locus-tag class description GPY08_RS00010 PF00005 ABC transporter GPY08_RS00010 PF03412 Peptidase C39 family GPY08_RS00010 PF00664 ABC transporter transmembrane region GPY08_RS00025 PF00529 HlyD membrane-fusion protein of T1SS GPY08_RS00115 PF13361 UvrD-like helicase C-terminal domain GPY08_RS00115 PF00580 UvrD/REP helicase N-terminal domain GPY08_RS00115 PF12462 DNA helicase IV / RNA helicase N terminal GPY08_RS00120 PF00857 Isochorismatase family GPY08_RS00125 PF02142 MGS-like domain GPY08_RS00130 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GPY08_RS00135 PF00512 His Kinase A (phospho-acceptor) domain GPY08_RS00135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY08_RS00135 PF00072 Response regulator receiver domain GPY08_RS00135 PF00672 HAMP domain GPY08_RS00135 PF01627 Hpt domain GPY08_RS00140 PF02887 Pyruvate kinase, alpha/beta domain GPY08_RS00140 PF00224 Pyruvate kinase, barrel domain GPY08_RS00155 PF00672 HAMP domain GPY08_RS00155 PF00512 His Kinase A (phospho-acceptor) domain GPY08_RS00155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY08_RS00160 PF00072 Response regulator receiver domain GPY08_RS00160 PF14532 Sigma-54 interaction domain GPY08_RS00160 PF02954 Bacterial regulatory protein, Fis family GPY08_RS00170 PF00465 Iron-containing alcohol dehydrogenase GPY08_RS00175 PF12833 Helix-turn-helix domain GPY08_RS00175 PF06719 AraC-type transcriptional regulator N-terminus GPY08_RS00195 PF00990 Diguanylate cyclase, GGDEF domain GPY08_RS00195 PF17158 Membrane-associated sensor, integral membrane domain GPY08_RS00215 PF07549 SecD/SecF GG Motif GPY08_RS00215 PF02355 Protein export membrane protein GPY08_RS00215 PF13721 SecD export protein N-terminal TM region GPY08_RS00220 PF02355 Protein export membrane protein GPY08_RS00220 PF07549 SecD/SecF GG Motif GPY08_RS00225 PF00106 short chain dehydrogenase GPY08_RS00230 PF00108 Thiolase, N-terminal domain GPY08_RS00230 PF02803 Thiolase, C-terminal domain GPY08_RS00240 PF00561 alpha/beta hydrolase fold GPY08_RS00240 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus GPY08_RS00260 PF03264 NapC/NirT cytochrome c family, N-terminal region GPY08_RS00265 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) GPY08_RS00270 PF00384 Molybdopterin oxidoreductase GPY08_RS00270 PF01568 Molydopterin dinucleotide binding domain GPY08_RS00270 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GPY08_RS00285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY08_RS00285 PF00672 HAMP domain GPY08_RS00285 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term GPY08_RS00285 PF07730 Histidine kinase GPY08_RS00290 PF00072 Response regulator receiver domain GPY08_RS00290 PF00196 Bacterial regulatory proteins, luxR family GPY08_RS00295 PF03606 C4-dicarboxylate anaerobic carrier GPY08_RS00310 PF07690 Major Facilitator Superfamily GPY08_RS00315 PF12729 Four helix bundle sensory module for signal transduction GPY08_RS00315 PF00672 HAMP domain GPY08_RS00315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY08_RS00320 PF13419 Haloacid dehalogenase-like hydrolase GPY08_RS00325 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GPY08_RS00325 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GPY08_RS00335 PF00691 OmpA family GPY08_RS00335 PF05736 OprF membrane domain GPY08_RS00340 PF08447 PAS fold GPY08_RS00340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY08_RS00345 PF02779 Transketolase, pyrimidine binding domain GPY08_RS00345 PF02780 Transketolase, C-terminal domain GPY08_RS00345 PF00456 Transketolase, thiamine diphosphate binding domain GPY08_RS00350 PF00923 Transaldolase/Fructose-6-phosphate aldolase GPY08_RS00360 PF00581 Rhodanese-like domain GPY08_RS00365 PF00899 ThiF family GPY08_RS00370 PF03453 MoeA N-terminal region (domain I and II) GPY08_RS00370 PF03454 MoeA C-terminal region (domain IV) GPY08_RS00370 PF00994 Probable molybdopterin binding domain GPY08_RS00385 PF05985 Ethanolamine ammonia-lyase light chain (EutC) GPY08_RS00390 PF06751 Ethanolamine ammonia lyase large subunit (EutB) GPY08_RS00400 PF12833 Helix-turn-helix domain GPY08_RS00405 PF01641 SelR domain GPY08_RS00405 PF01625 Peptide methionine sulfoxide reductase GPY08_RS00420 PF03466 LysR substrate binding domain GPY08_RS00420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS00425 PF13419 Haloacid dehalogenase-like hydrolase GPY08_RS00430 PF14760 Rnk N-terminus GPY08_RS00430 PF01272 Transcription elongation factor, GreA/GreB, C-term GPY08_RS00440 PF13419 Haloacid dehalogenase-like hydrolase GPY08_RS00450 PF00266 Aminotransferase class-V GPY08_RS00460 PF00005 ABC transporter GPY08_RS00465 PF00528 Binding-protein-dependent transport system inner membrane component GPY08_RS00470 PF07702 UTRA domain GPY08_RS00470 PF00392 Bacterial regulatory proteins, gntR family GPY08_RS00480 PF00246 Zinc carboxypeptidase GPY08_RS00480 PF18027 Cytosolic carboxypeptidase N-terminal domain GPY08_RS00505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GPY08_RS00510 PF00528 Binding-protein-dependent transport system inner membrane component GPY08_RS00520 PF00005 ABC transporter GPY08_RS00520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GPY08_RS00525 PF12804 MobA-like NTP transferase domain GPY08_RS00525 PF03479 Plants and Prokaryotes Conserved (PCC) domain GPY08_RS00525 PF00132 Bacterial transferase hexapeptide (six repeats) GPY08_RS00545 PF01590 GAF domain GPY08_RS00545 PF00563 EAL domain GPY08_RS00545 PF00990 Diguanylate cyclase, GGDEF domain GPY08_RS00545 PF00360 Phytochrome region GPY08_RS00550 PF00196 Bacterial regulatory proteins, luxR family GPY08_RS00550 PF00072 Response regulator receiver domain GPY08_RS00555 PF07694 5TMR of 5TMR-LYT GPY08_RS00555 PF00990 Diguanylate cyclase, GGDEF domain GPY08_RS00570 PF05525 Branched-chain amino acid transport protein GPY08_RS00585 PF08774 VRR-NUC domain GPY08_RS00585 PF18081 Fanconi anemia-associated nuclease SAP domain GPY08_RS00610 PF01799 [2Fe-2S] binding domain GPY08_RS00610 PF00111 2Fe-2S iron-sulfur cluster binding domain GPY08_RS00635 PF00465 Iron-containing alcohol dehydrogenase GPY08_RS00640 PF06719 AraC-type transcriptional regulator N-terminus GPY08_RS00640 PF12833 Helix-turn-helix domain GPY08_RS00675 PF01380 SIS domain GPY08_RS00675 PF01418 Helix-turn-helix domain, rpiR family GPY08_RS00680 PF13580 SIS domain GPY08_RS00690 PF07690 Major Facilitator Superfamily GPY08_RS00705 PF02129 X-Pro dipeptidyl-peptidase (S15 family) GPY08_RS00710 PF00486 Transcriptional regulatory protein, C terminal GPY08_RS00740 PF00155 Aminotransferase class I and II GPY08_RS00745 PF02311 AraC-like ligand binding domain GPY08_RS00745 PF12833 Helix-turn-helix domain GPY08_RS00750 PF01641 SelR domain GPY08_RS00750 PF01625 Peptide methionine sulfoxide reductase GPY08_RS00755 PF00860 Permease family GPY08_RS00765 PF01177 Asp/Glu/Hydantoin racemase GPY08_RS00775 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin GPY08_RS00785 PF00528 Binding-protein-dependent transport system inner membrane component GPY08_RS00790 PF00528 Binding-protein-dependent transport system inner membrane component GPY08_RS00795 PF00005 ABC transporter GPY08_RS00805 PF13593 SBF-like CPA transporter family (DUF4137) GPY08_RS00810 PF01425 Amidase GPY08_RS00820 PF00266 Aminotransferase class-V GPY08_RS00840 PF01979 Amidohydrolase family GPY08_RS00845 PF00576 HIUase/Transthyretin family GPY08_RS00850 PF01014 Uricase GPY08_RS00850 PF09349 OHCU decarboxylase GPY08_RS00865 PF01799 [2Fe-2S] binding domain GPY08_RS00865 PF00111 2Fe-2S iron-sulfur cluster binding domain GPY08_RS00870 PF02608 ABC transporter substrate-binding protein PnrA-like GPY08_RS00890 PF08362 YcdC-like protein, C-terminal region GPY08_RS00890 PF00440 Bacterial regulatory proteins, tetR family GPY08_RS00900 PF08448 PAS fold GPY08_RS00900 PF00990 Diguanylate cyclase, GGDEF domain GPY08_RS00910 PF00072 Response regulator receiver domain GPY08_RS00910 PF00990 Diguanylate cyclase, GGDEF domain GPY08_RS00925 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GPY08_RS00925 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch GPY08_RS00925 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GPY08_RS00930 PF02233 NAD(P) transhydrogenase beta subunit GPY08_RS00940 PF00486 Transcriptional regulatory protein, C terminal GPY08_RS00940 PF00072 Response regulator receiver domain GPY08_RS00955 PF03701 Uncharacterised protein family (UPF0181) GPY08_RS01015 PF01253 Translation initiation factor SUI1 GPY08_RS01040 PF00583 Acetyltransferase (GNAT) family GPY08_RS01040 PF13380 CoA binding domain GPY08_RS01040 PF13607 Succinyl-CoA ligase like flavodoxin domain GPY08_RS01045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS01045 PF03466 LysR substrate binding domain GPY08_RS01050 PF00593 TonB dependent receptor GPY08_RS01050 PF07715 TonB-dependent Receptor Plug Domain GPY08_RS01070 PF03061 Thioesterase superfamily GPY08_RS01075 PF01435 Peptidase family M48 GPY08_RS01080 PF03831 PhnA domain GPY08_RS01080 PF08274 PhnA Zinc-Ribbon GPY08_RS01090 PF03741 Integral membrane protein TerC family GPY08_RS01100 PF11398 Protein of unknown function (DUF2813) GPY08_RS01105 PF06496 Protein of unknown function (DUF1097) GPY08_RS01110 PF03466 LysR substrate binding domain GPY08_RS01110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS01115 PF01226 Formate/nitrite transporter GPY08_RS01120 PF04264 YceI-like domain GPY08_RS01125 PF01292 Prokaryotic cytochrome b561 GPY08_RS01160 PF00384 Molybdopterin oxidoreductase GPY08_RS01165 PF02634 FdhD/NarQ family GPY08_RS01170 PF00111 2Fe-2S iron-sulfur cluster binding domain GPY08_RS01170 PF00970 Oxidoreductase FAD-binding domain GPY08_RS01170 PF00175 Oxidoreductase NAD-binding domain GPY08_RS01175 PF00672 HAMP domain GPY08_RS01175 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GPY08_RS01175 PF00072 Response regulator receiver domain GPY08_RS01175 PF01627 Hpt domain GPY08_RS01175 PF00512 His Kinase A (phospho-acceptor) domain GPY08_RS01175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY08_RS01195 PF01926 50S ribosome-binding GTPase GPY08_RS01200 PF02492 CobW/HypB/UreG, nucleotide-binding domain GPY08_RS01200 PF07683 Cobalamin synthesis protein cobW C-terminal domain GPY08_RS01215 PF00155 Aminotransferase class I and II GPY08_RS01230 PF12320 Type 5 capsule protein repressor C-terminal domain GPY08_RS01230 PF00149 Calcineurin-like phosphoesterase GPY08_RS01235 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GPY08_RS01235 PF00356 Bacterial regulatory proteins, lacI family GPY08_RS01240 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GPY08_RS01240 PF00381 PTS HPr component phosphorylation site GPY08_RS01245 PF00294 pfkB family carbohydrate kinase GPY08_RS01250 PF02378 Phosphotransferase system, EIIC GPY08_RS01250 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GPY08_RS01255 PF08443 RimK-like ATP-grasp domain GPY08_RS01255 PF18030 RimK PreATP-grasp domain GPY08_RS01260 PF00155 Aminotransferase class I and II GPY08_RS01270 PF03477 ATP cone domain GPY08_RS01270 PF13597 Anaerobic ribonucleoside-triphosphate reductase GPY08_RS01280 PF00873 AcrB/AcrD/AcrF family GPY08_RS01285 PF00529 HlyD membrane-fusion protein of T1SS GPY08_RS01285 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GPY08_RS01295 PF04143 Sulphur transport GPY08_RS01310 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GPY08_RS01310 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY08_RS01320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS01320 PF03466 LysR substrate binding domain GPY08_RS01325 PF01810 LysE type translocator GPY08_RS01330 PF00072 Response regulator receiver domain GPY08_RS01330 PF00486 Transcriptional regulatory protein, C terminal GPY08_RS01340 PF01266 FAD dependent oxidoreductase GPY08_RS01340 PF16901 C-terminal domain of alpha-glycerophosphate oxidase GPY08_RS01350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS01350 PF03466 LysR substrate binding domain GPY08_RS01365 PF00440 Bacterial regulatory proteins, tetR family GPY08_RS01370 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GPY08_RS01370 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GPY08_RS01375 PF01596 O-methyltransferase GPY08_RS01385 PF01810 LysE type translocator GPY08_RS01400 PF00857 Isochorismatase family GPY08_RS01405 PF12833 Helix-turn-helix domain GPY08_RS01405 PF01965 DJ-1/PfpI family GPY08_RS01410 PF00583 Acetyltransferase (GNAT) family GPY08_RS01420 PF01810 LysE type translocator GPY08_RS01425 PF00293 NUDIX domain GPY08_RS01430 PF06942 GlpM protein GPY08_RS01435 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GPY08_RS01435 PF02272 DHHA1 domain GPY08_RS01435 PF01411 tRNA synthetases class II (A) GPY08_RS01450 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GPY08_RS01465 PF13419 Haloacid dehalogenase-like hydrolase GPY08_RS01470 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GPY08_RS01495 PF00583 Acetyltransferase (GNAT) family GPY08_RS01530 PF13649 Methyltransferase domain GPY08_RS01540 PF08534 Redoxin GPY08_RS01540 PF00462 Glutaredoxin GPY08_RS01545 PF00892 EamA-like transporter family GPY08_RS01555 PF02627 Carboxymuconolactone decarboxylase family GPY08_RS01560 PF13411 MerR HTH family regulatory protein GPY08_RS01625 PF09905 DNA-binding protein VF530 GPY08_RS01645 PF03239 Iron permease FTR1 family GPY08_RS01650 PF00453 Ribosomal protein L20 GPY08_RS01655 PF01632 Ribosomal protein L35 GPY08_RS01660 PF00707 Translation initiation factor IF-3, C-terminal domain GPY08_RS01660 PF05198 Translation initiation factor IF-3, N-terminal domain GPY08_RS01665 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GPY08_RS01665 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GPY08_RS01665 PF02824 TGS domain GPY08_RS01665 PF03129 Anticodon binding domain GPY08_RS01675 PF00575 S1 RNA binding domain GPY08_RS01675 PF00773 RNB domain GPY08_RS01675 PF08206 Ribonuclease B OB domain GPY08_RS01685 PF12849 PBP superfamily domain GPY08_RS01690 PF01575 MaoC like domain GPY08_RS01695 PF03466 LysR substrate binding domain GPY08_RS01695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS01710 PF00486 Transcriptional regulatory protein, C terminal GPY08_RS01715 PF02683 Cytochrome C biogenesis protein transmembrane region GPY08_RS01715 PF11412 Disulphide bond corrector protein DsbC GPY08_RS01720 PF00578 AhpC/TSA family GPY08_RS01725 PF02525 Flavodoxin-like fold GPY08_RS01730 PF00392 Bacterial regulatory proteins, gntR family GPY08_RS01730 PF00155 Aminotransferase class I and II GPY08_RS01735 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY08_RS01750 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GPY08_RS01760 PF12833 Helix-turn-helix domain GPY08_RS01765 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GPY08_RS01765 PF02378 Phosphotransferase system, EIIC GPY08_RS01765 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GPY08_RS01770 PF01238 Phosphomannose isomerase type I GPY08_RS01790 PF00753 Metallo-beta-lactamase superfamily GPY08_RS01790 PF14863 Alkyl sulfatase dimerisation GPY08_RS01790 PF14864 Alkyl sulfatase C-terminal GPY08_RS01805 PF12464 Maltose acetyltransferase GPY08_RS01805 PF14602 Hexapeptide repeat of succinyl-transferase GPY08_RS01810 PF17158 Membrane-associated sensor, integral membrane domain GPY08_RS01810 PF00990 Diguanylate cyclase, GGDEF domain GPY08_RS01815 PF12729 Four helix bundle sensory module for signal transduction GPY08_RS01815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY08_RS01815 PF00672 HAMP domain GPY08_RS01820 PF00797 N-acetyltransferase GPY08_RS01825 PF00842 Alanine racemase, C-terminal domain GPY08_RS01825 PF01168 Alanine racemase, N-terminal domain GPY08_RS01840 PF00528 Binding-protein-dependent transport system inner membrane component GPY08_RS01850 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GPY08_RS01850 PF00005 ABC transporter GPY08_RS01855 PF03466 LysR substrate binding domain GPY08_RS01855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS01860 PF00072 Response regulator receiver domain GPY08_RS01865 PF00512 His Kinase A (phospho-acceptor) domain GPY08_RS01865 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GPY08_RS01865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY08_RS01865 PF00672 HAMP domain GPY08_RS01865 PF01627 Hpt domain GPY08_RS01865 PF00072 Response regulator receiver domain GPY08_RS01870 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GPY08_RS01870 PF01627 Hpt domain GPY08_RS01870 PF00512 His Kinase A (phospho-acceptor) domain GPY08_RS01870 PF00072 Response regulator receiver domain GPY08_RS01870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY08_RS01870 PF00672 HAMP domain GPY08_RS01895 PF12833 Helix-turn-helix domain GPY08_RS01900 PF14748 Pyrroline-5-carboxylate reductase dimerisation GPY08_RS01900 PF03807 NADP oxidoreductase coenzyme F420-dependent GPY08_RS01905 PF03480 Bacterial extracellular solute-binding protein, family 7 GPY08_RS01915 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GPY08_RS01920 PF02423 Ornithine cyclodeaminase/mu-crystallin family GPY08_RS01935 PF03466 LysR substrate binding domain GPY08_RS01935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS01940 PF13409 Glutathione S-transferase, N-terminal domain GPY08_RS01945 PF02230 Phospholipase/Carboxylesterase GPY08_RS01950 PF01810 LysE type translocator GPY08_RS01965 PF01546 Peptidase family M20/M25/M40 GPY08_RS01965 PF07687 Peptidase dimerisation domain GPY08_RS01970 PF03466 LysR substrate binding domain GPY08_RS01970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS01975 PF07690 Major Facilitator Superfamily GPY08_RS01980 PF00005 ABC transporter GPY08_RS01985 PF01032 FecCD transport family GPY08_RS01990 PF01497 Periplasmic binding protein GPY08_RS01995 PF03480 Bacterial extracellular solute-binding protein, family 7 GPY08_RS02000 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GPY08_RS02005 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component GPY08_RS02010 PF02614 Glucuronate isomerase GPY08_RS02015 PF01232 Mannitol dehydrogenase Rossmann domain GPY08_RS02015 PF08125 Mannitol dehydrogenase C-terminal domain GPY08_RS02020 PF08666 SAF domain GPY08_RS02020 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus GPY08_RS02025 PF07729 FCD domain GPY08_RS02025 PF00392 Bacterial regulatory proteins, gntR family GPY08_RS02045 PF00676 Dehydrogenase E1 component GPY08_RS02050 PF02780 Transketolase, C-terminal domain GPY08_RS02050 PF02779 Transketolase, pyrimidine binding domain GPY08_RS02055 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GPY08_RS02055 PF02817 e3 binding domain GPY08_RS02055 PF00364 Biotin-requiring enzyme GPY08_RS02060 PF00766 Electron transfer flavoprotein FAD-binding domain GPY08_RS02060 PF01012 Electron transfer flavoprotein domain GPY08_RS02065 PF01012 Electron transfer flavoprotein domain GPY08_RS02075 PF02798 Glutathione S-transferase, N-terminal domain GPY08_RS02095 PF00005 ABC transporter GPY08_RS02100 PF00528 Binding-protein-dependent transport system inner membrane component GPY08_RS02105 PF00528 Binding-protein-dependent transport system inner membrane component GPY08_RS02110 PF12849 PBP superfamily domain GPY08_RS02120 PF02311 AraC-like ligand binding domain GPY08_RS02120 PF12833 Helix-turn-helix domain GPY08_RS02130 PF03180 NLPA lipoprotein GPY08_RS02135 PF00117 Glutamine amidotransferase class-I GPY08_RS02135 PF00425 chorismate binding enzyme GPY08_RS02135 PF04715 Anthranilate synthase component I, N terminal region GPY08_RS02140 PF03466 LysR substrate binding domain GPY08_RS02140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS02145 PF00072 Response regulator receiver domain GPY08_RS02145 PF00196 Bacterial regulatory proteins, luxR family GPY08_RS02150 PF07730 Histidine kinase GPY08_RS02150 PF17200 Single Cache domain 2 GPY08_RS02155 PF03480 Bacterial extracellular solute-binding protein, family 7 GPY08_RS02165 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GPY08_RS02170 PF02810 SEC-C motif GPY08_RS02170 PF07517 SecA DEAD-like domain GPY08_RS02170 PF07516 SecA Wing and Scaffold domain GPY08_RS02170 PF01043 SecA preprotein cross-linking domain GPY08_RS02175 PF07690 Major Facilitator Superfamily GPY08_RS02190 PF01144 Coenzyme A transferase GPY08_RS02200 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GPY08_RS02200 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GPY08_RS02205 PF00378 Enoyl-CoA hydratase/isomerase GPY08_RS02210 PF00378 Enoyl-CoA hydratase/isomerase GPY08_RS02220 PF00171 Aldehyde dehydrogenase family GPY08_RS02225 PF02803 Thiolase, C-terminal domain GPY08_RS02225 PF00108 Thiolase, N-terminal domain GPY08_RS02230 PF09278 MerR, DNA binding GPY08_RS02230 PF00376 MerR family regulatory protein GPY08_RS02235 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GPY08_RS02235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GPY08_RS02235 PF02770 Acyl-CoA dehydrogenase, middle domain GPY08_RS02240 PF01039 Carboxyl transferase domain GPY08_RS02245 PF00378 Enoyl-CoA hydratase/isomerase GPY08_RS02250 PF00682 HMGL-like GPY08_RS02260 PF10417 C-terminal domain of 1-Cys peroxiredoxin GPY08_RS02260 PF00578 AhpC/TSA family GPY08_RS02265 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY08_RS02265 PF13192 Thioredoxin domain GPY08_RS02270 PF01979 Amidohydrolase family GPY08_RS02275 PF00583 Acetyltransferase (GNAT) family GPY08_RS02285 PF00561 alpha/beta hydrolase fold GPY08_RS02295 PF12833 Helix-turn-helix domain GPY08_RS02300 PF00465 Iron-containing alcohol dehydrogenase GPY08_RS02320 PF00300 Histidine phosphatase superfamily (branch 1) GPY08_RS02345 PF00871 Acetokinase family GPY08_RS02355 PF07715 TonB-dependent Receptor Plug Domain GPY08_RS02355 PF00593 TonB dependent receptor GPY08_RS02360 PF12833 Helix-turn-helix domain GPY08_RS02360 PF06445 GyrI-like small molecule binding domain GPY08_RS02365 PF00005 ABC transporter GPY08_RS02370 PF01032 FecCD transport family GPY08_RS02375 PF01032 FecCD transport family GPY08_RS02395 PF05547 Immune inhibitor A peptidase M6 GPY08_RS02395 PF00801 PKD domain GPY08_RS02400 PF03280 Proteobacterial lipase chaperone protein GPY08_RS02405 PF00561 alpha/beta hydrolase fold GPY08_RS02410 PF00672 HAMP domain GPY08_RS02410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY08_RS02445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY08_RS02445 PF00672 HAMP domain GPY08_RS02445 PF12729 Four helix bundle sensory module for signal transduction GPY08_RS02460 PF02540 NAD synthase GPY08_RS02470 PF00072 Response regulator receiver domain GPY08_RS02470 PF04397 LytTr DNA-binding domain GPY08_RS02475 PF06580 Histidine kinase GPY08_RS02475 PF07694 5TMR of 5TMR-LYT GPY08_RS02480 PF00248 Aldo/keto reductase family GPY08_RS02495 PF00128 Alpha amylase, catalytic domain GPY08_RS02500 PF03413 Peptidase propeptide and YPEB domain GPY08_RS02500 PF01447 Thermolysin metallopeptidase, catalytic domain GPY08_RS02500 PF04151 Bacterial pre-peptidase C-terminal domain GPY08_RS02500 PF02868 Thermolysin metallopeptidase, alpha-helical domain GPY08_RS02500 PF07504 Fungalysin/Thermolysin Propeptide Motif GPY08_RS02505 PF03922 OmpW family GPY08_RS02510 PF00011 Hsp20/alpha crystallin family GPY08_RS02535 PF01042 Endoribonuclease L-PSP GPY08_RS02545 PF02702 Osmosensitive K+ channel His kinase sensor domain GPY08_RS02545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY08_RS02545 PF13493 Domain of unknown function (DUF4118) GPY08_RS02545 PF00512 His Kinase A (phospho-acceptor) domain GPY08_RS02555 PF02899 Phage integrase, N-terminal SAM-like domain GPY08_RS02555 PF00589 Phage integrase family GPY08_RS02565 PF03466 LysR substrate binding domain GPY08_RS02565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS02575 PF02567 Phenazine biosynthesis-like protein GPY08_RS02605 PF00005 ABC transporter GPY08_RS02605 PF00664 ABC transporter transmembrane region GPY08_RS02615 PF00563 EAL domain GPY08_RS02615 PF12792 CSS motif domain associated with EAL GPY08_RS02620 PF04138 GtrA-like protein GPY08_RS02635 PF00912 Transglycosylase GPY08_RS02645 PF01327 Polypeptide deformylase GPY08_RS02655 PF00392 Bacterial regulatory proteins, gntR family GPY08_RS02655 PF00155 Aminotransferase class I and II GPY08_RS02660 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GPY08_RS02660 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GPY08_RS02670 PF17848 Acetyl-coA carboxylase zinc finger domain GPY08_RS02670 PF01039 Carboxyl transferase domain GPY08_RS02675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS02675 PF03466 LysR substrate binding domain GPY08_RS02705 PF00483 Nucleotidyl transferase GPY08_RS02710 PF00589 Phage integrase family GPY08_RS02710 PF12167 Arm DNA-binding domain GPY08_RS02720 PF00313 'Cold-shock' DNA-binding domain GPY08_RS02740 PF08240 Alcohol dehydrogenase GroES-like domain GPY08_RS02740 PF00107 Zinc-binding dehydrogenase GPY08_RS02745 PF00155 Aminotransferase class I and II GPY08_RS02750 PF00171 Aldehyde dehydrogenase family GPY08_RS02760 PF03466 LysR substrate binding domain GPY08_RS02760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS02800 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain GPY08_RS02800 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain GPY08_RS02805 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase GPY08_RS02810 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GPY08_RS02810 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain GPY08_RS02820 PF00672 HAMP domain GPY08_RS02820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY08_RS02825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS02825 PF03466 LysR substrate binding domain GPY08_RS02840 PF02574 Homocysteine S-methyltransferase GPY08_RS02840 PF00809 Pterin binding enzyme GPY08_RS02840 PF02965 Vitamin B12 dependent methionine synthase, activation domain GPY08_RS02840 PF02607 B12 binding domain GPY08_RS02840 PF02310 B12 binding domain GPY08_RS02845 PF13520 Amino acid permease GPY08_RS02855 PF03466 LysR substrate binding domain GPY08_RS02855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS02860 PF07687 Peptidase dimerisation domain GPY08_RS02860 PF01546 Peptidase family M20/M25/M40 GPY08_RS02865 PF03806 AbgT putative transporter family GPY08_RS02870 PF02595 Glycerate kinase family GPY08_RS02875 PF02447 GntP family permease GPY08_RS02880 PF17853 GGDEF-like domain GPY08_RS02880 PF13556 PucR C-terminal helix-turn-helix domain GPY08_RS02880 PF05651 Putative sugar diacid recognition GPY08_RS02885 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GPY08_RS02885 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GPY08_RS02890 PF12793 Sugar transport-related sRNA regulator N-term GPY08_RS02890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GPY08_RS02905 PF02743 Cache domain GPY08_RS02905 PF00672 HAMP domain GPY08_RS02905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY08_RS02915 PF02743 Cache domain GPY08_RS02915 PF00672 HAMP domain GPY08_RS02915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY08_RS02920 PF00375 Sodium:dicarboxylate symporter family GPY08_RS02925 PF01042 Endoribonuclease L-PSP GPY08_RS02965 PF13629 Pilus formation protein N terminal region GPY08_RS02965 PF04972 BON domain GPY08_RS02965 PF00263 Bacterial type II and III secretion system protein GPY08_RS02970 PF00437 Type II/IV secretion system protein GPY08_RS03000 PF03960 ArsC family GPY08_RS03020 PF00478 IMP dehydrogenase / GMP reductase domain GPY08_RS03030 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GPY08_RS03030 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GPY08_RS03035 PF01256 Carbohydrate kinase GPY08_RS03035 PF03853 YjeF-related protein N-terminus GPY08_RS03045 PF00486 Transcriptional regulatory protein, C terminal GPY08_RS03045 PF00072 