 CBS domain 73 126 1.4E-13 T 09-03-2017 IPR000644 CBS domain BV404_RS09660 a59fa63933ee635586d2896293e2e956 138 Gene3D G3DSA:3.10.580.10 1 131 3.7E-31 T 09-03-2017 BV404_RS09660 a59fa63933ee635586d2896293e2e956 138 SMART SM00116 13 61 0.15 T 09-03-2017 IPR000644 CBS domain BV404_RS09660 a59fa63933ee635586d2896293e2e956 138 SMART SM00116 80 127 4.1E-9 T 09-03-2017 IPR000644 CBS domain BV404_RS09660 a59fa63933ee635586d2896293e2e956 138 SUPERFAMILY SSF54631 1 126 1.23E-33 T 09-03-2017 BV404_RS10050 69583b950e09693bfd4bd419fc8a9f2f 573 Gene3D G3DSA:3.20.20.60 255 570 9.1E-113 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 BV404_RS10050 69583b950e09693bfd4bd419fc8a9f2f 573 SUPERFAMILY SSF51621 249 549 1.18E-109 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 BV404_RS10050 69583b950e09693bfd4bd419fc8a9f2f 573 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 541 3.0E-123 T 09-03-2017 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 BV404_RS10050 69583b950e09693bfd4bd419fc8a9f2f 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 2.6E-30 T 09-03-2017 BV404_RS10050 69583b950e09693bfd4bd419fc8a9f2f 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 2.6E-30 T 09-03-2017 BV404_RS10050 69583b950e09693bfd4bd419fc8a9f2f 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 2.6E-30 T 09-03-2017 BV404_RS10050 69583b950e09693bfd4bd419fc8a9f2f 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 2.6E-30 T 09-03-2017 BV404_RS10050 69583b950e09693bfd4bd419fc8a9f2f 573 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 4.3E-21 T 09-03-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 BV404_RS10050 69583b950e09693bfd4bd419fc8a9f2f 573 Gene3D G3DSA:1.10.274.10 23 132 8.7E-37 T 09-03-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 BV404_RS10050 69583b950e09693bfd4bd419fc8a9f2f 573 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 5.4E-32 T 09-03-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 BV404_RS10050 69583b950e09693bfd4bd419fc8a9f2f 573 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 09-03-2017 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 BV404_RS10050 69583b950e09693bfd4bd419fc8a9f2f 573 PIRSF PIRSF000732 1 573 9.1E-219 T 09-03-2017 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 BV404_RS10050 69583b950e09693bfd4bd419fc8a9f2f 573 Gene3D G3DSA:3.50.30.10 133 254 2.5E-39 T 09-03-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 BV404_RS10050 69583b950e09693bfd4bd419fc8a9f2f 573 SUPERFAMILY SSF52009 125 243 1.57E-35 T 09-03-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 BV404_RS10050 69583b950e09693bfd4bd419fc8a9f2f 573 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 09-03-2017 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 BV404_RS10050 69583b950e09693bfd4bd419fc8a9f2f 573 SUPERFAMILY SSF47831 24 143 2.48E-32 T 09-03-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 BV404_RS10050 69583b950e09693bfd4bd419fc8a9f2f 573 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 565 3.1E-247 T 09-03-2017 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 BV404_RS00695 5fbead3d89274b88ac2383079a567ddc 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 09-03-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 BV404_RS00695 5fbead3d89274b88ac2383079a567ddc 273 Gene3D G3DSA:2.160.10.10 143 251 7.1E-32 T 09-03-2017 BV404_RS00695 5fbead3d89274b88ac2383079a567ddc 273 Gene3D G3DSA:1.10.3130.10 7 142 2.0E-47 T 09-03-2017 BV404_RS00695 5fbead3d89274b88ac2383079a567ddc 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 3.5E-9 T 09-03-2017 IPR001451 Hexapeptide repeat BV404_RS00695 5fbead3d89274b88ac2383079a567ddc 273 SUPERFAMILY SSF51161 8 259 6.65E-64 T 09-03-2017 IPR011004 Trimeric LpxA-like BV404_RS00695 5fbead3d89274b88ac2383079a567ddc 273 Pfam PF06426 Serine acetyltransferase, N-terminal 9 112 2.1E-38 T 09-03-2017 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 BV404_RS00695 5fbead3d89274b88ac2383079a567ddc 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 82 242 2.7E-75 T 09-03-2017 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 BV404_RS00695 5fbead3d89274b88ac2383079a567ddc 273 SMART SM00971 9 113 1.7E-60 T 09-03-2017 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 BV404_RS08745 8875de1e499b4b0964e5d5047d8432f3 149 Pfam PF06610 L-alanine exporter 8 142 1.3E-66 T 09-03-2017 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 BV404_RS08745 8875de1e499b4b0964e5d5047d8432f3 149 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 15 142 2.0E-62 T 09-03-2017 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 BV404_RS08745 8875de1e499b4b0964e5d5047d8432f3 149 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 2 145 30.682 T 09-03-2017 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 BV404_RS10120 e77a2a710d19993d8bde3a5cb91706cb 627 Gene3D G3DSA:3.90.1310.10 132 253 1.5E-39 T 09-03-2017 BV404_RS10120 e77a2a710d19993d8bde3a5cb91706cb 627 SUPERFAMILY SSF56601 255 619 1.75E-96 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like BV404_RS10120 e77a2a710d19993d8bde3a5cb91706cb 627 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 21 619 3.6E-241 T 09-03-2017 IPR017790 Penicillin-binding protein 2 GO:0016020 BV404_RS10120 e77a2a710d19993d8bde3a5cb91706cb 627 Pfam PF00905 Penicillin binding protein transpeptidase domain 272 616 7.1E-76 T 09-03-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 BV404_RS10120 e77a2a710d19993d8bde3a5cb91706cb 627 Gene3D G3DSA:3.40.710.10 255 619 7.9E-104 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like BV404_RS10120 e77a2a710d19993d8bde3a5cb91706cb 627 SUPERFAMILY SSF56519 57 253 2.09E-56 T 09-03-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 BV404_RS10120 e77a2a710d19993d8bde3a5cb91706cb 627 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 240 8.7E-51 T 09-03-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 BV404_RS00970 f458c70dc0ff8e2a21cfa6d519da71f3 136 SUPERFAMILY SSF54686 3 133 4.58E-53 T 09-03-2017 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 BV404_RS00970 f458c70dc0ff8e2a21cfa6d519da71f3 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 125 3.5E-57 T 09-03-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS00970 f458c70dc0ff8e2a21cfa6d519da71f3 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 2.9E-47 T 09-03-2017 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 BV404_RS00970 f458c70dc0ff8e2a21cfa6d519da71f3 136 Gene3D G3DSA:3.90.1170.10 22 134 1.7E-53 T 09-03-2017 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 BV404_RS00970 f458c70dc0ff8e2a21cfa6d519da71f3 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 09-03-2017 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS00970 f458c70dc0ff8e2a21cfa6d519da71f3 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 4.5E-40 T 09-03-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS00970 f458c70dc0ff8e2a21cfa6d519da71f3 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 4.5E-40 T 09-03-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS00970 f458c70dc0ff8e2a21cfa6d519da71f3 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 4.5E-40 T 09-03-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS00970 f458c70dc0ff8e2a21cfa6d519da71f3 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 4.5E-40 T 09-03-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS00970 f458c70dc0ff8e2a21cfa6d519da71f3 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 37.624 T 09-03-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS06355 acb79da1c339d9dc21700fe6c91c45a1 438 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 27 436 1.6E-86 T 09-03-2017 IPR004681 TRAP transporter permease protein GO:0016021 BV404_RS06355 acb79da1c339d9dc21700fe6c91c45a1 438 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 18 433 2.9E-79 T 09-03-2017 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit BV404_RS06355 acb79da1c339d9dc21700fe6c91c45a1 438 PIRSF PIRSF006066 12 438 4.6E-70 T 09-03-2017 IPR004681 TRAP transporter permease protein GO:0016021 BV404_RS06485 7382762c6874c3172baf75d617e6b94f 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 205 3.9E-20 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BV404_RS06485 7382762c6874c3172baf75d617e6b94f 212 Gene3D G3DSA:1.10.10.10 156 210 1.6E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS06485 7382762c6874c3172baf75d617e6b94f 212 SMART SM00448 5 118 8.4E-33 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS06485 7382762c6874c3172baf75d617e6b94f 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 2.1E-12 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BV404_RS06485 7382762c6874c3172baf75d617e6b94f 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 2.1E-12 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BV404_RS06485 7382762c6874c3172baf75d617e6b94f 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 2.1E-12 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BV404_RS06485 7382762c6874c3172baf75d617e6b94f 212 Pfam PF00072 Response regulator receiver domain 7 119 1.4E-30 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS06485 7382762c6874c3172baf75d617e6b94f 212 Gene3D G3DSA:3.40.50.2300 3 155 2.7E-40 T 09-03-2017 BV404_RS06485 7382762c6874c3172baf75d617e6b94f 212 SMART SM00421 148 205 6.0E-22 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BV404_RS06485 7382762c6874c3172baf75d617e6b94f 212 SUPERFAMILY SSF52172 4 134 3.27E-36 T 09-03-2017 IPR011006 CheY-like superfamily BV404_RS06485 7382762c6874c3172baf75d617e6b94f 212 SUPERFAMILY SSF46894 141 211 2.52E-21 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BV404_RS06485 7382762c6874c3172baf75d617e6b94f 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BV404_RS08670 f3cccc385a33fe1fe4a4348d63a262e7 306 Gene3D G3DSA:1.10.3150.10 15 300 6.8E-52 T 09-03-2017 IPR013976 Metal-dependent hydrolase HDOD BV404_RS08670 f3cccc385a33fe1fe4a4348d63a262e7 306 SUPERFAMILY SSF109604 24 282 3.04E-39 T 09-03-2017 BV404_RS08670 f3cccc385a33fe1fe4a4348d63a262e7 306 Pfam PF08668 HDOD domain 39 233 6.3E-38 T 09-03-2017 IPR013976 Metal-dependent hydrolase HDOD BV404_RS06730 e2ea697a74f7d8a83f2b8ee43068f2fb 232 Gene3D G3DSA:1.20.120.530 84 228 1.0E-31 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal BV404_RS06730 e2ea697a74f7d8a83f2b8ee43068f2fb 232 SUPERFAMILY SSF48008 86 223 1.18E-25 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal BV404_RS06730 e2ea697a74f7d8a83f2b8ee43068f2fb 232 SUPERFAMILY SSF46785 16 106 2.69E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS06730 e2ea697a74f7d8a83f2b8ee43068f2fb 232 SMART SM00345 22 80 1.1E-10 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BV404_RS06730 e2ea697a74f7d8a83f2b8ee43068f2fb 232 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 80 3.3E-13 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BV404_RS06730 e2ea697a74f7d8a83f2b8ee43068f2fb 232 Pfam PF07729 FCD domain 90 215 5.6E-27 T 09-03-2017 IPR011711 GntR, C-terminal BV404_RS06730 e2ea697a74f7d8a83f2b8ee43068f2fb 232 Gene3D G3DSA:1.10.10.10 6 80 2.0E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS06730 e2ea697a74f7d8a83f2b8ee43068f2fb 232 SMART SM00895 90 217 8.1E-25 T 09-03-2017 IPR011711 GntR, C-terminal BV404_RS14415 63c14580234e77e0d338500f0b03d117 596 Gene3D G3DSA:3.90.230.10 301 560 1.4E-59 T 09-03-2017 IPR000994 Peptidase M24, structural domain BV404_RS14415 63c14580234e77e0d338500f0b03d117 596 Gene3D G3DSA:3.40.350.10 5 128 1.1E-22 T 09-03-2017 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal BV404_RS14415 63c14580234e77e0d338500f0b03d117 596 Pfam PF00557 Metallopeptidase family M24 309 525 1.0E-44 T 09-03-2017 IPR000994 Peptidase M24, structural domain BV404_RS14415 63c14580234e77e0d338500f0b03d117 596 Pfam PF01321 Creatinase/Prolidase N-terminal domain 8 138 1.8E-20 T 09-03-2017 IPR000587 Creatinase, N-terminal GO:0016787 BV404_RS14415 63c14580234e77e0d338500f0b03d117 596 SUPERFAMILY SSF55920 303 559 4.19E-57 T 09-03-2017 IPR000994 Peptidase M24, structural domain BV404_RS14415 63c14580234e77e0d338500f0b03d117 596 Pfam PF16189 Creatinase/Prolidase N-terminal domain 148 306 2.9E-30 T 09-03-2017 BV404_RS14415 63c14580234e77e0d338500f0b03d117 596 Pfam PF16188 C-terminal region of peptidase_M24 534 593 2.5E-23 T 09-03-2017 IPR032416 Peptidase M24, C-terminal domain BV404_RS14415 63c14580234e77e0d338500f0b03d117 596 SUPERFAMILY SSF53092 7 132 5.58E-19 T 09-03-2017 IPR028980 Creatinase/Aminopeptidase P, N-terminal BV404_RS14485 48d7c6c092cabf6928ea31826222ef29 395 Pfam PF03486 HI0933-like protein 6 393 4.3E-156 T 09-03-2017 BV404_RS14485 48d7c6c092cabf6928ea31826222ef29 395 Gene3D G3DSA:3.50.50.60 340 393 2.2E-48 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS14485 48d7c6c092cabf6928ea31826222ef29 395 Gene3D G3DSA:3.50.50.60 2 187 2.2E-48 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS14485 48d7c6c092cabf6928ea31826222ef29 395 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 393 8.0E-131 T 09-03-2017 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like BV404_RS14485 48d7c6c092cabf6928ea31826222ef29 395 Gene3D G3DSA:2.40.30.10 190 270 7.3E-29 T 09-03-2017 BV404_RS14485 48d7c6c092cabf6928ea31826222ef29 395 SUPERFAMILY SSF51905 1 189 9.6E-57 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS14485 48d7c6c092cabf6928ea31826222ef29 395 SUPERFAMILY SSF51905 338 395 9.6E-57 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS14485 48d7c6c092cabf6928ea31826222ef29 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.0E-8 T 09-03-2017 BV404_RS14485 48d7c6c092cabf6928ea31826222ef29 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 363 370 1.0E-8 T 09-03-2017 BV404_RS14485 48d7c6c092cabf6928ea31826222ef29 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 156 165 1.0E-8 T 09-03-2017 BV404_RS14485 48d7c6c092cabf6928ea31826222ef29 395 SUPERFAMILY SSF160996 191 339 3.27E-44 T 09-03-2017 BV404_RS14485 48d7c6c092cabf6928ea31826222ef29 395 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.2E-5 T 09-03-2017 BV404_RS14485 48d7c6c092cabf6928ea31826222ef29 395 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 1.2E-5 T 09-03-2017 BV404_RS14485 48d7c6c092cabf6928ea31826222ef29 395 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 348 370 1.2E-5 T 09-03-2017 BV404_RS14485 48d7c6c092cabf6928ea31826222ef29 395 Gene3D G3DSA:1.10.8.260 271 323 4.5E-24 T 09-03-2017 IPR023166 HI0933 insert-like domain BV404_RS00935 7b39ccfbc06c713ed69420c27a7a42d5 209 SUPERFAMILY SSF50447 1 208 1.5E-84 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain BV404_RS00935 7b39ccfbc06c713ed69420c27a7a42d5 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 4.4E-95 T 09-03-2017 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS00935 7b39ccfbc06c713ed69420c27a7a42d5 209 Gene3D G3DSA:2.40.30.10 158 207 8.2E-11 T 09-03-2017 BV404_RS00935 7b39ccfbc06c713ed69420c27a7a42d5 209 Gene3D G3DSA:2.40.30.10 3 32 8.2E-11 T 09-03-2017 BV404_RS00935 7b39ccfbc06c713ed69420c27a7a42d5 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 41.199 T 09-03-2017 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS00935 7b39ccfbc06c713ed69420c27a7a42d5 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 09-03-2017 IPR019926 Ribosomal protein L3, conserved site BV404_RS00935 7b39ccfbc06c713ed69420c27a7a42d5 209 Gene3D G3DSA:4.10.960.10 77 157 1.0E-38 T 09-03-2017 BV404_RS00935 7b39ccfbc06c713ed69420c27a7a42d5 209 Pfam PF00297 Ribosomal protein L3 93 182 2.0E-16 T 09-03-2017 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS12275 94e1aaabd8192655208bcf67341e4058 141 SMART SM00732 3 104 3.2E-36 T 09-03-2017 IPR006641 YqgF/RNase H-like domain GO:0006139 BV404_RS12275 94e1aaabd8192655208bcf67341e4058 141 Gene3D G3DSA:3.30.420.140 3 138 3.9E-41 T 09-03-2017 IPR006641 YqgF/RNase H-like domain GO:0006139 BV404_RS12275 94e1aaabd8192655208bcf67341e4058 141 SUPERFAMILY SSF53098 3 137 1.37E-37 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 BV404_RS12275 94e1aaabd8192655208bcf67341e4058 141 Pfam PF03652 Holliday junction resolvase 4 136 5.9E-36 T 09-03-2017 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 BV404_RS12275 94e1aaabd8192655208bcf67341e4058 141 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 3 139 24.525 T 09-03-2017 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 BV404_RS12275 94e1aaabd8192655208bcf67341e4058 141 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 6 136 2.9E-49 T 09-03-2017 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 BV404_RS05850 0afbd8f7644c63b83245b592fc563f2f 242 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 3 242 43.488 T 09-03-2017 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 BV404_RS05850 0afbd8f7644c63b83245b592fc563f2f 242 Pfam PF13649 Methyltransferase domain 62 158 8.7E-13 T 09-03-2017 BV404_RS05850 0afbd8f7644c63b83245b592fc563f2f 242 SUPERFAMILY SSF53335 20 242 6.66E-39 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS05850 0afbd8f7644c63b83245b592fc563f2f 242 PIRSF PIRSF006325 1 242 1.1E-125 T 09-03-2017 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 BV404_RS05850 0afbd8f7644c63b83245b592fc563f2f 242 Gene3D G3DSA:3.40.50.150 19 241 2.4E-63 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS05850 0afbd8f7644c63b83245b592fc563f2f 242 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 4 242 3.8E-119 T 09-03-2017 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 BV404_RS03715 9d6b344cdec0a8b1172f01aba64dee8e 149 Pfam PF01475 Ferric uptake regulator family 11 130 9.1E-47 T 09-03-2017 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 BV404_RS03715 9d6b344cdec0a8b1172f01aba64dee8e 149 Gene3D G3DSA:1.10.10.10 2 82 9.9E-31 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS03715 9d6b344cdec0a8b1172f01aba64dee8e 149 SUPERFAMILY SSF46785 5 135 1.36E-43 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS04930 7c9430dff3586ecfabf9c97ca57f6056 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 369 383 6.7E-12 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS04930 7c9430dff3586ecfabf9c97ca57f6056 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 419 6.7E-12 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS04930 7c9430dff3586ecfabf9c97ca57f6056 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 397 6.7E-12 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS04930 7c9430dff3586ecfabf9c97ca57f6056 453 SMART SM00387 332 445 2.1E-31 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS04930 7c9430dff3586ecfabf9c97ca57f6056 453 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 335 442 2.5E-20 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS04930 7c9430dff3586ecfabf9c97ca57f6056 453 SMART SM00388 223 288 2.2E-14 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS04930 7c9430dff3586ecfabf9c97ca57f6056 453 Gene3D G3DSA:1.10.287.130 215 284 1.9E-13 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS04930 7c9430dff3586ecfabf9c97ca57f6056 453 Pfam PF00512 His Kinase A (phospho-acceptor) domain 224 287 2.2E-13 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS04930 7c9430dff3586ecfabf9c97ca57f6056 453 SUPERFAMILY SSF55874 278 443 2.36E-34 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS04930 7c9430dff3586ecfabf9c97ca57f6056 453 Gene3D G3DSA:3.30.565.10 293 445 8.2E-36 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS04930 7c9430dff3586ecfabf9c97ca57f6056 453 SUPERFAMILY SSF47384 207 287 2.35E-16 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS10145 65fb6203767e87814f29ce98d906c38e 218 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 70 85 - T 09-03-2017 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 BV404_RS10145 65fb6203767e87814f29ce98d906c38e 218 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 26 203 1.4E-72 T 09-03-2017 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 BV404_RS10145 65fb6203767e87814f29ce98d906c38e 218 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 74 127 9.0E-24 T 09-03-2017 BV404_RS10145 65fb6203767e87814f29ce98d906c38e 218 Hamap MF_00013 Octanoyltransferase [lipB]. 4 205 38.666 T 09-03-2017 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 BV404_RS10145 65fb6203767e87814f29ce98d906c38e 218 PIRSF PIRSF016262 1 215 5.6E-63 T 09-03-2017 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 BV404_RS10145 65fb6203767e87814f29ce98d906c38e 218 Gene3D G3DSA:3.90.1550.10 3 202 3.1E-73 T 09-03-2017 BV404_RS10145 65fb6203767e87814f29ce98d906c38e 218 SUPERFAMILY SSF55681 3 205 8.29E-72 T 09-03-2017 BV404_RS10145 65fb6203767e87814f29ce98d906c38e 218 Pfam PF03099 Biotin/lipoate A/B protein ligase family 58 158 1.4E-8 T 09-03-2017 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 BV404_RS11825 27791f4b7cc0794c0dd241faf1f81e5c 424 SUPERFAMILY SSF54631 192 329 5.43E-25 T 09-03-2017 BV404_RS11825 27791f4b7cc0794c0dd241faf1f81e5c 424 Pfam PF03471 Transporter associated domain 344 419 8.1E-17 T 09-03-2017 IPR005170 Transporter-associated domain BV404_RS11825 27791f4b7cc0794c0dd241faf1f81e5c 424 Gene3D G3DSA:3.30.465.10 319 418 8.9E-23 T 09-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 BV404_RS11825 27791f4b7cc0794c0dd241faf1f81e5c 424 Pfam PF00571 CBS domain 278 326 4.6E-5 T 09-03-2017 IPR000644 CBS domain BV404_RS11825 27791f4b7cc0794c0dd241faf1f81e5c 424 Pfam PF01595 Domain of unknown function DUF21 13 181 9.0E-50 T 09-03-2017 IPR002550 Domain of unknown function DUF21 BV404_RS11825 27791f4b7cc0794c0dd241faf1f81e5c 424 SMART SM01091 342 420 1.1E-23 T 09-03-2017 IPR005170 Transporter-associated domain BV404_RS11825 27791f4b7cc0794c0dd241faf1f81e5c 424 SUPERFAMILY SSF56176 340 421 9.0E-21 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 BV404_RS11825 27791f4b7cc0794c0dd241faf1f81e5c 424 Gene3D G3DSA:3.10.580.10 192 318 1.8E-13 T 09-03-2017 BV404_RS06310 13720efb7cc6e8f23c37ad4bc4dd59aa 1536 Gene3D G3DSA:2.60.40.60 401 501 1.6E-9 T 09-03-2017 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 BV404_RS06310 13720efb7cc6e8f23c37ad4bc4dd59aa 1536 Gene3D G3DSA:2.60.40.60 524 624 1.6E-9 T 09-03-2017 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 BV404_RS06310 13720efb7cc6e8f23c37ad4bc4dd59aa 1536 Gene3D G3DSA:2.60.40.60 647 747 1.6E-9 T 09-03-2017 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 BV404_RS06310 13720efb7cc6e8f23c37ad4bc4dd59aa 1536 Gene3D G3DSA:2.60.40.60 770 870 1.6E-9 T 09-03-2017 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 BV404_RS06310 13720efb7cc6e8f23c37ad4bc4dd59aa 1536 Gene3D G3DSA:2.60.40.60 278 378 2.0E-9 T 09-03-2017 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 BV404_RS06310 13720efb7cc6e8f23c37ad4bc4dd59aa 1536 SUPERFAMILY SSF49313 401 499 5.14E-8 T 09-03-2017 IPR015919 Cadherin-like GO:0005509|GO:0016020 BV404_RS06310 13720efb7cc6e8f23c37ad4bc4dd59aa 1536 SUPERFAMILY SSF49313 278 376 5.28E-8 T 09-03-2017 IPR015919 Cadherin-like GO:0005509|GO:0016020 BV404_RS06310 13720efb7cc6e8f23c37ad4bc4dd59aa 1536 SUPERFAMILY SSF49313 770 868 5.14E-8 T 09-03-2017 IPR015919 Cadherin-like GO:0005509|GO:0016020 BV404_RS06310 13720efb7cc6e8f23c37ad4bc4dd59aa 1536 SUPERFAMILY SSF49313 893 989 8.42E-8 T 09-03-2017 IPR015919 Cadherin-like GO:0005509|GO:0016020 BV404_RS06310 13720efb7cc6e8f23c37ad4bc4dd59aa 1536 Gene3D G3DSA:2.60.40.60 139 254 4.7E-9 T 09-03-2017 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 BV404_RS06310 13720efb7cc6e8f23c37ad4bc4dd59aa 1536 SUPERFAMILY SSF49313 156 254 1.71E-8 T 09-03-2017 IPR015919 Cadherin-like GO:0005509|GO:0016020 BV404_RS06310 13720efb7cc6e8f23c37ad4bc4dd59aa 1536 SUPERFAMILY SSF49313 999 1105 8.85E-12 T 09-03-2017 IPR015919 Cadherin-like GO:0005509|GO:0016020 BV404_RS06310 13720efb7cc6e8f23c37ad4bc4dd59aa 1536 SUPERFAMILY SSF49313 647 745 5.14E-8 T 09-03-2017 IPR015919 Cadherin-like GO:0005509|GO:0016020 BV404_RS06310 13720efb7cc6e8f23c37ad4bc4dd59aa 1536 SMART SM00112 297 388 0.048 T 09-03-2017 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 BV404_RS06310 13720efb7cc6e8f23c37ad4bc4dd59aa 1536 SMART SM00112 912 1003 0.0022 T 09-03-2017 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 BV404_RS06310 13720efb7cc6e8f23c37ad4bc4dd59aa 1536 SMART SM00112 789 880 0.045 T 09-03-2017 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 BV404_RS06310 13720efb7cc6e8f23c37ad4bc4dd59aa 1536 SMART SM00112 174 265 0.46 T 09-03-2017 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 BV404_RS06310 13720efb7cc6e8f23c37ad4bc4dd59aa 1536 SMART SM00112 1026 1115 0.001 T 09-03-2017 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 BV404_RS06310 13720efb7cc6e8f23c37ad4bc4dd59aa 1536 SMART SM00112 666 757 0.045 T 09-03-2017 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 BV404_RS06310 13720efb7cc6e8f23c37ad4bc4dd59aa 1536 SMART SM00112 543 634 0.045 T 09-03-2017 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 BV404_RS06310 13720efb7cc6e8f23c37ad4bc4dd59aa 1536 SMART SM00112 420 511 0.045 T 09-03-2017 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 BV404_RS06310 13720efb7cc6e8f23c37ad4bc4dd59aa 1536 SUPERFAMILY SSF49313 524 622 5.14E-8 T 09-03-2017 IPR015919 Cadherin-like GO:0005509|GO:0016020 BV404_RS06310 13720efb7cc6e8f23c37ad4bc4dd59aa 1536 Gene3D G3DSA:2.60.40.60 1003 1117 6.1E-13 T 09-03-2017 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 BV404_RS06310 13720efb7cc6e8f23c37ad4bc4dd59aa 1536 Gene3D G3DSA:2.60.40.60 891 1002 4.7E-10 T 09-03-2017 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 BV404_RS08265 cf18079105e8818a067b607f2cc73d0e 289 SUPERFAMILY SSF56317 3 282 4.71E-82 T 09-03-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 BV404_RS08265 cf18079105e8818a067b607f2cc73d0e 289 TIGRFAM TIGR03381 agmatine_aguB: N-carbamoylputrescine amidase 5 282 1.7E-139 T 09-03-2017 IPR017755 N-carbamoylputrescine amidase GO:0006596|GO:0050126 KEGG: 00330+3.5.1.53|MetaCyc: PWY-43 BV404_RS08265 cf18079105e8818a067b607f2cc73d0e 289 Pfam PF00795 Carbon-nitrogen hydrolase 8 266 5.1E-57 T 09-03-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 BV404_RS08265 cf18079105e8818a067b607f2cc73d0e 289 Gene3D G3DSA:3.60.110.10 3 282 1.3E-95 T 09-03-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 BV404_RS05935 ba440a2ea760f90ea2199b72ecd46827 301 Pfam PF01368 DHH family 2 142 5.4E-21 T 09-03-2017 IPR001667 DDH domain BV404_RS05935 ba440a2ea760f90ea2199b72ecd46827 301 Pfam PF02833 DHHA2 domain 181 297 1.9E-16 T 09-03-2017 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 BV404_RS05935 ba440a2ea760f90ea2199b72ecd46827 301 Gene3D G3DSA:3.90.1640.10 2 173 1.8E-54 T 09-03-2017 BV404_RS05935 ba440a2ea760f90ea2199b72ecd46827 301 SMART SM01131 178 300 7.2E-36 T 09-03-2017 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 BV404_RS05935 ba440a2ea760f90ea2199b72ecd46827 301 SUPERFAMILY SSF64182 1 298 1.57E-67 T 09-03-2017 BV404_RS06120 42536a9ddf5475f1b4a61866341e35f5 365 Pfam PF12698 ABC-2 family transporter protein 24 356 2.3E-47 T 09-03-2017 BV404_RS06120 42536a9ddf5475f1b4a61866341e35f5 365 PRINTS PR00164 ABC-2 type transport system membrane protein signature 250 274 5.2E-6 T 09-03-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 BV404_RS06120 42536a9ddf5475f1b4a61866341e35f5 365 PRINTS PR00164 ABC-2 type transport system membrane protein signature 307 326 5.2E-6 T 09-03-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 BV404_RS06120 42536a9ddf5475f1b4a61866341e35f5 365 PRINTS PR00164 ABC-2 type transport system membrane protein signature 287 306 5.2E-6 T 09-03-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 BV404_RS05885 e65b2026c31e3d88f9e2690f85102cfa 142 Pfam PF05232 Chlorhexidine efflux transporter 69 131 2.3E-23 T 09-03-2017 IPR007896 Chlorhexidine efflux transporter BV404_RS05885 e65b2026c31e3d88f9e2690f85102cfa 142 Pfam PF05232 Chlorhexidine efflux transporter 1 63 3.9E-25 T 09-03-2017 IPR007896 Chlorhexidine efflux transporter BV404_RS02095 2d9327656bc3a8265d39bdf7909f11c4 800 Gene3D G3DSA:1.50.10.10 511 609 2.4E-4 T 09-03-2017 IPR012341 Six-hairpin glycosidase GO:0003824 BV404_RS02095 2d9327656bc3a8265d39bdf7909f11c4 800 Gene3D G3DSA:2.60.420.10 723 786 1.1E-10 T 09-03-2017 BV404_RS02095 2d9327656bc3a8265d39bdf7909f11c4 800 Pfam PF06165 Glycosyltransferase family 36 21 267 3.5E-85 T 09-03-2017 IPR010383 Glycosyl hydrolase 94 BV404_RS02095 2d9327656bc3a8265d39bdf7909f11c4 800 SUPERFAMILY SSF74650 1 269 3.14E-81 T 09-03-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 BV404_RS02095 2d9327656bc3a8265d39bdf7909f11c4 800 SMART SM01068 1 63 9.9E-19 T 09-03-2017 IPR009342 Putative carbohydrate binding domain BV404_RS02095 2d9327656bc3a8265d39bdf7909f11c4 800 SUPERFAMILY SSF48208 273 783 1.7E-105 T 09-03-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 BV404_RS02095 2d9327656bc3a8265d39bdf7909f11c4 800 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 296 728 3.4E-206 T 09-03-2017 IPR033432 Glycosyl hydrolase 36, catalytic domain BV404_RS02095 2d9327656bc3a8265d39bdf7909f11c4 800 Gene3D G3DSA:2.70.98.40 1 325 1.5E-102 T 09-03-2017 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 BV404_RS02505 686e55353ad04457b708e98da33768dc 558 Pfam PF07694 5TMR of 5TMR-LYT 25 194 7.7E-60 T 09-03-2017 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 BV404_RS02505 686e55353ad04457b708e98da33768dc 558 Gene3D G3DSA:3.30.450.40 248 346 3.4E-5 T 09-03-2017 IPR029016 GAF domain-like BV404_RS02505 686e55353ad04457b708e98da33768dc 558 Pfam PF06580 Histidine kinase 366 444 8.3E-28 T 09-03-2017 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 BV404_RS02505 686e55353ad04457b708e98da33768dc 558 SUPERFAMILY SSF55781 227 351 3.08E-8 T 09-03-2017 IPR029016 GAF domain-like BV404_RS02505 686e55353ad04457b708e98da33768dc 558 Pfam PF13492 GAF domain 242 351 1.1E-7 T 09-03-2017 IPR003018 GAF domain GO:0005515 BV404_RS02505 686e55353ad04457b708e98da33768dc 558 SUPERFAMILY SSF55874 420 553 5.89E-10 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS02505 686e55353ad04457b708e98da33768dc 558 Gene3D G3DSA:3.30.565.10 414 554 5.7E-10 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS18590 0400ff78bc618449b0a31a3b6d49357b 418 SUPERFAMILY SSF52518 34 411 6.54E-87 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold BV404_RS18590 0400ff78bc618449b0a31a3b6d49357b 418 Gene3D G3DSA:3.40.50.970 32 416 3.6E-79 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold BV404_RS18590 0400ff78bc618449b0a31a3b6d49357b 418 Pfam PF00676 Dehydrogenase E1 component 91 383 5.0E-49 T 09-03-2017 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 BV404_RS08935 cdd844c3dd67a7a523e0f541abc5b1f2 246 Gene3D G3DSA:3.80.30.10 69 245 2.3E-70 T 09-03-2017 BV404_RS08935 cdd844c3dd67a7a523e0f541abc5b1f2 246 SUPERFAMILY SSF102114 23 220 1.04E-27 T 09-03-2017 BV404_RS08935 cdd844c3dd67a7a523e0f541abc5b1f2 246 Pfam PF04055 Radical SAM superfamily 24 179 5.7E-31 T 09-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 BV404_RS08935 cdd844c3dd67a7a523e0f541abc5b1f2 246 Pfam PF13353 4Fe-4S single cluster domain 16 138 1.0E-19 T 09-03-2017 BV404_RS08935 cdd844c3dd67a7a523e0f541abc5b1f2 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 09-03-2017 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 BV404_RS08935 cdd844c3dd67a7a523e0f541abc5b1f2 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 239 2.0E-108 T 09-03-2017 IPR012838 Pyruvate formate-lyase activating enzyme GO:0043365|GO:0055114 BV404_RS11330 6530f61f769fa5bdc698e58db5c55ed5 62 Pfam PF04964 Flp/Fap pilin component 11 56 1.8E-7 T 09-03-2017 IPR007047 Flp/Fap pilin component BV404_RS01115 9f1d17b9992ce0b73588cce4f2b5f9f4 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 57.808 T 09-03-2017 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 BV404_RS01115 9f1d17b9992ce0b73588cce4f2b5f9f4 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 7.2E-162 T 09-03-2017 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 BV404_RS01115 9f1d17b9992ce0b73588cce4f2b5f9f4 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 1.0E-63 T 09-03-2017 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 BV404_RS01115 9f1d17b9992ce0b73588cce4f2b5f9f4 302 SUPERFAMILY SSF52402 6 209 1.16E-72 T 09-03-2017 BV404_RS01115 9f1d17b9992ce0b73588cce4f2b5f9f4 302 PIRSF PIRSF002936 1 302 4.5E-156 T 09-03-2017 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 BV404_RS01115 9f1d17b9992ce0b73588cce4f2b5f9f4 302 Gene3D G3DSA:3.40.50.620 3 210 8.5E-62 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS01115 9f1d17b9992ce0b73588cce4f2b5f9f4 302 Gene3D G3DSA:3.40.50.620 244 253 8.5E-62 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS04985 3306549d0abe68bf652d61fcd86dcb52 204 Gene3D G3DSA:1.10.10.10 148 198 4.0E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS04985 3306549d0abe68bf652d61fcd86dcb52 204 ProSitePatterns PS00622 LuxR-type HTH domain signature. 156 183 - T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BV404_RS04985 3306549d0abe68bf652d61fcd86dcb52 204 SUPERFAMILY SSF46894 133 197 3.74E-16 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BV404_RS04985 3306549d0abe68bf652d61fcd86dcb52 204 Pfam PF00072 Response regulator receiver domain 10 119 8.5E-26 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS04985 3306549d0abe68bf652d61fcd86dcb52 204 Gene3D G3DSA:3.40.50.2300 8 147 2.3E-32 T 09-03-2017 BV404_RS04985 3306549d0abe68bf652d61fcd86dcb52 204 SUPERFAMILY SSF52172 8 139 1.71E-32 T 09-03-2017 IPR011006 CheY-like superfamily BV404_RS04985 3306549d0abe68bf652d61fcd86dcb52 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 172 1.4E-11 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BV404_RS04985 3306549d0abe68bf652d61fcd86dcb52 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 184 1.4E-11 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BV404_RS04985 3306549d0abe68bf652d61fcd86dcb52 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 156 1.4E-11 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BV404_RS04985 3306549d0abe68bf652d61fcd86dcb52 204 SMART SM00448 8 119 2.0E-26 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS04985 3306549d0abe68bf652d61fcd86dcb52 204 Pfam PF00196 Bacterial regulatory proteins, luxR family 141 193 7.1E-18 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BV404_RS04985 3306549d0abe68bf652d61fcd86dcb52 204 SMART SM00421 139 196 2.4E-16 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BV404_RS10470 e365dc98c9b3a11015bc4ccb41c47b95 563 Pfam PF00128 Alpha amylase, catalytic domain 33 376 8.1E-127 T 09-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BV404_RS10470 e365dc98c9b3a11015bc4ccb41c47b95 563 SMART SM00642 18 419 2.7E-164 T 09-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BV404_RS10470 e365dc98c9b3a11015bc4ccb41c47b95 563 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 10 557 3.9E-264 T 09-03-2017 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 BV404_RS10470 e365dc98c9b3a11015bc4ccb41c47b95 563 Gene3D G3DSA:3.20.20.80 180 478 4.8E-127 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 BV404_RS10470 e365dc98c9b3a11015bc4ccb41c47b95 563 Gene3D G3DSA:3.20.20.80 9 109 4.8E-127 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 BV404_RS10470 e365dc98c9b3a11015bc4ccb41c47b95 563 Gene3D G3DSA:3.90.400.10 110 179 3.7E-31 T 09-03-2017 BV404_RS10470 e365dc98c9b3a11015bc4ccb41c47b95 563 SUPERFAMILY SSF51011 480 559 1.98E-14 T 09-03-2017 BV404_RS10470 e365dc98c9b3a11015bc4ccb41c47b95 563 SUPERFAMILY SSF51445 9 475 8.52E-159 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily BV404_RS10470 e365dc98c9b3a11015bc4ccb41c47b95 563 Gene3D G3DSA:2.60.40.1180 481 559 1.9E-17 T 09-03-2017 IPR013780 Glycosyl hydrolase, all-beta BV404_RS09320 4b3d1a2b399bed06a72702f3a90d764f 206 Pfam PF01810 LysE type translocator 16 204 1.6E-27 T 09-03-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 BV404_RS09320 4b3d1a2b399bed06a72702f3a90d764f 206 PIRSF PIRSF006324 1 206 2.6E-44 T 09-03-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 BV404_RS10950 758cca63da9b900511f3083e653000d4 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 09-03-2017 IPR017870 FeS cluster insertion, C-terminal, conserved site BV404_RS10950 758cca63da9b900511f3083e653000d4 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 1.7E-38 T 09-03-2017 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 BV404_RS10950 758cca63da9b900511f3083e653000d4 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 6.2E-58 T 09-03-2017 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0016226|GO:0051536 BV404_RS10950 758cca63da9b900511f3083e653000d4 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 5.3E-27 T 09-03-2017 IPR000361 FeS cluster biogenesis BV404_RS10950 758cca63da9b900511f3083e653000d4 107 TIGRFAM TIGR01997 sufA_proteo: FeS assembly scaffold SufA 2 107 1.6E-41 T 09-03-2017 IPR011298 FeS assembly scaffold SufA GO:0016226 BV404_RS10950 758cca63da9b900511f3083e653000d4 107 Gene3D G3DSA:2.60.300.12 2 97 4.7E-37 T 09-03-2017 IPR000361 FeS cluster biogenesis BV404_RS10950 758cca63da9b900511f3083e653000d4 107 SUPERFAMILY SSF89360 1 96 2.09E-34 T 09-03-2017 IPR000361 FeS cluster biogenesis BV404_RS10870 45f6a43cad4100de599644d49d2455e3 461 Pfam PF13742 OB-fold nucleic acid binding domain 28 121 4.3E-29 T 09-03-2017 IPR025824 OB-fold nucleic acid binding domain GO:0003676 BV404_RS10870 45f6a43cad4100de599644d49d2455e3 461 Pfam PF02601 Exonuclease VII, large subunit 144 458 7.2E-103 T 09-03-2017 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 BV404_RS10870 45f6a43cad4100de599644d49d2455e3 461 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 25 461 31.03 T 09-03-2017 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 BV404_RS10870 45f6a43cad4100de599644d49d2455e3 461 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 29 383 5.5E-137 T 09-03-2017 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 BV404_RS00400 fb80fc9f71a122a708c50c5c54586437 209 SUPERFAMILY SSF52172 4 131 1.1E-24 T 09-03-2017 IPR011006 CheY-like superfamily BV404_RS00400 fb80fc9f71a122a708c50c5c54586437 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 3.6E-11 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BV404_RS00400 fb80fc9f71a122a708c50c5c54586437 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 3.6E-11 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BV404_RS00400 fb80fc9f71a122a708c50c5c54586437 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 3.6E-11 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BV404_RS00400 fb80fc9f71a122a708c50c5c54586437 209 SMART SM00448 5 119 1.7E-18 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS00400 fb80fc9f71a122a708c50c5c54586437 209 Gene3D G3DSA:3.40.50.2300 4 131 1.3E-27 T 09-03-2017 BV404_RS00400 fb80fc9f71a122a708c50c5c54586437 209 SMART SM00421 147 204 7.3E-23 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BV404_RS00400 fb80fc9f71a122a708c50c5c54586437 209 Gene3D G3DSA:1.10.10.10 143 206 9.9E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS00400 fb80fc9f71a122a708c50c5c54586437 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 8.3E-20 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BV404_RS00400 fb80fc9f71a122a708c50c5c54586437 209 Pfam PF00072 Response regulator receiver domain 7 120 4.2E-21 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS00400 fb80fc9f71a122a708c50c5c54586437 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BV404_RS00400 fb80fc9f71a122a708c50c5c54586437 209 SUPERFAMILY SSF46894 140 206 6.46E-20 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BV404_RS08425 1135a9850fc34b209c2d8744a8083cfa 319 Gene3D G3DSA:3.50.50.60 234 315 3.0E-9 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS08425 1135a9850fc34b209c2d8744a8083cfa 319 Gene3D G3DSA:3.50.50.60 120 233 8.7E-35 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS08425 1135a9850fc34b209c2d8744a8083cfa 319 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 5.6E-48 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS08425 1135a9850fc34b209c2d8744a8083cfa 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 1.1E-38 T 09-03-2017 BV404_RS08425 1135a9850fc34b209c2d8744a8083cfa 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.1E-38 T 09-03-2017 BV404_RS08425 1135a9850fc34b209c2d8744a8083cfa 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 1.1E-38 T 09-03-2017 BV404_RS08425 1135a9850fc34b209c2d8744a8083cfa 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 1.1E-38 T 09-03-2017 BV404_RS08425 1135a9850fc34b209c2d8744a8083cfa 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 1.1E-38 T 09-03-2017 BV404_RS08425 1135a9850fc34b209c2d8744a8083cfa 319 Gene3D G3DSA:3.50.50.60 5 119 4.1E-34 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS08425 1135a9850fc34b209c2d8744a8083cfa 319 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 4.4E-124 T 09-03-2017 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 BV404_RS08425 1135a9850fc34b209c2d8744a8083cfa 319 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 09-03-2017 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 BV404_RS08425 1135a9850fc34b209c2d8744a8083cfa 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 2.4E-76 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BV404_RS08425 1135a9850fc34b209c2d8744a8083cfa 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 2.4E-76 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BV404_RS08425 1135a9850fc34b209c2d8744a8083cfa 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 2.4E-76 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BV404_RS08425 1135a9850fc34b209c2d8744a8083cfa 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 2.4E-76 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BV404_RS08425 1135a9850fc34b209c2d8744a8083cfa 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 2.4E-76 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BV404_RS08425 1135a9850fc34b209c2d8744a8083cfa 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 2.4E-76 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BV404_RS08425 1135a9850fc34b209c2d8744a8083cfa 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 2.4E-76 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BV404_RS08425 1135a9850fc34b209c2d8744a8083cfa 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 2.4E-76 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BV404_RS08425 1135a9850fc34b209c2d8744a8083cfa 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 2.4E-76 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BV404_RS08425 1135a9850fc34b209c2d8744a8083cfa 319 SUPERFAMILY SSF51905 2 313 1.73E-54 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS12205 779c494da1ae65f875f19d3c81923852 287 Gene3D G3DSA:2.30.30.60 135 184 4.7E-18 T 09-03-2017 BV404_RS12205 779c494da1ae65f875f19d3c81923852 287 SUPERFAMILY SSF82861 33 118 1.7E-17 T 09-03-2017 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 BV404_RS12205 779c494da1ae65f875f19d3c81923852 287 Pfam PF00924 Mechanosensitive ion channel 77 274 9.6E-57 T 09-03-2017 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 BV404_RS12205 779c494da1ae65f875f19d3c81923852 287 SUPERFAMILY SSF50182 120 185 2.62E-16 T 09-03-2017 IPR010920 LSM domain BV404_RS12205 779c494da1ae65f875f19d3c81923852 287 Pfam PF05552 Conserved TM helix 21 69 8.6E-12 T 09-03-2017 IPR008910 Conserved TM helix BV404_RS12205 779c494da1ae65f875f19d3c81923852 287 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 149 183 - T 09-03-2017 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 BV404_RS12205 779c494da1ae65f875f19d3c81923852 287 SUPERFAMILY SSF82689 186 284 7.98E-35 T 09-03-2017 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 BV404_RS12205 779c494da1ae65f875f19d3c81923852 287 Gene3D G3DSA:3.30.70.100 188 272 2.2E-31 T 09-03-2017 BV404_RS05780 a91fa684e5db26aa1da26db9de69559d 229 Pfam PF09335 SNARE associated Golgi protein 65 181 2.1E-23 T 09-03-2017 IPR032816 SNARE associated Golgi protein BV404_RS03485 46c1b2f557b2b92782ab2b785c6fd262 95 PIRSF PIRSF037266 1 94 9.9E-41 T 09-03-2017 IPR017162 Uncharacterised conserved protein UCP037266 BV404_RS03485 46c1b2f557b2b92782ab2b785c6fd262 95 Pfam PF09904 Winged helix-turn helix 4 90 4.9E-37 T 09-03-2017 IPR017162 Uncharacterised conserved protein UCP037266 BV404_RS19135 9f84c887e2948a6759c03f89fa6225aa 186 Pfam PF00817 impB/mucB/samB family 2 120 6.1E-7 T 09-03-2017 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 BV404_RS19135 9f84c887e2948a6759c03f89fa6225aa 186 SUPERFAMILY SSF56672 2 182 2.22E-26 T 09-03-2017 BV404_RS00625 8dba0ed2b3d924fa5fa859ff08dfd062 567 SUPERFAMILY SSF56672 80 412 1.04E-52 T 09-03-2017 BV404_RS00625 8dba0ed2b3d924fa5fa859ff08dfd062 567 Pfam PF01844 HNH endonuclease 507 552 5.2E-10 T 09-03-2017 IPR002711 HNH endonuclease GO:0003676|GO:0004519 BV404_RS00625 8dba0ed2b3d924fa5fa859ff08dfd062 567 Pfam PF13655 N-terminal domain of reverse transcriptase 19 100 3.2E-32 T 09-03-2017 IPR025960 Reverse transcriptase, N-terminal domain BV404_RS00625 8dba0ed2b3d924fa5fa859ff08dfd062 567 Pfam PF08388 Group II intron, maturase-specific domain 347 425 7.1E-23 T 09-03-2017 IPR013597 Group II intron, maturase-specific BV404_RS00625 8dba0ed2b3d924fa5fa859ff08dfd062 567 SMART SM00507 495 548 9.6E-14 T 09-03-2017 IPR003615 HNH nuclease BV404_RS00625 8dba0ed2b3d924fa5fa859ff08dfd062 567 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 115 331 5.6E-43 T 09-03-2017 IPR000477 Reverse transcriptase domain BV404_RS00625 8dba0ed2b3d924fa5fa859ff08dfd062 567 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 64 410 5.3E-119 T 09-03-2017 IPR030931 Group II intron reverse transcriptase/maturase BV404_RS14255 1b3b04843c8bb71775a59739c3306c63 244 Gene3D G3DSA:1.10.3720.10 40 240 4.1E-50 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS14255 1b3b04843c8bb71775a59739c3306c63 244 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 59 240 5.1E-25 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS14255 1b3b04843c8bb71775a59739c3306c63 244 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 37 135 3.0E-29 T 09-03-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 BV404_RS14255 1b3b04843c8bb71775a59739c3306c63 244 SUPERFAMILY SSF161098 40 226 8.11E-47 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS03665 c27dfe1a02d6d5bc3c62ae86fe09fd54 308 SUPERFAMILY SSF53850 94 302 7.42E-35 T 09-03-2017 BV404_RS03665 c27dfe1a02d6d5bc3c62ae86fe09fd54 308 Gene3D G3DSA:3.40.190.10 96 180 5.5E-22 T 09-03-2017 BV404_RS03665 c27dfe1a02d6d5bc3c62ae86fe09fd54 308 Gene3D G3DSA:1.10.10.10 8 78 1.7E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS03665 c27dfe1a02d6d5bc3c62ae86fe09fd54 308 Pfam PF03466 LysR substrate binding domain 92 300 1.4E-33 T 09-03-2017 IPR005119 LysR, substrate-binding BV404_RS03665 c27dfe1a02d6d5bc3c62ae86fe09fd54 308 Gene3D G3DSA:3.40.190.10 181 266 5.5E-18 T 09-03-2017 BV404_RS03665 c27dfe1a02d6d5bc3c62ae86fe09fd54 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 2.0E-17 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS03665 c27dfe1a02d6d5bc3c62ae86fe09fd54 308 SUPERFAMILY SSF46785 9 115 8.16E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS14420 6a1aa952ba7317bb4444a835c4fa89b2 313 Gene3D G3DSA:3.40.190.10 284 306 1.1E-18 T 09-03-2017 BV404_RS14420 6a1aa952ba7317bb4444a835c4fa89b2 313 Gene3D G3DSA:3.40.190.10 92 183 1.1E-18 T 09-03-2017 BV404_RS14420 6a1aa952ba7317bb4444a835c4fa89b2 313 Gene3D G3DSA:3.40.190.10 184 280 1.5E-32 T 09-03-2017 BV404_RS14420 6a1aa952ba7317bb4444a835c4fa89b2 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 2.9E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS14420 6a1aa952ba7317bb4444a835c4fa89b2 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 2.9E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS14420 6a1aa952ba7317bb4444a835c4fa89b2 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 2.9E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS14420 6a1aa952ba7317bb4444a835c4fa89b2 313 Gene3D G3DSA:1.10.10.10 2 89 7.0E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS14420 6a1aa952ba7317bb4444a835c4fa89b2 313 SUPERFAMILY SSF53850 92 306 9.31E-47 T 09-03-2017 BV404_RS14420 6a1aa952ba7317bb4444a835c4fa89b2 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 2.7E-16 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS14420 6a1aa952ba7317bb4444a835c4fa89b2 313 Pfam PF03466 LysR substrate binding domain 96 307 3.4E-29 T 09-03-2017 IPR005119 LysR, substrate-binding BV404_RS14420 6a1aa952ba7317bb4444a835c4fa89b2 313 SUPERFAMILY SSF46785 7 85 4.49E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS14395 e95b87bf7261b9e0d753b83a400d2dd0 309 SUPERFAMILY SSF53850 17 293 6.08E-90 T 09-03-2017 BV404_RS14395 e95b87bf7261b9e0d753b83a400d2dd0 309 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 24 277 7.6E-63 T 09-03-2017 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 BV404_RS14395 e95b87bf7261b9e0d753b83a400d2dd0 309 Gene3D G3DSA:3.40.190.100 110 226 5.2E-21 T 09-03-2017 BV404_RS14395 e95b87bf7261b9e0d753b83a400d2dd0 309 Gene3D G3DSA:3.40.190.10 227 292 7.1E-47 T 09-03-2017 BV404_RS14395 e95b87bf7261b9e0d753b83a400d2dd0 309 Gene3D G3DSA:3.40.190.10 19 105 7.1E-47 T 09-03-2017 BV404_RS14395 e95b87bf7261b9e0d753b83a400d2dd0 309 TIGRFAM TIGR03414 ABC_choline_bnd: choline ABC transporter, periplasmic binding protein 18 304 9.0E-146 T 09-03-2017 IPR017783 ABC transporter, choline, substrate-binding protein GO:0015871|GO:0033265|GO:0042597 BV404_RS10820 7f80b9cf709c9cc09cd8a5e93cc53cf1 420 Pfam PF01266 FAD dependent oxidoreductase 3 398 2.1E-65 T 09-03-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 BV404_RS10820 7f80b9cf709c9cc09cd8a5e93cc53cf1 420 Gene3D G3DSA:3.50.50.60 190 269 1.3E-47 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS10820 7f80b9cf709c9cc09cd8a5e93cc53cf1 420 Gene3D G3DSA:3.50.50.60 360 417 1.3E-47 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS10820 7f80b9cf709c9cc09cd8a5e93cc53cf1 420 Gene3D G3DSA:3.50.50.60 108 122 1.3E-47 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS10820 7f80b9cf709c9cc09cd8a5e93cc53cf1 420 Gene3D G3DSA:3.50.50.60 2 55 1.3E-47 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS10820 7f80b9cf709c9cc09cd8a5e93cc53cf1 420 Gene3D G3DSA:3.40.50.720 78 106 1.9E-5 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS10820 7f80b9cf709c9cc09cd8a5e93cc53cf1 420 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 411 47.997 T 09-03-2017 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 BV404_RS10820 7f80b9cf709c9cc09cd8a5e93cc53cf1 420 Gene3D G3DSA:3.30.9.10 134 189 1.8E-14 T 09-03-2017 BV404_RS10820 7f80b9cf709c9cc09cd8a5e93cc53cf1 420 Gene3D G3DSA:3.30.9.10 270 359 1.8E-14 T 09-03-2017 BV404_RS10820 7f80b9cf709c9cc09cd8a5e93cc53cf1 420 SUPERFAMILY SSF54373 270 360 3.53E-18 T 09-03-2017 BV404_RS10820 7f80b9cf709c9cc09cd8a5e93cc53cf1 420 SUPERFAMILY SSF51905 1 54 1.28E-52 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS10820 7f80b9cf709c9cc09cd8a5e93cc53cf1 420 SUPERFAMILY SSF51905 360 416 1.28E-52 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS10820 7f80b9cf709c9cc09cd8a5e93cc53cf1 420 SUPERFAMILY SSF51905 107 270 1.28E-52 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS13255 11acec2d3cb111fcacbbb758d1302fec 497 Gene3D G3DSA:3.30.420.150 130 303 1.7E-50 T 09-03-2017 BV404_RS13255 11acec2d3cb111fcacbbb758d1302fec 497 Pfam PF02541 Ppx/GppA phosphatase family 23 302 1.4E-87 T 09-03-2017 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 BV404_RS13255 11acec2d3cb111fcacbbb758d1302fec 497 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 2 495 58.577 T 09-03-2017 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40 BV404_RS13255 11acec2d3cb111fcacbbb758d1302fec 497 SUPERFAMILY SSF53067 9 129 9.06E-36 T 09-03-2017 BV404_RS13255 11acec2d3cb111fcacbbb758d1302fec 497 Gene3D G3DSA:3.30.420.40 5 129 1.4E-42 T 09-03-2017 BV404_RS13255 11acec2d3cb111fcacbbb758d1302fec 497 SUPERFAMILY SSF109604 309 495 4.08E-40 T 09-03-2017 BV404_RS13255 11acec2d3cb111fcacbbb758d1302fec 497 SUPERFAMILY SSF53067 134 304 1.3E-42 T 09-03-2017 BV404_RS13255 11acec2d3cb111fcacbbb758d1302fec 497 PIRSF PIRSF001267 1 497 1.1E-179 T 09-03-2017 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 BV404_RS04260 999106e20a17a0ee7caf460bdd26bda1 77 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 2.0E-37 T 09-03-2017 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BV404_RS04260 999106e20a17a0ee7caf460bdd26bda1 77 Pfam PF00550 Phosphopantetheine attachment site 6 73 2.1E-16 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain BV404_RS04260 999106e20a17a0ee7caf460bdd26bda1 77 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 09-03-2017 IPR006162 Phosphopantetheine attachment site BV404_RS04260 999106e20a17a0ee7caf460bdd26bda1 77 SUPERFAMILY SSF47336 2 76 5.23E-24 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain BV404_RS04260 999106e20a17a0ee7caf460bdd26bda1 77 Gene3D G3DSA:1.10.1200.10 3 75 3.3E-35 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain BV404_RS04260 999106e20a17a0ee7caf460bdd26bda1 77 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.891 T 09-03-2017 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BV404_RS00615 5284042903d4fd27cbe806757af67baa 96 Gene3D G3DSA:2.30.33.40 1 96 9.6E-33 T 09-03-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BV404_RS00615 5284042903d4fd27cbe806757af67baa 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 8.1E-31 T 09-03-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BV404_RS00615 5284042903d4fd27cbe806757af67baa 96 SUPERFAMILY SSF50129 1 96 2.83E-31 T 09-03-2017 IPR011032 GroES-like BV404_RS00615 5284042903d4fd27cbe806757af67baa 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 24.641 T 09-03-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BV404_RS00615 5284042903d4fd27cbe806757af67baa 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 09-03-2017 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 BV404_RS00615 5284042903d4fd27cbe806757af67baa 96 PRINTS PR00297 10kDa chaperonin signature 25 46 1.2E-27 T 09-03-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BV404_RS00615 5284042903d4fd27cbe806757af67baa 96 PRINTS PR00297 10kDa chaperonin signature 3 18 1.2E-27 T 09-03-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BV404_RS00615 5284042903d4fd27cbe806757af67baa 96 PRINTS PR00297 10kDa chaperonin signature 82 95 1.2E-27 T 09-03-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BV404_RS00615 5284042903d4fd27cbe806757af67baa 96 PRINTS PR00297 10kDa chaperonin signature 60 72 1.2E-27 T 09-03-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BV404_RS00615 5284042903d4fd27cbe806757af67baa 96 SMART SM00883 2 95 2.2E-49 T 09-03-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BV404_RS01605 2c918361e9efc0af36ca080aaf5764b7 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 248 267 - T 09-03-2017 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 BV404_RS01605 2c918361e9efc0af36ca080aaf5764b7 363 SUPERFAMILY SSF53659 4 362 5.76E-124 T 09-03-2017 BV404_RS01605 2c918361e9efc0af36ca080aaf5764b7 363 Gene3D G3DSA:3.40.718.10 3 360 1.8E-134 T 09-03-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 BV404_RS01605 2c918361e9efc0af36ca080aaf5764b7 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 356 5.5E-137 T 09-03-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 BV404_RS01605 2c918361e9efc0af36ca080aaf5764b7 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 6 360 51.24 T 09-03-2017 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 BV404_RS01605 2c918361e9efc0af36ca080aaf5764b7 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 7 355 9.1E-165 T 09-03-2017 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 BV404_RS01605 2c918361e9efc0af36ca080aaf5764b7 363 SMART SM01329 7 356 1.1E-202 T 09-03-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 BV404_RS05190 024da9d7a96739791374aa8258dc0253 268 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 119 133 3.1E-31 T 09-03-2017 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BV404_RS05190 024da9d7a96739791374aa8258dc0253 268 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 62 70 3.1E-31 T 09-03-2017 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BV404_RS05190 024da9d7a96739791374aa8258dc0253 268 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 31 52 3.1E-31 T 09-03-2017 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BV404_RS05190 024da9d7a96739791374aa8258dc0253 268 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 88 105 3.1E-31 T 09-03-2017 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BV404_RS05190 024da9d7a96739791374aa8258dc0253 268 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 163 180 3.1E-31 T 09-03-2017 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BV404_RS05190 024da9d7a96739791374aa8258dc0253 268 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 18 25 3.1E-31 T 09-03-2017 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BV404_RS05190 024da9d7a96739791374aa8258dc0253 268 PIRSF PIRSF000513 5 263 1.1E-87 T 09-03-2017 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BV404_RS05190 024da9d7a96739791374aa8258dc0253 268 SUPERFAMILY SSF53613 6 259 7.95E-56 T 09-03-2017 IPR029056 Ribokinase-like BV404_RS05190 024da9d7a96739791374aa8258dc0253 268 Gene3D G3DSA:3.40.1190.20 9 261 6.1E-77 T 09-03-2017 IPR029056 Ribokinase-like BV404_RS05190 024da9d7a96739791374aa8258dc0253 268 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 12 255 28.527 T 09-03-2017 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BV404_RS05190 024da9d7a96739791374aa8258dc0253 268 Pfam PF02110 Hydroxyethylthiazole kinase family 12 251 8.0E-71 T 09-03-2017 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BV404_RS02515 3bb6ebc4b10bc6f3f03b0b92847f4a59 375 SUPERFAMILY SSF51735 91 237 2.76E-38 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS02515 3bb6ebc4b10bc6f3f03b0b92847f4a59 375 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 1.0E-40 T 09-03-2017 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 BV404_RS02515 3bb6ebc4b10bc6f3f03b0b92847f4a59 375 SUPERFAMILY SSF48600 3 87 9.89E-24 T 09-03-2017 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BV404_RS02515 3bb6ebc4b10bc6f3f03b0b92847f4a59 375 Gene3D G3DSA:1.20.59.10 4 83 5.8E-23 T 09-03-2017 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BV404_RS02515 3bb6ebc4b10bc6f3f03b0b92847f4a59 375 SMART SM00830 9 89 3.0E-29 T 09-03-2017 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BV404_RS02515 3bb6ebc4b10bc6f3f03b0b92847f4a59 375 Gene3D G3DSA:3.40.50.720 84 247 2.8E-47 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS02515 3bb6ebc4b10bc6f3f03b0b92847f4a59 375 SUPERFAMILY SSF48179 241 366 4.99E-41 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 BV404_RS02515 3bb6ebc4b10bc6f3f03b0b92847f4a59 375 PIRSF PIRSF001499 1 374 3.2E-178 T 09-03-2017 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 BV404_RS02515 3bb6ebc4b10bc6f3f03b0b92847f4a59 375 Gene3D G3DSA:1.10.3660.10 249 373 6.1E-54 T 09-03-2017 BV404_RS02515 3bb6ebc4b10bc6f3f03b0b92847f4a59 375 Pfam PF01817 Chorismate mutase type II 9 87 2.7E-21 T 09-03-2017 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BV404_RS02515 3bb6ebc4b10bc6f3f03b0b92847f4a59 375 Pfam PF02153 Prephenate dehydrogenase 134 344 2.5E-32 T 09-03-2017 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 BV404_RS08830 f61750e55af2584d50c1869f7ce443ec 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 2.2E-42 T 09-03-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 BV404_RS08830 f61750e55af2584d50c1869f7ce443ec 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 2.2E-42 T 09-03-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 BV404_RS08830 f61750e55af2584d50c1869f7ce443ec 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 2.2E-42 T 09-03-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 BV404_RS08830 f61750e55af2584d50c1869f7ce443ec 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 2.2E-42 T 09-03-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 BV404_RS08830 f61750e55af2584d50c1869f7ce443ec 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 2.2E-42 T 09-03-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 BV404_RS08830 f61750e55af2584d50c1869f7ce443ec 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 9.0E-63 T 09-03-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 BV404_RS08830 f61750e55af2584d50c1869f7ce443ec 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 155 3.1E-75 T 09-03-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 BV404_RS08830 f61750e55af2584d50c1869f7ce443ec 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 47.847 T 09-03-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 BV404_RS08830 f61750e55af2584d50c1869f7ce443ec 173 Gene3D G3DSA:3.30.420.10 3 156 1.2E-67 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 BV404_RS08830 f61750e55af2584d50c1869f7ce443ec 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 09-03-2017 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 BV404_RS08830 f61750e55af2584d50c1869f7ce443ec 173 SUPERFAMILY SSF53098 3 156 1.37E-55 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 BV404_RS10640 5c7f326813523fcf76e01e123136c1b4 41 SUPERFAMILY SSF57840 1 40 9.55E-14 T 09-03-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS10640 5c7f326813523fcf76e01e123136c1b4 41 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 09-03-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS10640 5c7f326813523fcf76e01e123136c1b4 41 Pfam PF00444 Ribosomal protein L36 1 40 4.7E-17 T 09-03-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS10640 5c7f326813523fcf76e01e123136c1b4 41 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 16.444 T 09-03-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS10640 5c7f326813523fcf76e01e123136c1b4 41 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 3.0E-8 T 09-03-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS08445 1dbdc221ac12a2e160afeae0bb072a63 318 SUPERFAMILY SSF55174 4 96 4.37E-12 T 09-03-2017 BV404_RS08445 1dbdc221ac12a2e160afeae0bb072a63 318 Pfam PF01479 S4 domain 4 42 6.2E-10 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 BV404_RS08445 1dbdc221ac12a2e160afeae0bb072a63 318 SUPERFAMILY SSF55120 68 236 6.17E-42 T 09-03-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 BV404_RS08445 1dbdc221ac12a2e160afeae0bb072a63 318 Pfam PF00849 RNA pseudouridylate synthase 68 206 7.7E-17 T 09-03-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BV404_RS08445 1dbdc221ac12a2e160afeae0bb072a63 318 SMART SM00363 3 73 3.8E-9 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 BV404_RS08445 1dbdc221ac12a2e160afeae0bb072a63 318 Gene3D G3DSA:3.10.290.10 3 62 1.3E-15 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 BV404_RS08445 1dbdc221ac12a2e160afeae0bb072a63 318 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 72 232 4.0E-55 T 09-03-2017 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 BV404_RS08445 1dbdc221ac12a2e160afeae0bb072a63 318 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 106 120 - T 09-03-2017 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 BV404_RS12470 a233a8706c73a68c4fbd57ccb7d354f8 323 Gene3D G3DSA:1.10.600.10 3 323 1.4E-102 T 09-03-2017 IPR008949 Isoprenoid synthase domain BV404_RS12470 a233a8706c73a68c4fbd57ccb7d354f8 323 SUPERFAMILY SSF48576 4 322 3.68E-102 T 09-03-2017 IPR008949 Isoprenoid synthase domain BV404_RS12470 a233a8706c73a68c4fbd57ccb7d354f8 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 09-03-2017 IPR000092 Polyprenyl synthetase GO:0008299 BV404_RS12470 a233a8706c73a68c4fbd57ccb7d354f8 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 09-03-2017 IPR000092 Polyprenyl synthetase GO:0008299 BV404_RS12470 a233a8706c73a68c4fbd57ccb7d354f8 323 Pfam PF00348 Polyprenyl synthetase 32 274 1.8E-72 T 09-03-2017 IPR000092 Polyprenyl synthetase GO:0008299 BV404_RS06240 be5868600d4967f36c7cad380ec525fd 219 SMART SM00448 1 112 1.7E-34 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS06240 be5868600d4967f36c7cad380ec525fd 219 Gene3D G3DSA:1.10.10.10 122 217 9.0E-29 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS06240 be5868600d4967f36c7cad380ec525fd 219 SUPERFAMILY SSF46894 119 217 9.35E-27 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BV404_RS06240 be5868600d4967f36c7cad380ec525fd 219 SUPERFAMILY SSF52172 1 118 1.71E-36 T 09-03-2017 IPR011006 CheY-like superfamily BV404_RS06240 be5868600d4967f36c7cad380ec525fd 219 Pfam PF00072 Response regulator receiver domain 3 113 3.7E-24 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS06240 be5868600d4967f36c7cad380ec525fd 219 SMART SM00862 145 216 6.7E-23 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BV404_RS06240 be5868600d4967f36c7cad380ec525fd 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 4.1E-22 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BV404_RS06240 be5868600d4967f36c7cad380ec525fd 219 Gene3D G3DSA:3.40.50.2300 1 120 5.5E-34 T 09-03-2017 BV404_RS00690 148936a4e09a46acd0552f06dd70a9b3 344 Gene3D G3DSA:1.10.1040.10 192 338 1.3E-58 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BV404_RS00690 148936a4e09a46acd0552f06dd70a9b3 344 SUPERFAMILY SSF48179 191 343 3.32E-56 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 BV404_RS00690 148936a4e09a46acd0552f06dd70a9b3 344 SUPERFAMILY SSF51735 15 190 6.04E-52 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS00690 148936a4e09a46acd0552f06dd70a9b3 344 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 14 334 37.669 T 09-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 BV404_RS00690 148936a4e09a46acd0552f06dd70a9b3 344 Gene3D G3DSA:3.40.50.720 17 190 2.5E-55 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS00690 148936a4e09a46acd0552f06dd70a9b3 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 68 95 2.3E-43 T 09-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 BV404_RS00690 148936a4e09a46acd0552f06dd70a9b3 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 144 164 2.3E-43 T 09-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 BV404_RS00690 148936a4e09a46acd0552f06dd70a9b3 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 185 209 2.3E-43 T 09-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 BV404_RS00690 148936a4e09a46acd0552f06dd70a9b3 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 210 234 2.3E-43 T 09-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 BV404_RS00690 148936a4e09a46acd0552f06dd70a9b3 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 18 35 2.3E-43 T 09-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 BV404_RS00690 148936a4e09a46acd0552f06dd70a9b3 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 250 267 2.3E-43 T 09-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 BV404_RS00690 148936a4e09a46acd0552f06dd70a9b3 344 PIRSF PIRSF000114 10 344 2.1E-99 T 09-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 BV404_RS00690 148936a4e09a46acd0552f06dd70a9b3 344 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 192 330 9.2E-52 T 09-03-2017 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 BV404_RS00690 148936a4e09a46acd0552f06dd70a9b3 344 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 16 171 2.5E-49 T 09-03-2017 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 BV404_RS00690 148936a4e09a46acd0552f06dd70a9b3 344 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 200 221 - T 09-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 BV404_RS07930 4cb61c4b65840df5c8215fa32b1339e4 150 SMART SM00871 2 148 1.1E-7 T 09-03-2017 IPR010499 Bacterial transcription activator, effector binding BV404_RS07930 4cb61c4b65840df5c8215fa32b1339e4 150 Pfam PF14526 Integron-associated effector binding protein 38 146 3.3E-15 T 09-03-2017 IPR029441 Integron-associated effector binding protein BV404_RS07930 4cb61c4b65840df5c8215fa32b1339e4 150 SUPERFAMILY SSF55136 50 139 2.38E-8 T 09-03-2017 IPR011256 Regulatory factor, effector binding domain BV404_RS07930 4cb61c4b65840df5c8215fa32b1339e4 150 Gene3D G3DSA:3.20.80.10 2 147 8.6E-41 T 09-03-2017 IPR011256 Regulatory factor, effector binding domain BV404_RS09680 4b1d91d6f4adbf91465e24b8d6978c91 159 Gene3D G3DSA:3.30.70.640 3 157 3.4E-70 T 09-03-2017 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 BV404_RS09680 4b1d91d6f4adbf91465e24b8d6978c91 159 Pfam PF01967 MoaC family 15 150 3.2E-56 T 09-03-2017 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 BV404_RS09680 4b1d91d6f4adbf91465e24b8d6978c91 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 2 158 35.818 T 09-03-2017 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type Reactome: R-HSA-947581 BV404_RS09680 4b1d91d6f4adbf91465e24b8d6978c91 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 1.6E-71 T 09-03-2017 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 Reactome: R-HSA-947581 BV404_RS09680 4b1d91d6f4adbf91465e24b8d6978c91 159 SUPERFAMILY SSF55040 11 155 1.57E-61 T 09-03-2017 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 BV404_RS13455 a61e633af61caee63d9f36f7bd9dd991 351 Gene3D G3DSA:3.40.50.300 107 223 3.4E-9 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS13455 a61e633af61caee63d9f36f7bd9dd991 351 Gene3D G3DSA:3.40.50.300 7 28 3.4E-9 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS13455 a61e633af61caee63d9f36f7bd9dd991 351 PIRSF PIRSF029407 1 345 4.1E-53 T 09-03-2017 IPR014556 Uncharacterised conserved protein UCP029407 BV404_RS13455 a61e633af61caee63d9f36f7bd9dd991 351 SUPERFAMILY SSF52540 91 210 2.78E-22 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS13455 a61e633af61caee63d9f36f7bd9dd991 351 SUPERFAMILY SSF52540 5 49 2.78E-22 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS00985 bbd349748825f5f1aa4154209b749be1 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 6.2E-59 T 09-03-2017 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 BV404_RS00985 bbd349748825f5f1aa4154209b749be1 123 SUPERFAMILY SSF50193 2 122 1.09E-51 T 09-03-2017 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 BV404_RS00985 bbd349748825f5f1aa4154209b749be1 123 Gene3D G3DSA:2.40.150.20 1 123 1.5E-55 T 09-03-2017 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 BV404_RS00985 bbd349748825f5f1aa4154209b749be1 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 4.9E-55 T 09-03-2017 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 BV404_RS00985 bbd349748825f5f1aa4154209b749be1 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 09-03-2017 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS00985 bbd349748825f5f1aa4154209b749be1 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 28.485 T 09-03-2017 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 BV404_RS00985 bbd349748825f5f1aa4154209b749be1 123 SMART SM01374 1 123 2.8E-86 T 09-03-2017 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 BV404_RS10725 c271fc46ade0171b1a2068dda009bce8 169 Pfam PF13633 Prokaryotic N-terminal methylation site 3 27 3.0E-7 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site BV404_RS10725 c271fc46ade0171b1a2068dda009bce8 169 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 25 2.0E-7 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site BV404_RS10725 c271fc46ade0171b1a2068dda009bce8 169 PIRSF PIRSF024622 1 169 9.9E-62 T 09-03-2017 IPR016824 Tfp pilus assembly protein FimT BV404_RS10725 c271fc46ade0171b1a2068dda009bce8 169 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 3 23 - T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site BV404_RS10725 c271fc46ade0171b1a2068dda009bce8 169 Pfam PF12019 Type II transport protein GspH 41 139 2.2E-9 T 09-03-2017 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 BV404_RS10725 c271fc46ade0171b1a2068dda009bce8 169 Gene3D G3DSA:3.30.700.10 5 51 7.8E-4 T 09-03-2017 BV404_RS10725 c271fc46ade0171b1a2068dda009bce8 169 SUPERFAMILY SSF54523 5 94 9.42E-13 T 09-03-2017 BV404_RS05690 da68f90e442a6cc884fce5336d472368 209 SUPERFAMILY SSF141734 12 122 9.15E-47 T 09-03-2017 BV404_RS05690 da68f90e442a6cc884fce5336d472368 209 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 121 208 1.2E-17 T 09-03-2017 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 BV404_RS05690 da68f90e442a6cc884fce5336d472368 209 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 36 108 4.6E-33 T 09-03-2017 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 BV404_RS05690 da68f90e442a6cc884fce5336d472368 209 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 11 209 37.966 T 09-03-2017 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 BV404_RS05690 da68f90e442a6cc884fce5336d472368 209 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 118 204 19.511 T 09-03-2017 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 BV404_RS05690 da68f90e442a6cc884fce5336d472368 209 SUPERFAMILY SSF101386 121 208 4.36E-25 T 09-03-2017 BV404_RS05690 da68f90e442a6cc884fce5336d472368 209 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 121 204 1.3E-31 T 09-03-2017 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 BV404_RS05690 da68f90e442a6cc884fce5336d472368 209 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 59 108 5.0E-22 T 09-03-2017 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 BV404_RS10700 be15aed512fa69df45b85da44c179f44 282 SUPERFAMILY SSF53474 3 280 7.85E-92 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold BV404_RS10700 be15aed512fa69df45b85da44c179f44 282 Pfam PF00756 Putative esterase 23 273 3.2E-60 T 09-03-2017 IPR000801 Putative esterase Reactome: R-HSA-156590 BV404_RS10700 be15aed512fa69df45b85da44c179f44 282 Gene3D G3DSA:3.40.50.1820 4 280 1.9E-75 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold BV404_RS10700 be15aed512fa69df45b85da44c179f44 282 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 6 279 1.3E-119 T 09-03-2017 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 BV404_RS01845 d2304500f3501c16d0e7626a6fd8d38c 418 SMART SM00304 89 141 1.0E-4 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 BV404_RS01845 d2304500f3501c16d0e7626a6fd8d38c 418 Pfam PF00672 HAMP domain 70 137 1.1E-8 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 BV404_RS01845 d2304500f3501c16d0e7626a6fd8d38c 418 SUPERFAMILY SSF58104 109 418 1.19E-75 T 09-03-2017 BV404_RS01845 d2304500f3501c16d0e7626a6fd8d38c 418 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 204 416 1.1E-48 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 BV404_RS01845 d2304500f3501c16d0e7626a6fd8d38c 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 254 281 5.0E-22 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 BV404_RS01845 d2304500f3501c16d0e7626a6fd8d38c 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 283 312 5.0E-22 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 BV404_RS01845 d2304500f3501c16d0e7626a6fd8d38c 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 68 88 5.0E-22 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 BV404_RS01845 d2304500f3501c16d0e7626a6fd8d38c 418 SMART SM00283 156 417 5.8E-74 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 BV404_RS01845 d2304500f3501c16d0e7626a6fd8d38c 418 Gene3D G3DSA:1.10.287.950 173 386 1.5E-59 T 09-03-2017 BV404_RS09600 c296b517d26962c18ac0f7e0bc451770 429 Gene3D G3DSA:2.40.160.60 26 429 8.9E-124 T 09-03-2017 BV404_RS09600 c296b517d26962c18ac0f7e0bc451770 429 SUPERFAMILY SSF56935 26 429 5.19E-98 T 09-03-2017 BV404_RS09600 c296b517d26962c18ac0f7e0bc451770 429 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 18 429 2.1E-126 T 09-03-2017 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) BV404_RS14410 f53aaf088a5a98d5d0e7481ecd2351e8 201 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 09-03-2017 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BV404_RS14410 f53aaf088a5a98d5d0e7481ecd2351e8 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 1.2E-11 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BV404_RS14410 f53aaf088a5a98d5d0e7481ecd2351e8 201 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 198 94.704 T 09-03-2017 IPR017757 Transcriptional repressor BetI BV404_RS14410 f53aaf088a5a98d5d0e7481ecd2351e8 201 Pfam PF13977 Bacterial transcriptional repressor 85 192 2.0E-31 T 09-03-2017 BV404_RS14410 f53aaf088a5a98d5d0e7481ecd2351e8 201 SUPERFAMILY SSF48498 86 192 7.83E-16 T 09-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal BV404_RS14410 f53aaf088a5a98d5d0e7481ecd2351e8 201 Gene3D G3DSA:1.10.357.10 1 194 1.1E-46 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 BV404_RS14410 f53aaf088a5a98d5d0e7481ecd2351e8 201 SUPERFAMILY SSF46689 5 80 2.67E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS14410 f53aaf088a5a98d5d0e7481ecd2351e8 201 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 2 192 4.2E-74 T 09-03-2017 IPR017757 Transcriptional repressor BetI BV404_RS03640 a083c25b5900f2c34f4df7c54b50b93c 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 12 256 5.3E-74 T 09-03-2017 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 BV404_RS03640 a083c25b5900f2c34f4df7c54b50b93c 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 5.3E-16 T 09-03-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BV404_RS03640 a083c25b5900f2c34f4df7c54b50b93c 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 5.3E-16 T 09-03-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BV404_RS03640 a083c25b5900f2c34f4df7c54b50b93c 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 5.3E-16 T 09-03-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BV404_RS03640 a083c25b5900f2c34f4df7c54b50b93c 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 5.3E-16 T 09-03-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BV404_RS03640 a083c25b5900f2c34f4df7c54b50b93c 260 Pfam PF01311 Bacterial export proteins, family 1 13 245 7.1E-57 T 09-03-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BV404_RS12925 98760c3f31a8140df75656813c6692d8 396 SMART SM00244 86 246 1.1E-50 T 09-03-2017 IPR001107 Band 7 domain BV404_RS12925 98760c3f31a8140df75656813c6692d8 396 Pfam PF01145 SPFH domain / Band 7 family 90 261 2.9E-31 T 09-03-2017 IPR001107 Band 7 domain BV404_RS12925 98760c3f31a8140df75656813c6692d8 396 PRINTS PR00721 Stomatin signature 93 115 8.1E-7 T 09-03-2017 IPR001972 Stomatin family GO:0016020 BV404_RS12925 98760c3f31a8140df75656813c6692d8 396 PRINTS PR00721 Stomatin signature 140 161 8.1E-7 T 09-03-2017 IPR001972 Stomatin family GO:0016020 BV404_RS12925 98760c3f31a8140df75656813c6692d8 396 PRINTS PR00721 Stomatin signature 196 219 8.1E-7 T 09-03-2017 IPR001972 Stomatin family GO:0016020 BV404_RS12925 98760c3f31a8140df75656813c6692d8 396 TIGRFAM TIGR01933 hflK: HflK protein 88 348 8.4E-124 T 09-03-2017 IPR010201 HflK GO:0016021 BV404_RS12925 98760c3f31a8140df75656813c6692d8 396 Pfam PF12221 Bacterial membrane protein N terminal 1 56 8.6E-15 T 09-03-2017 IPR020980 Menbrane protein HflK, N-terminal BV404_RS12925 98760c3f31a8140df75656813c6692d8 396 SUPERFAMILY SSF117892 119 251 1.96E-22 T 09-03-2017 IPR001107 Band 7 domain BV404_RS12270 0f0436defbc87b4f6e43cd8c9021dc97 187 Gene3D G3DSA:3.30.70.1300 42 130 2.7E-29 T 09-03-2017 BV404_RS12270 0f0436defbc87b4f6e43cd8c9021dc97 187 SUPERFAMILY SSF143456 1 187 3.79E-68 T 09-03-2017 BV404_RS12270 0f0436defbc87b4f6e43cd8c9021dc97 187 Pfam PF02622 Uncharacterized ACR, COG1678 12 174 7.4E-52 T 09-03-2017 IPR003774 Protein of unknown function UPF0301 BV404_RS12270 0f0436defbc87b4f6e43cd8c9021dc97 187 Gene3D G3DSA:3.40.1740.10 131 178 1.7E-38 T 09-03-2017 BV404_RS12270 0f0436defbc87b4f6e43cd8c9021dc97 187 Gene3D G3DSA:3.40.1740.10 2 40 1.7E-38 T 09-03-2017 BV404_RS12270 0f0436defbc87b4f6e43cd8c9021dc97 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 187 39.326 T 09-03-2017 IPR003774 Protein of unknown function UPF0301 BV404_RS06680 0eaadbc66227593babd3ed1f9300f7b6 1030 Gene3D G3DSA:2.70.98.10 743 1028 1.2E-92 T 09-03-2017 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 BV404_RS06680 0eaadbc66227593babd3ed1f9300f7b6 1030 Gene3D G3DSA:2.60.40.320 206 332 1.1E-34 T 09-03-2017 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 BV404_RS06680 0eaadbc66227593babd3ed1f9300f7b6 1030 SUPERFAMILY SSF51445 336 626 1.11E-98 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily BV404_RS06680 0eaadbc66227593babd3ed1f9300f7b6 1030 SUPERFAMILY SSF49303 218 332 8.92E-25 T 09-03-2017 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 BV404_RS06680 0eaadbc66227593babd3ed1f9300f7b6 1030 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 334 629 5.7E-110 T 09-03-2017 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 BV404_RS06680 0eaadbc66227593babd3ed1f9300f7b6 1030 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 49 216 3.0E-52 T 09-03-2017 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 BV404_RS06680 0eaadbc66227593babd3ed1f9300f7b6 1030 Pfam PF16353 Domain of unknown function(DUF4981) 642 729 9.7E-14 T 09-03-2017 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 BV404_RS06680 0eaadbc66227593babd3ed1f9300f7b6 1030 SUPERFAMILY SSF49303 624 731 6.23E-20 T 09-03-2017 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 BV404_RS06680 0eaadbc66227593babd3ed1f9300f7b6 1030 Gene3D G3DSA:2.60.40.320 630 730 3.0E-20 T 09-03-2017 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 BV404_RS06680 0eaadbc66227593babd3ed1f9300f7b6 1030 Gene3D G3DSA:2.60.120.260 7 205 4.5E-82 T 09-03-2017 IPR008979 Galactose-binding domain-like BV404_RS06680 0eaadbc66227593babd3ed1f9300f7b6 1030 Pfam PF02929 Beta galactosidase small chain 758 1027 2.6E-68 T 09-03-2017 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 BV404_RS06680 0eaadbc66227593babd3ed1f9300f7b6 1030 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 384 409 - T 09-03-2017 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 BV404_RS06680 0eaadbc66227593babd3ed1f9300f7b6 1030 Pfam PF00703 Glycosyl hydrolases family 2 218 332 2.7E-17 T 09-03-2017 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 BV404_RS06680 0eaadbc66227593babd3ed1f9300f7b6 1030 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 446 460 - T 09-03-2017 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 BV404_RS06680 0eaadbc66227593babd3ed1f9300f7b6 1030 SMART SM01038 755 1028 6.5E-109 T 09-03-2017 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 BV404_RS06680 0eaadbc66227593babd3ed1f9300f7b6 1030 Gene3D G3DSA:3.20.20.80 334 626 8.3E-112 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 BV404_RS06680 0eaadbc66227593babd3ed1f9300f7b6 1030 SUPERFAMILY SSF74650 744 1028 6.59E-91 T 09-03-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 BV404_RS06680 0eaadbc66227593babd3ed1f9300f7b6 1030 PRINTS PR00132 Glycosyl hydrolase family 2 signature 446 461 1.7E-38 T 09-03-2017 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 BV404_RS06680 0eaadbc66227593babd3ed1f9300f7b6 1030 PRINTS PR00132 Glycosyl hydrolase family 2 signature 374 392 1.7E-38 T 09-03-2017 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 BV404_RS06680 0eaadbc66227593babd3ed1f9300f7b6 1030 PRINTS PR00132 Glycosyl hydrolase family 2 signature 144 159 1.7E-38 T 09-03-2017 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 BV404_RS06680 0eaadbc66227593babd3ed1f9300f7b6 1030 PRINTS PR00132 Glycosyl hydrolase family 2 signature 534 549 1.7E-38 T 09-03-2017 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 BV404_RS06680 0eaadbc66227593babd3ed1f9300f7b6 1030 PRINTS PR00132 Glycosyl hydrolase family 2 signature 343 357 1.7E-38 T 09-03-2017 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 BV404_RS06680 0eaadbc66227593babd3ed1f9300f7b6 1030 SUPERFAMILY SSF49785 13 216 3.54E-65 T 09-03-2017 IPR008979 Galactose-binding domain-like BV404_RS02205 1a07ec7d0fe0f1bef4708279bf1e4be5 157 PIRSF PIRSF006092 1 157 1.1E-46 T 09-03-2017 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 BV404_RS02205 1a07ec7d0fe0f1bef4708279bf1e4be5 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 156 1.5E-27 T 09-03-2017 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 BV404_RS02205 1a07ec7d0fe0f1bef4708279bf1e4be5 157 Pfam PF03449 Transcription elongation factor, N-terminal 4 73 2.1E-24 T 09-03-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 BV404_RS02205 1a07ec7d0fe0f1bef4708279bf1e4be5 157 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 47 - T 09-03-2017 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 BV404_RS02205 1a07ec7d0fe0f1bef4708279bf1e4be5 157 Gene3D G3DSA:3.10.50.30 80 156 1.0E-31 T 09-03-2017 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 BV404_RS02205 1a07ec7d0fe0f1bef4708279bf1e4be5 157 SUPERFAMILY SSF46557 2 75 7.32E-25 T 09-03-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 BV404_RS02205 1a07ec7d0fe0f1bef4708279bf1e4be5 157 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 31.817 T 09-03-2017 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 BV404_RS02205 1a07ec7d0fe0f1bef4708279bf1e4be5 157 SUPERFAMILY SSF54534 81 156 1.06E-23 T 09-03-2017 BV404_RS02205 1a07ec7d0fe0f1bef4708279bf1e4be5 157 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 09-03-2017 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 BV404_RS02205 1a07ec7d0fe0f1bef4708279bf1e4be5 157 Gene3D G3DSA:1.10.287.180 1 74 3.8E-28 T 09-03-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 BV404_RS02205 1a07ec7d0fe0f1bef4708279bf1e4be5 157 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 154 4.7E-53 T 09-03-2017 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 BV404_RS09445 08e8583322f033913af5fe5c62fb7514 642 SUPERFAMILY SSF52540 14 235 1.27E-24 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09445 08e8583322f033913af5fe5c62fb7514 642 SUPERFAMILY SSF52540 42 89 4.67E-12 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09445 08e8583322f033913af5fe5c62fb7514 642 SUPERFAMILY SSF52540 480 545 4.67E-12 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09445 08e8583322f033913af5fe5c62fb7514 642 SUPERFAMILY SSF52540 576 603 4.67E-12 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09445 08e8583322f033913af5fe5c62fb7514 642 Pfam PF04851 Type III restriction enzyme, res subunit 19 235 4.9E-5 T 09-03-2017 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 BV404_RS09445 08e8583322f033913af5fe5c62fb7514 642 Pfam PF13307 Helicase C-terminal domain 462 619 1.9E-35 T 09-03-2017 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 BV404_RS09445 08e8583322f033913af5fe5c62fb7514 642 SMART SM00487 17 312 0.0065 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain BV404_RS09445 08e8583322f033913af5fe5c62fb7514 642 Gene3D G3DSA:3.40.50.300 193 253 8.1E-19 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09445 08e8583322f033913af5fe5c62fb7514 642 Gene3D G3DSA:3.40.50.300 30 117 8.1E-19 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09445 08e8583322f033913af5fe5c62fb7514 642 Gene3D G3DSA:3.40.50.300 452 602 6.6E-7 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09445 08e8583322f033913af5fe5c62fb7514 642 SMART SM00491 477 606 1.8E-45 T 09-03-2017 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 BV404_RS20320 0becfe3cc8a7ae3ee1028f45ce077414 129 Pfam PF02353 Mycolic acid cyclopropane synthetase 70 126 6.2E-16 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS20320 0becfe3cc8a7ae3ee1028f45ce077414 129 SUPERFAMILY SSF53335 2 129 5.98E-29 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS20320 0becfe3cc8a7ae3ee1028f45ce077414 129 Gene3D G3DSA:3.40.50.150 66 128 1.6E-18 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS03655 4ce59bee49b77056780448f56b9013ee 310 Pfam PF05175 Methyltransferase small domain 134 216 2.0E-18 T 09-03-2017 IPR007848 Methyltransferase small domain GO:0008168 BV404_RS03655 4ce59bee49b77056780448f56b9013ee 310 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 69 265 2.3E-60 T 09-03-2017 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 BV404_RS03655 4ce59bee49b77056780448f56b9013ee 310 Gene3D G3DSA:3.40.50.150 108 289 1.5E-54 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS03655 4ce59bee49b77056780448f56b9013ee 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 09-03-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BV404_RS03655 4ce59bee49b77056780448f56b9013ee 310 Gene3D G3DSA:1.10.8.10 15 106 7.6E-7 T 09-03-2017 BV404_RS03655 4ce59bee49b77056780448f56b9013ee 310 PIRSF PIRSF037167 2 307 2.2E-150 T 09-03-2017 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 BV404_RS03655 4ce59bee49b77056780448f56b9013ee 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 302 2.6E-98 T 09-03-2017 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 BV404_RS03655 4ce59bee49b77056780448f56b9013ee 310 SUPERFAMILY SSF53335 16 293 1.81E-51 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS03655 4ce59bee49b77056780448f56b9013ee 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 7.1E-139 T 09-03-2017 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 BV404_RS03655 4ce59bee49b77056780448f56b9013ee 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 54.289 T 09-03-2017 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 BV404_RS06070 7cf17321b7e891ec81980ce51c7a3f25 231 Pfam PF00849 RNA pseudouridylate synthase 10 153 8.9E-28 T 09-03-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BV404_RS06070 7cf17321b7e891ec81980ce51c7a3f25 231 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 47 61 - T 09-03-2017 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 BV404_RS06070 7cf17321b7e891ec81980ce51c7a3f25 231 TIGRFAM TIGR01621 RluA-like: pseudouridine synthase Rlu family protein, TIGR01621 1 220 3.0E-106 T 09-03-2017 IPR006508 Pseudouridine synthase, RluA-like BV404_RS06070 7cf17321b7e891ec81980ce51c7a3f25 231 SUPERFAMILY SSF55120 2 193 3.2E-46 T 09-03-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 BV404_RS02395 3874c57f99e1eb2917ffc02dc1f227d0 172 Gene3D G3DSA:3.90.79.10 5 151 4.9E-32 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 BV404_RS02395 3874c57f99e1eb2917ffc02dc1f227d0 172 Pfam PF00293 NUDIX domain 7 145 1.6E-26 T 09-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 BV404_RS02395 3874c57f99e1eb2917ffc02dc1f227d0 172 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.446 T 09-03-2017 IPR022927 RNA pyrophosphohydrolase RppH BV404_RS02395 3874c57f99e1eb2917ffc02dc1f227d0 172 PRINTS PR00502 NUDIX hydrolase family signature 47 62 6.1E-8 T 09-03-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 BV404_RS02395 3874c57f99e1eb2917ffc02dc1f227d0 172 PRINTS PR00502 NUDIX hydrolase family signature 33 47 6.1E-8 T 09-03-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 BV404_RS02395 3874c57f99e1eb2917ffc02dc1f227d0 172 SUPERFAMILY SSF55811 6 152 4.33E-32 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 BV404_RS02395 3874c57f99e1eb2917ffc02dc1f227d0 172 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 09-03-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 BV404_RS03195 67dd13eb30554d12d498c6ce0efe03ba 434 SUPERFAMILY SSF117143 78 395 2.09E-69 T 09-03-2017 BV404_RS03195 67dd13eb30554d12d498c6ce0efe03ba 434 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 2 416 3.1E-94 T 09-03-2017 IPR020013 Fagellar hook-basal body protein, FlgE/F/G BV404_RS03195 67dd13eb30554d12d498c6ce0efe03ba 434 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 355 433 1.5E-15 T 09-03-2017 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BV404_RS03195 67dd13eb30554d12d498c6ce0efe03ba 434 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 8 28 - T 09-03-2017 IPR019776 Flagellar basal body rod protein, conserved site BV404_RS03195 67dd13eb30554d12d498c6ce0efe03ba 434 Pfam PF00460 Flagella basal body rod protein 3 32 7.2E-10 T 09-03-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BV404_RS03195 67dd13eb30554d12d498c6ce0efe03ba 434 Pfam PF07559 Flagellar basal body protein FlaE 181 314 7.9E-21 T 09-03-2017 IPR011491 Flagellar hook protein FlgE BV404_RS07105 c9716fadf3d8a32fa39d4dc620f6dda8 378 SUPERFAMILY SSF50331 250 364 3.29E-9 T 09-03-2017 IPR008995 Molybdate/tungstate binding, C-terminal BV404_RS07105 c9716fadf3d8a32fa39d4dc620f6dda8 378 SUPERFAMILY SSF52540 18 255 1.23E-87 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS07105 c9716fadf3d8a32fa39d4dc620f6dda8 378 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 48 372 2.2E-156 T 09-03-2017 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 BV404_RS07105 c9716fadf3d8a32fa39d4dc620f6dda8 378 Pfam PF08402 TOBE domain 292 372 1.2E-10 T 09-03-2017 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 BV404_RS07105 c9716fadf3d8a32fa39d4dc620f6dda8 378 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS07105 c9716fadf3d8a32fa39d4dc620f6dda8 378 SMART SM00382 42 225 7.2E-20 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS07105 c9716fadf3d8a32fa39d4dc620f6dda8 378 Pfam PF00005 ABC transporter 35 174 2.6E-35 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS07105 c9716fadf3d8a32fa39d4dc620f6dda8 378 Gene3D G3DSA:3.40.50.300 15 248 5.1E-82 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS14595 d1ae22fe6dfe5dff41cd68e93d97cb7f 221 Gene3D G3DSA:3.40.50.300 7 198 5.2E-40 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS14595 d1ae22fe6dfe5dff41cd68e93d97cb7f 221 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 15 198 26.768 T 09-03-2017 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 BV404_RS14595 d1ae22fe6dfe5dff41cd68e93d97cb7f 221 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 11 194 5.6E-71 T 09-03-2017 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 BV404_RS14595 d1ae22fe6dfe5dff41cd68e93d97cb7f 221 Pfam PF01926 50S ribosome-binding GTPase 29 147 3.4E-19 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 BV404_RS14595 d1ae22fe6dfe5dff41cd68e93d97cb7f 221 SUPERFAMILY SSF52540 16 199 4.25E-33 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS10245 0d20a9f7336bce0e72e95fea35a85b93 259 SMART SM00420 6 58 3.1E-11 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BV404_RS10245 0d20a9f7336bce0e72e95fea35a85b93 259 Gene3D G3DSA:1.10.10.10 1 86 7.1E-11 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS10245 0d20a9f7336bce0e72e95fea35a85b93 259 SUPERFAMILY SSF46785 3 61 6.44E-12 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS10245 0d20a9f7336bce0e72e95fea35a85b93 259 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 2.1E-14 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BV404_RS10245 0d20a9f7336bce0e72e95fea35a85b93 259 SMART SM01134 79 240 4.9E-67 T 09-03-2017 BV404_RS10245 0d20a9f7336bce0e72e95fea35a85b93 259 Pfam PF00455 DeoR C terminal sensor domain 81 239 4.0E-49 T 09-03-2017 IPR014036 DeoR C-terminal sensor domain BV404_RS10245 0d20a9f7336bce0e72e95fea35a85b93 259 SUPERFAMILY SSF100950 81 240 5.93E-33 T 09-03-2017 BV404_RS10245 0d20a9f7336bce0e72e95fea35a85b93 259 Gene3D G3DSA:3.40.50.1360 87 234 1.9E-16 T 09-03-2017 BV404_RS04205 addaad15ae24c9bf3ccc72807eb83b3a 519 SUPERFAMILY SSF52091 415 498 5.1E-11 T 09-03-2017 IPR002645 STAS domain BV404_RS04205 addaad15ae24c9bf3ccc72807eb83b3a 519 Pfam PF00916 Sulfate permease family 13 374 2.6E-55 T 09-03-2017 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 BV404_RS04205 addaad15ae24c9bf3ccc72807eb83b3a 519 Pfam PF01740 STAS domain 416 503 3.4E-7 T 09-03-2017 IPR002645 STAS domain BV404_RS04205 addaad15ae24c9bf3ccc72807eb83b3a 519 SUPERFAMILY SSF81665 120 197 7.06E-5 T 09-03-2017 BV404_RS04205 addaad15ae24c9bf3ccc72807eb83b3a 519 SUPERFAMILY SSF81665 309 401 7.06E-5 T 09-03-2017 BV404_RS04205 addaad15ae24c9bf3ccc72807eb83b3a 519 Gene3D G3DSA:3.30.750.24 414 506 4.1E-10 T 09-03-2017 IPR002645 STAS domain BV404_RS07330 11de3d4f91a6fa086adeeae6644278cf 1027 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 76 1027 0.0 T 09-03-2017 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 BV404_RS07330 11de3d4f91a6fa086adeeae6644278cf 1027 Gene3D G3DSA:3.40.192.10 800 913 5.1E-4 T 09-03-2017 BV404_RS07330 11de3d4f91a6fa086adeeae6644278cf 1027 Gene3D G3DSA:3.40.50.720 942 1020 8.9E-13 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS07330 11de3d4f91a6fa086adeeae6644278cf 1027 SUPERFAMILY SSF53223 754 940 1.25E-25 T 09-03-2017 BV404_RS05710 80f2da64a84b79b771b4b7a507fe5ca7 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 23 102 5.1E-33 T 09-03-2017 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 BV404_RS05710 80f2da64a84b79b771b4b7a507fe5ca7 106 SUPERFAMILY SSF54736 22 105 1.05E-31 T 09-03-2017 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like BV404_RS05710 80f2da64a84b79b771b4b7a507fe5ca7 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 12 101 27.719 T 09-03-2017 IPR022935 ATP-dependent Clp protease adaptor protein ClpS BV404_RS05710 80f2da64a84b79b771b4b7a507fe5ca7 106 Gene3D G3DSA:3.30.1390.10 4 106 1.1E-43 T 09-03-2017 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like BV404_RS05110 6e30f8cb4e3df0d76133eb4c7e2b913d 356 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 9 345 1.1E-134 T 09-03-2017 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 BV404_RS05110 6e30f8cb4e3df0d76133eb4c7e2b913d 356 Pfam PF00793 DAHP synthetase I family 41 336 9.4E-87 T 09-03-2017 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 BV404_RS05110 6e30f8cb4e3df0d76133eb4c7e2b913d 356 SUPERFAMILY SSF51569 9 344 4.81E-119 T 09-03-2017 BV404_RS05110 6e30f8cb4e3df0d76133eb4c7e2b913d 356 Gene3D G3DSA:3.20.20.70 11 346 2.8E-132 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS05110 6e30f8cb4e3df0d76133eb4c7e2b913d 356 PIRSF PIRSF001361 1 351 1.1E-144 T 09-03-2017 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 BV404_RS10755 5a395637e44e9fed1a4febcbab21f961 294 Gene3D G3DSA:2.60.200.30 152 262 2.6E-41 T 09-03-2017 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 BV404_RS10755 5a395637e44e9fed1a4febcbab21f961 294 Pfam PF01513 ATP-NAD kinase 8 273 5.2E-68 T 09-03-2017 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 BV404_RS10755 5a395637e44e9fed1a4febcbab21f961 294 Gene3D G3DSA:3.40.50.10330 4 151 7.3E-38 T 09-03-2017 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 BV404_RS10755 5a395637e44e9fed1a4febcbab21f961 294 SUPERFAMILY SSF111331 8 290 4.97E-92 T 09-03-2017 IPR016064 NAD kinase/diacylglycerol kinase-like domain BV404_RS10755 5a395637e44e9fed1a4febcbab21f961 294 Hamap MF_00361 NAD kinase [nadK]. 6 289 33.341 T 09-03-2017 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 BV404_RS12220 a33974ea3cb7706bf0aa1df529e13dab 341 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 164 320 1.1E-55 T 09-03-2017 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS12220 a33974ea3cb7706bf0aa1df529e13dab 341 SUPERFAMILY SSF55347 159 321 1.99E-58 T 09-03-2017 BV404_RS12220 a33974ea3cb7706bf0aa1df529e13dab 341 Gene3D G3DSA:3.40.50.720 1 167 1.9E-64 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS12220 a33974ea3cb7706bf0aa1df529e13dab 341 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 3 332 1.2E-189 T 09-03-2017 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 BV404_RS12220 a33974ea3cb7706bf0aa1df529e13dab 341 PIRSF PIRSF000149 1 341 5.8E-126 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS12220 a33974ea3cb7706bf0aa1df529e13dab 341 SUPERFAMILY SSF51735 2 185 2.25E-51 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS12220 a33974ea3cb7706bf0aa1df529e13dab 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 116 129 7.8E-31 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS12220 a33974ea3cb7706bf0aa1df529e13dab 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 180 196 7.8E-31 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS12220 a33974ea3cb7706bf0aa1df529e13dab 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 236 253 7.8E-31 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS12220 a33974ea3cb7706bf0aa1df529e13dab 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 153 171 7.8E-31 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS12220 a33974ea3cb7706bf0aa1df529e13dab 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 276 291 7.8E-31 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS12220 a33974ea3cb7706bf0aa1df529e13dab 341 Gene3D G3DSA:3.30.360.10 168 322 1.1E-61 T 09-03-2017 BV404_RS12220 a33974ea3cb7706bf0aa1df529e13dab 341 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 159 9.2E-49 T 09-03-2017 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS12220 a33974ea3cb7706bf0aa1df529e13dab 341 SMART SM00846 2 159 2.5E-74 T 09-03-2017 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS12220 a33974ea3cb7706bf0aa1df529e13dab 341 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 1 341 65.984 T 09-03-2017 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 BV404_RS06295 dc15e77cd14bd193bbfa55b9c310e69b 382 Pfam PF06965 Na+/H+ antiporter 1 7 373 1.1E-143 T 09-03-2017 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 BV404_RS06295 dc15e77cd14bd193bbfa55b9c310e69b 382 Gene3D G3DSA:1.20.1530.10 4 378 2.3E-150 T 09-03-2017 IPR023171 Na/H antiporter domain BV404_RS06295 dc15e77cd14bd193bbfa55b9c310e69b 382 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 8 373 3.2E-183 T 09-03-2017 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 BV404_RS06295 dc15e77cd14bd193bbfa55b9c310e69b 382 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 379 23.387 T 09-03-2017 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 BV404_RS02550 204c98185628ea662bf1294ecb4148f7 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 158 177 8.5E-15 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BV404_RS02550 204c98185628ea662bf1294ecb4148f7 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 288 314 8.5E-15 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BV404_RS02550 204c98185628ea662bf1294ecb4148f7 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 27 43 8.5E-15 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BV404_RS02550 204c98185628ea662bf1294ecb4148f7 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 243 262 8.5E-15 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BV404_RS02550 204c98185628ea662bf1294ecb4148f7 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 113 129 8.5E-15 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BV404_RS02550 204c98185628ea662bf1294ecb4148f7 348 Gene3D G3DSA:3.40.190.10 23 136 1.4E-9 T 09-03-2017 BV404_RS02550 204c98185628ea662bf1294ecb4148f7 348 Gene3D G3DSA:3.40.190.10 137 292 1.1E-26 T 09-03-2017 BV404_RS02550 204c98185628ea662bf1294ecb4148f7 348 SUPERFAMILY SSF53850 23 341 2.38E-50 T 09-03-2017 BV404_RS02550 204c98185628ea662bf1294ecb4148f7 348 Pfam PF13416 Bacterial extracellular solute-binding protein 38 302 2.3E-18 T 09-03-2017 BV404_RS00775 a7f29f971c20ae30a39bcaef3c400c06 578 PRINTS PR00811 Bacterial general secretion pathway protein D signature 319 329 2.9E-19 T 09-03-2017 IPR001775 GspD/PilQ family BV404_RS00775 a7f29f971c20ae30a39bcaef3c400c06 578 PRINTS PR00811 Bacterial general secretion pathway protein D signature 564 578 2.9E-19 T 09-03-2017 IPR001775 GspD/PilQ family BV404_RS00775 a7f29f971c20ae30a39bcaef3c400c06 578 PRINTS PR00811 Bacterial general secretion pathway protein D signature 449 459 2.9E-19 T 09-03-2017 IPR001775 GspD/PilQ family BV404_RS00775 a7f29f971c20ae30a39bcaef3c400c06 578 PRINTS PR00811 Bacterial general secretion pathway protein D signature 414 438 2.9E-19 T 09-03-2017 IPR001775 GspD/PilQ family BV404_RS00775 a7f29f971c20ae30a39bcaef3c400c06 578 PRINTS PR00811 Bacterial general secretion pathway protein D signature 541 559 2.9E-19 T 09-03-2017 IPR001775 GspD/PilQ family BV404_RS00775 a7f29f971c20ae30a39bcaef3c400c06 578 Pfam PF00263 Bacterial type II and III secretion system protein 418 576 9.4E-46 T 09-03-2017 IPR004846 Type II/III secretion system GO:0009306 BV404_RS00775 a7f29f971c20ae30a39bcaef3c400c06 578 Pfam PF07660 Secretin and TonB N terminus short domain 180 228 4.6E-7 T 09-03-2017 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 BV404_RS00775 a7f29f971c20ae30a39bcaef3c400c06 578 SMART SM00965 180 228 1.7E-9 T 09-03-2017 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 BV404_RS00775 a7f29f971c20ae30a39bcaef3c400c06 578 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 155 576 3.8E-162 T 09-03-2017 IPR013355 Type IV pilus secretin PilQ GO:0009297|GO:0009306 BV404_RS00775 a7f29f971c20ae30a39bcaef3c400c06 578 Pfam PF03958 Bacterial type II/III secretion system short domain 258 319 1.6E-10 T 09-03-2017 IPR005644 NolW-like BV404_RS00775 a7f29f971c20ae30a39bcaef3c400c06 578 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 522 555 - T 09-03-2017 IPR004845 Type II secretion system GspD, conserved site GO:0008565 BV404_RS01820 ece073a7b6236503cd28ee65adef7876 202 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 23 201 6.6E-51 T 09-03-2017 IPR016476 SH3 domain protein BV404_RS01820 ece073a7b6236503cd28ee65adef7876 202 PIRSF PIRSF006158 1 202 1.7E-68 T 09-03-2017 IPR016476 SH3 domain protein BV404_RS01820 ece073a7b6236503cd28ee65adef7876 202 Pfam PF08239 Bacterial SH3 domain 31 81 8.8E-10 T 09-03-2017 IPR003646 SH3-like domain, bacterial-type BV404_RS01820 ece073a7b6236503cd28ee65adef7876 202 SMART SM00287 19 85 1.4E-10 T 09-03-2017 IPR003646 SH3-like domain, bacterial-type BV404_RS03590 1174fd64f7b2628b90c793fdcf011cb2 267 PRINTS PR01003 Flagellar assembly protein FliH signature 217 233 2.8E-7 T 09-03-2017 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 BV404_RS03590 1174fd64f7b2628b90c793fdcf011cb2 267 PRINTS PR01003 Flagellar assembly protein FliH signature 147 164 2.8E-7 T 09-03-2017 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 BV404_RS03590 1174fd64f7b2628b90c793fdcf011cb2 267 PRINTS PR01003 Flagellar assembly protein FliH signature 85 107 2.8E-7 T 09-03-2017 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 BV404_RS03590 1174fd64f7b2628b90c793fdcf011cb2 267 PRINTS PR01003 Flagellar assembly protein FliH signature 108 126 2.8E-7 T 09-03-2017 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 BV404_RS03590 1174fd64f7b2628b90c793fdcf011cb2 267 Pfam PF02108 Flagellar assembly protein FliH 126 251 1.4E-33 T 09-03-2017 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE BV404_RS09720 a9dc9cc9f86745fa0fca6fbd7b866a7b 195 Pfam PF13356 Domain of unknown function (DUF4102) 8 93 7.9E-19 T 09-03-2017 IPR025166 Domain of unknown function DUF4102 BV404_RS09720 a9dc9cc9f86745fa0fca6fbd7b866a7b 195 SUPERFAMILY SSF56349 106 195 8.36E-15 T 09-03-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BV404_RS09720 a9dc9cc9f86745fa0fca6fbd7b866a7b 195 Gene3D G3DSA:1.10.150.130 106 195 3.3E-15 T 09-03-2017 IPR023109 Integrase/recombinase, N-terminal BV404_RS09720 a9dc9cc9f86745fa0fca6fbd7b866a7b 195 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 106 157 2.2E-9 T 09-03-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 BV404_RS11695 fcbf6c1fff31a88e72db943b9a9570f3 105 Hamap MF_00910 Cell division protein FtsL [ftsL]. 19 102 16.546 T 09-03-2017 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 BV404_RS11695 fcbf6c1fff31a88e72db943b9a9570f3 105 Pfam PF04999 Cell division protein FtsL 8 103 5.0E-37 T 09-03-2017 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 BV404_RS11695 fcbf6c1fff31a88e72db943b9a9570f3 105 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 20 102 4.8E-28 T 09-03-2017 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 BV404_RS09920 4ab8c6db61cb28f7c6a34777634c912e 494 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 147 159 - T 09-03-2017 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 BV404_RS09920 4ab8c6db61cb28f7c6a34777634c912e 494 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 6 480 3.0E-132 T 09-03-2017 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 BV404_RS09920 4ab8c6db61cb28f7c6a34777634c912e 494 Pfam PF00854 POT family 79 441 4.3E-81 T 09-03-2017 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 BV404_RS09920 4ab8c6db61cb28f7c6a34777634c912e 494 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 67 91 - T 09-03-2017 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 BV404_RS09920 4ab8c6db61cb28f7c6a34777634c912e 494 SUPERFAMILY SSF103473 3 195 5.49E-19 T 09-03-2017 IPR020846 Major facilitator superfamily domain BV404_RS09920 4ab8c6db61cb28f7c6a34777634c912e 494 SUPERFAMILY SSF103473 193 479 1.15E-11 T 09-03-2017 IPR020846 Major facilitator superfamily domain BV404_RS09920 4ab8c6db61cb28f7c6a34777634c912e 494 Gene3D G3DSA:1.20.1250.20 11 194 2.2E-17 T 09-03-2017 BV404_RS09920 4ab8c6db61cb28f7c6a34777634c912e 494 Gene3D G3DSA:1.20.1250.20 269 472 1.3E-6 T 09-03-2017 BV404_RS03885 67b7a11c9d90655678ff95ecaedac5c7 155 SMART SM00855 2 117 7.6E-6 T 09-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 BV404_RS03885 67b7a11c9d90655678ff95ecaedac5c7 155 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 79 2.2E-8 T 09-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 BV404_RS03885 67b7a11c9d90655678ff95ecaedac5c7 155 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 155 4.5E-37 T 09-03-2017 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0008969 BV404_RS03885 67b7a11c9d90655678ff95ecaedac5c7 155 SUPERFAMILY SSF53254 1 145 8.99E-21 T 09-03-2017 IPR029033 Histidine phosphatase superfamily BV404_RS03885 67b7a11c9d90655678ff95ecaedac5c7 155 Gene3D G3DSA:3.40.50.1240 1 155 1.7E-36 T 09-03-2017 IPR029033 Histidine phosphatase superfamily BV404_RS04845 fc2e2284f4c4d46481bbd36977386c74 226 Pfam PF06912 Protein of unknown function (DUF1275) 8 214 4.1E-27 T 09-03-2017 IPR010699 Protein of unknown function DUF1275 BV404_RS08390 ae48c76061b016757db7acdf74b2a272 252 Gene3D G3DSA:3.30.450.40 83 251 1.4E-42 T 09-03-2017 IPR029016 GAF domain-like BV404_RS08390 ae48c76061b016757db7acdf74b2a272 252 Gene3D G3DSA:1.10.10.10 10 82 8.8E-8 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS08390 ae48c76061b016757db7acdf74b2a272 252 SUPERFAMILY SSF46785 11 81 1.88E-5 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS08390 ae48c76061b016757db7acdf74b2a272 252 SUPERFAMILY SSF55781 87 251 4.91E-41 T 09-03-2017 IPR029016 GAF domain-like BV404_RS08390 ae48c76061b016757db7acdf74b2a272 252 Pfam PF01614 Bacterial transcriptional regulator 130 247 3.9E-19 T 09-03-2017 IPR014757 Transcription regulator IclR, C-terminal BV404_RS05665 f44ba84112054beadc55304207976a6a 346 Gene3D G3DSA:3.40.640.10 41 253 2.6E-73 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 BV404_RS05665 f44ba84112054beadc55304207976a6a 346 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 345 54.351 T 09-03-2017 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 BV404_RS05665 f44ba84112054beadc55304207976a6a 346 Pfam PF00155 Aminotransferase class I and II 42 339 1.2E-56 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BV404_RS05665 f44ba84112054beadc55304207976a6a 346 SUPERFAMILY SSF53383 10 344 3.58E-76 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase BV404_RS05665 f44ba84112054beadc55304207976a6a 346 Gene3D G3DSA:3.90.1150.10 259 344 2.1E-12 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 BV404_RS05665 f44ba84112054beadc55304207976a6a 346 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 6 343 2.4E-121 T 09-03-2017 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 BV404_RS05665 f44ba84112054beadc55304207976a6a 346 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 206 215 - T 09-03-2017 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 BV404_RS06545 a3d1aa7666108653ba7291656d85fc50 121 SUPERFAMILY SSF55620 1 118 1.5E-40 T 09-03-2017 BV404_RS06545 a3d1aa7666108653ba7291656d85fc50 121 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 4 119 6.8E-35 T 09-03-2017 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 BV404_RS06545 a3d1aa7666108653ba7291656d85fc50 121 PIRSF PIRSF006113 1 120 1.4E-52 T 09-03-2017 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 BV404_RS06545 a3d1aa7666108653ba7291656d85fc50 121 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 4 96 1.0E-32 T 09-03-2017 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 BV404_RS06545 a3d1aa7666108653ba7291656d85fc50 121 Gene3D G3DSA:3.30.479.10 1 119 3.0E-40 T 09-03-2017 BV404_RS06635 6a2040435c724f691a6edc4596aa3dd5 292 Pfam PF00892 EamA-like transporter family 146 276 1.4E-15 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 BV404_RS06635 6a2040435c724f691a6edc4596aa3dd5 292 SUPERFAMILY SSF103481 185 277 1.06E-9 T 09-03-2017 BV404_RS06635 6a2040435c724f691a6edc4596aa3dd5 292 SUPERFAMILY SSF103481 45 134 3.14E-6 T 09-03-2017 BV404_RS02010 9310c7a336ea4eec270952b9f78b4cb6 264 Gene3D G3DSA:3.20.20.60 1 262 1.7E-111 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 BV404_RS02010 9310c7a336ea4eec270952b9f78b4cb6 264 SUPERFAMILY SSF51621 3 262 5.5E-106 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 BV404_RS02010 9310c7a336ea4eec270952b9f78b4cb6 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 41.431 T 09-03-2017 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 BV404_RS02010 9310c7a336ea4eec270952b9f78b4cb6 264 PIRSF PIRSF000388 1 264 4.2E-103 T 09-03-2017 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 BV404_RS02010 9310c7a336ea4eec270952b9f78b4cb6 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 258 6.1E-109 T 09-03-2017 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 BV404_RS02010 9310c7a336ea4eec270952b9f78b4cb6 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 262 8.9E-113 T 09-03-2017 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 BV404_RS06550 c82599ecfd4604307e6e0ad0fb3d9ef4 456 Pfam PF02321 Outer membrane efflux protein 271 449 1.9E-17 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 BV404_RS06550 c82599ecfd4604307e6e0ad0fb3d9ef4 456 Pfam PF02321 Outer membrane efflux protein 60 239 3.5E-28 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 BV404_RS06550 c82599ecfd4604307e6e0ad0fb3d9ef4 456 SUPERFAMILY SSF56954 2 450 2.22E-88 T 09-03-2017 BV404_RS06550 c82599ecfd4604307e6e0ad0fb3d9ef4 456 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 12 450 4.6E-80 T 09-03-2017 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 BV404_RS06550 c82599ecfd4604307e6e0ad0fb3d9ef4 456 Gene3D G3DSA:1.20.1600.10 131 302 1.6E-78 T 09-03-2017 BV404_RS06550 c82599ecfd4604307e6e0ad0fb3d9ef4 456 Gene3D G3DSA:1.20.1600.10 50 86 1.6E-78 T 09-03-2017 BV404_RS06550 c82599ecfd4604307e6e0ad0fb3d9ef4 456 Gene3D G3DSA:1.20.1600.10 338 450 1.6E-78 T 09-03-2017 BV404_RS06550 c82599ecfd4604307e6e0ad0fb3d9ef4 456 Gene3D G3DSA:2.20.200.10 97 130 4.6E-11 T 09-03-2017 BV404_RS06550 c82599ecfd4604307e6e0ad0fb3d9ef4 456 Gene3D G3DSA:2.20.200.10 303 335 4.6E-11 T 09-03-2017 BV404_RS09490 b0346f41cf0a76daa702cb80cdccc159 331 SMART SM00846 3 150 5.8E-93 T 09-03-2017 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS09490 b0346f41cf0a76daa702cb80cdccc159 331 Gene3D G3DSA:3.30.360.10 159 314 8.8E-85 T 09-03-2017 BV404_RS09490 b0346f41cf0a76daa702cb80cdccc159 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 150 4.5E-59 T 09-03-2017 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS09490 b0346f41cf0a76daa702cb80cdccc159 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 3.1E-46 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS09490 b0346f41cf0a76daa702cb80cdccc159 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 3.1E-46 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS09490 b0346f41cf0a76daa702cb80cdccc159 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 3.1E-46 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS09490 b0346f41cf0a76daa702cb80cdccc159 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 3.1E-46 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS09490 b0346f41cf0a76daa702cb80cdccc159 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 3.1E-46 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS09490 b0346f41cf0a76daa702cb80cdccc159 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 5.8E-70 T 09-03-2017 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS09490 b0346f41cf0a76daa702cb80cdccc159 331 SUPERFAMILY SSF51735 3 166 7.91E-66 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS09490 b0346f41cf0a76daa702cb80cdccc159 331 Gene3D G3DSA:3.40.50.720 1 158 2.5E-77 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS09490 b0346f41cf0a76daa702cb80cdccc159 331 SUPERFAMILY SSF55347 149 312 1.5E-78 T 09-03-2017 BV404_RS09490 b0346f41cf0a76daa702cb80cdccc159 331 PIRSF PIRSF000149 1 331 1.7E-133 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS09490 b0346f41cf0a76daa702cb80cdccc159 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 2.9E-135 T 09-03-2017 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS09490 b0346f41cf0a76daa702cb80cdccc159 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 09-03-2017 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS10140 d2fa0ac65fa05082f7f07521feb93a34 92 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 6 92 26.069 T 09-03-2017 IPR007454 Uncharacterised protein family UPF0250 BV404_RS10140 d2fa0ac65fa05082f7f07521feb93a34 92 SUPERFAMILY SSF117991 7 92 6.28E-31 T 09-03-2017 IPR027471 YbeD-like domain BV404_RS10140 d2fa0ac65fa05082f7f07521feb93a34 92 Pfam PF04359 Protein of unknown function (DUF493) 12 92 8.0E-29 T 09-03-2017 IPR007454 Uncharacterised protein family UPF0250 BV404_RS10140 d2fa0ac65fa05082f7f07521feb93a34 92 Gene3D G3DSA:3.30.70.1460 8 92 2.5E-35 T 09-03-2017 IPR027471 YbeD-like domain BV404_RS04925 08ee8fe8ee01b2d94a5f07b9105c3567 460 SUPERFAMILY SSF56954 7 440 2.49E-51 T 09-03-2017 BV404_RS04925 08ee8fe8ee01b2d94a5f07b9105c3567 460 Pfam PF02321 Outer membrane efflux protein 263 440 2.7E-20 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 BV404_RS04925 08ee8fe8ee01b2d94a5f07b9105c3567 460 Pfam PF02321 Outer membrane efflux protein 43 225 1.1E-5 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 BV404_RS04925 08ee8fe8ee01b2d94a5f07b9105c3567 460 Gene3D G3DSA:1.20.1600.10 38 440 1.9E-34 T 09-03-2017 BV404_RS00665 fa9d623c60221726e6432cab05f82b36 246 Gene3D G3DSA:1.10.1060.10 107 230 1.1E-35 T 09-03-2017 BV404_RS00665 fa9d623c60221726e6432cab05f82b36 246 SUPERFAMILY SSF46548 107 226 1.41E-30 T 09-03-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 BV404_RS00665 fa9d623c60221726e6432cab05f82b36 246 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 4.0E-94 T 09-03-2017 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 BV404_RS00665 fa9d623c60221726e6432cab05f82b36 246 SUPERFAMILY SSF54292 5 106 7.21E-30 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 BV404_RS00665 fa9d623c60221726e6432cab05f82b36 246 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 111 1.1E-33 T 09-03-2017 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 BV404_RS00665 fa9d623c60221726e6432cab05f82b36 246 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 09-03-2017 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 BV404_RS00665 fa9d623c60221726e6432cab05f82b36 246 Gene3D G3DSA:3.10.20.30 3 106 3.9E-34 T 09-03-2017 IPR012675 Beta-grasp domain BV404_RS00665 fa9d623c60221726e6432cab05f82b36 246 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BV404_RS00665 fa9d623c60221726e6432cab05f82b36 246 Pfam PF13183 4Fe-4S dicluster domain 147 219 5.1E-11 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BV404_RS06390 511bec6820db33b4b108ce98e31cb7b0 377 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 09-03-2017 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BV404_RS06390 511bec6820db33b4b108ce98e31cb7b0 377 Gene3D G3DSA:1.10.620.20 3 341 2.0E-124 T 09-03-2017 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: R-HSA-499943 BV404_RS06390 511bec6820db33b4b108ce98e31cb7b0 377 SUPERFAMILY SSF47240 3 341 5.24E-112 T 09-03-2017 IPR009078 Ferritin-like superfamily BV404_RS06390 511bec6820db33b4b108ce98e31cb7b0 377 Pfam PF00268 Ribonucleotide reductase, small chain 32 333 3.0E-49 T 09-03-2017 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BV404_RS11025 a58c40324c3e8b9311f13c0019fd5cae 301 SUPERFAMILY SSF46785 5 117 1.36E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS11025 a58c40324c3e8b9311f13c0019fd5cae 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 68 8.1E-17 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS11025 a58c40324c3e8b9311f13c0019fd5cae 301 Gene3D G3DSA:3.40.190.10 95 198 1.5E-23 T 09-03-2017 BV404_RS11025 a58c40324c3e8b9311f13c0019fd5cae 301 Gene3D G3DSA:1.10.10.10 6 84 3.8E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS11025 a58c40324c3e8b9311f13c0019fd5cae 301 Pfam PF03466 LysR substrate binding domain 94 299 2.2E-38 T 09-03-2017 IPR005119 LysR, substrate-binding BV404_RS11025 a58c40324c3e8b9311f13c0019fd5cae 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 5.5E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS11025 a58c40324c3e8b9311f13c0019fd5cae 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 5.5E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS11025 a58c40324c3e8b9311f13c0019fd5cae 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 5.5E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS11025 a58c40324c3e8b9311f13c0019fd5cae 301 Gene3D G3DSA:3.40.190.10 199 275 9.9E-19 T 09-03-2017 BV404_RS11025 a58c40324c3e8b9311f13c0019fd5cae 301 SUPERFAMILY SSF53850 95 300 1.01E-35 T 09-03-2017 BV404_RS13430 6ba7e0a2fb8a0ae4db4105c3deeee562 297 Gene3D G3DSA:3.90.550.10 12 236 5.8E-27 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases BV404_RS13430 6ba7e0a2fb8a0ae4db4105c3deeee562 297 Pfam PF00535 Glycosyl transferase family 2 13 131 1.8E-7 T 09-03-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BV404_RS13430 6ba7e0a2fb8a0ae4db4105c3deeee562 297 SUPERFAMILY SSF53448 12 239 1.93E-24 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases BV404_RS11205 ad1126b4caacaf9d72b04580b73a2deb 96 Gene3D G3DSA:1.10.10.710 20 86 2.0E-24 T 09-03-2017 IPR009813 Uncharacterised protein family YebG BV404_RS11205 ad1126b4caacaf9d72b04580b73a2deb 96 Pfam PF07130 YebG protein 1 72 1.7E-31 T 09-03-2017 IPR009813 Uncharacterised protein family YebG BV404_RS02225 f7c8896e904667224e95e5f2e30f9297 279 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 17 272 8.9E-103 T 09-03-2017 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 BV404_RS02225 f7c8896e904667224e95e5f2e30f9297 279 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 09-03-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BV404_RS02225 f7c8896e904667224e95e5f2e30f9297 279 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 09-03-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BV404_RS02225 f7c8896e904667224e95e5f2e30f9297 279 Pfam PF00809 Pterin binding enzyme 18 258 6.7E-90 T 09-03-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BV404_RS02225 f7c8896e904667224e95e5f2e30f9297 279 Gene3D G3DSA:3.20.20.20 12 275 2.2E-111 T 09-03-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BV404_RS02225 f7c8896e904667224e95e5f2e30f9297 279 SUPERFAMILY SSF51717 5 275 1.96E-103 T 09-03-2017 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BV404_RS12760 7ac3b8f94dc2f150d2434e30bbd7b230 257 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 13 247 39.918 T 09-03-2017 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 BV404_RS12760 7ac3b8f94dc2f150d2434e30bbd7b230 257 PIRSF PIRSF000857 6 252 4.2E-58 T 09-03-2017 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 BV404_RS12760 7ac3b8f94dc2f150d2434e30bbd7b230 257 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 25 246 1.8E-91 T 09-03-2017 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 BV404_RS12760 7ac3b8f94dc2f150d2434e30bbd7b230 257 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 37 247 2.3E-87 T 09-03-2017 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 BV404_RS12760 7ac3b8f94dc2f150d2434e30bbd7b230 257 SUPERFAMILY SSF52402 25 212 2.3E-55 T 09-03-2017 BV404_RS12760 7ac3b8f94dc2f150d2434e30bbd7b230 257 Gene3D G3DSA:3.40.50.620 15 220 8.7E-63 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS12760 7ac3b8f94dc2f150d2434e30bbd7b230 257 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 52 223 8.8E-52 T 09-03-2017 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 BV404_RS05160 8793ecca2881acb541c264319b301e40 268 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS05160 8793ecca2881acb541c264319b301e40 268 Pfam PF00005 ABC transporter 25 172 2.1E-31 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS05160 8793ecca2881acb541c264319b301e40 268 Gene3D G3DSA:3.40.50.300 9 241 4.4E-65 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS05160 8793ecca2881acb541c264319b301e40 268 SMART SM00382 33 230 2.6E-15 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS05160 8793ecca2881acb541c264319b301e40 268 SUPERFAMILY SSF52540 9 235 5.21E-63 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS07575 875b4c3dd769475bd9ecdd14ee092f9b 465 Gene3D G3DSA:2.120.10.30 170 321 5.4E-4 T 09-03-2017 IPR011042 Six-bladed beta-propeller, TolB-like BV404_RS07575 875b4c3dd769475bd9ecdd14ee092f9b 465 SUPERFAMILY SSF75011 334 349 8.76E-6 T 09-03-2017 BV404_RS07575 875b4c3dd769475bd9ecdd14ee092f9b 465 SUPERFAMILY SSF75011 408 457 8.76E-6 T 09-03-2017 BV404_RS07575 875b4c3dd769475bd9ecdd14ee092f9b 465 SUPERFAMILY SSF75011 184 259 8.76E-6 T 09-03-2017 BV404_RS07575 875b4c3dd769475bd9ecdd14ee092f9b 465 Pfam PF13449 Esterase-like activity of phytase 61 427 2.0E-56 T 09-03-2017 IPR027372 Phytase-like domain BV404_RS05260 a84a86387afe28fae307019fe7a271ee 479 TIGRFAM TIGR01996 PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component 3 465 2.6E-196 T 09-03-2017 IPR010973 Phosphotransferase system, sucrose-specific IIBC component GO:0008982|GO:0009401|GO:0016021 BV404_RS05260 a84a86387afe28fae307019fe7a271ee 479 Gene3D G3DSA:3.30.1360.60 2 83 3.7E-28 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 BV404_RS05260 a84a86387afe28fae307019fe7a271ee 479 SUPERFAMILY SSF55604 6 82 3.27E-21 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 BV404_RS05260 a84a86387afe28fae307019fe7a271ee 479 Pfam PF00367 phosphotransferase system, EIIB 8 41 2.6E-14 T 09-03-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BV404_RS05260 a84a86387afe28fae307019fe7a271ee 479 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 28 110 1.3E-23 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 BV404_RS05260 a84a86387afe28fae307019fe7a271ee 479 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 09-03-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BV404_RS05260 a84a86387afe28fae307019fe7a271ee 479 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 164 453 7.2E-93 T 09-03-2017 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 BV404_RS05260 a84a86387afe28fae307019fe7a271ee 479 Pfam PF02378 Phosphotransferase system, EIIC 110 410 5.3E-51 T 09-03-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BV404_RS14370 a832c1033fbec23e1739d8526e9ed8a9 68 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 5 68 3.9E-16 T 09-03-2017 IPR010035 ThiS, thiamine-biosynthesis BV404_RS14370 a832c1033fbec23e1739d8526e9ed8a9 68 Pfam PF02597 ThiS family 6 68 7.2E-14 T 09-03-2017 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 BV404_RS14370 a832c1033fbec23e1739d8526e9ed8a9 68 Gene3D G3DSA:3.10.20.30 3 68 2.7E-20 T 09-03-2017 IPR012675 Beta-grasp domain BV404_RS14370 a832c1033fbec23e1739d8526e9ed8a9 68 SUPERFAMILY SSF54285 3 68 2.47E-15 T 09-03-2017 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp BV404_RS13640 5f8b9cfc9af334fde7d4ff4a30e791e6 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 36.168 T 09-03-2017 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|Reactome: R-HSA-500753 BV404_RS13640 5f8b9cfc9af334fde7d4ff4a30e791e6 213 Gene3D G3DSA:3.40.50.2020 7 212 2.3E-84 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like BV404_RS13640 5f8b9cfc9af334fde7d4ff4a30e791e6 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 8.7E-71 T 09-03-2017 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|Reactome: R-HSA-500753 BV404_RS13640 5f8b9cfc9af334fde7d4ff4a30e791e6 213 SUPERFAMILY SSF53271 2 211 5.68E-49 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like BV404_RS13640 5f8b9cfc9af334fde7d4ff4a30e791e6 213 Pfam PF00156 Phosphoribosyl transferase domain 43 161 2.9E-12 T 09-03-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 BV404_RS05310 aa1ecd57fd42791d691bbab5ac3429e6 395 SUPERFAMILY SSF53901 8 237 8.12E-39 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 BV404_RS05310 aa1ecd57fd42791d691bbab5ac3429e6 395 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 244 344 1.0E-26 T 09-03-2017 IPR014031 Beta-ketoacyl synthase, C-terminal BV404_RS05310 aa1ecd57fd42791d691bbab5ac3429e6 395 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 09-03-2017 IPR018201 Beta-ketoacyl synthase, active site BV404_RS05310 aa1ecd57fd42791d691bbab5ac3429e6 395 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 93 237 1.2E-18 T 09-03-2017 IPR014030 Beta-ketoacyl synthase, N-terminal BV404_RS05310 aa1ecd57fd42791d691bbab5ac3429e6 395 Gene3D G3DSA:3.40.47.10 15 237 4.5E-31 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 BV404_RS05310 aa1ecd57fd42791d691bbab5ac3429e6 395 SMART SM00825 Beta-ketoacyl synthase 20 338 1.8E-9 T 09-03-2017 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BV404_RS05310 aa1ecd57fd42791d691bbab5ac3429e6 395 Gene3D G3DSA:3.40.47.10 249 392 2.4E-47 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 BV404_RS05310 aa1ecd57fd42791d691bbab5ac3429e6 395 SUPERFAMILY SSF53901 211 391 6.92E-45 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 BV404_RS00435 b3b9adf1fcc0cc61dd424922694e01f9 406 PIRSF PIRSF006356 1 406 1.7E-150 T 09-03-2017 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 BV404_RS00435 b3b9adf1fcc0cc61dd424922694e01f9 406 Gene3D G3DSA:3.75.10.10 149 406 1.3E-128 T 09-03-2017 BV404_RS00435 b3b9adf1fcc0cc61dd424922694e01f9 406 Gene3D G3DSA:3.75.10.10 1 67 1.3E-128 T 09-03-2017 BV404_RS00435 b3b9adf1fcc0cc61dd424922694e01f9 406 PRINTS PR01466 Bacterial arginine deiminase signature 177 192 4.6E-45 T 09-03-2017 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 BV404_RS00435 b3b9adf1fcc0cc61dd424922694e01f9 406 PRINTS PR01466 Bacterial arginine deiminase signature 2 22 4.6E-45 T 09-03-2017 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 BV404_RS00435 b3b9adf1fcc0cc61dd424922694e01f9 406 PRINTS PR01466 Bacterial arginine deiminase signature 362 376 4.6E-45 T 09-03-2017 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 BV404_RS00435 b3b9adf1fcc0cc61dd424922694e01f9 406 PRINTS PR01466 Bacterial arginine deiminase signature 149 167 4.6E-45 T 09-03-2017 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 BV404_RS00435 b3b9adf1fcc0cc61dd424922694e01f9 406 PRINTS PR01466 Bacterial arginine deiminase signature 385 403 4.6E-45 T 09-03-2017 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 BV404_RS00435 b3b9adf1fcc0cc61dd424922694e01f9 406 PRINTS PR01466 Bacterial arginine deiminase signature 342 359 4.6E-45 T 09-03-2017 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 BV404_RS00435 b3b9adf1fcc0cc61dd424922694e01f9 406 Hamap MF_00242 Arginine deiminase [arcA]. 1 406 44.717 T 09-03-2017 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 BV404_RS00435 b3b9adf1fcc0cc61dd424922694e01f9 406 TIGRFAM TIGR01078 arcA: arginine deiminase 4 406 2.0E-161 T 09-03-2017 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 BV404_RS00435 b3b9adf1fcc0cc61dd424922694e01f9 406 Pfam PF02274 Amidinotransferase 19 403 7.6E-95 T 09-03-2017 BV404_RS00435 b3b9adf1fcc0cc61dd424922694e01f9 406 SUPERFAMILY SSF55909 3 406 1.09E-130 T 09-03-2017 BV404_RS02935 3ff9a356cbb304246df98c1e7a63e543 169 SUPERFAMILY SSF111384 26 168 3.01E-31 T 09-03-2017 IPR024930 Skp domain BV404_RS02935 3ff9a356cbb304246df98c1e7a63e543 169 Gene3D G3DSA:3.30.910.20 17 64 1.4E-32 T 09-03-2017 BV404_RS02935 3ff9a356cbb304246df98c1e7a63e543 169 Gene3D G3DSA:3.30.910.20 102 169 1.4E-32 T 09-03-2017 BV404_RS02935 3ff9a356cbb304246df98c1e7a63e543 169 SMART SM00935 15 169 9.6E-42 T 09-03-2017 IPR005632 Chaperone protein Skp GO:0051082 BV404_RS02935 3ff9a356cbb304246df98c1e7a63e543 169 Pfam PF03938 Outer membrane protein (OmpH-like) 13 167 2.4E-25 T 09-03-2017 IPR005632 Chaperone protein Skp GO:0051082 BV404_RS02935 3ff9a356cbb304246df98c1e7a63e543 169 PIRSF PIRSF002094 1 169 3.7E-41 T 09-03-2017 IPR005632 Chaperone protein Skp GO:0051082 BV404_RS01925 d6b693bb4bdd6a9f768bf0b9217a7d75 142 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 32 2.7E-10 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site BV404_RS01925 d6b693bb4bdd6a9f768bf0b9217a7d75 142 PRINTS PR00813 Bacterial general secretion pathway protein G signature 47 65 3.1E-10 T 09-03-2017 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 BV404_RS01925 d6b693bb4bdd6a9f768bf0b9217a7d75 142 PRINTS PR00813 Bacterial general secretion pathway protein G signature 11 36 3.1E-10 T 09-03-2017 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 BV404_RS01925 d6b693bb4bdd6a9f768bf0b9217a7d75 142 SUPERFAMILY SSF54523 12 132 1.92E-25 T 09-03-2017 BV404_RS01925 d6b693bb4bdd6a9f768bf0b9217a7d75 142 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site BV404_RS01925 d6b693bb4bdd6a9f768bf0b9217a7d75 142 Pfam PF00114 Pilin (bacterial filament) 40 139 5.1E-10 T 09-03-2017 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 BV404_RS01925 d6b693bb4bdd6a9f768bf0b9217a7d75 142 Pfam PF13633 Prokaryotic N-terminal methylation site 9 35 2.3E-12 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site BV404_RS01925 d6b693bb4bdd6a9f768bf0b9217a7d75 142 Gene3D G3DSA:3.30.700.10 12 126 7.9E-27 T 09-03-2017 BV404_RS11780 5cb8e005093f53c3ff6bfc14dfc7bade 148 Pfam PF06295 Protein of unknown function (DUF1043) 6 130 2.3E-44 T 09-03-2017 IPR009386 Protein of unknown function DUF1043 BV404_RS11780 5cb8e005093f53c3ff6bfc14dfc7bade 148 PIRSF PIRSF006318 1 137 1.3E-49 T 09-03-2017 IPR009386 Protein of unknown function DUF1043 BV404_RS00945 4faa6627343e401366f60ac3f0ae7c83 100 Gene3D G3DSA:3.30.70.330 6 98 7.1E-36 T 09-03-2017 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 BV404_RS00945 4faa6627343e401366f60ac3f0ae7c83 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.704 T 09-03-2017 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 BV404_RS00945 4faa6627343e401366f60ac3f0ae7c83 100 SUPERFAMILY SSF54189 6 97 3.6E-32 T 09-03-2017 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS00945 4faa6627343e401366f60ac3f0ae7c83 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 09-03-2017 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS00945 4faa6627343e401366f60ac3f0ae7c83 100 Pfam PF00276 Ribosomal protein L23 9 95 1.3E-31 T 09-03-2017 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 BV404_RS03045 a45a577b12dbf67b615daa2dd665d9d9 212 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 09-03-2017 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BV404_RS03045 a45a577b12dbf67b615daa2dd665d9d9 212 SUPERFAMILY SSF53328 4 199 4.84E-65 T 09-03-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BV404_RS03045 a45a577b12dbf67b615daa2dd665d9d9 212 Gene3D G3DSA:3.40.50.170 2 196 1.1E-70 T 09-03-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BV404_RS03045 a45a577b12dbf67b615daa2dd665d9d9 212 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 3 192 2.3E-77 T 09-03-2017 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 BV404_RS03045 a45a577b12dbf67b615daa2dd665d9d9 212 Pfam PF00551 Formyl transferase 3 182 8.7E-64 T 09-03-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BV404_RS03045 a45a577b12dbf67b615daa2dd665d9d9 212 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 31.367 T 09-03-2017 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 BV404_RS07530 c1f93fdf5d0d2187c2ce8d4574080ddb 940 Gene3D G3DSA:3.30.420.40 5 227 3.3E-35 T 09-03-2017 BV404_RS07530 c1f93fdf5d0d2187c2ce8d4574080ddb 940 Pfam PF00012 Hsp70 protein 130 303 6.0E-16 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BV404_RS07530 c1f93fdf5d0d2187c2ce8d4574080ddb 940 PRINTS PR00301 70kDa heat shock protein signature 165 185 1.0E-7 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BV404_RS07530 c1f93fdf5d0d2187c2ce8d4574080ddb 940 PRINTS PR00301 70kDa heat shock protein signature 232 242 1.0E-7 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BV404_RS07530 c1f93fdf5d0d2187c2ce8d4574080ddb 940 PRINTS PR00301 70kDa heat shock protein signature 6 19 1.0E-7 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BV404_RS07530 c1f93fdf5d0d2187c2ce8d4574080ddb 940 Pfam PF12531 DNA-K related protein 690 937 1.6E-101 T 09-03-2017 IPR021030 Protein of unknown function DUF3731 BV404_RS07530 c1f93fdf5d0d2187c2ce8d4574080ddb 940 Gene3D G3DSA:3.30.420.40 228 336 2.1E-16 T 09-03-2017 BV404_RS07530 c1f93fdf5d0d2187c2ce8d4574080ddb 940 SUPERFAMILY SSF53067 6 209 3.45E-32 T 09-03-2017 BV404_RS07530 c1f93fdf5d0d2187c2ce8d4574080ddb 940 SUPERFAMILY SSF53067 403 456 6.09E-20 T 09-03-2017 BV404_RS07530 c1f93fdf5d0d2187c2ce8d4574080ddb 940 SUPERFAMILY SSF53067 223 369 6.09E-20 T 09-03-2017 BV404_RS18915 7fc3256aec0883c148fb0a33ededd084 146 Pfam PF00155 Aminotransferase class I and II 1 145 2.2E-25 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BV404_RS18915 7fc3256aec0883c148fb0a33ededd084 146 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 2 15 - T 09-03-2017 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 BV404_RS18915 7fc3256aec0883c148fb0a33ededd084 146 SUPERFAMILY SSF53383 1 145 2.68E-38 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase BV404_RS18915 7fc3256aec0883c148fb0a33ededd084 146 Gene3D G3DSA:3.90.1150.10 1 145 6.3E-48 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 BV404_RS18915 7fc3256aec0883c148fb0a33ededd084 146 PRINTS PR00799 Aspartate aminotransferase signature 100 118 2.0E-16 T 09-03-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 BV404_RS18915 7fc3256aec0883c148fb0a33ededd084 146 PRINTS PR00799 Aspartate aminotransferase signature 32 57 2.0E-16 T 09-03-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 BV404_RS10230 17a6903991127e14cdcea2f0f2435cd1 118 ProDom PD015842 PTS IIA COMPONENT GLUCITOL/SORBITOL-SPECIFIC SYSTEM ENZYME TRANSFERASE SYSTEM PHOSPHOTRANSFERASE EIIA 8 117 4.0E-20 T 09-03-2017 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 BV404_RS10230 17a6903991127e14cdcea2f0f2435cd1 118 SUPERFAMILY SSF141530 3 117 9.29E-34 T 09-03-2017 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 BV404_RS10230 17a6903991127e14cdcea2f0f2435cd1 118 Pfam PF03829 PTS system glucitol/sorbitol-specific IIA component 4 115 1.6E-35 T 09-03-2017 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 BV404_RS10230 17a6903991127e14cdcea2f0f2435cd1 118 Gene3D G3DSA:2.40.33.40 3 117 3.9E-38 T 09-03-2017 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 BV404_RS08245 7a65fb55a4eda096ac21ce30951e1b62 367 Gene3D G3DSA:3.30.470.20 136 282 5.4E-41 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 BV404_RS08245 7a65fb55a4eda096ac21ce30951e1b62 367 SUPERFAMILY SSF56104 14 344 4.25E-65 T 09-03-2017 BV404_RS08245 7a65fb55a4eda096ac21ce30951e1b62 367 TIGRFAM TIGR02735 purC_vibrio: phosphoribosylaminoimidazole-succinocarboxamide synthase 2 366 1.1E-218 T 09-03-2017 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 BV404_RS08245 7a65fb55a4eda096ac21ce30951e1b62 367 Pfam PF01259 SAICAR synthetase 22 293 2.2E-48 T 09-03-2017 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BV404_RS08245 7a65fb55a4eda096ac21ce30951e1b62 367 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 19 342 21.577 T 09-03-2017 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BV404_RS08245 7a65fb55a4eda096ac21ce30951e1b62 367 Gene3D G3DSA:3.30.200.20 13 135 1.1E-33 T 09-03-2017 BV404_RS08245 7a65fb55a4eda096ac21ce30951e1b62 367 ProSitePatterns PS01057 SAICAR synthetase signature 1. 