locus-tag class description AL475_RS00005 PF00158 Sigma-54 interaction domain AL475_RS00005 PF01590 GAF domain AL475_RS00015 PF01546 Peptidase family M20/M25/M40 AL475_RS00015 PF07687 Peptidase dimerisation domain AL475_RS00020 PF01773 Na+ dependent nucleoside transporter N-terminus AL475_RS00020 PF07670 Nucleoside recognition AL475_RS00020 PF07662 Na+ dependent nucleoside transporter C-terminus AL475_RS00030 PF00128 Alpha amylase, catalytic domain AL475_RS00045 PF00672 HAMP domain AL475_RS00045 PF02743 Cache domain AL475_RS00045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL475_RS00050 PF07726 ATPase family associated with various cellular activities (AAA) AL475_RS00050 PF17863 AAA lid domain AL475_RS00055 PF01882 Protein of unknown function DUF58 AL475_RS00070 PF13519 von Willebrand factor type A domain AL475_RS00085 PF17158 Membrane-associated sensor, integral membrane domain AL475_RS00085 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS00095 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AL475_RS00095 PF00072 Response regulator receiver domain AL475_RS00095 PF01627 Hpt domain AL475_RS00095 PF00512 His Kinase A (phospho-acceptor) domain AL475_RS00095 PF00672 HAMP domain AL475_RS00095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL475_RS00100 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS00100 PF00072 Response regulator receiver domain AL475_RS00105 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AL475_RS00110 PF04996 Succinylarginine dihydrolase AL475_RS00115 PF00171 Aldehyde dehydrogenase family AL475_RS00120 PF04958 Arginine N-succinyltransferase beta subunit AL475_RS00125 PF04958 Arginine N-succinyltransferase beta subunit AL475_RS00130 PF00202 Aminotransferase class-III AL475_RS00135 PF12833 Helix-turn-helix domain AL475_RS00140 PF13378 Enolase C-terminal domain-like AL475_RS00140 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AL475_RS00150 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS00155 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS00160 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL475_RS00165 PF03466 LysR substrate binding domain AL475_RS00165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS00190 PF04320 Protein with unknown function (DUF469) AL475_RS00195 PF00582 Universal stress protein family AL475_RS00200 PF00472 RF-1 domain AL475_RS00205 PF12843 Putative quorum-sensing-regulated virulence factor AL475_RS00215 PF01266 FAD dependent oxidoreductase AL475_RS00230 PF02954 Bacterial regulatory protein, Fis family AL475_RS00230 PF00158 Sigma-54 interaction domain AL475_RS00230 PF00072 Response regulator receiver domain AL475_RS00235 PF01238 Phosphomannose isomerase type I AL475_RS00240 PF02595 Glycerate kinase family AL475_RS00245 PF07748 Glycosyl hydrolases family 38 C-terminal domain AL475_RS00245 PF01074 Glycosyl hydrolases family 38 N-terminal domain AL475_RS00245 PF09261 Alpha mannosidase middle domain AL475_RS00250 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AL475_RS00250 PF02378 Phosphotransferase system, EIIC AL475_RS00250 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AL475_RS00255 PF00392 Bacterial regulatory proteins, gntR family AL475_RS00255 PF07702 UTRA domain AL475_RS00260 PF00512 His Kinase A (phospho-acceptor) domain AL475_RS00260 PF02743 Cache domain AL475_RS00260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL475_RS00275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL475_RS00275 PF00672 HAMP domain AL475_RS00275 PF12729 Four helix bundle sensory module for signal transduction AL475_RS00280 PF00563 EAL domain AL475_RS00280 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS00280 PF03707 Bacterial signalling protein N terminal repeat AL475_RS00280 PF13188 PAS domain AL475_RS00285 PF07690 Major Facilitator Superfamily AL475_RS00290 PF03009 Glycerophosphoryl diester phosphodiesterase family AL475_RS00295 PF01048 Phosphorylase superfamily AL475_RS00300 PF03466 LysR substrate binding domain AL475_RS00300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS00305 