Response regulator receiver domain GPY08_RS03065 PF03889 Alternative ribosome-rescue factor A GPY08_RS03070 PF00313 'Cold-shock' DNA-binding domain GPY08_RS03075 PF07152 YaeQ protein GPY08_RS03080 PF00990 Diguanylate cyclase, GGDEF domain GPY08_RS03085 PF00175 Oxidoreductase NAD-binding domain GPY08_RS03085 PF00042 Globin GPY08_RS03085 PF00970 Oxidoreductase FAD-binding domain GPY08_RS03090 PF01590 GAF domain GPY08_RS03090 PF00158 Sigma-54 interaction domain GPY08_RS03105 PF01773 Na+ dependent nucleoside transporter N-terminus GPY08_RS03105 PF07670 Nucleoside recognition GPY08_RS03105 PF07662 Na+ dependent nucleoside transporter C-terminus GPY08_RS03115 PF00128 Alpha amylase, catalytic domain GPY08_RS03130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY08_RS03130 PF00672 HAMP domain GPY08_RS03130 PF02743 Cache domain GPY08_RS03155 PF07584 Aerotolerance regulator N-terminal GPY08_RS03155 PF13519 von Willebrand factor type A domain GPY08_RS03170 PF00990 Diguanylate cyclase, GGDEF domain GPY08_RS03170 PF17158 Membrane-associated sensor, integral membrane domain GPY08_RS03180 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GPY08_RS03180 PF00072 Response regulator receiver domain GPY08_RS03180 PF01627 Hpt domain GPY08_RS03180 PF00512 His Kinase A (phospho-acceptor) domain GPY08_RS03180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY08_RS03180 PF00672 HAMP domain GPY08_RS03185 PF00072 Response regulator receiver domain GPY08_RS03185 PF00990 Diguanylate cyclase, GGDEF domain GPY08_RS03190 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family GPY08_RS03195 PF04996 Succinylarginine dihydrolase GPY08_RS03200 PF00171 Aldehyde dehydrogenase family GPY08_RS03205 PF04958 Arginine N-succinyltransferase beta subunit GPY08_RS03210 PF04958 Arginine N-succinyltransferase beta subunit GPY08_RS03215 PF00202 Aminotransferase class-III GPY08_RS03225 PF13378 Enolase C-terminal domain-like GPY08_RS03225 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GPY08_RS03235 PF00528 Binding-protein-dependent transport system inner membrane component GPY08_RS03240 PF00528 Binding-protein-dependent transport system inner membrane component GPY08_RS03245 PF00497 Bacterial extracellular solute-binding proteins, family 3 GPY08_RS03250 PF03466 LysR substrate binding domain GPY08_RS03250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS03275 PF04320 Protein with unknown function (DUF469) GPY08_RS03280 PF00582 Universal stress protein family GPY08_RS03285 PF00472 RF-1 domain GPY08_RS03290 PF12843 Putative quorum-sensing-regulated virulence factor GPY08_RS03300 PF01266 FAD dependent oxidoreductase GPY08_RS03315 PF00158 Sigma-54 interaction domain GPY08_RS03315 PF02954 Bacterial regulatory protein, Fis family GPY08_RS03315 PF00072 Response regulator receiver domain GPY08_RS03330 PF09261 Alpha mannosidase middle domain GPY08_RS03330 PF07748 Glycosyl hydrolases family 38 C-terminal domain GPY08_RS03330 PF01074 Glycosyl hydrolases family 38 N-terminal domain GPY08_RS03340 PF00392 Bacterial regulatory proteins, gntR family GPY08_RS03340 PF07702 UTRA domain GPY08_RS03360 PF12729 Four helix bundle sensory module for signal transduction GPY08_RS03360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY08_RS03360 PF00672 HAMP domain GPY08_RS03365 PF13188 PAS domain GPY08_RS03365 PF03707 Bacterial signalling protein N terminal repeat GPY08_RS03365 PF00990 Diguanylate cyclase, GGDEF domain GPY08_RS03365 PF00563 EAL domain GPY08_RS03370 PF07690 Major Facilitator Superfamily GPY08_RS03375 PF03009 Glycerophosphoryl diester phosphodiesterase family GPY08_RS03380 PF01048 Phosphorylase superfamily GPY08_RS03385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS03385 PF03466 LysR substrate binding domain GPY08_RS03390 PF00356 Bacterial regulatory proteins, lacI family GPY08_RS03395 PF00294 pfkB family carbohydrate kinase GPY08_RS03400 PF13407 Periplasmic binding protein domain GPY08_RS03405 PF02653 Branched-chain amino acid transport system / permease component GPY08_RS03410 PF00005 ABC transporter GPY08_RS03415 PF05025 RbsD / FucU transport protein family GPY08_RS03460 PF10431 C-terminal, D2-small domain, of ClpB protein GPY08_RS03460 PF17871 AAA lid domain GPY08_RS03460 PF07724 AAA domain (Cdc48 subfamily) GPY08_RS03460 PF00004 ATPase family associated with various cellular activities (AAA) GPY08_RS03520 PF01037 Lrp/AsnC ligand binding domain GPY08_RS03525 PF01810 LysE type translocator GPY08_RS03530 PF01047 MarR family GPY08_RS03535 PF01545 Cation efflux family GPY08_RS03540 PF00892 EamA-like transporter family GPY08_RS03550 PF00440 Bacterial regulatory proteins, tetR family GPY08_RS03550 PF16925 Tetracyclin repressor-like, C-terminal domain GPY08_RS03565 PF01740 STAS domain GPY08_RS03565 PF00916 Sulfate permease family GPY08_RS03570 PF13419 Haloacid dehalogenase-like hydrolase GPY08_RS03575 PF00392 Bacterial regulatory proteins, gntR family GPY08_RS03575 PF07702 UTRA domain GPY08_RS03600 PF08402 TOBE domain GPY08_RS03600 PF00005 ABC transporter GPY08_RS03610 PF12792 CSS motif domain associated with EAL GPY08_RS03610 PF00563 EAL domain GPY08_RS03615 PF00248 Aldo/keto reductase family GPY08_RS03620 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GPY08_RS03625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS03625 PF03466 LysR substrate binding domain GPY08_RS03630 PF07690 Major Facilitator Superfamily GPY08_RS03650 PF00581 Rhodanese-like domain GPY08_RS03660 PF00196 Bacterial regulatory proteins, luxR family GPY08_RS03665 PF01479 S4 domain GPY08_RS03665 PF00579 tRNA synthetases class I (W and Y) GPY08_RS03670 PF13649 Methyltransferase domain GPY08_RS03675 PF03928 Haem-degrading GPY08_RS03680 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GPY08_RS03680 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GPY08_RS03685 PF00455 DeoR C terminal sensor domain GPY08_RS03685 PF08220 DeoR-like helix-turn-helix domain GPY08_RS03690 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain GPY08_RS03690 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family GPY08_RS03705 PF07968 Leukocidin/Hemolysin toxin family GPY08_RS03705 PF16458 Beta-prism lectin GPY08_RS03705 PF12563 Hemolytic toxin N terminal GPY08_RS03710 PF00657 GDSL-like Lipase/Acylhydrolase GPY08_RS03720 PF03466 LysR substrate binding domain GPY08_RS03720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS03735 PF01032 FecCD transport family GPY08_RS03740 PF01032 FecCD transport family GPY08_RS03745 PF01497 Periplasmic binding protein GPY08_RS03750 PF07715 TonB-dependent Receptor Plug Domain GPY08_RS03750 PF00593 TonB dependent receptor GPY08_RS03775 PF00672 HAMP domain GPY08_RS03775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY08_RS03785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS03785 PF03466 LysR substrate binding domain GPY08_RS03795 PF02001 Protein of unknown function DUF134 GPY08_RS03800 PF00881 Nitroreductase family GPY08_RS03805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS03805 PF03466 LysR substrate binding domain GPY08_RS03810 PF00155 Aminotransferase class I and II GPY08_RS03815 PF00497 Bacterial extracellular solute-binding proteins, family 3 GPY08_RS03820 PF00892 EamA-like transporter family GPY08_RS03835 PF07690 Major Facilitator Superfamily GPY08_RS03840 PF03466 LysR substrate binding domain GPY08_RS03840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS03845 PF00563 EAL domain GPY08_RS03845 PF03707 Bacterial signalling protein N terminal repeat GPY08_RS03845 PF13188 PAS domain GPY08_RS03845 PF00990 Diguanylate cyclase, GGDEF domain GPY08_RS03850 PF01476 LysM domain GPY08_RS03850 PF08525 Opacity-associated protein A N-terminal motif GPY08_RS03850 PF01551 Peptidase family M23 GPY08_RS03865 PF00916 Sulfate permease family GPY08_RS03865 PF01740 STAS domain GPY08_RS03880 PF17152 Periplasmic sensor domain GPY08_RS03880 PF00990 Diguanylate cyclase, GGDEF domain GPY08_RS03885 PF00005 ABC transporter GPY08_RS03890 PF00528 Binding-protein-dependent transport system inner membrane component GPY08_RS03895 PF00528 Binding-protein-dependent transport system inner membrane component GPY08_RS03900 PF12849 PBP superfamily domain GPY08_RS03905 PF12729 Four helix bundle sensory module for signal transduction GPY08_RS03905 PF00672 HAMP domain GPY08_RS03905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY08_RS03910 PF00271 Helicase conserved C-terminal domain GPY08_RS03910 PF00270 DEAD/DEAH box helicase GPY08_RS03920 PF03734 L,D-transpeptidase catalytic domain GPY08_RS03920 PF01476 LysM domain GPY08_RS03920 PF17969 L,D-transpeptidase C-terminal domain GPY08_RS03930 PF13411 MerR HTH family regulatory protein GPY08_RS03940 PF01048 Phosphorylase superfamily GPY08_RS03965 PF00529 HlyD membrane-fusion protein of T1SS GPY08_RS03965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GPY08_RS03995 PF07238 PilZ domain GPY08_RS03995 PF12945 Flagellar protein YcgR GPY08_RS04000 PF03616 Sodium/glutamate symporter GPY08_RS04015 PF02630 SCO1/SenC GPY08_RS04025 PF03193 RsgA GTPase GPY08_RS04030 PF00375 Sodium:dicarboxylate symporter family GPY08_RS04040 PF07148 Maltose operon periplasmic protein precursor (MalM) GPY08_RS04045 PF02264 LamB porin GPY08_RS04050 PF00128 Alpha amylase, catalytic domain GPY08_RS04050 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GPY08_RS04065 PF00005 ABC transporter GPY08_RS04065 PF00664 ABC transporter transmembrane region GPY08_RS04085 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GPY08_RS04085 PF12838 4Fe-4S dicluster domain GPY08_RS04085 PF01568 Molydopterin dinucleotide binding domain GPY08_RS04085 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region GPY08_RS04085 PF00384 Molybdopterin oxidoreductase GPY08_RS04110 PF00005 ABC transporter GPY08_RS04115 PF00392 Bacterial regulatory proteins, gntR family GPY08_RS04115 PF07702 UTRA domain GPY08_RS04120 PF08329 Chitinase A, N-terminal domain GPY08_RS04120 PF00704 Glycosyl hydrolases family 18 GPY08_RS04125 PF01212 Beta-eliminating lyase GPY08_RS04130 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) GPY08_RS04135 PF01966 HD domain GPY08_RS04145 PF00939 Sodium:sulfate symporter transmembrane region GPY08_RS04170 PF01124 MAPEG family GPY08_RS04190 PF16671 Actin cross-linking domain GPY08_RS04190 PF04717 Type VI secretion system, phage-baseplate injector GPY08_RS04195 PF05638 Type VI secretion system effector, Hcp GPY08_RS04200 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GPY08_RS04200 PF02806 Alpha amylase, C-terminal all-beta domain GPY08_RS04200 PF00128 Alpha amylase, catalytic domain GPY08_RS04205 PF02446 4-alpha-glucanotransferase GPY08_RS04210 PF00343 Carbohydrate phosphorylase GPY08_RS04215 PF00196 Bacterial regulatory proteins, luxR family GPY08_RS04215 PF17874 MalT-like TPR region GPY08_RS04220 PF10928 Protein of unknown function (DUF2810) GPY08_RS04225 PF01040 UbiA prenyltransferase family GPY08_RS04230 PF03626 Prokaryotic Cytochrome C oxidase subunit IV GPY08_RS04235 PF00510 Cytochrome c oxidase subunit III GPY08_RS04240 PF00115 Cytochrome C and Quinol oxidase polypeptide I GPY08_RS04245 PF06481 COX Aromatic Rich Motif GPY08_RS04245 PF00116 Cytochrome C oxidase subunit II, periplasmic domain GPY08_RS04255 PF17200 Single Cache domain 2 GPY08_RS04255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY08_RS04255 PF00672 HAMP domain GPY08_RS04265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS04265 PF03466 LysR substrate binding domain GPY08_RS04275 PF01709 Transcriptional regulator GPY08_RS04300 PF13614 AAA domain GPY08_RS04300 PF18607 ParA helix turn helix domain GPY08_RS04305 PF02195 ParB-like nuclease domain GPY08_RS04305 PF08775 ParB family GPY08_RS04310 PF13416 Bacterial extracellular solute-binding protein GPY08_RS04315 PF13718 GNAT acetyltransferase 2 GPY08_RS04315 PF05127 Helicase GPY08_RS04325 PF00072 Response regulator receiver domain GPY08_RS04330 PF01584 CheW-like domain GPY08_RS04330 PF01627 Hpt domain GPY08_RS04330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY08_RS04330 PF02895 Signal transducing histidine kinase, homodimeric domain GPY08_RS04330 PF09078 CheY binding GPY08_RS04335 PF01584 CheW-like domain GPY08_RS04340 PF01584 CheW-like domain GPY08_RS04345 PF02203 Tar ligand binding domain homologue GPY08_RS04345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY08_RS04345 PF00672 HAMP domain GPY08_RS04350 PF03705 CheR methyltransferase, all-alpha domain GPY08_RS04350 PF01739 CheR methyltransferase, SAM binding domain GPY08_RS04355 PF03975 CheD chemotactic sensory transduction GPY08_RS04360 PF01339 CheB methylesterase GPY08_RS04360 PF00072 Response regulator receiver domain GPY08_RS04365 PF02743 Cache domain GPY08_RS04365 PF00672 HAMP domain GPY08_RS04365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY08_RS04385 PF00664 ABC transporter transmembrane region GPY08_RS04385 PF00005 ABC transporter GPY08_RS04385 PF03412 Peptidase C39 family GPY08_RS04425 PF12833 Helix-turn-helix domain GPY08_RS04430 PF00171 Aldehyde dehydrogenase family GPY08_RS04430 PF01619 Proline dehydrogenase GPY08_RS04430 PF14850 DNA-binding domain of Proline dehydrogenase GPY08_RS04430 PF18327 Proline utilization A proline dehydrogenase N-terminal domain GPY08_RS04440 PF00474 Sodium:solute symporter family GPY08_RS04445 PF00672 HAMP domain GPY08_RS04445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY08_RS04455 PF00171 Aldehyde dehydrogenase family GPY08_RS04460 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GPY08_RS04480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS04480 PF03466 LysR substrate binding domain GPY08_RS04485 PF08241 Methyltransferase domain GPY08_RS04495 PF00376 MerR family regulatory protein GPY08_RS04495 PF09278 MerR, DNA binding GPY08_RS04500 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) GPY08_RS04505 PF00266 Aminotransferase class-V GPY08_RS04510 PF01037 Lrp/AsnC ligand binding domain GPY08_RS04515 PF02447 GntP family permease GPY08_RS04520 PF01261 Xylose isomerase-like TIM barrel GPY08_RS04530 PF07005 Sugar-binding N-terminal domain GPY08_RS04530 PF17042 Nucleotide-binding C-terminal domain GPY08_RS04535 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GPY08_RS04535 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GPY08_RS04545 PF13426 PAS domain GPY08_RS04545 PF08447 PAS fold GPY08_RS04545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY08_RS04555 PF03466 LysR substrate binding domain GPY08_RS04555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS04560 PF13460 NAD(P)H-binding GPY08_RS04565 PF00893 Small Multidrug Resistance protein GPY08_RS04575 PF00857 Isochorismatase family GPY08_RS04580 PF12833 Helix-turn-helix domain GPY08_RS04595 PF03992 Antibiotic biosynthesis monooxygenase GPY08_RS04600 PF03733 Inner membrane component domain GPY08_RS04610 PF00392 Bacterial regulatory proteins, gntR family GPY08_RS04610 PF00155 Aminotransferase class I and II GPY08_RS04665 PF14579 Helix-hairpin-helix motif GPY08_RS04665 PF02811 PHP domain GPY08_RS04665 PF07733 Bacterial DNA polymerase III alpha NTPase domain GPY08_RS04665 PF00929 Exonuclease GPY08_RS04665 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GPY08_RS04685 PF00012 Hsp70 protein GPY08_RS04690 PF10437 Bacterial lipoate protein ligase C-terminus GPY08_RS04690 PF03099 Biotin/lipoate A/B protein ligase family GPY08_RS04700 PF03466 LysR substrate binding domain GPY08_RS04700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS04705 PF03806 AbgT putative transporter family GPY08_RS04720 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GPY08_RS04725 PF05068 Mannitol repressor GPY08_RS04730 PF01232 Mannitol dehydrogenase Rossmann domain GPY08_RS04730 PF08125 Mannitol dehydrogenase C-terminal domain GPY08_RS04735 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GPY08_RS04735 PF02378 Phosphotransferase system, EIIC GPY08_RS04735 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GPY08_RS04740 PF01551 Peptidase family M23 GPY08_RS04740 PF04225 Opacity-associated protein A LysM-like domain GPY08_RS04750 PF02225 PA domain GPY08_RS04750 PF04389 Peptidase family M28 GPY08_RS04755 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase GPY08_RS04775 PF03466 LysR substrate binding domain GPY08_RS04775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS04780 PF07969 Amidohydrolase family GPY08_RS04785 PF07681 DoxX GPY08_RS04790 PF06029 AlkA N-terminal domain GPY08_RS04790 PF00730 HhH-GPD superfamily base excision DNA repair protein GPY08_RS04795 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GPY08_RS04795 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GPY08_RS04810 PF00375 Sodium:dicarboxylate symporter family GPY08_RS04835 PF00561 alpha/beta hydrolase fold GPY08_RS04845 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GPY08_RS04845 PF00529 HlyD membrane-fusion protein of T1SS GPY08_RS04850 PF01047 MarR family GPY08_RS04860 PF02566 OsmC-like protein GPY08_RS04865 PF01047 MarR family GPY08_RS04870 PF01557 Fumarylacetoacetate (FAA) hydrolase family GPY08_RS04890 PF01810 LysE type translocator GPY08_RS04900 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GPY08_RS04905 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GPY08_RS04905 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GPY08_RS04905 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GPY08_RS04905 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GPY08_RS04910 PF00116 Cytochrome C oxidase subunit II, periplasmic domain GPY08_RS04910 PF02790 Cytochrome C oxidase subunit II, transmembrane domain GPY08_RS04915 PF00115 Cytochrome C and Quinol oxidase polypeptide I GPY08_RS04925 PF00510 Cytochrome c oxidase subunit III GPY08_RS04950 PF01040 UbiA prenyltransferase family GPY08_RS04955 PF12706 Beta-lactamase superfamily domain GPY08_RS04965 PF00793 DAHP synthetase I family GPY08_RS04970 PF01554 MatE GPY08_RS05015 PF00155 Aminotransferase class I and II GPY08_RS05015 PF00392 Bacterial regulatory proteins, gntR family GPY08_RS05020 PF00892 EamA-like transporter family GPY08_RS05025 PF07690 Major Facilitator Superfamily GPY08_RS05030 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GPY08_RS05035 PF02798 Glutathione S-transferase, N-terminal domain GPY08_RS05035 PF14497 Glutathione S-transferase, C-terminal domain GPY08_RS05045 PF01361 Tautomerase enzyme GPY08_RS05060 PF03466 LysR substrate binding domain GPY08_RS05060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS05080 PF05656 Protein of unknown function (DUF805) GPY08_RS05090 PF07977 FabA-like domain GPY08_RS05095 PF00291 Pyridoxal-phosphate dependent enzyme GPY08_RS05100 PF02627 Carboxymuconolactone decarboxylase family GPY08_RS05105 PF12833 Helix-turn-helix domain GPY08_RS05110 PF00391 PEP-utilising enzyme, mobile domain GPY08_RS05110 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GPY08_RS05110 PF02896 PEP-utilising enzyme, TIM barrel domain GPY08_RS05125 PF01070 FMN-dependent dehydrogenase GPY08_RS05130 PF02652 L-lactate permease GPY08_RS05135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS05135 PF03466 LysR substrate binding domain GPY08_RS05140 PF00005 ABC transporter GPY08_RS05140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GPY08_RS05150 PF05362 Lon protease (S16) C-terminal proteolytic domain GPY08_RS05150 PF13654 AAA domain GPY08_RS05155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY08_RS05155 PF00672 HAMP domain GPY08_RS05155 PF12729 Four helix bundle sensory module for signal transduction GPY08_RS05170 PF02254 TrkA-N domain GPY08_RS05170 PF02080 TrkA-C domain GPY08_RS05175 PF02386 Cation transport protein GPY08_RS05185 PF06865 Pyrimidine/purine nucleoside phosphorylase GPY08_RS05205 PF04717 Type VI secretion system, phage-baseplate injector GPY08_RS05205 PF16671 Actin cross-linking domain GPY08_RS05305 PF00512 His Kinase A (phospho-acceptor) domain GPY08_RS05305 PF00672 HAMP domain GPY08_RS05305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY08_RS05310 PF00072 Response regulator receiver domain GPY08_RS05310 PF00486 Transcriptional regulatory protein, C terminal GPY08_RS05315 PF05726 Pirin C-terminal cupin domain GPY08_RS05315 PF02678 Pirin GPY08_RS05325 PF00563 EAL domain GPY08_RS05325 PF00990 Diguanylate cyclase, GGDEF domain GPY08_RS05330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS05330 PF03466 LysR substrate binding domain GPY08_RS05350 PF00990 Diguanylate cyclase, GGDEF domain GPY08_RS05350 PF07694 5TMR of 5TMR-LYT GPY08_RS05370 PF00990 Diguanylate cyclase, GGDEF domain GPY08_RS05380 PF01047 MarR family GPY08_RS05385 PF04237 YjbR GPY08_RS05390 PF01584 CheW-like domain GPY08_RS05390 PF00072 Response regulator receiver domain GPY08_RS05410 PF14552 Tautomerase enzyme GPY08_RS05425 PF08502 LeuA allosteric (dimerisation) domain GPY08_RS05425 PF00682 HMGL-like GPY08_RS05435 PF00440 Bacterial regulatory proteins, tetR family GPY08_RS05440 PF00892 EamA-like transporter family GPY08_RS05445 PF01037 Lrp/AsnC ligand binding domain GPY08_RS05450 PF00196 Bacterial regulatory proteins, luxR family GPY08_RS05455 PF01906 Putative heavy-metal-binding GPY08_RS05460 PF14583 Oligogalacturonate lyase GPY08_RS05465 PF00474 Sodium:solute symporter family GPY08_RS05470 PF01554 MatE GPY08_RS05480 PF13416 Bacterial extracellular solute-binding protein GPY08_RS05485 PF03459 TOBE domain GPY08_RS05485 PF00005 ABC transporter GPY08_RS05485 PF17912 MalK OB fold domain GPY08_RS05490 PF00528 Binding-protein-dependent transport system inner membrane component GPY08_RS05495 PF00528 Binding-protein-dependent transport system inner membrane component GPY08_RS05505 PF13229 Right handed beta helix region GPY08_RS05515 PF01081 KDPG and KHG aldolase GPY08_RS05520 PF00294 pfkB family carbohydrate kinase GPY08_RS05535 PF07883 Cupin domain GPY08_RS05540 PF10688 Bacterial inner membrane protein GPY08_RS05550 PF09339 IclR helix-turn-helix domain GPY08_RS05550 PF01614 Bacterial transcriptional regulator GPY08_RS05555 PF00571 CBS domain GPY08_RS05575 PF13302 Acetyltransferase (GNAT) domain GPY08_RS05585 PF00392 Bacterial regulatory proteins, gntR family GPY08_RS05585 PF00155 Aminotransferase class I and II GPY08_RS05595 PF03783 Curli production assembly/transport component CsgG GPY08_RS05600 PF10614 Type VIII secretion system (T8SS), CsgF protein GPY08_RS05625 PF00005 ABC transporter GPY08_RS05625 PF08402 TOBE domain GPY08_RS05630 PF01547 Bacterial extracellular solute-binding protein GPY08_RS05635 PF00528 Binding-protein-dependent transport system inner membrane component GPY08_RS05635 PF14785 Maltose transport system permease protein MalF P2 domain GPY08_RS05640 PF00528 Binding-protein-dependent transport system inner membrane component GPY08_RS05660 PF03472 Autoinducer binding domain GPY08_RS05660 PF00196 Bacterial regulatory proteins, luxR family GPY08_RS05665 PF00455 DeoR C terminal sensor domain GPY08_RS05665 PF08220 DeoR-like helix-turn-helix domain GPY08_RS05685 PF05661 Protein of unknown function (DUF808) GPY08_RS05690 PF05958 tRNA (Uracil-5-)-methyltransferase GPY08_RS05695 PF01979 Amidohydrolase family GPY08_RS05700 PF03476 MOSC N-terminal beta barrel domain GPY08_RS05700 PF00111 2Fe-2S iron-sulfur cluster binding domain GPY08_RS05700 PF03473 MOSC domain GPY08_RS05735 PF01032 FecCD transport family GPY08_RS05745 PF02472 Biopolymer transport protein ExbD/TolR GPY08_RS05750 PF01618 MotA/TolQ/ExbB proton channel family GPY08_RS05755 PF03544 Gram-negative bacterial TonB protein C-terminal GPY08_RS05760 PF06228 Haem utilisation ChuX/HutX GPY08_RS05765 PF01243 Pyridoxamine 5'-phosphate oxidase GPY08_RS05775 PF13520 Amino acid permease GPY08_RS05780 PF13404 AsnC-type helix-turn-helix domain GPY08_RS05780 PF01037 Lrp/AsnC ligand binding domain GPY08_RS05810 PF00175 Oxidoreductase NAD-binding domain GPY08_RS05810 PF00970 Oxidoreductase FAD-binding domain GPY08_RS05810 PF00111 2Fe-2S iron-sulfur cluster binding domain GPY08_RS05815 PF00563 EAL domain GPY08_RS05815 PF12792 CSS motif domain associated with EAL GPY08_RS05825 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GPY08_RS05825 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GPY08_RS05840 PF00512 His Kinase A (phospho-acceptor) domain GPY08_RS05840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY08_RS05840 PF00672 HAMP domain GPY08_RS05840 PF01627 Hpt domain GPY08_RS05840 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GPY08_RS05840 PF00072 Response regulator receiver domain GPY08_RS05845 PF00990 Diguanylate cyclase, GGDEF domain GPY08_RS05845 PF00563 EAL domain GPY08_RS05845 PF03707 Bacterial signalling protein N terminal repeat GPY08_RS05850 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GPY08_RS05860 PF02566 OsmC-like protein GPY08_RS05870 PF00132 Bacterial transferase hexapeptide (six repeats) GPY08_RS05870 PF14602 Hexapeptide repeat of succinyl-transferase GPY08_RS05870 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal GPY08_RS05875 PF00892 EamA-like transporter family GPY08_RS05890 PF03466 LysR substrate binding domain GPY08_RS05890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS05905 PF00501 AMP-binding enzyme GPY08_RS05925 PF00072 Response regulator receiver domain GPY08_RS05925 PF00486 Transcriptional regulatory protein, C terminal GPY08_RS05930 PF08521 Two-component sensor kinase N-terminal GPY08_RS05930 PF00512 His Kinase A (phospho-acceptor) domain GPY08_RS05930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY08_RS05935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS05935 PF03466 LysR substrate binding domain GPY08_RS05940 PF00501 AMP-binding enzyme GPY08_RS05940 PF13193 AMP-binding enzyme C-terminal domain GPY08_RS05945 PF00351 Biopterin-dependent aromatic amino acid hydroxylase GPY08_RS05950 PF01329 Pterin 4 alpha carbinolamine dehydratase GPY08_RS05955 PF01554 MatE GPY08_RS05965 PF03741 Integral membrane protein TerC family GPY08_RS05975 PF00583 Acetyltransferase (GNAT) family GPY08_RS05980 PF00202 Aminotransferase class-III GPY08_RS05985 PF06339 Ectoine synthase GPY08_RS06005 PF03466 LysR substrate binding domain GPY08_RS06005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS06015 PF11849 Domain of unknown function (DUF3369) GPY08_RS06020 PF03707 Bacterial signalling protein N terminal repeat GPY08_RS06020 PF00990 Diguanylate cyclase, GGDEF domain GPY08_RS06020 PF00563 EAL domain GPY08_RS06025 PF00490 Delta-aminolevulinic acid dehydratase GPY08_RS06035 PF00118 TCP-1/cpn60 chaperonin family GPY08_RS06040 PF00166 Chaperonin 10 Kd subunit GPY08_RS06045 PF03448 MgtE intracellular N domain GPY08_RS06045 PF01769 Divalent cation transporter GPY08_RS06045 PF00571 CBS domain GPY08_RS06055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY08_RS06055 PF00672 HAMP domain GPY08_RS06070 PF00528 Binding-protein-dependent transport system inner membrane component GPY08_RS06075 PF00571 CBS domain GPY08_RS06075 PF00005 ABC transporter GPY08_RS06085 PF17944 Arginine decarboxylase C-terminal helical extension GPY08_RS06085 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GPY08_RS06085 PF17810 Arginine decarboxylase helical bundle domain GPY08_RS06095 PF01037 Lrp/AsnC ligand binding domain GPY08_RS06100 PF01053 Cys/Met metabolism PLP-dependent enzyme GPY08_RS06105 PF00497 Bacterial extracellular solute-binding proteins, family 3 GPY08_RS06110 PF00528 Binding-protein-dependent transport system inner membrane component GPY08_RS06115 PF00005 ABC transporter GPY08_RS06120 PF00768 D-alanyl-D-alanine carboxypeptidase GPY08_RS06120 PF07943 Penicillin-binding protein 5, C-terminal domain GPY08_RS06145 PF00194 Eukaryotic-type carbonic anhydrase GPY08_RS06155 PF00119 ATP synthase A chain GPY08_RS06160 PF00137 ATP synthase subunit C GPY08_RS06165 PF00430 ATP synthase