124 138 - T 09-03-2017 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BV404_RS05365 d3c15624c0a71cac9b637927520cddf6 86 Gene3D G3DSA:1.10.1200.10 3 83 7.2E-18 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain BV404_RS05365 d3c15624c0a71cac9b637927520cddf6 86 SUPERFAMILY SSF47336 5 84 8.77E-14 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain BV404_RS05365 d3c15624c0a71cac9b637927520cddf6 86 Pfam PF00550 Phosphopantetheine attachment site 7 80 9.9E-11 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain BV404_RS13485 cdc9ec838df0b3ce41b3e65237f142cb 354 SUPERFAMILY SSF51735 1 337 6.77E-92 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS13485 cdc9ec838df0b3ce41b3e65237f142cb 354 Gene3D G3DSA:3.40.50.720 1 190 5.1E-64 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS13485 cdc9ec838df0b3ce41b3e65237f142cb 354 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 326 4.2E-97 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS13485 cdc9ec838df0b3ce41b3e65237f142cb 354 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 338 1.4E-157 T 09-03-2017 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 BV404_RS13485 cdc9ec838df0b3ce41b3e65237f142cb 354 Gene3D G3DSA:3.90.25.10 191 338 6.7E-55 T 09-03-2017 BV404_RS10520 40e58ca65bc7ab2e5baf262d1371d067 281 SUPERFAMILY SSF55620 184 264 5.63E-9 T 09-03-2017 BV404_RS10520 40e58ca65bc7ab2e5baf262d1371d067 281 Gene3D G3DSA:3.30.1130.10 21 133 1.0E-44 T 09-03-2017 BV404_RS10520 40e58ca65bc7ab2e5baf262d1371d067 281 PIRSF PIRSF004750 6 281 3.0E-130 T 09-03-2017 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 BV404_RS10520 40e58ca65bc7ab2e5baf262d1371d067 281 Pfam PF14489 QueF-like protein 194 270 5.9E-26 T 09-03-2017 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 BV404_RS10520 40e58ca65bc7ab2e5baf262d1371d067 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 164.348 T 09-03-2017 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 BV404_RS10520 40e58ca65bc7ab2e5baf262d1371d067 281 Gene3D G3DSA:3.30.1130.10 144 280 7.7E-55 T 09-03-2017 BV404_RS10520 40e58ca65bc7ab2e5baf262d1371d067 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 130 1.2E-49 T 09-03-2017 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 BV404_RS10520 40e58ca65bc7ab2e5baf262d1371d067 281 TIGRFAM TIGR03138 QueF: queuine synthase 11 281 1.7E-129 T 09-03-2017 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 BV404_RS02315 54ecd2d5db5a6b62a255907c7356bca6 175 Pfam PF02036 SCP-2 sterol transfer family 45 134 1.5E-17 T 09-03-2017 IPR003033 SCP2 sterol-binding domain BV404_RS02315 54ecd2d5db5a6b62a255907c7356bca6 175 PIRSF PIRSF025550 1 174 8.9E-85 T 09-03-2017 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT BV404_RS02315 54ecd2d5db5a6b62a255907c7356bca6 175 Gene3D G3DSA:3.30.1050.10 61 136 9.7E-11 T 09-03-2017 IPR003033 SCP2 sterol-binding domain BV404_RS02315 54ecd2d5db5a6b62a255907c7356bca6 175 SUPERFAMILY SSF55718 41 139 3.53E-20 T 09-03-2017 IPR003033 SCP2 sterol-binding domain BV404_RS02485 d208e80b8373d042ed8f3d66c77b459b 310 Gene3D G3DSA:3.40.50.10490 11 256 4.7E-89 T 09-03-2017 BV404_RS02485 d208e80b8373d042ed8f3d66c77b459b 310 SUPERFAMILY SSF53697 12 256 1.91E-73 T 09-03-2017 BV404_RS02485 d208e80b8373d042ed8f3d66c77b459b 310 Pfam PF13580 SIS domain 49 172 1.6E-9 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 BV404_RS02485 d208e80b8373d042ed8f3d66c77b459b 310 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 192 209 - T 09-03-2017 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 BV404_RS02485 d208e80b8373d042ed8f3d66c77b459b 310 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 9 302 44.012 T 09-03-2017 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126 BV404_RS02485 d208e80b8373d042ed8f3d66c77b459b 310 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 13 303 7.0E-132 T 09-03-2017 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126 BV404_RS00405 3092b97bb698d552d8fc12221f913be9 595 Gene3D G3DSA:2.60.40.1250 32 147 1.5E-43 T 09-03-2017 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain BV404_RS00405 3092b97bb698d552d8fc12221f913be9 595 Pfam PF13899 Thioredoxin-like 483 562 3.8E-16 T 09-03-2017 BV404_RS00405 3092b97bb698d552d8fc12221f913be9 595 Gene3D G3DSA:3.40.30.10 481 591 9.2E-38 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS00405 3092b97bb698d552d8fc12221f913be9 595 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 198 401 6.7E-17 T 09-03-2017 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 BV404_RS00405 3092b97bb698d552d8fc12221f913be9 595 ProSitePatterns PS00194 Thioredoxin family active site. 502 520 - T 09-03-2017 IPR017937 Thioredoxin, conserved site GO:0045454 BV404_RS00405 3092b97bb698d552d8fc12221f913be9 595 Pfam PF11412 Disulphide bond corrector protein DsbC 35 146 2.1E-31 T 09-03-2017 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain BV404_RS00405 3092b97bb698d552d8fc12221f913be9 595 SUPERFAMILY SSF74863 33 146 2.22E-41 T 09-03-2017 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain BV404_RS00405 3092b97bb698d552d8fc12221f913be9 595 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 594 38.975 T 09-03-2017 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 BV404_RS00405 3092b97bb698d552d8fc12221f913be9 595 SUPERFAMILY SSF52833 473 591 2.22E-23 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS07885 628589a9b620c327bee741cd98479c94 365 PIRSF PIRSF029038 34 365 3.7E-152 T 09-03-2017 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 BV404_RS07885 628589a9b620c327bee741cd98479c94 365 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 45 355 54.769 T 09-03-2017 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 BV404_RS07885 628589a9b620c327bee741cd98479c94 365 SUPERFAMILY SSF53335 84 353 6.48E-34 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS07885 628589a9b620c327bee741cd98479c94 365 Gene3D G3DSA:3.40.50.150 141 243 6.1E-8 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS07885 628589a9b620c327bee741cd98479c94 365 Pfam PF05971 Protein of unknown function (DUF890) 45 353 2.8E-139 T 09-03-2017 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 BV404_RS05705 28174ce3377f14af013e3a6912154b74 73 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 09-03-2017 IPR019844 Cold-shock conserved site BV404_RS05705 28174ce3377f14af013e3a6912154b74 73 PRINTS PR00050 Cold shock protein signature 4 19 4.8E-15 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BV404_RS05705 28174ce3377f14af013e3a6912154b74 73 PRINTS PR00050 Cold shock protein signature 25 34 4.8E-15 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BV404_RS05705 28174ce3377f14af013e3a6912154b74 73 PRINTS PR00050 Cold shock protein signature 40 58 4.8E-15 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BV404_RS05705 28174ce3377f14af013e3a6912154b74 73 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 2.5E-28 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BV404_RS05705 28174ce3377f14af013e3a6912154b74 73 SMART SM00357 3 67 4.9E-27 T 09-03-2017 IPR011129 Cold shock protein GO:0003676 BV404_RS05705 28174ce3377f14af013e3a6912154b74 73 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 68 2.0E-43 T 09-03-2017 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355|GO:0006950 BV404_RS05705 28174ce3377f14af013e3a6912154b74 73 Gene3D G3DSA:2.40.50.140 1 65 1.8E-30 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS05705 28174ce3377f14af013e3a6912154b74 73 SUPERFAMILY SSF50249 1 67 7.07E-24 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS05705 28174ce3377f14af013e3a6912154b74 73 PIRSF PIRSF002599 1 73 3.4E-23 T 09-03-2017 IPR012156 Cold shock, CspA GO:0003676 BV404_RS11075 bc2e291495000a02864c12e0adf2f6ce 320 SUPERFAMILY SSF53850 32 309 2.72E-65 T 09-03-2017 BV404_RS11075 bc2e291495000a02864c12e0adf2f6ce 320 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 19 302 8.2E-76 T 09-03-2017 IPR011862 Phosphate binding protein GO:0006810 BV404_RS11075 bc2e291495000a02864c12e0adf2f6ce 320 Gene3D G3DSA:3.40.190.10 118 260 2.2E-35 T 09-03-2017 BV404_RS11075 bc2e291495000a02864c12e0adf2f6ce 320 Gene3D G3DSA:3.40.190.10 37 115 7.4E-7 T 09-03-2017 BV404_RS11075 bc2e291495000a02864c12e0adf2f6ce 320 Gene3D G3DSA:3.40.190.10 261 310 7.4E-7 T 09-03-2017 BV404_RS11075 bc2e291495000a02864c12e0adf2f6ce 320 Pfam PF12849 PBP superfamily domain 32 289 5.2E-28 T 09-03-2017 IPR024370 PBP domain BV404_RS10665 ca72bddb036f5e158d26446fc98f773a 67 Pfam PF06786 Uncharacterised protein family (UPF0253) 1 67 2.5E-35 T 09-03-2017 IPR009624 Uncharacterised protein family UPF0253 BV404_RS10665 ca72bddb036f5e158d26446fc98f773a 67 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 1 67 27.833 T 09-03-2017 IPR009624 Uncharacterised protein family UPF0253 BV404_RS10665 ca72bddb036f5e158d26446fc98f773a 67 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 7 65 2.0E-26 T 09-03-2017 IPR009624 Uncharacterised protein family UPF0253 BV404_RS01185 e4b1d3bc187e55a05197c1d0f61fb636 115 SUPERFAMILY SSF110857 3 114 1.7E-32 T 09-03-2017 IPR013024 Butirosin biosynthesis, BtrG-like BV404_RS01185 e4b1d3bc187e55a05197c1d0f61fb636 115 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 5 112 6.9E-27 T 09-03-2017 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like BV404_RS01185 e4b1d3bc187e55a05197c1d0f61fb636 115 Gene3D G3DSA:3.10.490.10 2 114 1.4E-40 T 09-03-2017 IPR013024 Butirosin biosynthesis, BtrG-like BV404_RS04545 8cf0972b0b3915274c38b58d4603a394 223 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 220 25.089 T 09-03-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BV404_RS04545 8cf0972b0b3915274c38b58d4603a394 223 PRINTS PR01008 Flagellar L-ring protein signature 162 178 1.6E-21 T 09-03-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BV404_RS04545 8cf0972b0b3915274c38b58d4603a394 223 PRINTS PR01008 Flagellar L-ring protein signature 68 80 1.6E-21 T 09-03-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BV404_RS04545 8cf0972b0b3915274c38b58d4603a394 223 PRINTS PR01008 Flagellar L-ring protein signature 183 197 1.6E-21 T 09-03-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BV404_RS04545 8cf0972b0b3915274c38b58d4603a394 223 PRINTS PR01008 Flagellar L-ring protein signature 199 213 1.6E-21 T 09-03-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BV404_RS04545 8cf0972b0b3915274c38b58d4603a394 223 PRINTS PR01008 Flagellar L-ring protein signature 136 151 1.6E-21 T 09-03-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BV404_RS04545 8cf0972b0b3915274c38b58d4603a394 223 Pfam PF02107 Flagellar L-ring protein 46 221 6.4E-59 T 09-03-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BV404_RS11020 2dc273a79674dd8b8cd5ba303a2fa0f0 545 SUPERFAMILY SSF51645 9 544 5.23E-189 T 09-03-2017 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 BV404_RS11020 2dc273a79674dd8b8cd5ba303a2fa0f0 545 Pfam PF01274 Malate synthase 25 544 1.8E-197 T 09-03-2017 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 BV404_RS11020 2dc273a79674dd8b8cd5ba303a2fa0f0 545 Gene3D G3DSA:1.20.1220.12 427 538 3.0E-36 T 09-03-2017 BV404_RS11020 2dc273a79674dd8b8cd5ba303a2fa0f0 545 PIRSF PIRSF001363 13 545 7.0E-252 T 09-03-2017 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 BV404_RS11020 2dc273a79674dd8b8cd5ba303a2fa0f0 545 Gene3D G3DSA:3.20.20.360 84 426 2.0E-117 T 09-03-2017 BV404_RS11020 2dc273a79674dd8b8cd5ba303a2fa0f0 545 ProSitePatterns PS00510 Malate synthase signature. 278 293 - T 09-03-2017 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 BV404_RS11020 2dc273a79674dd8b8cd5ba303a2fa0f0 545 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 35 544 3.6E-265 T 09-03-2017 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 BV404_RS03015 95ed17d9a403e1d6a836ecbc9bd63634 155 SUPERFAMILY SSF53098 3 143 2.4E-57 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 BV404_RS03015 95ed17d9a403e1d6a836ecbc9bd63634 155 Gene3D G3DSA:3.30.420.10 2 148 3.3E-60 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 BV404_RS03015 95ed17d9a403e1d6a836ecbc9bd63634 155 Hamap MF_00042 Ribonuclease H [rnhA]. 2 149 36.466 T 09-03-2017 IPR022892 Ribonuclease H GO:0004523 BV404_RS03015 95ed17d9a403e1d6a836ecbc9bd63634 155 Pfam PF00075 RNase H 3 141 2.9E-53 T 09-03-2017 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 BV404_RS10775 8601bcefa6de289d8845093011c5792c 144 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 3.0E-30 T 09-03-2017 IPR005031 Coenzyme Q-binding protein COQ10, START domain BV404_RS10775 8601bcefa6de289d8845093011c5792c 144 SUPERFAMILY SSF55961 1 142 1.33E-32 T 09-03-2017 BV404_RS10775 8601bcefa6de289d8845093011c5792c 144 Gene3D G3DSA:3.30.530.20 1 142 3.6E-47 T 09-03-2017 IPR023393 START-like domain BV404_RS09070 01f1f1fa39737c4eba047935b50cbb5c 663 Gene3D G3DSA:1.10.287.950 416 632 1.7E-55 T 09-03-2017 BV404_RS09070 01f1f1fa39737c4eba047935b50cbb5c 663 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 464 661 2.2E-51 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 BV404_RS09070 01f1f1fa39737c4eba047935b50cbb5c 663 SMART SM00304 334 386 1.0E-6 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 BV404_RS09070 01f1f1fa39737c4eba047935b50cbb5c 663 SUPERFAMILY SSF58104 354 663 6.54E-74 T 09-03-2017 BV404_RS09070 01f1f1fa39737c4eba047935b50cbb5c 663 Pfam PF00672 HAMP domain 315 383 1.3E-10 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 BV404_RS09070 01f1f1fa39737c4eba047935b50cbb5c 663 SMART SM00283 401 662 1.3E-75 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 BV404_RS09070 01f1f1fa39737c4eba047935b50cbb5c 663 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 422 451 6.0E-22 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 BV404_RS09070 01f1f1fa39737c4eba047935b50cbb5c 663 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 528 557 6.0E-22 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 BV404_RS09070 01f1f1fa39737c4eba047935b50cbb5c 663 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 499 526 6.0E-22 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 BV404_RS03450 6e83fd665857e14df5bf2248ceece6ca 180 Pfam PF13740 ACT domain 3 78 1.2E-24 T 09-03-2017 BV404_RS03450 6e83fd665857e14df5bf2248ceece6ca 180 SUPERFAMILY SSF55021 1 83 6.87E-18 T 09-03-2017 BV404_RS03450 6e83fd665857e14df5bf2248ceece6ca 180 Gene3D G3DSA:3.30.70.260 1 83 2.9E-27 T 09-03-2017 BV404_RS03450 6e83fd665857e14df5bf2248ceece6ca 180 SUPERFAMILY SSF55021 88 176 4.3E-21 T 09-03-2017 BV404_RS03450 6e83fd665857e14df5bf2248ceece6ca 180 Gene3D G3DSA:3.30.70.260 88 179 4.7E-37 T 09-03-2017 BV404_RS03450 6e83fd665857e14df5bf2248ceece6ca 180 PIRSF PIRSF028103 1 178 1.5E-61 T 09-03-2017 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 BV404_RS05185 f0ffb14ca2b9e3e0bed44917f3ee00e7 215 SUPERFAMILY SSF51391 3 201 6.28E-66 T 09-03-2017 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BV404_RS05185 f0ffb14ca2b9e3e0bed44917f3ee00e7 215 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 4 204 27.448 T 09-03-2017 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BV404_RS05185 f0ffb14ca2b9e3e0bed44917f3ee00e7 215 Pfam PF02581 Thiamine monophosphate synthase/TENI 6 186 2.0E-64 T 09-03-2017 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BV404_RS05185 f0ffb14ca2b9e3e0bed44917f3ee00e7 215 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 6 198 9.3E-66 T 09-03-2017 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BV404_RS05185 f0ffb14ca2b9e3e0bed44917f3ee00e7 215 Gene3D G3DSA:3.20.20.70 3 206 6.7E-76 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS05535 16e07b84c4ca5ef573616bb41d8481ea 275 Pfam PF00005 ABC transporter 25 166 5.8E-31 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS05535 16e07b84c4ca5ef573616bb41d8481ea 275 SMART SM00382 34 216 9.1E-19 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS05535 16e07b84c4ca5ef573616bb41d8481ea 275 Gene3D G3DSA:3.40.50.300 5 222 3.7E-65 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS05535 16e07b84c4ca5ef573616bb41d8481ea 275 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS05535 16e07b84c4ca5ef573616bb41d8481ea 275 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 25 254 1.3E-107 T 09-03-2017 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 BV404_RS05535 16e07b84c4ca5ef573616bb41d8481ea 275 SUPERFAMILY SSF52540 6 233 2.28E-69 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS00130 fc58ddd7fbc5227d672ba5f7f70f986a 467 Pfam PF00072 Response regulator receiver domain 6 115 2.5E-28 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS00130 fc58ddd7fbc5227d672ba5f7f70f986a 467 Gene3D G3DSA:1.10.8.60 315 391 2.0E-21 T 09-03-2017 BV404_RS00130 fc58ddd7fbc5227d672ba5f7f70f986a 467 SUPERFAMILY SSF46689 382 466 6.81E-19 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS00130 fc58ddd7fbc5227d672ba5f7f70f986a 467 SUPERFAMILY SSF52172 2 187 1.37E-42 T 09-03-2017 IPR011006 CheY-like superfamily BV404_RS00130 fc58ddd7fbc5227d672ba5f7f70f986a 467 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 09-03-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BV404_RS00130 fc58ddd7fbc5227d672ba5f7f70f986a 467 Gene3D G3DSA:3.40.50.300 140 314 5.6E-62 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS00130 fc58ddd7fbc5227d672ba5f7f70f986a 467 SMART SM00448 4 115 2.0E-32 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS00130 fc58ddd7fbc5227d672ba5f7f70f986a 467 SUPERFAMILY SSF52540 141 385 4.8E-74 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS00130 fc58ddd7fbc5227d672ba5f7f70f986a 467 Pfam PF02954 Bacterial regulatory protein, Fis family 426 466 5.9E-16 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BV404_RS00130 fc58ddd7fbc5227d672ba5f7f70f986a 467 Pfam PF00158 Sigma-54 interaction domain 142 309 1.3E-71 T 09-03-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BV404_RS00130 fc58ddd7fbc5227d672ba5f7f70f986a 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 449 4.4E-7 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BV404_RS00130 fc58ddd7fbc5227d672ba5f7f70f986a 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 467 4.4E-7 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BV404_RS00130 fc58ddd7fbc5227d672ba5f7f70f986a 467 SMART SM00382 162 324 6.3E-10 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS00130 fc58ddd7fbc5227d672ba5f7f70f986a 467 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 166 179 - T 09-03-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BV404_RS00130 fc58ddd7fbc5227d672ba5f7f70f986a 467 Gene3D G3DSA:1.10.10.60 401 466 5.2E-20 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS00130 fc58ddd7fbc5227d672ba5f7f70f986a 467 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 466 3.7E-243 T 09-03-2017 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 BV404_RS00130 fc58ddd7fbc5227d672ba5f7f70f986a 467 Gene3D G3DSA:3.40.50.2300 6 132 3.0E-35 T 09-03-2017 BV404_RS00130 fc58ddd7fbc5227d672ba5f7f70f986a 467 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 09-03-2017 IPR025944 Sigma-54 interaction domain, conserved site BV404_RS06275 dd859125e415269ab6cb9d1deba8a59b 458 TIGRFAM TIGR00797 matE: MATE efflux family protein 25 422 8.9E-60 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BV404_RS06275 dd859125e415269ab6cb9d1deba8a59b 458 Pfam PF01554 MatE 25 185 3.8E-25 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BV404_RS06275 dd859125e415269ab6cb9d1deba8a59b 458 Pfam PF01554 MatE 252 413 2.0E-17 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BV404_RS06275 dd859125e415269ab6cb9d1deba8a59b 458 PIRSF PIRSF006603 5 458 8.0E-67 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BV404_RS13580 963976e8e79ab4f75c7441d5c03e8902 165 Pfam PF01467 Cytidylyltransferase-like 10 138 2.0E-20 T 09-03-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BV404_RS13580 963976e8e79ab4f75c7441d5c03e8902 165 Gene3D G3DSA:3.40.50.620 8 163 1.8E-53 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS13580 963976e8e79ab4f75c7441d5c03e8902 165 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 9 161 2.9E-58 T 09-03-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 BV404_RS13580 963976e8e79ab4f75c7441d5c03e8902 165 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 8 67 8.3E-20 T 09-03-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BV404_RS13580 963976e8e79ab4f75c7441d5c03e8902 165 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 7 163 35.072 T 09-03-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 BV404_RS13580 963976e8e79ab4f75c7441d5c03e8902 165 SUPERFAMILY SSF52374 8 162 5.63E-45 T 09-03-2017 BV404_RS13580 963976e8e79ab4f75c7441d5c03e8902 165 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 54 78 8.3E-50 T 09-03-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 BV404_RS13580 963976e8e79ab4f75c7441d5c03e8902 165 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 25 46 8.3E-50 T 09-03-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 BV404_RS13580 963976e8e79ab4f75c7441d5c03e8902 165 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 90 106 8.3E-50 T 09-03-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 BV404_RS13580 963976e8e79ab4f75c7441d5c03e8902 165 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 7 25 8.3E-50 T 09-03-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 BV404_RS13580 963976e8e79ab4f75c7441d5c03e8902 165 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 117 139 8.3E-50 T 09-03-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 BV404_RS05290 d5178030765f75f5651b66095f93e557 127 PIRSF PIRSF021239 4 117 4.4E-53 T 09-03-2017 IPR007437 Putative member of DMT superfamily BV404_RS05290 d5178030765f75f5651b66095f93e557 127 Pfam PF04342 Putative member of DMT superfamily (DUF486) 10 114 8.7E-45 T 09-03-2017 IPR007437 Putative member of DMT superfamily BV404_RS03660 049b190718bf0010a1bd65006687687a 361 PIRSF PIRSF001456 3 359 1.6E-142 T 09-03-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BV404_RS03660 049b190718bf0010a1bd65006687687a 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 1.1E-142 T 09-03-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BV404_RS03660 049b190718bf0010a1bd65006687687a 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 37.589 T 09-03-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BV404_RS03660 049b190718bf0010a1bd65006687687a 361 Pfam PF01264 Chorismate synthase 10 345 5.1E-143 T 09-03-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BV404_RS03660 049b190718bf0010a1bd65006687687a 361 Gene3D G3DSA:3.60.150.10 9 352 1.9E-161 T 09-03-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BV404_RS03660 049b190718bf0010a1bd65006687687a 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 09-03-2017 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BV404_RS03660 049b190718bf0010a1bd65006687687a 361 SUPERFAMILY SSF103263 4 356 6.41E-150 T 09-03-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BV404_RS03660 049b190718bf0010a1bd65006687687a 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 09-03-2017 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BV404_RS04725 5bebb2980333c175ddf67f1e0bb8c430 448 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 154 365 1.3E-71 T 09-03-2017 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 BV404_RS04725 5bebb2980333c175ddf67f1e0bb8c430 448 Gene3D G3DSA:3.40.50.300 131 413 1.1E-88 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS04725 5bebb2980333c175ddf67f1e0bb8c430 448 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 356 365 - T 09-03-2017 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 BV404_RS04725 5bebb2980333c175ddf67f1e0bb8c430 448 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 31 444 8.8E-189 T 09-03-2017 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 BV404_RS04725 5bebb2980333c175ddf67f1e0bb8c430 448 SMART SM00382 166 349 0.0018 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS04725 5bebb2980333c175ddf67f1e0bb8c430 448 SUPERFAMILY SSF52540 102 371 1.1E-92 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS04725 5bebb2980333c175ddf67f1e0bb8c430 448 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 12 445 3.7E-165 T 09-03-2017 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 BV404_RS12010 635d044dff6501a3f0114cabd9f6dbbb 271 SUPERFAMILY SSF53474 2 268 3.06E-57 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold BV404_RS12010 635d044dff6501a3f0114cabd9f6dbbb 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 3.4E-6 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 BV404_RS12010 635d044dff6501a3f0114cabd9f6dbbb 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 90 103 3.4E-6 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 BV404_RS12010 635d044dff6501a3f0114cabd9f6dbbb 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 45 60 3.4E-6 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 BV404_RS12010 635d044dff6501a3f0114cabd9f6dbbb 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 212 226 3.4E-6 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 BV404_RS12010 635d044dff6501a3f0114cabd9f6dbbb 271 PRINTS PR00412 Epoxide hydrolase signature 45 60 1.7E-7 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 BV404_RS12010 635d044dff6501a3f0114cabd9f6dbbb 271 PRINTS PR00412 Epoxide hydrolase signature 243 265 1.7E-7 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 BV404_RS12010 635d044dff6501a3f0114cabd9f6dbbb 271 PRINTS PR00412 Epoxide hydrolase signature 104 117 1.7E-7 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 BV404_RS12010 635d044dff6501a3f0114cabd9f6dbbb 271 Gene3D G3DSA:3.40.50.1820 2 267 5.9E-54 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold BV404_RS12010 635d044dff6501a3f0114cabd9f6dbbb 271 Pfam PF00561 alpha/beta hydrolase fold 22 254 1.4E-17 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 BV404_RS07830 32512c21cdbcb7485c890efcebeaa306 227 Gene3D G3DSA:3.40.50.2300 2 123 6.1E-27 T 09-03-2017 BV404_RS07830 32512c21cdbcb7485c890efcebeaa306 227 SUPERFAMILY SSF52172 3 127 1.57E-31 T 09-03-2017 IPR011006 CheY-like superfamily BV404_RS07830 32512c21cdbcb7485c890efcebeaa306 227 Pfam PF00072 Response regulator receiver domain 5 116 7.3E-22 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS07830 32512c21cdbcb7485c890efcebeaa306 227 SMART SM00448 3 116 5.0E-26 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS07830 32512c21cdbcb7485c890efcebeaa306 227 PIRSF PIRSF006171 1 227 6.4E-81 T 09-03-2017 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0001071|GO:0003677|GO:0005737|GO:0009605 BV404_RS07830 32512c21cdbcb7485c890efcebeaa306 227 Pfam PF12431 Transcriptional regulator 132 160 4.8E-9 T 09-03-2017 IPR028141 Transcriptional regulator BV404_RS13510 eb538447cf98bb56735854f9c16e6e9e 303 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 10 303 1.7E-161 T 09-03-2017 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 BV404_RS13510 eb538447cf98bb56735854f9c16e6e9e 303 SUPERFAMILY SSF52402 7 211 1.4E-71 T 09-03-2017 BV404_RS13510 eb538447cf98bb56735854f9c16e6e9e 303 Gene3D G3DSA:3.40.50.620 8 211 1.2E-60 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS13510 eb538447cf98bb56735854f9c16e6e9e 303 Gene3D G3DSA:3.40.50.620 245 254 1.2E-60 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS13510 eb538447cf98bb56735854f9c16e6e9e 303 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 5 303 56.878 T 09-03-2017 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 BV404_RS13510 eb538447cf98bb56735854f9c16e6e9e 303 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 30 258 9.3E-63 T 09-03-2017 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 BV404_RS13510 eb538447cf98bb56735854f9c16e6e9e 303 PIRSF PIRSF002936 1 303 3.6E-158 T 09-03-2017 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 BV404_RS08435 22130f0f0ea482f2f9d72970dea303b4 573 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS08435 22130f0f0ea482f2f9d72970dea303b4 573 SUPERFAMILY SSF52540 334 571 7.72E-71 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS08435 22130f0f0ea482f2f9d72970dea303b4 573 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 6 533 6.8E-137 T 09-03-2017 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0006810|GO:0016021|GO:0042626 BV404_RS08435 22130f0f0ea482f2f9d72970dea303b4 573 Gene3D G3DSA:3.40.50.300 339 568 1.6E-67 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS08435 22130f0f0ea482f2f9d72970dea303b4 573 Gene3D G3DSA:1.20.1560.10 8 322 5.7E-25 T 09-03-2017 BV404_RS08435 22130f0f0ea482f2f9d72970dea303b4 573 Pfam PF00005 ABC transporter 356 502 9.4E-31 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS08435 22130f0f0ea482f2f9d72970dea303b4 573 SUPERFAMILY SSF90123 7 322 2.62E-37 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 BV404_RS08435 22130f0f0ea482f2f9d72970dea303b4 573 SMART SM00382 365 549 4.5E-17 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS07670 ddeff478ce477537db56580e7f2255ea 201 Gene3D G3DSA:3.40.30.10 15 178 4.0E-17 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS07670 ddeff478ce477537db56580e7f2255ea 201 SUPERFAMILY SSF52833 47 171 3.15E-18 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS07670 ddeff478ce477537db56580e7f2255ea 201 Pfam PF00578 AhpC/TSA family 58 164 3.6E-5 T 09-03-2017 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BV404_RS13015 f5209ea5d11c9c1547dadeddf5076ad2 353 Gene3D G3DSA:3.40.50.300 114 275 2.2E-48 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS13015 f5209ea5d11c9c1547dadeddf5076ad2 353 SUPERFAMILY SSF52540 113 338 3.8E-58 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS13015 f5209ea5d11c9c1547dadeddf5076ad2 353 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 40 340 37.461 T 09-03-2017 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 BV404_RS13015 f5209ea5d11c9c1547dadeddf5076ad2 353 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 74 334 3.3E-89 T 09-03-2017 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 BV404_RS13015 f5209ea5d11c9c1547dadeddf5076ad2 353 Gene3D G3DSA:1.10.40.50 276 345 2.9E-24 T 09-03-2017 BV404_RS13015 f5209ea5d11c9c1547dadeddf5076ad2 353 Pfam PF03193 Protein of unknown function, DUF258 99 276 2.1E-57 T 09-03-2017 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 BV404_RS08750 fe442340454d84fd2d74eb96f5c999ae 796 PRINTS PR00344 Bacterial sensor protein C-terminal signature 493 507 1.8E-16 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS08750 fe442340454d84fd2d74eb96f5c999ae 796 PRINTS PR00344 Bacterial sensor protein C-terminal signature 552 565 1.8E-16 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS08750 fe442340454d84fd2d74eb96f5c999ae 796 PRINTS PR00344 Bacterial sensor protein C-terminal signature 528 546 1.8E-16 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS08750 fe442340454d84fd2d74eb96f5c999ae 796 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 521 1.8E-16 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS08750 fe442340454d84fd2d74eb96f5c999ae 796 SMART SM00388 341 406 1.7E-21 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS08750 fe442340454d84fd2d74eb96f5c999ae 796 Gene3D G3DSA:3.40.50.2300 585 704 2.2E-33 T 09-03-2017 BV404_RS08750 fe442340454d84fd2d74eb96f5c999ae 796 SUPERFAMILY SSF47384 329 407 4.12E-18 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS08750 fe442340454d84fd2d74eb96f5c999ae 796 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 454 564 1.1E-28 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS08750 fe442340454d84fd2d74eb96f5c999ae 796 Gene3D G3DSA:3.30.565.10 393 567 1.8E-44 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS08750 fe442340454d84fd2d74eb96f5c999ae 796 SUPERFAMILY SSF55874 395 564 3.01E-43 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS08750 fe442340454d84fd2d74eb96f5c999ae 796 SUPERFAMILY SSF52172 585 712 5.12E-30 T 09-03-2017 IPR011006 CheY-like superfamily BV404_RS08750 fe442340454d84fd2d74eb96f5c999ae 796 Gene3D G3DSA:1.10.287.130 335 392 1.8E-14 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS08750 fe442340454d84fd2d74eb96f5c999ae 796 Pfam PF00512 His Kinase A (phospho-acceptor) domain 341 406 2.2E-17 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS08750 fe442340454d84fd2d74eb96f5c999ae 796 Gene3D G3DSA:3.30.450.20 116 186 5.0E-10 T 09-03-2017 BV404_RS08750 fe442340454d84fd2d74eb96f5c999ae 796 Pfam PF02743 Cache domain 28 197 2.3E-12 T 09-03-2017 IPR033479 Double Cache domain 1 BV404_RS08750 fe442340454d84fd2d74eb96f5c999ae 796 SMART SM00448 587 701 2.8E-25 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS08750 fe442340454d84fd2d74eb96f5c999ae 796 SMART SM00387 453 568 3.6E-36 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS08750 fe442340454d84fd2d74eb96f5c999ae 796 Pfam PF00072 Response regulator receiver domain 589 701 1.6E-20 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS01745 8e515a5fa4290850dc6360986d76770d 298 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 143 155 7.1E-27 T 09-03-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BV404_RS01745 8e515a5fa4290850dc6360986d76770d 298 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 231 250 7.1E-27 T 09-03-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BV404_RS01745 8e515a5fa4290850dc6360986d76770d 298 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 79 95 7.1E-27 T 09-03-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BV404_RS01745 8e515a5fa4290850dc6360986d76770d 298 Gene3D G3DSA:2.170.230.10 153 230 6.1E-20 T 09-03-2017 IPR019766 Peptidase S26A, all-beta subdomain BV404_RS01745 8e515a5fa4290850dc6360986d76770d 298 Gene3D G3DSA:2.10.109.10 231 272 1.4E-56 T 09-03-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain BV404_RS01745 8e515a5fa4290850dc6360986d76770d 298 Gene3D G3DSA:2.10.109.10 75 152 1.4E-56 T 09-03-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain BV404_RS01745 8e515a5fa4290850dc6360986d76770d 298 ProSitePatterns PS00760 Signal peptidases I lysine active site. 145 157 - T 09-03-2017 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 BV404_RS01745 8e515a5fa4290850dc6360986d76770d 298 Pfam PF10502 Signal peptidase, peptidase S26 228 268 1.7E-6 T 09-03-2017 IPR019533 Peptidase S26 BV404_RS01745 8e515a5fa4290850dc6360986d76770d 298 ProSitePatterns PS00501 Signal peptidases I serine active site. 88 95 - T 09-03-2017 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 BV404_RS01745 8e515a5fa4290850dc6360986d76770d 298 Pfam PF00717 Peptidase S24-like 85 160 3.6E-22 T 09-03-2017 IPR019759 Peptidase S24/S26A/S26B BV404_RS01745 8e515a5fa4290850dc6360986d76770d 298 ProSitePatterns PS00761 Signal peptidases I signature 3. 236 249 - T 09-03-2017 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 BV404_RS01745 8e515a5fa4290850dc6360986d76770d 298 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 65 271 4.4E-48 T 09-03-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BV404_RS01745 8e515a5fa4290850dc6360986d76770d 298 SUPERFAMILY SSF51306 77 296 8.11E-71 T 09-03-2017 IPR015927 Peptidase S24/S26A/S26B/S26C BV404_RS07465 b9cc746e877ea58a3da118bde8f79d9c 494 PIRSF PIRSF006615 1 494 2.0E-193 T 09-03-2017 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 BV404_RS07465 b9cc746e877ea58a3da118bde8f79d9c 494 SUPERFAMILY SSF55486 1 493 1.71E-115 T 09-03-2017 BV404_RS07465 b9cc746e877ea58a3da118bde8f79d9c 494 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 10 492 3.9E-89 T 09-03-2017 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 BV404_RS07465 b9cc746e877ea58a3da118bde8f79d9c 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 400 421 5.6E-45 T 09-03-2017 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 BV404_RS07465 b9cc746e877ea58a3da118bde8f79d9c 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 241 260 5.6E-45 T 09-03-2017 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 BV404_RS07465 b9cc746e877ea58a3da118bde8f79d9c 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 145 165 5.6E-45 T 09-03-2017 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 BV404_RS07465 b9cc746e877ea58a3da118bde8f79d9c 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 288 304 5.6E-45 T 09-03-2017 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 BV404_RS07465 b9cc746e877ea58a3da118bde8f79d9c 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 330 349 5.6E-45 T 09-03-2017 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 BV404_RS07465 b9cc746e877ea58a3da118bde8f79d9c 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 261 280 5.6E-45 T 09-03-2017 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 BV404_RS07465 b9cc746e877ea58a3da118bde8f79d9c 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 444 462 5.6E-45 T 09-03-2017 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 BV404_RS02605 310a821b95b12e3950530ab0077bf517 274 SUPERFAMILY SSF52540 5 234 8.95E-67 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS02605 310a821b95b12e3950530ab0077bf517 274 Gene3D G3DSA:3.40.50.300 3 210 1.9E-66 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS02605 310a821b95b12e3950530ab0077bf517 274 SMART SM00382 33 215 2.9E-20 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS02605 310a821b95b12e3950530ab0077bf517 274 Pfam PF00005 ABC transporter 24 164 6.5E-36 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS02605 310a821b95b12e3950530ab0077bf517 274 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS01600 8764bd72cf825cb5ca1e99b16a93bc63 468 ProSitePatterns PS00450 Aconitase family signature 1. 341 357 - T 09-03-2017 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 BV404_RS01600 8764bd72cf825cb5ca1e99b16a93bc63 468 ProSitePatterns PS01244 Aconitase family signature 2. 401 414 - T 09-03-2017 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 BV404_RS01600 8764bd72cf825cb5ca1e99b16a93bc63 468 Gene3D G3DSA:3.30.499.10 337 468 3.3E-64 T 09-03-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 BV404_RS01600 8764bd72cf825cb5ca1e99b16a93bc63 468 Gene3D G3DSA:3.40.1060.10 168 282 1.6E-40 T 09-03-2017 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 BV404_RS01600 8764bd72cf825cb5ca1e99b16a93bc63 468 PRINTS PR00415 Aconitase family signature 197 210 3.2E-50 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 BV404_RS01600 8764bd72cf825cb5ca1e99b16a93bc63 468 PRINTS PR00415 Aconitase family signature 288 302 3.2E-50 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 BV404_RS01600 8764bd72cf825cb5ca1e99b16a93bc63 468 PRINTS PR00415 Aconitase family signature 211 224 3.2E-50 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 BV404_RS01600 8764bd72cf825cb5ca1e99b16a93bc63 468 PRINTS PR00415 Aconitase family signature 345 356 3.2E-50 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 BV404_RS01600 8764bd72cf825cb5ca1e99b16a93bc63 468 PRINTS PR00415 Aconitase family signature 135 150 3.2E-50 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 BV404_RS01600 8764bd72cf825cb5ca1e99b16a93bc63 468 PRINTS PR00415 Aconitase family signature 84 97 3.2E-50 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 BV404_RS01600 8764bd72cf825cb5ca1e99b16a93bc63 468 PRINTS PR00415 Aconitase family signature 110 118 3.2E-50 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 BV404_RS01600 8764bd72cf825cb5ca1e99b16a93bc63 468 PRINTS PR00415 Aconitase family signature 401 414 3.2E-50 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 BV404_RS01600 8764bd72cf825cb5ca1e99b16a93bc63 468 PRINTS PR00415 Aconitase family signature 121 134 3.2E-50 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 BV404_RS01600 8764bd72cf825cb5ca1e99b16a93bc63 468 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 4 467 1.5E-266 T 09-03-2017 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 BV404_RS01600 8764bd72cf825cb5ca1e99b16a93bc63 468 SUPERFAMILY SSF53732 4 467 1.18E-165 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 BV404_RS01600 8764bd72cf825cb5ca1e99b16a93bc63 468 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 3 468 61.06 T 09-03-2017 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 BV404_RS01600 8764bd72cf825cb5ca1e99b16a93bc63 468 Pfam PF00330 Aconitase family (aconitate hydratase) 9 459 1.1E-156 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 BV404_RS01600 8764bd72cf825cb5ca1e99b16a93bc63 468 Gene3D G3DSA:3.30.499.10 4 160 2.7E-22 T 09-03-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 BV404_RS07095 e38e41f6aebbffbe3a727e1ff20721ec 256 Gene3D G3DSA:1.10.3720.10 3 254 6.1E-58 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS07095 e38e41f6aebbffbe3a727e1ff20721ec 256 SUPERFAMILY SSF161098 5 254 2.43E-55 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS07095 e38e41f6aebbffbe3a727e1ff20721ec 256 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 247 5.6E-18 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS11595 a0097b622d94a8d6cc1ba042edf3637d 288 Pfam PF03466 LysR substrate binding domain 90 275 8.7E-20 T 09-03-2017 IPR005119 LysR, substrate-binding BV404_RS11595 a0097b622d94a8d6cc1ba042edf3637d 288 SUPERFAMILY SSF46785 4 85 9.32E-12 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS11595 a0097b622d94a8d6cc1ba042edf3637d 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 8.9E-13 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS11595 a0097b622d94a8d6cc1ba042edf3637d 288 SUPERFAMILY SSF53850 90 279 5.79E-23 T 09-03-2017 BV404_RS11595 a0097b622d94a8d6cc1ba042edf3637d 288 Gene3D G3DSA:3.40.190.10 91 166 4.7E-8 T 09-03-2017 BV404_RS11595 a0097b622d94a8d6cc1ba042edf3637d 288 Gene3D G3DSA:1.10.10.10 3 79 6.0E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS02350 44ea3283b666b709ea811e5975c692b8 239 SUPERFAMILY SSF53335 38 189 1.21E-32 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS02350 44ea3283b666b709ea811e5975c692b8 239 Gene3D G3DSA:3.40.50.150 30 226 2.2E-49 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS02350 44ea3283b666b709ea811e5975c692b8 239 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 114 120 - T 09-03-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BV404_RS02350 44ea3283b666b709ea811e5975c692b8 239 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 9 239 53.477 T 09-03-2017 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 KEGG: 00340+2.1.1.22 BV404_RS02350 44ea3283b666b709ea811e5975c692b8 239 Pfam PF05175 Methyltransferase small domain 43 130 1.7E-18 T 09-03-2017 IPR007848 Methyltransferase small domain GO:0008168 BV404_RS01265 ae8cd3d57902ab5ed1993a93689eda23 486 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 464 471 - T 09-03-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 BV404_RS01265 ae8cd3d57902ab5ed1993a93689eda23 486 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 483 7.0E-155 T 09-03-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 BV404_RS01265 ae8cd3d57902ab5ed1993a93689eda23 486 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 373 392 - T 09-03-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 BV404_RS01265 ae8cd3d57902ab5ed1993a93689eda23 486 Pfam PF04963 Sigma-54 factor, core binding domain 125 314 4.2E-60 T 09-03-2017 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 BV404_RS01265 ae8cd3d57902ab5ed1993a93689eda23 486 PIRSF PIRSF000774 1 486 6.5E-154 T 09-03-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 BV404_RS01265 ae8cd3d57902ab5ed1993a93689eda23 486 PRINTS PR00045 Sigma-54 factor signature 197 214 2.3E-30 T 09-03-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 BV404_RS01265 ae8cd3d57902ab5ed1993a93689eda23 486 PRINTS PR00045 Sigma-54 factor signature 459 477 2.3E-30 T 09-03-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 BV404_RS01265 ae8cd3d57902ab5ed1993a93689eda23 486 PRINTS PR00045 Sigma-54 factor signature 385 397 2.3E-30 T 09-03-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 BV404_RS01265 ae8cd3d57902ab5ed1993a93689eda23 486 PRINTS PR00045 Sigma-54 factor signature 401 412 2.3E-30 T 09-03-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 BV404_RS01265 ae8cd3d57902ab5ed1993a93689eda23 486 Pfam PF04552 Sigma-54, DNA binding domain 326 484 1.1E-72 T 09-03-2017 IPR007634 RNA polymerase sigma factor 54, DNA-binding BV404_RS01265 ae8cd3d57902ab5ed1993a93689eda23 486 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 49 2.7E-17 T 09-03-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 BV404_RS05425 a6fb29e5e2b4b4d3b1b7ff9d437868fe 314 SUPERFAMILY SSF47616 164 312 2.92E-36 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like BV404_RS05425 a6fb29e5e2b4b4d3b1b7ff9d437868fe 314 Gene3D G3DSA:3.40.30.10 30 166 3.1E-20 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS05425 a6fb29e5e2b4b4d3b1b7ff9d437868fe 314 SUPERFAMILY SSF52833 31 150 3.22E-15 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS05425 a6fb29e5e2b4b4d3b1b7ff9d437868fe 314 PIRSF PIRSF015753 4 312 9.5E-136 T 09-03-2017 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 BV404_RS05425 a6fb29e5e2b4b4d3b1b7ff9d437868fe 314 Pfam PF13409 Glutathione S-transferase, N-terminal domain 56 146 5.4E-22 T 09-03-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 BV404_RS05425 a6fb29e5e2b4b4d3b1b7ff9d437868fe 314 Pfam PF13410 Glutathione S-transferase, C-terminal domain 192 263 7.0E-13 T 09-03-2017 BV404_RS05425 a6fb29e5e2b4b4d3b1b7ff9d437868fe 314 Gene3D G3DSA:1.20.1050.10 167 276 3.4E-27 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like BV404_RS05860 67ee737d58218666eea996347e6103e6 591 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 558 1.8E-105 T 09-03-2017 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BV404_RS05860 67ee737d58218666eea996347e6103e6 591 SUPERFAMILY SSF55681 108 287 4.79E-103 T 09-03-2017 BV404_RS05860 67ee737d58218666eea996347e6103e6 591 SUPERFAMILY SSF55681 420 582 4.79E-103 T 09-03-2017 BV404_RS05860 67ee737d58218666eea996347e6103e6 591 Gene3D G3DSA:3.30.930.10 414 584 4.1E-109 T 09-03-2017 BV404_RS05860 67ee737d58218666eea996347e6103e6 591 Gene3D G3DSA:3.30.930.10 131 275 4.1E-109 T 09-03-2017 BV404_RS05860 67ee737d58218666eea996347e6103e6 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 2.7E-26 T 09-03-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BV404_RS05860 67ee737d58218666eea996347e6103e6 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 2.7E-26 T 09-03-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BV404_RS05860 67ee737d58218666eea996347e6103e6 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 2.7E-26 T 09-03-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BV404_RS05860 67ee737d58218666eea996347e6103e6 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 2.7E-26 T 09-03-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BV404_RS05860 67ee737d58218666eea996347e6103e6 591 SUPERFAMILY SSF50249 1 105 1.52E-33 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS05860 67ee737d58218666eea996347e6103e6 591 SUPERFAMILY SSF55261 288 419 5.23E-47 T 09-03-2017 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 BV404_RS05860 67ee737d58218666eea996347e6103e6 591 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 1.9E-15 T 09-03-2017 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 BV404_RS05860 67ee737d58218666eea996347e6103e6 591 Gene3D G3DSA:2.40.50.140 1 106 3.9E-39 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS05860 67ee737d58218666eea996347e6103e6 591 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 1 563 36.67 T 09-03-2017 BV404_RS05860 67ee737d58218666eea996347e6103e6 591 Pfam PF02938 GAD domain 307 405 8.2E-32 T 09-03-2017 IPR029351 GAD domain Reactome: R-HSA-379726 BV404_RS05860 67ee737d58218666eea996347e6103e6 591 Gene3D G3DSA:3.30.1360.30 276 413 2.1E-49 T 09-03-2017 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 BV404_RS05860 67ee737d58218666eea996347e6103e6 591 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 583 7.6E-264 T 09-03-2017 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 Reactome: R-HSA-379726 BV404_RS00720 797e1e0e2a1e2287eeaecd8ba4d190d3 263 PIRSF PIRSF000728 1 263 8.0E-70 T 09-03-2017 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BV404_RS00720 797e1e0e2a1e2287eeaecd8ba4d190d3 263 Gene3D G3DSA:3.40.1160.10 7 260 2.0E-75 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase BV404_RS00720 797e1e0e2a1e2287eeaecd8ba4d190d3 263 SUPERFAMILY SSF53633 6 262 2.36E-58 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase BV404_RS00720 797e1e0e2a1e2287eeaecd8ba4d190d3 263 Pfam PF00696 Amino acid kinase family 9 238 7.8E-36 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase BV404_RS00720 797e1e0e2a1e2287eeaecd8ba4d190d3 263 TIGRFAM TIGR00761 argB: acetylglutamate kinase 9 234 1.3E-65 T 09-03-2017 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BV404_RS00720 797e1e0e2a1e2287eeaecd8ba4d190d3 263 Hamap MF_00082_B Acetylglutamate kinase [argB]. 5 262 26.433 T 09-03-2017 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BV404_RS00830 e8ad0ed89cb325624046b0bbafb8a00e 403 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 16 399 8.1E-150 T 09-03-2017 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 BV404_RS00830 e8ad0ed89cb325624046b0bbafb8a00e 403 SUPERFAMILY SSF53383 16 399 3.63E-130 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase BV404_RS00830 e8ad0ed89cb325624046b0bbafb8a00e 403 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 222 259 - T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BV404_RS00830 e8ad0ed89cb325624046b0bbafb8a00e 403 Gene3D G3DSA:3.90.1150.10 14 59 9.2E-37 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 BV404_RS00830 e8ad0ed89cb325624046b0bbafb8a00e 403 Gene3D G3DSA:3.90.1150.10 306 400 9.2E-37 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 BV404_RS00830 e8ad0ed89cb325624046b0bbafb8a00e 403 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 13 400 45.794 T 09-03-2017 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 BV404_RS00830 e8ad0ed89cb325624046b0bbafb8a00e 403 Pfam PF00202 Aminotransferase class-III 22 399 1.9E-125 T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BV404_RS00830 e8ad0ed89cb325624046b0bbafb8a00e 403 Gene3D G3DSA:3.40.640.10 60 303 5.0E-91 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 BV404_RS00830 e8ad0ed89cb325624046b0bbafb8a00e 403 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 7 403 1.5E-208 T 09-03-2017 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 BV404_RS05910 9f06483d0572d326db71701f0ac317b7 394 PIRSF PIRSF000014 1 394 2.5E-167 T 09-03-2017 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 BV404_RS05910 9f06483d0572d326db71701f0ac317b7 394 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 16 187 1.7E-72 T 09-03-2017 IPR005126 NapC/NirT cytochrome c, N-terminal BV404_RS05910 9f06483d0572d326db71701f0ac317b7 394 TIGRFAM TIGR02162 torC: trimethylamine-N-oxide reductase c-type cytochrome TorC 7 394 1.2E-196 T 09-03-2017 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 BV404_RS05910 9f06483d0572d326db71701f0ac317b7 394 Gene3D G3DSA:1.10.3820.10 12 189 1.0E-28 T 09-03-2017 BV404_RS05910 9f06483d0572d326db71701f0ac317b7 394 Gene3D G3DSA:1.10.3820.10 339 345 1.0E-28 T 09-03-2017 BV404_RS05910 9f06483d0572d326db71701f0ac317b7 394 SUPERFAMILY SSF48695 12 187 4.53E-60 T 09-03-2017 IPR011031 Multihaem cytochrome BV404_RS07290 02a90ee12b40d752d5a0b79ce9e4a178 57 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 51 2.0E-21 T 09-03-2017 IPR007040 Ribosome modulation factor BV404_RS07290 02a90ee12b40d752d5a0b79ce9e4a178 57 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 30.144 T 09-03-2017 IPR007040 Ribosome modulation factor BV404_RS07290 02a90ee12b40d752d5a0b79ce9e4a178 57 Pfam PF04957 Ribosome modulation factor 1 54 1.4E-28 T 09-03-2017 IPR007040 Ribosome modulation factor BV404_RS07290 02a90ee12b40d752d5a0b79ce9e4a178 57 Gene3D G3DSA:1.10.10.620 1 56 6.5E-28 T 09-03-2017 IPR023200 Ribosome modulation factor-like domain BV404_RS10485 6dfa4b50fdd9f2057109075ecff09406 111 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 36 104 9.9E-16 T 09-03-2017 IPR018660 C-type lysozyme, inhibitor BV404_RS10485 6dfa4b50fdd9f2057109075ecff09406 111 SUPERFAMILY SSF141488 34 110 1.28E-11 T 09-03-2017 IPR018660 C-type lysozyme, inhibitor BV404_RS09875 7f4c1fa7d63f0e97a7125ebdf915b51f 264 SUPERFAMILY SSF55120 1 256 9.64E-95 T 09-03-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 BV404_RS09875 7f4c1fa7d63f0e97a7125ebdf915b51f 264 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 238 1.6E-75 T 09-03-2017 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 BV404_RS09875 7f4c1fa7d63f0e97a7125ebdf915b51f 264 Pfam PF01416 tRNA pseudouridine synthase 145 244 4.7E-29 T 09-03-2017 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 BV404_RS09875 7f4c1fa7d63f0e97a7125ebdf915b51f 264 Pfam PF01416 tRNA pseudouridine synthase 8 103 6.9E-11 T 09-03-2017 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 BV404_RS09875 7f4c1fa7d63f0e97a7125ebdf915b51f 264 Gene3D G3DSA:3.30.70.660 106 241 4.4E-47 T 09-03-2017 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 BV404_RS09875 7f4c1fa7d63f0e97a7125ebdf915b51f 264 PIRSF PIRSF001430 1 253 1.9E-77 T 09-03-2017 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 BV404_RS09875 7f4c1fa7d63f0e97a7125ebdf915b51f 264 Gene3D G3DSA:3.30.70.580 1 104 3.8E-39 T 09-03-2017 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 BV404_RS09875 7f4c1fa7d63f0e97a7125ebdf915b51f 264 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 243 35.568 T 09-03-2017 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 BV404_RS05880 3633c66fa17f0eaf179696a1ad1cc3b1 296 Gene3D G3DSA:3.40.190.10 84 181 3.2E-9 T 09-03-2017 BV404_RS05880 3633c66fa17f0eaf179696a1ad1cc3b1 296 SUPERFAMILY SSF46785 3 88 6.53E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS05880 3633c66fa17f0eaf179696a1ad1cc3b1 296 Gene3D G3DSA:1.10.10.10 2 83 2.2E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS05880 3633c66fa17f0eaf179696a1ad1cc3b1 296 Pfam PF03466 LysR substrate binding domain 89 289 5.3E-21 T 09-03-2017 IPR005119 LysR, substrate-binding BV404_RS05880 3633c66fa17f0eaf179696a1ad1cc3b1 296 SUPERFAMILY SSF53850 92 293 1.3E-27 T 09-03-2017 BV404_RS05880 3633c66fa17f0eaf179696a1ad1cc3b1 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.3E-17 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS05880 3633c66fa17f0eaf179696a1ad1cc3b1 296 Gene3D G3DSA:3.40.190.10 182 253 2.1E-11 T 09-03-2017 BV404_RS12655 61c04182b4c21bbb7225a40edaff2fb5 216 Gene3D G3DSA:1.10.10.10 150 213 6.1E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS12655 61c04182b4c21bbb7225a40edaff2fb5 216 SUPERFAMILY SSF46894 141 212 8.5E-19 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BV404_RS12655 61c04182b4c21bbb7225a40edaff2fb5 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 2.7E-11 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BV404_RS12655 61c04182b4c21bbb7225a40edaff2fb5 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 2.7E-11 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BV404_RS12655 61c04182b4c21bbb7225a40edaff2fb5 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 2.7E-11 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BV404_RS12655 61c04182b4c21bbb7225a40edaff2fb5 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 156 210 6.7E-18 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BV404_RS12655 61c04182b4c21bbb7225a40edaff2fb5 216 SMART SM00421 153 210 7.7E-19 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BV404_RS00895 2a77fef2419f7a51042e821d4642911d 189 SUPERFAMILY SSF54534 2 140 2.55E-33 T 09-03-2017 BV404_RS00895 2a77fef2419f7a51042e821d4642911d 189 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 136 9.9E-11 T 09-03-2017 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 BV404_RS00895 2a77fef2419f7a51042e821d4642911d 189 Gene3D G3DSA:3.10.50.40 126 141 5.5E-18 T 09-03-2017 BV404_RS00895 2a77fef2419f7a51042e821d4642911d 189 Gene3D G3DSA:3.10.50.40 2 80 5.5E-18 T 09-03-2017 BV404_RS02150 4ba46626e7b78f6ea7063f02492197c4 361 Pfam PF01594 Domain of unknown function DUF20 14 347 9.9E-51 T 09-03-2017 IPR002549 Transmembrane protein TqsA-like BV404_RS14280 6145c73e213dbe83f751af4f1caeb363 723 Gene3D G3DSA:3.40.50.720 311 498 1.9E-58 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS14280 6145c73e213dbe83f751af4f1caeb363 723 SUPERFAMILY SSF48179 626 715 2.98E-24 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 BV404_RS14280 6145c73e213dbe83f751af4f1caeb363 723 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 715 0.0 T 09-03-2017 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 BV404_RS14280 6145c73e213dbe83f751af4f1caeb363 723 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 716 52.547 T 09-03-2017 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 BV404_RS14280 6145c73e213dbe83f751af4f1caeb363 723 SUPERFAMILY SSF51735 315 496 8.41E-55 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS14280 6145c73e213dbe83f751af4f1caeb363 723 Gene3D G3DSA:1.10.1040.10 633 719 1.3E-19 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BV404_RS14280 6145c73e213dbe83f751af4f1caeb363 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 628 706 5.1E-5 T 09-03-2017 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 BV404_RS14280 6145c73e213dbe83f751af4f1caeb363 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 593 2.6E-26 T 09-03-2017 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 BV404_RS14280 6145c73e213dbe83f751af4f1caeb363 723 SUPERFAMILY SSF48179 496 602 2.89E-28 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 BV404_RS14280 6145c73e213dbe83f751af4f1caeb363 723 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 518 - T 09-03-2017 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 BV404_RS14280 6145c73e213dbe83f751af4f1caeb363 723 Gene3D G3DSA:1.10.1040.10 499 593 4.6E-22 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BV404_RS14280 6145c73e213dbe83f751af4f1caeb363 723 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 207 4.8E-39 T 09-03-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 BV404_RS14280 6145c73e213dbe83f751af4f1caeb363 723 Gene3D G3DSA:3.90.226.10 4 201 3.9E-57 T 09-03-2017 IPR029045 ClpP/crotonase-like domain BV404_RS14280 6145c73e213dbe83f751af4f1caeb363 723 Gene3D G3DSA:3.90.226.10 235 296 3.9E-57 T 09-03-2017 IPR029045 ClpP/crotonase-like domain BV404_RS14280 6145c73e213dbe83f751af4f1caeb363 723 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 317 495 4.0E-59 T 09-03-2017 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 BV404_RS14280 6145c73e213dbe83f751af4f1caeb363 723 SUPERFAMILY SSF52096 2 305 1.99E-65 T 09-03-2017 IPR029045 ClpP/crotonase-like domain BV404_RS14705 9810c71c7fbb22f31b0977179b0f8b2e 153 SUPERFAMILY SSF88697 1 148 7.1E-61 T 09-03-2017 IPR015947 PUA-like domain BV404_RS14705 9810c71c7fbb22f31b0977179b0f8b2e 153 Pfam PF01878 EVE domain 2 148 3.8E-56 T 09-03-2017 IPR002740 EVE domain BV404_RS14705 9810c71c7fbb22f31b0977179b0f8b2e 153 Gene3D G3DSA:3.10.590.10 1 148 9.1E-33 T 09-03-2017 IPR002740 EVE domain BV404_RS14120 b366561d7f0667ae6c21b750fd5c8d9f 805 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 733 794 9.5E-31 T 09-03-2017 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 BV404_RS14120 b366561d7f0667ae6c21b750fd5c8d9f 805 PRINTS PR01159 DNA gyrase subunit B signature 180 195 2.7E-87 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BV404_RS14120 b366561d7f0667ae6c21b750fd5c8d9f 805 PRINTS PR01159 DNA gyrase subunit B signature 758 770 2.7E-87 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BV404_RS14120 b366561d7f0667ae6c21b750fd5c8d9f 805 PRINTS PR01159 DNA gyrase subunit B signature 313 329 2.7E-87 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BV404_RS14120 b366561d7f0667ae6c21b750fd5c8d9f 805 PRINTS PR01159 DNA gyrase subunit B signature 5 15 2.7E-87 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BV404_RS14120 b366561d7f0667ae6c21b750fd5c8d9f 805 PRINTS PR01159 DNA gyrase subunit B signature 220 242 2.7E-87 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BV404_RS14120 b366561d7f0667ae6c21b750fd5c8d9f 805 PRINTS PR01159 DNA gyrase subunit B signature 471 480 2.7E-87 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BV404_RS14120 b366561d7f0667ae6c21b750fd5c8d9f 805 PRINTS PR01159 DNA gyrase subunit B signature 195 208 2.7E-87 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BV404_RS14120 b366561d7f0667ae6c21b750fd5c8d9f 805 PRINTS PR01159 DNA gyrase subunit B signature 243 261 2.7E-87 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BV404_RS14120 b366561d7f0667ae6c21b750fd5c8d9f 805 PRINTS PR01159 DNA gyrase subunit B signature 361 375 2.7E-87 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BV404_RS14120 b366561d7f0667ae6c21b750fd5c8d9f 805 PRINTS PR01159 DNA gyrase subunit B signature 375 395 2.7E-87 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BV404_RS14120 b366561d7f0667ae6c21b750fd5c8d9f 805 PRINTS PR01159 DNA gyrase subunit B signature 774 790 2.7E-87 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BV404_RS14120 b366561d7f0667ae6c21b750fd5c8d9f 805 SUPERFAMILY SSF55874 4 213 8.25E-75 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS14120 b366561d7f0667ae6c21b750fd5c8d9f 805 Pfam PF01751 Toprim domain 420 532 1.0E-18 T 09-03-2017 IPR006171 Toprim domain BV404_RS14120 b366561d7f0667ae6c21b750fd5c8d9f 805 Gene3D G3DSA:3.30.230.10 220 393 3.3E-77 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BV404_RS14120 b366561d7f0667ae6c21b750fd5c8d9f 805 ProSitePatterns PS00177 DNA topoisomerase II signature. 423 431 - T 09-03-2017 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BV404_RS14120 b366561d7f0667ae6c21b750fd5c8d9f 805 PRINTS PR00418 DNA topoisomerase II family signature 269 282 4.8E-71 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BV404_RS14120 b366561d7f0667ae6c21b750fd5c8d9f 805 PRINTS PR00418 DNA topoisomerase II family signature 35 50 4.8E-71 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BV404_RS14120 b366561d7f0667ae6c21b750fd5c8d9f 805 PRINTS PR00418 DNA topoisomerase II family signature 113 127 4.8E-71 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BV404_RS14120 b366561d7f0667ae6c21b750fd5c8d9f 805 PRINTS PR00418 DNA topoisomerase II family signature 488 504 4.8E-71 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BV404_RS14120 b366561d7f0667ae6c21b750fd5c8d9f 805 PRINTS PR00418 DNA topoisomerase II family signature 737 753 4.8E-71 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BV404_RS14120 b366561d7f0667ae6c21b750fd5c8d9f 805 PRINTS PR00418 DNA topoisomerase II family signature 506 523 4.8E-71 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BV404_RS14120 b366561d7f0667ae6c21b750fd5c8d9f 805 PRINTS PR00418 DNA topoisomerase II family signature 70 83 4.8E-71 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BV404_RS14120 b366561d7f0667ae6c21b750fd5c8d9f 805 PRINTS PR00418 DNA topoisomerase II family signature 526 538 4.8E-71 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BV404_RS14120 b366561d7f0667ae6c21b750fd5c8d9f 805 PRINTS PR00418 DNA topoisomerase II family signature 421 435 4.8E-71 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BV404_RS14120 b366561d7f0667ae6c21b750fd5c8d9f 805 SUPERFAMILY SSF54211 221 393 4.55E-59 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold BV404_RS14120 b366561d7f0667ae6c21b750fd5c8d9f 805 Gene3D G3DSA:3.30.565.10 15 214 3.6E-92 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS14120 b366561d7f0667ae6c21b750fd5c8d9f 805 SMART SM00387 31 175 4.3E-27 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS14120 b366561d7f0667ae6c21b750fd5c8d9f 805 Gene3D G3DSA:3.40.50.670 405 551 9.6E-102 T 09-03-2017 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BV404_RS14120 b366561d7f0667ae6c21b750fd5c8d9f 805 Gene3D G3DSA:3.40.50.670 719 787 9.6E-102 T 09-03-2017 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BV404_RS14120 b366561d7f0667ae6c21b750fd5c8d9f 805 Pfam PF00204 DNA gyrase B 221 391 5.6E-61 T 09-03-2017 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BV404_RS14120 b366561d7f0667ae6c21b750fd5c8d9f 805 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 805 108.273 T 09-03-2017 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BV404_RS14120 b366561d7f0667ae6c21b750fd5c8d9f 805 SUPERFAMILY SSF56719 395 561 2.46E-88 T 09-03-2017 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 BV404_RS14120 b366561d7f0667ae6c21b750fd5c8d9f 805 SUPERFAMILY SSF56719 731 796 2.46E-88 T 09-03-2017 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 BV404_RS14120 b366561d7f0667ae6c21b750fd5c8d9f 805 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 805 0.0 T 09-03-2017 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BV404_RS14120 b366561d7f0667ae6c21b750fd5c8d9f 805 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 174 1.1E-23 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS14120 b366561d7f0667ae6c21b750fd5c8d9f 805 SMART SM00433 35 798 5.4E-276 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BV404_RS12225 84e374176c46bea8b63d63ec326e5365 645 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 156 2.0E-26 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 BV404_RS12225 84e374176c46bea8b63d63ec326e5365 645 Gene3D G3DSA:2.170.130.10 24 159 1.1E-39 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 BV404_RS12225 84e374176c46bea8b63d63ec326e5365 645 Gene3D G3DSA:2.40.170.20 160 645 4.7E-96 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 BV404_RS12225 84e374176c46bea8b63d63ec326e5365 645 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 628 645 - T 09-03-2017 IPR010917 TonB-dependent receptor, conserved site BV404_RS12225 84e374176c46bea8b63d63ec326e5365 645 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 40 - T 09-03-2017 IPR010916 TonB box, conserved site BV404_RS12225 84e374176c46bea8b63d63ec326e5365 645 Pfam PF00593 TonB dependent receptor 392 643 1.1E-35 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 BV404_RS12225 84e374176c46bea8b63d63ec326e5365 645 SUPERFAMILY SSF56935 25 645 1.63E-119 T 09-03-2017 BV404_RS12545 a600be1b3c8675af6c68db1da1efa686 188 TIGRFAM TIGR00172 maf: septum formation protein Maf 4 184 2.9E-57 T 09-03-2017 IPR003697 Maf-like protein GO:0005737 BV404_RS12545 a600be1b3c8675af6c68db1da1efa686 188 SUPERFAMILY SSF52972 3 186 6.54E-63 T 09-03-2017 IPR029001 Inosine triphosphate pyrophosphatase-like BV404_RS12545 a600be1b3c8675af6c68db1da1efa686 188 PIRSF PIRSF006305 1 188 1.2E-55 T 09-03-2017 IPR003697 Maf-like protein GO:0005737 BV404_RS12545 a600be1b3c8675af6c68db1da1efa686 188 Gene3D G3DSA:3.90.950.10 5 187 3.8E-70 T 09-03-2017 IPR029001 Inosine triphosphate pyrophosphatase-like BV404_RS12545 a600be1b3c8675af6c68db1da1efa686 188 Hamap MF_00528 Septum formation protein Maf [maf]. 5 188 30.042 T 09-03-2017 IPR003697 Maf-like protein GO:0005737 BV404_RS12545 a600be1b3c8675af6c68db1da1efa686 188 Pfam PF02545 Maf-like protein 5 186 4.7E-60 T 09-03-2017 IPR003697 Maf-like protein GO:0005737 BV404_RS08895 9faa3fd6ac99000f9eb1dc3d3226ceb7 225 Gene3D G3DSA:1.10.3720.10 13 217 2.8E-43 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS08895 9faa3fd6ac99000f9eb1dc3d3226ceb7 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 112 1.0E-23 T 09-03-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 BV404_RS08895 9faa3fd6ac99000f9eb1dc3d3226ceb7 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 210 7.6E-19 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS08895 9faa3fd6ac99000f9eb1dc3d3226ceb7 225 SUPERFAMILY SSF161098 12 203 1.96E-42 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS06250 d239a84142e24b5635ed3ef191904d98 578 Gene3D G3DSA:3.40.50.300 235 363 1.3E-21 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS06250 d239a84142e24b5635ed3ef191904d98 578 SUPERFAMILY SSF52540 48 188 8.3E-39 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS06250 d239a84142e24b5635ed3ef191904d98 578 SUPERFAMILY SSF52540 236 362 8.3E-39 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS06250 d239a84142e24b5635ed3ef191904d98 578 SMART SM00487 1 178 5.1E-14 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain BV404_RS06250 d239a84142e24b5635ed3ef191904d98 578 SUPERFAMILY SSF57829 425 465 2.38E-6 T 09-03-2017 IPR011332 Zinc-binding ribosomal protein GO:0006412 BV404_RS06250 d239a84142e24b5635ed3ef191904d98 578 SMART SM00490 262 344 1.6E-10 T 09-03-2017 IPR001650 Helicase, C-terminal BV404_RS06250 d239a84142e24b5635ed3ef191904d98 578 Pfam PF04851 Type III restriction enzyme, res subunit 2 154 1.5E-23 T 09-03-2017 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 BV404_RS06250 d239a84142e24b5635ed3ef191904d98 578 Pfam PF00271 Helicase conserved C-terminal domain 239 343 6.1E-14 T 09-03-2017 IPR001650 Helicase, C-terminal BV404_RS06250 d239a84142e24b5635ed3ef191904d98 578 Gene3D G3DSA:3.40.50.300 2 154 1.0E-31 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS04390 7903ffb4418bff1314e212d5d135f6d8 274 Gene3D G3DSA:1.10.10.10 21 98 3.8E-10 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS04390 7903ffb4418bff1314e212d5d135f6d8 274 Pfam PF00486 Transcriptional regulatory protein, C terminal 26 96 2.3E-10 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BV404_RS04390 7903ffb4418bff1314e212d5d135f6d8 274 SMART SM00862 23 97 8.1E-4 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BV404_RS04390 7903ffb4418bff1314e212d5d135f6d8 274 SUPERFAMILY SSF46894 16 97 9.07E-12 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BV404_RS10135 867611eb10bf011a2f60ae1982eeb966 392 Gene3D G3DSA:3.40.710.10 30 282 1.9E-98 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like BV404_RS10135 867611eb10bf011a2f60ae1982eeb966 392 SUPERFAMILY SSF69189 283 375 6.87E-29 T 09-03-2017 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BV404_RS10135 867611eb10bf011a2f60ae1982eeb966 392 SMART SM00936 283 373 1.8E-38 T 09-03-2017 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BV404_RS10135 867611eb10bf011a2f60ae1982eeb966 392 SUPERFAMILY SSF56601 13 283 2.95E-85 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like BV404_RS10135 867611eb10bf011a2f60ae1982eeb966 392 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 33 263 6.0E-96 T 09-03-2017 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 BV404_RS10135 867611eb10bf011a2f60ae1982eeb966 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 122 139 2.8E-17 T 09-03-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 BV404_RS10135 867611eb10bf011a2f60ae1982eeb966 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 149 162 2.8E-17 T 09-03-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 BV404_RS10135 867611eb10bf011a2f60ae1982eeb966 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 66 77 2.8E-17 T 09-03-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 BV404_RS10135 867611eb10bf011a2f60ae1982eeb966 392 Gene3D G3DSA:2.60.410.10 283 373 4.7E-33 T 09-03-2017 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BV404_RS10135 867611eb10bf011a2f60ae1982eeb966 392 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 283 373 2.2E-27 T 09-03-2017 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BV404_RS11485 75b84894d2171a6280b019c89d0e6eb6 318 SUPERFAMILY SSF54211 3 191 8.35E-34 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold BV404_RS11485 75b84894d2171a6280b019c89d0e6eb6 318 Hamap MF_00384 Homoserine kinase [thrB]. 3 313 29.898 T 09-03-2017 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 BV404_RS11485 75b84894d2171a6280b019c89d0e6eb6 318 Pfam PF00288 GHMP kinases N terminal domain 90 156 1.4E-13 T 09-03-2017 IPR006204 GHMP kinase N-terminal domain GO:0005524 BV404_RS11485 75b84894d2171a6280b019c89d0e6eb6 318 PRINTS PR00958 Homoserine kinase signature 181 198 9.3E-31 T 09-03-2017 BV404_RS11485 75b84894d2171a6280b019c89d0e6eb6 318 PRINTS PR00958 Homoserine kinase signature 260 275 9.3E-31 T 09-03-2017 BV404_RS11485 75b84894d2171a6280b019c89d0e6eb6 318 PRINTS PR00958 Homoserine kinase signature 10 25 9.3E-31 T 09-03-2017 BV404_RS11485 75b84894d2171a6280b019c89d0e6eb6 318 PRINTS PR00958 Homoserine kinase signature 143 156 9.3E-31 T 09-03-2017 BV404_RS11485 75b84894d2171a6280b019c89d0e6eb6 318 PRINTS PR00958 Homoserine kinase signature 103 118 9.3E-31 T 09-03-2017 BV404_RS11485 75b84894d2171a6280b019c89d0e6eb6 318 SUPERFAMILY SSF55060 178 294 5.04E-32 T 09-03-2017 IPR013750 GHMP kinase, C-terminal domain BV404_RS11485 75b84894d2171a6280b019c89d0e6eb6 318 Pfam PF08544 GHMP kinases C terminal 218 292 1.9E-9 T 09-03-2017 IPR013750 GHMP kinase, C-terminal domain BV404_RS11485 75b84894d2171a6280b019c89d0e6eb6 318 Gene3D G3DSA:3.30.70.890 174 304 2.5E-40 T 09-03-2017 IPR013750 GHMP kinase, C-terminal domain BV404_RS11485 75b84894d2171a6280b019c89d0e6eb6 318 PIRSF PIRSF000676 1 316 8.2E-80 T 09-03-2017 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 BV404_RS11485 75b84894d2171a6280b019c89d0e6eb6 318 Gene3D G3DSA:3.30.230.10 2 165 5.5E-45 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BV404_RS11485 75b84894d2171a6280b019c89d0e6eb6 318 TIGRFAM TIGR00191 thrB: homoserine kinase 3 314 3.0E-107 T 09-03-2017 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 BV404_RS11485 75b84894d2171a6280b019c89d0e6eb6 318 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 96 107 - T 09-03-2017 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 BV404_RS12345 e5819029af3f128ad28f0a2f1238c544 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 3.0E-38 T 09-03-2017 IPR007457 Fe(II) trafficking protein YggX GO:0005506 BV404_RS12345 e5819029af3f128ad28f0a2f1238c544 90 Gene3D G3DSA:1.10.3880.10 1 89 2.6E-45 T 09-03-2017 BV404_RS12345 e5819029af3f128ad28f0a2f1238c544 90 SUPERFAMILY SSF111148 1 89 7.98E-42 T 09-03-2017 IPR007457 Fe(II) trafficking protein YggX GO:0005506 BV404_RS12345 e5819029af3f128ad28f0a2f1238c544 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.808 T 09-03-2017 IPR007457 Fe(II) trafficking protein YggX GO:0005506 BV404_RS12345 e5819029af3f128ad28f0a2f1238c544 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 3.1E-43 T 09-03-2017 IPR007457 Fe(II) trafficking protein YggX GO:0005506 BV404_RS12345 e5819029af3f128ad28f0a2f1238c544 90 PIRSF PIRSF029827 1 90 2.0E-44 T 09-03-2017 IPR007457 Fe(II) trafficking protein YggX GO:0005506 BV404_RS02020 287032a11339be11872e82bab2c13dd6 455 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 23 452 8.4E-160 T 09-03-2017 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 BV404_RS02020 287032a11339be11872e82bab2c13dd6 455 SUPERFAMILY SSF81891 181 418 2.35E-47 T 09-03-2017 BV404_RS02020 287032a11339be11872e82bab2c13dd6 455 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 210 270 1.0E-21 T 09-03-2017 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 BV404_RS02020 287032a11339be11872e82bab2c13dd6 455 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 7 447 37.63 T 09-03-2017 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 BV404_RS02020 287032a11339be11872e82bab2c13dd6 455 Gene3D G3DSA:1.10.3090.10 183 418 3.3E-50 T 09-03-2017 BV404_RS02020 287032a11339be11872e82bab2c13dd6 455 Gene3D G3DSA:3.30.460.10 35 182 2.7E-50 T 09-03-2017 BV404_RS02020 287032a11339be11872e82bab2c13dd6 455 Pfam PF01743 Poly A polymerase head domain 54 183 1.4E-38 T 09-03-2017 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 BV404_RS02020 287032a11339be11872e82bab2c13dd6 455 SUPERFAMILY SSF81301 25 180 1.85E-40 T 09-03-2017 BV404_RS02020 287032a11339be11872e82bab2c13dd6 455 Pfam PF12626 Polymerase A arginine-rich C-terminus 329 445 1.5E-37 T 09-03-2017 IPR025866 Polymerase A arginine-rich C-terminal domain BV404_RS08825 40180a06fe824ce65d567b14a8ed6c51 205 Pfam PF01330 RuvA N terminal domain 2 62 2.1E-21 T 09-03-2017 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 BV404_RS08825 40180a06fe824ce65d567b14a8ed6c51 205 SUPERFAMILY SSF50249 2 63 3.31E-18 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS08825 40180a06fe824ce65d567b14a8ed6c51 205 Gene3D G3DSA:1.10.8.10 159 205 3.1E-24 T 09-03-2017 BV404_RS08825 40180a06fe824ce65d567b14a8ed6c51 205 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 204 1.1E-64 T 09-03-2017 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 BV404_RS08825 40180a06fe824ce65d567b14a8ed6c51 205 Gene3D G3DSA:2.40.50.140 2 65 1.6E-27 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS08825 40180a06fe824ce65d567b14a8ed6c51 205 Pfam PF07499 RuvA, C-terminal domain 161 204 7.7E-18 T 09-03-2017 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 BV404_RS08825 40180a06fe824ce65d567b14a8ed6c51 205 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 205 31.8 T 09-03-2017 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 BV404_RS08825 40180a06fe824ce65d567b14a8ed6c51 205 SUPERFAMILY SSF47781 66 136 4.89E-20 T 09-03-2017 IPR010994 RuvA domain 2-like BV404_RS08825 40180a06fe824ce65d567b14a8ed6c51 205 Gene3D G3DSA:1.10.150.20 67 142 1.1E-29 T 09-03-2017 BV404_RS08825 40180a06fe824ce65d567b14a8ed6c51 205 SUPERFAMILY SSF46929 159 204 1.57E-12 T 09-03-2017 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 BV404_RS08825 40180a06fe824ce65d567b14a8ed6c51 205 SMART SM00278 73 92 160.0 T 09-03-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BV404_RS08825 40180a06fe824ce65d567b14a8ed6c51 205 SMART SM00278 108 127 0.071 T 09-03-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BV404_RS08825 40180a06fe824ce65d567b14a8ed6c51 205 Pfam PF14520 Helix-hairpin-helix domain 72 130 2.1E-14 T 09-03-2017 BV404_RS01000 8a8cd6978ddf29902152f03ac1e7f722 101 Pfam PF00253 Ribosomal protein S14p/S29e 48 100 1.2E-24 T 09-03-2017 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS01000 8a8cd6978ddf29902152f03ac1e7f722 101 Gene3D G3DSA:4.10.830.10 41 101 1.1E-29 T 09-03-2017 BV404_RS01000 8a8cd6978ddf29902152f03ac1e7f722 101 SUPERFAMILY SSF57716 2 101 7.84E-37 T 09-03-2017 BV404_RS01000 8a8cd6978ddf29902152f03ac1e7f722 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 09-03-2017 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS01000 8a8cd6978ddf29902152f03ac1e7f722 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.848 T 09-03-2017 IPR023036 Ribosomal protein S14, bacterial/plastid BV404_RS11805 304909d3afca5a34776c2fbfe10a9440 184 Gene3D G3DSA:2.40.30.60 7 102 2.7E-33 T 09-03-2017 IPR002676 RimM protein GO:0006364 BV404_RS11805 304909d3afca5a34776c2fbfe10a9440 184 SUPERFAMILY SSF50447 15 102 1.84E-23 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain BV404_RS11805 304909d3afca5a34776c2fbfe10a9440 184 Pfam PF05239 PRC-barrel domain 105 179 6.6E-12 T 09-03-2017 IPR027275 PRC-barrel domain BV404_RS11805 304909d3afca5a34776c2fbfe10a9440 184 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 16 183 3.3E-56 T 09-03-2017 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 BV404_RS11805 304909d3afca5a34776c2fbfe10a9440 184 Gene3D G3DSA:2.30.30.240 108 183 9.7E-29 T 09-03-2017 BV404_RS11805 304909d3afca5a34776c2fbfe10a9440 184 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 15 184 23.405 T 09-03-2017 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 BV404_RS11805 304909d3afca5a34776c2fbfe10a9440 184 SUPERFAMILY SSF50346 108 182 3.14E-19 T 09-03-2017 IPR011033 PRC-barrel-like BV404_RS11805 304909d3afca5a34776c2fbfe10a9440 184 Pfam PF01782 RimM N-terminal domain 17 97 1.5E-24 T 09-03-2017 IPR002676 RimM protein GO:0006364 BV404_RS06790 e93ec754cc39f41c6e620f1ac01379ef 511 Pfam PF00563 EAL domain 257 487 4.9E-61 T 09-03-2017 IPR001633 EAL domain BV404_RS06790 e93ec754cc39f41c6e620f1ac01379ef 511 Gene3D G3DSA:3.20.20.450 254 499 4.1E-69 T 09-03-2017 IPR001633 EAL domain BV404_RS06790 e93ec754cc39f41c6e620f1ac01379ef 511 Pfam PF12792 CSS motif domain associated with EAL 43 221 2.2E-6 T 09-03-2017 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain BV404_RS06790 e93ec754cc39f41c6e620f1ac01379ef 511 SUPERFAMILY SSF141868 256 500 5.62E-69 T 09-03-2017 IPR001633 EAL domain BV404_RS06790 e93ec754cc39f41c6e620f1ac01379ef 511 SMART SM00052 250 492 7.5E-74 T 09-03-2017 IPR001633 EAL domain BV404_RS10680 522c34e50fc260b768c58c5d1b9cf010 519 SMART SM00062 43 279 3.7E-23 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BV404_RS10680 522c34e50fc260b768c58c5d1b9cf010 519 SUPERFAMILY SSF53850 44 278 2.55E-36 T 09-03-2017 BV404_RS10680 522c34e50fc260b768c58c5d1b9cf010 519 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 9 503 48.366 T 09-03-2017 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 BV404_RS10680 522c34e50fc260b768c58c5d1b9cf010 519 SUPERFAMILY SSF53955 257 408 2.53E-35 T 09-03-2017 IPR023346 Lysozyme-like domain BV404_RS10680 522c34e50fc260b768c58c5d1b9cf010 519 SUPERFAMILY SSF53955 443 460 2.53E-35 T 09-03-2017 IPR023346 Lysozyme-like domain BV404_RS10680 522c34e50fc260b768c58c5d1b9cf010 519 Pfam PF01464 Transglycosylase SLT domain 309 409 9.2E-21 T 09-03-2017 IPR008258 Transglycosylase SLT domain 1 BV404_RS10680 522c34e50fc260b768c58c5d1b9cf010 519 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 278 2.0E-30 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BV404_RS10680 522c34e50fc260b768c58c5d1b9cf010 519 Gene3D G3DSA:3.40.190.10 19 147 7.4E-22 T 09-03-2017 BV404_RS10680 522c34e50fc260b768c58c5d1b9cf010 519 Gene3D G3DSA:1.10.530.10 297 468 2.8E-36 T 09-03-2017 BV404_RS10680 522c34e50fc260b768c58c5d1b9cf010 519 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 320 348 - T 09-03-2017 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 BV404_RS08455 aa461b3628d8d8473b9a9211144ea05a 290 Pfam PF02811 PHP domain 4 219 4.6E-9 T 09-03-2017 IPR004013 PHP domain GO:0003824 BV404_RS08455 aa461b3628d8d8473b9a9211144ea05a 290 SUPERFAMILY SSF89550 165 278 4.19E-56 T 09-03-2017 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 BV404_RS08455 aa461b3628d8d8473b9a9211144ea05a 290 SUPERFAMILY SSF89550 1 83 4.19E-56 T 09-03-2017 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 BV404_RS08455 aa461b3628d8d8473b9a9211144ea05a 290 SMART SM00481 3 70 1.7E-18 T 09-03-2017 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 BV404_RS08455 aa461b3628d8d8473b9a9211144ea05a 290 Gene3D G3DSA:3.20.20.140 157 263 3.9E-46 T 09-03-2017 BV404_RS08455 aa461b3628d8d8473b9a9211144ea05a 290 Gene3D G3DSA:3.20.20.140 1 88 3.9E-46 T 09-03-2017 BV404_RS00290 1f6212cd11c6a40291ddfc2f1aa1377b 256 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 12 252 4.0E-106 T 09-03-2017 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 BV404_RS00290 1f6212cd11c6a40291ddfc2f1aa1377b 256 Gene3D G3DSA:3.40.50.1820 4 254 6.4E-55 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold BV404_RS00290 1f6212cd11c6a40291ddfc2f1aa1377b 256 SUPERFAMILY SSF53474 4 252 1.62E-51 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold BV404_RS00290 1f6212cd11c6a40291ddfc2f1aa1377b 256 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 5 254 45.149 T 09-03-2017 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 BV404_RS00290 1f6212cd11c6a40291ddfc2f1aa1377b 256 Pfam PF00561 alpha/beta hydrolase fold 16 241 2.1E-24 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 BV404_RS07770 0d442d089877b4947caf58a5f8d200a6 103 Gene3D G3DSA:2.60.120.10 10 101 1.2E-13 T 09-03-2017 IPR014710 RmlC-like jelly roll fold BV404_RS07770 0d442d089877b4947caf58a5f8d200a6 103 Pfam PF07883 Cupin domain 38 97 5.7E-8 T 09-03-2017 IPR013096 Cupin 2, conserved barrel BV404_RS07770 0d442d089877b4947caf58a5f8d200a6 103 SUPERFAMILY SSF51182 25 101 1.96E-14 T 09-03-2017 IPR011051 RmlC-like cupin domain BV404_RS14790 25a9384315ce1ee6f0d0772fde8b9006 199 PIRSF PIRSF004553 18 198 1.9E-54 T 09-03-2017 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 BV404_RS14790 25a9384315ce1ee6f0d0772fde8b9006 199 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 131 137 - T 09-03-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BV404_RS14790 25a9384315ce1ee6f0d0772fde8b9006 199 SUPERFAMILY SSF53335 18 195 8.93E-54 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS14790 25a9384315ce1ee6f0d0772fde8b9006 199 Gene3D G3DSA:3.40.50.150 11 197 6.5E-68 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS14790 25a9384315ce1ee6f0d0772fde8b9006 199 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 15 196 1.2E-60 T 09-03-2017 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 BV404_RS14790 25a9384315ce1ee6f0d0772fde8b9006 199 Pfam PF03602 Conserved hypothetical protein 95 19 194 3.7E-62 T 09-03-2017 BV404_RS03105 b069ed5158fd6ec7f9609a628623ce7d 332 Pfam PF01389 OmpA-like transmembrane domain 20 172 3.6E-36 T 09-03-2017 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 BV404_RS03105 b069ed5158fd6ec7f9609a628623ce7d 332 Pfam PF00691 OmpA family 223 317 1.2E-25 T 09-03-2017 IPR006665 OmpA-like domain BV404_RS03105 b069ed5158fd6ec7f9609a628623ce7d 332 ProSitePatterns PS01068 OmpA-like domain. 255 299 - T 09-03-2017 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 BV404_RS03105 b069ed5158fd6ec7f9609a628623ce7d 332 SUPERFAMILY SSF56925 19 172 1.26E-32 T 09-03-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 BV404_RS03105 b069ed5158fd6ec7f9609a628623ce7d 332 PRINTS PR01021 OMPA domain signature 253 268 4.4E-14 T 09-03-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BV404_RS03105 b069ed5158fd6ec7f9609a628623ce7d 332 PRINTS PR01021 OMPA domain signature 223 245 4.4E-14 T 09-03-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BV404_RS03105 b069ed5158fd6ec7f9609a628623ce7d 332 PRINTS PR01021 OMPA domain signature 268 284 4.4E-14 T 09-03-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BV404_RS03105 b069ed5158fd6ec7f9609a628623ce7d 332 SUPERFAMILY SSF103088 197 323 1.57E-37 T 09-03-2017 IPR006665 OmpA-like domain BV404_RS03105 b069ed5158fd6ec7f9609a628623ce7d 332 Gene3D G3DSA:3.30.1330.60 210 323 3.3E-41 T 09-03-2017 IPR006665 OmpA-like domain BV404_RS03105 b069ed5158fd6ec7f9609a628623ce7d 332 Gene3D G3DSA:2.40.160.20 6 193 1.6E-49 T 09-03-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 BV404_RS05465 9c07239861a6ebf5fee2eb19b17b796a 488 SUPERFAMILY SSF55073 339 488 3.53E-36 T 09-03-2017 IPR029787 Nucleotide cyclase BV404_RS05465 9c07239861a6ebf5fee2eb19b17b796a 488 SMART SM00267 322 488 1.2E-40 T 09-03-2017 IPR000160 GGDEF domain BV404_RS05465 9c07239861a6ebf5fee2eb19b17b796a 488 Gene3D G3DSA:3.30.70.270 336 488 1.2E-40 T 09-03-2017 BV404_RS05465 9c07239861a6ebf5fee2eb19b17b796a 488 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 331 486 1.4E-41 T 09-03-2017 IPR000160 GGDEF domain BV404_RS05465 9c07239861a6ebf5fee2eb19b17b796a 488 Pfam PF00990 Diguanylate cyclase, GGDEF domain 334 484 6.6E-37 T 09-03-2017 IPR000160 GGDEF domain BV404_RS11710 7b9a1e87d9cb2572ec320315a15c7692 287 PIRSF PIRSF005917 1 286 4.7E-108 T 09-03-2017 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 BV404_RS11710 7b9a1e87d9cb2572ec320315a15c7692 287 SUPERFAMILY SSF53790 12 232 1.83E-86 T 09-03-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 BV404_RS11710 7b9a1e87d9cb2572ec320315a15c7692 287 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 283 1.1E-101 T 09-03-2017 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 BV404_RS11710 7b9a1e87d9cb2572ec320315a15c7692 287 Gene3D G3DSA:3.30.950.10 122 235 1.4E-45 T 09-03-2017 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 BV404_RS11710 7b9a1e87d9cb2572ec320315a15c7692 287 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 09-03-2017 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 BV404_RS11710 7b9a1e87d9cb2572ec320315a15c7692 287 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.648 T 09-03-2017 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 BV404_RS11710 7b9a1e87d9cb2572ec320315a15c7692 287 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 213 2.4E-30 T 09-03-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 BV404_RS11710 7b9a1e87d9cb2572ec320315a15c7692 287 Gene3D G3DSA:3.40.1010.10 13 121 2.2E-16 T 09-03-2017 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 BV404_RS14655 638b5d475da047679fa4c052e4b54b81 104 SMART SM01219 1 104 3.6E-55 T 09-03-2017 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 BV404_RS14655 638b5d475da047679fa4c052e4b54b81 104 ProSitePatterns PS01344 Frataxin family signature. 48 62 - T 09-03-2017 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 BV404_RS14655 638b5d475da047679fa4c052e4b54b81 104 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 103 5.6E-43 T 09-03-2017 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 BV404_RS14655 638b5d475da047679fa4c052e4b54b81 104 SUPERFAMILY SSF55387 1 103 4.01E-39 T 09-03-2017 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 BV404_RS14655 638b5d475da047679fa4c052e4b54b81 104 Pfam PF01491 Frataxin-like domain 1 100 5.8E-31 T 09-03-2017 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 BV404_RS14655 638b5d475da047679fa4c052e4b54b81 104 Hamap MF_00142 Protein CyaY [cyaY]. 1 103 27.601 T 09-03-2017 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 BV404_RS14655 638b5d475da047679fa4c052e4b54b81 104 Gene3D G3DSA:3.30.920.10 1 103 3.5E-35 T 09-03-2017 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 BV404_RS04240 a006effcbc10bc73556f50bfd6e47daa 341 Gene3D G3DSA:3.40.718.10 3 335 5.4E-126 T 09-03-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 BV404_RS04240 a006effcbc10bc73556f50bfd6e47daa 341 PIRSF PIRSF002465 2 339 6.3E-125 T 09-03-2017 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 BV404_RS04240 a006effcbc10bc73556f50bfd6e47daa 341 Pfam PF02504 Fatty acid synthesis protein 5 327 2.4E-101 T 09-03-2017 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 BV404_RS04240 a006effcbc10bc73556f50bfd6e47daa 341 SUPERFAMILY SSF53659 4 336 8.63E-101 T 09-03-2017 BV404_RS04240 a006effcbc10bc73556f50bfd6e47daa 341 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 335 3.2E-105 T 09-03-2017 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 BV404_RS04240 a006effcbc10bc73556f50bfd6e47daa 341 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 340 136.219 T 09-03-2017 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 BV404_RS12230 38578a15b37c44e96d531964a71079c8 298 SUPERFAMILY SSF53850 89 296 1.66E-28 T 09-03-2017 BV404_RS12230 38578a15b37c44e96d531964a71079c8 298 Gene3D G3DSA:3.40.190.10 176 245 5.2E-11 T 09-03-2017 BV404_RS12230 38578a15b37c44e96d531964a71079c8 298 SUPERFAMILY SSF46785 3 87 4.67E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS12230 38578a15b37c44e96d531964a71079c8 298 Gene3D G3DSA:3.40.190.10 93 175 2.3E-14 T 09-03-2017 BV404_RS12230 38578a15b37c44e96d531964a71079c8 298 Gene3D G3DSA:1.10.10.10 3 87 6.2E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS12230 38578a15b37c44e96d531964a71079c8 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 8.1E-16 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS12230 38578a15b37c44e96d531964a71079c8 298 Pfam PF03466 LysR substrate binding domain 89 293 6.3E-27 T 09-03-2017 IPR005119 LysR, substrate-binding BV404_RS11545 079ea664bca992acfbc273805f501c75 1487 Gene3D G3DSA:3.60.20.10 13 435 6.2E-172 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal BV404_RS11545 079ea664bca992acfbc273805f501c75 1487 Pfam PF01493 GXGXG motif 1237 1419 3.3E-72 T 09-03-2017 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 BV404_RS11545 079ea664bca992acfbc273805f501c75 1487 SUPERFAMILY SSF51395 433 1191 5.29E-251 T 09-03-2017 BV404_RS11545 079ea664bca992acfbc273805f501c75 1487 Pfam PF00310 Glutamine amidotransferases class-II 13 426 9.6E-178 T 09-03-2017 IPR017932 Glutamine amidotransferase type 2 domain BV404_RS11545 079ea664bca992acfbc273805f501c75 1487 SUPERFAMILY SSF56235 13 429 2.18E-148 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal BV404_RS11545 079ea664bca992acfbc273805f501c75 1487 Pfam PF01645 Conserved region in glutamate synthase 794 1157 5.3E-153 T 09-03-2017 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 BV404_RS11545 079ea664bca992acfbc273805f501c75 1487 Gene3D G3DSA:3.20.20.70 820 1189 4.8E-164 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS11545 079ea664bca992acfbc273805f501c75 1487 Pfam PF04898 Glutamate synthase central domain 458 738 1.0E-104 T 09-03-2017 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 BV404_RS11545 079ea664bca992acfbc273805f501c75 1487 Gene3D G3DSA:2.160.20.60 1211 1465 2.1E-94 T 09-03-2017 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 BV404_RS11545 079ea664bca992acfbc273805f501c75 1487 Gene3D G3DSA:3.20.20.70 439 779 1.2E-99 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS11545 079ea664bca992acfbc273805f501c75 1487 SUPERFAMILY SSF69336 1212 1464 2.35E-86 T 09-03-2017 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 BV404_RS11455 5fb0327f7145c01d430e173f915824cd 183 Gene3D G3DSA:1.20.120.520 2 154 5.5E-16 T 09-03-2017 BV404_RS11455 5fb0327f7145c01d430e173f915824cd 183 Pfam PF01814 Hemerythrin HHE cation binding domain 2 135 5.4E-13 T 09-03-2017 IPR012312 Haemerythrin-like Reactome: R-HSA-390471 BV404_RS06995 3ec9af4cf87d624db816533f4d23c460 232 SUPERFAMILY SSF161098 10 221 3.38E-30 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS06995 3ec9af4cf87d624db816533f4d23c460 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 219 1.1E-8 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS06995 3ec9af4cf87d624db816533f4d23c460 232 Gene3D G3DSA:1.10.3720.10 8 221 8.1E-24 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS14755 bbce0358696a8dd1955a4ae383958a3f 337 Pfam PF01757 Acyltransferase family 7 327 8.2E-34 T 09-03-2017 IPR002656 Acyltransferase 3 GO:0016747 BV404_RS07515 8d77db02cf70238a4579f1f35cd35f45 505 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 347 504 2.0E-37 T 09-03-2017 IPR000160 GGDEF domain BV404_RS07515 8d77db02cf70238a4579f1f35cd35f45 505 SUPERFAMILY SSF55073 354 503 6.2E-40 T 09-03-2017 IPR029787 Nucleotide cyclase BV404_RS07515 8d77db02cf70238a4579f1f35cd35f45 505 Pfam PF00990 Diguanylate cyclase, GGDEF domain 350 500 1.8E-35 T 09-03-2017 IPR000160 GGDEF domain BV404_RS07515 8d77db02cf70238a4579f1f35cd35f45 505 SMART SM01079 71 266 6.8E-25 T 09-03-2017 IPR006189 CHASE domain BV404_RS07515 8d77db02cf70238a4579f1f35cd35f45 505 SMART SM00267 338 504 4.9E-44 T 09-03-2017 IPR000160 GGDEF domain BV404_RS07515 8d77db02cf70238a4579f1f35cd35f45 505 Gene3D G3DSA:3.30.70.270 350 504 4.3E-45 T 09-03-2017 BV404_RS07515 8d77db02cf70238a4579f1f35cd35f45 505 Pfam PF03924 CHASE domain 75 264 2.6E-26 T 09-03-2017 IPR006189 CHASE domain BV404_RS06645 57fd192cba342e298508292a506292fa 444 SUPERFAMILY SSF55874 292 438 1.44E-28 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS06645 57fd192cba342e298508292a506292fa 444 SUPERFAMILY SSF51206 18 130 2.62E-13 T 09-03-2017 IPR018490 Cyclic nucleotide-binding-like BV404_RS06645 57fd192cba342e298508292a506292fa 444 Pfam PF00027 Cyclic nucleotide-binding domain 21 98 2.1E-9 T 09-03-2017 IPR000595 Cyclic nucleotide-binding domain BV404_RS06645 57fd192cba342e298508292a506292fa 444 Gene3D G3DSA:3.30.565.10 292 439 5.9E-31 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS06645 57fd192cba342e298508292a506292fa 444 SMART SM00387 328 439 1.1E-21 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS06645 57fd192cba342e298508292a506292fa 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 395 8.6E-11 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS06645 57fd192cba342e298508292a506292fa 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 381 8.6E-11 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS06645 57fd192cba342e298508292a506292fa 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 418 8.6E-11 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS06645 57fd192cba342e298508292a506292fa 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 436 8.6E-11 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS06645 57fd192cba342e298508292a506292fa 444 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 334 438 1.4E-15 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS06645 57fd192cba342e298508292a506292fa 444 Gene3D G3DSA:2.60.120.10 10 99 1.2E-10 T 09-03-2017 IPR014710 RmlC-like jelly roll fold BV404_RS12495 b1fbcea97f0ec52a01e31076123c6f90 322 Gene3D G3DSA:3.40.190.10 25 108 5.1E-67 T 09-03-2017 BV404_RS12495 b1fbcea97f0ec52a01e31076123c6f90 322 Gene3D G3DSA:3.40.190.10 251 320 5.1E-67 T 09-03-2017 BV404_RS12495 b1fbcea97f0ec52a01e31076123c6f90 322 Pfam PF16868 NMT1-like family 30 319 1.1E-97 T 09-03-2017 IPR011852 TRAP transporter solute receptor, TAXI family BV404_RS12495 b1fbcea97f0ec52a01e31076123c6f90 322 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 4 319 2.8E-114 T 09-03-2017 IPR011852 TRAP transporter solute receptor, TAXI family BV404_RS12495 b1fbcea97f0ec52a01e31076123c6f90 322 Gene3D G3DSA:3.40.190.10 118 250 5.8E-36 T 09-03-2017 BV404_RS12495 b1fbcea97f0ec52a01e31076123c6f90 322 SUPERFAMILY SSF53850 25 321 5.07E-89 T 09-03-2017 BV404_RS11415 067eec9af8672cdfb32afc6693a1ed8d 327 SUPERFAMILY SSF53822 31 268 5.5E-18 T 09-03-2017 IPR028082 Periplasmic binding protein-like I BV404_RS11415 067eec9af8672cdfb32afc6693a1ed8d 327 Gene3D G3DSA:3.40.50.2300 124 285 1.1E-58 T 09-03-2017 BV404_RS11415 067eec9af8672cdfb32afc6693a1ed8d 327 Pfam PF02608 Basic membrane protein 26 317 2.9E-59 T 09-03-2017 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 BV404_RS05460 feb38e1128be3483c2662b6475d81a2c 264 Pfam PF00005 ABC transporter 23 177 3.8E-22 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS05460 feb38e1128be3483c2662b6475d81a2c 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS05460 feb38e1128be3483c2662b6475d81a2c 264 SUPERFAMILY SSF52540 2 231 9.87E-48 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS05460 feb38e1128be3483c2662b6475d81a2c 264 SMART SM00382 31 226 3.0E-7 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS05460 feb38e1128be3483c2662b6475d81a2c 264 Gene3D G3DSA:3.40.50.300 1 232 1.4E-54 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS00640 2ff0c1230eff070c0f29ca8cd745cd14 157 Pfam PF02308 MgtC family 18 140 1.4E-30 T 09-03-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 BV404_RS00640 2ff0c1230eff070c0f29ca8cd745cd14 157 PRINTS PR01837 MgtC/SapB protein signature 21 40 3.5E-32 T 09-03-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 BV404_RS00640 2ff0c1230eff070c0f29ca8cd745cd14 157 PRINTS PR01837 MgtC/SapB protein signature 67 89 3.5E-32 T 09-03-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 BV404_RS00640 2ff0c1230eff070c0f29ca8cd745cd14 157 PRINTS PR01837 MgtC/SapB protein signature 94 118 3.5E-32 T 09-03-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 BV404_RS00640 2ff0c1230eff070c0f29ca8cd745cd14 157 PRINTS PR01837 MgtC/SapB protein signature 40 58 3.5E-32 T 09-03-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 BV404_RS07970 f80f6577491d8eece3df895c82e58553 180 PIRSF PIRSF006135 2 179 4.0E-54 T 09-03-2017 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 BV404_RS07970 f80f6577491d8eece3df895c82e58553 180 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 5 176 8.1E-57 T 09-03-2017 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 BV404_RS07970 f80f6577491d8eece3df895c82e58553 180 Gene3D G3DSA:3.40.50.300 3 177 2.2E-59 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS07970 f80f6577491d8eece3df895c82e58553 180 SUPERFAMILY SSF52540 3 177 4.61E-50 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS01730 2af5db942089bb48a753dd9d9350c3bb 322 Gene3D G3DSA:2.50.20.10 121 185 1.5E-8 T 09-03-2017 BV404_RS01730 2af5db942089bb48a753dd9d9350c3bb 322 Pfam PF17188 MucB/RseB C-terminal domain 219 312 5.3E-26 T 09-03-2017 IPR033436 MucB/RseB, C-terminal BV404_RS01730 2af5db942089bb48a753dd9d9350c3bb 322 Pfam PF03888 MucB/RseB N-terminal domain 25 195 4.2E-59 T 09-03-2017 IPR033434 MucB/RseB, N-terminal BV404_RS01730 2af5db942089bb48a753dd9d9350c3bb 322 PIRSF PIRSF005427 1 319 2.1E-82 T 09-03-2017 IPR005588 MucB/RseB BV404_RS16795 a1f67ec4772183f2bf4d47f843d4088f 145 SUPERFAMILY SSF52540 44 144 6.21E-14 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS16795 a1f67ec4772183f2bf4d47f843d4088f 145 Pfam PF00271 Helicase conserved C-terminal domain 68 144 5.2E-6 T 09-03-2017 IPR001650 Helicase, C-terminal BV404_RS16795 a1f67ec4772183f2bf4d47f843d4088f 145 Gene3D G3DSA:3.40.50.300 63 144 1.9E-7 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS08840 e230c9c1c605dbe3f83a1f8cce374b24 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 160 1.8E-48 T 09-03-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 BV404_RS08840 e230c9c1c605dbe3f83a1f8cce374b24 164 SUPERFAMILY SSF50891 1 162 2.34E-58 T 09-03-2017 IPR029000 Cyclophilin-like domain BV404_RS08840 e230c9c1c605dbe3f83a1f8cce374b24 164 Gene3D G3DSA:2.40.100.10 2 162 1.5E-53 T 09-03-2017 IPR029000 Cyclophilin-like domain BV404_RS08840 e230c9c1c605dbe3f83a1f8cce374b24 164 PIRSF PIRSF001467 1 163 1.9E-28 T 09-03-2017 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 BV404_RS08840 e230c9c1c605dbe3f83a1f8cce374b24 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 09-03-2017 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 BV404_RS08840 e230c9c1c605dbe3f83a1f8cce374b24 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 7.7E-12 T 09-03-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 BV404_RS08840 e230c9c1c605dbe3f83a1f8cce374b24 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 7.7E-12 T 09-03-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 BV404_RS08840 e230c9c1c605dbe3f83a1f8cce374b24 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 7.7E-12 T 09-03-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 BV404_RS14735 fed6b3b589737124c0a98a4fe6bcd397 334 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 09-03-2017 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS14735 fed6b3b589737124c0a98a4fe6bcd397 334 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 6.8E-59 T 09-03-2017 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS14735 fed6b3b589737124c0a98a4fe6bcd397 334 SUPERFAMILY SSF51735 1 173 4.23E-53 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS14735 fed6b3b589737124c0a98a4fe6bcd397 334 Gene3D G3DSA:3.40.50.720 2 160 1.6E-60 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS14735 fed6b3b589737124c0a98a4fe6bcd397 334 SMART SM00846 3 152 3.9E-70 T 09-03-2017 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS14735 fed6b3b589737124c0a98a4fe6bcd397 334 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 323 3.7E-119 T 09-03-2017 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS14735 fed6b3b589737124c0a98a4fe6bcd397 334 SUPERFAMILY SSF55347 152 314 5.66E-63 T 09-03-2017 BV404_RS14735 fed6b3b589737124c0a98a4fe6bcd397 334 Gene3D G3DSA:3.30.360.10 161 315 2.1E-66 T 09-03-2017 BV404_RS14735 fed6b3b589737124c0a98a4fe6bcd397 334 PIRSF PIRSF000149 1 333 2.7E-115 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS14735 fed6b3b589737124c0a98a4fe6bcd397 334 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 152 8.6E-50 T 09-03-2017 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS14735 fed6b3b589737124c0a98a4fe6bcd397 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 2.0E-28 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS14735 fed6b3b589737124c0a98a4fe6bcd397 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 108 121 2.0E-28 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS14735 fed6b3b589737124c0a98a4fe6bcd397 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 2.0E-28 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS14735 fed6b3b589737124c0a98a4fe6bcd397 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 2.0E-28 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS14735 fed6b3b589737124c0a98a4fe6bcd397 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 2.0E-28 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS04720 e51ce2cbf2fcb4a78558b6ec9b387a7e 247 Pfam PF02108 Flagellar assembly protein FliH 103 225 1.3E-27 T 09-03-2017 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE BV404_RS04720 e51ce2cbf2fcb4a78558b6ec9b387a7e 247 SUPERFAMILY SSF160527 131 237 9.94E-6 T 09-03-2017 BV404_RS04350 325ab0e6b757d478edd4a27ae77ce3f0 474 SUPERFAMILY SSF56672 26 230 9.93E-29 T 09-03-2017 BV404_RS04350 325ab0e6b757d478edd4a27ae77ce3f0 474 Pfam PF00817 impB/mucB/samB family 15 149 9.3E-8 T 09-03-2017 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 BV404_RS08970 2c26a1e743c642abf93079653f8ced6f 247 Gene3D G3DSA:3.90.550.10 1 245 9.5E-86 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases BV404_RS08970 2c26a1e743c642abf93079653f8ced6f 247 SUPERFAMILY SSF53448 1 245 9.86E-65 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases BV404_RS08970 2c26a1e743c642abf93079653f8ced6f 247 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 240 8.5E-115 T 09-03-2017 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 BV404_RS08970 2c26a1e743c642abf93079653f8ced6f 247 Pfam PF02348 Cytidylyltransferase 5 220 3.3E-66 T 09-03-2017 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 BV404_RS08970 2c26a1e743c642abf93079653f8ced6f 247 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 247 46.671 T 09-03-2017 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 BV404_RS13155 d8996956b7573f8443a99e7cff8ae8b1 347 Gene3D G3DSA:3.30.43.10 8 70 3.5E-20 T 09-03-2017 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 BV404_RS13155 d8996956b7573f8443a99e7cff8ae8b1 347 Pfam PF01565 FAD binding domain 23 142 5.0E-17 T 09-03-2017 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 BV404_RS13155 d8996956b7573f8443a99e7cff8ae8b1 347 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 9 332 2.6E-92 T 09-03-2017 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BV404_RS13155 d8996956b7573f8443a99e7cff8ae8b1 347 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 208 330 4.7E-34 T 09-03-2017 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BV404_RS13155 d8996956b7573f8443a99e7cff8ae8b1 347 Gene3D G3DSA:3.30.465.10 76 232 2.6E-49 T 09-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 BV404_RS13155 d8996956b7573f8443a99e7cff8ae8b1 347 SUPERFAMILY SSF56194 206 340 3.27E-48 T 09-03-2017 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BV404_RS13155 d8996956b7573f8443a99e7cff8ae8b1 347 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 347 79.349 T 09-03-2017 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BV404_RS13155 d8996956b7573f8443a99e7cff8ae8b1 347 Gene3D G3DSA:3.90.78.10 233 336 1.5E-43 T 09-03-2017 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BV404_RS13155 d8996956b7573f8443a99e7cff8ae8b1 347 SUPERFAMILY SSF56176 8 199 7.09E-41 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 BV404_RS00590 d9832f6d7257509ee0b16ad33da7a755 256 SUPERFAMILY SSF51351 2 250 4.71E-89 T 09-03-2017 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS00590 d9832f6d7257509ee0b16ad33da7a755 256 ProSitePatterns PS00171 Triosephosphate isomerase active site. 167 177 - T 09-03-2017 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS00590 d9832f6d7257509ee0b16ad33da7a755 256 Pfam PF00121 Triosephosphate isomerase 5 247 4.1E-87 T 09-03-2017 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS00590 d9832f6d7257509ee0b16ad33da7a755 256 Gene3D G3DSA:3.20.20.70 1 253 8.0E-99 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS00590 d9832f6d7257509ee0b16ad33da7a755 256 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 251 39.535 T 09-03-2017 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS00590 d9832f6d7257509ee0b16ad33da7a755 256 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 241 1.1E-76 T 09-03-2017 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BV404_RS01945 4563f88d0dc65261e3f6f06d0ca09340 302 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 10 302 56.649 T 09-03-2017 IPR023009 Tyrosine recombinase XerC/XerD BV404_RS01945 4563f88d0dc65261e3f6f06d0ca09340 302 SUPERFAMILY SSF47823 8 104 1.69E-35 T 09-03-2017 IPR010998 Integrase, Lambda-type, N-terminal BV404_RS01945 4563f88d0dc65261e3f6f06d0ca09340 302 SUPERFAMILY SSF56349 110 300 3.24E-56 T 09-03-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BV404_RS01945 4563f88d0dc65261e3f6f06d0ca09340 302 Pfam PF00589 Phage integrase family 117 288 2.0E-54 T 09-03-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BV404_RS01945 4563f88d0dc65261e3f6f06d0ca09340 302 Gene3D G3DSA:1.10.443.10 117 293 2.3E-57 T 09-03-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 BV404_RS01945 4563f88d0dc65261e3f6f06d0ca09340 302 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 8 302 61.236 T 09-03-2017 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 BV404_RS01945 4563f88d0dc65261e3f6f06d0ca09340 302 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 13 302 1.5E-116 T 09-03-2017 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 BV404_RS01945 4563f88d0dc65261e3f6f06d0ca09340 302 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 12 94 6.7E-20 T 09-03-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 BV404_RS01945 4563f88d0dc65261e3f6f06d0ca09340 302 Gene3D G3DSA:1.10.150.130 11 103 3.6E-28 T 09-03-2017 IPR023109 Integrase/recombinase, N-terminal BV404_RS14165 4cdc72d164af4d64a780336aba9d02bf 85 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 8 76 24.831 T 09-03-2017 IPR002696 Putative membrane protein insertion efficiency factor BV404_RS14165 4cdc72d164af4d64a780336aba9d02bf 85 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 23 75 2.0E-24 T 09-03-2017 IPR002696 Putative membrane protein insertion efficiency factor BV404_RS14165 4cdc72d164af4d64a780336aba9d02bf 85 Pfam PF01809 Haemolytic domain 11 75 2.9E-29 T 09-03-2017 IPR002696 Putative membrane protein insertion efficiency factor BV404_RS14165 4cdc72d164af4d64a780336aba9d02bf 85 SMART SM01234 8 75 1.6E-43 T 09-03-2017 IPR002696 Putative membrane protein insertion efficiency factor BV404_RS14165 4cdc72d164af4d64a780336aba9d02bf 85 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 13 82 1.2E-31 T 09-03-2017 IPR002696 Putative membrane protein insertion efficiency factor BV404_RS12060 a854cc3e6466375da594ca622d55d1b6 402 Pfam PF13356 Domain of unknown function (DUF4102) 15 105 3.8E-13 T 09-03-2017 IPR025166 Domain of unknown function DUF4102 BV404_RS12060 a854cc3e6466375da594ca622d55d1b6 402 Gene3D G3DSA:1.10.150.130 113 208 1.5E-17 T 09-03-2017 IPR023109 Integrase/recombinase, N-terminal BV404_RS12060 a854cc3e6466375da594ca622d55d1b6 402 Gene3D G3DSA:1.10.443.10 214 388 1.7E-36 T 09-03-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 BV404_RS12060 a854cc3e6466375da594ca622d55d1b6 402 SUPERFAMILY SSF56349 111 387 1.62E-60 T 09-03-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BV404_RS12060 a854cc3e6466375da594ca622d55d1b6 402 Pfam PF00589 Phage integrase family 215 381 3.1E-25 T 09-03-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BV404_RS00205 9a31a2aaaabb97c7f4367d965cbe5ada 128 SMART SM00363 8 71 5.3E-10 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 BV404_RS00205 9a31a2aaaabb97c7f4367d965cbe5ada 128 Pfam PF01479 S4 domain 8 54 4.7E-13 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 BV404_RS00205 9a31a2aaaabb97c7f4367d965cbe5ada 128 Gene3D G3DSA:3.10.290.10 7 102 1.5E-39 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 BV404_RS00205 9a31a2aaaabb97c7f4367d965cbe5ada 128 SUPERFAMILY SSF55174 8 103 1.39E-32 T 09-03-2017 BV404_RS00205 9a31a2aaaabb97c7f4367d965cbe5ada 128 PIRSF PIRSF016821 5 128 1.1E-41 T 09-03-2017 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 BV404_RS01250 d7bb3e13cec9e96d36043b152799cbd8 286 Pfam PF03668 P-loop ATPase protein family 1 284 5.7E-111 T 09-03-2017 IPR005337 RapZ-like family GO:0005524 BV404_RS01250 d7bb3e13cec9e96d36043b152799cbd8 286 Gene3D G3DSA:3.40.50.300 1 155 3.0E-16 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS01250 d7bb3e13cec9e96d36043b152799cbd8 286 SUPERFAMILY SSF52540 1 151 7.92E-12 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS01250 d7bb3e13cec9e96d36043b152799cbd8 286 PIRSF PIRSF005052 1 286 1.5E-105 T 09-03-2017 IPR005337 RapZ-like family GO:0005524 BV404_RS01250 d7bb3e13cec9e96d36043b152799cbd8 286 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 283 40.51 T 09-03-2017 IPR005337 RapZ-like family GO:0005524 BV404_RS04140 db4fc1046ad09dcd653b0cbdca876a7a 397 Pfam PF00155 Aminotransferase class I and II 27 393 9.2E-78 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BV404_RS04140 db4fc1046ad09dcd653b0cbdca876a7a 397 PRINTS PR00799 Aspartate aminotransferase signature 176 195 5.1E-35 T 09-03-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 BV404_RS04140 db4fc1046ad09dcd653b0cbdca876a7a 397 PRINTS PR00799 Aspartate aminotransferase signature 207 219 5.1E-35 T 09-03-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 BV404_RS04140 db4fc1046ad09dcd653b0cbdca876a7a 397 PRINTS PR00799 Aspartate aminotransferase signature 275 300 5.1E-35 T 09-03-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 BV404_RS04140 db4fc1046ad09dcd653b0cbdca876a7a 397 PRINTS PR00799 Aspartate aminotransferase signature 343 361 5.1E-35 T 09-03-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 BV404_RS04140 db4fc1046ad09dcd653b0cbdca876a7a 397 Gene3D G3DSA:3.40.640.10 46 317 1.8E-101 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 BV404_RS04140 db4fc1046ad09dcd653b0cbdca876a7a 397 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 245 258 - T 09-03-2017 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 BV404_RS04140 db4fc1046ad09dcd653b0cbdca876a7a 397 SUPERFAMILY SSF53383 2 392 2.84E-112 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase BV404_RS14815 8add82b902e28ae4fc95f65a35818a98 106 SMART SM00450 7 102 2.5E-18 T 09-03-2017 IPR001763 Rhodanese-like domain BV404_RS14815 8add82b902e28ae4fc95f65a35818a98 106 SUPERFAMILY SSF52821 1 105 3.93E-29 T 09-03-2017 IPR001763 Rhodanese-like domain BV404_RS14815 8add82b902e28ae4fc95f65a35818a98 106 Pfam PF00581 Rhodanese-like domain 13 98 1.0E-11 T 09-03-2017 IPR001763 Rhodanese-like domain BV404_RS14815 8add82b902e28ae4fc95f65a35818a98 106 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 106 33.295 T 09-03-2017 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 BV404_RS14815 8add82b902e28ae4fc95f65a35818a98 106 Gene3D G3DSA:3.40.250.10 2 104 1.7E-29 T 09-03-2017 IPR001763 Rhodanese-like domain BV404_RS01935 71420b415068a6e6328f7f8265ce4450 183 SUPERFAMILY SSF55846 2 180 7.07E-66 T 09-03-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 BV404_RS01935 71420b415068a6e6328f7f8265ce4450 183 SMART SM00644 16 167 3.2E-54 T 09-03-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 BV404_RS01935 71420b415068a6e6328f7f8265ce4450 183 Gene3D G3DSA:3.40.80.10 4 180 8.5E-67 T 09-03-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 BV404_RS01935 71420b415068a6e6328f7f8265ce4450 183 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 26 167 1.8E-21 T 09-03-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 BV404_RS10935 4bcd924ef95a4f42b1623792bf48a02c 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 09-03-2017 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 BV404_RS10935 4bcd924ef95a4f42b1623792bf48a02c 112 Gene3D G3DSA:3.10.20.30 4 108 4.4E-35 T 09-03-2017 IPR012675 Beta-grasp domain BV404_RS10935 4bcd924ef95a4f42b1623792bf48a02c 112 SUPERFAMILY SSF54292 4 107 6.17E-34 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 BV404_RS10935 4bcd924ef95a4f42b1623792bf48a02c 112 PRINTS PR00355 Adrenodoxin signature 42 52 5.7E-10 T 09-03-2017 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 BV404_RS10935 4bcd924ef95a4f42b1623792bf48a02c 112 PRINTS PR00355 Adrenodoxin signature 83 91 5.7E-10 T 09-03-2017 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 BV404_RS10935 4bcd924ef95a4f42b1623792bf48a02c 112 PRINTS PR00355 Adrenodoxin signature 60 74 5.7E-10 T 09-03-2017 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 BV404_RS10935 4bcd924ef95a4f42b1623792bf48a02c 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 12 91 3.6E-15 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 BV404_RS10935 4bcd924ef95a4f42b1623792bf48a02c 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 110 7.9E-62 T 09-03-2017 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 BV404_RS08865 7cc1ac1206b22061e967e6546d044fd3 334 Gene3D G3DSA:2.40.160.10 20 334 7.6E-34 T 09-03-2017 IPR023614 Porin domain BV404_RS08865 7cc1ac1206b22061e967e6546d044fd3 334 SUPERFAMILY SSF56935 20 334 7.94E-38 T 09-03-2017 BV404_RS08865 7cc1ac1206b22061e967e6546d044fd3 334 Pfam PF13609 Gram-negative porin 7 302 1.6E-22 T 09-03-2017 BV404_RS09560 a14b58e7cb5e481bd87faca179a1f6ca 367 SMART SM00448 20 132 8.5E-28 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS09560 a14b58e7cb5e481bd87faca179a1f6ca 367 Gene3D G3DSA:3.40.50.2300 22 142 1.3E-32 T 09-03-2017 BV404_RS09560 a14b58e7cb5e481bd87faca179a1f6ca 367 Pfam PF00072 Response regulator receiver domain 22 125 5.2E-26 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS09560 a14b58e7cb5e481bd87faca179a1f6ca 367 SUPERFAMILY SSF52172 21 138 1.99E-32 T 09-03-2017 IPR011006 CheY-like superfamily BV404_RS04870 120bb12cbb4caf8defa05f81e3b3c040 614 TIGRFAM TIGR03710 OAFO_sf: 2-oxoacid:acceptor oxidoreductase, alpha subunit 10 602 2.6E-188 T 09-03-2017 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit KEGG: 00020+1.2.7.3|KEGG: 00720+1.2.7.3|MetaCyc: PWY-5392|MetaCyc: PWY-6969 BV404_RS04870 120bb12cbb4caf8defa05f81e3b3c040 614 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 509 578 2.8E-7 T 09-03-2017 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II BV404_RS04870 120bb12cbb4caf8defa05f81e3b3c040 614 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 256 441 5.8E-53 T 09-03-2017 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 BV404_RS04870 120bb12cbb4caf8defa05f81e3b3c040 614 SUPERFAMILY SSF52922 506 609 6.0E-13 T 09-03-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 BV404_RS04870 120bb12cbb4caf8defa05f81e3b3c040 614 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 17 206 7.0E-23 T 09-03-2017 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 BV404_RS04870 120bb12cbb4caf8defa05f81e3b3c040 614 Gene3D G3DSA:3.40.50.920 506 608 1.9E-11 T 09-03-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 BV404_RS04870 120bb12cbb4caf8defa05f81e3b3c040 614 Gene3D G3DSA:3.40.920.10 11 210 7.9E-20 T 09-03-2017 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 BV404_RS04870 120bb12cbb4caf8defa05f81e3b3c040 614 Gene3D G3DSA:3.40.50.970 225 420 1.2E-72 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold BV404_RS04870 120bb12cbb4caf8defa05f81e3b3c040 614 SUPERFAMILY SSF52518 231 490 2.19E-62 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold BV404_RS14360 71c845df5cefe7ad2245d1ccd62a1b24 401 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 194 381 7.6E-45 T 09-03-2017 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BV404_RS14360 71c845df5cefe7ad2245d1ccd62a1b24 401 SUPERFAMILY SSF51391 183 384 3.01E-58 T 09-03-2017 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BV404_RS14360 71c845df5cefe7ad2245d1ccd62a1b24 401 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 174 387 19.154 T 09-03-2017 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BV404_RS14360 71c845df5cefe7ad2245d1ccd62a1b24 401 Gene3D G3DSA:3.20.20.70 178 385 3.7E-62 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS14360 71c845df5cefe7ad2245d1ccd62a1b24 401 Pfam PF02581 Thiamine monophosphate synthase/TENI 192 369 6.0E-51 T 09-03-2017 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BV404_RS02655 eb9abd728c0744cec4d2c63edee0a9cd 110 SUPERFAMILY SSF55331 1 110 1.01E-36 T 09-03-2017 IPR014347 Tautomerase/MIF superfamily BV404_RS02655 eb9abd728c0744cec4d2c63edee0a9cd 110 Pfam PF08921 Domain of unknown function (DUF1904) 1 109 1.2E-37 T 09-03-2017 IPR015017 Protein of unknown function DUF1904 BV404_RS02655 eb9abd728c0744cec4d2c63edee0a9cd 110 Gene3D G3DSA:3.30.429.10 1 110 2.2E-44 T 09-03-2017 BV404_RS06340 99223457db2b81daaf604513a4f5dbcb 170 PIRSF PIRSF028103 1 170 1.0E-42 T 09-03-2017 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 BV404_RS06340 99223457db2b81daaf604513a4f5dbcb 170 SUPERFAMILY SSF55021 88 167 1.71E-11 T 09-03-2017 BV404_RS06340 99223457db2b81daaf604513a4f5dbcb 170 Gene3D G3DSA:3.30.70.260 84 166 9.1E-16 T 09-03-2017 BV404_RS06340 99223457db2b81daaf604513a4f5dbcb 170 Gene3D G3DSA:3.30.70.260 4 68 5.8E-4 T 09-03-2017 BV404_RS06340 99223457db2b81daaf604513a4f5dbcb 170 Pfam PF13740 ACT domain 4 63 2.6E-8 T 09-03-2017 BV404_RS11615 2b5c1ca5fb8fc0dd73ff3eec1bb07b38 269 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 128 264 1.3E-43 T 09-03-2017 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BV404_RS11615 2b5c1ca5fb8fc0dd73ff3eec1bb07b38 269 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 265 6.5E-99 T 09-03-2017 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BV404_RS11615 2b5c1ca5fb8fc0dd73ff3eec1bb07b38 269 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 150 167 - T 09-03-2017 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BV404_RS11615 2b5c1ca5fb8fc0dd73ff3eec1bb07b38 269 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 265 35.568 T 09-03-2017 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BV404_RS11615 2b5c1ca5fb8fc0dd73ff3eec1bb07b38 269 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 125 2.4E-40 T 09-03-2017 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BV404_RS11615 2b5c1ca5fb8fc0dd73ff3eec1bb07b38 269 PIRSF PIRSF000161 1 268 2.7E-89 T 09-03-2017 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BV404_RS11615 2b5c1ca5fb8fc0dd73ff3eec1bb07b38 269 SUPERFAMILY SSF51735 236 268 1.58E-51 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS11615 2b5c1ca5fb8fc0dd73ff3eec1bb07b38 269 SUPERFAMILY SSF51735 1 126 1.58E-51 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS11615 2b5c1ca5fb8fc0dd73ff3eec1bb07b38 269 Gene3D G3DSA:3.40.50.720 1 163 2.4E-58 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS11615 2b5c1ca5fb8fc0dd73ff3eec1bb07b38 269 SUPERFAMILY SSF55347 127 236 1.26E-37 T 09-03-2017 BV404_RS00270 fbf3d6b65f0b89508cb4c0f79968731d 275 Gene3D G3DSA:3.30.540.10 6 162 2.3E-44 T 09-03-2017 BV404_RS00270 fbf3d6b65f0b89508cb4c0f79968731d 275 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 10 260 2.7E-107 T 09-03-2017 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 BV404_RS00270 fbf3d6b65f0b89508cb4c0f79968731d 275 SUPERFAMILY SSF56655 6 272 3.93E-78 T 09-03-2017 BV404_RS00270 fbf3d6b65f0b89508cb4c0f79968731d 275 Gene3D G3DSA:3.40.190.80 163 262 1.2E-35 T 09-03-2017 BV404_RS00270 fbf3d6b65f0b89508cb4c0f79968731d 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 65 81 3.1E-14 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 BV404_RS00270 fbf3d6b65f0b89508cb4c0f79968731d 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 43 63 3.1E-14 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 BV404_RS00270 fbf3d6b65f0b89508cb4c0f79968731d 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 89 105 3.1E-14 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 BV404_RS00270 fbf3d6b65f0b89508cb4c0f79968731d 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 185 206 3.1E-14 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 BV404_RS00270 fbf3d6b65f0b89508cb4c0f79968731d 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 217 241 3.1E-14 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 BV404_RS00270 fbf3d6b65f0b89508cb4c0f79968731d 275 Pfam PF00459 Inositol monophosphatase family 14 253 6.2E-51 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 BV404_RS02765 79677420ab05e9e4a761d827d3d2aa45 146 Gene3D G3DSA:2.40.70.10 3 134 7.0E-44 T 09-03-2017 IPR021109 Aspartic peptidase domain BV404_RS02765 79677420ab05e9e4a761d827d3d2aa45 146 SUPERFAMILY SSF50630 6 140 8.44E-43 T 09-03-2017 IPR021109 Aspartic peptidase domain BV404_RS02765 79677420ab05e9e4a761d827d3d2aa45 146 Pfam PF05618 Putative ATP-dependant zinc protease 6 141 5.1E-47 T 09-03-2017 BV404_RS04540 7c7903b363dd79f63714868407a60315 261 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 5.9E-117 T 09-03-2017 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 BV404_RS04540 7c7903b363dd79f63714868407a60315 261 SUPERFAMILY SSF117143 92 222 2.09E-35 T 09-03-2017 BV404_RS04540 7c7903b363dd79f63714868407a60315 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 136 2.1E-45 T 09-03-2017 IPR020013 Fagellar hook-basal body protein, FlgE/F/G BV404_RS04540 7c7903b363dd79f63714868407a60315 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 148 243 6.0E-32 T 09-03-2017 IPR020013 Fagellar hook-basal body protein, FlgE/F/G BV404_RS04540 7c7903b363dd79f63714868407a60315 261 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 09-03-2017 IPR019776 Flagellar basal body rod protein, conserved site BV404_RS04540 7c7903b363dd79f63714868407a60315 261 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 258 7.6E-27 T 09-03-2017 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BV404_RS04540 7c7903b363dd79f63714868407a60315 261 Pfam PF00460 Flagella basal body rod protein 5 35 4.4E-11 T 09-03-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BV404_RS14715 4c2dcb89345dbc00d2921f0796bc9166 332 Pfam PF12146 Serine aminopeptidase, S33 54 311 1.1E-57 T 09-03-2017 IPR022742 Serine aminopeptidase, S33 BV404_RS14715 4c2dcb89345dbc00d2921f0796bc9166 332 Gene3D G3DSA:3.40.50.1820 33 324 1.0E-39 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold BV404_RS14715 4c2dcb89345dbc00d2921f0796bc9166 332 PRINTS PR00111 Alpha/beta hydrolase fold signature 264 278 8.9E-6 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 BV404_RS14715 4c2dcb89345dbc00d2921f0796bc9166 332 PRINTS PR00111 Alpha/beta hydrolase fold signature 83 98 8.9E-6 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 BV404_RS14715 4c2dcb89345dbc00d2921f0796bc9166 332 PRINTS PR00111 Alpha/beta hydrolase fold signature 136 149 8.9E-6 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 BV404_RS14715 4c2dcb89345dbc00d2921f0796bc9166 332 SUPERFAMILY SSF53474 36 319 6.08E-39 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold BV404_RS09760 108bbcc2fbc4547aa34c780035bd1e37 321 PIRSF PIRSF006470 1 321 2.7E-75 T 09-03-2017 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 BV404_RS09760 108bbcc2fbc4547aa34c780035bd1e37 321 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 29 283 3.7E-76 T 09-03-2017 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 BV404_RS09760 108bbcc2fbc4547aa34c780035bd1e37 321 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 28 308 1.7E-93 T 09-03-2017 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 BV404_RS05865 240c0e27f40b8fe3f1ebcd795ec3025e 192 PIRSF PIRSF035805 1 191 1.1E-57 T 09-03-2017 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-73614 BV404_RS05865 240c0e27f40b8fe3f1ebcd795ec3025e 192 Pfam PF00265 Thymidine kinase 2 186 3.5E-61 T 09-03-2017 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-73614 BV404_RS05865 240c0e27f40b8fe3f1ebcd795ec3025e 192 SUPERFAMILY SSF57716 142 189 1.19E-16 T 09-03-2017 BV404_RS05865 240c0e27f40b8fe3f1ebcd795ec3025e 192 Gene3D G3DSA:3.30.60.20 142 189 2.1E-19 T 09-03-2017 BV404_RS05865 240c0e27f40b8fe3f1ebcd795ec3025e 192 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 09-03-2017 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-73614 BV404_RS05865 240c0e27f40b8fe3f1ebcd795ec3025e 192 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 34.945 T 09-03-2017 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-73614 BV404_RS05865 240c0e27f40b8fe3f1ebcd795ec3025e 192 SUPERFAMILY SSF52540 2 141 6.58E-43 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS05865 240c0e27f40b8fe3f1ebcd795ec3025e 192 Gene3D G3DSA:3.40.50.300 14 114 0.001 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS10065 3cb64591fad2278cf82c9e590892c955 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 2.0E-199 T 09-03-2017 BV404_RS10065 3cb64591fad2278cf82c9e590892c955 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 09-03-2017 IPR020612 Methylthiotransferase, conserved site GO:0051539 BV404_RS10065 3cb64591fad2278cf82c9e590892c955 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 72.561 T 09-03-2017 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 BV404_RS10065 3cb64591fad2278cf82c9e590892c955 474 Gene3D G3DSA:3.80.30.20 146 377 3.2E-77 T 09-03-2017 IPR023404 Radical SAM, alpha/beta horseshoe BV404_RS10065 3cb64591fad2278cf82c9e590892c955 474 SUPERFAMILY SSF102114 122 374 3.92E-61 T 09-03-2017 BV404_RS10065 3cb64591fad2278cf82c9e590892c955 474 SMART SM00729 147 367 8.0E-64 T 09-03-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 BV404_RS10065 3cb64591fad2278cf82c9e590892c955 474 Pfam PF04055 Radical SAM superfamily 151 325 2.1E-26 T 09-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 BV404_RS10065 3cb64591fad2278cf82c9e590892c955 474 Pfam PF01938 TRAM domain 379 440 3.4E-17 T 09-03-2017 IPR002792 TRAM domain BV404_RS10065 3cb64591fad2278cf82c9e590892c955 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 1.5E-150 T 09-03-2017 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 BV404_RS10065 3cb64591fad2278cf82c9e590892c955 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 1.6E-29 T 09-03-2017 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 BV404_RS10570 d430d5f65209c0b0402386c7bc5b8f8d 321 Gene3D G3DSA:3.30.1330.60 173 301 5.1E-31 T 09-03-2017 IPR006665 OmpA-like domain BV404_RS10570 d430d5f65209c0b0402386c7bc5b8f8d 321 Pfam PF00691 OmpA family 197 295 4.7E-18 T 09-03-2017 IPR006665 OmpA-like domain BV404_RS10570 d430d5f65209c0b0402386c7bc5b8f8d 321 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 6 57 6.2E-18 T 09-03-2017 IPR025713 Motility protein B, N-terminal domain BV404_RS10570 d430d5f65209c0b0402386c7bc5b8f8d 321 SUPERFAMILY SSF103088 184 301 9.03E-30 T 09-03-2017 IPR006665 OmpA-like domain BV404_RS02025 0b502ca35769c1cb6c00376f51bc9e67 296 SUPERFAMILY SSF52374 3 281 3.26E-84 T 09-03-2017 BV404_RS02025 0b502ca35769c1cb6c00376f51bc9e67 296 Gene3D G3DSA:3.40.50.620 3 68 5.5E-38 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS02025 0b502ca35769c1cb6c00376f51bc9e67 296 Gene3D G3DSA:3.40.50.620 170 218 5.5E-38 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS02025 0b502ca35769c1cb6c00376f51bc9e67 296 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 126 255 1.1E-15 T 09-03-2017 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 BV404_RS02025 0b502ca35769c1cb6c00376f51bc9e67 296 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 6 107 4.2E-26 T 09-03-2017 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 BV404_RS02025 0b502ca35769c1cb6c00376f51bc9e67 296 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 3 288 40.247 T 09-03-2017 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 BV404_RS02025 0b502ca35769c1cb6c00376f51bc9e67 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 1.3E-13 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 BV404_RS02025 0b502ca35769c1cb6c00376f51bc9e67 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 1.3E-13 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 BV404_RS02025 0b502ca35769c1cb6c00376f51bc9e67 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 184 192 1.3E-13 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 BV404_RS02025 0b502ca35769c1cb6c00376f51bc9e67 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 1.3E-13 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 BV404_RS02025 0b502ca35769c1cb6c00376f51bc9e67 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 168 178 1.3E-13 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 BV404_RS02025 0b502ca35769c1cb6c00376f51bc9e67 296 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 3 268 1.8E-111 T 09-03-2017 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 BV404_RS02025 0b502ca35769c1cb6c00376f51bc9e67 296 Gene3D G3DSA:3.90.800.10 69 168 2.0E-17 T 09-03-2017 BV404_RS08240 747c191d431c5704b2e6e1d91f9a1a12 131 Gene3D G3DSA:3.40.50.300 29 122 2.4E-7 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS08240 747c191d431c5704b2e6e1d91f9a1a12 131 SUPERFAMILY SSF52540 27 122 1.96E-5 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS02740 6880384a05b61efff7cb26501f6cb37e 248 Pfam PF11101 Protein of unknown function (DUF2884) 23 246 5.9E-67 T 09-03-2017 IPR021307 Protein of unknown function DUF2884 BV404_RS03950 3b24e27f868d8f6aa1cc6e24ee6cb156 206 Pfam PF00005 ABC transporter 18 158 1.4E-30 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS03950 3b24e27f868d8f6aa1cc6e24ee6cb156 206 SUPERFAMILY SSF52540 2 194 2.2E-42 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS03950 3b24e27f868d8f6aa1cc6e24ee6cb156 206 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 203 1.6E-78 T 09-03-2017 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 BV404_RS03950 3b24e27f868d8f6aa1cc6e24ee6cb156 206 SMART SM00382 26 205 9.5E-5 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS03950 3b24e27f868d8f6aa1cc6e24ee6cb156 206 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS03950 3b24e27f868d8f6aa1cc6e24ee6cb156 206 Gene3D G3DSA:3.40.50.300 1 193 8.8E-42 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS13350 f503084e2b0ba8326ea7da86990b7e54 358 Pfam PF01595 Domain of unknown function DUF21 9 177 7.2E-29 T 09-03-2017 IPR002550 Domain of unknown function DUF21 BV404_RS13350 f503084e2b0ba8326ea7da86990b7e54 358 Pfam PF00571 CBS domain 264 313 4.6E-5 T 09-03-2017 IPR000644 CBS domain BV404_RS13350 f503084e2b0ba8326ea7da86990b7e54 358 Gene3D G3DSA:3.10.580.10 180 316 7.0E-14 T 09-03-2017 BV404_RS13350 f503084e2b0ba8326ea7da86990b7e54 358 SUPERFAMILY SSF54631 181 315 6.59E-24 T 09-03-2017 BV404_RS00600 06a5c35be2c506875af92b523b9a16e7 141 Pfam PF05656 Protein of unknown function (DUF805) 8 140 7.1E-21 T 09-03-2017 IPR008523 Protein of unknown function DUF805 GO:0016021 BV404_RS19800 dbbb64e055b2ed7607c89d2eff63e9bd 157 Pfam PF00793 DAHP synthetase I family 10 156 6.4E-53 T 09-03-2017 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 BV404_RS19800 dbbb64e055b2ed7607c89d2eff63e9bd 157 Gene3D G3DSA:3.20.20.70 2 157 5.5E-72 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS19800 dbbb64e055b2ed7607c89d2eff63e9bd 157 SUPERFAMILY SSF51569 2 157 4.12E-65 T 09-03-2017 BV404_RS19800 dbbb64e055b2ed7607c89d2eff63e9bd 157 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 2 157 8.1E-74 T 09-03-2017 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 BV404_RS11735 1d22feabefbe6baf3d7d9aad82d09bf2 158 SUPERFAMILY SSF101738 5 119 2.49E-47 T 09-03-2017 IPR007481 Stringent starvation protein B BV404_RS11735 1d22feabefbe6baf3d7d9aad82d09bf2 158 Pfam PF04386 Stringent starvation protein B 9 158 6.4E-43 T 09-03-2017 IPR007481 Stringent starvation protein B BV404_RS11735 1d22feabefbe6baf3d7d9aad82d09bf2 158 PIRSF PIRSF005276 3 158 3.5E-60 T 09-03-2017 IPR007481 Stringent starvation protein B BV404_RS11735 1d22feabefbe6baf3d7d9aad82d09bf2 158 Gene3D G3DSA:2.30.30.220 4 110 7.8E-50 T 09-03-2017 IPR007481 Stringent starvation protein B BV404_RS07040 7bc312f78811b6dbc58dfa79fca639a3 553 Gene3D G3DSA:3.30.70.20 172 247 5.9E-13 T 09-03-2017 BV404_RS07040 7bc312f78811b6dbc58dfa79fca639a3 553 SUPERFAMILY SSF54862 159 238 1.75E-35 T 09-03-2017 BV404_RS07040 7bc312f78811b6dbc58dfa79fca639a3 553 SUPERFAMILY SSF54862 411 509 1.75E-35 T 09-03-2017 BV404_RS07040 7bc312f78811b6dbc58dfa79fca639a3 553 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 420 431 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BV404_RS07040 7bc312f78811b6dbc58dfa79fca639a3 553 Pfam PF12838 4Fe-4S dicluster domain 185 231 2.1E-8 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BV404_RS07040 7bc312f78811b6dbc58dfa79fca639a3 553 Gene3D G3DSA:3.30.70.20 455 497 3.2E-7 T 09-03-2017 BV404_RS07040 7bc312f78811b6dbc58dfa79fca639a3 553 Pfam PF13187 4Fe-4S dicluster domain 419 465 1.9E-6 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BV404_RS07040 7bc312f78811b6dbc58dfa79fca639a3 553 Gene3D G3DSA:3.30.70.20 417 454 5.0E-12 T 09-03-2017 BV404_RS07040 7bc312f78811b6dbc58dfa79fca639a3 553 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 451 462 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BV404_RS04700 12f4b680d7e38f2d62aeb69b17ea1c0d 443 SMART SM00448 4 112 0.0049 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS04700 12f4b680d7e38f2d62aeb69b17ea1c0d 443 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 149 162 - T 09-03-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BV404_RS04700 12f4b680d7e38f2d62aeb69b17ea1c0d 443 SUPERFAMILY SSF52540 129 364 1.78E-71 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS04700 12f4b680d7e38f2d62aeb69b17ea1c0d 443 Pfam PF00158 Sigma-54 interaction domain 126 291 2.0E-70 T 09-03-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BV404_RS04700 12f4b680d7e38f2d62aeb69b17ea1c0d 443 Gene3D G3DSA:3.40.50.300 123 297 3.6E-59 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS04700 12f4b680d7e38f2d62aeb69b17ea1c0d 443 Pfam PF02954 Bacterial regulatory protein, Fis family 390 426 3.6E-9 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BV404_RS04700 12f4b680d7e38f2d62aeb69b17ea1c0d 443 SMART SM00382 145 292 1.9E-10 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS04700 12f4b680d7e38f2d62aeb69b17ea1c0d 443 Gene3D G3DSA:3.40.50.2300 3 117 2.4E-10 T 09-03-2017 BV404_RS04700 12f4b680d7e38f2d62aeb69b17ea1c0d 443 Gene3D G3DSA:1.10.10.60 386 426 2.1E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS04700 12f4b680d7e38f2d62aeb69b17ea1c0d 443 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 335 344 - T 09-03-2017 IPR025944 Sigma-54 interaction domain, conserved site BV404_RS04700 12f4b680d7e38f2d62aeb69b17ea1c0d 443 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 394 411 5.8E-5 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BV404_RS04700 12f4b680d7e38f2d62aeb69b17ea1c0d 443 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 411 431 5.8E-5 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BV404_RS04700 12f4b680d7e38f2d62aeb69b17ea1c0d 443 SUPERFAMILY SSF46689 335 426 8.06E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS04700 12f4b680d7e38f2d62aeb69b17ea1c0d 443 SUPERFAMILY SSF52172 1 169 2.99E-19 T 09-03-2017 IPR011006 CheY-like superfamily BV404_RS04700 12f4b680d7e38f2d62aeb69b17ea1c0d 443 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 211 226 - T 09-03-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BV404_RS04700 12f4b680d7e38f2d62aeb69b17ea1c0d 443 Gene3D G3DSA:1.10.8.60 298 370 1.5E-21 T 09-03-2017 BV404_RS09005 cd548edb4be6906e808e6ea01d8f1fc6 228 SUPERFAMILY SSF52540 4 226 1.46E-68 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09005 cd548edb4be6906e808e6ea01d8f1fc6 228 Gene3D G3DSA:3.40.50.300 2 226 9.2E-66 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09005 cd548edb4be6906e808e6ea01d8f1fc6 228 SMART SM00382 33 221 6.2E-12 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS09005 cd548edb4be6906e808e6ea01d8f1fc6 228 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS09005 cd548edb4be6906e808e6ea01d8f1fc6 228 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 4 223 6.1E-110 T 09-03-2017 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 BV404_RS09005 cd548edb4be6906e808e6ea01d8f1fc6 228 Pfam PF00005 ABC transporter 24 172 2.2E-33 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS08150 fb3461c0386abf85f30ba757737cc802 255 SUPERFAMILY SSF81301 14 82 2.07E-8 T 09-03-2017 BV404_RS08150 fb3461c0386abf85f30ba757737cc802 255 Pfam PF01909 Nucleotidyltransferase domain 35 96 1.7E-6 T 09-03-2017 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 BV404_RS08150 fb3461c0386abf85f30ba757737cc802 255 Gene3D G3DSA:3.30.460.10 24 126 7.0E-12 T 09-03-2017 BV404_RS09725 dc24bb5fa3a5ccaf92491aad92b4b5a9 238 Pfam PF00672 HAMP domain 164 221 1.9E-6 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 BV404_RS14665 2ea5b8c1376c6174104ee43079f9774f 417 Gene3D G3DSA:2.40.37.10 269 414 5.0E-48 T 09-03-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BV404_RS14665 2ea5b8c1376c6174104ee43079f9774f 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 380 402 1.7E-29 T 09-03-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BV404_RS14665 2ea5b8c1376c6174104ee43079f9774f 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 165 174 1.7E-29 T 09-03-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BV404_RS14665 2ea5b8c1376c6174104ee43079f9774f 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 76 93 1.7E-29 T 09-03-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BV404_RS14665 2ea5b8c1376c6174104ee43079f9774f 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 300 318 1.7E-29 T 09-03-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BV404_RS14665 2ea5b8c1376c6174104ee43079f9774f 417 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 227 242 - T 09-03-2017 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site BV404_RS14665 2ea5b8c1376c6174104ee43079f9774f 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 191 204 7.2E-27 T 09-03-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BV404_RS14665 2ea5b8c1376c6174104ee43079f9774f 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 58 76 7.2E-27 T 09-03-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BV404_RS14665 2ea5b8c1376c6174104ee43079f9774f 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 370 383 7.2E-27 T 09-03-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BV404_RS14665 2ea5b8c1376c6174104ee43079f9774f 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 272 291 7.2E-27 T 09-03-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BV404_RS14665 2ea5b8c1376c6174104ee43079f9774f 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 78 90 7.2E-27 T 09-03-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BV404_RS14665 2ea5b8c1376c6174104ee43079f9774f 417 SUPERFAMILY SSF50621 259 414 2.3E-52 T 09-03-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BV404_RS14665 2ea5b8c1376c6174104ee43079f9774f 417 SUPERFAMILY SSF51419 27 284 5.23E-81 T 09-03-2017 IPR029066 PLP-binding barrel BV404_RS14665 2ea5b8c1376c6174104ee43079f9774f 417 Gene3D G3DSA:3.20.20.10 37 268 3.9E-81 T 09-03-2017 IPR029066 PLP-binding barrel BV404_RS14665 2ea5b8c1376c6174104ee43079f9774f 417 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 288 390 4.3E-17 T 09-03-2017 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 BV404_RS14665 2ea5b8c1376c6174104ee43079f9774f 417 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 16 413 41.211 T 09-03-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BV404_RS14665 2ea5b8c1376c6174104ee43079f9774f 417 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 5 412 2.1E-168 T 09-03-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BV404_RS14665 2ea5b8c1376c6174104ee43079f9774f 417 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 36 283 7.2E-74 T 09-03-2017 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 BV404_RS14665 2ea5b8c1376c6174104ee43079f9774f 417 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 58 76 - T 09-03-2017 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site BV404_RS11810 068d598c99d20e948862c0f1eb9d259b 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 4.9E-27 T 09-03-2017 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS11810 068d598c99d20e948862c0f1eb9d259b 82 Pfam PF00886 Ribosomal protein S16 8 68 8.0E-24 T 09-03-2017 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS11810 068d598c99d20e948862c0f1eb9d259b 82 SUPERFAMILY SSF54565 1 76 4.58E-28 T 09-03-2017 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS11810 068d598c99d20e948862c0f1eb9d259b 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 23.071 T 09-03-2017 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS11810 068d598c99d20e948862c0f1eb9d259b 82 Gene3D G3DSA:3.30.1320.10 1 79 1.9E-32 T 09-03-2017 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS11810 068d598c99d20e948862c0f1eb9d259b 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 09-03-2017 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS02680 30b16d710d3eb4d839a8911b74e1e728 377 PIRSF PIRSF037565 1 377 5.1E-170 T 09-03-2017 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 BV404_RS02680 30b16d710d3eb4d839a8911b74e1e728 377 Pfam PF05175 Methyltransferase small domain 200 373 1.7E-52 T 09-03-2017 IPR007848 Methyltransferase small domain GO:0008168 BV404_RS02680 30b16d710d3eb4d839a8911b74e1e728 377 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 2 376 49.15 T 09-03-2017 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 BV404_RS02680 30b16d710d3eb4d839a8911b74e1e728 377 Gene3D G3DSA:3.40.50.150 193 373 1.2E-22 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS02680 30b16d710d3eb4d839a8911b74e1e728 377 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 303 309 - T 09-03-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BV404_RS02680 30b16d710d3eb4d839a8911b74e1e728 377 SUPERFAMILY SSF53335 197 352 1.15E-25 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS09690 7514f29271636c3296df8e8b906f1676 329 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 6 329 1.3E-103 T 09-03-2017 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BV404_RS09690 7514f29271636c3296df8e8b906f1676 329 Gene3D G3DSA:3.20.20.70 5 305 2.2E-69 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS09690 7514f29271636c3296df8e8b906f1676 329 Pfam PF06463 Molybdenum Cofactor Synthesis C 186 312 1.6E-38 T 09-03-2017 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BV404_RS09690 7514f29271636c3296df8e8b906f1676 329 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 5 329 36.459 T 09-03-2017 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BV404_RS09690 7514f29271636c3296df8e8b906f1676 329 Pfam PF04055 Radical SAM superfamily 19 181 2.9E-25 T 09-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 BV404_RS09690 7514f29271636c3296df8e8b906f1676 329 SUPERFAMILY SSF102114 7 278 3.01E-68 T 09-03-2017 BV404_RS09690 7514f29271636c3296df8e8b906f1676 329 Pfam PF13353 4Fe-4S single cluster domain 23 125 3.4E-8 T 09-03-2017 BV404_RS09690 7514f29271636c3296df8e8b906f1676 329 SMART SM00729 14 211 4.1E-4 T 09-03-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 BV404_RS06100 eb36afb97e626ab1098c83ef8b6c699e 381 Pfam PF13416 Bacterial extracellular solute-binding protein 54 342 5.3E-28 T 09-03-2017 BV404_RS06100 eb36afb97e626ab1098c83ef8b6c699e 381 Gene3D G3DSA:3.40.190.10 151 312 8.8E-15 T 09-03-2017 BV404_RS06100 eb36afb97e626ab1098c83ef8b6c699e 381 SUPERFAMILY SSF53850 31 377 1.87E-43 T 09-03-2017 BV404_RS06100 eb36afb97e626ab1098c83ef8b6c699e 381 Gene3D G3DSA:3.40.190.10 30 150 8.1E-21 T 09-03-2017 BV404_RS06100 eb36afb97e626ab1098c83ef8b6c699e 381 Gene3D G3DSA:3.40.190.10 313 342 8.1E-21 T 09-03-2017 BV404_RS06100 eb36afb97e626ab1098c83ef8b6c699e 381 PIRSF PIRSF029172 1 380 8.8E-171 T 09-03-2017 IPR027020 Protein ynjB BV404_RS13865 9d26e4cce6b72857a216d6d71b9ef566 83 Pfam PF04380 Membrane fusogenic activity 1 78 1.7E-28 T 09-03-2017 IPR007475 Membrane fusogenic activity BV404_RS03530 723a0203aae0cfaa6f518b85e7c696fa 377 PRINTS PR00207 Flagellin signature 37 54 2.5E-27 T 09-03-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BV404_RS03530 723a0203aae0cfaa6f518b85e7c696fa 377 PRINTS PR00207 Flagellin signature 111 134 2.5E-27 T 09-03-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BV404_RS03530 723a0203aae0cfaa6f518b85e7c696fa 377 PRINTS PR00207 Flagellin signature 76 95 2.5E-27 T 09-03-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BV404_RS03530 723a0203aae0cfaa6f518b85e7c696fa 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 2.5E-41 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BV404_RS03530 723a0203aae0cfaa6f518b85e7c696fa 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 7.9E-26 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BV404_RS03530 723a0203aae0cfaa6f518b85e7c696fa 377 Gene3D G3DSA:1.20.1330.10 279 332 1.3E-57 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BV404_RS03530 723a0203aae0cfaa6f518b85e7c696fa 377 Gene3D G3DSA:1.20.1330.10 55 171 1.3E-57 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BV404_RS03530 723a0203aae0cfaa6f518b85e7c696fa 377 Pfam PF07196 Flagellin hook IN motif 194 249 2.0E-12 T 09-03-2017 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 BV404_RS03530 723a0203aae0cfaa6f518b85e7c696fa 377 SUPERFAMILY SSF64518 1 376 2.22E-95 T 09-03-2017 BV404_RS10495 9a52e675960c292df2fd3df36cbf5efd 344 SMART SM00930 265 340 1.5E-25 T 09-03-2017 IPR018449 NIL domain BV404_RS10495 9a52e675960c292df2fd3df36cbf5efd 344 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 4.7E-198 T 09-03-2017 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 BV404_RS10495 9a52e675960c292df2fd3df36cbf5efd 344 Pfam PF09383 NIL domain 268 339 1.2E-20 T 09-03-2017 IPR018449 NIL domain BV404_RS10495 9a52e675960c292df2fd3df36cbf5efd 344 Gene3D G3DSA:3.40.50.300 1 236 2.4E-83 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS10495 9a52e675960c292df2fd3df36cbf5efd 344 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS10495 9a52e675960c292df2fd3df36cbf5efd 344 SUPERFAMILY SSF52540 1 239 1.39E-83 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS10495 9a52e675960c292df2fd3df36cbf5efd 344 SMART SM00382 30 235 3.1E-13 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS10495 9a52e675960c292df2fd3df36cbf5efd 344 Pfam PF00005 ABC transporter 21 169 2.9E-36 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS10495 9a52e675960c292df2fd3df36cbf5efd 344 SUPERFAMILY SSF55021 248 343 3.09E-25 T 09-03-2017 BV404_RS10495 9a52e675960c292df2fd3df36cbf5efd 344 Gene3D G3DSA:3.30.70.260 237 343 6.3E-31 T 09-03-2017 BV404_RS13995 e4adecfd23607c0067ccddf6caa3b60f 481 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 464 9.7E-113 T 09-03-2017 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 BV404_RS13995 e4adecfd23607c0067ccddf6caa3b60f 481 PIRSF PIRSF006247 1 481 8.8E-169 T 09-03-2017 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 BV404_RS13995 e4adecfd23607c0067ccddf6caa3b60f 481 Pfam PF02386 Cation transport protein 47 475 9.6E-51 T 09-03-2017 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 BV404_RS07300 8f3333b3796e5c6f1a5d7ff51b3fdbba 638 Gene3D G3DSA:3.40.50.300 318 536 1.6E-48 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS07300 8f3333b3796e5c6f1a5d7ff51b3fdbba 638 Gene3D G3DSA:3.40.50.300 2 271 4.6E-50 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS07300 8f3333b3796e5c6f1a5d7ff51b3fdbba 638 SMART SM00382 344 514 1.3E-13 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS07300 8f3333b3796e5c6f1a5d7ff51b3fdbba 638 SMART SM00382 28 230 3.4E-15 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS07300 8f3333b3796e5c6f1a5d7ff51b3fdbba 638 Pfam PF16326 ABC transporter C-terminal domain 564 633 1.6E-21 T 09-03-2017 IPR032524 ABC transporter Uup, C-terminal GO:0003677 BV404_RS07300 8f3333b3796e5c6f1a5d7ff51b3fdbba 638 SUPERFAMILY SSF52540 311 517 1.26E-46 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS07300 8f3333b3796e5c6f1a5d7ff51b3fdbba 638 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS07300 8f3333b3796e5c6f1a5d7ff51b3fdbba 638 Pfam PF00005 ABC transporter 336 469 1.6E-25 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS07300 8f3333b3796e5c6f1a5d7ff51b3fdbba 638 Pfam PF00005 ABC transporter 19 185 1.7E-24 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS07300 8f3333b3796e5c6f1a5d7ff51b3fdbba 638 SUPERFAMILY SSF52540 126 239 1.05E-46 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS07300 8f3333b3796e5c6f1a5d7ff51b3fdbba 638 SUPERFAMILY SSF52540 3 94 1.05E-46 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS07300 8f3333b3796e5c6f1a5d7ff51b3fdbba 638 Pfam PF12848 ABC transporter 224 295 8.5E-13 T 09-03-2017 IPR032781 ABC-transporter extension domain BV404_RS07300 8f3333b3796e5c6f1a5d7ff51b3fdbba 638 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS01855 5c3ff38a52a28e87459ca60d34da2ed6 476 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 6.1E-18 T 09-03-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BV404_RS01855 5c3ff38a52a28e87459ca60d34da2ed6 476 Pfam PF01467 Cytidylyltransferase-like 345 470 8.0E-16 T 09-03-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BV404_RS01855 5c3ff38a52a28e87459ca60d34da2ed6 476 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 09-03-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 BV404_RS01855 5c3ff38a52a28e87459ca60d34da2ed6 476 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 331 472 6.1E-62 T 09-03-2017 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 BV404_RS01855 5c3ff38a52a28e87459ca60d34da2ed6 476 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 42.863 T 09-03-2017 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 BV404_RS01855 5c3ff38a52a28e87459ca60d34da2ed6 476 Pfam PF00294 pfkB family carbohydrate kinase 13 302 1.2E-48 T 09-03-2017 IPR011611 Carbohydrate kinase PfkB BV404_RS01855 5c3ff38a52a28e87459ca60d34da2ed6 476 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 7 312 1.2E-125 T 09-03-2017 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 BV404_RS01855 5c3ff38a52a28e87459ca60d34da2ed6 476 Gene3D G3DSA:3.40.1190.20 13 313 7.7E-67 T 09-03-2017 IPR029056 Ribokinase-like BV404_RS01855 5c3ff38a52a28e87459ca60d34da2ed6 476 Gene3D G3DSA:3.40.50.620 340 461 4.6E-36 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS01855 5c3ff38a52a28e87459ca60d34da2ed6 476 SUPERFAMILY SSF52374 340 471 4.22E-24 T 09-03-2017 BV404_RS01855 5c3ff38a52a28e87459ca60d34da2ed6 476 SUPERFAMILY SSF53613 12 305 2.81E-58 T 09-03-2017 IPR029056 Ribokinase-like BV404_RS11865 3b8aefd4536d7b8bd7f817f31c87a670 595 SUPERFAMILY SSF51230 517 594 4.32E-20 T 09-03-2017 IPR011053 Single hybrid motif BV404_RS11865 3b8aefd4536d7b8bd7f817f31c87a670 595 SUPERFAMILY SSF51569 1 300 3.3E-89 T 09-03-2017 BV404_RS11865 3b8aefd4536d7b8bd7f817f31c87a670 595 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 551 568 - T 09-03-2017 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BV404_RS11865 3b8aefd4536d7b8bd7f817f31c87a670 595 Gene3D G3DSA:2.40.50.100 525 594 7.1E-24 T 09-03-2017 BV404_RS11865 3b8aefd4536d7b8bd7f817f31c87a670 595 SUPERFAMILY SSF89000 297 456 1.06E-49 T 09-03-2017 BV404_RS11865 3b8aefd4536d7b8bd7f817f31c87a670 595 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 7 589 1.0E-264 T 09-03-2017 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 BV404_RS11865 3b8aefd4536d7b8bd7f817f31c87a670 595 Pfam PF02436 Conserved carboxylase domain 292 493 4.4E-57 T 09-03-2017 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 BV404_RS11865 3b8aefd4536d7b8bd7f817f31c87a670 595 Pfam PF00364 Biotin-requiring enzyme 529 593 1.4E-16 T 09-03-2017 IPR000089 Biotin/lipoyl attachment BV404_RS11865 3b8aefd4536d7b8bd7f817f31c87a670 595 Pfam PF00682 HMGL-like 6 269 1.2E-58 T 09-03-2017 IPR000891 Pyruvate carboxyltransferase GO:0003824 BV404_RS11865 3b8aefd4536d7b8bd7f817f31c87a670 595 Gene3D G3DSA:3.20.20.70 2 282 5.4E-114 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS03795 500eb991a1c2ffc5d7b7238a7f90d8a8 236 Pfam PF13534 4Fe-4S dicluster domain 146 219 2.7E-10 T 09-03-2017 BV404_RS03795 500eb991a1c2ffc5d7b7238a7f90d8a8 236 Gene3D G3DSA:3.10.20.30 1 104 3.6E-36 T 09-03-2017 IPR012675 Beta-grasp domain BV404_RS03795 500eb991a1c2ffc5d7b7238a7f90d8a8 236 Gene3D G3DSA:1.10.1060.10 105 234 2.4E-46 T 09-03-2017 BV404_RS03795 500eb991a1c2ffc5d7b7238a7f90d8a8 236 SUPERFAMILY SSF46548 105 233 4.19E-40 T 09-03-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 BV404_RS03795 500eb991a1c2ffc5d7b7238a7f90d8a8 236 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 8 228 1.4E-85 T 09-03-2017 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 BV404_RS03795 500eb991a1c2ffc5d7b7238a7f90d8a8 236 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BV404_RS03795 500eb991a1c2ffc5d7b7238a7f90d8a8 236 SUPERFAMILY SSF54292 1 104 4.04E-29 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 BV404_RS03795 500eb991a1c2ffc5d7b7238a7f90d8a8 236 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 109 9.0E-30 T 09-03-2017 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 BV404_RS05120 0e1d40276b19c67c5065c708f0b3bd67 449 SUPERFAMILY SSF52777 195 432 2.27E-28 T 09-03-2017 BV404_RS05120 0e1d40276b19c67c5065c708f0b3bd67 449 Pfam PF00668 Condensation domain 11 308 2.5E-34 T 09-03-2017 IPR001242 Condensation domain BV404_RS05120 0e1d40276b19c67c5065c708f0b3bd67 449 SUPERFAMILY SSF52777 13 188 1.56E-28 T 09-03-2017 BV404_RS01590 44bba41310413f43fc5919ae08fed63e 262 Pfam PF04784 Protein of unknown function, DUF547 87 198 5.0E-27 T 09-03-2017 IPR006869 Domain of unknown function DUF547 BV404_RS02305 ed4cd3516c561c4fe0a390ccb09d597a 337 Pfam PF01136 Peptidase family U32 75 336 9.8E-72 T 09-03-2017 IPR001539 Peptidase U32 GO:0006508|GO:0008233 BV404_RS02305 ed4cd3516c561c4fe0a390ccb09d597a 337 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 09-03-2017 IPR001539 Peptidase U32 GO:0006508|GO:0008233 BV404_RS04355 e37ff24d4e655d21183beb310616f2cb 224 PIRSF PIRSF037290 1 223 1.9E-56 T 09-03-2017 IPR017166 Uncharacterised conserved protein UCP037290 BV404_RS04355 e37ff24d4e655d21183beb310616f2cb 224 Gene3D G3DSA:3.40.50.300 46 155 2.0E-34 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS04355 e37ff24d4e655d21183beb310616f2cb 224 SUPERFAMILY SSF52540 47 155 2.39E-26 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS07640 6d06d7be762e394ef39ec4105ea9e7b4 220 ProSitePatterns PS01243 Bax inhibitor-1 family signature. 