PF00356 Bacterial regulatory proteins, lacI family AL475_RS00310 PF00294 pfkB family carbohydrate kinase AL475_RS00315 PF13407 Periplasmic binding protein domain AL475_RS00320 PF02653 Branched-chain amino acid transport system / permease component AL475_RS00325 PF00005 ABC transporter AL475_RS00330 PF05025 RbsD / FucU transport protein family AL475_RS00350 PF01471 Putative peptidoglycan binding domain AL475_RS00350 PF04717 Type VI secretion system, phage-baseplate injector AL475_RS00360 PF06761 Intracellular multiplication and human macrophage-killing AL475_RS00360 PF06744 Type VI secretion protein IcmF C-terminal AL475_RS00360 PF14331 ImcF-related N-terminal domain AL475_RS00375 PF02954 Bacterial regulatory protein, Fis family AL475_RS00375 PF00158 Sigma-54 interaction domain AL475_RS00380 PF17871 AAA lid domain AL475_RS00380 PF07724 AAA domain (Cdc48 subfamily) AL475_RS00380 PF00004 ATPase family associated with various cellular activities (AAA) AL475_RS00380 PF10431 C-terminal, D2-small domain, of ClpB protein AL475_RS00390 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE AL475_RS00410 PF05947 Type VI secretion system, TssF AL475_RS00420 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath AL475_RS00440 PF01037 Lrp/AsnC ligand binding domain AL475_RS00445 PF01810 LysE type translocator AL475_RS00450 PF01047 MarR family AL475_RS00455 PF01545 Cation efflux family AL475_RS00460 PF00892 EamA-like transporter family AL475_RS00465 PF00849 RNA pseudouridylate synthase AL475_RS00470 PF00440 Bacterial regulatory proteins, tetR family AL475_RS00470 PF16925 Tetracyclin repressor-like, C-terminal domain AL475_RS00475 PF00107 Zinc-binding dehydrogenase AL475_RS00475 PF16884 N-terminal domain of oxidoreductase AL475_RS00485 PF01740 STAS domain AL475_RS00485 PF00916 Sulfate permease family AL475_RS00490 PF13419 Haloacid dehalogenase-like hydrolase AL475_RS00495 PF07702 UTRA domain AL475_RS00495 PF00392 Bacterial regulatory proteins, gntR family AL475_RS00500 PF01547 Bacterial extracellular solute-binding protein AL475_RS00520 PF08402 TOBE domain AL475_RS00520 PF00005 ABC transporter AL475_RS00530 PF00563 EAL domain AL475_RS00530 PF12792 CSS motif domain associated with EAL AL475_RS00535 PF00248 Aldo/keto reductase family AL475_RS00540 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AL475_RS00545 PF03466 LysR substrate binding domain AL475_RS00545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS00550 PF07690 Major Facilitator Superfamily AL475_RS00570 PF00581 Rhodanese-like domain AL475_RS00585 PF00579 tRNA synthetases class I (W and Y) AL475_RS00585 PF01479 S4 domain AL475_RS00590 PF13649 Methyltransferase domain AL475_RS00595 PF03928 Haem-degrading AL475_RS00600 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AL475_RS00600 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AL475_RS00605 PF08220 DeoR-like helix-turn-helix domain AL475_RS00605 PF00455 DeoR C terminal sensor domain AL475_RS00610 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AL475_RS00610 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AL475_RS00625 PF12563 Hemolytic toxin N terminal AL475_RS00625 PF16458 Beta-prism lectin AL475_RS00625 PF07968 Leukocidin/Hemolysin toxin family AL475_RS00630 PF00657 GDSL-like Lipase/Acylhydrolase AL475_RS00640 PF03466 LysR substrate binding domain AL475_RS00640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS00650 PF00005 ABC transporter AL475_RS00655 PF01032 FecCD transport family AL475_RS00660 PF01032 FecCD transport family AL475_RS00665 PF01497 Periplasmic binding protein AL475_RS00670 PF00593 TonB dependent receptor AL475_RS00670 PF07715 TonB-dependent Receptor Plug Domain AL475_RS00695 PF00672 HAMP domain AL475_RS00695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL475_RS00700 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AL475_RS00705 PF03466 LysR substrate binding domain AL475_RS00705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS00715 PF02001 Protein of unknown function DUF134 AL475_RS00720 PF00881 Nitroreductase family