B/B' CF(0) GPY08_RS06170 PF00213 ATP synthase delta (OSCP) subunit GPY08_RS06175 PF02874 ATP synthase alpha/beta family, beta-barrel domain GPY08_RS06175 PF00306 ATP synthase alpha/beta chain, C terminal domain GPY08_RS06175 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GPY08_RS06185 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GPY08_RS06185 PF02874 ATP synthase alpha/beta family, beta-barrel domain GPY08_RS06195 PF03060 Nitronate monooxygenase GPY08_RS06200 PF01810 LysE type translocator GPY08_RS06205 PF00270 DEAD/DEAH box helicase GPY08_RS06205 PF00271 Helicase conserved C-terminal domain GPY08_RS06210 PF00158 Sigma-54 interaction domain GPY08_RS06210 PF02954 Bacterial regulatory protein, Fis family GPY08_RS06210 PF00072 Response regulator receiver domain GPY08_RS06215 PF00512 His Kinase A (phospho-acceptor) domain GPY08_RS06215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY08_RS06220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY08_RS06220 PF00672 HAMP domain GPY08_RS06230 PF08267 Cobalamin-independent synthase, N-terminal domain GPY08_RS06230 PF01717 Cobalamin-independent synthase, Catalytic domain GPY08_RS06235 PF06826 Predicted Permease Membrane Region GPY08_RS06235 PF02080 TrkA-C domain GPY08_RS06240 PF00132 Bacterial transferase hexapeptide (six repeats) GPY08_RS06245 PF08546 Ketopantoate reductase PanE/ApbA C terminal GPY08_RS06245 PF02558 Ketopantoate reductase PanE/ApbA GPY08_RS06265 PF01810 LysE type translocator GPY08_RS06300 PF09350 Domain of unknown function (DUF1992) GPY08_RS06310 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) GPY08_RS06315 PF02253 Phospholipase A1 GPY08_RS06330 PF02347 Glycine cleavage system P-protein GPY08_RS06335 PF01597 Glycine cleavage H-protein GPY08_RS06340 PF00464 Serine hydroxymethyltransferase GPY08_RS06350 PF08669 Glycine cleavage T-protein C-terminal barrel domain GPY08_RS06350 PF01571 Aminomethyltransferase folate-binding domain GPY08_RS06355 PF00089 Trypsin GPY08_RS06360 PF00990 Diguanylate cyclase, GGDEF domain GPY08_RS06360 PF17158 Membrane-associated sensor, integral membrane domain GPY08_RS06365 PF00563 EAL domain GPY08_RS06365 PF08448 PAS fold GPY08_RS06365 PF08447 PAS fold GPY08_RS06365 PF00990 Diguanylate cyclase, GGDEF domain GPY08_RS06370 PF00294 pfkB family carbohydrate kinase GPY08_RS06385 PF13419 Haloacid dehalogenase-like hydrolase GPY08_RS06405 PF00684 DnaJ central domain GPY08_RS06405 PF00226 DnaJ domain GPY08_RS06405 PF01556 DnaJ C terminal domain GPY08_RS06415 PF00990 Diguanylate cyclase, GGDEF domain GPY08_RS06415 PF00498 FHA domain GPY08_RS06415 PF00563 EAL domain GPY08_RS06420 PF07055 Enoyl reductase FAD binding domain GPY08_RS06420 PF12241 Trans-2-enoyl-CoA reductase catalytic region GPY08_RS06420 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase GPY08_RS06425 PF13472 GDSL-like Lipase/Acylhydrolase family GPY08_RS06430 PF00005 ABC transporter GPY08_RS06445 PF02626 Carboxyltransferase domain, subdomain A and B GPY08_RS06465 PF16363 GDP-mannose 4,6 dehydratase GPY08_RS06470 PF12729 Four helix bundle sensory module for signal transduction GPY08_RS06470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY08_RS06470 PF00672 HAMP domain GPY08_RS06475 PF03222 Tryptophan/tyrosine permease family GPY08_RS06480 PF04336 Acyl carrier protein phosphodiesterase GPY08_RS06485 PF00271 Helicase conserved C-terminal domain GPY08_RS06485 PF00270 DEAD/DEAH box helicase GPY08_RS06490 PF08361 MAATS-type transcriptional repressor, C-terminal region GPY08_RS06490 PF00440 Bacterial regulatory proteins, tetR family GPY08_RS06495 PF00034 Cytochrome c GPY08_RS06500 PF01212 Beta-eliminating lyase GPY08_RS06505 PF00293 NUDIX domain GPY08_RS06510 PF12592 Protein of unknown function (DUF3763) GPY08_RS06510 PF17868 AAA lid domain GPY08_RS06510 PF07728 AAA domain (dynein-related subfamily) GPY08_RS06515 PF05762 VWA domain containing CoxE-like protein GPY08_RS06530 PF00593 TonB dependent receptor GPY08_RS06530 PF07660 Secretin and TonB N terminus short domain GPY08_RS06530 PF07715 TonB-dependent Receptor Plug Domain GPY08_RS06545 PF12729 Four helix bundle sensory module for signal transduction GPY08_RS06545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY08_RS06545 PF00672 HAMP domain GPY08_RS06555 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase GPY08_RS06565 PF00535 Glycosyl transferase family 2 GPY08_RS06575 PF03466 LysR substrate binding domain GPY08_RS06575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS06580 PF00892 EamA-like transporter family GPY08_RS06585 PF02311 AraC-like ligand binding domain GPY08_RS06585 PF12833 Helix-turn-helix domain GPY08_RS06610 PF01145 SPFH domain / Band 7 family GPY08_RS06610 PF16200 C-terminal region of band_7 GPY08_RS06620 PF00296 Luciferase-like monooxygenase GPY08_RS06625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS06625 PF03466 LysR substrate binding domain GPY08_RS06635 PF02634 FdhD/NarQ family GPY08_RS06640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS06640 PF03466 LysR substrate binding domain GPY08_RS06645 PF01062 Bestrophin, RFP-TM, chloride channel GPY08_RS06650 PF00384 Molybdopterin oxidoreductase GPY08_RS06655 PF01654 Cytochrome bd terminal oxidase subunit I GPY08_RS06665 PF03577 Peptidase family C69 GPY08_RS06675 PF08125 Mannitol dehydrogenase C-terminal domain GPY08_RS06675 PF01232 Mannitol dehydrogenase Rossmann domain GPY08_RS06680 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GPY08_RS06680 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GPY08_RS06685 PF07690 Major Facilitator Superfamily GPY08_RS06690 PF13419 Haloacid dehalogenase-like hydrolase GPY08_RS06695 PF00881 Nitroreductase family GPY08_RS06700 PF03466 LysR substrate binding domain GPY08_RS06700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS06705 PF01168 Alanine racemase, N-terminal domain GPY08_RS06705 PF00842 Alanine racemase, C-terminal domain GPY08_RS06710 PF00672 HAMP domain GPY08_RS06710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY08_RS06735 PF02028 BCCT, betaine/carnitine/choline family transporter GPY08_RS06770 PF13806 Rieske-like [2Fe-2S] domain GPY08_RS06775 PF01226 Formate/nitrite transporter GPY08_RS06780 PF10414 Sirohaem synthase dimerisation region GPY08_RS06780 PF14824 Sirohaem biosynthesis protein central GPY08_RS06780 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GPY08_RS06800 PF11756 Nitrous oxide-stimulated promoter GPY08_RS06805 PF07690 Major Facilitator Superfamily GPY08_RS06810 PF00085 Thioredoxin GPY08_RS06815 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GPY08_RS06815 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GPY08_RS06820 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GPY08_RS06825 PF00873 AcrB/AcrD/AcrF family GPY08_RS06830 PF02397 Bacterial sugar transferase GPY08_RS06840 PF02563 Polysaccharide biosynthesis/export protein GPY08_RS06840 PF18412 Outer-membrane lipoprotein Wza C-terminal domain GPY08_RS06840 PF10531 SLBB domain GPY08_RS06865 PF13439 Glycosyltransferase Family 4 GPY08_RS06865 PF00534 Glycosyl transferases group 1 GPY08_RS06880 PF02449 Beta-galactosidase GPY08_RS06880 PF08532 Beta-galactosidase trimerisation domain GPY08_RS06880 PF08533 Beta-galactosidase C-terminal domain GPY08_RS06885 PF13183 4Fe-4S dicluster domain GPY08_RS06885 PF02754 Cysteine-rich domain GPY08_RS06890 PF00890 FAD binding domain GPY08_RS06895 PF04324 BFD-like [2Fe-2S] binding domain GPY08_RS06895 PF01266 FAD dependent oxidoreductase GPY08_RS06900 PF00230 Major intrinsic protein GPY08_RS06905 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GPY08_RS06905 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GPY08_RS06910 PF10688 Bacterial inner membrane protein GPY08_RS06935 PF02899 Phage integrase, N-terminal SAM-like domain GPY08_RS06935 PF00589 Phage integrase family GPY08_RS06940 PF04363 Protein of unknown function (DUF496) GPY08_RS06950 PF04337 Protein of unknown function, DUF480 GPY08_RS06955 PF01541 GIY-YIG catalytic domain GPY08_RS06965 PF13407 Periplasmic binding protein domain GPY08_RS06970 PF09308 LuxQ, periplasmic GPY08_RS06970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY08_RS06970 PF00072 Response regulator receiver domain GPY08_RS06970 PF00512 His Kinase A (phospho-acceptor) domain GPY08_RS06990 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GPY08_RS06990 PF07685 CobB/CobQ-like glutamine amidotransferase domain GPY08_RS07000 PF00528 Binding-protein-dependent transport system inner membrane component GPY08_RS07005 PF03459 TOBE domain GPY08_RS07005 PF00005 ABC transporter GPY08_RS07025 PF00962 Adenosine/AMP deaminase GPY08_RS07030 PF03707 Bacterial signalling protein N terminal repeat GPY08_RS07030 PF00990 Diguanylate cyclase, GGDEF domain GPY08_RS07030 PF00563 EAL domain GPY08_RS07030 PF13188 PAS domain GPY08_RS07035 PF00072 Response regulator receiver domain GPY08_RS07035 PF00158 Sigma-54 interaction domain GPY08_RS07035 PF02954 Bacterial regulatory protein, Fis family GPY08_RS07040 PF00989 PAS fold GPY08_RS07040 PF00512 His Kinase A (phospho-acceptor) domain GPY08_RS07040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY08_RS07050 PF03951 Glutamine synthetase, beta-Grasp domain GPY08_RS07050 PF00120 Glutamine synthetase, catalytic domain GPY08_RS07070 PF03631 Virulence factor BrkB GPY08_RS07075 PF02580 D-Tyr-tRNA(Tyr) deacylase GPY08_RS07080 PF00583 Acetyltransferase (GNAT) family GPY08_RS07080 PF09500 Putative thioesterase (yiiD_Cterm) GPY08_RS07085 PF05170 AsmA family GPY08_RS07090 PF01293 Phosphoenolpyruvate carboxykinase GPY08_RS07095 PF01430 Hsp33 protein GPY08_RS07105 PF11356 Type II secretion system protein C GPY08_RS07110 PF00263 Bacterial type II and III secretion system protein GPY08_RS07110 PF03958 Bacterial type II/III secretion system short domain GPY08_RS07115 PF00437 Type II/IV secretion system protein GPY08_RS07120 PF00482 Type II secretion system (T2SS), protein F GPY08_RS07125 PF07963 Prokaryotic N-terminal methylation motif GPY08_RS07125 PF08334 Type II secretion system (T2SS), protein G GPY08_RS07130 PF12019 Type II transport protein GspH GPY08_RS07135 PF02501 Type II secretion system (T2SS), protein I GPY08_RS07135 PF07963 Prokaryotic N-terminal methylation motif GPY08_RS07140 PF07963 Prokaryotic N-terminal methylation motif GPY08_RS07140 PF11612 Type II secretion system (T2SS), protein J GPY08_RS07145 PF03934 Type II secretion system (T2SS), protein K GPY08_RS07150 PF12693 GspL periplasmic domain GPY08_RS07150 PF05134 Type II secretion system (T2SS), protein L GPY08_RS07155 PF04612 Type II secretion system (T2SS), protein M GPY08_RS07160 PF01203 Type II secretion system (T2SS), protein N GPY08_RS07165 PF00459 Inositol monophosphatase family GPY08_RS07170 PF00293 NUDIX domain GPY08_RS07175 PF01521 Iron-sulphur cluster biosynthesis GPY08_RS07175 PF01106 NifU-like domain GPY08_RS07180 PF00156 Phosphoribosyl transferase domain GPY08_RS07185 PF00561 alpha/beta hydrolase fold GPY08_RS07195 PF09371 Tex-like protein N-terminal domain GPY08_RS07195 PF16921 Tex protein YqgF-like domain GPY08_RS07195 PF17674 HHH domain GPY08_RS07195 PF00575 S1 RNA binding domain GPY08_RS07205 PF01272 Transcription elongation factor, GreA/GreB, C-term GPY08_RS07205 PF03449 Transcription elongation factor, N-terminal GPY08_RS07210 PF00356 Bacterial regulatory proteins, lacI family GPY08_RS07210 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GPY08_RS07215 PF00920 Dehydratase family GPY08_RS07220 PF01202 Shikimate kinase GPY08_RS07225 PF02447 GntP family permease GPY08_RS07235 PF00486 Transcriptional regulatory protein, C terminal GPY08_RS07235 PF00072 Response regulator receiver domain GPY08_RS07240 PF00672 HAMP domain GPY08_RS07240 PF00512 His Kinase A (phospho-acceptor) domain GPY08_RS07240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY08_RS07245 PF00860 Permease family GPY08_RS07250 PF00271 Helicase conserved C-terminal domain GPY08_RS07250 PF00270 DEAD/DEAH box helicase GPY08_RS07250 PF17191 RecG wedge domain GPY08_RS07255 PF12105 SpoU, rRNA methylase, C-terminal GPY08_RS07255 PF00588 SpoU rRNA Methylase family GPY08_RS07260 PF04607 Region found in RelA / SpoT proteins GPY08_RS07260 PF02824 TGS domain GPY08_RS07260 PF13291 ACT domain GPY08_RS07265 PF01192 RNA polymerase Rpb6 GPY08_RS07270 PF00625 Guanylate kinase GPY08_RS07275 PF02592 Putative vitamin uptake transporter GPY08_RS07290 PF02080 TrkA-C domain GPY08_RS07290 PF00999 Sodium/hydrogen exchanger family GPY08_RS07290 PF03471 Transporter associated domain GPY08_RS07295 PF00072 Response regulator receiver domain GPY08_RS07295 PF00196 Bacterial regulatory proteins, luxR family GPY08_RS07300 PF11412 Disulphide bond corrector protein DsbC GPY08_RS07300 PF02683 Cytochrome C biogenesis protein transmembrane region GPY08_RS07305 PF02863 Arginine repressor, C-terminal domain GPY08_RS07305 PF01316 Arginine repressor, DNA binding domain GPY08_RS07310 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain GPY08_RS07310 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain GPY08_RS07320 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GPY08_RS07320 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GPY08_RS07325 PF00696 Amino acid kinase family GPY08_RS07335 PF03606 C4-dicarboxylate anaerobic carrier GPY08_RS07340 PF03605 Anaerobic c4-dicarboxylate membrane transporter GPY08_RS07345 PF00206 Lyase GPY08_RS07345 PF10415 Fumarase C C-terminus GPY08_RS07350 PF00990 Diguanylate cyclase, GGDEF domain GPY08_RS07350 PF17158 Membrane-associated sensor, integral membrane domain GPY08_RS07355 PF04186 FxsA cytoplasmic membrane protein GPY08_RS07360 PF00588 SpoU rRNA Methylase family GPY08_RS07370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY08_RS07370 PF16527 Two-component sensor protein CpxA, periplasmic domain GPY08_RS07370 PF00512 His Kinase A (phospho-acceptor) domain GPY08_RS07370 PF00672 HAMP domain GPY08_RS07375 PF00072 Response regulator receiver domain GPY08_RS07375 PF00486 Transcriptional regulatory protein, C terminal GPY08_RS07385 PF01545 Cation efflux family GPY08_RS07385 PF16916 Dimerisation domain of Zinc Transporter GPY08_RS07390 PF00365 Phosphofructokinase GPY08_RS07395 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded GPY08_RS07405 PF02219 Methylenetetrahydrofolate reductase GPY08_RS07410 PF00696 Amino acid kinase family GPY08_RS07410 PF03447 Homoserine dehydrogenase, NAD binding domain GPY08_RS07410 PF00742 Homoserine dehydrogenase GPY08_RS07415 PF01053 Cys/Met metabolism PLP-dependent enzyme GPY08_RS07420 PF01340 Met Apo-repressor, MetJ GPY08_RS07425 PF00390 Malic enzyme, N-terminal domain GPY08_RS07425 PF03949 Malic enzyme, NAD binding domain GPY08_RS07430 PF01197 Ribosomal protein L31 GPY08_RS07435 PF18319 PriA DNA helicase Cys-rich region (CRR) domain GPY08_RS07435 PF18074 Primosomal protein N C-terminal domain GPY08_RS07435 PF17764 3′ DNA-binding domain (3′BD) GPY08_RS07435 PF00271 Helicase conserved C-terminal domain GPY08_RS07435 PF00270 DEAD/DEAH box helicase GPY08_RS07440 PF00356 Bacterial regulatory proteins, lacI family GPY08_RS07450 PF00227 Proteasome subunit GPY08_RS07460 PF01040 UbiA prenyltransferase family GPY08_RS07465 PF03737 Aldolase/RraA GPY08_RS07475 PF00121 Triosephosphate isomerase GPY08_RS07500 PF00166 Chaperonin 10 Kd subunit GPY08_RS07505 PF00118 TCP-1/cpn60 chaperonin family GPY08_RS07510 PF00005 ABC transporter GPY08_RS07525 PF04055 Radical SAM superfamily GPY08_RS07530 PF09285 Elongation factor P, C-terminal GPY08_RS07530 PF08207 Elongation factor P (EF-P) KOW-like domain GPY08_RS07530 PF01132 Elongation factor P (EF-P) OB domain GPY08_RS07535 PF02313 Fumarate reductase subunit D GPY08_RS07540 PF02300 Fumarate reductase subunit C GPY08_RS07545 PF13183 4Fe-4S dicluster domain GPY08_RS07545 PF13085 2Fe-2S iron-sulfur cluster binding domain GPY08_RS07550 PF02910 Fumarate reductase flavoprotein C-term GPY08_RS07550 PF00890 FAD binding domain GPY08_RS07555 PF00152 tRNA synthetases class II (D, K and N) GPY08_RS07560 PF00581 Rhodanese-like domain GPY08_RS07565 PF02556 Preprotein translocase subunit SecB GPY08_RS07570 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus GPY08_RS07570 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GPY08_RS07575 PF00132 Bacterial transferase hexapeptide (six repeats) GPY08_RS07575 PF06426 Serine acetyltransferase, N-terminal GPY08_RS07580 PF03551 Transcriptional regulator PadR-like family GPY08_RS07580 PF10400 Virulence activator alpha C-term GPY08_RS07585 PF00311 Phosphoenolpyruvate carboxylase GPY08_RS07590 PF01546 Peptidase family M20/M25/M40 GPY08_RS07590 PF07687 Peptidase dimerisation domain GPY08_RS07595 PF01118 Semialdehyde dehydrogenase, NAD binding domain GPY08_RS07595 PF02774 Semialdehyde dehydrogenase, dimerisation domain GPY08_RS07600 PF00696 Amino acid kinase family GPY08_RS07605 PF00764 Arginosuccinate synthase GPY08_RS07610 PF00206 Lyase GPY08_RS07610 PF14698 Argininosuccinate lyase C-terminal GPY08_RS07610 PF00583 Acetyltransferase (GNAT) family GPY08_RS07620 PF00462 Glutaredoxin GPY08_RS07620 PF08534 Redoxin GPY08_RS07625 PF03466 LysR substrate binding domain GPY08_RS07625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS07630 PF17092 Penicillin-binding protein OB-like domain GPY08_RS07630 PF00905 Penicillin binding protein transpeptidase domain GPY08_RS07630 PF00912 Transglycosylase GPY08_RS07660 PF01202 Shikimate kinase GPY08_RS07665 PF01761 3-dehydroquinate synthase GPY08_RS07685 PF13419 Haloacid dehalogenase-like hydrolase GPY08_RS07690 PF00579 tRNA synthetases class I (W and Y) GPY08_RS07710 PF00202 Aminotransferase class-III GPY08_RS07715 PF04958 Arginine N-succinyltransferase beta subunit GPY08_RS07720 PF00171 Aldehyde dehydrogenase family GPY08_RS07730 PF13545 Crp-like helix-turn-helix domain GPY08_RS07730 PF00027 Cyclic nucleotide-binding domain GPY08_RS07735 PF00485 Phosphoribulokinase / Uridine kinase family GPY08_RS07740 PF06794 Uncharacterised protein family (UPF0270) GPY08_RS07755 PF12848 ABC transporter GPY08_RS07755 PF00005 ABC transporter GPY08_RS07760 PF02525 Flavodoxin-like fold GPY08_RS07770 PF09526 Probable metal-binding protein (DUF2387) GPY08_RS07775 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GPY08_RS07780 PF01112 Asparaginase GPY08_RS07785 PF00709 Adenylosuccinate synthetase GPY08_RS07790 PF08238 Sel1 repeat GPY08_RS07795 PF11893 Domain of unknown function (DUF3413) GPY08_RS07795 PF00884 Sulfatase GPY08_RS07800 PF00773 RNB domain GPY08_RS07800 PF17876 Cold shock domain GPY08_RS07800 PF08461 Ribonuclease R winged-helix domain GPY08_RS07800 PF08206 Ribonuclease B OB domain GPY08_RS07800 PF00575 S1 RNA binding domain GPY08_RS07805 PF08032 RNA 2'-O ribose methyltransferase substrate binding GPY08_RS07805 PF00588 SpoU rRNA Methylase family GPY08_RS07810 PF00338 Ribosomal protein S10p/S20e GPY08_RS07815 PF00297 Ribosomal protein L3 GPY08_RS07820 PF00573 Ribosomal protein L4/L1 family GPY08_RS07825 PF00276 Ribosomal protein L23 GPY08_RS07830 PF03947 Ribosomal Proteins L2, C-terminal domain GPY08_RS07830 PF00181 Ribosomal Proteins L2, RNA binding domain GPY08_RS07835 PF00203 Ribosomal protein S19 GPY08_RS07840 PF00237 Ribosomal protein L22p/L17e GPY08_RS07845 PF07650 KH domain GPY08_RS07845 PF00189 Ribosomal protein S3, C-terminal domain GPY08_RS07850 PF00252 Ribosomal protein L16p/L10e GPY08_RS07855 PF00831 Ribosomal L29 protein GPY08_RS07860 PF00366 Ribosomal protein S17 GPY08_RS07865 PF00238 Ribosomal protein L14p/L23e GPY08_RS07870 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 GPY08_RS07870 PF00467 KOW motif GPY08_RS07875 PF00281 Ribosomal protein L5 GPY08_RS07875 PF00673 ribosomal L5P family C-terminus GPY08_RS07880 PF00253 Ribosomal protein S14p/S29e GPY08_RS07885 PF00410 Ribosomal protein S8 GPY08_RS07890 PF00347 Ribosomal protein L6 GPY08_RS07895 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast GPY08_RS07900 PF00333 Ribosomal protein S5, N-terminal domain GPY08_RS07900 PF03719 Ribosomal protein S5, C-terminal domain GPY08_RS07905 PF00327 Ribosomal protein L30p/L7e GPY08_RS07915 PF00344 SecY translocase GPY08_RS07920 PF00444 Ribosomal protein L36 GPY08_RS07925 PF00416 Ribosomal protein S13/S18 GPY08_RS07930 PF00411 Ribosomal protein S11 GPY08_RS07935 PF00163 Ribosomal protein S4/S9 N-terminal domain GPY08_RS07935 PF01479 S4 domain GPY08_RS07940 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain GPY08_RS07940 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain GPY08_RS07940 PF01000 RNA polymerase Rpb3/RpoA insert domain GPY08_RS07945 PF01196 Ribosomal protein L17 GPY08_RS07955 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GPY08_RS07955 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GPY08_RS07960 PF08525 Opacity-associated protein A N-terminal motif GPY08_RS07960 PF04225 Opacity-associated protein A LysM-like domain GPY08_RS07970 PF13673 Acetyltransferase (GNAT) domain GPY08_RS07975 PF00271 Helicase conserved C-terminal domain GPY08_RS07975 PF00270 DEAD/DEAH box helicase GPY08_RS07975 PF03880 DbpA RNA binding domain GPY08_RS07985 PF02872 5'-nucleotidase, C-terminal domain GPY08_RS07985 PF00149 Calcineurin-like phosphoesterase GPY08_RS07995 PF01507 Phosphoadenosine phosphosulfate reductase family GPY08_RS08000 PF00009 Elongation factor Tu GTP binding domain GPY08_RS08005 PF02080 TrkA-C domain GPY08_RS08005 PF03600 Citrate transporter GPY08_RS08030 PF00005 ABC transporter GPY08_RS08030 PF02687 FtsX-like permease family GPY08_RS08030 PF12704 MacB-like periplasmic core domain GPY08_RS08040 PF10795 Protein of unknown function (DUF2607) GPY08_RS08045 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) GPY08_RS08050 PF01625 Peptide methionine sulfoxide reductase GPY08_RS08055 PF07244 Surface antigen variable number repeat GPY08_RS08055 PF17243 POTRA domain TamA domain 1 GPY08_RS08055 PF01103 Surface antigen GPY08_RS08065 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like GPY08_RS08075 PF00719 Inorganic pyrophosphatase GPY08_RS08080 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain GPY08_RS08085 PF01225 Mur ligase family, catalytic domain GPY08_RS08085 PF02875 Mur ligase family, glutamate ligase domain GPY08_RS08085 PF08245 Mur ligase middle domain GPY08_RS08090 PF02441 Flavoprotein GPY08_RS08100 PF00528 Binding-protein-dependent transport system inner membrane component GPY08_RS08105 PF00005 ABC transporter GPY08_RS08110 PF04751 Protein of unknown function (DUF615) GPY08_RS08120 PF00571 CBS domain GPY08_RS08120 PF01769 Divalent cation transporter GPY08_RS08120 PF03448 MgtE intracellular N domain GPY08_RS08125 PF00381 PTS HPr component phosphorylation site GPY08_RS08130 PF03668 P-loop ATPase protein family GPY08_RS08135 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GPY08_RS08140 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein GPY08_RS08150 PF00005 ABC transporter GPY08_RS08150 PF12399 Branched-chain amino acid ATP-binding cassette transporter GPY08_RS08155 PF03968 OstA-like protein GPY08_RS08175 PF01699 Sodium/calcium exchanger protein GPY08_RS08180 PF00005 ABC transporter GPY08_RS08185 PF02405 Permease MlaE GPY08_RS08190 PF02470 MlaD protein GPY08_RS08195 PF05494 MlaC protein GPY08_RS08200 PF13466 STAS domain GPY08_RS08205 PF01722 BolA-like protein GPY08_RS08220 PF01042 Endoribonuclease L-PSP GPY08_RS08225 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain GPY08_RS08225 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain GPY08_RS08230 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GPY08_RS08230 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GPY08_RS08235 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GPY08_RS08235 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GPY08_RS08240 PF13638 PIN domain GPY08_RS08240 PF02562 PhoH-like protein GPY08_RS08250 PF12137 RNA polymerase recycling family C-terminal GPY08_RS08250 PF00271 Helicase conserved C-terminal domain GPY08_RS08250 PF18339 RapA N-terminal Tudor like domain 1 GPY08_RS08250 PF00176 SNF2 family N-terminal domain GPY08_RS08250 PF18337 RapA N-terminal Tudor like domain GPY08_RS08260 PF00849 RNA pseudouridylate synthase GPY08_RS08265 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GPY08_RS08265 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GPY08_RS08270 PF00133 tRNA synthetases class I (I, L, M and V) GPY08_RS08270 PF08264 Anticodon-binding domain of tRNA GPY08_RS08270 PF10458 Valyl tRNA synthetase tRNA binding arm GPY08_RS08280 PF00883 Cytosol aminopeptidase family, catalytic domain GPY08_RS08280 PF02789 Cytosol aminopeptidase family, N-terminal domain GPY08_RS08285 PF03739 Lipopolysaccharide export system permease LptF/LptG GPY08_RS08290 PF03739 Lipopolysaccharide export system permease LptF/LptG GPY08_RS08300 PF07694 5TMR of 5TMR-LYT GPY08_RS08300 PF00990 Diguanylate cyclase, GGDEF domain GPY08_RS08320 PF00990 Diguanylate cyclase, GGDEF domain GPY08_RS08320 PF01590 GAF domain GPY08_RS08320 PF00989 PAS fold GPY08_RS08320 PF00563 EAL domain GPY08_RS08330 PF00072 Response regulator receiver domain GPY08_RS08380 PF00330 Aconitase family (aconitate hydratase) GPY08_RS08385 PF00180 Isocitrate/isopropylmalate dehydrogenase GPY08_RS08390 PF00682 HMGL-like GPY08_RS08390 PF08502 LeuA allosteric (dimerisation) domain GPY08_RS08400 PF01569 PAP2 superfamily GPY08_RS08410 PF03466 LysR substrate binding domain GPY08_RS08410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS08415 PF00501 AMP-binding enzyme GPY08_RS08420 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GPY08_RS08420 PF00205 Thiamine pyrophosphate enzyme, central domain GPY08_RS08420 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GPY08_RS08425 PF10369 Small subunit of acetolactate synthase GPY08_RS08430 PF01842 ACT domain GPY08_RS08430 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GPY08_RS08430 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GPY08_RS08435 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) GPY08_RS08440 PF01812 5-formyltetrahydrofolate cyclo-ligase family GPY08_RS08450 PF05164 Cell division protein ZapA GPY08_RS08455 PF03695 Uncharacterised protein family (UPF0149) GPY08_RS08460 PF01494 FAD binding domain GPY08_RS08465 PF01494 FAD binding domain GPY08_RS08475 PF03129 Anticodon binding domain GPY08_RS08475 PF04073 Aminoacyl-tRNA editing domain GPY08_RS08475 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GPY08_RS08485 PF03937 Flavinator of succinate dehydrogenase GPY08_RS08495 PF00890 FAD binding domain GPY08_RS08495 PF02910 Fumarate reductase flavoprotein C-term GPY08_RS08500 PF08281 Sigma-70, region 4 GPY08_RS08500 PF04542 Sigma-70 region 2 GPY08_RS08505 PF03873 Anti sigma-E protein RseA, C-terminal domain GPY08_RS08505 PF03872 Anti sigma-E protein RseA, N-terminal domain GPY08_RS08510 PF17188 MucB/RseB C-terminal domain GPY08_RS08510 PF03888 MucB/RseB N-terminal domain GPY08_RS08520 PF06421 GTP-binding protein LepA C-terminus GPY08_RS08520 PF03144 Elongation factor Tu domain 2 GPY08_RS08520 PF00009 Elongation factor Tu GTP binding domain GPY08_RS08520 PF00679 Elongation factor G C-terminus GPY08_RS08530 PF00035 Double-stranded RNA binding motif GPY08_RS08530 PF14622 Ribonuclease-III-like GPY08_RS08535 PF01926 50S ribosome-binding GTPase GPY08_RS08535 PF07650 KH domain GPY08_RS08540 PF02565 Recombination protein O C terminal GPY08_RS08540 PF11967 Recombination protein O N terminal GPY08_RS08545 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ GPY08_RS08550 PF01648 4'-phosphopantetheinyl transferase superfamily GPY08_RS08555 PF01627 Hpt domain GPY08_RS08555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY08_RS08555 PF00672 HAMP domain GPY08_RS08555 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GPY08_RS08555 PF00072 Response regulator