88 118 - T 09-03-2017 IPR006213 Bax inhibitor 1, conserved site GO:0016021|GO:0043066 BV404_RS07640 6d06d7be762e394ef39ec4105ea9e7b4 220 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 214 1.7E-42 T 09-03-2017 BV404_RS21595 bd6320ae53c9ca07f91e6c063e2d5458 296 SUPERFAMILY SSF56801 1 287 2.49E-70 T 09-03-2017 BV404_RS21595 bd6320ae53c9ca07f91e6c063e2d5458 296 PRINTS PR00154 AMP-binding signature 127 135 9.8E-5 T 09-03-2017 IPR020459 AMP-binding BV404_RS21595 bd6320ae53c9ca07f91e6c063e2d5458 296 PRINTS PR00154 AMP-binding signature 115 126 9.8E-5 T 09-03-2017 IPR020459 AMP-binding BV404_RS21595 bd6320ae53c9ca07f91e6c063e2d5458 296 Pfam PF00501 AMP-binding enzyme 1 283 5.6E-48 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 BV404_RS21595 bd6320ae53c9ca07f91e6c063e2d5458 296 Gene3D G3DSA:3.40.50.980 2 125 4.9E-20 T 09-03-2017 BV404_RS21595 bd6320ae53c9ca07f91e6c063e2d5458 296 Gene3D G3DSA:3.40.50.980 126 285 4.9E-30 T 09-03-2017 BV404_RS21595 bd6320ae53c9ca07f91e6c063e2d5458 296 ProSitePatterns PS00455 Putative AMP-binding domain signature. 120 131 - T 09-03-2017 IPR020845 AMP-binding, conserved site BV404_RS04750 db3a44e0d512bd7372986e2d7180218e 148 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 36 140 2.2E-43 T 09-03-2017 BV404_RS19360 527c97e776bc466e4816fd86252201f0 169 Pfam PF00771 FHIPEP family 2 168 3.0E-40 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BV404_RS06445 f578bca638414ad3f09e133fb812e4be 182 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 28 6.1E-6 T 09-03-2017 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal BV404_RS06445 f578bca638414ad3f09e133fb812e4be 182 Gene3D G3DSA:3.30.1380.10 52 180 1.6E-32 T 09-03-2017 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 BV404_RS06445 f578bca638414ad3f09e133fb812e4be 182 Pfam PF05951 Bacterial protein of unknown function (DUF882) 31 179 5.7E-70 T 09-03-2017 IPR010275 Protein of unknown function DUF882 BV404_RS06445 f578bca638414ad3f09e133fb812e4be 182 SUPERFAMILY SSF55166 52 181 9.42E-35 T 09-03-2017 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 BV404_RS03555 67e5e42d56193d7a05548fa8744de160 136 TIGRFAM TIGR00208 fliS: flagellar protein FliS 4 122 2.3E-23 T 09-03-2017 IPR003713 Flagellar protein FliS GO:0044780 BV404_RS03555 67e5e42d56193d7a05548fa8744de160 136 PIRSF PIRSF039090 1 133 2.0E-43 T 09-03-2017 IPR003713 Flagellar protein FliS GO:0044780 BV404_RS03555 67e5e42d56193d7a05548fa8744de160 136 SUPERFAMILY SSF101116 6 127 4.71E-39 T 09-03-2017 IPR003713 Flagellar protein FliS GO:0044780 BV404_RS03555 67e5e42d56193d7a05548fa8744de160 136 Gene3D G3DSA:1.20.120.340 6 127 5.2E-42 T 09-03-2017 IPR003713 Flagellar protein FliS GO:0044780 BV404_RS03555 67e5e42d56193d7a05548fa8744de160 136 Pfam PF02561 Flagellar protein FliS 6 122 1.8E-37 T 09-03-2017 IPR003713 Flagellar protein FliS GO:0044780 BV404_RS04730 43204fca4ea18d981389dd640b40b73b 146 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 8 142 2.8E-20 T 09-03-2017 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 BV404_RS13555 a90ca03c5710f9c523c8a67f38f728e5 237 SUPERFAMILY SSF56112 47 235 4.05E-20 T 09-03-2017 IPR011009 Protein kinase-like domain BV404_RS13555 a90ca03c5710f9c523c8a67f38f728e5 237 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 31 233 5.2E-69 T 09-03-2017 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 Reactome: R-HSA-6782315|Reactome: R-HSA-6804756 BV404_RS13555 a90ca03c5710f9c523c8a67f38f728e5 237 Gene3D G3DSA:1.10.510.10 142 225 2.4E-15 T 09-03-2017 BV404_RS13555 a90ca03c5710f9c523c8a67f38f728e5 237 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 2 235 42.381 T 09-03-2017 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676 BV404_RS12530 fff870a23b1b66dc6ebcbe28ecfe3877 275 Gene3D G3DSA:3.60.110.10 3 267 1.5E-86 T 09-03-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 BV404_RS12530 fff870a23b1b66dc6ebcbe28ecfe3877 275 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 149 169 - T 09-03-2017 IPR001110 Uncharacterised protein family UPF0012, conserved site BV404_RS12530 fff870a23b1b66dc6ebcbe28ecfe3877 275 Pfam PF00795 Carbon-nitrogen hydrolase 3 255 3.0E-54 T 09-03-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 BV404_RS12530 fff870a23b1b66dc6ebcbe28ecfe3877 275 SUPERFAMILY SSF56317 3 263 7.85E-81 T 09-03-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 BV404_RS14535 8cef5e11b3574ba29482e52510a3e3f5 301 SUPERFAMILY SSF103481 189 292 8.11E-12 T 09-03-2017 BV404_RS14535 8cef5e11b3574ba29482e52510a3e3f5 301 Pfam PF00892 EamA-like transporter family 9 141 3.5E-17 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 BV404_RS14535 8cef5e11b3574ba29482e52510a3e3f5 301 Pfam PF00892 EamA-like transporter family 155 286 8.4E-19 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 BV404_RS14535 8cef5e11b3574ba29482e52510a3e3f5 301 SUPERFAMILY SSF103481 42 144 2.48E-13 T 09-03-2017 BV404_RS06510 daf5fa01cc5139738f7a2eb442e156a8 629 Pfam PF00027 Cyclic nucleotide-binding domain 37 119 1.2E-14 T 09-03-2017 IPR000595 Cyclic nucleotide-binding domain BV404_RS06510 daf5fa01cc5139738f7a2eb442e156a8 629 SMART SM00100 17 134 6.2E-8 T 09-03-2017 IPR000595 Cyclic nucleotide-binding domain BV404_RS06510 daf5fa01cc5139738f7a2eb442e156a8 629 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 479 622 5.9E-46 T 09-03-2017 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding BV404_RS06510 daf5fa01cc5139738f7a2eb442e156a8 629 SMART SM00116 159 216 0.014 T 09-03-2017 IPR000644 CBS domain BV404_RS06510 daf5fa01cc5139738f7a2eb442e156a8 629 SMART SM00116 233 280 1.8E-6 T 09-03-2017 IPR000644 CBS domain BV404_RS06510 daf5fa01cc5139738f7a2eb442e156a8 629 Gene3D G3DSA:3.10.580.10 151 281 2.1E-30 T 09-03-2017 BV404_RS06510 daf5fa01cc5139738f7a2eb442e156a8 629 Gene3D G3DSA:2.60.120.10 7 139 2.7E-24 T 09-03-2017 IPR014710 RmlC-like jelly roll fold BV404_RS06510 daf5fa01cc5139738f7a2eb442e156a8 629 Pfam PF03445 Putative nucleotidyltransferase DUF294 305 442 2.5E-45 T 09-03-2017 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 BV404_RS06510 daf5fa01cc5139738f7a2eb442e156a8 629 SUPERFAMILY SSF54631 150 278 6.95E-28 T 09-03-2017 BV404_RS06510 daf5fa01cc5139738f7a2eb442e156a8 629 SUPERFAMILY SSF51206 7 129 1.3E-27 T 09-03-2017 IPR018490 Cyclic nucleotide-binding-like BV404_RS06510 daf5fa01cc5139738f7a2eb442e156a8 629 Pfam PF00571 CBS domain 226 278 3.6E-11 T 09-03-2017 IPR000644 CBS domain BV404_RS06510 daf5fa01cc5139738f7a2eb442e156a8 629 Pfam PF00571 CBS domain 152 215 1.6E-8 T 09-03-2017 IPR000644 CBS domain BV404_RS12310 b3e6d7124bf79dc443e00756c1cae00a 143 Pfam PF14467 Domain of unknown function (DUF4426) 25 142 4.1E-48 T 09-03-2017 IPR025218 Domain of unknown function DUF4426 BV404_RS01220 30f13a3465806ed5fcc8ca4090073891 536 SUPERFAMILY SSF161098 14 258 1.57E-39 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS01220 30f13a3465806ed5fcc8ca4090073891 536 SUPERFAMILY SSF161098 277 523 2.94E-32 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS01220 30f13a3465806ed5fcc8ca4090073891 536 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 9 518 1.9E-161 T 09-03-2017 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 BV404_RS01220 30f13a3465806ed5fcc8ca4090073891 536 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 65 258 4.8E-8 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS01220 30f13a3465806ed5fcc8ca4090073891 536 Gene3D G3DSA:1.10.3720.10 15 256 6.1E-34 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS01220 30f13a3465806ed5fcc8ca4090073891 536 Gene3D G3DSA:1.10.3720.10 283 525 1.6E-30 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS05300 d58c28d7db2500c321ac2cd295f7c24f 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 240 2.3E-57 T 09-03-2017 BV404_RS05300 d58c28d7db2500c321ac2cd295f7c24f 241 TIGRFAM TIGR01831 fabG_rel: putative 3-oxoacyl-(acyl-carrier-protein) reductase 5 241 1.4E-127 T 09-03-2017 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 BV404_RS05300 d58c28d7db2500c321ac2cd295f7c24f 241 SUPERFAMILY SSF51735 3 240 3.12E-74 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS05300 d58c28d7db2500c321ac2cd295f7c24f 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 3.1E-10 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS05300 d58c28d7db2500c321ac2cd295f7c24f 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 3.1E-10 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS05300 d58c28d7db2500c321ac2cd295f7c24f 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 3.1E-10 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS05300 d58c28d7db2500c321ac2cd295f7c24f 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.1E-42 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS05300 d58c28d7db2500c321ac2cd295f7c24f 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.1E-42 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS05300 d58c28d7db2500c321ac2cd295f7c24f 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.1E-42 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS05300 d58c28d7db2500c321ac2cd295f7c24f 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 2.1E-42 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS05300 d58c28d7db2500c321ac2cd295f7c24f 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.1E-42 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS05300 d58c28d7db2500c321ac2cd295f7c24f 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.1E-42 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS05300 d58c28d7db2500c321ac2cd295f7c24f 241 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 194 0.0026 T 09-03-2017 BV404_RS05300 d58c28d7db2500c321ac2cd295f7c24f 241 Gene3D G3DSA:3.40.50.720 4 240 4.0E-74 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS12910 893e141ef8be909a907f3aa7b0de1203 75 Hamap MF_00715 Protein SlyX [slyX]. 8 75 16.696 T 09-03-2017 IPR007236 SlyX BV404_RS12910 893e141ef8be909a907f3aa7b0de1203 75 Gene3D G3DSA:1.20.5.300 7 55 6.9E-22 T 09-03-2017 BV404_RS12910 893e141ef8be909a907f3aa7b0de1203 75 Pfam PF04102 SlyX 11 75 2.0E-23 T 09-03-2017 IPR007236 SlyX BV404_RS03695 33b26879ab030b7da3464dd773737902 672 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 5 661 27.652 T 09-03-2017 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 BV404_RS03695 33b26879ab030b7da3464dd773737902 672 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 265 666 2.1E-152 T 09-03-2017 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 BV404_RS03695 33b26879ab030b7da3464dd773737902 672 SUPERFAMILY SSF51905 265 481 1.46E-29 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS03695 33b26879ab030b7da3464dd773737902 672 SUPERFAMILY SSF51905 574 663 1.46E-29 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS03695 33b26879ab030b7da3464dd773737902 672 Pfam PF01266 FAD dependent oxidoreductase 265 636 1.2E-43 T 09-03-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 BV404_RS03695 33b26879ab030b7da3464dd773737902 672 Gene3D G3DSA:3.40.50.150 9 248 1.1E-100 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS03695 33b26879ab030b7da3464dd773737902 672 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 116 241 1.1E-46 T 09-03-2017 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 BV404_RS03695 33b26879ab030b7da3464dd773737902 672 Gene3D G3DSA:3.50.50.60 265 339 8.5E-25 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS03695 33b26879ab030b7da3464dd773737902 672 Gene3D G3DSA:3.50.50.60 395 480 8.5E-25 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS03695 33b26879ab030b7da3464dd773737902 672 Gene3D G3DSA:3.50.50.60 574 651 8.5E-25 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS00575 d1f74282ea4e7f0562b297ebf11ce334 305 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 13 296 1.1E-97 T 09-03-2017 BV404_RS00575 d1f74282ea4e7f0562b297ebf11ce334 305 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 4 298 20.862 T 09-03-2017 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 BV404_RS00575 d1f74282ea4e7f0562b297ebf11ce334 305 PIRSF PIRSF005355 1 303 1.1E-83 T 09-03-2017 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 BV404_RS00575 d1f74282ea4e7f0562b297ebf11ce334 305 Pfam PF01040 UbiA prenyltransferase family 21 269 4.2E-39 T 09-03-2017 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 BV404_RS00805 095d3828dca87b9af39e504d935a9026 226 Gene3D G3DSA:3.40.50.1000 94 222 4.7E-44 T 09-03-2017 IPR023214 HAD-like domain BV404_RS00805 095d3828dca87b9af39e504d935a9026 226 Gene3D G3DSA:3.40.50.1000 2 31 4.7E-44 T 09-03-2017 IPR023214 HAD-like domain BV404_RS00805 095d3828dca87b9af39e504d935a9026 226 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 99 187 3.9E-10 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 BV404_RS00805 095d3828dca87b9af39e504d935a9026 226 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 191 2.1E-37 T 09-03-2017 IPR023214 HAD-like domain BV404_RS00805 095d3828dca87b9af39e504d935a9026 226 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 7 221 5.0E-58 T 09-03-2017 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 BV404_RS00805 095d3828dca87b9af39e504d935a9026 226 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 4 223 34.535 T 09-03-2017 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 BV404_RS00805 095d3828dca87b9af39e504d935a9026 226 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 80 192 4.4E-11 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 BV404_RS00805 095d3828dca87b9af39e504d935a9026 226 SUPERFAMILY SSF56784 3 222 1.94E-58 T 09-03-2017 IPR023214 HAD-like domain BV404_RS00805 095d3828dca87b9af39e504d935a9026 226 Gene3D G3DSA:1.10.150.240 32 87 1.4E-20 T 09-03-2017 IPR023198 Phosphoglycolate phosphatase, domain 2 BV404_RS00805 095d3828dca87b9af39e504d935a9026 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 155 175 5.5E-9 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 BV404_RS00805 095d3828dca87b9af39e504d935a9026 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 5.5E-9 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 BV404_RS00805 095d3828dca87b9af39e504d935a9026 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 5.5E-9 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 BV404_RS00805 095d3828dca87b9af39e504d935a9026 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 5.5E-9 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 BV404_RS00805 095d3828dca87b9af39e504d935a9026 226 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 80 191 1.8E-12 T 09-03-2017 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 BV404_RS14650 c9ed1282b079ac07f843a19eff9577dc 842 PIRSF PIRSF001444 1 842 0.0 T 09-03-2017 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 BV404_RS14650 c9ed1282b079ac07f843a19eff9577dc 842 Pfam PF01295 Adenylate cyclase, class-I 226 828 2.5E-252 T 09-03-2017 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 BV404_RS14650 c9ed1282b079ac07f843a19eff9577dc 842 Pfam PF12633 Adenylate cyclase NT domain 6 198 1.4E-77 T 09-03-2017 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 BV404_RS06565 1a3849cb9b608a16b1ff6593044735fa 453 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 3.0E-226 T 09-03-2017 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 BV404_RS06565 1a3849cb9b608a16b1ff6593044735fa 453 Pfam PF03313 Serine dehydratase alpha chain 184 448 6.6E-98 T 09-03-2017 IPR005130 Serine dehydratase-like, alpha subunit BV404_RS06565 1a3849cb9b608a16b1ff6593044735fa 453 Gene3D G3DSA:3.30.1330.90 10 157 8.1E-52 T 09-03-2017 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 BV404_RS06565 1a3849cb9b608a16b1ff6593044735fa 453 Pfam PF03315 Serine dehydratase beta chain 3 155 3.5E-54 T 09-03-2017 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 BV404_RS06565 1a3849cb9b608a16b1ff6593044735fa 453 SUPERFAMILY SSF143548 16 157 6.28E-44 T 09-03-2017 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 BV404_RS10685 ad0f186ead010a215db28b0ae905cb56 179 Pfam PF14437 MafB19-like deaminase 12 157 1.4E-30 T 09-03-2017 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 BV404_RS10685 ad0f186ead010a215db28b0ae905cb56 179 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 16 157 45.131 T 09-03-2017 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 BV404_RS10685 ad0f186ead010a215db28b0ae905cb56 179 SUPERFAMILY SSF53927 8 161 1.57E-55 T 09-03-2017 IPR016193 Cytidine deaminase-like GO:0003824 BV404_RS10685 ad0f186ead010a215db28b0ae905cb56 179 Gene3D G3DSA:3.40.140.10 5 155 5.7E-59 T 09-03-2017 BV404_RS10685 ad0f186ead010a215db28b0ae905cb56 179 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 61 98 - T 09-03-2017 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 BV404_RS08575 dd4de78b9fb3b0521a29298626387367 508 SMART SM00052 244 489 2.5E-82 T 09-03-2017 IPR001633 EAL domain BV404_RS08575 dd4de78b9fb3b0521a29298626387367 508 Pfam PF00563 EAL domain 251 484 9.2E-59 T 09-03-2017 IPR001633 EAL domain BV404_RS08575 dd4de78b9fb3b0521a29298626387367 508 Gene3D G3DSA:3.20.20.450 247 492 1.3E-70 T 09-03-2017 IPR001633 EAL domain BV404_RS08575 dd4de78b9fb3b0521a29298626387367 508 SUPERFAMILY SSF141868 250 495 8.89E-69 T 09-03-2017 IPR001633 EAL domain BV404_RS05275 8eec5dbc618ceed558e5e16d61c7978f 254 SMART SM00052 9 251 1.4E-22 T 09-03-2017 IPR001633 EAL domain BV404_RS05275 8eec5dbc618ceed558e5e16d61c7978f 254 Pfam PF00563 EAL domain 25 242 4.2E-49 T 09-03-2017 IPR001633 EAL domain BV404_RS05275 8eec5dbc618ceed558e5e16d61c7978f 254 SUPERFAMILY SSF141868 25 242 1.24E-59 T 09-03-2017 IPR001633 EAL domain BV404_RS05275 8eec5dbc618ceed558e5e16d61c7978f 254 Gene3D G3DSA:3.20.20.450 25 242 1.1E-49 T 09-03-2017 IPR001633 EAL domain BV404_RS09410 51242c91bdc35301591358b4b707d4e4 615 SUPERFAMILY SSF55486 3 550 3.39E-72 T 09-03-2017 BV404_RS09410 51242c91bdc35301591358b4b707d4e4 615 Gene3D G3DSA:1.10.1370.10 128 261 1.6E-22 T 09-03-2017 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 BV404_RS09410 51242c91bdc35301591358b4b707d4e4 615 Gene3D G3DSA:1.10.1370.10 376 547 1.6E-22 T 09-03-2017 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 BV404_RS09410 51242c91bdc35301591358b4b707d4e4 615 Pfam PF01432 Peptidase family M3 284 490 8.5E-13 T 09-03-2017 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 BV404_RS09410 51242c91bdc35301591358b4b707d4e4 615 Gene3D G3DSA:3.40.390.10 281 375 2.3E-12 T 09-03-2017 IPR024079 Metallopeptidase, catalytic domain GO:0008237 BV404_RS02910 76f68312ea4a2d9c6243c1dd8ffae197 250 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 11 239 39.545 T 09-03-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 BV404_RS02910 76f68312ea4a2d9c6243c1dd8ffae197 250 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 11 238 3.9E-95 T 09-03-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 BV404_RS02910 76f68312ea4a2d9c6243c1dd8ffae197 250 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 184 201 - T 09-03-2017 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 BV404_RS02910 76f68312ea4a2d9c6243c1dd8ffae197 250 Pfam PF01255 Putative undecaprenyl diphosphate synthase 18 238 3.6E-81 T 09-03-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 BV404_RS02910 76f68312ea4a2d9c6243c1dd8ffae197 250 SUPERFAMILY SSF64005 11 234 2.09E-88 T 09-03-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 BV404_RS02910 76f68312ea4a2d9c6243c1dd8ffae197 250 Gene3D G3DSA:3.40.1180.10 4 245 7.2E-100 T 09-03-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 BV404_RS03465 42c323ea335343873e28c3f93fc1d585 66 Pfam PF11446 Protein of unknown function (DUF2897) 6 53 1.1E-14 T 09-03-2017 IPR021550 Protein of unknown function DUF2897 BV404_RS03350 0e375f0d1d057f6d9f7cc502dcbe8801 295 Gene3D G3DSA:3.30.230.10 12 166 3.1E-52 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BV404_RS03350 0e375f0d1d057f6d9f7cc502dcbe8801 295 SUPERFAMILY SSF55060 168 282 4.41E-34 T 09-03-2017 IPR013750 GHMP kinase, C-terminal domain BV404_RS03350 0e375f0d1d057f6d9f7cc502dcbe8801 295 PIRSF PIRSF010376 10 285 5.1E-86 T 09-03-2017 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 BV404_RS03350 0e375f0d1d057f6d9f7cc502dcbe8801 295 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 11 284 6.3E-92 T 09-03-2017 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 BV404_RS03350 0e375f0d1d057f6d9f7cc502dcbe8801 295 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 11 272 31.884 T 09-03-2017 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 BV404_RS03350 0e375f0d1d057f6d9f7cc502dcbe8801 295 Gene3D G3DSA:3.30.70.890 168 284 1.9E-40 T 09-03-2017 IPR013750 GHMP kinase, C-terminal domain BV404_RS03350 0e375f0d1d057f6d9f7cc502dcbe8801 295 Pfam PF00288 GHMP kinases N terminal domain 93 150 2.5E-7 T 09-03-2017 IPR006204 GHMP kinase N-terminal domain GO:0005524 BV404_RS03350 0e375f0d1d057f6d9f7cc502dcbe8801 295 Pfam PF08544 GHMP kinases C terminal 201 263 1.2E-6 T 09-03-2017 IPR013750 GHMP kinase, C-terminal domain BV404_RS03350 0e375f0d1d057f6d9f7cc502dcbe8801 295 SUPERFAMILY SSF54211 12 164 5.09E-44 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold BV404_RS03820 1a64a79a6009696f194823336cf66d80 260 Pfam PF00950 ABC 3 transport family 1 257 1.5E-76 T 09-03-2017 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 BV404_RS03820 1a64a79a6009696f194823336cf66d80 260 Gene3D G3DSA:1.10.3470.10 52 239 8.7E-9 T 09-03-2017 IPR029022 ABC transporter, BtuC-like BV404_RS03820 1a64a79a6009696f194823336cf66d80 260 SUPERFAMILY SSF81345 2 253 6.15E-39 T 09-03-2017 IPR029022 ABC transporter, BtuC-like BV404_RS12260 67b2738da09cc32486697df664cce9b1 243 Gene3D G3DSA:2.40.240.20 1 71 5.0E-24 T 09-03-2017 BV404_RS12260 67b2738da09cc32486697df664cce9b1 243 SUPERFAMILY SSF88697 2 71 4.72E-16 T 09-03-2017 IPR015947 PUA-like domain BV404_RS12260 67b2738da09cc32486697df664cce9b1 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 3 242 3.2E-86 T 09-03-2017 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 BV404_RS12260 67b2738da09cc32486697df664cce9b1 243 PIRSF PIRSF015601 2 242 1.5E-55 T 09-03-2017 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 BV404_RS12260 67b2738da09cc32486697df664cce9b1 243 SUPERFAMILY SSF75217 75 242 1.31E-52 T 09-03-2017 IPR029028 Alpha/beta knot methyltransferases BV404_RS12260 67b2738da09cc32486697df664cce9b1 243 Pfam PF04452 RNA methyltransferase 20 236 2.7E-76 T 09-03-2017 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 BV404_RS12260 67b2738da09cc32486697df664cce9b1 243 Gene3D G3DSA:3.40.1280.10 75 242 2.2E-60 T 09-03-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BV404_RS13505 719c56683feeba77d30b143ee997c1d0 572 Pfam PF00939 Sodium:sulfate symporter transmembrane region 408 568 1.6E-13 T 09-03-2017 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 BV404_RS13505 719c56683feeba77d30b143ee997c1d0 572 Pfam PF03600 Citrate transporter 18 186 1.0E-15 T 09-03-2017 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 BV404_RS13505 719c56683feeba77d30b143ee997c1d0 572 SUPERFAMILY SSF116726 290 349 1.18E-13 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BV404_RS13505 719c56683feeba77d30b143ee997c1d0 572 SUPERFAMILY SSF116726 198 279 1.57E-13 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BV404_RS13505 719c56683feeba77d30b143ee997c1d0 572 Gene3D G3DSA:3.30.70.1450 204 281 1.2E-12 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BV404_RS13505 719c56683feeba77d30b143ee997c1d0 572 Gene3D G3DSA:3.30.70.1450 289 349 2.5E-16 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BV404_RS13505 719c56683feeba77d30b143ee997c1d0 572 Pfam PF02080 TrkA-C domain 207 273 2.8E-7 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BV404_RS13505 719c56683feeba77d30b143ee997c1d0 572 Pfam PF02080 TrkA-C domain 290 347 2.5E-9 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BV404_RS10375 8ade3a35849286ba137e9c10f38428ae 388 SUPERFAMILY SSF48179 191 287 1.58E-28 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 BV404_RS10375 8ade3a35849286ba137e9c10f38428ae 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 168 9.9E-30 T 09-03-2017 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BV404_RS10375 8ade3a35849286ba137e9c10f38428ae 388 Gene3D G3DSA:3.40.50.720 285 388 4.4E-49 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS10375 8ade3a35849286ba137e9c10f38428ae 388 PIRSF PIRSF000124 1 388 8.4E-135 T 09-03-2017 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 BV404_RS10375 8ade3a35849286ba137e9c10f38428ae 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 375 1.6E-9 T 09-03-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BV404_RS10375 8ade3a35849286ba137e9c10f38428ae 388 Gene3D G3DSA:1.10.1040.10 198 284 3.3E-33 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BV404_RS10375 8ade3a35849286ba137e9c10f38428ae 388 SUPERFAMILY SSF52413 283 388 2.88E-29 T 09-03-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BV404_RS10375 8ade3a35849286ba137e9c10f38428ae 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 5.5E-100 T 09-03-2017 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 BV404_RS10375 8ade3a35849286ba137e9c10f38428ae 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 5.0E-25 T 09-03-2017 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BV404_RS10375 8ade3a35849286ba137e9c10f38428ae 388 PIRSF PIRSF500134 1 348 3.2E-120 T 09-03-2017 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346 BV404_RS10375 8ade3a35849286ba137e9c10f38428ae 388 SUPERFAMILY SSF51735 1 194 1.19E-46 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS10375 8ade3a35849286ba137e9c10f38428ae 388 SMART SM00984 300 387 6.6E-16 T 09-03-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BV404_RS10375 8ade3a35849286ba137e9c10f38428ae 388 Gene3D G3DSA:3.40.50.720 1 197 3.0E-65 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS07990 8fafa613f63c4cbb18720a9a74cf4af2 227 Gene3D G3DSA:3.40.50.720 5 220 8.6E-39 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS07990 8fafa613f63c4cbb18720a9a74cf4af2 227 Pfam PF13460 NAD(P)H-binding 13 159 2.8E-12 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS07990 8fafa613f63c4cbb18720a9a74cf4af2 227 SUPERFAMILY SSF51735 7 210 7.82E-35 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS11995 7dc660f4efb47aa776312440a580b95f 163 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 129 3.3E-29 T 09-03-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 BV404_RS11995 7dc660f4efb47aa776312440a580b95f 163 Gene3D G3DSA:3.30.70.560 3 148 1.7E-37 T 09-03-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 BV404_RS11995 7dc660f4efb47aa776312440a580b95f 163 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 129 3.9E-25 T 09-03-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 BV404_RS11995 7dc660f4efb47aa776312440a580b95f 163 SUPERFAMILY SSF55083 1 148 7.19E-36 T 09-03-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 BV404_RS14035 edce70bd6c6caf66f5f03ec7cc1720a1 297 Pfam PF01553 Acyltransferase 73 226 9.4E-14 T 09-03-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 BV404_RS14035 edce70bd6c6caf66f5f03ec7cc1720a1 297 SMART SM00563 85 227 2.2E-17 T 09-03-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 BV404_RS14035 edce70bd6c6caf66f5f03ec7cc1720a1 297 SUPERFAMILY SSF69593 5 285 1.02E-25 T 09-03-2017 BV404_RS06685 24e427a75b8d3ec8e799eac5af4eb4a5 324 Gene3D G3DSA:3.40.50.2300 24 165 5.2E-35 T 09-03-2017 BV404_RS06685 24e427a75b8d3ec8e799eac5af4eb4a5 324 Gene3D G3DSA:3.40.50.2300 166 312 6.5E-40 T 09-03-2017 BV404_RS06685 24e427a75b8d3ec8e799eac5af4eb4a5 324 SUPERFAMILY SSF53822 24 323 9.42E-77 T 09-03-2017 IPR028082 Periplasmic binding protein-like I BV404_RS06685 24e427a75b8d3ec8e799eac5af4eb4a5 324 Pfam PF13407 Periplasmic binding protein domain 26 296 7.4E-58 T 09-03-2017 IPR025997 Periplasmic binding protein BV404_RS00535 97ff111b4b638482ca6135175ef66574 105 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 5.0E-48 T 09-03-2017 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 BV404_RS00535 97ff111b4b638482ca6135175ef66574 105 SUPERFAMILY SSF47598 3 103 4.0E-57 T 09-03-2017 IPR010985 Ribbon-helix-helix GO:0006355 BV404_RS00535 97ff111b4b638482ca6135175ef66574 105 Pfam PF01340 Met Apo-repressor, MetJ 3 99 9.5E-60 T 09-03-2017 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 BV404_RS00535 97ff111b4b638482ca6135175ef66574 105 Gene3D G3DSA:1.10.140.10 2 104 6.7E-63 T 09-03-2017 IPR023453 Methionine repressor MetJ domain BV404_RS00535 97ff111b4b638482ca6135175ef66574 105 Hamap MF_00744 Met repressor [metJ]. 1 105 35.001 T 09-03-2017 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 BV404_RS14180 92ef3979fcbf66b414fba0bb751b41a5 144 Gene3D G3DSA:3.40.50.360 2 143 1.4E-32 T 09-03-2017 IPR029039 Flavoprotein-like domain BV404_RS14180 92ef3979fcbf66b414fba0bb751b41a5 144 Pfam PF00258 Flavodoxin 4 136 3.6E-19 T 09-03-2017 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 BV404_RS14180 92ef3979fcbf66b414fba0bb751b41a5 144 SUPERFAMILY SSF52218 2 144 1.66E-36 T 09-03-2017 IPR029039 Flavoprotein-like domain BV404_RS01390 3d9068bae249d90fde7141cf5acce7b2 320 SUPERFAMILY SSF52283 4 139 4.16E-31 T 09-03-2017 BV404_RS01390 3d9068bae249d90fde7141cf5acce7b2 320 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 225 241 - T 09-03-2017 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site BV404_RS01390 3d9068bae249d90fde7141cf5acce7b2 320 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 34 319 1.7E-24 T 09-03-2017 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 BV404_RS01390 3d9068bae249d90fde7141cf5acce7b2 320 SUPERFAMILY SSF51735 103 290 1.73E-52 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS01390 3d9068bae249d90fde7141cf5acce7b2 320 Gene3D G3DSA:3.40.50.720 112 290 4.5E-60 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS01390 3d9068bae249d90fde7141cf5acce7b2 320 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 289 7.9E-54 T 09-03-2017 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 BV404_RS01390 3d9068bae249d90fde7141cf5acce7b2 320 Gene3D G3DSA:3.40.50.720 31 111 2.0E-28 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS18070 418e2f65b616ec15a7fd05954355c1b5 187 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 127 7.9E-38 T 09-03-2017 IPR020013 Fagellar hook-basal body protein, FlgE/F/G BV404_RS18070 418e2f65b616ec15a7fd05954355c1b5 187 SUPERFAMILY SSF117143 82 186 1.96E-25 T 09-03-2017 BV404_RS18070 418e2f65b616ec15a7fd05954355c1b5 187 Pfam PF00460 Flagella basal body rod protein 1 25 1.6E-9 T 09-03-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BV404_RS18070 418e2f65b616ec15a7fd05954355c1b5 187 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 1 186 3.4E-79 T 09-03-2017 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 BV404_RS18070 418e2f65b616ec15a7fd05954355c1b5 187 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 1 21 - T 09-03-2017 IPR019776 Flagellar basal body rod protein, conserved site BV404_RS12020 82b2ecb72009aa2f24cf802a13d14316 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 44 2.0E-10 T 09-03-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS12020 82b2ecb72009aa2f24cf802a13d14316 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 09-03-2017 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS12020 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.6E-16 T 09-03-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS12020 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.6E-16 T 09-03-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS12020 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.6E-16 T 09-03-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS12020 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.6E-16 T 09-03-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS12020 82b2ecb72009aa2f24cf802a13d14316 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.588 T 09-03-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS12020 82b2ecb72009aa2f24cf802a13d14316 71 Pfam PF01165 Ribosomal protein S21 4 56 3.6E-23 T 09-03-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS12020 82b2ecb72009aa2f24cf802a13d14316 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 7.2E-25 T 09-03-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS06970 c430bd272d8822b7b2edd9c82d007888 303 SUPERFAMILY SSF53067 1 300 7.21E-58 T 09-03-2017 BV404_RS06970 c430bd272d8822b7b2edd9c82d007888 303 Gene3D G3DSA:3.30.420.40 1 132 1.4E-38 T 09-03-2017 BV404_RS06970 c430bd272d8822b7b2edd9c82d007888 303 Hamap MF_01271 N-acetyl-D-glucosamine kinase [nagK]. 1 303 64.702 T 09-03-2017 IPR023505 N-acetyl-D-glucosamine kinase GO:0045127 KEGG: 00520+2.7.1.59|MetaCyc: PWY-6517|MetaCyc: PWY-6906 BV404_RS06970 c430bd272d8822b7b2edd9c82d007888 303 Gene3D G3DSA:3.30.420.40 133 281 1.1E-43 T 09-03-2017 BV404_RS06970 c430bd272d8822b7b2edd9c82d007888 303 ProSitePatterns PS01125 ROK family signature. 130 157 - T 09-03-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BV404_RS06970 c430bd272d8822b7b2edd9c82d007888 303 Pfam PF00480 ROK family 2 301 3.3E-74 T 09-03-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BV404_RS13560 5bbfe7fc6a1262ecb6b7e093ec533055 356 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 75 301 1.3E-55 T 09-03-2017 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 BV404_RS13560 5bbfe7fc6a1262ecb6b7e093ec533055 356 SUPERFAMILY SSF53756 9 345 7.06E-86 T 09-03-2017 BV404_RS13560 5bbfe7fc6a1262ecb6b7e093ec533055 356 Gene3D G3DSA:3.40.50.2000 169 345 1.3E-43 T 09-03-2017 BV404_RS13560 5bbfe7fc6a1262ecb6b7e093ec533055 356 Gene3D G3DSA:3.40.50.2000 13 154 1.6E-25 T 09-03-2017 BV404_RS13625 f06e86691718dab3c776e2507353d1ec 405 SUPERFAMILY SSF52507 1 182 3.92E-62 T 09-03-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 BV404_RS13625 f06e86691718dab3c776e2507353d1ec 405 Gene3D G3DSA:3.40.50.1950 2 186 1.0E-66 T 09-03-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 BV404_RS13625 f06e86691718dab3c776e2507353d1ec 405 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 186 370 2.2E-75 T 09-03-2017 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 BV404_RS13625 f06e86691718dab3c776e2507353d1ec 405 SUPERFAMILY SSF102645 184 403 3.4E-78 T 09-03-2017 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 BV404_RS13625 f06e86691718dab3c776e2507353d1ec 405 Gene3D G3DSA:3.40.50.10300 187 404 9.5E-87 T 09-03-2017 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 BV404_RS13625 f06e86691718dab3c776e2507353d1ec 405 Pfam PF02441 Flavoprotein 7 135 2.3E-32 T 09-03-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 BV404_RS13625 f06e86691718dab3c776e2507353d1ec 405 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 4 398 2.4E-147 T 09-03-2017 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5 BV404_RS12435 43a1fa44afe2f1c48ebd480e43e38b28 271 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 2 268 7.6E-116 T 09-03-2017 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 BV404_RS12435 43a1fa44afe2f1c48ebd480e43e38b28 271 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 269 48.063 T 09-03-2017 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 BV404_RS12435 43a1fa44afe2f1c48ebd480e43e38b28 271 Pfam PF00149 Calcineurin-like phosphoesterase 5 151 5.0E-13 T 09-03-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 BV404_RS12435 43a1fa44afe2f1c48ebd480e43e38b28 271 SUPERFAMILY SSF56300 4 252 2.37E-58 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like BV404_RS12435 43a1fa44afe2f1c48ebd480e43e38b28 271 Gene3D G3DSA:3.60.21.10 4 130 8.0E-57 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like BV404_RS12435 43a1fa44afe2f1c48ebd480e43e38b28 271 Gene3D G3DSA:3.60.21.10 167 265 8.0E-57 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like BV404_RS12435 43a1fa44afe2f1c48ebd480e43e38b28 271 PIRSF PIRSF000903 1 270 2.3E-117 T 09-03-2017 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 BV404_RS00965 dcca46bcb4b27aef41f0d4ca3b45d9aa 233 Pfam PF07650 KH domain 38 111 4.4E-19 T 09-03-2017 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS00965 dcca46bcb4b27aef41f0d4ca3b45d9aa 233 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 09-03-2017 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS00965 dcca46bcb4b27aef41f0d4ca3b45d9aa 233 SMART SM00322 60 125 1.8E-7 T 09-03-2017 IPR004087 K Homology domain GO:0003676 BV404_RS00965 dcca46bcb4b27aef41f0d4ca3b45d9aa 233 SUPERFAMILY SSF54821 108 206 8.76E-41 T 09-03-2017 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS00965 dcca46bcb4b27aef41f0d4ca3b45d9aa 233 Gene3D G3DSA:3.30.300.20 18 107 1.1E-32 T 09-03-2017 IPR015946 K homology domain-like, alpha/beta BV404_RS00965 dcca46bcb4b27aef41f0d4ca3b45d9aa 233 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 4.3E-42 T 09-03-2017 BV404_RS00965 dcca46bcb4b27aef41f0d4ca3b45d9aa 233 Gene3D G3DSA:3.30.1140.32 108 207 1.9E-47 T 09-03-2017 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS00965 dcca46bcb4b27aef41f0d4ca3b45d9aa 233 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 6.3E-99 T 09-03-2017 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 BV404_RS00965 dcca46bcb4b27aef41f0d4ca3b45d9aa 233 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.985 T 09-03-2017 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 BV404_RS00965 dcca46bcb4b27aef41f0d4ca3b45d9aa 233 SUPERFAMILY SSF54814 2 106 1.81E-36 T 09-03-2017 IPR009019 K homology domain, prokaryotic type GO:0003723 BV404_RS00710 fef8fef8eeec3d3e0f1230b1504b460d 378 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 106 143 - T 09-03-2017 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 BV404_RS00710 fef8fef8eeec3d3e0f1230b1504b460d 378 Gene3D G3DSA:3.40.630.10 319 377 1.9E-61 T 09-03-2017 BV404_RS00710 fef8fef8eeec3d3e0f1230b1504b460d 378 Gene3D G3DSA:3.40.630.10 4 185 1.9E-61 T 09-03-2017 BV404_RS00710 fef8fef8eeec3d3e0f1230b1504b460d 378 Hamap MF_01108 Acetylornithine deacetylase [argE]. 1 378 63.002 T 09-03-2017 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 BV404_RS00710 fef8fef8eeec3d3e0f1230b1504b460d 378 SUPERFAMILY SSF55031 177 292 6.73E-23 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain BV404_RS00710 fef8fef8eeec3d3e0f1230b1504b460d 378 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 71 80 - T 09-03-2017 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 BV404_RS00710 fef8fef8eeec3d3e0f1230b1504b460d 378 Gene3D G3DSA:3.30.70.360 186 287 2.9E-26 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain BV404_RS00710 fef8fef8eeec3d3e0f1230b1504b460d 378 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 8 372 4.1E-124 T 09-03-2017 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 BV404_RS00710 fef8fef8eeec3d3e0f1230b1504b460d 378 SUPERFAMILY SSF53187 3 176 1.83E-56 T 09-03-2017 BV404_RS00710 fef8fef8eeec3d3e0f1230b1504b460d 378 SUPERFAMILY SSF53187 301 377 1.83E-56 T 09-03-2017 BV404_RS00710 fef8fef8eeec3d3e0f1230b1504b460d 378 Pfam PF01546 Peptidase family M20/M25/M40 72 373 2.4E-31 T 09-03-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 BV404_RS00710 fef8fef8eeec3d3e0f1230b1504b460d 378 Pfam PF07687 Peptidase dimerisation domain 174 285 4.3E-26 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain BV404_RS08695 b80ae54b408230333970b561998a7f7b 416 Gene3D G3DSA:3.40.50.1970 1 179 1.3E-47 T 09-03-2017 BV404_RS08695 b80ae54b408230333970b561998a7f7b 416 Gene3D G3DSA:1.20.1090.10 188 381 1.1E-43 T 09-03-2017 BV404_RS08695 b80ae54b408230333970b561998a7f7b 416 SUPERFAMILY SSF56796 1 379 2.22E-89 T 09-03-2017 BV404_RS08695 b80ae54b408230333970b561998a7f7b 416 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 372 7.4E-92 T 09-03-2017 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 BV404_RS14900 ab792922df6dbaa10ea198692e03e801 153 SMART SM00360 65 137 1.2E-19 T 09-03-2017 IPR000504 RNA recognition motif domain GO:0003676 BV404_RS14900 ab792922df6dbaa10ea198692e03e801 153 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 66 135 9.7E-17 T 09-03-2017 IPR000504 RNA recognition motif domain GO:0003676 BV404_RS14900 ab792922df6dbaa10ea198692e03e801 153 Gene3D G3DSA:3.30.70.330 49 145 3.6E-26 T 09-03-2017 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 BV404_RS14900 ab792922df6dbaa10ea198692e03e801 153 SUPERFAMILY SSF54928 49 144 1.75E-25 T 09-03-2017 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 BV404_RS00065 ab792922df6dbaa10ea198692e03e801 153 SMART SM00360 65 137 1.2E-19 T 09-03-2017 IPR000504 RNA recognition motif domain GO:0003676 BV404_RS00065 ab792922df6dbaa10ea198692e03e801 153 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 66 135 9.7E-17 T 09-03-2017 IPR000504 RNA recognition motif domain GO:0003676 BV404_RS00065 ab792922df6dbaa10ea198692e03e801 153 Gene3D G3DSA:3.30.70.330 49 145 3.6E-26 T 09-03-2017 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 BV404_RS00065 ab792922df6dbaa10ea198692e03e801 153 SUPERFAMILY SSF54928 49 144 1.75E-25 T 09-03-2017 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 BV404_RS08980 cfa90d54c2711691822a38221facab6e 335 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 328 40.001 T 09-03-2017 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 BV404_RS08980 cfa90d54c2711691822a38221facab6e 335 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 18 322 8.2E-111 T 09-03-2017 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 BV404_RS08980 cfa90d54c2711691822a38221facab6e 335 Gene3D G3DSA:3.40.50.300 158 170 4.2E-5 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS08980 cfa90d54c2711691822a38221facab6e 335 Gene3D G3DSA:3.40.50.300 48 123 4.2E-5 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS08980 cfa90d54c2711691822a38221facab6e 335 SUPERFAMILY SSF52540 50 161 5.8E-11 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS08980 cfa90d54c2711691822a38221facab6e 335 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 23 325 1.5E-94 T 09-03-2017 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 BV404_RS13875 04ae9f8d93a7a6a511b94fb4d8002d4a 297 Gene3D G3DSA:3.40.190.10 199 262 6.3E-11 T 09-03-2017 BV404_RS13875 04ae9f8d93a7a6a511b94fb4d8002d4a 297 SUPERFAMILY SSF46785 1 86 1.36E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS13875 04ae9f8d93a7a6a511b94fb4d8002d4a 297 Gene3D G3DSA:1.10.10.10 1 81 8.7E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS13875 04ae9f8d93a7a6a511b94fb4d8002d4a 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.1E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS13875 04ae9f8d93a7a6a511b94fb4d8002d4a 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.1E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS13875 04ae9f8d93a7a6a511b94fb4d8002d4a 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.1E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS13875 04ae9f8d93a7a6a511b94fb4d8002d4a 297 Pfam PF03466 LysR substrate binding domain 87 289 2.3E-35 T 09-03-2017 IPR005119 LysR, substrate-binding BV404_RS13875 04ae9f8d93a7a6a511b94fb4d8002d4a 297 SUPERFAMILY SSF53850 88 291 1.41E-30 T 09-03-2017 BV404_RS13875 04ae9f8d93a7a6a511b94fb4d8002d4a 297 Gene3D G3DSA:3.40.190.10 82 198 4.5E-21 T 09-03-2017 BV404_RS13875 04ae9f8d93a7a6a511b94fb4d8002d4a 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 4.0E-17 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS09010 00c2da8b1c9b391aa90ed9cd2fce172e 402 Pfam PF02687 FtsX-like permease family 271 395 2.2E-17 T 09-03-2017 IPR003838 ABC transporter permease protein domain GO:0016020 BV404_RS09010 00c2da8b1c9b391aa90ed9cd2fce172e 402 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 402 5.1E-132 T 09-03-2017 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 BV404_RS09010 00c2da8b1c9b391aa90ed9cd2fce172e 402 Pfam PF12704 MacB-like periplasmic core domain 29 203 8.6E-15 T 09-03-2017 IPR025857 MacB-like periplasmic core domain BV404_RS00840 023f86409f031c9b81df840a753c1de9 485 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 3 484 5.9E-227 T 09-03-2017 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 BV404_RS00840 023f86409f031c9b81df840a753c1de9 485 Pfam PF00171 Aldehyde dehydrogenase family 9 453 5.0E-125 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 BV404_RS00840 023f86409f031c9b81df840a753c1de9 485 SUPERFAMILY SSF53720 3 449 4.06E-127 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 BV404_RS00840 023f86409f031c9b81df840a753c1de9 485 Gene3D G3DSA:3.40.309.10 257 442 1.3E-47 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 BV404_RS00840 023f86409f031c9b81df840a753c1de9 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 242 249 - T 09-03-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 BV404_RS00840 023f86409f031c9b81df840a753c1de9 485 Gene3D G3DSA:3.40.605.10 4 256 5.3E-77 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 BV404_RS00840 023f86409f031c9b81df840a753c1de9 485 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 09-03-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 BV404_RS00840 023f86409f031c9b81df840a753c1de9 485 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 1 485 56.152 T 09-03-2017 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 BV404_RS06925 6691ec7fbc2c130d7f15547f37c4b4c7 456 PIRSF PIRSF006603 5 454 1.2E-59 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BV404_RS06925 6691ec7fbc2c130d7f15547f37c4b4c7 456 Pfam PF01554 MatE 17 176 2.8E-34 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BV404_RS06925 6691ec7fbc2c130d7f15547f37c4b4c7 456 Pfam PF01554 MatE 243 404 2.8E-33 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BV404_RS06925 6691ec7fbc2c130d7f15547f37c4b4c7 456 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 421 5.0E-114 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BV404_RS02000 5551acbb14a6d4539a9e3dc42123a659 256 PIRSF PIRSF006648 3 252 1.1E-26 T 09-03-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 BV404_RS02000 5551acbb14a6d4539a9e3dc42123a659 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 3.4E-6 T 09-03-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 BV404_RS02000 5551acbb14a6d4539a9e3dc42123a659 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 3.4E-6 T 09-03-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 BV404_RS02000 5551acbb14a6d4539a9e3dc42123a659 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 3.4E-6 T 09-03-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 BV404_RS02000 5551acbb14a6d4539a9e3dc42123a659 256 Pfam PF01061 ABC-2 type transporter 8 218 1.5E-40 T 09-03-2017 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 BV404_RS05590 adaef8655ae205d5323ff7cff5abb1fb 425 Pfam PF01593 Flavin containing amine oxidoreductase 10 302 7.6E-24 T 09-03-2017 IPR002937 Amine oxidase GO:0016491|GO:0055114 BV404_RS05590 adaef8655ae205d5323ff7cff5abb1fb 425 Gene3D G3DSA:3.50.50.60 200 301 8.8E-31 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS05590 adaef8655ae205d5323ff7cff5abb1fb 425 Gene3D G3DSA:3.50.50.60 1 110 8.8E-31 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS05590 adaef8655ae205d5323ff7cff5abb1fb 425 SUPERFAMILY SSF51905 382 412 2.03E-50 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS05590 adaef8655ae205d5323ff7cff5abb1fb 425 SUPERFAMILY SSF51905 1 299 2.03E-50 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS04290 ed78cba5ffa751c6ff96260ab3037d42 255 Gene3D G3DSA:3.20.20.140 1 253 1.6E-87 T 09-03-2017 BV404_RS04290 ed78cba5ffa751c6ff96260ab3037d42 255 SUPERFAMILY SSF51556 1 253 1.58E-88 T 09-03-2017 IPR032466 Metal-dependent hydrolase BV404_RS04290 ed78cba5ffa751c6ff96260ab3037d42 255 PIRSF PIRSF005902 1 255 2.5E-81 T 09-03-2017 IPR001130 TatD family GO:0016788 BV404_RS04290 ed78cba5ffa751c6ff96260ab3037d42 255 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 253 2.3E-91 T 09-03-2017 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 BV404_RS04290 ed78cba5ffa751c6ff96260ab3037d42 255 Pfam PF01026 TatD related DNase 3 253 3.6E-77 T 09-03-2017 IPR001130 TatD family GO:0016788 BV404_RS04290 ed78cba5ffa751c6ff96260ab3037d42 255 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 09-03-2017 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 BV404_RS04290 ed78cba5ffa751c6ff96260ab3037d42 255 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 09-03-2017 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 BV404_RS09430 146e587d17e2b8cee2d312ef48f7e944 185 PIRSF PIRSF004982 3 185 2.1E-60 T 09-03-2017 IPR004658 Outer membrane lipoprotein Slp GO:0019867 BV404_RS09430 146e587d17e2b8cee2d312ef48f7e944 185 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 9 158 3.2E-33 T 09-03-2017 IPR004658 Outer membrane lipoprotein Slp GO:0019867 BV404_RS09430 146e587d17e2b8cee2d312ef48f7e944 185 Pfam PF03843 Outer membrane lipoprotein Slp family 18 162 1.9E-45 T 09-03-2017 IPR004658 Outer membrane lipoprotein Slp GO:0019867 BV404_RS06625 9404f7b76af7fa7d4b04a6d3ae795f8c 196 SUPERFAMILY SSF109604 5 185 6.91E-44 T 09-03-2017 BV404_RS06625 9404f7b76af7fa7d4b04a6d3ae795f8c 196 Pfam PF13023 HD domain 16 178 1.2E-53 T 09-03-2017 IPR006674 HD domain BV404_RS06625 9404f7b76af7fa7d4b04a6d3ae795f8c 196 Gene3D G3DSA:1.10.3210.10 2 187 1.0E-39 T 09-03-2017 IPR006674 HD domain BV404_RS05250 e32d5c49a1f5cf13e020eac546eb90f2 229 Gene3D G3DSA:3.40.50.2300 2 123 3.1E-32 T 09-03-2017 BV404_RS05250 e32d5c49a1f5cf13e020eac546eb90f2 229 Gene3D G3DSA:1.10.10.10 125 220 1.9E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS05250 e32d5c49a1f5cf13e020eac546eb90f2 229 SMART SM00448 2 113 2.0E-32 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS05250 e32d5c49a1f5cf13e020eac546eb90f2 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 218 8.8E-17 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BV404_RS05250 e32d5c49a1f5cf13e020eac546eb90f2 229 Pfam PF00072 Response regulator receiver domain 5 113 2.1E-24 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS05250 e32d5c49a1f5cf13e020eac546eb90f2 229 SMART SM00862 145 219 9.7E-15 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BV404_RS05250 e32d5c49a1f5cf13e020eac546eb90f2 229 SUPERFAMILY SSF46894 124 219 1.05E-20 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BV404_RS05250 e32d5c49a1f5cf13e020eac546eb90f2 229 SUPERFAMILY SSF52172 3 119 1.99E-34 T 09-03-2017 IPR011006 CheY-like superfamily BV404_RS01285 0cbf7ea738dd7720c020245e490d91c5 185 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 23 175 4.0E-62 T 09-03-2017 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 BV404_RS01285 0cbf7ea738dd7720c020245e490d91c5 185 SUPERFAMILY SSF56784 21 178 2.0E-39 T 09-03-2017 IPR023214 HAD-like domain BV404_RS01285 0cbf7ea738dd7720c020245e490d91c5 185 Pfam PF08282 haloacid dehalogenase-like hydrolase 92 157 1.3E-8 T 09-03-2017 IPR023214 HAD-like domain BV404_RS01285 0cbf7ea738dd7720c020245e490d91c5 185 PIRSF PIRSF006118 10 185 1.0E-73 T 09-03-2017 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 BV404_RS01285 0cbf7ea738dd7720c020245e490d91c5 185 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 24 137 2.6E-13 T 09-03-2017 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 BV404_RS01285 0cbf7ea738dd7720c020245e490d91c5 185 Gene3D G3DSA:3.40.50.1000 15 175 1.1E-44 T 09-03-2017 IPR023214 HAD-like domain BV404_RS02530 1dccbcfdca48a691a51701c61c1be614 648 SUPERFAMILY SSF48435 33 481 2.35E-123 T 09-03-2017 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 BV404_RS02530 1dccbcfdca48a691a51701c61c1be614 648 SUPERFAMILY SSF53955 483 643 1.9E-48 T 09-03-2017 IPR023346 Lysozyme-like domain BV404_RS02530 1dccbcfdca48a691a51701c61c1be614 648 Gene3D G3DSA:1.25.20.10 33 393 9.4E-107 T 09-03-2017 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 BV404_RS02530 1dccbcfdca48a691a51701c61c1be614 648 Pfam PF01464 Transglycosylase SLT domain 489 600 1.4E-29 T 09-03-2017 IPR008258 Transglycosylase SLT domain 1 BV404_RS02530 1dccbcfdca48a691a51701c61c1be614 648 Gene3D G3DSA:1.10.530.10 479 637 1.4E-49 T 09-03-2017 BV404_RS02530 1dccbcfdca48a691a51701c61c1be614 648 Pfam PF14718 Soluble lytic murein transglycosylase L domain 411 476 3.5E-21 T 09-03-2017 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 BV404_RS02530 1dccbcfdca48a691a51701c61c1be614 648 Gene3D G3DSA:1.10.1240.20 409 476 6.8E-25 T 09-03-2017 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 BV404_RS07385 4295c96f82d3525e268768a688d137c2 474 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 89 103 1.3E-27 T 09-03-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 BV404_RS07385 4295c96f82d3525e268768a688d137c2 474 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 121 131 1.3E-27 T 09-03-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 BV404_RS07385 4295c96f82d3525e268768a688d137c2 474 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 292 309 1.3E-27 T 09-03-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 BV404_RS07385 4295c96f82d3525e268768a688d137c2 474 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 188 200 1.3E-27 T 09-03-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 BV404_RS07385 4295c96f82d3525e268768a688d137c2 474 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 238 254 1.3E-27 T 09-03-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 BV404_RS07385 4295c96f82d3525e268768a688d137c2 474 Hamap MF_01579 Ribosomal RNA small subunit methyltransferase F [rsmF]. 5 474 64.693 T 09-03-2017 IPR023545 rRNA small subunit methyltransferase F GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 BV404_RS07385 4295c96f82d3525e268768a688d137c2 474 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 7 103 1.0E-29 T 09-03-2017 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-6790901 BV404_RS07385 4295c96f82d3525e268768a688d137c2 474 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 40 309 4.5E-101 T 09-03-2017 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-6790901 BV404_RS07385 4295c96f82d3525e268768a688d137c2 474 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 420 469 2.3E-10 T 09-03-2017 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 BV404_RS07385 4295c96f82d3525e268768a688d137c2 474 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 187 198 - T 09-03-2017 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 BV404_RS07385 4295c96f82d3525e268768a688d137c2 474 Pfam PF01189 16S rRNA methyltransferase RsmB/F 119 307 6.7E-49 T 09-03-2017 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 BV404_RS07385 4295c96f82d3525e268768a688d137c2 474 SUPERFAMILY SSF53335 5 309 9.09E-65 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS07385 4295c96f82d3525e268768a688d137c2 474 Gene3D G3DSA:3.40.50.150 100 309 2.6E-57 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS12890 3dd4cf51733658d35e138585ae6686eb 130 Gene3D G3DSA:3.40.1260.10 5 130 7.3E-29 T 09-03-2017 IPR027396 DsrEFH-like BV404_RS12890 3dd4cf51733658d35e138585ae6686eb 130 Pfam PF02635 DsrE/DsrF-like family 5 130 4.8E-27 T 09-03-2017 IPR003787 Sulphur relay, DsrE/F-like protein BV404_RS12890 3dd4cf51733658d35e138585ae6686eb 130 SUPERFAMILY SSF75169 5 130 3.34E-36 T 09-03-2017 IPR027396 DsrEFH-like BV404_RS12890 3dd4cf51733658d35e138585ae6686eb 130 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 4 130 1.3E-53 T 09-03-2017 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 BV404_RS00275 a16c0d54d13188320ca8f82f2ca3e6c1 182 SUPERFAMILY SSF55811 8 180 1.62E-40 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 BV404_RS00275 a16c0d54d13188320ca8f82f2ca3e6c1 182 PRINTS PR00502 NUDIX hydrolase family signature 75 89 3.8E-5 T 09-03-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 BV404_RS00275 a16c0d54d13188320ca8f82f2ca3e6c1 182 PRINTS PR00502 NUDIX hydrolase family signature 89 104 3.8E-5 T 09-03-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 BV404_RS00275 a16c0d54d13188320ca8f82f2ca3e6c1 182 Pfam PF00293 NUDIX domain 46 160 1.0E-16 T 09-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 BV404_RS00275 a16c0d54d13188320ca8f82f2ca3e6c1 182 Gene3D G3DSA:3.90.79.10 9 181 4.3E-45 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 BV404_RS00275 a16c0d54d13188320ca8f82f2ca3e6c1 182 ProSitePatterns PS00893 Nudix box signature. 80 101 - T 09-03-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 BV404_RS01200 91acd6ee48e5940341446475e165f590 456 Pfam PF08245 Mur ligase middle domain 108 291 1.3E-20 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 BV404_RS01200 91acd6ee48e5940341446475e165f590 456 Gene3D G3DSA:3.40.1190.10 92 312 1.4E-86 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 BV404_RS01200 91acd6ee48e5940341446475e165f590 456 SUPERFAMILY SSF53623 96 306 6.8E-51 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 BV404_RS01200 91acd6ee48e5940341446475e165f590 456 Gene3D G3DSA:3.40.50.720 1 90 3.4E-41 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS01200 91acd6ee48e5940341446475e165f590 456 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 1.8E-264 T 09-03-2017 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 BV404_RS01200 91acd6ee48e5940341446475e165f590 456 SUPERFAMILY SSF51984 1 89 5.76E-24 T 09-03-2017 BV404_RS01200 91acd6ee48e5940341446475e165f590 456 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 449 58.995 T 09-03-2017 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 BV404_RS01200 91acd6ee48e5940341446475e165f590 456 Gene3D G3DSA:3.90.190.20 313 449 7.7E-35 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BV404_RS01200 91acd6ee48e5940341446475e165f590 456 SUPERFAMILY SSF53244 311 448 3.01E-37 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BV404_RS01200 91acd6ee48e5940341446475e165f590 456 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 384 6.0E-11 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BV404_RS01200 91acd6ee48e5940341446475e165f590 456 Pfam PF01225 Mur ligase family, catalytic domain 2 101 1.8E-20 T 09-03-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 BV404_RS07490 abd7c9b0cf42e652edc06612c84d5632 190 SUPERFAMILY SSF48695 37 189 6.99E-33 T 09-03-2017 IPR011031 Multihaem cytochrome BV404_RS07490 abd7c9b0cf42e652edc06612c84d5632 190 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 24 187 2.7E-53 T 09-03-2017 IPR005126 NapC/NirT cytochrome c, N-terminal BV404_RS07490 abd7c9b0cf42e652edc06612c84d5632 190 PIRSF PIRSF000013 3 189 1.2E-61 T 09-03-2017 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 BV404_RS07490 abd7c9b0cf42e652edc06612c84d5632 190 Gene3D G3DSA:1.10.3820.10 23 186 1.1E-22 T 09-03-2017 BV404_RS10005 60e1a256f458fa07ae061a733d8dd55f 134 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 127 2.7E-58 T 09-03-2017 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 BV404_RS10005 60e1a256f458fa07ae061a733d8dd55f 134 Pfam PF13411 MerR HTH family regulatory protein 1 67 2.1E-18 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BV404_RS10005 60e1a256f458fa07ae061a733d8dd55f 134 Gene3D G3DSA:1.10.1660.10 1 55 8.0E-24 T 09-03-2017 BV404_RS10005 60e1a256f458fa07ae061a733d8dd55f 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.8E-6 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BV404_RS10005 60e1a256f458fa07ae061a733d8dd55f 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.8E-6 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BV404_RS10005 60e1a256f458fa07ae061a733d8dd55f 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.8E-6 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BV404_RS10005 60e1a256f458fa07ae061a733d8dd55f 134 SMART SM00422 1 70 5.0E-27 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BV404_RS10005 60e1a256f458fa07ae061a733d8dd55f 134 Gene3D G3DSA:1.10.1660.10 56 131 5.5E-25 T 09-03-2017 BV404_RS10005 60e1a256f458fa07ae061a733d8dd55f 134 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BV404_RS10005 60e1a256f458fa07ae061a733d8dd55f 134 SUPERFAMILY SSF46955 1 126 1.03E-35 T 09-03-2017 IPR009061 Putative DNA-binding domain BV404_RS01480 207ea49cdec032ae4691edbc511d4a30 517 Gene3D G3DSA:3.30.450.20 142 280 1.4E-17 T 09-03-2017 BV404_RS01480 207ea49cdec032ae4691edbc511d4a30 517 Pfam PF02743 Cache domain 49 264 5.2E-25 T 09-03-2017 IPR033479 Double Cache domain 1 BV404_RS01480 207ea49cdec032ae4691edbc511d4a30 517 Gene3D G3DSA:3.30.70.270 365 516 1.3E-46 T 09-03-2017 BV404_RS01480 207ea49cdec032ae4691edbc511d4a30 517 Pfam PF00990 Diguanylate cyclase, GGDEF domain 364 513 1.2E-43 T 09-03-2017 IPR000160 GGDEF domain BV404_RS01480 207ea49cdec032ae4691edbc511d4a30 517 SUPERFAMILY SSF103190 183 263 3.53E-13 T 09-03-2017 IPR029151 Periplasmic sensor domain-like BV404_RS01480 207ea49cdec032ae4691edbc511d4a30 517 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 361 516 5.0E-48 T 09-03-2017 IPR000160 GGDEF domain BV404_RS01480 207ea49cdec032ae4691edbc511d4a30 517 SUPERFAMILY SSF55073 368 515 1.02E-43 T 09-03-2017 IPR029787 Nucleotide cyclase BV404_RS01480 207ea49cdec032ae4691edbc511d4a30 517 SMART SM00267 352 517 1.1E-54 T 09-03-2017 IPR000160 GGDEF domain BV404_RS14150 416c62e0a080fb466eab0279b9106357 245 Gene3D G3DSA:3.40.50.300 1 240 4.2E-80 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS14150 416c62e0a080fb466eab0279b9106357 245 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS14150 416c62e0a080fb466eab0279b9106357 245 Pfam PF00005 ABC transporter 17 168 9.0E-32 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS14150 416c62e0a080fb466eab0279b9106357 245 SUPERFAMILY SSF52540 1 238 1.46E-75 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS14150 416c62e0a080fb466eab0279b9106357 245 PIRSF PIRSF039085 1 244 1.1E-104 T 09-03-2017 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 BV404_RS14150 416c62e0a080fb466eab0279b9106357 245 SMART SM00382 26 216 1.9E-13 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS09735 50ebf06c1750256384912e835763964a 385 Pfam PF01344 Kelch motif 81 130 1.0E-9 T 09-03-2017 IPR006652 Kelch repeat type 1 GO:0005515 BV404_RS09735 50ebf06c1750256384912e835763964a 385 TIGRFAM TIGR03547 muta_rot_YjhT: mutatrotase, YjhT family 29 377 3.0E-134 T 09-03-2017 IPR019936 Mutatrotase, YjhT-like BV404_RS09735 50ebf06c1750256384912e835763964a 385 SUPERFAMILY SSF117281 203 374 2.09E-27 T 09-03-2017 BV404_RS09735 50ebf06c1750256384912e835763964a 385 SUPERFAMILY SSF117281 46 169 2.09E-27 T 09-03-2017 BV404_RS09735 50ebf06c1750256384912e835763964a 385 Gene3D G3DSA:2.120.10.80 56 169 1.3E-26 T 09-03-2017 IPR015915 Kelch-type beta propeller GO:0005515 BV404_RS09735 50ebf06c1750256384912e835763964a 385 Gene3D G3DSA:2.120.10.80 203 374 1.3E-26 T 09-03-2017 IPR015915 Kelch-type beta propeller GO:0005515 BV404_RS01965 6697fc023bad2f726cd24bfafffbcefb 886 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 360 428 2.5E-5 T 09-03-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BV404_RS01965 6697fc023bad2f726cd24bfafffbcefb 886 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 104 298 4.8E-10 T 09-03-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BV404_RS01965 6697fc023bad2f726cd24bfafffbcefb 886 Gene3D G3DSA:3.40.50.970 473 704 2.2E-120 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold BV404_RS01965 6697fc023bad2f726cd24bfafffbcefb 886 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 4 885 0.0 T 09-03-2017 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 BV404_RS01965 6697fc023bad2f726cd24bfafffbcefb 886 PIRSF PIRSF000156 1 886 0.0 T 09-03-2017 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 BV404_RS01965 6697fc023bad2f726cd24bfafffbcefb 886 SUPERFAMILY SSF52518 56 469 1.05E-139 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold BV404_RS01965 6697fc023bad2f726cd24bfafffbcefb 886 Gene3D G3DSA:3.40.50.920 706 885 2.0E-74 T 09-03-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 BV404_RS01965 6697fc023bad2f726cd24bfafffbcefb 886 SUPERFAMILY SSF52922 701 885 1.38E-58 T 09-03-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 BV404_RS01965 6697fc023bad2f726cd24bfafffbcefb 886 SUPERFAMILY SSF52518 475 700 1.77E-97 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold BV404_RS01965 6697fc023bad2f726cd24bfafffbcefb 886 Gene3D G3DSA:3.40.50.970 55 469 7.3E-154 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold BV404_RS07835 f0cefb2024a5fbdcc6f3d684c81bbd06 540 SUPERFAMILY SSF55890 323 410 1.31E-9 T 09-03-2017 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 BV404_RS07835 f0cefb2024a5fbdcc6f3d684c81bbd06 540 SUPERFAMILY SSF103190 39 170 1.96E-36 T 09-03-2017 IPR029151 Periplasmic sensor domain-like BV404_RS07835 f0cefb2024a5fbdcc6f3d684c81bbd06 540 Gene3D G3DSA:3.30.450.20 32 172 2.7E-46 T 09-03-2017 BV404_RS07835 f0cefb2024a5fbdcc6f3d684c81bbd06 540 SUPERFAMILY SSF55785 218 307 5.58E-11 T 09-03-2017 IPR000014 PAS domain BV404_RS07835 f0cefb2024a5fbdcc6f3d684c81bbd06 540 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 321 372 3.4E-9 T 09-03-2017 BV404_RS07835 f0cefb2024a5fbdcc6f3d684c81bbd06 540 Pfam PF17203 Single cache domain 3 38 169 1.5E-19 T 09-03-2017 IPR033463 Single cache domain 3 BV404_RS07835 f0cefb2024a5fbdcc6f3d684c81bbd06 540 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 535 1.4E-7 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS07835 f0cefb2024a5fbdcc6f3d684c81bbd06 540 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 481 1.4E-7 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS07835 f0cefb2024a5fbdcc6f3d684c81bbd06 540 PRINTS PR00344 Bacterial sensor protein C-terminal signature 498 516 1.4E-7 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS07835 f0cefb2024a5fbdcc6f3d684c81bbd06 540 Gene3D G3DSA:3.30.565.10 389 537 1.2E-21 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS07835 f0cefb2024a5fbdcc6f3d684c81bbd06 540 Gene3D G3DSA:3.30.450.20 220 310 7.8E-8 T 09-03-2017 BV404_RS07835 f0cefb2024a5fbdcc6f3d684c81bbd06 540 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 423 537 1.6E-13 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS07835 f0cefb2024a5fbdcc6f3d684c81bbd06 540 SMART SM00387 419 538 1.2E-13 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS07835 f0cefb2024a5fbdcc6f3d684c81bbd06 540 SUPERFAMILY SSF55874 408 535 5.89E-21 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS07835 f0cefb2024a5fbdcc6f3d684c81bbd06 540 Pfam PF00989 PAS fold 217 271 6.6E-6 T 09-03-2017 IPR013767 PAS fold GO:0006355 BV404_RS07835 f0cefb2024a5fbdcc6f3d684c81bbd06 540 Gene3D G3DSA:1.10.287.130 311 378 2.8E-21 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS13415 60a622e7cacd455d231ae01713bf7ad8 131 Pfam PF04138 GtrA-like protein 7 128 4.5E-11 T 09-03-2017 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 BV404_RS00660 61c9ddd38c09487f5709db388912d509 127 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 7 127 1.0E-50 T 09-03-2017 IPR003510 Fumarate reductase, subunit C GO:0016020 BV404_RS00660 61c9ddd38c09487f5709db388912d509 127 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 1 127 26.679 T 09-03-2017 IPR003510 Fumarate reductase, subunit C GO:0016020 BV404_RS00660 61c9ddd38c09487f5709db388912d509 127 Pfam PF02300 Fumarate reductase subunit C 2 127 3.5E-48 T 09-03-2017 IPR003510 Fumarate reductase, subunit C GO:0016020 BV404_RS00660 61c9ddd38c09487f5709db388912d509 127 SUPERFAMILY SSF81343 1 127 5.45E-51 T 09-03-2017 BV404_RS00660 61c9ddd38c09487f5709db388912d509 127 PIRSF PIRSF000180 1 127 4.0E-54 T 09-03-2017 IPR003510 Fumarate reductase, subunit C GO:0016020 BV404_RS00660 61c9ddd38c09487f5709db388912d509 127 Gene3D G3DSA:1.20.1300.10 1 127 4.3E-52 T 09-03-2017 BV404_RS10455 c426c4ae8fe58a04c783c48a9d543cb7 146 SMART SM00226 3 145 3.2E-46 T 09-03-2017 IPR023485 Phosphotyrosine protein phosphatase I superfamily BV404_RS10455 c426c4ae8fe58a04c783c48a9d543cb7 146 SUPERFAMILY SSF52788 3 146 5.76E-39 T 09-03-2017 IPR023485 Phosphotyrosine protein phosphatase I superfamily BV404_RS10455 c426c4ae8fe58a04c783c48a9d543cb7 146 Gene3D G3DSA:3.40.50.270 3 146 7.0E-41 T 09-03-2017 BV404_RS10455 c426c4ae8fe58a04c783c48a9d543cb7 146 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 143 2.0E-35 T 09-03-2017 IPR023485 Phosphotyrosine protein phosphatase I superfamily BV404_RS10455 c426c4ae8fe58a04c783c48a9d543cb7 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 101 114 6.3E-26 T 09-03-2017 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 BV404_RS10455 c426c4ae8fe58a04c783c48a9d543cb7 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 117 132 6.3E-26 T 09-03-2017 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 BV404_RS10455 c426c4ae8fe58a04c783c48a9d543cb7 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 79 94 6.3E-26 T 09-03-2017 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 BV404_RS10455 c426c4ae8fe58a04c783c48a9d543cb7 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 5 22 6.3E-26 T 09-03-2017 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 BV404_RS10455 c426c4ae8fe58a04c783c48a9d543cb7 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 45 61 6.3E-26 T 09-03-2017 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 BV404_RS09765 bf42fe4765a766831cc30df1bc7e0c98 236 Gene3D G3DSA:3.20.20.70 4 227 4.9E-81 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS09765 bf42fe4765a766831cc30df1bc7e0c98 236 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 13 227 34.741 T 09-03-2017 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 BV404_RS09765 bf42fe4765a766831cc30df1bc7e0c98 236 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 37 227 2.4E-82 T 09-03-2017 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 BV404_RS09765 bf42fe4765a766831cc30df1bc7e0c98 236 SUPERFAMILY SSF51366 15 225 1.29E-47 T 09-03-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 BV404_RS09355 43dcdc3a479821d1b5431d0419a6c30e 698 Gene3D G3DSA:1.10.3720.10 436 685 2.2E-43 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS09355 43dcdc3a479821d1b5431d0419a6c30e 698 Gene3D G3DSA:1.10.3720.10 151 407 1.5E-41 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS09355 43dcdc3a479821d1b5431d0419a6c30e 698 SUPERFAMILY SSF161098 439 679 8.04E-45 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS09355 43dcdc3a479821d1b5431d0419a6c30e 698 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 505 682 1.8E-13 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS09355 43dcdc3a479821d1b5431d0419a6c30e 698 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 213 404 9.2E-15 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS09355 43dcdc3a479821d1b5431d0419a6c30e 698 SUPERFAMILY SSF161098 150 410 2.09E-41 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS05435 d9fdd478df9d0126db128ba3d9eb91ef 713 Gene3D G3DSA:3.40.50.10750 523 681 2.4E-68 T 09-03-2017 BV404_RS05435 d9fdd478df9d0126db128ba3d9eb91ef 713 Pfam PF01515 Phosphate acetyl/butaryl transferase 390 705 6.6E-125 T 09-03-2017 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 BV404_RS05435 d9fdd478df9d0126db128ba3d9eb91ef 713 PIRSF PIRSF006107 1 713 0.0 T 09-03-2017 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 BV404_RS05435 d9fdd478df9d0126db128ba3d9eb91ef 713 Pfam PF13500 AAA domain 3 228 2.8E-48 T 09-03-2017 BV404_RS05435 d9fdd478df9d0126db128ba3d9eb91ef 713 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 405 705 1.5E-132 T 09-03-2017 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 BV404_RS05435 d9fdd478df9d0126db128ba3d9eb91ef 713 Gene3D G3DSA:3.40.1390.20 224 364 4.9E-30 T 09-03-2017 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like BV404_RS05435 d9fdd478df9d0126db128ba3d9eb91ef 713 SUPERFAMILY SSF75138 228 352 1.03E-24 T 09-03-2017 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like BV404_RS05435 d9fdd478df9d0126db128ba3d9eb91ef 713 SUPERFAMILY SSF53659 391 708 2.47E-96 T 09-03-2017 BV404_RS05435 d9fdd478df9d0126db128ba3d9eb91ef 713 SUPERFAMILY SSF52540 1 239 9.11E-28 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS05435 d9fdd478df9d0126db128ba3d9eb91ef 713 Pfam PF07085 DRTGG domain 232 343 2.8E-28 T 09-03-2017 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 BV404_RS05435 d9fdd478df9d0126db128ba3d9eb91ef 713 Gene3D G3DSA:3.40.50.300 2 221 2.3E-8 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS07745 d02ee89f1fc439044a4b050902d69748 438 Gene3D G3DSA:3.30.450.20 154 254 1.1E-18 T 09-03-2017 BV404_RS07745 d02ee89f1fc439044a4b050902d69748 438 Gene3D G3DSA:3.30.450.20 35 131 7.3E-14 T 09-03-2017 BV404_RS07745 d02ee89f1fc439044a4b050902d69748 438 SUPERFAMILY SSF55785 34 134 8.72E-12 T 09-03-2017 IPR000014 PAS domain BV404_RS07745 d02ee89f1fc439044a4b050902d69748 438 SUPERFAMILY SSF58104 249 435 7.06E-52 T 09-03-2017 BV404_RS07745 d02ee89f1fc439044a4b050902d69748 438 SMART SM00086 217 259 0.022 T 09-03-2017 IPR001610 PAC motif BV404_RS07745 d02ee89f1fc439044a4b050902d69748 438 SMART SM00086 94 136 340.0 T 09-03-2017 IPR001610 PAC motif BV404_RS07745 d02ee89f1fc439044a4b050902d69748 438 Pfam PF08447 PAS fold 165 252 4.0E-13 T 09-03-2017 IPR013655 PAS fold-3 GO:0005515 BV404_RS07745 d02ee89f1fc439044a4b050902d69748 438 SUPERFAMILY SSF55785 155 258 1.26E-19 T 09-03-2017 IPR000014 PAS domain BV404_RS07745 d02ee89f1fc439044a4b050902d69748 438 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 35 141 1.3E-8 T 09-03-2017 IPR000014 PAS domain BV404_RS07745 d02ee89f1fc439044a4b050902d69748 438 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 141 263 9.2E-12 T 09-03-2017 IPR000014 PAS domain BV404_RS07745 d02ee89f1fc439044a4b050902d69748 438 SMART SM00283 248 435 9.0E-20 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 BV404_RS07745 d02ee89f1fc439044a4b050902d69748 438 Gene3D G3DSA:1.10.287.950 255 435 1.4E-46 T 09-03-2017 BV404_RS07745 d02ee89f1fc439044a4b050902d69748 438 SMART SM00091 19 89 4.8 T 09-03-2017 IPR000014 PAS domain BV404_RS07745 d02ee89f1fc439044a4b050902d69748 438 SMART SM00091 141 212 7.8 T 09-03-2017 IPR000014 PAS domain BV404_RS07745 d02ee89f1fc439044a4b050902d69748 438 Pfam PF13426 PAS domain 37 127 5.9E-9 T 09-03-2017 IPR000014 PAS domain BV404_RS07745 d02ee89f1fc439044a4b050902d69748 438 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 288 434 1.0E-39 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 BV404_RS11410 1426bac7a294e233d291ddef4f96e702 421 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 418 4.7E-149 T 09-03-2017 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 BV404_RS11410 1426bac7a294e233d291ddef4f96e702 421 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 197 418 9.0E-72 T 09-03-2017 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 BV404_RS11410 1426bac7a294e233d291ddef4f96e702 421 Pfam PF07670 Nucleoside recognition 95 191 1.4E-7 T 09-03-2017 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 BV404_RS11410 1426bac7a294e233d291ddef4f96e702 421 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 5.0E-25 T 09-03-2017 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 BV404_RS00885 6405b3145aa539e82ca72963ae5407b7 600 Gene3D G3DSA:3.40.50.720 398 531 2.5E-36 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS00885 6405b3145aa539e82ca72963ae5407b7 600 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 16 283 3.1E-81 T 09-03-2017 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 BV404_RS00885 6405b3145aa539e82ca72963ae5407b7 600 Hamap MF_01412 Glutathione-regulated potassium-efflux system protein KefB [kefB]. 4 599 48.022 T 09-03-2017 IPR020884 Glutathione-regulated potassium-efflux system protein KefB GO:0005886|GO:0006813|GO:0015503 BV404_RS00885 6405b3145aa539e82ca72963ae5407b7 600 Pfam PF00999 Sodium/hydrogen exchanger family 13 371 1.3E-64 T 09-03-2017 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 BV404_RS00885 6405b3145aa539e82ca72963ae5407b7 600 PRINTS PR00335 TrkA potassium uptake protein signature 459 469 7.0E-8 T 09-03-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 BV404_RS00885 6405b3145aa539e82ca72963ae5407b7 600 PRINTS PR00335 TrkA potassium uptake protein signature 402 416 7.0E-8 T 09-03-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 BV404_RS00885 6405b3145aa539e82ca72963ae5407b7 600 PRINTS PR00335 TrkA potassium uptake protein signature 448 458 7.0E-8 T 09-03-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 BV404_RS00885 6405b3145aa539e82ca72963ae5407b7 600 PRINTS PR00335 TrkA potassium uptake protein signature 419 433 7.0E-8 T 09-03-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 BV404_RS00885 6405b3145aa539e82ca72963ae5407b7 600 Pfam PF02254 TrkA-N domain 403 513 4.9E-23 T 09-03-2017 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 BV404_RS00885 6405b3145aa539e82ca72963ae5407b7 600 SUPERFAMILY SSF51735 402 530 1.1E-29 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS06800 4e0c37020b11029829cd54871e46be58 378 SUPERFAMILY SSF51182 57 377 4.56E-90 T 09-03-2017 IPR011051 RmlC-like cupin domain BV404_RS06800 4e0c37020b11029829cd54871e46be58 378 Gene3D G3DSA:2.60.120.10 65 167 2.9E-22 T 09-03-2017 IPR014710 RmlC-like jelly roll fold BV404_RS06800 4e0c37020b11029829cd54871e46be58 378 Gene3D G3DSA:2.60.120.10 216 352 1.9E-29 T 09-03-2017 IPR014710 RmlC-like jelly roll fold BV404_RS06800 4e0c37020b11029829cd54871e46be58 378 Pfam PF04209 homogentisate 1,2-dioxygenase 85 377 1.8E-23 T 09-03-2017 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 BV404_RS02895 65055969994d2cd370ac69f340894e5d 280 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 279 2.7E-105 T 09-03-2017 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BV404_RS02895 65055969994d2cd370ac69f340894e5d 280 SUPERFAMILY SSF46934 3 53 1.84E-18 T 09-03-2017 IPR009060 UBA-like GO:0005515 BV404_RS02895 65055969994d2cd370ac69f340894e5d 280 Gene3D G3DSA:1.10.8.10 1 54 1.0E-27 T 09-03-2017 BV404_RS02895 65055969994d2cd370ac69f340894e5d 280 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 09-03-2017 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BV404_RS02895 65055969994d2cd370ac69f340894e5d 280 Hamap MF_00050 Elongation factor Ts [tsf]. 1 279 77.559 T 09-03-2017 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BV404_RS02895 65055969994d2cd370ac69f340894e5d 280 Gene3D G3DSA:1.10.286.20 180 224 2.1E-21 T 09-03-2017 BV404_RS02895 65055969994d2cd370ac69f340894e5d 280 Gene3D G3DSA:3.30.479.20 56 92 2.5E-27 T 09-03-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BV404_RS02895 65055969994d2cd370ac69f340894e5d 280 Gene3D G3DSA:3.30.479.20 164 179 2.5E-27 T 09-03-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BV404_RS02895 65055969994d2cd370ac69f340894e5d 280 Gene3D G3DSA:3.30.479.20 225 263 2.5E-27 T 09-03-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BV404_RS02895 65055969994d2cd370ac69f340894e5d 280 SUPERFAMILY SSF54713 55 137 2.78E-19 T 09-03-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BV404_RS02895 65055969994d2cd370ac69f340894e5d 280 Pfam PF00889 Elongation factor TS 70 260 1.3E-62 T 09-03-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BV404_RS02895 65055969994d2cd370ac69f340894e5d 280 SUPERFAMILY SSF54713 141 277 3.66E-46 T 09-03-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BV404_RS02895 65055969994d2cd370ac69f340894e5d 280 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 09-03-2017 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BV404_RS09460 c23e37a90c86983ac0d0e6f99983a3cf 667 Gene3D G3DSA:3.20.20.70 1 358 9.5E-119 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS09460 c23e37a90c86983ac0d0e6f99983a3cf 667 PRINTS PR00419 Adrenodoxin reductase family signature 375 397 8.6E-10 T 09-03-2017 BV404_RS09460 c23e37a90c86983ac0d0e6f99983a3cf 667 PRINTS PR00419 Adrenodoxin reductase family signature 398 411 8.6E-10 T 09-03-2017 BV404_RS09460 c23e37a90c86983ac0d0e6f99983a3cf 667 SUPERFAMILY SSF51971 332 515 2.0E-41 T 09-03-2017 BV404_RS09460 c23e37a90c86983ac0d0e6f99983a3cf 667 SUPERFAMILY SSF51395 2 361 2.88E-106 T 09-03-2017 BV404_RS09460 c23e37a90c86983ac0d0e6f99983a3cf 667 SUPERFAMILY SSF51905 373 429 1.73E-18 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS09460 c23e37a90c86983ac0d0e6f99983a3cf 667 SUPERFAMILY SSF51905 520 664 1.73E-18 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS09460 c23e37a90c86983ac0d0e6f99983a3cf 667 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 328 1.0E-82 T 09-03-2017 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 BV404_RS09460 c23e37a90c86983ac0d0e6f99983a3cf 667 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 374 636 2.6E-25 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS09460 c23e37a90c86983ac0d0e6f99983a3cf 667 Gene3D G3DSA:3.50.50.60 359 450 1.7E-27 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS09460 c23e37a90c86983ac0d0e6f99983a3cf 667 Gene3D G3DSA:3.50.50.60 469 620 5.9E-42 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS11070 eb06f1a573a07ca1b529035c8bcc5aa3 504 Gene3D G3DSA:3.30.420.40 12 133 7.6E-44 T 09-03-2017 BV404_RS11070 eb06f1a573a07ca1b529035c8bcc5aa3 504 SUPERFAMILY SSF53067 140 311 4.75E-47 T 09-03-2017 BV404_RS11070 eb06f1a573a07ca1b529035c8bcc5aa3 504 Pfam PF02541 Ppx/GppA phosphatase family 28 310 1.4E-85 T 09-03-2017 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 BV404_RS11070 eb06f1a573a07ca1b529035c8bcc5aa3 504 SUPERFAMILY SSF53067 15 135 2.16E-36 T 09-03-2017 BV404_RS11070 eb06f1a573a07ca1b529035c8bcc5aa3 504 SUPERFAMILY SSF109604 315 503 6.28E-47 T 09-03-2017 BV404_RS11070 eb06f1a573a07ca1b529035c8bcc5aa3 504 PIRSF PIRSF001267 5 504 2.3E-202 T 09-03-2017 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 BV404_RS11070 eb06f1a573a07ca1b529035c8bcc5aa3 504 Gene3D G3DSA:3.30.420.150 134 311 1.1E-54 T 09-03-2017 BV404_RS11070 eb06f1a573a07ca1b529035c8bcc5aa3 504 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 14 308 1.9E-104 T 09-03-2017 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 BV404_RS00860 0924120ae5f47b81d03b23369260b362 69 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 65 8.4E-33 T 09-03-2017 IPR010648 Uncharacterised protein family UPF0270 BV404_RS00860 0924120ae5f47b81d03b23369260b362 69 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 64 1.0E-23 T 09-03-2017 IPR010648 Uncharacterised protein family UPF0270 BV404_RS00860 0924120ae5f47b81d03b23369260b362 69 Gene3D G3DSA:1.10.10.610 1 66 5.0E-34 T 09-03-2017 IPR010648 Uncharacterised protein family UPF0270 BV404_RS00860 0924120ae5f47b81d03b23369260b362 69 PIRSF PIRSF006169 1 69 9.0E-33 T 09-03-2017 IPR010648 Uncharacterised protein family UPF0270 BV404_RS00860 0924120ae5f47b81d03b23369260b362 69 SUPERFAMILY SSF118001 1 67 7.98E-27 T 09-03-2017 IPR010648 Uncharacterised protein family UPF0270 BV404_RS13650 6f0735e3ddf22c5cb1fd7b82427c1443 288 Pfam PF08340 Domain of unknown function (DUF1732) 204 288 6.4E-35 T 09-03-2017 IPR013551 Domain of unknown function DUF1732 BV404_RS13650 6f0735e3ddf22c5cb1fd7b82427c1443 288 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 288 2.0E-119 T 09-03-2017 IPR005229 Conserved hypothetical protein CHP00255 BV404_RS13650 6f0735e3ddf22c5cb1fd7b82427c1443 288 Pfam PF03755 YicC-like family, N-terminal region 2 154 2.0E-43 T 09-03-2017 IPR013527 YicC-like, N-terminal BV404_RS09390 ca91c446b65e482950f38b1fddd1cc51 92 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 69 2.0E-29 T 09-03-2017 IPR027354 YcgL domain BV404_RS09390 ca91c446b65e482950f38b1fddd1cc51 92 Pfam PF05166 YcgL domain 3 74 6.1E-33 T 09-03-2017 IPR027354 YcgL domain BV404_RS09390 ca91c446b65e482950f38b1fddd1cc51 92 Hamap MF_01866 Protein YcgL [ycgL]. 1 87 27.854 T 09-03-2017 IPR027354 YcgL domain BV404_RS09390 ca91c446b65e482950f38b1fddd1cc51 92 SUPERFAMILY SSF160191 1 90 1.11E-37 T 09-03-2017 BV404_RS11990 bec4c7c580ad662263f0dd48d57600b6 267 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 264 17.356 T 09-03-2017 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 BV404_RS11990 bec4c7c580ad662263f0dd48d57600b6 267 Pfam PF02673 Bacitracin resistance protein BacA 7 258 1.7E-73 T 09-03-2017 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 BV404_RS11990 bec4c7c580ad662263f0dd48d57600b6 267 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 7 257 2.0E-72 T 09-03-2017 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 BV404_RS09755 83beca0f8eba5c17f5b36bb41502d4d5 169 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 22 150 1.8E-26 T 09-03-2017 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component BV404_RS11690 56acca89a1532883f52aa9392792dc54 584 SUPERFAMILY SSF56601 198 577 2.22E-89 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like BV404_RS11690 56acca89a1532883f52aa9392792dc54 584 Pfam PF03717 Penicillin-binding Protein dimerisation domain 79 232 1.0E-17 T 09-03-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 BV404_RS11690 56acca89a1532883f52aa9392792dc54 584 Gene3D G3DSA:3.40.710.10 253 573 2.6E-86 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like BV404_RS11690 56acca89a1532883f52aa9392792dc54 584 Gene3D G3DSA:3.90.1310.10 153 252 2.0E-31 T 09-03-2017 BV404_RS11690 56acca89a1532883f52aa9392792dc54 584 Pfam PF00905 Penicillin binding protein transpeptidase domain 272 567 1.6E-73 T 09-03-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 BV404_RS11690 56acca89a1532883f52aa9392792dc54 584 SUPERFAMILY SSF56519 74 245 1.83E-43 T 09-03-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 BV404_RS07270 605bacf0b29dda3cd0eb54a9774c601e 105 Pfam PF12321 Protein of unknown function (DUF3634) 2 103 7.2E-41 T 09-03-2017 IPR022090 Protein of unknown function DUF3634 BV404_RS13355 1a85d59f77da23192d2de767028ae345 413 SUPERFAMILY SSF50182 187 252 3.92E-11 T 09-03-2017 IPR010920 LSM domain BV404_RS13355 1a85d59f77da23192d2de767028ae345 413 Gene3D G3DSA:2.30.30.60 203 252 1.9E-8 T 09-03-2017 BV404_RS13355 1a85d59f77da23192d2de767028ae345 413 Pfam PF00924 Mechanosensitive ion channel 144 397 2.7E-48 T 09-03-2017 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 BV404_RS12840 49d389c9a3560c5f0f833c508b4097d6 96 Hamap MF_00720 Primosomal replication protein n [priB]. 1 96 24.317 T 09-03-2017 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 BV404_RS12840 49d389c9a3560c5f0f833c508b4097d6 96 PIRSF PIRSF003135 1 96 3.5E-42 T 09-03-2017 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 BV404_RS12840 49d389c9a3560c5f0f833c508b4097d6 96 Pfam PF00436 Single-strand binding protein family 3 84 1.8E-7 T 09-03-2017 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 BV404_RS12840 49d389c9a3560c5f0f833c508b4097d6 96 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 2 95 3.4E-30 T 09-03-2017 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 BV404_RS12840 49d389c9a3560c5f0f833c508b4097d6 96 Gene3D G3DSA:2.40.50.140 2 94 2.1E-33 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS12840 49d389c9a3560c5f0f833c508b4097d6 96 SUPERFAMILY SSF50249 2 94 4.11E-25 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS04560 5f9ff77585a757db6ab6818891ac5a49 457 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 2 456 5.7E-117 T 09-03-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BV404_RS04560 5f9ff77585a757db6ab6818891ac5a49 457 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 410 456 1.3E-6 T 09-03-2017 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BV404_RS04560 5f9ff77585a757db6ab6818891ac5a49 457 PRINTS PR01005 Flagellar hook-associated protein signature 10 33 6.8E-11 T 09-03-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BV404_RS04560 5f9ff77585a757db6ab6818891ac5a49 457 PRINTS PR01005 Flagellar hook-associated protein signature 122 142 6.8E-11 T 09-03-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BV404_RS04560 5f9ff77585a757db6ab6818891ac5a49 457 PRINTS PR01005 Flagellar hook-associated protein signature 48 70 6.8E-11 T 09-03-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BV404_RS04560 5f9ff77585a757db6ab6818891ac5a49 457 PRINTS PR01005 Flagellar hook-associated protein signature 155 179 6.8E-11 T 09-03-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BV404_RS04560 5f9ff77585a757db6ab6818891ac5a49 457 PRINTS PR01005 Flagellar hook-associated protein signature 213 231 6.8E-11 T 09-03-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BV404_RS04560 5f9ff77585a757db6ab6818891ac5a49 457 Pfam PF00460 Flagella basal body rod protein 5 33 1.5E-8 T 09-03-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BV404_RS04560 5f9ff77585a757db6ab6818891ac5a49 457 SUPERFAMILY SSF64518 131 457 6.54E-28 T 09-03-2017 BV404_RS11170 7c794e5c619d18f234f71d24eb40d719 445 Gene3D G3DSA:3.40.1160.10 23 294 2.5E-70 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase BV404_RS11170 7c794e5c619d18f234f71d24eb40d719 445 Pfam PF00583 Acetyltransferase (GNAT) family 345 416 6.9E-7 T 09-03-2017 IPR000182 GNAT domain GO:0008080 BV404_RS11170 7c794e5c619d18f234f71d24eb40d719 445 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 445 225.201 T 09-03-2017 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 BV404_RS11170 7c794e5c619d18f234f71d24eb40d719 445 SUPERFAMILY SSF53633 4 294 2.62E-69 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase BV404_RS11170 7c794e5c619d18f234f71d24eb40d719 445 PIRSF PIRSF000423 1 445 1.5E-204 T 09-03-2017 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 BV404_RS11170 7c794e5c619d18f234f71d24eb40d719 445 SUPERFAMILY SSF55729 300 426 1.72E-19 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS11170 7c794e5c619d18f234f71d24eb40d719 445 Pfam PF00696 Amino acid kinase family 25 270 5.7E-30 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase BV404_RS11170 7c794e5c619d18f234f71d24eb40d719 445 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 8 445 6.5E-214 T 09-03-2017 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 BV404_RS11170 7c794e5c619d18f234f71d24eb40d719 445 Gene3D G3DSA:3.40.630.30 298 442 5.2E-44 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS02190 f64cb4d3547903285443a68f5943b4f3 281 Gene3D G3DSA:1.10.357.20 98 278 1.9E-51 T 09-03-2017 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 BV404_RS02190 f64cb4d3547903285443a68f5943b4f3 281 SUPERFAMILY SSF161093 99 278 1.16E-43 T 09-03-2017 BV404_RS02190 f64cb4d3547903285443a68f5943b4f3 281 Pfam PF01769 Divalent cation transporter 142 272 3.8E-26 T 09-03-2017 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 BV404_RS10760 8e3d7720350cc9bdd2e78ec73cca0f5d 554 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 551 9.0E-176 T 09-03-2017 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 BV404_RS10760 8e3d7720350cc9bdd2e78ec73cca0f5d 554 PIRSF PIRSF003128 1 554 3.8E-162 T 09-03-2017 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 BV404_RS10760 8e3d7720350cc9bdd2e78ec73cca0f5d 554 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 508 2.8E-18 T 09-03-2017 IPR003395 RecF/RecN/SMC, N-terminal BV404_RS10760 8e3d7720350cc9bdd2e78ec73cca0f5d 554 Gene3D G3DSA:3.40.50.300 1 205 5.0E-69 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS10760 8e3d7720350cc9bdd2e78ec73cca0f5d 554 SUPERFAMILY SSF52540 287 515 7.66E-68 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS10760 8e3d7720350cc9bdd2e78ec73cca0f5d 554 SUPERFAMILY SSF52540 1 199 7.66E-68 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS10760 8e3d7720350cc9bdd2e78ec73cca0f5d 554 Gene3D G3DSA:3.40.50.300 431 496 9.8E-5 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS10760 8e3d7720350cc9bdd2e78ec73cca0f5d 554 Gene3D G3DSA:3.40.50.300 357 381 9.8E-5 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11290 f331bb8d424a27650ce44c887e927d9c 159 Pfam PF07811 TadE-like protein 10 52 2.7E-9 T 09-03-2017 IPR012495 TadE-like BV404_RS06985 3415048a845e104f7da76190fe1ea849 195 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 5 190 29.929 T 09-03-2017 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 BV404_RS06985 3415048a845e104f7da76190fe1ea849 195 SUPERFAMILY SSF53448 10 187 1.48E-34 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases BV404_RS06985 3415048a845e104f7da76190fe1ea849 195 Pfam PF12804 MobA-like NTP transferase domain 10 158 3.0E-36 T 09-03-2017 IPR025877 MobA-like NTP transferase BV404_RS06985 3415048a845e104f7da76190fe1ea849 195 Gene3D G3DSA:3.90.550.10 6 192 1.1E-57 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases BV404_RS06985 3415048a845e104f7da76190fe1ea849 195 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 8 188 2.7E-74 T 09-03-2017 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 BV404_RS07420 12fddbc9ffbb284f95a904758ead41a3 148 Pfam PF01641 SelR domain 28 144 5.6E-50 T 09-03-2017 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 BV404_RS07420 12fddbc9ffbb284f95a904758ead41a3 148 Gene3D G3DSA:2.170.150.20 19 144 1.2E-56 T 09-03-2017 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 BV404_RS07420 12fddbc9ffbb284f95a904758ead41a3 148 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 24 143 1.2E-51 T 09-03-2017 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 BV404_RS07420 12fddbc9ffbb284f95a904758ead41a3 148 SUPERFAMILY SSF51316 23 144 3.03E-55 T 09-03-2017 IPR011057 Mss4-like BV404_RS14405 19d76c00d31e0a0013ff3fa893af3300 486 Hamap MF_00804 NAD/NADP-dependent betaine aldehyde dehydrogenase [betB]. 1 486 57.085 T 09-03-2017 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 BV404_RS14405 19d76c00d31e0a0013ff3fa893af3300 486 SUPERFAMILY SSF53720 4 477 5.76E-170 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 BV404_RS14405 19d76c00d31e0a0013ff3fa893af3300 486 Pfam PF00171 Aldehyde dehydrogenase family 16 474 5.6E-175 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 BV404_RS14405 19d76c00d31e0a0013ff3fa893af3300 486 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 246 253 - T 09-03-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 BV404_RS14405 19d76c00d31e0a0013ff3fa893af3300 486 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 274 285 - T 09-03-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 BV404_RS14405 19d76c00d31e0a0013ff3fa893af3300 486 Gene3D G3DSA:3.40.309.10 261 439 4.7E-71 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 BV404_RS14405 19d76c00d31e0a0013ff3fa893af3300 486 Gene3D G3DSA:3.40.605.10 3 260 8.5E-98 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 BV404_RS08685 506ab9c756e38107b5d5617dda2fe16c 547 TIGRFAM TIGR03799 NOD_PanD_pyr: putative pyridoxal-dependent aspartate 1-decarboxylase 6 527 2.5E-295 T 09-03-2017 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent BV404_RS08685 506ab9c756e38107b5d5617dda2fe16c 547 SUPERFAMILY SSF53383 25 528 2.45E-114 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase BV404_RS08685 506ab9c756e38107b5d5617dda2fe16c 547 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 62 442 1.3E-54 T 09-03-2017 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 BV404_RS08685 506ab9c756e38107b5d5617dda2fe16c 547 Gene3D G3DSA:3.40.640.10 116 395 4.2E-85 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 BV404_RS08685 506ab9c756e38107b5d5617dda2fe16c 547 Gene3D G3DSA:3.90.1150.10 396 529 3.1E-39 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 BV404_RS06900 dbf1c006535cdd562331d28b3505f17b 392 SUPERFAMILY SSF48452 273 381 7.59E-9 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BV404_RS06900 dbf1c006535cdd562331d28b3505f17b 392 SUPERFAMILY SSF48452 33 141 1.18E-5 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BV404_RS06900 dbf1c006535cdd562331d28b3505f17b 392 SUPERFAMILY SSF48452 104 232 4.88E-12 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BV404_RS06900 dbf1c006535cdd562331d28b3505f17b 392 Gene3D G3DSA:1.25.40.10 25 119 1.5E-5 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BV404_RS06900 dbf1c006535cdd562331d28b3505f17b 392 Pfam PF13432 Tetratricopeptide repeat 105 164 2.1E-4 T 09-03-2017 BV404_RS06900 dbf1c006535cdd562331d28b3505f17b 392 Gene3D G3DSA:1.25.40.10 268 372 6.9E-9 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BV404_RS06900 dbf1c006535cdd562331d28b3505f17b 392 Gene3D G3DSA:1.25.40.10 120 229 4.6E-13 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BV404_RS03635 b812601c881cb7a52b2eb6a1077104f0 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 5.9E-16 T 09-03-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BV404_RS03635 b812601c881cb7a52b2eb6a1077104f0 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 5.9E-16 T 09-03-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BV404_RS03635 b812601c881cb7a52b2eb6a1077104f0 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 5.9E-16 T 09-03-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BV404_RS03635 b812601c881cb7a52b2eb6a1077104f0 89 PIRSF PIRSF004669 1 89 1.9E-28 T 09-03-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BV404_RS03635 b812601c881cb7a52b2eb6a1077104f0 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 8.3E-32 T 09-03-2017 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 BV404_RS03635 b812601c881cb7a52b2eb6a1077104f0 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 1.0E-26 T 09-03-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BV404_RS11510 642f5f7dcceaa7a01c5dc6d10e7f05f3 238 SMART SM00862 156 232 2.4E-14 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BV404_RS11510 642f5f7dcceaa7a01c5dc6d10e7f05f3 238 Pfam PF00072 Response regulator receiver domain 6 113 4.8E-27 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS11510 642f5f7dcceaa7a01c5dc6d10e7f05f3 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 2.7E-17 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BV404_RS11510 642f5f7dcceaa7a01c5dc6d10e7f05f3 238 SUPERFAMILY SSF52172 2 128 4.13E-36 T 09-03-2017 IPR011006 CheY-like superfamily BV404_RS11510 642f5f7dcceaa7a01c5dc6d10e7f05f3 238 Gene3D G3DSA:3.40.50.2300 2 130 1.1E-36 T 09-03-2017 BV404_RS11510 642f5f7dcceaa7a01c5dc6d10e7f05f3 238 SUPERFAMILY SSF46894 137 233 3.4E-21 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BV404_RS11510 642f5f7dcceaa7a01c5dc6d10e7f05f3 238 SMART SM00448 4 114 2.0E-37 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS11510 642f5f7dcceaa7a01c5dc6d10e7f05f3 238 Gene3D G3DSA:1.10.10.10 134 233 3.1E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS09095 de91d7b5c6c9752d1866e99cc81a297e 276 Pfam PF00665 Integrase core domain 118 231 1.4E-25 T 09-03-2017 IPR001584 Integrase, catalytic core GO:0015074 BV404_RS09095 de91d7b5c6c9752d1866e99cc81a297e 276 Gene3D G3DSA:3.30.420.10 116 269 1.3E-33 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 BV404_RS09095 de91d7b5c6c9752d1866e99cc81a297e 276 SUPERFAMILY SSF53098 116 271 1.82E-35 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 BV404_RS06810 85c39a158216664db2e277260f44094e 215 Pfam PF14497 Glutathione S-transferase, C-terminal domain 125 202 3.8E-7 T 09-03-2017 IPR004046 Glutathione S-transferase, C-terminal BV404_RS06810 85c39a158216664db2e277260f44094e 215 SUPERFAMILY SSF47616 85 213 8.1E-32 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like BV404_RS06810 85c39a158216664db2e277260f44094e 215 Gene3D G3DSA:1.20.1050.10 89 214 1.1E-51 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like BV404_RS06810 85c39a158216664db2e277260f44094e 215 Gene3D G3DSA:3.40.30.10 6 83 1.5E-27 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS06810 85c39a158216664db2e277260f44094e 215 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 83 2.8E-16 T 09-03-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 BV404_RS06810 85c39a158216664db2e277260f44094e 215 SUPERFAMILY SSF52833 3 89 3.25E-23 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS06810 85c39a158216664db2e277260f44094e 215 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 5 214 5.9E-92 T 09-03-2017 IPR005955 Maleylacetoacetate isomerase GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-71182 BV404_RS06035 057f58138ea3a5742fb5adbcf7cd86a3 238 Gene3D G3DSA:3.40.30.10 70 235 4.0E-30 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS06035 057f58138ea3a5742fb5adbcf7cd86a3 238 Pfam PF13462 Thioredoxin 78 233 8.8E-14 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS06035 057f58138ea3a5742fb5adbcf7cd86a3 238 SUPERFAMILY SSF52833 67 233 7.87E-28 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS03800 ff68e90d68df1dd93a475698cd7c30fb 936 PIRSF PIRSF000157 1 935 0.0 T 09-03-2017 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 BV404_RS03800 ff68e90d68df1dd93a475698cd7c30fb 936 SUPERFAMILY SSF52518 122 546 8.1E-88 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold BV404_RS03800 ff68e90d68df1dd93a475698cd7c30fb 936 Gene3D G3DSA:3.40.50.970 163 557 4.2E-79 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold BV404_RS03800 ff68e90d68df1dd93a475698cd7c30fb 936 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 51 9.4E-14 T 09-03-2017 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 BV404_RS03800 ff68e90d68df1dd93a475698cd7c30fb 936 Gene3D G3DSA:3.40.50.970 594 790 5.2E-26 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold BV404_RS03800 ff68e90d68df1dd93a475698cd7c30fb 936 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 792 933 9.4E-55 T 09-03-2017 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 BV404_RS03800 ff68e90d68df1dd93a475698cd7c30fb 936 SMART SM00861 594 787 4.0E-63 T 09-03-2017 IPR005475 Transketolase-like, pyrimidine-binding domain BV404_RS03800 ff68e90d68df1dd93a475698cd7c30fb 936 Pfam PF00676 Dehydrogenase E1 component 222 513 3.7E-48 T 09-03-2017 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 BV404_RS03800 ff68e90d68df1dd93a475698cd7c30fb 936 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 933 0.0 T 09-03-2017 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 BV404_RS03800 ff68e90d68df1dd93a475698cd7c30fb 936 SUPERFAMILY SSF52518 577 794 8.33E-53 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold BV404_RS03800 ff68e90d68df1dd93a475698cd7c30fb 936 Pfam PF02779 Transketolase, pyrimidine binding domain 594 788 5.9E-66 T 09-03-2017 IPR005475 Transketolase-like, pyrimidine-binding domain BV404_RS05620 a22f953d95132345351ddb74abc24d46 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 332 446 1.3E-51 T 09-03-2017 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 BV404_RS05620 a22f953d95132345351ddb74abc24d46 456 Gene3D G3DSA:1.20.200.10 120 390 2.9E-89 T 09-03-2017 BV404_RS05620 a22f953d95132345351ddb74abc24d46 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 455 7.0E-150 T 09-03-2017 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BV404_RS05620 a22f953d95132345351ddb74abc24d46 456 Gene3D G3DSA:1.10.40.30 391 446 2.2E-33 T 09-03-2017 BV404_RS05620 a22f953d95132345351ddb74abc24d46 456 Pfam PF00206 Lyase 14 313 1.5E-73 T 09-03-2017 IPR022761 Fumarate lyase, N-terminal BV404_RS05620 a22f953d95132345351ddb74abc24d46 456 ProSitePatterns PS00163 Fumarate lyases signature. 295 304 - T 09-03-2017 IPR020557 Fumarate lyase, conserved site GO:0003824 BV404_RS05620 a22f953d95132345351ddb74abc24d46 456 PRINTS PR00149 Fumarate lyase superfamily signature 252 279 8.6E-19 T 09-03-2017 IPR000362 Fumarate lyase family BV404_RS05620 a22f953d95132345351ddb74abc24d46 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 8.6E-19 T 09-03-2017 IPR000362 Fumarate lyase family BV404_RS05620 a22f953d95132345351ddb74abc24d46 456 PRINTS PR00149 Fumarate lyase superfamily signature 295 311 8.6E-19 T 09-03-2017 IPR000362 Fumarate lyase family BV404_RS05620 a22f953d95132345351ddb74abc24d46 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 8.6E-19 T 09-03-2017 IPR000362 Fumarate lyase family BV404_RS05620 a22f953d95132345351ddb74abc24d46 456 Gene3D G3DSA:1.10.275.10 1 119 1.3E-49 T 09-03-2017 IPR024083 Fumarase/histidase, N-terminal BV404_RS05620 a22f953d95132345351ddb74abc24d46 456 SUPERFAMILY SSF48557 4 449 1.88E-110 T 09-03-2017 IPR008948 L-Aspartase-like GO:0003824 BV404_RS10615 fd5597fcb8ad873d60e964654057efc9 100 Pfam PF11743 Protein of unknown function (DUF3301) 6 96 6.1E-29 T 09-03-2017 IPR021732 Protein of unknown function DUF3301 BV404_RS09245 919cd5412d1633fd7cdf957233e36073 415 Pfam PF01547 Bacterial extracellular solute-binding protein 37 281 1.4E-21 T 09-03-2017 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 BV404_RS09245 919cd5412d1633fd7cdf957233e36073 415 Gene3D G3DSA:3.40.190.10 26 156 4.8E-7 T 09-03-2017 BV404_RS09245 919cd5412d1633fd7cdf957233e36073 415 SUPERFAMILY SSF53850 21 415 4.46E-61 T 09-03-2017 BV404_RS09245 919cd5412d1633fd7cdf957233e36073 415 Gene3D G3DSA:3.40.190.10 157 331 5.1E-24 T 09-03-2017 BV404_RS09745 edfcc4529c46c34f6c0069c17a109e75 299 Pfam PF00701 Dihydrodipicolinate synthetase family 4 291 9.5E-49 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 BV404_RS09745 edfcc4529c46c34f6c0069c17a109e75 299 PIRSF PIRSF001365 1 299 3.0E-67 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 BV404_RS09745 edfcc4529c46c34f6c0069c17a109e75 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 6.6E-6 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 BV404_RS09745 edfcc4529c46c34f6c0069c17a109e75 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 6.6E-6 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 BV404_RS09745 edfcc4529c46c34f6c0069c17a109e75 299 SUPERFAMILY SSF51569 1 295 1.26E-69 T 09-03-2017 BV404_RS09745 edfcc4529c46c34f6c0069c17a109e75 299 Gene3D G3DSA:3.20.20.70 1 295 1.9E-73 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS09745 edfcc4529c46c34f6c0069c17a109e75 299 SMART SM01130 3 294 2.4E-62 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 BV404_RS05470 8e2e885a24d5942ea18cc874de7018e0 315 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 310 52.176 T 09-03-2017 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 BV404_RS05470 8e2e885a24d5942ea18cc874de7018e0 315 PIRSF PIRSF006621 1 314 3.2E-73 T 09-03-2017 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 BV404_RS05470 8e2e885a24d5942ea18cc874de7018e0 315 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 09-03-2017 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 BV404_RS05470 8e2e885a24d5942ea18cc874de7018e0 315 Gene3D G3DSA:3.20.20.70 2 241 3.0E-61 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS05470 8e2e885a24d5942ea18cc874de7018e0 315 Pfam PF01207 Dihydrouridine synthase (Dus) 5 297 4.6E-77 T 09-03-2017 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 BV404_RS05470 8e2e885a24d5942ea18cc874de7018e0 315 SUPERFAMILY SSF51395 1 311 1.04E-72 T 09-03-2017 BV404_RS10960 9352aad98de0b85d14da4c063727d3f6 404 Gene3D G3DSA:3.40.640.10 17 254 2.1E-97 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 BV404_RS10960 9352aad98de0b85d14da4c063727d3f6 404 PIRSF PIRSF005572 2 384 1.5E-138 T 09-03-2017 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 BV404_RS10960 9352aad98de0b85d14da4c063727d3f6 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 2.0E-229 T 09-03-2017 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 BV404_RS10960 9352aad98de0b85d14da4c063727d3f6 404 Pfam PF00266 Aminotransferase class-V 5 368 1.5E-88 T 09-03-2017 IPR000192 Aminotransferase class V domain BV404_RS10960 9352aad98de0b85d14da4c063727d3f6 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 54.249 T 09-03-2017 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 BV404_RS10960 9352aad98de0b85d14da4c063727d3f6 404 SUPERFAMILY SSF53383 5 391 7.66E-115 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase BV404_RS10960 9352aad98de0b85d14da4c063727d3f6 404 Gene3D G3DSA:3.90.1150.10 255 374 4.9E-53 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 BV404_RS10960 9352aad98de0b85d14da4c063727d3f6 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 09-03-2017 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site BV404_RS05825 ff86e5fbac6614b999dec49d9aecd2fa 1486 Pfam PF16330 MukB hinge domain 647 811 1.0E-72 T 09-03-2017 IPR032520 MukB, hinge domain BV404_RS05825 ff86e5fbac6614b999dec49d9aecd2fa 1486 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 1 1472 10.832 T 09-03-2017 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 BV404_RS05825 ff86e5fbac6614b999dec49d9aecd2fa 1486 Gene3D G3DSA:3.40.1140.10 1 225 1.6E-43 T 09-03-2017 BV404_RS05825 ff86e5fbac6614b999dec49d9aecd2fa 1486 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1337 1425 5.5E-15 T 09-03-2017 BV404_RS05825 ff86e5fbac6614b999dec49d9aecd2fa 1486 SUPERFAMILY SSF52540 1284 1434 1.12E-5 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS05825 ff86e5fbac6614b999dec49d9aecd2fa 1486 SUPERFAMILY SSF52540 21 55 1.12E-5 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS05825 ff86e5fbac6614b999dec49d9aecd2fa 1486 PIRSF PIRSF005246 1 1486 0.0 T 09-03-2017 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 BV404_RS05825 ff86e5fbac6614b999dec49d9aecd2fa 1486 SUPERFAMILY SSF52540 23 224 1.67E-23 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS05825 ff86e5fbac6614b999dec49d9aecd2fa 1486 Pfam PF04310 MukB N-terminal 2 227 5.6E-122 T 09-03-2017 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 BV404_RS05555 3b902a5c17040893650b1c91dedb938d 350 Pfam PF04055 Radical SAM superfamily 50 200 7.3E-15 T 09-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 BV404_RS05555 3b902a5c17040893650b1c91dedb938d 350 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.534 T 09-03-2017 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 BV404_RS05555 3b902a5c17040893650b1c91dedb938d 350 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 6.7E-20 T 09-03-2017 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 BV404_RS05555 3b902a5c17040893650b1c91dedb938d 350 TIGRFAM TIGR00433 bioB: biotin synthase 15 310 4.4E-125 T 09-03-2017 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 BV404_RS05555 3b902a5c17040893650b1c91dedb938d 350 SUPERFAMILY SSF102114 5 310 4.32E-90 T 09-03-2017 BV404_RS05555 3b902a5c17040893650b1c91dedb938d 350 Gene3D G3DSA:3.20.20.70 5 313 3.1E-103 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS05555 3b902a5c17040893650b1c91dedb938d 350 PIRSF PIRSF001619 1 318 1.1E-136 T 09-03-2017 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 BV404_RS05555 3b902a5c17040893650b1c91dedb938d 350 SMART SM00876 220 312 4.0E-46 T 09-03-2017 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 BV404_RS05555 3b902a5c17040893650b1c91dedb938d 350 SMART SM00729 43 255 2.4E-37 T 09-03-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 BV404_RS02050 7a721437169abf092b6f118ac358ee10 766 Gene3D G3DSA:3.40.1090.10 38 234 2.5E-15 T 09-03-2017 BV404_RS02050 7a721437169abf092b6f118ac358ee10 766 Pfam PF01734 Patatin-like phospholipase 40 231 2.8E-31 T 09-03-2017 IPR002641 Patatin/Phospholipase A2-related GO:0006629 BV404_RS02050 7a721437169abf092b6f118ac358ee10 766 Pfam PF07244 Surface antigen variable number repeat 351 421 1.8E-6 T 09-03-2017 IPR010827 Surface antigen variable number GO:0019867 BV404_RS02050 7a721437169abf092b6f118ac358ee10 766 SUPERFAMILY SSF52151 35 107 1.52E-58 T 09-03-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 BV404_RS02050 7a721437169abf092b6f118ac358ee10 766 SUPERFAMILY SSF52151 141 329 1.52E-58 T 09-03-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 BV404_RS00525 dbb1d2d0cd08b817b1626de6978c8384 803 PIRSF PIRSF000727 5 803 2.0E-285 T 09-03-2017 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+2.7.2.4+1.1.1.3|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4+1.1.1.3|KEGG: 00300+2.7.2.4+1.1.1.3|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 BV404_RS00525 dbb1d2d0cd08b817b1626de6978c8384 803 Gene3D G3DSA:3.40.50.720 448 622 2.2E-50 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS00525 dbb1d2d0cd08b817b1626de6978c8384 803 Pfam PF00742 Homoserine dehydrogenase 601 796 3.2E-43 T 09-03-2017 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 BV404_RS00525 dbb1d2d0cd08b817b1626de6978c8384 803 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 457 593 3.2E-14 T 09-03-2017 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 BV404_RS00525 dbb1d2d0cd08b817b1626de6978c8384 803 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 09-03-2017 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 BV404_RS00525 dbb1d2d0cd08b817b1626de6978c8384 803 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 8 445 2.4E-63 T 09-03-2017 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 BV404_RS00525 dbb1d2d0cd08b817b1626de6978c8384 803 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 647 669 - T 09-03-2017 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 BV404_RS00525 dbb1d2d0cd08b817b1626de6978c8384 803 Gene3D G3DSA:3.30.360.10 623 779 4.0E-51 T 09-03-2017 BV404_RS00525 dbb1d2d0cd08b817b1626de6978c8384 803 SUPERFAMILY SSF53633 5 291 3.53E-58 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase BV404_RS00525 dbb1d2d0cd08b817b1626de6978c8384 803 Gene3D G3DSA:3.40.1160.10 106 291 3.8E-47 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase BV404_RS00525 dbb1d2d0cd08b817b1626de6978c8384 803 Gene3D G3DSA:3.40.1160.10 3 52 3.8E-47 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase BV404_RS00525 dbb1d2d0cd08b817b1626de6978c8384 803 Pfam PF00696 Amino acid kinase family 5 274 1.7E-43 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase BV404_RS00525 dbb1d2d0cd08b817b1626de6978c8384 803 SUPERFAMILY SSF55347 601 784 1.7E-46 T 09-03-2017 BV404_RS00525 dbb1d2d0cd08b817b1626de6978c8384 803 SUPERFAMILY SSF51735 448 623 1.0E-34 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS14390 8b983b20e23648f41c2506018c7fd17c 279 SUPERFAMILY SSF161098 86 270 7.85E-39 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS14390 8b983b20e23648f41c2506018c7fd17c 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 265 2.8E-25 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS14390 8b983b20e23648f41c2506018c7fd17c 279 TIGRFAM TIGR03416 ABC_choXWV_perm: choline ABC transporter, permease protein 4 270 1.0E-129 T 09-03-2017 IPR017784 ABC transporter, choline, permease protein BV404_RS14390 8b983b20e23648f41c2506018c7fd17c 279 Gene3D G3DSA:1.10.3720.10 85 266 1.9E-35 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS03975 7949f0c1da7279b8a7229997bcc1aada 651 Pfam PF01578 Cytochrome C assembly protein 89 297 2.0E-54 T 09-03-2017 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 BV404_RS03975 7949f0c1da7279b8a7229997bcc1aada 651 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 639 2.6E-128 T 09-03-2017 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal BV404_RS03975 7949f0c1da7279b8a7229997bcc1aada 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 7.3E-95 T 09-03-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BV404_RS03975 7949f0c1da7279b8a7229997bcc1aada 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 7.3E-95 T 09-03-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BV404_RS03975 7949f0c1da7279b8a7229997bcc1aada 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 7.3E-95 T 09-03-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BV404_RS03975 7949f0c1da7279b8a7229997bcc1aada 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 7.3E-95 T 09-03-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BV404_RS03975 7949f0c1da7279b8a7229997bcc1aada 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 7.3E-95 T 09-03-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BV404_RS03975 7949f0c1da7279b8a7229997bcc1aada 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 7.3E-95 T 09-03-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BV404_RS03975 7949f0c1da7279b8a7229997bcc1aada 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 7.3E-95 T 09-03-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BV404_RS03975 7949f0c1da7279b8a7229997bcc1aada 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 7.3E-95 T 09-03-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BV404_RS03975 7949f0c1da7279b8a7229997bcc1aada 651 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 642 2.6E-260 T 09-03-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 BV404_RS03975 7949f0c1da7279b8a7229997bcc1aada 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 3.5E-62 T 09-03-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 BV404_RS03975 7949f0c1da7279b8a7229997bcc1aada 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 3.5E-62 T 09-03-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 BV404_RS03975 7949f0c1da7279b8a7229997bcc1aada 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 3.5E-62 T 09-03-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 BV404_RS03975 7949f0c1da7279b8a7229997bcc1aada 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 3.5E-62 T 09-03-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 BV404_RS03975 7949f0c1da7279b8a7229997bcc1aada 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 3.5E-62 T 09-03-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 BV404_RS03975 7949f0c1da7279b8a7229997bcc1aada 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 632 645 3.5E-62 T 09-03-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 BV404_RS03975 7949f0c1da7279b8a7229997bcc1aada 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 3.5E-62 T 09-03-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 BV404_RS07595 6895416226c84c51bd7ed3357548e44c 363 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 4 174 3.8E-67 T 09-03-2017 IPR005126 NapC/NirT cytochrome c, N-terminal BV404_RS07595 6895416226c84c51bd7ed3357548e44c 363 PIRSF PIRSF000014 1 363 1.3E-146 T 09-03-2017 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 BV404_RS07595 6895416226c84c51bd7ed3357548e44c 363 SUPERFAMILY SSF48695 8 179 1.99E-50 T 09-03-2017 IPR011031 Multihaem cytochrome BV404_RS07595 6895416226c84c51bd7ed3357548e44c 363 Gene3D G3DSA:1.10.3820.10 4 176 3.3E-28 T 09-03-2017 BV404_RS07595 6895416226c84c51bd7ed3357548e44c 363 Gene3D G3DSA:1.10.3820.10 311 317 3.3E-28 T 09-03-2017 BV404_RS02710 dec55f212847a95a85d50f6183a8102a 198 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 197 3.4E-107 T 09-03-2017 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 BV404_RS02710 dec55f212847a95a85d50f6183a8102a 198 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 198 29.873 T 09-03-2017 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 BV404_RS02710 dec55f212847a95a85d50f6183a8102a 198 PIRSF PIRSF006102 1 198 1.1E-67 T 09-03-2017 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 BV404_RS02710 dec55f212847a95a85d50f6183a8102a 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 196 1.7E-61 T 09-03-2017 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 BV404_RS02135 3b2ae8e6e0573a37ee36c6bda32ce143 556 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 75 452 7.7E-76 T 09-03-2017 IPR000914 Solute-binding protein family 5 domain BV404_RS02135 3b2ae8e6e0573a37ee36c6bda32ce143 556 SUPERFAMILY SSF53850 40 539 3.26E-106 T 09-03-2017 BV404_RS02135 3b2ae8e6e0573a37ee36c6bda32ce143 556 PIRSF PIRSF002741 7 532 3.3E-66 T 09-03-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 BV404_RS02135 3b2ae8e6e0573a37ee36c6bda32ce143 556 Gene3D G3DSA:3.10.105.10 270 511 9.8E-51 T 09-03-2017 BV404_RS02135 3b2ae8e6e0573a37ee36c6bda32ce143 556 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 80 102 - T 09-03-2017 IPR023765 Solute-binding protein family 5, conserved site BV404_RS02135 3b2ae8e6e0573a37ee36c6bda32ce143 556 Gene3D G3DSA:3.90.76.10 43 192 5.9E-40 T 09-03-2017 BV404_RS00880 3c6c4fd7b84b1511fe592bc52e837a6a 189 Gene3D G3DSA:3.40.50.360 13 182 1.8E-46 T 09-03-2017 IPR029039 Flavoprotein-like domain BV404_RS00880 3c6c4fd7b84b1511fe592bc52e837a6a 189 Pfam PF02525 Flavodoxin-like fold 13 179 2.2E-41 T 09-03-2017 IPR003680 Flavodoxin-like fold BV404_RS00880 3c6c4fd7b84b1511fe592bc52e837a6a 189 SUPERFAMILY SSF52218 13 184 2.3E-47 T 09-03-2017 IPR029039 Flavoprotein-like domain BV404_RS00880 3c6c4fd7b84b1511fe592bc52e837a6a 189 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 8 188 47.342 T 09-03-2017 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 BV404_RS07190 b76fc3cc31f39d8a31549ad3b70f5a24 576 Gene3D G3DSA:3.30.565.10 259 433 1.8E-46 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS07190 b76fc3cc31f39d8a31549ad3b70f5a24 576 Gene3D G3DSA:1.10.287.130 201 258 1.1E-17 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS07190 b76fc3cc31f39d8a31549ad3b70f5a24 576 SMART SM00448 457 569 1.3E-37 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS07190 b76fc3cc31f39d8a31549ad3b70f5a24 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 384 4.0E-20 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS07190 b76fc3cc31f39d8a31549ad3b70f5a24 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 356 370 4.0E-20 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS07190 b76fc3cc31f39d8a31549ad3b70f5a24 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 409 4.0E-20 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS07190 b76fc3cc31f39d8a31549ad3b70f5a24 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 428 4.0E-20 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS07190 b76fc3cc31f39d8a31549ad3b70f5a24 576 SMART SM00387 320 431 3.4E-37 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS07190 b76fc3cc31f39d8a31549ad3b70f5a24 576 SUPERFAMILY SSF52172 455 575 4.84E-38 T 09-03-2017 IPR011006 CheY-like superfamily BV404_RS07190 b76fc3cc31f39d8a31549ad3b70f5a24 576 Pfam PF00072 Response regulator receiver domain 459 566 2.0E-29 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS07190 b76fc3cc31f39d8a31549ad3b70f5a24 576 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 321 430 2.2E-28 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS07190 b76fc3cc31f39d8a31549ad3b70f5a24 576 SUPERFAMILY SSF55874 262 429 6.55E-48 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS07190 b76fc3cc31f39d8a31549ad3b70f5a24 576 SMART SM00388 209 273 3.0E-22 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS07190 b76fc3cc31f39d8a31549ad3b70f5a24 576 SUPERFAMILY SSF47384 194 274 9.61E-23 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS07190 b76fc3cc31f39d8a31549ad3b70f5a24 576 Gene3D G3DSA:3.40.50.2300 456 575 3.0E-42 T 09-03-2017 BV404_RS07190 b76fc3cc31f39d8a31549ad3b70f5a24 576 Pfam PF00512 His Kinase A (phospho-acceptor) domain 209 273 6.6E-20 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS03705 1e50190dcefa179d9fd7f7203a1b6ec8 381 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 198 214 - T 09-03-2017 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site BV404_RS03705 1e50190dcefa179d9fd7f7203a1b6ec8 381 SUPERFAMILY SSF52283 4 130 3.19E-22 T 09-03-2017 BV404_RS03705 1e50190dcefa179d9fd7f7203a1b6ec8 381 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 358 45.543 T 09-03-2017 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181 BV404_RS03705 1e50190dcefa179d9fd7f7203a1b6ec8 381 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 281 1.0E-22 T 09-03-2017 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 BV404_RS03705 1e50190dcefa179d9fd7f7203a1b6ec8 381 SUPERFAMILY SSF51735 93 257 3.49E-33 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS03705 1e50190dcefa179d9fd7f7203a1b6ec8 381 Gene3D G3DSA:3.40.50.720 1 115 3.8E-32 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS03705 1e50190dcefa179d9fd7f7203a1b6ec8 381 Gene3D G3DSA:3.40.50.720 116 259 8.6E-36 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS03705 1e50190dcefa179d9fd7f7203a1b6ec8 381 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 257 2.4E-32 T 09-03-2017 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 BV404_RS03705 1e50190dcefa179d9fd7f7203a1b6ec8 381 Pfam PF11890 Domain of unknown function (DUF3410) 290 370 1.1E-28 T 09-03-2017 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181 BV404_RS04055 2d6f00d53efb437b603078f73ac2d053 317 Gene3D G3DSA:3.40.50.720 1 133 2.3E-38 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS04055 2d6f00d53efb437b603078f73ac2d053 317 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 119 6.7E-22 T 09-03-2017 IPR000683 Oxidoreductase, N-terminal GO:0016491 BV404_RS04055 2d6f00d53efb437b603078f73ac2d053 317 SUPERFAMILY SSF55347 126 259 5.01E-11 T 09-03-2017 BV404_RS04055 2d6f00d53efb437b603078f73ac2d053 317 SUPERFAMILY SSF51735 2 141 3.18E-40 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS04055 2d6f00d53efb437b603078f73ac2d053 317 Gene3D G3DSA:3.30.360.10 134 310 3.1E-17 T 09-03-2017 BV404_RS14205 78192563ed5abf37439d47819dbd7817 131 Pfam PF03899 ATP synthase I chain 15 111 4.5E-21 T 09-03-2017 IPR005598 ATP synthase protein I BV404_RS05675 3aa56ede5570663b4aa58b38addbec1c 203 Gene3D G3DSA:3.40.50.880 2 203 3.0E-70 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like BV404_RS05675 3aa56ede5570663b4aa58b38addbec1c 203 SUPERFAMILY SSF52317 4 202 1.41E-53 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like BV404_RS05675 3aa56ede5570663b4aa58b38addbec1c 203 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 5 202 4.1E-68 T 09-03-2017 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 BV404_RS05675 3aa56ede5570663b4aa58b38addbec1c 203 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 4 203 34.135 T 09-03-2017 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 BV404_RS05675 3aa56ede5570663b4aa58b38addbec1c 203 PIRSF PIRSF000495 3 203 5.0E-65 T 09-03-2017 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 BV404_RS05675 3aa56ede5570663b4aa58b38addbec1c 203 Pfam PF00117 Glutamine amidotransferase class-I 7 201 2.3E-18 T 09-03-2017 IPR017926 Glutamine amidotransferase BV404_RS08975 00816f68594184773801dc75365d1186 59 Gene3D G3DSA:2.20.25.10 8 57 1.3E-25 T 09-03-2017 BV404_RS08975 00816f68594184773801dc75365d1186 59 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 27.853 T 09-03-2017 IPR005651 Uncharacterised protein family UPF0434/Trm112 BV404_RS08975 00816f68594184773801dc75365d1186 59 SUPERFAMILY SSF158997 1 54 7.59E-21 T 09-03-2017 BV404_RS08975 00816f68594184773801dc75365d1186 59 Pfam PF03966 Trm112p-like protein 2 41 2.7E-11 T 09-03-2017 IPR005651 Uncharacterised protein family UPF0434/Trm112 BV404_RS10500 18dc04d95106de403397c36a5a851316 225 Gene3D G3DSA:1.10.3720.10 14 224 5.7E-44 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS10500 18dc04d95106de403397c36a5a851316 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 223 7.5E-24 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS10500 18dc04d95106de403397c36a5a851316 225 SUPERFAMILY SSF161098 15 210 3.4E-47 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS02475 cb2ae14e9df806f61f4b58b39d1e7879 113 Pfam PF10973 Protein of unknown function (DUF2799) 28 108 9.4E-22 T 09-03-2017 IPR021242 Protein of unknown function DUF2799 BV404_RS08260 2fed52673ac34abd919f38e319cd0d0c 362 Hamap MF_01841 Agmatine deiminase [aguA]. 