AL475_RS00725 PF03466 LysR substrate binding domain AL475_RS00725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS00730 PF00155 Aminotransferase class I and II AL475_RS00735 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL475_RS00740 PF00892 EamA-like transporter family AL475_RS00745 PF00462 Glutaredoxin AL475_RS00755 PF07690 Major Facilitator Superfamily AL475_RS00760 PF03466 LysR substrate binding domain AL475_RS00760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS00765 PF00563 EAL domain AL475_RS00765 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS00765 PF13188 PAS domain AL475_RS00765 PF03707 Bacterial signalling protein N terminal repeat AL475_RS00770 PF08525 Opacity-associated protein A N-terminal motif AL475_RS00770 PF01551 Peptidase family M23 AL475_RS00770 PF01476 LysM domain AL475_RS00785 PF00916 Sulfate permease family AL475_RS00785 PF01740 STAS domain AL475_RS00790 PF07670 Nucleoside recognition AL475_RS00800 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS00800 PF17152 Periplasmic sensor domain AL475_RS00805 PF00005 ABC transporter AL475_RS00810 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS00815 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS00820 PF12849 PBP superfamily domain AL475_RS00825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL475_RS00825 PF12729 Four helix bundle sensory module for signal transduction AL475_RS00825 PF00672 HAMP domain AL475_RS00830 PF00271 Helicase conserved C-terminal domain AL475_RS00830 PF00270 DEAD/DEAH box helicase AL475_RS00840 PF17969 L,D-transpeptidase C-terminal domain AL475_RS00840 PF01476 LysM domain AL475_RS00840 PF03734 L,D-transpeptidase catalytic domain AL475_RS00845 PF00875 DNA photolyase AL475_RS00845 PF03441 FAD binding domain of DNA photolyase AL475_RS00850 PF13411 MerR HTH family regulatory protein AL475_RS00855 PF08349 Protein of unknown function (DUF1722) AL475_RS00860 PF01048 Phosphorylase superfamily AL475_RS00875 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS00880 PF11742 Protein of unknown function (DUF3302) AL475_RS00885 PF00529 HlyD membrane-fusion protein of T1SS AL475_RS00885 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL475_RS00915 PF07238 PilZ domain AL475_RS00915 PF12945 Flagellar protein YcgR AL475_RS00920 PF03616 Sodium/glutamate symporter AL475_RS00935 PF02630 SCO1/SenC AL475_RS00945 PF03193 RsgA GTPase AL475_RS00950 PF00375 Sodium:dicarboxylate symporter family AL475_RS00960 PF07148 Maltose operon periplasmic protein precursor (MalM) AL475_RS00965 PF02264 LamB porin AL475_RS00970 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AL475_RS00970 PF00128 Alpha amylase, catalytic domain AL475_RS00980 PF00664 ABC transporter transmembrane region AL475_RS00980 PF00005 ABC transporter AL475_RS00985 PF00589 Phage integrase family AL475_RS00985 PF02899 Phage integrase, N-terminal SAM-like domain AL475_RS00990 PF07669 Eco57I restriction-modification methylase AL475_RS00995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL475_RS00995 PF00183 Hsp90 protein AL475_RS01030 PF06892 Phage regulatory protein CII (CP76) AL475_RS01050 PF05840 Bacteriophage replication gene A protein (GPA) AL475_RS01190 PF04984 Phage tail sheath protein subtilisin-like domain AL475_RS01190 PF17482 Phage tail sheath C-terminal domain AL475_RS01225 PF01569 PAP2 superfamily AL475_RS01235 PF01568 Molydopterin dinucleotide binding domain AL475_RS01235 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AL475_RS01235 PF00384 Molybdopterin oxidoreductase AL475_RS01235 PF12838 4Fe-4S dicluster domain AL475_RS01235 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AL475_RS01250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL475_RS01250 PF00672 HAMP domain AL475_RS01250 PF17200 Single Cache domain 2 AL475_RS01260 PF00005 ABC transporter AL475_RS01265 PF07702 UTRA domain AL475_RS01265 PF00392 Bacterial regulatory proteins, gntR family AL475_RS01270 PF08329 Chitinase A, N-terminal domain AL475_RS01270 PF00704 Glycosyl hydrolases family 18 AL475_RS01275 PF01212 Beta-eliminating