receiver domain GPY08_RS08555 PF00512 His Kinase A (phospho-acceptor) domain GPY08_RS08560 PF01938 TRAM domain GPY08_RS08560 PF05958 tRNA (Uracil-5-)-methyltransferase GPY08_RS08565 PF13291 ACT domain GPY08_RS08565 PF02824 TGS domain GPY08_RS08565 PF04607 Region found in RelA / SpoT proteins GPY08_RS08570 PF03819 MazG nucleotide pyrophosphohydrolase domain GPY08_RS08575 PF00117 Glutamine amidotransferase class-I GPY08_RS08575 PF06418 CTP synthase N-terminus GPY08_RS08580 PF03952 Enolase, N-terminal domain GPY08_RS08580 PF00113 Enolase, C-terminal TIM barrel domain GPY08_RS08585 PF12627 Probable RNA and SrmB- binding site of polymerase A GPY08_RS08585 PF01743 Poly A polymerase head domain GPY08_RS08585 PF01966 HD domain GPY08_RS08600 PF08239 Bacterial SH3 domain GPY08_RS08605 PF01384 Phosphate transporter family GPY08_RS08610 PF01865 Protein of unknown function DUF47 GPY08_RS08620 PF00027 Cyclic nucleotide-binding domain GPY08_RS08620 PF00520 Ion transport protein GPY08_RS08625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY08_RS08625 PF00672 HAMP domain GPY08_RS08635 PF00294 pfkB family carbohydrate kinase GPY08_RS08635 PF01467 Cytidylyltransferase-like GPY08_RS08640 PF02321 Outer membrane efflux protein GPY08_RS08645 PF00293 NUDIX domain GPY08_RS08650 PF06853 Protein of unknown function (DUF1249) GPY08_RS08655 PF00149 Calcineurin-like phosphoesterase GPY08_RS08660 PF05728 Uncharacterised protein family (UPF0227) GPY08_RS08665 PF00204 DNA gyrase B GPY08_RS08665 PF00986 DNA gyrase B subunit, carboxyl terminus GPY08_RS08665 PF01751 Toprim domain GPY08_RS08665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY08_RS08675 PF03884 DNA gyrase inhibitor YacG GPY08_RS08680 PF07072 Cell division protein GPY08_RS08685 PF01121 Dephospho-CoA kinase GPY08_RS08690 PF06750 Bacterial Peptidase A24 N-terminal domain GPY08_RS08690 PF01478 Type IV leader peptidase family GPY08_RS08700 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain GPY08_RS08700 PF00437 Type II/IV secretion system protein GPY08_RS08705 PF07963 Prokaryotic N-terminal methylation motif GPY08_RS08705 PF00114 Pilin (bacterial filament) GPY08_RS08710 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain GPY08_RS08710 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain GPY08_RS08715 PF01510 N-acetylmuramoyl-L-alanine amidase GPY08_RS08720 PF00258 Flavodoxin GPY08_RS08725 PF02899 Phage integrase, N-terminal SAM-like domain GPY08_RS08725 PF00589 Phage integrase family GPY08_RS08730 PF13098 Thioredoxin-like domain GPY08_RS08730 PF10411 Disulfide bond isomerase protein N-terminus GPY08_RS08735 PF01368 DHH family GPY08_RS08735 PF02272 DHHA1 domain GPY08_RS08735 PF17768 RecJ OB domain GPY08_RS08740 PF00392 Bacterial regulatory proteins, gntR family GPY08_RS08740 PF07729 FCD domain GPY08_RS08745 PF17831 Pyruvate dehydrogenase E1 component middle domain GPY08_RS08745 PF00456 Transketolase, thiamine diphosphate binding domain GPY08_RS08750 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GPY08_RS08750 PF00364 Biotin-requiring enzyme GPY08_RS08750 PF02817 e3 binding domain GPY08_RS08755 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY08_RS08755 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GPY08_RS08760 PF00440 Bacterial regulatory proteins, tetR family GPY08_RS08765 PF00156 Phosphoribosyl transferase domain GPY08_RS08770 PF00484 Carbonic anhydrase GPY08_RS08775 PF00005 ABC transporter GPY08_RS08780 PF01061 ABC-2 type transporter GPY08_RS08785 PF02569 Pantoate-beta-alanine ligase GPY08_RS08790 PF02548 Ketopantoate hydroxymethyltransferase GPY08_RS08795 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) GPY08_RS08800 PF01743 Poly A polymerase head domain GPY08_RS08800 PF12626 Polymerase A arginine-rich C-terminus GPY08_RS08800 PF12627 Probable RNA and SrmB- binding site of polymerase A GPY08_RS08810 PF01258 Prokaryotic dksA/traR C4-type zinc finger GPY08_RS08815 PF03749 Sugar fermentation stimulation protein RE domain GPY08_RS08815 PF17746 SfsA N-terminal OB domain GPY08_RS08820 PF08482 ATP-dependent helicase C-terminal GPY08_RS08820 PF00271 Helicase conserved C-terminal domain GPY08_RS08820 PF04408 Helicase associated domain (HA2) GPY08_RS08820 PF00270 DEAD/DEAH box helicase GPY08_RS08825 PF00912 Transglycosylase GPY08_RS08825 PF14814 Bifunctional transglycosylase second domain GPY08_RS08825 PF00905 Penicillin binding protein transpeptidase domain GPY08_RS08830 PF01734 Patatin-like phospholipase GPY08_RS08840 PF06062 Uncharacterised protein family (UPF0231) GPY08_RS08845 PF00543 Nitrogen regulatory protein P-II GPY08_RS08850 PF00909 Ammonium Transporter Family GPY08_RS08855 PF13416 Bacterial extracellular solute-binding protein GPY08_RS08865 PF08402 TOBE domain GPY08_RS08865 PF00005 ABC transporter GPY08_RS08870 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GPY08_RS08870 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GPY08_RS08870 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GPY08_RS08870 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GPY08_RS08875 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain GPY08_RS08875 PF06165 Glycosyltransferase family 36 GPY08_RS08880 PF00728 Glycosyl hydrolase family 20, catalytic domain GPY08_RS08880 PF02838 Glycosyl hydrolase family 20, domain 2 GPY08_RS08885 PF01869 BadF/BadG/BcrA/BcrD ATPase family GPY08_RS08895 PF00005 ABC transporter GPY08_RS08895 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GPY08_RS08900 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GPY08_RS08900 PF00005 ABC transporter GPY08_RS08910 PF00528 Binding-protein-dependent transport system inner membrane component GPY08_RS08915 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GPY08_RS08925 PF08468 Methyltransferase small domain N-terminal GPY08_RS08925 PF05175 Methyltransferase small domain GPY08_RS08930 PF01594 AI-2E family transporter GPY08_RS08940 PF00202 Aminotransferase class-III GPY08_RS08945 PF01521 Iron-sulphur cluster biosynthesis GPY08_RS08955 PF00873 AcrB/AcrD/AcrF family GPY08_RS08960 PF01551 Peptidase family M23 GPY08_RS08960 PF04225 Opacity-associated protein A LysM-like domain GPY08_RS08965 PF00579 tRNA synthetases class I (W and Y) GPY08_RS08965 PF01479 S4 domain GPY08_RS08980 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family GPY08_RS08985 PF13609 Gram-negative porin GPY08_RS08990 PF03449 Transcription elongation factor, N-terminal GPY08_RS08990 PF01272 Transcription elongation factor, GreA/GreB, C-term GPY08_RS08995 PF01985 CRS1 / YhbY (CRM) domain GPY08_RS09000 PF01728 FtsJ-like methyltransferase GPY08_RS09005 PF17862 AAA+ lid domain GPY08_RS09005 PF00004 ATPase family associated with various cellular activities (AAA) GPY08_RS09005 PF01434 Peptidase family M41 GPY08_RS09005 PF06480 FtsH Extracellular GPY08_RS09010 PF00809 Pterin binding enzyme GPY08_RS09015 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GPY08_RS09015 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GPY08_RS09015 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GPY08_RS09015 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GPY08_RS09020 PF03840 Preprotein translocase SecG subunit GPY08_RS09035 PF02576 RimP N-terminal domain GPY08_RS09035 PF17384 RimP C-terminal SH3 domain GPY08_RS09040 PF08529 NusA N-terminal domain GPY08_RS09040 PF00575 S1 RNA binding domain GPY08_RS09040 PF13184 NusA-like KH domain GPY08_RS09045 PF04760 Translation initiation factor IF-2, N-terminal region GPY08_RS09045 PF11987 Translation-initiation factor 2 GPY08_RS09045 PF00009 Elongation factor Tu GTP binding domain GPY08_RS09045 PF08364 Bacterial translation initiation factor IF-2 associated region GPY08_RS09050 PF02033 Ribosome-binding factor A GPY08_RS09055 PF16198 tRNA pseudouridylate synthase B C-terminal domain GPY08_RS09055 PF01509 TruB family pseudouridylate synthase (N terminal domain) GPY08_RS09055 PF09157 Pseudouridine synthase II TruB, C-terminal GPY08_RS09060 PF00312 Ribosomal protein S15 GPY08_RS09065 PF01138 3' exoribonuclease family, domain 1 GPY08_RS09065 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain GPY08_RS09065 PF03725 3' exoribonuclease family, domain 2 GPY08_RS09065 PF00575 S1 RNA binding domain GPY08_RS09065 PF00013 KH domain GPY08_RS09070 PF07719 Tetratricopeptide repeat GPY08_RS09070 PF13181 Tetratricopeptide repeat GPY08_RS09080 PF01554 MatE GPY08_RS09095 PF00563 EAL domain GPY08_RS09095 PF00990 Diguanylate cyclase, GGDEF domain GPY08_RS09095 PF03707 Bacterial signalling protein N terminal repeat GPY08_RS09105 PF13508 Acetyltransferase (GNAT) domain GPY08_RS09120 PF03707 Bacterial signalling protein N terminal repeat GPY08_RS09120 PF00563 EAL domain GPY08_RS09120 PF00990 Diguanylate cyclase, GGDEF domain GPY08_RS09125 PF16658 Class II release factor RF3, C-terminal domain GPY08_RS09125 PF03144 Elongation factor Tu domain 2 GPY08_RS09125 PF00009 Elongation factor Tu GTP binding domain GPY08_RS09130 PF00270 DEAD/DEAH box helicase GPY08_RS09130 PF00271 Helicase conserved C-terminal domain GPY08_RS09135 PF05175 Methyltransferase small domain GPY08_RS09140 PF05525 Branched-chain amino acid transport protein GPY08_RS09150 PF01336 OB-fold nucleic acid binding domain GPY08_RS09150 PF00152 tRNA synthetases class II (D, K and N) GPY08_RS09155 PF00072 Response regulator receiver domain GPY08_RS09155 PF02954 Bacterial regulatory protein, Fis family GPY08_RS09155 PF00158 Sigma-54 interaction domain GPY08_RS09165 PF00248 Aldo/keto reductase family GPY08_RS09175 PF02976 DNA mismatch repair enzyme MutH GPY08_RS09180 PF00293 NUDIX domain GPY08_RS09185 PF01590 GAF domain GPY08_RS09185 PF05524 PEP-utilising enzyme, N-terminal GPY08_RS09185 PF02896 PEP-utilising enzyme, TIM barrel domain GPY08_RS09185 PF00391 PEP-utilising enzyme, mobile domain GPY08_RS09190 PF01925 Sulfite exporter TauE/SafE GPY08_RS09195 PF01790 Prolipoprotein diacylglyceryl transferase GPY08_RS09200 PF00303 Thymidylate synthase GPY08_RS09205 PF02690 Na+/Pi-cotransporter GPY08_RS09210 PF03466 LysR substrate binding domain GPY08_RS09210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS09220 PF01649 Ribosomal protein S20 GPY08_RS09230 PF01687 Riboflavin kinase GPY08_RS09230 PF06574 FAD synthetase GPY08_RS09235 PF06827 Zinc finger found in FPG and IleRS GPY08_RS09235 PF00133 tRNA synthetases class I (I, L, M and V) GPY08_RS09235 PF08264 Anticodon-binding domain of tRNA GPY08_RS09240 PF01252 Signal peptidase (SPase) II GPY08_RS09245 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GPY08_RS09250 PF02401 LytB protein GPY08_RS09255 PF02554 Carbon starvation protein CstA GPY08_RS09270 PF13580 SIS domain GPY08_RS09275 PF03702 Anhydro-N-acetylmuramic acid kinase GPY08_RS09280 PF00933 Glycosyl hydrolase family 3 N terminal domain GPY08_RS09285 PF04397 LytTr DNA-binding domain GPY08_RS09285 PF00072 Response regulator receiver domain GPY08_RS09290 PF06580 Histidine kinase GPY08_RS09290 PF07694 5TMR of 5TMR-LYT GPY08_RS09295 PF00793 DAHP synthetase I family GPY08_RS09300 PF02153 Prephenate dehydrogenase GPY08_RS09300 PF01817 Chorismate mutase type II GPY08_RS09305 PF07238 PilZ domain GPY08_RS09310 PF00005 ABC transporter GPY08_RS09310 PF12848 ABC transporter GPY08_RS09320 PF01371 Trp repressor protein GPY08_RS09330 PF00563 EAL domain GPY08_RS09330 PF00990 Diguanylate cyclase, GGDEF domain GPY08_RS09335 PF13416 Bacterial extracellular solute-binding protein GPY08_RS09340 PF00800 Prephenate dehydratase GPY08_RS09340 PF01817 Chorismate mutase type II GPY08_RS09345 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein GPY08_RS09355 PF13525 Outer membrane lipoprotein GPY08_RS09360 PF01479 S4 domain GPY08_RS09360 PF00849 RNA pseudouridylate synthase GPY08_RS09370 PF00004 ATPase family associated with various cellular activities (AAA) GPY08_RS09370 PF07724 AAA domain (Cdc48 subfamily) GPY08_RS09370 PF17871 AAA lid domain GPY08_RS09370 PF10431 C-terminal, D2-small domain, of ClpB protein GPY08_RS09370 PF02861 Clp amino terminal domain, pathogenicity island component GPY08_RS09380 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GPY08_RS09385 PF00528 Binding-protein-dependent transport system inner membrane component GPY08_RS09390 PF00005 ABC transporter GPY08_RS09400 PF01979 Amidohydrolase family GPY08_RS09435 PF01738 Dienelactone hydrolase family GPY08_RS09445 PF00881 Nitroreductase family GPY08_RS09450 PF07690 Major Facilitator Superfamily GPY08_RS09455 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GPY08_RS09470 PF01722 BolA-like protein GPY08_RS09475 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) GPY08_RS09475 PF11973 NQRA C-terminal domain GPY08_RS09480 PF03116 NQR2, RnfD, RnfE family GPY08_RS09485 PF04205 FMN-binding domain GPY08_RS09490 PF02508 Rnf-Nqr subunit, membrane protein GPY08_RS09495 PF02508 Rnf-Nqr subunit, membrane protein GPY08_RS09500 PF00175 Oxidoreductase NAD-binding domain GPY08_RS09500 PF00970 Oxidoreductase FAD-binding domain GPY08_RS09500 PF00111 2Fe-2S iron-sulfur cluster binding domain GPY08_RS09505 PF02424 ApbE family GPY08_RS09535 PF00209 Sodium:neurotransmitter symporter family GPY08_RS09545 PF18030 RimK PreATP-grasp domain GPY08_RS09545 PF08443 RimK-like ATP-grasp domain GPY08_RS09550 PF18030 RimK PreATP-grasp domain GPY08_RS09550 PF08443 RimK-like ATP-grasp domain GPY08_RS09555 PF01546 Peptidase family M20/M25/M40 GPY08_RS09555 PF07687 Peptidase dimerisation domain GPY08_RS09560 PF00392 Bacterial regulatory proteins, gntR family GPY08_RS09560 PF00155 Aminotransferase class I and II GPY08_RS09565 PF00202 Aminotransferase class-III GPY08_RS09570 PF00171 Aldehyde dehydrogenase family GPY08_RS09575 PF03480 Bacterial extracellular solute-binding protein, family 7 GPY08_RS09585 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GPY08_RS09590 PF00860 Permease family GPY08_RS09595 PF00156 Phosphoribosyl transferase domain GPY08_RS09605 PF07417 Sigma factor-binding transcriptional regulator Crl GPY08_RS09610 PF00696 Amino acid kinase family GPY08_RS09610 PF01472 PUA domain GPY08_RS09615 PF00171 Aldehyde dehydrogenase family GPY08_RS09620 PF03477 ATP cone domain GPY08_RS09630 PF00677 Lumazine binding domain GPY08_RS09635 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GPY08_RS09635 PF00925 GTP cyclohydrolase II GPY08_RS09640 PF00885 6,7-dimethyl-8-ribityllumazine synthase GPY08_RS09645 PF01029 NusB family GPY08_RS09650 PF02769 AIR synthase related protein, C-terminal domain GPY08_RS09650 PF00586 AIR synthase related protein, N-terminal domain GPY08_RS09655 PF04608 Phosphatidylglycerophosphatase A GPY08_RS09660 PF11944 Protein of unknown function (DUF3461) GPY08_RS09665 PF01966 HD domain GPY08_RS09665 PF01909 Nucleotidyltransferase domain GPY08_RS09665 PF08335 GlnD PII-uridylyltransferase GPY08_RS09670 PF00557 Metallopeptidase family M24 GPY08_RS09675 PF00318 Ribosomal protein S2 GPY08_RS09680 PF00889 Elongation factor TS GPY08_RS09685 PF00696 Amino acid kinase family GPY08_RS09690 PF01765 Ribosome recycling factor GPY08_RS09695 PF01255 Putative undecaprenyl diphosphate synthase GPY08_RS09705 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase GPY08_RS09705 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain GPY08_RS09705 PF13288 DXP reductoisomerase C-terminal domain GPY08_RS09710 PF17820 PDZ domain GPY08_RS09710 PF02163 Peptidase family M50 GPY08_RS09715 PF07244 Surface antigen variable number repeat GPY08_RS09715 PF01103 Surface antigen GPY08_RS09720 PF03938 Outer membrane protein (OmpH-like) GPY08_RS09725 PF00132 Bacterial transferase hexapeptide (six repeats) GPY08_RS09725 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD GPY08_RS09730 PF07977 FabA-like domain GPY08_RS09735 PF00132 Bacterial transferase hexapeptide (six repeats) GPY08_RS09735 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 GPY08_RS09740 PF02684 Lipid-A-disaccharide synthetase GPY08_RS09745 PF01351 Ribonuclease HII GPY08_RS09750 PF14579 Helix-hairpin-helix motif GPY08_RS09750 PF01336 OB-fold nucleic acid binding domain GPY08_RS09750 PF02811 PHP domain GPY08_RS09750 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GPY08_RS09750 PF07733 Bacterial DNA polymerase III alpha NTPase domain GPY08_RS09755 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit GPY08_RS09760 PF01171 PP-loop family GPY08_RS09760 PF09179 TilS substrate binding domain GPY08_RS09760 PF11734 TilS substrate C-terminal domain GPY08_RS09765 PF00034 Cytochrome c GPY08_RS09770 PF00543 Nitrogen regulatory protein P-II GPY08_RS09775 PF03372 Endonuclease/Exonuclease/phosphatase family GPY08_RS09785 PF01464 Transglycosylase SLT domain GPY08_RS09785 PF01476 LysM domain GPY08_RS09795 PF08241 Methyltransferase domain GPY08_RS09800 PF00075 RNase H GPY08_RS09805 PF00929 Exonuclease GPY08_RS09815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GPY08_RS09815 PF02770 Acyl-CoA dehydrogenase, middle domain GPY08_RS09815 PF09317 Domain of unknown function (DUF1974) GPY08_RS09815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GPY08_RS09820 PF13580 SIS domain GPY08_RS09825 PF13230 Glutamine amidotransferases class-II GPY08_RS09830 PF00551 Formyl transferase GPY08_RS09835 PF02769 AIR synthase related protein, C-terminal domain GPY08_RS09835 PF00586 AIR synthase related protein, N-terminal domain GPY08_RS09845 PF01479 S4 domain GPY08_RS09845 PF00849 RNA pseudouridylate synthase GPY08_RS09870 PF00728 Glycosyl hydrolase family 20, catalytic domain GPY08_RS09870 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain GPY08_RS09870 PF03173 Putative carbohydrate binding domain GPY08_RS09870 PF02838 Glycosyl hydrolase family 20, domain 2 GPY08_RS09880 PF00403 Heavy-metal-associated domain GPY08_RS09885 PF00749 tRNA synthetases class I (E and Q), catalytic domain GPY08_RS09890 PF01389 OmpA-like transmembrane domain GPY08_RS09890 PF00691 OmpA family GPY08_RS09945 PF05840 Bacteriophage replication gene A protein (GPA) GPY08_RS10010 PF04316 Anti-sigma-28 factor, FlgM GPY08_RS10020 PF00072 Response regulator receiver domain GPY08_RS10020 PF01584 CheW-like domain GPY08_RS10025 PF01739 CheR methyltransferase, SAM binding domain GPY08_RS10025 PF03705 CheR methyltransferase, all-alpha domain GPY08_RS10030 PF00460 Flagella basal body rod protein GPY08_RS10035 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GPY08_RS10035 PF00460 Flagella basal body rod protein GPY08_RS10040 PF13861 FlgD Tudor-like domain GPY08_RS10040 PF13860 FlgD Ig-like domain GPY08_RS10040 PF03963 Flagellar hook capping protein - N-terminal region GPY08_RS10045 PF07559 Flagellar basal body protein FlaE GPY08_RS10045 PF00460 Flagella basal body rod protein GPY08_RS10045 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GPY08_RS10055 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GPY08_RS10055 PF00460 Flagella basal body rod protein GPY08_RS10060 PF02107 Flagellar L-ring protein GPY08_RS10065 PF02119 Flagellar P-ring protein GPY08_RS10070 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase GPY08_RS10070 PF10135 Rod binding protein GPY08_RS10085 PF00700 Bacterial flagellin C-terminal helical region GPY08_RS10085 PF07196 Flagellin hook IN motif GPY08_RS10085 PF00669 Bacterial flagellin N-terminal helical region GPY08_RS10090 PF00700 Bacterial flagellin C-terminal helical region GPY08_RS10090 PF07196 Flagellin hook IN motif GPY08_RS10090 PF00669 Bacterial flagellin N-terminal helical region GPY08_RS10180 PF01926 50S ribosome-binding GTPase GPY08_RS10180 PF06071 Protein of unknown function (DUF933) GPY08_RS10190 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase GPY08_RS10190 PF14572 Phosphoribosyl synthetase-associated domain GPY08_RS10200 PF03550 Outer membrane lipoprotein LolB GPY08_RS10205 PF01488 Shikimate / quinate 5-dehydrogenase GPY08_RS10205 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain GPY08_RS10205 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain GPY08_RS10210 PF00472 RF-1 domain GPY08_RS10210 PF03462 PCRF domain GPY08_RS10215 PF13847 Methyltransferase domain GPY08_RS10215 PF17827 PrmC N-terminal domain GPY08_RS10220 PF04247 Invasion gene expression up-regulator, SirB GPY08_RS10225 PF13369 Transglutaminase-like superfamily GPY08_RS10230 PF00793 DAHP synthetase I family GPY08_RS10235 PF02872 5'-nucleotidase, C-terminal domain GPY08_RS10235 PF00149 Calcineurin-like phosphoesterase GPY08_RS10240 PF04073 Aminoacyl-tRNA editing domain GPY08_RS10245 PF00860 Permease family GPY08_RS10265 PF03960 ArsC family GPY08_RS10270 PF13181 Tetratricopeptide repeat GPY08_RS10270 PF01435 Peptidase family M48 GPY08_RS10280 PF01594 AI-2E family transporter GPY08_RS10290 PF00578 AhpC/TSA family GPY08_RS10295 PF01842 ACT domain GPY08_RS10300 PF00701 Dihydrodipicolinate synthetase family GPY08_RS10305 PF06804 NlpB/DapX lipoprotein GPY08_RS10315 PF02557 D-alanyl-D-alanine carboxypeptidase GPY08_RS10320 PF07687 Peptidase dimerisation domain GPY08_RS10320 PF01546 Peptidase family M20/M25/M40 GPY08_RS10325 PF03960 ArsC family GPY08_RS10340 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain GPY08_RS10340 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain GPY08_RS10350 PF00356 Bacterial regulatory proteins, lacI family GPY08_RS10365 PF04261 Dyp-type peroxidase family GPY08_RS10370 PF00700 Bacterial flagellin C-terminal helical region GPY08_RS10370 PF00669 Bacterial flagellin N-terminal helical region GPY08_RS10370 PF07196 Flagellin hook IN motif GPY08_RS10375 PF07196 Flagellin hook IN motif GPY08_RS10375 PF00669 Bacterial flagellin N-terminal helical region GPY08_RS10375 PF00700 Bacterial flagellin C-terminal helical region GPY08_RS10380 PF00669 Bacterial flagellin N-terminal helical region GPY08_RS10380 PF07196 Flagellin hook IN motif GPY08_RS10380 PF00700 Bacterial flagellin C-terminal helical region GPY08_RS10400 PF02561 Flagellar protein FliS GPY08_RS10410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY08_RS10410 PF00512 His Kinase A (phospho-acceptor) domain GPY08_RS10415 PF02954 Bacterial regulatory protein, Fis family GPY08_RS10415 PF00072 Response regulator receiver domain GPY08_RS10415 PF00158 Sigma-54 interaction domain GPY08_RS10420 PF02049 Flagellar hook-basal body complex protein FliE GPY08_RS10430 PF14841 FliG middle domain GPY08_RS10430 PF01706 FliG C-terminal domain GPY08_RS10430 PF14842 FliG N-terminal domain GPY08_RS10440 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GPY08_RS10440 PF18269 T3SS EscN ATPase C-terminal domain GPY08_RS10460 PF02154 Flagellar motor switch protein FliM GPY08_RS10460 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GPY08_RS10465 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GPY08_RS10470 PF04347 Flagellar biosynthesis protein, FliO GPY08_RS10475 PF00813 FliP family GPY08_RS10480 PF01313 Bacterial export proteins, family 3 GPY08_RS10485 PF01311 Bacterial export proteins, family 1 GPY08_RS10490 PF01312 FlhB HrpN YscU SpaS Family GPY08_RS10495 PF01713 Smr domain GPY08_RS10500 PF05175 Methyltransferase small domain GPY08_RS10505 PF01264 Chorismate synthase GPY08_RS10510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS10510 PF03466 LysR substrate binding domain GPY08_RS10520 PF03458 UPF0126 domain GPY08_RS10525 PF04315 Elongation factor P hydroxylase GPY08_RS10530 PF08891 YfcL protein GPY08_RS10540 PF01266 FAD dependent oxidoreductase GPY08_RS10540 PF05430 S-adenosyl-L-methionine-dependent methyltransferase GPY08_RS10545 PF00109 Beta-ketoacyl synthase, N-terminal domain GPY08_RS10545 PF02801 Beta-ketoacyl synthase, C-terminal domain GPY08_RS10550 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GPY08_RS10550 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GPY08_RS10550 PF11890 Domain of unknown function (DUF3410) GPY08_RS10555 PF01118 Semialdehyde dehydrogenase, NAD binding domain GPY08_RS10555 PF02774 Semialdehyde dehydrogenase, dimerisation domain GPY08_RS10560 PF01475 Ferric uptake regulator family GPY08_RS10575 PF03788 LrgA family GPY08_RS10580 PF04172 LrgB-like family GPY08_RS10585 PF00258 Flavodoxin GPY08_RS10595 PF12697 Alpha/beta hydrolase family GPY08_RS10600 PF03925 SeqA protein C-terminal domain GPY08_RS10600 PF17206 SeqA protein N-terminal domain GPY08_RS10605 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GPY08_RS10605 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GPY08_RS10605 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GPY08_RS10605 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GPY08_RS10620 PF00285 Citrate synthase, C-terminal domain GPY08_RS10625 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GPY08_RS10630 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GPY08_RS10635 PF00890 FAD binding domain GPY08_RS10635 PF02910 Fumarate reductase flavoprotein C-term GPY08_RS10640 PF13085 2Fe-2S iron-sulfur cluster binding domain GPY08_RS10645 PF16078 2-oxoglutarate dehydrogenase N-terminus GPY08_RS10645 PF02779 Transketolase, pyrimidine binding domain GPY08_RS10645 PF16870 2-oxoglutarate dehydrogenase C-terminal GPY08_RS10645 PF00676 Dehydrogenase E1 component GPY08_RS10650 PF02817 e3 binding domain GPY08_RS10650 PF00364 Biotin-requiring enzyme GPY08_RS10650 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GPY08_RS10655 PF08442 ATP-grasp domain GPY08_RS10655 PF00549 CoA-ligase GPY08_RS10660 PF00549 CoA-ligase GPY08_RS10660 PF02629 CoA binding domain GPY08_RS10665 PF00950 ABC 3 transport family GPY08_RS10670 PF00005 ABC transporter GPY08_RS10675 PF01297 Zinc-uptake complex component A periplasmic GPY08_RS10685 PF04023 FeoA domain GPY08_RS10705 PF05746 DALR anticodon binding domain GPY08_RS10705 PF03485 Arginyl tRNA synthetase N terminal domain GPY08_RS10705 PF00750 tRNA synthetases class I (R) GPY08_RS10710 PF06185 YecM protein GPY08_RS10715 PF16187 Middle or third domain of peptidase_M16 GPY08_RS10715 PF05193 Peptidase M16 inactive domain GPY08_RS10715 PF00675 Insulinase (Peptidase family M16) GPY08_RS10720 PF00300 Histidine phosphatase superfamily (branch 1) GPY08_RS10730 PF00448 SRP54-type protein, GTPase domain GPY08_RS10735 PF10609 NUBPL iron-transfer P-loop NTPase GPY08_RS10740 PF04542 Sigma-70 region 2 GPY08_RS10740 PF04545 Sigma-70, region 4 GPY08_RS10740 PF04539 Sigma-70 region 3 GPY08_RS10745 PF00072 Response regulator receiver domain GPY08_RS10750 PF04344 Chemotaxis phosphatase, CheZ GPY08_RS10755 PF01627 Hpt domain GPY08_RS10755 PF01584 CheW-like domain GPY08_RS10755 PF07194 P2 response regulator binding domain GPY08_RS10755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY08_RS10755 PF02895 Signal transducing histidine kinase, homodimeric domain GPY08_RS10760 PF01339 CheB methylesterase GPY08_RS10760 PF00072 Response regulator receiver domain GPY08_RS10765 PF13614 AAA domain GPY08_RS10775 PF01584 CheW-like domain GPY08_RS10785 PF00005 ABC transporter GPY08_RS10790 PF03379 CcmB protein GPY08_RS10795 PF01578 Cytochrome C assembly protein GPY08_RS10800 PF04995 Heme exporter protein D (CcmD) GPY08_RS10805 PF03100 CcmE GPY08_RS10810 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal GPY08_RS10810 PF01578 Cytochrome C assembly protein GPY08_RS10815 PF08534 Redoxin GPY08_RS10820 PF03918 Cytochrome C biogenesis protein GPY08_RS10825 PF03918 Cytochrome C biogenesis protein GPY08_RS10830 PF04333 MlaA lipoprotein GPY08_RS10845 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GPY08_RS10845 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GPY08_RS10850 PF00462 Glutaredoxin GPY08_RS10855 PF01131 DNA topoisomerase GPY08_RS10855 PF01751 Toprim domain GPY08_RS10860 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase GPY08_RS10860 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit GPY08_RS10865 PF01494 FAD binding domain GPY08_RS10870 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GPY08_RS10885 PF00248 Aldo/keto