5 360 58.517 T 09-03-2017 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 BV404_RS08260 2fed52673ac34abd919f38e319cd0d0c 362 SUPERFAMILY SSF55909 3 360 1.04E-135 T 09-03-2017 BV404_RS08260 2fed52673ac34abd919f38e319cd0d0c 362 TIGRFAM TIGR03380 agmatine_aguA: agmatine deiminase 6 360 4.3E-165 T 09-03-2017 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 BV404_RS08260 2fed52673ac34abd919f38e319cd0d0c 362 Gene3D G3DSA:3.75.10.10 4 360 1.3E-141 T 09-03-2017 BV404_RS08260 2fed52673ac34abd919f38e319cd0d0c 362 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 14 359 1.3E-118 T 09-03-2017 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 BV404_RS05030 e49057963aed11b82a6f49288fcd97fa 471 Gene3D G3DSA:3.40.640.10 144 345 6.7E-69 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 BV404_RS05030 e49057963aed11b82a6f49288fcd97fa 471 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 3.4E-13 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BV404_RS05030 e49057963aed11b82a6f49288fcd97fa 471 SUPERFAMILY SSF46785 2 70 7.69E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS05030 e49057963aed11b82a6f49288fcd97fa 471 Gene3D G3DSA:1.10.10.10 2 67 6.9E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS05030 e49057963aed11b82a6f49288fcd97fa 471 SMART SM00345 7 66 1.2E-12 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BV404_RS05030 e49057963aed11b82a6f49288fcd97fa 471 Pfam PF00155 Aminotransferase class I and II 146 456 3.8E-33 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BV404_RS05030 e49057963aed11b82a6f49288fcd97fa 471 Gene3D G3DSA:3.90.1150.10 346 465 1.0E-8 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 BV404_RS05030 e49057963aed11b82a6f49288fcd97fa 471 SUPERFAMILY SSF53383 93 466 1.2E-93 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase BV404_RS01085 c3a6bf57a129d56512647a54b4f913a8 301 Pfam PF00892 EamA-like transporter family 7 137 8.7E-13 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 BV404_RS01085 c3a6bf57a129d56512647a54b4f913a8 301 Pfam PF00892 EamA-like transporter family 143 268 1.3E-11 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 BV404_RS01085 c3a6bf57a129d56512647a54b4f913a8 301 SUPERFAMILY SSF103481 40 141 6.15E-13 T 09-03-2017 BV404_RS01085 c3a6bf57a129d56512647a54b4f913a8 301 SUPERFAMILY SSF103481 178 271 3.79E-14 T 09-03-2017 BV404_RS09255 276221a06499353cd84cba9739af0101 241 Pfam PF00072 Response regulator receiver domain 6 116 1.4E-30 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS09255 276221a06499353cd84cba9739af0101 241 Gene3D G3DSA:3.40.50.2300 3 132 4.9E-43 T 09-03-2017 BV404_RS09255 276221a06499353cd84cba9739af0101 241 Gene3D G3DSA:1.10.10.10 133 236 2.0E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS09255 276221a06499353cd84cba9739af0101 241 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 233 1.7E-13 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BV404_RS09255 276221a06499353cd84cba9739af0101 241 SMART SM00448 4 115 1.9E-42 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS09255 276221a06499353cd84cba9739af0101 241 SUPERFAMILY SSF52172 2 130 1.57E-41 T 09-03-2017 IPR011006 CheY-like superfamily BV404_RS09255 276221a06499353cd84cba9739af0101 241 SUPERFAMILY SSF46894 130 234 3.12E-19 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BV404_RS09255 276221a06499353cd84cba9739af0101 241 SMART SM00862 157 233 4.2E-10 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BV404_RS14835 084a22e69fad44ed12d93af274ec345f 284 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 1 284 29.87 T 09-03-2017 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 BV404_RS14835 084a22e69fad44ed12d93af274ec345f 284 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 8 283 6.8E-108 T 09-03-2017 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 BV404_RS14835 084a22e69fad44ed12d93af274ec345f 284 Pfam PF01040 UbiA prenyltransferase family 24 266 3.9E-65 T 09-03-2017 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 BV404_RS12085 b45976b023ced05d0c67fa32bc807cda 502 SUPERFAMILY SSF52540 190 329 1.27E-5 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS12085 b45976b023ced05d0c67fa32bc807cda 502 Gene3D G3DSA:3.40.50.300 194 230 2.7E-5 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS12085 b45976b023ced05d0c67fa32bc807cda 502 Gene3D G3DSA:3.40.50.300 314 332 2.7E-5 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS07565 db8eee2604b32051f7fc3401353ea46a 253 Gene3D G3DSA:3.40.630.30 146 245 1.3E-15 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS07565 db8eee2604b32051f7fc3401353ea46a 253 Pfam PF13527 Acetyltransferase (GNAT) domain 163 242 7.6E-6 T 09-03-2017 BV404_RS07565 db8eee2604b32051f7fc3401353ea46a 253 SUPERFAMILY SSF55729 155 249 3.43E-16 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS07550 1e32b0f346d1343dfd5ba3627ce2163d 339 SUPERFAMILY SSF53850 42 264 6.26E-36 T 09-03-2017 BV404_RS07550 1e32b0f346d1343dfd5ba3627ce2163d 339 Gene3D G3DSA:3.40.190.10 126 213 3.2E-14 T 09-03-2017 BV404_RS07550 1e32b0f346d1343dfd5ba3627ce2163d 339 Pfam PF09084 NMT1/THI5 like 54 263 2.5E-23 T 09-03-2017 IPR015168 SsuA/THI5-like BV404_RS07550 1e32b0f346d1343dfd5ba3627ce2163d 339 SMART SM00062 43 270 0.0054 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BV404_RS12440 01be43950aab034e176d31c605772b39 164 Gene3D G3DSA:3.40.430.10 1 160 3.7E-59 T 09-03-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 BV404_RS12440 01be43950aab034e176d31c605772b39 164 Pfam PF00186 Dihydrofolate reductase 3 159 5.1E-60 T 09-03-2017 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 BV404_RS12440 01be43950aab034e176d31c605772b39 164 PIRSF PIRSF000194 1 162 1.5E-62 T 09-03-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 BV404_RS12440 01be43950aab034e176d31c605772b39 164 PRINTS PR00070 Dihydrofolate reductase signature 14 24 7.7E-14 T 09-03-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 BV404_RS12440 01be43950aab034e176d31c605772b39 164 PRINTS PR00070 Dihydrofolate reductase signature 41 52 7.7E-14 T 09-03-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 BV404_RS12440 01be43950aab034e176d31c605772b39 164 PRINTS PR00070 Dihydrofolate reductase signature 28 36 7.7E-14 T 09-03-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 BV404_RS12440 01be43950aab034e176d31c605772b39 164 PRINTS PR00070 Dihydrofolate reductase signature 92 106 7.7E-14 T 09-03-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 BV404_RS12440 01be43950aab034e176d31c605772b39 164 SUPERFAMILY SSF53597 1 160 8.61E-57 T 09-03-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 BV404_RS05515 e3d06fd5121c659622900f2cc679c159 317 Gene3D G3DSA:1.20.970.10 13 70 1.4E-12 T 09-03-2017 BV404_RS05515 e3d06fd5121c659622900f2cc679c159 317 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 1.4E-11 T 09-03-2017 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 BV404_RS05515 e3d06fd5121c659622900f2cc679c159 317 Gene3D G3DSA:3.40.1030.10 80 277 6.5E-29 T 09-03-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BV404_RS05515 e3d06fd5121c659622900f2cc679c159 317 SUPERFAMILY SSF47648 8 71 1.27E-14 T 09-03-2017 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 BV404_RS05515 e3d06fd5121c659622900f2cc679c159 317 SUPERFAMILY SSF52418 76 311 8.63E-39 T 09-03-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BV404_RS10410 f97b9d4a6d2db983b6ae0149b0b7323e 345 Pfam PF00534 Glycosyl transferases group 1 168 311 7.1E-21 T 09-03-2017 IPR001296 Glycosyl transferase, family 1 BV404_RS10410 f97b9d4a6d2db983b6ae0149b0b7323e 345 Pfam PF13439 Glycosyltransferase Family 4 13 128 1.9E-8 T 09-03-2017 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 BV404_RS10410 f97b9d4a6d2db983b6ae0149b0b7323e 345 SUPERFAMILY SSF53756 3 343 3.04E-50 T 09-03-2017 BV404_RS10410 f97b9d4a6d2db983b6ae0149b0b7323e 345 Gene3D G3DSA:3.40.50.2000 169 312 2.3E-11 T 09-03-2017 BV404_RS08430 1537fce8e657993c4834d8bccf0bce1d 595 SUPERFAMILY SSF90123 12 329 1.96E-55 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 BV404_RS08430 1537fce8e657993c4834d8bccf0bce1d 595 Gene3D G3DSA:1.20.1560.10 12 329 4.8E-48 T 09-03-2017 BV404_RS08430 1537fce8e657993c4834d8bccf0bce1d 595 Pfam PF00005 ABC transporter 369 512 7.3E-28 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS08430 1537fce8e657993c4834d8bccf0bce1d 595 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 20 554 1.8E-173 T 09-03-2017 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 BV404_RS08430 1537fce8e657993c4834d8bccf0bce1d 595 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS08430 1537fce8e657993c4834d8bccf0bce1d 595 SMART SM00382 375 558 6.5E-12 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS08430 1537fce8e657993c4834d8bccf0bce1d 595 SUPERFAMILY SSF52540 347 580 1.78E-58 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS08430 1537fce8e657993c4834d8bccf0bce1d 595 Gene3D G3DSA:3.40.50.300 358 587 3.4E-56 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS08430 1537fce8e657993c4834d8bccf0bce1d 595 Pfam PF00664 ABC transporter transmembrane region 25 292 9.6E-41 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 BV404_RS12625 a22da0a64673956cac61883e7c5f7149 544 PRINTS PR00811 Bacterial general secretion pathway protein D signature 340 364 3.1E-19 T 09-03-2017 IPR001775 GspD/PilQ family BV404_RS12625 a22da0a64673956cac61883e7c5f7149 544 PRINTS PR00811 Bacterial general secretion pathway protein D signature 508 522 3.1E-19 T 09-03-2017 IPR001775 GspD/PilQ family BV404_RS12625 a22da0a64673956cac61883e7c5f7149 544 PRINTS PR00811 Bacterial general secretion pathway protein D signature 271 281 3.1E-19 T 09-03-2017 IPR001775 GspD/PilQ family BV404_RS12625 a22da0a64673956cac61883e7c5f7149 544 PRINTS PR00811 Bacterial general secretion pathway protein D signature 485 503 3.1E-19 T 09-03-2017 IPR001775 GspD/PilQ family BV404_RS12625 a22da0a64673956cac61883e7c5f7149 544 SMART SM00965 93 141 1.0E-6 T 09-03-2017 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 BV404_RS12625 a22da0a64673956cac61883e7c5f7149 544 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 237 520 4.0E-93 T 09-03-2017 IPR013358 Pilus biogenesis, MshL BV404_RS12625 a22da0a64673956cac61883e7c5f7149 544 Pfam PF00263 Bacterial type II and III secretion system protein 345 520 2.9E-42 T 09-03-2017 IPR004846 Type II/III secretion system GO:0009306 BV404_RS12625 a22da0a64673956cac61883e7c5f7149 544 Pfam PF07655 Secretin N-terminal domain 145 242 1.6E-24 T 09-03-2017 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 BV404_RS05090 011ffbd3e66174da475006fba51bb03f 295 Pfam PF00550 Phosphopantetheine attachment site 222 276 1.6E-5 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain BV404_RS05090 011ffbd3e66174da475006fba51bb03f 295 SUPERFAMILY SSF47336 215 283 7.07E-7 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain BV404_RS05090 011ffbd3e66174da475006fba51bb03f 295 Pfam PF00857 Isochorismatase family 32 200 8.1E-34 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 BV404_RS05090 011ffbd3e66174da475006fba51bb03f 295 Gene3D G3DSA:1.10.1200.10 217 281 1.9E-7 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain BV404_RS05090 011ffbd3e66174da475006fba51bb03f 295 Gene3D G3DSA:3.40.50.850 1 212 9.9E-58 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 BV404_RS05090 011ffbd3e66174da475006fba51bb03f 295 SUPERFAMILY SSF52499 1 208 7.06E-58 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 BV404_RS05090 011ffbd3e66174da475006fba51bb03f 295 PRINTS PR01398 Isochorismatase signature 183 200 5.2E-47 T 09-03-2017 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 BV404_RS05090 011ffbd3e66174da475006fba51bb03f 295 PRINTS PR01398 Isochorismatase signature 2 14 5.2E-47 T 09-03-2017 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 BV404_RS05090 011ffbd3e66174da475006fba51bb03f 295 PRINTS PR01398 Isochorismatase signature 80 99 5.2E-47 T 09-03-2017 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 BV404_RS05090 011ffbd3e66174da475006fba51bb03f 295 PRINTS PR01398 Isochorismatase signature 63 80 5.2E-47 T 09-03-2017 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 BV404_RS05090 011ffbd3e66174da475006fba51bb03f 295 PRINTS PR01398 Isochorismatase signature 165 183 5.2E-47 T 09-03-2017 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 BV404_RS05090 011ffbd3e66174da475006fba51bb03f 295 PRINTS PR01398 Isochorismatase signature 109 131 5.2E-47 T 09-03-2017 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 BV404_RS05090 011ffbd3e66174da475006fba51bb03f 295 PIRSF PIRSF001111 1 289 1.2E-121 T 09-03-2017 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 BV404_RS07545 e261cc6b24e14fe5e3d4bae1f1f480e2 445 SMART SM00267 259 431 3.9E-57 T 09-03-2017 IPR000160 GGDEF domain BV404_RS07545 e261cc6b24e14fe5e3d4bae1f1f480e2 445 SUPERFAMILY SSF55073 275 429 3.92E-49 T 09-03-2017 IPR029787 Nucleotide cyclase BV404_RS07545 e261cc6b24e14fe5e3d4bae1f1f480e2 445 Pfam PF00990 Diguanylate cyclase, GGDEF domain 272 427 5.3E-48 T 09-03-2017 IPR000160 GGDEF domain BV404_RS07545 e261cc6b24e14fe5e3d4bae1f1f480e2 445 Pfam PF00672 HAMP domain 173 239 4.0E-7 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 BV404_RS07545 e261cc6b24e14fe5e3d4bae1f1f480e2 445 SUPERFAMILY SSF158472 198 241 5.36E-5 T 09-03-2017 BV404_RS07545 e261cc6b24e14fe5e3d4bae1f1f480e2 445 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 268 429 4.7E-45 T 09-03-2017 IPR000160 GGDEF domain BV404_RS07545 e261cc6b24e14fe5e3d4bae1f1f480e2 445 Gene3D G3DSA:3.30.70.270 272 429 4.2E-55 T 09-03-2017 BV404_RS08125 62fac2a027b065150f524367c1af5ecc 185 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3 180 6.8E-54 T 09-03-2017 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668 BV404_RS08125 62fac2a027b065150f524367c1af5ecc 185 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 09-03-2017 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 BV404_RS08125 62fac2a027b065150f524367c1af5ecc 185 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 1.8E-18 T 09-03-2017 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 BV404_RS08125 62fac2a027b065150f524367c1af5ecc 185 PIRSF PIRSF000847 1 185 4.0E-45 T 09-03-2017 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668 BV404_RS11000 577f2ebe5c1b42c8eb15f9326c8e528a 379 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 5 370 4.8E-187 T 09-03-2017 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 BV404_RS11000 577f2ebe5c1b42c8eb15f9326c8e528a 379 Pfam PF01702 Queuine tRNA-ribosyltransferase 128 363 3.2E-96 T 09-03-2017 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 BV404_RS11000 577f2ebe5c1b42c8eb15f9326c8e528a 379 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 5 370 2.3E-178 T 09-03-2017 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 BV404_RS11000 577f2ebe5c1b42c8eb15f9326c8e528a 379 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 3 361 58.325 T 09-03-2017 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 BV404_RS11000 577f2ebe5c1b42c8eb15f9326c8e528a 379 SUPERFAMILY SSF51713 3 366 1.24E-164 T 09-03-2017 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 BV404_RS11000 577f2ebe5c1b42c8eb15f9326c8e528a 379 Gene3D G3DSA:3.20.20.105 2 368 5.1E-172 T 09-03-2017 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 BV404_RS07435 f1153edb1027893c410369fd88742eba 212 Pfam PF01810 LysE type translocator 15 208 1.9E-31 T 09-03-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 BV404_RS07435 f1153edb1027893c410369fd88742eba 212 PIRSF PIRSF006324 1 210 2.6E-53 T 09-03-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 BV404_RS04495 81a223d3f80e331a7c0fc3ce1c85ea3c 214 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 60 88 - T 09-03-2017 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 BV404_RS04495 81a223d3f80e331a7c0fc3ce1c85ea3c 214 SUPERFAMILY SSF53955 33 174 1.37E-38 T 09-03-2017 IPR023346 Lysozyme-like domain BV404_RS04495 81a223d3f80e331a7c0fc3ce1c85ea3c 214 Pfam PF01464 Transglycosylase SLT domain 53 152 5.6E-27 T 09-03-2017 IPR008258 Transglycosylase SLT domain 1 BV404_RS04495 81a223d3f80e331a7c0fc3ce1c85ea3c 214 Gene3D G3DSA:1.10.530.10 38 175 9.8E-42 T 09-03-2017 BV404_RS04615 73ff78ef3ce04a298f9435cc5f60a408 285 Pfam PF01618 MotA/TolQ/ExbB proton channel family 134 238 1.1E-8 T 09-03-2017 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 BV404_RS04615 73ff78ef3ce04a298f9435cc5f60a408 285 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 281 1.6E-113 T 09-03-2017 IPR022522 Flagellar motor stator, MotA BV404_RS04615 73ff78ef3ce04a298f9435cc5f60a408 285 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 09-03-2017 IPR000540 Flagellar motor protein MotA, conserved site BV404_RS08815 847f374d307ca9263e942d2bf7b28f4d 528 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 3.9E-179 T 09-03-2017 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 BV404_RS12090 af50305c9eabbef22988bc869ab9937f 373 Gene3D G3DSA:1.10.150.20 175 289 3.0E-11 T 09-03-2017 BV404_RS12090 af50305c9eabbef22988bc869ab9937f 373 Pfam PF00476 DNA polymerase family A 113 364 1.2E-18 T 09-03-2017 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS12090 af50305c9eabbef22988bc869ab9937f 373 SUPERFAMILY SSF56672 63 353 3.22E-30 T 09-03-2017 BV404_RS12090 af50305c9eabbef22988bc869ab9937f 373 SMART SM00482 156 338 4.9E-6 T 09-03-2017 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS07160 40a73d308246c9c2e74224211f8230f0 325 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 115 323 4.2E-57 T 09-03-2017 IPR004678 Cytochrome c oxidase cbb3-type, subunit III BV404_RS07160 40a73d308246c9c2e74224211f8230f0 325 PRINTS PR00605 Class IC cytochrome C signature 295 317 1.4E-5 T 09-03-2017 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 BV404_RS07160 40a73d308246c9c2e74224211f8230f0 325 PRINTS PR00605 Class IC cytochrome C signature 166 177 1.4E-5 T 09-03-2017 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 BV404_RS07160 40a73d308246c9c2e74224211f8230f0 325 PIRSF PIRSF000006 1 324 3.3E-106 T 09-03-2017 IPR004678 Cytochrome c oxidase cbb3-type, subunit III BV404_RS07160 40a73d308246c9c2e74224211f8230f0 325 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 39 83 1.2E-22 T 09-03-2017 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal BV404_RS07160 40a73d308246c9c2e74224211f8230f0 325 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 156 229 1.7E-14 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 BV404_RS07160 40a73d308246c9c2e74224211f8230f0 325 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 243 317 8.0E-11 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 BV404_RS07160 40a73d308246c9c2e74224211f8230f0 325 Gene3D G3DSA:1.10.760.10 60 82 1.3E-32 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 BV404_RS07160 40a73d308246c9c2e74224211f8230f0 325 Gene3D G3DSA:1.10.760.10 151 246 1.3E-32 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 BV404_RS07160 40a73d308246c9c2e74224211f8230f0 325 SUPERFAMILY SSF46626 241 322 1.0E-21 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 BV404_RS07160 40a73d308246c9c2e74224211f8230f0 325 Gene3D G3DSA:1.10.760.10 247 323 9.3E-25 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 BV404_RS07160 40a73d308246c9c2e74224211f8230f0 325 SUPERFAMILY SSF46626 55 78 3.01E-30 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 BV404_RS07160 40a73d308246c9c2e74224211f8230f0 325 SUPERFAMILY SSF46626 147 239 3.01E-30 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 BV404_RS02220 f5ec3002ed4ffa64e27782c58b758d45 656 Pfam PF01434 Peptidase family M41 386 595 1.5E-81 T 09-03-2017 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 BV404_RS02220 f5ec3002ed4ffa64e27782c58b758d45 656 Gene3D G3DSA:1.10.8.60 336 409 4.4E-27 T 09-03-2017 BV404_RS02220 f5ec3002ed4ffa64e27782c58b758d45 656 SUPERFAMILY SSF140990 406 599 3.14E-75 T 09-03-2017 BV404_RS02220 f5ec3002ed4ffa64e27782c58b758d45 656 Pfam PF06480 FtsH Extracellular 8 96 2.0E-13 T 09-03-2017 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 BV404_RS02220 f5ec3002ed4ffa64e27782c58b758d45 656 SUPERFAMILY SSF52540 147 395 1.26E-70 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS02220 f5ec3002ed4ffa64e27782c58b758d45 656 SMART SM00382 188 327 5.1E-26 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS02220 f5ec3002ed4ffa64e27782c58b758d45 656 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 604 37.294 T 09-03-2017 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 BV404_RS02220 f5ec3002ed4ffa64e27782c58b758d45 656 Gene3D G3DSA:3.40.50.300 148 335 4.0E-64 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS02220 f5ec3002ed4ffa64e27782c58b758d45 656 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 105 597 7.3E-243 T 09-03-2017 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 BV404_RS02220 f5ec3002ed4ffa64e27782c58b758d45 656 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 192 324 4.2E-46 T 09-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 BV404_RS02220 f5ec3002ed4ffa64e27782c58b758d45 656 ProSitePatterns PS00674 AAA-protein family signature. 295 313 - T 09-03-2017 IPR003960 ATPase, AAA-type, conserved site GO:0005524 BV404_RS01880 22632477d792082e4ae713e5f382f91e 195 SUPERFAMILY SSF53474 4 194 2.38E-19 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold BV404_RS01880 22632477d792082e4ae713e5f382f91e 195 Pfam PF05728 Uncharacterised protein family (UPF0227) 8 193 3.6E-75 T 09-03-2017 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA BV404_RS01880 22632477d792082e4ae713e5f382f91e 195 Gene3D G3DSA:3.40.50.1820 6 102 4.5E-20 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold BV404_RS01880 22632477d792082e4ae713e5f382f91e 195 Gene3D G3DSA:3.40.50.1820 134 190 4.5E-20 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold BV404_RS01090 59f7a862afc7404c57cafd6a1ff2ca2b 150 Gene3D G3DSA:3.40.630.30 2 148 4.2E-49 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS01090 59f7a862afc7404c57cafd6a1ff2ca2b 150 SUPERFAMILY SSF55729 1 149 1.19E-34 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS01090 59f7a862afc7404c57cafd6a1ff2ca2b 150 Pfam PF13673 Acetyltransferase (GNAT) domain 41 148 2.4E-15 T 09-03-2017 IPR000182 GNAT domain GO:0008080 BV404_RS13755 da4fe8830137abd13fd496a756e1701d 680 Gene3D G3DSA:1.10.1370.10 140 349 1.1E-140 T 09-03-2017 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 BV404_RS13755 da4fe8830137abd13fd496a756e1701d 680 Gene3D G3DSA:1.10.1370.10 505 678 1.1E-140 T 09-03-2017 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 BV404_RS13755 da4fe8830137abd13fd496a756e1701d 680 Pfam PF01432 Peptidase family M3 222 677 2.1E-163 T 09-03-2017 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 BV404_RS13755 da4fe8830137abd13fd496a756e1701d 680 Gene3D G3DSA:3.40.390.10 360 504 4.4E-59 T 09-03-2017 IPR024079 Metallopeptidase, catalytic domain GO:0008237 BV404_RS13755 da4fe8830137abd13fd496a756e1701d 680 Gene3D G3DSA:1.20.1050.40 9 138 2.2E-28 T 09-03-2017 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal BV404_RS13755 da4fe8830137abd13fd496a756e1701d 680 SUPERFAMILY SSF55486 1 677 5.74E-210 T 09-03-2017 BV404_RS02200 be2775549aed3da1c1735ed947a1b1ae 332 Pfam PF13609 Gram-negative porin 9 296 1.5E-28 T 09-03-2017 BV404_RS02200 be2775549aed3da1c1735ed947a1b1ae 332 SUPERFAMILY SSF56935 23 332 6.2E-55 T 09-03-2017 BV404_RS02200 be2775549aed3da1c1735ed947a1b1ae 332 Gene3D G3DSA:2.40.160.10 23 332 2.8E-59 T 09-03-2017 IPR023614 Porin domain BV404_RS10035 0c5af84f8c591d91fa82ac32d3468f2d 322 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 311 1.1E-135 T 09-03-2017 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 BV404_RS10035 0c5af84f8c591d91fa82ac32d3468f2d 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 299 2.5E-68 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme BV404_RS10035 0c5af84f8c591d91fa82ac32d3468f2d 322 Gene3D G3DSA:3.40.50.1100 133 312 1.2E-73 T 09-03-2017 BV404_RS10035 0c5af84f8c591d91fa82ac32d3468f2d 322 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 311 3.9E-143 T 09-03-2017 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 BV404_RS10035 0c5af84f8c591d91fa82ac32d3468f2d 322 Gene3D G3DSA:3.40.50.1100 36 132 7.0E-38 T 09-03-2017 BV404_RS10035 0c5af84f8c591d91fa82ac32d3468f2d 322 SUPERFAMILY SSF53686 3 313 5.37E-98 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme BV404_RS10035 0c5af84f8c591d91fa82ac32d3468f2d 322 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 09-03-2017 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 BV404_RS13110 32871eb769f7fee8da51a095288c2d95 126 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 72 100 - T 09-03-2017 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BV404_RS13110 32871eb769f7fee8da51a095288c2d95 126 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 72 122 5.6E-17 T 09-03-2017 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 BV404_RS13110 32871eb769f7fee8da51a095288c2d95 126 PRINTS PR01650 Bacterial translocase SecE signature 90 110 3.6E-41 T 09-03-2017 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 BV404_RS13110 32871eb769f7fee8da51a095288c2d95 126 PRINTS PR01650 Bacterial translocase SecE signature 110 126 3.6E-41 T 09-03-2017 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 BV404_RS13110 32871eb769f7fee8da51a095288c2d95 126 PRINTS PR01650 Bacterial translocase SecE signature 45 66 3.6E-41 T 09-03-2017 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 BV404_RS13110 32871eb769f7fee8da51a095288c2d95 126 PRINTS PR01650 Bacterial translocase SecE signature 66 86 3.6E-41 T 09-03-2017 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 BV404_RS13110 32871eb769f7fee8da51a095288c2d95 126 Hamap MF_00422 Protein translocase subunit SecE [secE]. 68 122 13.395 T 09-03-2017 IPR022943 Preprotein translocase subunit SecE Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BV404_RS13110 32871eb769f7fee8da51a095288c2d95 126 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 72 122 2.1E-20 T 09-03-2017 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BV404_RS13110 32871eb769f7fee8da51a095288c2d95 126 Gene3D G3DSA:1.20.5.1030 65 122 1.1E-23 T 09-03-2017 BV404_RS15235 33da3313e208425182ad8cb9e199c8dc 28 Gene3D G3DSA:3.40.50.2300 1 28 2.1E-6 T 09-03-2017 BV404_RS04940 861e2a9f068fc8c630d14f4ae105d309 190 SUPERFAMILY SSF48317 32 170 5.1E-25 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BV404_RS04940 861e2a9f068fc8c630d14f4ae105d309 190 Gene3D G3DSA:1.20.144.10 4 166 3.1E-20 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BV404_RS04940 861e2a9f068fc8c630d14f4ae105d309 190 Pfam PF01569 PAP2 superfamily 57 169 4.8E-13 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BV404_RS04940 861e2a9f068fc8c630d14f4ae105d309 190 SMART SM00014 54 164 4.1E-8 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BV404_RS11960 ce8b19bdf06ba2476f2c4b225d02bb53 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 6 206 6.8E-82 T 09-03-2017 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 BV404_RS11960 ce8b19bdf06ba2476f2c4b225d02bb53 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 39.325 T 09-03-2017 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 BV404_RS11960 ce8b19bdf06ba2476f2c4b225d02bb53 208 SUPERFAMILY SSF53335 12 204 3.94E-46 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS11960 ce8b19bdf06ba2476f2c4b225d02bb53 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 09-03-2017 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 BV404_RS11960 ce8b19bdf06ba2476f2c4b225d02bb53 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 7 204 9.4E-73 T 09-03-2017 BV404_RS11960 ce8b19bdf06ba2476f2c4b225d02bb53 208 Gene3D G3DSA:3.40.50.150 11 204 1.4E-64 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS09780 569417bd6dcebfe19a5d0ec994af86ca 109 Pfam PF00075 RNase H 25 104 9.5E-18 T 09-03-2017 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 BV404_RS09780 569417bd6dcebfe19a5d0ec994af86ca 109 SUPERFAMILY SSF53098 35 105 1.26E-19 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 BV404_RS09780 569417bd6dcebfe19a5d0ec994af86ca 109 Gene3D G3DSA:3.30.420.10 35 106 3.0E-23 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 BV404_RS21380 f5c5ac453e22f06096edd21ae834396c 68 SUPERFAMILY SSF111369 1 67 1.01E-11 T 09-03-2017 BV404_RS21380 f5c5ac453e22f06096edd21ae834396c 68 Gene3D G3DSA:2.40.50.100 19 51 3.7E-8 T 09-03-2017 BV404_RS21380 f5c5ac453e22f06096edd21ae834396c 68 Pfam PF13437 HlyD family secretion protein 21 67 5.8E-5 T 09-03-2017 BV404_RS03340 d46b1d6567eab6ef3f50512e67e0737c 196 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 18 31 - T 09-03-2017 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 BV404_RS03340 d46b1d6567eab6ef3f50512e67e0737c 196 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 191 3.5E-68 T 09-03-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 BV404_RS03340 d46b1d6567eab6ef3f50512e67e0737c 196 Gene3D G3DSA:3.40.50.1470 3 193 1.2E-71 T 09-03-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 BV404_RS03340 d46b1d6567eab6ef3f50512e67e0737c 196 Pfam PF01195 Peptidyl-tRNA hydrolase 7 189 1.1E-53 T 09-03-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 BV404_RS03340 d46b1d6567eab6ef3f50512e67e0737c 196 SUPERFAMILY SSF53178 5 194 1.23E-69 T 09-03-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 BV404_RS03340 d46b1d6567eab6ef3f50512e67e0737c 196 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 112 122 - T 09-03-2017 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 BV404_RS03340 d46b1d6567eab6ef3f50512e67e0737c 196 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 5 184 35.771 T 09-03-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 BV404_RS13165 999b57a62feb1bd8116269749c5acc22 446 Gene3D G3DSA:3.30.870.10 18 182 1.8E-16 T 09-03-2017 BV404_RS13165 999b57a62feb1bd8116269749c5acc22 446 Gene3D G3DSA:3.30.870.10 244 408 5.2E-22 T 09-03-2017 BV404_RS13165 999b57a62feb1bd8116269749c5acc22 446 SUPERFAMILY SSF56024 245 408 1.23E-24 T 09-03-2017 BV404_RS13165 999b57a62feb1bd8116269749c5acc22 446 PIRSF PIRSF000850 1 446 1.1E-223 T 09-03-2017 IPR016270 Phospholipase D, phosphatidylserine synthase type GO:0008654|GO:0016780 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|Reactome: R-HSA-1483148 BV404_RS13165 999b57a62feb1bd8116269749c5acc22 446 Pfam PF13091 PLD-like domain 34 146 7.4E-7 T 09-03-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 BV404_RS13165 999b57a62feb1bd8116269749c5acc22 446 Pfam PF13091 PLD-like domain 251 402 2.0E-26 T 09-03-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 BV404_RS13165 999b57a62feb1bd8116269749c5acc22 446 SUPERFAMILY SSF56024 5 187 9.73E-28 T 09-03-2017 BV404_RS13165 999b57a62feb1bd8116269749c5acc22 446 SMART SM00155 126 152 0.0015 T 09-03-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BV404_RS13165 999b57a62feb1bd8116269749c5acc22 446 SMART SM00155 347 374 9.5E-4 T 09-03-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BV404_RS08765 a0e4bc685b9d28c873f5dec5faa7ddde 260 SUPERFAMILY SSF48452 146 256 1.04E-12 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BV404_RS08765 a0e4bc685b9d28c873f5dec5faa7ddde 260 Pfam PF13174 Tetratricopeptide repeat 217 249 2.5E-7 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 BV404_RS08765 a0e4bc685b9d28c873f5dec5faa7ddde 260 Pfam PF13432 Tetratricopeptide repeat 154 207 1.2E-7 T 09-03-2017 BV404_RS08765 a0e4bc685b9d28c873f5dec5faa7ddde 260 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 143 259 8.8E-38 T 09-03-2017 IPR014162 Tol-Pal system, YbgF BV404_RS08765 a0e4bc685b9d28c873f5dec5faa7ddde 260 Pfam PF16331 TolA binding protein trimerisation 45 118 1.3E-24 T 09-03-2017 IPR032519 YbgF, trimerisation domain GO:0070206 BV404_RS08765 a0e4bc685b9d28c873f5dec5faa7ddde 260 Gene3D G3DSA:1.25.40.10 145 253 3.2E-14 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BV404_RS08765 a0e4bc685b9d28c873f5dec5faa7ddde 260 SMART SM00028 216 249 4.8 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 BV404_RS08765 a0e4bc685b9d28c873f5dec5faa7ddde 260 SMART SM00028 180 213 18.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 BV404_RS10985 ea9edecb75bf724dcec1647fe43f8f63 315 Pfam PF07549 SecD/SecF GG Motif 35 60 8.5E-11 T 09-03-2017 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site BV404_RS10985 ea9edecb75bf724dcec1647fe43f8f63 315 Gene3D G3DSA:1.20.1640.10 125 294 1.6E-26 T 09-03-2017 BV404_RS10985 ea9edecb75bf724dcec1647fe43f8f63 315 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 39 285 9.8E-87 T 09-03-2017 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 BV404_RS10985 ea9edecb75bf724dcec1647fe43f8f63 315 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 117 282 4.7E-56 T 09-03-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BV404_RS10985 ea9edecb75bf724dcec1647fe43f8f63 315 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 11 296 29.172 T 09-03-2017 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 BV404_RS10985 ea9edecb75bf724dcec1647fe43f8f63 315 SUPERFAMILY SSF82866 74 293 4.45E-41 T 09-03-2017 BV404_RS10985 ea9edecb75bf724dcec1647fe43f8f63 315 Pfam PF02355 Protein export membrane protein 112 292 1.9E-70 T 09-03-2017 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial BV404_RS10985 ea9edecb75bf724dcec1647fe43f8f63 315 PRINTS PR01755 Bacterial translocase SecF protein signature 233 248 3.9E-32 T 09-03-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BV404_RS10985 ea9edecb75bf724dcec1647fe43f8f63 315 PRINTS PR01755 Bacterial translocase SecF protein signature 38 53 3.9E-32 T 09-03-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BV404_RS10985 ea9edecb75bf724dcec1647fe43f8f63 315 PRINTS PR01755 Bacterial translocase SecF protein signature 201 219 3.9E-32 T 09-03-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BV404_RS10985 ea9edecb75bf724dcec1647fe43f8f63 315 PRINTS PR01755 Bacterial translocase SecF protein signature 153 167 3.9E-32 T 09-03-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BV404_RS01120 d6126780e2b57249a8b941d8bb8ad326 475 Gene3D G3DSA:3.40.50.300 19 234 1.5E-68 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS01120 d6126780e2b57249a8b941d8bb8ad326 475 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 27 433 2.1E-199 T 09-03-2017 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 BV404_RS01120 d6126780e2b57249a8b941d8bb8ad326 475 Pfam PF00009 Elongation factor Tu GTP binding domain 26 233 5.6E-44 T 09-03-2017 BV404_RS01120 d6126780e2b57249a8b941d8bb8ad326 475 SUPERFAMILY SSF50447 242 324 7.73E-24 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain BV404_RS01120 d6126780e2b57249a8b941d8bb8ad326 475 Gene3D G3DSA:2.40.30.10 243 358 4.2E-20 T 09-03-2017 BV404_RS01120 d6126780e2b57249a8b941d8bb8ad326 475 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 18 474 54.17 T 09-03-2017 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 BV404_RS01120 d6126780e2b57249a8b941d8bb8ad326 475 SUPERFAMILY SSF52540 22 235 3.36E-58 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS01120 d6126780e2b57249a8b941d8bb8ad326 475 PRINTS PR00315 GTP-binding elongation factor signature 125 136 6.8E-13 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BV404_RS01120 d6126780e2b57249a8b941d8bb8ad326 475 PRINTS PR00315 GTP-binding elongation factor signature 162 171 6.8E-13 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BV404_RS01120 d6126780e2b57249a8b941d8bb8ad326 475 PRINTS PR00315 GTP-binding elongation factor signature 89 97 6.8E-13 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BV404_RS01120 d6126780e2b57249a8b941d8bb8ad326 475 PRINTS PR00315 GTP-binding elongation factor signature 28 41 6.8E-13 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BV404_RS01120 d6126780e2b57249a8b941d8bb8ad326 475 PRINTS PR00315 GTP-binding elongation factor signature 109 119 6.8E-13 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BV404_RS01120 d6126780e2b57249a8b941d8bb8ad326 475 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 82 97 - T 09-03-2017 IPR031157 Tr-type G domain, conserved site BV404_RS01120 d6126780e2b57249a8b941d8bb8ad326 475 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 33 211 3.3E-12 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 BV404_RS01120 d6126780e2b57249a8b941d8bb8ad326 475 SUPERFAMILY SSF50465 332 434 1.53E-28 T 09-03-2017 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal BV404_RS05960 ff0087fa6d796328147b8b401dbe63bd 295 Gene3D G3DSA:1.10.3720.10 87 291 1.2E-23 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS05960 ff0087fa6d796328147b8b401dbe63bd 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 292 4.7E-21 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS05960 ff0087fa6d796328147b8b401dbe63bd 295 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 65 2.5E-10 T 09-03-2017 IPR025966 Oligopeptide transport permease C-like, N-terminal domain BV404_RS05960 ff0087fa6d796328147b8b401dbe63bd 295 SUPERFAMILY SSF161098 89 276 4.06E-25 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS05580 104f58db11a2b66af5cb38a626813015 139 SUPERFAMILY SSF54427 4 131 6.47E-26 T 09-03-2017 IPR032710 NTF2-like domain BV404_RS05580 104f58db11a2b66af5cb38a626813015 139 Pfam PF12680 SnoaL-like domain 6 108 2.0E-16 T 09-03-2017 IPR009959 Polyketide cyclase SnoaL-like domain BV404_RS05580 104f58db11a2b66af5cb38a626813015 139 Gene3D G3DSA:3.10.450.50 4 134 3.3E-25 T 09-03-2017 IPR032710 NTF2-like domain BV404_RS12340 d5cb2fef847e2143eaa6464ed12b4e63 354 SMART SM00525 189 209 0.0013 T 09-03-2017 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 BV404_RS12340 d5cb2fef847e2143eaa6464ed12b4e63 354 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 4 264 1.6E-124 T 09-03-2017 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 BV404_RS12340 d5cb2fef847e2143eaa6464ed12b4e63 354 Gene3D G3DSA:3.90.79.10 227 345 1.0E-19 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 BV404_RS12340 d5cb2fef847e2143eaa6464ed12b4e63 354 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 164 2.4E-21 T 09-03-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 BV404_RS12340 d5cb2fef847e2143eaa6464ed12b4e63 354 Gene3D G3DSA:1.10.1670.10 120 222 8.1E-39 T 09-03-2017 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 BV404_RS12340 d5cb2fef847e2143eaa6464ed12b4e63 354 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 190 206 - T 09-03-2017 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 BV404_RS12340 d5cb2fef847e2143eaa6464ed12b4e63 354 SUPERFAMILY SSF55811 218 345 1.18E-24 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 BV404_RS12340 d5cb2fef847e2143eaa6464ed12b4e63 354 Pfam PF14815 NUDIX domain 231 343 3.0E-22 T 09-03-2017 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 BV404_RS12340 d5cb2fef847e2143eaa6464ed12b4e63 354 Gene3D G3DSA:1.10.340.30 20 119 2.3E-45 T 09-03-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 BV404_RS12340 d5cb2fef847e2143eaa6464ed12b4e63 354 Pfam PF00633 Helix-hairpin-helix motif 98 125 5.2E-7 T 09-03-2017 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 BV404_RS12340 d5cb2fef847e2143eaa6464ed12b4e63 354 SMART SM00478 37 188 1.4E-46 T 09-03-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 BV404_RS12340 d5cb2fef847e2143eaa6464ed12b4e63 354 SUPERFAMILY SSF48150 3 223 2.51E-76 T 09-03-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 BV404_RS03700 bf21a006acd7e1be66c665216b2acfca 403 Gene3D G3DSA:3.40.47.10 261 402 2.4E-50 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 BV404_RS03700 bf21a006acd7e1be66c665216b2acfca 403 Gene3D G3DSA:3.40.47.10 6 257 2.9E-63 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 BV404_RS03700 bf21a006acd7e1be66c665216b2acfca 403 SMART SM00825 Beta-ketoacyl synthase 4 403 3.0E-14 T 09-03-2017 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BV404_RS03700 bf21a006acd7e1be66c665216b2acfca 403 SUPERFAMILY SSF53901 213 401 5.26E-62 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 BV404_RS03700 bf21a006acd7e1be66c665216b2acfca 403 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 09-03-2017 IPR018201 Beta-ketoacyl synthase, active site BV404_RS03700 bf21a006acd7e1be66c665216b2acfca 403 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 1.8E-45 T 09-03-2017 IPR014030 Beta-ketoacyl synthase, N-terminal BV404_RS03700 bf21a006acd7e1be66c665216b2acfca 403 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 358 3.8E-28 T 09-03-2017 IPR014031 Beta-ketoacyl synthase, C-terminal BV404_RS03700 bf21a006acd7e1be66c665216b2acfca 403 SUPERFAMILY SSF53901 1 251 8.65E-68 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 BV404_RS12290 da9cf7b1dc700ad3147d9492f6a928b7 235 SUPERFAMILY SSF51419 1 228 4.71E-83 T 09-03-2017 IPR029066 PLP-binding barrel BV404_RS12290 da9cf7b1dc700ad3147d9492f6a928b7 235 Pfam PF01168 Alanine racemase, N-terminal domain 7 230 2.8E-32 T 09-03-2017 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BV404_RS12290 da9cf7b1dc700ad3147d9492f6a928b7 235 Gene3D G3DSA:3.20.20.10 1 234 1.1E-93 T 09-03-2017 IPR029066 PLP-binding barrel BV404_RS12290 da9cf7b1dc700ad3147d9492f6a928b7 235 PIRSF PIRSF004848 1 235 5.6E-77 T 09-03-2017 IPR011078 Uncharacterised protein family UPF0001 BV404_RS12290 da9cf7b1dc700ad3147d9492f6a928b7 235 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 80 94 - T 09-03-2017 IPR011078 Uncharacterised protein family UPF0001 BV404_RS12290 da9cf7b1dc700ad3147d9492f6a928b7 235 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 230 4.3E-84 T 09-03-2017 IPR011078 Uncharacterised protein family UPF0001 BV404_RS01315 6c40776a677c71ca84086827a7182763 219 Gene3D G3DSA:1.10.10.640 180 210 2.1E-9 T 09-03-2017 IPR023094 Toluene tolerance protein, alpha-helical BV404_RS01315 6c40776a677c71ca84086827a7182763 219 Gene3D G3DSA:1.10.10.640 85 119 2.1E-9 T 09-03-2017 IPR023094 Toluene tolerance protein, alpha-helical BV404_RS01315 6c40776a677c71ca84086827a7182763 219 PIRSF PIRSF004649 5 218 5.2E-56 T 09-03-2017 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC BV404_RS01315 6c40776a677c71ca84086827a7182763 219 Gene3D G3DSA:3.10.450.50 122 179 3.3E-18 T 09-03-2017 IPR032710 NTF2-like domain BV404_RS01315 6c40776a677c71ca84086827a7182763 219 Gene3D G3DSA:3.10.450.50 34 78 3.3E-18 T 09-03-2017 IPR032710 NTF2-like domain BV404_RS01315 6c40776a677c71ca84086827a7182763 219 Pfam PF05494 MlaC protein 40 205 9.3E-48 T 09-03-2017 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC BV404_RS14760 17240b002180c453e4d171a39f1f2a8d 109 Pfam PF10694 Protein of unknown function (DUF2500) 4 105 7.2E-23 T 09-03-2017 IPR019635 Protein of unknown function DUF2500 BV404_RS04955 02f941c6848c4bd93afe003518f881aa 651 Pfam PF00884 Sulfatase 293 563 1.3E-43 T 09-03-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 BV404_RS04955 02f941c6848c4bd93afe003518f881aa 651 PIRSF PIRSF005091 12 638 6.1E-97 T 09-03-2017 IPR012160 Lipoteichoic acid synthase-like BV404_RS04955 02f941c6848c4bd93afe003518f881aa 651 Gene3D G3DSA:3.40.720.10 293 579 4.7E-41 T 09-03-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 BV404_RS04955 02f941c6848c4bd93afe003518f881aa 651 SUPERFAMILY SSF53649 291 593 2.36E-65 T 09-03-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 BV404_RS01860 8438a5232f558bae72c5a0d573b95030 438 SUPERFAMILY SSF56954 1 426 8.11E-93 T 09-03-2017 BV404_RS01860 8438a5232f558bae72c5a0d573b95030 438 Pfam PF02321 Outer membrane efflux protein 25 207 3.7E-30 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 BV404_RS01860 8438a5232f558bae72c5a0d573b95030 438 Pfam PF02321 Outer membrane efflux protein 231 420 5.1E-32 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 BV404_RS01860 8438a5232f558bae72c5a0d573b95030 438 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 22 434 1.2E-110 T 09-03-2017 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 BV404_RS01860 8438a5232f558bae72c5a0d573b95030 438 Gene3D G3DSA:1.20.1600.10 19 427 4.4E-82 T 09-03-2017 BV404_RS14625 20a7e71e5d5396a8f737250aafcd2e12 462 SMART SM00729 57 277 3.0E-54 T 09-03-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 BV404_RS14625 20a7e71e5d5396a8f737250aafcd2e12 462 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 13 462 1.3E-206 T 09-03-2017 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22 BV404_RS14625 20a7e71e5d5396a8f737250aafcd2e12 462 SUPERFAMILY SSF102114 11 449 3.4E-144 T 09-03-2017 BV404_RS14625 20a7e71e5d5396a8f737250aafcd2e12 462 PIRSF PIRSF000167 8 459 2.5E-172 T 09-03-2017 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22 BV404_RS14625 20a7e71e5d5396a8f737250aafcd2e12 462 Gene3D G3DSA:3.80.30.20 58 289 8.4E-32 T 09-03-2017 IPR023404 Radical SAM, alpha/beta horseshoe BV404_RS14625 20a7e71e5d5396a8f737250aafcd2e12 462 Pfam PF06969 HemN C-terminal domain 368 436 2.5E-11 T 09-03-2017 IPR010723 HemN, C-terminal BV404_RS14625 20a7e71e5d5396a8f737250aafcd2e12 462 Pfam PF04055 Radical SAM superfamily 62 231 1.3E-17 T 09-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 BV404_RS06845 aab740549a34392235a801154de32a7d 280 Gene3D G3DSA:1.10.3720.10 5 269 4.3E-43 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS06845 aab740549a34392235a801154de32a7d 280 SUPERFAMILY SSF161098 8 277 5.34E-51 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS06845 aab740549a34392235a801154de32a7d 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 275 3.1E-14 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS07455 21abf03f7b2531fe3114eddb6881eb3f 683 Gene3D G3DSA:2.40.50.230 375 456 2.2E-39 T 09-03-2017 IPR006531 Gp5 N-terminal BV404_RS07455 21abf03f7b2531fe3114eddb6881eb3f 683 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 10 526 1.8E-184 T 09-03-2017 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset BV404_RS07455 21abf03f7b2531fe3114eddb6881eb3f 683 SUPERFAMILY SSF69279 8 190 1.64E-49 T 09-03-2017 BV404_RS07455 21abf03f7b2531fe3114eddb6881eb3f 683 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 35 508 3.5E-132 T 09-03-2017 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein BV404_RS07455 21abf03f7b2531fe3114eddb6881eb3f 683 Pfam PF05954 Phage late control gene D protein (GPD) 37 334 1.3E-77 T 09-03-2017 BV404_RS07455 21abf03f7b2531fe3114eddb6881eb3f 683 Gene3D G3DSA:3.55.50.10 104 196 1.7E-33 T 09-03-2017 BV404_RS07455 21abf03f7b2531fe3114eddb6881eb3f 683 SUPERFAMILY SSF69279 196 370 3.91E-44 T 09-03-2017 BV404_RS07455 21abf03f7b2531fe3114eddb6881eb3f 683 SUPERFAMILY SSF69255 369 456 1.75E-32 T 09-03-2017 BV404_RS07455 21abf03f7b2531fe3114eddb6881eb3f 683 SUPERFAMILY SSF69349 447 628 3.37E-46 T 09-03-2017 BV404_RS06850 e45dac3bb162ff452b8cbc37ed5fb675 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 129 292 3.8E-12 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS06850 e45dac3bb162ff452b8cbc37ed5fb675 293 SUPERFAMILY SSF161098 55 282 3.14E-40 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS06850 e45dac3bb162ff452b8cbc37ed5fb675 293 Gene3D G3DSA:1.10.3720.10 61 290 2.9E-40 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS13075 0a561870896e8056fb4cad3390f5366e 1400 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1366 0.0 T 09-03-2017 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BV404_RS13075 0a561870896e8056fb4cad3390f5366e 1400 Gene3D G3DSA:2.40.40.20 417 489 2.5E-37 T 09-03-2017 BV404_RS13075 0a561870896e8056fb4cad3390f5366e 1400 Gene3D G3DSA:2.40.40.20 349 376 2.5E-37 T 09-03-2017 BV404_RS13075 0a561870896e8056fb4cad3390f5366e 1400 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 1.0E-27 T 09-03-2017 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BV404_RS13075 0a561870896e8056fb4cad3390f5366e 1400 SMART SM00663 235 514 1.1E-184 T 09-03-2017 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BV404_RS13075 0a561870896e8056fb4cad3390f5366e 1400 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 3.9E-19 T 09-03-2017 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BV404_RS13075 0a561870896e8056fb4cad3390f5366e 1400 Gene3D G3DSA:2.40.50.100 1156 1209 6.0E-8 T 09-03-2017 BV404_RS13075 0a561870896e8056fb4cad3390f5366e 1400 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1314 3.1E-77 T 09-03-2017 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BV404_RS13075 0a561870896e8056fb4cad3390f5366e 1400 Hamap MF_01323 DNA-directed RNA polymerase subunit gamma [rpoC1]. 13 742 32.377 T 09-03-2017 BV404_RS13075 0a561870896e8056fb4cad3390f5366e 1400 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 2.4E-87 T 09-03-2017 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BV404_RS13075 0a561870896e8056fb4cad3390f5366e 1400 SUPERFAMILY SSF64484 1133 1363 0.0 T 09-03-2017 BV404_RS13075 0a561870896e8056fb4cad3390f5366e 1400 SUPERFAMILY SSF64484 16 944 0.0 T 09-03-2017 BV404_RS13075 0a561870896e8056fb4cad3390f5366e 1400 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 15 1375 10.456 T 09-03-2017 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BV404_RS13075 0a561870896e8056fb4cad3390f5366e 1400 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 485 1.9E-27 T 09-03-2017 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BV404_RS13075 0a561870896e8056fb4cad3390f5366e 1400 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 395 4.4E-8 T 09-03-2017 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BV404_RS08040 9d807f11f39ae1c4a03469a3d98236fd 437 Pfam PF00175 Oxidoreductase NAD-binding domain 319 410 5.3E-5 T 09-03-2017 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 BV404_RS08040 9d807f11f39ae1c4a03469a3d98236fd 437 SUPERFAMILY SSF52343 308 435 6.29E-23 T 09-03-2017 BV404_RS08040 9d807f11f39ae1c4a03469a3d98236fd 437 SUPERFAMILY SSF63380 229 308 1.4E-12 T 09-03-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 BV404_RS08040 9d807f11f39ae1c4a03469a3d98236fd 437 Pfam PF08022 FAD-binding domain 230 305 1.6E-4 T 09-03-2017 IPR013112 FAD-binding 8 GO:0016491|GO:0055114 BV404_RS08040 9d807f11f39ae1c4a03469a3d98236fd 437 Gene3D G3DSA:3.40.50.80 309 434 1.4E-17 T 09-03-2017 BV404_RS08040 9d807f11f39ae1c4a03469a3d98236fd 437 Pfam PF01794 Ferric reductase like transmembrane component 37 165 8.5E-12 T 09-03-2017 IPR013130 Ferric reductase transmembrane component-like domain BV404_RS08040 9d807f11f39ae1c4a03469a3d98236fd 437 Gene3D G3DSA:2.40.30.10 212 308 4.8E-13 T 09-03-2017 BV404_RS12820 79c56c4ee9b109b1b9010f8e9dac05ca 469 Gene3D G3DSA:3.40.50.300 198 461 4.1E-105 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS12820 79c56c4ee9b109b1b9010f8e9dac05ca 469 SUPERFAMILY SSF52540 201 272 1.7E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS12820 79c56c4ee9b109b1b9010f8e9dac05ca 469 SUPERFAMILY SSF52540 299 452 1.7E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS12820 79c56c4ee9b109b1b9010f8e9dac05ca 469 Gene3D G3DSA:1.10.860.10 24 126 3.4E-37 T 09-03-2017 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal BV404_RS12820 79c56c4ee9b109b1b9010f8e9dac05ca 469 Pfam PF03796 DnaB-like helicase C terminal domain 203 459 4.3E-115 T 09-03-2017 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 BV404_RS12820 79c56c4ee9b109b1b9010f8e9dac05ca 469 Pfam PF00772 DnaB-like helicase N terminal domain 24 125 1.6E-34 T 09-03-2017 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 BV404_RS12820 79c56c4ee9b109b1b9010f8e9dac05ca 469 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 24 461 3.1E-174 T 09-03-2017 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 BV404_RS12820 79c56c4ee9b109b1b9010f8e9dac05ca 469 SUPERFAMILY SSF48024 22 133 4.58E-37 T 09-03-2017 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 BV404_RS05325 512ed76cb543b179604efdfe38f51a05 210 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 43 197 4.0E-9 T 09-03-2017 IPR004564 Outer membrane lipoprotein carrier protein LolA-like BV404_RS05325 512ed76cb543b179604efdfe38f51a05 210 SUPERFAMILY SSF89392 31 196 7.06E-17 T 09-03-2017 IPR029046 Lipoprotein localisation LolA/LolB/LppX BV404_RS05325 512ed76cb543b179604efdfe38f51a05 210 Gene3D G3DSA:2.50.20.10 31 198 7.4E-13 T 09-03-2017 BV404_RS06400 9267110dbe3aad7d368ed8df67514ff0 235 Pfam PF13489 Methyltransferase domain 52 194 1.3E-25 T 09-03-2017 BV404_RS06400 9267110dbe3aad7d368ed8df67514ff0 235 Gene3D G3DSA:3.40.50.150 23 220 6.3E-48 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS06400 9267110dbe3aad7d368ed8df67514ff0 235 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 11 229 3.0E-88 T 09-03-2017 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 BV404_RS06400 9267110dbe3aad7d368ed8df67514ff0 235 SUPERFAMILY SSF53335 15 232 2.43E-45 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS06400 9267110dbe3aad7d368ed8df67514ff0 235 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 9 235 38.628 T 09-03-2017 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 BV404_RS10925 265f44f936403667f8b48e3733a5d3da 430 PIRSF PIRSF036388 1 430 7.9E-227 T 09-03-2017 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 BV404_RS10925 265f44f936403667f8b48e3733a5d3da 430 Gene3D G3DSA:3.40.630.10 95 428 1.9E-116 T 09-03-2017 BV404_RS10925 265f44f936403667f8b48e3733a5d3da 430 Hamap MF_00504 Peptidase B [pepB]. 3 427 65.09 T 09-03-2017 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 BV404_RS10925 265f44f936403667f8b48e3733a5d3da 430 SUPERFAMILY SSF53187 104 427 1.98E-101 T 09-03-2017 BV404_RS10925 265f44f936403667f8b48e3733a5d3da 430 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 109 421 4.4E-99 T 09-03-2017 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 BV404_RS10925 265f44f936403667f8b48e3733a5d3da 430 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 275 282 - T 09-03-2017 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 BV404_RS10925 265f44f936403667f8b48e3733a5d3da 430 PRINTS PR00481 Cytosol aminopeptidase signature 190 207 1.4E-45 T 09-03-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BV404_RS10925 265f44f936403667f8b48e3733a5d3da 430 PRINTS PR00481 Cytosol aminopeptidase signature 212 233 1.4E-45 T 09-03-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BV404_RS10925 265f44f936403667f8b48e3733a5d3da 430 PRINTS PR00481 Cytosol aminopeptidase signature 271 291 1.4E-45 T 09-03-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BV404_RS10925 265f44f936403667f8b48e3733a5d3da 430 PRINTS PR00481 Cytosol aminopeptidase signature 299 314 1.4E-45 T 09-03-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BV404_RS10925 265f44f936403667f8b48e3733a5d3da 430 PRINTS PR00481 Cytosol aminopeptidase signature 249 270 1.4E-45 T 09-03-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BV404_RS10925 265f44f936403667f8b48e3733a5d3da 430 Pfam PF12404 Peptidase 5 81 4.5E-32 T 09-03-2017 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 BV404_RS13465 385b839ac2e6c82aa89978a316070382 272 PRINTS PR00164 ABC-2 type transport system membrane protein signature 41 62 5.7E-12 T 09-03-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 BV404_RS13465 385b839ac2e6c82aa89978a316070382 272 PRINTS PR00164 ABC-2 type transport system membrane protein signature 210 229 5.7E-12 T 09-03-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 BV404_RS13465 385b839ac2e6c82aa89978a316070382 272 PRINTS PR00164 ABC-2 type transport system membrane protein signature 190 209 5.7E-12 T 09-03-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 BV404_RS13465 385b839ac2e6c82aa89978a316070382 272 PRINTS PR00164 ABC-2 type transport system membrane protein signature 153 177 5.7E-12 T 09-03-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 BV404_RS13465 385b839ac2e6c82aa89978a316070382 272 PIRSF PIRSF006648 3 266 1.3E-17 T 09-03-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 BV404_RS13465 385b839ac2e6c82aa89978a316070382 272 Pfam PF01061 ABC-2 type transporter 22 233 2.0E-31 T 09-03-2017 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 BV404_RS13245 5c104daaa1653a4372aabd15c77cfabf 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 09-03-2017 IPR017937 Thioredoxin, conserved site GO:0045454 BV404_RS13245 5c104daaa1653a4372aabd15c77cfabf 108 PRINTS PR00421 Thioredoxin family signature 24 32 3.3E-10 T 09-03-2017 BV404_RS13245 5c104daaa1653a4372aabd15c77cfabf 108 PRINTS PR00421 Thioredoxin family signature 72 83 3.3E-10 T 09-03-2017 BV404_RS13245 5c104daaa1653a4372aabd15c77cfabf 108 PRINTS PR00421 Thioredoxin family signature 32 41 3.3E-10 T 09-03-2017 BV404_RS13245 5c104daaa1653a4372aabd15c77cfabf 108 PIRSF PIRSF000077 2 108 2.4E-42 T 09-03-2017 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 BV404_RS13245 5c104daaa1653a4372aabd15c77cfabf 108 SUPERFAMILY SSF52833 3 107 2.21E-37 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS13245 5c104daaa1653a4372aabd15c77cfabf 108 Gene3D G3DSA:3.40.30.10 2 107 2.4E-39 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS13245 5c104daaa1653a4372aabd15c77cfabf 108 Pfam PF00085 Thioredoxin 5 106 1.8E-32 T 09-03-2017 IPR013766 Thioredoxin domain GO:0045454 BV404_RS13245 5c104daaa1653a4372aabd15c77cfabf 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 3.6E-37 T 09-03-2017 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 BV404_RS09995 da0c7a7433653e2d38a749f669a1846a 309 SMART SM00244 22 180 2.9E-59 T 09-03-2017 IPR001107 Band 7 domain BV404_RS09995 da0c7a7433653e2d38a749f669a1846a 309 Pfam PF01145 SPFH domain / Band 7 family 26 207 3.4E-35 T 09-03-2017 IPR001107 Band 7 domain BV404_RS09995 da0c7a7433653e2d38a749f669a1846a 309 ProSitePatterns PS01270 Band 7 protein family signature. 136 164 - T 09-03-2017 IPR018080 Band 7/stomatin-like, conserved site BV404_RS09995 da0c7a7433653e2d38a749f669a1846a 309 Pfam PF16200 C-terminal region of band_7 241 301 2.9E-7 T 09-03-2017 IPR032435 Band 7, C-terminal extension BV404_RS09995 da0c7a7433653e2d38a749f669a1846a 309 SUPERFAMILY SSF117892 53 187 6.8E-42 T 09-03-2017 IPR001107 Band 7 domain BV404_RS09995 da0c7a7433653e2d38a749f669a1846a 309 PRINTS PR00721 Stomatin signature 175 196 6.5E-30 T 09-03-2017 IPR001972 Stomatin family GO:0016020 BV404_RS09995 da0c7a7433653e2d38a749f669a1846a 309 PRINTS PR00721 Stomatin signature 156 174 6.5E-30 T 09-03-2017 IPR001972 Stomatin family GO:0016020 BV404_RS09995 da0c7a7433653e2d38a749f669a1846a 309 PRINTS PR00721 Stomatin signature 77 98 6.5E-30 T 09-03-2017 IPR001972 Stomatin family GO:0016020 BV404_RS09995 da0c7a7433653e2d38a749f669a1846a 309 PRINTS PR00721 Stomatin signature 132 155 6.5E-30 T 09-03-2017 IPR001972 Stomatin family GO:0016020 BV404_RS09995 da0c7a7433653e2d38a749f669a1846a 309 PRINTS PR00721 Stomatin signature 112 129 6.5E-30 T 09-03-2017 IPR001972 Stomatin family GO:0016020 BV404_RS04360 8730dcc90b855a8176354753401f1c9a 247 SUPERFAMILY SSF51735 9 242 1.08E-63 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS04360 8730dcc90b855a8176354753401f1c9a 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BV404_RS04360 8730dcc90b855a8176354753401f1c9a 247 Gene3D G3DSA:3.40.50.720 8 243 2.3E-68 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS04360 8730dcc90b855a8176354753401f1c9a 247 Pfam PF00106 short chain dehydrogenase 13 209 1.1E-51 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS04360 8730dcc90b855a8176354753401f1c9a 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 1.0E-21 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS04360 8730dcc90b855a8176354753401f1c9a 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 1.0E-21 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS04360 8730dcc90b855a8176354753401f1c9a 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 1.0E-21 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS04360 8730dcc90b855a8176354753401f1c9a 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 1.0E-21 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS04360 8730dcc90b855a8176354753401f1c9a 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 1.0E-21 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS01155 0fe3e26f14f0dabd4edd314e6d7ae61e 217 Pfam PF10986 Protein of unknown function (DUF2796) 128 213 4.7E-17 T 09-03-2017 IPR021253 Protein of unknown function DUF2796 BV404_RS01155 0fe3e26f14f0dabd4edd314e6d7ae61e 217 Pfam PF10986 Protein of unknown function (DUF2796) 29 142 1.5E-31 T 09-03-2017 IPR021253 Protein of unknown function DUF2796 BV404_RS04905 4d231e91d64b373f0795e51296542115 117 SUPERFAMILY SSF50249 9 115 3.18E-25 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS04905 4d231e91d64b373f0795e51296542115 117 Gene3D G3DSA:2.40.50.140 7 115 2.5E-31 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS04905 4d231e91d64b373f0795e51296542115 117 Pfam PF01588 Putative tRNA binding domain 20 95 3.8E-17 T 09-03-2017 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 BV404_RS05775 aedf73bc4e0ea5bfd9517196cf07ab1b 107 Pfam PF09413 Putative prokaryotic signal transducing protein 2 69 1.5E-9 T 09-03-2017 IPR018551 Domain of unknown function DUF2007 BV404_RS05775 aedf73bc4e0ea5bfd9517196cf07ab1b 107 ProSitePatterns PS01358 Zinc finger RanBP2-type signature. 80 99 - T 09-03-2017 IPR001876 Zinc finger, RanBP2-type GO:0008270 BV404_RS09350 079c312a76336cbfae1002d2c92b0ecf 344 PIRSF PIRSF002825 3 341 6.1E-65 T 09-03-2017 IPR026045 Ferric binding protein BV404_RS09350 079c312a76336cbfae1002d2c92b0ecf 344 Gene3D G3DSA:3.40.190.10 8 124 9.7E-34 T 09-03-2017 BV404_RS09350 079c312a76336cbfae1002d2c92b0ecf 344 Gene3D G3DSA:3.40.190.10 270 320 9.7E-34 T 09-03-2017 BV404_RS09350 079c312a76336cbfae1002d2c92b0ecf 344 Gene3D G3DSA:3.40.190.10 130 269 5.8E-47 T 09-03-2017 BV404_RS09350 079c312a76336cbfae1002d2c92b0ecf 344 SUPERFAMILY SSF53850 25 333 1.33E-66 T 09-03-2017 BV404_RS09350 079c312a76336cbfae1002d2c92b0ecf 344 Pfam PF13343 Bacterial extracellular solute-binding protein 90 316 3.5E-30 T 09-03-2017 BV404_RS11150 c36850f5b1499926a2a8d579c51f787a 145 SUPERFAMILY SSF82649 4 141 4.5E-48 T 09-03-2017 BV404_RS11150 c36850f5b1499926a2a8d579c51f787a 145 Pfam PF02657 Fe-S metabolism associated domain 21 139 6.4E-45 T 09-03-2017 IPR003808 Fe-S metabolism associated domain, SufE-like BV404_RS11150 c36850f5b1499926a2a8d579c51f787a 145 Gene3D G3DSA:3.90.1010.10 6 142 2.3E-52 T 09-03-2017 BV404_RS11150 c36850f5b1499926a2a8d579c51f787a 145 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 6 140 5.2E-45 T 09-03-2017 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE BV404_RS04090 e02e5f13bb3bcb5fb976f17dcc4273d6 117 Pfam PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit 27 112 1.3E-36 T 09-03-2017 IPR011986 Extradiol ring-cleavage dioxygenase LigAB, LigA subunit BV404_RS04090 e02e5f13bb3bcb5fb976f17dcc4273d6 117 Gene3D G3DSA:1.10.700.10 5 117 1.8E-46 T 09-03-2017 IPR011986 Extradiol ring-cleavage dioxygenase LigAB, LigA subunit BV404_RS04090 e02e5f13bb3bcb5fb976f17dcc4273d6 117 SUPERFAMILY SSF48076 7 117 5.23E-41 T 09-03-2017 IPR011986 Extradiol ring-cleavage dioxygenase LigAB, LigA subunit BV404_RS10200 d172588cbc633c67a0966e4b0ccd9a45 359 Pfam PF00953 Glycosyl transferase family 4 71 227 2.1E-31 T 09-03-2017 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 BV404_RS10200 d172588cbc633c67a0966e4b0ccd9a45 359 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 4 348 26.983 T 09-03-2017 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530 BV404_RS10200 d172588cbc633c67a0966e4b0ccd9a45 359 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 3 345 1.9E-153 T 09-03-2017 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530 BV404_RS14845 c5fb599f76e52f9614bddc574545281c 120 Pfam PF01219 Prokaryotic diacylglycerol kinase 17 115 5.8E-37 T 09-03-2017 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 BV404_RS14845 c5fb599f76e52f9614bddc574545281c 120 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 71 82 - T 09-03-2017 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 BV404_RS14845 c5fb599f76e52f9614bddc574545281c 120 Gene3D G3DSA:1.10.3830.10 4 118 9.3E-46 T 09-03-2017 BV404_RS01985 94401ddfd0dc5cadf36d5f7de609f844 175 SUPERFAMILY SSF53271 3 174 6.56E-54 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like BV404_RS01985 94401ddfd0dc5cadf36d5f7de609f844 175 Pfam PF00156 Phosphoribosyl transferase domain 12 159 1.0E-25 T 09-03-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 BV404_RS01985 94401ddfd0dc5cadf36d5f7de609f844 175 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 172 1.2E-72 T 09-03-2017 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 BV404_RS01985 94401ddfd0dc5cadf36d5f7de609f844 175 Gene3D G3DSA:3.40.50.2020 2 173 1.3E-77 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like BV404_RS14065 17b751bcd9c97c96cba85b818b8170af 510 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 25 311 1.4E-81 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme BV404_RS14065 17b751bcd9c97c96cba85b818b8170af 510 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 48 61 - T 09-03-2017 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 BV404_RS14065 17b751bcd9c97c96cba85b818b8170af 510 Gene3D G3DSA:3.40.50.1100 76 329 4.9E-81 T 09-03-2017 BV404_RS14065 17b751bcd9c97c96cba85b818b8170af 510 SUPERFAMILY SSF55021 332 418 2.44E-27 T 09-03-2017 BV404_RS14065 17b751bcd9c97c96cba85b818b8170af 510 Gene3D G3DSA:3.40.1020.10 335 508 8.5E-56 T 09-03-2017 BV404_RS14065 17b751bcd9c97c96cba85b818b8170af 510 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 10 508 1.0E-252 T 09-03-2017 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 BV404_RS14065 17b751bcd9c97c96cba85b818b8170af 510 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 324 414 1.1E-24 T 09-03-2017 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 BV404_RS14065 17b751bcd9c97c96cba85b818b8170af 510 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 420 508 1.8E-26 T 09-03-2017 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 BV404_RS14065 17b751bcd9c97c96cba85b818b8170af 510 SUPERFAMILY SSF53686 10 360 1.07E-105 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme BV404_RS14065 17b751bcd9c97c96cba85b818b8170af 510 SUPERFAMILY SSF55021 415 508 6.18E-27 T 09-03-2017 BV404_RS02905 d595f9200716f4e42a96838700ea6de6 185 SUPERFAMILY SSF55194 2 184 1.23E-72 T 09-03-2017 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 BV404_RS02905 d595f9200716f4e42a96838700ea6de6 185 Pfam PF01765 Ribosome recycling factor 20 183 2.4E-63 T 09-03-2017 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 BV404_RS02905 d595f9200716f4e42a96838700ea6de6 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.654 T 09-03-2017 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 BV404_RS02905 d595f9200716f4e42a96838700ea6de6 185 Gene3D G3DSA:1.10.132.20 67 185 2.2E-45 T 09-03-2017 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 BV404_RS02905 d595f9200716f4e42a96838700ea6de6 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 8.1E-77 T 09-03-2017 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 BV404_RS00855 12d4a18fe8149a9f20436685c65ddcec 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 2.8E-70 T 09-03-2017 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 BV404_RS00855 12d4a18fe8149a9f20436685c65ddcec 289 SUPERFAMILY SSF52540 4 286 4.99E-47 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS00855 12d4a18fe8149a9f20436685c65ddcec 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 8.1E-28 T 09-03-2017 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 BV404_RS00855 12d4a18fe8149a9f20436685c65ddcec 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 8.1E-28 T 09-03-2017 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 BV404_RS00855 12d4a18fe8149a9f20436685c65ddcec 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 8.1E-28 T 09-03-2017 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 BV404_RS00855 12d4a18fe8149a9f20436685c65ddcec 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 8.1E-28 T 09-03-2017 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 BV404_RS00855 12d4a18fe8149a9f20436685c65ddcec 289 Gene3D G3DSA:3.40.50.300 1 288 1.3E-125 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS00740 73e45fcf3eef65b878390e4df9710b76 244 ProSitePatterns PS00195 Glutaredoxin active site. 175 191 - T 09-03-2017 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 BV404_RS00740 73e45fcf3eef65b878390e4df9710b76 244 Gene3D G3DSA:3.40.30.10 170 240 3.9E-24 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS00740 73e45fcf3eef65b878390e4df9710b76 244 Gene3D G3DSA:3.40.30.10 3 163 5.7E-63 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS00740 73e45fcf3eef65b878390e4df9710b76 244 Pfam PF00462 Glutaredoxin 173 231 1.2E-17 T 09-03-2017 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 BV404_RS00740 73e45fcf3eef65b878390e4df9710b76 244 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 164 241 1.2E-39 T 09-03-2017 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 BV404_RS00740 73e45fcf3eef65b878390e4df9710b76 244 PRINTS PR00160 Glutaredoxin signature 228 241 1.4E-13 T 09-03-2017 IPR014025 Glutaredoxin subgroup BV404_RS00740 73e45fcf3eef65b878390e4df9710b76 244 PRINTS PR00160 Glutaredoxin signature 214 227 1.4E-13 T 09-03-2017 IPR014025 Glutaredoxin subgroup BV404_RS00740 73e45fcf3eef65b878390e4df9710b76 244 PRINTS PR00160 Glutaredoxin signature 173 191 1.4E-13 T 09-03-2017 IPR014025 Glutaredoxin subgroup BV404_RS00740 73e45fcf3eef65b878390e4df9710b76 244 SUPERFAMILY SSF52833 2 240 1.3E-44 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS00740 73e45fcf3eef65b878390e4df9710b76 244 Pfam PF08534 Redoxin 5 160 2.3E-31 T 09-03-2017 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 BV404_RS00325 219e658e2f684ff446c8cf5e54d6824b 173 Gene3D G3DSA:3.40.50.300 3 168 3.2E-72 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS00325 219e658e2f684ff446c8cf5e54d6824b 173 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 6 165 2.9E-67 T 09-03-2017 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 BV404_RS00325 219e658e2f684ff446c8cf5e54d6824b 173 SUPERFAMILY SSF52540 3 166 2.04E-30 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS00325 219e658e2f684ff446c8cf5e54d6824b 173 Pfam PF01202 Shikimate kinase 12 165 9.7E-13 T 09-03-2017 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 BV404_RS03940 09e4af25bb52aadd70f246c4c8bf8d57 164 Gene3D G3DSA:2.30.30.40 95 146 7.3E-9 T 09-03-2017 BV404_RS03940 09e4af25bb52aadd70f246c4c8bf8d57 164 SUPERFAMILY SSF50341 14 158 1.02E-41 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 BV404_RS03940 09e4af25bb52aadd70f246c4c8bf8d57 164 Pfam PF01584 CheW-like domain 20 156 4.2E-40 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 BV404_RS03940 09e4af25bb52aadd70f246c4c8bf8d57 164 SMART SM00260 16 153 9.2E-50 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 BV404_RS03940 09e4af25bb52aadd70f246c4c8bf8d57 164 Gene3D G3DSA:2.40.50.180 59 94 3.9E-9 T 09-03-2017 BV404_RS08485 f721b4a83644f26fc82776dd8bb9574e 396 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 09-03-2017 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BV404_RS08485 f721b4a83644f26fc82776dd8bb9574e 396 Gene3D G3DSA:3.40.50.1100 96 175 4.1E-22 T 09-03-2017 BV404_RS08485 f721b4a83644f26fc82776dd8bb9574e 396 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 6 388 2.4E-195 T 09-03-2017 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BV404_RS08485 f721b4a83644f26fc82776dd8bb9574e 396 PIRSF PIRSF001413 1 395 6.2E-169 T 09-03-2017 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BV404_RS08485 f721b4a83644f26fc82776dd8bb9574e 396 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 390 49.711 T 09-03-2017 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BV404_RS08485 f721b4a83644f26fc82776dd8bb9574e 396 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 376 8.6E-52 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme BV404_RS08485 f721b4a83644f26fc82776dd8bb9574e 396 Gene3D G3DSA:3.40.50.1100 176 393 2.6E-95 T 09-03-2017 BV404_RS08485 f721b4a83644f26fc82776dd8bb9574e 396 SUPERFAMILY SSF53686 5 389 1.07E-141 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme BV404_RS09845 5f7d65c1d1a800adbddf466c413f13cb 441 PRINTS PR00173 Glutamate-aspartate symporter signature 20 40 1.5E-6 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BV404_RS09845 5f7d65c1d1a800adbddf466c413f13cb 441 PRINTS PR00173 Glutamate-aspartate symporter signature 374 393 1.5E-6 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BV404_RS09845 5f7d65c1d1a800adbddf466c413f13cb 441 Pfam PF13726 Na+-H+ antiporter family 2 88 4.1E-36 T 09-03-2017 IPR032813 Putative Na+/H+ antiporter, N-terminal BV404_RS09845 5f7d65c1d1a800adbddf466c413f13cb 441 Pfam PF03553 Na+/H+ antiporter family 150 435 9.2E-76 T 09-03-2017 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 BV404_RS09620 a0b0c48c71ad8fb41a93a8ff42e5d15c 201 SUPERFAMILY SSF52540 12 201 4.32E-69 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09620 a0b0c48c71ad8fb41a93a8ff42e5d15c 201 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 29 201 3.7E-67 T 09-03-2017 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 BV404_RS09620 a0b0c48c71ad8fb41a93a8ff42e5d15c 201 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 33 201 5.0E-57 T 09-03-2017 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 BV404_RS09620 a0b0c48c71ad8fb41a93a8ff42e5d15c 201 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 3 26 6.9E-7 T 09-03-2017 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 BV404_RS09620 a0b0c48c71ad8fb41a93a8ff42e5d15c 201 PIRSF PIRSF015617 6 201 7.8E-64 T 09-03-2017 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 BV404_RS09620 a0b0c48c71ad8fb41a93a8ff42e5d15c 201 Gene3D G3DSA:3.40.50.300 7 201 1.1E-73 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS06905 798c4d7f495b2739cfcbd223e935cbe8 250 TIGRFAM TIGR03950 sidero_Fe_reduc: siderophore ferric iron reductase, AHA_1954 family 10 234 5.0E-92 T 09-03-2017 IPR023998 Siderophore ferric iron reductase, AHA1954 family BV404_RS09890 9ff6492ac567c7bd47c83d6dc805deb4 496 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 424 441 - T 09-03-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BV404_RS09890 9ff6492ac567c7bd47c83d6dc805deb4 496 Pfam PF02378 Phosphotransferase system, EIIC 11 324 3.0E-80 T 09-03-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BV404_RS09890 9ff6492ac567c7bd47c83d6dc805deb4 496 Pfam PF00367 phosphotransferase system, EIIB 413 446 2.3E-12 T 09-03-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BV404_RS09890 9ff6492ac567c7bd47c83d6dc805deb4 496 Gene3D G3DSA:3.30.1360.60 408 484 4.3E-26 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 BV404_RS09890 9ff6492ac567c7bd47c83d6dc805deb4 496 SUPERFAMILY SSF55604 410 483 3.14E-20 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 BV404_RS09890 9ff6492ac567c7bd47c83d6dc805deb4 496 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 384 471 1.3E-20 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 BV404_RS09890 9ff6492ac567c7bd47c83d6dc805deb4 496 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 482 3.1E-224 T 09-03-2017 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 BV404_RS13480 aa31f512ab0d51eef3ade1a4823ccbd0 287 Pfam PF00483 Nucleotidyl transferase 2 238 2.9E-73 T 09-03-2017 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 BV404_RS13480 aa31f512ab0d51eef3ade1a4823ccbd0 287 Gene3D G3DSA:3.90.550.10 1 264 1.2E-68 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases BV404_RS13480 aa31f512ab0d51eef3ade1a4823ccbd0 287 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 2.3E-157 T 09-03-2017 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 BV404_RS13480 aa31f512ab0d51eef3ade1a4823ccbd0 287 SUPERFAMILY SSF53448 1 286 1.86E-94 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases BV404_RS06935 da9b11ee4855f8923e1096baa2da0910 67 PIRSF PIRSF037225 1 65 9.5E-26 T 09-03-2017 IPR017143 Uncharacterised conserved protein UCP037225 BV404_RS06935 da9b11ee4855f8923e1096baa2da0910 67 Pfam PF14255 Cysteine-rich CPXCG 10 60 2.5E-20 T 09-03-2017 IPR025990 Cysteine-rich CPXCG protein BV404_RS13055 bc73132286b96ceda09364f31e377df5 211 Pfam PF13972 Bacterial transcriptional repressor 57 199 1.2E-41 T 09-03-2017 IPR025722 Bacterial transcriptional repressor TetR BV404_RS13055 bc73132286b96ceda09364f31e377df5 211 Gene3D G3DSA:1.10.357.10 2 175 7.4E-28 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 BV404_RS13055 bc73132286b96ceda09364f31e377df5 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 3.8E-9 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BV404_RS13055 bc73132286b96ceda09364f31e377df5 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 3.8E-9 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BV404_RS13055 bc73132286b96ceda09364f31e377df5 211 SUPERFAMILY SSF46689 2 72 4.47E-17 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS13055 bc73132286b96ceda09364f31e377df5 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 53 8.4E-14 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BV404_RS05625 3ddfb3ad56f85cb4788e2c3aeae2cbb9 205 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 203 36.098 T 09-03-2017 IPR007451 Uncharacterised protein family UPF0274 BV404_RS05625 3ddfb3ad56f85cb4788e2c3aeae2cbb9 205 Gene3D G3DSA:1.10.3890.10 3 204 6.3E-88 T 09-03-2017 IPR007451 Uncharacterised protein family UPF0274 BV404_RS05625 3ddfb3ad56f85cb4788e2c3aeae2cbb9 205 SUPERFAMILY SSF101322 2 204 2.35E-80 T 09-03-2017 IPR007451 Uncharacterised protein family UPF0274 BV404_RS05625 3ddfb3ad56f85cb4788e2c3aeae2cbb9 205 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 194 1.0E-97 T 09-03-2017 IPR007451 Uncharacterised protein family UPF0274 BV404_RS05625 3ddfb3ad56f85cb4788e2c3aeae2cbb9 205 Pfam PF04356 Protein of unknown function (DUF489) 7 195 3.5E-77 T 09-03-2017 IPR007451 Uncharacterised protein family UPF0274 BV404_RS08705 03634bb30a2d534f5bbd76610a09a01e 560 SUPERFAMILY SSF116726 294 377 2.09E-10 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BV404_RS08705 03634bb30a2d534f5bbd76610a09a01e 560 Gene3D G3DSA:3.30.70.1450 231 286 2.9E-7 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BV404_RS08705 03634bb30a2d534f5bbd76610a09a01e 560 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 21 172 1.8E-30 T 09-03-2017 IPR006512 YidE/YbjL duplication BV404_RS08705 03634bb30a2d534f5bbd76610a09a01e 560 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 393 544 1.4E-36 T 09-03-2017 IPR006512 YidE/YbjL duplication BV404_RS08705 03634bb30a2d534f5bbd76610a09a01e 560 SUPERFAMILY SSF116726 230 285 3.53E-10 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BV404_RS08705 03634bb30a2d534f5bbd76610a09a01e 560 Pfam PF02080 TrkA-C domain 230 281 1.3E-8 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BV404_RS08705 03634bb30a2d534f5bbd76610a09a01e 560 Pfam PF02080 TrkA-C domain 309 374 4.6E-9 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BV404_RS08705 03634bb30a2d534f5bbd76610a09a01e 560 Pfam PF06826 Predicted Permease Membrane Region 389 557 3.1E-42 T 09-03-2017 IPR006512 YidE/YbjL duplication BV404_RS08705 03634bb30a2d534f5bbd76610a09a01e 560 Pfam PF06826 Predicted Permease Membrane Region 17 185 1.3E-38 T 09-03-2017 IPR006512 YidE/YbjL duplication BV404_RS08705 03634bb30a2d534f5bbd76610a09a01e 560 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 560 58.416 T 09-03-2017 IPR023017 Transport protein YbjL, putative BV404_RS08705 03634bb30a2d534f5bbd76610a09a01e 560 Gene3D G3DSA:3.30.70.1450 308 377 1.8E-7 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BV404_RS05370 6fcaa2f61c430e8c36669a7fabe8a263 254 SMART SM00563 86 196 1.6E-12 T 09-03-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 BV404_RS05370 6fcaa2f61c430e8c36669a7fabe8a263 254 SUPERFAMILY SSF69593 55 248 5.23E-23 T 09-03-2017 BV404_RS05370 6fcaa2f61c430e8c36669a7fabe8a263 254 Pfam PF01553 Acyltransferase 73 189 8.8E-15 T 09-03-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 BV404_RS05370 6fcaa2f61c430e8c36669a7fabe8a263 254 Gene3D G3DSA:3.40.1130.10 75 176 4.6E-7 T 09-03-2017 BV404_RS00835 7d5c0d3c86420ba80fdfb9749e5789f8 339 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 338 1.3E-130 T 09-03-2017 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 BV404_RS00835 7d5c0d3c86420ba80fdfb9749e5789f8 339 Gene3D G3DSA:2.40.40.20 277 339 1.7E-12 T 09-03-2017 BV404_RS00835 7d5c0d3c86420ba80fdfb9749e5789f8 339 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 338 7.7E-133 T 09-03-2017 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 BV404_RS00835 7d5c0d3c86420ba80fdfb9749e5789f8 339 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 337 1.2E-138 T 09-03-2017 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 BV404_RS00835 7d5c0d3c86420ba80fdfb9749e5789f8 339 SUPERFAMILY SSF55729 1 337 3.78E-129 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS13520 0a2758dde8b44a2e4af1cec12b0b343a 313 SUPERFAMILY SSF51735 1 308 1.15E-58 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS13520 0a2758dde8b44a2e4af1cec12b0b343a 313 Gene3D G3DSA:3.40.50.720 2 176 4.2E-18 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS13520 0a2758dde8b44a2e4af1cec12b0b343a 313 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 313 54.256 T 09-03-2017 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 BV404_RS13520 0a2758dde8b44a2e4af1cec12b0b343a 313 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 241 2.7E-45 T 09-03-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 BV404_RS13520 0a2758dde8b44a2e4af1cec12b0b343a 313 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 311 6.5E-125 T 09-03-2017 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 BV404_RS13520 0a2758dde8b44a2e4af1cec12b0b343a 313 Gene3D G3DSA:3.90.25.10 177 294 1.5E-37 T 09-03-2017 BV404_RS04250 6d22859af92ddd560f821d1a90b097d6 307 Pfam PF00698 Acyl transferase domain 7 291 3.4E-38 T 09-03-2017 IPR014043 Acyl transferase BV404_RS04250 6d22859af92ddd560f821d1a90b097d6 307 Gene3D G3DSA:3.30.70.250 125 196 3.7E-32 T 09-03-2017 BV404_RS04250 6d22859af92ddd560f821d1a90b097d6 307 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 306 2.6E-45 T 09-03-2017 IPR020801 Polyketide synthase, acyl transferase domain BV404_RS04250 6d22859af92ddd560f821d1a90b097d6 307 PIRSF PIRSF000446 1 307 2.5E-136 T 09-03-2017 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 BV404_RS04250 6d22859af92ddd560f821d1a90b097d6 307 SUPERFAMILY SSF55048 128 197 2.49E-18 T 09-03-2017 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 BV404_RS04250 6d22859af92ddd560f821d1a90b097d6 307 Gene3D G3DSA:3.40.366.10 2 122 1.6E-73 T 09-03-2017 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 BV404_RS04250 6d22859af92ddd560f821d1a90b097d6 307 Gene3D G3DSA:3.40.366.10 197 301 1.6E-73 T 09-03-2017 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 BV404_RS04250 6d22859af92ddd560f821d1a90b097d6 307 SUPERFAMILY SSF52151 190 305 7.85E-81 T 09-03-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 BV404_RS04250 6d22859af92ddd560f821d1a90b097d6 307 SUPERFAMILY SSF52151 4 122 7.85E-81 T 09-03-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 BV404_RS04250 6d22859af92ddd560f821d1a90b097d6 307 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 2.5E-126 T 09-03-2017 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 BV404_RS09500 fe4bd6231874f3173cd6cbc8b40415ee 276 Gene3D G3DSA:3.40.50.150 79 251 2.1E-19 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS09500 fe4bd6231874f3173cd6cbc8b40415ee 276 SUPERFAMILY SSF53335 4 254 2.84E-43 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS09500 fe4bd6231874f3173cd6cbc8b40415ee 276 PIRSF PIRSF018249 1 272 8.1E-89 T 09-03-2017 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 BV404_RS09500 fe4bd6231874f3173cd6cbc8b40415ee 276 Pfam PF13847 Methyltransferase domain 85 223 7.0E-15 T 09-03-2017 IPR025714 Methyltransferase domain BV404_RS03430 503ac882f5dddafb221913705b9c88ff 78 SUPERFAMILY SSF64307 5 64 1.09E-11 T 09-03-2017 IPR001455 TusA-like domain BV404_RS03430 503ac882f5dddafb221913705b9c88ff 78 Gene3D G3DSA:3.30.110.40 4 64 2.7E-12 T 09-03-2017 IPR001455 TusA-like domain BV404_RS03430 503ac882f5dddafb221913705b9c88ff 78 Pfam PF01206 Sulfurtransferase TusA 5 63 2.7E-13 T 09-03-2017 IPR001455 TusA-like domain BV404_RS00550 948c587d628871b1acbabd775af07a13 733 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 732 25.259 T 09-03-2017 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 BV404_RS00550 948c587d628871b1acbabd775af07a13 733 Gene3D G3DSA:3.40.50.300 198 381 4.2E-38 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS00550 948c587d628871b1acbabd775af07a13 733 TIGRFAM TIGR00595 priA: primosomal protein N' 221 729 1.1E-190 T 09-03-2017 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 BV404_RS00550 948c587d628871b1acbabd775af07a13 733 Pfam PF00270 DEAD/DEAH box helicase 204 363 1.0E-14 T 09-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BV404_RS00550 948c587d628871b1acbabd775af07a13 733 SUPERFAMILY SSF52540 461 618 7.15E-27 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS00550 948c587d628871b1acbabd775af07a13 733 SMART SM00490 492 589 4.3E-12 T 09-03-2017 IPR001650 Helicase, C-terminal BV404_RS00550 948c587d628871b1acbabd775af07a13 733 SUPERFAMILY SSF52540 177 379 1.01E-39 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS00550 948c587d628871b1acbabd775af07a13 733 SMART SM00487 194 390 8.4E-18 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain BV404_RS00550 948c587d628871b1acbabd775af07a13 733 Gene3D G3DSA:3.40.50.300 459 632 4.8E-34 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS00550 948c587d628871b1acbabd775af07a13 733 Pfam PF00271 Helicase conserved C-terminal domain 500 588 1.8E-7 T 09-03-2017 IPR001650 Helicase, C-terminal BV404_RS21160 ed0e96d39e43e507a0a4a45914134f0c 193 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 2 193 5.6E-26 T 09-03-2017 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit BV404_RS07155 ad7e2713337a8f3dba6bf8dadd1323bd 160 Pfam PF05751 FixH 7 147 3.9E-42 T 09-03-2017 IPR008620 Nitrogen fixation protein FixH BV404_RS10720 5446c4edf0b6e7fafd8f809e7ff15c7e 208 PIRSF PIRSF004525 6 208 1.8E-10 T 09-03-2017 IPR016419 Prepilin peptidase-dependent protein B, predicted BV404_RS13420 60151be2b1ce7df228797716d7551fe8 429 Pfam PF01565 FAD binding domain 30 137 1.4E-17 T 09-03-2017 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 BV404_RS13420 60151be2b1ce7df228797716d7551fe8 429 SUPERFAMILY SSF56176 23 171 2.15E-32 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 BV404_RS13420 60151be2b1ce7df228797716d7551fe8 429 Gene3D G3DSA:3.30.465.10 58 171 5.8E-27 T 09-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 BV404_RS11980 38c9ff4955dd90c04d69d9fb38cf14fb 236 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 102 109 - T 09-03-2017 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 BV404_RS11980 38c9ff4955dd90c04d69d9fb38cf14fb 236 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 7 226 1.7E-75 T 09-03-2017 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 BV404_RS11980 38c9ff4955dd90c04d69d9fb38cf14fb 236 Gene3D G3DSA:3.90.550.10 2 230 8.3E-76 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases BV404_RS11980 38c9ff4955dd90c04d69d9fb38cf14fb 236 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 4 229 31.73 T 09-03-2017 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 BV404_RS11980 38c9ff4955dd90c04d69d9fb38cf14fb 236 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 227 9.5E-79 T 09-03-2017 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 BV404_RS11980 38c9ff4955dd90c04d69d9fb38cf14fb 236 SUPERFAMILY SSF53448 4 227 5.63E-60 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases BV404_RS09550 3b3e7e312460f94c24f2aa8c0f019235 181 SUPERFAMILY SSF53271 11 178 5.68E-52 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like BV404_RS09550 3b3e7e312460f94c24f2aa8c0f019235 181 Pfam PF00156 Phosphoribosyl transferase domain 31 154 2.9E-14 T 09-03-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 BV404_RS09550 3b3e7e312460f94c24f2aa8c0f019235 181 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 9 177 2.9E-73 T 09-03-2017 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|Reactome: R-HSA-74217 BV404_RS09550 3b3e7e312460f94c24f2aa8c0f019235 181 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 9 178 38.156 T 09-03-2017 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|Reactome: R-HSA-74217 BV404_RS09550 3b3e7e312460f94c24f2aa8c0f019235 181 Gene3D G3DSA:3.40.50.2020 5 179 2.8E-69 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like BV404_RS09185 059b28cf52fe108625a97381918a9329 783 SMART SM00382 347 491 6.2E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS09185 059b28cf52fe108625a97381918a9329 783 SMART SM00464 10 201 8.0E-75 T 09-03-2017 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 BV404_RS09185 059b28cf52fe108625a97381918a9329 783 Gene3D G3DSA:3.40.50.300 309 498 3.0E-33 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09185 059b28cf52fe108625a97381918a9329 783 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 569 771 2.9E-99 T 09-03-2017 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 BV404_RS09185 059b28cf52fe108625a97381918a9329 783 SUPERFAMILY SSF54211 594 770 7.59E-59 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold BV404_RS09185 059b28cf52fe108625a97381918a9329 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 702 721 3.6E-56 T 09-03-2017 BV404_RS09185 059b28cf52fe108625a97381918a9329 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 355 374 3.6E-56 T 09-03-2017 BV404_RS09185 059b28cf52fe108625a97381918a9329 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 594 610 3.6E-56 T 09-03-2017 BV404_RS09185 059b28cf52fe108625a97381918a9329 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 672 691 3.6E-56 T 09-03-2017 BV404_RS09185 059b28cf52fe108625a97381918a9329 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 725 743 3.6E-56 T 09-03-2017 BV404_RS09185 059b28cf52fe108625a97381918a9329 783 Gene3D G3DSA:3.30.230.10 590 770 2.1E-76 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BV404_RS09185 059b28cf52fe108625a97381918a9329 783 SUPERFAMILY SSF88697 10 200 4.47E-48 T 09-03-2017 IPR015947 PUA-like domain BV404_RS09185 059b28cf52fe108625a97381918a9329 783 PIRSF PIRSF001174 1 774 0.0 T 09-03-2017 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 BV404_RS09185 059b28cf52fe108625a97381918a9329 783 Hamap MF_01973 Lon protease [lon]. 11 771 72.167 T 09-03-2017 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 BV404_RS09185 059b28cf52fe108625a97381918a9329 783 Gene3D G3DSA:1.10.8.60 499 583 2.3E-33 T 09-03-2017 BV404_RS09185 059b28cf52fe108625a97381918a9329 783 TIGRFAM TIGR00763 lon: endopeptidase La 12 770 0.0 T 09-03-2017 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 BV404_RS09185 059b28cf52fe108625a97381918a9329 783 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 196 9.6E-42 T 09-03-2017 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 BV404_RS09185 059b28cf52fe108625a97381918a9329 783 SUPERFAMILY SSF52540 313 586 8.27E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09185 059b28cf52fe108625a97381918a9329 783 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 351 488 4.8E-17 T 09-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 BV404_RS03225 8ca93942dc19ad4024f3a3af17025700 644 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 5 351 4.4E-58 T 09-03-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BV404_RS03225 8ca93942dc19ad4024f3a3af17025700 644 PRINTS PR01005 Flagellar hook-associated protein signature 158 182 3.5E-8 T 09-03-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BV404_RS03225 8ca93942dc19ad4024f3a3af17025700 644 PRINTS PR01005 Flagellar hook-associated protein signature 458 479 3.5E-8 T 09-03-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BV404_RS03225 8ca93942dc19ad4024f3a3af17025700 644 PRINTS PR01005 Flagellar hook-associated protein signature 50 72 3.5E-8 T 09-03-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BV404_RS03225 8ca93942dc19ad4024f3a3af17025700 644 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 3.5E-8 T 09-03-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BV404_RS03225 8ca93942dc19ad4024f3a3af17025700 644 SUPERFAMILY SSF64518 510 642 6.8E-25 T 09-03-2017 BV404_RS03225 8ca93942dc19ad4024f3a3af17025700 644 SUPERFAMILY SSF64518 169 409 6.8E-25 T 09-03-2017 BV404_RS03225 8ca93942dc19ad4024f3a3af17025700 644 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 599 642 7.9E-10 T 09-03-2017 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BV404_RS12300 9eb82fe215ba476a74d7ca410ea5a835 185 Pfam PF02325 YGGT family 109 173 1.9E-19 T 09-03-2017 IPR003425 CCB3/YggT GO:0016020 BV404_RS12300 9eb82fe215ba476a74d7ca410ea5a835 185 Pfam PF02325 YGGT family 10 78 1.8E-19 T 09-03-2017 IPR003425 CCB3/YggT GO:0016020 BV404_RS03445 5cbf04c53f4649b08dd4748382c014e4 155 SUPERFAMILY SSF52833 1 152 4.56E-47 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS03445 5cbf04c53f4649b08dd4748382c014e4 155 Gene3D G3DSA:3.40.30.10 2 153 1.7E-48 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS03445 5cbf04c53f4649b08dd4748382c014e4 155 Pfam PF00578 AhpC/TSA family 7 134 6.0E-35 T 09-03-2017 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BV404_RS09635 f2e70149875dc4023c69d1b0d7a08d45 358 SUPERFAMILY SSF52540 85 322 3.15E-56 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09635 f2e70149875dc4023c69d1b0d7a08d45 358 ProSitePatterns PS01215 Mrp family signature. 201 217 - T 09-03-2017 IPR000808 Mrp, conserved site GO:0005524 BV404_RS09635 f2e70149875dc4023c69d1b0d7a08d45 358 Hamap MF_02040 Iron-sulfur cluster carrier protein. 89 338 36.357 T 09-03-2017 IPR019591 Mrp/NBP35 ATP-binding protein BV404_RS09635 f2e70149875dc4023c69d1b0d7a08d45 358 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 94 337 6.5E-99 T 09-03-2017 IPR019591 Mrp/NBP35 ATP-binding protein BV404_RS09635 f2e70149875dc4023c69d1b0d7a08d45 358 Gene3D G3DSA:3.40.50.300 88 336 1.0E-103 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS05180 738e5c8d6ef0c79bddc5b19ac8059666 231 SUPERFAMILY SSF51182 1 230 7.89E-70 T 09-03-2017 IPR011051 RmlC-like cupin domain BV404_RS05180 738e5c8d6ef0c79bddc5b19ac8059666 231 PIRSF PIRSF006232 1 229 1.3E-52 T 09-03-2017 IPR012093 Pirin BV404_RS05180 738e5c8d6ef0c79bddc5b19ac8059666 231 Gene3D G3DSA:2.60.120.10 3 230 3.1E-66 T 09-03-2017 IPR014710 RmlC-like jelly roll fold BV404_RS05180 738e5c8d6ef0c79bddc5b19ac8059666 231 Pfam PF02678 Pirin 7 119 1.1E-32 T 09-03-2017 IPR003829 Pirin, N-terminal domain BV404_RS11655 00c1a2794f13fce703d8a44d53c5bd33 486 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 25 473 5.2E-189 T 09-03-2017 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BV404_RS11655 00c1a2794f13fce703d8a44d53c5bd33 486 SUPERFAMILY SSF53623 108 323 7.33E-73 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 BV404_RS11655 00c1a2794f13fce703d8a44d53c5bd33 486 SUPERFAMILY SSF53244 326 474 6.04E-48 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BV404_RS11655 00c1a2794f13fce703d8a44d53c5bd33 486 Gene3D G3DSA:3.40.50.720 25 110 1.1E-37 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS11655 00c1a2794f13fce703d8a44d53c5bd33 486 Gene3D G3DSA:3.40.1190.10 111 328 5.1E-84 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 BV404_RS11655 00c1a2794f13fce703d8a44d53c5bd33 486 Pfam PF08245 Mur ligase middle domain 127 307 7.7E-29 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 BV404_RS11655 00c1a2794f13fce703d8a44d53c5bd33 486 Pfam PF02875 Mur ligase family, glutamate ligase domain 329 417 1.8E-20 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BV404_RS11655 00c1a2794f13fce703d8a44d53c5bd33 486 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 22 479 43.56 T 09-03-2017 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BV404_RS11655 00c1a2794f13fce703d8a44d53c5bd33 486 SUPERFAMILY SSF51984 16 109 1.44E-28 T 09-03-2017 BV404_RS11655 00c1a2794f13fce703d8a44d53c5bd33 486 Gene3D G3DSA:3.90.190.20 329 475 6.1E-57 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BV404_RS11655 00c1a2794f13fce703d8a44d53c5bd33 486 Pfam PF01225 Mur ligase family, catalytic domain 25 121 3.9E-29 T 09-03-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 BV404_RS03385 7dfb503af475b3dd3d64bacc828503c1 283 Gene3D G3DSA:3.20.20.70 16 277 1.3E-106 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS03385 7dfb503af475b3dd3d64bacc828503c1 283 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 48.357 T 09-03-2017 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 BV404_RS03385 7dfb503af475b3dd3d64bacc828503c1 283 Pfam PF00793 DAHP synthetase I family 10 275 1.7E-69 T 09-03-2017 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 BV404_RS03385 7dfb503af475b3dd3d64bacc828503c1 283 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 4.1E-117 T 09-03-2017 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 BV404_RS03385 7dfb503af475b3dd3d64bacc828503c1 283 SUPERFAMILY SSF51569 2 278 6.69E-105 T 09-03-2017 BV404_RS08095 a4e4fb10bc35bd0821448ff13706e316 346 Gene3D G3DSA:2.120.10.30 8 346 2.4E-84 T 09-03-2017 IPR011042 Six-bladed beta-propeller, TolB-like BV404_RS08095 a4e4fb10bc35bd0821448ff13706e316 346 SUPERFAMILY SSF50952 5 344 6.67E-34 T 09-03-2017 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 BV404_RS08095 a4e4fb10bc35bd0821448ff13706e316 346 Pfam PF07995 Glucose / Sorbosone dehydrogenase 22 343 3.2E-105 T 09-03-2017 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 BV404_RS06015 b047a526562577aa453884c5bd24b8f7 115 Pfam PF02627 Carboxymuconolactone decarboxylase family 23 101 1.6E-22 T 09-03-2017 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 BV404_RS06015 b047a526562577aa453884c5bd24b8f7 115 SUPERFAMILY SSF69118 5 112 4.71E-29 T 09-03-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 BV404_RS06015 b047a526562577aa453884c5bd24b8f7 115 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 40 88 8.2E-12 T 09-03-2017 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 BV404_RS06015 b047a526562577aa453884c5bd24b8f7 115 Gene3D G3DSA:1.20.1290.10 3 113 2.5E-36 T 09-03-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 BV404_RS10505 b8b03a509bf79179dbd0f6742c513194 269 SUPERFAMILY SSF53850 32 269 1.0E-79 T 09-03-2017 BV404_RS10505 b8b03a509bf79179dbd0f6742c513194 269 Pfam PF03180 NLPA lipoprotein 33 269 2.2E-99 T 09-03-2017 IPR004872 Lipoprotein NlpA family BV404_RS10505 b8b03a509bf79179dbd0f6742c513194 269 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 15 269 5.0E-126 T 09-03-2017 IPR004872 Lipoprotein NlpA family BV404_RS10505 b8b03a509bf79179dbd0f6742c513194 269 Gene3D G3DSA:3.40.190.10 30 161 2.3E-57 T 09-03-2017 BV404_RS10505 b8b03a509bf79179dbd0f6742c513194 269 PIRSF PIRSF002854 1 269 2.2E-100 T 09-03-2017 IPR004872 Lipoprotein NlpA family BV404_RS07680 d0941ffadc6a6b6511c495ba725563e4 135 Gene3D G3DSA:1.10.760.10 16 102 1.4E-11 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 BV404_RS07680 d0941ffadc6a6b6511c495ba725563e4 135 Pfam PF00034 Cytochrome c 18 101 2.8E-5 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 BV404_RS07680 d0941ffadc6a6b6511c495ba725563e4 135 SUPERFAMILY SSF46626 16 101 1.28E-12 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 BV404_RS13300 a7d8d3b2021ba0144518242f91665fdf 295 Gene3D G3DSA:3.40.50.150 99 287 1.9E-43 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS13300 a7d8d3b2021ba0144518242f91665fdf 295 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 287 8.6E-110 T 09-03-2017 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 BV404_RS13300 a7d8d3b2021ba0144518242f91665fdf 295 PIRSF PIRSF000401 1 295 1.8E-100 T 09-03-2017 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 BV404_RS13300 a7d8d3b2021ba0144518242f91665fdf 295 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 293 2.8E-105 T 09-03-2017 BV404_RS13300 a7d8d3b2021ba0144518242f91665fdf 295 SUPERFAMILY SSF53335 44 291 1.01E-46 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS13300 a7d8d3b2021ba0144518242f91665fdf 295 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 293 33.879 T 09-03-2017 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 BV404_RS07090 e08f74b8b95eeab95052109967a77131 343 Pfam PF13416 Bacterial extracellular solute-binding protein 42 301 1.6E-36 T 09-03-2017 BV404_RS07090 e08f74b8b95eeab95052109967a77131 343 Gene3D G3DSA:3.40.190.10 144 287 1.2E-55 T 09-03-2017 BV404_RS07090 e08f74b8b95eeab95052109967a77131 343 PIRSF PIRSF019574 1 343 1.1E-108 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BV404_RS07090 e08f74b8b95eeab95052109967a77131 343 Gene3D G3DSA:3.40.190.10 27 143 1.3E-23 T 09-03-2017 BV404_RS07090 e08f74b8b95eeab95052109967a77131 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 91 104 1.3E-71 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BV404_RS07090 e08f74b8b95eeab95052109967a77131 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 166 185 1.3E-71 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BV404_RS07090 e08f74b8b95eeab95052109967a77131 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 122 138 1.3E-71 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BV404_RS07090 e08f74b8b95eeab95052109967a77131 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 203 222 1.3E-71 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BV404_RS07090 e08f74b8b95eeab95052109967a77131 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 75 89 1.3E-71 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BV404_RS07090 e08f74b8b95eeab95052109967a77131 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 32 48 1.3E-71 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BV404_RS07090 e08f74b8b95eeab95052109967a77131 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 48 69 1.3E-71 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BV404_RS07090 e08f74b8b95eeab95052109967a77131 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 247 266 1.3E-71 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BV404_RS07090 e08f74b8b95eeab95052109967a77131 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 148 162 1.3E-71 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BV404_RS07090 e08f74b8b95eeab95052109967a77131 343 SUPERFAMILY SSF53850 26 331 7.39E-86 T 09-03-2017 BV404_RS09155 3f4d2ae1f88eff3f53aa53136fad3d03 94 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 30.941 T 09-03-2017 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 BV404_RS09155 3f4d2ae1f88eff3f53aa53136fad3d03 94 Gene3D G3DSA:4.10.520.10 1 92 8.6E-36 T 09-03-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 BV404_RS09155 3f4d2ae1f88eff3f53aa53136fad3d03 94 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 6.0E-19 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 BV404_RS09155 3f4d2ae1f88eff3f53aa53136fad3d03 94 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 6.0E-19 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 BV404_RS09155 3f4d2ae1f88eff3f53aa53136fad3d03 94 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 6.0E-19 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 BV404_RS09155 3f4d2ae1f88eff3f53aa53136fad3d03 94 SMART SM00411 1 91 8.3E-44 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 BV404_RS09155 3f4d2ae1f88eff3f53aa53136fad3d03 94 SUPERFAMILY SSF47729 1 91 5.74E-31 T 09-03-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 BV404_RS09155 3f4d2ae1f88eff3f53aa53136fad3d03 94 Pfam PF00216 Bacterial DNA-binding protein 1 91 1.3E-31 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 BV404_RS09155 3f4d2ae1f88eff3f53aa53136fad3d03 94 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 92 8.8E-49 T 09-03-2017 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 BV404_RS09155 3f4d2ae1f88eff3f53aa53136fad3d03 94 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 09-03-2017 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 BV404_RS04155 5fd8907fe43d1cefb433aeebda2f3798 601 Pfam PF00884 Sulfatase 259 514 5.3E-22 T 09-03-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 BV404_RS04155 5fd8907fe43d1cefb433aeebda2f3798 601 Pfam PF11893 Domain of unknown function (DUF3413) 6 251 5.2E-99 T 09-03-2017 IPR024588 Inner membrane protein YejM, N-terminal BV404_RS04155 5fd8907fe43d1cefb433aeebda2f3798 601 Gene3D G3DSA:3.40.720.10 259 533 1.2E-32 T 09-03-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 BV404_RS04155 5fd8907fe43d1cefb433aeebda2f3798 601 PIRSF PIRSF004950 6 599 7.4E-240 T 09-03-2017 IPR012159 Inner membrane protein YejM BV404_RS04155 5fd8907fe43d1cefb433aeebda2f3798 601 SUPERFAMILY SSF53649 256 595 8.0E-50 T 09-03-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 BV404_RS06540 2cf62c7d4baeb80a8afd7b4f5881fe1a 537 SUPERFAMILY SSF58104 224 533 4.19E-62 T 09-03-2017 BV404_RS06540 2cf62c7d4baeb80a8afd7b4f5881fe1a 537 Pfam PF00672 HAMP domain 184 251 7.4E-11 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 BV404_RS06540 2cf62c7d4baeb80a8afd7b4f5881fe1a 537 Gene3D G3DSA:1.10.287.950 286 498 6.3E-49 T 09-03-2017 BV404_RS06540 2cf62c7d4baeb80a8afd7b4f5881fe1a 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 369 396 5.7E-22 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 BV404_RS06540 2cf62c7d4baeb80a8afd7b4f5881fe1a 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 398 427 5.7E-22 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 BV404_RS06540 2cf62c7d4baeb80a8afd7b4f5881fe1a 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 3 28 5.7E-22 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 BV404_RS06540 2cf62c7d4baeb80a8afd7b4f5881fe1a 537 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 531 2.4E-44 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 BV404_RS06540 2cf62c7d4baeb80a8afd7b4f5881fe1a 537 SMART SM00283 271 532 7.5E-50 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 BV404_RS06540 2cf62c7d4baeb80a8afd7b4f5881fe1a 537 SMART SM00304 203 256 1.3E-7 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 BV404_RS06540 2cf62c7d4baeb80a8afd7b4f5881fe1a 537 SMART SM00304 413 470 110.0 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 BV404_RS06080 1c2cec3dc629faadb073df12c7f7b3fa 297 SUPERFAMILY SSF51569 1 295 2.41E-67 T 09-03-2017 BV404_RS06080 1c2cec3dc629faadb073df12c7f7b3fa 297 Pfam PF00701 Dihydrodipicolinate synthetase family 2 293 8.8E-40 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 BV404_RS06080 1c2cec3dc629faadb073df12c7f7b3fa 297 Gene3D G3DSA:3.20.20.70 1 296 5.2E-90 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS06080 1c2cec3dc629faadb073df12c7f7b3fa 297 PIRSF PIRSF001365 1 297 5.9E-59 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 BV404_RS06080 1c2cec3dc629faadb073df12c7f7b3fa 297 SMART SM01130 1 295 5.5E-71 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 BV404_RS06080 1c2cec3dc629faadb073df12c7f7b3fa 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 101 117 2.5E-11 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 BV404_RS06080 1c2cec3dc629faadb073df12c7f7b3fa 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 34 55 2.5E-11 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 BV404_RS06080 1c2cec3dc629faadb073df12c7f7b3fa 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 69 87 2.5E-11 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 BV404_RS06080 1c2cec3dc629faadb073df12c7f7b3fa 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 126 143 2.5E-11 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 BV404_RS04525 13d70e0ba28ac7b0c8ae1cd4b74019ad 226 Pfam PF13860 FlgD Ig-like domain 111 182 5.6E-11 T 09-03-2017 IPR025965 FlgD Ig-like domain BV404_RS04525 13d70e0ba28ac7b0c8ae1cd4b74019ad 226 Pfam PF03963 Flagellar hook capping protein - N-terminal region 15 84 2.0E-18 T 09-03-2017 IPR005648 Flagellar hook capping protein BV404_RS04525 13d70e0ba28ac7b0c8ae1cd4b74019ad 226 Pfam PF13861 FlgD Tudor-like domain 93 222 1.2E-12 T 09-03-2017 IPR025963 FlgD Tudor-like domain BV404_RS02840 5d5b7831e6828a43e15e29be69384038 369 Gene3D G3DSA:3.40.430.10 134 361 7.4E-61 T 09-03-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 BV404_RS02840 5d5b7831e6828a43e15e29be69384038 369 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 151 363 1.9E-54 T 09-03-2017 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 BV404_RS02840 5d5b7831e6828a43e15e29be69384038 369 Gene3D G3DSA:3.40.140.10 8 133 2.0E-30 T 09-03-2017 BV404_RS02840 5d5b7831e6828a43e15e29be69384038 369 SUPERFAMILY SSF53927 8 150 2.26E-44 T 09-03-2017 IPR016193 Cytidine deaminase-like GO:0003824 BV404_RS02840 5d5b7831e6828a43e15e29be69384038 369 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 55 93 - T 09-03-2017 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 BV404_RS02840 5d5b7831e6828a43e15e29be69384038 369 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 12 359 8.1E-127 T 09-03-2017 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 BV404_RS02840 5d5b7831e6828a43e15e29be69384038 369 Pfam PF01872 RibD C-terminal domain 152 358 8.0E-47 T 09-03-2017 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 BV404_RS02840 5d5b7831e6828a43e15e29be69384038 369 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 8 104 1.0E-18 T 09-03-2017 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 BV404_RS02840 5d5b7831e6828a43e15e29be69384038 369 PIRSF PIRSF006769 4 366 7.6E-118 T 09-03-2017 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 BV404_RS02840 5d5b7831e6828a43e15e29be69384038 369 SUPERFAMILY SSF53597 149 360 7.65E-52 T 09-03-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 BV404_RS10300 a423986bb0b442fbafc7a39403e9b5a2 202 SMART SM00448 2 112 6.0E-25 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS10300 a423986bb0b442fbafc7a39403e9b5a2 202 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 196 2.4E-19 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BV404_RS10300 a423986bb0b442fbafc7a39403e9b5a2 202 Gene3D G3DSA:1.10.10.10 117 199 2.8E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS10300 a423986bb0b442fbafc7a39403e9b5a2 202 ProSitePatterns PS00622 LuxR-type HTH domain signature. 157 184 - T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BV404_RS10300 a423986bb0b442fbafc7a39403e9b5a2 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 9.7E-12 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BV404_RS10300 a423986bb0b442fbafc7a39403e9b5a2 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 9.7E-12 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BV404_RS10300 a423986bb0b442fbafc7a39403e9b5a2 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 9.7E-12 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BV404_RS10300 a423986bb0b442fbafc7a39403e9b5a2 202 Gene3D G3DSA:3.40.50.2300 1 116 7.0E-27 T 09-03-2017 BV404_RS10300 a423986bb0b442fbafc7a39403e9b5a2 202 Pfam PF00072 Response regulator receiver domain 4 113 1.5E-23 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS10300 a423986bb0b442fbafc7a39403e9b5a2 202 SUPERFAMILY SSF46894 126 198 3.2E-19 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BV404_RS10300 a423986bb0b442fbafc7a39403e9b5a2 202 SUPERFAMILY SSF52172 1 124 3.42E-26 T 09-03-2017 IPR011006 CheY-like superfamily BV404_RS10300 a423986bb0b442fbafc7a39403e9b5a2 202 SMART SM00421 140 197 2.1E-21 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BV404_RS06280 a30303ebca07a8d2c8f2250307611a11 223 Gene3D G3DSA:3.40.50.300 1 217 1.6E-58 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS06280 a30303ebca07a8d2c8f2250307611a11 223 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS06280 a30303ebca07a8d2c8f2250307611a11 223 Pfam PF00005 ABC transporter 21 167 5.3E-30 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS06280 a30303ebca07a8d2c8f2250307611a11 223 SMART SM00382 30 218 2.9E-10 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS06280 a30303ebca07a8d2c8f2250307611a11 223 SUPERFAMILY SSF52540 1 218 9.16E-60 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS02720 4f61d88ba4712f45e4ee0fb0024eaedb 334 SUPERFAMILY SSF143631 23 332 1.83E-103 T 09-03-2017 IPR003374 ApbE-like domain BV404_RS02720 4f61d88ba4712f45e4ee0fb0024eaedb 334 PIRSF PIRSF006268 1 333 5.0E-94 T 09-03-2017 IPR024932 Flavin transferase ApbE GO:0017013 BV404_RS02720 4f61d88ba4712f45e4ee0fb0024eaedb 334 Pfam PF02424 ApbE family 31 309 3.2E-85 T 09-03-2017 IPR024932 Flavin transferase ApbE GO:0017013 BV404_RS10475 780d80e46d945bd4ec66d8beb59b29ef 478 Pfam PF00367 phosphotransferase system, EIIB 15 47 5.0E-13 T 09-03-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BV404_RS10475 780d80e46d945bd4ec66d8beb59b29ef 478 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 10 465 2.2E-206 T 09-03-2017 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 BV404_RS10475 780d80e46d945bd4ec66d8beb59b29ef 478 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 34 115 1.1E-14 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 BV404_RS10475 780d80e46d945bd4ec66d8beb59b29ef 478 SUPERFAMILY SSF55604 14 86 2.88E-20 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 BV404_RS10475 780d80e46d945bd4ec66d8beb59b29ef 478 Gene3D G3DSA:3.30.1360.60 10 87 1.4E-23 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 BV404_RS10475 780d80e46d945bd4ec66d8beb59b29ef 478 Pfam PF02378 Phosphotransferase system, EIIC 116 408 4.2E-32 T 09-03-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BV404_RS10475 780d80e46d945bd4ec66d8beb59b29ef 478 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 25 42 - T 09-03-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BV404_RS10130 95a811b040b1351298bf74b54e05e5e4 262 Gene3D G3DSA:2.40.40.10 118 169 1.2E-4 T 09-03-2017 IPR009009 RlpA-like protein, double-psi beta-barrel domain BV404_RS10130 95a811b040b1351298bf74b54e05e5e4 262 Gene3D G3DSA:3.30.70.1070 180 256 1.9E-10 T 09-03-2017 IPR007730 Sporulation-related domain GO:0042834 BV404_RS10130 95a811b040b1351298bf74b54e05e5e4 262 SUPERFAMILY SSF110997 186 257 4.58E-13 T 09-03-2017 IPR007730 Sporulation-related domain GO:0042834 BV404_RS10130 95a811b040b1351298bf74b54e05e5e4 262 Pfam PF03330 Lytic transglycolase 79 168 1.6E-28 T 09-03-2017 IPR009009 RlpA-like protein, double-psi beta-barrel domain BV404_RS10130 95a811b040b1351298bf74b54e05e5e4 262 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 81 177 1.2E-46 T 09-03-2017 IPR012997 Rare lipoprotein A BV404_RS10130 95a811b040b1351298bf74b54e05e5e4 262 Pfam PF05036 Sporulation related domain 187 255 3.0E-8 T 09-03-2017 IPR007730 Sporulation-related domain GO:0042834 BV404_RS10130 95a811b040b1351298bf74b54e05e5e4 262 SUPERFAMILY SSF50685 83 168 1.43E-10 T 09-03-2017 IPR009009 RlpA-like protein, double-psi beta-barrel domain BV404_RS04830 26940f7820363fbbb307e3f907666e30 160 SUPERFAMILY SSF46785 18 156 5.69E-30 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS04830 26940f7820363fbbb307e3f907666e30 160 SMART SM00347 44 145 7.7E-17 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BV404_RS04830 26940f7820363fbbb307e3f907666e30 160 Gene3D G3DSA:1.10.10.10 11 156 1.5E-35 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS04830 26940f7820363fbbb307e3f907666e30 160 Pfam PF12802 MarR family 49 109 2.7E-11 T 09-03-2017 BV404_RS04830 26940f7820363fbbb307e3f907666e30 160 ProSitePatterns PS01117 MarR-type HTH domain signature. 84 118 - T 09-03-2017 IPR023187 Transcriptional regulator MarR-type, conserved site BV404_RS04830 26940f7820363fbbb307e3f907666e30 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 135 155 7.2E-15 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BV404_RS04830 26940f7820363fbbb307e3f907666e30 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 85 7.2E-15 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BV404_RS04830 26940f7820363fbbb307e3f907666e30 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 101 7.2E-15 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BV404_RS04830 26940f7820363fbbb307e3f907666e30 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 105 121 7.2E-15 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BV404_RS07025 015a21f09aaad53fcdd834c8e5fee533 279 SUPERFAMILY SSF53927 15 266 7.52E-70 T 09-03-2017 IPR016193 Cytidine deaminase-like GO:0003824 BV404_RS07025 015a21f09aaad53fcdd834c8e5fee533 279 Pfam PF02634 FdhD/NarQ family 35 266 5.5E-73 T 09-03-2017 IPR003786 Protein FdhD GO:0016783 BV404_RS07025 015a21f09aaad53fcdd834c8e5fee533 279 Gene3D G3DSA:3.10.20.10 36 118 6.7E-16 T 09-03-2017 BV404_RS07025 015a21f09aaad53fcdd834c8e5fee533 279 Gene3D G3DSA:3.40.140.10 133 270 2.3E-52 T 09-03-2017 BV404_RS07025 015a21f09aaad53fcdd834c8e5fee533 279 Hamap MF_00187 Sulfurtransferase FdhD [fdhD]. 15 267 25.935 T 09-03-2017 IPR003786 Protein FdhD GO:0016783 BV404_RS07025 015a21f09aaad53fcdd834c8e5fee533 279 PIRSF PIRSF015626 1 271 6.8E-100 T 09-03-2017 IPR003786 Protein FdhD GO:0016783 BV404_RS12030 e2716ae9825ffcbaac9a1bfe0080c489 581 PIRSF PIRSF002811 2 580 1.8E-145 T 09-03-2017 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 BV404_RS12030 e2716ae9825ffcbaac9a1bfe0080c489 581 SUPERFAMILY SSF56731 122 429 1.57E-112 T 09-03-2017 BV404_RS12030 e2716ae9825ffcbaac9a1bfe0080c489 581 Gene3D G3DSA:3.90.580.10 2 101 1.4E-43 T 09-03-2017 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 BV404_RS12030 e2716ae9825ffcbaac9a1bfe0080c489 581 Gene3D G3DSA:3.40.1360.10 247 372 1.4E-44 T 09-03-2017 BV404_RS12030 e2716ae9825ffcbaac9a1bfe0080c489 581 SMART SM00766 451 576 4.5E-55 T 09-03-2017 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 BV404_RS12030 e2716ae9825ffcbaac9a1bfe0080c489 581 SUPERFAMILY SSF117023 448 580 1.57E-44 T 09-03-2017 BV404_RS12030 e2716ae9825ffcbaac9a1bfe0080c489 581 Gene3D G3DSA:3.90.980.10 122 246 1.0E-46 T 09-03-2017 IPR013264 DNA primase, catalytic core, N-terminal BV404_RS12030 e2716ae9825ffcbaac9a1bfe0080c489 581 SUPERFAMILY SSF57783 4 101 1.7E-38 T 09-03-2017 BV404_RS12030 e2716ae9825ffcbaac9a1bfe0080c489 581 SMART SM00400 36 90 2.0E-36 T 09-03-2017 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 BV404_RS12030 e2716ae9825ffcbaac9a1bfe0080c489 581 Hamap MF_00974 DNA primase [dnaG]. 4 577 29.547 T 09-03-2017 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 BV404_RS12030 e2716ae9825ffcbaac9a1bfe0080c489 581 Pfam PF08278 DNA primase DnaG DnaB-binding 452 575 2.7E-35 T 09-03-2017 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 BV404_RS12030 e2716ae9825ffcbaac9a1bfe0080c489 581 Pfam PF10410 DnaB-helicase binding domain of primase 376 427 5.5E-11 T 09-03-2017 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 BV404_RS12030 e2716ae9825ffcbaac9a1bfe0080c489 581 SMART SM00493 265 336 4.7E-20 T 09-03-2017 IPR006171 Toprim domain BV404_RS12030 e2716ae9825ffcbaac9a1bfe0080c489 581 Gene3D G3DSA:1.10.860.10 438 580 1.3E-54 T 09-03-2017 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal BV404_RS12030 e2716ae9825ffcbaac9a1bfe0080c489 581 Pfam PF08275 DNA primase catalytic core, N-terminal domain 132 256 3.7E-42 T 09-03-2017 IPR013264 DNA primase, catalytic core, N-terminal BV404_RS12030 e2716ae9825ffcbaac9a1bfe0080c489 581 Pfam PF13155 Toprim-like 269 355 3.3E-14 T 09-03-2017 BV404_RS12030 e2716ae9825ffcbaac9a1bfe0080c489 581 Gene3D G3DSA:1.20.50.20 374 428 4.6E-18 T 09-03-2017 BV404_RS12030 e2716ae9825ffcbaac9a1bfe0080c489 581 TIGRFAM TIGR01391 dnaG: DNA primase 5 424 1.0E-149 T 09-03-2017 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 BV404_RS12030 e2716ae9825ffcbaac9a1bfe0080c489 581 Pfam PF01807 CHC2 zinc finger 6 101 2.5E-41 T 09-03-2017 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 BV404_RS09485 acb0d250ee1cb041b1890e83b0ff33f5 134 Gene3D G3DSA:2.170.150.20 4 133 1.7E-60 T 09-03-2017 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 BV404_RS09485 acb0d250ee1cb041b1890e83b0ff33f5 134 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 10 131 1.1E-55 T 09-03-2017 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 BV404_RS09485 acb0d250ee1cb041b1890e83b0ff33f5 134 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 9 134 36.983 T 09-03-2017 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 BV404_RS09485 acb0d250ee1cb041b1890e83b0ff33f5 134 SUPERFAMILY SSF51316 9 133 1.46E-57 T 09-03-2017 IPR011057 Mss4-like BV404_RS09485 acb0d250ee1cb041b1890e83b0ff33f5 134 Pfam PF01641 SelR domain 15 132 2.0E-53 T 09-03-2017 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 BV404_RS01405 1bb1de28cd5574daa567491651dc3dcd 502 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 497 41.059 T 09-03-2017 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 BV404_RS01405 1bb1de28cd5574daa567491651dc3dcd 502 SUPERFAMILY SSF52949 1 184 1.94E-51 T 09-03-2017 BV404_RS01405 1bb1de28cd5574daa567491651dc3dcd 502 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 8.9E-34 T 09-03-2017 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 BV404_RS01405 1bb1de28cd5574daa567491651dc3dcd 502 Gene3D G3DSA:3.40.630.10 171 499 1.8E-140 T 09-03-2017 BV404_RS01405 1bb1de28cd5574daa567491651dc3dcd 502 Gene3D G3DSA:3.40.220.10 1 161 1.4E-67 T 09-03-2017 BV404_RS01405 1bb1de28cd5574daa567491651dc3dcd 502 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 349 356 - T 09-03-2017 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 BV404_RS01405 1bb1de28cd5574daa567491651dc3dcd 502 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 187 489 4.9E-120 T 09-03-2017 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 BV404_RS01405 1bb1de28cd5574daa567491651dc3dcd 502 PRINTS PR00481 Cytosol aminopeptidase signature 345 365 5.1E-55 T 09-03-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BV404_RS01405 1bb1de28cd5574daa567491651dc3dcd 502 PRINTS PR00481 Cytosol aminopeptidase signature 286 307 5.1E-55 T 09-03-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BV404_RS01405 1bb1de28cd5574daa567491651dc3dcd 502 PRINTS PR00481 Cytosol aminopeptidase signature 323 344 5.1E-55 T 09-03-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BV404_RS01405 1bb1de28cd5574daa567491651dc3dcd 502 PRINTS PR00481 Cytosol aminopeptidase signature 264 281 5.1E-55 T 09-03-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BV404_RS01405 1bb1de28cd5574daa567491651dc3dcd 502 PRINTS PR00481 Cytosol aminopeptidase signature 373 388 5.1E-55 T 09-03-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BV404_RS01405 1bb1de28cd5574daa567491651dc3dcd 502 SUPERFAMILY SSF53187 180 496 2.51E-126 T 09-03-2017 BV404_RS09825 d92cfdb4e6db6dbe122e1f2c95c71c82 138 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 3 136 1.9E-69 T 09-03-2017 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 BV404_RS09825 d92cfdb4e6db6dbe122e1f2c95c71c82 138 Gene3D G3DSA:3.10.180.10 5 131 2.1E-48 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BV404_RS09825 d92cfdb4e6db6dbe122e1f2c95c71c82 138 ProSitePatterns PS00935 Glyoxalase I signature 2. 72 84 - T 09-03-2017 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 BV404_RS09825 d92cfdb4e6db6dbe122e1f2c95c71c82 138 SUPERFAMILY SSF54593 2 130 1.88E-36 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BV404_RS09825 d92cfdb4e6db6dbe122e1f2c95c71c82 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 126 1.5E-23 T 09-03-2017 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BV404_RS09825 d92cfdb4e6db6dbe122e1f2c95c71c82 138 ProSitePatterns PS00934 Glyoxalase I signature 1. 8 29 - T 09-03-2017 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 BV404_RS09905 4d247238e051a77e3efd9cf5f1b1bff2 528 Gene3D G3DSA:3.40.50.720 381 526 3.1E-48 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS09905 4d247238e051a77e3efd9cf5f1b1bff2 528 SUPERFAMILY SSF51735 387 518 4.3E-15 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS09905 4d247238e051a77e3efd9cf5f1b1bff2 528 Pfam PF00999 Sodium/hydrogen exchanger family 4 347 2.8E-36 T 09-03-2017 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 BV404_RS09905 4d247238e051a77e3efd9cf5f1b1bff2 528 Pfam PF02254 TrkA-N domain 388 504 5.5E-19 T 09-03-2017 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 BV404_RS00230 eada611411fa60b2edb87b71aae8f7d5 147 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site BV404_RS00230 eada611411fa60b2edb87b71aae8f7d5 147 SUPERFAMILY SSF54523 36 142 8.89E-38 T 09-03-2017 BV404_RS00230 eada611411fa60b2edb87b71aae8f7d5 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 46 64 4.2E-22 T 09-03-2017 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 BV404_RS00230 eada611411fa60b2edb87b71aae8f7d5 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 10 35 4.2E-22 T 09-03-2017 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 BV404_RS00230 eada611411fa60b2edb87b71aae8f7d5 147 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 9 142 1.1E-57 T 09-03-2017 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 BV404_RS00230 eada611411fa60b2edb87b71aae8f7d5 147 Pfam PF08334 Type II secretion system (T2SS), protein G 33 141 1.1E-42 T 09-03-2017 IPR013545 Type II secretion system protein G BV404_RS00230 eada611411fa60b2edb87b71aae8f7d5 147 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 6 28 1.3E-8 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site BV404_RS00230 eada611411fa60b2edb87b71aae8f7d5 147 Gene3D G3DSA:3.30.700.10 11 77 5.3E-9 T 09-03-2017 BV404_RS00230 eada611411fa60b2edb87b71aae8f7d5 147 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 31 3.9E-9 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site BV404_RS06575 6d38533c51f8f8468debb92936ddf6ee 206 SUPERFAMILY SSF55811 43 195 5.69E-33 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 BV404_RS06575 6d38533c51f8f8468debb92936ddf6ee 206 Gene3D G3DSA:3.90.79.10 41 202 8.4E-38 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 BV404_RS06575 6d38533c51f8f8468debb92936ddf6ee 206 Pfam PF00293 NUDIX domain 52 149 2.4E-14 T 09-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 BV404_RS04270 ad46797245909bbe9bf88df4ffc83ced 267 Gene3D G3DSA:3.30.470.10 1 105 5.6E-32 T 09-03-2017 BV404_RS04270 ad46797245909bbe9bf88df4ffc83ced 267 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 263 8.0E-99 T 09-03-2017 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 BV404_RS04270 ad46797245909bbe9bf88df4ffc83ced 267 Gene3D G3DSA:3.20.10.10 124 261 5.9E-40 T 09-03-2017 BV404_RS04270 ad46797245909bbe9bf88df4ffc83ced 267 Pfam PF01063 Amino-transferase class IV 24 246 3.8E-44 T 09-03-2017 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 BV404_RS04270 ad46797245909bbe9bf88df4ffc83ced 267 SUPERFAMILY SSF56752 1 260 2.49E-67 T 09-03-2017 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 BV404_RS04270 ad46797245909bbe9bf88df4ffc83ced 267 ProSitePatterns PS00770 Aminotransferases class-IV signature. 173 202 - T 09-03-2017 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: R-HSA-70895 BV404_RS07375 598e8057a06e8613ad7d8e290c141ff8 418 Gene3D G3DSA:3.90.10.10 189 252 7.5E-5 T 09-03-2017 BV404_RS07375 598e8057a06e8613ad7d8e290c141ff8 418 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 13 404 1.1E-106 T 09-03-2017 IPR005219 Conserved hypothetical protein CHP00155 BV404_RS07375 598e8057a06e8613ad7d8e290c141ff8 418 Pfam PF04403 Paraquat-inducible protein A 56 207 4.1E-37 T 09-03-2017 IPR007498 Paraquat-inducible protein A BV404_RS07375 598e8057a06e8613ad7d8e290c141ff8 418 Pfam PF04403 Paraquat-inducible protein A 251 406 2.4E-47 T 09-03-2017 IPR007498 Paraquat-inducible protein A BV404_RS08285 3fac7bae249b62516bacb3f2076368bb 266 Pfam PF07722 Peptidase C26 10 225 7.9E-69 T 09-03-2017 IPR011697 Peptidase C26 GO:0006541|GO:0016787 BV404_RS08285 3fac7bae249b62516bacb3f2076368bb 266 SUPERFAMILY SSF52317 7 248 2.75E-41 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like BV404_RS08285 3fac7bae249b62516bacb3f2076368bb 266 Gene3D G3DSA:3.40.50.880 8 249 1.4E-51 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like BV404_RS14270 0ecab84452454b24eb75a67eec6b6021 301 SUPERFAMILY SSF53850 89 289 3.14E-25 T 09-03-2017 BV404_RS14270 0ecab84452454b24eb75a67eec6b6021 301 SUPERFAMILY SSF46785 5 87 2.65E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS14270 0ecab84452454b24eb75a67eec6b6021 301 Gene3D G3DSA:1.10.10.10 6 87 4.1E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS14270 0ecab84452454b24eb75a67eec6b6021 301 Gene3D G3DSA:3.40.190.10 169 255 1.1E-9 T 09-03-2017 BV404_RS14270 0ecab84452454b24eb75a67eec6b6021 301 Pfam PF03466 LysR substrate binding domain 89 288 8.3E-22 T 09-03-2017 IPR005119 LysR, substrate-binding BV404_RS14270 0ecab84452454b24eb75a67eec6b6021 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 6.8E-16 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS13710 8a45bf9961548824c705b2cf67773e53 266 SUPERFAMILY SSF51215 22 136 1.96E-17 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 BV404_RS13710 8a45bf9961548824c705b2cf67773e53 266 Pfam PF12833 Helix-turn-helix domain 188 263 7.4E-21 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BV404_RS13710 8a45bf9961548824c705b2cf67773e53 266 Gene3D G3DSA:1.10.10.60 165 219 3.7E-17 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS13710 8a45bf9961548824c705b2cf67773e53 266 Gene3D G3DSA:2.60.120.280 23 103 7.5E-13 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 BV404_RS13710 8a45bf9961548824c705b2cf67773e53 266 SUPERFAMILY SSF46689 219 263 2.87E-8 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS13710 8a45bf9961548824c705b2cf67773e53 266 Pfam PF02311 AraC-like ligand binding domain 13 142 9.0E-21 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 BV404_RS13710 8a45bf9961548824c705b2cf67773e53 266 Gene3D G3DSA:1.10.10.60 220 263 1.4E-11 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS13710 8a45bf9961548824c705b2cf67773e53 266 SMART SM00342 182 264 4.4E-23 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BV404_RS13710 8a45bf9961548824c705b2cf67773e53 266 SUPERFAMILY SSF46689 167 216 1.08E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS05010 cfc7b4a93a19c2a1af7e433d00d01d51 203 PIRSF PIRSF000005 1 203 1.2E-59 T 09-03-2017 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 BV404_RS05010 cfc7b4a93a19c2a1af7e433d00d01d51 203 SUPERFAMILY SSF46626 27 94 3.48E-16 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 BV404_RS05010 cfc7b4a93a19c2a1af7e433d00d01d51 203 SUPERFAMILY SSF46626 120 200 1.08E-20 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 BV404_RS05010 cfc7b4a93a19c2a1af7e433d00d01d51 203 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 133 197 5.0E-6 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 BV404_RS05010 cfc7b4a93a19c2a1af7e433d00d01d51 203 Pfam PF00034 Cytochrome c 29 79 2.1E-5 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 BV404_RS05010 cfc7b4a93a19c2a1af7e433d00d01d51 203 Gene3D G3DSA:1.10.760.10 30 130 1.7E-22 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 BV404_RS05010 cfc7b4a93a19c2a1af7e433d00d01d51 203 Gene3D G3DSA:1.10.760.10 131 200 1.5E-26 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 BV404_RS22240 298f866617ce8d9f08f8437bc697bc9f 530 SUPERFAMILY SSF55486 81 327 6.04E-75 T 09-03-2017 BV404_RS22240 298f866617ce8d9f08f8437bc697bc9f 530 Gene3D G3DSA:1.25.50.10 423 529 1.1E-29 T 09-03-2017 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal BV404_RS22240 298f866617ce8d9f08f8437bc697bc9f 530 Pfam PF01433 Peptidase family M1 2 261 1.2E-63 T 09-03-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BV404_RS22240 298f866617ce8d9f08f8437bc697bc9f 530 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 1 529 2.3E-268 T 09-03-2017 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 BV404_RS22240 298f866617ce8d9f08f8437bc697bc9f 530 Gene3D G3DSA:1.10.390.10 185 328 5.1E-33 T 09-03-2017 BV404_RS22240 298f866617ce8d9f08f8437bc697bc9f 530 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 135 145 4.7E-10 T 09-03-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BV404_RS22240 298f866617ce8d9f08f8437bc697bc9f 530 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 53 68 4.7E-10 T 09-03-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BV404_RS22240 298f866617ce8d9f08f8437bc697bc9f 530 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 190 202 4.7E-10 T 09-03-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BV404_RS22240 298f866617ce8d9f08f8437bc697bc9f 530 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 171 186 4.7E-10 T 09-03-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BV404_RS22240 298f866617ce8d9f08f8437bc697bc9f 530 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 3 18 4.7E-10 T 09-03-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BV404_RS22240 298f866617ce8d9f08f8437bc697bc9f 530 Pfam PF11940 Domain of unknown function (DUF3458) 335 530 8.0E-64 T 09-03-2017 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal BV404_RS22240 298f866617ce8d9f08f8437bc697bc9f 530 SUPERFAMILY SSF63737 1 70 5.62E-21 T 09-03-2017 BV404_RS11675 b22fd3c92ade3f0dc98a1da12b41d2e1 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 7.2E-157 T 09-03-2017 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BV404_RS11675 b22fd3c92ade3f0dc98a1da12b41d2e1 360 Pfam PF00953 Glycosyl transferase family 4 99 283 2.4E-37 T 09-03-2017 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 BV404_RS11675 b22fd3c92ade3f0dc98a1da12b41d2e1 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 1.0E-5 T 09-03-2017 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BV404_RS11675 b22fd3c92ade3f0dc98a1da12b41d2e1 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.498 T 09-03-2017 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BV404_RS11675 b22fd3c92ade3f0dc98a1da12b41d2e1 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 09-03-2017 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BV404_RS11675 b22fd3c92ade3f0dc98a1da12b41d2e1 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 09-03-2017 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BV404_RS03055 fdf33547a6db844b9b7556f33dd0dc46 208 Gene3D G3DSA:3.40.50.2020 2 208 8.0E-76 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like BV404_RS03055 fdf33547a6db844b9b7556f33dd0dc46 208 SUPERFAMILY SSF53271 3 206 3.54E-67 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like BV404_RS03055 fdf33547a6db844b9b7556f33dd0dc46 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 3.3E-65 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like BV404_RS03055 fdf33547a6db844b9b7556f33dd0dc46 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 2 208 6.5E-92 T 09-03-2017 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 BV404_RS03055 fdf33547a6db844b9b7556f33dd0dc46 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 44.554 T 09-03-2017 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 BV404_RS13945 355b724bd20ba568acf352c0c8de677c 161 SUPERFAMILY SSF52255 2 159 2.35E-65 T 09-03-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 BV404_RS13945 355b724bd20ba568acf352c0c8de677c 161 Gene3D G3DSA:3.40.50.7700 1 158 1.0E-72 T 09-03-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 BV404_RS13945 355b724bd20ba568acf352c0c8de677c 161 SMART SM01001 1 152 1.4E-101 T 09-03-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 BV404_RS13945 355b724bd20ba568acf352c0c8de677c 161 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 3 157 1.7E-65 T 09-03-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 BV404_RS13945 355b724bd20ba568acf352c0c8de677c 161 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 3 156 32.004 T 09-03-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 BV404_RS13945 355b724bd20ba568acf352c0c8de677c 161 PIRSF PIRSF001338 1 161 5.0E-67 T 09-03-2017 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 BV404_RS13945 355b724bd20ba568acf352c0c8de677c 161 Pfam PF00731 AIR carboxylase 2 150 4.5E-63 T 09-03-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 BV404_RS12125 967251c98a10856cb60bfc27eaf4866b 130 Gene3D G3DSA:2.40.160.20 2 130 4.2E-31 T 09-03-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 BV404_RS12125 967251c98a10856cb60bfc27eaf4866b 130 Pfam PF09411 Lipid A 3-O-deacylase (PagL) 11 128 6.5E-19 T 09-03-2017 IPR018550 Lipid A 3-O-deacylase-related BV404_RS02435 58e019b45ceb4f8312420a14b55f7b24 86 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.439 T 09-03-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS02435 58e019b45ceb4f8312420a14b55f7b24 86 SUPERFAMILY SSF46992 3 86 1.57E-32 T 09-03-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS02435 58e019b45ceb4f8312420a14b55f7b24 86 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 1.2E-31 T 09-03-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS02435 58e019b45ceb4f8312420a14b55f7b24 86 Gene3D G3DSA:1.20.58.110 3 86 2.2E-32 T 09-03-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS02435 58e019b45ceb4f8312420a14b55f7b24 86 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 86 2.0E-28 T 09-03-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS02435 58e019b45ceb4f8312420a14b55f7b24 86 Pfam PF01649 Ribosomal protein S20 2 84 1.4E-28 T 09-03-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS02985 f10bb8e68f83cbfe173c2e292e85e416 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 09-03-2017 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 BV404_RS02985 f10bb8e68f83cbfe173c2e292e85e416 112 SMART SM00938 4 105 7.6E-70 T 09-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BV404_RS02985 f10bb8e68f83cbfe173c2e292e85e416 112 PIRSF PIRSF039144 1 112 1.4E-58 T 09-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BV404_RS02985 f10bb8e68f83cbfe173c2e292e85e416 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 09-03-2017 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 BV404_RS02985 f10bb8e68f83cbfe173c2e292e85e416 112 Gene3D G3DSA:3.30.70.120 1 112 4.0E-52 T 09-03-2017 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BV404_RS02985 f10bb8e68f83cbfe173c2e292e85e416 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 5.2E-45 T 09-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BV404_RS02985 f10bb8e68f83cbfe173c2e292e85e416 112 PRINTS PR00340 P-II protein signature 83 103 5.3E-44 T 09-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BV404_RS02985 f10bb8e68f83cbfe173c2e292e85e416 112 PRINTS PR00340 P-II protein signature 52 75 5.3E-44 T 09-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BV404_RS02985 f10bb8e68f83cbfe173c2e292e85e416 112 PRINTS PR00340 P-II protein signature 23 41 5.3E-44 T 09-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BV404_RS02985 f10bb8e68f83cbfe173c2e292e85e416 112 PRINTS PR00340 P-II protein signature 2 17 5.3E-44 T 09-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BV404_RS02985 f10bb8e68f83cbfe173c2e292e85e416 112 SUPERFAMILY SSF54913 1 112 2.29E-47 T 09-03-2017 IPR011322 Nitrogen regulatory PII-like, alpha/beta BV404_RS12565 2e4b6aa5480b60977b27d4ceb933adb1 1124 Gene3D G3DSA:2.60.40.920 412 508 1.4E-4 T 09-03-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain BV404_RS05080 059ba0112357c2ec049d5c001dd5d8b0 206 Pfam PF02525 Flavodoxin-like fold 5 172 1.2E-46 T 09-03-2017 IPR003680 Flavodoxin-like fold BV404_RS05080 059ba0112357c2ec049d5c001dd5d8b0 206 SUPERFAMILY SSF52218 5 180 4.0E-51 T 09-03-2017 IPR029039 Flavoprotein-like domain BV404_RS05080 059ba0112357c2ec049d5c001dd5d8b0 206 Gene3D G3DSA:3.40.50.360 5 177 1.3E-51 T 09-03-2017 IPR029039 Flavoprotein-like domain BV404_RS04755 ab83042796c5533478a3ac9fe1755019 100 Gene3D G3DSA:1.10.10.10 2 86 8.3E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS04755 ab83042796c5533478a3ac9fe1755019 100 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 4 83 2.5E-23 T 09-03-2017 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 BV404_RS04755 ab83042796c5533478a3ac9fe1755019 100 SUPERFAMILY SSF46767 2 84 5.89E-25 T 09-03-2017 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 BV404_RS10150 b12beb07c6bd7530764bfe7eced94b21 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 321 1.5E-150 T 09-03-2017 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 BV404_RS10150 b12beb07c6bd7530764bfe7eced94b21 321 Pfam PF04055 Radical SAM superfamily 91 251 1.2E-18 T 09-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 BV404_RS10150 b12beb07c6bd7530764bfe7eced94b21 321 PIRSF PIRSF005963 1 320 1.7E-129 T 09-03-2017 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 BV404_RS10150 b12beb07c6bd7530764bfe7eced94b21 321 SUPERFAMILY SSF102114 52 316 1.28E-68 T 09-03-2017 BV404_RS10150 b12beb07c6bd7530764bfe7eced94b21 321 SMART SM00729 84 293 7.2E-20 T 09-03-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 BV404_RS10150 b12beb07c6bd7530764bfe7eced94b21 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 155.524 T 09-03-2017 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 BV404_RS10150 b12beb07c6bd7530764bfe7eced94b21 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 26 73 2.6E-8 T 09-03-2017 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 BV404_RS10150 b12beb07c6bd7530764bfe7eced94b21 321 Gene3D G3DSA:3.20.20.70 53 313 3.3E-71 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS01680 1f2a5fc95d64a48c22cc77b9d8dca0db 394 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 8 390 2.8E-151 T 09-03-2017 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 BV404_RS01680 1f2a5fc95d64a48c22cc77b9d8dca0db 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 2.7E-10 T 09-03-2017 BV404_RS01680 1f2a5fc95d64a48c22cc77b9d8dca0db 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 160 175 2.7E-10 T 09-03-2017 BV404_RS01680 1f2a5fc95d64a48c22cc77b9d8dca0db 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 284 299 2.7E-10 T 09-03-2017 BV404_RS01680 1f2a5fc95d64a48c22cc77b9d8dca0db 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 299 315 2.7E-10 T 09-03-2017 BV404_RS01680 1f2a5fc95d64a48c22cc77b9d8dca0db 394 SUPERFAMILY SSF51905 7 181 1.95E-51 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS01680 1f2a5fc95d64a48c22cc77b9d8dca0db 394 SUPERFAMILY SSF51905 271 384 1.95E-51 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS01680 1f2a5fc95d64a48c22cc77b9d8dca0db 394 Pfam PF01494 FAD binding domain 7 321 6.3E-26 T 09-03-2017 IPR002938 FAD-binding domain GO:0071949 BV404_RS01680 1f2a5fc95d64a48c22cc77b9d8dca0db 394 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 298 311 - T 09-03-2017 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 BV404_RS01680 1f2a5fc95d64a48c22cc77b9d8dca0db 394 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 8 389 4.4E-124 T 09-03-2017 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 BV404_RS01680 1f2a5fc95d64a48c22cc77b9d8dca0db 394 Gene3D G3DSA:3.50.50.60 6 186 2.7E-34 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS01680 1f2a5fc95d64a48c22cc77b9d8dca0db 394 Gene3D G3DSA:3.50.50.60 272 356 2.7E-34 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS12555 60c86a64b600f6a2c1024e7d56197503 295 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 280 2.2E-89 T 09-03-2017 IPR007221 Rod shape-determining protein MreC GO:0008360 BV404_RS12555 60c86a64b600f6a2c1024e7d56197503 295 PIRSF PIRSF038471 2 284 2.9E-81 T 09-03-2017 IPR007221 Rod shape-determining protein MreC GO:0008360 BV404_RS12555 60c86a64b600f6a2c1024e7d56197503 295 Pfam PF04085 rod shape-determining protein MreC 123 269 3.4E-41 T 09-03-2017 IPR007221 Rod shape-determining protein MreC GO:0008360 BV404_RS05640 4f142858165fcae867d14dabbcfc0f73 134 Pfam PF00816 H-NS histone family 37 128 2.3E-18 T 09-03-2017 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 BV404_RS05640 4f142858165fcae867d14dabbcfc0f73 134 SUPERFAMILY SSF81273 94 133 1.26E-9 T 09-03-2017 BV404_RS05640 4f142858165fcae867d14dabbcfc0f73 134 Gene3D G3DSA:4.10.430.10 92 134 7.3E-23 T 09-03-2017 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 BV404_RS05640 4f142858165fcae867d14dabbcfc0f73 134 SUPERFAMILY SSF81273 2 58 1.75E-16 T 09-03-2017 BV404_RS05640 4f142858165fcae867d14dabbcfc0f73 134 SMART SM00528 88 134 7.5E-22 T 09-03-2017 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 BV404_RS05640 4f142858165fcae867d14dabbcfc0f73 134 PIRSF PIRSF002096 1 134 1.7E-53 T 09-03-2017 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 BV404_RS05640 4f142858165fcae867d14dabbcfc0f73 134 Gene3D G3DSA:1.10.287.1050 1 58 4.8E-19 T 09-03-2017 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 BV404_RS12000 1ac5cc62941ddd76a69e23daf194aade 117 Gene3D G3DSA:3.30.1130.10 1 115 3.7E-43 T 09-03-2017 BV404_RS12000 1ac5cc62941ddd76a69e23daf194aade 117 TIGRFAM TIGR00526 folB_dom: FolB domain 1 115 2.0E-37 T 09-03-2017 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 BV404_RS12000 1ac5cc62941ddd76a69e23daf194aade 117 SUPERFAMILY SSF55620 1 115 3.39E-37 T 09-03-2017 BV404_RS12000 1ac5cc62941ddd76a69e23daf194aade 117 SMART SM00905 4 114 2.5E-49 T 09-03-2017 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 BV404_RS12000 1ac5cc62941ddd76a69e23daf194aade 117 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 114 1.5E-29 T 09-03-2017 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 BV404_RS12000 1ac5cc62941ddd76a69e23daf194aade 117 Pfam PF02152 Dihydroneopterin aldolase 4 113 1.3E-32 T 09-03-2017 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 BV404_RS10025 e3adb3a842b22d07f7a4853922a5e3c6 287 Hamap MF_00509 Cell division protein ZipA [zipA]. 