lyase AL475_RS01280 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) AL475_RS01285 PF01966 HD domain AL475_RS01295 PF00939 Sodium:sulfate symporter transmembrane region AL475_RS01320 PF01124 MAPEG family AL475_RS01340 PF04717 Type VI secretion system, phage-baseplate injector AL475_RS01345 PF05638 Type VI secretion system effector, Hcp AL475_RS01350 PF02806 Alpha amylase, C-terminal all-beta domain AL475_RS01350 PF00128 Alpha amylase, catalytic domain AL475_RS01350 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AL475_RS01355 PF02446 4-alpha-glucanotransferase AL475_RS01360 PF00343 Carbohydrate phosphorylase AL475_RS01365 PF17874 MalT-like TPR region AL475_RS01365 PF00196 Bacterial regulatory proteins, luxR family AL475_RS01370 PF10928 Protein of unknown function (DUF2810) AL475_RS01375 PF01040 UbiA prenyltransferase family AL475_RS01380 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AL475_RS01385 PF00510 Cytochrome c oxidase subunit III AL475_RS01390 PF00115 Cytochrome C and Quinol oxidase polypeptide I AL475_RS01395 PF06481 COX Aromatic Rich Motif AL475_RS01395 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AL475_RS01405 PF17200 Single Cache domain 2 AL475_RS01405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL475_RS01405 PF00672 HAMP domain AL475_RS01410 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AL475_RS01410 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AL475_RS01415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS01415 PF03466 LysR substrate binding domain AL475_RS01425 PF01709 Transcriptional regulator AL475_RS01450 PF13614 AAA domain AL475_RS01450 PF18607 ParA helix turn helix domain AL475_RS01455 PF02195 ParB-like nuclease domain AL475_RS01455 PF08775 ParB family AL475_RS01460 PF13416 Bacterial extracellular solute-binding protein AL475_RS01465 PF05127 Helicase AL475_RS01465 PF13718 GNAT acetyltransferase 2 AL475_RS01475 PF00072 Response regulator receiver domain AL475_RS01480 PF01584 CheW-like domain AL475_RS01480 PF09078 CheY binding AL475_RS01480 PF02895 Signal transducing histidine kinase, homodimeric domain AL475_RS01480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL475_RS01480 PF01627 Hpt domain AL475_RS01485 PF01584 CheW-like domain AL475_RS01490 PF01584 CheW-like domain AL475_RS01495 PF00672 HAMP domain AL475_RS01495 PF02203 Tar ligand binding domain homologue AL475_RS01495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL475_RS01500 PF03705 CheR methyltransferase, all-alpha domain AL475_RS01500 PF01739 CheR methyltransferase, SAM binding domain AL475_RS01505 PF03975 CheD chemotactic sensory transduction AL475_RS01510 PF00072 Response regulator receiver domain AL475_RS01510 PF01339 CheB methylesterase AL475_RS01515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL475_RS01515 PF02743 Cache domain AL475_RS01515 PF00672 HAMP domain AL475_RS01525 PF00486 Transcriptional regulatory protein, C terminal AL475_RS01525 PF00072 Response regulator receiver domain AL475_RS01535 PF00005 ABC transporter AL475_RS01535 PF03412 Peptidase C39 family AL475_RS01535 PF00664 ABC transporter transmembrane region AL475_RS01550 PF00529 HlyD membrane-fusion protein of T1SS AL475_RS01555 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AL475_RS01555 PF01243 Pyridoxamine 5'-phosphate oxidase AL475_RS01560 PF00196 Bacterial regulatory proteins, luxR family AL475_RS01560 PF00072 Response regulator receiver domain AL475_RS01565 PF03781 Sulfatase-modifying factor enzyme 1 AL475_RS01575 PF12833 Helix-turn-helix domain AL475_RS01580 PF14850 DNA-binding domain of Proline dehydrogenase AL475_RS01580 PF01619 Proline dehydrogenase AL475_RS01580 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AL475_RS01580 PF00171 Aldehyde dehydrogenase family AL475_RS01590 PF00474 Sodium:solute symporter family AL475_RS01600 PF00672 HAMP domain AL475_RS01600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL475_RS01605 PF01037 Lrp/AsnC ligand binding domain AL475_RS01610 PF00171 Aldehyde dehydrogenase family AL475_RS01615 