reductase family GPY08_RS10890 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GPY08_RS10900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS10900 PF03466 LysR substrate binding domain GPY08_RS10905 PF04909 Amidohydrolase GPY08_RS10910 PF03737 Aldolase/RraA GPY08_RS10915 PF04303 PrpF protein GPY08_RS10920 PF04909 Amidohydrolase GPY08_RS10930 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase GPY08_RS10945 PF01970 Tripartite tricarboxylate transporter TctA family GPY08_RS10950 PF08501 Shikimate dehydrogenase substrate binding domain GPY08_RS10950 PF01488 Shikimate / quinate 5-dehydrogenase GPY08_RS10950 PF18317 Shikimate 5'-dehydrogenase C-terminal domain GPY08_RS10955 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GPY08_RS10965 PF00850 Histone deacetylase domain GPY08_RS10975 PF00155 Aminotransferase class I and II GPY08_RS10990 PF11893 Domain of unknown function (DUF3413) GPY08_RS10990 PF00884 Sulfatase GPY08_RS10995 PF07208 Protein of unknown function (DUF1414) GPY08_RS11000 PF04245 37-kD nucleoid-associated bacterial protein GPY08_RS11010 PF03553 Na+/H+ antiporter family GPY08_RS11015 PF01118 Semialdehyde dehydrogenase, NAD binding domain GPY08_RS11015 PF02774 Semialdehyde dehydrogenase, dimerisation domain GPY08_RS11020 PF00027 Cyclic nucleotide-binding domain GPY08_RS11020 PF00520 Ion transport protein GPY08_RS11025 PF01914 MarC family integral membrane protein GPY08_RS11030 PF00171 Aldehyde dehydrogenase family GPY08_RS11030 PF00465 Iron-containing alcohol dehydrogenase GPY08_RS11040 PF00916 Sulfate permease family GPY08_RS11040 PF01740 STAS domain GPY08_RS11050 PF12111 Polyribonucleotide phosphorylase C terminal GPY08_RS11050 PF00575 S1 RNA binding domain GPY08_RS11050 PF10150 Ribonuclease E/G family GPY08_RS11055 PF01479 S4 domain GPY08_RS11055 PF00849 RNA pseudouridylate synthase GPY08_RS11060 PF02545 Maf-like protein GPY08_RS11065 PF02620 Large ribosomal RNA subunit accumulation protein YceD GPY08_RS11070 PF01783 Ribosomal L32p protein family GPY08_RS11075 PF02504 Fatty acid synthesis protein GPY08_RS11080 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GPY08_RS11080 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GPY08_RS11085 PF00698 Acyl transferase domain GPY08_RS11095 PF00550 Phosphopantetheine attachment site GPY08_RS11100 PF00109 Beta-ketoacyl synthase, N-terminal domain GPY08_RS11100 PF02801 Beta-ketoacyl synthase, C-terminal domain GPY08_RS11105 PF01063 Amino-transferase class IV GPY08_RS11110 PF02618 YceG-like family GPY08_RS11115 PF02223 Thymidylate kinase GPY08_RS11120 PF09115 DNA polymerase III, delta subunit, C terminal GPY08_RS11125 PF01026 TatD related DNase GPY08_RS11160 PF00209 Sodium:neurotransmitter symporter family GPY08_RS11175 PF01734 Patatin-like phospholipase GPY08_RS11185 PF00480 ROK family GPY08_RS11190 PF00072 Response regulator receiver domain GPY08_RS11190 PF01584 CheW-like domain GPY08_RS11195 PF02811 PHP domain GPY08_RS11195 PF07733 Bacterial DNA polymerase III alpha NTPase domain GPY08_RS11195 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GPY08_RS11195 PF14579 Helix-hairpin-helix motif GPY08_RS11195 PF01336 OB-fold nucleic acid binding domain GPY08_RS11215 PF01343 Peptidase family S49 GPY08_RS11215 PF08496 Peptidase family S49 N-terminal GPY08_RS11265 PF00155 Aminotransferase class I and II GPY08_RS11270 PF00425 chorismate binding enzyme GPY08_RS11275 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GPY08_RS11275 PF16582 Middle domain of thiamine pyrophosphate GPY08_RS11275 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GPY08_RS11280 PF12697 Alpha/beta hydrolase family GPY08_RS11285 PF00378 Enoyl-CoA hydratase/isomerase GPY08_RS11290 PF13378 Enolase C-terminal domain-like GPY08_RS11295 PF13193 AMP-binding enzyme C-terminal domain GPY08_RS11295 PF00501 AMP-binding enzyme GPY08_RS11305 PF03601 Conserved hypothetical protein 698 GPY08_RS11310 PF07690 Major Facilitator Superfamily GPY08_RS11330 PF06445 GyrI-like small molecule binding domain GPY08_RS11335 PF01464 Transglycosylase SLT domain GPY08_RS11335 PF01476 LysM domain GPY08_RS11355 PF00460 Flagella basal body rod protein GPY08_RS11360 PF00460 Flagella basal body rod protein GPY08_RS11360 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GPY08_RS11365 PF13861 FlgD Tudor-like domain GPY08_RS11365 PF13860 FlgD Ig-like domain GPY08_RS11365 PF03963 Flagellar hook capping protein - N-terminal region GPY08_RS11370 PF00460 Flagella basal body rod protein GPY08_RS11370 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GPY08_RS11370 PF07559 Flagellar basal body protein FlaE GPY08_RS11375 PF00460 Flagella basal body rod protein GPY08_RS11375 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GPY08_RS11380 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GPY08_RS11380 PF00460 Flagella basal body rod protein GPY08_RS11385 PF02107 Flagellar L-ring protein GPY08_RS11390 PF02119 Flagellar P-ring protein GPY08_RS11395 PF10135 Rod binding protein GPY08_RS11395 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase GPY08_RS11400 PF00460 Flagella basal body rod protein GPY08_RS11400 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GPY08_RS11420 PF04962 KduI/IolB family GPY08_RS11425 PF03480 Bacterial extracellular solute-binding protein, family 7 GPY08_RS11470 PF01370 NAD dependent epimerase/dehydratase family GPY08_RS11475 PF04170 NlpE N-terminal domain GPY08_RS11485 PF13677 Membrane MotB of proton-channel complex MotA/MotB GPY08_RS11485 PF00691 OmpA family GPY08_RS11490 PF01618 MotA/TolQ/ExbB proton channel family GPY08_RS11495 PF04545 Sigma-70, region 4 GPY08_RS11495 PF04542 Sigma-70 region 2 GPY08_RS11500 PF03748 Flagellar basal body-associated protein FliL GPY08_RS11520 PF02465 Flagellar hook-associated protein 2 N-terminus GPY08_RS11520 PF07196 Flagellin hook IN motif GPY08_RS11520 PF07195 Flagellar hook-associated protein 2 C-terminus GPY08_RS11525 PF00700 Bacterial flagellin C-terminal helical region GPY08_RS11525 PF00669 Bacterial flagellin N-terminal helical region GPY08_RS11540 PF01312 FlhB HrpN YscU SpaS Family GPY08_RS11550 PF01313 Bacterial export proteins, family 3 GPY08_RS11555 PF00813 FliP family GPY08_RS11560 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GPY08_RS11570 PF00691 OmpA family GPY08_RS11575 PF00158 Sigma-54 interaction domain GPY08_RS11575 PF00072 Response regulator receiver domain GPY08_RS11575 PF02954 Bacterial regulatory protein, Fis family GPY08_RS11580 PF02049 Flagellar hook-basal body complex protein FliE GPY08_RS11585 PF08345 Flagellar M-ring protein C-terminal GPY08_RS11585 PF01514 Secretory protein of YscJ/FliF family GPY08_RS11590 PF14841 FliG middle domain GPY08_RS11590 PF14842 FliG N-terminal domain GPY08_RS11590 PF01706 FliG C-terminal domain GPY08_RS11600 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GPY08_RS11600 PF18269 T3SS EscN ATPase C-terminal domain GPY08_RS11610 PF00291 Pyridoxal-phosphate dependent enzyme GPY08_RS11625 PF09619 Type III secretion system lipoprotein chaperone (YscW) GPY08_RS11630 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GPY08_RS11675 PF00892 EamA-like transporter family GPY08_RS11685 PF00313 'Cold-shock' DNA-binding domain GPY08_RS11705 PF03358 NADPH-dependent FMN reductase GPY08_RS11710 PF02311 AraC-like ligand binding domain GPY08_RS11710 PF12833 Helix-turn-helix domain GPY08_RS11720 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg GPY08_RS11720 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase GPY08_RS11720 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II GPY08_RS11725 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GPY08_RS11730 PF01161 Phosphatidylethanolamine-binding protein GPY08_RS11740 PF01638 HxlR-like helix-turn-helix GPY08_RS11765 PF01588 Putative tRNA binding domain GPY08_RS11765 PF09334 tRNA synthetases class I (M) GPY08_RS11780 PF11604 Copper binding periplasmic protein CusF GPY08_RS11795 PF00512 His Kinase A (phospho-acceptor) domain GPY08_RS11795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY08_RS11795 PF08521 Two-component sensor kinase N-terminal GPY08_RS11800 PF00072 Response regulator receiver domain GPY08_RS11800 PF00486 Transcriptional regulatory protein, C terminal GPY08_RS11805 PF01569 PAP2 superfamily GPY08_RS11820 PF00884 Sulfatase GPY08_RS11825 PF01219 Prokaryotic diacylglycerol kinase GPY08_RS11830 PF08019 Phosphoethanolamine transferase EptA/EptB GPY08_RS11830 PF00884 Sulfatase GPY08_RS11850 PF00196 Bacterial regulatory proteins, luxR family GPY08_RS11850 PF00072 Response regulator receiver domain GPY08_RS11855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY08_RS11855 PF00512 His Kinase A (phospho-acceptor) domain GPY08_RS11860 PF13247 4Fe-4S dicluster domain GPY08_RS11865 PF03916 Polysulphide reductase, NrfD GPY08_RS11875 PF00034 Cytochrome c GPY08_RS11880 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GPY08_RS11890 PF00990 Diguanylate cyclase, GGDEF domain GPY08_RS11890 PF03707 Bacterial signalling protein N terminal repeat GPY08_RS11890 PF00563 EAL domain GPY08_RS11900 PF01654 Cytochrome bd terminal oxidase subunit I GPY08_RS11905 PF02322 Cytochrome bd terminal oxidase subunit II GPY08_RS11940 PF00999 Sodium/hydrogen exchanger family GPY08_RS11940 PF02254 TrkA-N domain GPY08_RS11945 PF02525 Flavodoxin-like fold GPY08_RS11955 PF00857 Isochorismatase family GPY08_RS11955 PF00550 Phosphopantetheine attachment site GPY08_RS11960 PF00501 AMP-binding enzyme GPY08_RS11960 PF13193 AMP-binding enzyme C-terminal domain GPY08_RS11965 PF00425 chorismate binding enzyme GPY08_RS11975 PF00793 DAHP synthetase I family GPY08_RS11985 PF00668 Condensation domain GPY08_RS11985 PF13193 AMP-binding enzyme C-terminal domain GPY08_RS11985 PF00550 Phosphopantetheine attachment site GPY08_RS11985 PF00501 AMP-binding enzyme GPY08_RS11990 PF00296 Luciferase-like monooxygenase GPY08_RS11995 PF01497 Periplasmic binding protein GPY08_RS12005 PF01032 FecCD transport family GPY08_RS12020 PF00501 AMP-binding enzyme GPY08_RS12020 PF13193 AMP-binding enzyme C-terminal domain GPY08_RS12020 PF00668 Condensation domain GPY08_RS12020 PF00550 Phosphopantetheine attachment site GPY08_RS12020 PF00975 Thioesterase domain GPY08_RS12025 PF00005 ABC transporter GPY08_RS12035 PF00356 Bacterial regulatory proteins, lacI family GPY08_RS12050 PF02581 Thiamine monophosphate synthase GPY08_RS12055 PF02110 Hydroxyethylthiazole kinase family GPY08_RS12060 PF08543 Phosphomethylpyrimidine kinase GPY08_RS12065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GPY08_RS12065 PF00005 ABC transporter GPY08_RS12070 PF12911 N-terminal TM domain of oligopeptide transport permease C GPY08_RS12070 PF00528 Binding-protein-dependent transport system inner membrane component GPY08_RS12075 PF00528 Binding-protein-dependent transport system inner membrane component GPY08_RS12080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GPY08_RS12090 PF02321 Outer membrane efflux protein GPY08_RS12095 PF00529 HlyD membrane-fusion protein of T1SS GPY08_RS12095 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GPY08_RS12100 PF07690 Major Facilitator Superfamily GPY08_RS12105 PF12833 Helix-turn-helix domain GPY08_RS12105 PF06445 GyrI-like small molecule binding domain GPY08_RS12110 PF07715 TonB-dependent Receptor Plug Domain GPY08_RS12110 PF00593 TonB dependent receptor GPY08_RS12115 PF00072 Response regulator receiver domain GPY08_RS12115 PF00486 Transcriptional regulatory protein, C terminal GPY08_RS12120 PF00512 His Kinase A (phospho-acceptor) domain GPY08_RS12120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY08_RS12125 PF00367 phosphotransferase system, EIIB GPY08_RS12125 PF02378 Phosphotransferase system, EIIC GPY08_RS12130 PF00356 Bacterial regulatory proteins, lacI family GPY08_RS12135 PF00251 Glycosyl hydrolases family 32 N-terminal domain GPY08_RS12135 PF08244 Glycosyl hydrolases family 32 C terminal GPY08_RS12140 PF13426 PAS domain GPY08_RS12140 PF00990 Diguanylate cyclase, GGDEF domain GPY08_RS12140 PF00563 EAL domain GPY08_RS12160 PF00109 Beta-ketoacyl synthase, N-terminal domain GPY08_RS12160 PF02801 Beta-ketoacyl synthase, C-terminal domain GPY08_RS12175 PF00109 Beta-ketoacyl synthase, N-terminal domain GPY08_RS12175 PF02801 Beta-ketoacyl synthase, C-terminal domain GPY08_RS12200 PF00221 Aromatic amino acid lyase GPY08_RS12205 PF00535 Glycosyl transferase family 2 GPY08_RS12215 PF13193 AMP-binding enzyme C-terminal domain GPY08_RS12215 PF00501 AMP-binding enzyme GPY08_RS12225 PF00550 Phosphopantetheine attachment site GPY08_RS12230 PF00550 Phosphopantetheine attachment site GPY08_RS12235 PF00501 AMP-binding enzyme GPY08_RS12235 PF01553 Acyltransferase GPY08_RS12235 PF13193 AMP-binding enzyme C-terminal domain GPY08_RS12260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GPY08_RS12270 PF00528 Binding-protein-dependent transport system inner membrane component GPY08_RS12270 PF12911 N-terminal TM domain of oligopeptide transport permease C GPY08_RS12275 PF00005 ABC transporter GPY08_RS12275 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GPY08_RS12280 PF00005 ABC transporter GPY08_RS12280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GPY08_RS12290 PF13409 Glutathione S-transferase, N-terminal domain GPY08_RS12295 PF13194 Domain of unknown function (DUF4010) GPY08_RS12300 PF07085 DRTGG domain GPY08_RS12300 PF01515 Phosphate acetyl/butaryl transferase GPY08_RS12305 PF00871 Acetokinase family GPY08_RS12310 PF04217 Protein of unknown function, DUF412 GPY08_RS12320 PF02653 Branched-chain amino acid transport system / permease component GPY08_RS12325 PF00005 ABC transporter GPY08_RS12335 PF01207 Dihydrouridine synthase (Dus) GPY08_RS12345 PF07517 SecA DEAD-like domain GPY08_RS12345 PF07516 SecA Wing and Scaffold domain GPY08_RS12345 PF02810 SEC-C motif GPY08_RS12345 PF01043 SecA preprotein cross-linking domain GPY08_RS12350 PF03548 Outer membrane lipoprotein carrier protein LolA GPY08_RS12355 PF00004 ATPase family associated with various cellular activities (AAA) GPY08_RS12355 PF16193 AAA C-terminal domain GPY08_RS12355 PF12002 MgsA AAA+ ATPase C terminal GPY08_RS12360 PF02403 Seryl-tRNA synthetase N-terminal domain GPY08_RS12360 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GPY08_RS12370 PF00384 Molybdopterin oxidoreductase GPY08_RS12370 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GPY08_RS12370 PF04324 BFD-like [2Fe-2S] binding domain GPY08_RS12370 PF01568 Molydopterin dinucleotide binding domain GPY08_RS12375 PF10414 Sirohaem synthase dimerisation region GPY08_RS12375 PF14824 Sirohaem biosynthesis protein central GPY08_RS12375 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GPY08_RS12380 PF00591 Glycosyl transferase family, a/b domain GPY08_RS12380 PF02885 Glycosyl transferase family, helical bundle domain GPY08_RS12385 PF03861 ANTAR domain GPY08_RS12385 PF00072 Response regulator receiver domain GPY08_RS12395 PF00528 Binding-protein-dependent transport system inner membrane component GPY08_RS12400 PF00005 ABC transporter GPY08_RS12415 PF00202 Aminotransferase class-III GPY08_RS12420 PF06968 Biotin and Thiamin Synthesis associated domain GPY08_RS12420 PF04055 Radical SAM superfamily GPY08_RS12430 PF08241 Methyltransferase domain GPY08_RS12445 PF01435 Peptidase family M48 GPY08_RS12490 PF00206 Lyase GPY08_RS12490 PF08328 Adenylosuccinate lyase C-terminal GPY08_RS12495 PF04356 Protein of unknown function (DUF489) GPY08_RS12505 PF00294 pfkB family carbohydrate kinase GPY08_RS12510 PF00816 H-NS histone family GPY08_RS12520 PF00158 Sigma-54 interaction domain GPY08_RS12520 PF00072 Response regulator receiver domain GPY08_RS12520 PF02954 Bacterial regulatory protein, Fis family GPY08_RS12525 PF08029 HisG, C-terminal domain GPY08_RS12525 PF01634 ATP phosphoribosyltransferase GPY08_RS12530 PF00815 Histidinol dehydrogenase GPY08_RS12535 PF00155 Aminotransferase class I and II GPY08_RS12540 PF08645 Polynucleotide kinase 3 phosphatase GPY08_RS12540 PF00475 Imidazoleglycerol-phosphate dehydratase GPY08_RS12550 PF00977 Histidine biosynthesis protein GPY08_RS12555 PF00977 Histidine biosynthesis protein GPY08_RS12560 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase GPY08_RS12560 PF01502 Phosphoribosyl-AMP cyclohydrolase GPY08_RS12565 PF00849 RNA pseudouridylate synthase GPY08_RS12570 PF03971 Monomeric isocitrate dehydrogenase GPY08_RS12575 PF00313 'Cold-shock' DNA-binding domain GPY08_RS12580 PF02617 ATP-dependent Clp protease adaptor protein ClpS GPY08_RS12585 PF00004 ATPase family associated with various cellular activities (AAA) GPY08_RS12585 PF07724 AAA domain (Cdc48 subfamily) GPY08_RS12585 PF17871 AAA lid domain GPY08_RS12585 PF02861 Clp amino terminal domain, pathogenicity island component GPY08_RS12585 PF10431 C-terminal, D2-small domain, of ClpB protein GPY08_RS12590 PF01176 Translation initiation factor 1A / IF-1 GPY08_RS12595 PF04377 Arginine-tRNA-protein transferase, C terminus GPY08_RS12595 PF04376 Arginine-tRNA-protein transferase, N terminus GPY08_RS12600 PF03588 Leucyl/phenylalanyl-tRNA protein transferase GPY08_RS12610 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GPY08_RS12615 PF10692 Protein of unknown function (DUF2498) GPY08_RS12620 PF01396 Topoisomerase DNA binding C4 zinc finger GPY08_RS12620 PF01751 Toprim domain GPY08_RS12620 PF01131 DNA topoisomerase GPY08_RS12620 PF08272 Topoisomerase I zinc-ribbon-like GPY08_RS12625 PF00990 Diguanylate cyclase, GGDEF domain GPY08_RS12625 PF00072 Response regulator receiver domain GPY08_RS12630 PF00483 Nucleotidyl transferase GPY08_RS12635 PF00534 Glycosyl transferases group 1 GPY08_RS12635 PF08323 Starch synthase catalytic domain GPY08_RS12655 PF04993 TfoX N-terminal domain GPY08_RS12655 PF04994 TfoX C-terminal domain GPY08_RS12660 PF00356 Bacterial regulatory proteins, lacI family GPY08_RS12665 PF02613 Nitrate reductase delta subunit GPY08_RS12670 PF00486 Transcriptional regulatory protein, C terminal GPY08_RS12670 PF00072 Response regulator receiver domain GPY08_RS12675 PF02698 DUF218 domain GPY08_RS12685 PF17192 MukF middle domain GPY08_RS12685 PF17193 MukF C-terminal domain GPY08_RS12685 PF03882 MukF winged-helix domain GPY08_RS12690 PF04288 MukE-like family GPY08_RS12695 PF04310 MukB N-terminal GPY08_RS12695 PF16330 MukB hinge domain GPY08_RS12700 PF18030 RimK PreATP-grasp domain GPY08_RS12700 PF08443 RimK-like ATP-grasp domain GPY08_RS12710 PF18030 RimK PreATP-grasp domain GPY08_RS12710 PF08443 RimK-like ATP-grasp domain GPY08_RS12715 PF08003 Protein of unknown function (DUF1698) GPY08_RS12720 PF13649 Methyltransferase domain GPY08_RS12730 PF01336 OB-fold nucleic acid binding domain GPY08_RS12730 PF00152 tRNA synthetases class II (D, K and N) GPY08_RS12730 PF02938 GAD domain GPY08_RS12735 PF00265 Thymidine kinase GPY08_RS12740 PF02698 DUF218 domain GPY08_RS12745 PF01370 NAD dependent epimerase/dehydratase family GPY08_RS12750 PF03466 LysR substrate binding domain GPY08_RS12750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS12765 PF01226 Formate/nitrite transporter GPY08_RS12770 PF03649 Uncharacterised protein family (UPF0014) GPY08_RS12775 PF06796 Periplasmic nitrate reductase protein NapE GPY08_RS12780 PF03264 NapC/NirT cytochrome c family, N-terminal region GPY08_RS12785 PF00384 Molybdopterin oxidoreductase GPY08_RS12785 PF18364 Molybdopterin oxidoreductase N-terminal domain GPY08_RS12785 PF01568 Molydopterin dinucleotide binding domain GPY08_RS12805 PF01368 DHH family GPY08_RS12805 PF02833 DHHA2 domain GPY08_RS12820 PF00005 ABC transporter GPY08_RS12825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GPY08_RS12825 PF00005 ABC transporter GPY08_RS12830 PF12911 N-terminal TM domain of oligopeptide transport permease C GPY08_RS12830 PF00528 Binding-protein-dependent transport system inner membrane component GPY08_RS12840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GPY08_RS12850 PF04012 PspA/IM30 family GPY08_RS12855 PF06667 Phage shock protein B GPY08_RS12865 PF00529 HlyD membrane-fusion protein of T1SS GPY08_RS12865 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GPY08_RS12880 PF03352 Methyladenine glycosylase GPY08_RS12880 PF00958 GMP synthase C terminal domain GPY08_RS12880 PF00117 Glutamine amidotransferase class-I GPY08_RS12880 PF13673 Acetyltransferase (GNAT) domain GPY08_RS12880 PF13302 Acetyltransferase (GNAT) domain GPY08_RS12900 PF08534 Redoxin GPY08_RS12915 PF13091 PLD-like domain GPY08_RS12915 PF13396 Phospholipase_D-nuclease N-terminal GPY08_RS12920 PF00209 Sodium:neurotransmitter symporter family GPY08_RS12925 PF10415 Fumarase C C-terminus GPY08_RS12925 PF00206 Lyase GPY08_RS12940 PF00849 RNA pseudouridylate synthase GPY08_RS12950 PF00701 Dihydrodipicolinate synthetase family GPY08_RS12955 PF01066 CDP-alcohol phosphatidyltransferase GPY08_RS12960 PF00005 ABC transporter GPY08_RS12965 PF00528 Binding-protein-dependent transport system inner membrane component GPY08_RS12970 PF13416 Bacterial extracellular solute-binding protein GPY08_RS12980 PF06945 Protein of unknown function (DUF1289) GPY08_RS12995 PF00005 ABC transporter GPY08_RS13005 PF03222 Tryptophan/tyrosine permease family GPY08_RS13020 PF00990 Diguanylate cyclase, GGDEF domain GPY08_RS13020 PF17158 Membrane-associated sensor, integral membrane domain GPY08_RS13025 PF01717 Cobalamin-independent synthase, Catalytic domain GPY08_RS13035 PF00313 'Cold-shock' DNA-binding domain GPY08_RS13050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS13050 PF03466 LysR substrate binding domain GPY08_RS13055 PF00884 Sulfatase GPY08_RS13060 PF13186 Iron-sulfur cluster-binding domain GPY08_RS13060 PF04055 Radical SAM superfamily GPY08_RS13065 PF17863 AAA lid domain GPY08_RS13065 PF07726 ATPase family associated with various cellular activities (AAA) GPY08_RS13100 PF01386 Ribosomal L25p family GPY08_RS13105 PF00672 HAMP domain GPY08_RS13105 PF00512 His Kinase A (phospho-acceptor) domain GPY08_RS13105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY08_RS13110 PF00072 Response regulator receiver domain GPY08_RS13110 PF00486 Transcriptional regulatory protein, C terminal GPY08_RS13120 PF04851 Type III restriction enzyme, res subunit GPY08_RS13120 PF00271 Helicase conserved C-terminal domain GPY08_RS13125 PF00849 RNA pseudouridylate synthase GPY08_RS13125 PF01479 S4 domain GPY08_RS13130 PF07690 Major Facilitator Superfamily GPY08_RS13140 PF13460 NAD(P)H-binding GPY08_RS13140 PF11066 Protein of unknown function (DUF2867) GPY08_RS13145 PF01554 MatE GPY08_RS13170 PF00691 OmpA family GPY08_RS13170 PF05736 OprF membrane domain GPY08_RS13190 PF00202 Aminotransferase class-III GPY08_RS13195 PF03435 Saccharopine dehydrogenase NADP binding domain GPY08_RS13195 PF16653 Saccharopine dehydrogenase C-terminal domain GPY08_RS13205 PF17200 Single Cache domain 2 GPY08_RS13205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY08_RS13205 PF00672 HAMP domain GPY08_RS13215 PF03480 Bacterial extracellular solute-binding protein, family 7 GPY08_RS13225 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GPY08_RS13230 PF01202 Shikimate kinase GPY08_RS13235 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain GPY08_RS13235 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GPY08_RS13245 PF00994 Probable molybdopterin binding domain GPY08_RS13255 PF00175 Oxidoreductase NAD-binding domain GPY08_RS13255 PF00111 2Fe-2S iron-sulfur cluster binding domain GPY08_RS13255 PF00970 Oxidoreductase FAD-binding domain GPY08_RS13260 PF00268 Ribonucleotide reductase, small chain GPY08_RS13265 PF02867 Ribonucleotide reductase, barrel domain GPY08_RS13265 PF03477 ATP cone domain GPY08_RS13265 PF00317 Ribonucleotide reductase, all-alpha domain GPY08_RS13275 PF00521 DNA gyrase/topoisomerase IV, subunit A GPY08_RS13275 PF03989 DNA gyrase C-terminal domain, beta-propeller GPY08_RS13285 PF00925 GTP cyclohydrolase II GPY08_RS13310 PF01471 Putative peptidoglycan binding domain GPY08_RS13310 PF03734 L,D-transpeptidase catalytic domain GPY08_RS13315 PF05951 Bacterial protein of unknown function (DUF882) GPY08_RS13320 PF00753 Metallo-beta-lactamase superfamily GPY08_RS13335 PF03480 Bacterial extracellular solute-binding protein, family 7 GPY08_RS13345 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GPY08_RS13350 PF17200 Single Cache domain 2 GPY08_RS13350 PF07730 Histidine kinase GPY08_RS13355 PF00196 Bacterial regulatory proteins, luxR family GPY08_RS13355 PF00072 Response regulator receiver domain GPY08_RS13360 PF01047 MarR family GPY08_RS13370 PF00672 HAMP domain GPY08_RS13370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY08_RS13375 PF00929 Exonuclease GPY08_RS13375 PF02811 PHP domain GPY08_RS13375 PF14579 Helix-hairpin-helix motif GPY08_RS13375 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GPY08_RS13375 PF07733 Bacterial DNA polymerase III alpha NTPase domain GPY08_RS13380 PF00571 CBS domain GPY08_RS13390 PF00155 Aminotransferase class I and II GPY08_RS13405 PF00152 tRNA synthetases class II (D, K and N) GPY08_RS13405 PF01336 OB-fold nucleic acid binding domain GPY08_RS13410 PF17200 Single Cache domain 2 GPY08_RS13410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY08_RS13410 PF00672 HAMP domain GPY08_RS13415 PF01242 6-pyruvoyl tetrahydropterin synthase GPY08_RS13420 PF02321 Outer membrane efflux protein GPY08_RS13430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GPY08_RS13435 PF03315 Serine dehydratase beta chain GPY08_RS13435 PF03313 Serine dehydratase alpha chain GPY08_RS13440 PF03222 Tryptophan/tyrosine permease family GPY08_RS13445 PF00293 NUDIX domain GPY08_RS13455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY08_RS13455 PF09308 LuxQ, periplasmic GPY08_RS13455 PF00512 His Kinase A (phospho-acceptor) domain GPY08_RS13455 PF00072 Response regulator receiver domain GPY08_RS13460 PF00425 chorismate binding enzyme GPY08_RS13460 PF04715 Anthranilate synthase component I, N terminal region GPY08_RS13475 PF04317 YcjX-like family, DUF463 GPY08_RS13480 PF05128 Domain of unknown function (DUF697) GPY08_RS13485 PF18024 Helix-turn-helix domain GPY08_RS13485 PF00158 Sigma-54 interaction domain GPY08_RS13490 PF13302 Acetyltransferase (GNAT) domain GPY08_RS13505 PF00892 EamA-like transporter family GPY08_RS13510 PF00939 Sodium:sulfate symporter transmembrane region GPY08_RS13520 PF00072 Response regulator receiver domain GPY08_RS13520 PF02954 Bacterial regulatory protein, Fis family GPY08_RS13520 PF00158 Sigma-54 interaction domain GPY08_RS13525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS13525 PF03466 LysR substrate binding domain GPY08_RS13530 PF03992 Antibiotic biosynthesis monooxygenase GPY08_RS13535 PF00881 Nitroreductase family GPY08_RS13540 PF04400 (Na+)-NQR maturation NqrM GPY08_RS13550 PF02929 Beta galactosidase small chain GPY08_RS13550 PF02837 Glycosyl hydrolases family 2, sugar binding domain GPY08_RS13550 PF16353 Domain of unknown function(DUF4981) GPY08_RS13550 PF00703 Glycosyl hydrolases family 2 GPY08_RS13550 PF02836 Glycosyl hydrolases family 2, TIM barrel domain GPY08_RS13555 PF13407 Periplasmic binding protein domain GPY08_RS13560 PF00005 ABC transporter GPY08_RS13580 PF01970 Tripartite tricarboxylate transporter TctA family GPY08_RS13600 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GPY08_RS13600 PF02805 Metal binding domain of Ada GPY08_RS13600 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GPY08_RS13600 PF12833 Helix-turn-helix domain GPY08_RS13615 PF00285 Citrate synthase, C-terminal domain GPY08_RS13620 PF00330 Aconitase family (aconitate hydratase) GPY08_RS13620 PF00694 Aconitase C-terminal domain GPY08_RS13625 PF04303 PrpF protein GPY08_RS13630 PF13193 AMP-binding enzyme C-terminal domain GPY08_RS13630 PF00501 AMP-binding enzyme GPY08_RS13630 PF16177 