2 279 22.323 T 09-03-2017 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 BV404_RS10025 e3adb3a842b22d07f7a4853922a5e3c6 287 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 150 285 4.0E-67 T 09-03-2017 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 BV404_RS10025 e3adb3a842b22d07f7a4853922a5e3c6 287 SMART SM00771 147 277 5.3E-70 T 09-03-2017 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 BV404_RS10025 e3adb3a842b22d07f7a4853922a5e3c6 287 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 3 277 3.0E-84 T 09-03-2017 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 BV404_RS10025 e3adb3a842b22d07f7a4853922a5e3c6 287 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 149 276 2.0E-45 T 09-03-2017 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 BV404_RS10025 e3adb3a842b22d07f7a4853922a5e3c6 287 Gene3D G3DSA:3.30.1400.10 146 283 5.4E-57 T 09-03-2017 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 BV404_RS10025 e3adb3a842b22d07f7a4853922a5e3c6 287 SUPERFAMILY SSF64383 149 283 1.22E-47 T 09-03-2017 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 BV404_RS11815 d0b878a803ce2a540ff656604aff1add 460 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 2.6E-22 T 09-03-2017 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BV404_RS11815 d0b878a803ce2a540ff656604aff1add 460 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 3.5E-179 T 09-03-2017 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 BV404_RS11815 d0b878a803ce2a540ff656604aff1add 460 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 09-03-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BV404_RS11815 d0b878a803ce2a540ff656604aff1add 460 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 3.2E-74 T 09-03-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BV404_RS11815 d0b878a803ce2a540ff656604aff1add 460 SMART SM00963 1 86 1.4E-36 T 09-03-2017 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BV404_RS11815 d0b878a803ce2a540ff656604aff1add 460 SMART SM00382 99 247 1.4E-9 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS11815 d0b878a803ce2a540ff656604aff1add 460 Gene3D G3DSA:1.10.260.30 329 432 1.7E-41 T 09-03-2017 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 BV404_RS11815 d0b878a803ce2a540ff656604aff1add 460 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 34.306 T 09-03-2017 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 BV404_RS11815 d0b878a803ce2a540ff656604aff1add 460 Pfam PF02978 Signal peptide binding domain 329 427 2.1E-33 T 09-03-2017 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 BV404_RS11815 d0b878a803ce2a540ff656604aff1add 460 SUPERFAMILY SSF47446 329 430 3.27E-38 T 09-03-2017 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 BV404_RS11815 d0b878a803ce2a540ff656604aff1add 460 Gene3D G3DSA:1.20.120.140 2 89 1.5E-35 T 09-03-2017 BV404_RS11815 d0b878a803ce2a540ff656604aff1add 460 SMART SM00962 100 296 1.7E-114 T 09-03-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BV404_RS11815 d0b878a803ce2a540ff656604aff1add 460 SUPERFAMILY SSF52540 42 353 9.03E-57 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11815 d0b878a803ce2a540ff656604aff1add 460 Gene3D G3DSA:3.40.50.300 93 297 1.7E-77 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS14560 f5a2e2ec7bf5c2858ae4ef8475c534f5 80 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 75 24.854 T 09-03-2017 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 BV404_RS14560 f5a2e2ec7bf5c2858ae4ef8475c534f5 80 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 4.1E-22 T 09-03-2017 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 BV404_RS14560 f5a2e2ec7bf5c2858ae4ef8475c534f5 80 Pfam PF02416 mttA/Hcf106 family 4 55 8.1E-15 T 09-03-2017 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 BV404_RS12660 a5e93b43e24bb500f292eb26fba45ad3 289 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 263 5.0E-125 T 09-03-2017 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 BV404_RS12660 a5e93b43e24bb500f292eb26fba45ad3 289 SUPERFAMILY SSF53448 2 270 6.47E-64 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases BV404_RS12660 a5e93b43e24bb500f292eb26fba45ad3 289 Gene3D G3DSA:3.90.550.10 3 271 1.7E-66 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases BV404_RS12660 a5e93b43e24bb500f292eb26fba45ad3 289 Pfam PF00483 Nucleotidyl transferase 9 265 8.9E-32 T 09-03-2017 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 BV404_RS01995 10d5f8c2df6b47260dbaad8744134f5e 305 SMART SM00382 29 212 2.6E-14 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS01995 10d5f8c2df6b47260dbaad8744134f5e 305 SUPERFAMILY SSF52540 3 232 1.09E-63 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS01995 10d5f8c2df6b47260dbaad8744134f5e 305 Pfam PF00005 ABC transporter 20 164 2.5E-35 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS01995 10d5f8c2df6b47260dbaad8744134f5e 305 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS01995 10d5f8c2df6b47260dbaad8744134f5e 305 Gene3D G3DSA:3.40.50.300 3 225 2.1E-70 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS06805 ca6cfd6d3a49cc9dc661ad9ae16f4462 345 SUPERFAMILY SSF56529 77 335 1.7E-56 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 BV404_RS06805 ca6cfd6d3a49cc9dc661ad9ae16f4462 345 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 82 334 1.9E-40 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 BV404_RS06805 ca6cfd6d3a49cc9dc661ad9ae16f4462 345 Gene3D G3DSA:3.90.850.10 306 317 7.1E-39 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 BV404_RS06805 ca6cfd6d3a49cc9dc661ad9ae16f4462 345 Gene3D G3DSA:3.90.850.10 67 270 7.1E-39 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 BV404_RS18055 48c6e7c2e6aa1ea552b772015fd1c71d 110 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 99 2.6E-29 T 09-03-2017 IPR020013 Fagellar hook-basal body protein, FlgE/F/G BV404_RS18055 48c6e7c2e6aa1ea552b772015fd1c71d 110 SUPERFAMILY SSF117143 52 109 2.62E-15 T 09-03-2017 BV404_RS12325 6ce07d16cd3d397a089a1336330bf074 211 SMART SM00478 52 209 5.3E-4 T 09-03-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 BV404_RS12325 6ce07d16cd3d397a089a1336330bf074 211 SUPERFAMILY SSF48150 43 200 2.97E-26 T 09-03-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 BV404_RS12325 6ce07d16cd3d397a089a1336330bf074 211 Gene3D G3DSA:1.10.340.30 44 153 5.9E-21 T 09-03-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 BV404_RS12325 6ce07d16cd3d397a089a1336330bf074 211 Gene3D G3DSA:1.10.1670.10 154 202 1.9E-4 T 09-03-2017 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 BV404_RS02870 5599e2922249a254cc5360371d22adfe 168 SUPERFAMILY SSF101307 8 160 1.7E-47 T 09-03-2017 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 BV404_RS02870 5599e2922249a254cc5360371d22adfe 168 Pfam PF04608 Phosphatidylglycerophosphatase A 15 159 9.0E-53 T 09-03-2017 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 BV404_RS02870 5599e2922249a254cc5360371d22adfe 168 PIRSF PIRSF006162 4 166 2.0E-54 T 09-03-2017 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668 BV404_RS08990 4374c00afd9cddc130c2dc92f4afff8d 720 Pfam PF13567 Domain of unknown function (DUF4131) 8 148 5.0E-9 T 09-03-2017 IPR025405 Domain of unknown function DUF4131 BV404_RS08990 4374c00afd9cddc130c2dc92f4afff8d 720 Pfam PF03772 Competence protein 183 435 9.3E-56 T 09-03-2017 IPR004477 ComEC/Rec2-related protein BV404_RS08990 4374c00afd9cddc130c2dc92f4afff8d 720 SUPERFAMILY SSF56281 462 699 9.21E-42 T 09-03-2017 IPR001279 Metallo-beta-lactamase BV404_RS08990 4374c00afd9cddc130c2dc92f4afff8d 720 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 205 377 6.0E-29 T 09-03-2017 IPR004477 ComEC/Rec2-related protein BV404_RS08990 4374c00afd9cddc130c2dc92f4afff8d 720 Gene3D G3DSA:3.60.15.10 461 683 2.0E-26 T 09-03-2017 IPR001279 Metallo-beta-lactamase BV404_RS08990 4374c00afd9cddc130c2dc92f4afff8d 720 SMART SM00849 474 657 4.6E-8 T 09-03-2017 IPR001279 Metallo-beta-lactamase BV404_RS08990 4374c00afd9cddc130c2dc92f4afff8d 720 Pfam PF00753 Metallo-beta-lactamase superfamily 472 652 1.5E-9 T 09-03-2017 IPR001279 Metallo-beta-lactamase BV404_RS08990 4374c00afd9cddc130c2dc92f4afff8d 720 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 104 686 4.2E-125 T 09-03-2017 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 BV404_RS00345 5d9c02b9206e85f3f9436bc4b268fc73 435 Pfam PF00672 HAMP domain 158 222 5.1E-14 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 BV404_RS00345 5d9c02b9206e85f3f9436bc4b268fc73 435 Gene3D G3DSA:3.30.565.10 289 434 8.3E-36 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS00345 5d9c02b9206e85f3f9436bc4b268fc73 435 Pfam PF00512 His Kinase A (phospho-acceptor) domain 230 281 3.2E-9 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS00345 5d9c02b9206e85f3f9436bc4b268fc73 435 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 327 433 5.4E-21 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS00345 5d9c02b9206e85f3f9436bc4b268fc73 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 391 5.5E-13 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS00345 5d9c02b9206e85f3f9436bc4b268fc73 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 363 377 5.5E-13 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS00345 5d9c02b9206e85f3f9436bc4b268fc73 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 414 5.5E-13 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS00345 5d9c02b9206e85f3f9436bc4b268fc73 435 SMART SM00388 227 287 1.7E-9 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS00345 5d9c02b9206e85f3f9436bc4b268fc73 435 SUPERFAMILY SSF55874 289 434 7.2E-36 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS00345 5d9c02b9206e85f3f9436bc4b268fc73 435 SMART SM00387 326 435 1.2E-29 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS00345 5d9c02b9206e85f3f9436bc4b268fc73 435 Gene3D G3DSA:1.10.287.130 218 281 1.4E-18 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS00345 5d9c02b9206e85f3f9436bc4b268fc73 435 SUPERFAMILY SSF47384 221 282 1.71E-11 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS00345 5d9c02b9206e85f3f9436bc4b268fc73 435 SMART SM00304 174 226 6.9E-9 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 BV404_RS09685 d46ff8ad04dcf19f19071e8f4002569b 170 Pfam PF00994 Probable molybdopterin binding domain 14 155 1.3E-35 T 09-03-2017 IPR001453 MoaB/Mog domain BV404_RS09685 d46ff8ad04dcf19f19071e8f4002569b 170 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 12 152 2.1E-38 T 09-03-2017 IPR001453 MoaB/Mog domain BV404_RS09685 d46ff8ad04dcf19f19071e8f4002569b 170 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 7 168 2.6E-85 T 09-03-2017 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 BV404_RS09685 d46ff8ad04dcf19f19071e8f4002569b 170 SMART SM00852 14 158 2.7E-30 T 09-03-2017 IPR001453 MoaB/Mog domain BV404_RS09685 d46ff8ad04dcf19f19071e8f4002569b 170 SUPERFAMILY SSF53218 7 168 3.4E-48 T 09-03-2017 IPR001453 MoaB/Mog domain BV404_RS09685 d46ff8ad04dcf19f19071e8f4002569b 170 PIRSF PIRSF006443 1 166 1.0E-66 T 09-03-2017 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 BV404_RS09685 d46ff8ad04dcf19f19071e8f4002569b 170 Gene3D G3DSA:3.40.980.10 6 166 2.4E-51 T 09-03-2017 IPR001453 MoaB/Mog domain BV404_RS09685 d46ff8ad04dcf19f19071e8f4002569b 170 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 72 85 - T 09-03-2017 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 BV404_RS02790 de3b7a40c87d05bdb7c5c69b74a5f20c 338 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 48 323 5.9E-45 T 09-03-2017 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 BV404_RS05235 1ff20064cb84d548804b75b24ffc050e 511 Gene3D G3DSA:1.20.1250.20 271 431 5.9E-16 T 09-03-2017 BV404_RS05235 1ff20064cb84d548804b75b24ffc050e 511 Gene3D G3DSA:1.20.1250.20 480 503 5.9E-16 T 09-03-2017 BV404_RS05235 1ff20064cb84d548804b75b24ffc050e 511 SUPERFAMILY SSF103473 257 427 1.96E-60 T 09-03-2017 IPR020846 Major facilitator superfamily domain BV404_RS05235 1ff20064cb84d548804b75b24ffc050e 511 SUPERFAMILY SSF103473 475 503 1.96E-60 T 09-03-2017 IPR020846 Major facilitator superfamily domain BV404_RS05235 1ff20064cb84d548804b75b24ffc050e 511 SUPERFAMILY SSF103473 22 208 1.96E-60 T 09-03-2017 IPR020846 Major facilitator superfamily domain BV404_RS05235 1ff20064cb84d548804b75b24ffc050e 511 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 22 498 6.6E-128 T 09-03-2017 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 BV404_RS05235 1ff20064cb84d548804b75b24ffc050e 511 Gene3D G3DSA:1.20.1250.20 22 198 1.5E-30 T 09-03-2017 BV404_RS05235 1ff20064cb84d548804b75b24ffc050e 511 Pfam PF07690 Major Facilitator Superfamily 24 417 4.6E-52 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BV404_RS06095 956060140aa7f96aa4f4a523be1d425a 566 SUPERFAMILY SSF161098 301 538 2.09E-25 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS06095 956060140aa7f96aa4f4a523be1d425a 566 Gene3D G3DSA:1.10.3720.10 301 546 3.3E-22 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS06095 956060140aa7f96aa4f4a523be1d425a 566 Gene3D G3DSA:1.10.3720.10 4 275 6.2E-23 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS06095 956060140aa7f96aa4f4a523be1d425a 566 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 365 538 8.6E-6 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS06095 956060140aa7f96aa4f4a523be1d425a 566 SUPERFAMILY SSF161098 7 271 2.75E-26 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS00265 7423ea76e63073bbaff377d93fd1d11c 252 Pfam PF01203 Type II secretion system (T2SS), protein N 37 246 1.7E-56 T 09-03-2017 IPR022792 Type II secretion system, protein N BV404_RS09975 e2d94c2a1d08846a18f9ac01be33e92b 244 Pfam PF07556 Protein of unknown function (DUF1538) 21 242 3.8E-72 T 09-03-2017 IPR011435 Protein of unknown function DUF1538 BV404_RS14265 69b3404e5112c34cd8450ee881a43a05 400 Pfam PF07690 Major Facilitator Superfamily 13 340 6.9E-37 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BV404_RS14265 69b3404e5112c34cd8450ee881a43a05 400 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 8 371 9.5E-82 T 09-03-2017 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 BV404_RS14265 69b3404e5112c34cd8450ee881a43a05 400 Gene3D G3DSA:1.20.1250.20 197 376 8.8E-13 T 09-03-2017 BV404_RS14265 69b3404e5112c34cd8450ee881a43a05 400 SUPERFAMILY SSF103473 6 382 5.23E-54 T 09-03-2017 IPR020846 Major facilitator superfamily domain BV404_RS14265 69b3404e5112c34cd8450ee881a43a05 400 Gene3D G3DSA:1.20.1250.20 8 177 2.7E-23 T 09-03-2017 BV404_RS05025 bf6a3737549044a688c406a4cd4f452d 733 SMART SM01079 298 477 6.5E-23 T 09-03-2017 IPR006189 CHASE domain BV404_RS05025 bf6a3737549044a688c406a4cd4f452d 733 Gene3D G3DSA:3.30.70.270 576 732 9.1E-55 T 09-03-2017 BV404_RS05025 bf6a3737549044a688c406a4cd4f452d 733 Pfam PF17159 Membrane-associated sensor domain 29 246 1.0E-58 T 09-03-2017 IPR033425 Membrane-associated sensor domain MASE3 BV404_RS05025 bf6a3737549044a688c406a4cd4f452d 733 SUPERFAMILY SSF55073 579 732 3.14E-51 T 09-03-2017 IPR029787 Nucleotide cyclase BV404_RS05025 bf6a3737549044a688c406a4cd4f452d 733 Pfam PF00990 Diguanylate cyclase, GGDEF domain 574 728 1.2E-47 T 09-03-2017 IPR000160 GGDEF domain BV404_RS05025 bf6a3737549044a688c406a4cd4f452d 733 Pfam PF03924 CHASE domain 360 459 2.8E-12 T 09-03-2017 IPR006189 CHASE domain BV404_RS05025 bf6a3737549044a688c406a4cd4f452d 733 SMART SM00267 562 733 6.5E-62 T 09-03-2017 IPR000160 GGDEF domain BV404_RS05025 bf6a3737549044a688c406a4cd4f452d 733 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 572 732 2.7E-49 T 09-03-2017 IPR000160 GGDEF domain BV404_RS09370 86f918c8ce8a84806d37dda552e60e66 286 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 37.704 T 09-03-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 BV404_RS09370 86f918c8ce8a84806d37dda552e60e66 286 SUPERFAMILY SSF51735 123 280 2.16E-50 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS09370 86f918c8ce8a84806d37dda552e60e66 286 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 121 2.9E-38 T 09-03-2017 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 BV404_RS09370 86f918c8ce8a84806d37dda552e60e66 286 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 09-03-2017 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 BV404_RS09370 86f918c8ce8a84806d37dda552e60e66 286 Gene3D G3DSA:3.40.50.720 141 264 2.4E-51 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS09370 86f918c8ce8a84806d37dda552e60e66 286 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 3.1E-67 T 09-03-2017 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 BV404_RS09370 86f918c8ce8a84806d37dda552e60e66 286 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 09-03-2017 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 BV404_RS09370 86f918c8ce8a84806d37dda552e60e66 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 8.7E-88 T 09-03-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 BV404_RS09370 86f918c8ce8a84806d37dda552e60e66 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 8.7E-88 T 09-03-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 BV404_RS09370 86f918c8ce8a84806d37dda552e60e66 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 8.7E-88 T 09-03-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 BV404_RS09370 86f918c8ce8a84806d37dda552e60e66 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 8.7E-88 T 09-03-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 BV404_RS09370 86f918c8ce8a84806d37dda552e60e66 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 8.7E-88 T 09-03-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 BV404_RS09370 86f918c8ce8a84806d37dda552e60e66 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 8.7E-88 T 09-03-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 BV404_RS09370 86f918c8ce8a84806d37dda552e60e66 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 8.7E-88 T 09-03-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 BV404_RS09370 86f918c8ce8a84806d37dda552e60e66 286 SUPERFAMILY SSF53223 1 122 6.04E-39 T 09-03-2017 BV404_RS09370 86f918c8ce8a84806d37dda552e60e66 286 Gene3D G3DSA:3.40.192.10 7 140 1.4E-49 T 09-03-2017 BV404_RS04130 1776950346d8bcdaa411f867b2f03bfa 306 Gene3D G3DSA:3.40.800.20 2 285 3.8E-64 T 09-03-2017 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 BV404_RS04130 1776950346d8bcdaa411f867b2f03bfa 306 SUPERFAMILY SSF52768 3 286 2.06E-78 T 09-03-2017 BV404_RS04130 1776950346d8bcdaa411f867b2f03bfa 306 Pfam PF00850 Histone deacetylase domain 39 285 4.8E-48 T 09-03-2017 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 BV404_RS04130 1776950346d8bcdaa411f867b2f03bfa 306 PRINTS PR01270 Histone deacetylase superfamily signature 121 144 1.8E-16 T 09-03-2017 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 BV404_RS04130 1776950346d8bcdaa411f867b2f03bfa 306 PRINTS PR01270 Histone deacetylase superfamily signature 155 170 1.8E-16 T 09-03-2017 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 BV404_RS04130 1776950346d8bcdaa411f867b2f03bfa 306 PRINTS PR01270 Histone deacetylase superfamily signature 229 239 1.8E-16 T 09-03-2017 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 BV404_RS01015 d98192599e31cf1ef0520323cba18254 117 Gene3D G3DSA:3.30.420.100 24 117 2.2E-35 T 09-03-2017 BV404_RS01015 d98192599e31cf1ef0520323cba18254 117 SUPERFAMILY SSF53137 3 115 1.57E-50 T 09-03-2017 BV404_RS01015 d98192599e31cf1ef0520323cba18254 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 25.656 T 09-03-2017 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS01015 d98192599e31cf1ef0520323cba18254 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 1.9E-42 T 09-03-2017 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS01015 d98192599e31cf1ef0520323cba18254 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 4.7E-43 T 09-03-2017 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS09240 fdc733514e80c29c85c1b990260b5cda 395 SUPERFAMILY SSF52743 123 368 1.57E-51 T 09-03-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BV404_RS09240 fdc733514e80c29c85c1b990260b5cda 395 Pfam PF05922 Peptidase inhibitor I9 32 101 1.1E-4 T 09-03-2017 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 BV404_RS09240 fdc733514e80c29c85c1b990260b5cda 395 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 356 366 - T 09-03-2017 IPR023828 Peptidase S8, subtilisin, Ser-active site BV404_RS09240 fdc733514e80c29c85c1b990260b5cda 395 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 143 154 - T 09-03-2017 IPR023827 Peptidase S8, subtilisin, Asp-active site BV404_RS09240 fdc733514e80c29c85c1b990260b5cda 395 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 181 191 - T 09-03-2017 IPR022398 Peptidase S8, subtilisin, His-active site BV404_RS09240 fdc733514e80c29c85c1b990260b5cda 395 PRINTS PR00723 Subtilisin serine protease family (S8) signature 355 371 4.6E-16 T 09-03-2017 IPR015500 Peptidase S8, subtilisin-related BV404_RS09240 fdc733514e80c29c85c1b990260b5cda 395 PRINTS PR00723 Subtilisin serine protease family (S8) signature 138 157 4.6E-16 T 09-03-2017 IPR015500 Peptidase S8, subtilisin-related BV404_RS09240 fdc733514e80c29c85c1b990260b5cda 395 PRINTS PR00723 Subtilisin serine protease family (S8) signature 177 190 4.6E-16 T 09-03-2017 IPR015500 Peptidase S8, subtilisin-related BV404_RS09240 fdc733514e80c29c85c1b990260b5cda 395 Pfam PF00082 Subtilase family 145 368 7.5E-31 T 09-03-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BV404_RS09240 fdc733514e80c29c85c1b990260b5cda 395 SUPERFAMILY SSF54897 30 101 6.8E-12 T 09-03-2017 IPR009020 Proteinase propeptide inhibitor BV404_RS09240 fdc733514e80c29c85c1b990260b5cda 395 Gene3D G3DSA:3.30.70.80 32 94 1.4E-14 T 09-03-2017 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 BV404_RS09240 fdc733514e80c29c85c1b990260b5cda 395 Gene3D G3DSA:3.40.50.200 95 368 2.2E-58 T 09-03-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BV404_RS07645 9e53535592b037bfe54fc8c5b7243d03 109 PIRSF PIRSF006223 2 109 2.8E-41 T 09-03-2017 IPR007453 Sulphur transfer protein DsrC/TusE BV404_RS07645 9e53535592b037bfe54fc8c5b7243d03 109 SUPERFAMILY SSF69721 2 109 4.71E-40 T 09-03-2017 IPR025526 DsrC-like domain BV404_RS07645 9e53535592b037bfe54fc8c5b7243d03 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 3 109 5.9E-48 T 09-03-2017 IPR007453 Sulphur transfer protein DsrC/TusE BV404_RS07645 9e53535592b037bfe54fc8c5b7243d03 109 Gene3D G3DSA:3.30.1420.10 1 39 1.6E-12 T 09-03-2017 BV404_RS07645 9e53535592b037bfe54fc8c5b7243d03 109 Gene3D G3DSA:1.10.10.370 40 109 1.5E-36 T 09-03-2017 BV404_RS07645 9e53535592b037bfe54fc8c5b7243d03 109 Pfam PF04358 DsrC like protein 3 109 2.9E-43 T 09-03-2017 IPR007453 Sulphur transfer protein DsrC/TusE BV404_RS01980 b1a629c70414d5e8342cd46603abe5f5 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 67 3.9E-12 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BV404_RS01980 b1a629c70414d5e8342cd46603abe5f5 205 Gene3D G3DSA:1.10.357.10 17 199 1.6E-30 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 BV404_RS01980 b1a629c70414d5e8342cd46603abe5f5 205 SUPERFAMILY SSF48498 91 198 4.45E-11 T 09-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal BV404_RS01980 b1a629c70414d5e8342cd46603abe5f5 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 4.5E-6 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BV404_RS01980 b1a629c70414d5e8342cd46603abe5f5 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 4.5E-6 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BV404_RS01980 b1a629c70414d5e8342cd46603abe5f5 205 SUPERFAMILY SSF46689 9 84 8.98E-15 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS08395 a78e31287a6659fc1565b05553435c57 498 Pfam PF00171 Aldehyde dehydrogenase family 15 478 1.8E-135 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 BV404_RS08395 a78e31287a6659fc1565b05553435c57 498 Gene3D G3DSA:3.40.605.10 2 258 3.6E-87 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 BV404_RS08395 a78e31287a6659fc1565b05553435c57 498 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 272 283 - T 09-03-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 BV404_RS08395 a78e31287a6659fc1565b05553435c57 498 Gene3D G3DSA:3.40.309.10 259 443 5.5E-65 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 BV404_RS08395 a78e31287a6659fc1565b05553435c57 498 SUPERFAMILY SSF53720 2 484 1.7E-144 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 BV404_RS08395 a78e31287a6659fc1565b05553435c57 498 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 5 482 1.6E-205 T 09-03-2017 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373|Reactome: R-HSA-70895 BV404_RS07720 fe7e858f2b4754f25988ca1f43abd44f 107 Pfam PF08895 Domain of unknown function (DUF1840) 1 103 2.2E-32 T 09-03-2017 IPR014991 Protein of unknown function DUF1840 BV404_RS02100 e8a8f920bffc11bf64b80980becbafeb 638 Gene3D G3DSA:3.20.20.80 256 636 9.8E-137 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 BV404_RS02100 e8a8f920bffc11bf64b80980becbafeb 638 SUPERFAMILY SSF51445 258 618 1.05E-127 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily BV404_RS02100 e8a8f920bffc11bf64b80980becbafeb 638 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 258 605 4.4E-120 T 09-03-2017 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 BV404_RS02100 e8a8f920bffc11bf64b80980becbafeb 638 Gene3D G3DSA:3.30.379.10 134 255 1.4E-21 T 09-03-2017 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BV404_RS02100 e8a8f920bffc11bf64b80980becbafeb 638 PRINTS PR00738 Glycosyl hydrolase family 20 signature 351 368 1.7E-52 T 09-03-2017 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BV404_RS02100 e8a8f920bffc11bf64b80980becbafeb 638 PRINTS PR00738 Glycosyl hydrolase family 20 signature 587 604 1.7E-52 T 09-03-2017 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BV404_RS02100 e8a8f920bffc11bf64b80980becbafeb 638 PRINTS PR00738 Glycosyl hydrolase family 20 signature 252 269 1.7E-52 T 09-03-2017 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BV404_RS02100 e8a8f920bffc11bf64b80980becbafeb 638 PRINTS PR00738 Glycosyl hydrolase family 20 signature 400 418 1.7E-52 T 09-03-2017 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BV404_RS02100 e8a8f920bffc11bf64b80980becbafeb 638 PRINTS PR00738 Glycosyl hydrolase family 20 signature 281 302 1.7E-52 T 09-03-2017 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BV404_RS02100 e8a8f920bffc11bf64b80980becbafeb 638 PRINTS PR00738 Glycosyl hydrolase family 20 signature 422 435 1.7E-52 T 09-03-2017 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BV404_RS02100 e8a8f920bffc11bf64b80980becbafeb 638 PRINTS PR00738 Glycosyl hydrolase family 20 signature 217 237 1.7E-52 T 09-03-2017 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BV404_RS02100 e8a8f920bffc11bf64b80980becbafeb 638 PRINTS PR00738 Glycosyl hydrolase family 20 signature 569 585 1.7E-52 T 09-03-2017 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BV404_RS02100 e8a8f920bffc11bf64b80980becbafeb 638 SUPERFAMILY SSF55545 131 257 3.44E-25 T 09-03-2017 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BV404_RS02100 e8a8f920bffc11bf64b80980becbafeb 638 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 138 255 1.2E-17 T 09-03-2017 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 BV404_RS03830 4464ae757b6e527a54d0bb953fb0d9b6 296 SUPERFAMILY SSF53807 22 295 6.87E-75 T 09-03-2017 BV404_RS03830 4464ae757b6e527a54d0bb953fb0d9b6 296 Pfam PF01297 Zinc-uptake complex component A periplasmic 23 293 5.6E-58 T 09-03-2017 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 BV404_RS03830 4464ae757b6e527a54d0bb953fb0d9b6 296 Gene3D G3DSA:3.40.50.1980 12 184 3.3E-45 T 09-03-2017 BV404_RS03830 4464ae757b6e527a54d0bb953fb0d9b6 296 Gene3D G3DSA:3.40.50.1980 186 295 1.0E-27 T 09-03-2017 BV404_RS11740 b1ca509cb1454339a61c73f9dff0739a 211 Pfam PF00043 Glutathione S-transferase, C-terminal domain 110 194 4.4E-8 T 09-03-2017 IPR004046 Glutathione S-transferase, C-terminal BV404_RS11740 b1ca509cb1454339a61c73f9dff0739a 211 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 87 3.9E-17 T 09-03-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 BV404_RS11740 b1ca509cb1454339a61c73f9dff0739a 211 SUPERFAMILY SSF47616 82 208 6.25E-24 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like BV404_RS11740 b1ca509cb1454339a61c73f9dff0739a 211 Gene3D G3DSA:3.40.30.10 7 100 4.8E-29 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS11740 b1ca509cb1454339a61c73f9dff0739a 211 SUPERFAMILY SSF52833 11 110 3.73E-22 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS11740 b1ca509cb1454339a61c73f9dff0739a 211 Gene3D G3DSA:1.20.1050.10 101 208 1.5E-14 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like BV404_RS02775 4e8a8102f9dfa849bc3ad6cbdf696c5e 594 Gene3D G3DSA:1.10.10.10 6 80 7.5E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS02775 4e8a8102f9dfa849bc3ad6cbdf696c5e 594 SUPERFAMILY SSF46785 8 82 1.7E-13 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS02775 4e8a8102f9dfa849bc3ad6cbdf696c5e 594 Gene3D G3DSA:3.40.640.10 167 372 5.6E-43 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 BV404_RS02775 4e8a8102f9dfa849bc3ad6cbdf696c5e 594 Pfam PF00155 Aminotransferase class I and II 140 474 4.2E-9 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BV404_RS02775 4e8a8102f9dfa849bc3ad6cbdf696c5e 594 SMART SM00345 20 79 5.9E-4 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BV404_RS02775 4e8a8102f9dfa849bc3ad6cbdf696c5e 594 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 79 1.1E-5 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BV404_RS02775 4e8a8102f9dfa849bc3ad6cbdf696c5e 594 SUPERFAMILY SSF53383 128 482 3.48E-62 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase BV404_RS14210 d3a71146ec1295d624cbb120ff3e2691 270 PRINTS PR00123 ATP synthase A subunit signature 248 263 3.6E-14 T 09-03-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 BV404_RS14210 d3a71146ec1295d624cbb120ff3e2691 270 PRINTS PR00123 ATP synthase A subunit signature 101 117 3.6E-14 T 09-03-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 BV404_RS14210 d3a71146ec1295d624cbb120ff3e2691 270 PRINTS PR00123 ATP synthase A subunit signature 200 222 3.6E-14 T 09-03-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 BV404_RS14210 d3a71146ec1295d624cbb120ff3e2691 270 Hamap MF_01393 ATP synthase subunit a [atpB]. 14 268 15.558 T 09-03-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 BV404_RS14210 d3a71146ec1295d624cbb120ff3e2691 270 ProSitePatterns PS00449 ATP synthase a subunit signature. 203 212 - T 09-03-2017 IPR023011 ATPase, F0 complex, subunit A, active site Reactome: R-HSA-163210 BV404_RS14210 d3a71146ec1295d624cbb120ff3e2691 270 Gene3D G3DSA:1.20.120.220 94 267 3.6E-60 T 09-03-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 BV404_RS14210 d3a71146ec1295d624cbb120ff3e2691 270 SUPERFAMILY SSF81336 93 262 8.63E-50 T 09-03-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 BV404_RS14210 d3a71146ec1295d624cbb120ff3e2691 270 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 35 263 3.9E-44 T 09-03-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 BV404_RS14210 d3a71146ec1295d624cbb120ff3e2691 270 Pfam PF00119 ATP synthase A chain 44 262 1.7E-57 T 09-03-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 BV404_RS05145 2ffa184766f4659530431f64ffad9159 668 Pfam PF00593 TonB dependent receptor 427 665 1.4E-16 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 BV404_RS05145 2ffa184766f4659530431f64ffad9159 668 Pfam PF07715 TonB-dependent Receptor Plug Domain 41 156 2.2E-12 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 BV404_RS05145 2ffa184766f4659530431f64ffad9159 668 SUPERFAMILY SSF56935 13 668 3.36E-95 T 09-03-2017 BV404_RS05145 2ffa184766f4659530431f64ffad9159 668 Gene3D G3DSA:2.40.170.20 159 668 6.5E-66 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 BV404_RS05145 2ffa184766f4659530431f64ffad9159 668 Gene3D G3DSA:2.170.130.10 20 158 1.4E-28 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 BV404_RS05145 2ffa184766f4659530431f64ffad9159 668 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 651 668 - T 09-03-2017 IPR010917 TonB-dependent receptor, conserved site BV404_RS12320 41956e707e299c35bc83178a16868325 390 Gene3D G3DSA:1.10.10.10 329 381 6.5E-4 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS12320 41956e707e299c35bc83178a16868325 390 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 378 3.4E-132 T 09-03-2017 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 BV404_RS12320 41956e707e299c35bc83178a16868325 390 Gene3D G3DSA:3.80.30.20 7 242 1.2E-28 T 09-03-2017 IPR023404 Radical SAM, alpha/beta horseshoe BV404_RS12320 41956e707e299c35bc83178a16868325 390 SUPERFAMILY SSF102114 4 386 7.46E-111 T 09-03-2017 BV404_RS12320 41956e707e299c35bc83178a16868325 390 Pfam PF06969 HemN C-terminal domain 316 374 9.8E-11 T 09-03-2017 IPR010723 HemN, C-terminal BV404_RS12320 41956e707e299c35bc83178a16868325 390 Pfam PF04055 Radical SAM superfamily 11 179 4.3E-18 T 09-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 BV404_RS12320 41956e707e299c35bc83178a16868325 390 SMART SM00729 6 227 2.8E-51 T 09-03-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 BV404_RS08355 5b7fb8a8bf868f7fb836d34266c721fb 248 PRINTS PR00502 NUDIX hydrolase family signature 132 147 1.5E-6 T 09-03-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 BV404_RS08355 5b7fb8a8bf868f7fb836d34266c721fb 248 PRINTS PR00502 NUDIX hydrolase family signature 118 132 1.5E-6 T 09-03-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 BV404_RS08355 5b7fb8a8bf868f7fb836d34266c721fb 248 SUPERFAMILY SSF55811 61 220 3.79E-24 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 BV404_RS08355 5b7fb8a8bf868f7fb836d34266c721fb 248 ProSitePatterns PS00893 Nudix box signature. 123 144 - T 09-03-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 BV404_RS08355 5b7fb8a8bf868f7fb836d34266c721fb 248 Pfam PF00293 NUDIX domain 92 214 2.5E-17 T 09-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 BV404_RS08355 5b7fb8a8bf868f7fb836d34266c721fb 248 Gene3D G3DSA:3.90.79.10 89 217 1.5E-25 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 BV404_RS06785 b24abd89f0e5e77db1cb5fc397888283 368 Pfam PF01546 Peptidase family M20/M25/M40 73 367 1.4E-18 T 09-03-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 BV404_RS06785 b24abd89f0e5e77db1cb5fc397888283 368 SUPERFAMILY SSF55031 177 289 3.66E-22 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain BV404_RS06785 b24abd89f0e5e77db1cb5fc397888283 368 Gene3D G3DSA:3.40.630.10 3 177 6.9E-68 T 09-03-2017 BV404_RS06785 b24abd89f0e5e77db1cb5fc397888283 368 Gene3D G3DSA:3.40.630.10 287 364 6.9E-68 T 09-03-2017 BV404_RS06785 b24abd89f0e5e77db1cb5fc397888283 368 SUPERFAMILY SSF53187 7 175 4.45E-57 T 09-03-2017 BV404_RS06785 b24abd89f0e5e77db1cb5fc397888283 368 SUPERFAMILY SSF53187 287 367 4.45E-57 T 09-03-2017 BV404_RS06785 b24abd89f0e5e77db1cb5fc397888283 368 Gene3D G3DSA:3.30.70.360 178 281 4.0E-24 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain BV404_RS06785 b24abd89f0e5e77db1cb5fc397888283 368 TIGRFAM TIGR01883 PepT-like: peptidase T-like protein 8 365 5.0E-160 T 09-03-2017 IPR010162 Peptidase M20B, peptidase T-like BV404_RS06785 b24abd89f0e5e77db1cb5fc397888283 368 Pfam PF07687 Peptidase dimerisation domain 179 273 7.4E-15 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain BV404_RS10555 db884bb11437abf5cdd22d157cef7408 207 Gene3D G3DSA:3.40.50.1820 13 180 3.3E-31 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold BV404_RS10555 db884bb11437abf5cdd22d157cef7408 207 Pfam PF12697 Alpha/beta hydrolase family 15 116 1.5E-6 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 BV404_RS10555 db884bb11437abf5cdd22d157cef7408 207 SUPERFAMILY SSF53474 9 178 2.47E-27 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold BV404_RS00420 e05471253431812331ceca83e07cecb3 309 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BV404_RS00420 e05471253431812331ceca83e07cecb3 309 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 3.1E-32 T 09-03-2017 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 BV404_RS00420 e05471253431812331ceca83e07cecb3 309 SUPERFAMILY SSF53671 4 306 5.37E-102 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BV404_RS00420 e05471253431812331ceca83e07cecb3 309 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 3.7E-43 T 09-03-2017 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 BV404_RS00420 e05471253431812331ceca83e07cecb3 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 4.8E-37 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 BV404_RS00420 e05471253431812331ceca83e07cecb3 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 4.8E-37 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 BV404_RS00420 e05471253431812331ceca83e07cecb3 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 4.8E-37 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 BV404_RS00420 e05471253431812331ceca83e07cecb3 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 4.8E-37 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 BV404_RS00420 e05471253431812331ceca83e07cecb3 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 4.8E-37 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 BV404_RS00420 e05471253431812331ceca83e07cecb3 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 4.8E-37 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 BV404_RS00420 e05471253431812331ceca83e07cecb3 309 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 38.645 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 BV404_RS00420 e05471253431812331ceca83e07cecb3 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 2.7E-27 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BV404_RS00420 e05471253431812331ceca83e07cecb3 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 2.7E-27 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BV404_RS00420 e05471253431812331ceca83e07cecb3 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 2.7E-27 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BV404_RS00420 e05471253431812331ceca83e07cecb3 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 2.7E-27 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BV404_RS00420 e05471253431812331ceca83e07cecb3 309 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 6.7E-115 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 BV404_RS00420 e05471253431812331ceca83e07cecb3 309 Gene3D G3DSA:3.40.50.1370 7 144 9.4E-51 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BV404_RS00420 e05471253431812331ceca83e07cecb3 309 Gene3D G3DSA:3.40.50.1370 145 292 2.4E-55 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BV404_RS01125 5786bd6c83ab26831e552a4049c10225 574 Pfam PF02080 TrkA-C domain 209 278 1.1E-12 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BV404_RS01125 5786bd6c83ab26831e552a4049c10225 574 Pfam PF02080 TrkA-C domain 293 349 2.6E-11 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BV404_RS01125 5786bd6c83ab26831e552a4049c10225 574 Pfam PF03600 Citrate transporter 31 518 2.1E-25 T 09-03-2017 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 BV404_RS01125 5786bd6c83ab26831e552a4049c10225 574 SUPERFAMILY SSF116726 205 283 7.19E-17 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BV404_RS01125 5786bd6c83ab26831e552a4049c10225 574 Gene3D G3DSA:3.30.70.1450 290 363 4.4E-15 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BV404_RS01125 5786bd6c83ab26831e552a4049c10225 574 Gene3D G3DSA:3.30.70.1450 207 287 3.3E-18 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BV404_RS01125 5786bd6c83ab26831e552a4049c10225 574 SUPERFAMILY SSF116726 290 349 1.96E-13 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BV404_RS01830 07b72b926f2e3f68d3e6003792186e09 226 Pfam PF01865 Protein of unknown function DUF47 7 223 3.6E-66 T 09-03-2017 IPR018445 Putative phosphate transport regulator BV404_RS01830 07b72b926f2e3f68d3e6003792186e09 226 TIGRFAM TIGR00153 TIGR00153: TIGR00153 family protein 4 225 1.6E-68 T 09-03-2017 IPR002727 Protein of unknown function DUF47 BV404_RS01830 07b72b926f2e3f68d3e6003792186e09 226 SUPERFAMILY SSF109755 28 209 2.09E-15 T 09-03-2017 BV404_RS05770 ea5212c9eff8b5deb9d6ac24bb8fffe3 266 SUPERFAMILY SSF53474 14 261 3.98E-44 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold BV404_RS05770 ea5212c9eff8b5deb9d6ac24bb8fffe3 266 PRINTS PR00412 Epoxide hydrolase signature 237 259 4.0E-5 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 BV404_RS05770 ea5212c9eff8b5deb9d6ac24bb8fffe3 266 PRINTS PR00412 Epoxide hydrolase signature 205 221 4.0E-5 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 BV404_RS05770 ea5212c9eff8b5deb9d6ac24bb8fffe3 266 PRINTS PR00412 Epoxide hydrolase signature 24 42 4.0E-5 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 BV404_RS05770 ea5212c9eff8b5deb9d6ac24bb8fffe3 266 Pfam PF00561 alpha/beta hydrolase fold 19 121 5.1E-21 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 BV404_RS05770 ea5212c9eff8b5deb9d6ac24bb8fffe3 266 Gene3D G3DSA:3.40.50.1820 14 261 4.1E-44 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold BV404_RS12465 f23569dda2577523b3960007809c9691 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 6.8E-41 T 09-03-2017 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS12465 f23569dda2577523b3960007809c9691 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.581 T 09-03-2017 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS12465 f23569dda2577523b3960007809c9691 103 SUPERFAMILY SSF141091 1 102 3.92E-39 T 09-03-2017 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS12465 f23569dda2577523b3960007809c9691 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 09-03-2017 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS12465 f23569dda2577523b3960007809c9691 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 9.9E-45 T 09-03-2017 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS02235 a2eee70c4ca1dfd87c910deaa706bcd6 112 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 2.3E-26 T 09-03-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 BV404_RS02235 a2eee70c4ca1dfd87c910deaa706bcd6 112 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 1.2E-45 T 09-03-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 BV404_RS02235 a2eee70c4ca1dfd87c910deaa706bcd6 112 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 1.2E-45 T 09-03-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 BV404_RS02235 a2eee70c4ca1dfd87c910deaa706bcd6 112 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 1.2E-45 T 09-03-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 BV404_RS02235 a2eee70c4ca1dfd87c910deaa706bcd6 112 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 1.2E-45 T 09-03-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 BV404_RS02235 a2eee70c4ca1dfd87c910deaa706bcd6 112 Pfam PF03840 Preprotein translocase SecG subunit 4 72 1.9E-22 T 09-03-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 BV404_RS11570 0fffa21f53c39ea8618b54400d012fab 271 Gene3D G3DSA:3.40.50.1980 142 267 1.2E-38 T 09-03-2017 BV404_RS11570 0fffa21f53c39ea8618b54400d012fab 271 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 1 270 50.709 T 09-03-2017 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 BV404_RS11570 0fffa21f53c39ea8618b54400d012fab 271 SUPERFAMILY SSF53807 20 266 2.63E-62 T 09-03-2017 BV404_RS11570 0fffa21f53c39ea8618b54400d012fab 271 Gene3D G3DSA:3.40.50.1980 20 138 1.5E-31 T 09-03-2017 BV404_RS11570 0fffa21f53c39ea8618b54400d012fab 271 Pfam PF01497 Periplasmic binding protein 24 245 1.3E-30 T 09-03-2017 IPR002491 ABC transporter periplasmic binding domain GO:0005488 BV404_RS11085 85f29dcad2530c7dd1c6bd7951223de5 229 SUPERFAMILY SSF52172 3 184 3.02E-43 T 09-03-2017 IPR011006 CheY-like superfamily BV404_RS11085 85f29dcad2530c7dd1c6bd7951223de5 229 Pfam PF00072 Response regulator receiver domain 5 116 1.1E-28 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS11085 85f29dcad2530c7dd1c6bd7951223de5 229 SMART SM00448 3 116 1.9E-45 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS11085 85f29dcad2530c7dd1c6bd7951223de5 229 SMART SM00862 150 225 1.1E-27 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BV404_RS11085 85f29dcad2530c7dd1c6bd7951223de5 229 Gene3D G3DSA:3.40.50.2300 2 124 1.3E-41 T 09-03-2017 BV404_RS11085 85f29dcad2530c7dd1c6bd7951223de5 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 225 4.0E-28 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BV404_RS11085 85f29dcad2530c7dd1c6bd7951223de5 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 5.1E-113 T 09-03-2017 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 BV404_RS11085 85f29dcad2530c7dd1c6bd7951223de5 229 Gene3D G3DSA:1.10.10.10 129 227 2.0E-36 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS09810 337fe236767ecb8b30401bff44251fa9 212 PIRSF PIRSF006091 1 206 6.1E-79 T 09-03-2017 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 BV404_RS09810 337fe236767ecb8b30401bff44251fa9 212 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 193 4.3E-65 T 09-03-2017 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 BV404_RS09810 337fe236767ecb8b30401bff44251fa9 212 Hamap MF_00479 Electron transport complex subunit RsxG [rsxG]. 2 194 26.181 T 09-03-2017 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 BV404_RS09810 337fe236767ecb8b30401bff44251fa9 212 SMART SM00900 100 192 8.8E-35 T 09-03-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 BV404_RS09810 337fe236767ecb8b30401bff44251fa9 212 Pfam PF04205 FMN-binding domain 100 188 1.0E-20 T 09-03-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 BV404_RS12025 fcacfdba9124f188aedfb4b18edfc610 147 Gene3D G3DSA:1.10.10.410 91 147 3.4E-23 T 09-03-2017 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal BV404_RS12025 fcacfdba9124f188aedfb4b18edfc610 147 Gene3D G3DSA:1.10.1510.10 1 90 1.4E-32 T 09-03-2017 BV404_RS12025 fcacfdba9124f188aedfb4b18edfc610 147 Pfam PF09424 Yqey-like protein 5 146 5.7E-56 T 09-03-2017 IPR019004 Uncharacterised domain YOR215C, mitochondrial BV404_RS12025 fcacfdba9124f188aedfb4b18edfc610 147 SUPERFAMILY SSF89095 1 146 7.32E-43 T 09-03-2017 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 BV404_RS08790 bf1bc9f5eba8d88134d88438cbea8910 227 TIGRFAM TIGR02796 tolQ: protein TolQ 6 220 2.9E-93 T 09-03-2017 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 BV404_RS08790 bf1bc9f5eba8d88134d88438cbea8910 227 Pfam PF01618 MotA/TolQ/ExbB proton channel family 80 205 2.0E-42 T 09-03-2017 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 BV404_RS03420 a777cfa249939a7d3b9b063f630df68e 116 Pfam PF03960 ArsC family 6 115 1.8E-21 T 09-03-2017 IPR006660 Arsenate reductase-like BV404_RS03420 a777cfa249939a7d3b9b063f630df68e 116 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 3 116 7.6E-48 T 09-03-2017 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 BV404_RS03420 a777cfa249939a7d3b9b063f630df68e 116 SUPERFAMILY SSF52833 2 116 7.91E-36 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS03420 a777cfa249939a7d3b9b063f630df68e 116 Gene3D G3DSA:3.40.30.10 1 116 2.8E-49 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS08250 1b426276202f1d9e63140eb071532be9 423 Gene3D G3DSA:3.40.640.10 59 317 1.9E-84 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 BV404_RS08250 1b426276202f1d9e63140eb071532be9 423 SUPERFAMILY SSF53383 19 420 6.33E-132 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase BV404_RS08250 1b426276202f1d9e63140eb071532be9 423 Pfam PF00202 Aminotransferase class-III 17 419 2.1E-128 T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BV404_RS08250 1b426276202f1d9e63140eb071532be9 423 Gene3D G3DSA:3.90.1150.10 319 420 5.1E-38 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 BV404_RS08250 1b426276202f1d9e63140eb071532be9 423 Gene3D G3DSA:3.90.1150.10 3 58 5.1E-38 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 BV404_RS08250 1b426276202f1d9e63140eb071532be9 423 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 9 420 2.7E-177 T 09-03-2017 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 BV404_RS08250 1b426276202f1d9e63140eb071532be9 423 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 272 - T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BV404_RS14555 c877594b0e736076ee954062934fa404 544 Pfam PF03109 ABC1 family 112 230 4.4E-36 T 09-03-2017 IPR004147 UbiB domain BV404_RS14555 c877594b0e736076ee954062934fa404 544 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 445 3.5E-179 T 09-03-2017 IPR010232 Probable protein kinase UbiB GO:0006744 BV404_RS14555 c877594b0e736076ee954062934fa404 544 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 539 57.112 T 09-03-2017 IPR010232 Probable protein kinase UbiB GO:0006744 BV404_RS14555 c877594b0e736076ee954062934fa404 544 SUPERFAMILY SSF56112 94 158 9.84E-47 T 09-03-2017 IPR011009 Protein kinase-like domain BV404_RS14555 c877594b0e736076ee954062934fa404 544 SUPERFAMILY SSF56112 193 436 9.84E-47 T 09-03-2017 IPR011009 Protein kinase-like domain BV404_RS09165 2774954f78c58d06c76bc74cfeae5fe7 226 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 34.832 T 09-03-2017 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 BV404_RS09165 2774954f78c58d06c76bc74cfeae5fe7 226 SUPERFAMILY SSF52540 6 223 8.08E-47 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09165 2774954f78c58d06c76bc74cfeae5fe7 226 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 2.4E-86 T 09-03-2017 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 BV404_RS09165 2774954f78c58d06c76bc74cfeae5fe7 226 Pfam PF02224 Cytidylate kinase 8 221 1.3E-78 T 09-03-2017 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 BV404_RS09165 2774954f78c58d06c76bc74cfeae5fe7 226 Gene3D G3DSA:3.40.50.300 6 221 2.3E-77 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS04065 d5c6403cc5fac231459d19e4b55aef6c 406 Gene3D G3DSA:1.10.10.10 5 84 3.0E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS04065 d5c6403cc5fac231459d19e4b55aef6c 406 SUPERFAMILY SSF46785 4 83 5.63E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS04065 d5c6403cc5fac231459d19e4b55aef6c 406 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 4.5E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS04065 d5c6403cc5fac231459d19e4b55aef6c 406 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 4.5E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS04065 d5c6403cc5fac231459d19e4b55aef6c 406 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 4.5E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS04065 d5c6403cc5fac231459d19e4b55aef6c 406 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 107 165 2.8E-11 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS04065 d5c6403cc5fac231459d19e4b55aef6c 406 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 4.5E-19 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS04065 d5c6403cc5fac231459d19e4b55aef6c 406 SUPERFAMILY SSF46785 104 214 8.17E-14 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS04065 d5c6403cc5fac231459d19e4b55aef6c 406 Gene3D G3DSA:3.40.190.10 192 277 6.4E-11 T 09-03-2017 BV404_RS04065 d5c6403cc5fac231459d19e4b55aef6c 406 Gene3D G3DSA:3.40.190.10 278 367 4.9E-10 T 09-03-2017 BV404_RS04065 d5c6403cc5fac231459d19e4b55aef6c 406 Pfam PF03466 LysR substrate binding domain 193 398 7.7E-26 T 09-03-2017 IPR005119 LysR, substrate-binding BV404_RS04065 d5c6403cc5fac231459d19e4b55aef6c 406 Gene3D G3DSA:1.10.10.10 105 188 9.5E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS04065 d5c6403cc5fac231459d19e4b55aef6c 406 SUPERFAMILY SSF53850 193 399 5.91E-31 T 09-03-2017 BV404_RS14075 5107097ca5080e312e90aeb583cb8e74 318 SUPERFAMILY SSF53850 92 298 5.25E-39 T 09-03-2017 BV404_RS14075 5107097ca5080e312e90aeb583cb8e74 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 5.1E-16 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS14075 5107097ca5080e312e90aeb583cb8e74 318 Gene3D G3DSA:1.10.10.10 5 89 6.3E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS14075 5107097ca5080e312e90aeb583cb8e74 318 Gene3D G3DSA:3.40.190.10 92 174 4.3E-26 T 09-03-2017 BV404_RS14075 5107097ca5080e312e90aeb583cb8e74 318 Gene3D G3DSA:3.40.190.10 274 302 4.3E-26 T 09-03-2017 BV404_RS14075 5107097ca5080e312e90aeb583cb8e74 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 8.0E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS14075 5107097ca5080e312e90aeb583cb8e74 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 8.0E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS14075 5107097ca5080e312e90aeb583cb8e74 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 8.0E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS14075 5107097ca5080e312e90aeb583cb8e74 318 Gene3D G3DSA:3.40.190.10 175 269 1.4E-21 T 09-03-2017 BV404_RS14075 5107097ca5080e312e90aeb583cb8e74 318 SUPERFAMILY SSF46785 7 88 2.36E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS14075 5107097ca5080e312e90aeb583cb8e74 318 Pfam PF03466 LysR substrate binding domain 99 299 7.1E-23 T 09-03-2017 IPR005119 LysR, substrate-binding BV404_RS02695 9b9cee2fb75f8843772302e730700a50 414 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 412 36.413 T 09-03-2017 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 BV404_RS02695 9b9cee2fb75f8843772302e730700a50 414 PIRSF PIRSF016055 1 414 3.4E-200 T 09-03-2017 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 BV404_RS02695 9b9cee2fb75f8843772302e730700a50 414 Pfam PF03116 NQR2, RnfD, RnfE family 41 406 1.0E-107 T 09-03-2017 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 BV404_RS02695 9b9cee2fb75f8843772302e730700a50 414 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 408 7.9E-202 T 09-03-2017 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 BV404_RS08940 e70c4e6ef49d018a2700fe3c5b2a3d53 220 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 8 204 3.3E-7 T 09-03-2017 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family GO:0000041|GO:0016021 BV404_RS11145 7e54596415657ed86b8637cc0246be6e 307 Gene3D G3DSA:3.60.10.10 87 238 3.3E-8 T 09-03-2017 IPR005135 Endonuclease/exonuclease/phosphatase BV404_RS11145 7e54596415657ed86b8637cc0246be6e 307 SUPERFAMILY SSF56219 85 304 1.44E-22 T 09-03-2017 IPR005135 Endonuclease/exonuclease/phosphatase BV404_RS11145 7e54596415657ed86b8637cc0246be6e 307 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 93 298 6.3E-15 T 09-03-2017 IPR005135 Endonuclease/exonuclease/phosphatase BV404_RS13225 e4bc81e0bea96e0c05ae000ca9cacd39 89 Gene3D G3DSA:3.10.20.30 2 86 2.1E-25 T 09-03-2017 IPR012675 Beta-grasp domain BV404_RS13225 e4bc81e0bea96e0c05ae000ca9cacd39 89 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 79 4.9E-15 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 BV404_RS13225 e4bc81e0bea96e0c05ae000ca9cacd39 89 SUPERFAMILY SSF54292 1 87 3.28E-27 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 BV404_RS13225 e4bc81e0bea96e0c05ae000ca9cacd39 89 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 09-03-2017 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 BV404_RS05500 89c6be902aabd4d0ea6a917187b36b3f 455 Pfam PF03553 Na+/H+ antiporter family 26 223 4.3E-13 T 09-03-2017 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 BV404_RS00790 46b2a3c15cc25bcd1ea4221a0593663f 502 Gene3D G3DSA:3.40.50.300 26 153 2.2E-6 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS00790 46b2a3c15cc25bcd1ea4221a0593663f 502 Pfam PF05036 Sporulation related domain 415 488 3.3E-8 T 09-03-2017 IPR007730 Sporulation-related domain GO:0042834 BV404_RS00790 46b2a3c15cc25bcd1ea4221a0593663f 502 Pfam PF13401 AAA domain 27 150 2.9E-9 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS00790 46b2a3c15cc25bcd1ea4221a0593663f 502 SUPERFAMILY SSF52540 26 192 1.52E-11 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS01290 5ddc6218175e945bcb5c14b96a0b6849 324 Gene3D G3DSA:3.10.580.10 193 321 1.1E-38 T 09-03-2017 BV404_RS01290 5ddc6218175e945bcb5c14b96a0b6849 324 PIRSF PIRSF004692 1 324 1.1E-129 T 09-03-2017 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 BV404_RS01290 5ddc6218175e945bcb5c14b96a0b6849 324 SMART SM00116 211 259 0.049 T 09-03-2017 IPR000644 CBS domain BV404_RS01290 5ddc6218175e945bcb5c14b96a0b6849 324 SMART SM00116 276 323 0.038 T 09-03-2017 IPR000644 CBS domain BV404_RS01290 5ddc6218175e945bcb5c14b96a0b6849 324 Pfam PF01380 SIS domain 44 173 5.1E-32 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 BV404_RS01290 5ddc6218175e945bcb5c14b96a0b6849 324 Gene3D G3DSA:3.40.50.10490 11 192 1.0E-51 T 09-03-2017 BV404_RS01290 5ddc6218175e945bcb5c14b96a0b6849 324 Pfam PF00571 CBS domain 269 321 1.8E-7 T 09-03-2017 IPR000644 CBS domain BV404_RS01290 5ddc6218175e945bcb5c14b96a0b6849 324 Pfam PF00571 CBS domain 204 259 1.0E-4 T 09-03-2017 IPR000644 CBS domain BV404_RS01290 5ddc6218175e945bcb5c14b96a0b6849 324 SUPERFAMILY SSF53697 8 319 3.56E-68 T 09-03-2017 BV404_RS01290 5ddc6218175e945bcb5c14b96a0b6849 324 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 46 314 9.8E-114 T 09-03-2017 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 BV404_RS11635 402daae382604804615f5e75875859c1 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 298 1.1E-140 T 09-03-2017 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 BV404_RS11635 402daae382604804615f5e75875859c1 305 SUPERFAMILY SSF54211 134 278 4.55E-52 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold BV404_RS11635 402daae382604804615f5e75875859c1 305 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 46.078 T 09-03-2017 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 BV404_RS11635 402daae382604804615f5e75875859c1 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 2.1E-107 T 09-03-2017 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 BV404_RS11635 402daae382604804615f5e75875859c1 305 SUPERFAMILY SSF54211 3 125 3.11E-42 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold BV404_RS11635 402daae382604804615f5e75875859c1 305 Gene3D G3DSA:3.30.230.20 3 126 1.9E-46 T 09-03-2017 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 BV404_RS11635 402daae382604804615f5e75875859c1 305 Gene3D G3DSA:3.30.1700.10 129 283 9.5E-61 T 09-03-2017 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 BV404_RS02850 1ae8027ef0b0efb0065443b782a6e1be 369 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 7 199 1.4E-76 T 09-03-2017 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BV404_RS02850 1ae8027ef0b0efb0065443b782a6e1be 369 SUPERFAMILY SSF55821 3 202 3.2E-87 T 09-03-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain BV404_RS02850 1ae8027ef0b0efb0065443b782a6e1be 369 SUPERFAMILY SSF142695 205 367 5.1E-48 T 09-03-2017 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 BV404_RS02850 1ae8027ef0b0efb0065443b782a6e1be 369 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 38.612 T 09-03-2017 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BV404_RS02850 1ae8027ef0b0efb0065443b782a6e1be 369 Pfam PF00925 GTP cyclohydrolase II 207 367 2.0E-41 T 09-03-2017 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 BV404_RS02850 1ae8027ef0b0efb0065443b782a6e1be 369 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 4.1E-85 T 09-03-2017 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BV404_RS02850 1ae8027ef0b0efb0065443b782a6e1be 369 PIRSF PIRSF001259 3 369 3.5E-132 T 09-03-2017 BV404_RS02850 1ae8027ef0b0efb0065443b782a6e1be 369 Gene3D G3DSA:3.90.870.10 2 211 2.6E-101 T 09-03-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain BV404_RS05925 14510fb131a493c1ec3fcea536d11c8b 579 Gene3D G3DSA:3.20.20.70 193 488 9.4E-48 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS05925 14510fb131a493c1ec3fcea536d11c8b 579 SUPERFAMILY SSF51445 195 533 7.35E-76 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily BV404_RS05925 14510fb131a493c1ec3fcea536d11c8b 579 Pfam PF02065 Melibiase 169 352 4.0E-17 T 09-03-2017 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 BV404_RS07780 517a58583e733198722b5bb2b70466bb 144 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 3 135 4.5E-8 T 09-03-2017 IPR019587 Polyketide cyclase/dehydrase BV404_RS07780 517a58583e733198722b5bb2b70466bb 144 Gene3D G3DSA:3.30.530.20 1 135 2.8E-9 T 09-03-2017 IPR023393 START-like domain BV404_RS07780 517a58583e733198722b5bb2b70466bb 144 SUPERFAMILY SSF55961 1 136 1.96E-34 T 09-03-2017 BV404_RS06740 90a7179d016eb47e8f83a0957df0593e 381 PRINTS PR00143 Citrate synthase signature 130 143 5.4E-37 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 BV404_RS06740 90a7179d016eb47e8f83a0957df0593e 381 PRINTS PR00143 Citrate synthase signature 256 276 5.4E-37 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 BV404_RS06740 90a7179d016eb47e8f83a0957df0593e 381 PRINTS PR00143 Citrate synthase signature 181 196 5.4E-37 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 BV404_RS06740 90a7179d016eb47e8f83a0957df0593e 381 PRINTS PR00143 Citrate synthase signature 313 329 5.4E-37 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 BV404_RS06740 90a7179d016eb47e8f83a0957df0593e 381 PRINTS PR00143 Citrate synthase signature 333 347 5.4E-37 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 BV404_RS06740 90a7179d016eb47e8f83a0957df0593e 381 PRINTS PR00143 Citrate synthase signature 203 231 5.4E-37 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 BV404_RS06740 90a7179d016eb47e8f83a0957df0593e 381 Pfam PF00285 Citrate synthase, C-terminal domain 15 362 7.2E-114 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 BV404_RS06740 90a7179d016eb47e8f83a0957df0593e 381 PIRSF PIRSF001369 8 381 2.3E-116 T 09-03-2017 IPR024176 Citrate synthase, bacterial-type BV404_RS06740 90a7179d016eb47e8f83a0957df0593e 381 Gene3D G3DSA:1.10.580.10 21 242 1.0E-73 T 09-03-2017 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 BV404_RS06740 90a7179d016eb47e8f83a0957df0593e 381 Gene3D G3DSA:1.10.230.10 243 327 8.8E-31 T 09-03-2017 IPR016143 Citrate synthase-like, small alpha subdomain Reactome: R-HSA-163765|Reactome: R-HSA-75105 BV404_RS06740 90a7179d016eb47e8f83a0957df0593e 381 ProSitePatterns PS00480 Citrate synthase signature. 263 275 - T 09-03-2017 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 BV404_RS06740 90a7179d016eb47e8f83a0957df0593e 381 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 15 380 4.1E-162 T 09-03-2017 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 BV404_RS06740 90a7179d016eb47e8f83a0957df0593e 381 SUPERFAMILY SSF48256 14 380 6.15E-125 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 BV404_RS03855 ac992a298e33ec74a1df9662f1aef700 141 Gene3D G3DSA:1.10.10.60 21 110 5.8E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS03855 ac992a298e33ec74a1df9662f1aef700 141 SUPERFAMILY SSF46689 15 113 3.4E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS02860 cbc25ebd03a753dfd6ffa0ef69e47615 156 Pfam PF01029 NusB family 11 149 3.7E-35 T 09-03-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 BV404_RS02860 cbc25ebd03a753dfd6ffa0ef69e47615 156 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 8 153 22.823 T 09-03-2017 IPR011605 NusB antitermination factor GO:0006353 BV404_RS02860 cbc25ebd03a753dfd6ffa0ef69e47615 156 SUPERFAMILY SSF48013 7 153 6.67E-39 T 09-03-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 BV404_RS02860 cbc25ebd03a753dfd6ffa0ef69e47615 156 Gene3D G3DSA:1.10.940.10 9 155 3.7E-42 T 09-03-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 BV404_RS02860 cbc25ebd03a753dfd6ffa0ef69e47615 156 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 10 150 9.5E-42 T 09-03-2017 IPR011605 NusB antitermination factor GO:0006353 BV404_RS02600 24a5795d05d7c4ee70376cd6b49119c5 260 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 246 4.0E-25 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS02600 24a5795d05d7c4ee70376cd6b49119c5 260 Gene3D G3DSA:1.10.3720.10 55 246 1.1E-22 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS02600 24a5795d05d7c4ee70376cd6b49119c5 260 SUPERFAMILY SSF161098 56 240 1.15E-30 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS13720 870d90e5956ee8736d960749961b209e 584 Pfam PF01019 Gamma-glutamyltranspeptidase 64 579 1.4E-161 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 BV404_RS13720 870d90e5956ee8736d960749961b209e 584 SUPERFAMILY SSF56235 41 583 9.26E-170 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal BV404_RS13720 870d90e5956ee8736d960749961b209e 584 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 50 576 4.9E-134 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 BV404_RS13720 870d90e5956ee8736d960749961b209e 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 463 478 1.2E-62 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 BV404_RS13720 870d90e5956ee8736d960749961b209e 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 296 315 1.2E-62 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 BV404_RS13720 870d90e5956ee8736d960749961b209e 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 146 164 1.2E-62 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 BV404_RS13720 870d90e5956ee8736d960749961b209e 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 71 96 1.2E-62 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 BV404_RS13720 870d90e5956ee8736d960749961b209e 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 487 504 1.2E-62 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 BV404_RS13720 870d90e5956ee8736d960749961b209e 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 266 282 1.2E-62 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 BV404_RS13720 870d90e5956ee8736d960749961b209e 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 164 183 1.2E-62 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 BV404_RS13720 870d90e5956ee8736d960749961b209e 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 405 423 1.2E-62 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 BV404_RS13720 870d90e5956ee8736d960749961b209e 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 427 445 1.2E-62 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 BV404_RS06520 b8aafab4665ea66e891467f29098319e 399 SUPERFAMILY SSF53383 2 398 9.74E-113 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase BV404_RS06520 b8aafab4665ea66e891467f29098319e 399 PRINTS PR00799 Aspartate aminotransferase signature 209 221 7.3E-39 T 09-03-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 BV404_RS06520 b8aafab4665ea66e891467f29098319e 399 PRINTS PR00799 Aspartate aminotransferase signature 276 301 7.3E-39 T 09-03-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 BV404_RS06520 b8aafab4665ea66e891467f29098319e 399 PRINTS PR00799 Aspartate aminotransferase signature 178 197 7.3E-39 T 09-03-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 BV404_RS06520 b8aafab4665ea66e891467f29098319e 399 PRINTS PR00799 Aspartate aminotransferase signature 344 362 7.3E-39 T 09-03-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 BV404_RS06520 b8aafab4665ea66e891467f29098319e 399 Pfam PF00155 Aminotransferase class I and II 30 395 4.8E-81 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BV404_RS06520 b8aafab4665ea66e891467f29098319e 399 Gene3D G3DSA:3.40.640.10 48 318 1.1E-103 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 BV404_RS06520 b8aafab4665ea66e891467f29098319e 399 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 246 259 - T 09-03-2017 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 BV404_RS14855 44146c6d9221e1f49ee28b2f7d837866 270 SUPERFAMILY SSF53335 19 251 1.66E-33 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS14855 44146c6d9221e1f49ee28b2f7d837866 270 Pfam PF04072 Leucine carboxyl methyltransferase 70 128 2.1E-5 T 09-03-2017 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 BV404_RS14855 44146c6d9221e1f49ee28b2f7d837866 270 Gene3D G3DSA:3.40.50.150 19 207 3.5E-29 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS14855 44146c6d9221e1f49ee28b2f7d837866 270 PIRSF PIRSF028177 4 270 3.5E-76 T 09-03-2017 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP GO:0017000|GO:1901106 BV404_RS13345 fd5d3bc8100a8616b192cb5f472e4640 90 SUPERFAMILY SSF47729 1 90 5.3E-33 T 09-03-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 BV404_RS13345 fd5d3bc8100a8616b192cb5f472e4640 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 6.5E-20 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 BV404_RS13345 fd5d3bc8100a8616b192cb5f472e4640 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 6.5E-20 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 BV404_RS13345 fd5d3bc8100a8616b192cb5f472e4640 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 6.5E-20 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 BV404_RS13345 fd5d3bc8100a8616b192cb5f472e4640 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.1E-33 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 BV404_RS13345 fd5d3bc8100a8616b192cb5f472e4640 90 SMART SM00411 1 90 6.0E-45 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 BV404_RS13345 fd5d3bc8100a8616b192cb5f472e4640 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 09-03-2017 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 BV404_RS13345 fd5d3bc8100a8616b192cb5f472e4640 90 Gene3D G3DSA:4.10.520.10 1 90 1.3E-37 T 09-03-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 BV404_RS03505 6c527253dc56565dd4ce24fa13c979a0 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.5E-7 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BV404_RS03505 6c527253dc56565dd4ce24fa13c979a0 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.5E-7 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BV404_RS03505 6c527253dc56565dd4ce24fa13c979a0 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.9E-19 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BV404_RS03505 6c527253dc56565dd4ce24fa13c979a0 335 Gene3D G3DSA:1.10.260.40 2 57 1.6E-24 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 BV404_RS03505 6c527253dc56565dd4ce24fa13c979a0 335 Pfam PF13377 Periplasmic binding protein-like domain 168 330 4.2E-32 T 09-03-2017 BV404_RS03505 6c527253dc56565dd4ce24fa13c979a0 335 Gene3D G3DSA:3.40.50.2300 58 166 7.1E-49 T 09-03-2017 BV404_RS03505 6c527253dc56565dd4ce24fa13c979a0 335 Gene3D G3DSA:3.40.50.2300 167 331 1.2E-49 T 09-03-2017 BV404_RS03505 6c527253dc56565dd4ce24fa13c979a0 335 SMART SM00354 1 71 8.8E-34 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BV404_RS03505 6c527253dc56565dd4ce24fa13c979a0 335 SUPERFAMILY SSF53822 61 331 3.0E-78 T 09-03-2017 IPR028082 Periplasmic binding protein-like I BV404_RS03505 6c527253dc56565dd4ce24fa13c979a0 335 SUPERFAMILY SSF47413 1 60 2.34E-17 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 BV404_RS03505 6c527253dc56565dd4ce24fa13c979a0 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 09-03-2017 BV404_RS03840 99b619ec10d7a9a44d7c12828fed4086 75 Pfam PF04023 FeoA domain 1 73 9.4E-18 T 09-03-2017 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 BV404_RS03840 99b619ec10d7a9a44d7c12828fed4086 75 SMART SM00899 1 74 1.1E-21 T 09-03-2017 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 BV404_RS03840 99b619ec10d7a9a44d7c12828fed4086 75 SUPERFAMILY SSF50037 4 74 5.49E-18 T 09-03-2017 IPR008988 Transcriptional repressor, C-terminal BV404_RS01145 f50f1971030fb2c7c595a087e3038c30 419 Pfam PF02687 FtsX-like permease family 293 410 7.8E-16 T 09-03-2017 IPR003838 ABC transporter permease protein domain GO:0016020 BV404_RS01145 f50f1971030fb2c7c595a087e3038c30 419 Pfam PF12704 MacB-like periplasmic core domain 20 213 8.3E-12 T 09-03-2017 IPR025857 MacB-like periplasmic core domain BV404_RS10920 77a34ba2a3adc511d233a99cd2cb6a6c 143 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 09-03-2017 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BV404_RS10920 77a34ba2a3adc511d233a99cd2cb6a6c 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 2.9E-37 T 09-03-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BV404_RS10920 77a34ba2a3adc511d233a99cd2cb6a6c 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 2.9E-37 T 09-03-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BV404_RS10920 77a34ba2a3adc511d233a99cd2cb6a6c 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 2.9E-37 T 09-03-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BV404_RS10920 77a34ba2a3adc511d233a99cd2cb6a6c 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 2.9E-37 T 09-03-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BV404_RS10920 77a34ba2a3adc511d233a99cd2cb6a6c 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 2.9E-37 T 09-03-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BV404_RS10920 77a34ba2a3adc511d233a99cd2cb6a6c 143 Pfam PF00334 Nucleoside diphosphate kinase 4 137 1.2E-57 T 09-03-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BV404_RS10920 77a34ba2a3adc511d233a99cd2cb6a6c 143 SUPERFAMILY SSF54919 1 140 6.94E-61 T 09-03-2017 BV404_RS10920 77a34ba2a3adc511d233a99cd2cb6a6c 143 SMART SM00562 3 140 1.9E-90 T 09-03-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BV404_RS10920 77a34ba2a3adc511d233a99cd2cb6a6c 143 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 35.399 T 09-03-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BV404_RS10920 77a34ba2a3adc511d233a99cd2cb6a6c 143 Gene3D G3DSA:3.30.70.141 1 140 8.6E-61 T 09-03-2017 BV404_RS07860 dfd72110bcf529b51fef374118909e9f 382 Gene3D G3DSA:3.40.1710.10 42 111 6.0E-5 T 09-03-2017 BV404_RS07860 dfd72110bcf529b51fef374118909e9f 382 Pfam PF12698 ABC-2 family transporter protein 22 368 2.3E-45 T 09-03-2017 BV404_RS09340 54b92f69d69f233d2e57ea866e7db73b 521 SMART SM00387 424 517 9.8E-8 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS09340 54b92f69d69f233d2e57ea866e7db73b 521 PRINTS PR00344 Bacterial sensor protein C-terminal signature 475 493 4.2E-5 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS09340 54b92f69d69f233d2e57ea866e7db73b 521 PRINTS PR00344 Bacterial sensor protein C-terminal signature 459 473 4.2E-5 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS09340 54b92f69d69f233d2e57ea866e7db73b 521 PRINTS PR00344 Bacterial sensor protein C-terminal signature 501 514 4.2E-5 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS09340 54b92f69d69f233d2e57ea866e7db73b 521 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 426 515 1.2E-6 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS09340 54b92f69d69f233d2e57ea866e7db73b 521 SUPERFAMILY SSF55874 427 517 5.5E-17 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS09340 54b92f69d69f233d2e57ea866e7db73b 521 Pfam PF05231 MASE1 9 286 3.1E-39 T 09-03-2017 IPR007895 MASE1 BV404_RS09340 54b92f69d69f233d2e57ea866e7db73b 521 Pfam PF07730 Histidine kinase 321 384 4.1E-12 T 09-03-2017 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 BV404_RS09340 54b92f69d69f233d2e57ea866e7db73b 521 Gene3D G3DSA:3.30.565.10 394 517 8.4E-8 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS15580 721c1d0d135ad25400688c7119f67cba 66 Pfam PF00206 Lyase 1 64 5.1E-7 T 09-03-2017 IPR022761 Fumarate lyase, N-terminal BV404_RS15580 721c1d0d135ad25400688c7119f67cba 66 SUPERFAMILY SSF48557 5 60 1.45E-6 T 09-03-2017 IPR008948 L-Aspartase-like GO:0003824 BV404_RS15580 721c1d0d135ad25400688c7119f67cba 66 Gene3D G3DSA:1.10.275.10 2 62 2.3E-15 T 09-03-2017 IPR024083 Fumarase/histidase, N-terminal BV404_RS06580 6ece2893a15430de97d1ae1909c71e3e 180 SUPERFAMILY SSF111126 1 176 3.5E-46 T 09-03-2017 IPR024096 NO signalling/Golgi transport ligand-binding domain BV404_RS06580 6ece2893a15430de97d1ae1909c71e3e 180 Gene3D G3DSA:3.90.1520.10 1 176 6.6E-54 T 09-03-2017 BV404_RS06580 6ece2893a15430de97d1ae1909c71e3e 180 Pfam PF07700 Haem-NO-binding 2 161 7.1E-39 T 09-03-2017 IPR011644 Heme-NO binding GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 BV404_RS02780 2b21f8ed9e20b311efb19ad369aa2419 423 Gene3D G3DSA:3.40.640.10 58 302 3.7E-86 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 BV404_RS02780 2b21f8ed9e20b311efb19ad369aa2419 423 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 9 420 1.3E-180 T 09-03-2017 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 BV404_RS02780 2b21f8ed9e20b311efb19ad369aa2419 423 Gene3D G3DSA:3.90.1150.10 303 420 2.2E-37 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 BV404_RS02780 2b21f8ed9e20b311efb19ad369aa2419 423 Pfam PF00202 Aminotransferase class-III 20 417 4.5E-128 T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BV404_RS02780 2b21f8ed9e20b311efb19ad369aa2419 423 SUPERFAMILY SSF53383 17 419 9.65E-130 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase BV404_RS02780 2b21f8ed9e20b311efb19ad369aa2419 423 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 272 - T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BV404_RS02930 443e8de0ba86e0e624060c4435418adb 804 Gene3D G3DSA:2.40.160.50 404 803 1.2E-18 T 09-03-2017 BV404_RS02930 443e8de0ba86e0e624060c4435418adb 804 Pfam PF01103 Surface antigen 448 804 1.7E-90 T 09-03-2017 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020 BV404_RS02930 443e8de0ba86e0e624060c4435418adb 804 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 804 25.846 T 09-03-2017 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 BV404_RS02930 443e8de0ba86e0e624060c4435418adb 804 PIRSF PIRSF006076 1 804 1.0E-245 T 09-03-2017 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 BV404_RS02930 443e8de0ba86e0e624060c4435418adb 804 Pfam PF07244 Surface antigen variable number repeat 176 263 2.3E-16 T 09-03-2017 IPR010827 Surface antigen variable number GO:0019867 BV404_RS02930 443e8de0ba86e0e624060c4435418adb 804 Pfam PF07244 Surface antigen variable number repeat 266 344 1.8E-9 T 09-03-2017 IPR010827 Surface antigen variable number GO:0019867 BV404_RS02930 443e8de0ba86e0e624060c4435418adb 804 Pfam PF07244 Surface antigen variable number repeat 348 420 3.7E-16 T 09-03-2017 IPR010827 Surface antigen variable number GO:0019867 BV404_RS02930 443e8de0ba86e0e624060c4435418adb 804 Pfam PF07244 Surface antigen variable number repeat 92 172 1.5E-11 T 09-03-2017 IPR010827 Surface antigen variable number GO:0019867 BV404_RS02930 443e8de0ba86e0e624060c4435418adb 804 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 804 3.3E-281 T 09-03-2017 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 BV404_RS07560 9cee736482688a4f3bb76d067ddbb034 216 ProSitePatterns PS00195 Glutaredoxin active site. 3 18 - T 09-03-2017 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 BV404_RS07560 9cee736482688a4f3bb76d067ddbb034 216 SUPERFAMILY SSF52833 1 77 1.78E-16 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS07560 9cee736482688a4f3bb76d067ddbb034 216 SUPERFAMILY SSF47616 80 216 1.13E-38 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like BV404_RS07560 9cee736482688a4f3bb76d067ddbb034 216 TIGRFAM TIGR02182 GRXB: glutaredoxin, GrxB family 2 211 8.2E-60 T 09-03-2017 IPR011901 Glutaredoxin, GrxB GO:0009055|GO:0015035 BV404_RS07560 9cee736482688a4f3bb76d067ddbb034 216 Gene3D G3DSA:1.20.1050.10 92 216 4.0E-40 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like BV404_RS07560 9cee736482688a4f3bb76d067ddbb034 216 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 75 2.5E-12 T 09-03-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 BV404_RS07560 9cee736482688a4f3bb76d067ddbb034 216 Gene3D G3DSA:3.40.30.10 8 80 1.4E-23 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS07560 9cee736482688a4f3bb76d067ddbb034 216 Pfam PF04399 Glutaredoxin 2, C terminal domain 86 215 1.5E-42 T 09-03-2017 IPR007494 Glutaredoxin 2, C-terminal BV404_RS13375 2eb154e6109650715e4da6ec8102fa0a 439 Gene3D G3DSA:3.60.15.10 2 240 7.2E-45 T 09-03-2017 IPR001279 Metallo-beta-lactamase BV404_RS13375 2eb154e6109650715e4da6ec8102fa0a 439 SMART SM00849 13 222 7.1E-19 T 09-03-2017 IPR001279 Metallo-beta-lactamase BV404_RS13375 2eb154e6109650715e4da6ec8102fa0a 439 SUPERFAMILY SSF56281 1 435 3.8E-125 T 09-03-2017 IPR001279 Metallo-beta-lactamase BV404_RS13375 2eb154e6109650715e4da6ec8102fa0a 439 SMART SM01027 234 364 3.8E-55 T 09-03-2017 IPR022712 Beta-Casp domain BV404_RS13375 2eb154e6109650715e4da6ec8102fa0a 439 Pfam PF10996 Beta-Casp domain 234 364 4.6E-27 T 09-03-2017 IPR022712 Beta-Casp domain BV404_RS13375 2eb154e6109650715e4da6ec8102fa0a 439 Pfam PF00753 Metallo-beta-lactamase superfamily 15 215 1.4E-13 T 09-03-2017 IPR001279 Metallo-beta-lactamase BV404_RS13375 2eb154e6109650715e4da6ec8102fa0a 439 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 378 437 2.1E-16 T 09-03-2017 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain BV404_RS10805 c47be9a0ad4de64ba29319b7a4f5af97 485 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 289 295 - T 09-03-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BV404_RS10805 c47be9a0ad4de64ba29319b7a4f5af97 485 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 199 213 4.9E-18 T 09-03-2017 BV404_RS10805 c47be9a0ad4de64ba29319b7a4f5af97 485 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 175 191 4.9E-18 T 09-03-2017 BV404_RS10805 c47be9a0ad4de64ba29319b7a4f5af97 485 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 286 298 4.9E-18 T 09-03-2017 BV404_RS10805 c47be9a0ad4de64ba29319b7a4f5af97 485 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 313 337 4.9E-18 T 09-03-2017 BV404_RS10805 c47be9a0ad4de64ba29319b7a4f5af97 485 Pfam PF12161 HsdM N-terminal domain 3 142 2.0E-11 T 09-03-2017 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain BV404_RS10805 c47be9a0ad4de64ba29319b7a4f5af97 485 Pfam PF02384 N-6 DNA Methylase 152 452 1.1E-58 T 09-03-2017 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 BV404_RS10805 c47be9a0ad4de64ba29319b7a4f5af97 485 Gene3D G3DSA:3.40.50.150 177 401 1.1E-41 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS10805 c47be9a0ad4de64ba29319b7a4f5af97 485 SUPERFAMILY SSF53335 3 484 1.55E-113 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS07500 5f2037644fc25f2f262dd04e4e0bcd65 642 Pfam PF09423 PhoD-like phosphatase 311 579 1.2E-7 T 09-03-2017 IPR018946 Alkaline phosphatase D-related BV404_RS07500 5f2037644fc25f2f262dd04e4e0bcd65 642 Gene3D G3DSA:3.60.21.10 129 167 1.1E-5 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like BV404_RS07500 5f2037644fc25f2f262dd04e4e0bcd65 642 Gene3D G3DSA:3.60.21.10 285 355 1.1E-5 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like BV404_RS07500 5f2037644fc25f2f262dd04e4e0bcd65 642 Gene3D G3DSA:3.60.21.10 405 451 1.1E-5 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like BV404_RS07500 5f2037644fc25f2f262dd04e4e0bcd65 642 SUPERFAMILY SSF56300 313 355 1.82E-9 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like BV404_RS07500 5f2037644fc25f2f262dd04e4e0bcd65 642 SUPERFAMILY SSF56300 403 530 1.82E-9 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like BV404_RS07500 5f2037644fc25f2f262dd04e4e0bcd65 642 SUPERFAMILY SSF56300 144 185 1.82E-9 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like BV404_RS10235 1b5c0fedbe9e84e41717d7527b78e2c5 258 Gene3D G3DSA:3.40.50.720 2 257 5.4E-60 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS10235 1b5c0fedbe9e84e41717d7527b78e2c5 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 2.7E-17 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS10235 1b5c0fedbe9e84e41717d7527b78e2c5 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.7E-17 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS10235 1b5c0fedbe9e84e41717d7527b78e2c5 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.7E-17 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS10235 1b5c0fedbe9e84e41717d7527b78e2c5 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 2.7E-17 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS10235 1b5c0fedbe9e84e41717d7527b78e2c5 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.7E-17 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS10235 1b5c0fedbe9e84e41717d7527b78e2c5 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.6E-8 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS10235 1b5c0fedbe9e84e41717d7527b78e2c5 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.6E-8 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS10235 1b5c0fedbe9e84e41717d7527b78e2c5 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.6E-8 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS10235 1b5c0fedbe9e84e41717d7527b78e2c5 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BV404_RS10235 1b5c0fedbe9e84e41717d7527b78e2c5 258 Pfam PF00106 short chain dehydrogenase 2 196 3.7E-46 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS10235 1b5c0fedbe9e84e41717d7527b78e2c5 258 SUPERFAMILY SSF51735 2 257 1.0E-60 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS05950 7b79bdc39c52b44d3ce6932764fea5fd 262 Pfam PF00005 ABC transporter 31 179 4.4E-32 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS05950 7b79bdc39c52b44d3ce6932764fea5fd 262 Gene3D G3DSA:3.40.50.300 2 253 8.1E-68 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS05950 7b79bdc39c52b44d3ce6932764fea5fd 262 SUPERFAMILY SSF52540 4 252 5.92E-59 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS05950 7b79bdc39c52b44d3ce6932764fea5fd 262 SMART SM00382 39 228 1.1E-14 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS18775 d873536d7ef8538539e837c9e29a8b81 148 PRINTS PR01805 VacJ lipoprotein signature 14 31 6.4E-15 T 09-03-2017 IPR007428 MlaA lipoprotein GO:0016020 BV404_RS18775 d873536d7ef8538539e837c9e29a8b81 148 PRINTS PR01805 VacJ lipoprotein signature 51 68 6.4E-15 T 09-03-2017 IPR007428 MlaA lipoprotein GO:0016020 BV404_RS18775 d873536d7ef8538539e837c9e29a8b81 148 Pfam PF04333 MlaA lipoprotein 1 135 9.3E-40 T 09-03-2017 IPR007428 MlaA lipoprotein GO:0016020 BV404_RS14830 aec0fc0d2b4806249b8e9e556c2da518 179 SUPERFAMILY SSF64288 8 174 2.51E-43 T 09-03-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain BV404_RS14830 aec0fc0d2b4806249b8e9e556c2da518 179 Gene3D G3DSA:3.40.1410.10 11 174 2.7E-49 T 09-03-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain BV404_RS14830 aec0fc0d2b4806249b8e9e556c2da518 179 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 15 174 23.533 T 09-03-2017 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148 BV404_RS14830 aec0fc0d2b4806249b8e9e556c2da518 179 Pfam PF04345 Chorismate lyase 12 179 2.2E-56 T 09-03-2017 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148 BV404_RS07415 3c1ff9635391c81397b831a478a6c1e8 160 SUPERFAMILY SSF89963 88 160 6.8E-29 T 09-03-2017 IPR007551 Protein of unknown function DUF520 BV404_RS07415 3c1ff9635391c81397b831a478a6c1e8 160 Gene3D G3DSA:3.30.70.990 9 93 2.9E-30 T 09-03-2017 BV404_RS07415 3c1ff9635391c81397b831a478a6c1e8 160 Gene3D G3DSA:3.30.70.860 94 160 5.4E-34 T 09-03-2017 BV404_RS07415 3c1ff9635391c81397b831a478a6c1e8 160 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 160 29.749 T 09-03-2017 IPR007551 Protein of unknown function DUF520 BV404_RS07415 3c1ff9635391c81397b831a478a6c1e8 160 SUPERFAMILY SSF89963 2 85 8.11E-31 T 09-03-2017 IPR007551 Protein of unknown function DUF520 BV404_RS07415 3c1ff9635391c81397b831a478a6c1e8 160 Pfam PF04461 Protein of unknown function (DUF520) 2 159 3.1E-64 T 09-03-2017 IPR007551 Protein of unknown function DUF520 BV404_RS11155 15ed5e1c4b1c76eb307c915cf7f899f2 269 SUPERFAMILY SSF69572 9 267 6.54E-64 T 09-03-2017 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 BV404_RS11155 15ed5e1c4b1c76eb307c915cf7f899f2 269 Gene3D G3DSA:3.40.50.720 5 266 2.4E-55 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS11155 15ed5e1c4b1c76eb307c915cf7f899f2 269 Pfam PF00899 ThiF family 23 208 2.5E-38 T 09-03-2017 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 BV404_RS03980 0a267d1ad2e85e85c2102a6ef68f6371 183 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 176 1.7E-71 T 09-03-2017 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 BV404_RS03980 0a267d1ad2e85e85c2102a6ef68f6371 183 ProSitePatterns PS00194 Thioredoxin family active site. 71 89 - T 09-03-2017 IPR017937 Thioredoxin, conserved site GO:0045454 BV404_RS03980 0a267d1ad2e85e85c2102a6ef68f6371 183 Gene3D G3DSA:3.40.30.10 10 176 8.0E-42 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS03980 0a267d1ad2e85e85c2102a6ef68f6371 183 Pfam PF08534 Redoxin 41 165 1.0E-25 T 09-03-2017 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 BV404_RS03980 0a267d1ad2e85e85c2102a6ef68f6371 183 SUPERFAMILY SSF52833 46 178 2.7E-39 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS02270 ac0a6e39305b69dbd8944eb579ec9c0c 315 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 10 218 1.9E-86 T 09-03-2017 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 BV404_RS02270 ac0a6e39305b69dbd8944eb579ec9c0c 315 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 308 18.719 T 09-03-2017 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 BV404_RS02270 ac0a6e39305b69dbd8944eb579ec9c0c 315 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 251 308 2.2E-17 T 09-03-2017 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 BV404_RS02270 ac0a6e39305b69dbd8944eb579ec9c0c 315 SUPERFAMILY SSF55120 9 248 7.77E-82 T 09-03-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 BV404_RS02270 ac0a6e39305b69dbd8944eb579ec9c0c 315 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 248 2.3E-24 T 09-03-2017 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 BV404_RS02270 ac0a6e39305b69dbd8944eb579ec9c0c 315 Gene3D G3DSA:2.30.130.10 249 310 1.1E-24 T 09-03-2017 IPR015947 PUA-like domain BV404_RS02270 ac0a6e39305b69dbd8944eb579ec9c0c 315 SUPERFAMILY SSF88697 250 309 3.68E-14 T 09-03-2017 IPR015947 PUA-like domain BV404_RS02270 ac0a6e39305b69dbd8944eb579ec9c0c 315 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 179 4.8E-56 T 09-03-2017 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 BV404_RS03120 7d598eda771dbf41a2f17a19fca69be6 124 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 76 87 - T 09-03-2017 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 BV404_RS03120 7d598eda771dbf41a2f17a19fca69be6 124 Gene3D G3DSA:1.10.3830.10 10 124 8.0E-44 T 09-03-2017 BV404_RS03120 7d598eda771dbf41a2f17a19fca69be6 124 Pfam PF01219 Prokaryotic diacylglycerol kinase 22 123 1.2E-34 T 09-03-2017 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 BV404_RS04160 7a7c06818e89f1efdb17620f775f3fe9 71 PIRSF PIRSF006188 1 71 8.4E-36 T 09-03-2017 IPR009857 Uncharacterised protein family UPF0352 BV404_RS04160 7a7c06818e89f1efdb17620f775f3fe9 71 SUPERFAMILY SSF158651 1 70 1.28E-28 T 09-03-2017 BV404_RS04160 7a7c06818e89f1efdb17620f775f3fe9 71 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 2.0E-28 T 09-03-2017 IPR009857 Uncharacterised protein family UPF0352 BV404_RS04160 7a7c06818e89f1efdb17620f775f3fe9 71 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 23.16 T 09-03-2017 IPR009857 Uncharacterised protein family UPF0352 BV404_RS04160 7a7c06818e89f1efdb17620f775f3fe9 71 Gene3D G3DSA:1.10.3390.10 1 70 4.8E-33 T 09-03-2017 IPR023202 YejL-like domain BV404_RS04160 7a7c06818e89f1efdb17620f775f3fe9 71 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 2.7E-20 T 09-03-2017 IPR009857 Uncharacterised protein family UPF0352 BV404_RS05845 dd5c10ea9f33c6df3071429629ead313 323 SUPERFAMILY SSF53335 91 323 7.99E-38 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS05845 dd5c10ea9f33c6df3071429629ead313 323 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 13 322 54.985 T 09-03-2017 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 BV404_RS05845 dd5c10ea9f33c6df3071429629ead313 323 Gene3D G3DSA:3.40.50.150 111 321 1.1E-27 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS05845 dd5c10ea9f33c6df3071429629ead313 323 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 13 321 1.4E-148 T 09-03-2017 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 BV404_RS05845 dd5c10ea9f33c6df3071429629ead313 323 Pfam PF08003 Protein of unknown function (DUF1698) 8 322 1.2E-170 T 09-03-2017 IPR027555 tRNA (mo5U34)-methyltransferase-like BV404_RS07445 4587d23f50d275dfa1da8b11bc05cba1 718 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 238 505 2.5E-15 T 09-03-2017 IPR018712 Domain of unknown function DUF2235 BV404_RS06990 6400cd60fc67d9cecd5783a2b3426763 236 SMART SM00382 29 201 1.3E-7 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS06990 6400cd60fc67d9cecd5783a2b3426763 236 Pfam PF00005 ABC transporter 25 164 3.8E-28 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS06990 6400cd60fc67d9cecd5783a2b3426763 236 SUPERFAMILY SSF52540 5 224 4.89E-49 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS06990 6400cd60fc67d9cecd5783a2b3426763 236 Gene3D G3DSA:3.40.50.300 3 233 4.8E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS06990 6400cd60fc67d9cecd5783a2b3426763 236 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS06145 85d847027e19cbec0a2a5f56510a09ee 100 SUPERFAMILY SSF54909 6 72 6.21E-9 T 09-03-2017 IPR011008 Dimeric alpha-beta barrel BV404_RS06145 85d847027e19cbec0a2a5f56510a09ee 100 Pfam PF08803 Putative mono-oxygenase ydhR 17 90 1.1E-7 T 09-03-2017 IPR014910 Putative monooxygenase YdhR BV404_RS11225 38da725738d29a3b7d1294ea69d76054 365 Gene3D G3DSA:3.40.630.30 2 145 3.4E-30 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS11225 38da725738d29a3b7d1294ea69d76054 365 Pfam PF11814 Peptidase_C39 like family 157 359 1.1E-79 T 09-03-2017 IPR021770 Protein of unknown function DUF3335 BV404_RS11225 38da725738d29a3b7d1294ea69d76054 365 SUPERFAMILY SSF55729 2 149 3.21E-29 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS11225 38da725738d29a3b7d1294ea69d76054 365 Pfam PF13673 Acetyltransferase (GNAT) domain 20 126 1.3E-16 T 09-03-2017 IPR000182 GNAT domain GO:0008080 BV404_RS05990 609e057af6af8c33900ad918c88aa0c2 129 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 3 129 3.1E-46 T 09-03-2017 IPR014320 Phage shock protein, PspC BV404_RS05990 609e057af6af8c33900ad918c88aa0c2 129 Pfam PF04024 PspC domain 4 62 9.3E-16 T 09-03-2017 IPR007168 Phage shock protein, PspC, N-terminal BV404_RS14585 774c78728abe3966edc43d2f25bb0c56 144 SUPERFAMILY SSF55729 1 126 4.53E-18 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS14585 774c78728abe3966edc43d2f25bb0c56 144 Gene3D G3DSA:3.40.630.30 5 126 4.2E-17 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS14585 774c78728abe3966edc43d2f25bb0c56 144 Pfam PF00583 Acetyltransferase (GNAT) family 44 119 9.5E-6 T 09-03-2017 IPR000182 GNAT domain GO:0008080 BV404_RS00735 acee86ff0a1d5ed1948adc1cc828cf99 87 Pfam PF12292 Protein of unknown function (DUF3624) 1 79 4.1E-37 T 09-03-2017 IPR022072 Protein of unknown function DUF3624 BV404_RS12350 f77035bdb00e2424ee136ed9d6c832c5 375 SUPERFAMILY SSF53955 178 370 1.69E-37 T 09-03-2017 IPR023346 Lysozyme-like domain BV404_RS12350 f77035bdb00e2424ee136ed9d6c832c5 375 Pfam PF11873 Domain of unknown function (DUF3393) 4 205 1.3E-76 T 09-03-2017 IPR024570 Murein transglycosylase-C, N-terminal BV404_RS12350 f77035bdb00e2424ee136ed9d6c832c5 375 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 228 256 - T 09-03-2017 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 BV404_RS12350 f77035bdb00e2424ee136ed9d6c832c5 375 Gene3D G3DSA:1.10.530.10 177 373 8.1E-43 T 09-03-2017 BV404_RS12350 f77035bdb00e2424ee136ed9d6c832c5 375 Pfam PF01464 Transglycosylase SLT domain 211 334 6.4E-29 T 09-03-2017 IPR008258 Transglycosylase SLT domain 1 BV404_RS01875 b39e65f1b499c490e9d36d4976d5983a 273 Pfam PF00149 Calcineurin-like phosphoesterase 14 205 1.9E-13 T 09-03-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 BV404_RS01875 b39e65f1b499c490e9d36d4976d5983a 273 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 13 259 41.674 T 09-03-2017 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 BV404_RS01875 b39e65f1b499c490e9d36d4976d5983a 273 SUPERFAMILY SSF56300 11 258 3.97E-59 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like BV404_RS01875 b39e65f1b499c490e9d36d4976d5983a 273 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 204 259 3.0E-22 T 09-03-2017 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 BV404_RS01875 b39e65f1b499c490e9d36d4976d5983a 273 Gene3D G3DSA:3.60.21.10 10 257 5.7E-44 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like BV404_RS15830 b9f01f63aa188d782a5faf479d261eec 157 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 83 157 5.1E-20 T 09-03-2017 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 BV404_RS15830 b9f01f63aa188d782a5faf479d261eec 157 Gene3D G3DSA:3.10.50.40 59 157 4.7E-35 T 09-03-2017 BV404_RS15830 b9f01f63aa188d782a5faf479d261eec 157 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 2 74 1.5E-15 T 09-03-2017 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 BV404_RS15830 b9f01f63aa188d782a5faf479d261eec 157 Gene3D G3DSA:1.10.287.460 1 58 5.8E-12 T 09-03-2017 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 BV404_RS15830 b9f01f63aa188d782a5faf479d261eec 157 SUPERFAMILY SSF54534 11 157 1.2E-43 T 09-03-2017 BV404_RS06605 c418f799e8cb2e6df1588d9f60f1efd7 459 Pfam PF04317 YcjX-like family, DUF463 20 458 1.4E-187 T 09-03-2017 IPR007413 Protein of unknown function DUF463, YcjX-like protein BV404_RS06605 c418f799e8cb2e6df1588d9f60f1efd7 459 PIRSF PIRSF019381 1 459 1.4E-198 T 09-03-2017 IPR007413 Protein of unknown function DUF463, YcjX-like protein BV404_RS10525 7ce899128b8f042745cde3d1671ab60b 756 SUPERFAMILY SSF48452 160 361 3.57E-13 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BV404_RS10525 7ce899128b8f042745cde3d1671ab60b 756 Gene3D G3DSA:1.25.40.10 174 439 2.0E-14 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BV404_RS10525 7ce899128b8f042745cde3d1671ab60b 756 SMART SM00028 331 364 140.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 BV404_RS10525 7ce899128b8f042745cde3d1671ab60b 756 SMART SM00028 251 284 57.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 BV404_RS10525 7ce899128b8f042745cde3d1671ab60b 756 SMART SM00028 291 324 0.001 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 BV404_RS14675 ff59c3e67aaa45df6b1dd2270cdba693 234 Pfam PF04340 Protein of unknown function, DUF484 6 222 8.9E-74 T 09-03-2017 IPR007435 Protein of unknown function DUF484 BV404_RS05875 489dc27ce5c3a92ead6fdb10d064c5d4 276 SUPERFAMILY SSF51735 2 266 1.01E-24 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS05875 489dc27ce5c3a92ead6fdb10d064c5d4 276 Gene3D G3DSA:3.40.50.720 1 228 4.2E-21 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS05875 489dc27ce5c3a92ead6fdb10d064c5d4 276 Pfam PF13460 NAD(P)H-binding 9 178 7.1E-14 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS11045 934a692f0eaaf873d517a1612c130a34 232 Gene3D G3DSA:1.20.58.220 6 113 2.3E-37 T 09-03-2017 BV404_RS11045 934a692f0eaaf873d517a1612c130a34 232 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 10 219 9.2E-76 T 09-03-2017 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 BV404_RS11045 934a692f0eaaf873d517a1612c130a34 232 PIRSF PIRSF003107 4 223 4.4E-70 T 09-03-2017 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 BV404_RS11045 934a692f0eaaf873d517a1612c130a34 232 Pfam PF01895 PhoU domain 128 210 1.4E-16 T 09-03-2017 IPR026022 PhoU domain BV404_RS11045 934a692f0eaaf873d517a1612c130a34 232 Pfam PF01895 PhoU domain 23 108 6.8E-22 T 09-03-2017 IPR026022 PhoU domain BV404_RS11045 934a692f0eaaf873d517a1612c130a34 232 Gene3D G3DSA:1.20.58.220 123 223 3.8E-30 T 09-03-2017 BV404_RS11045 934a692f0eaaf873d517a1612c130a34 232 SUPERFAMILY SSF109755 10 226 4.29E-70 T 09-03-2017 BV404_RS04680 f8518d1d09bc7e1185bc0c22b468d835 252 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 179 194 - T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BV404_RS04680 f8518d1d09bc7e1185bc0c22b468d835 252 Pfam PF00813 FliP family 54 246 6.3E-75 T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BV404_RS04680 f8518d1d09bc7e1185bc0c22b468d835 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 91 110 7.0E-65 T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BV404_RS04680 f8518d1d09bc7e1185bc0c22b468d835 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 71 91 7.0E-65 T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BV404_RS04680 f8518d1d09bc7e1185bc0c22b468d835 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 200 221 7.0E-65 T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BV404_RS04680 f8518d1d09bc7e1185bc0c22b468d835 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 52 71 7.0E-65 T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BV404_RS04680 f8518d1d09bc7e1185bc0c22b468d835 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 224 249 7.0E-65 T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BV404_RS04680 f8518d1d09bc7e1185bc0c22b468d835 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 179 199 7.0E-65 T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BV404_RS04680 f8518d1d09bc7e1185bc0c22b468d835 252 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 54 250 3.0E-76 T 09-03-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BV404_RS04680 f8518d1d09bc7e1185bc0c22b468d835 252 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 227 239 - T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BV404_RS04680 f8518d1d09bc7e1185bc0c22b468d835 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 172 184 6.9E-15 T 09-03-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BV404_RS04680 f8518d1d09bc7e1185bc0c22b468d835 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 110 122 6.9E-15 T 09-03-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BV404_RS04680 f8518d1d09bc7e1185bc0c22b468d835 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 150 162 6.9E-15 T 09-03-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BV404_RS04680 f8518d1d09bc7e1185bc0c22b468d835 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 240 250 6.9E-15 T 09-03-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BV404_RS04680 f8518d1d09bc7e1185bc0c22b468d835 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 50 59 6.9E-15 T 09-03-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BV404_RS04680 f8518d1d09bc7e1185bc0c22b468d835 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 122 136 6.9E-15 T 09-03-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BV404_RS14085 6bb4f70344ffebaaa163527cb024302c 82 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 09-03-2017 IPR001455 TusA-like domain BV404_RS14085 6bb4f70344ffebaaa163527cb024302c 82 Hamap MF_00413 Sulfurtransferase TusA [tusA]. 3 81 28.585 T 09-03-2017 IPR022931 Sulphurtransferase TusA GO:0016783 BV404_RS14085 6bb4f70344ffebaaa163527cb024302c 82 Gene3D G3DSA:3.30.110.40 9 80 1.8E-27 T 09-03-2017 IPR001455 TusA-like domain BV404_RS14085 6bb4f70344ffebaaa163527cb024302c 82 Pfam PF01206 Sulfurtransferase TusA 12 79 3.4E-22 T 09-03-2017 IPR001455 TusA-like domain BV404_RS14085 6bb4f70344ffebaaa163527cb024302c 82 SUPERFAMILY SSF64307 9 80 7.19E-24 T 09-03-2017 IPR001455 TusA-like domain BV404_RS05280 4dba7f09f6180fe39ce881c1d3242662 462 SUPERFAMILY SSF56935 57 462 1.21E-109 T 09-03-2017 BV404_RS05280 4dba7f09f6180fe39ce881c1d3242662 462 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 63 458 8.0E-119 T 09-03-2017 IPR003192 Porin, LamB type GO:0006810|GO:0016020 BV404_RS05280 4dba7f09f6180fe39ce881c1d3242662 462 Pfam PF02264 LamB porin 59 462 2.3E-99 T 09-03-2017 IPR003192 Porin, LamB type GO:0006810|GO:0016020 BV404_RS05280 4dba7f09f6180fe39ce881c1d3242662 462 Gene3D G3DSA:2.40.170.10 56 462 4.6E-127 T 09-03-2017 IPR003192 Porin, LamB type GO:0006810|GO:0016020 BV404_RS05280 4dba7f09f6180fe39ce881c1d3242662 462 Pfam PF11471 Maltoporin periplasmic N-terminal extension 1 55 3.3E-16 T 09-03-2017 IPR021570 LamB-type porin N-terminal domain BV404_RS01415 f911f754c181cad59dd49c7dc988d6a7 356 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 354 1.3E-132 T 09-03-2017 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 BV404_RS01415 f911f754c181cad59dd49c7dc988d6a7 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 354 5.2E-70 T 09-03-2017 IPR005495 Permease LptG/LptF-related GO:0016021 BV404_RS08055 1213accda67881ace0300ad9f82268e7 215 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 5 214 1.9E-80 T 09-03-2017 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 BV404_RS08055 1213accda67881ace0300ad9f82268e7 215 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 2 215 36.136 T 09-03-2017 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 BV404_RS08055 1213accda67881ace0300ad9f82268e7 215 SUPERFAMILY SSF53335 3 213 1.56E-54 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS08055 1213accda67881ace0300ad9f82268e7 215 PIRSF PIRSF023956 1 215 6.1E-75 T 09-03-2017 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 BV404_RS08055 1213accda67881ace0300ad9f82268e7 215 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 3 214 9.6E-75 T 09-03-2017 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 BV404_RS08055 1213accda67881ace0300ad9f82268e7 215 Gene3D G3DSA:3.40.50.150 17 214 3.6E-58 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS15935 f6fe0766163289b5cda989215c3a9f3a 197 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 11 196 5.2E-30 T 09-03-2017 IPR007452 Translocation and assembly module TamB BV404_RS05305 953f7fbc8c1258a55dd79b3518218e9e 154 SUPERFAMILY SSF54637 5 143 1.81E-28 T 09-03-2017 IPR029069 HotDog domain BV404_RS05305 953f7fbc8c1258a55dd79b3518218e9e 154 PIRSF PIRSF020565 1 154 1.0E-60 T 09-03-2017 IPR016776 3-hydroxylacyl-(acyl carrier protein) dehydratase, predicted BV404_RS05305 953f7fbc8c1258a55dd79b3518218e9e 154 Gene3D G3DSA:3.10.129.10 4 139 1.0E-20 T 09-03-2017 IPR029069 HotDog domain BV404_RS07900 2d9d484a7f4c5480ad16d5781ad88ebd 289 Pfam PF03466 LysR substrate binding domain 88 287 2.5E-45 T 09-03-2017 IPR005119 LysR, substrate-binding BV404_RS07900 2d9d484a7f4c5480ad16d5781ad88ebd 289 Gene3D G3DSA:1.10.10.10 1 85 1.1E-28 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS07900 2d9d484a7f4c5480ad16d5781ad88ebd 289 SUPERFAMILY SSF53850 89 288 4.34E-40 T 09-03-2017 BV404_RS07900 2d9d484a7f4c5480ad16d5781ad88ebd 289 SUPERFAMILY SSF46785 1 85 4.91E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS07900 2d9d484a7f4c5480ad16d5781ad88ebd 289 Gene3D G3DSA:3.40.190.10 176 260 6.5E-18 T 09-03-2017 BV404_RS07900 2d9d484a7f4c5480ad16d5781ad88ebd 289 Gene3D G3DSA:3.40.190.10 90 175 1.0E-19 T 09-03-2017 BV404_RS07900 2d9d484a7f4c5480ad16d5781ad88ebd 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 3.5E-20 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS07900 2d9d484a7f4c5480ad16d5781ad88ebd 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.2E-9 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS07900 2d9d484a7f4c5480ad16d5781ad88ebd 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.2E-9 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS07900 2d9d484a7f4c5480ad16d5781ad88ebd 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.2E-9 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS09475 41c3259387294d6586105380158c722c 94 Pfam PF07023 Protein of unknown function (DUF1315) 5 84 2.1E-28 T 09-03-2017 IPR009749 Protein of unknown function DUF1315 BV404_RS04885 213b135bc381629fb34270688ed36e73 270 Pfam PF12833 Helix-turn-helix domain 178 255 9.0E-16 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BV404_RS04885 213b135bc381629fb34270688ed36e73 270 SMART SM00342 172 254 5.4E-22 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BV404_RS04885 213b135bc381629fb34270688ed36e73 270 SUPERFAMILY SSF46689 207 256 4.18E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS04885 213b135bc381629fb34270688ed36e73 270 Gene3D G3DSA:1.10.10.60 206 253 1.1E-11 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS04885 213b135bc381629fb34270688ed36e73 270 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 208 250 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BV404_RS01760 5060ce5af6778870f392418bd128daab 241 Gene3D G3DSA:2.40.50.140 7 77 3.5E-9 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS01760 5060ce5af6778870f392418bd128daab 241 SUPERFAMILY SSF50249 6 76 1.1E-15 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS01760 5060ce5af6778870f392418bd128daab 241 SUPERFAMILY SSF57863 86 160 3.14E-11 T 09-03-2017 BV404_RS01760 5060ce5af6778870f392418bd128daab 241 Pfam PF11967 Recombination protein O N terminal 5 77 7.3E-24 T 09-03-2017 IPR022572 DNA replication/recombination mediator RecO, N-terminal BV404_RS01760 5060ce5af6778870f392418bd128daab 241 Hamap MF_00201 DNA repair protein RecO [recO]. 2 231 22.96 T 09-03-2017 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 BV404_RS01760 5060ce5af6778870f392418bd128daab 241 TIGRFAM TIGR00613 reco: DNA repair protein RecO 7 230 1.2E-42 T 09-03-2017 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 BV404_RS01760 5060ce5af6778870f392418bd128daab 241 Pfam PF02565 Recombination protein O C terminal 85 226 1.6E-23 T 09-03-2017 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 BV404_RS00180 d67d0c023530fc658ec6589a4d145c23 308 Pfam PF00583 Acetyltransferase (GNAT) family 52 123 6.0E-12 T 09-03-2017 IPR000182 GNAT domain GO:0008080 BV404_RS00180 d67d0c023530fc658ec6589a4d145c23 308 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 164 296 2.1E-44 T 09-03-2017 IPR012660 Thioesterase, putative BV404_RS00180 d67d0c023530fc658ec6589a4d145c23 308 Gene3D G3DSA:3.40.630.30 5 144 1.0E-26 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS00180 d67d0c023530fc658ec6589a4d145c23 308 Gene3D G3DSA:3.10.129.10 145 297 1.0E-62 T 09-03-2017 IPR029069 HotDog domain BV404_RS00180 d67d0c023530fc658ec6589a4d145c23 308 SUPERFAMILY SSF54637 154 296 2.95E-40 T 09-03-2017 IPR029069 HotDog domain BV404_RS00180 d67d0c023530fc658ec6589a4d145c23 308 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 157 296 2.0E-50 T 09-03-2017 IPR012660 Thioesterase, putative BV404_RS00180 d67d0c023530fc658ec6589a4d145c23 308 SUPERFAMILY SSF55729 2 154 2.09E-29 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS03570 d78bbe96deeaf8b6c537672f8f02c492 468 Gene3D G3DSA:1.10.8.60 302 373 8.9E-25 T 09-03-2017 BV404_RS03570 d78bbe96deeaf8b6c537672f8f02c492 468 SMART SM00382 149 293 3.6E-7 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS03570 d78bbe96deeaf8b6c537672f8f02c492 468 SUPERFAMILY SSF52172 3 173 1.07E-39 T 09-03-2017 IPR011006 CheY-like superfamily BV404_RS03570 d78bbe96deeaf8b6c537672f8f02c492 468 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 215 230 - T 09-03-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BV404_RS03570 d78bbe96deeaf8b6c537672f8f02c492 468 Pfam PF02954 Bacterial regulatory protein, Fis family 419 458 9.1E-13 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BV404_RS03570 d78bbe96deeaf8b6c537672f8f02c492 468 SUPERFAMILY SSF52540 137 370 5.42E-70 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS03570 d78bbe96deeaf8b6c537672f8f02c492 468 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 342 351 - T 09-03-2017 IPR025944 Sigma-54 interaction domain, conserved site BV404_RS03570 d78bbe96deeaf8b6c537672f8f02c492 468 Pfam PF00158 Sigma-54 interaction domain 134 295 1.1E-65 T 09-03-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BV404_RS03570 d78bbe96deeaf8b6c537672f8f02c492 468 Gene3D G3DSA:3.40.50.300 128 299 1.3E-52 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS03570 d78bbe96deeaf8b6c537672f8f02c492 468 Gene3D G3DSA:3.40.50.2300 3 120 3.0E-35 T 09-03-2017 BV404_RS03570 d78bbe96deeaf8b6c537672f8f02c492 468 SMART SM00448 4 115 7.8E-33 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS03570 d78bbe96deeaf8b6c537672f8f02c492 468 SUPERFAMILY SSF46689 342 459 4.93E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS03570 d78bbe96deeaf8b6c537672f8f02c492 468 Gene3D G3DSA:1.10.10.60 415 458 7.8E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS03570 d78bbe96deeaf8b6c537672f8f02c492 468 Pfam PF00072 Response regulator receiver domain 6 115 6.0E-27 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS03190 8f3fa4345336a4a73f786619f283aa48 235 Pfam PF13861 FlgD Tudor-like domain 93 229 2.9E-14 T 09-03-2017 IPR025963 FlgD Tudor-like domain BV404_RS03190 8f3fa4345336a4a73f786619f283aa48 235 Pfam PF03963 Flagellar hook capping protein - N-terminal region 20 84 6.7E-22 T 09-03-2017 IPR005648 Flagellar hook capping protein BV404_RS03190 8f3fa4345336a4a73f786619f283aa48 235 Pfam PF13860 FlgD Ig-like domain 118 184 2.0E-20 T 09-03-2017 IPR025965 FlgD Ig-like domain BV404_RS14885 9a0de804f291b13831d0b3260ebbec04 607 Gene3D G3DSA:2.170.130.10 22 154 2.5E-41 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 BV404_RS14885 9a0de804f291b13831d0b3260ebbec04 607 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 147 3.3E-29 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 BV404_RS14885 9a0de804f291b13831d0b3260ebbec04 607 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 1 607 34.618 T 09-03-2017 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 BV404_RS14885 9a0de804f291b13831d0b3260ebbec04 607 Gene3D G3DSA:2.40.170.20 161 607 7.0E-71 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 BV404_RS14885 9a0de804f291b13831d0b3260ebbec04 607 Pfam PF00593 TonB dependent receptor 387 606 1.5E-24 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 BV404_RS14885 9a0de804f291b13831d0b3260ebbec04 607 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 36 - T 09-03-2017 IPR010916 TonB box, conserved site BV404_RS14885 9a0de804f291b13831d0b3260ebbec04 607 SUPERFAMILY SSF56935 29 607 2.98E-108 T 09-03-2017 BV404_RS00050 9a0de804f291b13831d0b3260ebbec04 607 Gene3D G3DSA:2.170.130.10 22 154 2.5E-41 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 BV404_RS00050 9a0de804f291b13831d0b3260ebbec04 607 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 147 3.3E-29 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 BV404_RS00050 9a0de804f291b13831d0b3260ebbec04 607 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 1 607 34.618 T 09-03-2017 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 BV404_RS00050 9a0de804f291b13831d0b3260ebbec04 607 Gene3D G3DSA:2.40.170.20 161 607 7.0E-71 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 BV404_RS00050 9a0de804f291b13831d0b3260ebbec04 607 Pfam PF00593 TonB dependent receptor 387 606 1.5E-24 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 BV404_RS00050 9a0de804f291b13831d0b3260ebbec04 607 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 36 - T 09-03-2017 IPR010916 TonB box, conserved site BV404_RS00050 9a0de804f291b13831d0b3260ebbec04 607 SUPERFAMILY SSF56935 29 607 2.98E-108 T 09-03-2017 BV404_RS09145 c6c65870e15a9dfdd7be21d1d22cd43c 389 SMART SM00028 141 174 140.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 BV404_RS09145 c6c65870e15a9dfdd7be21d1d22cd43c 389 SMART SM00028 69 102 81.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 BV404_RS09145 c6c65870e15a9dfdd7be21d1d22cd43c 389 SMART SM00028 214 247 12.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 BV404_RS09145 c6c65870e15a9dfdd7be21d1d22cd43c 389 SMART SM00028 180 213 1.1 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 BV404_RS09145 c6c65870e15a9dfdd7be21d1d22cd43c 389 Gene3D G3DSA:1.25.40.10 33 279 7.3E-31 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BV404_RS09145 c6c65870e15a9dfdd7be21d1d22cd43c 389 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 387 37.277 T 09-03-2017 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 BV404_RS09145 c6c65870e15a9dfdd7be21d1d22cd43c 389 SUPERFAMILY SSF81901 40 276 9.68E-18 T 09-03-2017 BV404_RS09145 c6c65870e15a9dfdd7be21d1d22cd43c 389 Pfam PF13176 Tetratricopeptide repeat 71 94 0.026 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 BV404_RS04285 bcf95513cb2c2a98239a6197e1e0794b 321 Pfam PF13177 DNA polymerase III, delta subunit 11 165 1.0E-47 T 09-03-2017 BV404_RS04285 bcf95513cb2c2a98239a6197e1e0794b 321 Gene3D G3DSA:1.20.272.10 207 320 3.0E-27 T 09-03-2017 BV404_RS04285 bcf95513cb2c2a98239a6197e1e0794b 321 Gene3D G3DSA:3.40.50.300 7 165 2.1E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS04285 bcf95513cb2c2a98239a6197e1e0794b 321 SUPERFAMILY SSF52540 5 184 2.17E-41 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS04285 bcf95513cb2c2a98239a6197e1e0794b 321 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 12 192 4.2E-61 T 09-03-2017 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS04285 bcf95513cb2c2a98239a6197e1e0794b 321 SUPERFAMILY SSF48019 208 320 2.38E-17 T 09-03-2017 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 BV404_RS04285 bcf95513cb2c2a98239a6197e1e0794b 321 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 207 316 3.4E-21 T 09-03-2017 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS08335 9cb4ed67cb450ef3eda5bbbb08add83a 289 SUPERFAMILY SSF46785 4 112 9.68E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS08335 9cb4ed67cb450ef3eda5bbbb08add83a 289 Pfam PF03466 LysR substrate binding domain 89 239 5.2E-22 T 09-03-2017 IPR005119 LysR, substrate-binding BV404_RS08335 9cb4ed67cb450ef3eda5bbbb08add83a 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 8.3E-17 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS08335 9cb4ed67cb450ef3eda5bbbb08add83a 289 Gene3D G3DSA:3.40.190.10 192 237 2.9E-8 T 09-03-2017 BV404_RS08335 9cb4ed67cb450ef3eda5bbbb08add83a 289 Gene3D G3DSA:3.40.190.10 87 191 4.1E-17 T 09-03-2017 BV404_RS08335 9cb4ed67cb450ef3eda5bbbb08add83a 289 Gene3D G3DSA:1.10.10.10 4 86 4.8E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS08335 9cb4ed67cb450ef3eda5bbbb08add83a 289 SUPERFAMILY SSF53850 90 287 2.79E-23 T 09-03-2017 BV404_RS07905 93f575bcea99c958e1ec9f790eae9e5e 406 SUPERFAMILY SSF103473 5 391 5.36E-54 T 09-03-2017 IPR020846 Major facilitator superfamily domain BV404_RS07905 93f575bcea99c958e1ec9f790eae9e5e 406 Gene3D G3DSA:1.20.1250.20 11 187 3.7E-27 T 09-03-2017 BV404_RS07905 93f575bcea99c958e1ec9f790eae9e5e 406 Gene3D G3DSA:1.20.1250.20 212 387 2.1E-9 T 09-03-2017 BV404_RS07905 93f575bcea99c958e1ec9f790eae9e5e 406 Pfam PF07690 Major Facilitator Superfamily 16 352 9.4E-41 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BV404_RS01435 391e745fadb375df909e967dd2f088a1 290 Pfam PF00702 haloacid dehalogenase-like hydrolase 80 216 1.4E-7 T 09-03-2017 BV404_RS01435 391e745fadb375df909e967dd2f088a1 290 Gene3D G3DSA:3.40.50.1000 80 280 5.6E-29 T 09-03-2017 IPR023214 HAD-like domain BV404_RS01435 391e745fadb375df909e967dd2f088a1 290 SUPERFAMILY SSF56784 1 229 6.98E-31 T 09-03-2017 IPR023214 HAD-like domain BV404_RS01435 391e745fadb375df909e967dd2f088a1 290 SUPERFAMILY SSF56784 258 279 6.98E-31 T 09-03-2017 IPR023214 HAD-like domain BV404_RS01435 391e745fadb375df909e967dd2f088a1 290 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 176 216 7.4E-6 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 BV404_RS07650 afe19b6039252c632a22a3e6c7475d2b 91 Pfam PF00708 Acylphosphatase 7 90 8.4E-23 T 09-03-2017 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 BV404_RS07650 afe19b6039252c632a22a3e6c7475d2b 91 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 09-03-2017 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 BV404_RS07650 afe19b6039252c632a22a3e6c7475d2b 91 SUPERFAMILY SSF54975 2 90 1.72E-25 T 09-03-2017 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 BV404_RS07650 afe19b6039252c632a22a3e6c7475d2b 91 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 09-03-2017 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 BV404_RS07650 afe19b6039252c632a22a3e6c7475d2b 91 Gene3D G3DSA:3.30.70.100 7 90 6.5E-27 T 09-03-2017 BV404_RS09790 60170f2ba6e9b5f8e3248280e3c2b596 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 1.8E-90 T 09-03-2017 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 BV404_RS09790 60170f2ba6e9b5f8e3248280e3c2b596 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 1.0E-61 T 09-03-2017 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 BV404_RS09790 60170f2ba6e9b5f8e3248280e3c2b596 193 Hamap MF_00459 Electron transport complex subunit RsxA [rsxA]. 2 191 26.345 T 09-03-2017 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 BV404_RS09790 60170f2ba6e9b5f8e3248280e3c2b596 193 PIRSF PIRSF006102 1 193 6.4E-65 T 09-03-2017 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 BV404_RS03775 056cedb5dfacdceed11f091a5e637e31 429 Gene3D G3DSA:1.10.580.10 52 280 4.2E-99 T 09-03-2017 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 BV404_RS03775 056cedb5dfacdceed11f091a5e637e31 429 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 15 422 1.5E-240 T 09-03-2017 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 BV404_RS03775 056cedb5dfacdceed11f091a5e637e31 429 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 09-03-2017 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 BV404_RS03775 056cedb5dfacdceed11f091a5e637e31 429 PIRSF PIRSF001369 38 429 1.1E-173 T 09-03-2017 IPR024176 Citrate synthase, bacterial-type BV404_RS03775 056cedb5dfacdceed11f091a5e637e31 429 PRINTS PR00143 Citrate synthase signature 241 269 3.6E-55 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 BV404_RS03775 056cedb5dfacdceed11f091a5e637e31 429 PRINTS PR00143 Citrate synthase signature 296 316 3.6E-55 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 BV404_RS03775 056cedb5dfacdceed11f091a5e637e31 429 PRINTS PR00143 Citrate synthase signature 219 234 3.6E-55 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 BV404_RS03775 056cedb5dfacdceed11f091a5e637e31 429 PRINTS PR00143 Citrate synthase signature 359 375 3.6E-55 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 BV404_RS03775 056cedb5dfacdceed11f091a5e637e31 429 PRINTS PR00143 Citrate synthase signature 165 178 3.6E-55 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 BV404_RS03775 056cedb5dfacdceed11f091a5e637e31 429 PRINTS PR00143 Citrate synthase signature 379 393 3.6E-55 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 BV404_RS03775 056cedb5dfacdceed11f091a5e637e31 429 Gene3D G3DSA:1.10.230.10 281 373 7.7E-44 T 09-03-2017 IPR016143 Citrate synthase-like, small alpha subdomain Reactome: R-HSA-163765|Reactome: R-HSA-75105 BV404_RS03775 056cedb5dfacdceed11f091a5e637e31 429 Pfam PF00285 Citrate synthase, C-terminal domain 49 411 4.4E-135 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 BV404_RS03775 056cedb5dfacdceed11f091a5e637e31 429 SUPERFAMILY SSF48256 4 428 6.8E-171 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 BV404_RS04945 77f3a357c93186caa1ab6cbf54fc6a12 369 SUPERFAMILY SSF53756 56 360 4.39E-36 T 09-03-2017 BV404_RS04945 77f3a357c93186caa1ab6cbf54fc6a12 369 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 125 344 5.1E-11 T 09-03-2017 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 BV404_RS04945 77f3a357c93186caa1ab6cbf54fc6a12 369 Gene3D G3DSA:3.40.50.2000 235 346 9.5E-15 T 09-03-2017 BV404_RS04945 77f3a357c93186caa1ab6cbf54fc6a12 369 Gene3D G3DSA:3.40.50.2000 57 194 2.6E-14 T 09-03-2017 BV404_RS00810 74da71cd98d4147e3543b58b381c7071 338 Gene3D G3DSA:1.10.240.10 209 328 7.1E-18 T 09-03-2017 BV404_RS00810 74da71cd98d4147e3543b58b381c7071 338 Pfam PF00579 tRNA synthetases class I (W and Y) 3 289 7.7E-77 T 09-03-2017 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 BV404_RS00810 74da71cd98d4147e3543b58b381c7071 338 SUPERFAMILY SSF52374 5 334 4.42E-90 T 09-03-2017 BV404_RS00810 74da71cd98d4147e3543b58b381c7071 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 5.1E-26 T 09-03-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 BV404_RS00810 74da71cd98d4147e3543b58b381c7071 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 198 208 5.1E-26 T 09-03-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 BV404_RS00810 74da71cd98d4147e3543b58b381c7071 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 5.1E-26 T 09-03-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 BV404_RS00810 74da71cd98d4147e3543b58b381c7071 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 5.1E-26 T 09-03-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 BV404_RS00810 74da71cd98d4147e3543b58b381c7071 338 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 335 40.361 T 09-03-2017 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 BV404_RS00810 74da71cd98d4147e3543b58b381c7071 338 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 334 5.0E-106 T 09-03-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 BV404_RS00810 74da71cd98d4147e3543b58b381c7071 338 Gene3D G3DSA:3.40.50.620 4 208 1.1E-84 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS13790 b3648824b41f11ef1f4b07842ed1eb25 320 SUPERFAMILY SSF110997 71 142 9.68E-6 T 09-03-2017 IPR007730 Sporulation-related domain GO:0042834 BV404_RS13790 b3648824b41f11ef1f4b07842ed1eb25 320 SUPERFAMILY SSF56436 231 273 4.72E-5 T 09-03-2017 IPR016187 C-type lectin fold BV404_RS08060 325d9be05d761b31176ae39468e5ba13 258 SUPERFAMILY SSF81301 68 220 3.6E-13 T 09-03-2017 BV404_RS08060 325d9be05d761b31176ae39468e5ba13 258 Gene3D G3DSA:3.30.460.10 105 190 9.7E-5 T 09-03-2017 BV404_RS00170 3c285baebc9e995bf25ce7274124d6de 304 PIRSF PIRSF035875 2 292 1.9E-52 T 09-03-2017 IPR017039 Virulence factor BrkB BV404_RS00170 3c285baebc9e995bf25ce7274124d6de 304 Pfam PF03631 Virulence factor BrkB 24 271 7.8E-57 T 09-03-2017 IPR017039 Virulence factor BrkB BV404_RS00170 3c285baebc9e995bf25ce7274124d6de 304 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 12 287 23.417 T 09-03-2017 IPR023679 Uncharacterised protein family UPF0761, bacterial BV404_RS00170 3c285baebc9e995bf25ce7274124d6de 304 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 13 270 1.5E-78 T 09-03-2017 IPR017039 Virulence factor BrkB BV404_RS03060 26182186c15e5cee2fa2d253a7dbd80b 341 Pfam PF00849 RNA pseudouridylate synthase 67 193 8.1E-13 T 09-03-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BV404_RS03060 26182186c15e5cee2fa2d253a7dbd80b 341 Pfam PF01479 S4 domain 8 52 8.6E-11 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 BV404_RS03060 26182186c15e5cee2fa2d253a7dbd80b 341 SMART SM00363 7 69 1.1E-10 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 BV404_RS03060 26182186c15e5cee2fa2d253a7dbd80b 341 SUPERFAMILY SSF55120 66 227 1.67E-38 T 09-03-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 BV404_RS03060 26182186c15e5cee2fa2d253a7dbd80b 341 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 102 116 - T 09-03-2017 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 BV404_RS03060 26182186c15e5cee2fa2d253a7dbd80b 341 SUPERFAMILY SSF55174 3 98 1.55E-15 T 09-03-2017 BV404_RS03060 26182186c15e5cee2fa2d253a7dbd80b 341 Gene3D G3DSA:3.10.290.10 7 68 1.8E-24 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 BV404_RS03060 26182186c15e5cee2fa2d253a7dbd80b 341 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 71 224 1.6E-47 T 09-03-2017 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 BV404_RS14055 6f93238d35fb159b356e04405f97f884 313 SUPERFAMILY SSF56752 7 307 1.1E-105 T 09-03-2017 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 BV404_RS14055 6f93238d35fb159b356e04405f97f884 313 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 10 307 7.2E-144 T 09-03-2017 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108 BV404_RS14055 6f93238d35fb159b356e04405f97f884 313 Gene3D G3DSA:3.20.10.10 134 295 6.2E-60 T 09-03-2017 BV404_RS14055 6f93238d35fb159b356e04405f97f884 313 Gene3D G3DSA:3.30.470.10 7 130 4.3E-44 T 09-03-2017 BV404_RS14055 6f93238d35fb159b356e04405f97f884 313 Pfam PF01063 Amino-transferase class IV 36 268 1.5E-47 T 09-03-2017 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 BV404_RS14055 6f93238d35fb159b356e04405f97f884 313 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 223 - T 09-03-2017 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: R-HSA-70895 BV404_RS10910 9bd5b835bb6facc46342845862bf1124 303 SMART SM00530 20 81 0.0056 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BV404_RS10910 9bd5b835bb6facc46342845862bf1124 303 Gene3D G3DSA:1.10.260.40 14 87 4.1E-10 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 BV404_RS10910 9bd5b835bb6facc46342845862bf1124 303 Pfam PF13413 Helix-turn-helix domain 21 78 1.3E-17 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 BV404_RS10910 9bd5b835bb6facc46342845862bf1124 303 SUPERFAMILY SSF47413 16 76 1.42E-7 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 BV404_RS10910 9bd5b835bb6facc46342845862bf1124 303 Pfam PF13464 Domain of unknown function (DUF4115) 229 302 2.2E-25 T 09-03-2017 IPR025194 Domain of unknown function DUF4115 BV404_RS06745 407725491d333c25300a96dbd43e935b 865 SUPERFAMILY SSF53732 16 599 1.29E-185 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 BV404_RS06745 407725491d333c25300a96dbd43e935b 865 Pfam PF00694 Aconitase C-terminal domain 662 793 5.9E-31 T 09-03-2017 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 BV404_RS06745 407725491d333c25300a96dbd43e935b 865 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 8 864 0.0 T 09-03-2017 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 BV404_RS06745 407725491d333c25300a96dbd43e935b 865 Gene3D G3DSA:3.30.499.10 366 552 1.1E-55 T 09-03-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 BV404_RS06745 407725491d333c25300a96dbd43e935b 865 Gene3D G3DSA:3.20.19.10 611 862 3.0E-64 T 09-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel BV404_RS06745 407725491d333c25300a96dbd43e935b 865 Gene3D G3DSA:3.30.499.10 29 232 7.2E-59 T 09-03-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 BV404_RS06745 407725491d333c25300a96dbd43e935b 865 Pfam PF00330 Aconitase family (aconitate hydratase) 76 539 2.6E-146 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 BV404_RS06745 407725491d333c25300a96dbd43e935b 865 Gene3D G3DSA:3.40.1060.10 233 365 2.2E-34 T 09-03-2017 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 BV404_RS06745 407725491d333c25300a96dbd43e935b 865 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 37 861 1.8E-289 T 09-03-2017 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 BV404_RS06745 407725491d333c25300a96dbd43e935b 865 PRINTS PR00415 Aconitase family signature 211 226 1.2E-25 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 BV404_RS06745 407725491d333c25300a96dbd43e935b 865 PRINTS PR00415 Aconitase family signature 366 380 1.2E-25 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 BV404_RS06745 407725491d333c25300a96dbd43e935b 865 PRINTS PR00415 Aconitase family signature 470 483 1.2E-25 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 BV404_RS06745 407725491d333c25300a96dbd43e935b 865 PRINTS PR00415 Aconitase family signature 408 419 1.2E-25 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 BV404_RS06745 407725491d333c25300a96dbd43e935b 865 PRINTS PR00415 Aconitase family signature 168 176 1.2E-25 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 BV404_RS06745 407725491d333c25300a96dbd43e935b 865 PRINTS PR00415 Aconitase family signature 144 157 1.2E-25 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 BV404_RS06745 407725491d333c25300a96dbd43e935b 865 PRINTS PR00415 Aconitase family signature 197 210 1.2E-25 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 BV404_RS06745 407725491d333c25300a96dbd43e935b 865 PRINTS PR00415 Aconitase family signature 287 300 1.2E-25 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 BV404_RS06745 407725491d333c25300a96dbd43e935b 865 PRINTS PR00415 Aconitase family signature 273 286 1.2E-25 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 BV404_RS06745 407725491d333c25300a96dbd43e935b 865 SUPERFAMILY SSF52016 604 862 1.29E-68 T 09-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel BV404_RS05045 d6901b44e89d0243712e2018d32db49a 49 Pfam PF10617 Protein of unknown function (DUF2474) 12 48 2.6E-18 T 09-03-2017 IPR018895 Protein of unknown function DUF2474 BV404_RS08480 e9e57e7d849f3f18ec6e16f12b0c2027 476 Gene3D G3DSA:3.20.20.70 24 282 5.2E-103 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS08480 e9e57e7d849f3f18ec6e16f12b0c2027 476 Pfam PF00218 Indole-3-glycerol phosphate synthase 28 274 1.0E-96 T 09-03-2017 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 BV404_RS08480 e9e57e7d849f3f18ec6e16f12b0c2027 476 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 278 476 31.026 T 09-03-2017 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 BV404_RS08480 e9e57e7d849f3f18ec6e16f12b0c2027 476 SUPERFAMILY SSF51366 24 275 1.18E-83 T 09-03-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 BV404_RS08480 e9e57e7d849f3f18ec6e16f12b0c2027 476 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 280 470 6.6E-56 T 09-03-2017 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 BV404_RS08480 e9e57e7d849f3f18ec6e16f12b0c2027 476 SUPERFAMILY SSF51366 280 474 5.18E-56 T 09-03-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 BV404_RS08480 e9e57e7d849f3f18ec6e16f12b0c2027 476 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 73 91 - T 09-03-2017 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 BV404_RS08480 e9e57e7d849f3f18ec6e16f12b0c2027 476 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 26 277 35.775 T 09-03-2017 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 BV404_RS08480 e9e57e7d849f3f18ec6e16f12b0c2027 476 Gene3D G3DSA:3.20.20.70 283 475 1.1E-63 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS07185 2845f093d3e63da8556f19aed825d079 395 Pfam PF10442 FIST C domain 227 373 1.2E-16 T 09-03-2017 IPR019494 FIST, C-domain BV404_RS07185 2845f093d3e63da8556f19aed825d079 395 Pfam PF08495 FIST N domain 33 225 2.5E-27 T 09-03-2017 IPR013702 FIST domain, N-terminal BV404_RS07185 2845f093d3e63da8556f19aed825d079 395 SMART SM00897 29 226 1.2E-32 T 09-03-2017 IPR013702 FIST domain, N-terminal BV404_RS07185 2845f093d3e63da8556f19aed825d079 395 SMART SM01204 227 374 1.7E-27 T 09-03-2017 IPR019494 FIST, C-domain BV404_RS16060 aefc3998d9f01f588bfaf5a31c492160 200 Gene3D G3DSA:3.40.50.1010 24 71 7.0E-4 T 09-03-2017 IPR029060 PIN domain-like BV404_RS16060 aefc3998d9f01f588bfaf5a31c492160 200 Gene3D G3DSA:3.40.50.300 166 200 3.0E-5 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS16060 aefc3998d9f01f588bfaf5a31c492160 200 Pfam PF13638 PIN domain 19 70 7.8E-12 T 09-03-2017 IPR002716 PIN domain BV404_RS12005 e64557edb0b56987501933fd780667e1 201 Pfam PF02660 Glycerol-3-phosphate acyltransferase 12 184 9.3E-51 T 09-03-2017 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 BV404_RS12005 e64557edb0b56987501933fd780667e1 201 SMART SM01207 10 185 2.8E-83 T 09-03-2017 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 BV404_RS12005 e64557edb0b56987501933fd780667e1 201 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 19.191 T 09-03-2017 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 BV404_RS12005 e64557edb0b56987501933fd780667e1 201 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 2 194 2.5E-74 T 09-03-2017 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 BV404_RS04655 9ccd895dbcc9adec99bff960dce7dbb4 270 Pfam PF00563 EAL domain 31 250 2.6E-8 T 09-03-2017 IPR001633 EAL domain BV404_RS04655 9ccd895dbcc9adec99bff960dce7dbb4 270 SUPERFAMILY SSF141868 31 257 2.75E-8 T 09-03-2017 IPR001633 EAL domain BV404_RS08600 677379a240dd6108ae51ba8900bb7f17 140 SUPERFAMILY SSF54593 3 132 4.16E-27 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BV404_RS08600 677379a240dd6108ae51ba8900bb7f17 140 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 125 8.4E-17 T 09-03-2017 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BV404_RS08600 677379a240dd6108ae51ba8900bb7f17 140 Gene3D G3DSA:3.10.180.10 1 130 1.3E-23 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BV404_RS09570 79c377d3138f7555a25b11e9aac2657b 182 Gene3D G3DSA:3.40.109.10 1 181 3.5E-42 T 09-03-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BV404_RS09570 79c377d3138f7555a25b11e9aac2657b 182 PIRSF PIRSF000232 1 182 5.9E-61 T 09-03-2017 IPR026021 Putative NAD(P)H nitroreductase YdjA-like BV404_RS09570 79c377d3138f7555a25b11e9aac2657b 182 SUPERFAMILY SSF55469 1 181 2.62E-42 T 09-03-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BV404_RS09570 79c377d3138f7555a25b11e9aac2657b 182 Pfam PF00881 Nitroreductase family 8 161 5.7E-23 T 09-03-2017 IPR029479 Nitroreductase Reactome: R-HSA-209968 BV404_RS01905 6eab5fa61ccf575c1ab4b6dada495e81 202 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 197 28.049 T 09-03-2017 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24 BV404_RS01905 6eab5fa61ccf575c1ab4b6dada495e81 202 Pfam PF01121 Dephospho-CoA kinase 3 180 3.2E-73 T 09-03-2017 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24 BV404_RS01905 6eab5fa61ccf575c1ab4b6dada495e81 202 SUPERFAMILY SSF52540 1 193 6.52E-43 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS01905 6eab5fa61ccf575c1ab4b6dada495e81 202 Gene3D G3DSA:3.40.50.300 2 197 7.2E-68 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS01905 6eab5fa61ccf575c1ab4b6dada495e81 202 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 188 6.8E-68 T 09-03-2017 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24 BV404_RS14105 6e939101bc7264b4f4780358ad423521 688 Pfam PF05746 DALR anticodon binding domain 580 677 6.2E-10 T 09-03-2017 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 BV404_RS14105 6e939101bc7264b4f4780358ad423521 688 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 687 1.3E-297 T 09-03-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BV404_RS14105 6e939101bc7264b4f4780358ad423521 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 49 61 8.8E-37 T 09-03-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BV404_RS14105 6e939101bc7264b4f4780358ad423521 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 317 333 8.8E-37 T 09-03-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BV404_RS14105 6e939101bc7264b4f4780358ad423521 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 8.8E-37 T 09-03-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BV404_RS14105 6e939101bc7264b4f4780358ad423521 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 8.8E-37 T 09-03-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BV404_RS14105 6e939101bc7264b4f4780358ad423521 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 245 260 8.8E-37 T 09-03-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BV404_RS14105 6e939101bc7264b4f4780358ad423521 688 SMART SM00836 583 686 0.0019 T 09-03-2017 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 BV404_RS14105 6e939101bc7264b4f4780358ad423521 688 Gene3D G3DSA:1.10.730.10 582 676 8.7E-7 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BV404_RS14105 6e939101bc7264b4f4780358ad423521 688 SUPERFAMILY SSF109604 347 489 1.73E-11 T 09-03-2017 BV404_RS14105 6e939101bc7264b4f4780358ad423521 688 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 686 26.052 T 09-03-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BV404_RS14105 6e939101bc7264b4f4780358ad423521 688 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 549 7.1E-205 T 09-03-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BV404_RS11095 da00c44412387954353ae82206dc45a3 466 Pfam PF16325 Peptidase family U32 C-terminal domain 372 452 1.5E-21 T 09-03-2017 IPR032525 Peptidase family U32, C-terminal BV404_RS11095 da00c44412387954353ae82206dc45a3 466 Pfam PF01136 Peptidase family U32 80 355 1.6E-95 T 09-03-2017 IPR001539 Peptidase U32 GO:0006508|GO:0008233 BV404_RS11095 da00c44412387954353ae82206dc45a3 466 ProSitePatterns PS01276 Peptidase family U32 signature. 