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AL475_RS01620 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AL475_RS01625 PF00270 DEAD/DEAH box helicase AL475_RS01625 PF00271 Helicase conserved C-terminal domain AL475_RS01635 PF03466 LysR substrate binding domain AL475_RS01635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS01640 PF08241 Methyltransferase domain AL475_RS01650 PF09278 MerR, DNA binding AL475_RS01650 PF00376 MerR family regulatory protein AL475_RS01655 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) AL475_RS01660 PF00266 Aminotransferase class-V AL475_RS01665 PF01037 Lrp/AsnC ligand binding domain AL475_RS01670 PF02447 GntP family permease AL475_RS01675 PF01261 Xylose isomerase-like TIM barrel AL475_RS01680 PF00596 Class II Aldolase and Adducin N-terminal domain AL475_RS01685 PF07005 Sugar-binding N-terminal domain AL475_RS01685 PF17042 Nucleotide-binding C-terminal domain AL475_RS01690 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AL475_RS01690 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AL475_RS01695 PF08220 DeoR-like helix-turn-helix domain AL475_RS01695 PF00455 DeoR C terminal sensor domain AL475_RS01700 PF13426 PAS domain AL475_RS01700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL475_RS01700 PF08447 PAS fold AL475_RS01705 PF01266 FAD dependent oxidoreductase AL475_RS01710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS01710 PF03466 LysR substrate binding domain AL475_RS01715 PF13460 NAD(P)H-binding AL475_RS01720 PF00893 Small Multidrug Resistance protein AL475_RS01725 PF02311 AraC-like ligand binding domain AL475_RS01725 PF12833 Helix-turn-helix domain AL475_RS01730 PF00857 Isochorismatase family AL475_RS01735 PF12833 Helix-turn-helix domain AL475_RS01750 PF03992 Antibiotic biosynthesis monooxygenase AL475_RS01755 PF03733 Inner membrane component domain AL475_RS01765 PF00155 Aminotransferase class I and II AL475_RS01765 PF00392 Bacterial regulatory proteins, gntR family AL475_RS01795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS01795 PF03466 LysR substrate binding domain AL475_RS01800 PF00106 short chain dehydrogenase AL475_RS01815 PF13599 Pentapeptide repeats (9 copies) AL475_RS01820 PF01844 HNH endonuclease AL475_RS01840 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL475_RS01850 PF00132 Bacterial transferase hexapeptide (six repeats) AL475_RS01855 PF00929 Exonuclease AL475_RS01855 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AL475_RS01855 PF14579 Helix-hairpin-helix motif AL475_RS01855 PF07733 Bacterial DNA polymerase III alpha NTPase domain AL475_RS01855 PF02811 PHP domain AL475_RS01875 PF00012 Hsp70 protein AL475_RS01880 PF03099 Biotin/lipoate A/B protein ligase family AL475_RS01880 PF10437 Bacterial lipoate protein ligase C-terminus AL475_RS01890 PF03466 LysR substrate binding domain AL475_RS01890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS01895 PF03806 AbgT putative transporter family AL475_RS01900 PF07687 Peptidase dimerisation domain AL475_RS01900 PF01546 Peptidase family M20/M25/M40 AL475_RS01910 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AL475_RS01915 PF05068 Mannitol repressor AL475_RS01920 PF08125 Mannitol dehydrogenase C-terminal domain AL475_RS01920 PF01232 Mannitol dehydrogenase Rossmann domain AL475_RS01925 PF02378 Phosphotransferase system, EIIC AL475_RS01925 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AL475_RS01925 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AL475_RS01935 PF01551 Peptidase family M23 AL475_RS01935 PF04225 Opacity-associated protein A LysM-like domain AL475_RS01945 PF02225 PA domain AL475_RS01945 PF04389 Peptidase family M28 AL475_RS01950 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AL475_RS01970 PF03466 LysR substrate binding domain AL475_RS01970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS01975 PF07969 Amidohydrolase family AL475_RS01980 PF07681 DoxX AL475_RS01985 PF00730 HhH-GPD superfamily base excision DNA repair protein AL475_RS01985 PF06029 AlkA N-terminal domain AL475_RS01990 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AL475_RS01990 