Acetyl-coenzyme A synthetase N-terminus GPY08_RS13640 PF00529 HlyD membrane-fusion protein of T1SS GPY08_RS13640 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GPY08_RS13645 PF07690 Major Facilitator Superfamily GPY08_RS13665 PF00563 EAL domain GPY08_RS13665 PF12792 CSS motif domain associated with EAL GPY08_RS13670 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GPY08_RS13675 PF04209 homogentisate 1,2-dioxygenase GPY08_RS13685 PF14497 Glutathione S-transferase, C-terminal domain GPY08_RS13685 PF02798 Glutathione S-transferase, N-terminal domain GPY08_RS13705 PF04074 YhcH/YjgK/YiaL GPY08_RS13710 PF03009 Glycerophosphoryl diester phosphodiesterase family GPY08_RS13715 PF00455 DeoR C terminal sensor domain GPY08_RS13715 PF08220 DeoR-like helix-turn-helix domain GPY08_RS13720 PF00005 ABC transporter GPY08_RS13720 PF17912 MalK OB fold domain GPY08_RS13725 PF00528 Binding-protein-dependent transport system inner membrane component GPY08_RS13730 PF00528 Binding-protein-dependent transport system inner membrane component GPY08_RS13735 PF13416 Bacterial extracellular solute-binding protein GPY08_RS13745 PF00753 Metallo-beta-lactamase superfamily GPY08_RS13750 PF08212 Lipocalin-like domain GPY08_RS13760 PF01618 MotA/TolQ/ExbB proton channel family GPY08_RS13765 PF01618 MotA/TolQ/ExbB proton channel family GPY08_RS13770 PF02472 Biopolymer transport protein ExbD/TolR GPY08_RS13775 PF03544 Gram-negative bacterial TonB protein C-terminal GPY08_RS13790 PF01734 Patatin-like phospholipase GPY08_RS13795 PF14743 DNA ligase OB-like domain GPY08_RS13795 PF01068 ATP dependent DNA ligase domain GPY08_RS13810 PF00677 Lumazine binding domain GPY08_RS13830 PF00877 NlpC/P60 family GPY08_RS13835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY08_RS13835 PF02743 Cache domain GPY08_RS13835 PF00672 HAMP domain GPY08_RS13850 PF00480 ROK family GPY08_RS13860 PF03453 MoeA N-terminal region (domain I and II) GPY08_RS13860 PF03454 MoeA C-terminal region (domain IV) GPY08_RS13860 PF00994 Probable molybdopterin binding domain GPY08_RS13865 PF12804 MobA-like NTP transferase domain GPY08_RS13870 PF00005 ABC transporter GPY08_RS13870 PF08402 TOBE domain GPY08_RS13875 PF00528 Binding-protein-dependent transport system inner membrane component GPY08_RS13880 PF12849 PBP superfamily domain GPY08_RS13885 PF00072 Response regulator receiver domain GPY08_RS13885 PF00158 Sigma-54 interaction domain GPY08_RS13885 PF02954 Bacterial regulatory protein, Fis family GPY08_RS13890 PF00989 PAS fold GPY08_RS13890 PF00512 His Kinase A (phospho-acceptor) domain GPY08_RS13890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY08_RS13905 PF02634 FdhD/NarQ family GPY08_RS13925 PF02613 Nitrate reductase delta subunit GPY08_RS13935 PF01568 Molydopterin dinucleotide binding domain GPY08_RS13935 PF12838 4Fe-4S dicluster domain GPY08_RS13935 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GPY08_RS13935 PF00384 Molybdopterin oxidoreductase GPY08_RS13935 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region GPY08_RS13940 PF13247 4Fe-4S dicluster domain GPY08_RS13955 PF00909 Ammonium Transporter Family GPY08_RS13960 PF02146 Sir2 family GPY08_RS13965 PF13416 Bacterial extracellular solute-binding protein GPY08_RS13970 PF13416 Bacterial extracellular solute-binding protein GPY08_RS13975 PF00528 Binding-protein-dependent transport system inner membrane component GPY08_RS13980 PF00528 Binding-protein-dependent transport system inner membrane component GPY08_RS13985 PF08402 TOBE domain GPY08_RS13985 PF00005 ABC transporter GPY08_RS14005 PF01171 PP-loop family GPY08_RS14010 PF00582 Universal stress protein family GPY08_RS14015 PF00027 Cyclic nucleotide-binding domain GPY08_RS14015 PF13545 Crp-like helix-turn-helix domain GPY08_RS14030 PF00403 Heavy-metal-associated domain GPY08_RS14040 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP GPY08_RS14040 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GPY08_RS14055 PF00115 Cytochrome C and Quinol oxidase polypeptide I GPY08_RS14070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY08_RS14070 PF00512 His Kinase A (phospho-acceptor) domain GPY08_RS14070 PF00072 Response regulator receiver domain GPY08_RS14070 PF09308 LuxQ, periplasmic GPY08_RS14090 PF17414 MatP C-terminal ribbon-helix-helix domain GPY08_RS14090 PF06303 MatP N-terminal domain GPY08_RS14095 PF13654 AAA domain GPY08_RS14095 PF05362 Lon protease (S16) C-terminal proteolytic domain GPY08_RS14100 PF07977 FabA-like domain GPY08_RS14105 PF04957 Ribosome modulation factor GPY08_RS14125 PF01170 Putative RNA methylase family UPF0020 GPY08_RS14125 PF02926 THUMP domain GPY08_RS14125 PF10672 S-adenosylmethionine-dependent methyltransferase GPY08_RS14130 PF07126 Cell-division protein ZapC GPY08_RS14135 PF01180 Dihydroorotate dehydrogenase GPY08_RS14150 PF17432 Domain of unknown function (DUF3458_C) ARM repeats GPY08_RS14150 PF11940 Domain of unknown function (DUF3458) Ig-like fold GPY08_RS14150 PF01433 Peptidase family M1 domain GPY08_RS14165 PF11818 C-terminal domain of tail specific protease (DUF3340) GPY08_RS14165 PF00595 PDZ domain GPY08_RS14165 PF03572 Peptidase family S41 GPY08_RS14165 PF17804 Tail specific protease N-terminal domain GPY08_RS14175 PF13185 GAF domain GPY08_RS14185 PF04403 Paraquat-inducible protein A GPY08_RS14190 PF02470 MlaD protein GPY08_RS14195 PF01189 16S rRNA methyltransferase RsmB/F GPY08_RS14195 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF GPY08_RS14195 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF GPY08_RS14200 PF17783 CvfB-like winged helix domain GPY08_RS14200 PF13509 S1 domain GPY08_RS14215 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GPY08_RS14215 PF00391 PEP-utilising enzyme, mobile domain GPY08_RS14215 PF02896 PEP-utilising enzyme, TIM barrel domain GPY08_RS14220 PF00793 DAHP synthetase I family GPY08_RS14225 PF04461 Protein of unknown function (DUF520) GPY08_RS14230 PF01641 SelR domain GPY08_RS14245 PF01235 Sodium:alanine symporter family GPY08_RS14275 PF05638 Type VI secretion system effector, Hcp GPY08_RS14280 PF02074 Carboxypeptidase Taq (M32) metallopeptidase GPY08_RS14290 PF00270 DEAD/DEAH box helicase GPY08_RS14290 PF11898 Domain of unknown function (DUF3418) GPY08_RS14290 PF04408 Helicase associated domain (HA2) GPY08_RS14290 PF00271 Helicase conserved C-terminal domain GPY08_RS14290 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold GPY08_RS14295 PF02525 Flavodoxin-like fold GPY08_RS14305 PF03264 NapC/NirT cytochrome c family, N-terminal region GPY08_RS14330 PF00990 Diguanylate cyclase, GGDEF domain GPY08_RS14340 PF00012 Hsp70 protein GPY08_RS14345 PF00012 Hsp70 protein GPY08_RS14350 PF05230 MASE2 domain GPY08_RS14350 PF00990 Diguanylate cyclase, GGDEF domain GPY08_RS14360 PF00990 Diguanylate cyclase, GGDEF domain GPY08_RS14375 PF04399 Glutaredoxin 2, C terminal domain GPY08_RS14375 PF13417 Glutathione S-transferase, N-terminal domain GPY08_RS14385 PF07859 alpha/beta hydrolase fold GPY08_RS14395 PF00990 Diguanylate cyclase, GGDEF domain GPY08_RS14395 PF00072 Response regulator receiver domain GPY08_RS14415 PF03264 NapC/NirT cytochrome c family, N-terminal region GPY08_RS14420 PF06508 Queuosine biosynthesis protein QueC GPY08_RS14425 PF04055 Radical SAM superfamily GPY08_RS14435 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GPY08_RS14435 PF10414 Sirohaem synthase dimerisation region GPY08_RS14435 PF14824 Sirohaem biosynthesis protein central GPY08_RS14450 PF00528 Binding-protein-dependent transport system inner membrane component GPY08_RS14455 PF00005 ABC transporter GPY08_RS14460 PF01027 Inhibitor of apoptosis-promoting Bax1 GPY08_RS14465 PF04358 DsrC like protein GPY08_RS14470 PF00708 Acylphosphatase GPY08_RS14475 PF17785 PUA-like domain GPY08_RS14475 PF10672 S-adenosylmethionine-dependent methyltransferase GPY08_RS14480 PF06433 Methylamine dehydrogenase heavy chain (MADH) GPY08_RS14490 PF00578 AhpC/TSA family GPY08_RS14495 PF02975 Methylamine dehydrogenase, L chain GPY08_RS14500 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GPY08_RS14500 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP GPY08_RS14520 PF00141 Peroxidase GPY08_RS14525 PF00512 His Kinase A (phospho-acceptor) domain GPY08_RS14525 PF00672 HAMP domain GPY08_RS14525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY08_RS14535 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain GPY08_RS14535 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GPY08_RS14545 PF05552 Conserved TM helix GPY08_RS14545 PF00924 Mechanosensitive ion channel GPY08_RS14550 PF01699 Sodium/calcium exchanger protein GPY08_RS14565 PF08447 PAS fold GPY08_RS14565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY08_RS14565 PF13426 PAS domain GPY08_RS14580 PF00313 'Cold-shock' DNA-binding domain GPY08_RS14610 PF00589 Phage integrase family GPY08_RS14610 PF02899 Phage integrase, N-terminal SAM-like domain GPY08_RS14670 PF06892 Phage regulatory protein CII (CP76) GPY08_RS14700 PF05840 Bacteriophage replication gene A protein (GPA) GPY08_RS14845 PF04984 Phage tail sheath protein subtilisin-like domain GPY08_RS14845 PF17482 Phage tail sheath C-terminal domain GPY08_RS14885 PF00072 Response regulator receiver domain GPY08_RS14885 PF00990 Diguanylate cyclase, GGDEF domain GPY08_RS14900 PF01584 CheW-like domain GPY08_RS14900 PF00072 Response regulator receiver domain GPY08_RS14910 PF00072 Response regulator receiver domain GPY08_RS14910 PF12431 Transcriptional regulator GPY08_RS14915 PF17203 Single cache domain 3 GPY08_RS14915 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain GPY08_RS14915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY08_RS14915 PF00989 PAS fold GPY08_RS14930 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GPY08_RS14950 PF04204 Homoserine O-succinyltransferase GPY08_RS14965 PF05971 RNA methyltransferase GPY08_RS14970 PF01863 Protein of unknown function DUF45 GPY08_RS14980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS14980 PF03466 LysR substrate binding domain GPY08_RS15035 PF01032 FecCD transport family GPY08_RS15040 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family GPY08_RS15050 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase GPY08_RS15060 PF02277 Phosphoribosyltransferase GPY08_RS15065 PF01613 Flavin reductase like domain GPY08_RS15070 PF13460 NAD(P)H-binding GPY08_RS15085 PF00929 Exonuclease GPY08_RS15085 PF08411 Exonuclease C-terminal GPY08_RS15090 PF03788 LrgA family GPY08_RS15095 PF04172 LrgB-like family GPY08_RS15100 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GPY08_RS15100 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region GPY08_RS15105 PF13188 PAS domain GPY08_RS15105 PF00990 Diguanylate cyclase, GGDEF domain GPY08_RS15105 PF03707 Bacterial signalling protein N terminal repeat GPY08_RS15105 PF00563 EAL domain GPY08_RS15125 PF02222 ATP-grasp domain GPY08_RS15135 PF05724 Thiopurine S-methyltransferase (TPMT) GPY08_RS15145 PF00216 Bacterial DNA-binding protein GPY08_RS15150 PF03147 Ferredoxin-fold anticodon binding domain GPY08_RS15150 PF01588 Putative tRNA binding domain GPY08_RS15150 PF03483 B3/4 domain GPY08_RS15150 PF03484 tRNA synthetase B5 domain GPY08_RS15150 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain GPY08_RS15155 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain GPY08_RS15155 PF01409 tRNA synthetases class II core domain (F) GPY08_RS15165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS15165 PF03466 LysR substrate binding domain GPY08_RS15170 PF00072 Response regulator receiver domain GPY08_RS15170 PF00990 Diguanylate cyclase, GGDEF domain GPY08_RS15175 PF07995 Glucose / Sorbosone dehydrogenase GPY08_RS15200 PF01066 CDP-alcohol phosphatidyltransferase GPY08_RS15205 PF01541 GIY-YIG catalytic domain GPY08_RS15205 PF08459 UvrC Helix-hairpin-helix N-terminal GPY08_RS15205 PF02151 UvrB/uvrC motif GPY08_RS15210 PF00072 Response regulator receiver domain GPY08_RS15210 PF00196 Bacterial regulatory proteins, luxR family GPY08_RS15215 PF00136 DNA polymerase family B GPY08_RS15215 PF03104 DNA polymerase family B, exonuclease domain GPY08_RS15230 PF01132 Elongation factor P (EF-P) OB domain GPY08_RS15230 PF08207 Elongation factor P (EF-P) KOW-like domain GPY08_RS15230 PF09285 Elongation factor P, C-terminal GPY08_RS15235 PF04269 Protein of unknown function, DUF440 GPY08_RS15245 PF07702 UTRA domain GPY08_RS15245 PF00392 Bacterial regulatory proteins, gntR family GPY08_RS15250 PF01979 Amidohydrolase family GPY08_RS15255 PF00491 Arginase family GPY08_RS15260 PF17392 Urocanase C-terminal domain GPY08_RS15260 PF17391 Urocanase N-terminal domain GPY08_RS15260 PF01175 Urocanase Rossmann-like domain GPY08_RS15265 PF00221 Aromatic amino acid lyase GPY08_RS15280 PF04191 Phospholipid methyltransferase GPY08_RS15285 PF01565 FAD binding domain GPY08_RS15285 PF13183 4Fe-4S dicluster domain GPY08_RS15285 PF02913 FAD linked oxidases, C-terminal domain GPY08_RS15300 PF13488 Glycine zipper GPY08_RS15300 PF00691 OmpA family GPY08_RS15320 PF01259 SAICAR synthetase GPY08_RS15330 PF08482 ATP-dependent helicase C-terminal GPY08_RS15330 PF00270 DEAD/DEAH box helicase GPY08_RS15330 PF00271 Helicase conserved C-terminal domain GPY08_RS15330 PF04408 Helicase associated domain (HA2) GPY08_RS15335 PF03949 Malic enzyme, NAD binding domain GPY08_RS15335 PF00390 Malic enzyme, N-terminal domain GPY08_RS15350 PF00144 Beta-lactamase GPY08_RS15360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS15360 PF03466 LysR substrate binding domain GPY08_RS15380 PF13344 Haloacid dehalogenase-like hydrolase GPY08_RS15380 PF00293 NUDIX domain GPY08_RS15390 PF00376 MerR family regulatory protein GPY08_RS15390 PF09278 MerR, DNA binding GPY08_RS15400 PF02698 DUF218 domain GPY08_RS15410 PF01614 Bacterial transcriptional regulator GPY08_RS15410 PF09339 IclR helix-turn-helix domain GPY08_RS15415 PF01614 Bacterial transcriptional regulator GPY08_RS15415 PF09339 IclR helix-turn-helix domain GPY08_RS15420 PF00171 Aldehyde dehydrogenase family GPY08_RS15425 PF00465 Iron-containing alcohol dehydrogenase GPY08_RS15430 PF00266 Aminotransferase class-V GPY08_RS15450 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY08_RS15455 PF00664 ABC transporter transmembrane region GPY08_RS15455 PF00005 ABC transporter GPY08_RS15460 PF00005 ABC transporter GPY08_RS15460 PF00664 ABC transporter transmembrane region GPY08_RS15465 PF01551 Peptidase family M23 GPY08_RS15465 PF01476 LysM domain GPY08_RS15465 PF08525 Opacity-associated protein A N-terminal motif GPY08_RS15485 PF01479 S4 domain GPY08_RS15485 PF00849 RNA pseudouridylate synthase GPY08_RS15490 PF01300 Telomere recombination GPY08_RS15495 PF02811 PHP domain GPY08_RS15505 PF00425 chorismate binding enzyme GPY08_RS15505 PF04715 Anthranilate synthase component I, N terminal region GPY08_RS15510 PF00117 Glutamine amidotransferase class-I GPY08_RS15515 PF02885 Glycosyl transferase family, helical bundle domain GPY08_RS15515 PF00591 Glycosyl transferase family, a/b domain GPY08_RS15525 PF00291 Pyridoxal-phosphate dependent enzyme GPY08_RS15535 PF00375 Sodium:dicarboxylate symporter family GPY08_RS15545 PF04279 Intracellular septation protein A GPY08_RS15550 PF03061 Thioesterase superfamily GPY08_RS15555 PF03795 YCII-related domain GPY08_RS15565 PF08267 Cobalamin-independent synthase, N-terminal domain GPY08_RS15565 PF01717 Cobalamin-independent synthase, Catalytic domain GPY08_RS15585 PF00675 Insulinase (Peptidase family M16) GPY08_RS15585 PF05193 Peptidase M16 inactive domain GPY08_RS15605 PF02798 Glutathione S-transferase, N-terminal domain GPY08_RS15605 PF00043 Glutathione S-transferase, C-terminal domain GPY08_RS15615 PF00196 Bacterial regulatory proteins, luxR family GPY08_RS15615 PF00563 EAL domain GPY08_RS15620 PF12729 Four helix bundle sensory module for signal transduction GPY08_RS15620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY08_RS15620 PF00672 HAMP domain GPY08_RS15635 PF01177 Asp/Glu/Hydantoin racemase GPY08_RS15640 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GPY08_RS15645 PF00512 His Kinase A (phospho-acceptor) domain GPY08_RS15645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY08_RS15645 PF00672 HAMP domain GPY08_RS15645 PF00989 PAS fold GPY08_RS15650 PF00072 Response regulator receiver domain GPY08_RS15650 PF00486 Transcriptional regulatory protein, C terminal GPY08_RS15665 PF03358 NADPH-dependent FMN reductase GPY08_RS15670 PF00005 ABC transporter GPY08_RS15670 PF12848 ABC transporter GPY08_RS15675 PF04055 Radical SAM superfamily GPY08_RS15675 PF11842 Domain of unknown function (DUF3362) GPY08_RS15675 PF08497 Radical SAM N-terminal GPY08_RS15680 PF00266 Aminotransferase class-V GPY08_RS15690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY08_RS15690 PF00512 His Kinase A (phospho-acceptor) domain GPY08_RS15690 PF00989 PAS fold GPY08_RS15705 PF04994 TfoX C-terminal domain GPY08_RS15705 PF04993 TfoX N-terminal domain GPY08_RS15715 PF03956 Lysine exporter LysO GPY08_RS15725 PF00282 Pyridoxal-dependent decarboxylase conserved domain GPY08_RS15730 PF01418 Helix-turn-helix domain, rpiR family GPY08_RS15730 PF01380 SIS domain GPY08_RS15740 PF00462 Glutaredoxin GPY08_RS15745 PF06826 Predicted Permease Membrane Region GPY08_RS15745 PF02080 TrkA-C domain GPY08_RS15750 PF07055 Enoyl reductase FAD binding domain GPY08_RS15750 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase GPY08_RS15750 PF12241 Trans-2-enoyl-CoA reductase catalytic region GPY08_RS15760 PF00440 Bacterial regulatory proteins, tetR family GPY08_RS15760 PF16295 Tetracyclin repressor-like, C-terminal domain GPY08_RS15775 PF00171 Aldehyde dehydrogenase family GPY08_RS15830 PF06610 L-alanine exporter GPY08_RS15845 PF02445 Quinolinate synthetase A protein GPY08_RS15850 PF13174 Tetratricopeptide repeat GPY08_RS15850 PF16331 TolA binding protein trimerisation GPY08_RS15855 PF00691 OmpA family GPY08_RS15870 PF02472 Biopolymer transport protein ExbD/TolR GPY08_RS15875 PF01618 MotA/TolQ/ExbB proton channel family GPY08_RS15880 PF03061 Thioesterase superfamily GPY08_RS15890 PF08173 Membrane bound YbgT-like protein GPY08_RS15895 PF02322 Cytochrome bd terminal oxidase subunit II GPY08_RS15900 PF01654 Cytochrome bd terminal oxidase subunit I GPY08_RS15905 PF17864 RuvB AAA lid domain GPY08_RS15905 PF05491 RuvB C-terminal winged helix domain GPY08_RS15905 PF05496 Holliday junction DNA helicase RuvB P-loop domain GPY08_RS15915 PF02075 Crossover junction endodeoxyribonuclease RuvC GPY08_RS15920 PF09190 DALR domain GPY08_RS15920 PF01406 tRNA synthetases class I (C) catalytic domain GPY08_RS15925 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GPY08_RS15930 PF00149 Calcineurin-like phosphoesterase GPY08_RS15935 PF08668 HDOD domain GPY08_RS15935 PF00563 EAL domain GPY08_RS15940 PF02810 SEC-C motif GPY08_RS15950 PF13609 Gram-negative porin GPY08_RS15955 PF06733 DEAD_2 GPY08_RS15955 PF13307 Helicase C-terminal domain GPY08_RS15960 PF07445 Primosomal replication protein priC GPY08_RS15965 PF10689 Protein of unknown function (DUF2496) GPY08_RS15970 PF00672 HAMP domain GPY08_RS15970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY08_RS15975 PF03372 Endonuclease/Exonuclease/phosphatase family GPY08_RS15985 PF00528 Binding-protein-dependent transport system inner membrane component GPY08_RS15990 PF00528 Binding-protein-dependent transport system inner membrane component GPY08_RS15995 PF00497 Bacterial extracellular solute-binding proteins, family 3 GPY08_RS16000 PF00005 ABC transporter GPY08_RS16010 PF01228 Glycine radical GPY08_RS16010 PF02901 Pyruvate formate lyase-like GPY08_RS16020 PF00672 HAMP domain GPY08_RS16020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY08_RS16025 PF04055 Radical SAM superfamily GPY08_RS16045 PF08298 PrkA AAA domain GPY08_RS16045 PF06798 PrkA serine protein kinase C-terminal domain GPY08_RS16050 PF04285 Protein of unknown function (DUF444) GPY08_RS16055 PF04293 SpoVR like protein GPY08_RS16060 PF02348 Cytidylyltransferase GPY08_RS16065 PF03966 Trm112p-like protein GPY08_RS16070 PF02606 Tetraacyldisaccharide-1-P 4'-kinase GPY08_RS16075 PF00664 ABC transporter transmembrane region GPY08_RS16075 PF00005 ABC transporter GPY08_RS16080 PF00753 Metallo-beta-lactamase superfamily GPY08_RS16080 PF03772 Competence protein GPY08_RS16080 PF13567 Domain of unknown function (DUF4131) GPY08_RS16090 PF12704 MacB-like periplasmic core domain GPY08_RS16090 PF02687 FtsX-like permease family GPY08_RS16095 PF00005 ABC transporter GPY08_RS16110 PF02559 CarD-like/TRCF domain GPY08_RS16110 PF00270 DEAD/DEAH box helicase GPY08_RS16110 PF00271 Helicase conserved C-terminal domain GPY08_RS16110 PF17757 UvrB interaction domain GPY08_RS16110 PF03461 TRCF domain GPY08_RS16125 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY08_RS16135 PF01636 Phosphotransferase enzyme family GPY08_RS16140 PF13036 Peptidoglycan-synthase activator LpoB GPY08_RS16140 PF08139 Prokaryotic membrane lipoprotein lipid attachment site GPY08_RS16155 PF01230 HIT domain GPY08_RS16160 PF00672 HAMP domain GPY08_RS16160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY08_RS16170 PF07840 FadR C-terminal domain GPY08_RS16170 PF00392 Bacterial regulatory proteins, gntR family GPY08_RS16175 PF06450 Bacterial Na+/H+ antiporter B (NhaB) GPY08_RS16180 PF02600 Disulfide bond formation protein DsbB GPY08_RS16190 PF01037 Lrp/AsnC ligand binding domain GPY08_RS16195 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GPY08_RS16195 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GPY08_RS16205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS16205 PF03466 LysR substrate binding domain GPY08_RS16215 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) GPY08_RS16225 PF18073 Rubredoxin metal binding domain GPY08_RS16230 PF06305 Lipopolysaccharide assembly protein A domain GPY08_RS16240 PF00575 S1 RNA binding domain GPY08_RS16245 PF02224 Cytidylate kinase GPY08_RS16255 PF13145 PPIC-type PPIASE domain GPY08_RS16260 PF00216 Bacterial DNA-binding protein GPY08_RS16265 PF02190 ATP-dependent protease La (LON) substrate-binding domain GPY08_RS16265 PF05362 Lon protease (S16) C-terminal proteolytic domain GPY08_RS16265 PF00004 ATPase family associated with various cellular activities (AAA) GPY08_RS16270 PF07724 AAA domain (Cdc48 subfamily) GPY08_RS16270 PF10431 C-terminal, D2-small domain, of ClpB protein GPY08_RS16270 PF06689 ClpX C4-type zinc finger GPY08_RS16275 PF00574 Clp protease GPY08_RS16280 PF05698 Bacterial trigger factor protein (TF) C-terminus GPY08_RS16280 PF05697 Bacterial trigger factor protein (TF) GPY08_RS16280 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GPY08_RS16290 PF00072 Response regulator receiver domain GPY08_RS16290 PF00158 Sigma-54 interaction domain GPY08_RS16290 PF02954 Bacterial regulatory protein, Fis family GPY08_RS16295 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GPY08_RS16300 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component GPY08_RS16305 PF03480 Bacterial extracellular solute-binding protein, family 7 GPY08_RS16310 PF05922 Peptidase inhibitor I9 GPY08_RS16310 PF00082 Subtilase family GPY08_RS16315 PF01547 Bacterial extracellular solute-binding protein GPY08_RS16320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY08_RS16320 PF00512 His Kinase A (phospho-acceptor) domain GPY08_RS16320 PF00672 HAMP domain GPY08_RS16325 PF00072 Response regulator receiver domain GPY08_RS16325 PF00486 Transcriptional regulatory protein, C terminal GPY08_RS16330 PF02696 Uncharacterized ACR, YdiU/UPF0061 family GPY08_RS16335 PF03313 Serine dehydratase alpha chain GPY08_RS16335 PF03315 Serine dehydratase beta chain GPY08_RS16345 PF00583 Acetyltransferase (GNAT) family GPY08_RS16345 PF00795 Carbon-nitrogen hydrolase GPY08_RS16355 PF00498 FHA domain GPY08_RS16355 PF00563 EAL domain GPY08_RS16355 PF00990 Diguanylate cyclase, GGDEF domain GPY08_RS16375 PF00175 Oxidoreductase NAD-binding domain GPY08_RS16375 PF00970 Oxidoreductase FAD-binding domain GPY08_RS16400 PF00072 Response regulator receiver domain GPY08_RS16400 PF00196 Bacterial regulatory proteins, luxR family GPY08_RS16405 PF05231 MASE1 GPY08_RS16405 PF07730 Histidine kinase GPY08_RS16405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY08_RS16410 PF07690 Major Facilitator Superfamily GPY08_RS16420 PF00528 Binding-protein-dependent transport system inner membrane component GPY08_RS16450 PF12462 DNA helicase IV / RNA helicase N terminal GPY08_RS16450 PF00580 UvrD/REP helicase N-terminal domain GPY08_RS16450 PF13361 UvrD-like helicase C-terminal domain GPY08_RS16455 PF00580 UvrD/REP helicase N-terminal domain GPY08_RS16455 PF12462 DNA helicase IV / RNA helicase N terminal GPY08_RS16455 PF13361 UvrD-like helicase C-terminal domain GPY08_RS16495 PF01381 Helix-turn-helix GPY08_RS16505 PF07804 HipA-like C-terminal domain GPY08_RS16505 PF13657 HipA N-terminal domain GPY08_RS16520 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) GPY08_RS16535 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GPY08_RS16535 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GPY08_RS16540 PF01773 Na+ dependent nucleoside transporter N-terminus GPY08_RS16540 PF07662 Na+ dependent nucleoside transporter C-terminus GPY08_RS16540 PF07670 Nucleoside recognition GPY08_RS16545 PF03466 LysR substrate binding domain GPY08_RS16545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS16550 PF13406 Transglycosylase SLT domain GPY08_RS16555 PF05166 YcgL domain GPY08_RS16560 PF03775 Septum formation inhibitor MinC, C-terminal domain GPY08_RS16560 PF05209 Septum formation inhibitor MinC, N-terminal domain GPY08_RS16565 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GPY08_RS16570 PF03776 Septum formation topological specificity factor MinE GPY08_RS16580 PF00570 HRDC domain GPY08_RS16580 PF01612 3'-5' exonuclease GPY08_RS16585 PF13193 AMP-binding enzyme C-terminal domain GPY08_RS16585 PF00501 AMP-binding enzyme GPY08_RS16605 PF00814 Glycoprotease family GPY08_RS16610 PF13307 Helicase C-terminal domain GPY08_RS16610 PF04851 Type III restriction enzyme, res subunit GPY08_RS16620 PF01842 ACT domain GPY08_RS16620 PF00551 Formyl transferase GPY08_RS16635 PF17763 Glutaminase/Asparaginase C-terminal domain GPY08_RS16635 PF00710 Asparaginase, N-terminal GPY08_RS16640 PF07023 Protein of unknown function (DUF1315) GPY08_RS16650 PF01641 SelR domain GPY08_RS16655 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GPY08_RS16655 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GPY08_RS16660 PF01263 Aldose 1-epimerase GPY08_RS16665 PF13847 Methyltransferase domain GPY08_RS16835 PF12441 CopG antitoxin of type II toxin-antitoxin system GPY08_RS16900 PF06892 Phage regulatory protein CII (CP76) GPY08_RS16925 PF03119 NAD-dependent DNA ligase C4 zinc finger domain GPY08_RS16925 PF03120 NAD-dependent DNA ligase OB-fold domain GPY08_RS16925 PF12826 Helix-hairpin-helix motif GPY08_RS16925 PF00533 BRCA1 C Terminus (BRCT) domain GPY08_RS16925 PF01653 NAD-dependent DNA ligase adenylation domain GPY08_RS16940 PF02899 Phage integrase, N-terminal SAM-like domain GPY08_RS16940 PF00589 Phage integrase family GPY08_RS16945 PF03692 Putative zinc- or iron-chelating domain GPY08_RS16950 PF03692 Putative zinc- or iron-chelating domain GPY08_RS16955 PF00230 Major intrinsic protein GPY08_RS16960 PF13662 Toprim domain GPY08_RS16960 PF02132 RecR protein GPY08_RS16965 PF02575 YbaB/EbfC DNA-binding family GPY08_RS16970 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding GPY08_RS16970 PF12169 DNA polymerase III subunits gamma and tau domain III GPY08_RS16970 PF12170 DNA polymerase III tau subunit V interacting with alpha GPY08_RS16975 PF00156 Phosphoribosyl transferase domain GPY08_RS16980 PF04304 Protein of unknown function (DUF454) GPY08_RS16990 