167 185 - T 09-03-2017 IPR001539 Peptidase U32 GO:0006508|GO:0008233 BV404_RS02130 879ac2da0b43a2dcae0068e01251a424 328 SUPERFAMILY SSF161098 93 324 2.62E-13 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS02130 879ac2da0b43a2dcae0068e01251a424 328 Gene3D G3DSA:1.10.3720.10 94 320 1.7E-16 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS02130 879ac2da0b43a2dcae0068e01251a424 328 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 325 1.0E-38 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS06090 2f5d09456d79124ac46d83916ea7648b 215 Gene3D G3DSA:3.40.50.300 5 199 1.3E-50 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS06090 2f5d09456d79124ac46d83916ea7648b 215 SUPERFAMILY SSF52540 6 201 5.18E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS06090 2f5d09456d79124ac46d83916ea7648b 215 SMART SM00382 28 212 7.5E-14 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS06090 2f5d09456d79124ac46d83916ea7648b 215 Pfam PF00005 ABC transporter 20 163 6.7E-31 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS06090 2f5d09456d79124ac46d83916ea7648b 215 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS09455 8f37c0e0d104847a7959a1d29204f0e6 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 229 251 2.8E-63 T 09-03-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 BV404_RS09455 8f37c0e0d104847a7959a1d29204f0e6 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 2.8E-63 T 09-03-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 BV404_RS09455 8f37c0e0d104847a7959a1d29204f0e6 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 83 105 2.8E-63 T 09-03-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 BV404_RS09455 8f37c0e0d104847a7959a1d29204f0e6 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 251 276 2.8E-63 T 09-03-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 BV404_RS09455 8f37c0e0d104847a7959a1d29204f0e6 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 2.8E-63 T 09-03-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 BV404_RS09455 8f37c0e0d104847a7959a1d29204f0e6 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 105 132 2.8E-63 T 09-03-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 BV404_RS09455 8f37c0e0d104847a7959a1d29204f0e6 277 Pfam PF00551 Formyl transferase 82 259 7.5E-50 T 09-03-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BV404_RS09455 8f37c0e0d104847a7959a1d29204f0e6 277 PIRSF PIRSF036480 1 277 3.9E-111 T 09-03-2017 BV404_RS09455 8f37c0e0d104847a7959a1d29204f0e6 277 SUPERFAMILY SSF53328 82 276 1.2E-59 T 09-03-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BV404_RS09455 8f37c0e0d104847a7959a1d29204f0e6 277 Gene3D G3DSA:3.40.50.170 82 275 4.6E-56 T 09-03-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BV404_RS09455 8f37c0e0d104847a7959a1d29204f0e6 277 SUPERFAMILY SSF55021 4 65 2.12E-8 T 09-03-2017 BV404_RS09455 8f37c0e0d104847a7959a1d29204f0e6 277 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 5 277 7.9E-123 T 09-03-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 BV404_RS09455 8f37c0e0d104847a7959a1d29204f0e6 277 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 277 44.779 T 09-03-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 BV404_RS09455 8f37c0e0d104847a7959a1d29204f0e6 277 Gene3D G3DSA:3.30.70.260 3 68 1.4E-10 T 09-03-2017 BV404_RS09455 8f37c0e0d104847a7959a1d29204f0e6 277 Pfam PF01842 ACT domain 5 64 2.7E-7 T 09-03-2017 IPR002912 ACT domain GO:0008152|GO:0016597 BV404_RS04255 b3891c58fc77ab55de47db264a0f5bd2 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 4.6E-68 T 09-03-2017 BV404_RS04255 b3891c58fc77ab55de47db264a0f5bd2 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 215 2.2E-5 T 09-03-2017 BV404_RS04255 b3891c58fc77ab55de47db264a0f5bd2 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 242 1.4E-101 T 09-03-2017 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 BV404_RS04255 b3891c58fc77ab55de47db264a0f5bd2 244 Gene3D G3DSA:3.40.50.720 1 243 2.2E-91 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS04255 b3891c58fc77ab55de47db264a0f5bd2 244 SUPERFAMILY SSF51735 4 243 1.69E-88 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS04255 b3891c58fc77ab55de47db264a0f5bd2 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 6.2E-17 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS04255 b3891c58fc77ab55de47db264a0f5bd2 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 6.2E-17 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS04255 b3891c58fc77ab55de47db264a0f5bd2 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 6.2E-17 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS04255 b3891c58fc77ab55de47db264a0f5bd2 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 6.1E-53 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS04255 b3891c58fc77ab55de47db264a0f5bd2 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 6.1E-53 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS04255 b3891c58fc77ab55de47db264a0f5bd2 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 6.1E-53 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS04255 b3891c58fc77ab55de47db264a0f5bd2 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 6.1E-53 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS04255 b3891c58fc77ab55de47db264a0f5bd2 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 6.1E-53 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS04255 b3891c58fc77ab55de47db264a0f5bd2 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 6.1E-53 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS04255 b3891c58fc77ab55de47db264a0f5bd2 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BV404_RS04510 c8c8557bc443098a388a87adaea66232 233 SMART SM00858 109 170 1.2E-4 T 09-03-2017 IPR013974 SAF domain Reactome: R-HSA-4085001 BV404_RS04510 c8c8557bc443098a388a87adaea66232 233 Pfam PF13144 Chaperone for flagella basal body P-ring formation 24 229 1.2E-40 T 09-03-2017 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal BV404_RS04510 c8c8557bc443098a388a87adaea66232 233 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 97 232 5.6E-35 T 09-03-2017 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal BV404_RS19655 d4cfee5e7e29e84e5134ce668b802cae 259 Pfam PF03773 Predicted permease 2 259 5.5E-58 T 09-03-2017 IPR005524 Predicted permease DUF318 BV404_RS09870 7f2c2a486de0cce8f98ce749a0e00bd5 308 SUPERFAMILY SSF52096 25 280 8.39E-82 T 09-03-2017 IPR029045 ClpP/crotonase-like domain BV404_RS09870 7f2c2a486de0cce8f98ce749a0e00bd5 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 1.6E-38 T 09-03-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 BV404_RS09870 7f2c2a486de0cce8f98ce749a0e00bd5 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 1.6E-38 T 09-03-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 BV404_RS09870 7f2c2a486de0cce8f98ce749a0e00bd5 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 1.6E-38 T 09-03-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 BV404_RS09870 7f2c2a486de0cce8f98ce749a0e00bd5 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 1.6E-38 T 09-03-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 BV404_RS09870 7f2c2a486de0cce8f98ce749a0e00bd5 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 1.6E-38 T 09-03-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 BV404_RS09870 7f2c2a486de0cce8f98ce749a0e00bd5 308 Pfam PF01039 Carboxyl transferase domain 102 242 1.7E-11 T 09-03-2017 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BV404_RS09870 7f2c2a486de0cce8f98ce749a0e00bd5 308 Gene3D G3DSA:3.90.226.10 19 280 2.5E-70 T 09-03-2017 IPR029045 ClpP/crotonase-like domain BV404_RS09870 7f2c2a486de0cce8f98ce749a0e00bd5 308 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 284 9.3E-137 T 09-03-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 BV404_RS09870 7f2c2a486de0cce8f98ce749a0e00bd5 308 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 36.873 T 09-03-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 BV404_RS07825 91b6f262d71d00de51a33759a975124b 256 SUPERFAMILY SSF53850 29 255 8.69E-32 T 09-03-2017 BV404_RS07825 91b6f262d71d00de51a33759a975124b 256 Gene3D G3DSA:3.40.190.10 106 199 1.1E-4 T 09-03-2017 BV404_RS07825 91b6f262d71d00de51a33759a975124b 256 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 33 238 3.5E-18 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BV404_RS07825 91b6f262d71d00de51a33759a975124b 256 Gene3D G3DSA:3.40.190.10 211 255 3.9E-10 T 09-03-2017 BV404_RS07825 91b6f262d71d00de51a33759a975124b 256 Gene3D G3DSA:3.40.190.10 33 105 3.9E-10 T 09-03-2017 BV404_RS02650 e1945fab2fa312582e297f01a260dd0b 305 Pfam PF01738 Dienelactone hydrolase family 94 303 1.9E-47 T 09-03-2017 IPR002925 Dienelactone hydrolase GO:0016787 BV404_RS02650 e1945fab2fa312582e297f01a260dd0b 305 SUPERFAMILY SSF53474 79 304 1.74E-43 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold BV404_RS02650 e1945fab2fa312582e297f01a260dd0b 305 Gene3D G3DSA:3.40.50.1820 79 304 8.3E-56 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold BV404_RS07430 0dc4ddee0931a592859b4c083f5a74c2 461 Pfam PF01235 Sodium:alanine symporter family 55 450 3.2E-139 T 09-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BV404_RS07430 0dc4ddee0931a592859b4c083f5a74c2 461 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 443 6.9E-155 T 09-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BV404_RS07430 0dc4ddee0931a592859b4c083f5a74c2 461 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 92 107 - T 09-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BV404_RS07430 0dc4ddee0931a592859b4c083f5a74c2 461 PRINTS PR00175 Sodium/alanine symporter signature 412 432 9.3E-53 T 09-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BV404_RS07430 0dc4ddee0931a592859b4c083f5a74c2 461 PRINTS PR00175 Sodium/alanine symporter signature 307 325 9.3E-53 T 09-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BV404_RS07430 0dc4ddee0931a592859b4c083f5a74c2 461 PRINTS PR00175 Sodium/alanine symporter signature 212 231 9.3E-53 T 09-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BV404_RS07430 0dc4ddee0931a592859b4c083f5a74c2 461 PRINTS PR00175 Sodium/alanine symporter signature 184 202 9.3E-53 T 09-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BV404_RS07430 0dc4ddee0931a592859b4c083f5a74c2 461 PRINTS PR00175 Sodium/alanine symporter signature 353 375 9.3E-53 T 09-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BV404_RS07430 0dc4ddee0931a592859b4c083f5a74c2 461 PRINTS PR00175 Sodium/alanine symporter signature 92 114 9.3E-53 T 09-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BV404_RS12900 f3195ac8851aecb93513d046979bb1bd 262 Gene3D G3DSA:1.10.287.460 37 140 1.2E-37 T 09-03-2017 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 BV404_RS12900 f3195ac8851aecb93513d046979bb1bd 262 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 166 252 9.0E-31 T 09-03-2017 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 BV404_RS12900 f3195ac8851aecb93513d046979bb1bd 262 Gene3D G3DSA:3.10.50.40 141 255 4.0E-47 T 09-03-2017 BV404_RS12900 f3195ac8851aecb93513d046979bb1bd 262 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 37 158 7.0E-35 T 09-03-2017 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 BV404_RS12900 f3195ac8851aecb93513d046979bb1bd 262 SUPERFAMILY SSF54534 50 254 2.95E-64 T 09-03-2017 BV404_RS09230 80cb999ee807ed1285e6deec2d43448a 224 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 28 177 3.2E-29 T 09-03-2017 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component BV404_RS00700 8363d63bd87b95dc88341023d43de6d2 179 Pfam PF03551 Transcriptional regulator PadR-like family 7 80 7.9E-16 T 09-03-2017 IPR005149 Transcription regulator PadR, N-terminal BV404_RS00700 8363d63bd87b95dc88341023d43de6d2 179 SUPERFAMILY SSF46785 3 178 2.19E-45 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS00700 8363d63bd87b95dc88341023d43de6d2 179 Gene3D G3DSA:1.10.10.10 1 87 1.5E-29 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS00700 8363d63bd87b95dc88341023d43de6d2 179 Pfam PF10400 Virulence activator alpha C-term 92 176 1.6E-14 T 09-03-2017 IPR018309 Transcription regulator PadR, C-terminal BV404_RS11440 ae6198eb624bccb420b9ab9497b7fa4b 257 Pfam PF03883 Protein of unknown function (DUF328) 1 243 4.7E-94 T 09-03-2017 IPR005583 Peroxide stress protein YaaA BV404_RS11440 ae6198eb624bccb420b9ab9497b7fa4b 257 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 38.536 T 09-03-2017 IPR005583 Peroxide stress protein YaaA BV404_RS02570 2eca731abbe62cf2ad2c2a29037abcd2 241 SUPERFAMILY SSF48452 30 119 1.94E-8 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BV404_RS02570 2eca731abbe62cf2ad2c2a29037abcd2 241 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 9 239 5.7E-79 T 09-03-2017 IPR017689 Outer membrane protein assembly factor BamD BV404_RS02570 2eca731abbe62cf2ad2c2a29037abcd2 241 Gene3D G3DSA:1.25.40.10 31 182 5.7E-6 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BV404_RS02570 2eca731abbe62cf2ad2c2a29037abcd2 241 Pfam PF13525 Outer membrane lipoprotein 26 234 2.8E-79 T 09-03-2017 BV404_RS02570 2eca731abbe62cf2ad2c2a29037abcd2 241 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 240 37.429 T 09-03-2017 IPR017689 Outer membrane protein assembly factor BamD BV404_RS04685 35201bba3c40861d666f39e089f8ce64 122 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 45 113 4.3E-20 T 09-03-2017 IPR001543 Surface presentation of antigen (SpoA) BV404_RS04685 35201bba3c40861d666f39e089f8ce64 122 Gene3D G3DSA:2.30.330.10 36 115 6.5E-26 T 09-03-2017 BV404_RS04685 35201bba3c40861d666f39e089f8ce64 122 PRINTS PR00956 Flagellar motor switch protein FliN signature 43 59 8.6E-19 T 09-03-2017 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 BV404_RS04685 35201bba3c40861d666f39e089f8ce64 122 PRINTS PR00956 Flagellar motor switch protein FliN signature 89 104 8.6E-19 T 09-03-2017 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 BV404_RS04685 35201bba3c40861d666f39e089f8ce64 122 PRINTS PR00956 Flagellar motor switch protein FliN signature 60 76 8.6E-19 T 09-03-2017 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 BV404_RS04685 35201bba3c40861d666f39e089f8ce64 122 PRINTS PR00956 Flagellar motor switch protein FliN signature 76 89 8.6E-19 T 09-03-2017 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 BV404_RS04685 35201bba3c40861d666f39e089f8ce64 122 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 41 115 2.3E-29 T 09-03-2017 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 BV404_RS04685 35201bba3c40861d666f39e089f8ce64 122 SUPERFAMILY SSF101801 40 115 8.76E-20 T 09-03-2017 IPR001543 Surface presentation of antigen (SpoA) BV404_RS11105 6d03d0a2f43654aacdfba7c51ca5b348 473 SUPERFAMILY SSF103473 4 194 2.22E-62 T 09-03-2017 IPR020846 Major facilitator superfamily domain BV404_RS11105 6d03d0a2f43654aacdfba7c51ca5b348 473 SUPERFAMILY SSF103473 247 463 2.22E-62 T 09-03-2017 IPR020846 Major facilitator superfamily domain BV404_RS11105 6d03d0a2f43654aacdfba7c51ca5b348 473 Pfam PF07690 Major Facilitator Superfamily 18 407 1.2E-48 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BV404_RS11105 6d03d0a2f43654aacdfba7c51ca5b348 473 Gene3D G3DSA:1.20.1250.20 14 187 2.1E-29 T 09-03-2017 BV404_RS11105 6d03d0a2f43654aacdfba7c51ca5b348 473 ProSitePatterns PS00217 Sugar transport proteins signature 2. 108 133 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BV404_RS11105 6d03d0a2f43654aacdfba7c51ca5b348 473 Gene3D G3DSA:1.20.1250.20 270 416 8.2E-16 T 09-03-2017 BV404_RS00330 bc482b487579b46d31c4dee70b2acbe6 459 PIRSF PIRSF002746 9 459 5.8E-148 T 09-03-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 BV404_RS00330 bc482b487579b46d31c4dee70b2acbe6 459 Pfam PF02447 GntP family permease 13 458 1.4E-120 T 09-03-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 BV404_RS00330 bc482b487579b46d31c4dee70b2acbe6 459 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 14 458 2.1E-107 T 09-03-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 BV404_RS21610 3fe62a24d8f8106de31bfc5b0ea2a12a 193 Gene3D G3DSA:2.40.50.100 3 35 1.7E-17 T 09-03-2017 BV404_RS21610 3fe62a24d8f8106de31bfc5b0ea2a12a 193 Gene3D G3DSA:2.40.50.100 159 190 1.7E-17 T 09-03-2017 BV404_RS21610 3fe62a24d8f8106de31bfc5b0ea2a12a 193 SUPERFAMILY SSF111369 4 50 6.8E-14 T 09-03-2017 BV404_RS21610 3fe62a24d8f8106de31bfc5b0ea2a12a 193 SUPERFAMILY SSF111369 138 184 6.8E-14 T 09-03-2017 BV404_RS21610 3fe62a24d8f8106de31bfc5b0ea2a12a 193 SUPERFAMILY SSF111369 86 102 6.8E-14 T 09-03-2017 BV404_RS21610 3fe62a24d8f8106de31bfc5b0ea2a12a 193 Pfam PF13533 Biotin-lipoyl like 3 49 2.0E-16 T 09-03-2017 BV404_RS04320 b368c3726b78e53d66a3e8a24a45b5d9 193 SUPERFAMILY SSF56925 21 193 5.23E-17 T 09-03-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 BV404_RS04320 b368c3726b78e53d66a3e8a24a45b5d9 193 Pfam PF13505 Outer membrane protein beta-barrel domain 8 160 3.2E-7 T 09-03-2017 IPR027385 Outer membrane protein beta-barrel BV404_RS04320 b368c3726b78e53d66a3e8a24a45b5d9 193 Gene3D G3DSA:2.40.160.20 43 193 2.6E-17 T 09-03-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 BV404_RS02365 c9772de9dae9058f4d04de06d7dfd5e7 510 Gene3D G3DSA:2.40.50.140 19 153 1.2E-34 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS02365 c9772de9dae9058f4d04de06d7dfd5e7 510 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 19 509 1.4E-200 T 09-03-2017 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BV404_RS02365 c9772de9dae9058f4d04de06d7dfd5e7 510 SUPERFAMILY SSF55681 161 507 4.38E-116 T 09-03-2017 BV404_RS02365 c9772de9dae9058f4d04de06d7dfd5e7 510 Pfam PF00152 tRNA synthetases class II (D, K and N) 161 506 1.1E-77 T 09-03-2017 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BV404_RS02365 c9772de9dae9058f4d04de06d7dfd5e7 510 Gene3D G3DSA:3.30.930.10 156 505 1.6E-117 T 09-03-2017 BV404_RS02365 c9772de9dae9058f4d04de06d7dfd5e7 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 391 407 8.1E-39 T 09-03-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BV404_RS02365 c9772de9dae9058f4d04de06d7dfd5e7 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 243 256 8.1E-39 T 09-03-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BV404_RS02365 c9772de9dae9058f4d04de06d7dfd5e7 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 214 230 8.1E-39 T 09-03-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BV404_RS02365 c9772de9dae9058f4d04de06d7dfd5e7 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 198 208 8.1E-39 T 09-03-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BV404_RS02365 c9772de9dae9058f4d04de06d7dfd5e7 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 261 278 8.1E-39 T 09-03-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BV404_RS02365 c9772de9dae9058f4d04de06d7dfd5e7 510 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 24 509 43.298 T 09-03-2017 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BV404_RS02365 c9772de9dae9058f4d04de06d7dfd5e7 510 SUPERFAMILY SSF50249 16 154 1.69E-33 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS02365 c9772de9dae9058f4d04de06d7dfd5e7 510 Pfam PF01336 OB-fold nucleic acid binding domain 73 145 9.5E-9 T 09-03-2017 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 BV404_RS12500 50640be88363bc3e207cc6d27b295662 859 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 135 667 4.5E-78 T 09-03-2017 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit BV404_RS12500 50640be88363bc3e207cc6d27b295662 859 Pfam PF11874 Domain of unknown function (DUF3394) 674 853 8.2E-68 T 09-03-2017 IPR021814 Protein of unknown function DUF3394 BV404_RS12500 50640be88363bc3e207cc6d27b295662 859 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 33 724 3.5E-211 T 09-03-2017 IPR011853 TRAP transporter, 4TM/12TM fusion protein BV404_RS05495 3e80399f8efb80a4531da9e983cee440 435 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 428 3.2E-173 T 09-03-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BV404_RS05495 3e80399f8efb80a4531da9e983cee440 435 PRINTS PR00981 Seryl-tRNA synthetase signature 327 340 2.0E-33 T 09-03-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BV404_RS05495 3e80399f8efb80a4531da9e983cee440 435 PRINTS PR00981 Seryl-tRNA synthetase signature 344 360 2.0E-33 T 09-03-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BV404_RS05495 3e80399f8efb80a4531da9e983cee440 435 PRINTS PR00981 Seryl-tRNA synthetase signature 275 287 2.0E-33 T 09-03-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BV404_RS05495 3e80399f8efb80a4531da9e983cee440 435 PRINTS PR00981 Seryl-tRNA synthetase signature 287 300 2.0E-33 T 09-03-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BV404_RS05495 3e80399f8efb80a4531da9e983cee440 435 PRINTS PR00981 Seryl-tRNA synthetase signature 362 378 2.0E-33 T 09-03-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BV404_RS05495 3e80399f8efb80a4531da9e983cee440 435 Gene3D G3DSA:1.10.287.40 1 106 7.5E-24 T 09-03-2017 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BV404_RS05495 3e80399f8efb80a4531da9e983cee440 435 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 230 411 2.3E-34 T 09-03-2017 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BV404_RS05495 3e80399f8efb80a4531da9e983cee440 435 SUPERFAMILY SSF55681 118 433 5.21E-98 T 09-03-2017 BV404_RS05495 3e80399f8efb80a4531da9e983cee440 435 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 433 40.229 T 09-03-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BV404_RS05495 3e80399f8efb80a4531da9e983cee440 435 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 109 2.0E-29 T 09-03-2017 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BV404_RS05495 3e80399f8efb80a4531da9e983cee440 435 SUPERFAMILY SSF46589 1 114 2.62E-28 T 09-03-2017 IPR010978 tRNA-binding arm GO:0000166 BV404_RS05495 3e80399f8efb80a4531da9e983cee440 435 Gene3D G3DSA:3.30.930.10 107 431 5.1E-140 T 09-03-2017 BV404_RS05495 3e80399f8efb80a4531da9e983cee440 435 PIRSF PIRSF001529 1 435 4.9E-191 T 09-03-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BV404_RS03425 5d7edf1724b9838d33ba04628c13108b 485 Pfam PF01435 Peptidase family M48 71 253 2.8E-28 T 09-03-2017 IPR001915 Peptidase M48 GO:0004222|GO:0006508 BV404_RS03425 5d7edf1724b9838d33ba04628c13108b 485 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 4 484 39.888 T 09-03-2017 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 BV404_RS03425 5d7edf1724b9838d33ba04628c13108b 485 SUPERFAMILY SSF48452 310 429 2.72E-17 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BV404_RS03425 5d7edf1724b9838d33ba04628c13108b 485 Pfam PF14559 Tetratricopeptide repeat 353 416 1.4E-9 T 09-03-2017 BV404_RS03425 5d7edf1724b9838d33ba04628c13108b 485 Gene3D G3DSA:1.25.40.10 311 458 9.6E-20 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BV404_RS03425 5d7edf1724b9838d33ba04628c13108b 485 Gene3D G3DSA:3.30.2010.10 65 148 1.3E-18 T 09-03-2017 BV404_RS09360 76b32aaa7ddac5a1d4efd11df2eda473 352 Gene3D G3DSA:3.40.50.300 3 239 9.5E-81 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09360 76b32aaa7ddac5a1d4efd11df2eda473 352 Pfam PF00005 ABC transporter 24 164 6.5E-35 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS09360 76b32aaa7ddac5a1d4efd11df2eda473 352 SUPERFAMILY SSF50331 239 348 1.05E-13 T 09-03-2017 IPR008995 Molybdate/tungstate binding, C-terminal BV404_RS09360 76b32aaa7ddac5a1d4efd11df2eda473 352 SMART SM00382 31 214 4.9E-18 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS09360 76b32aaa7ddac5a1d4efd11df2eda473 352 SUPERFAMILY SSF52540 7 244 2.73E-85 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09360 76b32aaa7ddac5a1d4efd11df2eda473 352 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS09360 76b32aaa7ddac5a1d4efd11df2eda473 352 Pfam PF08402 TOBE domain 276 326 4.1E-6 T 09-03-2017 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 BV404_RS07630 a2a293e89c997d9fc9ef1b3279c0a075 365 SUPERFAMILY SSF161098 155 345 5.49E-41 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS07630 a2a293e89c997d9fc9ef1b3279c0a075 365 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 173 359 2.6E-24 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS07630 a2a293e89c997d9fc9ef1b3279c0a075 365 Gene3D G3DSA:1.10.3720.10 155 360 1.1E-46 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS07630 a2a293e89c997d9fc9ef1b3279c0a075 365 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 155 251 6.9E-22 T 09-03-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 BV404_RS10575 c6e71712c7416f31e85aa5a342d2a965 254 Pfam PF01618 MotA/TolQ/ExbB proton channel family 99 213 7.8E-22 T 09-03-2017 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 BV404_RS10575 c6e71712c7416f31e85aa5a342d2a965 254 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 182 199 - T 09-03-2017 IPR000540 Flagellar motor protein MotA, conserved site BV404_RS14770 20dc3bb39dc6b53b98c950a1e3731f77 209 Pfam PF07947 YhhN-like protein 27 205 1.4E-32 T 09-03-2017 IPR012506 YhhN-like GO:0016021 BV404_RS08180 cf9491ef6589fc1a134d7cb2f782b98e 334 SUPERFAMILY SSF52768 13 330 1.76E-84 T 09-03-2017 BV404_RS08180 cf9491ef6589fc1a134d7cb2f782b98e 334 PIRSF PIRSF036979 25 332 5.3E-27 T 09-03-2017 IPR006035 Ureohydrolase GO:0046872 BV404_RS08180 cf9491ef6589fc1a134d7cb2f782b98e 334 Gene3D G3DSA:3.40.800.10 8 331 3.4E-112 T 09-03-2017 IPR023696 Ureohydrolase domain BV404_RS08180 cf9491ef6589fc1a134d7cb2f782b98e 334 TIGRFAM TIGR01227 hutG: formimidoylglutamase 13 326 3.9E-119 T 09-03-2017 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 BV404_RS08180 cf9491ef6589fc1a134d7cb2f782b98e 334 PRINTS PR00116 Arginase signature 125 140 7.7E-5 T 09-03-2017 IPR006035 Ureohydrolase GO:0046872 BV404_RS08180 cf9491ef6589fc1a134d7cb2f782b98e 334 PRINTS PR00116 Arginase signature 251 280 7.7E-5 T 09-03-2017 IPR006035 Ureohydrolase GO:0046872 BV404_RS08180 cf9491ef6589fc1a134d7cb2f782b98e 334 Hamap MF_00737 Formimidoylglutamase [hutG]. 8 326 43.061 T 09-03-2017 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 BV404_RS08180 cf9491ef6589fc1a134d7cb2f782b98e 334 ProSitePatterns PS01053 Arginase family signature. 254 275 - T 09-03-2017 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 BV404_RS08180 cf9491ef6589fc1a134d7cb2f782b98e 334 Pfam PF00491 Arginase family 46 324 1.3E-61 T 09-03-2017 IPR006035 Ureohydrolase GO:0046872 BV404_RS01245 211a7bd4bac79c18c57c3f9e3185d25f 92 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 4 85 5.0E-23 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like BV404_RS01245 211a7bd4bac79c18c57c3f9e3185d25f 92 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 15 22 - T 09-03-2017 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site BV404_RS01245 211a7bd4bac79c18c57c3f9e3185d25f 92 SUPERFAMILY SSF55594 5 91 8.64E-25 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like BV404_RS01245 211a7bd4bac79c18c57c3f9e3185d25f 92 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 42 57 - T 09-03-2017 IPR002114 Phosphotransferase system, HPr serine phosphorylation site BV404_RS01245 211a7bd4bac79c18c57c3f9e3185d25f 92 Pfam PF00381 PTS HPr component phosphorylation site 5 85 1.1E-23 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like BV404_RS01245 211a7bd4bac79c18c57c3f9e3185d25f 92 PRINTS PR00107 Phosphocarrier protein signature 56 73 2.8E-13 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like BV404_RS01245 211a7bd4bac79c18c57c3f9e3185d25f 92 PRINTS PR00107 Phosphocarrier protein signature 41 56 2.8E-13 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like BV404_RS01245 211a7bd4bac79c18c57c3f9e3185d25f 92 PRINTS PR00107 Phosphocarrier protein signature 15 31 2.8E-13 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like BV404_RS01245 211a7bd4bac79c18c57c3f9e3185d25f 92 Gene3D G3DSA:3.30.1340.10 5 91 6.1E-28 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like BV404_RS10660 42aeb5019ff342a8cf6003fffb87c77a 215 Gene3D G3DSA:1.10.3680.10 70 212 4.1E-25 T 09-03-2017 IPR029024 TerB-like BV404_RS10660 42aeb5019ff342a8cf6003fffb87c77a 215 Pfam PF04391 Protein of unknown function (DUF533) 37 212 3.6E-62 T 09-03-2017 IPR007486 Inner membrane protein YebE BV404_RS10660 42aeb5019ff342a8cf6003fffb87c77a 215 SUPERFAMILY SSF158682 71 214 5.89E-24 T 09-03-2017 IPR029024 TerB-like BV404_RS09235 681ccaf5ba6b3dc0038203678e2e9f76 333 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 34 318 4.4E-107 T 09-03-2017 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 BV404_RS09235 681ccaf5ba6b3dc0038203678e2e9f76 333 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 34 282 2.9E-81 T 09-03-2017 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 BV404_RS09235 681ccaf5ba6b3dc0038203678e2e9f76 333 PIRSF PIRSF006470 1 333 6.8E-123 T 09-03-2017 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 BV404_RS13635 3695855da6d86402e44db84c902294dd 316 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 9 309 3.1E-125 T 09-03-2017 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 BV404_RS13635 3695855da6d86402e44db84c902294dd 316 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 9 303 9.3E-70 T 09-03-2017 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 BV404_RS13635 3695855da6d86402e44db84c902294dd 316 PIRSF PIRSF026649 7 311 1.7E-77 T 09-03-2017 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 BV404_RS13635 3695855da6d86402e44db84c902294dd 316 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 8 313 44.06 T 09-03-2017 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 BV404_RS06330 27abc5f29f7181e7c8c4da4b07f49def 377 PIRSF PIRSF038941 1 372 2.0E-127 T 09-03-2017 IPR005730 Carboxynorspermidine decarboxylase KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 BV404_RS06330 27abc5f29f7181e7c8c4da4b07f49def 377 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 249 348 1.7E-4 T 09-03-2017 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 BV404_RS06330 27abc5f29f7181e7c8c4da4b07f49def 377 Gene3D G3DSA:2.40.37.10 236 348 1.4E-13 T 09-03-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BV404_RS06330 27abc5f29f7181e7c8c4da4b07f49def 377 SUPERFAMILY SSF51419 14 241 3.49E-41 T 09-03-2017 IPR029066 PLP-binding barrel BV404_RS06330 27abc5f29f7181e7c8c4da4b07f49def 377 Gene3D G3DSA:3.20.20.10 32 235 5.6E-17 T 09-03-2017 IPR029066 PLP-binding barrel BV404_RS06330 27abc5f29f7181e7c8c4da4b07f49def 377 SUPERFAMILY SSF50621 212 358 2.72E-22 T 09-03-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BV404_RS06330 27abc5f29f7181e7c8c4da4b07f49def 377 TIGRFAM TIGR01047 nspC: carboxynorspermidine decarboxylase 6 370 5.0E-165 T 09-03-2017 IPR005730 Carboxynorspermidine decarboxylase KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 BV404_RS04025 c33e93190c14d2ded88044aa925fee1a 419 SUPERFAMILY SSF48076 293 417 6.67E-40 T 09-03-2017 IPR011986 Extradiol ring-cleavage dioxygenase LigAB, LigA subunit BV404_RS04025 c33e93190c14d2ded88044aa925fee1a 419 Gene3D G3DSA:3.40.830.10 1 293 2.8E-100 T 09-03-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 BV404_RS04025 c33e93190c14d2ded88044aa925fee1a 419 Gene3D G3DSA:1.10.700.10 294 417 1.7E-50 T 09-03-2017 IPR011986 Extradiol ring-cleavage dioxygenase LigAB, LigA subunit BV404_RS04025 c33e93190c14d2ded88044aa925fee1a 419 SUPERFAMILY SSF53213 2 295 1.44E-84 T 09-03-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 BV404_RS04025 c33e93190c14d2ded88044aa925fee1a 419 Pfam PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit 322 408 3.5E-31 T 09-03-2017 IPR011986 Extradiol ring-cleavage dioxygenase LigAB, LigA subunit BV404_RS04025 c33e93190c14d2ded88044aa925fee1a 419 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 9 272 3.0E-58 T 09-03-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 BV404_RS02090 fb4f661094501ccb2eff6702efc6de09 470 SUPERFAMILY SSF53738 2 187 3.14E-39 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BV404_RS02090 fb4f661094501ccb2eff6702efc6de09 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 2.1E-11 T 09-03-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BV404_RS02090 fb4f661094501ccb2eff6702efc6de09 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 214 227 2.1E-11 T 09-03-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BV404_RS02090 fb4f661094501ccb2eff6702efc6de09 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 242 257 2.1E-11 T 09-03-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BV404_RS02090 fb4f661094501ccb2eff6702efc6de09 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 180 199 2.1E-11 T 09-03-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BV404_RS02090 fb4f661094501ccb2eff6702efc6de09 470 Gene3D G3DSA:3.40.120.10 2 179 5.2E-46 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BV404_RS02090 fb4f661094501ccb2eff6702efc6de09 470 Gene3D G3DSA:3.40.120.10 181 255 6.2E-24 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BV404_RS02090 fb4f661094501ccb2eff6702efc6de09 470 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 267 378 4.0E-25 T 09-03-2017 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BV404_RS02090 fb4f661094501ccb2eff6702efc6de09 470 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 419 464 3.8E-9 T 09-03-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BV404_RS02090 fb4f661094501ccb2eff6702efc6de09 470 SUPERFAMILY SSF53738 250 379 2.67E-29 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BV404_RS02090 fb4f661094501ccb2eff6702efc6de09 470 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 2 134 2.8E-37 T 09-03-2017 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BV404_RS02090 fb4f661094501ccb2eff6702efc6de09 470 Gene3D G3DSA:3.40.120.10 256 382 2.5E-34 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BV404_RS02090 fb4f661094501ccb2eff6702efc6de09 470 Gene3D G3DSA:3.30.310.50 383 468 1.1E-18 T 09-03-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BV404_RS02090 fb4f661094501ccb2eff6702efc6de09 470 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 162 262 2.6E-24 T 09-03-2017 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BV404_RS02090 fb4f661094501ccb2eff6702efc6de09 470 SUPERFAMILY SSF55957 378 468 5.1E-18 T 09-03-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BV404_RS19320 068387f9037dc470bffc995000737224 257 Gene3D G3DSA:3.30.1330.60 98 226 1.0E-16 T 09-03-2017 IPR006665 OmpA-like domain BV404_RS19320 068387f9037dc470bffc995000737224 257 SUPERFAMILY SSF103088 106 226 1.02E-17 T 09-03-2017 IPR006665 OmpA-like domain BV404_RS19320 068387f9037dc470bffc995000737224 257 Pfam PF00691 OmpA family 122 217 3.4E-11 T 09-03-2017 IPR006665 OmpA-like domain BV404_RS13610 8c445bd9207e1c56cfe05e9cfcbeb710 78 Pfam PF00830 Ribosomal L28 family 3 62 4.0E-26 T 09-03-2017 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS13610 8c445bd9207e1c56cfe05e9cfcbeb710 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 6.8E-27 T 09-03-2017 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS13610 8c445bd9207e1c56cfe05e9cfcbeb710 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.292 T 09-03-2017 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS13610 8c445bd9207e1c56cfe05e9cfcbeb710 78 Gene3D G3DSA:2.30.170.40 2 77 1.9E-35 T 09-03-2017 BV404_RS13610 8c445bd9207e1c56cfe05e9cfcbeb710 78 SUPERFAMILY SSF143800 2 76 5.49E-30 T 09-03-2017 BV404_RS05980 053e5c3d8e4d0cc231472767c45d25a9 221 Pfam PF04012 PspA/IM30 family 2 218 7.0E-62 T 09-03-2017 IPR007157 PspA/IM30 BV404_RS05980 053e5c3d8e4d0cc231472767c45d25a9 221 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 220 1.6E-94 T 09-03-2017 IPR014319 Phage shock protein, PspA BV404_RS04505 73b1f6bf91aec0d723f805a05bbc6017 93 SUPERFAMILY SSF101498 1 89 1.1E-9 T 09-03-2017 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 BV404_RS04505 73b1f6bf91aec0d723f805a05bbc6017 93 Pfam PF04316 Anti-sigma-28 factor, FlgM 42 86 9.6E-7 T 09-03-2017 IPR031316 Anti-sigma-28 factor FlgM, C-terminal BV404_RS04505 73b1f6bf91aec0d723f805a05bbc6017 93 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 90 7.6E-18 T 09-03-2017 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 BV404_RS12620 f53855ebcffa450960030082862774d3 280 Pfam PF13401 AAA domain 42 168 1.2E-21 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS12620 f53855ebcffa450960030082862774d3 280 SUPERFAMILY SSF52540 5 259 3.56E-27 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS12620 f53855ebcffa450960030082862774d3 280 Gene3D G3DSA:3.40.50.300 30 180 4.1E-15 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS03770 bb4fa7d88d577d26b8580553f408f8a5 252 SUPERFAMILY SSF102705 1 251 1.19E-81 T 09-03-2017 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 BV404_RS03770 bb4fa7d88d577d26b8580553f408f8a5 252 Gene3D G3DSA:3.40.1390.30 1 107 3.6E-39 T 09-03-2017 BV404_RS03770 bb4fa7d88d577d26b8580553f408f8a5 252 Gene3D G3DSA:3.40.1390.30 108 219 1.2E-27 T 09-03-2017 BV404_RS03770 bb4fa7d88d577d26b8580553f408f8a5 252 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 251 1.3E-66 T 09-03-2017 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 BV404_RS03770 bb4fa7d88d577d26b8580553f408f8a5 252 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 7 238 3.4E-58 T 09-03-2017 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 BV404_RS13675 c1efa021bb219201a7472cae66f9c266 309 Gene3D G3DSA:3.40.50.1980 133 304 6.9E-43 T 09-03-2017 BV404_RS13675 c1efa021bb219201a7472cae66f9c266 309 Pfam PF01497 Periplasmic binding protein 47 276 4.4E-24 T 09-03-2017 IPR002491 ABC transporter periplasmic binding domain GO:0005488 BV404_RS13675 c1efa021bb219201a7472cae66f9c266 309 Gene3D G3DSA:3.40.50.1980 41 129 8.7E-32 T 09-03-2017 BV404_RS13675 c1efa021bb219201a7472cae66f9c266 309 SUPERFAMILY SSF53807 27 299 3.41E-49 T 09-03-2017 BV404_RS13675 c1efa021bb219201a7472cae66f9c266 309 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 283 296 8.4E-8 T 09-03-2017 IPR008091 Ferrichrome-binding periplasmic protein BV404_RS13675 c1efa021bb219201a7472cae66f9c266 309 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 63 81 8.4E-8 T 09-03-2017 IPR008091 Ferrichrome-binding periplasmic protein BV404_RS13675 c1efa021bb219201a7472cae66f9c266 309 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 94 109 8.4E-8 T 09-03-2017 IPR008091 Ferrichrome-binding periplasmic protein BV404_RS10380 ce1893d78692c0279927bbedbe63a20d 335 Gene3D G3DSA:3.40.50.720 1 223 1.7E-70 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS10380 ce1893d78692c0279927bbedbe63a20d 335 Gene3D G3DSA:3.90.25.10 259 330 9.8E-19 T 09-03-2017 BV404_RS10380 ce1893d78692c0279927bbedbe63a20d 335 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 6.2E-56 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS10380 ce1893d78692c0279927bbedbe63a20d 335 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 1.5E-28 T 09-03-2017 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 BV404_RS10380 ce1893d78692c0279927bbedbe63a20d 335 PRINTS PR01713 Nucleotide sugar epimerase signature 215 230 1.5E-28 T 09-03-2017 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 BV404_RS10380 ce1893d78692c0279927bbedbe63a20d 335 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 1.5E-28 T 09-03-2017 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 BV404_RS10380 ce1893d78692c0279927bbedbe63a20d 335 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 1.5E-28 T 09-03-2017 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 BV404_RS10380 ce1893d78692c0279927bbedbe63a20d 335 SUPERFAMILY SSF51735 1 333 7.45E-89 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS14145 39c57631923b776cd7aed82b229d6706 223 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 112 5.5E-25 T 09-03-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 BV404_RS14145 39c57631923b776cd7aed82b229d6706 223 SUPERFAMILY SSF161098 13 203 2.22E-43 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS14145 39c57631923b776cd7aed82b229d6706 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 217 1.1E-17 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS14145 39c57631923b776cd7aed82b229d6706 223 Gene3D G3DSA:1.10.3720.10 15 219 1.0E-45 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS09805 ba0361a1e1b62a36b2a6f07457ae09e8 348 Pfam PF03116 NQR2, RnfD, RnfE family 6 347 1.0E-107 T 09-03-2017 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 BV404_RS09805 ba0361a1e1b62a36b2a6f07457ae09e8 348 Hamap MF_00462 Electron transport complex subunit RsxD [rsxD]. 3 348 27.73 T 09-03-2017 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 BV404_RS09805 ba0361a1e1b62a36b2a6f07457ae09e8 348 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 348 2.1E-141 T 09-03-2017 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 BV404_RS13955 82c79aa849d418fab2af0a6f5f5ddeac 195 SUPERFAMILY SSF57783 67 106 9.35E-14 T 09-03-2017 BV404_RS13955 82c79aa849d418fab2af0a6f5f5ddeac 195 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 22 58 4.2E-14 T 09-03-2017 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 BV404_RS13955 82c79aa849d418fab2af0a6f5f5ddeac 195 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 68 102 1.5E-16 T 09-03-2017 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 BV404_RS13955 82c79aa849d418fab2af0a6f5f5ddeac 195 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 115 152 3.4E-13 T 09-03-2017 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 BV404_RS13955 82c79aa849d418fab2af0a6f5f5ddeac 195 SUPERFAMILY SSF57783 109 147 7.14E-5 T 09-03-2017 BV404_RS13955 82c79aa849d418fab2af0a6f5f5ddeac 195 SUPERFAMILY SSF57783 18 65 4.59E-14 T 09-03-2017 BV404_RS13955 82c79aa849d418fab2af0a6f5f5ddeac 195 Gene3D G3DSA:3.30.65.10 18 61 2.1E-14 T 09-03-2017 BV404_RS13955 82c79aa849d418fab2af0a6f5f5ddeac 195 Gene3D G3DSA:3.30.65.10 107 147 9.8E-7 T 09-03-2017 BV404_RS13955 82c79aa849d418fab2af0a6f5f5ddeac 195 Gene3D G3DSA:3.30.65.10 68 103 1.2E-14 T 09-03-2017 BV404_RS08635 83a00fe69170a3240a43bc670de6b2e8 777 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 369 389 - T 09-03-2017 IPR020612 Methylthiotransferase, conserved site GO:0051539 BV404_RS08635 83a00fe69170a3240a43bc670de6b2e8 777 Pfam PF08497 Radical SAM N-terminal 22 368 9.7E-144 T 09-03-2017 IPR013704 Uncharacterised protein family UPF0313, N-terminal BV404_RS08635 83a00fe69170a3240a43bc670de6b2e8 777 Gene3D G3DSA:3.80.30.20 363 630 1.4E-48 T 09-03-2017 IPR023404 Radical SAM, alpha/beta horseshoe BV404_RS08635 83a00fe69170a3240a43bc670de6b2e8 777 SMART SM00729 365 615 5.6E-5 T 09-03-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 BV404_RS08635 83a00fe69170a3240a43bc670de6b2e8 777 SUPERFAMILY SSF102114 368 429 1.11E-11 T 09-03-2017 BV404_RS08635 83a00fe69170a3240a43bc670de6b2e8 777 SUPERFAMILY SSF102114 459 606 1.11E-11 T 09-03-2017 BV404_RS08635 83a00fe69170a3240a43bc670de6b2e8 777 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 22 634 1.2E-262 T 09-03-2017 IPR022946 Uncharacterised protein family UPF0313 BV404_RS08635 83a00fe69170a3240a43bc670de6b2e8 777 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 21 684 47.99 T 09-03-2017 IPR022946 Uncharacterised protein family UPF0313 BV404_RS08635 83a00fe69170a3240a43bc670de6b2e8 777 Pfam PF11842 Domain of unknown function (DUF3362) 583 728 2.4E-42 T 09-03-2017 IPR024560 Uncharacterised protein family UPF0313, C-terminal BV404_RS08635 83a00fe69170a3240a43bc670de6b2e8 777 Pfam PF04055 Radical SAM superfamily 369 574 6.8E-20 T 09-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 BV404_RS08195 a21162350c5b1224f96acc3b1e63d2ff 48 Pfam PF10013 Uncharacterized protein conserved in bacteria (DUF2256) 5 44 7.8E-22 T 09-03-2017 IPR017136 Uncharacterised conserved protein UCP037205 BV404_RS08195 a21162350c5b1224f96acc3b1e63d2ff 48 PIRSF PIRSF037205 1 48 7.4E-25 T 09-03-2017 IPR017136 Uncharacterised conserved protein UCP037205 BV404_RS04345 104ce40bb464cd1d1ebd62fd1dd5b26a 1023 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 4 968 2.3E-162 T 09-03-2017 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS04345 104ce40bb464cd1d1ebd62fd1dd5b26a 1023 Pfam PF14579 Helix-hairpin-helix motif 768 854 4.2E-16 T 09-03-2017 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS04345 104ce40bb464cd1d1ebd62fd1dd5b26a 1023 Pfam PF02811 PHP domain 8 99 1.6E-10 T 09-03-2017 IPR004013 PHP domain GO:0003824 BV404_RS04345 104ce40bb464cd1d1ebd62fd1dd5b26a 1023 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 270 694 1.5E-145 T 09-03-2017 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS04345 104ce40bb464cd1d1ebd62fd1dd5b26a 1023 Pfam PF01336 OB-fold nucleic acid binding domain 933 1000 3.6E-8 T 09-03-2017 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 BV404_RS04345 104ce40bb464cd1d1ebd62fd1dd5b26a 1023 SMART SM00481 4 73 3.2E-7 T 09-03-2017 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 BV404_RS04345 104ce40bb464cd1d1ebd62fd1dd5b26a 1023 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 3 1023 13.221 T 09-03-2017 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS07625 986ad4b1f531e71c67c6d06804503e0d 402 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 93 156 7.7E-17 T 09-03-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 BV404_RS07625 986ad4b1f531e71c67c6d06804503e0d 402 Gene3D G3DSA:1.10.3720.10 268 397 1.1E-44 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS07625 986ad4b1f531e71c67c6d06804503e0d 402 Gene3D G3DSA:1.10.3720.10 202 203 1.1E-44 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS07625 986ad4b1f531e71c67c6d06804503e0d 402 Gene3D G3DSA:1.10.3720.10 91 160 1.1E-44 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS07625 986ad4b1f531e71c67c6d06804503e0d 402 SUPERFAMILY SSF161098 92 160 5.23E-11 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS07625 986ad4b1f531e71c67c6d06804503e0d 402 SUPERFAMILY SSF161098 193 208 5.23E-11 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS07625 986ad4b1f531e71c67c6d06804503e0d 402 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 230 397 6.8E-13 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS07625 986ad4b1f531e71c67c6d06804503e0d 402 SUPERFAMILY SSF161098 194 383 1.31E-24 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS05205 a0352dd9d909cab5c110152eac0e735b 260 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 256 2.1E-16 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS05205 a0352dd9d909cab5c110152eac0e735b 260 Gene3D G3DSA:1.10.3720.10 60 258 2.8E-19 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS05205 a0352dd9d909cab5c110152eac0e735b 260 SUPERFAMILY SSF161098 64 252 2.75E-19 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS14295 1f6bf5081d10c257b216b0a280169a91 174 Gene3D G3DSA:3.40.50.360 105 173 6.2E-21 T 09-03-2017 IPR029039 Flavoprotein-like domain BV404_RS14295 1f6bf5081d10c257b216b0a280169a91 174 Gene3D G3DSA:3.40.50.360 2 71 6.2E-21 T 09-03-2017 IPR029039 Flavoprotein-like domain BV404_RS14295 1f6bf5081d10c257b216b0a280169a91 174 SUPERFAMILY SSF52218 2 157 3.18E-29 T 09-03-2017 IPR029039 Flavoprotein-like domain BV404_RS14295 1f6bf5081d10c257b216b0a280169a91 174 Pfam PF12724 Flavodoxin domain 4 152 7.9E-48 T 09-03-2017 IPR026816 Flavodoxin domain BV404_RS10160 672454711caf204dc99984593ba9e21a 416 SUPERFAMILY SSF53383 6 415 4.49E-185 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase BV404_RS10160 672454711caf204dc99984593ba9e21a 416 Gene3D G3DSA:3.40.640.10 37 284 6.6E-110 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 BV404_RS10160 672454711caf204dc99984593ba9e21a 416 Pfam PF00464 Serine hydroxymethyltransferase 8 385 9.8E-185 T 09-03-2017 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 BV404_RS10160 672454711caf204dc99984593ba9e21a 416 PIRSF PIRSF000412 1 415 5.2E-170 T 09-03-2017 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 BV404_RS10160 672454711caf204dc99984593ba9e21a 416 Gene3D G3DSA:3.90.1150.10 285 415 9.8E-56 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 BV404_RS10160 672454711caf204dc99984593ba9e21a 416 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 09-03-2017 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 BV404_RS10160 672454711caf204dc99984593ba9e21a 416 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 416 52.61 T 09-03-2017 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 BV404_RS06010 5b4defda6cf9c46fa2e2adb4aab075af 186 Pfam PF03352 Methyladenine glycosylase 10 185 1.8E-76 T 09-03-2017 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 BV404_RS06010 5b4defda6cf9c46fa2e2adb4aab075af 186 Gene3D G3DSA:1.10.340.30 7 184 7.6E-81 T 09-03-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 BV404_RS06010 5b4defda6cf9c46fa2e2adb4aab075af 186 SUPERFAMILY SSF48150 7 184 3.14E-76 T 09-03-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 BV404_RS10970 3f5fbb419df8a4e4025048ab886f0a0d 243 SUPERFAMILY SSF75217 4 162 5.62E-38 T 09-03-2017 IPR029028 Alpha/beta knot methyltransferases BV404_RS10970 3f5fbb419df8a4e4025048ab886f0a0d 243 Gene3D G3DSA:3.40.1280.10 3 157 4.8E-34 T 09-03-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BV404_RS10970 3f5fbb419df8a4e4025048ab886f0a0d 243 Pfam PF00588 SpoU rRNA Methylase family 5 154 5.8E-35 T 09-03-2017 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 BV404_RS10970 3f5fbb419df8a4e4025048ab886f0a0d 243 PIRSF PIRSF004808 1 243 7.8E-73 T 09-03-2017 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 BV404_RS10970 3f5fbb419df8a4e4025048ab886f0a0d 243 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 238 3.4E-85 T 09-03-2017 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 BV404_RS03520 759e1ff4be139d2fc07b18d068ecf602 301 SUPERFAMILY SSF54909 1 296 1.63E-94 T 09-03-2017 IPR011008 Dimeric alpha-beta barrel BV404_RS03520 759e1ff4be139d2fc07b18d068ecf602 301 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 293 3.7E-88 T 09-03-2017 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 BV404_RS03520 759e1ff4be139d2fc07b18d068ecf602 301 Pfam PF04261 Dyp-type peroxidase family 5 293 1.4E-92 T 09-03-2017 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 BV404_RS21830 7e2be95da0f107f7d64dd69e562532b7 190 Gene3D G3DSA:3.40.50.300 125 187 2.9E-20 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS21830 7e2be95da0f107f7d64dd69e562532b7 190 SMART SM00448 1 99 3.9E-13 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS21830 7e2be95da0f107f7d64dd69e562532b7 190 Pfam PF00072 Response regulator receiver domain 4 100 1.9E-19 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS21830 7e2be95da0f107f7d64dd69e562532b7 190 Gene3D G3DSA:3.40.50.2300 2 112 4.5E-25 T 09-03-2017 BV404_RS21830 7e2be95da0f107f7d64dd69e562532b7 190 SUPERFAMILY SSF52172 2 171 1.17E-33 T 09-03-2017 IPR011006 CheY-like superfamily BV404_RS21830 7e2be95da0f107f7d64dd69e562532b7 190 Pfam PF00158 Sigma-54 interaction domain 127 190 5.2E-16 T 09-03-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BV404_RS21830 7e2be95da0f107f7d64dd69e562532b7 190 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 151 164 - T 09-03-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BV404_RS00560 69d3f133da44c5fcb2a35ebf6e7df0fa 185 SUPERFAMILY SSF110997 110 181 5.62E-17 T 09-03-2017 IPR007730 Sporulation-related domain GO:0042834 BV404_RS00560 69d3f133da44c5fcb2a35ebf6e7df0fa 185 Gene3D G3DSA:3.30.70.1070 107 182 1.4E-25 T 09-03-2017 IPR007730 Sporulation-related domain GO:0042834 BV404_RS00560 69d3f133da44c5fcb2a35ebf6e7df0fa 185 Pfam PF05036 Sporulation related domain 111 180 2.3E-13 T 09-03-2017 IPR007730 Sporulation-related domain GO:0042834 BV404_RS04280 3a9b91abea7e8c39e18306b732fad234 209 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 198 4.2E-62 T 09-03-2017 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 BV404_RS04280 3a9b91abea7e8c39e18306b732fad234 209 ProSitePatterns PS01331 Thymidylate kinase signature. 95 107 - T 09-03-2017 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 BV404_RS04280 3a9b91abea7e8c39e18306b732fad234 209 Pfam PF02223 Thymidylate kinase 8 198 9.5E-58 T 09-03-2017 BV404_RS04280 3a9b91abea7e8c39e18306b732fad234 209 Gene3D G3DSA:3.40.50.300 3 207 5.4E-67 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS04280 3a9b91abea7e8c39e18306b732fad234 209 SUPERFAMILY SSF52540 1 207 2.13E-54 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS04280 3a9b91abea7e8c39e18306b732fad234 209 Hamap MF_00165 Thymidylate kinase [tmk]. 4 206 27.34 T 09-03-2017 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 BV404_RS10995 68755d3ffdde939dcc4847ea0015ce27 110 SMART SM01323 18 102 1.4E-38 T 09-03-2017 IPR003849 Preprotein translocase YajC BV404_RS10995 68755d3ffdde939dcc4847ea0015ce27 110 Pfam PF02699 Preprotein translocase subunit 22 99 1.2E-25 T 09-03-2017 IPR003849 Preprotein translocase YajC BV404_RS10995 68755d3ffdde939dcc4847ea0015ce27 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 20 40 9.7E-16 T 09-03-2017 IPR003849 Preprotein translocase YajC BV404_RS10995 68755d3ffdde939dcc4847ea0015ce27 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 58 76 9.7E-16 T 09-03-2017 IPR003849 Preprotein translocase YajC BV404_RS10995 68755d3ffdde939dcc4847ea0015ce27 110 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 20 102 7.3E-30 T 09-03-2017 IPR003849 Preprotein translocase YajC BV404_RS02410 29d183198bccdbe4bc1b2b7108b51cc1 271 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 257 1.9E-83 T 09-03-2017 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 BV404_RS02410 29d183198bccdbe4bc1b2b7108b51cc1 271 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 262 20.283 T 09-03-2017 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 BV404_RS02410 29d183198bccdbe4bc1b2b7108b51cc1 271 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 4 261 2.7E-92 T 09-03-2017 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 BV404_RS02410 29d183198bccdbe4bc1b2b7108b51cc1 271 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 09-03-2017 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 BV404_RS03155 af3aa0de4881475348aa2eb9038a5af1 141 Gene3D G3DSA:1.20.58.300 1 113 3.7E-23 T 09-03-2017 IPR007809 FlgN-like protein GO:0005515|GO:0044780 BV404_RS03155 af3aa0de4881475348aa2eb9038a5af1 141 SUPERFAMILY SSF140566 1 113 4.05E-22 T 09-03-2017 IPR007809 FlgN-like protein GO:0005515|GO:0044780 BV404_RS03155 af3aa0de4881475348aa2eb9038a5af1 141 Pfam PF05130 FlgN protein 2 131 9.0E-25 T 09-03-2017 IPR007809 FlgN-like protein GO:0005515|GO:0044780 BV404_RS10275 b8ef43e4c6f19cf2451988f44089e4b3 319 Pfam PF02653 Branched-chain amino acid transport system / permease component 45 311 7.3E-35 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 BV404_RS12080 55ebfc2dd764b6a47143af5ffceb37b6 529 SUPERFAMILY SSF81901 29 165 7.85E-14 T 09-03-2017 BV404_RS12080 55ebfc2dd764b6a47143af5ffceb37b6 529 Gene3D G3DSA:1.25.40.10 274 469 1.9E-57 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BV404_RS12080 55ebfc2dd764b6a47143af5ffceb37b6 529 Gene3D G3DSA:1.25.40.10 21 273 1.2E-43 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BV404_RS12080 55ebfc2dd764b6a47143af5ffceb37b6 529 SUPERFAMILY SSF81901 273 478 8.5E-45 T 09-03-2017 BV404_RS12080 55ebfc2dd764b6a47143af5ffceb37b6 529 SUPERFAMILY SSF81901 141 319 5.89E-34 T 09-03-2017 BV404_RS12080 55ebfc2dd764b6a47143af5ffceb37b6 529 Pfam PF08238 Sel1 repeat 313 346 2.5E-5 T 09-03-2017 IPR006597 Sel1-like repeat BV404_RS12080 55ebfc2dd764b6a47143af5ffceb37b6 529 Pfam PF08238 Sel1 repeat 276 310 2.2E-5 T 09-03-2017 IPR006597 Sel1-like repeat BV404_RS12080 55ebfc2dd764b6a47143af5ffceb37b6 529 Pfam PF08238 Sel1 repeat 70 79 120.0 T 09-03-2017 IPR006597 Sel1-like repeat BV404_RS12080 55ebfc2dd764b6a47143af5ffceb37b6 529 Pfam PF08238 Sel1 repeat 206 238 5.0E-6 T 09-03-2017 IPR006597 Sel1-like repeat BV404_RS12080 55ebfc2dd764b6a47143af5ffceb37b6 529 Pfam PF08238 Sel1 repeat 383 418 8.5E-12 T 09-03-2017 IPR006597 Sel1-like repeat BV404_RS12080 55ebfc2dd764b6a47143af5ffceb37b6 529 Pfam PF08238 Sel1 repeat 172 203 5.7E-6 T 09-03-2017 IPR006597 Sel1-like repeat BV404_RS12080 55ebfc2dd764b6a47143af5ffceb37b6 529 Pfam PF08238 Sel1 repeat 244 272 5.6E-4 T 09-03-2017 IPR006597 Sel1-like repeat BV404_RS12080 55ebfc2dd764b6a47143af5ffceb37b6 529 Pfam PF08238 Sel1 repeat 421 453 1.4E-4 T 09-03-2017 IPR006597 Sel1-like repeat BV404_RS12080 55ebfc2dd764b6a47143af5ffceb37b6 529 Pfam PF08238 Sel1 repeat 348 382 2.4E-10 T 09-03-2017 IPR006597 Sel1-like repeat BV404_RS12080 55ebfc2dd764b6a47143af5ffceb37b6 529 SMART SM00671 168 203 3.6E-6 T 09-03-2017 IPR006597 Sel1-like repeat BV404_RS12080 55ebfc2dd764b6a47143af5ffceb37b6 529 SMART SM00671 419 454 1.1E-5 T 09-03-2017 IPR006597 Sel1-like repeat BV404_RS12080 55ebfc2dd764b6a47143af5ffceb37b6 529 SMART SM00671 81 112 44.0 T 09-03-2017 IPR006597 Sel1-like repeat BV404_RS12080 55ebfc2dd764b6a47143af5ffceb37b6 529 SMART SM00671 275 310 1.2E-5 T 09-03-2017 IPR006597 Sel1-like repeat BV404_RS12080 55ebfc2dd764b6a47143af5ffceb37b6 529 SMART SM00671 347 382 8.4E-12 T 09-03-2017 IPR006597 Sel1-like repeat BV404_RS12080 55ebfc2dd764b6a47143af5ffceb37b6 529 SMART SM00671 311 346 1.4E-6 T 09-03-2017 IPR006597 Sel1-like repeat BV404_RS12080 55ebfc2dd764b6a47143af5ffceb37b6 529 SMART SM00671 204 239 7.8E-6 T 09-03-2017 IPR006597 Sel1-like repeat BV404_RS12080 55ebfc2dd764b6a47143af5ffceb37b6 529 SMART SM00671 240 274 2.4E-4 T 09-03-2017 IPR006597 Sel1-like repeat BV404_RS12080 55ebfc2dd764b6a47143af5ffceb37b6 529 SMART SM00671 383 418 2.2E-13 T 09-03-2017 IPR006597 Sel1-like repeat BV404_RS08085 c0a7dfc548039dbe9f6a83a355f683d1 311 Gene3D G3DSA:1.10.10.10 3 80 7.1E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS08085 c0a7dfc548039dbe9f6a83a355f683d1 311 SUPERFAMILY SSF53850 90 288 5.25E-31 T 09-03-2017 BV404_RS08085 c0a7dfc548039dbe9f6a83a355f683d1 311 Gene3D G3DSA:3.40.190.10 88 166 8.0E-17 T 09-03-2017 BV404_RS08085 c0a7dfc548039dbe9f6a83a355f683d1 311 Gene3D G3DSA:3.40.190.10 267 293 8.0E-17 T 09-03-2017 BV404_RS08085 c0a7dfc548039dbe9f6a83a355f683d1 311 SUPERFAMILY SSF46785 3 79 1.21E-15 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS08085 c0a7dfc548039dbe9f6a83a355f683d1 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.9E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS08085 c0a7dfc548039dbe9f6a83a355f683d1 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.9E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS08085 c0a7dfc548039dbe9f6a83a355f683d1 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.9E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS08085 c0a7dfc548039dbe9f6a83a355f683d1 311 Pfam PF03466 LysR substrate binding domain 92 292 2.2E-15 T 09-03-2017 IPR005119 LysR, substrate-binding BV404_RS08085 c0a7dfc548039dbe9f6a83a355f683d1 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 8.9E-15 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS08085 c0a7dfc548039dbe9f6a83a355f683d1 311 Gene3D G3DSA:3.40.190.10 167 262 1.9E-19 T 09-03-2017 BV404_RS00630 c9465acfe059ae87d320773263e9cbd3 482 Gene3D G3DSA:3.40.50.300 245 466 1.9E-33 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS00630 c9465acfe059ae87d320773263e9cbd3 482 Gene3D G3DSA:3.40.50.300 39 228 3.4E-25 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS00630 c9465acfe059ae87d320773263e9cbd3 482 SMART SM00382 277 467 8.0E-6 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS00630 c9465acfe059ae87d320773263e9cbd3 482 SMART SM00382 24 210 10.0 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS00630 c9465acfe059ae87d320773263e9cbd3 482 Pfam PF00005 ABC transporter 39 157 1.4E-10 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS00630 c9465acfe059ae87d320773263e9cbd3 482 Pfam PF00005 ABC transporter 269 420 1.6E-20 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS00630 c9465acfe059ae87d320773263e9cbd3 482 SUPERFAMILY SSF52540 245 466 9.78E-36 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS00630 c9465acfe059ae87d320773263e9cbd3 482 SUPERFAMILY SSF52540 39 226 6.22E-25 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS08570 7b5246f9ebd13f6d372f7acceaef480e 201 Pfam PF13417 Glutathione S-transferase, N-terminal domain 5 79 1.6E-15 T 09-03-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 BV404_RS08570 7b5246f9ebd13f6d372f7acceaef480e 201 SUPERFAMILY SSF47616 79 167 1.18E-11 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like BV404_RS08570 7b5246f9ebd13f6d372f7acceaef480e 201 Gene3D G3DSA:3.40.30.10 3 93 1.6E-23 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS08570 7b5246f9ebd13f6d372f7acceaef480e 201 Gene3D G3DSA:1.20.1050.10 94 168 3.8E-15 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like BV404_RS08570 7b5246f9ebd13f6d372f7acceaef480e 201 SUPERFAMILY SSF52833 1 102 7.06E-20 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS03545 8443d610589bb2f150b4226f0a5aa708 667 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 431 656 4.1E-53 T 09-03-2017 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 BV404_RS03545 8443d610589bb2f150b4226f0a5aa708 667 Pfam PF07196 Flagellin hook IN motif 125 178 2.7E-7 T 09-03-2017 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 BV404_RS03545 8443d610589bb2f150b4226f0a5aa708 667 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 10 107 3.9E-21 T 09-03-2017 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 BV404_RS00515 7095e677837ba38a822d224d48e51d96 80 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 18.119 T 09-03-2017 IPR009252 Cell division protein ZapB GO:0000917|GO:0005737|GO:0043093 BV404_RS00515 7095e677837ba38a822d224d48e51d96 80 Pfam PF06005 Protein of unknown function (DUF904) 1 77 3.8E-26 T 09-03-2017 IPR009252 Cell division protein ZapB GO:0000917|GO:0005737|GO:0043093 BV404_RS03400 940c95465b5150cd22e3ec1550ccfe21 416 Pfam PF00860 Permease family 3 371 4.6E-93 T 09-03-2017 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 BV404_RS03400 940c95465b5150cd22e3ec1550ccfe21 416 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 3 395 2.8E-111 T 09-03-2017 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 BV404_RS03400 940c95465b5150cd22e3ec1550ccfe21 416 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 319 339 - T 09-03-2017 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 BV404_RS10545 edf33b833608f9b9a23030b17f60831c 363 Pfam PF01728 FtsJ-like methyltransferase 188 259 5.0E-6 T 09-03-2017 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 BV404_RS10545 edf33b833608f9b9a23030b17f60831c 363 PIRSF PIRSF028774 1 362 5.9E-190 T 09-03-2017 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 BV404_RS10545 edf33b833608f9b9a23030b17f60831c 363 Gene3D G3DSA:3.40.50.150 186 283 7.3E-13 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS10545 edf33b833608f9b9a23030b17f60831c 363 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 357 84.982 T 09-03-2017 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 BV404_RS10545 edf33b833608f9b9a23030b17f60831c 363 SUPERFAMILY SSF53335 186 281 4.95E-12 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS08080 b24037cfd909ad085188a66aeed15677 160 Gene3D G3DSA:3.40.630.30 2 160 1.9E-33 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS08080 b24037cfd909ad085188a66aeed15677 160 Pfam PF00583 Acetyltransferase (GNAT) family 60 138 1.6E-12 T 09-03-2017 IPR000182 GNAT domain GO:0008080 BV404_RS08080 b24037cfd909ad085188a66aeed15677 160 SUPERFAMILY SSF55729 1 159 1.05E-26 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS13390 b106e99e1ab0282b407614410989d6d9 624 SUPERFAMILY SSF51735 282 578 7.52E-51 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS13390 b106e99e1ab0282b407614410989d6d9 624 Gene3D G3DSA:3.90.25.10 469 554 2.2E-7 T 09-03-2017 BV404_RS13390 b106e99e1ab0282b407614410989d6d9 624 SUPERFAMILY SSF53335 111 331 3.16E-14 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS13390 b106e99e1ab0282b407614410989d6d9 624 Gene3D G3DSA:3.40.50.720 142 227 2.0E-8 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS13390 b106e99e1ab0282b407614410989d6d9 624 Gene3D G3DSA:3.40.50.720 283 468 1.7E-41 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS13390 b106e99e1ab0282b407614410989d6d9 624 Pfam PF02719 Polysaccharide biosynthesis protein 284 578 2.7E-127 T 09-03-2017 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain BV404_RS14785 ae3411582724225ee2ff36b48b482e2d 88 Pfam PF06611 Protein of unknown function (DUF1145) 4 59 4.7E-18 T 09-03-2017 IPR009525 Protein of unknown function DUF1145 BV404_RS07015 8add63968eba437ff1f6fd22a2801ba0 299 Gene3D G3DSA:2.30.30.60 147 192 1.9E-14 T 09-03-2017 BV404_RS07015 8add63968eba437ff1f6fd22a2801ba0 299 Gene3D G3DSA:3.30.70.100 204 289 2.2E-4 T 09-03-2017 BV404_RS07015 8add63968eba437ff1f6fd22a2801ba0 299 Pfam PF00924 Mechanosensitive ion channel 93 290 5.6E-35 T 09-03-2017 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 BV404_RS07015 8add63968eba437ff1f6fd22a2801ba0 299 SUPERFAMILY SSF50182 132 193 3.92E-14 T 09-03-2017 IPR010920 LSM domain BV404_RS07015 8add63968eba437ff1f6fd22a2801ba0 299 SUPERFAMILY SSF82689 204 292 1.57E-6 T 09-03-2017 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 BV404_RS07320 c8699bf258f05a143f81f79142e610f0 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 09-03-2017 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 BV404_RS07320 c8699bf258f05a143f81f79142e610f0 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 51.693 T 09-03-2017 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 BV404_RS07320 c8699bf258f05a143f81f79142e610f0 336 Gene3D G3DSA:3.20.20.70 1 336 2.7E-129 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS07320 c8699bf258f05a143f81f79142e610f0 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 336 9.4E-93 T 09-03-2017 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 BV404_RS07320 c8699bf258f05a143f81f79142e610f0 336 PIRSF PIRSF000164 10 336 1.9E-103 T 09-03-2017 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 BV404_RS07320 c8699bf258f05a143f81f79142e610f0 336 SUPERFAMILY SSF51395 1 336 1.1E-107 T 09-03-2017 BV404_RS07320 c8699bf258f05a143f81f79142e610f0 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 5.0E-150 T 09-03-2017 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 BV404_RS07320 c8699bf258f05a143f81f79142e610f0 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 09-03-2017 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 BV404_RS05855 073641f9860e2d239978c97c50e1849f 277 Gene3D G3DSA:3.20.20.410 1 262 1.5E-71 T 09-03-2017 IPR002763 Protein of unknown function DUF72 BV404_RS05855 073641f9860e2d239978c97c50e1849f 277 SUPERFAMILY SSF117396 1 254 3.14E-70 T 09-03-2017 IPR002763 Protein of unknown function DUF72 BV404_RS05855 073641f9860e2d239978c97c50e1849f 277 Pfam PF01904 Protein of unknown function DUF72 12 250 1.2E-55 T 09-03-2017 IPR002763 Protein of unknown function DUF72 BV404_RS12430 f8d3712138ad447c3f16d7a03e0e5e77 126 Pfam PF04379 Protein of unknown function (DUF525) 18 103 5.4E-33 T 09-03-2017 IPR007474 ApaG domain BV404_RS12430 f8d3712138ad447c3f16d7a03e0e5e77 126 Hamap MF_00791 Protein ApaG [apaG]. 1 126 31.433 T 09-03-2017 IPR023065 Uncharacterised protein family ApaG BV404_RS12430 f8d3712138ad447c3f16d7a03e0e5e77 126 SUPERFAMILY SSF110069 6 126 5.76E-47 T 09-03-2017 IPR007474 ApaG domain BV404_RS12430 f8d3712138ad447c3f16d7a03e0e5e77 126 Gene3D G3DSA:2.60.40.1470 7 125 6.5E-46 T 09-03-2017 IPR007474 ApaG domain BV404_RS01535 68ef6dd503a7791a7667e02dc0f01db5 320 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 175 270 9.4E-25 T 09-03-2017 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 BV404_RS01535 68ef6dd503a7791a7667e02dc0f01db5 320 PRINTS PR00682 Isopenicillin N synthase signature 229 255 4.3E-14 T 09-03-2017 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 BV404_RS01535 68ef6dd503a7791a7667e02dc0f01db5 320 PRINTS PR00682 Isopenicillin N synthase signature 26 43 4.3E-14 T 09-03-2017 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 BV404_RS01535 68ef6dd503a7791a7667e02dc0f01db5 320 PRINTS PR00682 Isopenicillin N synthase signature 193 214 4.3E-14 T 09-03-2017 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 BV404_RS01535 68ef6dd503a7791a7667e02dc0f01db5 320 SUPERFAMILY SSF51197 1 311 5.97E-92 T 09-03-2017 BV404_RS01535 68ef6dd503a7791a7667e02dc0f01db5 320 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 3 127 4.9E-31 T 09-03-2017 IPR026992 Non-haem dioxygenase N-terminal domain BV404_RS01535 68ef6dd503a7791a7667e02dc0f01db5 320 Gene3D G3DSA:2.60.120.330 1 312 6.5E-99 T 09-03-2017 IPR027443 Isopenicillin N synthase-like BV404_RS03175 e3af04f362b3b4fb61a187f43d6d4821 275 Pfam PF01739 CheR methyltransferase, SAM binding domain 76 269 1.4E-67 T 09-03-2017 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal BV404_RS03175 e3af04f362b3b4fb61a187f43d6d4821 275 SUPERFAMILY SSF53335 76 269 2.37E-49 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS03175 e3af04f362b3b4fb61a187f43d6d4821 275 PRINTS PR00996 Glutamate methyltransferase family signature 106 126 7.7E-43 T 09-03-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BV404_RS03175 e3af04f362b3b4fb61a187f43d6d4821 275 PRINTS PR00996 Glutamate methyltransferase family signature 212 226 7.7E-43 T 09-03-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BV404_RS03175 e3af04f362b3b4fb61a187f43d6d4821 275 PRINTS PR00996 Glutamate methyltransferase family signature 30 43 7.7E-43 T 09-03-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BV404_RS03175 e3af04f362b3b4fb61a187f43d6d4821 275 PRINTS PR00996 Glutamate methyltransferase family signature 143 159 7.7E-43 T 09-03-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BV404_RS03175 e3af04f362b3b4fb61a187f43d6d4821 275 PRINTS PR00996 Glutamate methyltransferase family signature 231 254 7.7E-43 T 09-03-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BV404_RS03175 e3af04f362b3b4fb61a187f43d6d4821 275 PRINTS PR00996 Glutamate methyltransferase family signature 69 81 7.7E-43 T 09-03-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BV404_RS03175 e3af04f362b3b4fb61a187f43d6d4821 275 Gene3D G3DSA:1.10.155.10 3 74 7.7E-16 T 09-03-2017 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal BV404_RS03175 e3af04f362b3b4fb61a187f43d6d4821 275 Gene3D G3DSA:3.40.50.150 75 270 2.6E-63 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS03175 e3af04f362b3b4fb61a187f43d6d4821 275 SUPERFAMILY SSF47757 3 75 2.75E-15 T 09-03-2017 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal BV404_RS03175 e3af04f362b3b4fb61a187f43d6d4821 275 SMART SM00138 8 272 2.5E-130 T 09-03-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BV404_RS03175 e3af04f362b3b4fb61a187f43d6d4821 275 Pfam PF03705 CheR methyltransferase, all-alpha domain 9 57 1.2E-10 T 09-03-2017 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal BV404_RS03200 096093a7bd79f4a13d62a806bc0496fc 249 Pfam PF00460 Flagella basal body rod protein 8 35 2.0E-5 T 09-03-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BV404_RS03200 096093a7bd79f4a13d62a806bc0496fc 249 SUPERFAMILY SSF117143 77 207 4.58E-17 T 09-03-2017 BV404_RS03200 096093a7bd79f4a13d62a806bc0496fc 249 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 6 226 5.9E-55 T 09-03-2017 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 BV404_RS03200 096093a7bd79f4a13d62a806bc0496fc 249 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 173 242 2.7E-22 T 09-03-2017 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BV404_RS03200 096093a7bd79f4a13d62a806bc0496fc 249 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 9.8E-34 T 09-03-2017 IPR020013 Fagellar hook-basal body protein, FlgE/F/G BV404_RS11180 e6015ce4ea3419fc04a8715127737c34 717 Pfam PF13604 AAA domain 249 410 1.3E-30 T 09-03-2017 BV404_RS11180 e6015ce4ea3419fc04a8715127737c34 717 Gene3D G3DSA:3.40.50.300 236 413 1.9E-50 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11180 e6015ce4ea3419fc04a8715127737c34 717 Gene3D G3DSA:3.40.50.300 446 474 1.9E-50 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11180 e6015ce4ea3419fc04a8715127737c34 717 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 15 710 5.6E-215 T 09-03-2017 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 BV404_RS11180 e6015ce4ea3419fc04a8715127737c34 717 SUPERFAMILY SSF52540 443 474 3.19E-59 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11180 e6015ce4ea3419fc04a8715127737c34 717 SUPERFAMILY SSF52540 537 711 3.19E-59 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11180 e6015ce4ea3419fc04a8715127737c34 717 SUPERFAMILY SSF52540 376 416 3.19E-59 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11180 e6015ce4ea3419fc04a8715127737c34 717 Pfam PF13538 UvrD-like helicase C-terminal domain 639 685 3.4E-15 T 09-03-2017 IPR027785 UvrD-like helicase C-terminal domain BV404_RS11180 e6015ce4ea3419fc04a8715127737c34 717 SUPERFAMILY SSF52540 239 456 1.87E-44 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11180 e6015ce4ea3419fc04a8715127737c34 717 SUPERFAMILY SSF52540 17 169 1.87E-44 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11180 e6015ce4ea3419fc04a8715127737c34 717 Gene3D G3DSA:3.40.50.300 631 688 4.5E-12 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11180 e6015ce4ea3419fc04a8715127737c34 717 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 24 708 50.108 T 09-03-2017 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 BV404_RS08535 f73339cc20ec1627bcf9a44becda1b03 66 Pfam PF14056 Domain of unknown function (DUF4250) 10 61 5.8E-19 T 09-03-2017 IPR025346 Protein of unknown function DUF4250 BV404_RS12920 e07fe69086e57dcfe4350101208747f2 327 Pfam PF01145 SPFH domain / Band 7 family 22 233 1.5E-28 T 09-03-2017 IPR001107 Band 7 domain BV404_RS12920 e07fe69086e57dcfe4350101208747f2 327 SUPERFAMILY SSF117892 56 142 1.7E-22 T 09-03-2017 IPR001107 Band 7 domain BV404_RS12920 e07fe69086e57dcfe4350101208747f2 327 SUPERFAMILY SSF117892 173 223 1.7E-22 T 09-03-2017 IPR001107 Band 7 domain BV404_RS12920 e07fe69086e57dcfe4350101208747f2 327 SMART SM00244 18 218 6.8E-47 T 09-03-2017 IPR001107 Band 7 domain BV404_RS12920 e07fe69086e57dcfe4350101208747f2 327 PIRSF PIRSF005651 1 327 4.2E-96 T 09-03-2017 IPR010200 HflC GO:0016021|GO:0052547 BV404_RS12920 e07fe69086e57dcfe4350101208747f2 327 TIGRFAM TIGR01932 hflC: HflC protein 1 318 3.7E-138 T 09-03-2017 IPR010200 HflC GO:0016021|GO:0052547 BV404_RS10370 5f9677d642ba3581612f6a06b392d071 293 Gene3D G3DSA:3.90.550.10 3 276 9.4E-68 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases BV404_RS10370 5f9677d642ba3581612f6a06b392d071 293 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 263 3.5E-121 T 09-03-2017 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 BV404_RS10370 5f9677d642ba3581612f6a06b392d071 293 SUPERFAMILY SSF53448 4 273 2.21E-64 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases BV404_RS10370 5f9677d642ba3581612f6a06b392d071 293 Pfam PF00483 Nucleotidyl transferase 9 265 1.0E-30 T 09-03-2017 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 BV404_RS03905 3006ebe228b006f55942bb9f48cda19f 244 PRINTS PR00046 Major sigma-70 factor signature 46 59 2.7E-12 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS03905 3006ebe228b006f55942bb9f48cda19f 244 PRINTS PR00046 Major sigma-70 factor signature 222 233 2.7E-12 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS03905 3006ebe228b006f55942bb9f48cda19f 244 PRINTS PR00046 Major sigma-70 factor signature 190 202 2.7E-12 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS03905 3006ebe228b006f55942bb9f48cda19f 244 PRINTS PR00046 Major sigma-70 factor signature 207 222 2.7E-12 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS03905 3006ebe228b006f55942bb9f48cda19f 244 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 7 240 62.748 T 09-03-2017 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 BV404_RS03905 3006ebe228b006f55942bb9f48cda19f 244 Gene3D G3DSA:1.10.601.10 19 86 3.0E-14 T 09-03-2017 BV404_RS03905 3006ebe228b006f55942bb9f48cda19f 244 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 20 238 8.2E-85 T 09-03-2017 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 BV404_RS03905 3006ebe228b006f55942bb9f48cda19f 244 Gene3D G3DSA:1.10.10.10 175 238 6.9E-15 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS03905 3006ebe228b006f55942bb9f48cda19f 244 Pfam PF04539 Sigma-70 region 3 100 171 3.2E-13 T 09-03-2017 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS03905 3006ebe228b006f55942bb9f48cda19f 244 SUPERFAMILY SSF88659 162 240 2.8E-21 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS03905 3006ebe228b006f55942bb9f48cda19f 244 SUPERFAMILY SSF88946 6 91 2.09E-22 T 09-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS03905 3006ebe228b006f55942bb9f48cda19f 244 Gene3D G3DSA:1.10.10.10 91 138 9.4E-10 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS03905 3006ebe228b006f55942bb9f48cda19f 244 Pfam PF04545 Sigma-70, region 4 187 234 2.8E-19 T 09-03-2017 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS03905 3006ebe228b006f55942bb9f48cda19f 244 PIRSF PIRSF000770 3 243 8.4E-34 T 09-03-2017 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 BV404_RS03905 3006ebe228b006f55942bb9f48cda19f 244 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 237 1.1E-31 T 09-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS03905 3006ebe228b006f55942bb9f48cda19f 244 Pfam PF04542 Sigma-70 region 2 20 91 4.0E-15 T 09-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS03905 3006ebe228b006f55942bb9f48cda19f 244 SUPERFAMILY SSF88659 92 164 2.96E-15 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BV404_RS04000 c389456814c8f01e57e33954da55bdbe 222 Gene3D G3DSA:3.40.50.720 3 191 1.4E-24 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS04000 c389456814c8f01e57e33954da55bdbe 222 Pfam PF00106 short chain dehydrogenase 8 185 5.4E-18 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR BV404_RS04000 c389456814c8f01e57e33954da55bdbe 222 SUPERFAMILY SSF51735 3 204 2.02E-25 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS05015 c1167ec30911a73742903539dbf6fec5 350 Gene3D G3DSA:1.10.760.10 46 160 4.9E-34 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 BV404_RS05015 c1167ec30911a73742903539dbf6fec5 350 SUPERFAMILY SSF46626 208 312 1.69E-18 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 BV404_RS05015 c1167ec30911a73742903539dbf6fec5 350 Gene3D G3DSA:1.10.760.10 213 306 7.1E-15 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 BV404_RS05015 c1167ec30911a73742903539dbf6fec5 350 SUPERFAMILY SSF46626 52 164 1.38E-26 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 BV404_RS05015 c1167ec30911a73742903539dbf6fec5 350 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 222 301 2.1E-9 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 BV404_RS03825 c6b12324440d0a3a58690952588f8b33 262 Pfam PF00005 ABC transporter 20 148 6.6E-30 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS03825 c6b12324440d0a3a58690952588f8b33 262 Gene3D G3DSA:3.40.50.300 2 216 6.1E-55 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS03825 c6b12324440d0a3a58690952588f8b33 262 SMART SM00382 29 199 2.6E-9 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS03825 c6b12324440d0a3a58690952588f8b33 262 SUPERFAMILY SSF52540 2 229 1.33E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS04120 3f040bb738fff1ddcabd4d11883f6a38 613 SUPERFAMILY SSF51658 1 269 1.16E-67 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain BV404_RS04120 3f040bb738fff1ddcabd4d11883f6a38 613 SUPERFAMILY SSF54593 278 605 1.23E-54 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BV404_RS04120 3f040bb738fff1ddcabd4d11883f6a38 613 Gene3D G3DSA:3.20.20.150 1 263 2.2E-68 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain BV404_RS04120 3f040bb738fff1ddcabd4d11883f6a38 613 Gene3D G3DSA:3.10.180.10 276 417 1.1E-31 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BV404_RS04120 3f040bb738fff1ddcabd4d11883f6a38 613 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 279 411 6.9E-33 T 09-03-2017 BV404_RS04120 3f040bb738fff1ddcabd4d11883f6a38 613 Gene3D G3DSA:3.10.180.10 425 611 1.2E-41 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BV404_RS04120 3f040bb738fff1ddcabd4d11883f6a38 613 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 430 573 2.0E-6 T 09-03-2017 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BV404_RS04120 3f040bb738fff1ddcabd4d11883f6a38 613 Pfam PF01261 Xylose isomerase-like TIM barrel 18 218 3.1E-32 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain BV404_RS06920 282b3b05ce471c83fa5851338a714ec7 331 Pfam PF11279 Protein of unknown function (DUF3080) 27 327 2.9E-87 T 09-03-2017 IPR021431 Protein of unknown function DUF3080 BV404_RS05150 8203592a3071d9e623fcd17ffa168627 92 ProSitePatterns PS00012 Phosphopantetheine attachment site. 31 46 - T 09-03-2017 IPR006162 Phosphopantetheine attachment site BV404_RS05150 8203592a3071d9e623fcd17ffa168627 92 Gene3D G3DSA:1.10.1200.10 6 76 1.6E-6 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain BV404_RS05150 8203592a3071d9e623fcd17ffa168627 92 SUPERFAMILY SSF47336 5 79 1.2E-9 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain BV404_RS05150 8203592a3071d9e623fcd17ffa168627 92 Pfam PF00550 Phosphopantetheine attachment site 8 53 6.0E-6 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain BV404_RS01075 ef9a558bbdb44b429f5b0c094385f681 206 Gene3D G3DSA:1.10.287.460 3 92 8.3E-24 T 09-03-2017 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 BV404_RS01075 ef9a558bbdb44b429f5b0c094385f681 206 Gene3D G3DSA:3.10.50.40 93 205 4.8E-43 T 09-03-2017 BV404_RS01075 ef9a558bbdb44b429f5b0c094385f681 206 SUPERFAMILY SSF54534 7 205 2.16E-54 T 09-03-2017 BV404_RS01075 ef9a558bbdb44b429f5b0c094385f681 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 2 108 6.2E-24 T 09-03-2017 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 BV404_RS01075 ef9a558bbdb44b429f5b0c094385f681 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 117 203 1.3E-25 T 09-03-2017 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 BV404_RS11380 bd450f07c8f27237d058c5316eb669ce 326 SUPERFAMILY SSF56784 103 310 8.81E-47 T 09-03-2017 IPR023214 HAD-like domain BV404_RS11380 bd450f07c8f27237d058c5316eb669ce 326 Pfam PF00702 haloacid dehalogenase-like hydrolase 107 279 2.7E-14 T 09-03-2017 BV404_RS11380 bd450f07c8f27237d058c5316eb669ce 326 Gene3D G3DSA:1.10.150.210 117 168 2.8E-27 T 09-03-2017 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 BV404_RS11380 bd450f07c8f27237d058c5316eb669ce 326 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 107 277 4.8E-26 T 09-03-2017 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 BV404_RS11380 bd450f07c8f27237d058c5316eb669ce 326 Gene3D G3DSA:3.40.50.1000 169 297 2.2E-35 T 09-03-2017 IPR023214 HAD-like domain BV404_RS11380 bd450f07c8f27237d058c5316eb669ce 326 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 102 310 8.1E-83 T 09-03-2017 BV404_RS06515 2c0e2fd8b015f310c005bf8c93bf5504 205 SUPERFAMILY SSF56925 49 174 1.53E-8 T 09-03-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 BV404_RS06515 2c0e2fd8b015f310c005bf8c93bf5504 205 Gene3D G3DSA:2.40.160.20 36 172 2.5E-6 T 09-03-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 BV404_RS10210 25e7ed61836682c41d047da0d1bf990e 220 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 09-03-2017 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 BV404_RS10210 25e7ed61836682c41d047da0d1bf990e 220 Pfam PF00923 Transaldolase 3 204 2.1E-38 T 09-03-2017 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 BV404_RS10210 25e7ed61836682c41d047da0d1bf990e 220 Gene3D G3DSA:3.20.20.70 1 215 8.0E-55 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS10210 25e7ed61836682c41d047da0d1bf990e 220 SUPERFAMILY SSF51569 1 218 7.64E-59 T 09-03-2017 BV404_RS02495 29b858c888723e20bfc612d29a0a9a96 329 SUPERFAMILY SSF51445 2 279 1.05E-85 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily BV404_RS02495 29b858c888723e20bfc612d29a0a9a96 329 Gene3D G3DSA:3.20.20.300 3 280 1.6E-90 T 09-03-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BV404_RS02495 29b858c888723e20bfc612d29a0a9a96 329 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 228 245 - T 09-03-2017 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 BV404_RS02495 29b858c888723e20bfc612d29a0a9a96 329 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 13 284 3.3E-83 T 09-03-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BV404_RS02495 29b858c888723e20bfc612d29a0a9a96 329 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 3 326 45.54 T 09-03-2017 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 BV404_RS09105 aa1864f7a5a4783e6303022cc39935bf 964 Pfam PF09397 Ftsk gamma domain 898 958 3.9E-26 T 09-03-2017 IPR018541 FtsK gamma domain BV404_RS09105 aa1864f7a5a4783e6303022cc39935bf 964 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 28 199 1.4E-41 T 09-03-2017 IPR025199 DNA translocase FtsK, 4TM region BV404_RS09105 aa1864f7a5a4783e6303022cc39935bf 964 SUPERFAMILY SSF46785 896 959 3.47E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS09105 aa1864f7a5a4783e6303022cc39935bf 964 SUPERFAMILY SSF52540 553 865 1.19E-48 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09105 aa1864f7a5a4783e6303022cc39935bf 964 SMART SM00843 896 961 6.0E-39 T 09-03-2017 IPR018541 FtsK gamma domain BV404_RS09105 aa1864f7a5a4783e6303022cc39935bf 964 Gene3D G3DSA:3.40.50.300 553 859 5.7E-92 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09105 aa1864f7a5a4783e6303022cc39935bf 964 Pfam PF01580 FtsK/SpoIIIE family 579 792 2.1E-70 T 09-03-2017 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 BV404_RS02540 69d2a558311e916734b73fbbee231378 175 SUPERFAMILY SSF52972 1 171 3.49E-62 T 09-03-2017 IPR029001 Inosine triphosphate pyrophosphatase-like BV404_RS02540 69d2a558311e916734b73fbbee231378 175 Gene3D G3DSA:3.90.950.10 2 170 3.5E-64 T 09-03-2017 IPR029001 Inosine triphosphate pyrophosphatase-like BV404_RS02540 69d2a558311e916734b73fbbee231378 175 Hamap MF_00648 Non-canonical purine NTP phosphatase. 2 171 31.059 T 09-03-2017 IPR002786 Non-canonical purine NTP phosphatase BV404_RS02540 69d2a558311e916734b73fbbee231378 175 Pfam PF01931 Protein of unknown function DUF84 7 165 4.8E-57 T 09-03-2017 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 BV404_RS02540 69d2a558311e916734b73fbbee231378 175 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 6 170 4.9E-47 T 09-03-2017 IPR002786 Non-canonical purine NTP phosphatase BV404_RS09935 56a2dcf45c84a3010d9da78d987960c0 635 Hamap MF_00505 Chaperone protein HtpG [htpG]. 7 632 32.498 T 09-03-2017 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 BV404_RS09935 56a2dcf45c84a3010d9da78d987960c0 635 SMART SM00387 32 189 1.2E-8 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS09935 56a2dcf45c84a3010d9da78d987960c0 635 SUPERFAMILY SSF55874 10 217 7.73E-65 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS09935 56a2dcf45c84a3010d9da78d987960c0 635 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 30 39 - T 09-03-2017 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 BV404_RS09935 56a2dcf45c84a3010d9da78d987960c0 635 Gene3D G3DSA:3.30.565.10 10 245 5.5E-82 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS09935 56a2dcf45c84a3010d9da78d987960c0 635 SUPERFAMILY SSF54211 238 493 3.03E-100 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold BV404_RS09935 56a2dcf45c84a3010d9da78d987960c0 635 PRINTS PR00775 90kDa heat shock protein signature 195 213 3.1E-62 T 09-03-2017 IPR020575 Heat shock protein Hsp90, N-terminal BV404_RS09935 56a2dcf45c84a3010d9da78d987960c0 635 PRINTS PR00775 90kDa heat shock protein signature 80 97 3.1E-62 T 09-03-2017 IPR020575 Heat shock protein Hsp90, N-terminal BV404_RS09935 56a2dcf45c84a3010d9da78d987960c0 635 PRINTS PR00775 90kDa heat shock protein signature 125 147 3.1E-62 T 09-03-2017 IPR020575 Heat shock protein Hsp90, N-terminal BV404_RS09935 56a2dcf45c84a3010d9da78d987960c0 635 PRINTS PR00775 90kDa heat shock protein signature 31 53 3.1E-62 T 09-03-2017 IPR020575 Heat shock protein Hsp90, N-terminal BV404_RS09935 56a2dcf45c84a3010d9da78d987960c0 635 PRINTS PR00775 90kDa heat shock protein signature 98 115 3.1E-62 T 09-03-2017 IPR020575 Heat shock protein Hsp90, N-terminal BV404_RS09935 56a2dcf45c84a3010d9da78d987960c0 635 PRINTS PR00775 90kDa heat shock protein signature 177 194 3.1E-62 T 09-03-2017 IPR020575 Heat shock protein Hsp90, N-terminal BV404_RS09935 56a2dcf45c84a3010d9da78d987960c0 635 PRINTS PR00775 90kDa heat shock protein signature 10 30 3.1E-62 T 09-03-2017 IPR020575 Heat shock protein Hsp90, N-terminal BV404_RS09935 56a2dcf45c84a3010d9da78d987960c0 635 SUPERFAMILY SSF110942 520 632 1.11E-33 T 09-03-2017 BV404_RS09935 56a2dcf45c84a3010d9da78d987960c0 635 PIRSF PIRSF002583 1 635 9.5E-214 T 09-03-2017 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 BV404_RS09935 56a2dcf45c84a3010d9da78d987960c0 635 Pfam PF00183 Hsp90 protein 229 632 2.0E-127 T 09-03-2017 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 BV404_RS09935 56a2dcf45c84a3010d9da78d987960c0 635 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 187 3.3E-14 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS04070 da666bdbbe2d66c835194e7b1118b37f 341 Pfam PF04909 Amidohydrolase 3 331 5.5E-53 T 09-03-2017 IPR006680 Amidohydrolase-related GO:0016787 BV404_RS04070 da666bdbbe2d66c835194e7b1118b37f 341 SUPERFAMILY SSF51556 1 333 5.76E-85 T 09-03-2017 IPR032466 Metal-dependent hydrolase BV404_RS04070 da666bdbbe2d66c835194e7b1118b37f 341 Gene3D G3DSA:3.20.20.140 1 339 3.0E-83 T 09-03-2017 BV404_RS04695 754874562e7d0a6db6794320bd26e2b5 333 SUPERFAMILY SSF103088 183 312 2.35E-28 T 09-03-2017 IPR006665 OmpA-like domain BV404_RS04695 754874562e7d0a6db6794320bd26e2b5 333 Pfam PF00691 OmpA family 210 306 2.2E-19 T 09-03-2017 IPR006665 OmpA-like domain BV404_RS04695 754874562e7d0a6db6794320bd26e2b5 333 Gene3D G3DSA:3.30.1330.60 205 313 3.0E-29 T 09-03-2017 IPR006665 OmpA-like domain BV404_RS04695 754874562e7d0a6db6794320bd26e2b5 333 PRINTS PR01021 OMPA domain signature 211 233 9.6E-6 T 09-03-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BV404_RS04695 754874562e7d0a6db6794320bd26e2b5 333 PRINTS PR01021 OMPA domain signature 257 273 9.6E-6 T 09-03-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BV404_RS04695 754874562e7d0a6db6794320bd26e2b5 333 PRINTS PR01021 OMPA domain signature 242 257 9.6E-6 T 09-03-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BV404_RS10450 a03096f73612bb114751471c11a0ceb0 720 Pfam PF13807 G-rich domain on putative tyrosine kinase 369 449 2.7E-34 T 09-03-2017 IPR032807 Tyrosine kinase, G-rich domain BV404_RS10450 a03096f73612bb114751471c11a0ceb0 720 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 531 700 6.0E-12 T 09-03-2017 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain BV404_RS10450 a03096f73612bb114751471c11a0ceb0 720 Gene3D G3DSA:3.40.50.300 528 704 7.4E-33 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS10450 a03096f73612bb114751471c11a0ceb0 720 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 509 712 8.2E-53 T 09-03-2017 IPR005702 Exopolysaccharide synthesis protein GO:0045226 BV404_RS10450 a03096f73612bb114751471c11a0ceb0 720 Pfam PF02706 Chain length determinant protein 15 254 4.9E-41 T 09-03-2017 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 BV404_RS10450 a03096f73612bb114751471c11a0ceb0 720 SUPERFAMILY SSF52540 527 707 4.92E-36 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS00770 5faf778f850819b2126324cb4fa55edc 170 Pfam PF04351 Pilus assembly protein, PilP 24 169 2.4E-42 T 09-03-2017 IPR007446 Pilus assembly protein PilP BV404_RS00770 5faf778f850819b2126324cb4fa55edc 170 PIRSF PIRSF016481 1 170 1.8E-57 T 09-03-2017 IPR007446 Pilus assembly protein PilP BV404_RS12410 935506e26fd848083be1a7ff0f379b17 784 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 9 758 20.798 T 09-03-2017 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 BV404_RS12410 935506e26fd848083be1a7ff0f379b17 784 Pfam PF04453 Organic solvent tolerance protein 297 685 3.2E-109 T 09-03-2017 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 BV404_RS12410 935506e26fd848083be1a7ff0f379b17 784 Pfam PF03968 OstA-like protein 57 189 3.3E-19 T 09-03-2017 IPR005653 Organic solvent tolerance-like, N-terminal BV404_RS12410 935506e26fd848083be1a7ff0f379b17 784 Gene3D G3DSA:2.60.450.10 51 204 3.8E-27 T 09-03-2017 BV404_RS01225 f6d9cdc3bafaf274a832ecf9de047678 238 Pfam PF00005 ABC transporter 19 161 2.3E-30 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS01225 f6d9cdc3bafaf274a832ecf9de047678 238 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 215 1.1E-102 T 09-03-2017 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0006810|GO:0016021|GO:0042626 BV404_RS01225 f6d9cdc3bafaf274a832ecf9de047678 238 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS01225 f6d9cdc3bafaf274a832ecf9de047678 238 Gene3D G3DSA:3.40.50.300 1 225 5.2E-61 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS01225 f6d9cdc3bafaf274a832ecf9de047678 238 SUPERFAMILY SSF52540 1 234 5.54E-61 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS01225 f6d9cdc3bafaf274a832ecf9de047678 238 SMART SM00382 24 214 4.9E-16 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS12585 2fa03267be847f1387ba5b139e9d2f7f 160 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 4.3E-7 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site BV404_RS12585 2fa03267be847f1387ba5b139e9d2f7f 160 SUPERFAMILY SSF54523 7 79 2.9E-8 T 09-03-2017 BV404_RS12585 2fa03267be847f1387ba5b139e9d2f7f 160 Pfam PF13633 Prokaryotic N-terminal methylation site 5 27 1.8E-5 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site BV404_RS00320 314ac3b433e27797117d0ba6541b5389 601 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 504 515 - T 09-03-2017 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BV404_RS00320 314ac3b433e27797117d0ba6541b5389 601 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 155 165 - T 09-03-2017 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BV404_RS00320 314ac3b433e27797117d0ba6541b5389 601 SUPERFAMILY SSF52016 418 598 7.85E-54 T 09-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel BV404_RS00320 314ac3b433e27797117d0ba6541b5389 601 Pfam PF00920 Dehydratase family 67 594 5.4E-148 T 09-03-2017 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BV404_RS00320 314ac3b433e27797117d0ba6541b5389 601 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 5 597 3.7E-247 T 09-03-2017 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 BV404_RS00320 314ac3b433e27797117d0ba6541b5389 601 SUPERFAMILY SSF143975 3 414 2.35E-129 T 09-03-2017 BV404_RS05815 a7fad829489f869187401a613c0fce56 445 Pfam PF03882 MukF winged-helix domain 10 122 1.4E-53 T 09-03-2017 IPR033439 Chromosome partition protein MukF, winged-helix domain BV404_RS05815 a7fad829489f869187401a613c0fce56 445 SUPERFAMILY SSF140570 124 286 9.29E-78 T 09-03-2017 IPR033440 Chromosome partition protein MukF, middle domain BV404_RS05815 a7fad829489f869187401a613c0fce56 445 SUPERFAMILY SSF46785 13 123 9.25E-45 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS05815 a7fad829489f869187401a613c0fce56 445 PIRSF PIRSF018282 1 445 1.1E-247 T 09-03-2017 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 BV404_RS05815 a7fad829489f869187401a613c0fce56 445 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 6 445 54.619 T 09-03-2017 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 BV404_RS05815 a7fad829489f869187401a613c0fce56 445 Pfam PF17192 MukF middle domain 126 286 4.8E-80 T 09-03-2017 IPR033440 Chromosome partition protein MukF, middle domain BV404_RS05815 a7fad829489f869187401a613c0fce56 445 Pfam PF17193 MukF C-terminal domain 288 445 8.5E-79 T 09-03-2017 IPR033441 Chromosome partition protein MukF, C-terminal domain BV404_RS05815 a7fad829489f869187401a613c0fce56 445 Gene3D G3DSA:1.10.10.10 29 123 7.9E-45 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS10865 396ef93149f5cad4bfe74b0261795b80 487 Gene3D G3DSA:3.20.20.70 2 485 3.7E-198 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS10865 396ef93149f5cad4bfe74b0261795b80 487 PIRSF PIRSF000130 1 487 3.0E-201 T 09-03-2017 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-73817 BV404_RS10865 396ef93149f5cad4bfe74b0261795b80 487 SMART SM01240 7 473 0.0 T 09-03-2017 BV404_RS10865 396ef93149f5cad4bfe74b0261795b80 487 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 84.687 T 09-03-2017 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-73817 BV404_RS10865 396ef93149f5cad4bfe74b0261795b80 487 SMART SM00116 96 144 4.1E-13 T 09-03-2017 IPR000644 CBS domain BV404_RS10865 396ef93149f5cad4bfe74b0261795b80 487 SMART SM00116 158 206 0.001 T 09-03-2017 IPR000644 CBS domain BV404_RS10865 396ef93149f5cad4bfe74b0261795b80 487 SUPERFAMILY SSF51412 217 477 2.35E-125 T 09-03-2017 BV404_RS10865 396ef93149f5cad4bfe74b0261795b80 487 SUPERFAMILY SSF51412 1 90 2.35E-125 T 09-03-2017 BV404_RS10865 396ef93149f5cad4bfe74b0261795b80 487 SUPERFAMILY SSF54631 94 203 1.23E-25 T 09-03-2017 BV404_RS10865 396ef93149f5cad4bfe74b0261795b80 487 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 1.5E-196 T 09-03-2017 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-73817 BV404_RS10865 396ef93149f5cad4bfe74b0261795b80 487 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 5.7E-162 T 09-03-2017 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 BV404_RS10865 396ef93149f5cad4bfe74b0261795b80 487 Pfam PF00571 CBS domain 149 201 0.0065 T 09-03-2017 IPR000644 CBS domain BV404_RS10865 396ef93149f5cad4bfe74b0261795b80 487 Pfam PF00571 CBS domain 95 140 1.3E-10 T 09-03-2017 IPR000644 CBS domain BV404_RS10865 396ef93149f5cad4bfe74b0261795b80 487 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 09-03-2017 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 BV404_RS11435 ff9a2b2f634dd550a2df19d0c781006e 265 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 9 17 - T 09-03-2017 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 BV404_RS11435 ff9a2b2f634dd550a2df19d0c781006e 265 Pfam PF01026 TatD related DNase 10 260 9.0E-64 T 09-03-2017 IPR001130 TatD family GO:0016788 BV404_RS11435 ff9a2b2f634dd550a2df19d0c781006e 265 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 197 213 - T 09-03-2017 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 BV404_RS11435 ff9a2b2f634dd550a2df19d0c781006e 265 SUPERFAMILY SSF51556 9 262 1.15E-73 T 09-03-2017 IPR032466 Metal-dependent hydrolase BV404_RS11435 ff9a2b2f634dd550a2df19d0c781006e 265 PIRSF PIRSF005902 1 265 9.0E-65 T 09-03-2017 IPR001130 TatD family GO:0016788 BV404_RS11435 ff9a2b2f634dd550a2df19d0c781006e 265 Gene3D G3DSA:3.20.20.140 4 263 3.1E-75 T 09-03-2017 BV404_RS02295 2e92288d0123992238dd7c437fd08820 444 Pfam PF01554 MatE 15 176 1.3E-21 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BV404_RS02295 2e92288d0123992238dd7c437fd08820 444 Pfam PF01554 MatE 240 399 4.7E-12 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BV404_RS02295 2e92288d0123992238dd7c437fd08820 444 TIGRFAM TIGR00797 matE: MATE efflux family protein 15 410 7.4E-50 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BV404_RS02295 2e92288d0123992238dd7c437fd08820 444 PIRSF PIRSF006603 1 434 1.2E-68 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BV404_RS04625 7f683507e313f4bf1b16a34dfdebfb2e 167 Pfam PF03748 Flagellar basal body-associated protein FliL 68 167 4.0E-16 T 09-03-2017 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 BV404_RS04660 b79355616b8d39f76d8f937de5e1035a 697 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 141 164 - T 09-03-2017 IPR025505 FHIPEP conserved site BV404_RS04660 b79355616b8d39f76d8f937de5e1035a 697 PIRSF PIRSF005419 2 697 6.4E-221 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BV404_RS04660 b79355616b8d39f76d8f937de5e1035a 697 Pfam PF00771 FHIPEP family 25 688 5.3E-240 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BV404_RS04660 b79355616b8d39f76d8f937de5e1035a 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 236 250 6.0E-55 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BV404_RS04660 b79355616b8d39f76d8f937de5e1035a 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 32 45 6.0E-55 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BV404_RS04660 b79355616b8d39f76d8f937de5e1035a 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 69 88 6.0E-55 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BV404_RS04660 b79355616b8d39f76d8f937de5e1035a 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 185 202 6.0E-55 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BV404_RS04660 b79355616b8d39f76d8f937de5e1035a 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 155 173 6.0E-55 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BV404_RS04660 b79355616b8d39f76d8f937de5e1035a 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 136 152 6.0E-55 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BV404_RS08930 1af620fd6eb0cbe9c4a1e36975017406 626 SMART SM00283 364 625 1.8E-52 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 BV404_RS08930 1af620fd6eb0cbe9c4a1e36975017406 626 Gene3D G3DSA:1.10.287.950 382 595 3.0E-47 T 09-03-2017 BV404_RS08930 1af620fd6eb0cbe9c4a1e36975017406 626 Pfam PF00672 HAMP domain 276 344 1.3E-8 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 BV404_RS08930 1af620fd6eb0cbe9c4a1e36975017406 626 SMART SM00304 295 349 5.8E-6 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 BV404_RS08930 1af620fd6eb0cbe9c4a1e36975017406 626 SUPERFAMILY SSF58104 315 625 8.02E-61 T 09-03-2017 BV404_RS08930 1af620fd6eb0cbe9c4a1e36975017406 626 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 427 624 1.4E-40 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 BV404_RS14800 187c8eb9d0ed1857498b5ccc112e4283 224 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS14800 187c8eb9d0ed1857498b5ccc112e4283 224 Pfam PF00005 ABC transporter 18 165 3.0E-36 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS14800 187c8eb9d0ed1857498b5ccc112e4283 224 SMART SM00382 27 215 2.1E-9 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS14800 187c8eb9d0ed1857498b5ccc112e4283 224 SUPERFAMILY SSF52540 1 220 2.59E-64 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS14800 187c8eb9d0ed1857498b5ccc112e4283 224 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 5.1E-91 T 09-03-2017 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 BV404_RS14800 187c8eb9d0ed1857498b5ccc112e4283 224 Gene3D G3DSA:3.40.50.300 1 201 5.7E-66 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS03965 644ee994e41bb221adebc0c8f6eeb6d8 68 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 56 4.8E-17 T 09-03-2017 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 BV404_RS03965 644ee994e41bb221adebc0c8f6eeb6d8 68 Pfam PF04995 Heme exporter protein D (CcmD) 13 56 5.1E-17 T 09-03-2017 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 BV404_RS14860 e7802392da4855905fd5ba0a97c3c877 434 TIGRFAM TIGR00797 matE: MATE efflux family protein 11 405 6.8E-70 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BV404_RS14860 e7802392da4855905fd5ba0a97c3c877 434 Pfam PF01554 MatE 238 391 3.2E-11 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BV404_RS14860 e7802392da4855905fd5ba0a97c3c877 434 Pfam PF01554 MatE 11 171 1.1E-22 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BV404_RS00430 7f55838214917061c06d78a6991d840e 304 TIGRFAM TIGR00746 arcC: carbamate kinase 5 301 1.7E-120 T 09-03-2017 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 BV404_RS00430 7f55838214917061c06d78a6991d840e 304 Gene3D G3DSA:3.40.1160.10 3 301 2.3E-100 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase BV404_RS00430 7f55838214917061c06d78a6991d840e 304 PIRSF PIRSF000723 2 302 3.2E-114 T 09-03-2017 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 BV404_RS00430 7f55838214917061c06d78a6991d840e 304 Pfam PF00696 Amino acid kinase family 5 280 3.5E-30 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase BV404_RS00430 7f55838214917061c06d78a6991d840e 304 PRINTS PR01469 Bacterial carbamate kinase signature 206 221 2.5E-61 T 09-03-2017 BV404_RS00430 7f55838214917061c06d78a6991d840e 304 PRINTS PR01469 Bacterial carbamate kinase signature 44 63 2.5E-61 T 09-03-2017 BV404_RS00430 7f55838214917061c06d78a6991d840e 304 PRINTS PR01469 Bacterial carbamate kinase signature 176 194 2.5E-61 T 09-03-2017 BV404_RS00430 7f55838214917061c06d78a6991d840e 304 PRINTS PR01469 Bacterial carbamate kinase signature 153 172 2.5E-61 T 09-03-2017 BV404_RS00430 7f55838214917061c06d78a6991d840e 304 PRINTS PR01469 Bacterial carbamate kinase signature 257 272 2.5E-61 T 09-03-2017 BV404_RS00430 7f55838214917061c06d78a6991d840e 304 PRINTS PR01469 Bacterial carbamate kinase signature 74 92 2.5E-61 T 09-03-2017 BV404_RS00430 7f55838214917061c06d78a6991d840e 304 PRINTS PR01469 Bacterial carbamate kinase signature 105 124 2.5E-61 T 09-03-2017 BV404_RS00430 7f55838214917061c06d78a6991d840e 304 SUPERFAMILY SSF53633 4 300 4.97E-79 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase BV404_RS13770 2bbcb56920d13321a277192213c10cb9 140 SMART SM00347 23 124 8.4E-17 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BV404_RS13770 2bbcb56920d13321a277192213c10cb9 140 Gene3D G3DSA:1.10.10.10 4 138 1.1E-34 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS13770 2bbcb56920d13321a277192213c10cb9 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 5.4E-15 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BV404_RS13770 2bbcb56920d13321a277192213c10cb9 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 5.4E-15 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BV404_RS13770 2bbcb56920d13321a277192213c10cb9 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 5.4E-15 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BV404_RS13770 2bbcb56920d13321a277192213c10cb9 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 5.4E-15 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BV404_RS13770 2bbcb56920d13321a277192213c10cb9 140 SUPERFAMILY SSF46785 5 137 2.87E-32 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS13770 2bbcb56920d13321a277192213c10cb9 140 Pfam PF01047 MarR family 38 88 5.0E-11 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BV404_RS10400 42665351e059232d9dcffddefac278bb 290 Gene3D G3DSA:3.40.50.720 2 180 1.1E-26 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS10400 42665351e059232d9dcffddefac278bb 290 Pfam PF04321 RmlD substrate binding domain 2 162 9.1E-27 T 09-03-2017 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581 BV404_RS10400 42665351e059232d9dcffddefac278bb 290 SUPERFAMILY SSF51735 2 284 1.84E-54 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS09915 681e4264c5ecc629b3f581d877bb3888 167 SMART SM00738 1 101 2.1E-31 T 09-03-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 BV404_RS09915 681e4264c5ecc629b3f581d877bb3888 167 SUPERFAMILY SSF82679 1 103 6.54E-30 T 09-03-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 BV404_RS09915 681e4264c5ecc629b3f581d877bb3888 167 Gene3D G3DSA:3.30.70.940 1 100 4.0E-21 T 09-03-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 BV404_RS09915 681e4264c5ecc629b3f581d877bb3888 167 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 163 2.0E-63 T 09-03-2017 IPR010215 Transcription antitermination protein RfaH GO:0006355 BV404_RS09915 681e4264c5ecc629b3f581d877bb3888 167 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 166 45.677 T 09-03-2017 IPR010215 Transcription antitermination protein RfaH GO:0006355 BV404_RS09915 681e4264c5ecc629b3f581d877bb3888 167 Pfam PF02357 Transcription termination factor nusG 2 92 3.4E-21 T 09-03-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 BV404_RS08870 675f1a249a79b589e52c757008a3ec01 691 Gene3D G3DSA:3.40.50.300 506 667 1.9E-8 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS08870 675f1a249a79b589e52c757008a3ec01 691 SMART SM00491 535 671 3.1E-26 T 09-03-2017 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 BV404_RS08870 675f1a249a79b589e52c757008a3ec01 691 SUPERFAMILY SSF52540 195 268 7.48E-15 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS08870 675f1a249a79b589e52c757008a3ec01 691 SUPERFAMILY SSF52540 48 99 7.48E-15 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS08870 675f1a249a79b589e52c757008a3ec01 691 SUPERFAMILY SSF52540 445 459 7.48E-15 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS08870 675f1a249a79b589e52c757008a3ec01 691 SUPERFAMILY SSF52540 491 665 7.48E-15 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS08870 675f1a249a79b589e52c757008a3ec01 691 Gene3D G3DSA:3.40.50.300 212 258 5.3E-13 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS08870 675f1a249a79b589e52c757008a3ec01 691 Gene3D G3DSA:3.40.50.300 31 131 5.3E-13 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS08870 675f1a249a79b589e52c757008a3ec01 691 Pfam PF13307 Helicase C-terminal domain 527 684 4.3E-35 T 09-03-2017 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 BV404_RS08870 675f1a249a79b589e52c757008a3ec01 691 Pfam PF06733 DEAD_2 194 262 2.3E-6 T 09-03-2017 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 BV404_RS03850 16014801fc902c2fe48c9111437997a4 76 Pfam PF09012 FeoC like transcriptional regulator 2 52 2.1E-12 T 09-03-2017 IPR015102 Transcriptional regulator HTH-type, FeoC BV404_RS03850 16014801fc902c2fe48c9111437997a4 76 Gene3D G3DSA:1.10.10.10 8 48 4.6E-4 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS03850 16014801fc902c2fe48c9111437997a4 76 SUPERFAMILY SSF46785 1 53 1.36E-11 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS07460 ee72ea666937b5d4ca3d1c29ad6e4675 172 Gene3D G3DSA:2.30.110.20 1 166 1.8E-33 T 09-03-2017 IPR008514 Type VI secretion system effector, Hcp BV404_RS07460 ee72ea666937b5d4ca3d1c29ad6e4675 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 2.5E-33 T 09-03-2017 IPR008514 Type VI secretion system effector, Hcp BV404_RS07460 ee72ea666937b5d4ca3d1c29ad6e4675 172 SUPERFAMILY SSF141452 3 168 3.14E-39 T 09-03-2017 IPR008514 Type VI secretion system effector, Hcp BV404_RS07460 ee72ea666937b5d4ca3d1c29ad6e4675 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 6.6E-64 T 09-03-2017 IPR008514 Type VI secretion system effector, Hcp BV404_RS06210 17247c1918690f4dd6f8a0ec3939d966 335 Gene3D G3DSA:3.40.50.410 96 283 4.4E-24 T 09-03-2017 IPR002035 von Willebrand factor, type A BV404_RS06210 17247c1918690f4dd6f8a0ec3939d966 335 SUPERFAMILY SSF53300 94 284 1.39E-33 T 09-03-2017 IPR002035 von Willebrand factor, type A BV404_RS06210 17247c1918690f4dd6f8a0ec3939d966 335 SMART SM00327 95 288 5.9E-18 T 09-03-2017 IPR002035 von Willebrand factor, type A BV404_RS06210 17247c1918690f4dd6f8a0ec3939d966 335 Pfam PF00092 von Willebrand factor type A domain 97 278 1.3E-21 T 09-03-2017 IPR002035 von Willebrand factor, type A BV404_RS08515 d092b92cb21b90bed9984efeeda8a420 98 SUPERFAMILY SSF54909 1 98 2.86E-32 T 09-03-2017 IPR011008 Dimeric alpha-beta barrel BV404_RS08515 d092b92cb21b90bed9984efeeda8a420 98 Gene3D G3DSA:3.30.70.1060 1 98 1.8E-37 T 09-03-2017 BV404_RS08515 d092b92cb21b90bed9984efeeda8a420 98 Pfam PF03795 YCII-related domain 1 95 1.2E-29 T 09-03-2017 IPR005545 YCII-related BV404_RS08960 11df465c3731609445079c476112921b 422 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 422 40.802 T 09-03-2017 IPR006698 Uncharacterised protein family UPF0229 BV404_RS08960 11df465c3731609445079c476112921b 422 Pfam PF04285 Protein of unknown function (DUF444) 3 420 9.0E-189 T 09-03-2017 IPR006698 Uncharacterised protein family UPF0229 BV404_RS04005 9946f9ca2a5fee9e2954333d613311fd 167 Pfam PF11993 Ribosomal S4P (gammaproteobacterial) 1 163 3.9E-62 T 09-03-2017 IPR021879 Ribosomal S4P (gammaproteobacterial) BV404_RS06025 b8a4272da15a06de5feade4388c19a48 700 Pfam PF13899 Thioredoxin-like 594 671 2.2E-9 T 09-03-2017 BV404_RS06025 b8a4272da15a06de5feade4388c19a48 700 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 307 512 3.0E-11 T 09-03-2017 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 BV404_RS06025 b8a4272da15a06de5feade4388c19a48 700 Gene3D G3DSA:3.40.30.10 580 671 1.8E-8 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS06025 b8a4272da15a06de5feade4388c19a48 700 SUPERFAMILY SSF52833 577 672 7.75E-11 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS06025 b8a4272da15a06de5feade4388c19a48 700 Pfam PF11412 Disulphide bond corrector protein DsbC 57 160 2.2E-14 T 09-03-2017 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain BV404_RS03005 69b8e02b58bfb8eeb02d898498e3083f 252 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 252 45.138 T 09-03-2017 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 BV404_RS03005 69b8e02b58bfb8eeb02d898498e3083f 252 Pfam PF00753 Metallo-beta-lactamase superfamily 14 166 4.1E-20 T 09-03-2017 IPR001279 Metallo-beta-lactamase BV404_RS03005 69b8e02b58bfb8eeb02d898498e3083f 252 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 167 252 3.0E-25 T 09-03-2017 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 BV404_RS03005 69b8e02b58bfb8eeb02d898498e3083f 252 SUPERFAMILY SSF56281 3 252 2.88E-69 T 09-03-2017 IPR001279 Metallo-beta-lactamase BV404_RS03005 69b8e02b58bfb8eeb02d898498e3083f 252 PIRSF PIRSF005457 1 252 9.0E-98 T 09-03-2017 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 BV404_RS03005 69b8e02b58bfb8eeb02d898498e3083f 252 SMART SM00849 12 166 4.6E-35 T 09-03-2017 IPR001279 Metallo-beta-lactamase BV404_RS03005 69b8e02b58bfb8eeb02d898498e3083f 252 Gene3D G3DSA:3.60.15.10 4 252 5.9E-86 T 09-03-2017 IPR001279 Metallo-beta-lactamase BV404_RS03005 69b8e02b58bfb8eeb02d898498e3083f 252 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 252 6.8E-104 T 09-03-2017 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 BV404_RS12905 395c430980c1fa7a3e8e956c7d842f68 326 SUPERFAMILY SSF50998 24 318 7.61E-46 T 09-03-2017 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily BV404_RS12905 395c430980c1fa7a3e8e956c7d842f68 326 SMART SM00320 56 106 94.0 T 09-03-2017 IPR001680 WD40 repeat GO:0005515 BV404_RS12905 395c430980c1fa7a3e8e956c7d842f68 326 SMART SM00320 151 189 3.2E-5 T 09-03-2017 IPR001680 WD40 repeat GO:0005515 BV404_RS12905 395c430980c1fa7a3e8e956c7d842f68 326 SMART SM00320 192 230 0.0079 T 09-03-2017 IPR001680 WD40 repeat GO:0005515 BV404_RS12905 395c430980c1fa7a3e8e956c7d842f68 326 SMART SM00320 236 274 5.2 T 09-03-2017 IPR001680 WD40 repeat GO:0005515 BV404_RS12905 395c430980c1fa7a3e8e956c7d842f68 326 SMART SM00320 285 323 78.0 T 09-03-2017 IPR001680 WD40 repeat GO:0005515 BV404_RS12905 395c430980c1fa7a3e8e956c7d842f68 326 Pfam PF13360 PQQ-like domain 173 283 3.6E-5 T 09-03-2017 IPR002372 Pyrrolo-quinoline quinone repeat BV404_RS12905 395c430980c1fa7a3e8e956c7d842f68 326 Gene3D G3DSA:2.130.10.10 35 93 3.5E-5 T 09-03-2017 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 BV404_RS12905 395c430980c1fa7a3e8e956c7d842f68 326 Gene3D G3DSA:2.130.10.10 94 325 2.7E-40 T 09-03-2017 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 BV404_RS12905 395c430980c1fa7a3e8e956c7d842f68 326 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 176 190 - T 09-03-2017 IPR019775 WD40 repeat, conserved site BV404_RS10560 f2688a09ff053a606aa6ecad97240715 311 Gene3D G3DSA:3.40.190.10 180 259 4.3E-17 T 09-03-2017 BV404_RS10560 f2688a09ff053a606aa6ecad97240715 311 SUPERFAMILY SSF46785 3 85 3.38E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS10560 f2688a09ff053a606aa6ecad97240715 311 Pfam PF03466 LysR substrate binding domain 91 291 3.0E-38 T 09-03-2017 IPR005119 LysR, substrate-binding BV404_RS10560 f2688a09ff053a606aa6ecad97240715 311 SUPERFAMILY SSF53850 92 296 7.96E-40 T 09-03-2017 BV404_RS10560 f2688a09ff053a606aa6ecad97240715 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.9E-10 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS10560 f2688a09ff053a606aa6ecad97240715 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.9E-10 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS10560 f2688a09ff053a606aa6ecad97240715 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.9E-10 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS10560 f2688a09ff053a606aa6ecad97240715 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 2.8E-21 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BV404_RS10560 f2688a09ff053a606aa6ecad97240715 311 Gene3D G3DSA:3.40.190.10 94 179 8.6E-35 T 09-03-2017 BV404_RS10560 f2688a09ff053a606aa6ecad97240715 311 Gene3D G3DSA:1.10.10.10 1 86 7.6E-28 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS01955 ae77f768e5981b7a7910735c071ae1b2 579 Pfam PF01368 DHH family 71 206 4.0E-10 T 09-03-2017 IPR001667 DDH domain BV404_RS01955 ae77f768e5981b7a7910735c071ae1b2 579 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 20 575 8.5E-158 T 09-03-2017 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 BV404_RS01955 ae77f768e5981b7a7910735c071ae1b2 579 SUPERFAMILY SSF64182 45 464 3.92E-118 T 09-03-2017 BV404_RS01955 ae77f768e5981b7a7910735c071ae1b2 579 Pfam PF02272 DHHA1 domain 380 449 6.6E-14 T 09-03-2017 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 BV404_RS09525 350cb72611b755e2ebd9dbbf7714610e 82 Pfam PF03692 Putative zinc- or iron-chelating domain 3 59 4.4E-6 T 09-03-2017 IPR005358 Putative zinc- or iron-chelating domain containing protein BV404_RS04400 7dc45c569516e8effd2e964a1c8a54c2 178 SUPERFAMILY SSF46565 128 163 5.36E-8 T 09-03-2017 IPR001623 DnaJ domain BV404_RS04400 7dc45c569516e8effd2e964a1c8a54c2 178 Gene3D G3DSA:1.10.287.110 129 163 5.5E-8 T 09-03-2017 IPR001623 DnaJ domain BV404_RS13340 ca8adecfd60557c9ec2a940d29b8fbc5 230 Pfam PF07356 Protein of unknown function (DUF1481) 33 226 5.7E-60 T 09-03-2017 IPR010858 Protein of unknown function DUF1481 BV404_RS13340 ca8adecfd60557c9ec2a940d29b8fbc5 230 PIRSF PIRSF028160 1 230 4.4E-102 T 09-03-2017 IPR016872 Uncharacterised conserved protein UCP028160 BV404_RS20845 c9808397aa212484834bd84ac9b126d4 119 Pfam PF12698 ABC-2 family transporter protein 12 118 3.3E-15 T 09-03-2017 BV404_RS06425 06687d0896f787a897c5d65c1972b441 460 SUPERFAMILY SSF46626 318 460 5.07E-25 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 BV404_RS06425 06687d0896f787a897c5d65c1972b441 460 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 21 460 4.6E-142 T 09-03-2017 IPR010538 Di-haem oxidoreductase, putative peroxidase BV404_RS06425 06687d0896f787a897c5d65c1972b441 460 Gene3D G3DSA:1.10.760.10 322 460 3.9E-19 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 BV404_RS06425 06687d0896f787a897c5d65c1972b441 460 PIRSF PIRSF028099 8 460 1.7E-187 T 09-03-2017 IPR010538 Di-haem oxidoreductase, putative peroxidase BV404_RS05805 467fbbe2da31487c3bef50923c345315 269 Gene3D G3DSA:3.40.50.620 79 210 1.6E-14 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS05805 467fbbe2da31487c3bef50923c345315 269 Pfam PF02698 DUF218 domain 80 240 1.2E-25 T 09-03-2017 IPR003848 Domain of unknown function DUF218 BV404_RS07230 bd7503800648e30fc33b893ce58b022f 123 ProDom PD152235 CAPSID D STRUCTURAL COAT 1 104 5.0E-4 T 09-03-2017 BV404_RS08030 a57c7386f05012edee13a2b60b21725d 174 SUPERFAMILY SSF56925 25 174 3.4E-12 T 09-03-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 BV404_RS08030 a57c7386f05012edee13a2b60b21725d 174 Gene3D G3DSA:2.40.160.20 13 174 2.1E-12 T 09-03-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 BV404_RS08030 a57c7386f05012edee13a2b60b21725d 174 Pfam PF13505 Outer membrane protein beta-barrel domain 12 174 5.2E-12 T 09-03-2017 IPR027385 Outer membrane protein beta-barrel BV404_RS10280 cf96169264b04d8780a00cb0d919ae68 332 Pfam PF02653 Branched-chain amino acid transport system / permease component 43 315 1.1E-42 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 BV404_RS00815 4530fc64a7bd17005f1bab791619530d 872 SUPERFAMILY SSF56219 771 848 1.44E-29 T 09-03-2017 IPR005135 Endonuclease/exonuclease/phosphatase BV404_RS00815 4530fc64a7bd17005f1bab791619530d 872 SUPERFAMILY SSF56219 474 734 1.44E-29 T 09-03-2017 IPR005135 Endonuclease/exonuclease/phosphatase BV404_RS00815 4530fc64a7bd17005f1bab791619530d 872 Gene3D G3DSA:3.60.10.10 782 847 2.4E-22 T 09-03-2017 IPR005135 Endonuclease/exonuclease/phosphatase BV404_RS00815 4530fc64a7bd17005f1bab791619530d 872 Gene3D G3DSA:3.60.10.10 476 745 2.4E-22 T 09-03-2017 IPR005135 Endonuclease/exonuclease/phosphatase BV404_RS00815 4530fc64a7bd17005f1bab791619530d 872 Pfam PF00932 Lamin Tail Domain 25 134 6.0E-14 T 09-03-2017 IPR001322 Lamin Tail Domain BV404_RS00815 4530fc64a7bd17005f1bab791619530d 872 SUPERFAMILY SSF74853 41 131 8.63E-6 T 09-03-2017 IPR001322 Lamin Tail Domain BV404_RS06260 f08c582b531b10cb124f9a7d7b94428b 402 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 16 395 2.0E-118 T 09-03-2017 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 BV404_RS06260 f08c582b531b10cb124f9a7d7b94428b 402 SUPERFAMILY SSF103473 8 400 6.67E-63 T 09-03-2017 IPR020846 Major facilitator superfamily domain BV404_RS06260 f08c582b531b10cb124f9a7d7b94428b 402 Pfam PF07690 Major Facilitator Superfamily 26 366 1.5E-49 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BV404_RS06260 f08c582b531b10cb124f9a7d7b94428b 402 Gene3D G3DSA:1.20.1250.20 225 398 1.7E-7 T 09-03-2017 BV404_RS06260 f08c582b531b10cb124f9a7d7b94428b 402 Gene3D G3DSA:1.20.1250.20 21 197 8.9E-30 T 09-03-2017 BV404_RS10835 6b00083b69445c0c21209f48121aa0d4 398 PIRSF PIRSF005962 9 398 3.2E-117 T 09-03-2017 IPR017439 Amidohydrolase GO:0016787 BV404_RS10835 6b00083b69445c0c21209f48121aa0d4 398 Pfam PF01546 Peptidase family M20/M25/M40 80 392 6.4E-34 T 09-03-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 BV404_RS10835 6b00083b69445c0c21209f48121aa0d4 398 Gene3D G3DSA:3.40.630.10 19 185 3.2E-93 T 09-03-2017 BV404_RS10835 6b00083b69445c0c21209f48121aa0d4 398 Gene3D G3DSA:3.40.630.10 305 397 3.2E-93 T 09-03-2017 BV404_RS10835 6b00083b69445c0c21209f48121aa0d4 398 Pfam PF07687 Peptidase dimerisation domain 193 285 3.1E-8 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain BV404_RS10835 6b00083b69445c0c21209f48121aa0d4 398 SUPERFAMILY SSF55031 190 303 7.98E-28 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain BV404_RS10835 6b00083b69445c0c21209f48121aa0d4 398 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 22 382 2.4E-104 T 09-03-2017 IPR017439 Amidohydrolase GO:0016787 BV404_RS10835 6b00083b69445c0c21209f48121aa0d4 398 SUPERFAMILY SSF53187 19 204 2.37E-85 T 09-03-2017 BV404_RS10835 6b00083b69445c0c21209f48121aa0d4 398 SUPERFAMILY SSF53187 305 396 2.37E-85 T 09-03-2017 BV404_RS10835 6b00083b69445c0c21209f48121aa0d4 398 Gene3D G3DSA:3.30.70.360 188 304 2.3E-35 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain BV404_RS10115 1b740c2d59fd60c1d8674c119f3390fa 156 SUPERFAMILY SSF75217 2 154 4.34E-50 T 09-03-2017 IPR029028 Alpha/beta knot methyltransferases BV404_RS10115 1b740c2d59fd60c1d8674c119f3390fa 156 Pfam PF02590 Predicted SPOUT methyltransferase 2 154 4.4E-49 T 09-03-2017 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 BV404_RS10115 1b740c2d59fd60c1d8674c119f3390fa 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 1 156 1.7E-77 T 09-03-2017 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 BV404_RS10115 1b740c2d59fd60c1d8674c119f3390fa 156 PIRSF PIRSF004505 1 155 3.2E-44 T 09-03-2017 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 BV404_RS10115 1b740c2d59fd60c1d8674c119f3390fa 156 Gene3D G3DSA:3.40.1280.10 2 155 3.6E-55 T 09-03-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BV404_RS10115 1b740c2d59fd60c1d8674c119f3390fa 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 27.411 T 09-03-2017 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 BV404_RS06030 6994c644bff12aec7da3ed25e92d9c82 161 Pfam PF08534 Redoxin 40 145 5.9E-12 T 09-03-2017 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 BV404_RS06030 6994c644bff12aec7da3ed25e92d9c82 161 SUPERFAMILY SSF52833 34 158 2.71E-27 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS06030 6994c644bff12aec7da3ed25e92d9c82 161 Gene3D G3DSA:3.40.30.10 10 150 4.1E-26 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS10730 399cb1b05732b86d581b0c01b5967714 145 Pfam PF07963 Prokaryotic N-terminal methylation motif 18 35 2.4E-4 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site BV404_RS10730 399cb1b05732b86d581b0c01b5967714 145 SUPERFAMILY SSF54523 19 129 4.03E-20 T 09-03-2017 BV404_RS10730 399cb1b05732b86d581b0c01b5967714 145 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 40 124 2.6E-14 T 09-03-2017 IPR031982 Type IV minor pilin ComP BV404_RS10730 399cb1b05732b86d581b0c01b5967714 145 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 18 39 2.1E-7 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site BV404_RS10730 399cb1b05732b86d581b0c01b5967714 145 Gene3D G3DSA:3.30.700.10 20 115 1.5E-15 T 09-03-2017 BV404_RS13035 2c740ab72b91f8b6df7edf56b4f9e0ef 295 Pfam PF00892 EamA-like transporter family 5 134 9.0E-15 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 BV404_RS13035 2c740ab72b91f8b6df7edf56b4f9e0ef 295 Pfam PF00892 EamA-like transporter family 157 294 3.9E-15 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 BV404_RS13035 2c740ab72b91f8b6df7edf56b4f9e0ef 295 SUPERFAMILY SSF103481 216 294 6.15E-10 T 09-03-2017 BV404_RS13035 2c740ab72b91f8b6df7edf56b4f9e0ef 295 SUPERFAMILY SSF103481 36 140 8.11E-10 T 09-03-2017 BV404_RS00185 a324a4d62b103dfb7794f396ad73acd6 632 Pfam PF05170 AsmA family 1 571 6.1E-113 T 09-03-2017 IPR007844 AsmA BV404_RS14575 0f0c5a35bd3040d8d010595e7fa29ef2 253 PIRSF PIRSF005902 1 253 1.2E-69 T 09-03-2017 IPR001130 TatD family GO:0016788 BV404_RS14575 0f0c5a35bd3040d8d010595e7fa29ef2 253 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 1 252 2.2E-70 T 09-03-2017 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 BV404_RS14575 0f0c5a35bd3040d8d010595e7fa29ef2 253 Pfam PF01026 TatD related DNase 2 252 4.7E-63 T 09-03-2017 IPR001130 TatD family GO:0016788 BV404_RS14575 0f0c5a35bd3040d8d010595e7fa29ef2 253 Gene3D G3DSA:3.20.20.140 1 252 7.5E-76 T 09-03-2017 BV404_RS14575 0f0c5a35bd3040d8d010595e7fa29ef2 253 SUPERFAMILY SSF51556 1 252 4.42E-78 T 09-03-2017 IPR032466 Metal-dependent hydrolase BV404_RS06465 d1ccd83435c8b4a4adc77111a053d350 362 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 41 327 7.9E-72 T 09-03-2017 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 BV404_RS06465 d1ccd83435c8b4a4adc77111a053d350 362 PIRSF PIRSF039026 4 362 3.1E-142 T 09-03-2017 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like BV404_RS06165 08ba82c8b25a1793a6052f2125b3f853 70 PIRSF PIRSF002599 1 70 6.4E-26 T 09-03-2017 IPR012156 Cold shock, CspA GO:0003676 BV404_RS06165 08ba82c8b25a1793a6052f2125b3f853 70 SUPERFAMILY SSF50249 4 69 1.22E-25 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS06165 08ba82c8b25a1793a6052f2125b3f853 70 PRINTS PR00050 Cold shock protein signature 28 37 6.2E-18 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BV404_RS06165 08ba82c8b25a1793a6052f2125b3f853 70 PRINTS PR00050 Cold shock protein signature 7 22 6.2E-18 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BV404_RS06165 08ba82c8b25a1793a6052f2125b3f853 70 PRINTS PR00050 Cold shock protein signature 43 61 6.2E-18 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BV404_RS06165 08ba82c8b25a1793a6052f2125b3f853 70 Pfam PF00313 'Cold-shock' DNA-binding domain 6 69 2.3E-30 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BV404_RS06165 08ba82c8b25a1793a6052f2125b3f853 70 SMART SM00357 6 70 5.2E-32 T 09-03-2017 IPR011129 Cold shock protein GO:0003676 BV404_RS06165 08ba82c8b25a1793a6052f2125b3f853 70 Gene3D G3DSA:2.40.50.140 5 68 6.1E-31 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS11750 24739acde344189d8ff02b6cbcfcdf4b 421 PIRSF PIRSF038885 1 421 6.7E-153 T 09-03-2017 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 BV404_RS11750 24739acde344189d8ff02b6cbcfcdf4b 421 SUPERFAMILY SSF81648 297 411 5.45E-33 T 09-03-2017 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 BV404_RS11750 24739acde344189d8ff02b6cbcfcdf4b 421 Gene3D G3DSA:1.20.810.10 6 415 2.4E-158 T 09-03-2017 IPR027387 Cytochrome b/b6-like domain Reactome: R-HSA-611105 BV404_RS11750 24739acde344189d8ff02b6cbcfcdf4b 421 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 295 396 1.5E-40 T 09-03-2017 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 BV404_RS11750 24739acde344189d8ff02b6cbcfcdf4b 421 SUPERFAMILY SSF81342 248 296 5.81E-93 T 09-03-2017 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 BV404_RS11750 24739acde344189d8ff02b6cbcfcdf4b 421 SUPERFAMILY SSF81342 6 221 5.81E-93 T 09-03-2017 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 BV404_RS11750 24739acde344189d8ff02b6cbcfcdf4b 421 Pfam PF00033 Cytochrome b/b6/petB 23 211 1.5E-66 T 09-03-2017 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 BV404_RS08045 2939c97f2186ddba53d614e4b637324b 391 Gene3D G3DSA:3.30.1490.20 121 196 1.7E-25 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 BV404_RS08045 2939c97f2186ddba53d614e4b637324b 391 Pfam PF02222 ATP-grasp domain 121 293 1.6E-56 T 09-03-2017 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type BV404_RS08045 2939c97f2186ddba53d614e4b637324b 391 SUPERFAMILY SSF51246 317 389 2.51E-18 T 09-03-2017 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BV404_RS08045 2939c97f2186ddba53d614e4b637324b 391 Gene3D G3DSA:3.40.50.20 3 118 5.8E-40 T 09-03-2017 IPR016185 Pre-ATP-grasp domain BV404_RS08045 2939c97f2186ddba53d614e4b637324b 391 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 12 390 6.8E-194 T 09-03-2017 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 BV404_RS08045 2939c97f2186ddba53d614e4b637324b 391 SUPERFAMILY SSF56059 111 313 7.07E-58 T 09-03-2017 BV404_RS08045 2939c97f2186ddba53d614e4b637324b 391 Gene3D G3DSA:3.30.470.20 197 387 1.9E-71 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 BV404_RS08045 2939c97f2186ddba53d614e4b637324b 391 SUPERFAMILY SSF52440 2 110 3.6E-35 T 09-03-2017 IPR016185 Pre-ATP-grasp domain BV404_RS08045 2939c97f2186ddba53d614e4b637324b 391 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 6 390 51.934 T 09-03-2017 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 BV404_RS10100 62d9d239d332b124db2d05ccd100408a 207 Gene3D G3DSA:3.30.160.150 24 169 4.6E-57 T 09-03-2017 BV404_RS10100 62d9d239d332b124db2d05ccd100408a 207 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 9 166 25.471 T 09-03-2017 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 BV404_RS10100 62d9d239d332b124db2d05ccd100408a 207 Pfam PF04390 Lipopolysaccharide-assembly 16 161 7.3E-20 T 09-03-2017 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 BV404_RS01425 051a0c8eb1ad766c51b02f1ac4136a48 457 Pfam PF00990 Diguanylate cyclase, GGDEF domain 296 449 1.5E-42 T 09-03-2017 IPR000160 GGDEF domain BV404_RS01425 051a0c8eb1ad766c51b02f1ac4136a48 457 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 295 451 3.0E-47 T 09-03-2017 IPR000160 GGDEF domain BV404_RS01425 051a0c8eb1ad766c51b02f1ac4136a48 457 SUPERFAMILY SSF55073 301 451 1.57E-45 T 09-03-2017 IPR029787 Nucleotide cyclase BV404_RS01425 051a0c8eb1ad766c51b02f1ac4136a48 457 SMART SM00267 285 453 4.6E-56 T 09-03-2017 IPR000160 GGDEF domain BV404_RS01425 051a0c8eb1ad766c51b02f1ac4136a48 457 Gene3D G3DSA:3.30.70.270 298 451 9.3E-49 T 09-03-2017 BV404_RS12915 d0c47577741bea2d138c0ea9e25d3ca1 62 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 59 6.6E-24 T 09-03-2017 IPR019201 Protein of unknown function DUF2065 BV404_RS14100 fb5834256c844a78b8c13fc69f5ae8a4 305 Gene3D G3DSA:1.20.58.180 215 298 1.6E-36 T 09-03-2017 BV404_RS14100 fb5834256c844a78b8c13fc69f5ae8a4 305 Gene3D G3DSA:3.30.930.10 4 214 3.8E-106 T 09-03-2017 BV404_RS14100 fb5834256c844a78b8c13fc69f5ae8a4 305 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 291 5.8E-150 T 09-03-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BV404_RS14100 fb5834256c844a78b8c13fc69f5ae8a4 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 4.2E-71 T 09-03-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BV404_RS14100 fb5834256c844a78b8c13fc69f5ae8a4 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 4.2E-71 T 09-03-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BV404_RS14100 fb5834256c844a78b8c13fc69f5ae8a4 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 4.2E-71 T 09-03-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BV404_RS14100 fb5834256c844a78b8c13fc69f5ae8a4 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 4.2E-71 T 09-03-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BV404_RS14100 fb5834256c844a78b8c13fc69f5ae8a4 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 253 269 4.2E-71 T 09-03-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BV404_RS14100 fb5834256c844a78b8c13fc69f5ae8a4 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 4.2E-71 T 09-03-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BV404_RS14100 fb5834256c844a78b8c13fc69f5ae8a4 305 SUPERFAMILY SSF55681 8 292 1.66E-135 T 09-03-2017 BV404_RS14100 fb5834256c844a78b8c13fc69f5ae8a4 305 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 293 62.28 T 09-03-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BV404_RS14100 fb5834256c844a78b8c13fc69f5ae8a4 305 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 301 7.0E-175 T 09-03-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BV404_RS11135 2c0f82071c9017179ced266b573d8b26 199 Pfam PF01965 DJ-1/PfpI family 3 169 3.0E-40 T 09-03-2017 IPR002818 DJ-1/PfpI BV404_RS11135 2c0f82071c9017179ced266b573d8b26 199 SUPERFAMILY SSF52317 3 191 5.12E-47 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like BV404_RS11135 2c0f82071c9017179ced266b573d8b26 199 Gene3D G3DSA:3.40.50.880 1 190 1.5E-54 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like BV404_RS11135 2c0f82071c9017179ced266b573d8b26 199 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 4 182 1.7E-65 T 09-03-2017 IPR006287 Protein deglycase DJ-1 GO:0006517|GO:0030091 BV404_RS09480 7103243ebdcd97f52197bed3ebb87275 273 Pfam PF11207 Protein of unknown function (DUF2989) 16 218 5.4E-76 T 09-03-2017 IPR021372 Protein of unknown function DUF2989 BV404_RS10825 b72d94770f237a0d130ed2c4f444a9ad 515 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 462 1.1E-134 T 09-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BV404_RS10825 b72d94770f237a0d130ed2c4f444a9ad 515 PRINTS PR00175 Sodium/alanine symporter signature 304 322 2.2E-57 T 09-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BV404_RS10825 b72d94770f237a0d130ed2c4f444a9ad 515 PRINTS PR00175 Sodium/alanine symporter signature 86 108 2.2E-57 T 09-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BV404_RS10825 b72d94770f237a0d130ed2c4f444a9ad 515 PRINTS PR00175 Sodium/alanine symporter signature 217 236 2.2E-57 T 09-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BV404_RS10825 b72d94770f237a0d130ed2c4f444a9ad 515 PRINTS PR00175 Sodium/alanine symporter signature 365 387 2.2E-57 T 09-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BV404_RS10825 b72d94770f237a0d130ed2c4f444a9ad 515 PRINTS PR00175 Sodium/alanine symporter signature 428 448 2.2E-57 T 09-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BV404_RS10825 b72d94770f237a0d130ed2c4f444a9ad 515 PRINTS PR00175 Sodium/alanine symporter signature 189 207 2.2E-57 T 09-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BV404_RS10825 b72d94770f237a0d130ed2c4f444a9ad 515 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 86 101 - T 09-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BV404_RS10825 b72d94770f237a0d130ed2c4f444a9ad 515 Pfam PF01235 Sodium:alanine symporter family 51 473 5.3E-148 T 09-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BV404_RS04215 06159386164d828010160726d14c44f5 1008 Pfam PF00575 S1 RNA binding domain 34 115 4.8E-14 T 09-03-2017 IPR003029 S1 domain GO:0003676 BV404_RS04215 06159386164d828010160726d14c44f5 1008 SUPERFAMILY SSF50249 37 121 2.89E-19 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS04215 06159386164d828010160726d14c44f5 1008 SMART SM00316 34 116 9.4E-11 T 09-03-2017 IPR022967 RNA-binding domain, S1 BV404_RS04215 06159386164d828010160726d14c44f5 1008 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 10 421 3.6E-170 T 09-03-2017 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 BV404_RS04215 06159386164d828010160726d14c44f5 1008 Hamap MF_00970 Ribonuclease E [rne]. 1 996 35.241 T 09-03-2017 IPR028878 Ribonuclease E GO:0006396|GO:0008995 BV404_RS04215 06159386164d828010160726d14c44f5 1008 Pfam PF10150 Ribonuclease E/G family 118 387 8.0E-94 T 09-03-2017 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 BV404_RS04215 06159386164d828010160726d14c44f5 1008 Gene3D G3DSA:2.40.50.140 28 121 4.2E-34 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS06235 b034ea59483e4b04202a6df060f6c235 448 Gene3D G3DSA:3.30.565.10 305 443 2.8E-24 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS06235 b034ea59483e4b04202a6df060f6c235 448 SMART SM00387 340 447 4.5E-15 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS06235 b034ea59483e4b04202a6df060f6c235 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 390 1.5E-6 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS06235 b034ea59483e4b04202a6df060f6c235 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 425 1.5E-6 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BV404_RS06235 b034ea59483e4b04202a6df060f6c235 448 Gene3D G3DSA:1.10.287.130 234 281 3.6E-5 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS06235 b034ea59483e4b04202a6df060f6c235 448 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 342 445 1.4E-10 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS06235 b034ea59483e4b04202a6df060f6c235 448 SUPERFAMILY SSF55874 306 443 1.7E-22 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain BV404_RS06235 b034ea59483e4b04202a6df060f6c235 448 SUPERFAMILY SSF47384 233 282 7.85E-6 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BV404_RS14745 58938bb9c3d757055e3eb8e3010508a9 408 SUPERFAMILY SSF103473 13 402 6.41E-32 T 09-03-2017 IPR020846 Major facilitator superfamily domain BV404_RS14745 58938bb9c3d757055e3eb8e3010508a9 408 Gene3D G3DSA:1.20.1250.20 220 401 2.1E-10 T 09-03-2017 BV404_RS14745 58938bb9c3d757055e3eb8e3010508a9 408 Gene3D G3DSA:1.20.1250.20 14 200 8.6E-14 T 09-03-2017 BV404_RS14745 58938bb9c3d757055e3eb8e3010508a9 408 Pfam PF07690 Major Facilitator Superfamily 21 279 1.2E-13 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BV404_RS00925 3de275ff193b364b2bf8fcd8ecd9050f 246 Gene3D G3DSA:3.40.1280.10 91 244 7.8E-56 T 09-03-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BV404_RS00925 3de275ff193b364b2bf8fcd8ecd9050f 246 Pfam PF00588 SpoU rRNA Methylase family 97 237 2.6E-39 T 09-03-2017 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 BV404_RS00925 3de275ff193b364b2bf8fcd8ecd9050f 246 SUPERFAMILY SSF75217 69 244 5.49E-48 T 09-03-2017 IPR029028 Alpha/beta knot methyltransferases BV404_RS00925 3de275ff193b364b2bf8fcd8ecd9050f 246 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 79 2.2E-20 T 09-03-2017 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 BV404_RS00925 3de275ff193b364b2bf8fcd8ecd9050f 246 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 243 2.7E-88 T 09-03-2017 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 BV404_RS00925 3de275ff193b364b2bf8fcd8ecd9050f 246 SMART SM00967 5 81 1.1E-20 T 09-03-2017 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 BV404_RS00925 3de275ff193b364b2bf8fcd8ecd9050f 246 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 3 244 43.774 T 09-03-2017 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB BV404_RS00925 3de275ff193b364b2bf8fcd8ecd9050f 246 Gene3D G3DSA:3.30.1330.30 2 77 3.8E-25 T 09-03-2017 IPR029064 50S ribosomal protein L30e-like BV404_RS00925 3de275ff193b364b2bf8fcd8ecd9050f 246 SUPERFAMILY SSF55315 3 77 3.65E-20 T 09-03-2017 IPR029064 50S ribosomal protein L30e-like BV404_RS03765 c953f7df43190510b3718b6bbde0ffae 257 Pfam PF08907 Domain of unknown function (DUF1853) 38 216 1.8E-39 T 09-03-2017 IPR015003 Protein of unknown function DUF1853 BV404_RS12795 0cb9dc2a898635984e30aaa940269724 149 Pfam PF01475 Ferric uptake regulator family 20 138 5.9E-21 T 09-03-2017 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 BV404_RS12795 0cb9dc2a898635984e30aaa940269724 149 Gene3D G3DSA:1.10.10.10 11 82 1.6E-15 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS12795 0cb9dc2a898635984e30aaa940269724 149 SUPERFAMILY SSF46785 12 144 3.52E-35 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS05000 22f21ef12a6881eb49573a5690f51d71 367 Pfam PF03916 Polysulphide reductase, NrfD 11 311 1.2E-17 T 09-03-2017 IPR005614 NrfD family BV404_RS13575 fd2771879f91e9b41b8c5a22d8ffa517 364 Gene3D G3DSA:3.40.50.2000 156 338 1.4E-28 T 09-03-2017 BV404_RS13575 fd2771879f91e9b41b8c5a22d8ffa517 364 Pfam PF13439 Glycosyltransferase Family 4 25 167 1.9E-12 T 09-03-2017 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 BV404_RS13575 fd2771879f91e9b41b8c5a22d8ffa517 364 SUPERFAMILY SSF53756 23 362 6.28E-69 T 09-03-2017 BV404_RS13575 fd2771879f91e9b41b8c5a22d8ffa517 364 Pfam PF00534 Glycosyl transferases group 1 179 339 1.0E-33 T 09-03-2017 IPR001296 Glycosyl transferase, family 1 BV404_RS01325 3d0d36f61ebd7c41f4799ef548d41a87 84 SUPERFAMILY SSF82657 4 82 1.06E-27 T 09-03-2017 IPR002634 BolA protein BV404_RS01325 3d0d36f61ebd7c41f4799ef548d41a87 84 Gene3D G3DSA:3.30.300.90 3 80 9.2E-27 T 09-03-2017 IPR002634 BolA protein BV404_RS01325 3d0d36f61ebd7c41f4799ef548d41a87 84 PIRSF PIRSF003113 1 83 3.3E-22 T 09-03-2017 IPR002634 BolA protein BV404_RS01325 3d0d36f61ebd7c41f4799ef548d41a87 84 Pfam PF01722 BolA-like protein 20 74 1.6E-13 T 09-03-2017 IPR002634 BolA protein BV404_RS12150 26ed20fadfe8f86a22d319c03f4b903d 584 SMART SM00563 75 199 1.2E-6 T 09-03-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 BV404_RS12150 26ed20fadfe8f86a22d319c03f4b903d 584 Pfam PF13444 Acetyltransferase (GNAT) domain 331 432 3.9E-21 T 09-03-2017 BV404_RS12150 26ed20fadfe8f86a22d319c03f4b903d 584 SUPERFAMILY SSF55729 313 454 6.89E-24 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS12150 26ed20fadfe8f86a22d319c03f4b903d 584 Pfam PF01553 Acyltransferase 68 195 3.5E-6 T 09-03-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 BV404_RS12150 26ed20fadfe8f86a22d319c03f4b903d 584 Gene3D G3DSA:3.40.630.30 346 455 5.2E-6 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS12150 26ed20fadfe8f86a22d319c03f4b903d 584 SUPERFAMILY SSF69593 53 205 5.36E-8 T 09-03-2017 BV404_RS05105 f8010a0a967cf13214ec95791897339d 261 TIGRFAM TIGR04316 dhbA_paeA: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 10 260 2.9E-113 T 09-03-2017 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 BV404_RS05105 f8010a0a967cf13214ec95791897339d 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 172 195 2.6E-56 T 09-03-2017 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 BV404_RS05105 f8010a0a967cf13214ec95791897339d 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 107 127 2.6E-56 T 09-03-2017 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 BV404_RS05105 f8010a0a967cf13214ec95791897339d 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 14 31 2.6E-56 T 09-03-2017 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 BV404_RS05105 f8010a0a967cf13214ec95791897339d 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 237 256 2.6E-56 T 09-03-2017 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 BV404_RS05105 f8010a0a967cf13214ec95791897339d 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 211 230 2.6E-56 T 09-03-2017 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 BV404_RS05105 f8010a0a967cf13214ec95791897339d 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 87 104 2.6E-56 T 09-03-2017 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 BV404_RS05105 f8010a0a967cf13214ec95791897339d 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BV404_RS05105 f8010a0a967cf13214ec95791897339d 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 258 4.5E-52 T 09-03-2017 BV404_RS05105 f8010a0a967cf13214ec95791897339d 261 SUPERFAMILY SSF51735 8 259 1.36E-67 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS05105 f8010a0a967cf13214ec95791897339d 261 Gene3D G3DSA:3.40.50.720 2 259 1.6E-70 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS06075 fbed433ae6193df14c59e4af38a746dd 310 SUPERFAMILY SSF53335 16 288 2.66E-52 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS06075 fbed433ae6193df14c59e4af38a746dd 310 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 25 310 3.8E-160 T 09-03-2017 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 BV404_RS06075 fbed433ae6193df14c59e4af38a746dd 310 Gene3D G3DSA:3.40.50.150 46 309 6.5E-56 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS13970 4f3d3fc17cdc76a6ae1e9f5d19c8096a 372 Gene3D G3DSA:3.10.350.10 41 90 1.1E-8 T 09-03-2017 IPR018392 LysM domain BV404_RS13970 4f3d3fc17cdc76a6ae1e9f5d19c8096a 372 Pfam PF01476 LysM domain 44 89 1.8E-11 T 09-03-2017 IPR018392 LysM domain BV404_RS13970 4f3d3fc17cdc76a6ae1e9f5d19c8096a 372 SMART SM00257 43 91 2.1E-7 T 09-03-2017 IPR018392 LysM domain BV404_RS13970 4f3d3fc17cdc76a6ae1e9f5d19c8096a 372 SUPERFAMILY SSF54106 42 90 2.35E-7 T 09-03-2017 IPR018392 LysM domain BV404_RS11335 3b2b8db1ee16a977b56098b76d59a419 245 Gene3D G3DSA:1.10.10.60 194 242 2.0E-15 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS11335 3b2b8db1ee16a977b56098b76d59a419 245 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 194 237 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BV404_RS11335 3b2b8db1ee16a977b56098b76d59a419 245 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 210 225 5.2E-6 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BV404_RS11335 3b2b8db1ee16a977b56098b76d59a419 245 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 225 241 5.2E-6 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BV404_RS11335 3b2b8db1ee16a977b56098b76d59a419 245 SUPERFAMILY SSF46689 194 242 4.93E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS11335 3b2b8db1ee16a977b56098b76d59a419 245 SUPERFAMILY SSF46689 143 190 2.15E-8 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS11335 3b2b8db1ee16a977b56098b76d59a419 245 Gene3D G3DSA:1.10.10.60 139 193 3.2E-15 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS11335 3b2b8db1ee16a977b56098b76d59a419 245 Pfam PF12833 Helix-turn-helix domain 163 242 8.0E-21 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BV404_RS11335 3b2b8db1ee16a977b56098b76d59a419 245 SMART SM00342 157 241 7.7E-29 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BV404_RS04425 6f0cefac117b05194a30bf52905596c5 404 Gene3D G3DSA:3.40.640.10 51 279 3.1E-66 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 BV404_RS04425 6f0cefac117b05194a30bf52905596c5 404 Pfam PF00155 Aminotransferase class I and II 61 392 8.0E-48 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BV404_RS04425 6f0cefac117b05194a30bf52905596c5 404 SUPERFAMILY SSF53383 5 400 1.25E-93 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase BV404_RS04425 6f0cefac117b05194a30bf52905596c5 404 Gene3D G3DSA:3.90.1150.10 280 403 4.6E-41 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 BV404_RS01270 308a21b0ab3a59c2ac9dfaba9f76d265 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS01270 308a21b0ab3a59c2ac9dfaba9f76d265 241 Gene3D G3DSA:3.40.50.300 3 235 1.9E-69 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS01270 308a21b0ab3a59c2ac9dfaba9f76d265 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 214 236 6.3E-10 T 09-03-2017 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal BV404_RS01270 308a21b0ab3a59c2ac9dfaba9f76d265 241 SMART SM00382 28 202 4.9E-8 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS01270 308a21b0ab3a59c2ac9dfaba9f76d265 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 241 8.3E-127 T 09-03-2017 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 BV404_RS01270 308a21b0ab3a59c2ac9dfaba9f76d265 241 Pfam PF00005 ABC transporter 20 166 4.8E-34 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS01270 308a21b0ab3a59c2ac9dfaba9f76d265 241 SUPERFAMILY SSF52540 3 237 2.15E-64 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS21585 29ebcbc53f59a68d1a196fc2a54ad8ae 393 Gene3D G3DSA:3.30.499.10 2 92 1.5E-28 T 09-03-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 BV404_RS21585 29ebcbc53f59a68d1a196fc2a54ad8ae 393 SUPERFAMILY SSF52016 144 393 3.53E-67 T 09-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel BV404_RS21585 29ebcbc53f59a68d1a196fc2a54ad8ae 393 Pfam PF00694 Aconitase C-terminal domain 202 333 1.5E-31 T 09-03-2017 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 BV404_RS21585 29ebcbc53f59a68d1a196fc2a54ad8ae 393 SUPERFAMILY SSF53732 2 139 6.02E-44 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 BV404_RS21585 29ebcbc53f59a68d1a196fc2a54ad8ae 393 Pfam PF00330 Aconitase family (aconitate hydratase) 2 79 4.3E-20 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 BV404_RS21585 29ebcbc53f59a68d1a196fc2a54ad8ae 393 Gene3D G3DSA:3.20.19.10 151 393 2.3E-62 T 09-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel BV404_RS07605 c98e60d987b297586f72a833a8be7de7 222 Gene3D G3DSA:3.20.20.70 28 121 4.6E-7 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS07605 c98e60d987b297586f72a833a8be7de7 222 PIRSF PIRSF000370 1 222 3.3E-68 T 09-03-2017 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 BV404_RS07605 c98e60d987b297586f72a833a8be7de7 222 SUPERFAMILY SSF102114 27 194 1.16E-7 T 09-03-2017 BV404_RS07605 c98e60d987b297586f72a833a8be7de7 222 Pfam PF13394 4Fe-4S single cluster domain 23 135 2.0E-11 T 09-03-2017 BV404_RS07605 c98e60d987b297586f72a833a8be7de7 222 Pfam PF04055 Radical SAM superfamily 26 123 7.3E-7 T 09-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 BV404_RS07605 c98e60d987b297586f72a833a8be7de7 222 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 8 221 2.0E-111 T 09-03-2017 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 BV404_RS07605 c98e60d987b297586f72a833a8be7de7 222 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 2 222 35.331 T 09-03-2017 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 BV404_RS13360 15f76b7a7914c677741cee981b37d3b4 201 Gene3D G3DSA:1.20.1590.10 8 201 1.4E-83 T 09-03-2017 IPR023381 YP001051499.1-like domain BV404_RS13360 15f76b7a7914c677741cee981b37d3b4 201 Pfam PF04222 Protein of unknown function (DUF416) 12 200 9.3E-78 T 09-03-2017 IPR007338 Protein of unknown function DUF416 BV404_RS03690 36168bcf1654c3c51d400df385d8e9b2 174 Gene3D G3DSA:3.40.50.360 1 174 1.1E-32 T 09-03-2017 IPR029039 Flavoprotein-like domain BV404_RS03690 36168bcf1654c3c51d400df385d8e9b2 174 Pfam PF03358 NADPH-dependent FMN reductase 1 127 6.2E-25 T 09-03-2017 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 BV404_RS03690 36168bcf1654c3c51d400df385d8e9b2 174 SUPERFAMILY SSF52218 1 173 3.55E-34 T 09-03-2017 IPR029039 Flavoprotein-like domain BV404_RS02545 1669801ab3e1245828a11862cf8fa12e 782 Pfam PF00990 Diguanylate cyclase, GGDEF domain 339 503 2.4E-41 T 09-03-2017 IPR000160 GGDEF domain BV404_RS02545 1669801ab3e1245828a11862cf8fa12e 782 Gene3D G3DSA:3.30.70.270 341 514 1.1E-46 T 09-03-2017 BV404_RS02545 1669801ab3e1245828a11862cf8fa12e 782 Pfam PF00563 EAL domain 531 755 1.5E-63 T 09-03-2017 IPR001633 EAL domain BV404_RS02545 1669801ab3e1245828a11862cf8fa12e 782 SMART SM00052 517 760 2.2E-73 T 09-03-2017 IPR001633 EAL domain BV404_RS02545 1669801ab3e1245828a11862cf8fa12e 782 SUPERFAMILY SSF55073 344 509 1.1E-39 T 09-03-2017 IPR029787 Nucleotide cyclase BV404_RS02545 1669801ab3e1245828a11862cf8fa12e 782 SUPERFAMILY SSF141868 523 770 9.42E-69 T 09-03-2017 IPR001633 EAL domain BV404_RS02545 1669801ab3e1245828a11862cf8fa12e 782 SMART SM00267 328 507 2.7E-50 T 09-03-2017 IPR000160 GGDEF domain BV404_RS02545 1669801ab3e1245828a11862cf8fa12e 782 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 338 505 1.4E-34 T 09-03-2017 IPR000160 GGDEF domain BV404_RS02545 1669801ab3e1245828a11862cf8fa12e 782 Gene3D G3DSA:3.20.20.450 521 767 6.5E-72 T 09-03-2017 IPR001633 EAL domain BV404_RS09275 809ed5adb491cf7371f19ca539bd08b1 509 SUPERFAMILY SSF55729 5 139 4.63E-17 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS09275 809ed5adb491cf7371f19ca539bd08b1 509 SUPERFAMILY SSF56317 222 491 5.23E-59 T 09-03-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 BV404_RS09275 809ed5adb491cf7371f19ca539bd08b1 509 Gene3D G3DSA:3.40.630.30 8 141 1.6E-18 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS09275 809ed5adb491cf7371f19ca539bd08b1 509 Pfam PF00583 Acetyltransferase (GNAT) family 56 138 9.5E-6 T 09-03-2017 IPR000182 GNAT domain GO:0008080 BV404_RS09275 809ed5adb491cf7371f19ca539bd08b1 509 Gene3D G3DSA:3.60.110.10 220 506 2.2E-60 T 09-03-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 BV404_RS09275 809ed5adb491cf7371f19ca539bd08b1 509 Pfam PF00795 Carbon-nitrogen hydrolase 226 485 6.7E-32 T 09-03-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 BV404_RS03785 ed0cc4a062a7aec233ae153b02804b03 114 SUPERFAMILY SSF81343 4 113 1.87E-24 T 09-03-2017 BV404_RS03785 ed0cc4a062a7aec233ae153b02804b03 114 Gene3D G3DSA:1.20.1300.10 1 113 4.5E-35 T 09-03-2017 BV404_RS03785 ed0cc4a062a7aec233ae153b02804b03 114 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 112 1.5E-32 T 09-03-2017 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 BV404_RS03785 ed0cc4a062a7aec233ae153b02804b03 114 PIRSF PIRSF000169 1 114 1.6E-36 T 09-03-2017 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 BV404_RS00255 546239fe8104f1d59dad7767a6aec798 403 Pfam PF12693 GspL periplasmic domain 244 402 7.9E-48 T 09-03-2017 IPR025691 GspL periplasmic domain BV404_RS00255 546239fe8104f1d59dad7767a6aec798 403 SUPERFAMILY SSF53067 146 237 9.58E-21 T 09-03-2017 BV404_RS00255 546239fe8104f1d59dad7767a6aec798 403 Pfam PF05134 Type II secretion system (T2SS), protein L 5 240 8.9E-70 T 09-03-2017 IPR024230 GspL, cytoplasmic actin-ATPase-like domain BV404_RS00255 546239fe8104f1d59dad7767a6aec798 403 SUPERFAMILY SSF53067 2 143 3.3E-41 T 09-03-2017 BV404_RS00255 546239fe8104f1d59dad7767a6aec798 403 PIRSF PIRSF015761 4 401 9.5E-35 T 09-03-2017 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 BV404_RS00255 546239fe8104f1d59dad7767a6aec798 403 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 5 400 1.9E-102 T 09-03-2017 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 BV404_RS06965 916a54e958ab0d8f569607f927f754dc 245 Pfam PF03942 DTW domain 30 215 4.6E-40 T 09-03-2017 IPR005636 DTW BV404_RS06965 916a54e958ab0d8f569607f927f754dc 245 SMART SM01144 27 221 2.4E-62 T 09-03-2017 IPR005636 DTW BV404_RS18005 b56bfd05a91e6077e9b6d482470bbe79 245 Gene3D G3DSA:3.40.720.10 131 245 8.8E-8 T 09-03-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 BV404_RS18005 b56bfd05a91e6077e9b6d482470bbe79 245 Pfam PF00884 Sulfatase 18 243 1.0E-36 T 09-03-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 BV404_RS18005 b56bfd05a91e6077e9b6d482470bbe79 245 SUPERFAMILY SSF53649 19 244 5.67E-14 T 09-03-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 BV404_RS11385 6202d2c6d50d9c3f4aaf1f37462aad86 201 Pfam PF10144 Bacterial virulence factor haemolysin 7 152 4.7E-39 T 09-03-2017 IPR019305 Uncharacterised protein family Smp BV404_RS01065 ce33e3797318e45280fde094b380d2c4 128 Gene3D G3DSA:3.90.1030.10 1 117 1.4E-51 T 09-03-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS01065 ce33e3797318e45280fde094b380d2c4 128 Pfam PF01196 Ribosomal protein L17 20 116 6.8E-35 T 09-03-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS01065 ce33e3797318e45280fde094b380d2c4 128 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 1.4E-49 T 09-03-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS01065 ce33e3797318e45280fde094b380d2c4 128 SUPERFAMILY SSF64263 1 119 3.4E-51 T 09-03-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS01065 ce33e3797318e45280fde094b380d2c4 128 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 09-03-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS01065 ce33e3797318e45280fde094b380d2c4 128 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.737 T 09-03-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BV404_RS05965 36a30461104b09c436d9e5f88fccb3ce 320 SUPERFAMILY SSF161098 177 298 3.27E-20 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS05965 36a30461104b09c436d9e5f88fccb3ce 320 SUPERFAMILY SSF161098 71 137 3.27E-20 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS05965 36a30461104b09c436d9e5f88fccb3ce 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 314 3.9E-43 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS05965 36a30461104b09c436d9e5f88fccb3ce 320 Gene3D G3DSA:1.10.3720.10 72 137 6.6E-18 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS05965 36a30461104b09c436d9e5f88fccb3ce 320 Gene3D G3DSA:1.10.3720.10 177 306 6.6E-18 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 BV404_RS15440 257d03c3acc175668dcfcabd60799358 94 SUPERFAMILY SSF56655 2 93 3.66E-34 T 09-03-2017 BV404_RS15440 257d03c3acc175668dcfcabd60799358 94 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 2 94 1.1E-40 T 09-03-2017 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 BV404_RS15440 257d03c3acc175668dcfcabd60799358 94 Gene3D G3DSA:3.30.540.10 1 94 6.4E-39 T 09-03-2017 BV404_RS11600 74ea35a2371e665dca92900e7b43414e 259 Pfam PF01925 Sulfite exporter TauE/SafE 12 246 6.6E-42 T 09-03-2017 IPR002781 Transmembrane protein TauE-like GO:0016021 BV404_RS09835 5f5cf2c027151061ef8dd4054241d3c1 294 Pfam PF00691 OmpA family 191 283 4.4E-18 T 09-03-2017 IPR006665 OmpA-like domain BV404_RS09835 5f5cf2c027151061ef8dd4054241d3c1 294 ProSitePatterns PS01068 OmpA-like domain. 221 265 - T 09-03-2017 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 BV404_RS09835 5f5cf2c027151061ef8dd4054241d3c1 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 148 167 2.7E-136 T 09-03-2017 BV404_RS09835 5f5cf2c027151061ef8dd4054241d3c1 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 252 271 2.7E-136 T 09-03-2017 BV404_RS09835 5f5cf2c027151061ef8dd4054241d3c1 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 104 121 2.7E-136 T 09-03-2017 BV404_RS09835 5f5cf2c027151061ef8dd4054241d3c1 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 45 63 2.7E-136 T 09-03-2017 BV404_RS09835 5f5cf2c027151061ef8dd4054241d3c1 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 85 103 2.7E-136 T 09-03-2017 BV404_RS09835 5f5cf2c027151061ef8dd4054241d3c1 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 28 44 2.7E-136 T 09-03-2017 BV404_RS09835 5f5cf2c027151061ef8dd4054241d3c1 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 66 84 2.7E-136 T 09-03-2017 BV404_RS09835 5f5cf2c027151061ef8dd4054241d3c1 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 205 231 2.7E-136 T 09-03-2017 BV404_RS09835 5f5cf2c027151061ef8dd4054241d3c1 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 272 292 2.7E-136 T 09-03-2017 BV404_RS09835 5f5cf2c027151061ef8dd4054241d3c1 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 3 27 2.7E-136 T 09-03-2017 BV404_RS09835 5f5cf2c027151061ef8dd4054241d3c1 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 123 145 2.7E-136 T 09-03-2017 BV404_RS09835 5f5cf2c027151061ef8dd4054241d3c1 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 234 251 2.7E-136 T 09-03-2017 BV404_RS09835 5f5cf2c027151061ef8dd4054241d3c1 294 Gene3D G3DSA:3.30.1330.60 191 289 3.5E-25 T 09-03-2017 IPR006665 OmpA-like domain BV404_RS09835 5f5cf2c027151061ef8dd4054241d3c1 294 SUPERFAMILY SSF103088 160 288 3.79E-24 T 09-03-2017 IPR006665 OmpA-like domain BV404_RS11985 1f1f9f69597108bcecc7da1ca0e9ab76 93 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 35.972 T 09-03-2017 IPR023081 Cell division protein FtsB BV404_RS11985 1f1f9f69597108bcecc7da1ca0e9ab76 93 Pfam PF04977 Septum formation initiator 11 89 4.0E-26 T 09-03-2017 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 BV404_RS00140 a394bb8d929dd09979fa38bcf3f121a2 176 Pfam PF13511 Domain of unknown function (DUF4124) 20 61 3.7E-8 T 09-03-2017 IPR025392 Domain of unknown function DUF4124 BV404_RS10360 5f2e0c9c997791531ea2a85d95292d4f 387 Pfam PF12167 Domain of unknown function (DUF3596) 1 65 5.3E-20 T 09-03-2017 IPR022000 Domain of unknown function (DUF3596) BV404_RS10360 5f2e0c9c997791531ea2a85d95292d4f 387 Gene3D G3DSA:1.10.150.130 86 147 1.8E-5 T 09-03-2017 IPR023109 Integrase/recombinase, N-terminal BV404_RS10360 5f2e0c9c997791531ea2a85d95292d4f 387 Pfam PF00589 Phage integrase family 199 363 4.3E-12 T 09-03-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BV404_RS10360 5f2e0c9c997791531ea2a85d95292d4f 387 SUPERFAMILY SSF56349 85 365 5.0E-45 T 09-03-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BV404_RS10360 5f2e0c9c997791531ea2a85d95292d4f 387 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 86 139 4.2E-6 T 09-03-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 BV404_RS10360 5f2e0c9c997791531ea2a85d95292d4f 387 Gene3D G3DSA:1.10.443.10 197 365 4.1E-26 T 09-03-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 BV404_RS14465 844c6b8e1721e11fe4f9bd67aca4ccb2 294 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 274 8.1E-72 T 09-03-2017 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 BV404_RS14465 844c6b8e1721e11fe4f9bd67aca4ccb2 294 Pfam PF00892 EamA-like transporter family 141 271 1.3E-6 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 BV404_RS14465 844c6b8e1721e11fe4f9bd67aca4ccb2 294 SUPERFAMILY SSF103481 184 274 2.62E-5 T 09-03-2017 BV404_RS14465 844c6b8e1721e11fe4f9bd67aca4ccb2 294 SUPERFAMILY SSF103481 35 131 1.1E-5 T 09-03-2017 BV404_RS12670 612566ca2de50cbfbf53449240dc7313 592 Pfam PF04932 O-Antigen ligase 222 366 4.0E-13 T 09-03-2017 IPR007016 O-antigen ligase-related BV404_RS12670 612566ca2de50cbfbf53449240dc7313 592 Pfam PF15864 Protein glycosylation ligase 174 199 2.1E-11 T 09-03-2017 IPR031726 Protein glycosylation ligase domain BV404_RS12670 612566ca2de50cbfbf53449240dc7313 592 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 388 577 1.2E-64 T 09-03-2017 IPR021797 Virulence factor membrane-bound polymerase, C-terminal BV404_RS12825 a2638277cf0c7745afe9885a667e8571 255 Pfam PF04338 Protein of unknown function, DUF481 40 255 1.2E-49 T 09-03-2017 IPR007433 Protein of unknown function DUF481 BV404_RS05830 d33008a43a1810b0fc5e8323e95a0014 321 Gene3D G3DSA:3.30.1490.20 71 102 3.8E-4 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 BV404_RS05830 d33008a43a1810b0fc5e8323e95a0014 321 SUPERFAMILY SSF56059 49 205 2.8E-20 T 09-03-2017 BV404_RS05830 d33008a43a1810b0fc5e8323e95a0014 321 SUPERFAMILY SSF56059 235 283 2.8E-20 T 09-03-2017 BV404_RS05830 d33008a43a1810b0fc5e8323e95a0014 321 TIGRFAM TIGR02291 rimK_rel_E_lig: alpha-L-glutamate ligase homolog 8 320 3.3E-168 T 09-03-2017 IPR011758 Alpha-L-glutamate ligase-related protein BV404_RS05830 d33008a43a1810b0fc5e8323e95a0014 321 Pfam PF14397 Sugar-transfer associated ATP-grasp 24 297 2.5E-115 T 09-03-2017 BV404_RS05830 d33008a43a1810b0fc5e8323e95a0014 321 Gene3D G3DSA:3.30.470.20 165 206 3.9E-4 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 BV404_RS05830 d33008a43a1810b0fc5e8323e95a0014 321 Gene3D G3DSA:3.30.470.20 232 288 1.7E-5 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 BV404_RS03375 dc1e1e6c6b9f2c08293067e8adb505da 127 Pfam PF04247 Invasion gene expression up-regulator, SirB 2 123 4.7E-39 T 09-03-2017 IPR007360 Invasion gene expression up-regulator, SirB BV404_RS03375 dc1e1e6c6b9f2c08293067e8adb505da 127 PIRSF PIRSF005610 1 121 2.5E-18 T 09-03-2017 IPR007360 Invasion gene expression up-regulator, SirB BV404_RS11015 005982e82f8cfecaf077e4a55fd55444 436 SUPERFAMILY SSF51621 6 436 3.23E-154 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 BV404_RS11015 005982e82f8cfecaf077e4a55fd55444 436 ProSitePatterns PS00161 Isocitrate lyase signature. 195 200 - T 09-03-2017 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 BV404_RS11015 005982e82f8cfecaf077e4a55fd55444 436 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 10 257 2.0E-114 T 09-03-2017 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 BV404_RS11015 005982e82f8cfecaf077e4a55fd55444 436 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 258 436 7.8E-90 T 09-03-2017 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 BV404_RS11015 005982e82f8cfecaf077e4a55fd55444 436 PIRSF PIRSF001362 1 436 3.9E-225 T 09-03-2017 BV404_RS11015 005982e82f8cfecaf077e4a55fd55444 436 Gene3D G3DSA:3.20.20.60 7 419 1.9E-169 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 BV404_RS11015 005982e82f8cfecaf077e4a55fd55444 436 Pfam PF00463 Isocitrate lyase family 14 257 7.9E-63 T 09-03-2017 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 BV404_RS11015 005982e82f8cfecaf077e4a55fd55444 436 Pfam PF00463 Isocitrate lyase family 259 436 7.9E-53 T 09-03-2017 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 BV404_RS08415 abc08d2379940196336a6a27bd48c254 132 SUPERFAMILY SSF55021 3 66 6.18E-17 T 09-03-2017 BV404_RS08415 abc08d2379940196336a6a27bd48c254 132 Gene3D G3DSA:3.30.2130.10 1 131 1.5E-52 T 09-03-2017 BV404_RS08415 abc08d2379940196336a6a27bd48c254 132 Pfam PF10000 ACT domain 2 70 1.3E-24 T 09-03-2017 IPR018717 Domain of unknown function DUF2241 BV404_RS08415 abc08d2379940196336a6a27bd48c254 132 SUPERFAMILY SSF55021 70 130 1.72E-19 T 09-03-2017 BV404_RS08415 abc08d2379940196336a6a27bd48c254 132 Pfam PF13840 ACT domain 72 127 2.1E-12 T 09-03-2017 IPR027795 GATS-like ACT domain BV404_RS09960 a5f7123ca8967568abd88f15d50815c7 135 SMART SM00116 83 130 6.2E-6 T 09-03-2017 IPR000644 CBS domain BV404_RS09960 a5f7123ca8967568abd88f15d50815c7 135 SMART SM00116 16 65 27.0 T 09-03-2017 IPR000644 CBS domain BV404_RS09960 a5f7123ca8967568abd88f15d50815c7 135 SUPERFAMILY SSF54631 5 126 3.66E-24 T 09-03-2017 BV404_RS09960 a5f7123ca8967568abd88f15d50815c7 135 Gene3D G3DSA:3.10.580.10 8 126 8.8E-24 T 09-03-2017 BV404_RS09960 a5f7123ca8967568abd88f15d50815c7 135 Pfam PF00571 CBS domain 78 125 4.0E-10 T 09-03-2017 IPR000644 CBS domain BV404_RS10125 e763f2184ac5138b8922424d6e3abc52 373 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 20 367 6.2E-136 T 09-03-2017 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 BV404_RS10125 e763f2184ac5138b8922424d6e3abc52 373 Pfam PF01098 Cell cycle protein 25 367 4.2E-112 T 09-03-2017 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 BV404_RS10125 e763f2184ac5138b8922424d6e3abc52 373 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 324 348 - T 09-03-2017 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 BV404_RS14580 af2cabf2db566850723c53c97d416a5f 347 SMART SM01004 9 333 2.6E-243 T 09-03-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BV404_RS14580 af2cabf2db566850723c53c97d416a5f 347 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 09-03-2017 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BV404_RS14580 af2cabf2db566850723c53c97d416a5f 347 SUPERFAMILY SSF51569 7 335 6.59E-144 T 09-03-2017 BV404_RS14580 af2cabf2db566850723c53c97d416a5f 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 4.1E-57 T 09-03-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BV404_RS14580 af2cabf2db566850723c53c97d416a5f 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 4.1E-57 T 09-03-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BV404_RS14580 af2cabf2db566850723c53c97d416a5f 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 4.1E-57 T 09-03-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BV404_RS14580 af2cabf2db566850723c53c97d416a5f 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 4.1E-57 T 09-03-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BV404_RS14580 af2cabf2db566850723c53c97d416a5f 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 4.1E-57 T 09-03-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BV404_RS14580 af2cabf2db566850723c53c97d416a5f 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 4.1E-57 T 09-03-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BV404_RS14580 af2cabf2db566850723c53c97d416a5f 347 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 332 9.6E-141 T 09-03-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BV404_RS14580 af2cabf2db566850723c53c97d416a5f 347 PIRSF PIRSF001415 2 336 8.1E-151 T 09-03-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BV404_RS14580 af2cabf2db566850723c53c97d416a5f 347 Gene3D G3DSA:3.20.20.70 7 336 2.4E-153 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS02580 e84c6fd8140a1608e40286eacce2570e 244 Gene3D G3DSA:3.60.140.10 2 243 9.2E-94 T 09-03-2017 IPR003730 Multi-copper polyphenol oxidoreductase, laccase BV404_RS02580 e84c6fd8140a1608e40286eacce2570e 244 SUPERFAMILY SSF64438 2 242 1.34E-83 T 09-03-2017 IPR011324 Cytotoxic necrotizing factor-like, catalytic BV404_RS02580 e84c6fd8140a1608e40286eacce2570e 244 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 25 241 2.1E-62 T 09-03-2017 IPR003730 Multi-copper polyphenol oxidoreductase, laccase BV404_RS02580 e84c6fd8140a1608e40286eacce2570e 244 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 19 240 1.6E-71 T 09-03-2017 IPR003730 Multi-copper polyphenol oxidoreductase, laccase BV404_RS00210 35ddedaad4a5a10ce40a00b1f4a2e52b 295 SUPERFAMILY SSF50156 203 294 2.29E-16 T 09-03-2017 IPR001478 PDZ domain GO:0005515 BV404_RS00210 35ddedaad4a5a10ce40a00b1f4a2e52b 295 Pfam PF11356 Type II secretion system protein C 32 168 7.5E-44 T 09-03-2017 IPR024961 Type II secretion system protein C, N-terminal BV404_RS00210 35ddedaad4a5a10ce40a00b1f4a2e52b 295 Gene3D G3DSA:2.30.42.10 239 292 7.6E-6 T 09-03-2017 IPR001478 PDZ domain GO:0005515 BV404_RS00210 35ddedaad4a5a10ce40a00b1f4a2e52b 295 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 29 295 7.5E-84 T 09-03-2017 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 BV404_RS12475 051bd5165f0f9820d3892caae5254510 468 Pfam PF13520 Amino acid permease 5 436 1.5E-73 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 BV404_RS12475 051bd5165f0f9820d3892caae5254510 468 PIRSF PIRSF006060 1 467 3.4E-50 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 BV404_RS12475 051bd5165f0f9820d3892caae5254510 468 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 3 467 7.9E-164 T 09-03-2017 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 BV404_RS09945 e2d54bf9c2df830836896e28b5435d74 173 ProDom PD016359 TRANSMEMBRANE TOXS REGULATORY MEMBRANE PERIPLASMIC 1 172 5.0E-65 T 09-03-2017 BV404_RS14190 e9135ae30fb7e28df786ef18edae79fa 210 Pfam PF02527 rRNA small subunit methyltransferase G 23 204 5.7E-61 T 09-03-2017 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 BV404_RS14190 e9135ae30fb7e28df786ef18edae79fa 210 PIRSF PIRSF003078 1 209 1.9E-59 T 09-03-2017 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 BV404_RS14190 e9135ae30fb7e28df786ef18edae79fa 210 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 16 205 27.989 T 09-03-2017 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 BV404_RS14190 e9135ae30fb7e28df786ef18edae79fa 210 SUPERFAMILY SSF53335 8 209 1.04E-36 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS14190 e9135ae30fb7e28df786ef18edae79fa 210 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 29 207 4.5E-56 T 09-03-2017 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 BV404_RS14190 e9135ae30fb7e28df786ef18edae79fa 210 Gene3D G3DSA:3.40.50.150 8 208 5.3E-67 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS06290 8df12a22486d464832705e4f6ba5c1f0 376 Pfam PF17186 Lipocalin-like domain 253 376 4.5E-33 T 09-03-2017 IPR033451 AttH, lipocalin-like domain BV404_RS06290 8df12a22486d464832705e4f6ba5c1f0 376 SUPERFAMILY SSF159245 56 376 7.32E-95 T 09-03-2017 BV404_RS06290 8df12a22486d464832705e4f6ba5c1f0 376 Pfam PF07143 CrtC N-terminal lipocalin domain 79 250 6.7E-45 T 09-03-2017 IPR010791 AttH domain BV404_RS06290 8df12a22486d464832705e4f6ba5c1f0 376 Gene3D G3DSA:2.40.370.10 67 252 2.5E-58 T 09-03-2017 IPR023374 AttH-like domain BV404_RS06290 8df12a22486d464832705e4f6ba5c1f0 376 Gene3D G3DSA:2.40.370.10 255 376 3.4E-35 T 09-03-2017 IPR023374 AttH-like domain BV404_RS08345 adc81fe2a06feed714b90fac55826216 127 Gene3D G3DSA:3.30.70.260 70 107 2.7E-4 T 09-03-2017 BV404_RS08345 adc81fe2a06feed714b90fac55826216 127 SUPERFAMILY SSF55021 4 67 1.68E-5 T 09-03-2017 BV404_RS06050 462cfb5e97993e1e792bbaf357de3b1a 444 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 307 326 2.5E-8 T 09-03-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BV404_RS06050 462cfb5e97993e1e792bbaf357de3b1a 444 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 14 35 2.5E-8 T 09-03-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BV404_RS06050 462cfb5e97993e1e792bbaf357de3b1a 444 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 43 62 2.5E-8 T 09-03-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BV404_RS06050 462cfb5e97993e1e792bbaf357de3b1a 444 Pfam PF00209 Sodium:neurotransmitter symporter family 6 126 2.3E-20 T 09-03-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BV404_RS06050 462cfb5e97993e1e792bbaf357de3b1a 444 Pfam PF00209 Sodium:neurotransmitter symporter family 144 442 1.3E-26 T 09-03-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BV404_RS06050 462cfb5e97993e1e792bbaf357de3b1a 444 SUPERFAMILY SSF161070 6 443 1.44E-118 T 09-03-2017 BV404_RS14600 24ec4bbe7bb7a17b2365a30e4fdb1ef3 205 Gene3D G3DSA:1.10.1130.10 124 135 4.7E-4 T 09-03-2017 IPR012286 Tetrahaem cytochrome domain BV404_RS14600 24ec4bbe7bb7a17b2365a30e4fdb1ef3 205 Gene3D G3DSA:1.10.1130.10 23 33 4.7E-4 T 09-03-2017 IPR012286 Tetrahaem cytochrome domain BV404_RS14600 24ec4bbe7bb7a17b2365a30e4fdb1ef3 205 SUPERFAMILY SSF46626 6 105 2.15E-21 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 BV404_RS14600 24ec4bbe7bb7a17b2365a30e4fdb1ef3 205 Pfam PF00034 Cytochrome c 25 104 1.5E-10 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 BV404_RS14600 24ec4bbe7bb7a17b2365a30e4fdb1ef3 205 Pfam PF00034 Cytochrome c 116 201 6.3E-9 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 BV404_RS14600 24ec4bbe7bb7a17b2365a30e4fdb1ef3 205 Gene3D G3DSA:1.10.760.10 136 205 2.2E-26 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 BV404_RS14600 24ec4bbe7bb7a17b2365a30e4fdb1ef3 205 Gene3D G3DSA:1.10.760.10 34 105 3.2E-28 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 BV404_RS14600 24ec4bbe7bb7a17b2365a30e4fdb1ef3 205 PIRSF PIRSF000005 1 205 2.4E-64 T 09-03-2017 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 BV404_RS14600 24ec4bbe7bb7a17b2365a30e4fdb1ef3 205 SUPERFAMILY SSF46626 114 203 5.79E-20 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 BV404_RS10255 cdf670efd83d616367ce217b73bcd9d2 326 Pfam PF03612 Sorbitol phosphotransferase enzyme II N-terminus 5 178 2.3E-63 T 09-03-2017 IPR011618 Sorbitol phosphotransferase enzyme II, N-terminal GO:0008982|GO:0009401|GO:0016021 BV404_RS10255 cdf670efd83d616367ce217b73bcd9d2 326 Pfam PF07663 Sorbitol phosphotransferase enzyme II C-terminus 234 325 8.0E-44 T 09-03-2017 IPR011638 Sorbitol phosphotransferase enzyme II, C-terminal GO:0008982|GO:0009401|GO:0016021 BV404_RS10255 cdf670efd83d616367ce217b73bcd9d2 326 TIGRFAM TIGR00825 EIIBC-GUT: PTS system, glucitol/sorbitol-specific, IIBC component 5 326 4.3E-154 T 09-03-2017 IPR004702 Phosphotransferease, sorbitol phosphotransferase enzyme II GO:0008982|GO:0009401|GO:0016021 BV404_RS01695 84a8448e5dea917d2ea9a2b57b72ee3d 158 Gene3D G3DSA:3.90.960.10 4 156 1.0E-38 T 09-03-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 BV404_RS01695 84a8448e5dea917d2ea9a2b57b72ee3d 158 Pfam PF04073 Aminoacyl-tRNA editing domain 28 147 9.0E-27 T 09-03-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 BV404_RS01695 84a8448e5dea917d2ea9a2b57b72ee3d 158 SUPERFAMILY SSF55826 5 155 1.19E-36 T 09-03-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 BV404_RS09940 baa9c920c5b340fc7d3356e93ac056ae 287 Gene3D G3DSA:1.10.10.10 9 109 1.8E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS09940 baa9c920c5b340fc7d3356e93ac056ae 287 SUPERFAMILY SSF46894 6 109 2.64E-18 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BV404_RS09940 baa9c920c5b340fc7d3356e93ac056ae 287 Pfam PF00486 Transcriptional regulatory protein, C terminal 31 107 3.2E-19 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BV404_RS09940 baa9c920c5b340fc7d3356e93ac056ae 287 SMART SM00862 30 107 1.1E-16 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BV404_RS02145 8db25a502f30895d93651e070ad20526 340 SUPERFAMILY SSF53335 155 336 5.87E-27 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS02145 8db25a502f30895d93651e070ad20526 340 Pfam PF08468 Methyltransferase small domain N-terminal 8 163 1.3E-56 T 09-03-2017 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 BV404_RS02145 8db25a502f30895d93651e070ad20526 340 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 269 275 - T 09-03-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BV404_RS02145 8db25a502f30895d93651e070ad20526 340 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 340 46.335 T 09-03-2017 IPR023543 rRNA small subunit methyltransferase C GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 BV404_RS02145 8db25a502f30895d93651e070ad20526 340 Pfam PF05175 Methyltransferase small domain 172 336 1.0E-60 T 09-03-2017 IPR007848 Methyltransferase small domain GO:0008168 BV404_RS02145 8db25a502f30895d93651e070ad20526 340 Gene3D G3DSA:3.40.50.150 170 337 1.3E-22 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS13540 153d70d5ac7ba50aa3ba365fd04d7453 343 Gene3D G3DSA:3.40.50.2000 133 317 2.5E-18 T 09-03-2017 BV404_RS13540 153d70d5ac7ba50aa3ba365fd04d7453 343 Pfam PF00534 Glycosyl transferases group 1 156 316 6.0E-21 T 09-03-2017 IPR001296 Glycosyl transferase, family 1 BV404_RS13540 153d70d5ac7ba50aa3ba365fd04d7453 343 SUPERFAMILY SSF53756 85 338 9.81E-41 T 09-03-2017 BV404_RS05835 d6b3bca3f8633c734ae6c1e125536e5a 502 Pfam PF14400 Inactive transglutaminase fused to 7 transmembrane helices 25 183 6.8E-57 T 09-03-2017 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices BV404_RS05835 d6b3bca3f8633c734ae6c1e125536e5a 502 Pfam PF14402 7 transmembrane helices usually fused to an inactive transglutaminase 190 498 6.3E-136 T 09-03-2017 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase BV404_RS11505 2aa51f74a35bc9eb9a131e1517b2a0f8 129 Pfam PF11697 Protein of unknown function (DUF3293) 31 100 3.5E-19 T 09-03-2017 IPR021710 Protein of unknown function DUF3293 BV404_RS09065 be5dcbe7a77dcba5daae1ee37263b6c6 116 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 09-03-2017 IPR019808 Histidine triad, conserved site BV404_RS09065 be5dcbe7a77dcba5daae1ee37263b6c6 116 SUPERFAMILY SSF54197 1 113 1.7E-35 T 09-03-2017 IPR011146 HIT-like domain GO:0003824 BV404_RS09065 be5dcbe7a77dcba5daae1ee37263b6c6 116 Gene3D G3DSA:3.30.428.10 2 110 4.7E-36 T 09-03-2017 IPR011146 HIT-like domain GO:0003824 BV404_RS09065 be5dcbe7a77dcba5daae1ee37263b6c6 116 PRINTS PR00332 Histidine triad family signature 6 22 3.3E-19 T 09-03-2017 IPR001310 Histidine triad (HIT) protein BV404_RS09065 be5dcbe7a77dcba5daae1ee37263b6c6 116 PRINTS PR00332 Histidine triad family signature 27 45 3.3E-19 T 09-03-2017 IPR001310 Histidine triad (HIT) protein BV404_RS09065 be5dcbe7a77dcba5daae1ee37263b6c6 116 PRINTS PR00332 Histidine triad family signature 95 105 3.3E-19 T 09-03-2017 IPR001310 Histidine triad (HIT) protein BV404_RS09065 be5dcbe7a77dcba5daae1ee37263b6c6 116 Pfam PF01230 HIT domain 12 109 1.4E-29 T 09-03-2017 IPR001310 Histidine triad (HIT) protein BV404_RS05100 be34195bb330160532d437b613448923 394 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 94 383 4.5E-81 T 09-03-2017 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 BV404_RS05100 be34195bb330160532d437b613448923 394 SUPERFAMILY SSF56322 17 386 6.41E-85 T 09-03-2017 IPR005801 ADC synthase GO:0009058 BV404_RS05100 be34195bb330160532d437b613448923 394 Gene3D G3DSA:3.60.120.10 97 386 8.7E-79 T 09-03-2017 IPR005801 ADC synthase GO:0009058 BV404_RS05100 be34195bb330160532d437b613448923 394 Pfam PF00425 chorismate binding enzyme 122 376 8.8E-70 T 09-03-2017 IPR015890 Chorismate-utilising enzyme, C-terminal BV404_RS05320 58773b78dd8d4cbca525145c0472b02c 776 Gene3D G3DSA:1.20.1640.10 217 402 5.3E-18 T 09-03-2017 BV404_RS05320 58773b78dd8d4cbca525145c0472b02c 776 Gene3D G3DSA:1.20.1640.10 633 762 2.2E-13 T 09-03-2017 BV404_RS05320 58773b78dd8d4cbca525145c0472b02c 776 SUPERFAMILY SSF82866 618 764 4.19E-23 T 09-03-2017 BV404_RS05320 58773b78dd8d4cbca525145c0472b02c 776 Pfam PF03176 MMPL family 194 427 2.0E-12 T 09-03-2017 IPR004869 Membrane transport protein, MMPL domain GO:0016020 BV404_RS05320 58773b78dd8d4cbca525145c0472b02c 776 SUPERFAMILY SSF82866 219 402 8.11E-18 T 09-03-2017 BV404_RS14250 76958c3b63b81bf86223cac07559e67b 453 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 449 42.75 T 09-03-2017 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 BV404_RS14250 76958c3b63b81bf86223cac07559e67b 453 Pfam PF12804 MobA-like NTP transferase domain 5 121 2.0E-23 T 09-03-2017 IPR025877 MobA-like NTP transferase BV404_RS14250 76958c3b63b81bf86223cac07559e67b 453 SUPERFAMILY SSF51161 252 434 1.71E-50 T 09-03-2017 IPR011004 Trimeric LpxA-like BV404_RS14250 76958c3b63b81bf86223cac07559e67b 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 314 348 3.2E-5 T 09-03-2017 IPR001451 Hexapeptide repeat BV404_RS14250 76958c3b63b81bf86223cac07559e67b 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 392 426 1.3E-7 T 09-03-2017 IPR001451 Hexapeptide repeat BV404_RS14250 76958c3b63b81bf86223cac07559e67b 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 266 295 2.4E-4 T 09-03-2017 IPR001451 Hexapeptide repeat BV404_RS14250 76958c3b63b81bf86223cac07559e67b 453 Gene3D G3DSA:2.160.10.10 242 321 2.0E-19 T 09-03-2017 BV404_RS14250 76958c3b63b81bf86223cac07559e67b 453 Gene3D G3DSA:3.90.550.10 1 241 5.8E-70 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases BV404_RS14250 76958c3b63b81bf86223cac07559e67b 453 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 452 1.7E-205 T 09-03-2017 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 BV404_RS14250 76958c3b63b81bf86223cac07559e67b 453 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 400 428 - T 09-03-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 BV404_RS14250 76958c3b63b81bf86223cac07559e67b 453 Gene3D G3DSA:2.160.10.10 322 452 1.3E-34 T 09-03-2017 BV404_RS14250 76958c3b63b81bf86223cac07559e67b 453 SUPERFAMILY SSF53448 1 249 3.76E-64 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases BV404_RS05050 994f12b6bbe23212f0f0e9f55250e760 302 SUPERFAMILY SSF103481 53 155 1.57E-14 T 09-03-2017 BV404_RS05050 994f12b6bbe23212f0f0e9f55250e760 302 SUPERFAMILY SSF103481 202 301 1.24E-15 T 09-03-2017 BV404_RS05050 994f12b6bbe23212f0f0e9f55250e760 302 Pfam PF00892 EamA-like transporter family 20 152 9.6E-22 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 BV404_RS05050 994f12b6bbe23212f0f0e9f55250e760 302 Pfam PF00892 EamA-like transporter family 168 301 1.0E-29 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 BV404_RS15700 d18d46816eeb5fd70999238019053703 300 Pfam PF02254 TrkA-N domain 175 285 1.4E-23 T 09-03-2017 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 BV404_RS15700 d18d46816eeb5fd70999238019053703 300 SUPERFAMILY SSF51735 174 299 9.32E-30 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS15700 d18d46816eeb5fd70999238019053703 300 PRINTS PR00335 TrkA potassium uptake protein signature 174 188 6.6E-9 T 09-03-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 BV404_RS15700 d18d46816eeb5fd70999238019053703 300 PRINTS PR00335 TrkA potassium uptake protein signature 220 230 6.6E-9 T 09-03-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 BV404_RS15700 d18d46816eeb5fd70999238019053703 300 PRINTS PR00335 TrkA potassium uptake protein signature 191 205 6.6E-9 T 09-03-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 BV404_RS15700 d18d46816eeb5fd70999238019053703 300 PRINTS PR00335 TrkA potassium uptake protein signature 231 241 6.6E-9 T 09-03-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 BV404_RS15700 d18d46816eeb5fd70999238019053703 300 Pfam PF00999 Sodium/hydrogen exchanger family 1 143 1.0E-24 T 09-03-2017 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 BV404_RS15700 d18d46816eeb5fd70999238019053703 300 Gene3D G3DSA:3.40.50.720 170 299 3.6E-36 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS07505 3821da910fa159c87494dc0b5a9c75af 148 Pfam PF05099 Tellurite resistance protein TerB 6 142 3.4E-38 T 09-03-2017 IPR007791 Co-chaperone DjlA, N-terminal BV404_RS07505 3821da910fa159c87494dc0b5a9c75af 148 Gene3D G3DSA:1.10.3680.10 1 145 2.0E-26 T 09-03-2017 IPR029024 TerB-like BV404_RS07505 3821da910fa159c87494dc0b5a9c75af 148 SUPERFAMILY SSF158682 1 146 9.94E-32 T 09-03-2017 IPR029024 TerB-like BV404_RS02380 db89513dd31bcefacd93362e4ed9d14c 344 Pfam PF00248 Aldo/keto reductase family 15 335 1.6E-72 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain BV404_RS02380 db89513dd31bcefacd93362e4ed9d14c 344 SUPERFAMILY SSF51430 1 343 2.23E-107 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain BV404_RS02380 db89513dd31bcefacd93362e4ed9d14c 344 Gene3D G3DSA:3.20.20.100 1 340 4.7E-105 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain BV404_RS02390 ce58cdfc6a4d49f8c8000252623ade69 221 SMART SM00927 53 151 5.7E-64 T 09-03-2017 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 BV404_RS02390 ce58cdfc6a4d49f8c8000252623ade69 221 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 221 144.764 T 09-03-2017 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 BV404_RS02390 ce58cdfc6a4d49f8c8000252623ade69 221 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 5 218 1.1E-98 T 09-03-2017 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 BV404_RS02390 ce58cdfc6a4d49f8c8000252623ade69 221 Pfam PF02976 DNA mismatch repair enzyme MutH 53 151 1.2E-33 T 09-03-2017 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 BV404_RS02390 ce58cdfc6a4d49f8c8000252623ade69 221 Gene3D G3DSA:3.40.600.10 3 220 1.9E-79 T 09-03-2017 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 BV404_RS02390 ce58cdfc6a4d49f8c8000252623ade69 221 SUPERFAMILY SSF52980 2 220 4.18E-80 T 09-03-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 BV404_RS12780 90d964a8541d5ad95809aa3b02650cf5 221 Pfam PF13505 Outer membrane protein beta-barrel domain 9 221 2.0E-11 T 09-03-2017 IPR027385 Outer membrane protein beta-barrel BV404_RS12780 90d964a8541d5ad95809aa3b02650cf5 221 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 8 221 6.4E-50 T 09-03-2017 IPR026387 Outer membrane protein BV404_RS02855 f74a8d9011440363653cb3b977dc76f7 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 1.1E-53 T 09-03-2017 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BV404_RS02855 f74a8d9011440363653cb3b977dc76f7 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 1.4E-54 T 09-03-2017 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BV404_RS02855 f74a8d9011440363653cb3b977dc76f7 156 SUPERFAMILY SSF52121 4 154 1.16E-58 T 09-03-2017 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BV404_RS02855 f74a8d9011440363653cb3b977dc76f7 156 Gene3D G3DSA:3.40.50.960 3 154 3.6E-63 T 09-03-2017 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BV404_RS02855 f74a8d9011440363653cb3b977dc76f7 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 30.904 T 09-03-2017 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BV404_RS06940 2d88f912b462b5789d648eabe1aa54ad 288 PIRSF PIRSF006221 1 288 6.0E-106 T 09-03-2017 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 BV404_RS06940 2d88f912b462b5789d648eabe1aa54ad 288 SUPERFAMILY SSF56112 3 282 1.84E-42 T 09-03-2017 IPR011009 Protein kinase-like domain BV404_RS06940 2d88f912b462b5789d648eabe1aa54ad 288 Gene3D G3DSA:3.90.1200.10 103 248 2.5E-6 T 09-03-2017 BV404_RS06940 2d88f912b462b5789d648eabe1aa54ad 288 Pfam PF03881 Fructosamine kinase 1 287 4.2E-123 T 09-03-2017 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 BV404_RS14980 bf64ae9edcb27be0d9db8c048b3a0018 103 SUPERFAMILY SSF51905 6 102 2.59E-20 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS14980 bf64ae9edcb27be0d9db8c048b3a0018 103 Gene3D G3DSA:3.50.50.60 2 102 4.2E-21 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS14980 bf64ae9edcb27be0d9db8c048b3a0018 103 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 63 81 6.1E-7 T 09-03-2017 BV404_RS14980 bf64ae9edcb27be0d9db8c048b3a0018 103 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 24 42 6.1E-7 T 09-03-2017 BV404_RS14980 bf64ae9edcb27be0d9db8c048b3a0018 103 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 101 8.6E-18 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS14980 bf64ae9edcb27be0d9db8c048b3a0018 103 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 27 36 1.5E-10 T 09-03-2017 BV404_RS14980 bf64ae9edcb27be0d9db8c048b3a0018 103 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 63 88 1.5E-10 T 09-03-2017 BV404_RS11300 a4818089827a1a257a558f2b2a3770bc 411 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 17 60 2.6E-10 T 09-03-2017 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal BV404_RS10515 0d8b02876ede2b8f4d9ea4ecd331efc2 181 Pfam PF07348 Syd protein (SUKH-2) 7 179 2.1E-70 T 09-03-2017 IPR009948 Syd GO:0009898 BV404_RS10515 0d8b02876ede2b8f4d9ea4ecd331efc2 181 Hamap MF_01104 Protein Syd [syd]. 3 181 37.796 T 09-03-2017 IPR009948 Syd GO:0009898 BV404_RS07325 a50f9707c8a0fc022e6e97be86946a0b 548 Gene3D G3DSA:3.40.50.720 18 170 2.9E-10 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS07325 a50f9707c8a0fc022e6e97be86946a0b 548 SUPERFAMILY SSF51735 18 216 3.15E-16 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS07325 a50f9707c8a0fc022e6e97be86946a0b 548 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 2 538 8.1E-206 T 09-03-2017 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 BV404_RS14610 b8084cbb8806e58122a64a362094b6e3 212 Gene3D G3DSA:3.40.50.150 73 203 2.9E-15 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS14610 b8084cbb8806e58122a64a362094b6e3 212 Pfam PF13489 Methyltransferase domain 62 198 2.2E-21 T 09-03-2017 BV404_RS14610 b8084cbb8806e58122a64a362094b6e3 212 SUPERFAMILY SSF53335 46 198 2.52E-20 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS07615 505359c47f077d7db2b893392cb2b0ef 312 SUPERFAMILY SSF75615 115 196 9.16E-22 T 09-03-2017 BV404_RS07615 505359c47f077d7db2b893392cb2b0ef 312 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 195 3.3E-59 T 09-03-2017 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 BV404_RS07615 505359c47f077d7db2b893392cb2b0ef 312 Gene3D G3DSA:1.10.8.210 150 210 1.7E-17 T 09-03-2017 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 BV404_RS07615 505359c47f077d7db2b893392cb2b0ef 312 SUPERFAMILY SSF51735 1 113 1.18E-26 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS07615 505359c47f077d7db2b893392cb2b0ef 312 Gene3D G3DSA:3.40.50.720 1 113 7.9E-39 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS07615 505359c47f077d7db2b893392cb2b0ef 312 Gene3D G3DSA:3.40.1010.10 214 285 5.5E-4 T 09-03-2017 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 BV404_RS07615 505359c47f077d7db2b893392cb2b0ef 312 Pfam PF10414 Sirohaem synthase dimerisation region 151 205 2.1E-11 T 09-03-2017 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 BV404_RS07615 505359c47f077d7db2b893392cb2b0ef 312 Pfam PF13241 Putative NAD(P)-binding 6 116 2.9E-29 T 09-03-2017 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 BV404_RS07615 505359c47f077d7db2b893392cb2b0ef 312 Gene3D G3DSA:3.30.160.110 114 149 6.7E-16 T 09-03-2017 BV404_RS06220 9ec116d94bc40dbe0948bc12d087065e 415 Pfam PF13584 Oxygen tolerance 53 283 1.3E-31 T 09-03-2017 IPR025738 Aerotolerance-related protein BatD BV404_RS03215 6a1d64a13afeaed79cc6dd0c70d04ca1 361 PRINTS PR01010 Flagellar P-ring protein signature 20 35 2.7E-85 T 09-03-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BV404_RS03215 6a1d64a13afeaed79cc6dd0c70d04ca1 361 PRINTS PR01010 Flagellar P-ring protein signature 248 260 2.7E-85 T 09-03-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BV404_RS03215 6a1d64a13afeaed79cc6dd0c70d04ca1 361 PRINTS PR01010 Flagellar P-ring protein signature 52 67 2.7E-85 T 09-03-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BV404_RS03215 6a1d64a13afeaed79cc6dd0c70d04ca1 361 PRINTS PR01010 Flagellar P-ring protein signature 35 50 2.7E-85 T 09-03-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BV404_RS03215 6a1d64a13afeaed79cc6dd0c70d04ca1 361 PRINTS PR01010 Flagellar P-ring protein signature 117 135 2.7E-85 T 09-03-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BV404_RS03215 6a1d64a13afeaed79cc6dd0c70d04ca1 361 PRINTS PR01010 Flagellar P-ring protein signature 158 176 2.7E-85 T 09-03-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BV404_RS03215 6a1d64a13afeaed79cc6dd0c70d04ca1 361 PRINTS PR01010 Flagellar P-ring protein signature 78 97 2.7E-85 T 09-03-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BV404_RS03215 6a1d64a13afeaed79cc6dd0c70d04ca1 361 PRINTS PR01010 Flagellar P-ring protein signature 100 117 2.7E-85 T 09-03-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BV404_RS03215 6a1d64a13afeaed79cc6dd0c70d04ca1 361 PRINTS PR01010 Flagellar P-ring protein signature 184 202 2.7E-85 T 09-03-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BV404_RS03215 6a1d64a13afeaed79cc6dd0c70d04ca1 361 Hamap MF_00416 Flagellar P-ring protein [flgI]. 3 361 39.719 T 09-03-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BV404_RS03215 6a1d64a13afeaed79cc6dd0c70d04ca1 361 Pfam PF02119 Flagellar P-ring protein 20 360 5.2E-136 T 09-03-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BV404_RS05360 715e5e1ef2169c4d981b5b70c2d17b45 85 Pfam PF00550 Phosphopantetheine attachment site 11 78 9.1E-14 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain BV404_RS05360 715e5e1ef2169c4d981b5b70c2d17b45 85 Hamap MF_01217 Acyl carrier protein [acpP]. 8 82 14.289 T 09-03-2017 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BV404_RS05360 715e5e1ef2169c4d981b5b70c2d17b45 85 Gene3D G3DSA:1.10.1200.10 5 83 5.5E-20 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain BV404_RS05360 715e5e1ef2169c4d981b5b70c2d17b45 85 SUPERFAMILY SSF47336 5 83 2.62E-20 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain BV404_RS05165 d50465b6891813ba504f21ebcd5f8a79 241 SUPERFAMILY SSF56214 123 235 5.76E-14 T 09-03-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 BV404_RS05165 d50465b6891813ba504f21ebcd5f8a79 241 PRINTS PR01399 Enterobactin synthetase component D signature 85 103 3.4E-16 T 09-03-2017 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 BV404_RS05165 d50465b6891813ba504f21ebcd5f8a79 241 PRINTS PR01399 Enterobactin synthetase component D signature 165 181 3.4E-16 T 09-03-2017 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 BV404_RS05165 d50465b6891813ba504f21ebcd5f8a79 241 PRINTS PR01399 Enterobactin synthetase component D signature 55 75 3.4E-16 T 09-03-2017 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 BV404_RS05165 d50465b6891813ba504f21ebcd5f8a79 241 Gene3D G3DSA:3.90.470.20 124 215 3.6E-8 T 09-03-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 BV404_RS05165 d50465b6891813ba504f21ebcd5f8a79 241 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 123 208 1.7E-11 T 09-03-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 BV404_RS02460 2d6e321c7441df1c08410253b0c70c6b 148 Gene3D G3DSA:3.10.50.40 134 148 4.1E-18 T 09-03-2017 BV404_RS02460 2d6e321c7441df1c08410253b0c70c6b 148 Gene3D G3DSA:3.10.50.40 6 84 4.1E-18 T 09-03-2017 BV404_RS02460 2d6e321c7441df1c08410253b0c70c6b 148 SUPERFAMILY SSF54534 9 147 3.34E-34 T 09-03-2017 BV404_RS02460 2d6e321c7441df1c08410253b0c70c6b 148 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 7 145 6.9E-11 T 09-03-2017 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 BV404_RS07510 771a4d440a09c620d96d0bb713571202 176 Gene3D G3DSA:3.30.420.10 2 176 1.1E-38 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 BV404_RS07510 771a4d440a09c620d96d0bb713571202 176 SMART SM00479 5 176 4.5E-4 T 09-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III BV404_RS07510 771a4d440a09c620d96d0bb713571202 176 SUPERFAMILY SSF53098 3 175 1.1E-27 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 BV404_RS07510 771a4d440a09c620d96d0bb713571202 176 Pfam PF00929 Exonuclease 7 171 4.1E-11 T 09-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III BV404_RS00565 b9c0f1f85da7e42076d4bef27cd62a91 184 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 41.903 T 09-03-2017 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 BV404_RS00565 b9c0f1f85da7e42076d4bef27cd62a91 184 PIRSF PIRSF039093 1 175 1.0E-86 T 09-03-2017 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 BV404_RS00565 b9c0f1f85da7e42076d4bef27cd62a91 184 Pfam PF00227 Proteasome subunit 2 169 4.8E-23 T 09-03-2017 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5687128|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-983168 BV404_RS00565 b9c0f1f85da7e42076d4bef27cd62a91 184 Gene3D G3DSA:3.60.20.10 2 173 1.2E-85 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal BV404_RS00565 b9c0f1f85da7e42076d4bef27cd62a91 184 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 2.0E-86 T 09-03-2017 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 BV404_RS00565 b9c0f1f85da7e42076d4bef27cd62a91 184 SUPERFAMILY SSF56235 2 172 1.61E-57 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal BV404_RS04405 14a37e1a57bc4610e791b806994e8408 185 SUPERFAMILY SSF144091 4 174 2.62E-25 T 09-03-2017 BV404_RS04405 14a37e1a57bc4610e791b806994e8408 185 Gene3D G3DSA:1.20.1540.10 7 174 3.8E-16 T 09-03-2017 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 BV404_RS04405 14a37e1a57bc4610e791b806994e8408 185 Pfam PF01694 Rhomboid family 33 174 2.0E-12 T 09-03-2017 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 BV404_RS04405 14a37e1a57bc4610e791b806994e8408 185 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 25 172 7.3E-50 T 09-03-2017 IPR023826 Rhomboid-like serine protease, proteobacteria BV404_RS07410 9c5f8965862d12315030ce1f6a6efa87 352 Pfam PF00793 DAHP synthetase I family 44 338 5.8E-98 T 09-03-2017 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 BV404_RS07410 9c5f8965862d12315030ce1f6a6efa87 352 Gene3D G3DSA:3.20.20.70 10 350 2.1E-145 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS07410 9c5f8965862d12315030ce1f6a6efa87 352 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 350 2.0E-158 T 09-03-2017 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 BV404_RS07410 9c5f8965862d12315030ce1f6a6efa87 352 SUPERFAMILY SSF51569 8 349 3.35E-129 T 09-03-2017 BV404_RS07410 9c5f8965862d12315030ce1f6a6efa87 352 PIRSF PIRSF001361 1 352 1.1E-154 T 09-03-2017 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 BV404_RS14510 cc5d4ac8b1a231b03ea7868e57d48c1a 249 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 24 209 9.8E-44 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal BV404_RS14510 cc5d4ac8b1a231b03ea7868e57d48c1a 249 TIGRFAM TIGR00760 araD: L-ribulose-5-phosphate 4-epimerase 17 243 7.1E-118 T 09-03-2017 IPR004661 L-ribulose-5-phosphate 4-epimerase GO:0008270|GO:0008742|GO:0019572 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 BV404_RS14510 cc5d4ac8b1a231b03ea7868e57d48c1a 249 SUPERFAMILY SSF53639 17 235 3.73E-69 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal BV404_RS14510 cc5d4ac8b1a231b03ea7868e57d48c1a 249 SMART SM01007 22 210 5.3E-63 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal BV404_RS14510 cc5d4ac8b1a231b03ea7868e57d48c1a 249 Gene3D G3DSA:3.40.225.10 18 243 5.3E-70 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal BV404_RS07080 25daefe751d90ccc76693bb122ffb42f 245 Gene3D G3DSA:3.40.50.1220 71 113 7.5E-41 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain BV404_RS07080 25daefe751d90ccc76693bb122ffb42f 245 Gene3D G3DSA:3.40.50.1220 6 21 7.5E-41 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain BV404_RS07080 25daefe751d90ccc76693bb122ffb42f 245 Gene3D G3DSA:3.40.50.1220 165 231 7.5E-41 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain BV404_RS07080 25daefe751d90ccc76693bb122ffb42f 245 Gene3D G3DSA:3.30.1600.10 114 158 2.3E-27 T 09-03-2017 IPR026591 Sirtuin family, catalytic core small domain BV404_RS07080 25daefe751d90ccc76693bb122ffb42f 245 Gene3D G3DSA:3.30.1600.10 22 61 2.3E-27 T 09-03-2017 IPR026591 Sirtuin family, catalytic core small domain BV404_RS07080 25daefe751d90ccc76693bb122ffb42f 245 Pfam PF02146 Sir2 family 13 186 5.1E-49 T 09-03-2017 IPR003000 Sirtuin family GO:0070403 BV404_RS07080 25daefe751d90ccc76693bb122ffb42f 245 SUPERFAMILY SSF52467 6 234 5.78E-72 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain BV404_RS07080 25daefe751d90ccc76693bb122ffb42f 245 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 6 236 56.099 T 09-03-2017 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 BV404_RS12335 e052d5a89c578b252ce3a487e7484b04 239 SUPERFAMILY SSF53335 16 238 3.01E-36 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS12335 e052d5a89c578b252ce3a487e7484b04 239 Pfam PF02390 Putative methyltransferase 62 232 3.9E-59 T 09-03-2017 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 BV404_RS12335 e052d5a89c578b252ce3a487e7484b04 239 Gene3D G3DSA:3.40.50.150 60 195 3.9E-13 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS12335 e052d5a89c578b252ce3a487e7484b04 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 23 238 30.461 T 09-03-2017 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 BV404_RS12335 e052d5a89c578b252ce3a487e7484b04 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 47 238 3.2E-68 T 09-03-2017 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 BV404_RS03625 c1c57fd77036f3584dc96a5d5755b8e7 129 Pfam PF04347 Flagellar biosynthesis protein, FliO 43 121 4.7E-19 T 09-03-2017 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 BV404_RS03625 c1c57fd77036f3584dc96a5d5755b8e7 129 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 31 98 2.1E-22 T 09-03-2017 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 BV404_RS03460 7aea3755a1f95ac13a12bcf22ec7b93b 344 Pfam PF06804 NlpB/DapX lipoprotein 36 335 6.2E-104 T 09-03-2017 IPR010653 NlpB/DapX lipoprotein BV404_RS03460 7aea3755a1f95ac13a12bcf22ec7b93b 344 PIRSF PIRSF026343 4 339 1.5E-130 T 09-03-2017 IPR014524 Outer membrane protein assembly factor BamC BV404_RS03460 7aea3755a1f95ac13a12bcf22ec7b93b 344 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 4 337 35.287 T 09-03-2017 IPR014524 Outer membrane protein assembly factor BamC BV404_RS07935 7abc4ec18ce73ffbd0c493789fd835c0 399 Pfam PF07690 Major Facilitator Superfamily 28 359 1.8E-14 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BV404_RS07935 7abc4ec18ce73ffbd0c493789fd835c0 399 Gene3D G3DSA:1.20.1250.20 27 204 2.8E-12 T 09-03-2017 BV404_RS07935 7abc4ec18ce73ffbd0c493789fd835c0 399 Gene3D G3DSA:1.20.1250.20 219 396 1.8E-5 T 09-03-2017 BV404_RS07935 7abc4ec18ce73ffbd0c493789fd835c0 399 SUPERFAMILY SSF103473 20 397 2.22E-33 T 09-03-2017 IPR020846 Major facilitator superfamily domain BV404_RS05390 dc6f716ba85bb3fc054a61d14a2146fa 413 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 2.3E-7 T 09-03-2017 BV404_RS05390 dc6f716ba85bb3fc054a61d14a2146fa 413 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 2.3E-7 T 09-03-2017 BV404_RS05390 dc6f716ba85bb3fc054a61d14a2146fa 413 Gene3D G3DSA:3.50.50.60 5 180 1.7E-34 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS05390 dc6f716ba85bb3fc054a61d14a2146fa 413 Gene3D G3DSA:3.50.50.60 281 323 1.7E-34 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS05390 dc6f716ba85bb3fc054a61d14a2146fa 413 SUPERFAMILY SSF51905 5 175 1.94E-46 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS05390 dc6f716ba85bb3fc054a61d14a2146fa 413 SUPERFAMILY SSF51905 285 364 1.94E-46 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS05390 dc6f716ba85bb3fc054a61d14a2146fa 413 Pfam PF01494 FAD binding domain 7 165 1.1E-17 T 09-03-2017 IPR002938 FAD-binding domain GO:0071949 BV404_RS13275 8aba2d0387233c9009fd08a40ae3f4f1 212 Pfam PF00929 Exonuclease 31 193 2.0E-18 T 09-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III BV404_RS13275 8aba2d0387233c9009fd08a40ae3f4f1 212 SMART SM00479 29 202 4.6E-24 T 09-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III BV404_RS13275 8aba2d0387233c9009fd08a40ae3f4f1 212 SUPERFAMILY SSF53098 27 199 1.4E-35 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 BV404_RS13275 8aba2d0387233c9009fd08a40ae3f4f1 212 Gene3D G3DSA:3.30.420.10 27 199 1.7E-35 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 BV404_RS03065 efe9d109bcd4ae5dbc6656cb881b3fb2 192 Pfam PF01713 Smr domain 94 174 1.7E-20 T 09-03-2017 IPR002625 Smr domain BV404_RS03065 efe9d109bcd4ae5dbc6656cb881b3fb2 192 SUPERFAMILY SSF160443 92 174 4.84E-14 T 09-03-2017 IPR002625 Smr domain BV404_RS03065 efe9d109bcd4ae5dbc6656cb881b3fb2 192 SMART SM00463 91 174 3.8E-13 T 09-03-2017 IPR002625 Smr domain BV404_RS03960 451786626ed69f8440f2354d460203cd 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 4.5E-66 T 09-03-2017 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 BV404_RS03960 451786626ed69f8440f2354d460203cd 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 4.5E-66 T 09-03-2017 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 BV404_RS03960 451786626ed69f8440f2354d460203cd 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 4.5E-66 T 09-03-2017 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 BV404_RS03960 451786626ed69f8440f2354d460203cd 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 4.5E-66 T 09-03-2017 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 BV404_RS03960 451786626ed69f8440f2354d460203cd 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 4.5E-66 T 09-03-2017 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 BV404_RS03960 451786626ed69f8440f2354d460203cd 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 204 228 4.5E-66 T 09-03-2017 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 BV404_RS03960 451786626ed69f8440f2354d460203cd 250 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 228 3.5E-86 T 09-03-2017 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 BV404_RS03960 451786626ed69f8440f2354d460203cd 250 Pfam PF01578 Cytochrome C assembly protein 27 184 8.9E-32 T 09-03-2017 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 BV404_RS07585 9336dff59637477164612d8265d21060 202 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 73 183 1.9E-10 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 BV404_RS07585 9336dff59637477164612d8265d21060 202 Gene3D G3DSA:3.40.50.1000 1 195 2.1E-32 T 09-03-2017 IPR023214 HAD-like domain BV404_RS07585 9336dff59637477164612d8265d21060 202 SUPERFAMILY SSF56784 4 193 2.41E-30 T 09-03-2017 IPR023214 HAD-like domain BV404_RS07585 9336dff59637477164612d8265d21060 202 Pfam PF13419 Haloacid dehalogenase-like hydrolase 84 181 9.7E-9 T 09-03-2017 IPR023214 HAD-like domain BV404_RS07585 9336dff59637477164612d8265d21060 202 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 1.5E-7 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 BV404_RS07585 9336dff59637477164612d8265d21060 202 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 147 167 1.5E-7 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 BV404_RS07585 9336dff59637477164612d8265d21060 202 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 1.5E-7 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 BV404_RS07585 9336dff59637477164612d8265d21060 202 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 98 111 1.5E-7 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 BV404_RS07205 1538a2800fedb3efee22319c8c4e0d17 122 Pfam PF12472 Phage related protein 63 119 3.9E-13 T 09-03-2017 IPR021096 Vibrio phage VSK, Orf152 BV404_RS07205 1538a2800fedb3efee22319c8c4e0d17 122 Gene3D G3DSA:1.10.260.40 7 63 1.1E-4 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 BV404_RS07205 1538a2800fedb3efee22319c8c4e0d17 122 SUPERFAMILY SSF47413 18 63 7.51E-5 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 BV404_RS11120 76942ccb8b55d64a79487e0d650c928c 192 SMART SM00464 3 185 2.5E-4 T 09-03-2017 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 BV404_RS11120 76942ccb8b55d64a79487e0d650c928c 192 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 3 133 3.0E-15 T 09-03-2017 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 BV404_RS11120 76942ccb8b55d64a79487e0d650c928c 192 SUPERFAMILY SSF88697 3 188 1.79E-46 T 09-03-2017 IPR015947 PUA-like domain BV404_RS01625 0369b9ce64df41016780f2b4099100b8 348 SUPERFAMILY SSF53756 11 293 1.57E-10 T 09-03-2017 BV404_RS01625 0369b9ce64df41016780f2b4099100b8 348 Pfam PF13528 Glycosyl transferase family 1 2 299 5.5E-38 T 09-03-2017 BV404_RS01625 0369b9ce64df41016780f2b4099100b8 348 TIGRFAM TIGR00661 MJ1255: conserved hypothetical protein 2 310 6.3E-108 T 09-03-2017 IPR005262 Conserved hypothetical protein CHP00661 BV404_RS01625 0369b9ce64df41016780f2b4099100b8 348 Gene3D G3DSA:3.40.50.2000 216 300 8.6E-4 T 09-03-2017 BV404_RS04665 cf34e7a34b2ee613bef71b853dde74b8 376 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 8 353 8.6E-117 T 09-03-2017 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 BV404_RS04665 cf34e7a34b2ee613bef71b853dde74b8 376 SUPERFAMILY SSF160544 245 352 5.23E-35 T 09-03-2017 IPR029025 Type III secretion system substrate exporter, C-terminal BV404_RS04665 cf34e7a34b2ee613bef71b853dde74b8 376 Gene3D G3DSA:3.40.1690.10 219 357 5.7E-57 T 09-03-2017 IPR029025 Type III secretion system substrate exporter, C-terminal BV404_RS04665 cf34e7a34b2ee613bef71b853dde74b8 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 209 227 2.4E-36 T 09-03-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BV404_RS04665 cf34e7a34b2ee613bef71b853dde74b8 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 11 33 2.4E-36 T 09-03-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BV404_RS04665 cf34e7a34b2ee613bef71b853dde74b8 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 273 288 2.4E-36 T 09-03-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BV404_RS04665 cf34e7a34b2ee613bef71b853dde74b8 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 303 324 2.4E-36 T 09-03-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BV404_RS04665 cf34e7a34b2ee613bef71b853dde74b8 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 229 246 2.4E-36 T 09-03-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BV404_RS04665 cf34e7a34b2ee613bef71b853dde74b8 376 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 348 8.4E-119 T 09-03-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BV404_RS13705 1208b8ad06762c3c4911472af92c0cee 305 SUPERFAMILY SSF103481 192 289 2.22E-7 T 09-03-2017 BV404_RS13705 1208b8ad06762c3c4911472af92c0cee 305 Pfam PF00892 EamA-like transporter family 11 145 4.2E-15 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 BV404_RS13705 1208b8ad06762c3c4911472af92c0cee 305 TIGRFAM TIGR00688 rarD: protein RarD 10 264 1.2E-85 T 09-03-2017 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 BV404_RS13705 1208b8ad06762c3c4911472af92c0cee 305 SUPERFAMILY SSF103481 50 146 7.98E-13 T 09-03-2017 BV404_RS11730 3e829a14aa57f3080370dbadf8dd2c6b 189 Pfam PF04972 BON domain 122 188 3.3E-14 T 09-03-2017 IPR007055 BON domain BV404_RS11730 3e829a14aa57f3080370dbadf8dd2c6b 189 Pfam PF04972 BON domain 63 112 1.1E-6 T 09-03-2017 IPR007055 BON domain BV404_RS03915 6eb45f2c35c06e9b69b446763c397329 238 Pfam PF04344 Chemotaxis phosphatase, CheZ 37 238 1.1E-78 T 09-03-2017 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 BV404_RS03915 6eb45f2c35c06e9b69b446763c397329 238 Gene3D G3DSA:1.10.287.500 58 189 8.8E-52 T 09-03-2017 BV404_RS03915 6eb45f2c35c06e9b69b446763c397329 238 SUPERFAMILY SSF75708 26 237 6.41E-67 T 09-03-2017 BV404_RS03915 6eb45f2c35c06e9b69b446763c397329 238 PIRSF PIRSF002884 13 238 4.3E-91 T 09-03-2017 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 BV404_RS06880 d5faaaf189e8f55065d5a1cb24897e10 455 Pfam PF01618 MotA/TolQ/ExbB proton channel family 308 427 2.2E-30 T 09-03-2017 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 BV404_RS06880 d5faaaf189e8f55065d5a1cb24897e10 455 PIRSF PIRSF037714 1 450 1.7E-155 T 09-03-2017 IPR017270 Putative MotA/TolQ/ExbB family protein BV404_RS09000 b85dcad928b8520271e6a0b816c1721e 414 Pfam PF02687 FtsX-like permease family 274 407 6.4E-18 T 09-03-2017 IPR003838 ABC transporter permease protein domain GO:0016020 BV404_RS09000 b85dcad928b8520271e6a0b816c1721e 414 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 413 5.7E-157 T 09-03-2017 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 BV404_RS09000 b85dcad928b8520271e6a0b816c1721e 414 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 4 414 8.7E-210 T 09-03-2017 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0006810|GO:0009276|GO:0016021 BV404_RS09000 b85dcad928b8520271e6a0b816c1721e 414 Pfam PF12704 MacB-like periplasmic core domain 30 240 4.9E-13 T 09-03-2017 IPR025857 MacB-like periplasmic core domain BV404_RS00595 751fa6008412fdc16f6ad0b4b0508d2a 115 Gene3D G3DSA:3.30.429.10 1 115 1.5E-39 T 09-03-2017 BV404_RS00595 751fa6008412fdc16f6ad0b4b0508d2a 115 SUPERFAMILY SSF55331 2 115 9.77E-36 T 09-03-2017 IPR014347 Tautomerase/MIF superfamily BV404_RS00595 751fa6008412fdc16f6ad0b4b0508d2a 115 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 90 1.3E-6 T 09-03-2017 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 BV404_RS07775 14455f21cd8d213b1bfdd9841b9c5970 119 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 112 3.7E-8 T 09-03-2017 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BV404_RS07775 14455f21cd8d213b1bfdd9841b9c5970 119 Gene3D G3DSA:3.10.180.10 7 116 1.5E-24 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BV404_RS07775 14455f21cd8d213b1bfdd9841b9c5970 119 SUPERFAMILY SSF54593 6 117 3.36E-21 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BV404_RS09865 d7de4b11b2fb3cd00a7c52d76f157f1f 422 Gene3D G3DSA:3.90.190.20 289 418 7.1E-45 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BV404_RS09865 d7de4b11b2fb3cd00a7c52d76f157f1f 422 SUPERFAMILY SSF53623 14 285 3.27E-85 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 BV404_RS09865 d7de4b11b2fb3cd00a7c52d76f157f1f 422 Pfam PF08245 Mur ligase middle domain 54 194 8.7E-8 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 BV404_RS09865 d7de4b11b2fb3cd00a7c52d76f157f1f 422 TIGRFAM TIGR01499 folC: bifunctional protein FolC 32 415 8.1E-106 T 09-03-2017 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 BV404_RS09865 d7de4b11b2fb3cd00a7c52d76f157f1f 422 Gene3D G3DSA:3.40.1190.10 13 286 3.0E-87 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 BV404_RS09865 d7de4b11b2fb3cd00a7c52d76f157f1f 422 PIRSF PIRSF001563 7 421 2.3E-107 T 09-03-2017 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 BV404_RS09865 d7de4b11b2fb3cd00a7c52d76f157f1f 422 Pfam PF02875 Mur ligase family, glutamate ligase domain 288 337 3.0E-7 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BV404_RS09865 d7de4b11b2fb3cd00a7c52d76f157f1f 422 SUPERFAMILY SSF53244 288 417 2.59E-32 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BV404_RS09865 d7de4b11b2fb3cd00a7c52d76f157f1f 422 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 09-03-2017 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 BV404_RS11050 2de795e4b2891376de9155d065987e89 272 Gene3D G3DSA:3.40.50.300 19 263 5.8E-68 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11050 2de795e4b2891376de9155d065987e89 272 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 26 272 2.8E-122 T 09-03-2017 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 BV404_RS11050 2de795e4b2891376de9155d065987e89 272 SMART SM00382 50 252 2.0E-15 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS11050 2de795e4b2891376de9155d065987e89 272 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS11050 2de795e4b2891376de9155d065987e89 272 Pfam PF00005 ABC transporter 41 197 1.7E-31 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS11050 2de795e4b2891376de9155d065987e89 272 SUPERFAMILY SSF52540 22 258 4.5E-60 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS21860 f4be22bf5e617ffee6e4eaaa3070de25 235 Gene3D G3DSA:3.40.50.300 48 178 3.4E-9 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS21860 f4be22bf5e617ffee6e4eaaa3070de25 235 Pfam PF13401 AAA domain 62 168 5.8E-7 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS21860 f4be22bf5e617ffee6e4eaaa3070de25 235 SUPERFAMILY SSF52540 47 225 4.47E-13 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS08295 5fe0c55a32b18772d7e53a86734aad01 490 Pfam PF03553 Na+/H+ antiporter family 215 489 2.0E-26 T 09-03-2017 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 BV404_RS02875 edd7e4c2ff47504a185138a8e0657b1e 126 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 126 29.277 T 09-03-2017 IPR020911 Uncharacterised protein family UPF0325 BV404_RS02875 edd7e4c2ff47504a185138a8e0657b1e 126 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 126 7.0E-60 T 09-03-2017 IPR020911 Uncharacterised protein family UPF0325 BV404_RS02875 edd7e4c2ff47504a185138a8e0657b1e 126 Pfam PF11944 Protein of unknown function (DUF3461) 1 126 2.5E-56 T 09-03-2017 IPR020911 Uncharacterised protein family UPF0325 BV404_RS05455 b2bce434275dff1f23154bd7fa7c928d 314 Pfam PF02653 Branched-chain amino acid transport system / permease component 7 268 4.5E-28 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 BV404_RS00605 e2e267a46dbe9cd455fa81a4579b3990 116 Pfam PF11333 Protein of unknown function (DUF3135) 13 92 6.2E-32 T 09-03-2017 IPR021482 Protein of unknown function DUF3135 BV404_RS07285 b0120393248144a368e69ba62771d682 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 51.828 T 09-03-2017 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 BV404_RS07285 b0120393248144a368e69ba62771d682 172 Gene3D G3DSA:3.10.129.10 2 169 1.6E-60 T 09-03-2017 IPR029069 HotDog domain BV404_RS07285 b0120393248144a368e69ba62771d682 172 SUPERFAMILY SSF54637 4 169 2.94E-57 T 09-03-2017 IPR029069 HotDog domain BV404_RS07285 b0120393248144a368e69ba62771d682 172 Pfam PF07977 FabA-like domain 29 158 9.7E-55 T 09-03-2017 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 BV404_RS07285 b0120393248144a368e69ba62771d682 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 172 2.8E-93 T 09-03-2017 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 BV404_RS09605 dec8d6863ed9e0db26d34dd8b2b915c8 146 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 1 138 4.7E-34 T 09-03-2017 IPR023485 Phosphotyrosine protein phosphatase I superfamily BV404_RS09605 dec8d6863ed9e0db26d34dd8b2b915c8 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 112 127 1.5E-11 T 09-03-2017 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 BV404_RS09605 dec8d6863ed9e0db26d34dd8b2b915c8 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 37 53 1.5E-11 T 09-03-2017 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 BV404_RS09605 dec8d6863ed9e0db26d34dd8b2b915c8 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 71 86 1.5E-11 T 09-03-2017 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 BV404_RS09605 dec8d6863ed9e0db26d34dd8b2b915c8 146 Gene3D G3DSA:3.40.50.270 1 144 1.5E-43 T 09-03-2017 BV404_RS09605 dec8d6863ed9e0db26d34dd8b2b915c8 146 SMART SM00226 2 140 7.3E-34 T 09-03-2017 IPR023485 Phosphotyrosine protein phosphatase I superfamily BV404_RS09605 dec8d6863ed9e0db26d34dd8b2b915c8 146 SUPERFAMILY SSF52788 1 139 1.7E-41 T 09-03-2017 IPR023485 Phosphotyrosine protein phosphatase I superfamily BV404_RS12640 ad4ed8cf447327a3076b8b754bacab84 482 PIRSF PIRSF028153 1 482 5.5E-196 T 09-03-2017 IPR016871 MSHA biogenesis protein, MshI BV404_RS12640 ad4ed8cf447327a3076b8b754bacab84 482 SUPERFAMILY SSF53067 38 155 5.44E-14 T 09-03-2017 BV404_RS04550 39d0c46d7ce2df56531a1a1075ceb32e 373 PRINTS PR01010 Flagellar P-ring protein signature 30 45 2.0E-77 T 09-03-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BV404_RS04550 39d0c46d7ce2df56531a1a1075ceb32e 373 PRINTS PR01010 Flagellar P-ring protein signature 64 79 2.0E-77 T 09-03-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BV404_RS04550 39d0c46d7ce2df56531a1a1075ceb32e 373 PRINTS PR01010 Flagellar P-ring protein signature 112 129 2.0E-77 T 09-03-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BV404_RS04550 39d0c46d7ce2df56531a1a1075ceb32e 373 PRINTS PR01010 Flagellar P-ring protein signature 45 60 2.0E-77 T 09-03-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BV404_RS04550 39d0c46d7ce2df56531a1a1075ceb32e 373 PRINTS PR01010 Flagellar P-ring protein signature 90 109 2.0E-77 T 09-03-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BV404_RS04550 39d0c46d7ce2df56531a1a1075ceb32e 373 PRINTS PR01010 Flagellar P-ring protein signature 170 188 2.0E-77 T 09-03-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BV404_RS04550 39d0c46d7ce2df56531a1a1075ceb32e 373 PRINTS PR01010 Flagellar P-ring protein signature 129 147 2.0E-77 T 09-03-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BV404_RS04550 39d0c46d7ce2df56531a1a1075ceb32e 373 PRINTS PR01010 Flagellar P-ring protein signature 196 214 2.0E-77 T 09-03-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BV404_RS04550 39d0c46d7ce2df56531a1a1075ceb32e 373 PRINTS PR01010 Flagellar P-ring protein signature 260 272 2.0E-77 T 09-03-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BV404_RS04550 39d0c46d7ce2df56531a1a1075ceb32e 373 Pfam PF02119 Flagellar P-ring protein 31 372 8.3E-137 T 09-03-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BV404_RS04550 39d0c46d7ce2df56531a1a1075ceb32e 373 Hamap MF_00416 Flagellar P-ring protein [flgI]. 10 373 37.179 T 09-03-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BV404_RS11215 490e9ad6b5e5bfbdd540961079f670e6 335 SUPERFAMILY SSF51556 3 332 1.23E-90 T 09-03-2017 IPR032466 Metal-dependent hydrolase BV404_RS11215 490e9ad6b5e5bfbdd540961079f670e6 335 Pfam PF00962 Adenosine/AMP deaminase 8 323 1.0E-73 T 09-03-2017 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 BV404_RS11215 490e9ad6b5e5bfbdd540961079f670e6 335 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 8 327 2.2E-116 T 09-03-2017 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 BV404_RS11215 490e9ad6b5e5bfbdd540961079f670e6 335 Hamap MF_01962 Adenine deaminase. 4 316 84.18 T 09-03-2017 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 BV404_RS11215 490e9ad6b5e5bfbdd540961079f670e6 335 Gene3D G3DSA:3.20.20.140 3 329 2.0E-105 T 09-03-2017 BV404_RS05800 c296c21d0b1df61d0ab24551152ef7c3 235 SMART SM00862 156 232 2.8E-19 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BV404_RS05800 c296c21d0b1df61d0ab24551152ef7c3 235 SUPERFAMILY SSF46894 134 233 2.1E-26 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BV404_RS05800 c296c21d0b1df61d0ab24551152ef7c3 235 Pfam PF00072 Response regulator receiver domain 5 113 6.8E-27 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS05800 c296c21d0b1df61d0ab24551152ef7c3 235 Gene3D G3DSA:3.40.50.2300 3 119 1.3E-35 T 09-03-2017 BV404_RS05800 c296c21d0b1df61d0ab24551152ef7c3 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 232 1.9E-20 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BV404_RS05800 c296c21d0b1df61d0ab24551152ef7c3 235 SUPERFAMILY SSF52172 2 122 1.99E-36 T 09-03-2017 IPR011006 CheY-like superfamily BV404_RS05800 c296c21d0b1df61d0ab24551152ef7c3 235 Gene3D G3DSA:1.10.10.10 134 233 4.6E-28 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS05800 c296c21d0b1df61d0ab24551152ef7c3 235 SMART SM00448 3 113 5.1E-37 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS00930 987e2811ffae0c9aeeddf6e4e23fbe37 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 8.0E-35 T 09-03-2017 IPR027486 Ribosomal protein S10 domain BV404_RS00930 987e2811ffae0c9aeeddf6e4e23fbe37 103 SMART SM01403 7 101 8.0E-56 T 09-03-2017 IPR027486 Ribosomal protein S10 domain BV404_RS00930 987e2811ffae0c9aeeddf6e4e23fbe37 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 09-03-2017 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS00930 987e2811ffae0c9aeeddf6e4e23fbe37 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.898 T 09-03-2017 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS00930 987e2811ffae0c9aeeddf6e4e23fbe37 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 3.3E-18 T 09-03-2017 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS00930 987e2811ffae0c9aeeddf6e4e23fbe37 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 3.3E-18 T 09-03-2017 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS00930 987e2811ffae0c9aeeddf6e4e23fbe37 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 3.3E-18 T 09-03-2017 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS00930 987e2811ffae0c9aeeddf6e4e23fbe37 103 Gene3D G3DSA:3.30.70.600 3 102 2.7E-43 T 09-03-2017 IPR027486 Ribosomal protein S10 domain BV404_RS00930 987e2811ffae0c9aeeddf6e4e23fbe37 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.1E-45 T 09-03-2017 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BV404_RS00930 987e2811ffae0c9aeeddf6e4e23fbe37 103 SUPERFAMILY SSF54999 5 101 1.7E-36 T 09-03-2017 IPR027486 Ribosomal protein S10 domain BV404_RS08465 3e21f024f03fd3723f3babe9a8ba9010 521 PIRSF PIRSF001373 3 521 1.4E-256 T 09-03-2017 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BV404_RS08465 3e21f024f03fd3723f3babe9a8ba9010 521 PRINTS PR00095 Anthranilate synthase component I signature 449 463 6.1E-23 T 09-03-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BV404_RS08465 3e21f024f03fd3723f3babe9a8ba9010 521 PRINTS PR00095 Anthranilate synthase component I signature 355 368 6.1E-23 T 09-03-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BV404_RS08465 3e21f024f03fd3723f3babe9a8ba9010 521 PRINTS PR00095 Anthranilate synthase component I signature 369 382 6.1E-23 T 09-03-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BV404_RS08465 3e21f024f03fd3723f3babe9a8ba9010 521 PRINTS PR00095 Anthranilate synthase component I signature 464 478 6.1E-23 T 09-03-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BV404_RS08465 3e21f024f03fd3723f3babe9a8ba9010 521 SUPERFAMILY SSF56322 15 518 2.22E-161 T 09-03-2017 IPR005801 ADC synthase GO:0009058 BV404_RS08465 3e21f024f03fd3723f3babe9a8ba9010 521 Pfam PF04715 Anthranilate synthase component I, N terminal region 24 197 1.4E-12 T 09-03-2017 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BV404_RS08465 3e21f024f03fd3723f3babe9a8ba9010 521 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 22 519 3.8E-229 T 09-03-2017 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BV404_RS08465 3e21f024f03fd3723f3babe9a8ba9010 521 Gene3D G3DSA:3.60.120.10 14 520 2.2E-161 T 09-03-2017 IPR005801 ADC synthase GO:0009058 BV404_RS08465 3e21f024f03fd3723f3babe9a8ba9010 521 Pfam PF00425 chorismate binding enzyme 247 507 2.9E-87 T 09-03-2017 IPR015890 Chorismate-utilising enzyme, C-terminal BV404_RS04855 e9397c0aaeb8e5300310a0f5c22a35d4 185 Pfam PF03358 NADPH-dependent FMN reductase 5 148 9.9E-29 T 09-03-2017 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 BV404_RS04855 e9397c0aaeb8e5300310a0f5c22a35d4 185 SUPERFAMILY SSF52218 5 175 9.19E-38 T 09-03-2017 IPR029039 Flavoprotein-like domain BV404_RS04855 e9397c0aaeb8e5300310a0f5c22a35d4 185 Gene3D G3DSA:3.40.50.360 1 181 3.7E-39 T 09-03-2017 IPR029039 Flavoprotein-like domain BV404_RS06440 2a2da7f6f15061bcbaa3dcdccdb02ebd 517 SUPERFAMILY SSF47090 193 267 5.76E-12 T 09-03-2017 IPR002477 Peptidoglycan binding-like BV404_RS06440 2a2da7f6f15061bcbaa3dcdccdb02ebd 517 Pfam PF03734 L,D-transpeptidase catalytic domain 290 458 2.0E-29 T 09-03-2017 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 BV404_RS06440 2a2da7f6f15061bcbaa3dcdccdb02ebd 517 Pfam PF01471 Putative peptidoglycan binding domain 227 263 2.7E-7 T 09-03-2017 IPR002477 Peptidoglycan binding-like BV404_RS06440 2a2da7f6f15061bcbaa3dcdccdb02ebd 517 SUPERFAMILY SSF141523 288 343 4.71E-19 T 09-03-2017 BV404_RS06440 2a2da7f6f15061bcbaa3dcdccdb02ebd 517 SUPERFAMILY SSF141523 399 450 4.71E-19 T 09-03-2017 BV404_RS06440 2a2da7f6f15061bcbaa3dcdccdb02ebd 517 Gene3D G3DSA:1.10.101.10 200 269 1.8E-11 T 09-03-2017 IPR002477 Peptidoglycan binding-like BV404_RS06440 2a2da7f6f15061bcbaa3dcdccdb02ebd 517 Gene3D G3DSA:2.40.440.10 401 450 9.3E-12 T 09-03-2017 BV404_RS06440 2a2da7f6f15061bcbaa3dcdccdb02ebd 517 Gene3D G3DSA:2.40.440.10 285 334 9.3E-12 T 09-03-2017 BV404_RS06675 27c3cb1b8566dca85d316933c6aad3ea 162 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 9 90 7.1E-16 T 09-03-2017 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis BV404_RS06675 27c3cb1b8566dca85d316933c6aad3ea 162 SUPERFAMILY SSF53146 1 99 7.59E-21 T 09-03-2017 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis BV404_RS06675 27c3cb1b8566dca85d316933c6aad3ea 162 Gene3D G3DSA:3.30.420.130 1 90 5.4E-18 T 09-03-2017 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis BV404_RS12525 f1c3a2070117a75eb99c401a318c67e7 481 SUPERFAMILY SSF111283 18 480 1.7E-128 T 09-03-2017 BV404_RS12525 f1c3a2070117a75eb99c401a318c67e7 481 PIRSF PIRSF004919 15 481 5.5E-143 T 09-03-2017 IPR025502 TldD BV404_RS12525 f1c3a2070117a75eb99c401a318c67e7 481 Pfam PF01523 Putative modulator of DNA gyrase 35 332 3.8E-62 T 09-03-2017 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 BV404_RS07020 4183d7515d9a3bc3138d94c74072afbc 782 Gene3D G3DSA:3.40.50.300 458 588 4.7E-8 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS07020 4183d7515d9a3bc3138d94c74072afbc 782 SUPERFAMILY SSF52540 457 635 6.99E-12 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS14550 7611e8a03165bac904b74c406008710e 202 SUPERFAMILY SSF55718 15 117 2.28E-11 T 09-03-2017 IPR003033 SCP2 sterol-binding domain BV404_RS14550 7611e8a03165bac904b74c406008710e 202 Pfam PF02036 SCP-2 sterol transfer family 15 111 7.5E-24 T 09-03-2017 IPR003033 SCP2 sterol-binding domain BV404_RS14550 7611e8a03165bac904b74c406008710e 202 Gene3D G3DSA:3.30.1050.10 19 116 9.9E-7 T 09-03-2017 IPR003033 SCP2 sterol-binding domain BV404_RS12675 a56b837e4cddf8b380c33ed5235ec4f9 373 Pfam PF00266 Aminotransferase class-V 13 339 4.7E-38 T 09-03-2017 IPR000192 Aminotransferase class V domain BV404_RS12675 a56b837e4cddf8b380c33ed5235ec4f9 373 Gene3D G3DSA:3.40.640.10 23 267 5.4E-61 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 BV404_RS12675 a56b837e4cddf8b380c33ed5235ec4f9 373 SUPERFAMILY SSF53383 9 371 1.75E-105 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase BV404_RS12675 a56b837e4cddf8b380c33ed5235ec4f9 373 PIRSF PIRSF000524 5 373 8.7E-112 T 09-03-2017 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661 BV404_RS12675 a56b837e4cddf8b380c33ed5235ec4f9 373 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 209 - T 09-03-2017 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site BV404_RS12675 a56b837e4cddf8b380c33ed5235ec4f9 373 Gene3D G3DSA:3.90.1150.10 268 372 4.8E-38 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 BV404_RS05480 b43fcaac33b07b3d382cce1f7b59f19c 206 Gene3D G3DSA:3.10.450.50 165 206 8.2E-12 T 09-03-2017 IPR032710 NTF2-like domain BV404_RS05480 b43fcaac33b07b3d382cce1f7b59f19c 206 SUPERFAMILY SSF103642 186 205 1.42E-7 T 09-03-2017 BV404_RS05480 b43fcaac33b07b3d382cce1f7b59f19c 206 Pfam PF02810 SEC-C motif 188 206 3.5E-10 T 09-03-2017 IPR004027 SEC-C motif BV404_RS05480 b43fcaac33b07b3d382cce1f7b59f19c 206 Pfam PF03695 Uncharacterised protein family (UPF0149) 8 162 3.0E-9 T 09-03-2017 IPR011978 Uncharacterised protein family UPF0149 BV404_RS05480 b43fcaac33b07b3d382cce1f7b59f19c 206 SUPERFAMILY SSF101327 9 142 3.14E-6 T 09-03-2017 IPR011978 Uncharacterised protein family UPF0149 BV404_RS10880 343419820fc9cd417037189055758e51 294 SUPERFAMILY SSF55186 124 272 4.71E-13 T 09-03-2017 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 BV404_RS03945 d2c950131940ef509b029199c5c86ff7 168 Pfam PF10975 Protein of unknown function (DUF2802) 68 135 1.7E-22 T 09-03-2017 IPR021244 Protein of unknown function DUF2802 BV404_RS10855 2fda2d6ef000755631e8c8e863126c4a 556 Pfam PF02839 Carbohydrate binding domain 435 473 4.9E-13 T 09-03-2017 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 BV404_RS10855 2fda2d6ef000755631e8c8e863126c4a 556 Gene3D G3DSA:1.10.530.10 87 154 2.6E-54 T 09-03-2017 BV404_RS10855 2fda2d6ef000755631e8c8e863126c4a 556 Gene3D G3DSA:1.10.530.10 211 349 2.6E-54 T 09-03-2017 BV404_RS10855 2fda2d6ef000755631e8c8e863126c4a 556 Pfam PF00182 Chitinase class I 106 326 1.4E-31 T 09-03-2017 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 BV404_RS10855 2fda2d6ef000755631e8c8e863126c4a 556 SUPERFAMILY SSF53955 87 350 3.66E-53 T 09-03-2017 IPR023346 Lysozyme-like domain BV404_RS10855 2fda2d6ef000755631e8c8e863126c4a 556 SUPERFAMILY SSF51055 435 476 1.57E-13 T 09-03-2017 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 BV404_RS10855 2fda2d6ef000755631e8c8e863126c4a 556 SMART SM00495 434 476 7.7E-12 T 09-03-2017 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 BV404_RS10855 2fda2d6ef000755631e8c8e863126c4a 556 SMART SM00495 508 553 0.38 T 09-03-2017 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 BV404_RS10855 2fda2d6ef000755631e8c8e863126c4a 556 Gene3D G3DSA:2.10.10.20 435 477 1.2E-16 T 09-03-2017 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 BV404_RS08700 37e3c5e67ba3ef11b5b48a4b98898578 88 Gene3D G3DSA:3.40.30.10 2 81 1.1E-26 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS08700 37e3c5e67ba3ef11b5b48a4b98898578 88 SUPERFAMILY SSF52833 3 81 2.4E-21 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS08700 37e3c5e67ba3ef11b5b48a4b98898578 88 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 85 3.2E-49 T 09-03-2017 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 BV404_RS08700 37e3c5e67ba3ef11b5b48a4b98898578 88 PRINTS PR00160 Glutaredoxin signature 3 21 1.7E-11 T 09-03-2017 IPR014025 Glutaredoxin subgroup BV404_RS08700 37e3c5e67ba3ef11b5b48a4b98898578 88 PRINTS PR00160 Glutaredoxin signature 66 79 1.7E-11 T 09-03-2017 IPR014025 Glutaredoxin subgroup BV404_RS08700 37e3c5e67ba3ef11b5b48a4b98898578 88 PRINTS PR00160 Glutaredoxin signature 52 65 1.7E-11 T 09-03-2017 IPR014025 Glutaredoxin subgroup BV404_RS08700 37e3c5e67ba3ef11b5b48a4b98898578 88 Pfam PF00462 Glutaredoxin 3 69 8.6E-17 T 09-03-2017 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 BV404_RS06225 dfcc2da15e3f979ebe82b3b795c75f84 328 Pfam PF12710 haloacid dehalogenase-like hydrolase 66 267 2.1E-21 T 09-03-2017 BV404_RS06225 dfcc2da15e3f979ebe82b3b795c75f84 328 SUPERFAMILY SSF56784 64 310 5.75E-26 T 09-03-2017 IPR023214 HAD-like domain BV404_RS06225 dfcc2da15e3f979ebe82b3b795c75f84 328 Gene3D G3DSA:3.40.50.1000 159 301 1.6E-15 T 09-03-2017 IPR023214 HAD-like domain BV404_RS06225 dfcc2da15e3f979ebe82b3b795c75f84 328 Gene3D G3DSA:3.40.50.1000 64 79 1.6E-15 T 09-03-2017 IPR023214 HAD-like domain BV404_RS04135 161c20fc8cc10f9fd272e97b4ad253f4 160 Gene3D G3DSA:3.90.79.10 3 130 2.7E-24 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 BV404_RS04135 161c20fc8cc10f9fd272e97b4ad253f4 160 SUPERFAMILY SSF55811 4 127 4.33E-23 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 BV404_RS04135 161c20fc8cc10f9fd272e97b4ad253f4 160 Pfam PF00293 NUDIX domain 5 122 2.2E-15 T 09-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 BV404_RS01725 cc33953e67ac11fc5a692a6f9245784d 209 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 140 192 4.8E-21 T 09-03-2017 IPR005573 Anti sigma-E protein RseA, C-terminal BV404_RS01725 cc33953e67ac11fc5a692a6f9245784d 209 PIRSF PIRSF016938 1 201 5.5E-34 T 09-03-2017 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0006950|GO:0016989 BV404_RS01725 cc33953e67ac11fc5a692a6f9245784d 209 SUPERFAMILY SSF89069 4 67 8.11E-21 T 09-03-2017 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 BV404_RS01725 cc33953e67ac11fc5a692a6f9245784d 209 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 98 8.5E-34 T 09-03-2017 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 BV404_RS14380 fc17e591e3ed639a0276129a90669377 370 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 256 358 1.5E-23 T 09-03-2017 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 BV404_RS14380 fc17e591e3ed639a0276129a90669377 370 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 3 366 1.9E-170 T 09-03-2017 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 BV404_RS14380 fc17e591e3ed639a0276129a90669377 370 Pfam PF04055 Radical SAM superfamily 81 220 5.0E-10 T 09-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 BV404_RS14380 fc17e591e3ed639a0276129a90669377 370 SUPERFAMILY SSF102114 37 343 5.49E-53 T 09-03-2017 BV404_RS14380 fc17e591e3ed639a0276129a90669377 370 SMART SM00876 256 359 2.7E-30 T 09-03-2017 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 BV404_RS14380 fc17e591e3ed639a0276129a90669377 370 Gene3D G3DSA:3.20.20.70 37 358 3.5E-46 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS13775 7b0858a8f8a6b14eec487b47877dee90 634 Pfam PF04632 Fusaric acid resistance protein family 14 615 6.0E-100 T 09-03-2017 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 BV404_RS12510 cc65572297da1e798fe3435f955304b7 129 Pfam PF09834 Predicted membrane protein (DUF2061) 66 116 4.8E-22 T 09-03-2017 IPR018638 Domain of unknown function DUF2061, membrane BV404_RS12510 cc65572297da1e798fe3435f955304b7 129 Pfam PF09834 Predicted membrane protein (DUF2061) 1 52 3.8E-22 T 09-03-2017 IPR018638 Domain of unknown function DUF2061, membrane BV404_RS05195 f578e0ebc4acc47fa02cac2160314691 284 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 13 270 8.4E-100 T 09-03-2017 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BV404_RS05195 f578e0ebc4acc47fa02cac2160314691 284 SUPERFAMILY SSF53613 9 272 2.34E-81 T 09-03-2017 IPR029056 Ribokinase-like BV404_RS05195 f578e0ebc4acc47fa02cac2160314691 284 Pfam PF08543 Phosphomethylpyrimidine kinase 20 268 2.9E-93 T 09-03-2017 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-964975 BV404_RS05195 f578e0ebc4acc47fa02cac2160314691 284 Gene3D G3DSA:3.40.1190.20 11 270 5.2E-100 T 09-03-2017 IPR029056 Ribokinase-like BV404_RS12935 86f85af1c50413ea303d6721e610a67c 87 Gene3D G3DSA:2.30.30.100 1 74 3.0E-38 T 09-03-2017 BV404_RS12935 86f85af1c50413ea303d6721e610a67c 87 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.727 T 09-03-2017 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 BV404_RS12935 86f85af1c50413ea303d6721e610a67c 87 SUPERFAMILY SSF50182 7 69 1.19E-24 T 09-03-2017 IPR010920 LSM domain BV404_RS12935 86f85af1c50413ea303d6721e610a67c 87 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 6.8E-30 T 09-03-2017 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 BV404_RS06215 9868c24c843e84cddd0958affd560d08 563 Gene3D G3DSA:3.40.50.410 100 263 3.0E-7 T 09-03-2017 IPR002035 von Willebrand factor, type A BV404_RS06215 9868c24c843e84cddd0958affd560d08 563 Pfam PF13519 von Willebrand factor type A domain 102 207 3.5E-12 T 09-03-2017 IPR002035 von Willebrand factor, type A BV404_RS06215 9868c24c843e84cddd0958affd560d08 563 SMART SM00327 99 277 5.2E-5 T 09-03-2017 IPR002035 von Willebrand factor, type A BV404_RS06215 9868c24c843e84cddd0958affd560d08 563 SUPERFAMILY SSF53300 99 276 4.08E-18 T 09-03-2017 IPR002035 von Willebrand factor, type A BV404_RS07635 22e1874e0b0e8427feaac5f343ea5c92 251 PIRSF PIRSF039085 7 250 7.9E-112 T 09-03-2017 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 BV404_RS07635 22e1874e0b0e8427feaac5f343ea5c92 251 Pfam PF00005 ABC transporter 26 174 1.9E-39 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS07635 22e1874e0b0e8427feaac5f343ea5c92 251 Gene3D G3DSA:3.40.50.300 10 245 1.6E-86 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS07635 22e1874e0b0e8427feaac5f343ea5c92 251 SMART SM00382 35 222 1.9E-14 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS07635 22e1874e0b0e8427feaac5f343ea5c92 251 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS07635 22e1874e0b0e8427feaac5f343ea5c92 251 SUPERFAMILY SSF52540 10 244 1.39E-82 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS12605 fedc12f8cb7030c9e3cdec9a5d338d65 407 Pfam PF00482 Type II secretion system (T2SS), protein F 274 396 1.9E-27 T 09-03-2017 IPR018076 Type II secretion system F domain BV404_RS12605 fedc12f8cb7030c9e3cdec9a5d338d65 407 Pfam PF00482 Type II secretion system (T2SS), protein F 71 194 1.5E-28 T 09-03-2017 IPR018076 Type II secretion system F domain BV404_RS12605 fedc12f8cb7030c9e3cdec9a5d338d65 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 4.7E-9 T 09-03-2017 IPR003004 GspF/PilC family BV404_RS12605 fedc12f8cb7030c9e3cdec9a5d338d65 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 4.7E-9 T 09-03-2017 IPR003004 GspF/PilC family BV404_RS12605 fedc12f8cb7030c9e3cdec9a5d338d65 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 4.7E-9 T 09-03-2017 IPR003004 GspF/PilC family BV404_RS12605 fedc12f8cb7030c9e3cdec9a5d338d65 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 4.7E-9 T 09-03-2017 IPR003004 GspF/PilC family BV404_RS03220 c3239110f7d8cde841476620fc8a7d91 314 SMART SM00047 152 312 7.3E-48 T 09-03-2017 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 BV404_RS03220 c3239110f7d8cde841476620fc8a7d91 314 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 172 308 2.0E-19 T 09-03-2017 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 BV404_RS03220 c3239110f7d8cde841476620fc8a7d91 314 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 10 308 6.9E-104 T 09-03-2017 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 BV404_RS03220 c3239110f7d8cde841476620fc8a7d91 314 PRINTS PR01002 Flagellar protein FlgJ signature 248 269 7.0E-28 T 09-03-2017 BV404_RS03220 c3239110f7d8cde841476620fc8a7d91 314 PRINTS PR01002 Flagellar protein FlgJ signature 291 309 7.0E-28 T 09-03-2017 BV404_RS03220 c3239110f7d8cde841476620fc8a7d91 314 PRINTS PR01002 Flagellar protein FlgJ signature 79 101 7.0E-28 T 09-03-2017 BV404_RS03220 c3239110f7d8cde841476620fc8a7d91 314 PRINTS PR01002 Flagellar protein FlgJ signature 31 54 7.0E-28 T 09-03-2017 BV404_RS03220 c3239110f7d8cde841476620fc8a7d91 314 PRINTS PR01002 Flagellar protein FlgJ signature 185 203 7.0E-28 T 09-03-2017 BV404_RS03220 c3239110f7d8cde841476620fc8a7d91 314 PRINTS PR01002 Flagellar protein FlgJ signature 226 247 7.0E-28 T 09-03-2017 BV404_RS03220 c3239110f7d8cde841476620fc8a7d91 314 Pfam PF10135 Rod binding protein 53 102 5.3E-15 T 09-03-2017 IPR019301 Flagellar protein FlgJ, N-terminal BV404_RS07360 454a8e850604806befb69b858931bc4a 209 SUPERFAMILY SSF48657 5 117 3.79E-38 T 09-03-2017 IPR016103 ProQ/FinO domain BV404_RS07360 454a8e850604806befb69b858931bc4a 209 Hamap MF_00749 RNA chaperone ProQ [proQ]. 3 209 29.949 T 09-03-2017 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 BV404_RS07360 454a8e850604806befb69b858931bc4a 209 Pfam PF04352 ProQ/FINO family 8 115 1.1E-41 T 09-03-2017 IPR016103 ProQ/FinO domain BV404_RS07360 454a8e850604806befb69b858931bc4a 209 SMART SM00945 5 119 1.3E-60 T 09-03-2017 IPR016103 ProQ/FinO domain BV404_RS07360 454a8e850604806befb69b858931bc4a 209 Gene3D G3DSA:1.10.1710.10 3 118 1.6E-36 T 09-03-2017 IPR016103 ProQ/FinO domain BV404_RS11275 6a90fbb5d49d5f81d855230c1676cc3d 322 Pfam PF00482 Type II secretion system (T2SS), protein F 155 279 2.5E-17 T 09-03-2017 IPR018076 Type II secretion system F domain BV404_RS05430 74370f2f0bdddad36dddbe8cd43ddae7 425 Pfam PF13194 Domain of unknown function (DUF4010) 189 398 1.6E-64 T 09-03-2017 IPR025105 Domain of unknown function DUF4010 BV404_RS05430 74370f2f0bdddad36dddbe8cd43ddae7 425 Pfam PF02308 MgtC family 16 141 3.6E-19 T 09-03-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 BV404_RS11100 355636288b083a26ae2f42e3f640601f 84 SUPERFAMILY SSF54862 5 72 4.89E-17 T 09-03-2017 BV404_RS11100 355636288b083a26ae2f42e3f640601f 84 Pfam PF00037 4Fe-4S binding domain 6 25 2.9E-6 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BV404_RS11100 355636288b083a26ae2f42e3f640601f 84 Gene3D G3DSA:3.30.70.20 5 72 1.2E-16 T 09-03-2017 BV404_RS11100 355636288b083a26ae2f42e3f640601f 84 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BV404_RS05520 07e23a4d7f223ef606f35ff147d2ad9c 194 SUPERFAMILY SSF52172 7 186 2.98E-24 T 09-03-2017 IPR011006 CheY-like superfamily BV404_RS05520 07e23a4d7f223ef606f35ff147d2ad9c 194 Pfam PF03861 ANTAR domain 134 186 3.7E-19 T 09-03-2017 IPR005561 ANTAR domain GO:0003723 BV404_RS05520 07e23a4d7f223ef606f35ff147d2ad9c 194 SMART SM01012 131 186 6.1E-20 T 09-03-2017 IPR005561 ANTAR domain GO:0003723 BV404_RS05520 07e23a4d7f223ef606f35ff147d2ad9c 194 Gene3D G3DSA:1.10.10.10 134 190 1.6E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS01790 65508b1f738ae0ea7c73fa01786c51dc 265 Gene3D G3DSA:1.10.287.1080 20 73 4.6E-7 T 09-03-2017 BV404_RS01790 65508b1f738ae0ea7c73fa01786c51dc 265 Gene3D G3DSA:1.10.287.1080 134 224 8.9E-12 T 09-03-2017 BV404_RS01790 65508b1f738ae0ea7c73fa01786c51dc 265 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 171 229 3.5E-7 T 09-03-2017 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core BV404_RS01790 65508b1f738ae0ea7c73fa01786c51dc 265 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 28 101 2.5E-27 T 09-03-2017 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core BV404_RS01790 65508b1f738ae0ea7c73fa01786c51dc 265 TIGRFAM TIGR00444 mazG: MazG family protein 11 260 3.9E-106 T 09-03-2017 IPR011551 NTP pyrophosphohydrolase MazG BV404_RS01790 65508b1f738ae0ea7c73fa01786c51dc 265 SUPERFAMILY SSF101386 139 240 3.74E-24 T 09-03-2017 BV404_RS01790 65508b1f738ae0ea7c73fa01786c51dc 265 SUPERFAMILY SSF101386 3 105 7.1E-24 T 09-03-2017 BV404_RS08725 aace68b554babbbca829533ef50bb255 303 Gene3D G3DSA:3.40.50.1100 113 292 4.5E-15 T 09-03-2017 BV404_RS08725 aace68b554babbbca829533ef50bb255 303 SUPERFAMILY SSF53686 6 293 7.59E-49 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme BV404_RS08725 aace68b554babbbca829533ef50bb255 303 PIRSF PIRSF006278 2 299 1.0E-21 T 09-03-2017 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase BV404_RS08725 aace68b554babbbca829533ef50bb255 303 Gene3D G3DSA:3.40.50.1100 33 111 5.3E-5 T 09-03-2017 BV404_RS12955 b3b66aa4835443876bf66645d0c2cf76 154 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 133 6.9E-42 T 09-03-2017 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 BV404_RS12955 b3b66aa4835443876bf66645d0c2cf76 154 Gene3D G3DSA:3.40.50.300 4 151 9.3E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS12955 b3b66aa4835443876bf66645d0c2cf76 154 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 139 6.8E-51 T 09-03-2017 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 BV404_RS12955 b3b66aa4835443876bf66645d0c2cf76 154 SUPERFAMILY SSF52540 29 131 1.05E-21 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS02185 81af610a73efc09b5cb7e16572c14abd 133 Pfam PF04304 Protein of unknown function (DUF454) 9 121 2.5E-33 T 09-03-2017 IPR007401 Protein of unknown function DUF454 BV404_RS02185 81af610a73efc09b5cb7e16572c14abd 133 PIRSF PIRSF016789 5 126 1.3E-31 T 09-03-2017 IPR007401 Protein of unknown function DUF454 BV404_RS03030 712aba1a611dbedc8b9b598bcf3f3b17 814 Gene3D G3DSA:2.40.110.10 238 348 4.4E-15 T 09-03-2017 BV404_RS03030 712aba1a611dbedc8b9b598bcf3f3b17 814 Gene3D G3DSA:1.10.540.10 96 235 5.8E-31 T 09-03-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 BV404_RS03030 712aba1a611dbedc8b9b598bcf3f3b17 814 SUPERFAMILY SSF47203 361 508 1.19E-24 T 09-03-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 BV404_RS03030 712aba1a611dbedc8b9b598bcf3f3b17 814 Pfam PF09317 Domain of unknown function (DUF1974) 515 796 1.1E-113 T 09-03-2017 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 BV404_RS03030 712aba1a611dbedc8b9b598bcf3f3b17 814 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 361 508 1.9E-15 T 09-03-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 BV404_RS03030 712aba1a611dbedc8b9b598bcf3f3b17 814 Gene3D G3DSA:1.20.140.10 349 508 9.5E-26 T 09-03-2017 BV404_RS03030 712aba1a611dbedc8b9b598bcf3f3b17 814 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 145 234 3.8E-16 T 09-03-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 BV404_RS03030 712aba1a611dbedc8b9b598bcf3f3b17 814 SUPERFAMILY SSF56645 121 356 1.96E-43 T 09-03-2017 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 BV404_RS13760 8ce49a1bd744113602c4398588715bc6 279 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 41.323 T 09-03-2017 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 BV404_RS13760 8ce49a1bd744113602c4398588715bc6 279 SUPERFAMILY SSF53335 9 275 3.21E-96 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS13760 8ce49a1bd744113602c4398588715bc6 279 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 241 247 - T 09-03-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BV404_RS13760 8ce49a1bd744113602c4398588715bc6 279 Gene3D G3DSA:3.40.50.150 1 279 2.6E-116 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS13760 8ce49a1bd744113602c4398588715bc6 279 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 277 3.9E-117 T 09-03-2017 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 BV404_RS13760 8ce49a1bd744113602c4398588715bc6 279 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 161 167 - T 09-03-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BV404_RS11310 a55b828ae139b3a8f3224a1a445ad14f 488 Pfam PF00263 Bacterial type II and III secretion system protein 260 422 2.9E-40 T 09-03-2017 IPR004846 Type II/III secretion system GO:0009306 BV404_RS11310 a55b828ae139b3a8f3224a1a445ad14f 488 PRINTS PR00811 Bacterial general secretion pathway protein D signature 177 187 3.9E-12 T 09-03-2017 IPR001775 GspD/PilQ family BV404_RS11310 a55b828ae139b3a8f3224a1a445ad14f 488 PRINTS PR00811 Bacterial general secretion pathway protein D signature 254 278 3.9E-12 T 09-03-2017 IPR001775 GspD/PilQ family BV404_RS11310 a55b828ae139b3a8f3224a1a445ad14f 488 PRINTS PR00811 Bacterial general secretion pathway protein D signature 388 406 3.9E-12 T 09-03-2017 IPR001775 GspD/PilQ family BV404_RS11310 a55b828ae139b3a8f3224a1a445ad14f 488 PRINTS PR00811 Bacterial general secretion pathway protein D signature 411 425 3.9E-12 T 09-03-2017 IPR001775 GspD/PilQ family BV404_RS11310 a55b828ae139b3a8f3224a1a445ad14f 488 Pfam PF13629 Pilus formation protein N terminal region 25 94 7.0E-21 T 09-03-2017 IPR032789 Pilus formation protein, N-terminal BV404_RS07600 863d3e83d6f86bcea11b4ac141977be5 229 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 205 4.0E-83 T 09-03-2017 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 BV404_RS07600 863d3e83d6f86bcea11b4ac141977be5 229 PIRSF PIRSF006293 1 224 3.5E-82 T 09-03-2017 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 BV404_RS07600 863d3e83d6f86bcea11b4ac141977be5 229 Gene3D G3DSA:3.40.50.620 1 212 7.3E-84 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS07600 863d3e83d6f86bcea11b4ac141977be5 229 SUPERFAMILY SSF52402 1 211 3.31E-67 T 09-03-2017 BV404_RS07600 863d3e83d6f86bcea11b4ac141977be5 229 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 218 50.657 T 09-03-2017 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 BV404_RS07600 863d3e83d6f86bcea11b4ac141977be5 229 Pfam PF06508 Queuosine biosynthesis protein QueC 3 212 8.4E-85 T 09-03-2017 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 BV404_RS19695 d9cb507178dc0f6aaa0820ef22de7b51 297 SUPERFAMILY SSF53706 5 282 9.06E-28 T 09-03-2017 BV404_RS19695 d9cb507178dc0f6aaa0820ef22de7b51 297 Gene3D G3DSA:3.40.50.740 103 123 5.9E-12 T 09-03-2017 BV404_RS19695 d9cb507178dc0f6aaa0820ef22de7b51 297 Gene3D G3DSA:3.40.50.740 4 71 5.9E-12 T 09-03-2017 BV404_RS05475 5f9c5f14bb5cb66017f74ffdb24901ac 183 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 1 24 9.4E-8 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site BV404_RS05475 5f9c5f14bb5cb66017f74ffdb24901ac 183 Gene3D G3DSA:3.30.700.10 7 58 1.5E-8 T 09-03-2017 BV404_RS05475 5f9c5f14bb5cb66017f74ffdb24901ac 183 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 26 8.7E-8 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site BV404_RS05475 5f9c5f14bb5cb66017f74ffdb24901ac 183 SUPERFAMILY SSF54523 7 139 8.63E-17 T 09-03-2017 BV404_RS09625 c409b1adf11a91844d272d777664bcb6 704 Pfam PF05170 AsmA family 2 594 2.7E-139 T 09-03-2017 IPR007844 AsmA BV404_RS03145 9614108d511a4a3c78f01e25b0c37707 211 PIRSF PIRSF028688 1 211 1.7E-118 T 09-03-2017 IPR014549 Flagellar protein FlgO BV404_RS12590 c1fdd283ce2a2da96d1588cbe6a0c148 159 SUPERFAMILY SSF54523 7 126 5.1E-13 T 09-03-2017 BV404_RS12590 c1fdd283ce2a2da96d1588cbe6a0c148 159 Pfam PF13633 Prokaryotic N-terminal methylation site 4 28 8.8E-9 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site BV404_RS12590 c1fdd283ce2a2da96d1588cbe6a0c148 159 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site BV404_RS12590 c1fdd283ce2a2da96d1588cbe6a0c148 159 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 7.6E-8 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site BV404_RS12590 c1fdd283ce2a2da96d1588cbe6a0c148 159 Gene3D G3DSA:3.30.700.10 7 65 3.7E-5 T 09-03-2017 BV404_RS07845 2e5fd0c72e75e5d453f70cbdff306df7 477 Pfam PF02321 Outer membrane efflux protein 26 241 4.0E-21 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 BV404_RS07845 2e5fd0c72e75e5d453f70cbdff306df7 477 Pfam PF02321 Outer membrane efflux protein 264 443 1.9E-25 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 BV404_RS07845 2e5fd0c72e75e5d453f70cbdff306df7 477 Gene3D G3DSA:1.20.1600.10 20 442 1.2E-51 T 09-03-2017 BV404_RS07845 2e5fd0c72e75e5d453f70cbdff306df7 477 SUPERFAMILY SSF56954 2 77 6.93E-68 T 09-03-2017 BV404_RS07845 2e5fd0c72e75e5d453f70cbdff306df7 477 SUPERFAMILY SSF56954 105 444 6.93E-68 T 09-03-2017 BV404_RS03895 31226e5bd5d4e7db935694a64f21c12e 498 SMART SM00382 284 422 5.7E-7 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS03895 31226e5bd5d4e7db935694a64f21c12e 498 Pfam PF00448 SRP54-type protein, GTPase domain 287 475 2.4E-38 T 09-03-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BV404_RS03895 31226e5bd5d4e7db935694a64f21c12e 498 SMART SM00962 285 478 4.1E-65 T 09-03-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BV404_RS03895 31226e5bd5d4e7db935694a64f21c12e 498 Gene3D G3DSA:3.40.50.300 284 475 1.1E-44 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS03895 31226e5bd5d4e7db935694a64f21c12e 498 SUPERFAMILY SSF52540 281 473 4.24E-34 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS03895 31226e5bd5d4e7db935694a64f21c12e 498 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 2 373 3.6E-86 T 09-03-2017 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 BV404_RS13585 4fa7b9c055c9b6f6c2c096c0868746cc 638 SUPERFAMILY SSF53649 253 553 3.36E-23 T 09-03-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 BV404_RS13585 4fa7b9c055c9b6f6c2c096c0868746cc 638 Pfam PF00884 Sulfatase 254 544 6.8E-23 T 09-03-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 BV404_RS13585 4fa7b9c055c9b6f6c2c096c0868746cc 638 Gene3D G3DSA:3.40.720.10 254 546 1.2E-18 T 09-03-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 BV404_RS11745 fe5c2988cacfa7f6c67469a45058994a 245 Pfam PF02167 Cytochrome C1 family 34 244 4.1E-16 T 09-03-2017 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 BV404_RS11745 fe5c2988cacfa7f6c67469a45058994a 245 Gene3D G3DSA:1.20.5.100 214 245 1.9E-9 T 09-03-2017 BV404_RS11745 fe5c2988cacfa7f6c67469a45058994a 245 Gene3D G3DSA:1.10.760.10 16 210 9.9E-63 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 BV404_RS11745 fe5c2988cacfa7f6c67469a45058994a 245 SUPERFAMILY SSF46626 16 209 3.76E-49 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 BV404_RS02195 de8a5a64d4e75408b1b9ef51957bd258 480 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 61 439 4.9E-96 T 09-03-2017 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BV404_RS02195 de8a5a64d4e75408b1b9ef51957bd258 480 SUPERFAMILY SSF56601 32 462 9.78E-80 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like BV404_RS02195 de8a5a64d4e75408b1b9ef51957bd258 480 Gene3D G3DSA:3.40.710.10 221 446 1.2E-54 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like BV404_RS02195 de8a5a64d4e75408b1b9ef51957bd258 480 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 35 432 3.7E-99 T 09-03-2017 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BV404_RS02195 de8a5a64d4e75408b1b9ef51957bd258 480 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 280 302 1.0E-23 T 09-03-2017 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BV404_RS02195 de8a5a64d4e75408b1b9ef51957bd258 480 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 354 368 1.0E-23 T 09-03-2017 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BV404_RS02195 de8a5a64d4e75408b1b9ef51957bd258 480 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 418 431 1.0E-23 T 09-03-2017 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BV404_RS02195 de8a5a64d4e75408b1b9ef51957bd258 480 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 62 81 1.0E-23 T 09-03-2017 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BV404_RS02195 de8a5a64d4e75408b1b9ef51957bd258 480 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 339 353 1.0E-23 T 09-03-2017 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BV404_RS12785 636d37a5528573c25e921eeecf0efbf7 69 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 1 64 4.9E-23 T 09-03-2017 IPR014318 Phage shock protein, PspG BV404_RS12785 636d37a5528573c25e921eeecf0efbf7 69 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 2 64 6.2E-18 T 09-03-2017 IPR014318 Phage shock protein, PspG BV404_RS20715 0dd4209024b763a970a55e5a8e8969f1 114 SUPERFAMILY SSF82866 2 111 1.44E-21 T 09-03-2017 BV404_RS20715 0dd4209024b763a970a55e5a8e8969f1 114 Pfam PF00873 AcrB/AcrD/AcrF family 3 110 3.1E-20 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS20715 0dd4209024b763a970a55e5a8e8969f1 114 Gene3D G3DSA:1.20.1640.10 2 111 2.1E-24 T 09-03-2017 BV404_RS20715 0dd4209024b763a970a55e5a8e8969f1 114 PRINTS PR00702 Acriflavin resistance protein family signature 15 36 3.1E-12 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS20715 0dd4209024b763a970a55e5a8e8969f1 114 PRINTS PR00702 Acriflavin resistance protein family signature 43 67 3.1E-12 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS20715 0dd4209024b763a970a55e5a8e8969f1 114 PRINTS PR00702 Acriflavin resistance protein family signature 96 114 3.1E-12 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS13965 640191417f93f9c522aaf71e28a471af 371 SUPERFAMILY SSF102405 81 286 8.9E-43 T 09-03-2017 BV404_RS13965 640191417f93f9c522aaf71e28a471af 371 Gene3D G3DSA:3.40.50.450 112 257 4.7E-13 T 09-03-2017 BV404_RS13965 640191417f93f9c522aaf71e28a471af 371 Pfam PF02481 DNA recombination-mediator protein A 76 278 5.2E-79 T 09-03-2017 IPR003488 DNA recombination-mediator protein A GO:0009294 BV404_RS13965 640191417f93f9c522aaf71e28a471af 371 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 73 286 8.0E-76 T 09-03-2017 IPR003488 DNA recombination-mediator protein A GO:0009294 BV404_RS03480 096c70743d738ecd5c00c0a1d3e4c633 115 Pfam PF03960 ArsC family 6 111 7.4E-18 T 09-03-2017 IPR006660 Arsenate reductase-like BV404_RS03480 096c70743d738ecd5c00c0a1d3e4c633 115 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 112 1.4E-32 T 09-03-2017 IPR006504 Transcriptional regulator Spx/MgsR BV404_RS03480 096c70743d738ecd5c00c0a1d3e4c633 115 SUPERFAMILY SSF52833 2 114 3.13E-36 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS03480 096c70743d738ecd5c00c0a1d3e4c633 115 Gene3D G3DSA:3.40.30.10 2 114 6.6E-45 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS11320 9752323035cd3b06c0996dbe1ed3e464 450 SMART SM00382 173 365 7.6E-4 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS11320 9752323035cd3b06c0996dbe1ed3e464 450 SUPERFAMILY SSF52540 154 200 1.35E-18 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11320 9752323035cd3b06c0996dbe1ed3e464 450 SUPERFAMILY SSF52540 251 438 1.35E-18 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11320 9752323035cd3b06c0996dbe1ed3e464 450 Gene3D G3DSA:3.40.50.300 154 207 4.7E-12 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11320 9752323035cd3b06c0996dbe1ed3e464 450 Gene3D G3DSA:3.40.50.300 258 376 4.7E-12 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS11565 aadb6a6043083f57523ef2ddb31d4fbd 317 Pfam PF03186 CobD/Cbib protein 19 283 2.2E-35 T 09-03-2017 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 BV404_RS04965 4c1dc194de76d84316f0d01edbec1f30 530 Pfam PF08019 Domain of unknown function (DUF1705) 44 195 8.8E-43 T 09-03-2017 IPR012549 Domain of unknown function DUF1705 GO:0016021 BV404_RS04965 4c1dc194de76d84316f0d01edbec1f30 530 Gene3D G3DSA:3.40.720.10 323 511 4.7E-14 T 09-03-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 BV404_RS04965 4c1dc194de76d84316f0d01edbec1f30 530 Pfam PF00884 Sulfatase 222 511 9.1E-45 T 09-03-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 BV404_RS04965 4c1dc194de76d84316f0d01edbec1f30 530 SUPERFAMILY SSF53649 286 511 1.18E-18 T 09-03-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 BV404_RS03210 b94dbe11ee2ad7c3fb0d1a8a4380b60c 260 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 260 27.987 T 09-03-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BV404_RS03210 b94dbe11ee2ad7c3fb0d1a8a4380b60c 260 Pfam PF02107 Flagellar L-ring protein 82 257 2.8E-57 T 09-03-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BV404_RS03210 b94dbe11ee2ad7c3fb0d1a8a4380b60c 260 PRINTS PR01008 Flagellar L-ring protein signature 202 218 1.8E-21 T 09-03-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BV404_RS03210 b94dbe11ee2ad7c3fb0d1a8a4380b60c 260 PRINTS PR01008 Flagellar L-ring protein signature 176 191 1.8E-21 T 09-03-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BV404_RS03210 b94dbe11ee2ad7c3fb0d1a8a4380b60c 260 PRINTS PR01008 Flagellar L-ring protein signature 239 253 1.8E-21 T 09-03-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BV404_RS03210 b94dbe11ee2ad7c3fb0d1a8a4380b60c 260 PRINTS PR01008 Flagellar L-ring protein signature 223 237 1.8E-21 T 09-03-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BV404_RS03210 b94dbe11ee2ad7c3fb0d1a8a4380b60c 260 PRINTS PR01008 Flagellar L-ring protein signature 104 116 1.8E-21 T 09-03-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BV404_RS14010 a1b88445205367a1e1018ce383dcf4c7 263 Pfam PF07070 SpoOM protein 4 218 3.7E-78 T 09-03-2017 IPR009776 Sporulation stage 0, protein M BV404_RS12130 364ca0b0af531b7b21360cc4941a8224 190 SMART SM00867 24 189 7.7E-14 T 09-03-2017 IPR007372 Lipid/polyisoprenoid-binding, YceI-like BV404_RS12130 364ca0b0af531b7b21360cc4941a8224 190 Gene3D G3DSA:2.40.128.110 22 189 3.4E-15 T 09-03-2017 IPR007372 Lipid/polyisoprenoid-binding, YceI-like BV404_RS12130 364ca0b0af531b7b21360cc4941a8224 190 Pfam PF04264 YceI-like domain 25 186 1.0E-16 T 09-03-2017 IPR007372 Lipid/polyisoprenoid-binding, YceI-like BV404_RS12130 364ca0b0af531b7b21360cc4941a8224 190 PIRSF PIRSF029811 1 190 3.3E-49 T 09-03-2017 IPR027016 Uncharacterised protein with YceI domain BV404_RS12130 364ca0b0af531b7b21360cc4941a8224 190 SUPERFAMILY SSF101874 24 190 1.27E-23 T 09-03-2017 IPR007372 Lipid/polyisoprenoid-binding, YceI-like BV404_RS06230 a11e305949b9e5ecf788a09ede276c5b 92 SUPERFAMILY SSF50715 1 92 1.66E-27 T 09-03-2017 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BV404_RS06230 a11e305949b9e5ecf788a09ede276c5b 92 Pfam PF01386 Ribosomal L25p family 4 89 9.8E-23 T 09-03-2017 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 BV404_RS06230 a11e305949b9e5ecf788a09ede276c5b 92 Gene3D G3DSA:2.40.240.10 1 92 1.1E-30 T 09-03-2017 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BV404_RS06230 a11e305949b9e5ecf788a09ede276c5b 92 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 1 92 3.0E-45 T 09-03-2017 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 BV404_RS06230 a11e305949b9e5ecf788a09ede276c5b 92 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 1 92 26.103 T 09-03-2017 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 BV404_RS06610 0d087057507823833ca66632de2d4ef3 340 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 50 334 2.7E-77 T 09-03-2017 IPR006507 Uncharacterised protein family UPF0283 BV404_RS06610 0d087057507823833ca66632de2d4ef3 340 Pfam PF05128 Domain of unknown function (DUF697) 176 334 1.6E-51 T 09-03-2017 IPR021147 Protein of unknown function DUF697 BV404_RS10395 664df386a50af63eac03aab9e39a6ed7 376 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 29 361 1.3E-88 T 09-03-2017 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BV404_RS10395 664df386a50af63eac03aab9e39a6ed7 376 SUPERFAMILY SSF53756 4 373 4.24E-111 T 09-03-2017 BV404_RS10395 664df386a50af63eac03aab9e39a6ed7 376 Gene3D G3DSA:3.40.50.2000 1 199 2.4E-63 T 09-03-2017 BV404_RS10395 664df386a50af63eac03aab9e39a6ed7 376 Gene3D G3DSA:3.40.50.2000 200 364 4.2E-50 T 09-03-2017 BV404_RS10395 664df386a50af63eac03aab9e39a6ed7 376 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 4 361 5.2E-73 T 09-03-2017 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 BV404_RS12155 c77b28b5dd537fd13f46c6ec0ec5efca 359 PIRSF PIRSF039026 1 358 6.4E-135 T 09-03-2017 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like BV404_RS12155 c77b28b5dd537fd13f46c6ec0ec5efca 359 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 38 324 3.7E-72 T 09-03-2017 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 BV404_RS09400 42e142575b25119ca979b9fa846668bd 270 SUPERFAMILY SSF52540 1 268 1.03E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09400 42e142575b25119ca979b9fa846668bd 270 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 217 3.6E-27 T 09-03-2017 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain BV404_RS09400 42e142575b25119ca979b9fa846668bd 270 PIRSF PIRSF003092 1 270 3.5E-95 T 09-03-2017 IPR025501 ATP binding protein MinD BV404_RS09400 42e142575b25119ca979b9fa846668bd 270 Gene3D G3DSA:3.40.50.300 1 248 6.4E-60 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS09400 42e142575b25119ca979b9fa846668bd 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 1.6E-110 T 09-03-2017 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 BV404_RS03865 4b7d6af13cb3cc81933fe1b717551a50 142 SUPERFAMILY SSF54197 3 133 3.19E-33 T 09-03-2017 IPR011146 HIT-like domain GO:0003824 BV404_RS03865 4b7d6af13cb3cc81933fe1b717551a50 142 PIRSF PIRSF000714 2 138 2.8E-52 T 09-03-2017 IPR026026 Histidine triad hydrolase, Hint-type BV404_RS03865 4b7d6af13cb3cc81933fe1b717551a50 142 Pfam PF01230 HIT domain 11 99 1.3E-18 T 09-03-2017 IPR001310 Histidine triad (HIT) protein BV404_RS03865 4b7d6af13cb3cc81933fe1b717551a50 142 Gene3D G3DSA:3.30.428.10 2 134 3.1E-36 T 09-03-2017 IPR011146 HIT-like domain GO:0003824 BV404_RS06415 27f24c6c3dc7d1e3158ac2c902cf7217 215 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 17 215 37.657 T 09-03-2017 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 BV404_RS06415 27f24c6c3dc7d1e3158ac2c902cf7217 215 SUPERFAMILY SSF142695 36 189 1.31E-53 T 09-03-2017 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 BV404_RS06415 27f24c6c3dc7d1e3158ac2c902cf7217 215 Pfam PF00925 GTP cyclohydrolase II 36 188 5.1E-58 T 09-03-2017 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 BV404_RS03410 ca77feefbe76cbde62fcd7c860222383 143 Pfam PF09842 Predicted membrane protein (DUF2069) 15 117 9.7E-34 T 09-03-2017 IPR018643 Protein of unknown function DUF2069, membrane BV404_RS00820 96bae20bda3af07c56b64cfee55bc0a9 423 Gene3D G3DSA:3.50.50.60 264 341 1.0E-31 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS00820 96bae20bda3af07c56b64cfee55bc0a9 423 Gene3D G3DSA:3.50.50.60 2 103 1.0E-31 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS00820 96bae20bda3af07c56b64cfee55bc0a9 423 SUPERFAMILY SSF51905 123 262 2.91E-6 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS00820 96bae20bda3af07c56b64cfee55bc0a9 423 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 306 3.5E-18 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS00820 96bae20bda3af07c56b64cfee55bc0a9 423 SUPERFAMILY SSF51905 257 313 3.89E-26 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS00820 96bae20bda3af07c56b64cfee55bc0a9 423 SUPERFAMILY SSF51905 3 109 3.89E-26 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS00820 96bae20bda3af07c56b64cfee55bc0a9 423 Gene3D G3DSA:3.50.50.60 104 237 4.9E-4 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS03910 fa6a0e0dd8606e82efa99662013686d3 122 Gene3D G3DSA:3.40.50.2300 1 121 1.0E-39 T 09-03-2017 BV404_RS03910 fa6a0e0dd8606e82efa99662013686d3 122 SUPERFAMILY SSF52172 1 121 1.71E-37 T 09-03-2017 IPR011006 CheY-like superfamily BV404_RS03910 fa6a0e0dd8606e82efa99662013686d3 122 SMART SM00448 1 115 4.0E-35 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS03910 fa6a0e0dd8606e82efa99662013686d3 122 Pfam PF00072 Response regulator receiver domain 3 115 1.5E-32 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS05340 63dbfca2d0db5fcc3ecc54451c05b87d 576 Gene3D G3DSA:3.90.550.10 15 132 9.4E-14 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases BV404_RS05340 63dbfca2d0db5fcc3ecc54451c05b87d 576 SUPERFAMILY SSF53448 14 242 1.13E-36 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases BV404_RS05340 63dbfca2d0db5fcc3ecc54451c05b87d 576 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 351 561 5.7E-11 T 09-03-2017 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 BV404_RS05340 63dbfca2d0db5fcc3ecc54451c05b87d 576 Pfam PF00535 Glycosyl transferase family 2 14 130 1.1E-21 T 09-03-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BV404_RS06885 4b6d135dc5d7f301896bfb00cc4d782d 181 Pfam PF01618 MotA/TolQ/ExbB proton channel family 70 174 4.0E-21 T 09-03-2017 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 BV404_RS13715 44c2f39149bc2b6b3cbf8e1fa6086fc9 222 PIRSF PIRSF006324 1 213 1.8E-49 T 09-03-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 BV404_RS13715 44c2f39149bc2b6b3cbf8e1fa6086fc9 222 Pfam PF01810 LysE type translocator 16 210 3.2E-37 T 09-03-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 BV404_RS05610 c6ad835140aca0ae4ea23652849f4dab 186 Pfam PF16036 Chalcone isomerase-like 43 183 2.4E-8 T 09-03-2017 IPR016087 Chalcone isomerase GO:0016872 BV404_RS22245 dfe5d3023ca03bbc04db7e50bc33b6eb 96 SUPERFAMILY SSF63737 4 96 4.05E-11 T 09-03-2017 BV404_RS13395 1aac7ca2bed66dbc72b3f9badba9972b 249 Gene3D G3DSA:3.90.550.10 51 243 7.6E-18 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases BV404_RS13395 1aac7ca2bed66dbc72b3f9badba9972b 249 SUPERFAMILY SSF53448 42 238 1.06E-27 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases BV404_RS01675 3665c2ac3b8dd49f85a4376509724d8c 191 SUPERFAMILY SSF101327 7 178 2.75E-43 T 09-03-2017 IPR011978 Uncharacterised protein family UPF0149 BV404_RS01675 3665c2ac3b8dd49f85a4376509724d8c 191 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 5 189 33.33 T 09-03-2017 IPR011978 Uncharacterised protein family UPF0149 BV404_RS01675 3665c2ac3b8dd49f85a4376509724d8c 191 Pfam PF03695 Uncharacterised protein family (UPF0149) 12 179 2.2E-38 T 09-03-2017 IPR011978 Uncharacterised protein family UPF0149 BV404_RS01675 3665c2ac3b8dd49f85a4376509724d8c 191 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 25 176 8.3E-13 T 09-03-2017 IPR011978 Uncharacterised protein family UPF0149 BV404_RS08340 da7c6a1d7cf3f6198497321094625f9c 100 SUPERFAMILY SSF54909 1 98 1.32E-24 T 09-03-2017 IPR011008 Dimeric alpha-beta barrel BV404_RS08340 da7c6a1d7cf3f6198497321094625f9c 100 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 75 2.7E-14 T 09-03-2017 IPR007138 Antibiotic biosynthesis monooxygenase domain BV404_RS08340 da7c6a1d7cf3f6198497321094625f9c 100 Gene3D G3DSA:3.30.70.900 1 97 2.3E-17 T 09-03-2017 BV404_RS00610 4de29c5bc646efecb7affa11c43513a2 205 Gene3D G3DSA:1.10.10.10 6 99 7.2E-12 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS00610 4de29c5bc646efecb7affa11c43513a2 205 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 46 2.0E-6 T 09-03-2017 BV404_RS00610 4de29c5bc646efecb7affa11c43513a2 205 SUPERFAMILY SSF46785 6 183 6.26E-37 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS01780 3721f3acb0248bf4af0c8d447b8c6190 440 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 99 436 1.0E-32 T 09-03-2017 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 BV404_RS01780 3721f3acb0248bf4af0c8d447b8c6190 440 SUPERFAMILY SSF50249 18 74 4.85E-15 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS01780 3721f3acb0248bf4af0c8d447b8c6190 440 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 25 431 2.8E-130 T 09-03-2017 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 BV404_RS01780 3721f3acb0248bf4af0c8d447b8c6190 440 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 421 431 - T 09-03-2017 IPR030391 RNA methyltransferase TrmA, conserved site BV404_RS01780 3721f3acb0248bf4af0c8d447b8c6190 440 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 370 400 - T 09-03-2017 IPR030390 RNA methyltransferase TrmA, active site BV404_RS01780 3721f3acb0248bf4af0c8d447b8c6190 440 Gene3D G3DSA:2.40.50.140 4 88 2.9E-30 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS01780 3721f3acb0248bf4af0c8d447b8c6190 440 Gene3D G3DSA:3.40.50.150 260 437 2.7E-58 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS01780 3721f3acb0248bf4af0c8d447b8c6190 440 SUPERFAMILY SSF53335 77 438 5.19E-85 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS01780 3721f3acb0248bf4af0c8d447b8c6190 440 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 19 439 66.763 T 09-03-2017 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 BV404_RS01780 3721f3acb0248bf4af0c8d447b8c6190 440 Pfam PF01938 TRAM domain 17 68 9.2E-11 T 09-03-2017 IPR002792 TRAM domain BV404_RS11650 12a560712d09bdf90c391499f275b067 260 Pfam PF03799 Cell division protein FtsQ 126 238 3.2E-24 T 09-03-2017 IPR005548 Cell division protein FtsQ/DivIB BV404_RS11650 12a560712d09bdf90c391499f275b067 260 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 22 246 22.714 T 09-03-2017 IPR026579 Cell division protein FtsQ GO:0090529 BV404_RS11650 12a560712d09bdf90c391499f275b067 260 Pfam PF08478 POTRA domain, FtsQ-type 53 122 2.0E-16 T 09-03-2017 IPR013685 Polypeptide-transport-associated, FtsQ-type BV404_RS11940 ff5c04c5b6febc098ab8c363c7564ac1 162 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 11 157 2.3E-49 T 09-03-2017 IPR008136 CinA, C-terminal BV404_RS11940 ff5c04c5b6febc098ab8c363c7564ac1 162 Gene3D G3DSA:3.90.950.20 4 160 1.0E-56 T 09-03-2017 IPR008136 CinA, C-terminal BV404_RS11940 ff5c04c5b6febc098ab8c363c7564ac1 162 Pfam PF02464 Competence-damaged protein 5 158 6.6E-57 T 09-03-2017 IPR008136 CinA, C-terminal BV404_RS11940 ff5c04c5b6febc098ab8c363c7564ac1 162 SUPERFAMILY SSF142433 5 159 1.02E-55 T 09-03-2017 IPR008136 CinA, C-terminal BV404_RS10565 16df855b8044a7236376dae959b0d52e 482 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 382 482 9.1E-43 T 09-03-2017 IPR026340 Thiazole biosynthesis domain GO:0052837 BV404_RS10565 16df855b8044a7236376dae959b0d52e 482 Gene3D G3DSA:3.40.250.10 399 480 2.5E-10 T 09-03-2017 IPR001763 Rhodanese-like domain BV404_RS10565 16df855b8044a7236376dae959b0d52e 482 SMART SM00981 75 165 3.2E-23 T 09-03-2017 IPR004114 THUMP domain GO:0003723 BV404_RS10565 16df855b8044a7236376dae959b0d52e 482 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 482 222.144 T 09-03-2017 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 BV404_RS10565 16df855b8044a7236376dae959b0d52e 482 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 376 1.6E-110 T 09-03-2017 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 BV404_RS10565 16df855b8044a7236376dae959b0d52e 482 SUPERFAMILY SSF143437 1 173 9.07E-47 T 09-03-2017 BV404_RS10565 16df855b8044a7236376dae959b0d52e 482 Pfam PF02926 THUMP domain 43 156 3.4E-22 T 09-03-2017 IPR004114 THUMP domain GO:0003723 BV404_RS10565 16df855b8044a7236376dae959b0d52e 482 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 1.9E-71 T 09-03-2017 IPR020536 Thil, AANH domain GO:0004810 BV404_RS10565 16df855b8044a7236376dae959b0d52e 482 Gene3D G3DSA:3.40.50.620 173 333 1.1E-34 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS10565 16df855b8044a7236376dae959b0d52e 482 SUPERFAMILY SSF52821 402 480 1.65E-11 T 09-03-2017 IPR001763 Rhodanese-like domain BV404_RS10565 16df855b8044a7236376dae959b0d52e 482 SUPERFAMILY SSF52402 174 372 3.31E-43 T 09-03-2017 BV404_RS04315 b68c3e7296022da5f711bdbee8c37c32 486 Pfam PF00209 Sodium:neurotransmitter symporter family 123 469 2.3E-77 T 09-03-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BV404_RS04315 b68c3e7296022da5f711bdbee8c37c32 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 84 110 9.5E-36 T 09-03-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BV404_RS04315 b68c3e7296022da5f711bdbee8c37c32 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 40 59 9.5E-36 T 09-03-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BV404_RS04315 b68c3e7296022da5f711bdbee8c37c32 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 257 277 9.5E-36 T 09-03-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BV404_RS04315 b68c3e7296022da5f711bdbee8c37c32 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 388 408 9.5E-36 T 09-03-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BV404_RS04315 b68c3e7296022da5f711bdbee8c37c32 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 428 448 9.5E-36 T 09-03-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BV404_RS04315 b68c3e7296022da5f711bdbee8c37c32 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 11 32 9.5E-36 T 09-03-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BV404_RS04315 b68c3e7296022da5f711bdbee8c37c32 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 311 330 9.5E-36 T 09-03-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BV404_RS04315 b68c3e7296022da5f711bdbee8c37c32 486 SUPERFAMILY SSF161070 3 472 1.23E-147 T 09-03-2017 BV404_RS04315 b68c3e7296022da5f711bdbee8c37c32 486 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 27 41 - T 09-03-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BV404_RS04970 c9e033a9db5e092f1b404f516ca44fe3 82 Pfam PF13192 Thioredoxin domain 3 76 3.7E-22 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS04970 c9e033a9db5e092f1b404f516ca44fe3 82 PIRSF PIRSF037031 1 78 2.2E-26 T 09-03-2017 IPR005243 Redox-active disulphide protein 2 BV404_RS04970 c9e033a9db5e092f1b404f516ca44fe3 82 SUPERFAMILY SSF52833 5 77 3.09E-16 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS04970 c9e033a9db5e092f1b404f516ca44fe3 82 Gene3D G3DSA:3.40.30.10 3 77 7.5E-25 T 09-03-2017 IPR012336 Thioredoxin-like fold BV404_RS04875 1b6ba641247e93f3fc94b3b053313c2d 332 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 52 199 9.2E-33 T 09-03-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 BV404_RS04875 1b6ba641247e93f3fc94b3b053313c2d 332 Gene3D G3DSA:3.40.50.970 18 246 8.1E-82 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold BV404_RS04875 1b6ba641247e93f3fc94b3b053313c2d 332 SUPERFAMILY SSF52518 15 330 6.11E-79 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold BV404_RS12790 e7c2b2f44c75b643f99e1945bae7445b 327 Pfam PF01207 Dihydrouridine synthase (Dus) 9 317 9.7E-97 T 09-03-2017 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 BV404_RS12790 e7c2b2f44c75b643f99e1945bae7445b 327 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 6 319 8.8E-162 T 09-03-2017 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 BV404_RS12790 e7c2b2f44c75b643f99e1945bae7445b 327 SUPERFAMILY SSF51395 6 319 1.34E-76 T 09-03-2017 BV404_RS12790 e7c2b2f44c75b643f99e1945bae7445b 327 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 87 105 - T 09-03-2017 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 BV404_RS12790 e7c2b2f44c75b643f99e1945bae7445b 327 PIRSF PIRSF006621 1 325 2.0E-75 T 09-03-2017 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 BV404_RS12790 e7c2b2f44c75b643f99e1945bae7445b 327 Gene3D G3DSA:3.20.20.70 5 246 6.7E-77 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS12790 e7c2b2f44c75b643f99e1945bae7445b 327 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 1 322 53.635 T 09-03-2017 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 BV404_RS02670 0bd5783205932441eb06239ad6f47e57 181 Gene3D G3DSA:2.40.100.10 20 180 1.3E-47 T 09-03-2017 IPR029000 Cyclophilin-like domain BV404_RS02670 0bd5783205932441eb06239ad6f47e57 181 SUPERFAMILY SSF50891 18 180 5.41E-51 T 09-03-2017 IPR029000 Cyclophilin-like domain BV404_RS02670 0bd5783205932441eb06239ad6f47e57 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 35 50 2.2E-9 T 09-03-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 BV404_RS02670 0bd5783205932441eb06239ad6f47e57 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 61 73 2.2E-9 T 09-03-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 BV404_RS02670 0bd5783205932441eb06239ad6f47e57 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 2.2E-9 T 09-03-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 BV404_RS02670 0bd5783205932441eb06239ad6f47e57 181 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 56 73 - T 09-03-2017 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 BV404_RS02670 0bd5783205932441eb06239ad6f47e57 181 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 22 178 2.0E-42 T 09-03-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 BV404_RS10220 a31915fdfcdba852f3352d11c10427fe 182 PIRSF PIRSF038321 1 181 3.5E-86 T 09-03-2017 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 BV404_RS10220 a31915fdfcdba852f3352d11c10427fe 182 TIGRFAM TIGR00821 EII-GUT: PTS system, glucitol/sorbitol-specific, IIC component 1 180 4.2E-99 T 09-03-2017 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 BV404_RS10220 a31915fdfcdba852f3352d11c10427fe 182 Pfam PF03608 PTS system enzyme II sorbitol-specific factor 7 170 7.5E-74 T 09-03-2017 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 BV404_RS12650 d615ea2939381a4ad270bf94e67b9867 176 SUPERFAMILY SSF50249 4 176 4.11E-61 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS12650 d615ea2939381a4ad270bf94e67b9867 176 Pfam PF00436 Single-strand binding protein family 6 113 6.3E-43 T 09-03-2017 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 BV404_RS12650 d615ea2939381a4ad270bf94e67b9867 176 Hamap MF_00984 Single-stranded DNA-binding protein. 6 118 39.145 T 09-03-2017 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 BV404_RS12650 d615ea2939381a4ad270bf94e67b9867 176 Gene3D G3DSA:2.40.50.140 4 176 1.6E-56 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS12650 d615ea2939381a4ad270bf94e67b9867 176 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 176 3.0E-62 T 09-03-2017 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 BV404_RS07940 9fd78a9d3b77d99e4085b23a543d2560 160 SUPERFAMILY SSF55729 2 159 2.34E-25 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS07940 9fd78a9d3b77d99e4085b23a543d2560 160 Gene3D G3DSA:3.40.630.30 2 159 5.6E-27 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS07940 9fd78a9d3b77d99e4085b23a543d2560 160 Pfam PF13673 Acetyltransferase (GNAT) domain 32 137 6.1E-8 T 09-03-2017 IPR000182 GNAT domain GO:0008080 BV404_RS08220 49f62d3c2d2df4da29136bc6ef7479a3 227 Pfam PF10979 Protein of unknown function (DUF2786) 5 42 2.7E-12 T 09-03-2017 IPR024498 Domain of unknown function DUF2786 BV404_RS08220 49f62d3c2d2df4da29136bc6ef7479a3 227 PIRSF PIRSF028111 1 227 5.1E-83 T 09-03-2017 IPR016868 Bacteriophage B3, Orf5 BV404_RS00890 8a14210c28bbcbccdac1190b1c4c5272 71 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 7 65 4.9E-32 T 09-03-2017 IPR012658 Conserved hypothetical protein CHP02443 BV404_RS00890 8a14210c28bbcbccdac1190b1c4c5272 71 Pfam PF09526 Probable metal-binding protein (DUF2387) 9 55 8.4E-20 T 09-03-2017 IPR012658 Conserved hypothetical protein CHP02443 BV404_RS08375 31116541580f07b7c7c808dd312d7fcf 268 Pfam PF02698 DUF218 domain 72 208 1.1E-19 T 09-03-2017 IPR003848 Domain of unknown function DUF218 BV404_RS08375 31116541580f07b7c7c808dd312d7fcf 268 Gene3D G3DSA:3.40.50.620 68 191 1.1E-7 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS11250 afeb19b599fadb00dd48eb26989daf6a 356 Pfam PF01263 Aldose 1-epimerase 22 348 2.2E-84 T 09-03-2017 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 BV404_RS11250 afeb19b599fadb00dd48eb26989daf6a 356 Gene3D G3DSA:2.70.98.10 15 353 3.0E-115 T 09-03-2017 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 BV404_RS11250 afeb19b599fadb00dd48eb26989daf6a 356 SUPERFAMILY SSF74650 9 349 4.08E-105 T 09-03-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 BV404_RS11250 afeb19b599fadb00dd48eb26989daf6a 356 PIRSF PIRSF005096 6 352 5.5E-116 T 09-03-2017 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 BV404_RS11250 afeb19b599fadb00dd48eb26989daf6a 356 TIGRFAM TIGR02636 galM_Leloir: galactose mutarotase 18 349 2.0E-140 T 09-03-2017 IPR013458 Aldose 1-epimerase, bacterial GO:0004034|GO:0006012 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 BV404_RS11250 afeb19b599fadb00dd48eb26989daf6a 356 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 175 184 - T 09-03-2017 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 BV404_RS02465 c84c052fdbbca60b00830b8b99ab17e1 320 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 6 290 6.4E-97 T 09-03-2017 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 BV404_RS02465 c84c052fdbbca60b00830b8b99ab17e1 320 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 5 292 37.921 T 09-03-2017 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 BV404_RS02465 c84c052fdbbca60b00830b8b99ab17e1 320 Pfam PF02401 LytB protein 7 288 2.5E-92 T 09-03-2017 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 BV404_RS10840 569c5736245f0c40396abda48c86774a 438 Gene3D G3DSA:1.20.1250.20 27 233 4.5E-21 T 09-03-2017 BV404_RS10840 569c5736245f0c40396abda48c86774a 438 Gene3D G3DSA:1.20.1250.20 248 435 3.6E-12 T 09-03-2017 BV404_RS10840 569c5736245f0c40396abda48c86774a 438 Pfam PF07690 Major Facilitator Superfamily 35 298 1.1E-16 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BV404_RS10840 569c5736245f0c40396abda48c86774a 438 SUPERFAMILY SSF103473 27 433 1.44E-56 T 09-03-2017 IPR020846 Major facilitator superfamily domain BV404_RS13810 76d88b377028b638d05bcff930877ed1 571 SUPERFAMILY SSF52540 3 253 1.97E-66 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS13810 76d88b377028b638d05bcff930877ed1 571 SUPERFAMILY SSF52540 303 553 2.0E-72 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS13810 76d88b377028b638d05bcff930877ed1 571 Pfam PF00005 ABC transporter 330 483 3.0E-34 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS13810 76d88b377028b638d05bcff930877ed1 571 Pfam PF00005 ABC transporter 24 181 1.3E-29 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS13810 76d88b377028b638d05bcff930877ed1 571 Gene3D G3DSA:3.40.50.300 301 555 6.5E-80 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS13810 76d88b377028b638d05bcff930877ed1 571 Gene3D G3DSA:3.40.50.300 2 255 1.0E-74 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS13810 76d88b377028b638d05bcff930877ed1 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 534 563 0.0014 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BV404_RS13810 76d88b377028b638d05bcff930877ed1 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 268 6.7E-7 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BV404_RS13810 76d88b377028b638d05bcff930877ed1 571 SMART SM00382 32 231 8.0E-17 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS13810 76d88b377028b638d05bcff930877ed1 571 SMART SM00382 338 534 1.5E-16 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS13810 76d88b377028b638d05bcff930877ed1 571 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS13810 76d88b377028b638d05bcff930877ed1 571 ProSitePatterns PS00211 ABC transporters family signature. 