PF00072 Response regulator receiver domain GPY08_RS16995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS16995 PF03466 LysR substrate binding domain GPY08_RS17000 PF00881 Nitroreductase family GPY08_RS17005 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GPY08_RS17005 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GPY08_RS17005 PF00378 Enoyl-CoA hydratase/isomerase GPY08_RS17010 PF02803 Thiolase, C-terminal domain GPY08_RS17010 PF00108 Thiolase, N-terminal domain GPY08_RS17025 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) GPY08_RS17030 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) GPY08_RS17035 PF01451 Low molecular weight phosphotyrosine protein phosphatase GPY08_RS17045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY08_RS17045 PF08447 PAS fold GPY08_RS17045 PF13426 PAS domain GPY08_RS17050 PF12557 Cob(I)alamin adenosyltransferase N terminal GPY08_RS17050 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP GPY08_RS17055 PF05170 AsmA family GPY08_RS17060 PF00485 Phosphoribulokinase / Uridine kinase family GPY08_RS17065 PF10609 NUBPL iron-transfer P-loop NTPase GPY08_RS17070 PF09334 tRNA synthetases class I (M) GPY08_RS17070 PF01588 Putative tRNA binding domain GPY08_RS17080 PF01048 Phosphorylase superfamily GPY08_RS17085 PF00403 Heavy-metal-associated domain GPY08_RS17090 PF00571 CBS domain GPY08_RS17090 PF00478 IMP dehydrogenase / GMP reductase domain GPY08_RS17095 PF00990 Diguanylate cyclase, GGDEF domain GPY08_RS17095 PF08448 PAS fold GPY08_RS17100 PF02391 MoaE protein GPY08_RS17105 PF02597 ThiS family GPY08_RS17110 PF01967 MoaC family GPY08_RS17115 PF00994 Probable molybdopterin binding domain GPY08_RS17120 PF04055 Radical SAM superfamily GPY08_RS17120 PF06463 Molybdenum Cofactor Synthesis C GPY08_RS17125 PF01933 Uncharacterised protein family UPF0052 GPY08_RS17130 PF01627 Hpt domain GPY08_RS17135 PF00072 Response regulator receiver domain GPY08_RS17135 PF00158 Sigma-54 interaction domain GPY08_RS17135 PF02954 Bacterial regulatory protein, Fis family GPY08_RS17140 PF17757 UvrB interaction domain GPY08_RS17140 PF12344 Ultra-violet resistance protein B GPY08_RS17140 PF02151 UvrB/uvrC motif GPY08_RS17140 PF04851 Type III restriction enzyme, res subunit GPY08_RS17140 PF00271 Helicase conserved C-terminal domain GPY08_RS17155 PF16123 Hydroxyacylglutathione hydrolase C-terminus GPY08_RS17155 PF00753 Metallo-beta-lactamase superfamily GPY08_RS17160 PF02508 Rnf-Nqr subunit, membrane protein GPY08_RS17165 PF04060 Putative Fe-S cluster GPY08_RS17170 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit GPY08_RS17170 PF12838 4Fe-4S dicluster domain GPY08_RS17170 PF13375 RnfC Barrel sandwich hybrid domain GPY08_RS17170 PF10531 SLBB domain GPY08_RS17175 PF03116 NQR2, RnfD, RnfE family GPY08_RS17190 PF10576 Iron-sulfur binding domain of endonuclease III GPY08_RS17190 PF00730 HhH-GPD superfamily base excision DNA repair protein GPY08_RS17190 PF00633 Helix-hairpin-helix motif GPY08_RS17195 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GPY08_RS17200 PF10952 Protein of unknown function (DUF2753) GPY08_RS17205 PF18393 MotY N-terminal domain GPY08_RS17205 PF00691 OmpA family GPY08_RS17210 PF00929 Exonuclease GPY08_RS17215 PF03553 Na+/H+ antiporter family GPY08_RS17215 PF13726 Na+-H+ antiporter family GPY08_RS17220 PF00156 Phosphoribosyl transferase domain GPY08_RS17225 PF02674 Colicin V production protein GPY08_RS17230 PF05036 Sporulation related domain GPY08_RS17235 PF02875 Mur ligase family, glutamate ligase domain GPY08_RS17235 PF08245 Mur ligase middle domain GPY08_RS17240 PF01039 Carboxyl transferase domain GPY08_RS17240 PF17848 Acetyl-coA carboxylase zinc finger domain GPY08_RS17245 PF01416 tRNA pseudouridine synthase GPY08_RS17255 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain GPY08_RS17255 PF00749 tRNA synthetases class I (E and Q), catalytic domain GPY08_RS17260 PF02378 Phosphotransferase system, EIIC GPY08_RS17260 PF00367 phosphotransferase system, EIIB GPY08_RS17260 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GPY08_RS17265 PF01979 Amidohydrolase family GPY08_RS17270 PF00480 ROK family GPY08_RS17270 PF01047 MarR family GPY08_RS17275 PF00999 Sodium/hydrogen exchanger family GPY08_RS17275 PF02254 TrkA-N domain GPY08_RS17280 PF00733 Asparagine synthase GPY08_RS17280 PF13537 Glutamine amidotransferase domain GPY08_RS17285 PF02357 Transcription termination factor nusG GPY08_RS17290 PF00854 POT family GPY08_RS17295 PF00762 Ferrochelatase GPY08_RS17300 PF05191 Adenylate kinase, active site lid GPY08_RS17305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY08_RS17305 PF00183 Hsp90 protein GPY08_RS17315 PF17323 Trans-membrane regulatory protein ToxS GPY08_RS17325 PF12850 Calcineurin-like phosphoesterase superfamily domain GPY08_RS17340 PF07556 Protein of unknown function (DUF1538) GPY08_RS17345 PF07556 Protein of unknown function (DUF1538) GPY08_RS17350 PF08338 Domain of unknown function (DUF1731) GPY08_RS17350 PF01370 NAD dependent epimerase/dehydratase family GPY08_RS17355 PF00106 short chain dehydrogenase GPY08_RS17365 PF00085 Thioredoxin GPY08_RS17370 PF01145 SPFH domain / Band 7 family GPY08_RS17370 PF16200 C-terminal region of band_7 GPY08_RS17380 PF13411 MerR HTH family regulatory protein GPY08_RS17390 PF13609 Gram-negative porin GPY08_RS17395 PF03119 NAD-dependent DNA ligase C4 zinc finger domain GPY08_RS17395 PF03120 NAD-dependent DNA ligase OB-fold domain GPY08_RS17395 PF12826 Helix-hairpin-helix motif GPY08_RS17395 PF01653 NAD-dependent DNA ligase adenylation domain GPY08_RS17395 PF00533 BRCA1 C Terminus (BRCT) domain GPY08_RS17400 PF04354 ZipA, C-terminal FtsZ-binding domain GPY08_RS17410 PF00291 Pyridoxal-phosphate dependent enzyme GPY08_RS17420 PF00381 PTS HPr component phosphorylation site GPY08_RS17425 PF05524 PEP-utilising enzyme, N-terminal GPY08_RS17425 PF00391 PEP-utilising enzyme, mobile domain GPY08_RS17425 PF02896 PEP-utilising enzyme, TIM barrel domain GPY08_RS17430 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GPY08_RS17435 PF01494 FAD binding domain GPY08_RS17440 PF00919 Uncharacterized protein family UPF0004 GPY08_RS17440 PF01938 TRAM domain GPY08_RS17440 PF04055 Radical SAM superfamily GPY08_RS17445 PF02562 PhoH-like protein GPY08_RS17450 PF02130 Uncharacterized protein family UPF0054 GPY08_RS17455 PF00571 CBS domain GPY08_RS17455 PF03471 Transporter associated domain GPY08_RS17465 PF07295 Zinc-ribbon containing domain GPY08_RS17470 PF00133 tRNA synthetases class I (I, L, M and V) GPY08_RS17470 PF08264 Anticodon-binding domain of tRNA GPY08_RS17470 PF13603 Leucyl-tRNA synthetase, Domain 2 GPY08_RS17475 PF04390 Lipopolysaccharide-assembly GPY08_RS17490 PF02590 Predicted SPOUT methyltransferase GPY08_RS17495 PF00905 Penicillin binding protein transpeptidase domain GPY08_RS17495 PF03717 Penicillin-binding Protein dimerisation domain GPY08_RS17500 PF01098 Cell cycle protein GPY08_RS17505 PF05036 Sporulation related domain GPY08_RS17505 PF03330 Lytic transglycolase GPY08_RS17510 PF00768 D-alanyl-D-alanine carboxypeptidase GPY08_RS17510 PF07943 Penicillin-binding protein 5, C-terminal domain GPY08_RS17515 PF04359 Protein of unknown function (DUF493) GPY08_RS17520 PF03099 Biotin/lipoate A/B protein ligase family GPY08_RS17525 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family GPY08_RS17525 PF04055 Radical SAM superfamily GPY08_RS17535 PF00464 Serine hydroxymethyltransferase GPY08_RS17545 PF00873 AcrB/AcrD/AcrF family GPY08_RS17550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GPY08_RS17575 PF00128 Alpha amylase, catalytic domain GPY08_RS17575 PF16657 Maltogenic Amylase, C-terminal domain GPY08_RS17580 PF02378 Phosphotransferase system, EIIC GPY08_RS17580 PF00367 phosphotransferase system, EIIB GPY08_RS17585 PF00356 Bacterial regulatory proteins, lacI family GPY08_RS17600 PF09383 NIL domain GPY08_RS17600 PF00005 ABC transporter GPY08_RS17610 PF03180 NLPA lipoprotein GPY08_RS17615 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) GPY08_RS17620 PF07348 Syd protein (SUKH-2) GPY08_RS17635 PF00990 Diguanylate cyclase, GGDEF domain GPY08_RS17635 PF00072 Response regulator receiver domain GPY08_RS17640 PF11892 Domain of unknown function (DUF3412) GPY08_RS17640 PF03641 Possible lysine decarboxylase GPY08_RS17640 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases GPY08_RS17645 PF01367 5'-3' exonuclease, C-terminal SAM fold GPY08_RS17645 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GPY08_RS17650 PF18125 RlmM ferredoxin-like domain GPY08_RS17650 PF01728 FtsJ-like methyltransferase GPY08_RS17655 PF04241 Protein of unknown function (DUF423) GPY08_RS17665 PF03466 LysR substrate binding domain GPY08_RS17665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS17670 PF02568 Thiamine biosynthesis protein (ThiI) GPY08_RS17670 PF02926 THUMP domain GPY08_RS17675 PF13677 Membrane MotB of proton-channel complex MotA/MotB GPY08_RS17675 PF00691 OmpA family GPY08_RS17680 PF01618 MotA/TolQ/ExbB proton channel family GPY08_RS17685 PF02609 Exonuclease VII small subunit GPY08_RS17690 PF00348 Polyprenyl synthetase GPY08_RS17695 PF02780 Transketolase, C-terminal domain GPY08_RS17695 PF13292 1-deoxy-D-xylulose-5-phosphate synthase GPY08_RS17695 PF02779 Transketolase, pyrimidine binding domain GPY08_RS17700 PF00849 RNA pseudouridylate synthase GPY08_RS17705 PF04287 tRNA pseudouridine synthase C GPY08_RS17730 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 GPY08_RS17735 PF03806 AbgT putative transporter family GPY08_RS17740 PF00444 Ribosomal protein L36 GPY08_RS17745 PF01197 Ribosomal protein L31 GPY08_RS17750 PF01980 tRNA-methyltransferase O GPY08_RS17750 PF18389 TrmO C-terminal domain GPY08_RS17755 PF03129 Anticodon binding domain GPY08_RS17755 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GPY08_RS17755 PF04073 Aminoacyl-tRNA editing domain GPY08_RS17765 PF06786 Uncharacterised protein family (UPF0253) GPY08_RS17775 PF02769 AIR synthase related protein, C-terminal domain GPY08_RS17775 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain GPY08_RS17775 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal GPY08_RS17780 PF00497 Bacterial extracellular solute-binding proteins, family 3 GPY08_RS17780 PF01464 Transglycosylase SLT domain GPY08_RS17785 PF14437 MafB19-like deaminase GPY08_RS17795 PF00107 Zinc-binding dehydrogenase GPY08_RS17795 PF08240 Alcohol dehydrogenase GroES-like domain GPY08_RS17800 PF00756 Putative esterase GPY08_RS17805 PF03806 AbgT putative transporter family GPY08_RS17830 PF07963 Prokaryotic N-terminal methylation motif GPY08_RS17835 PF00226 DnaJ domain GPY08_RS17835 PF01556 DnaJ C terminal domain GPY08_RS17835 PF00684 DnaJ central domain GPY08_RS17840 PF00012 Hsp70 protein GPY08_RS17845 PF00375 Sodium:dicarboxylate symporter family GPY08_RS17850 PF01025 GrpE GPY08_RS17855 PF01513 ATP-NAD kinase GPY08_RS17860 PF02463 RecF/RecN/SMC N terminal domain GPY08_RS17865 PF04355 SmpA / OmlA family GPY08_RS17870 PF03658 RnfH family Ubiquitin GPY08_RS17875 PF03364 Polyketide cyclase / dehydrase and lipid transport GPY08_RS17880 PF01668 SmpB protein GPY08_RS17895 PF04851 Type III restriction enzyme, res subunit GPY08_RS17895 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) GPY08_RS17895 PF00271 Helicase conserved C-terminal domain GPY08_RS17895 PF08463 EcoEI R protein C-terminal GPY08_RS17905 PF12161 HsdM N-terminal domain GPY08_RS17905 PF02384 N-6 DNA Methylase GPY08_RS17915 PF03466 LysR substrate binding domain GPY08_RS17915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS17920 PF01266 FAD dependent oxidoreductase GPY08_RS17925 PF01235 Sodium:alanine symporter family GPY08_RS17930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS17930 PF03466 LysR substrate binding domain GPY08_RS17940 PF07690 Major Facilitator Superfamily GPY08_RS17945 PF01758 Sodium Bile acid symporter family GPY08_RS17950 PF01184 GPR1/FUN34/yaaH family GPY08_RS17955 PF06483 Chitinase C GPY08_RS17955 PF06483 Chitinase C GPY08_RS17955 PF00704 Glycosyl hydrolases family 18 GPY08_RS17955 PF00704 Glycosyl hydrolases family 18 GPY08_RS17960 PF00117 Glutamine amidotransferase class-I GPY08_RS17960 PF00958 GMP synthase C terminal domain GPY08_RS17960 PF02540 NAD synthase GPY08_RS17965 PF00571 CBS domain GPY08_RS17965 PF00478 IMP dehydrogenase / GMP reductase domain GPY08_RS17970 PF02601 Exonuclease VII, large subunit GPY08_RS17970 PF13742 OB-fold nucleic acid binding domain GPY08_RS17985 PF01926 50S ribosome-binding GTPase GPY08_RS17985 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal GPY08_RS17990 PF13360 PQQ-like domain GPY08_RS17995 PF09976 Tetratricopeptide repeat-like domain GPY08_RS18000 PF13393 Histidyl-tRNA synthetase GPY08_RS18000 PF03129 Anticodon binding domain GPY08_RS18010 PF13464 Domain of unknown function (DUF4115) GPY08_RS18015 PF04055 Radical SAM superfamily GPY08_RS18020 PF00334 Nucleoside diphosphate kinase GPY08_RS18025 PF00883 Cytosol aminopeptidase family, catalytic domain GPY08_RS18025 PF12404 Peptidase GPY08_RS18030 PF04384 Iron-sulphur cluster assembly GPY08_RS18035 PF00111 2Fe-2S iron-sulfur cluster binding domain GPY08_RS18040 PF00012 Hsp70 protein GPY08_RS18045 PF00226 DnaJ domain GPY08_RS18045 PF07743 HSCB C-terminal oligomerisation domain GPY08_RS18050 PF01521 Iron-sulphur cluster biosynthesis GPY08_RS18055 PF01592 NifU-like N terminal domain GPY08_RS18060 PF00266 Aminotransferase class-V GPY08_RS18065 PF02082 Transcriptional regulator GPY08_RS18070 PF00588 SpoU rRNA Methylase family GPY08_RS18075 PF00459 Inositol monophosphatase family GPY08_RS18085 PF07549 SecD/SecF GG Motif GPY08_RS18085 PF02355 Protein export membrane protein GPY08_RS18090 PF13721 SecD export protein N-terminal TM region GPY08_RS18090 PF07549 SecD/SecF GG Motif GPY08_RS18090 PF02355 Protein export membrane protein GPY08_RS18095 PF02699 Preprotein translocase subunit GPY08_RS18100 PF01702 Queuine tRNA-ribosyltransferase GPY08_RS18110 PF00571 CBS domain GPY08_RS18115 PF00463 Isocitrate lyase family GPY08_RS18125 PF03466 LysR substrate binding domain GPY08_RS18125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS18130 PF10417 C-terminal domain of 1-Cys peroxiredoxin GPY08_RS18130 PF00578 AhpC/TSA family GPY08_RS18135 PF03932 CutC family GPY08_RS18140 PF03976 Polyphosphate kinase 2 (PPK2) GPY08_RS18145 PF01895 PhoU domain GPY08_RS18150 PF00005 ABC transporter GPY08_RS18160 PF00528 Binding-protein-dependent transport system inner membrane component GPY08_RS18165 PF17941 Polyphosphate kinase C-terminal domain 1 GPY08_RS18165 PF13090 Polyphosphate kinase C-terminal domain 2 GPY08_RS18165 PF13089 Polyphosphate kinase N-terminal domain GPY08_RS18165 PF02503 Polyphosphate kinase middle domain GPY08_RS18170 PF02541 Ppx/GppA phosphatase family GPY08_RS18175 PF12849 PBP superfamily domain GPY08_RS18180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY08_RS18180 PF00512 His Kinase A (phospho-acceptor) domain GPY08_RS18180 PF00989 PAS fold GPY08_RS18180 PF11808 Phosphate regulon sensor protein PhoR GPY08_RS18185 PF00486 Transcriptional regulatory protein, C terminal GPY08_RS18185 PF00072 Response regulator receiver domain GPY08_RS18190 PF04381 Putative exonuclease, RdgC GPY08_RS18200 PF12838 4Fe-4S dicluster domain GPY08_RS18215 PF04545 Sigma-70, region 4 GPY08_RS18215 PF04542 Sigma-70 region 2 GPY08_RS18225 PF03502 Nucleoside-specific channel-forming protein, Tsx GPY08_RS18230 PF08546 Ketopantoate reductase PanE/ApbA C terminal GPY08_RS18230 PF02558 Ketopantoate reductase PanE/ApbA GPY08_RS18235 PF01965 DJ-1/PfpI family GPY08_RS18240 PF00266 Aminotransferase class-V GPY08_RS18250 PF02657 Fe-S metabolism associated domain GPY08_RS18255 PF00899 ThiF family GPY08_RS18260 PF03562 MltA specific insert domain GPY08_RS18260 PF06725 3D domain GPY08_RS18270 PF00696 Amino acid kinase family GPY08_RS18270 PF00583 Acetyltransferase (GNAT) family GPY08_RS18285 PF13361 UvrD-like helicase C-terminal domain GPY08_RS18285 PF00580 UvrD/REP helicase N-terminal domain GPY08_RS18285 PF12705 PD-(D/E)XK nuclease superfamily GPY08_RS18300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS18300 PF03466 LysR substrate binding domain GPY08_RS18305 PF07130 YebG protein GPY08_RS18310 PF14602 Hexapeptide repeat of succinyl-transferase GPY08_RS18310 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle GPY08_RS18315 PF00962 Adenosine/AMP deaminase GPY08_RS18330 PF02080 TrkA-C domain GPY08_RS18330 PF18030 RimK PreATP-grasp domain GPY08_RS18330 PF08443 RimK-like ATP-grasp domain GPY08_RS18335 PF01544 CorA-like Mg2+ transporter protein GPY08_RS18345 PF01588 Putative tRNA binding domain GPY08_RS18350 PF01263 Aldose 1-epimerase GPY08_RS18370 PF11849 Domain of unknown function (DUF3369) GPY08_RS18390 PF00437 Type II/IV secretion system protein GPY08_RS18420 PF13629 Pilus formation protein N terminal region GPY08_RS18420 PF00263 Bacterial type II and III secretion system protein GPY08_RS18420 PF04972 BON domain GPY08_RS18445 PF02311 AraC-like ligand binding domain GPY08_RS18445 PF12833 Helix-turn-helix domain GPY08_RS18460 PF03466 LysR substrate binding domain GPY08_RS18460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS18470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS18470 PF03466 LysR substrate binding domain GPY08_RS18475 PF00009 Elongation factor Tu GTP binding domain GPY08_RS18475 PF00679 Elongation factor G C-terminus GPY08_RS18475 PF14492 Elongation Factor G, domain II GPY08_RS18475 PF03764 Elongation factor G, domain IV GPY08_RS18475 PF03144 Elongation factor Tu domain 2 GPY08_RS18480 PF18073 Rubredoxin metal binding domain GPY08_RS18490 PF18429 Domain of unknown function (DUF5609) GPY08_RS18500 PF01048 Phosphorylase superfamily GPY08_RS18505 PF01676 Metalloenzyme superfamily GPY08_RS18515 PF01791 DeoC/LacD family aldolase GPY08_RS18520 PF07670 Nucleoside recognition GPY08_RS18520 PF07662 Na+ dependent nucleoside transporter C-terminus GPY08_RS18520 PF01773 Na+ dependent nucleoside transporter N-terminus GPY08_RS18545 PF01026 TatD related DNase GPY08_RS18555 PF01235 Sodium:alanine symporter family GPY08_RS18570 PF03167 Uracil DNA glycosylase superfamily GPY08_RS18580 PF01261 Xylose isomerase-like TIM barrel GPY08_RS18585 PF01228 Glycine radical GPY08_RS18590 PF00291 Pyridoxal-phosphate dependent enzyme GPY08_RS18590 PF14821 Threonine synthase N terminus GPY08_RS18600 PF00742 Homoserine dehydrogenase GPY08_RS18600 PF13840 ACT domain GPY08_RS18600 PF00696 Amino acid kinase family GPY08_RS18600 PF01842 ACT domain GPY08_RS18600 PF03447 Homoserine dehydrogenase, NAD binding domain GPY08_RS18610 PF03737 Aldolase/RraA GPY08_RS18625 PF00072 Response regulator receiver domain GPY08_RS18625 PF00486 Transcriptional regulatory protein, C terminal GPY08_RS18635 PF18415 Histidine kinase receptor ArcB trans-membrane domain GPY08_RS18635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY08_RS18635 PF01627 Hpt domain GPY08_RS18635 PF00989 PAS fold GPY08_RS18635 PF00512 His Kinase A (phospho-acceptor) domain GPY08_RS18635 PF00072 Response regulator receiver domain GPY08_RS18645 PF16199 Radical_SAM C-terminal domain GPY08_RS18645 PF04055 Radical SAM superfamily GPY08_RS18655 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GPY08_RS18655 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY08_RS18660 PF04898 Glutamate synthase central domain GPY08_RS18660 PF00310 Glutamine amidotransferases class-II GPY08_RS18660 PF01645 Conserved region in glutamate synthase GPY08_RS18660 PF01493 GXGXG motif GPY08_RS18665 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY08_RS18665 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GPY08_RS18685 PF01497 Periplasmic binding protein GPY08_RS18690 PF03458 UPF0126 domain GPY08_RS18710 PF03466 LysR substrate binding domain GPY08_RS18710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS18715 PF01925 Sulfite exporter TauE/SafE GPY08_RS18720 PF02142 MGS-like domain GPY08_RS18720 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GPY08_RS18720 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain GPY08_RS18725 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain GPY08_RS18725 PF00117 Glutamine amidotransferase class-I GPY08_RS18735 PF00293 NUDIX domain GPY08_RS18740 PF07517 SecA DEAD-like domain GPY08_RS18740 PF01043 SecA preprotein cross-linking domain GPY08_RS18740 PF02810 SEC-C motif GPY08_RS18740 PF07516 SecA Wing and Scaffold domain GPY08_RS18750 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase GPY08_RS18755 PF00091 Tubulin/FtsZ family, GTPase domain GPY08_RS18755 PF12327 FtsZ family, C-terminal domain GPY08_RS18760 PF02491 SHS2 domain inserted in FTSA GPY08_RS18765 PF03799 Cell division protein FtsQ GPY08_RS18765 PF08478 POTRA domain, FtsQ-type GPY08_RS18775 PF03033 Glycosyltransferase family 28 N-terminal domain GPY08_RS18775 PF04101 Glycosyltransferase family 28 C-terminal domain GPY08_RS18790 PF00953 Glycosyl transferase family 4 GPY08_RS18790 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 GPY08_RS18795 PF02875 Mur ligase family, glutamate ligase domain GPY08_RS18795 PF08245 Mur ligase middle domain GPY08_RS18795 PF01225 Mur ligase family, catalytic domain GPY08_RS18800 PF01225 Mur ligase family, catalytic domain GPY08_RS18800 PF02875 Mur ligase family, glutamate ligase domain GPY08_RS18800 PF08245 Mur ligase middle domain GPY08_RS18810 PF04999 Cell division protein FtsL GPY08_RS18815 PF01795 MraW methylase family GPY08_RS18825 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GPY08_RS18830 PF04348 LppC putative lipoprotein GPY08_RS18835 PF02021 Uncharacterised protein family UPF0102 GPY08_RS18840 PF13580 SIS domain GPY08_RS18845 PF04972 BON domain GPY08_RS18850 PF04386 Stringent starvation protein B GPY08_RS18855 PF00043 Glutathione S-transferase, C-terminal domain GPY08_RS18855 PF02798 Glutathione S-transferase, N-terminal domain GPY08_RS18860 PF02167 Cytochrome C1 family GPY08_RS18865 PF00032 Cytochrome b(C-terminal)/b6/petD GPY08_RS18865 PF00033 Cytochrome b/b6/petB GPY08_RS18870 PF00355 Rieske [2Fe-2S] domain GPY08_RS18870 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal GPY08_RS18875 PF00380 Ribosomal protein S9/S16 GPY08_RS18880 PF00572 Ribosomal protein L13 GPY08_RS18895 PF06295 Protein of unknown function (DUF1043) GPY08_RS18900 PF13180 PDZ domain GPY08_RS18900 PF00595 PDZ domain GPY08_RS18905 PF13180 PDZ domain GPY08_RS18910 PF01245 Ribosomal protein L19 GPY08_RS18920 PF05239 PRC-barrel domain GPY08_RS18920 PF01782 RimM N-terminal domain GPY08_RS18925 PF00886 Ribosomal protein S16 GPY08_RS18930 PF00448 SRP54-type protein, GTPase domain GPY08_RS18930 PF02978 Signal peptide binding domain GPY08_RS18930 PF02881 SRP54-type protein, helical bundle domain GPY08_RS18935 PF01578 Cytochrome C assembly protein GPY08_RS18940 PF00571 CBS domain GPY08_RS18940 PF01595 Cyclin M transmembrane N-terminal domain GPY08_RS18940 PF03471 Transporter associated domain GPY08_RS18945 PF02664 S-Ribosylhomocysteinase (LuxS) GPY08_RS18955 PF04262 Glutamate-cysteine ligase GPY08_RS18960 PF00675 Insulinase (Peptidase family M16) GPY08_RS18960 PF05193 Peptidase M16 inactive domain GPY08_RS18970 PF08240 Alcohol dehydrogenase GroES-like domain GPY08_RS18970 PF00107 Zinc-binding dehydrogenase GPY08_RS18975 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit GPY08_RS18980 PF02436 Conserved carboxylase domain GPY08_RS18980 PF00682 HMGL-like GPY08_RS18980 PF00364 Biotin-requiring enzyme GPY08_RS18985 PF04277 Oxaloacetate decarboxylase, gamma chain GPY08_RS19030 PF02599 Global regulator protein family GPY08_RS19035 PF01842 ACT domain GPY08_RS19035 PF00696 Amino acid kinase family GPY08_RS19035 PF13840 ACT domain GPY08_RS19040 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GPY08_RS19040 PF02272 DHHA1 domain GPY08_RS19040 PF01411 tRNA synthetases class II (A) GPY08_RS19045 PF02631 RecX family GPY08_RS19050 PF00154 recA bacterial DNA recombination protein GPY08_RS19055 PF02464 Competence-damaged protein GPY08_RS19060 PF01624 MutS domain I GPY08_RS19060 PF05188 MutS domain II GPY08_RS19060 PF05192 MutS domain III GPY08_RS19060 PF00488 MutS domain V GPY08_RS19060 PF05190 MutS family domain IV GPY08_RS19065 PF00140 Sigma-70 factor, region 1.2 GPY08_RS19065 PF04539 Sigma-70 region 3 GPY08_RS19065 PF04545 Sigma-70, region 4 GPY08_RS19065 PF04542 Sigma-70 region 2 GPY08_RS19080 PF01975 Survival protein SurE GPY08_RS19090 PF02542 YgbB family GPY08_RS19095 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GPY08_RS19100 PF04977 Septum formation initiator GPY08_RS19105 PF02673 Bacitracin resistance protein BacA GPY08_RS19110 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) GPY08_RS19115 PF02152 Dihydroneopterin aldolase GPY08_RS19120 PF02660 Glycerol-3-phosphate acyltransferase GPY08_RS19125 PF00561 alpha/beta hydrolase fold GPY08_RS19130 PF00814 Glycoprotease family GPY08_RS19135 PF01165 Ribosomal protein S21 GPY08_RS19140 PF09424 Yqey-like protein GPY08_RS19145 PF08278 DNA primase DnaG DnaB-binding GPY08_RS19145 PF10410 DnaB-helicase binding domain of primase GPY08_RS19145 PF08275 DNA primase catalytic core, N-terminal domain GPY08_RS19145 PF01807 CHC2 zinc finger GPY08_RS19150 PF04539 Sigma-70 region 3 GPY08_RS19150 PF04542 Sigma-70 region 2 GPY08_RS19150 PF00140 Sigma-70 factor, region 1.2 GPY08_RS19150 PF03979 Sigma-70 factor, region 1.1 GPY08_RS19150 PF04546 Sigma-70, non-essential region GPY08_RS19150 PF04545 Sigma-70, region 4 GPY08_RS19175 PF01451 Low molecular weight phosphotyrosine protein phosphatase GPY08_RS19180 PF18412 Outer-membrane lipoprotein Wza C-terminal domain GPY08_RS19180 PF10531 SLBB domain GPY08_RS19180 PF02563 Polysaccharide biosynthesis/export protein GPY08_RS19190 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF GPY08_RS19210 PF03480 Bacterial extracellular solute-binding protein, family 7 GPY08_RS19215 PF01380 SIS domain GPY08_RS19220 PF08220 DeoR-like helix-turn-helix domain GPY08_RS19220 PF00455 DeoR C terminal sensor domain GPY08_RS19225 PF02887 Pyruvate kinase, alpha/beta domain GPY08_RS19225 PF00224 Pyruvate kinase, barrel domain GPY08_RS19230 PF17158 Membrane-associated sensor, integral membrane domain GPY08_RS19230 PF00990 Diguanylate cyclase, GGDEF domain GPY08_RS19240 PF03466 LysR substrate binding domain GPY08_RS19240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS19245 PF01810 LysE type translocator GPY08_RS19255 PF05552 Conserved TM helix GPY08_RS19255 PF00924 Mechanosensitive ion channel GPY08_RS19260 PF01116 Fructose-bisphosphate aldolase class-II GPY08_RS19265 PF00162 Phosphoglycerate kinase GPY08_RS19270 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GPY08_RS19270 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GPY08_RS19275 PF07715 TonB-dependent Receptor Plug Domain GPY08_RS19275 PF00593 TonB dependent receptor GPY08_RS19280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS19280 PF03466 LysR substrate binding domain GPY08_RS19285 PF02779 Transketolase, pyrimidine binding domain GPY08_RS19285 PF02780 Transketolase, C-terminal domain GPY08_RS19285 PF00456 Transketolase, thiamine diphosphate binding domain GPY08_RS19290 PF02773 S-adenosylmethionine synthetase, C-terminal domain GPY08_RS19290 PF00438 S-adenosylmethionine synthetase, N-terminal domain GPY08_RS19290 PF02772 S-adenosylmethionine synthetase, central domain GPY08_RS19300 PF10263 SprT-like family GPY08_RS19300 PF17283 SprT-like zinc ribbon domain GPY08_RS19305 PF04231 Endonuclease I GPY08_RS19310 PF04452 RNA methyltransferase GPY08_RS19315 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain GPY08_RS19315 PF02951 Prokaryotic glutathione synthetase, N-terminal domain GPY08_RS19320 PF02622 Uncharacterized ACR, COG1678 GPY08_RS19325 PF03652 Holliday