455 469 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BV404_RS06265 f7a65221c95370113ca5bf1be19fe9d9 219 Pfam PF11140 Protein of unknown function (DUF2913) 3 213 2.4E-83 T 09-03-2017 IPR021316 Protein of unknown function DUF2913 BV404_RS00445 4fdafa3dc0beb9d09738cc5074ffb422 435 PIRSF PIRSF004539 1 435 6.7E-179 T 09-03-2017 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 BV404_RS00445 4fdafa3dc0beb9d09738cc5074ffb422 435 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 433 2.6E-179 T 09-03-2017 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 BV404_RS00445 4fdafa3dc0beb9d09738cc5074ffb422 435 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 367 7.0E-145 T 09-03-2017 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 BV404_RS01545 bbabf2298ae142da80c8f8efa6689074 134 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 4 129 3.8E-7 T 09-03-2017 IPR028973 PhnB-like BV404_RS01545 bbabf2298ae142da80c8f8efa6689074 134 SUPERFAMILY SSF54593 1 132 5.14E-29 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BV404_RS01545 bbabf2298ae142da80c8f8efa6689074 134 Gene3D G3DSA:3.10.180.10 8 132 2.6E-33 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BV404_RS07170 49950df2e0f4733c8e25b9054bbab77e 206 SUPERFAMILY SSF46626 21 201 1.28E-27 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 BV404_RS07170 49950df2e0f4733c8e25b9054bbab77e 206 Gene3D G3DSA:1.10.760.10 21 202 8.2E-34 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 BV404_RS07170 49950df2e0f4733c8e25b9054bbab77e 206 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 9 187 1.2E-81 T 09-03-2017 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO BV404_RS07170 49950df2e0f4733c8e25b9054bbab77e 206 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 9 186 7.5E-82 T 09-03-2017 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO BV404_RS14630 0525e30f3c191633c924309a5e3376a3 393 Gene3D G3DSA:1.25.40.10 85 204 6.4E-5 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BV404_RS14630 0525e30f3c191633c924309a5e3376a3 393 Gene3D G3DSA:1.25.40.10 312 389 3.8E-11 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BV404_RS14630 0525e30f3c191633c924309a5e3376a3 393 SUPERFAMILY SSF48452 306 389 1.04E-10 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BV404_RS14630 0525e30f3c191633c924309a5e3376a3 393 SUPERFAMILY SSF48452 82 207 8.06E-6 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BV404_RS14630 0525e30f3c191633c924309a5e3376a3 393 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 3 386 1.4E-116 T 09-03-2017 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 BV404_RS14630 0525e30f3c191633c924309a5e3376a3 393 Pfam PF07219 HemY protein N-terminus 26 132 6.4E-27 T 09-03-2017 IPR010817 HemY, N-terminal BV404_RS06815 55e28522361d9a96c4064dc85ca06a49 304 SUPERFAMILY SSF75005 38 226 5.06E-8 T 09-03-2017 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain BV404_RS03160 58e67f7dce244e23f165e0a518ab5f44 106 SUPERFAMILY SSF101498 2 100 2.88E-20 T 09-03-2017 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 BV404_RS03160 58e67f7dce244e23f165e0a518ab5f44 106 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 4 101 6.2E-24 T 09-03-2017 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 BV404_RS03160 58e67f7dce244e23f165e0a518ab5f44 106 Pfam PF04316 Anti-sigma-28 factor, FlgM 44 97 1.5E-17 T 09-03-2017 IPR031316 Anti-sigma-28 factor FlgM, C-terminal BV404_RS14620 cfe6fe138b368260b6ce1b01507c1aab 162 Pfam PF10675 Protein of unknown function (DUF2489) 14 146 6.3E-45 T 09-03-2017 IPR019617 Domain of unknown function DUF2489 BV404_RS12285 9f4582143adaa85990386c0cd5347e6d 345 Gene3D G3DSA:3.40.50.300 100 338 3.8E-73 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS12285 9f4582143adaa85990386c0cd5347e6d 345 SUPERFAMILY SSF52540 5 336 8.47E-78 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS12285 9f4582143adaa85990386c0cd5347e6d 345 Pfam PF00437 Type II/IV secretion system protein 12 270 1.5E-45 T 09-03-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 BV404_RS12285 9f4582143adaa85990386c0cd5347e6d 345 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 331 1.2E-150 T 09-03-2017 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 BV404_RS12285 9f4582143adaa85990386c0cd5347e6d 345 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 09-03-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 BV404_RS06325 0087fe3874c308e230a6775830619428 414 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 3 144 2.5E-30 T 09-03-2017 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 BV404_RS06325 0087fe3874c308e230a6775830619428 414 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 149 394 5.6E-29 T 09-03-2017 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 BV404_RS06325 0087fe3874c308e230a6775830619428 414 Gene3D G3DSA:3.40.50.720 2 196 3.3E-31 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS06325 0087fe3874c308e230a6775830619428 414 SUPERFAMILY SSF51735 1 184 3.86E-17 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS15515 e1acecc0959f038309cfd88d68118aa1 230 Pfam PF07724 AAA domain (Cdc48 subfamily) 125 230 3.3E-27 T 09-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 BV404_RS15515 e1acecc0959f038309cfd88d68118aa1 230 Gene3D G3DSA:3.40.50.300 183 229 4.4E-23 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS15515 e1acecc0959f038309cfd88d68118aa1 230 Gene3D G3DSA:3.40.50.300 1 47 4.4E-23 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS15515 e1acecc0959f038309cfd88d68118aa1 230 SUPERFAMILY SSF52540 1 228 5.34E-42 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS15515 e1acecc0959f038309cfd88d68118aa1 230 Gene3D G3DSA:1.10.8.10 153 182 3.6E-36 T 09-03-2017 BV404_RS15515 e1acecc0959f038309cfd88d68118aa1 230 Gene3D G3DSA:1.10.8.10 50 117 3.6E-36 T 09-03-2017 BV404_RS07240 606a78b331599643aafca24d225e83ce 405 Pfam PF03958 Bacterial type II/III secretion system short domain 115 187 2.4E-11 T 09-03-2017 IPR005644 NolW-like BV404_RS07240 606a78b331599643aafca24d225e83ce 405 PRINTS PR01032 Gene IV protein signature 267 290 6.2E-28 T 09-03-2017 BV404_RS07240 606a78b331599643aafca24d225e83ce 405 PRINTS PR01032 Gene IV protein signature 333 361 6.2E-28 T 09-03-2017 BV404_RS07240 606a78b331599643aafca24d225e83ce 405 PRINTS PR01032 Gene IV protein signature 386 405 6.2E-28 T 09-03-2017 BV404_RS07240 606a78b331599643aafca24d225e83ce 405 PRINTS PR01032 Gene IV protein signature 31 52 6.2E-28 T 09-03-2017 BV404_RS07240 606a78b331599643aafca24d225e83ce 405 Pfam PF00263 Bacterial type II and III secretion system protein 247 405 2.4E-41 T 09-03-2017 IPR004846 Type II/III secretion system GO:0009306 BV404_RS07240 606a78b331599643aafca24d225e83ce 405 PRINTS PR00811 Bacterial general secretion pathway protein D signature 277 287 2.1E-22 T 09-03-2017 IPR001775 GspD/PilQ family BV404_RS07240 606a78b331599643aafca24d225e83ce 405 PRINTS PR00811 Bacterial general secretion pathway protein D signature 370 388 2.1E-22 T 09-03-2017 IPR001775 GspD/PilQ family BV404_RS07240 606a78b331599643aafca24d225e83ce 405 PRINTS PR00811 Bacterial general secretion pathway protein D signature 393 405 2.1E-22 T 09-03-2017 IPR001775 GspD/PilQ family BV404_RS07240 606a78b331599643aafca24d225e83ce 405 PRINTS PR00811 Bacterial general secretion pathway protein D signature 187 197 2.1E-22 T 09-03-2017 IPR001775 GspD/PilQ family BV404_RS07240 606a78b331599643aafca24d225e83ce 405 PRINTS PR00811 Bacterial general secretion pathway protein D signature 242 266 2.1E-22 T 09-03-2017 IPR001775 GspD/PilQ family BV404_RS04795 1229f4c470940c14b31f9dd547e05f32 361 Pfam PF05114 Protein of unknown function (DUF692) 121 233 5.1E-19 T 09-03-2017 IPR007801 Uncharacterised protein family UPF0276 BV404_RS04795 1229f4c470940c14b31f9dd547e05f32 361 Gene3D G3DSA:3.20.20.150 46 269 1.0E-24 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain BV404_RS09590 cfc16683f919b2f84d14269005bc151a 241 Pfam PF11859 Protein of unknown function (DUF3379) 1 237 1.1E-82 T 09-03-2017 IPR021806 Protein of unknown function DUF3379 BV404_RS04840 5037ab78f0e7dff830d0a65d9d2d27c7 145 Pfam PF07681 DoxX 15 96 1.8E-11 T 09-03-2017 IPR032808 DoxX family BV404_RS00040 80c44a600997fed92f6bb41612755645 123 Pfam PF07226 Protein of unknown function (DUF1422) 10 118 4.0E-48 T 09-03-2017 IPR009867 Protein of unknown function DUF1422 BV404_RS00040 80c44a600997fed92f6bb41612755645 123 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 10 116 8.0E-47 T 09-03-2017 IPR009867 Protein of unknown function DUF1422 BV404_RS14875 80c44a600997fed92f6bb41612755645 123 Pfam PF07226 Protein of unknown function (DUF1422) 10 118 4.0E-48 T 09-03-2017 IPR009867 Protein of unknown function DUF1422 BV404_RS14875 80c44a600997fed92f6bb41612755645 123 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 10 116 8.0E-47 T 09-03-2017 IPR009867 Protein of unknown function DUF1422 BV404_RS08420 cc2d7b16162c0930844dc444dd6134ca 104 Pfam PF13642 protein structure with unknown function 4 101 2.4E-33 T 09-03-2017 IPR025284 Protein of unknown function DUF4144 BV404_RS17420 ef1abb58db98a8772e5ecc8e9785a1b4 65 Pfam PF06580 Histidine kinase 20 64 4.7E-17 T 09-03-2017 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 BV404_RS13695 327159036ddbc486a2526e2d1e432602 100 Pfam PF12305 Protein of unknown function (DUF3630) 5 96 1.3E-36 T 09-03-2017 IPR022080 Protein of unknown function DUF3630 BV404_RS01895 9b00f44f05725d08ea484a7bd1135a13 65 SUPERFAMILY SSF57716 5 63 2.0E-21 T 09-03-2017 BV404_RS01895 9b00f44f05725d08ea484a7bd1135a13 65 Gene3D G3DSA:3.30.50.10 2 63 3.0E-26 T 09-03-2017 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 BV404_RS01895 9b00f44f05725d08ea484a7bd1135a13 65 Pfam PF03884 Domain of unknown function (DUF329) 8 58 7.9E-25 T 09-03-2017 IPR005584 DNA gyrase inhibitor YacG GO:0008270 BV404_RS01895 9b00f44f05725d08ea484a7bd1135a13 65 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 4 60 18.799 T 09-03-2017 IPR005584 DNA gyrase inhibitor YacG GO:0008270 BV404_RS05230 32077fbcf293ea73bb5945b7016d3d79 399 SUPERFAMILY SSF111369 199 298 3.27E-11 T 09-03-2017 BV404_RS05230 32077fbcf293ea73bb5945b7016d3d79 399 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 182 319 6.1E-11 T 09-03-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BV404_RS05230 32077fbcf293ea73bb5945b7016d3d79 399 Pfam PF00529 HlyD membrane-fusion protein of T1SS 41 377 6.0E-15 T 09-03-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 BV404_RS05230 32077fbcf293ea73bb5945b7016d3d79 399 SUPERFAMILY SSF111369 59 150 1.57E-11 T 09-03-2017 BV404_RS05230 32077fbcf293ea73bb5945b7016d3d79 399 SUPERFAMILY SSF111369 141 201 3.79E-6 T 09-03-2017 BV404_RS05230 32077fbcf293ea73bb5945b7016d3d79 399 Gene3D G3DSA:2.40.50.100 64 97 5.0E-20 T 09-03-2017 BV404_RS05230 32077fbcf293ea73bb5945b7016d3d79 399 Gene3D G3DSA:2.40.50.100 246 279 5.0E-20 T 09-03-2017 BV404_RS09700 5c1c74f33f6a3a861a7b7d3dd32b0cff 112 Pfam PF01627 Hpt domain 24 92 8.6E-9 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 BV404_RS09700 5c1c74f33f6a3a861a7b7d3dd32b0cff 112 SUPERFAMILY SSF47226 2 110 1.31E-19 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 BV404_RS09700 5c1c74f33f6a3a861a7b7d3dd32b0cff 112 Gene3D G3DSA:1.20.120.160 2 111 1.5E-23 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 BV404_RS06430 b83ea4ee81b6c08f6c2225052628aee2 341 Pfam PF09375 Imelysin 44 320 4.1E-37 T 09-03-2017 BV404_RS10350 85a7bc9e0c0e0747b5e02f48ef13aa9f 928 SUPERFAMILY SSF56349 367 591 4.12E-10 T 09-03-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BV404_RS10350 85a7bc9e0c0e0747b5e02f48ef13aa9f 928 Gene3D G3DSA:1.10.443.10 438 588 7.3E-10 T 09-03-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 BV404_RS08585 7f69a0f94ff1996d50a8b4732a4a8ee2 135 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 27 114 1.2E-17 T 09-03-2017 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 BV404_RS08585 7f69a0f94ff1996d50a8b4732a4a8ee2 135 SUPERFAMILY SSF51316 1 132 1.26E-39 T 09-03-2017 IPR011057 Mss4-like BV404_RS08585 7f69a0f94ff1996d50a8b4732a4a8ee2 135 Gene3D G3DSA:3.90.1590.10 2 129 9.3E-35 T 09-03-2017 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 BV404_RS11230 3a6a34004308b485d1290d9801fa72c6 483 Gene3D G3DSA:3.30.470.20 276 282 2.0E-5 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 BV404_RS11230 3a6a34004308b485d1290d9801fa72c6 483 Gene3D G3DSA:3.30.470.20 357 454 2.0E-5 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 BV404_RS11230 3a6a34004308b485d1290d9801fa72c6 483 SUPERFAMILY SSF56059 268 476 4.95E-41 T 09-03-2017 BV404_RS11230 3a6a34004308b485d1290d9801fa72c6 483 Pfam PF08443 RimK-like ATP-grasp domain 277 455 8.3E-13 T 09-03-2017 IPR013651 ATP-grasp fold, RimK-type BV404_RS11230 3a6a34004308b485d1290d9801fa72c6 483 Pfam PF14401 RimK-like ATPgrasp N-terminal domain 27 167 1.1E-44 T 09-03-2017 IPR025839 RimK-like ATPgrasp N-terminal domain BV404_RS11230 3a6a34004308b485d1290d9801fa72c6 483 Gene3D G3DSA:3.30.1490.20 283 356 1.1E-10 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 BV404_RS11230 3a6a34004308b485d1290d9801fa72c6 483 Gene3D G3DSA:3.40.50.20 208 275 4.9E-10 T 09-03-2017 IPR016185 Pre-ATP-grasp domain BV404_RS06795 feeb09ad3c4ce435e475cd57536b0ec0 357 Gene3D G3DSA:3.10.180.10 159 354 1.3E-72 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BV404_RS06795 feeb09ad3c4ce435e475cd57536b0ec0 357 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 12 354 5.4E-133 T 09-03-2017 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 BV404_RS06795 feeb09ad3c4ce435e475cd57536b0ec0 357 Gene3D G3DSA:3.10.180.10 5 146 1.1E-44 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BV404_RS06795 feeb09ad3c4ce435e475cd57536b0ec0 357 SUPERFAMILY SSF54593 9 341 1.39E-77 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BV404_RS06795 feeb09ad3c4ce435e475cd57536b0ec0 357 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 163 274 2.5E-14 T 09-03-2017 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BV404_RS06795 feeb09ad3c4ce435e475cd57536b0ec0 357 PIRSF PIRSF009283 1 355 1.6E-125 T 09-03-2017 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 BV404_RS06795 feeb09ad3c4ce435e475cd57536b0ec0 357 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 6 143 7.6E-58 T 09-03-2017 BV404_RS11315 4480b1db49ee5f45c8350b840c7f52ed 248 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 8 221 1.3E-69 T 09-03-2017 IPR017592 Pilus assembly, Flp-type CpaB BV404_RS11315 4480b1db49ee5f45c8350b840c7f52ed 248 Pfam PF08666 SAF domain 45 105 2.7E-6 T 09-03-2017 IPR013974 SAF domain Reactome: R-HSA-4085001 BV404_RS11315 4480b1db49ee5f45c8350b840c7f52ed 248 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 113 215 1.4E-28 T 09-03-2017 IPR031571 Flp pilus assembly protein RcpC/CpaB domain BV404_RS11315 4480b1db49ee5f45c8350b840c7f52ed 248 SMART SM00858 44 106 1.2E-5 T 09-03-2017 IPR013974 SAF domain Reactome: R-HSA-4085001 BV404_RS14445 fec724ca47bdaace6db85f0f57d766a6 262 Gene3D G3DSA:3.40.50.150 57 256 1.2E-77 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS14445 fec724ca47bdaace6db85f0f57d766a6 262 Pfam PF04445 Putative SAM-dependent methyltransferase 19 254 8.9E-107 T 09-03-2017 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 BV404_RS14445 fec724ca47bdaace6db85f0f57d766a6 262 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 3 256 38.437 T 09-03-2017 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 BV404_RS14445 fec724ca47bdaace6db85f0f57d766a6 262 SUPERFAMILY SSF53335 7 255 2.39E-75 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS14445 fec724ca47bdaace6db85f0f57d766a6 262 Gene3D G3DSA:3.40.1630.10 2 56 2.2E-27 T 09-03-2017 BV404_RS06910 67174031a18343b65b99794f77cd0bed 278 Pfam PF01734 Patatin-like phospholipase 7 171 4.0E-14 T 09-03-2017 IPR002641 Patatin/Phospholipase A2-related GO:0006629 BV404_RS06910 67174031a18343b65b99794f77cd0bed 278 SUPERFAMILY SSF52151 4 226 5.75E-35 T 09-03-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 BV404_RS04975 da719aace68deb193ae990aa64cb1598 329 Pfam PF03773 Predicted permease 25 324 6.6E-65 T 09-03-2017 IPR005524 Predicted permease DUF318 BV404_RS09035 63dbf3006feda2fab01a8045a82cbcce 429 Gene3D G3DSA:3.50.50.60 180 342 3.8E-28 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS09035 63dbf3006feda2fab01a8045a82cbcce 429 SUPERFAMILY SSF51905 3 219 1.22E-28 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS09035 63dbf3006feda2fab01a8045a82cbcce 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 8.0E-14 T 09-03-2017 BV404_RS09035 63dbf3006feda2fab01a8045a82cbcce 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 8.0E-14 T 09-03-2017 BV404_RS09035 63dbf3006feda2fab01a8045a82cbcce 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 167 185 8.0E-14 T 09-03-2017 BV404_RS09035 63dbf3006feda2fab01a8045a82cbcce 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 8.0E-14 T 09-03-2017 BV404_RS09035 63dbf3006feda2fab01a8045a82cbcce 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 4.0E-7 T 09-03-2017 BV404_RS09035 63dbf3006feda2fab01a8045a82cbcce 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 4.0E-7 T 09-03-2017 BV404_RS09035 63dbf3006feda2fab01a8045a82cbcce 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 167 192 4.0E-7 T 09-03-2017 BV404_RS09035 63dbf3006feda2fab01a8045a82cbcce 429 SUPERFAMILY SSF51905 163 347 1.01E-25 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS09035 63dbf3006feda2fab01a8045a82cbcce 429 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 333 2.6E-64 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS09035 63dbf3006feda2fab01a8045a82cbcce 429 Gene3D G3DSA:3.50.50.60 3 179 2.8E-23 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS06140 90b6c65a06525bb6f0b610069e681559 286 SUPERFAMILY SSF103481 40 140 2.48E-11 T 09-03-2017 BV404_RS06140 90b6c65a06525bb6f0b610069e681559 286 SUPERFAMILY SSF103481 183 283 9.42E-15 T 09-03-2017 BV404_RS06140 90b6c65a06525bb6f0b610069e681559 286 Pfam PF00892 EamA-like transporter family 7 137 3.3E-13 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 BV404_RS06140 90b6c65a06525bb6f0b610069e681559 286 Pfam PF00892 EamA-like transporter family 149 278 1.2E-17 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 BV404_RS04370 6825bb76e2e521fff725b4a08cd95821 83 Pfam PF11212 Protein of unknown function (DUF2999) 1 82 3.0E-44 T 09-03-2017 IPR021376 Protein of unknown function DUF2999 BV404_RS01295 300bde958d77045041e173db6b8c1cec 321 Pfam PF01699 Sodium/calcium exchanger protein 175 316 5.5E-28 T 09-03-2017 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 BV404_RS01295 300bde958d77045041e173db6b8c1cec 321 Pfam PF01699 Sodium/calcium exchanger protein 5 143 7.4E-28 T 09-03-2017 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 BV404_RS01295 300bde958d77045041e173db6b8c1cec 321 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 3 311 1.4E-84 T 09-03-2017 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 BV404_RS09595 e35158fde9b0336a5d65368677ac9b58 425 SUPERFAMILY SSF56935 26 425 1.69E-87 T 09-03-2017 BV404_RS09595 e35158fde9b0336a5d65368677ac9b58 425 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 18 425 5.4E-124 T 09-03-2017 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) BV404_RS09595 e35158fde9b0336a5d65368677ac9b58 425 Gene3D G3DSA:2.40.160.60 25 425 1.3E-124 T 09-03-2017 BV404_RS06370 d41e81e756b039afdff63755964e340e 290 Pfam PF13084 Domain of unknown function (DUF3943) 127 236 5.0E-38 T 09-03-2017 IPR025079 Domain of unknown function DUF3943 BV404_RS03415 9ce1bac45db4538100519e900b604059 191 ProSitePatterns PS00201 Flavodoxin signature. 7 23 - T 09-03-2017 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 BV404_RS03415 9ce1bac45db4538100519e900b604059 191 SUPERFAMILY SSF52218 4 188 1.02E-53 T 09-03-2017 IPR029039 Flavoprotein-like domain BV404_RS03415 9ce1bac45db4538100519e900b604059 191 Gene3D G3DSA:3.40.50.360 3 189 6.9E-63 T 09-03-2017 IPR029039 Flavoprotein-like domain BV404_RS03415 9ce1bac45db4538100519e900b604059 191 Pfam PF03358 NADPH-dependent FMN reductase 16 135 2.4E-10 T 09-03-2017 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 BV404_RS05075 0ea198db2871c90a8f1f0fcbdc12e187 640 SUPERFAMILY SSF51735 419 559 1.08E-31 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS05075 0ea198db2871c90a8f1f0fcbdc12e187 640 Gene3D G3DSA:3.40.50.720 417 550 7.2E-35 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS05075 0ea198db2871c90a8f1f0fcbdc12e187 640 Pfam PF02254 TrkA-N domain 422 536 2.5E-24 T 09-03-2017 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 BV404_RS05075 0ea198db2871c90a8f1f0fcbdc12e187 640 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 12 301 8.3E-75 T 09-03-2017 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 BV404_RS05075 0ea198db2871c90a8f1f0fcbdc12e187 640 Pfam PF00999 Sodium/hydrogen exchanger family 10 390 3.7E-57 T 09-03-2017 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 BV404_RS01385 d2e3dfafb8581c954796a36dd282d321 245 Pfam PF00849 RNA pseudouridylate synthase 23 169 3.5E-30 T 09-03-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BV404_RS01385 d2e3dfafb8581c954796a36dd282d321 245 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 60 74 - T 09-03-2017 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 BV404_RS01385 d2e3dfafb8581c954796a36dd282d321 245 SUPERFAMILY SSF55120 14 221 7.2E-65 T 09-03-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 BV404_RS10030 5a36cd72fe6a6e669c25a0b309673d1a 248 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 11 227 7.9E-42 T 09-03-2017 BV404_RS10030 5a36cd72fe6a6e669c25a0b309673d1a 248 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 5 245 28.754 T 09-03-2017 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 BV404_RS03090 b17285467efee61baa27060c4b76ffbf 147 Pfam PF04214 Protein of unknown function, DUF 48 117 3.5E-32 T 09-03-2017 IPR007332 Protein of unknown function DUF411 BV404_RS08005 5d61d7359486d0872a5d3d64e0972eba 474 PIRSF PIRSF000977 1 474 2.2E-196 T 09-03-2017 IPR023607 Exodeoxyribonuclease I GO:0004529 BV404_RS08005 5d61d7359486d0872a5d3d64e0972eba 474 SUPERFAMILY SSF53098 7 472 9.49E-135 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 BV404_RS08005 5d61d7359486d0872a5d3d64e0972eba 474 Gene3D G3DSA:3.30.420.10 1 197 2.6E-82 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 BV404_RS08005 5d61d7359486d0872a5d3d64e0972eba 474 Pfam PF00929 Exonuclease 11 191 2.3E-22 T 09-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III BV404_RS08005 5d61d7359486d0872a5d3d64e0972eba 474 Pfam PF08411 Exonuclease C-terminal 210 470 6.4E-103 T 09-03-2017 IPR013620 Exonuclease C-terminal GO:0006281|GO:0008852 BV404_RS01070 b14788b4e6785e0dd8430ca083031648 162 Pfam PF11075 Protein of unknown function VcgC/VcgE (DUF2780) 13 157 1.2E-36 T 09-03-2017 IPR021302 Protein of unknown function DUF2780, VcgC/VcgE BV404_RS01070 b14788b4e6785e0dd8430ca083031648 162 Gene3D G3DSA:3.80.10.10 72 130 7.1E-4 T 09-03-2017 IPR032675 Leucine-rich repeat domain, L domain-like BV404_RS20015 d94b5e08a04781f6419ad1d8abceab4c 236 SUPERFAMILY SSF56935 2 236 4.76E-42 T 09-03-2017 BV404_RS20015 d94b5e08a04781f6419ad1d8abceab4c 236 Gene3D G3DSA:2.170.130.10 2 34 5.4E-8 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 BV404_RS20015 d94b5e08a04781f6419ad1d8abceab4c 236 Gene3D G3DSA:2.40.170.20 38 236 3.7E-48 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 BV404_RS08945 7561abfa3e5883045c1028810f3e40a8 166 SUPERFAMILY SSF116960 1 166 9.94E-64 T 09-03-2017 BV404_RS08945 7561abfa3e5883045c1028810f3e40a8 166 Gene3D G3DSA:1.10.3190.10 53 166 1.2E-46 T 09-03-2017 IPR023146 YfbU, alpha-helical bundle domain BV404_RS08945 7561abfa3e5883045c1028810f3e40a8 166 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 166 2.0E-77 T 09-03-2017 IPR005587 Uncharacterised protein family UPF0304, YfbU BV404_RS08945 7561abfa3e5883045c1028810f3e40a8 166 Pfam PF03887 YfbU domain 1 166 5.8E-71 T 09-03-2017 IPR005587 Uncharacterised protein family UPF0304, YfbU BV404_RS08945 7561abfa3e5883045c1028810f3e40a8 166 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 166 37.745 T 09-03-2017 IPR005587 Uncharacterised protein family UPF0304, YfbU BV404_RS08945 7561abfa3e5883045c1028810f3e40a8 166 Gene3D G3DSA:1.10.287.680 1 52 2.8E-30 T 09-03-2017 IPR023145 YfbU, helix-hairpin domain BV404_RS08945 7561abfa3e5883045c1028810f3e40a8 166 PIRSF PIRSF006272 1 166 2.2E-77 T 09-03-2017 IPR005587 Uncharacterised protein family UPF0304, YfbU BV404_RS14640 b9e4ad95bd1cee30b5fc5ee48ad4b2c2 242 Gene3D G3DSA:3.40.50.10090 143 241 8.4E-8 T 09-03-2017 BV404_RS14640 b9e4ad95bd1cee30b5fc5ee48ad4b2c2 242 Gene3D G3DSA:3.40.50.10090 30 142 6.0E-14 T 09-03-2017 BV404_RS14640 b9e4ad95bd1cee30b5fc5ee48ad4b2c2 242 Pfam PF02602 Uroporphyrinogen-III synthase HemD 15 237 3.2E-33 T 09-03-2017 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BV404_RS14640 b9e4ad95bd1cee30b5fc5ee48ad4b2c2 242 SUPERFAMILY SSF69618 1 241 9.55E-51 T 09-03-2017 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BV404_RS07035 5e16861b5851f6073338cb25d2c26a5f 175 Pfam PF11748 Protein of unknown function (DUF3306) 5 108 5.8E-18 T 09-03-2017 IPR021735 Protein of unknown function DUF3306 BV404_RS12550 417cfd3d04f49e06c45158b33a701738 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 9 154 2.1E-37 T 09-03-2017 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 BV404_RS12550 417cfd3d04f49e06c45158b33a701738 162 Pfam PF04093 rod shape-determining protein MreD 8 154 1.5E-41 T 09-03-2017 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 BV404_RS12550 417cfd3d04f49e06c45158b33a701738 162 PIRSF PIRSF018472 1 162 2.3E-43 T 09-03-2017 IPR026034 Cell shape-determining protein MreD, proteobacterial type BV404_RS13045 f8ef0b09e936bc5b1b00662e55d244b4 378 Gene3D G3DSA:2.70.70.10 235 377 1.5E-34 T 09-03-2017 BV404_RS13045 f8ef0b09e936bc5b1b00662e55d244b4 378 Pfam PF01551 Peptidase family M23 279 372 2.4E-24 T 09-03-2017 IPR016047 Peptidase M23 BV404_RS13045 f8ef0b09e936bc5b1b00662e55d244b4 378 SUPERFAMILY SSF51261 175 376 1.52E-46 T 09-03-2017 IPR011055 Duplicated hybrid motif BV404_RS13045 f8ef0b09e936bc5b1b00662e55d244b4 378 ProDom PD936484 POLYPROTEIN GLYCOPROTEIN M G2 TRANSMEMBRANE NONSTRUCTURAL MEMBRANE CONTAINS: PRECURSOR SIGNAL 71 235 0.002 T 09-03-2017 BV404_RS07660 15d8e88fa4fdaef1027b45725f222d7d 380 Gene3D G3DSA:2.130.10.10 22 348 1.5E-61 T 09-03-2017 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 BV404_RS07660 15d8e88fa4fdaef1027b45725f222d7d 380 Pfam PF06433 Methylamine dehydrogenase heavy chain (MADH) 43 377 1.3E-23 T 09-03-2017 IPR009451 Amine dehydrogenase heavy chain GO:0030058|GO:0042597|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967 BV404_RS07660 15d8e88fa4fdaef1027b45725f222d7d 380 SUPERFAMILY SSF50969 29 344 1.06E-46 T 09-03-2017 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like BV404_RS08810 206b156477aebe54105ae66ffc36c256 378 PIRSF PIRSF000267 2 377 5.7E-125 T 09-03-2017 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 BV404_RS08810 206b156477aebe54105ae66ffc36c256 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 3.0E-174 T 09-03-2017 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 BV404_RS08810 206b156477aebe54105ae66ffc36c256 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 361 3.7E-109 T 09-03-2017 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 BV404_RS03990 1a433d623eb845d8fae27889f366ac18 407 SUPERFAMILY SSF48452 164 274 4.93E-12 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BV404_RS03990 1a433d623eb845d8fae27889f366ac18 407 Gene3D G3DSA:1.25.40.10 164 206 1.5E-4 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BV404_RS03990 1a433d623eb845d8fae27889f366ac18 407 Gene3D G3DSA:1.25.40.10 207 290 1.4E-18 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BV404_RS03990 1a433d623eb845d8fae27889f366ac18 407 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 3 116 1.2E-32 T 09-03-2017 IPR017560 Cytochrome c-type biogenesis protein CcmI BV404_RS03990 1a433d623eb845d8fae27889f366ac18 407 Pfam PF14559 Tetratricopeptide repeat 179 247 2.5E-8 T 09-03-2017 BV404_RS17905 6c31d7e5064d2f9bd751976530893235 249 SUPERFAMILY SSF56645 2 186 1.07E-35 T 09-03-2017 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 BV404_RS17905 6c31d7e5064d2f9bd751976530893235 249 SUPERFAMILY SSF47203 191 249 4.99E-8 T 09-03-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 BV404_RS17905 6c31d7e5064d2f9bd751976530893235 249 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 2 64 1.3E-10 T 09-03-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 BV404_RS17905 6c31d7e5064d2f9bd751976530893235 249 Gene3D G3DSA:1.20.140.10 179 249 6.2E-11 T 09-03-2017 BV404_RS17905 6c31d7e5064d2f9bd751976530893235 249 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 68 158 2.8E-8 T 09-03-2017 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 BV404_RS17905 6c31d7e5064d2f9bd751976530893235 249 Gene3D G3DSA:2.40.110.10 68 178 4.6E-16 T 09-03-2017 BV404_RS17905 6c31d7e5064d2f9bd751976530893235 249 Gene3D G3DSA:1.10.540.10 2 65 8.7E-16 T 09-03-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 BV404_RS09555 b3473a93e0aea032093879a10fe4c556 134 PIRSF PIRSF016789 8 129 1.1E-43 T 09-03-2017 IPR007401 Protein of unknown function DUF454 BV404_RS09555 b3473a93e0aea032093879a10fe4c556 134 Pfam PF04304 Protein of unknown function (DUF454) 10 123 2.2E-39 T 09-03-2017 IPR007401 Protein of unknown function DUF454 BV404_RS02675 b069f0c474cf7ea34065d21462dab1e0 191 Pfam PF03923 Uncharacterized lipoprotein 28 186 1.7E-50 T 09-03-2017 IPR005619 Uncharacterised protein family, YajG BV404_RS04880 bf47cbcbbd090b3174caf2abb8249d81 178 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 39 175 5.9E-33 T 09-03-2017 IPR005247 YbhB/YbcL BV404_RS04880 bf47cbcbbd090b3174caf2abb8249d81 178 SUPERFAMILY SSF49777 22 178 7.59E-47 T 09-03-2017 IPR008914 Phosphatidylethanolamine-binding protein BV404_RS04880 bf47cbcbbd090b3174caf2abb8249d81 178 Pfam PF01161 Phosphatidylethanolamine-binding protein 41 175 1.8E-34 T 09-03-2017 IPR008914 Phosphatidylethanolamine-binding protein BV404_RS04880 bf47cbcbbd090b3174caf2abb8249d81 178 Gene3D G3DSA:3.90.280.10 21 178 1.5E-49 T 09-03-2017 IPR008914 Phosphatidylethanolamine-binding protein BV404_RS02155 ff087904103e77e9da03fa03a17075ad 430 SUPERFAMILY SSF53383 1 423 1.39E-134 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase BV404_RS02155 ff087904103e77e9da03fa03a17075ad 430 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 104.761 T 09-03-2017 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 BV404_RS02155 ff087904103e77e9da03fa03a17075ad 430 Pfam PF00202 Aminotransferase class-III 33 396 1.7E-76 T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BV404_RS02155 ff087904103e77e9da03fa03a17075ad 430 Gene3D G3DSA:3.90.1150.10 319 424 2.4E-44 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 BV404_RS02155 ff087904103e77e9da03fa03a17075ad 430 Gene3D G3DSA:3.90.1150.10 2 69 2.4E-44 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 BV404_RS02155 ff087904103e77e9da03fa03a17075ad 430 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 424 4.3E-193 T 09-03-2017 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 BV404_RS02155 ff087904103e77e9da03fa03a17075ad 430 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BV404_RS02155 ff087904103e77e9da03fa03a17075ad 430 Gene3D G3DSA:3.40.640.10 71 316 9.8E-83 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 BV404_RS15585 416bfddea2a3d338c469a7ebfafd2f77 66 SUPERFAMILY SSF48557 1 65 2.36E-21 T 09-03-2017 IPR008948 L-Aspartase-like GO:0003824 BV404_RS15585 416bfddea2a3d338c469a7ebfafd2f77 66 Gene3D G3DSA:1.20.200.10 2 65 9.5E-23 T 09-03-2017 BV404_RS15585 416bfddea2a3d338c469a7ebfafd2f77 66 Pfam PF00206 Lyase 1 65 3.0E-19 T 09-03-2017 IPR022761 Fumarate lyase, N-terminal BV404_RS09120 14acae31854a236439341a277797d02a 396 Pfam PF13679 Methyltransferase domain 120 229 2.9E-16 T 09-03-2017 IPR025714 Methyltransferase domain BV404_RS09120 14acae31854a236439341a277797d02a 396 Gene3D G3DSA:3.40.50.150 119 179 2.8E-8 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS09120 14acae31854a236439341a277797d02a 396 SUPERFAMILY SSF53335 123 180 2.5E-7 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS08370 950c39f79566df2d21c9daa523f8bdfb 107 Pfam PF11872 Protein of unknown function (DUF3392) 2 104 4.6E-39 T 09-03-2017 IPR021813 Protein of unknown function DUF3392 BV404_RS02795 2a52fed34df46b706c317439affe0062 205 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 32 162 3.1E-26 T 09-03-2017 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component BV404_RS09880 7c2618138c96e68a00989784af952dff 1523 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 70 142 1.5E-25 T 09-03-2017 IPR020012 Motility protein FimV, N-terminal BV404_RS09880 7c2618138c96e68a00989784af952dff 1523 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 1477 1518 5.1E-15 T 09-03-2017 IPR020011 Motility protein FimV, C-terminal BV404_RS07000 c4339b5d8b312ee91d741727210d137f 271 Gene3D G3DSA:3.40.190.10 13 154 4.9E-45 T 09-03-2017 BV404_RS07000 c4339b5d8b312ee91d741727210d137f 271 Pfam PF12849 PBP superfamily domain 30 248 9.1E-30 T 09-03-2017 IPR024370 PBP domain BV404_RS07000 c4339b5d8b312ee91d741727210d137f 271 Gene3D G3DSA:3.40.190.10 189 270 2.4E-28 T 09-03-2017 BV404_RS07000 c4339b5d8b312ee91d741727210d137f 271 SUPERFAMILY SSF53850 29 257 5.8E-31 T 09-03-2017 BV404_RS04800 f997c298962c742403f72b98f7d99aab 262 Pfam PF05114 Protein of unknown function (DUF692) 15 256 5.7E-29 T 09-03-2017 IPR007801 Uncharacterised protein family UPF0276 BV404_RS04800 f997c298962c742403f72b98f7d99aab 262 SUPERFAMILY SSF51658 23 206 5.88E-6 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain BV404_RS04800 f997c298962c742403f72b98f7d99aab 262 Gene3D G3DSA:3.20.20.150 2 259 1.4E-29 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain BV404_RS16810 d6a249120704d27aee516b54ac014b69 122 Gene3D G3DSA:3.30.2060.10 95 122 1.6E-4 T 09-03-2017 BV404_RS16810 d6a249120704d27aee516b54ac014b69 122 Gene3D G3DSA:1.20.5.100 41 79 1.3E-5 T 09-03-2017 BV404_RS09225 449cdb1872663eed7a52f56b8587492c 453 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 437 3.3E-116 T 09-03-2017 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit BV404_RS09225 449cdb1872663eed7a52f56b8587492c 453 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 260 3.8E-85 T 09-03-2017 IPR004681 TRAP transporter permease protein GO:0016021 BV404_RS07165 9c0a010f3a84b893059bd60dd0b42e82 57 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 6 45 9.7E-15 T 09-03-2017 IPR008621 Cbb3-type cytochrome oxidase component BV404_RS05945 e1b6c87229901cfc909b9dd98d879d16 255 Pfam PF11150 Protein of unknown function (DUF2927) 27 226 5.5E-63 T 09-03-2017 IPR021323 Protein of unknown function DUF2927 BV404_RS01670 3d05ff2108e9492e821d8cdcfaa1d9f8 102 SUPERFAMILY SSF102829 6 95 3.4E-24 T 09-03-2017 IPR007838 Cell division protein ZapA-like BV404_RS01670 3d05ff2108e9492e821d8cdcfaa1d9f8 102 Pfam PF05164 Cell division protein ZapA 6 89 2.8E-21 T 09-03-2017 IPR007838 Cell division protein ZapA-like BV404_RS14115 f31abf30de3c477170b3dd5a538054f2 145 Pfam PF00011 Hsp20/alpha crystallin family 43 137 1.1E-20 T 09-03-2017 IPR002068 Alpha crystallin/Hsp20 domain BV404_RS14115 f31abf30de3c477170b3dd5a538054f2 145 SUPERFAMILY SSF49764 6 138 9.77E-23 T 09-03-2017 IPR008978 HSP20-like chaperone BV404_RS14115 f31abf30de3c477170b3dd5a538054f2 145 Gene3D G3DSA:2.60.40.790 5 137 1.7E-18 T 09-03-2017 IPR008978 HSP20-like chaperone BV404_RS13570 0e97c4856f4e4f7724b81b9f137decc2 346 SUPERFAMILY SSF53756 2 341 8.37E-62 T 09-03-2017 BV404_RS13570 0e97c4856f4e4f7724b81b9f137decc2 346 Pfam PF13439 Glycosyltransferase Family 4 13 147 5.4E-7 T 09-03-2017 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 BV404_RS13570 0e97c4856f4e4f7724b81b9f137decc2 346 Gene3D G3DSA:3.40.50.2000 169 314 3.3E-26 T 09-03-2017 BV404_RS13570 0e97c4856f4e4f7724b81b9f137decc2 346 Pfam PF00534 Glycosyl transferases group 1 165 314 3.3E-29 T 09-03-2017 IPR001296 Glycosyl transferase, family 1 BV404_RS03185 9411168fc729af24b20ebb8ca065365a 138 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 92 136 4.0E-12 T 09-03-2017 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BV404_RS03185 9411168fc729af24b20ebb8ca065365a 138 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 138 7.8E-52 T 09-03-2017 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 BV404_RS03185 9411168fc729af24b20ebb8ca065365a 138 Pfam PF00460 Flagella basal body rod protein 7 32 1.8E-7 T 09-03-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BV404_RS03185 9411168fc729af24b20ebb8ca065365a 138 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 09-03-2017 IPR019776 Flagellar basal body rod protein, conserved site BV404_RS05385 cde322fd1a2e1cd8d52e73bebbba541d 355 SUPERFAMILY SSF53335 97 338 5.13E-37 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS05385 cde322fd1a2e1cd8d52e73bebbba541d 355 Pfam PF00891 O-methyltransferase 169 332 1.9E-11 T 09-03-2017 IPR001077 O-methyltransferase, family 2 GO:0008171 BV404_RS05385 cde322fd1a2e1cd8d52e73bebbba541d 355 Gene3D G3DSA:3.40.50.150 97 337 8.6E-34 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS05385 cde322fd1a2e1cd8d52e73bebbba541d 355 SUPERFAMILY SSF46785 17 97 2.59E-7 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS05140 c970466598f72574fc737f00b450135c 347 SUPERFAMILY SSF81345 19 343 9.81E-68 T 09-03-2017 IPR029022 ABC transporter, BtuC-like BV404_RS05140 c970466598f72574fc737f00b450135c 347 Pfam PF01032 FecCD transport family 36 343 9.2E-79 T 09-03-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 BV404_RS05140 c970466598f72574fc737f00b450135c 347 Gene3D G3DSA:1.10.3470.10 27 345 2.7E-85 T 09-03-2017 IPR029022 ABC transporter, BtuC-like BV404_RS11585 19d4f798f17d381af1c330947d96f092 185 SUPERFAMILY SSF52218 1 183 1.31E-42 T 09-03-2017 IPR029039 Flavoprotein-like domain BV404_RS11585 19d4f798f17d381af1c330947d96f092 185 Pfam PF03358 NADPH-dependent FMN reductase 10 132 7.0E-18 T 09-03-2017 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 BV404_RS11585 19d4f798f17d381af1c330947d96f092 185 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 09-03-2017 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 BV404_RS11585 19d4f798f17d381af1c330947d96f092 185 Gene3D G3DSA:3.40.50.360 1 184 5.5E-50 T 09-03-2017 IPR029039 Flavoprotein-like domain BV404_RS14780 254cf50c483a2ec9654a4772ba7e4271 195 Pfam PF01914 MarC family integral membrane protein 3 191 2.8E-53 T 09-03-2017 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 BV404_RS10600 59a02f102cfd99b00cfaa3ad158825ca 243 SUPERFAMILY SSF55120 2 237 3.04E-62 T 09-03-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 BV404_RS10600 59a02f102cfd99b00cfaa3ad158825ca 243 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 50 64 - T 09-03-2017 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 BV404_RS10600 59a02f102cfd99b00cfaa3ad158825ca 243 Pfam PF00849 RNA pseudouridylate synthase 11 170 2.1E-31 T 09-03-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BV404_RS00165 4547fa5f62bf5bd99b56827d7c193ffa 212 Pfam PF11172 Protein of unknown function (DUF2959) 13 210 9.5E-88 T 09-03-2017 IPR021342 Protein of unknown function DUF2959 BV404_RS12800 e1080d6a335ad6129f57264042a12a56 153 Pfam PF13690 Chemotaxis phosphatase CheX 42 139 6.8E-22 T 09-03-2017 IPR028051 Chemotaxis phosphatase CheX-like domain BV404_RS12800 e1080d6a335ad6129f57264042a12a56 153 Gene3D G3DSA:3.40.1550.10 1 153 8.0E-44 T 09-03-2017 IPR028976 CheC-like domain BV404_RS12800 e1080d6a335ad6129f57264042a12a56 153 SUPERFAMILY SSF103039 1 153 9.29E-38 T 09-03-2017 IPR028976 CheC-like domain BV404_RS04185 aec6b79294409fd407c188cf80aea1bc 294 Pfam PF00520 Ion transport protein 23 236 1.2E-31 T 09-03-2017 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 BV404_RS04185 aec6b79294409fd407c188cf80aea1bc 294 SUPERFAMILY SSF81324 21 235 1.14E-53 T 09-03-2017 BV404_RS04185 aec6b79294409fd407c188cf80aea1bc 294 PRINTS PR00169 Potassium channel signature 84 104 9.6E-39 T 09-03-2017 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 BV404_RS04185 aec6b79294409fd407c188cf80aea1bc 294 PRINTS PR00169 Potassium channel signature 178 200 9.6E-39 T 09-03-2017 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 BV404_RS04185 aec6b79294409fd407c188cf80aea1bc 294 PRINTS PR00169 Potassium channel signature 16 44 9.6E-39 T 09-03-2017 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 BV404_RS04185 aec6b79294409fd407c188cf80aea1bc 294 PRINTS PR00169 Potassium channel signature 120 146 9.6E-39 T 09-03-2017 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 BV404_RS04185 aec6b79294409fd407c188cf80aea1bc 294 PRINTS PR00169 Potassium channel signature 207 233 9.6E-39 T 09-03-2017 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 BV404_RS04185 aec6b79294409fd407c188cf80aea1bc 294 PRINTS PR00169 Potassium channel signature 58 81 9.6E-39 T 09-03-2017 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 BV404_RS04185 aec6b79294409fd407c188cf80aea1bc 294 PRINTS PR00169 Potassium channel signature 149 172 9.6E-39 T 09-03-2017 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 BV404_RS04185 aec6b79294409fd407c188cf80aea1bc 294 Gene3D G3DSA:1.10.287.70 23 233 1.8E-54 T 09-03-2017 BV404_RS00845 5287b41d6d79b731b2f3b068ef144038 264 SMART SM01150 3 262 1.1E-118 T 09-03-2017 IPR009770 Domain of unknown function DUF1338 BV404_RS00845 5287b41d6d79b731b2f3b068ef144038 264 Pfam PF07063 Domain of unknown function (DUF1338) 30 261 3.6E-48 T 09-03-2017 IPR009770 Domain of unknown function DUF1338 BV404_RS07045 440d13303fe70e113a14de6aa920d3c4 214 SUPERFAMILY SSF89155 9 197 1.22E-53 T 09-03-2017 IPR020945 DMSO/Nitrate reductase chaperone BV404_RS07045 440d13303fe70e113a14de6aa920d3c4 214 Gene3D G3DSA:1.10.3480.10 6 194 5.8E-53 T 09-03-2017 IPR020945 DMSO/Nitrate reductase chaperone BV404_RS07045 440d13303fe70e113a14de6aa920d3c4 214 Pfam PF02613 Nitrate reductase delta subunit 46 160 1.1E-31 T 09-03-2017 IPR020945 DMSO/Nitrate reductase chaperone BV404_RS14685 0f69bcbb9a3e7be03a24ba9e843c1417 239 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 101 199 6.9E-11 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 BV404_RS14685 0f69bcbb9a3e7be03a24ba9e843c1417 239 Gene3D G3DSA:3.40.50.1000 107 238 1.3E-28 T 09-03-2017 IPR023214 HAD-like domain BV404_RS14685 0f69bcbb9a3e7be03a24ba9e843c1417 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 150 166 5.4E-5 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 BV404_RS14685 0f69bcbb9a3e7be03a24ba9e843c1417 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 196 209 5.4E-5 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 BV404_RS14685 0f69bcbb9a3e7be03a24ba9e843c1417 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 10 21 5.4E-5 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 BV404_RS14685 0f69bcbb9a3e7be03a24ba9e843c1417 239 Pfam PF00702 haloacid dehalogenase-like hydrolase 10 200 1.4E-10 T 09-03-2017 BV404_RS14685 0f69bcbb9a3e7be03a24ba9e843c1417 239 Gene3D G3DSA:1.10.8.10 83 106 4.9E-4 T 09-03-2017 BV404_RS14685 0f69bcbb9a3e7be03a24ba9e843c1417 239 SUPERFAMILY SSF56784 9 238 3.12E-38 T 09-03-2017 IPR023214 HAD-like domain BV404_RS21655 745b5d56f735646b38fbf502afccfcf2 61 SUPERFAMILY SSF54593 1 57 7.74E-8 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BV404_RS21655 745b5d56f735646b38fbf502afccfcf2 61 Gene3D G3DSA:3.10.180.10 1 61 7.1E-15 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BV404_RS06085 f51f6c3416cef648bc5a8503da269bf8 208 Pfam PF01066 CDP-alcohol phosphatidyltransferase 27 89 3.0E-9 T 09-03-2017 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 BV404_RS06085 f51f6c3416cef648bc5a8503da269bf8 208 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 89 - T 09-03-2017 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 BV404_RS06825 426a21a08f71ae5ac6fbbe3f2e2eda94 276 Pfam PF02517 CAAX protease self-immunity 174 263 1.0E-17 T 09-03-2017 IPR003675 CAAX amino terminal protease GO:0016020 BV404_RS09970 2a4c37d9a0afd285985621444c0644f0 264 Pfam PF07556 Protein of unknown function (DUF1538) 21 246 1.9E-70 T 09-03-2017 IPR011435 Protein of unknown function DUF1538 BV404_RS04530 b9dab55e3025be0c67bbac7a68cbfbf0 398 Pfam PF00460 Flagella basal body rod protein 3 33 2.9E-9 T 09-03-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BV404_RS04530 b9dab55e3025be0c67bbac7a68cbfbf0 398 SUPERFAMILY SSF117143 73 359 2.88E-80 T 09-03-2017 BV404_RS04530 b9dab55e3025be0c67bbac7a68cbfbf0 398 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 380 1.9E-95 T 09-03-2017 IPR020013 Fagellar hook-basal body protein, FlgE/F/G BV404_RS04530 b9dab55e3025be0c67bbac7a68cbfbf0 398 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 320 396 8.0E-17 T 09-03-2017 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BV404_RS04530 b9dab55e3025be0c67bbac7a68cbfbf0 398 Pfam PF07559 Flagellar basal body protein FlaE 172 279 7.5E-24 T 09-03-2017 IPR011491 Flagellar hook protein FlgE BV404_RS01180 5a2bdb9c85512dc10f41f9a16e6b1ff2 1253 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 916 1252 4.3E-64 T 09-03-2017 IPR007452 Translocation and assembly module TamB BV404_RS04395 663ab734b60048f74d9db593717ec755 178 Gene3D G3DSA:2.40.160.20 14 157 3.8E-9 T 09-03-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 BV404_RS04395 663ab734b60048f74d9db593717ec755 178 Pfam PF13505 Outer membrane protein beta-barrel domain 10 178 1.4E-15 T 09-03-2017 IPR027385 Outer membrane protein beta-barrel BV404_RS04395 663ab734b60048f74d9db593717ec755 178 SUPERFAMILY SSF56925 25 178 7.06E-11 T 09-03-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 BV404_RS04515 18e6191bcde5276de9d8b84ff920cd5f 120 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 09-03-2017 IPR019776 Flagellar basal body rod protein, conserved site BV404_RS04515 18e6191bcde5276de9d8b84ff920cd5f 120 Pfam PF00460 Flagella basal body rod protein 11 38 2.7E-7 T 09-03-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BV404_RS04515 18e6191bcde5276de9d8b84ff920cd5f 120 PIRSF PIRSF002889 1 120 1.5E-31 T 09-03-2017 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 BV404_RS04515 18e6191bcde5276de9d8b84ff920cd5f 120 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 118 1.1E-31 T 09-03-2017 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 BV404_RS08855 d32f51b5b42ffdad9f48aa47f8100014 155 Pfam PF02810 SEC-C motif 138 154 1.2E-7 T 09-03-2017 IPR004027 SEC-C motif BV404_RS08855 d32f51b5b42ffdad9f48aa47f8100014 155 Pfam PF02810 SEC-C motif 3 18 3.8E-5 T 09-03-2017 IPR004027 SEC-C motif BV404_RS08855 d32f51b5b42ffdad9f48aa47f8100014 155 SUPERFAMILY SSF103642 135 154 3.27E-6 T 09-03-2017 BV404_RS08855 d32f51b5b42ffdad9f48aa47f8100014 155 SUPERFAMILY SSF54427 24 127 1.58E-32 T 09-03-2017 IPR032710 NTF2-like domain BV404_RS08855 d32f51b5b42ffdad9f48aa47f8100014 155 Gene3D G3DSA:3.10.450.50 2 154 1.9E-51 T 09-03-2017 IPR032710 NTF2-like domain BV404_RS00545 f62b5cf89240bcf0b3339339f842961d 72 SUPERFAMILY SSF143800 1 68 2.67E-27 T 09-03-2017 BV404_RS00545 f62b5cf89240bcf0b3339339f842961d 72 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 69 31.955 T 09-03-2017 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS00545 f62b5cf89240bcf0b3339339f842961d 72 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 09-03-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS00545 f62b5cf89240bcf0b3339339f842961d 72 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 67 2.7E-35 T 09-03-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS00545 f62b5cf89240bcf0b3339339f842961d 72 Pfam PF01197 Ribosomal protein L31 1 66 1.8E-31 T 09-03-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS00545 f62b5cf89240bcf0b3339339f842961d 72 PRINTS PR01249 Ribosomal protein L31 signature 32 47 8.9E-23 T 09-03-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS00545 f62b5cf89240bcf0b3339339f842961d 72 PRINTS PR01249 Ribosomal protein L31 signature 2 19 8.9E-23 T 09-03-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS00545 f62b5cf89240bcf0b3339339f842961d 72 PRINTS PR01249 Ribosomal protein L31 signature 47 65 8.9E-23 T 09-03-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BV404_RS11375 5b4d62c171893c1a79906e31871e8c21 782 SUPERFAMILY SSF141371 466 526 1.22E-5 T 09-03-2017 BV404_RS11375 5b4d62c171893c1a79906e31871e8c21 782 Pfam PF07238 PilZ domain 470 555 1.5E-10 T 09-03-2017 IPR009875 PilZ domain GO:0035438 BV404_RS11375 5b4d62c171893c1a79906e31871e8c21 782 Pfam PF07238 PilZ domain 144 233 1.2E-7 T 09-03-2017 IPR009875 PilZ domain GO:0035438 BV404_RS08645 b21af87eedf5f26cc23c44aee0a1dc4b 423 Pfam PF06097 Bacterial protein of unknown function (DUF945) 7 410 4.2E-35 T 09-03-2017 IPR010352 Protein of unknown function DUF945 BV404_RS09515 c4d5f8126efc9c989dcfecab372fa425 300 ProDom PD936484 POLYPROTEIN GLYCOPROTEIN M G2 TRANSMEMBRANE NONSTRUCTURAL MEMBRANE CONTAINS: PRECURSOR SIGNAL 18 184 0.004 T 09-03-2017 BV404_RS09515 c4d5f8126efc9c989dcfecab372fa425 300 Gene3D G3DSA:3.20.20.120 40 144 5.7E-4 T 09-03-2017 IPR029065 Enolase C-terminal domain-like BV404_RS01255 6f1e612cb8f7aae4b3cadae126e5dce5 150 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 9 145 1.8E-36 T 09-03-2017 IPR002178 PTS EIIA type-2 domain BV404_RS01255 6f1e612cb8f7aae4b3cadae126e5dce5 150 Gene3D G3DSA:3.40.930.10 1 147 3.7E-44 T 09-03-2017 IPR002178 PTS EIIA type-2 domain BV404_RS01255 6f1e612cb8f7aae4b3cadae126e5dce5 150 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 09-03-2017 IPR002178 PTS EIIA type-2 domain BV404_RS01255 6f1e612cb8f7aae4b3cadae126e5dce5 150 SUPERFAMILY SSF55804 1 146 2.88E-39 T 09-03-2017 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 BV404_RS01255 6f1e612cb8f7aae4b3cadae126e5dce5 150 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 2 146 5.5E-51 T 09-03-2017 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 BV404_RS08620 02c074e52be31088e4b190306b368fa1 754 Pfam PF11308 Glycosyl hydrolases related to GH101 family, GH129 384 708 2.5E-147 T 09-03-2017 IPR021459 Glycosyl hydrolases related to GH101 family, GHL1-GHL3 BV404_RS05940 68d40d751f99a519cb618d5ad6fbded9 129 Pfam PF11042 Protein of unknown function (DUF2750) 23 122 1.5E-36 T 09-03-2017 IPR021284 Protein of unknown function DUF2750 BV404_RS13500 f26169a4ba3dad6184c3fd5c57d4c369 207 SUPERFAMILY SSF52540 30 204 1.14E-39 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS13500 f26169a4ba3dad6184c3fd5c57d4c369 207 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 33 205 38.571 T 09-03-2017 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 BV404_RS13500 f26169a4ba3dad6184c3fd5c57d4c369 207 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 17 201 1.2E-85 T 09-03-2017 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 BV404_RS13500 f26169a4ba3dad6184c3fd5c57d4c369 207 Gene3D G3DSA:3.40.50.300 12 207 7.1E-90 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS13500 f26169a4ba3dad6184c3fd5c57d4c369 207 Pfam PF01583 Adenylylsulphate kinase 34 189 2.2E-74 T 09-03-2017 BV404_RS08410 23630f6e9944799ca57934b8ac2b9dbe 218 Pfam PF10014 2OG-Fe dioxygenase 24 208 4.1E-52 T 09-03-2017 IPR018724 2OG-Fe dioxygenase BV404_RS07890 b6a45e66ba878bac4343de4232a06e71 171 Pfam PF01863 Protein of unknown function DUF45 97 150 2.7E-11 T 09-03-2017 IPR002725 Protein of unknown function DUF45 BV404_RS12580 75a49e8fed6eaa3d1592e47e48068099 188 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 26 9.7E-6 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site BV404_RS12580 75a49e8fed6eaa3d1592e47e48068099 188 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 22 1.2E-4 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site BV404_RS13405 9a2b79785666842d24ef10c86381878a 137 Pfam PF02681 Divergent PAP2 family 4 127 7.2E-33 T 09-03-2017 IPR003832 Acid phosphatase/vanadium-dependent haloperoxidase-related BV404_RS04060 7610a0aa940e6af2711b292439390c3e 164 Gene3D G3DSA:3.40.50.720 5 98 6.5E-6 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS04060 7610a0aa940e6af2711b292439390c3e 164 SUPERFAMILY SSF51735 4 126 8.11E-6 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS05900 5ff323f89c0cee88c68d37b46a352fe4 266 Pfam PF03649 Uncharacterised protein family (UPF0014) 9 247 3.2E-74 T 09-03-2017 IPR005226 UPF0014 family BV404_RS03080 652622211467b5f23ce5fb8924302339 272 Pfam PF01963 TraB family 7 260 3.9E-53 T 09-03-2017 IPR002816 Pheromone shutdown, TraB BV404_RS09085 562f48cb99bacd48913aad3b41e85a1a 530 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 530 374.916 T 09-03-2017 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 BV404_RS09085 562f48cb99bacd48913aad3b41e85a1a 530 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 516 1.8E-304 T 09-03-2017 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 BV404_RS09085 562f48cb99bacd48913aad3b41e85a1a 530 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 515 2.5E-297 T 09-03-2017 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 BV404_RS06300 39a167daf8078fe6d8a7f9f8400215a7 192 Gene3D G3DSA:4.10.1080.10 22 61 1.8E-6 T 09-03-2017 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 BV404_RS06300 39a167daf8078fe6d8a7f9f8400215a7 192 SUPERFAMILY SSF103088 44 172 1.44E-32 T 09-03-2017 IPR006665 OmpA-like domain BV404_RS06300 39a167daf8078fe6d8a7f9f8400215a7 192 Pfam PF00691 OmpA family 72 167 1.9E-22 T 09-03-2017 IPR006665 OmpA-like domain BV404_RS06300 39a167daf8078fe6d8a7f9f8400215a7 192 PRINTS PR01021 OMPA domain signature 118 134 1.9E-11 T 09-03-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BV404_RS06300 39a167daf8078fe6d8a7f9f8400215a7 192 PRINTS PR01021 OMPA domain signature 73 95 1.9E-11 T 09-03-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BV404_RS06300 39a167daf8078fe6d8a7f9f8400215a7 192 PRINTS PR01021 OMPA domain signature 103 118 1.9E-11 T 09-03-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BV404_RS06300 39a167daf8078fe6d8a7f9f8400215a7 192 Gene3D G3DSA:3.30.1330.60 66 174 9.3E-34 T 09-03-2017 IPR006665 OmpA-like domain BV404_RS06300 39a167daf8078fe6d8a7f9f8400215a7 192 SUPERFAMILY SSF103647 11 59 1.7E-9 T 09-03-2017 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 BV404_RS05040 a7deb3d4a5ffea5148fd271f9fb7816c 335 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 5 215 2.2E-43 T 09-03-2017 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 BV404_RS05040 a7deb3d4a5ffea5148fd271f9fb7816c 335 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 5 324 2.6E-97 T 09-03-2017 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 BV404_RS05040 a7deb3d4a5ffea5148fd271f9fb7816c 335 PIRSF PIRSF000267 2 335 7.2E-88 T 09-03-2017 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 BV404_RS01140 01b2a5083198bb4ef8613ce615f64b52 166 Pfam PF11736 Protein of unknown function (DUF3299) 29 163 4.5E-45 T 09-03-2017 IPR021727 Protein of unknown function DUF3299 BV404_RS09750 1b669d3055fd5fae70b6926699788c39 427 PIRSF PIRSF006066 1 425 2.9E-141 T 09-03-2017 IPR004681 TRAP transporter permease protein GO:0016021 BV404_RS09750 1b669d3055fd5fae70b6926699788c39 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 414 9.4E-121 T 09-03-2017 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit BV404_RS09750 1b669d3055fd5fae70b6926699788c39 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 15 419 8.2E-142 T 09-03-2017 IPR004681 TRAP transporter permease protein GO:0016021 BV404_RS00530 51fbb00816bab11c03c1d02066e24af7 388 SUPERFAMILY SSF53383 11 383 1.99E-116 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase BV404_RS00530 51fbb00816bab11c03c1d02066e24af7 388 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 381 2.6E-135 T 09-03-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BV404_RS00530 51fbb00816bab11c03c1d02066e24af7 388 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 191 205 - T 09-03-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BV404_RS00530 51fbb00816bab11c03c1d02066e24af7 388 Gene3D G3DSA:3.90.1150.10 250 385 5.0E-49 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 BV404_RS00530 51fbb00816bab11c03c1d02066e24af7 388 Gene3D G3DSA:3.40.640.10 5 247 1.2E-84 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 BV404_RS00530 51fbb00816bab11c03c1d02066e24af7 388 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 4 383 2.8E-203 T 09-03-2017 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48 BV404_RS00530 51fbb00816bab11c03c1d02066e24af7 388 PIRSF PIRSF001434 1 385 2.0E-130 T 09-03-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BV404_RS09535 ac3aa9cb1bac9c627da7f120a1176526 199 SMART SM00493 81 166 2.4E-17 T 09-03-2017 IPR006171 Toprim domain BV404_RS09535 ac3aa9cb1bac9c627da7f120a1176526 199 SUPERFAMILY SSF111304 2 199 2.09E-71 T 09-03-2017 IPR023627 Recombination protein RecR BV404_RS09535 ac3aa9cb1bac9c627da7f120a1176526 199 Pfam PF13662 Toprim domain 82 172 7.5E-23 T 09-03-2017 IPR006171 Toprim domain BV404_RS09535 ac3aa9cb1bac9c627da7f120a1176526 199 TIGRFAM TIGR00615 recR: recombination protein RecR 3 197 6.4E-77 T 09-03-2017 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 BV404_RS09535 ac3aa9cb1bac9c627da7f120a1176526 199 Pfam PF02132 RecR protein 40 77 1.8E-15 T 09-03-2017 IPR023628 Recombination protein RecR, C4-type zinc finger BV404_RS09535 ac3aa9cb1bac9c627da7f120a1176526 199 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 102.507 T 09-03-2017 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 BV404_RS09535 ac3aa9cb1bac9c627da7f120a1176526 199 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 09-03-2017 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 BV404_RS11835 137881bd7997c157f20cfafd2872a2c6 201 SUPERFAMILY SSF53955 11 166 5.94E-24 T 09-03-2017 IPR023346 Lysozyme-like domain BV404_RS11835 137881bd7997c157f20cfafd2872a2c6 201 Gene3D G3DSA:1.10.530.10 47 163 2.2E-7 T 09-03-2017 BV404_RS06570 dc8fc08fe73839454d82d6b5473a485d 417 Pfam PF03222 Tryptophan/tyrosine permease family 28 413 9.1E-16 T 09-03-2017 IPR018227 Tryptophan/tyrosine permease GO:0003333 BV404_RS01335 2c34f6deee91e9570602ef875023fc21 246 Pfam PF01553 Acyltransferase 60 180 1.9E-31 T 09-03-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 BV404_RS01335 2c34f6deee91e9570602ef875023fc21 246 SMART SM00563 67 182 4.6E-42 T 09-03-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 BV404_RS01335 2c34f6deee91e9570602ef875023fc21 246 SUPERFAMILY SSF69593 7 236 1.83E-55 T 09-03-2017 BV404_RS01335 2c34f6deee91e9570602ef875023fc21 246 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 6.2E-43 T 09-03-2017 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 BV404_RS01335 2c34f6deee91e9570602ef875023fc21 246 Gene3D G3DSA:3.40.1130.10 46 235 1.6E-17 T 09-03-2017 BV404_RS07665 f05a3f55a5f26d187f8ca4e70ddb6c0e 171 Pfam PF07291 Methylamine utilisation protein MauE 2 138 4.0E-11 T 09-03-2017 IPR009908 Methylamine utilisation protein, MauE GO:0016021|GO:0030416 BV404_RS01460 c21f859a226c1c10d4c9f0a287671df6 143 Pfam PF10980 Protein of unknown function (DUF2787) 19 141 9.1E-39 T 09-03-2017 IPR021248 Protein of unknown function DUF2787 BV404_RS04850 bd9f079a61c2da92e1044f01935eeaea 50 TIGRFAM TIGR03510 XapX: XapX domain 2 49 5.7E-15 T 09-03-2017 IPR020017 XapX domain BV404_RS04850 bd9f079a61c2da92e1044f01935eeaea 50 Pfam PF07235 Protein of unknown function (DUF1427) 2 45 6.9E-6 T 09-03-2017 IPR009872 Protein of unknown function DUF1427 BV404_RS13940 36ad503edb36b6a75d2b49da556bc67a 185 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 5 185 2.9E-37 T 09-03-2017 IPR006070 YrdC-like domain GO:0003725 BV404_RS13940 36ad503edb36b6a75d2b49da556bc67a 185 SUPERFAMILY SSF55821 3 178 4.27E-56 T 09-03-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain BV404_RS13940 36ad503edb36b6a75d2b49da556bc67a 185 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 1 183 41.06 T 09-03-2017 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 BV404_RS13940 36ad503edb36b6a75d2b49da556bc67a 185 Gene3D G3DSA:3.90.870.10 3 185 1.8E-58 T 09-03-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain BV404_RS13940 36ad503edb36b6a75d2b49da556bc67a 185 Pfam PF01300 Telomere recombination 9 185 1.6E-49 T 09-03-2017 IPR006070 YrdC-like domain GO:0003725 BV404_RS01900 9e43e218e8947504d2188cdbff6361f1 246 SUPERFAMILY SSF160950 1 245 1.31E-91 T 09-03-2017 BV404_RS01900 9e43e218e8947504d2188cdbff6361f1 246 Hamap MF_01092 Cell division protein ZapD [zapD]. 3 245 32.53 T 09-03-2017 IPR009777 Cell division protein ZapD BV404_RS01900 9e43e218e8947504d2188cdbff6361f1 246 Gene3D G3DSA:2.60.440.10 173 245 8.3E-32 T 09-03-2017 IPR027462 Z ring-associated protein D, C-terminal domain BV404_RS01900 9e43e218e8947504d2188cdbff6361f1 246 Pfam PF07072 Protein of unknown function (DUF1342) 18 224 6.9E-75 T 09-03-2017 IPR009777 Cell division protein ZapD BV404_RS01900 9e43e218e8947504d2188cdbff6361f1 246 Gene3D G3DSA:1.10.3900.10 12 172 3.1E-62 T 09-03-2017 BV404_RS14140 dbe9aaf770c81b6c77abcf79a185e075 248 Gene3D G3DSA:3.40.190.10 101 200 4.7E-28 T 09-03-2017 BV404_RS14140 dbe9aaf770c81b6c77abcf79a185e075 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 25 243 5.0E-57 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BV404_RS14140 dbe9aaf770c81b6c77abcf79a185e075 248 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 46 59 - T 09-03-2017 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 BV404_RS14140 dbe9aaf770c81b6c77abcf79a185e075 248 SUPERFAMILY SSF53850 1 246 2.29E-58 T 09-03-2017 BV404_RS14140 dbe9aaf770c81b6c77abcf79a185e075 248 SMART SM00062 24 245 1.2E-72 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BV404_RS14140 dbe9aaf770c81b6c77abcf79a185e075 248 Gene3D G3DSA:3.40.190.10 204 247 3.7E-35 T 09-03-2017 BV404_RS14140 dbe9aaf770c81b6c77abcf79a185e075 248 Gene3D G3DSA:3.40.190.10 23 100 3.7E-35 T 09-03-2017 BV404_RS13410 111fee3eb25d3083a28951219ed76918 281 Pfam PF01040 UbiA prenyltransferase family 25 252 1.9E-26 T 09-03-2017 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 BV404_RS01420 e6f4194c690ed942d477fdf37b31776e 157 Pfam PF06271 RDD family 8 147 9.1E-22 T 09-03-2017 IPR010432 RDD BV404_RS19580 63309d2ce2ba01144f4fa3a02fe9ec35 361 SUPERFAMILY SSF82866 2 50 6.28E-6 T 09-03-2017 BV404_RS19580 63309d2ce2ba01144f4fa3a02fe9ec35 361 Gene3D G3DSA:3.30.2090.10 268 351 4.1E-20 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BV404_RS19580 63309d2ce2ba01144f4fa3a02fe9ec35 361 Gene3D G3DSA:1.10.3850.10 1 51 2.6E-12 T 09-03-2017 BV404_RS19580 63309d2ce2ba01144f4fa3a02fe9ec35 361 SUPERFAMILY SSF82714 267 351 1.02E-18 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BV404_RS19580 63309d2ce2ba01144f4fa3a02fe9ec35 361 Pfam PF00873 AcrB/AcrD/AcrF family 3 361 6.2E-65 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 BV404_RS06200 b3300cdccb9abd4b3763a63e0227f54f 316 Pfam PF01882 Protein of unknown function DUF58 53 138 1.6E-20 T 09-03-2017 IPR002881 Domain of unknown function DUF58 BV404_RS07950 b5edc16455671f49887f5b2a46bcadbf 251 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 1 251 44.191 T 09-03-2017 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 BV404_RS07950 b5edc16455671f49887f5b2a46bcadbf 251 Gene3D G3DSA:3.40.50.300 16 234 8.8E-46 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS07950 b5edc16455671f49887f5b2a46bcadbf 251 SUPERFAMILY SSF52540 16 228 1.6E-43 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS07950 b5edc16455671f49887f5b2a46bcadbf 251 Pfam PF00005 ABC transporter 15 164 3.2E-20 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BV404_RS07950 b5edc16455671f49887f5b2a46bcadbf 251 SMART SM00382 22 213 2.2E-12 T 09-03-2017 IPR003593 AAA+ ATPase domain BV404_RS05930 740c00af77f0050eb6ab1c0740798004 399 Pfam PF11449 Putative, 10TM heavy-metal exporter 40 397 7.0E-155 T 09-03-2017 IPR021552 Putative, 10TM heavy-metal exporter BV404_RS08380 eec1b4b1b8f912c839b120b173a958ff 275 Pfam PF10977 Protein of unknown function (DUF2797) 38 270 1.4E-95 T 09-03-2017 IPR021246 Protein of unknown function DUF2797 BV404_RS02820 e840e259bbc09a894ccd310558408588 129 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 2 129 30.842 T 09-03-2017 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 BV404_RS02820 e840e259bbc09a894ccd310558408588 129 Pfam PF07417 Transcriptional regulator Crl 6 123 3.6E-49 T 09-03-2017 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 BV404_RS10060 87178b7f640fa838cb99a5e8f3378c24 383 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 3.6E-19 T 09-03-2017 BV404_RS10060 87178b7f640fa838cb99a5e8f3378c24 383 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 292 308 3.6E-19 T 09-03-2017 BV404_RS10060 87178b7f640fa838cb99a5e8f3378c24 383 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 3.6E-19 T 09-03-2017 BV404_RS10060 87178b7f640fa838cb99a5e8f3378c24 383 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 277 292 3.6E-19 T 09-03-2017 BV404_RS10060 87178b7f640fa838cb99a5e8f3378c24 383 SUPERFAMILY SSF51905 264 376 7.13E-59 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS10060 87178b7f640fa838cb99a5e8f3378c24 383 SUPERFAMILY SSF51905 3 175 7.13E-59 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS10060 87178b7f640fa838cb99a5e8f3378c24 383 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 382 1.7E-114 T 09-03-2017 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 BV404_RS10060 87178b7f640fa838cb99a5e8f3378c24 383 Pfam PF01494 FAD binding domain 4 307 4.7E-26 T 09-03-2017 IPR002938 FAD-binding domain GO:0071949 BV404_RS10060 87178b7f640fa838cb99a5e8f3378c24 383 Gene3D G3DSA:3.50.50.60 265 348 4.3E-44 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS10060 87178b7f640fa838cb99a5e8f3378c24 383 Gene3D G3DSA:3.50.50.60 3 180 4.3E-44 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BV404_RS01105 3a59411b3feb0a5bb93e49998b55bfab 653 Pfam PF02872 5'-nucleotidase, C-terminal domain 362 554 2.5E-22 T 09-03-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 BV404_RS01105 3a59411b3feb0a5bb93e49998b55bfab 653 Gene3D G3DSA:3.60.21.10 19 365 9.5E-96 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like BV404_RS01105 3a59411b3feb0a5bb93e49998b55bfab 653 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 29 653 0.0 T 09-03-2017 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 BV404_RS01105 3a59411b3feb0a5bb93e49998b55bfab 653 PRINTS PR01607 Apyrase family signature 221 238 1.7E-28 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 BV404_RS01105 3a59411b3feb0a5bb93e49998b55bfab 653 PRINTS PR01607 Apyrase family signature 289 309 1.7E-28 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 BV404_RS01105 3a59411b3feb0a5bb93e49998b55bfab 653 PRINTS PR01607 Apyrase family signature 28 46 1.7E-28 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 BV404_RS01105 3a59411b3feb0a5bb93e49998b55bfab 653 PRINTS PR01607 Apyrase family signature 249 272 1.7E-28 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 BV404_RS01105 3a59411b3feb0a5bb93e49998b55bfab 653 PRINTS PR01607 Apyrase family signature 434 457 1.7E-28 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 BV404_RS01105 3a59411b3feb0a5bb93e49998b55bfab 653 PRINTS PR01607 Apyrase family signature 536 555 1.7E-28 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 BV404_RS01105 3a59411b3feb0a5bb93e49998b55bfab 653 SUPERFAMILY SSF56300 23 360 6.12E-88 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like BV404_RS01105 3a59411b3feb0a5bb93e49998b55bfab 653 Gene3D G3DSA:3.90.780.10 366 602 7.8E-41 T 09-03-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 BV404_RS01105 3a59411b3feb0a5bb93e49998b55bfab 653 Pfam PF00149 Calcineurin-like phosphoesterase 30 265 8.6E-10 T 09-03-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 BV404_RS01105 3a59411b3feb0a5bb93e49998b55bfab 653 SUPERFAMILY SSF55816 361 603 1.44E-37 T 09-03-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 BV404_RS01105 3a59411b3feb0a5bb93e49998b55bfab 653 ProSitePatterns PS00786 5'-nucleotidase signature 2. 115 126 - T 09-03-2017 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-73621|Reactome: R-HSA-74259 BV404_RS10705 56bd73f558fc7bb38735bf1924f45e35 519 Pfam PF03806 AbgT putative transporter family 20 517 2.7E-210 T 09-03-2017 IPR004697 p-aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 BV404_RS11820 5934129c4a3cef23500eb2665b195f65 264 Pfam PF01578 Cytochrome C assembly protein 37 262 1.1E-47 T 09-03-2017 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 BV404_RS08010 a1665ee0e40ca012639e4feef311b10f 124 Pfam PF03788 LrgA family 20 110 3.0E-24 T 09-03-2017 IPR005538 LrgA/CidA family GO:0016021 BV404_RS08010 a1665ee0e40ca012639e4feef311b10f 124 Hamap MF_01144 UPF0299 membrane protein YohJ [yohJ]. 1 120 20.921 T 09-03-2017 IPR022957 Uncharacterised protein family UPF0299 BV404_RS04900 c0db98dc4e7b48f13a90ed63c771f15a 200 Pfam PF13649 Methyltransferase domain 39 129 4.1E-11 T 09-03-2017 BV404_RS04900 c0db98dc4e7b48f13a90ed63c771f15a 200 SUPERFAMILY SSF53335 3 181 6.46E-23 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS04900 c0db98dc4e7b48f13a90ed63c771f15a 200 Gene3D G3DSA:3.40.50.150 19 196 8.5E-21 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BV404_RS12195 4fc99bbaece9aabbb1cbd4b47993b632 208 Pfam PF01810 LysE type translocator 15 200 1.5E-41 T 09-03-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 BV404_RS08755 264f77f1de5c31b11d601a889a7b36c3 189 Pfam PF03695 Uncharacterised protein family (UPF0149) 3 178 3.5E-33 T 09-03-2017 IPR011978 Uncharacterised protein family UPF0149 BV404_RS08755 264f77f1de5c31b11d601a889a7b36c3 189 SUPERFAMILY SSF101327 2 176 3.92E-30 T 09-03-2017 IPR011978 Uncharacterised protein family UPF0149 BV404_RS08755 264f77f1de5c31b11d601a889a7b36c3 189 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 3 174 1.2E-39 T 09-03-2017 IPR011978 Uncharacterised protein family UPF0149 BV404_RS01175 70b72549c9295cd027efcadce0c50d87 571 Pfam PF01103 Surface antigen 276 568 8.6E-30 T 09-03-2017 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020 BV404_RS01175 70b72549c9295cd027efcadce0c50d87 571 Gene3D G3DSA:2.40.160.50 277 568 2.9E-21 T 09-03-2017 BV404_RS13380 cd48556a7d944f067f45d39ea6952e9a 181 Pfam PF02397 Bacterial sugar transferase 3 172 1.4E-47 T 09-03-2017 IPR003362 Bacterial sugar transferase BV404_RS03470 d7ab211ce5e1e5b25f05908f236ab67e 229 SUPERFAMILY SSF55166 22 176 1.73E-18 T 09-03-2017 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 BV404_RS03470 d7ab211ce5e1e5b25f05908f236ab67e 229 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 26 177 3.4E-33 T 09-03-2017 IPR003709 Peptidase M15B GO:0006508|GO:0008233 BV404_RS09770 af9cd7a3c4d1179ffdd3735fe8671ff1 287 ProSitePatterns PS01125 ROK family signature. 128 155 - T 09-03-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BV404_RS09770 af9cd7a3c4d1179ffdd3735fe8671ff1 287 Pfam PF00480 ROK family 4 285 8.9E-59 T 09-03-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BV404_RS09770 af9cd7a3c4d1179ffdd3735fe8671ff1 287 SUPERFAMILY SSF53067 1 285 8.88E-48 T 09-03-2017 BV404_RS09770 af9cd7a3c4d1179ffdd3735fe8671ff1 287 Gene3D G3DSA:3.30.420.40 2 134 3.2E-28 T 09-03-2017 BV404_RS09770 af9cd7a3c4d1179ffdd3735fe8671ff1 287 Gene3D G3DSA:3.30.420.40 135 259 2.4E-43 T 09-03-2017 BV404_RS05375 363162d6e03d4dc1b4292edfdcb42c83 240 Gene3D G3DSA:3.40.47.10 12 165 5.9E-4 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 BV404_RS05375 363162d6e03d4dc1b4292edfdcb42c83 240 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 28 238 4.7E-72 T 09-03-2017 IPR014030 Beta-ketoacyl synthase, N-terminal BV404_RS03580 56bdb92c5a34f8d263b6aab9670fac1d 580 PRINTS PR01009 Flagellar M-ring protein signature 295 313 8.4E-23 T 09-03-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BV404_RS03580 56bdb92c5a34f8d263b6aab9670fac1d 580 PRINTS PR01009 Flagellar M-ring protein signature 375 399 8.4E-23 T 09-03-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BV404_RS03580 56bdb92c5a34f8d263b6aab9670fac1d 580 PRINTS PR01009 Flagellar M-ring protein signature 150 168 8.4E-23 T 09-03-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BV404_RS03580 56bdb92c5a34f8d263b6aab9670fac1d 580 PRINTS PR01009 Flagellar M-ring protein signature 182 196 8.4E-23 T 09-03-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BV404_RS03580 56bdb92c5a34f8d263b6aab9670fac1d 580 PRINTS PR01009 Flagellar M-ring protein signature 225 243 8.4E-23 T 09-03-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BV404_RS03580 56bdb92c5a34f8d263b6aab9670fac1d 580 PIRSF PIRSF004862 29 580 9.9E-161 T 09-03-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BV404_RS03580 56bdb92c5a34f8d263b6aab9670fac1d 580 Pfam PF08345 Flagellar M-ring protein C-terminal 282 452 2.8E-40 T 09-03-2017 IPR013556 Flagellar M-ring C-terminal BV404_RS03580 56bdb92c5a34f8d263b6aab9670fac1d 580 Pfam PF01514 Secretory protein of YscJ/FliF family 63 249 2.6E-55 T 09-03-2017 IPR006182 Secretory protein YscJ/FliF BV404_RS03580 56bdb92c5a34f8d263b6aab9670fac1d 580 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 53 579 1.1E-76 T 09-03-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BV404_RS06345 12dc83db360029ae800c8bb089ee33f1 338 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 38 316 6.7E-46 T 09-03-2017 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 BV404_RS01815 8fbc8414680165ffc255f0cd61179a8f 274 Pfam PF16537 Type II secretion system protein B 209 268 2.5E-24 T 09-03-2017 IPR032389 Type II secretion system protein B BV404_RS14635 0c4060fc3f25e4f588cd4e5c94046ba2 405 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 66 394 2.5E-109 T 09-03-2017 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX BV404_RS03985 0a609d2ead452e7b84b35d1a2fbe1fd3 160 Pfam PF03918 Cytochrome C biogenesis protein 10 151 2.8E-56 T 09-03-2017 IPR005616 CcmH/CycL/Ccl2/NrfF family BV404_RS06595 94b7ec98cba23c60c77767e328d06e0c 505 Pfam PF05683 Fumarase C-terminus 289 490 2.9E-83 T 09-03-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 BV404_RS06595 94b7ec98cba23c60c77767e328d06e0c 505 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 3.4E-98 T 09-03-2017 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 BV404_RS06595 94b7ec98cba23c60c77767e328d06e0c 505 Gene3D G3DSA:3.20.130.10 303 490 1.7E-73 T 09-03-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 BV404_RS06595 94b7ec98cba23c60c77767e328d06e0c 505 SUPERFAMILY SSF117457 317 489 5.75E-63 T 09-03-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 BV404_RS06595 94b7ec98cba23c60c77767e328d06e0c 505 PIRSF PIRSF001394 1 505 1.0E-216 T 09-03-2017 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 BV404_RS06595 94b7ec98cba23c60c77767e328d06e0c 505 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 326 487 1.4E-49 T 09-03-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 BV404_RS06595 94b7ec98cba23c60c77767e328d06e0c 505 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 284 5.7E-63 T 09-03-2017 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 BV404_RS05330 23f4703fd57012875550ca10599a63ce 148 Pfam PF13279 Thioesterase-like superfamily 18 123 9.5E-14 T 09-03-2017 BV404_RS05330 23f4703fd57012875550ca10599a63ce 148 SUPERFAMILY SSF54637 9 143 9.66E-32 T 09-03-2017 IPR029069 HotDog domain BV404_RS05330 23f4703fd57012875550ca10599a63ce 148 Gene3D G3DSA:3.10.129.10 12 134 6.1E-36 T 09-03-2017 IPR029069 HotDog domain BV404_RS01765 bf49288bc577f6de5422b426f7afa038 243 Gene3D G3DSA:3.20.20.70 3 242 7.0E-112 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS01765 bf49288bc577f6de5422b426f7afa038 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 238 1.1E-98 T 09-03-2017 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 BV404_RS01765 bf49288bc577f6de5422b426f7afa038 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 2.1E-104 T 09-03-2017 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 BV404_RS01765 bf49288bc577f6de5422b426f7afa038 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 132.006 T 09-03-2017 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 BV404_RS01765 bf49288bc577f6de5422b426f7afa038 243 SUPERFAMILY SSF63892 4 242 1.7E-101 T 09-03-2017 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 BV404_RS09520 ad75ad5420afe1e762ec3e06cdf9d89a 146 Pfam PF03692 Putative zinc- or iron-chelating domain 23 91 2.7E-8 T 09-03-2017 IPR005358 Putative zinc- or iron-chelating domain containing protein BV404_RS09520 ad75ad5420afe1e762ec3e06cdf9d89a 146 PIRSF PIRSF006173 1 144 1.6E-65 T 09-03-2017 IPR008228 Uncharacterised conserved protein UCP006173 BV404_RS09520 ad75ad5420afe1e762ec3e06cdf9d89a 146 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 1 144 42.17 T 09-03-2017 IPR008228 Uncharacterised conserved protein UCP006173 BV404_RS04190 5db8fa67f5cc580f67abc0e51a7fbd93 211 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 5 203 2.4E-66 T 09-03-2017 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 BV404_RS04190 5db8fa67f5cc580f67abc0e51a7fbd93 211 Pfam PF01914 MarC family integral membrane protein 6 207 2.9E-64 T 09-03-2017 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 BV404_RS04645 7469f3988e43153a7ffabb20f78c044e 445 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 216 439 1.3E-48 T 09-03-2017 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 BV404_RS04645 7469f3988e43153a7ffabb20f78c044e 445 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 2 100 3.8E-17 T 09-03-2017 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 BV404_RS13385 3db048dedcf19af80ead587e65cd6ccd 316 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 223 3.0E-35 T 09-03-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 BV404_RS13385 3db048dedcf19af80ead587e65cd6ccd 316 Gene3D G3DSA:3.40.50.720 1 306 8.9E-57 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS13385 3db048dedcf19af80ead587e65cd6ccd 316 SUPERFAMILY SSF51735 1 311 1.41E-66 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS05870 2b5748fcf043eeac5ff8fff6fafe5a31 210 Gene3D G3DSA:3.40.50.620 16 151 1.3E-48 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS05870 2b5748fcf043eeac5ff8fff6fafe5a31 210 Pfam PF02698 DUF218 domain 26 146 3.9E-22 T 09-03-2017 IPR003848 Domain of unknown function DUF218 BV404_RS06715 6768246e13850158785ac67b87ca8617 323 SUPERFAMILY SSF53850 36 267 2.17E-9 T 09-03-2017 BV404_RS06715 6768246e13850158785ac67b87ca8617 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 62 320 3.6E-26 T 09-03-2017 IPR005064 Bordetella uptake gene GO:0030288 BV404_RS06715 6768246e13850158785ac67b87ca8617 323 Gene3D G3DSA:3.40.190.10 123 238 1.3E-4 T 09-03-2017 BV404_RS06715 6768246e13850158785ac67b87ca8617 323 PIRSF PIRSF017082 3 323 2.8E-84 T 09-03-2017 IPR005064 Bordetella uptake gene GO:0030288 BV404_RS09505 aa431c91be0cff1c556d0ca5e3a0a1a3 310 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 44 245 6.7E-56 T 09-03-2017 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN BV404_RS09505 aa431c91be0cff1c556d0ca5e3a0a1a3 310 PIRSF PIRSF020419 1 289 2.4E-74 T 09-03-2017 IPR016773 Ferric uptake regulator, CjrA, predicted BV404_RS09505 aa431c91be0cff1c556d0ca5e3a0a1a3 310 SUPERFAMILY SSF159501 22 272 1.94E-68 T 09-03-2017 BV404_RS04810 31a4004d4270610110ef72bed7c0526e 412 Pfam PF01554 MatE 14 158 1.8E-6 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BV404_RS10430 f4aba0407edd49c6846a2a4d73716024 417 SUPERFAMILY SSF55205 4 415 3.76E-101 T 09-03-2017 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 BV404_RS10430 f4aba0407edd49c6846a2a4d73716024 417 Gene3D G3DSA:3.65.10.10 222 415 2.3E-41 T 09-03-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 BV404_RS10430 f4aba0407edd49c6846a2a4d73716024 417 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 9 406 1.3E-59 T 09-03-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 BV404_RS10430 f4aba0407edd49c6846a2a4d73716024 417 Gene3D G3DSA:3.65.10.10 22 221 4.0E-42 T 09-03-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 BV404_RS01305 d5d6dc8ef4528d27a1524978bc44745d 263 Pfam PF02405 Permease MlaE 48 259 1.6E-74 T 09-03-2017 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 BV404_RS01305 d5d6dc8ef4528d27a1524978bc44745d 263 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 13 261 1.7E-97 T 09-03-2017 IPR003453 ABC transport permease subunit MlaE, Proteobacteria BV404_RS00390 2d3a9b407eed99adf9a4127961a0dccd 88 Pfam PF13937 Domain of unknown function (DUF4212) 9 86 7.5E-34 T 09-03-2017 IPR019886 Sodium symporter small subunit, predicted BV404_RS00390 2d3a9b407eed99adf9a4127961a0dccd 88 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 11 87 4.2E-35 T 09-03-2017 IPR019886 Sodium symporter small subunit, predicted BV404_RS05575 4a436ecbec82ff8e50a5ee15fa0edaed 287 Hamap MF_00188 Protease HtpX [htpX]. 1 287 25.283 T 09-03-2017 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 BV404_RS05575 4a436ecbec82ff8e50a5ee15fa0edaed 287 Pfam PF01435 Peptidase family M48 79 286 7.6E-41 T 09-03-2017 IPR001915 Peptidase M48 GO:0004222|GO:0006508 BV404_RS05575 4a436ecbec82ff8e50a5ee15fa0edaed 287 Gene3D G3DSA:3.30.2010.10 73 160 1.7E-32 T 09-03-2017 BV404_RS05525 a3e6188258e53b6fe5c8855c49cf62f3 454 SUPERFAMILY SSF53850 34 126 9.77E-22 T 09-03-2017 BV404_RS05525 a3e6188258e53b6fe5c8855c49cf62f3 454 SUPERFAMILY SSF53850 159 335 9.77E-22 T 09-03-2017 BV404_RS05525 a3e6188258e53b6fe5c8855c49cf62f3 454 Pfam PF13379 NMT1-like family 28 308 5.0E-108 T 09-03-2017 BV404_RS11460 7e37f5a34b3e3d2883ad07647a857532 225 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 214 2.6E-89 T 09-03-2017 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BV404_RS11460 7e37f5a34b3e3d2883ad07647a857532 225 SMART SM00987 49 210 1.4E-40 T 09-03-2017 BV404_RS11460 7e37f5a34b3e3d2883ad07647a857532 225 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 40.76 T 09-03-2017 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BV404_RS11460 7e37f5a34b3e3d2883ad07647a857532 225 Gene3D G3DSA:3.40.470.10 6 221 7.6E-104 T 09-03-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BV404_RS11460 7e37f5a34b3e3d2883ad07647a857532 225 Pfam PF03167 Uracil DNA glycosylase superfamily 54 209 1.2E-25 T 09-03-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BV404_RS11460 7e37f5a34b3e3d2883ad07647a857532 225 SUPERFAMILY SSF52141 5 221 3.05E-97 T 09-03-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BV404_RS11460 7e37f5a34b3e3d2883ad07647a857532 225 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 09-03-2017 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BV404_RS11460 7e37f5a34b3e3d2883ad07647a857532 225 SMART SM00986 49 210 1.4E-40 T 09-03-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BV404_RS08800 2f745450a3d2ab348283fd5f9bb383ca 101 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 20 97 6.9E-31 T 09-03-2017 IPR011846 Cyd operon protein YbgE BV404_RS08800 2f745450a3d2ab348283fd5f9bb383ca 101 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 8 99 5.1E-38 T 09-03-2017 IPR011846 Cyd operon protein YbgE BV404_RS08625 9d1e31aa638742bc2d1d085f900619e6 190 Pfam PF03358 NADPH-dependent FMN reductase 5 148 8.4E-33 T 09-03-2017 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 BV404_RS08625 9d1e31aa638742bc2d1d085f900619e6 190 SUPERFAMILY SSF52218 5 175 1.86E-44 T 09-03-2017 IPR029039 Flavoprotein-like domain BV404_RS08625 9d1e31aa638742bc2d1d085f900619e6 190 Gene3D G3DSA:3.40.50.360 1 181 1.7E-44 T 09-03-2017 IPR029039 Flavoprotein-like domain BV404_RS10070 d898887ebff3803a91b5353e8a57ffd6 369 Pfam PF02562 PhoH-like protein 120 323 1.4E-94 T 09-03-2017 IPR003714 PhoH-like protein GO:0005524 BV404_RS10070 d898887ebff3803a91b5353e8a57ffd6 369 SUPERFAMILY SSF52540 119 320 4.51E-40 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS10070 d898887ebff3803a91b5353e8a57ffd6 369 Gene3D G3DSA:3.40.50.300 120 323 1.4E-87 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS07915 b9c788af3e565ff0e477df485a3712a0 116 Pfam PF11042 Protein of unknown function (DUF2750) 13 113 2.5E-32 T 09-03-2017 IPR021284 Protein of unknown function DUF2750 BV404_RS08915 e8afa8c4759484b8de5096adac28253b 514 Pfam PF11840 Protein of unknown function (DUF3360) 9 513 4.7E-266 T 09-03-2017 IPR021794 Protein of unknown function DUF3360 BV404_RS19490 d803c28bb2cf461a518616b8e297b1eb 181 Pfam PF05114 Protein of unknown function (DUF692) 16 129 1.1E-19 T 09-03-2017 IPR007801 Uncharacterised protein family UPF0276 BV404_RS19490 d803c28bb2cf461a518616b8e297b1eb 181 Gene3D G3DSA:3.20.20.150 12 165 1.0E-21 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain BV404_RS13920 945e65825f141d56765830f530de0565 182 Gene3D G3DSA:2.160.10.10 4 175 7.4E-43 T 09-03-2017 BV404_RS13920 945e65825f141d56765830f530de0565 182 SUPERFAMILY SSF51161 4 174 1.94E-43 T 09-03-2017 IPR011004 Trimeric LpxA-like BV404_RS13920 945e65825f141d56765830f530de0565 182 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 40 4.1E-4 T 09-03-2017 IPR001451 Hexapeptide repeat BV404_RS13920 945e65825f141d56765830f530de0565 182 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 96 129 1.3E-6 T 09-03-2017 IPR001451 Hexapeptide repeat BV404_RS04785 e21306f008aaefbea62a77bc7d929012 159 Pfam PF07308 Protein of unknown function (DUF1456) 3 70 5.9E-21 T 09-03-2017 IPR009921 Domain of unknown function DUF1456 BV404_RS04785 e21306f008aaefbea62a77bc7d929012 159 Pfam PF07308 Protein of unknown function (DUF1456) 85 151 1.8E-21 T 09-03-2017 IPR009921 Domain of unknown function DUF1456 BV404_RS01510 d9af575ba86806fab70c062fd351f787 958 Pfam PF03175 DNA polymerase type B, organellar and viral 410 578 2.1E-6 T 09-03-2017 IPR004868 DNA-directed DNA polymerase, family B, mitochondria/virus GO:0000166|GO:0003677|GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS01510 d9af575ba86806fab70c062fd351f787 958 SUPERFAMILY SSF56672 407 654 5.56E-16 T 09-03-2017 BV404_RS09090 24a18d1af6ead104beaf2949258641f2 173 Gene3D G3DSA:1.20.1550.10 6 172 1.7E-61 T 09-03-2017 IPR023380 Disulphide bond formation protein DsbB-like domain BV404_RS09090 24a18d1af6ead104beaf2949258641f2 173 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 9 170 21.607 T 09-03-2017 IPR022920 Disulphide bond formation protein DsbB BV404_RS09090 24a18d1af6ead104beaf2949258641f2 173 Pfam PF02600 Disulfide bond formation protein DsbB 14 162 7.3E-42 T 09-03-2017 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 BV404_RS09090 24a18d1af6ead104beaf2949258641f2 173 SUPERFAMILY SSF158442 17 163 2.22E-41 T 09-03-2017 BV404_RS01400 951912c68a54c348a35f9cce0ff57d36 149 SUPERFAMILY SSF102400 1 145 5.1E-40 T 09-03-2017 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 BV404_RS01400 951912c68a54c348a35f9cce0ff57d36 149 Gene3D G3DSA:3.40.50.10110 1 146 2.6E-43 T 09-03-2017 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 BV404_RS01400 951912c68a54c348a35f9cce0ff57d36 149 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 142 5.0E-32 T 09-03-2017 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 BV404_RS06945 f5891f66189ea4202244ea5a4d1344a9 113 Pfam PF12290 Protein of unknown function (DUF3802) 2 109 6.2E-42 T 09-03-2017 IPR020979 Uncharacterised protein family A0KLC6 BV404_RS10955 2a1bd24e4318a5a8f3541e33bd9ef0c6 127 Pfam PF01592 NifU-like N terminal domain 2 125 8.5E-57 T 09-03-2017 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 BV404_RS10955 2a1bd24e4318a5a8f3541e33bd9ef0c6 127 SUPERFAMILY SSF82649 1 125 3.92E-48 T 09-03-2017 BV404_RS10955 2a1bd24e4318a5a8f3541e33bd9ef0c6 127 Gene3D G3DSA:3.90.1010.10 2 126 2.8E-56 T 09-03-2017 BV404_RS10955 2a1bd24e4318a5a8f3541e33bd9ef0c6 127 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 2.4E-69 T 09-03-2017 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 BV404_RS03180 e2c2bc2269e3840217f2a598f673ca85 131 PIRSF PIRSF002889 1 131 9.3E-34 T 09-03-2017 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 BV404_RS03180 e2c2bc2269e3840217f2a598f673ca85 131 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 129 1.0E-28 T 09-03-2017 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 BV404_RS01915 812f91834ab9b91a93f5b50b1afcd6c3 408 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 168 196 - T 09-03-2017 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 BV404_RS01915 812f91834ab9b91a93f5b50b1afcd6c3 408 Pfam PF00482 Type II secretion system (T2SS), protein F 277 399 1.7E-27 T 09-03-2017 IPR018076 Type II secretion system F domain BV404_RS01915 812f91834ab9b91a93f5b50b1afcd6c3 408 Pfam PF00482 Type II secretion system (T2SS), protein F 74 196 2.0E-32 T 09-03-2017 IPR018076 Type II secretion system F domain BV404_RS01915 812f91834ab9b91a93f5b50b1afcd6c3 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 372 386 8.1E-20 T 09-03-2017 IPR003004 GspF/PilC family BV404_RS01915 812f91834ab9b91a93f5b50b1afcd6c3 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 388 407 8.1E-20 T 09-03-2017 IPR003004 GspF/PilC family BV404_RS01915 812f91834ab9b91a93f5b50b1afcd6c3 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 69 81 8.1E-20 T 09-03-2017 IPR003004 GspF/PilC family BV404_RS01915 812f91834ab9b91a93f5b50b1afcd6c3 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 168 196 8.1E-20 T 09-03-2017 IPR003004 GspF/PilC family BV404_RS04595 5d53410b8aa8b320acf4b2d793c0f7ac 277 Pfam PF13460 NAD(P)H-binding 8 174 2.9E-14 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS04595 5d53410b8aa8b320acf4b2d793c0f7ac 277 Gene3D G3DSA:3.40.50.720 1 208 9.7E-37 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS04595 5d53410b8aa8b320acf4b2d793c0f7ac 277 SUPERFAMILY SSF51735 3 268 1.32E-48 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS01465 ffb0d8412a7e4b2bb8b90124409f069a 293 Gene3D G3DSA:1.10.10.10 4 51 6.7E-5 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS01465 ffb0d8412a7e4b2bb8b90124409f069a 293 Pfam PF13280 WYL domain 123 287 1.5E-16 T 09-03-2017 IPR026881 WYL domain BV404_RS01465 ffb0d8412a7e4b2bb8b90124409f069a 293 Pfam PF08220 DeoR-like helix-turn-helix domain 10 51 1.1E-4 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BV404_RS07450 186ebb3362c188eaac38dc590d9e00ca 264 Pfam PF13503 Domain of unknown function (DUF4123) 32 126 3.3E-19 T 09-03-2017 IPR025391 Domain of unknown function DUF4123 BV404_RS11165 ac79d4b2b92d9815c8cd41a0683e5814 145 Pfam PF11012 Protein of unknown function (DUF2850) 58 136 2.0E-33 T 09-03-2017 IPR021271 Protein of unknown function DUF2850 BV404_RS00645 6e2be5c182e4e68a55ecbecc9751c9d3 340 SUPERFAMILY SSF102114 102 324 3.4E-24 T 09-03-2017 BV404_RS00645 6e2be5c182e4e68a55ecbecc9751c9d3 340 Pfam PF04055 Radical SAM superfamily 117 252 2.3E-10 T 09-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 BV404_RS00645 6e2be5c182e4e68a55ecbecc9751c9d3 340 Pfam PF13353 4Fe-4S single cluster domain 115 182 7.7E-7 T 09-03-2017 BV404_RS00645 6e2be5c182e4e68a55ecbecc9751c9d3 340 Gene3D G3DSA:3.20.20.70 105 313 5.4E-14 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 BV404_RS00645 6e2be5c182e4e68a55ecbecc9751c9d3 340 TIGRFAM TIGR00238 TIGR00238: KamA family protein 13 328 6.0E-123 T 09-03-2017 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase BV404_RS00645 6e2be5c182e4e68a55ecbecc9751c9d3 340 PIRSF PIRSF004911 3 340 7.6E-113 T 09-03-2017 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase BV404_RS00645 6e2be5c182e4e68a55ecbecc9751c9d3 340 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 16 335 5.8E-153 T 09-03-2017 IPR022462 Lysine-2,3-aminomutase-like BV404_RS03140 c3e5aa91bf53aeb3af9893cc2aceeb57 377 Pfam PF16539 Flagellar assembly protein T, middle domain 114 256 3.1E-42 T 09-03-2017 IPR032386 Flagellar assembly protein T, middle domain BV404_RS03140 c3e5aa91bf53aeb3af9893cc2aceeb57 377 Pfam PF16538 Flagellar assembly protein T, C-terminal domain 299 375 3.0E-27 T 09-03-2017 IPR032388 Flagellar assembly protein T, C-terminal BV404_RS03140 c3e5aa91bf53aeb3af9893cc2aceeb57 377 Pfam PF16548 Flagellar assembly protein T, N-terminal domain 24 110 1.4E-25 T 09-03-2017 IPR032370 Flagellar assembly protein T, N-terminal BV404_RS07140 ce45b96bc7ee260b2deda28fab9547d6 224 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 8 211 5.5E-55 T 09-03-2017 BV404_RS04410 8cc3e849bc971bb78a0c6ee4f24a1770 203 SMART SM01144 1 190 5.5E-71 T 09-03-2017 IPR005636 DTW BV404_RS04410 8cc3e849bc971bb78a0c6ee4f24a1770 203 Pfam PF03942 DTW domain 3 185 5.7E-49 T 09-03-2017 IPR005636 DTW BV404_RS08405 9c4d423c0763f2df32ef32c99e97c043 408 Gene3D G3DSA:3.40.640.10 36 269 4.4E-63 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 BV404_RS08405 9c4d423c0763f2df32ef32c99e97c043 408 TIGRFAM TIGR01976 am_tr_V_VC1184: cysteine desulfurase family protein 3 405 1.7E-162 T 09-03-2017 IPR011340 Cysteine desulfurase-related BV404_RS08405 9c4d423c0763f2df32ef32c99e97c043 408 Pfam PF00266 Aminotransferase class-V 25 401 3.1E-72 T 09-03-2017 IPR000192 Aminotransferase class V domain BV404_RS08405 9c4d423c0763f2df32ef32c99e97c043 408 SUPERFAMILY SSF53383 5 407 9.28E-96 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase BV404_RS08405 9c4d423c0763f2df32ef32c99e97c043 408 Gene3D G3DSA:3.90.1150.10 270 407 2.4E-37 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 BV404_RS12450 be9f7c8214688cdecfd437fe35dcf625 253 Pfam PF06738 Putative threonine/serine exporter 10 247 7.9E-70 T 09-03-2017 IPR010619 Putative threonine/serine exporter BV404_RS10330 cf13811fd3609505b58cdb57aa03b7c9 293 Pfam PF00892 EamA-like transporter family 5 135 3.1E-15 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 BV404_RS10330 cf13811fd3609505b58cdb57aa03b7c9 293 Pfam PF00892 EamA-like transporter family 151 282 1.1E-15 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 BV404_RS10330 cf13811fd3609505b58cdb57aa03b7c9 293 SUPERFAMILY SSF103481 200 287 2.35E-11 T 09-03-2017 BV404_RS10330 cf13811fd3609505b58cdb57aa03b7c9 293 SUPERFAMILY SSF103481 38 138 1.03E-8 T 09-03-2017 BV404_RS06285 86abb7398d85f406fe024e0e3d04c3b1 817 Pfam PF12704 MacB-like periplasmic core domain 465 656 2.0E-7 T 09-03-2017 IPR025857 MacB-like periplasmic core domain BV404_RS06285 86abb7398d85f406fe024e0e3d04c3b1 817 Pfam PF02687 FtsX-like permease family 693 807 4.1E-8 T 09-03-2017 IPR003838 ABC transporter permease protein domain GO:0016020 BV404_RS06285 86abb7398d85f406fe024e0e3d04c3b1 817 Pfam PF02687 FtsX-like permease family 244 368 4.3E-9 T 09-03-2017 IPR003838 ABC transporter permease protein domain GO:0016020 BV404_RS06285 86abb7398d85f406fe024e0e3d04c3b1 817 Gene3D G3DSA:2.40.40.20 569 627 8.2E-4 T 09-03-2017 BV404_RS05345 e1be440d70967b607d635b6e4f50233b 122 Gene3D G3DSA:3.10.129.10 11 110 2.8E-11 T 09-03-2017 IPR029069 HotDog domain BV404_RS05345 e1be440d70967b607d635b6e4f50233b 122 PIRSF PIRSF030962 1 122 2.4E-50 T 09-03-2017 IPR016962 Dehydrase, ECs4332, predicted BV404_RS05345 e1be440d70967b607d635b6e4f50233b 122 SUPERFAMILY SSF54637 11 105 2.09E-12 T 09-03-2017 IPR029069 HotDog domain BV404_RS07145 1d952f0c50a9d9f2217b4cc720b9f2f5 57 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 1.7E-21 T 09-03-2017 IPR004714 Cytochrome oxidase maturation protein cbb3-type BV404_RS07145 1d952f0c50a9d9f2217b4cc720b9f2f5 57 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 46 5.2E-17 T 09-03-2017 IPR004714 Cytochrome oxidase maturation protein cbb3-type BV404_RS03680 62f61f11fcfd8a56566896208b586a3c 176 Pfam PF04315 Elongation factor P hydroxylase 11 171 2.9E-72 T 09-03-2017 IPR007411 Elongation factor P hydroxylase BV404_RS09280 dd11c649846ea00b138176688dc860b2 159 SUPERFAMILY SSF56524 36 134 4.45E-11 T 09-03-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 BV404_RS06765 a899e84ae997ef6599b71756d59e67f4 353 SUPERFAMILY SSF111369 58 107 6.41E-15 T 09-03-2017 BV404_RS06765 a899e84ae997ef6599b71756d59e67f4 353 SUPERFAMILY SSF111369 195 289 6.41E-15 T 09-03-2017 BV404_RS06765 a899e84ae997ef6599b71756d59e67f4 353 SUPERFAMILY SSF111369 143 159 6.41E-15 T 09-03-2017 BV404_RS06765 a899e84ae997ef6599b71756d59e67f4 353 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 294 6.7E-18 T 09-03-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BV404_RS06765 a899e84ae997ef6599b71756d59e67f4 353 Gene3D G3DSA:2.40.50.100 216 247 1.2E-16 T 09-03-2017 BV404_RS06765 a899e84ae997ef6599b71756d59e67f4 353 Gene3D G3DSA:2.40.50.100 60 92 1.2E-16 T 09-03-2017 BV404_RS03040 e198efc8a796e50313cc598fb6e94cc1 281 SUPERFAMILY SSF56235 2 253 9.07E-52 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal BV404_RS03040 e198efc8a796e50313cc598fb6e94cc1 281 Gene3D G3DSA:3.60.20.10 1 251 1.3E-68 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal BV404_RS03040 e198efc8a796e50313cc598fb6e94cc1 281 Pfam PF13230 Glutamine amidotransferases class-II 1 255 5.1E-113 T 09-03-2017 IPR026869 Putative glutamine amidotransferase type 2 BV404_RS15315 12297cc0e7c003e5ae82ad90d9e21100 59 Pfam PF00474 Sodium:solute symporter family 1 34 2.7E-6 T 09-03-2017 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 BV404_RS15315 12297cc0e7c003e5ae82ad90d9e21100 59 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 16 36 - T 09-03-2017 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 BV404_RS06695 3b878baa0891cfba1fa6bdea4983b352 335 Pfam PF02653 Branched-chain amino acid transport system / permease component 40 324 5.5E-48 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 BV404_RS02320 fc9b44afadcaee90895e01e8703d99ca 168 Gene3D G3DSA:3.40.630.30 1 127 1.2E-20 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS02320 fc9b44afadcaee90895e01e8703d99ca 168 Pfam PF13527 Acetyltransferase (GNAT) domain 3 123 9.7E-11 T 09-03-2017 BV404_RS02320 fc9b44afadcaee90895e01e8703d99ca 168 SUPERFAMILY SSF55729 1 160 9.37E-28 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS11575 1c50c55ea5db6ead068757693b5d7c74 206 Pfam PF03458 UPF0126 domain 8 81 4.6E-22 T 09-03-2017 IPR005115 Uncharacterised domain UPF0126 BV404_RS11575 1c50c55ea5db6ead068757693b5d7c74 206 Pfam PF03458 UPF0126 domain 95 164 1.2E-18 T 09-03-2017 IPR005115 Uncharacterised domain UPF0126 BV404_RS06960 c2965b761ef11a90b3bbcda7709e783f 263 Pfam PF04116 Fatty acid hydroxylase superfamily 88 225 1.3E-25 T 09-03-2017 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 BV404_RS14825 5493e93ec0bcabe340d1bc9d32953bd6 135 Pfam PF03748 Flagellar basal body-associated protein FliL 33 135 2.5E-19 T 09-03-2017 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 BV404_RS22155 e29c270408ac161234fc0e63495170d0 110 Pfam PF13654 AAA domain 54 110 1.4E-7 T 09-03-2017 BV404_RS02405 f968db334694279a90fddcdee4d35d42 264 Pfam PF01925 Sulfite exporter TauE/SafE 10 261 3.8E-50 T 09-03-2017 IPR002781 Transmembrane protein TauE-like GO:0016021 BV404_RS05820 c1edcfdcda9af69b9175d85336c6f742 243 Pfam PF04288 MukE-like family 10 235 1.4E-118 T 09-03-2017 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 BV404_RS05820 c1edcfdcda9af69b9175d85336c6f742 243 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 10 240 50.102 T 09-03-2017 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 BV404_RS06975 2436c24e0403fd89fbcea7407d24a391 89 Pfam PF11173 Protein of unknown function (DUF2960) 1 76 1.5E-35 T 09-03-2017 IPR021343 Protein of unknown function DUF2960 BV404_RS08995 65b6dfd5c52f4bcfc2890123d6d20269 176 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 23 164 8.7E-46 T 09-03-2017 IPR018639 Domain of unknown function DUF2062 BV404_RS14050 515f8a6ec1ed2972bcd6f13ff9ea35b3 94 Gene3D G3DSA:3.30.70.260 1 74 4.5E-12 T 09-03-2017 BV404_RS14050 515f8a6ec1ed2972bcd6f13ff9ea35b3 94 Pfam PF13710 ACT domain 12 73 1.2E-21 T 09-03-2017 BV404_RS14050 515f8a6ec1ed2972bcd6f13ff9ea35b3 94 SUPERFAMILY SSF55021 3 74 1.54E-10 T 09-03-2017 BV404_RS13160 bff0e6a7e6f5bd6549347d3303eb2e67 141 SUPERFAMILY SSF55729 10 112 2.24E-9 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS13160 bff0e6a7e6f5bd6549347d3303eb2e67 141 Gene3D G3DSA:3.40.630.30 21 118 1.2E-9 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS13160 bff0e6a7e6f5bd6549347d3303eb2e67 141 Pfam PF13673 Acetyltransferase (GNAT) domain 21 111 7.0E-6 T 09-03-2017 IPR000182 GNAT domain GO:0008080 BV404_RS02035 821e42d2a2e70eb00aadcee4876bde41 251 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 246 56.768 T 09-03-2017 IPR005224 Sugar fermentation stimulation protein BV404_RS02035 821e42d2a2e70eb00aadcee4876bde41 251 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 1 233 1.3E-76 T 09-03-2017 IPR005224 Sugar fermentation stimulation protein BV404_RS02035 821e42d2a2e70eb00aadcee4876bde41 251 Pfam PF03749 Sugar fermentation stimulation protein 13 237 9.7E-76 T 09-03-2017 IPR005224 Sugar fermentation stimulation protein BV404_RS05130 c044bc81f3c30d189cf0690d1417c56f 312 Gene3D G3DSA:3.40.50.1980 25 148 7.4E-19 T 09-03-2017 BV404_RS05130 c044bc81f3c30d189cf0690d1417c56f 312 Gene3D G3DSA:3.40.50.1980 149 305 6.8E-18 T 09-03-2017 BV404_RS05130 c044bc81f3c30d189cf0690d1417c56f 312 SUPERFAMILY SSF53807 27 290 4.32E-36 T 09-03-2017 BV404_RS05130 c044bc81f3c30d189cf0690d1417c56f 312 Pfam PF01497 Periplasmic binding protein 46 285 7.6E-18 T 09-03-2017 IPR002491 ABC transporter periplasmic binding domain GO:0005488 BV404_RS03405 00e6e25ecb3f936e5bac96b77e4cd590 398 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 18 249 1.6E-70 T 09-03-2017 IPR018642 Protein of unknown function DUF2066 BV404_RS03720 63ff0c3379373ed69da9495bcdef84ed 176 Gene3D G3DSA:3.10.129.10 10 156 8.8E-36 T 09-03-2017 IPR029069 HotDog domain BV404_RS03720 63ff0c3379373ed69da9495bcdef84ed 176 SUPERFAMILY SSF54637 11 156 1.26E-22 T 09-03-2017 IPR029069 HotDog domain BV404_RS03720 63ff0c3379373ed69da9495bcdef84ed 176 Pfam PF14539 Domain of unknown function (DUF4442) 14 151 1.1E-23 T 09-03-2017 IPR027961 Protein of unknown function DUF4442 BV404_RS16485 038c3de7f16f9b7215a652caf72108e6 123 Gene3D G3DSA:3.40.50.2300 80 123 1.5E-5 T 09-03-2017 BV404_RS06875 b53fd00411ea27d4d5dbd5b4c073dd18 256 PIRSF PIRSF028069 2 256 6.5E-100 T 09-03-2017 IPR016866 Uncharacterised conserved protein UCP028069 BV404_RS06875 b53fd00411ea27d4d5dbd5b4c073dd18 256 Pfam PF11932 Protein of unknown function (DUF3450) 9 249 2.5E-82 T 09-03-2017 IPR016866 Uncharacterised conserved protein UCP028069 BV404_RS02915 85d4ec5edd26d8c062cf58dc4a17444d 280 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 238 264 - T 09-03-2017 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981 BV404_RS02915 85d4ec5edd26d8c062cf58dc4a17444d 280 Pfam PF01148 Cytidylyltransferase family 2 280 7.1E-70 T 09-03-2017 BV404_RS10895 ac08e9b6dc3a17d0da6a1a6932c42f69 204 PIRSF PIRSF006170 1 204 1.6E-53 T 09-03-2017 IPR026039 Uncharacterised protein family UPF0070 BV404_RS10895 ac08e9b6dc3a17d0da6a1a6932c42f69 204 Pfam PF09976 Tetratricopeptide repeat-like domain 15 204 3.0E-55 T 09-03-2017 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038 BV404_RS10895 ac08e9b6dc3a17d0da6a1a6932c42f69 204 Gene3D G3DSA:1.25.40.10 92 171 9.0E-6 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BV404_RS10895 ac08e9b6dc3a17d0da6a1a6932c42f69 204 SUPERFAMILY SSF48452 90 189 1.93E-6 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BV404_RS04230 6050b82207eac5b19603bbae428ad9f5 174 Pfam PF02620 Uncharacterized ACR, COG1399 62 173 8.0E-17 T 09-03-2017 IPR003772 Protein of unknown function DUF177 BV404_RS05315 7b7bc4425c7eb452e829795c129ee146 204 Pfam PF11659 Protein of unknown function (DUF3261) 10 168 2.9E-43 T 09-03-2017 IPR021675 Protein of unknown function DUF3261 BV404_RS02815 d44bd03190cfaba6f3f150e092ee1efc 415 Hamap MF_01063 Esterase FrsA [frsA]. 4 415 55.827 T 09-03-2017 IPR010520 UPF0255 family BV404_RS02815 d44bd03190cfaba6f3f150e092ee1efc 415 Gene3D G3DSA:3.40.50.1820 347 388 1.2E-19 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold BV404_RS02815 d44bd03190cfaba6f3f150e092ee1efc 415 Gene3D G3DSA:3.40.50.1820 156 300 1.2E-19 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold BV404_RS02815 d44bd03190cfaba6f3f150e092ee1efc 415 SUPERFAMILY SSF53474 47 411 6.04E-43 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold BV404_RS02815 d44bd03190cfaba6f3f150e092ee1efc 415 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 5 414 1.8E-224 T 09-03-2017 IPR010520 UPF0255 family BV404_RS02705 65a74944062dbdd61aa7a52b843cb5d7 210 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 3 207 1.9E-108 T 09-03-2017 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 BV404_RS02705 65a74944062dbdd61aa7a52b843cb5d7 210 PIRSF PIRSF006102 3 210 2.2E-72 T 09-03-2017 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 BV404_RS02705 65a74944062dbdd61aa7a52b843cb5d7 210 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 36.963 T 09-03-2017 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 BV404_RS02705 65a74944062dbdd61aa7a52b843cb5d7 210 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 195 1.4E-62 T 09-03-2017 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 BV404_RS06630 20378c8d16784ad28ac887e15bf081fa 158 Pfam PF11163 Protein of unknown function (DUF2947) 3 154 1.0E-73 T 09-03-2017 IPR021334 Protein of unknown function DUF2947 BV404_RS14480 744c61b5dd01f0c4cd42b945e28b6929 107 Pfam PF10625 Universal stress protein B (UspB) 1 106 3.8E-50 T 09-03-2017 IPR019598 Universal stress protein B BV404_RS14480 744c61b5dd01f0c4cd42b945e28b6929 107 Hamap MF_01088 Universal stress protein B [uspB]. 1 107 36.032 T 09-03-2017 IPR019598 Universal stress protein B BV404_RS07120 64f9d154e7739d903c3f5f64728521e8 220 Pfam PF11205 Protein of unknown function (DUF2987) 23 166 1.5E-54 T 09-03-2017 IPR021370 Protein of unknown function DUF2987 BV404_RS10090 809ed2c6d5f604437ef78305302e0a60 156 Pfam PF07295 Zinc-ribbon containing domain 14 153 8.9E-49 T 09-03-2017 IPR009912 Zinc-ribbon containing domain BV404_RS12575 ff7c57a8fe1ec05922030e25f1e1afe1 232 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site BV404_RS12575 ff7c57a8fe1ec05922030e25f1e1afe1 232 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 25 2.6E-6 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site BV404_RS04110 a4fd22e6e2af77fc1b8fe4479c8f0eca 504 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 17 435 7.2E-140 T 09-03-2017 IPR002823 Protein of unknown function DUF112, transmembrane BV404_RS09050 6368384d18502d1b6b4e5e933f0fa772 196 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 3 187 4.7E-75 T 09-03-2017 IPR014094 Penicillin-binding protein activator LpoB BV404_RS09050 6368384d18502d1b6b4e5e933f0fa772 196 Pfam PF13036 Peptidoglycan-synthase activator LpoB 9 185 9.6E-65 T 09-03-2017 IPR014094 Penicillin-binding protein activator LpoB BV404_RS09050 6368384d18502d1b6b4e5e933f0fa772 196 Gene3D G3DSA:3.30.1830.10 17 50 8.2E-4 T 09-03-2017 IPR009736 Protein of unknown function DUF1307 BV404_RS14470 537ff4bb4b5e762de0e54958b80839b0 141 SUPERFAMILY SSF52402 3 139 9.21E-34 T 09-03-2017 BV404_RS14470 537ff4bb4b5e762de0e54958b80839b0 141 Pfam PF00582 Universal stress protein family 3 138 3.5E-21 T 09-03-2017 IPR006016 UspA GO:0006950 BV404_RS14470 537ff4bb4b5e762de0e54958b80839b0 141 Gene3D G3DSA:3.40.50.620 3 139 3.3E-31 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BV404_RS14470 537ff4bb4b5e762de0e54958b80839b0 141 PIRSF PIRSF006276 1 141 6.2E-53 T 09-03-2017 IPR006015 Universal stress protein A BV404_RS14720 3975f84911053eb6026930fb47d5e551 205 PIRSF PIRSF006324 1 205 1.1E-54 T 09-03-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 BV404_RS14720 3975f84911053eb6026930fb47d5e551 205 Pfam PF01810 LysE type translocator 15 202 4.2E-35 T 09-03-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 BV404_RS07945 8643fe2d894ceb751caa143a21a3da4c 76 Pfam PF09016 Pas factor saposin fold 1 76 5.4E-45 T 09-03-2017 IPR015106 Pas factor saposin domain BV404_RS03395 01e3f8969fff8ef33ae91b8c6295e5d3 159 Gene3D G3DSA:3.90.960.10 1 158 7.7E-60 T 09-03-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 BV404_RS03395 01e3f8969fff8ef33ae91b8c6295e5d3 159 SUPERFAMILY SSF55826 2 156 1.44E-44 T 09-03-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 BV404_RS03395 01e3f8969fff8ef33ae91b8c6295e5d3 159 PIRSF PIRSF006181 1 159 7.7E-53 T 09-03-2017 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC BV404_RS03395 01e3f8969fff8ef33ae91b8c6295e5d3 159 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 2.0E-58 T 09-03-2017 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC BV404_RS03395 01e3f8969fff8ef33ae91b8c6295e5d3 159 Pfam PF04073 Aminoacyl-tRNA editing domain 32 146 4.0E-24 T 09-03-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 BV404_RS12185 061ad1712abf5d2dae6c6f4753a51c23 232 Pfam PF04402 Protein of unknown function (DUF541) 31 228 7.2E-39 T 09-03-2017 IPR007497 Protein of unknown function DUF541 BV404_RS03510 a26c6b347227c710c3f8c2e3e22ea0ce 117 Pfam PF11169 Protein of unknown function (DUF2956) 8 112 9.1E-43 T 09-03-2017 IPR021339 Protein of unknown function DUF2956 BV404_RS07740 3698dda109e30f0494185d85c228c18c 138 SUPERFAMILY SSF55961 2 134 2.86E-26 T 09-03-2017 BV404_RS07740 3698dda109e30f0494185d85c228c18c 138 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 11 132 1.8E-21 T 09-03-2017 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 BV404_RS07740 3698dda109e30f0494185d85c228c18c 138 Gene3D G3DSA:3.30.530.20 2 135 1.3E-22 T 09-03-2017 IPR023393 START-like domain BV404_RS12635 0bf8de2ddf33eeb1b018329446cec1bd 216 Gene3D G3DSA:3.30.70.60 115 192 9.4E-4 T 09-03-2017 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 BV404_RS08655 e27390e0ec2e78cd8fea5e52223faf78 165 Gene3D G3DSA:3.40.50.2300 5 132 1.9E-20 T 09-03-2017 BV404_RS08655 e27390e0ec2e78cd8fea5e52223faf78 165 SUPERFAMILY SSF52172 1 146 2.99E-20 T 09-03-2017 IPR011006 CheY-like superfamily BV404_RS08655 e27390e0ec2e78cd8fea5e52223faf78 165 SMART SM00448 4 125 6.5E-9 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS08655 e27390e0ec2e78cd8fea5e52223faf78 165 Pfam PF00072 Response regulator receiver domain 6 125 8.8E-14 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BV404_RS02520 f833a1e0575a9091a21fec7da05ab05f 125 SUPERFAMILY SSF141371 1 120 1.35E-31 T 09-03-2017 BV404_RS02520 f833a1e0575a9091a21fec7da05ab05f 125 Gene3D G3DSA:2.40.10.220 1 122 1.6E-42 T 09-03-2017 BV404_RS02520 f833a1e0575a9091a21fec7da05ab05f 125 PIRSF PIRSF028141 1 120 9.1E-39 T 09-03-2017 IPR027021 Cyclic di-GMP binding protein, PA4608 type BV404_RS02520 f833a1e0575a9091a21fec7da05ab05f 125 Pfam PF07238 PilZ domain 3 100 2.0E-12 T 09-03-2017 IPR009875 PilZ domain GO:0035438 BV404_RS06475 15524f8e999396b973a840dbc00b18e7 427 PIRSF PIRSF006066 1 426 7.9E-73 T 09-03-2017 IPR004681 TRAP transporter permease protein GO:0016021 BV404_RS06475 15524f8e999396b973a840dbc00b18e7 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 422 3.0E-105 T 09-03-2017 IPR004681 TRAP transporter permease protein GO:0016021 BV404_RS06475 15524f8e999396b973a840dbc00b18e7 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 423 4.8E-101 T 09-03-2017 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit BV404_RS08965 31252213dc6099db9ee6475d1913d55e 515 Pfam PF04293 SpoVR like protein 23 452 3.5E-177 T 09-03-2017 IPR007390 Sporulation stage V, protein R BV404_RS01840 da5bae4aef38f1280fc9f8acf6a59cf6 261 Gene3D G3DSA:1.20.5.110 175 216 5.3E-18 T 09-03-2017 BV404_RS01840 da5bae4aef38f1280fc9f8acf6a59cf6 261 Gene3D G3DSA:1.10.287.70 127 173 8.3E-17 T 09-03-2017 BV404_RS01840 da5bae4aef38f1280fc9f8acf6a59cf6 261 Gene3D G3DSA:1.20.120.350 11 126 7.1E-16 T 09-03-2017 IPR027359 Voltage-dependent channel, four helix bundle domain BV404_RS01840 da5bae4aef38f1280fc9f8acf6a59cf6 261 SUPERFAMILY SSF81324 9 210 6.67E-47 T 09-03-2017 BV404_RS01840 da5bae4aef38f1280fc9f8acf6a59cf6 261 Pfam PF00520 Ion transport protein 20 208 1.1E-15 T 09-03-2017 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 BV404_RS01870 b8c3fb5bff08de0bc64366a426dbf44c 149 Pfam PF06853 Protein of unknown function (DUF1249) 28 140 1.5E-39 T 09-03-2017 IPR009659 Protein of unknown function DUF1249 BV404_RS01615 2b48dffeed6452420e3e5a1682485ff9 210 SUPERFAMILY SSF48498 87 206 3.61E-6 T 09-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal BV404_RS01615 2b48dffeed6452420e3e5a1682485ff9 210 Gene3D G3DSA:1.10.357.10 2 205 7.3E-40 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 BV404_RS01615 2b48dffeed6452420e3e5a1682485ff9 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 63 1.4E-8 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BV404_RS01615 2b48dffeed6452420e3e5a1682485ff9 210 Pfam PF14514 Transcriptional regulator, TetR, C-terminal 88 208 9.4E-7 T 09-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal BV404_RS01615 2b48dffeed6452420e3e5a1682485ff9 210 SUPERFAMILY SSF46689 7 84 1.69E-14 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 BV404_RS09055 727910a44e84d0230f62c516d37047c2 129 Pfam PF07233 Protein of unknown function (DUF1425) 35 125 3.4E-30 T 09-03-2017 IPR010824 Protein of unknown function DUF1425 BV404_RS02325 17381cf33c4d19f4c348dc9509de5be9 135 Pfam PF03603 DNA polymerase III psi subunit 4 130 4.5E-35 T 09-03-2017 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS02325 17381cf33c4d19f4c348dc9509de5be9 135 PIRSF PIRSF029225 2 134 6.5E-38 T 09-03-2017 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS02325 17381cf33c4d19f4c348dc9509de5be9 135 Gene3D G3DSA:3.40.50.10220 34 132 2.3E-31 T 09-03-2017 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS02325 17381cf33c4d19f4c348dc9509de5be9 135 SUPERFAMILY SSF102220 32 132 5.1E-25 T 09-03-2017 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BV404_RS11430 a76b1dd40f0b268a5cf33bf51ea82100 321 Pfam PF02653 Branched-chain amino acid transport system / permease component 11 275 2.3E-34 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 BV404_RS11500 2474bb7736abc3d1e304a249051ef1e0 161 SUPERFAMILY SSF89562 1 158 9.81E-49 T 09-03-2017 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein BV404_RS11500 2474bb7736abc3d1e304a249051ef1e0 161 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 3.7E-69 T 09-03-2017 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 BV404_RS11500 2474bb7736abc3d1e304a249051ef1e0 161 Pfam PF03737 Demethylmenaquinone methyltransferase 5 152 3.7E-43 T 09-03-2017 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein BV404_RS11500 2474bb7736abc3d1e304a249051ef1e0 161 Gene3D G3DSA:3.50.30.40 5 158 1.5E-50 T 09-03-2017 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein BV404_RS06455 24ad9006278415f52dd01edde20d5f84 225 Pfam PF11201 Protein of unknown function (DUF2982) 67 217 1.6E-59 T 09-03-2017 IPR021367 Protein of unknown function DUF2982 BV404_RS08330 6a8c73bfe7ad5efc3e88b5d159e1e926 161 Pfam PF16157 Domain of unknown function (DUF4865) 1 117 9.3E-40 T 09-03-2017 IPR032349 Protein of unknown function DUF4865 BV404_RS08330 6a8c73bfe7ad5efc3e88b5d159e1e926 161 SUPERFAMILY SSF54909 17 87 9.54E-5 T 09-03-2017 IPR011008 Dimeric alpha-beta barrel BV404_RS08520 b0110b29589fa7caeebb881f235b678c 129 Pfam PF16549 Type II secretion system (T2SS) pilotin, S protein 15 129 2.0E-49 T 09-03-2017 IPR016502 Type II secretion system (T2SS) pilotin, S protein BV404_RS08520 b0110b29589fa7caeebb881f235b678c 129 PIRSF PIRSF007010 1 129 3.6E-52 T 09-03-2017 IPR016502 Type II secretion system (T2SS) pilotin, S protein BV404_RS13535 d1f1b7c7175c4fb07d7e97e4a6cfd394 437 Pfam PF04932 O-Antigen ligase 200 367 5.4E-16 T 09-03-2017 IPR007016 O-antigen ligase-related BV404_RS06135 61856ac2cfc39fdd891543ec5aedb832 418 Pfam PF03222 Tryptophan/tyrosine permease family 31 388 2.5E-11 T 09-03-2017 IPR018227 Tryptophan/tyrosine permease GO:0003333 BV404_RS05905 b4d522e272265dd3fa4b7093fc20a375 58 Pfam PF06796 Periplasmic nitrate reductase protein NapE 8 55 1.4E-25 T 09-03-2017 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE BV404_RS05905 b4d522e272265dd3fa4b7093fc20a375 58 TIGRFAM TIGR02972 TMAO_torE: trimethylamine N-oxide reductase system, TorE protein 11 57 5.1E-30 T 09-03-2017 IPR014316 Trimethylamine N-oxide reductase system, TorE BV404_RS11450 e0a6b02d9b7a9a33ad830a2ec7b7a30d 59 Pfam PF12065 Protein of unknown function (DUF3545) 1 58 1.5E-23 T 09-03-2017 IPR021932 Protein of unknown function DUF3545 BV404_RS06775 ed84a8f583f48b8dee8c903347cf12f3 160 SUPERFAMILY SSF55729 4 147 9.33E-25 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS06775 ed84a8f583f48b8dee8c903347cf12f3 160 Pfam PF13673 Acetyltransferase (GNAT) domain 37 148 2.3E-12 T 09-03-2017 IPR000182 GNAT domain GO:0008080 BV404_RS06775 ed84a8f583f48b8dee8c903347cf12f3 160 Gene3D G3DSA:3.40.630.30 2 147 1.6E-25 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS12855 94b31c51a729c78e105c6b82f6938831 62 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 52 2.4E-13 T 09-03-2017 IPR007419 BFD-like [2Fe-2S]-binding domain BV404_RS22405 7cead25b5b07b2e9012828993a07cb57 208 Pfam PF11898 Domain of unknown function (DUF3418) 30 207 2.3E-87 T 09-03-2017 IPR024590 RNA helicase HrpA, C-terminal BV404_RS08950 27d85fdd2dce529b83d60eecb4beaaf2 251 Pfam PF06629 MltA-interacting protein MipA 30 251 6.6E-44 T 09-03-2017 IPR010583 MltA-interacting MipA BV404_RS13745 a1f2bbc8d1280ac4123ba67dee53f599 152 Pfam PF07681 DoxX 24 104 7.8E-18 T 09-03-2017 IPR032808 DoxX family BV404_RS05605 430a24f99f9ce531b177d069c7f3b032 179 Pfam PF11086 Protein of unknown function (DUF2878) 5 150 1.2E-26 T 09-03-2017 IPR021306 Protein of unknown function DUF2878 BV404_RS10630 734e1eaa4129889d16b859fcc348c563 154 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 2 148 30.554 T 09-03-2017 IPR003791 Protein of unknown function UPF0178 BV404_RS10630 734e1eaa4129889d16b859fcc348c563 154 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 19 146 7.5E-48 T 09-03-2017 IPR003791 Protein of unknown function UPF0178 BV404_RS06205 2b9199d9f8c8274a2205059921c5689b 162 Pfam PF14316 Domain of unknown function (DUF4381) 13 152 7.9E-22 T 09-03-2017 IPR025489 Protein of unknown function (DUF4381 BV404_RS03735 6171f24750edccfb7730e81ab1191f51 229 Pfam PF04172 LrgB-like family 14 224 2.3E-70 T 09-03-2017 IPR007300 CidB/LrgB family BV404_RS07030 d95aea756d96c99756cb470de87c283d 153 Pfam PF11749 Protein of unknown function (DUF3305) 57 143 8.6E-19 T 09-03-2017 IPR021736 Protein of unknown function DUF3305 BV404_RS03605 054a6492774332d02729f26302f13034 628 Pfam PF02120 Flagellar hook-length control protein FliK 499 582 4.5E-27 T 09-03-2017 IPR021136 Flagellar hook-length control protein-like, C-terminal BV404_RS14195 f69ed7e912d02071043a7b3d55179008 257 Gene3D G3DSA:3.40.50.300 3 254 2.5E-71 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS14195 f69ed7e912d02071043a7b3d55179008 257 SUPERFAMILY SSF52540 2 253 3.89E-67 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS14195 f69ed7e912d02071043a7b3d55179008 257 Pfam PF13614 AAA domain 2 178 3.6E-63 T 09-03-2017 IPR025669 AAA domain BV404_RS06640 69b5143c6b783eba336dd3531ea1a21a 472 PIRSF PIRSF002457 1 472 1.0E-114 T 09-03-2017 IPR030676 Citrate carrier CitT-related BV404_RS06640 69b5143c6b783eba336dd3531ea1a21a 472 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 35 462 2.6E-79 T 09-03-2017 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 BV404_RS06640 69b5143c6b783eba336dd3531ea1a21a 472 Pfam PF00939 Sodium:sulfate symporter transmembrane region 5 462 4.8E-50 T 09-03-2017 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 BV404_RS10205 e20e56547dea4899aebee87645cb17a1 132 Pfam PF13338 Transcriptional regulator, AbiEi antitoxin 35 117 1.2E-6 T 09-03-2017 IPR025159 Transcriptional regulator, AbiEi antitoxin BV404_RS13400 c2e290f6897a3517205e080e215d78d6 311 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 18 292 3.0E-34 T 09-03-2017 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD BV404_RS13400 c2e290f6897a3517205e080e215d78d6 311 TIGRFAM TIGR00374 TIGR00374: TIGR00374 family protein 198 307 4.6E-17 T 09-03-2017 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD BV404_RS07520 ed9a008ef9680436dd54333007dfb94b 210 Pfam PF10816 Domain of unknown function (DUF2760) 87 209 8.3E-54 T 09-03-2017 IPR021212 Domain of unknown function DUF2760 BV404_RS04210 68c2898c2185fedeeed143ed641bbf26 252 Pfam PF04338 Protein of unknown function, DUF481 42 252 5.8E-40 T 09-03-2017 IPR007433 Protein of unknown function DUF481 BV404_RS02480 5c1f1463450ab28078127ac0d59643fa 599 Gene3D G3DSA:3.40.50.720 399 496 3.2E-7 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS02480 5c1f1463450ab28078127ac0d59643fa 599 SUPERFAMILY SSF51735 399 496 5.63E-7 T 09-03-2017 IPR016040 NAD(P)-binding domain BV404_RS02480 5c1f1463450ab28078127ac0d59643fa 599 Pfam PF02254 TrkA-N domain 399 491 5.5E-6 T 09-03-2017 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 BV404_RS02480 5c1f1463450ab28078127ac0d59643fa 599 Pfam PF00999 Sodium/hydrogen exchanger family 15 386 5.4E-32 T 09-03-2017 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 BV404_RS11245 32ff36da3e89898a0e06f5f7cf54b629 114 Gene3D G3DSA:2.40.50.140 7 113 5.9E-33 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS11245 32ff36da3e89898a0e06f5f7cf54b629 114 Pfam PF01588 Putative tRNA binding domain 18 111 3.5E-26 T 09-03-2017 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 BV404_RS11245 32ff36da3e89898a0e06f5f7cf54b629 114 SUPERFAMILY SSF50249 11 113 8.32E-30 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold BV404_RS04600 082f856f51d0085fb0506aa3906d4c73 175 Pfam PF04170 NlpE N-terminal domain 79 165 1.4E-31 T 09-03-2017 IPR007298 Copper resistance lipoprotein NlpE BV404_RS01735 b9456fc87a88642251453687b1cfdd2d 156 PIRSF PIRSF004923 1 156 2.0E-39 T 09-03-2017 IPR026268 Protein RseC BV404_RS01735 b9456fc87a88642251453687b1cfdd2d 156 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 16 149 4.0E-33 T 09-03-2017 IPR007359 Positive regulator of sigma(E), RseC/MucC BV404_RS06175 0468ff562c2f21d92ee7b8d44e25c98d 549 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 45 539 1.8E-171 T 09-03-2017 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 BV404_RS06175 0468ff562c2f21d92ee7b8d44e25c98d 549 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 84 539 2.1E-133 T 09-03-2017 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 BV404_RS01080 972cf38ce98e803a1e43de88c56cbb5d 192 Pfam PF08525 Opacity-associated protein A N-terminal motif 40 66 9.5E-9 T 09-03-2017 IPR013731 Opacity-associated protein A, N-terminal BV404_RS01080 972cf38ce98e803a1e43de88c56cbb5d 192 Pfam PF04225 Opacity-associated protein A LysM-like domain 108 192 8.9E-38 T 09-03-2017 IPR007340 Opacity-associated protein A BV404_RS06830 f6289f79c69df4b1aa11aa1a15065f4d 162 Gene3D G3DSA:2.60.120.370 3 159 3.0E-39 T 09-03-2017 IPR004375 YhcH/YjgK/YiaL family BV404_RS06830 f6289f79c69df4b1aa11aa1a15065f4d 162 SUPERFAMILY SSF51197 19 158 1.04E-35 T 09-03-2017 BV404_RS06830 f6289f79c69df4b1aa11aa1a15065f4d 162 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 2 158 2.8E-35 T 09-03-2017 IPR004375 YhcH/YjgK/YiaL family BV404_RS06830 f6289f79c69df4b1aa11aa1a15065f4d 162 Pfam PF04074 Domain of unknown function (DUF386) 3 156 2.6E-37 T 09-03-2017 IPR004375 YhcH/YjgK/YiaL family BV404_RS05645 42662add2513171a9ac602ee7fd87053 533 Pfam PF03553 Na+/H+ antiporter family 165 497 1.2E-101 T 09-03-2017 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 BV404_RS06720 5ec3963bfcd0f9eb48e6bf2cba4bbc5e 201 Pfam PF01810 LysE type translocator 14 190 1.4E-15 T 09-03-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 BV404_RS04095 ebc0f1c64cb99b1b232582e51e88edb6 277 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 8 270 6.4E-64 T 09-03-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 BV404_RS04095 ebc0f1c64cb99b1b232582e51e88edb6 277 Gene3D G3DSA:3.40.830.10 1 277 6.8E-106 T 09-03-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 BV404_RS04095 ebc0f1c64cb99b1b232582e51e88edb6 277 SUPERFAMILY SSF53213 2 277 7.72E-93 T 09-03-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 BV404_RS07050 1fb4d36e381297604fb60bc8a4fbe92c 65 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 10 32 5.3E-6 T 09-03-2017 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal BV404_RS07050 1fb4d36e381297604fb60bc8a4fbe92c 65 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 10 37 3.1E-6 T 09-03-2017 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal BV404_RS07050 1fb4d36e381297604fb60bc8a4fbe92c 65 PIRSF PIRSF036704 1 65 3.6E-32 T 09-03-2017 IPR014177 Putative formate dehydrogenase, TAT signal-containing BV404_RS07050 1fb4d36e381297604fb60bc8a4fbe92c 65 TIGRFAM TIGR02811 formate_TAT: formate dehydrogenase region TAT target 1 65 2.7E-25 T 09-03-2017 IPR014177 Putative formate dehydrogenase, TAT signal-containing BV404_RS02665 ce15d763770d802f9015ab953ad7b945 461 SUPERFAMILY SSF103473 10 437 3.14E-35 T 09-03-2017 IPR020846 Major facilitator superfamily domain BV404_RS02665 ce15d763770d802f9015ab953ad7b945 461 Gene3D G3DSA:1.20.1250.20 258 438 3.4E-15 T 09-03-2017 BV404_RS02665 ce15d763770d802f9015ab953ad7b945 461 Gene3D G3DSA:1.20.1250.20 18 218 1.2E-15 T 09-03-2017 BV404_RS02665 ce15d763770d802f9015ab953ad7b945 461 Pfam PF07690 Major Facilitator Superfamily 24 399 2.6E-14 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BV404_RS12250 f50963dfbb0395fb8d2524a1d97974fe 166 Hamap MF_00746 Protein SprT [sprT]. 8 161 40.256 T 09-03-2017 IPR023483 Uncharacterised protein family SprT BV404_RS12250 f50963dfbb0395fb8d2524a1d97974fe 166 SMART SM00731 12 161 4.2E-53 T 09-03-2017 IPR006640 SprT-like BV404_RS12250 f50963dfbb0395fb8d2524a1d97974fe 166 Pfam PF10263 SprT-like family 16 160 8.0E-29 T 09-03-2017 IPR006640 SprT-like BV404_RS06110 2b07e7a6806f23c2b7345fd24837ce5c 82 Pfam PF06945 Protein of unknown function (DUF1289) 11 56 3.6E-18 T 09-03-2017 IPR010710 Protein of unknown function DUF1289 BV404_RS07975 e2a4c28be74995dd9a038f402a840f1b 266 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 266 47.778 T 09-03-2017 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 BV404_RS07975 e2a4c28be74995dd9a038f402a840f1b 266 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 14 247 1.5E-32 T 09-03-2017 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 BV404_RS07975 e2a4c28be74995dd9a038f402a840f1b 266 Pfam PF02654 Cobalamin-5-phosphate synthase 15 248 5.0E-51 T 09-03-2017 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 BV404_RS04630 d3ec8a3863035135f51b6491c8184431 355 Pfam PF02120 Flagellar hook-length control protein FliK 237 318 5.6E-20 T 09-03-2017 IPR021136 Flagellar hook-length control protein-like, C-terminal BV404_RS10260 9fcdcdcd38dd57c66c77dff384895d3e 119 Pfam PF03829 PTS system glucitol/sorbitol-specific IIA component 5 116 6.2E-36 T 09-03-2017 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 BV404_RS10260 9fcdcdcd38dd57c66c77dff384895d3e 119 ProDom PD015842 PTS IIA COMPONENT GLUCITOL/SORBITOL-SPECIFIC SYSTEM ENZYME TRANSFERASE SYSTEM PHOSPHOTRANSFERASE EIIA 6 118 7.0E-22 T 09-03-2017 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 BV404_RS10260 9fcdcdcd38dd57c66c77dff384895d3e 119 Gene3D G3DSA:2.40.33.40 1 118 2.5E-38 T 09-03-2017 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 BV404_RS10260 9fcdcdcd38dd57c66c77dff384895d3e 119 SUPERFAMILY SSF141530 4 118 1.31E-34 T 09-03-2017 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 BV404_RS02805 0f6930f7fb83cad46968ee8cd6c8160c 430 Pfam PF00860 Permease family 17 390 4.2E-54 T 09-03-2017 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 BV404_RS02805 0f6930f7fb83cad46968ee8cd6c8160c 430 PIRSF PIRSF005353 1 430 5.6E-187 T 09-03-2017 IPR026033 Purine permease PbuG-like BV404_RS07920 50e6357883c3b6d943b9550004425f70 191 Gene3D G3DSA:1.10.3420.10 166 189 1.2E-17 T 09-03-2017 IPR023292 NTP pyrophosphohydrolase-like domain BV404_RS07920 50e6357883c3b6d943b9550004425f70 191 Gene3D G3DSA:1.10.3420.10 12 127 1.2E-17 T 09-03-2017 IPR023292 NTP pyrophosphohydrolase-like domain BV404_RS07920 50e6357883c3b6d943b9550004425f70 191 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 19 82 2.9E-8 T 09-03-2017 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 BV404_RS11355 f14e9b9cc0b0c4f2772bd149e4ddbfd1 68 Pfam PF06568 Domain of unknown function (DUF1127) 24 59 1.2E-12 T 09-03-2017 IPR009506 Protein of unknown function DUF1127 BV404_RS12445 a7f525f71e8983bb65854cf624b02c4f 157 Pfam PF12821 Threonine/Serine exporter, ThrE 13 147 1.6E-35 T 09-03-2017 IPR024528 Threonine/Serine exporter, ThrE BV404_RS12115 a7f5716ab27cad6b4641d06d4ae35788 290 Pfam PF13280 WYL domain 121 285 1.2E-17 T 09-03-2017 IPR026881 WYL domain BV404_RS12115 a7f5716ab27cad6b4641d06d4ae35788 290 Gene3D G3DSA:1.10.10.10 6 61 7.4E-5 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain BV404_RS13435 9a7f75446036d7645ac722fc33e5feaa 365 Pfam PF01757 Acyltransferase family 12 338 2.1E-24 T 09-03-2017 IPR002656 Acyltransferase 3 GO:0016747 BV404_RS10165 56535236d95fa106d8c0d9ed759fd57e 200 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 11 186 2.2E-33 T 09-03-2017 IPR003740 Uncharacterised membrane protein YitT BV404_RS03025 a71dc483ec33a8a03c65b45682b6dc71 416 TIGRFAM TIGR03503 TIGR03503: TIGR03503 family protein 24 399 1.1E-141 T 09-03-2017 IPR020010 Conserved hypothetical protein CHP03503 BV404_RS08450 cde984be9031f96b2c066c8957c529f9 206 Pfam PF01300 Telomere recombination 23 198 1.2E-47 T 09-03-2017 IPR006070 YrdC-like domain GO:0003725 BV404_RS08450 cde984be9031f96b2c066c8957c529f9 206 Gene3D G3DSA:3.90.870.10 2 202 2.1E-65 T 09-03-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain BV404_RS08450 cde984be9031f96b2c066c8957c529f9 206 SUPERFAMILY SSF55821 1 203 1.01E-65 T 09-03-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain BV404_RS08450 cde984be9031f96b2c066c8957c529f9 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 3.7E-72 T 09-03-2017 IPR006070 YrdC-like domain GO:0003725 BV404_RS06890 59747481782b88d33b19654bbb2747ad 134 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 132 2.9E-29 T 09-03-2017 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 BV404_RS10240 aa7b20d28c86b478dbdd1e194f88feef 118 Pfam PF06923 Glucitol operon activator protein (GutM) 7 110 3.1E-30 T 09-03-2017 IPR009693 Glucitol operon activator BV404_RS05070 34a6186ed98762077967e7cfe7a6b6a3 141 Pfam PF07681 DoxX 19 98 3.7E-19 T 09-03-2017 IPR032808 DoxX family BV404_RS14695 4ad16a07aaedf39e91d4596932fdb80b 198 SMART SM01144 2 191 7.6E-60 T 09-03-2017 IPR005636 DTW BV404_RS14695 4ad16a07aaedf39e91d4596932fdb80b 198 Pfam PF03942 DTW domain 4 183 1.9E-46 T 09-03-2017 IPR005636 DTW BV404_RS01160 0b49e16457dd00e3ce8ccf29102b1f6c 97 Pfam PF10795 Protein of unknown function (DUF2607) 3 96 4.2E-39 T 09-03-2017 IPR019731 Protein of unknown function DUF2607 BV404_RS08615 aa69faf786c4e12b431324c407d63ad8 271 Pfam PF11060 Protein of unknown function (DUF2861) 22 267 2.1E-52 T 09-03-2017 IPR021290 Protein of unknown function DUF2861 BV404_RS01705 caabf38dd0ab1db4738a04d507eebcac 86 Gene3D G3DSA:1.10.150.250 3 83 8.4E-30 T 09-03-2017 IPR005631 Flavinator of succinate dehydrogenase BV404_RS01705 caabf38dd0ab1db4738a04d507eebcac 86 Pfam PF03937 Flavinator of succinate dehydrogenase 7 77 2.8E-25 T 09-03-2017 IPR005631 Flavinator of succinate dehydrogenase BV404_RS01705 caabf38dd0ab1db4738a04d507eebcac 86 SUPERFAMILY SSF109910 3 79 1.96E-26 T 09-03-2017 IPR005631 Flavinator of succinate dehydrogenase BV404_RS10415 a43aeebd2f71050aa48117c95260c218 374 SUPERFAMILY SSF53756 2 271 1.7E-19 T 09-03-2017 BV404_RS08805 3cd22e08fd674eb53e4dbf06352a574e 35 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 30 1.1E-20 T 09-03-2017 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 BV404_RS08805 3cd22e08fd674eb53e4dbf06352a574e 35 Pfam PF08173 Membrane bound YbgT-like protein 1 27 1.2E-17 T 09-03-2017 IPR012994 Membrane bound YbgT-like BV404_RS03610 0b4cc56e01d290f185eb801ef03820dd 165 Pfam PF03748 Flagellar basal body-associated protein FliL 64 165 9.9E-20 T 09-03-2017 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 BV404_RS07405 5b9ff662cda29380f2cac50c8d848e93 295 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 84 266 8.6E-16 T 09-03-2017 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 BV404_RS07405 5b9ff662cda29380f2cac50c8d848e93 295 Gene3D G3DSA:3.20.20.60 64 285 3.7E-36 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 BV404_RS07405 5b9ff662cda29380f2cac50c8d848e93 295 SUPERFAMILY SSF51621 103 270 4.28E-29 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 BV404_RS10670 44963f11f622706f1e5286f986c5ca6b 63 Pfam PF14056 Domain of unknown function (DUF4250) 8 62 7.6E-20 T 09-03-2017 IPR025346 Protein of unknown function DUF4250 BV404_RS06670 b181ff6cb98da3872fdf9f03017a1ff3 67 Pfam PF04400 Protein of unknown function (DUF539) 21 63 6.5E-22 T 09-03-2017 IPR007495 (Na+)-NQR maturation factor NqrM BV404_RS11425 d2342cdc6a0c19a7992a9a5134e46c85 370 Pfam PF02653 Branched-chain amino acid transport system / permease component 60 342 3.0E-36 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 BV404_RS14660 a387e1351b63d6ee006b885166e21423 71 Pfam PF13627 Prokaryotic lipoprotein-attachment site 39 61 8.5E-10 T 09-03-2017 IPR032831 Prokaryotic lipoprotein-attachment site BV404_RS00440 6f6a3fa321725c4392ce7d95d608913a 481 Pfam PF03606 C4-dicarboxylate anaerobic carrier 20 476 1.6E-135 T 09-03-2017 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 BV404_RS08555 aae5736eff8303994df53474d4bd14c3 143 Pfam PF13673 Acetyltransferase (GNAT) domain 41 128 4.2E-13 T 09-03-2017 IPR000182 GNAT domain GO:0008080 BV404_RS08555 aae5736eff8303994df53474d4bd14c3 143 SUPERFAMILY SSF55729 14 129 2.87E-22 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS08555 aae5736eff8303994df53474d4bd14c3 143 Gene3D G3DSA:3.40.630.30 12 128 6.8E-33 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase BV404_RS04200 6ccbbbebbb5fe7da75be38e7ef8f4dcf 291 SUPERFAMILY SSF103481 198 290 5.1E-5 T 09-03-2017 BV404_RS04200 6ccbbbebbb5fe7da75be38e7ef8f4dcf 291 SUPERFAMILY SSF103481 37 143 2.09E-6 T 09-03-2017 BV404_RS09025 fcd2e27d429d8ea43483b884a8fc8d2a 258 Pfam PF10972 Peptidoglycan-binding protein, CsiV 5 255 2.2E-65 T 09-03-2017 IPR021241 Peptidoglycan-binding protein, CsiV BV404_RS05745 79f5dcf7b41d05c0986a337e13577ef0 82 Pfam PF10692 Protein of unknown function (DUF2498) 3 80 1.6E-40 T 09-03-2017 IPR019633 Protein of unknown function DUF2498 BV404_RS12255 8dd71254e9720cb3e044426f556af7b3 233 SUPERFAMILY SSF54060 24 231 2.12E-93 T 09-03-2017 BV404_RS12255 8dd71254e9720cb3e044426f556af7b3 233 Pfam PF04231 Endonuclease I 36 229 4.1E-44 T 09-03-2017 IPR007346 Endonuclease I GO:0004518 BV404_RS05445 030cab8574f99e54883b4096d4b1da1f 150 Pfam PF04217 Protein of unknown function, DUF412 8 146 2.6E-58 T 09-03-2017 IPR007334 Uncharacterised protein family UPF0208 BV404_RS05445 030cab8574f99e54883b4096d4b1da1f 150 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 5 150 35.739 T 09-03-2017 IPR007334 Uncharacterised protein family UPF0208 BV404_RS11220 93e287ab535f1be0adbdc75935e781bd 394 Pfam PF05940 NnrS protein 16 388 4.1E-109 T 09-03-2017 IPR010266 NnrS BV404_RS04100 898262dbf8abd9c9b226c92be5efcaec 335 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 46 302 1.2E-41 T 09-03-2017 IPR005064 Bordetella uptake gene GO:0030288 BV404_RS04100 898262dbf8abd9c9b226c92be5efcaec 335 PIRSF PIRSF017082 2 323 9.2E-64 T 09-03-2017 IPR005064 Bordetella uptake gene GO:0030288 BV404_RS04100 898262dbf8abd9c9b226c92be5efcaec 335 SUPERFAMILY SSF53850 119 287 4.34E-7 T 09-03-2017 BV404_RS07195 fbd267996a420f5903cba648cbe6ae65 30 Pfam PF01566 Natural resistance-associated macrophage protein 1 26 1.5E-8 T 09-03-2017 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 BV404_RS06710 df18bb6c8be93f40038186c9f80153e6 165 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 21 156 3.1E-16 T 09-03-2017 IPR009936 Protein of unknown function DUF1468 BV404_RS07865 fdb930e6f5f53b59d5908b5ae9cc3065 124 Pfam PF13671 AAA domain 5 95 2.8E-13 T 09-03-2017 BV404_RS07865 fdb930e6f5f53b59d5908b5ae9cc3065 124 Gene3D G3DSA:3.40.50.300 5 100 3.4E-18 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS07865 fdb930e6f5f53b59d5908b5ae9cc3065 124 SUPERFAMILY SSF52540 6 99 1.73E-11 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase BV404_RS03435 a218b942a4d018b6d53acd823d08fc0c 357 Pfam PF01594 Domain of unknown function DUF20 20 345 2.9E-75 T 09-03-2017 IPR002549 Transmembrane protein TqsA-like BV404_RS02725 120401da74a5473cf40e6267311d6273 77 Pfam PF04400 Protein of unknown function (DUF539) 22 63 1.7E-21 T 09-03-2017 IPR007495 (Na+)-NQR maturation factor NqrM BV404_RS04465 59ffe490bcb299e97f35ce0734a8afac 307 Pfam PF03601 Conserved hypothetical protein 698 27 288 1.3E-51 T 09-03-2017 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 BV404_RS12245 f904321713bf43dedcce770f3f36d952 265 Pfam PF09955 Predicted integral membrane protein (DUF2189) 82 195 3.2E-26 T 09-03-2017 IPR018692 Predicted integral membrane protein DUF2189 BV404_RS08460 23033d80cf2dd5261acbb01b37f43f4d 36 Pfam PF08056 Tryptophan operon leader peptide 1 36 2.2E-11 T 09-03-2017 IPR012639 Tryptophan operon leader peptide BV404_RS08460 23033d80cf2dd5261acbb01b37f43f4d 36 ProDom PD926058 BIOSYNTHESIS PEPTIDE LEADER AROMATIC VC1176 VV1222 OPERON ACID AMINO AMINO-ACID 1 36 3.0E-4 T 09-03-2017 IPR012639 Tryptophan operon leader peptide BV404_RS02995 2315d211b80daba7c2ee60c5ad8b8052 228 Pfam PF06930 Protein of unknown function (DUF1282) 14 223 2.7E-43 T 09-03-2017 IPR009698 Protein of unknown function DUF1282 BV404_RS03070 4ca3a8ced02bb6a917e1ea92f40ecb64 46 Pfam PF11346 Protein of unknown function (DUF3149) 4 43 2.8E-16 T 09-03-2017 IPR021494 Protein of unknown function DUF3149 BV404_RS08785 ae7fbc9658621c708eeb7fa89b870207 147 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 144 1.9E-25 T 09-03-2017 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 BV404_RS08785 ae7fbc9658621c708eeb7fa89b870207 147 TIGRFAM TIGR02801 tolR: protein TolR 12 144 5.9E-38 T 09-03-2017 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 BV404_RS05615 23b8e4b4b92820a604daf6c285f28904 175 Pfam PF12915 Protein of unknown function (DUF3833) 14 174 4.1E-66 T 09-03-2017 IPR024409 Protein of unknown function DUF3833 BV404_RS10845 c113cc96cf047224766519b791988e75 314 Pfam PF01758 Sodium Bile acid symporter family 36 213 4.9E-37 T 09-03-2017 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 BV404_RS00380 f1e948ca468a1d0c3e46577a1b4bbbc4 221 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 14 204 1.2E-61 T 09-03-2017 IPR003744 Protein of unknown function DUF165 BV404_RS00380 f1e948ca468a1d0c3e46577a1b4bbbc4 221 Pfam PF02592 Putative vitamin uptake transporter 43 199 5.2E-38 T 09-03-2017 IPR003744 Protein of unknown function DUF165 BV404_RS10290 ae4c02d7133aaa7036d737bd7609a7f2 324 SUPERFAMILY SSF53822 23 322 2.14E-66 T 09-03-2017 IPR028082 Periplasmic binding protein-like I BV404_RS10290 ae4c02d7133aaa7036d737bd7609a7f2 324 Gene3D G3DSA:3.40.50.2300 25 143 7.7E-31 T 09-03-2017 BV404_RS10290 ae4c02d7133aaa7036d737bd7609a7f2 324 Gene3D G3DSA:3.40.50.2300 144 276 4.2E-26 T 09-03-2017 BV404_RS10290 ae4c02d7133aaa7036d737bd7609a7f2 324 Pfam PF13407 Periplasmic binding protein domain 28 284 2.0E-53 T 09-03-2017 IPR025997 Periplasmic binding protein BV404_RS00485 c2868d64f306c34b18c82491d8d4ba37 181 Pfam PF07813 LTXXQ motif family protein 41 144 1.2E-20 T 09-03-2017 IPR012899 LTXXQ motif family protein GO:0042597 BV404_RS06350 60921896a47de6f6546bb50506e32828 185 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 39 176 5.4E-20 T 09-03-2017 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component BV404_RS08035 46586cf395264664e854872f3e5dd938 296 Pfam PF03547 Membrane transport protein 146 284 4.1E-10 T 09-03-2017 IPR004776 Membrane transport protein GO:0016021|GO:0055085 BV404_RS08035 46586cf395264664e854872f3e5dd938 296 Pfam PF03547 Membrane transport protein 6 141 5.2E-8 T 09-03-2017 IPR004776 Membrane transport protein GO:0016021|GO:0055085 BV404_RS08200 59216f8845e02db1a116a658f28c78dd 241 Pfam PF12119 Protein of unknown function (DUF3581) 1 217 6.3E-97 T 09-03-2017 IPR021974 Protein of unknown function DUF3581 BV404_RS09290 c7e754c1c873d8c9e117f425f103a389 232 Pfam PF01066 CDP-alcohol phosphatidyltransferase 34 105 8.4E-9 T 09-03-2017 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 BV404_RS18245 1d53de51779b3d724160c44b8f95cf67 62 Pfam PF01594 Domain of unknown function DUF20 8 62 4.0E-14 T 09-03-2017 IPR002549 Transmembrane protein TqsA-like BV404_RS04175 02b61a8e50543f200b566d45d5b54916 479 Pfam PF03553 Na+/H+ antiporter family 161 453 1.0E-65 T 09-03-2017 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 BV404_RS04175 02b61a8e50543f200b566d45d5b54916 479 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 7 457 8.6E-162 T 09-03-2017 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 BV404_RS05735 d2ed005f923009ff4b798f4c1433b6da 151 Pfam PF05433 Glycine zipper 2TM domain 56 91 5.8E-11 T 09-03-2017 IPR008816 Glycine zipper 2TM domain GO:0019867 BV404_RS07115 17ce388c36546b358166689da83f9591 262 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 123 257 2.7E-17 T 09-03-2017 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 BV404_RS06705 25a4af6a70e03b36de93dfb2e00cf513 515 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 18 444 2.2E-140 T 09-03-2017 IPR002823 Protein of unknown function DUF112, transmembrane BV404_RS17805 0842a7a505a489a92b71baf5556c3dce 93 Pfam PF07244 Surface antigen variable number repeat 36 89 4.8E-13 T 09-03-2017 IPR010827 Surface antigen variable number GO:0019867 BV404_RS20520 77654afff7d32cf76fe4cea195fafb40 629 Pfam PF16330 MukB hinge domain 424 588 2.7E-73 T 09-03-2017 IPR032520 MukB, hinge domain BV404_RS08015 0b46920cdd468c8388b099a1f345528c 226 Pfam PF04172 LrgB-like family 6 218 1.0E-71 T 09-03-2017 IPR007300 CidB/LrgB family BV404_RS10635 e00b4c9c71598d1e8cb1cb6e21b99b50 528 Pfam PF03806 AbgT putative transporter family 19 526 1.3E-225 T 09-03-2017 IPR004697 p-aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 BV404_RS14000 9fe8db57f36c6f5a6ccf5bc0e1cfa8a6 192 Pfam PF11355 Protein of unknown function (DUF3157) 2 191 2.9E-64 T 09-03-2017 IPR021501 Protein of unknown function DUF3157 BV404_RS11495 5f260d7f87a2dd48f192562d7a26c365 153 PIRSF PIRSF028680 1 153 3.9E-54 T 09-03-2017 IPR016895 Uncharacterised conserved protein UCP028680 BV404_RS06420 99ed83da116e164c123901f13111db6b 419 Pfam PF09375 Imelysin 40 397 7.1E-97 T 09-03-2017 BV404_RS11195 44bdb7578ac046a8bcb609ce029ef0df 322 Pfam PF03595 Voltage-dependent anion channel 19 308 1.4E-28 T 09-03-2017 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 BV404_RS05595 47eb084c4c4f6a2ec4e35a9cdf1eb452 265 Pfam PF07103 Protein of unknown function (DUF1365) 13 249 9.9E-69 T 09-03-2017 IPR010775 Protein of unknown function DUF1365 BV404_RS00460 10fc21eb03658c4b6b5aa1bf973bc4df 164 Pfam PF04186 FxsA cytoplasmic membrane protein 7 114 1.4E-35 T 09-03-2017 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 BV404_RS04105 ccd9d3224ad8268a49750aadb7341838 171 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 16 150 3.2E-11 T 09-03-2017 IPR009936 Protein of unknown function DUF1468 BV404_RS16660 e975226facb9d82dec87366434d89391 104 Pfam PF00482 Type II secretion system (T2SS), protein F 33 104 1.1E-11 T 09-03-2017 IPR018076 Type II secretion system F domain BV404_RS03515 ffc3e897ead3a6dda2b65fd9331d76ae 154 Pfam PF11143 Protein of unknown function (DUF2919) 3 146 8.1E-55 T 09-03-2017 IPR021318 Protein of unknown function DUF2919 BV404_RS07380 fbb6bca34fe1d8df00be97cf4e5c9311 878 Pfam PF02470 MlaD protein 747 816 5.7E-9 T 09-03-2017 IPR003399 Mce/MlaD BV404_RS07380 fbb6bca34fe1d8df00be97cf4e5c9311 878 Pfam PF02470 MlaD protein 286 375 2.2E-6 T 09-03-2017 IPR003399 Mce/MlaD BV404_RS07380 fbb6bca34fe1d8df00be97cf4e5c9311 878 Pfam PF02470 MlaD protein 649 705 3.5E-6 T 09-03-2017 IPR003399 Mce/MlaD BV404_RS07380 fbb6bca34fe1d8df00be97cf4e5c9311 878 Pfam PF02470 MlaD protein 48 138 4.0E-13 T 09-03-2017 IPR003399 Mce/MlaD BV404_RS07380 fbb6bca34fe1d8df00be97cf4e5c9311 878 Pfam PF02470 MlaD protein 166 226 5.1E-6 T 09-03-2017 IPR003399 Mce/MlaD BV404_RS07380 fbb6bca34fe1d8df00be97cf4e5c9311 878 Pfam PF02470 MlaD protein 401 461 5.4E-8 T 09-03-2017 IPR003399 Mce/MlaD BV404_RS10550 2d234da16f56a9e654c31fb4f1e11c29 132 Pfam PF04241 Protein of unknown function (DUF423) 20 110 2.3E-31 T 09-03-2017 IPR006696 Protein of unknown function DUF423 BV404_RS14540 dc5f0f2f5e2cdc56ed338c71817a60cb 510 Pfam PF02646 RmuC family 181 477 1.3E-104 T 09-03-2017 IPR003798 DNA recombination RmuC BV404_RS14095 954ba44a57c89a93a01676b9277a6ace 184 Pfam PF01169 Uncharacterized protein family UPF0016 7 80 1.1E-20 T 09-03-2017 IPR001727 Gdt1 family GO:0032472 BV404_RS14095 954ba44a57c89a93a01676b9277a6ace 184 Pfam PF01169 Uncharacterized protein family UPF0016 103 177 6.1E-20 T 09-03-2017 IPR001727 Gdt1 family GO:0032472 BV404_RS02355 45836ae540703bf2864fd0bac38370c6 437 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 413 1.9E-132 T 09-03-2017 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 BV404_RS02355 45836ae540703bf2864fd0bac38370c6 437 Pfam PF05525 Branched-chain amino acid transport protein 8 425 6.8E-148 T 09-03-2017 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 BV404_RS13550 36e5bec3b0e244f3c5c532646bc384bc 421 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 33 209 2.1E-61 T 09-03-2017 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 BV404_RS13550 36e5bec3b0e244f3c5c532646bc384bc 421 SUPERFAMILY SSF53756 51 404 8.37E-21 T 09-03-2017 BV404_RS06105 a877f7bc4d36c2152c1c398b72ede31f 147 Pfam PF03724 META domain 34 139 2.0E-27 T 09-03-2017 IPR005184 Domain of unknown function DUF306, Meta/HslJ BV404_RS10610 94cb21df6d805d393a87695bee277eb4 345 Pfam PF12069 Protein of unknown function (DUF3549) 3 339 5.7E-134 T 09-03-2017 IPR021936 Protein of unknown function DUF3549 BV404_RS08875 4329e5f6c33e59a5b7e86a5c971f6164 182 Pfam PF07445 Primosomal replication protein priC 6 179 1.1E-52 T 09-03-2017 IPR010890 Primosomal replication PriB/PriC BV404_RS07440 34631079d6cd2ed640309fcd25f3f13a 249 Pfam PF11153 Protein of unknown function (DUF2931) 6 229 2.6E-37 T 09-03-2017 IPR021326 Protein of unknown function DUF2931 BV404_RS02730 cc997f9edbb67d2400781cecacd63f19 77 Pfam PF10982 Protein of unknown function (DUF2789) 1 75 1.0E-31 T 09-03-2017 IPR021250 Protein of unknown function DUF2789 BV404_RS03730 5c82c5f59b0ac27263c873723b678d47 127 Pfam PF03788 LrgA family 13 106 1.5E-28 T 09-03-2017 IPR005538 LrgA/CidA family GO:0016021 BV404_RS04040 e83c7236aa9b5901b54fe8a7850c6a33 190 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 26 163 2.7E-16 T 09-03-2017 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component BV404_RS03675 cc07921a82c46a5c7543501b384d0b9c 207 Pfam PF03458 UPF0126 domain 5 76 3.2E-19 T 09-03-2017 IPR005115 Uncharacterised domain UPF0126 BV404_RS03675 cc07921a82c46a5c7543501b384d0b9c 207 Pfam PF03458 UPF0126 domain 92 163 6.7E-19 T 09-03-2017 IPR005115 Uncharacterised domain UPF0126 BV404_RS04045 9fd4f73dc2f5b246d402e605ce791c68 344 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 31 313 1.2E-36 T 09-03-2017 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 BV404_RS02300 21d573041ce34502f320d391a6daff3e 292 Pfam PF01136 Peptidase family U32 81 237 9.0E-16 T 09-03-2017 IPR001539 Peptidase U32 GO:0006508|GO:0008233 BV404_RS06820 e0445c6b665b7b80ef3063f208340f4f 188 Pfam PF09335 SNARE associated Golgi protein 23 143 2.6E-18 T 09-03-2017 IPR032816 SNARE associated Golgi protein BV404_RS06470 5b7e2fbd6db24625363447468e3f72a5 179 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 30 161 1.9E-26 T 09-03-2017 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component BV404_RS14490 13e3b321059733abaa53ae5dfbc08681 328 Pfam PF02653 Branched-chain amino acid transport system / permease component 61 318 3.5E-39 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 BV404_RS21680 b470a132f7bb18ff9dc1216c46c36fb5 100 Pfam PF02517 CAAX protease self-immunity 13 99 1.9E-17 T 09-03-2017 IPR003675 CAAX amino terminal protease GO:0016020 BV404_RS13050 bc0857f40d93fa8110a5b1b6f67a3af6 318 SUPERFAMILY SSF64182 5 317 4.97E-40 T 09-03-2017