junction resolvase GPY08_RS19330 PF00437 Type II/IV secretion system protein GPY08_RS19335 PF00437 Type II/IV secretion system protein GPY08_RS19340 PF01168 Alanine racemase, N-terminal domain GPY08_RS19345 PF03807 NADP oxidoreductase coenzyme F420-dependent GPY08_RS19345 PF14748 Pyrroline-5-carboxylate reductase dimerisation GPY08_RS19350 PF02325 YGGT family GPY08_RS19355 PF02594 Uncharacterised ACR, YggU family COG1872 GPY08_RS19365 PF01725 Ham1 family GPY08_RS19370 PF04055 Radical SAM superfamily GPY08_RS19370 PF06969 HemN C-terminal domain GPY08_RS19375 PF00730 HhH-GPD superfamily base excision DNA repair protein GPY08_RS19380 PF04960 Glutaminase GPY08_RS19385 PF02390 Putative methyltransferase GPY08_RS19390 PF14815 NUDIX domain GPY08_RS19390 PF00633 Helix-hairpin-helix motif GPY08_RS19390 PF00730 HhH-GPD superfamily base excision DNA repair protein GPY08_RS19390 PF10576 Iron-sulfur binding domain of endonuclease III GPY08_RS19395 PF04362 Bacterial Fe(2+) trafficking GPY08_RS19400 PF01464 Transglycosylase SLT domain GPY08_RS19400 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain GPY08_RS19425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY08_RS19425 PF17200 Single Cache domain 2 GPY08_RS19425 PF00672 HAMP domain GPY08_RS19455 PF05099 Tellurite resistance protein TerB GPY08_RS19455 PF00226 DnaJ domain GPY08_RS19460 PF04453 LPS transport system D GPY08_RS19460 PF03968 OstA-like protein GPY08_RS19465 PF09312 SurA N-terminal domain GPY08_RS19470 PF04166 Pyridoxal phosphate biosynthetic protein PdxA GPY08_RS19475 PF00398 Ribosomal RNA adenine dimethylase GPY08_RS19480 PF04379 ApaG domain GPY08_RS19490 PF00186 Dihydrofolate reductase GPY08_RS19495 PF12821 Threonine/Serine exporter, ThrE GPY08_RS19500 PF06738 Putative threonine/serine exporter GPY08_RS19505 PF01926 50S ribosome-binding GTPase GPY08_RS19505 PF01018 GTP1/OBG GPY08_RS19510 PF01016 Ribosomal L27 protein GPY08_RS19515 PF00829 Ribosomal prokaryotic L21 protein GPY08_RS19525 PF13520 Amino acid permease GPY08_RS19530 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain GPY08_RS19530 PF00056 lactate/malate dehydrogenase, NAD binding domain GPY08_RS19550 PF00582 Universal stress protein family GPY08_RS19565 PF06877 Regulator of ribonuclease activity B GPY08_RS19570 PF01523 Putative modulator of DNA gyrase GPY08_RS19575 PF00795 Carbon-nitrogen hydrolase GPY08_RS19580 PF13502 AsmA-like C-terminal region GPY08_RS19580 PF13116 Protein of unknown function GPY08_RS19585 PF10150 Ribonuclease E/G family GPY08_RS19585 PF00575 S1 RNA binding domain GPY08_RS19590 PF02545 Maf-like protein GPY08_RS19595 PF04093 rod shape-determining protein MreD GPY08_RS19600 PF04085 rod shape-determining protein MreC GPY08_RS19645 PF00114 Pilin (bacterial filament) GPY08_RS19645 PF07963 Prokaryotic N-terminal methylation motif GPY08_RS19655 PF00482 Type II secretion system (T2SS), protein F GPY08_RS19695 PF00990 Diguanylate cyclase, GGDEF domain GPY08_RS19695 PF17157 Gammaproteobacterial periplasmic sensor domain GPY08_RS19695 PF00563 EAL domain GPY08_RS19700 PF00436 Single-strand binding protein family GPY08_RS19705 PF00196 Bacterial regulatory proteins, luxR family GPY08_RS19710 PF00483 Nucleotidyl transferase GPY08_RS19715 PF17755 UvrA DNA-binding domain GPY08_RS19715 PF00005 ABC transporter GPY08_RS19715 PF17760 UvrA interaction domain GPY08_RS19730 PF00696 Amino acid kinase family GPY08_RS19730 PF01842 ACT domain GPY08_RS19735 PF02607 B12 binding domain GPY08_RS19735 PF02310 B12 binding domain GPY08_RS19735 PF02574 Homocysteine S-methyltransferase GPY08_RS19735 PF00809 Pterin binding enzyme GPY08_RS19735 PF02965 Vitamin B12 dependent methionine synthase, activation domain GPY08_RS19740 PF00999 Sodium/hydrogen exchanger family GPY08_RS19800 PF01507 Phosphoadenosine phosphosulfate reductase family GPY08_RS19830 PF01207 Dihydrouridine synthase (Dus) GPY08_RS19835 PF01475 Ferric uptake regulator family GPY08_RS19845 PF00342 Phosphoglucose isomerase GPY08_RS19850 PF01894 Uncharacterised protein family UPF0047 GPY08_RS19855 PF01168 Alanine racemase, N-terminal domain GPY08_RS19855 PF00842 Alanine racemase, C-terminal domain GPY08_RS19870 PF01281 Ribosomal protein L9, N-terminal domain GPY08_RS19870 PF03948 Ribosomal protein L9, C-terminal domain GPY08_RS19875 PF01084 Ribosomal protein S18 GPY08_RS19880 PF00436 Single-strand binding protein family GPY08_RS19885 PF01250 Ribosomal protein S6 GPY08_RS19890 PF00210 Ferritin-like domain GPY08_RS19895 PF04324 BFD-like [2Fe-2S] binding domain GPY08_RS19900 PF03143 Elongation factor Tu C-terminal domain GPY08_RS19900 PF03144 Elongation factor Tu domain 2 GPY08_RS19900 PF00009 Elongation factor Tu GTP binding domain GPY08_RS19905 PF00009 Elongation factor Tu GTP binding domain GPY08_RS19905 PF03144 Elongation factor Tu domain 2 GPY08_RS19905 PF03764 Elongation factor G, domain IV GPY08_RS19905 PF00679 Elongation factor G C-terminus GPY08_RS19905 PF14492 Elongation Factor G, domain II GPY08_RS19910 PF00177 Ribosomal protein S7p/S5e GPY08_RS19915 PF00164 Ribosomal protein S12/S23 GPY08_RS19920 PF04077 DsrH like protein GPY08_RS19925 PF02635 DsrE/DsrF-like family GPY08_RS19930 PF02635 DsrE/DsrF-like family GPY08_RS19935 PF13309 HTH domain GPY08_RS19935 PF08348 YheO-like PAS domain GPY08_RS19940 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GPY08_RS19940 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GPY08_RS19950 PF04102 SlyX GPY08_RS19955 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) GPY08_RS19960 PF01145 SPFH domain / Band 7 family GPY08_RS19965 PF01145 SPFH domain / Band 7 family GPY08_RS19965 PF12221 Bacterial membrane protein N terminal GPY08_RS19970 PF13167 GTP-binding GTPase N-terminal GPY08_RS19970 PF16360 GTP-binding GTPase Middle Region GPY08_RS19970 PF01926 50S ribosome-binding GTPase GPY08_RS19975 PF17209 Hfq protein GPY08_RS19985 PF08676 MutL C terminal dimerisation domain GPY08_RS19985 PF01119 DNA mismatch repair protein, C-terminal domain GPY08_RS19995 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE GPY08_RS20000 PF08331 Domain of unknown function (DUF1730) GPY08_RS20050 PF00929 Exonuclease GPY08_RS20055 PF03193 RsgA GTPase GPY08_RS20060 PF02666 Phosphatidylserine decarboxylase GPY08_RS20070 PF12729 Four helix bundle sensory module for signal transduction GPY08_RS20070 PF00672 HAMP domain GPY08_RS20070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY08_RS20080 PF01676 Metalloenzyme superfamily GPY08_RS20080 PF06415 BPG-independent PGAM N-terminus (iPGM_N) GPY08_RS20085 PF01551 Peptidase family M23 GPY08_RS20095 PF08360 QacR-like protein, C-terminal region GPY08_RS20095 PF00440 Bacterial regulatory proteins, tetR family GPY08_RS20100 PF01208 Uroporphyrinogen decarboxylase (URO-D) GPY08_RS20105 PF00293 NUDIX domain GPY08_RS20105 PF09297 NADH pyrophosphatase zinc ribbon domain GPY08_RS20110 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GPY08_RS20115 PF04998 RNA polymerase Rpb1, domain 5 GPY08_RS20115 PF00623 RNA polymerase Rpb1, domain 2 GPY08_RS20115 PF04983 RNA polymerase Rpb1, domain 3 GPY08_RS20115 PF04997 RNA polymerase Rpb1, domain 1 GPY08_RS20115 PF05000 RNA polymerase Rpb1, domain 4 GPY08_RS20120 PF04560 RNA polymerase Rpb2, domain 7 GPY08_RS20120 PF00562 RNA polymerase Rpb2, domain 6 GPY08_RS20120 PF10385 RNA polymerase beta subunit external 1 domain GPY08_RS20120 PF04565 RNA polymerase Rpb2, domain 3 GPY08_RS20120 PF04561 RNA polymerase Rpb2, domain 2 GPY08_RS20120 PF04563 RNA polymerase beta subunit GPY08_RS20125 PF16320 Ribosomal protein L7/L12 dimerisation domain GPY08_RS20125 PF00542 Ribosomal protein L7/L12 C-terminal domain GPY08_RS20130 PF00466 Ribosomal protein L10 GPY08_RS20135 PF00687 Ribosomal protein L1p/L10e family GPY08_RS20140 PF03946 Ribosomal protein L11, N-terminal domain GPY08_RS20140 PF00298 Ribosomal protein L11, RNA binding domain GPY08_RS20145 PF00467 KOW motif GPY08_RS20145 PF02357 Transcription termination factor nusG GPY08_RS20150 PF00584 SecE/Sec61-gamma subunits of protein translocation complex GPY08_RS20155 PF03143 Elongation factor Tu C-terminal domain GPY08_RS20155 PF03144 Elongation factor Tu domain 2 GPY08_RS20155 PF00009 Elongation factor Tu GTP binding domain GPY08_RS20180 PF00485 Phosphoribulokinase / Uridine kinase family GPY08_RS20185 PF08279 HTH domain GPY08_RS20185 PF02237 Biotin protein ligase C terminal domain GPY08_RS20185 PF03099 Biotin/lipoate A/B protein ligase family GPY08_RS20190 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain GPY08_RS20190 PF01565 FAD binding domain GPY08_RS20200 PF13091 PLD-like domain GPY08_RS20235 PF00175 Oxidoreductase NAD-binding domain GPY08_RS20240 PF00175 Oxidoreductase NAD-binding domain GPY08_RS20240 PF00111 2Fe-2S iron-sulfur cluster binding domain GPY08_RS20240 PF00970 Oxidoreductase FAD-binding domain GPY08_RS20245 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase GPY08_RS20255 PF07497 Rho termination factor, RNA-binding domain GPY08_RS20255 PF07498 Rho termination factor, N-terminal domain GPY08_RS20255 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GPY08_RS20260 PF00085 Thioredoxin GPY08_RS20265 PF00270 DEAD/DEAH box helicase GPY08_RS20265 PF00271 Helicase conserved C-terminal domain GPY08_RS20270 PF02541 Ppx/GppA phosphatase family GPY08_RS20275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY08_RS20275 PF00512 His Kinase A (phospho-acceptor) domain GPY08_RS20275 PF00072 Response regulator receiver domain GPY08_RS20275 PF00497 Bacterial extracellular solute-binding proteins, family 3 GPY08_RS20280 PF12832 MFS_1 like family GPY08_RS20295 PF13193 AMP-binding enzyme C-terminal domain GPY08_RS20295 PF16177 Acetyl-coenzyme A synthetase N-terminus GPY08_RS20295 PF00501 AMP-binding enzyme GPY08_RS20300 PF01220 Dehydroquinase class II GPY08_RS20305 PF00364 Biotin-requiring enzyme GPY08_RS20310 PF02785 Biotin carboxylase C-terminal domain GPY08_RS20310 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GPY08_RS20310 PF00289 Biotin carboxylase, N-terminal domain GPY08_RS20320 PF01207 Dihydrouridine synthase (Dus) GPY08_RS20325 PF02954 Bacterial regulatory protein, Fis family GPY08_RS20330 PF00672 HAMP domain GPY08_RS20330 PF17200 Single Cache domain 2 GPY08_RS20330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY08_RS20335 PF13411 MerR HTH family regulatory protein GPY08_RS20345 PF01808 AICARFT/IMPCHase bienzyme GPY08_RS20345 PF02142 MGS-like domain GPY08_RS20350 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GPY08_RS20350 PF02843 Phosphoribosylglycinamide synthetase, C domain GPY08_RS20350 PF02844 Phosphoribosylglycinamide synthetase, N domain GPY08_RS20360 PF00216 Bacterial DNA-binding protein GPY08_RS20365 PF00571 CBS domain GPY08_RS20365 PF01595 Cyclin M transmembrane N-terminal domain GPY08_RS20370 PF00924 Mechanosensitive ion channel GPY08_RS20375 PF04222 Protein of unknown function (DUF416) GPY08_RS20380 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GPY08_RS20385 PF03167 Uracil DNA glycosylase superfamily GPY08_RS20390 PF10996 Beta-Casp domain GPY08_RS20390 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain GPY08_RS20390 PF00753 Metallo-beta-lactamase superfamily GPY08_RS20395 PF02706 Chain length determinant protein GPY08_RS20400 PF02719 Polysaccharide biosynthesis protein GPY08_RS20405 PF02397 Bacterial sugar transferase GPY08_RS20415 PF00535 Glycosyl transferase family 2 GPY08_RS20435 PF13537 Glutamine amidotransferase domain GPY08_RS20435 PF00733 Asparagine synthase GPY08_RS20455 PF00534 Glycosyl transferases group 1 GPY08_RS20455 PF13477 Glycosyl transferase 4-like GPY08_RS20460 PF02350 UDP-N-acetylglucosamine 2-epimerase GPY08_RS20470 PF02348 Cytidylyltransferase GPY08_RS20470 PF13472 GDSL-like Lipase/Acylhydrolase family GPY08_RS20475 PF01370 NAD dependent epimerase/dehydratase family GPY08_RS20480 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GPY08_RS20480 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GPY08_RS20480 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GPY08_RS20485 PF03279 Bacterial lipid A biosynthesis acyltransferase GPY08_RS20500 PF01075 Glycosyltransferase family 9 (heptosyltransferase) GPY08_RS20505 PF01075 Glycosyltransferase family 9 (heptosyltransferase) GPY08_RS20510 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) GPY08_RS20515 PF00534 Glycosyl transferases group 1 GPY08_RS20525 PF01075 Glycosyltransferase family 9 (heptosyltransferase) GPY08_RS20530 PF00535 Glycosyl transferase family 2 GPY08_RS20535 PF13439 Glycosyltransferase Family 4 GPY08_RS20535 PF00534 Glycosyl transferases group 1 GPY08_RS20540 PF13439 Glycosyltransferase Family 4 GPY08_RS20540 PF00534 Glycosyl transferases group 1 GPY08_RS20545 PF01467 Cytidylyltransferase-like GPY08_RS20555 PF01370 NAD dependent epimerase/dehydratase family GPY08_RS20560 PF06827 Zinc finger found in FPG and IleRS GPY08_RS20560 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain GPY08_RS20560 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain GPY08_RS20570 PF00471 Ribosomal protein L33 GPY08_RS20580 PF04002 RadC-like JAB domain GPY08_RS20585 PF17200 Single Cache domain 2 GPY08_RS20585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY08_RS20585 PF00672 HAMP domain GPY08_RS20590 PF02441 Flavoprotein GPY08_RS20590 PF04127 DNA / pantothenate metabolism flavoprotein GPY08_RS20595 PF00440 Bacterial regulatory proteins, tetR family GPY08_RS20600 PF03279 Bacterial lipid A biosynthesis acyltransferase GPY08_RS20605 PF00156 Phosphoribosyl transferase domain GPY08_RS20610 PF03725 3' exoribonuclease family, domain 2 GPY08_RS20610 PF01138 3' exoribonuclease family, domain 1 GPY08_RS20665 PF03350 Uncharacterized protein family, UPF0114 GPY08_RS20670 PF00593 TonB dependent receptor GPY08_RS20670 PF07715 TonB-dependent Receptor Plug Domain GPY08_RS20675 PF01032 FecCD transport family GPY08_RS20680 PF01497 Periplasmic binding protein GPY08_RS20685 PF00005 ABC transporter GPY08_RS20690 PF00005 ABC transporter GPY08_RS20690 PF00664 ABC transporter transmembrane region GPY08_RS20705 PF00271 Helicase conserved C-terminal domain GPY08_RS20705 PF00270 DEAD/DEAH box helicase GPY08_RS20705 PF00570 HRDC domain GPY08_RS20705 PF16124 RecQ zinc-binding GPY08_RS20705 PF09382 RQC domain GPY08_RS20710 PF00892 EamA-like transporter family GPY08_RS20720 PF01810 LysE type translocator GPY08_RS20730 PF00580 UvrD/REP helicase N-terminal domain GPY08_RS20730 PF13361 UvrD-like helicase C-terminal domain GPY08_RS20740 PF05114 Protein of unknown function (DUF692) GPY08_RS20760 PF01432 Peptidase family M3 GPY08_RS20765 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ GPY08_RS20770 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GPY08_RS20770 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY08_RS20810 PF07804 HipA-like C-terminal domain GPY08_RS20810 PF13657 HipA N-terminal domain GPY08_RS20825 PF04245 37-kD nucleoid-associated bacterial protein GPY08_RS20850 PF01047 MarR family GPY08_RS20860 PF00529 HlyD membrane-fusion protein of T1SS GPY08_RS20860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GPY08_RS20865 PF00873 AcrB/AcrD/AcrF family GPY08_RS20875 PF12911 N-terminal TM domain of oligopeptide transport permease C GPY08_RS20875 PF00528 Binding-protein-dependent transport system inner membrane component GPY08_RS20885 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GPY08_RS20890 PF00005 ABC transporter GPY08_RS20890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GPY08_RS20920 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GPY08_RS20925 PF00580 UvrD/REP helicase N-terminal domain GPY08_RS20925 PF13361 UvrD-like helicase C-terminal domain GPY08_RS20930 PF16295 Tetracyclin repressor-like, C-terminal domain GPY08_RS20930 PF00440 Bacterial regulatory proteins, tetR family GPY08_RS20935 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GPY08_RS20940 PF00873 AcrB/AcrD/AcrF family GPY08_RS20950 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain GPY08_RS20950 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain GPY08_RS20955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS20955 PF03466 LysR substrate binding domain GPY08_RS21000 PF00132 Bacterial transferase hexapeptide (six repeats) GPY08_RS21005 PF07369 Protein of unknown function (DUF1488) GPY08_RS21015 PF01218 Coproporphyrinogen III oxidase GPY08_RS21020 PF01300 Telomere recombination GPY08_RS21025 PF00731 AIR carboxylase GPY08_RS21030 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain GPY08_RS21030 PF02222 ATP-grasp domain GPY08_RS21035 PF01396 Topoisomerase DNA binding C4 zinc finger GPY08_RS21040 PF04361 Protein of unknown function (DUF494) GPY08_RS21050 PF01476 LysM domain GPY08_RS21055 PF01327 Polypeptide deformylase GPY08_RS21060 PF02911 Formyl transferase, C-terminal domain GPY08_RS21060 PF00551 Formyl transferase GPY08_RS21065 PF01189 16S rRNA methyltransferase RsmB/F GPY08_RS21065 PF01029 NusB family GPY08_RS21070 PF02080 TrkA-C domain GPY08_RS21070 PF02254 TrkA-N domain GPY08_RS21075 PF02386 Cation transport protein GPY08_RS21085 PF03006 Haemolysin-III related GPY08_RS21090 PF07070 SpoOM protein GPY08_RS21100 PF06288 Protein of unknown function (DUF1040) GPY08_RS21105 PF12801 4Fe-4S binding domain GPY08_RS21105 PF13746 4Fe-4S dicluster domain GPY08_RS21105 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase GPY08_RS21110 PF01636 Phosphotransferase enzyme family GPY08_RS21115 PF01323 DSBA-like thioredoxin domain GPY08_RS21120 PF01553 Acyltransferase GPY08_RS21125 PF01078 Magnesium chelatase, subunit ChlI GPY08_RS21125 PF13335 Magnesium chelatase, subunit ChlI C-terminal GPY08_RS21130 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GPY08_RS21130 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GPY08_RS21130 PF00205 Thiamine pyrophosphate enzyme, central domain GPY08_RS21140 PF01063 Amino-transferase class IV GPY08_RS21145 PF00920 Dehydratase family GPY08_RS21150 PF00585 C-terminal regulatory domain of Threonine dehydratase GPY08_RS21150 PF00291 Pyridoxal-phosphate dependent enzyme GPY08_RS21155 PF00107 Zinc-binding dehydrogenase GPY08_RS21155 PF08240 Alcohol dehydrogenase GroES-like domain GPY08_RS21160 PF03466 LysR substrate binding domain GPY08_RS21160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS21170 PF01206 Sulfurtransferase TusA GPY08_RS21185 PF02091 Glycyl-tRNA synthetase alpha subunit GPY08_RS21190 PF05746 DALR anticodon binding domain GPY08_RS21190 PF02092 Glycyl-tRNA synthetase beta subunit GPY08_RS21195 PF00155 Aminotransferase class I and II GPY08_RS21200 PF00011 Hsp20/alpha crystallin family GPY08_RS21205 PF00204 DNA gyrase B GPY08_RS21205 PF00986 DNA gyrase B subunit, carboxyl terminus GPY08_RS21205 PF18053 DNA gyrase B subunit insert domain GPY08_RS21205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY08_RS21205 PF01751 Toprim domain GPY08_RS21210 PF02463 RecF/RecN/SMC N terminal domain GPY08_RS21215 PF02768 DNA polymerase III beta subunit, C-terminal domain GPY08_RS21215 PF02767 DNA polymerase III beta subunit, central domain GPY08_RS21215 PF00712 DNA polymerase III beta subunit, N-terminal domain GPY08_RS21220 PF11638 DnaA N-terminal domain GPY08_RS21220 PF00308 Bacterial dnaA protein GPY08_RS21220 PF08299 Bacterial dnaA protein helix-turn-helix GPY08_RS21225 PF00497 Bacterial extracellular solute-binding proteins, family 3 GPY08_RS21230 PF00528 Binding-protein-dependent transport system inner membrane component GPY08_RS21235 PF00005 ABC transporter GPY08_RS21240 PF00468 Ribosomal protein L34 GPY08_RS21245 PF00825 Ribonuclease P GPY08_RS21250 PF01809 Putative membrane protein insertion efficiency factor GPY08_RS21255 PF14849 YidC periplasmic domain GPY08_RS21255 PF02096 60Kd inner membrane protein GPY08_RS21260 PF10396 GTP-binding protein TrmE N-terminus GPY08_RS21260 PF01926 50S ribosome-binding GTPase GPY08_RS21260 PF12631 MnmE helical domain GPY08_RS21265 PF00258 Flavodoxin GPY08_RS21270 PF13932 GidA associated domain GPY08_RS21270 PF01134 Glucose inhibited division protein A GPY08_RS21275 PF02527 rRNA small subunit methyltransferase G GPY08_RS21280 PF13614 AAA domain GPY08_RS21285 PF02195 ParB-like nuclease domain GPY08_RS21285 PF17762 HTH domain found in ParB protein GPY08_RS21290 PF03899 ATP synthase I chain GPY08_RS21295 PF00119 ATP synthase A chain GPY08_RS21300 PF00137 ATP synthase subunit C GPY08_RS21305 PF00430 ATP synthase B/B' CF(0) GPY08_RS21310 PF00213 ATP synthase delta (OSCP) subunit GPY08_RS21315 PF02874 ATP synthase alpha/beta family, beta-barrel domain GPY08_RS21315 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GPY08_RS21315 PF00306 ATP synthase alpha/beta chain, C terminal domain GPY08_RS21320 PF00231 ATP synthase GPY08_RS21325 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GPY08_RS21325 PF02874 ATP synthase alpha/beta family, beta-barrel domain GPY08_RS21330 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain GPY08_RS21330 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain GPY08_RS21335 PF12804 MobA-like NTP transferase domain GPY08_RS21335 PF14602 Hexapeptide repeat of succinyl-transferase GPY08_RS21335 PF00132 Bacterial transferase hexapeptide (six repeats) GPY08_RS21345 PF00497 Bacterial extracellular solute-binding proteins, family 3 GPY08_RS21350 PF07690 Major Facilitator Superfamily GPY08_RS21355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS21355 PF03466 LysR substrate binding domain GPY08_RS21360 PF00108 Thiolase, N-terminal domain GPY08_RS21360 PF02803 Thiolase, C-terminal domain GPY08_RS21365 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GPY08_RS21365 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GPY08_RS21365 PF00378 Enoyl-CoA hydratase/isomerase GPY08_RS21370 PF01205 Uncharacterized protein family UPF0029 GPY08_RS21370 PF09186 Domain of unknown function (DUF1949) GPY08_RS21380 PF12724 Flavodoxin domain GPY08_RS21430 PF00394 Multicopper oxidase GPY08_RS21430 PF07731 Multicopper oxidase GPY08_RS21430 PF07732 Multicopper oxidase GPY08_RS21435 PF02537 CrcB-like protein, Camphor Resistance (CrcB) GPY08_RS21440 PF13667 ThiC-associated domain GPY08_RS21440 PF01964 Radical SAM ThiC family GPY08_RS21445 PF02581 Thiamine monophosphate synthase GPY08_RS21450 PF00899 ThiF family GPY08_RS21455 PF02597 ThiS family GPY08_RS21455 PF05690 Thiazole biosynthesis protein ThiG GPY08_RS21465 PF04055 Radical SAM superfamily GPY08_RS21465 PF06968 Biotin and Thiamin Synthesis associated domain GPY08_RS21475 PF00528 Binding-protein-dependent transport system inner membrane component GPY08_RS21480 PF04069 Substrate binding domain of ABC-type glycine betaine transport system GPY08_RS21485 PF00732 GMC oxidoreductase GPY08_RS21485 PF05199 GMC oxidoreductase GPY08_RS21500 PF00557 Metallopeptidase family M24 GPY08_RS21500 PF01321 Creatinase/Prolidase N-terminal domain GPY08_RS21500 PF00557 Metallopeptidase family M24 GPY08_RS21500 PF01321 Creatinase/Prolidase N-terminal domain GPY08_RS21505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY08_RS21505 PF03466 LysR substrate binding domain GPY08_RS21510 PF07690 Major Facilitator Superfamily GPY08_RS21520 PF01037 Lrp/AsnC ligand binding domain GPY08_RS21525 PF08448 PAS fold GPY08_RS21525 PF00990 Diguanylate cyclase, GGDEF domain GPY08_RS21525 PF00563 EAL domain GPY08_RS21530 PF04445 Putative SAM-dependent methyltransferase GPY08_RS21540 PF00892 EamA-like transporter family GPY08_RS21545 PF00582 Universal stress protein family GPY08_RS21550 PF00210 Ferritin-like domain GPY08_RS21555 PF10625 Universal stress protein B (UspB) GPY08_RS21565 PF02653 Branched-chain amino acid transport system / permease component GPY08_RS21570 PF00005 ABC transporter GPY08_RS21575 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GPY08_RS21580 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GPY08_RS21580 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GPY08_RS21585 PF00596 Class II Aldolase and Adducin N-terminal domain GPY08_RS21590 PF02610 L-arabinose isomerase GPY08_RS21590 PF11762 L-arabinose isomerase C-terminal domain GPY08_RS21600 PF12833 Helix-turn-helix domain GPY08_RS21600 PF02311 AraC-like ligand binding domain GPY08_RS21615 PF02646 RmuC family GPY08_RS21620 PF01209 ubiE/COQ5 methyltransferase family GPY08_RS21625 PF02036 SCP-2 sterol transfer family GPY08_RS21630 PF03109 ABC1 family GPY08_RS21640 PF02416 mttA/Hcf106 family GPY08_RS21645 PF00902 Sec-independent protein translocase protein (TatC) GPY08_RS21650 PF01026 TatD related DNase GPY08_RS21655 PF00490 Delta-aminolevulinic acid dehydratase GPY08_RS21660 PF00583 Acetyltransferase (GNAT) family GPY08_RS21665 PF01367 5'-3' exonuclease, C-terminal SAM fold GPY08_RS21665 PF00476 DNA polymerase family A GPY08_RS21665 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GPY08_RS21665 PF01612 3'-5' exonuclease GPY08_RS21670 PF01926 50S ribosome-binding GTPase GPY08_RS21675 PF00034 Cytochrome c GPY08_RS21685 PF04220 Der GTPase activator (YihI) GPY08_RS21690 PF10675 Protein of unknown function (DUF2489) GPY08_RS21695 PF06969 HemN C-terminal domain GPY08_RS21695 PF04055 Radical SAM superfamily GPY08_RS21700 PF07219 HemY protein N-terminus GPY08_RS21700 PF07719 Tetratricopeptide repeat GPY08_RS21705 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase GPY08_RS21710 PF02602 Uroporphyrinogen-III synthase HemD GPY08_RS21715 PF03900 Porphobilinogen deaminase, C-terminal domain GPY08_RS21715 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain GPY08_RS21720 PF12633 Adenylate cyclase NT domain GPY08_RS21720 PF01295 Adenylate cyclase, class-I GPY08_RS21725 PF01491 Frataxin-like domain GPY08_RS21735 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain GPY08_RS21735 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GPY08_RS21740 PF01678 Diaminopimelate epimerase GPY08_RS21745 PF04340 Protein of unknown function, DUF484 GPY08_RS21750 PF00589 Phage integrase family GPY08_RS21750 PF02899 Phage integrase, N-terminal SAM-like domain GPY08_RS21755 PF13419 Haloacid dehalogenase-like hydrolase GPY08_RS21760 PF08495 FIST N domain GPY08_RS21760 PF00990 Diguanylate cyclase, GGDEF domain GPY08_RS21760 PF00563 EAL domain GPY08_RS21760 PF10442 FIST C domain GPY08_RS21785 PF12146 Serine aminopeptidase, S33 GPY08_RS21790 PF01810 LysE type translocator GPY08_RS21800 PF01022 Bacterial regulatory protein, arsR family GPY08_RS21820 PF00210 Ferritin-like domain GPY08_RS21850 PF01914 MarC family integral membrane protein GPY08_RS21865 PF00448 SRP54-type protein, GTPase domain GPY08_RS21865 PF02881 SRP54-type protein, helical bundle domain GPY08_RS21870 PF00005 ABC transporter GPY08_RS21875 PF18075 FtsX extracellular domain GPY08_RS21880 PF00140 Sigma-70 factor, region 1.2 GPY08_RS21880 PF04542 Sigma-70 region 2 GPY08_RS21880 PF04545 Sigma-70, region 4 GPY08_RS21885 PF00581 Rhodanese-like domain GPY08_RS21890 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease GPY08_RS21890 PF01694 Rhomboid family GPY08_RS21895 PF03748 Flagellar basal body-associated protein FliL GPY08_RS21900 PF04345 Chorismate lyase GPY08_RS21905 PF01040 UbiA prenyltransferase family GPY08_RS21910 PF01553 Acyltransferase GPY08_RS21915 PF01219 Prokaryotic diacylglycerol kinase GPY08_RS21920 PF01726 LexA DNA binding domain GPY08_RS21920 PF00717 Peptidase S24-like GPY08_RS21930 PF01554 MatE GPY08_RS21935 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GPY08_RS21935 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY08_RS21940 PF00440 Bacterial regulatory proteins, tetR family GPY08_RS21950 PF05958 tRNA (Uracil-5-)-methyltransferase GPY08_RS21955 PF00593 TonB dependent receptor GPY08_RS21955 PF07715 TonB-dependent Receptor Plug Domain GPY08_RS21960 PF00764 Arginosuccinate synthase GPY08_RS21965 PF01177 Asp/Glu/Hydantoin racemase