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AL475_RS02000 PF03600 Citrate transporter AL475_RS02005 PF00375 Sodium:dicarboxylate symporter family AL475_RS02035 PF00561 alpha/beta hydrolase fold AL475_RS02045 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL475_RS02045 PF00529 HlyD membrane-fusion protein of T1SS AL475_RS02050 PF01047 MarR family AL475_RS02060 PF02566 OsmC-like protein AL475_RS02065 PF01047 MarR family AL475_RS02070 PF01557 Fumarylacetoacetate (FAA) hydrolase family AL475_RS02090 PF01810 LysE type translocator AL475_RS02100 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AL475_RS02105 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AL475_RS02105 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AL475_RS02105 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AL475_RS02105 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AL475_RS02110 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AL475_RS02110 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AL475_RS02115 PF00115 Cytochrome C and Quinol oxidase polypeptide I AL475_RS02120 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 AL475_RS02125 PF00510 Cytochrome c oxidase subunit III AL475_RS02145 PF02628 Cytochrome oxidase assembly protein AL475_RS02150 PF01040 UbiA prenyltransferase family AL475_RS02155 PF12706 Beta-lactamase superfamily domain AL475_RS02165 PF00793 DAHP synthetase I family AL475_RS02170 PF01554 MatE AL475_RS02175 PF08448 PAS fold AL475_RS02175 PF00563 EAL domain AL475_RS02175 PF05231 MASE1 AL475_RS02175 PF08447 PAS fold AL475_RS02175 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS02175 PF13426 PAS domain AL475_RS02195 PF12833 Helix-turn-helix domain AL475_RS02205 PF02567 Phenazine biosynthesis-like protein AL475_RS02215 PF00155 Aminotransferase class I and II AL475_RS02215 PF00392 Bacterial regulatory proteins, gntR family AL475_RS02220 PF00892 EamA-like transporter family AL475_RS02225 PF07690 Major Facilitator Superfamily AL475_RS02230 PF02798 Glutathione S-transferase, N-terminal domain AL475_RS02230 PF14497 Glutathione S-transferase, C-terminal domain AL475_RS02235 PF03737 Aldolase/RraA AL475_RS02245 PF01361 Tautomerase enzyme AL475_RS02260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS02260 PF03466 LysR substrate binding domain AL475_RS02285 PF05656 Protein of unknown function (DUF805) AL475_RS02300 PF00291 Pyridoxal-phosphate dependent enzyme AL475_RS02305 PF02627 Carboxymuconolactone decarboxylase family AL475_RS02315 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AL475_RS02315 PF02896 PEP-utilising enzyme, TIM barrel domain AL475_RS02315 PF00391 PEP-utilising enzyme, mobile domain AL475_RS02320 PF03618 Kinase/pyrophosphorylase AL475_RS02330 PF01070 FMN-dependent dehydrogenase AL475_RS02335 PF02652 L-lactate permease AL475_RS02345 PF03466 LysR substrate binding domain AL475_RS02345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS02350 PF00005 ABC transporter AL475_RS02350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL475_RS02360 PF13654 AAA domain AL475_RS02360 PF05362 Lon protease (S16) C-terminal proteolytic domain AL475_RS02365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL475_RS02365 PF00672 HAMP domain AL475_RS02365 PF17200 Single Cache domain 2 AL475_RS02370 PF07690 Major Facilitator Superfamily AL475_RS02375 PF00924 Mechanosensitive ion channel AL475_RS02380 PF02080 TrkA-C domain AL475_RS02380 PF02254 TrkA-N domain AL475_RS02385 PF02386 Cation transport protein AL475_RS02400 PF06865 Pyrimidine/purine nucleoside phosphorylase AL475_RS02410 PF07690 Major Facilitator Superfamily AL475_RS02420 PF04717 Type VI secretion system, phage-baseplate injector AL475_RS02420 PF06715 Gp5 C-terminal repeat (3 copies) AL475_RS02455 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath AL475_RS02480 PF10431 C-terminal, D2-small domain, of ClpB protein AL475_RS02480 PF17871 AAA lid domain AL475_RS02480 PF07724 AAA domain (Cdc48 subfamily) AL475_RS02480 PF00004 ATPase family associated with various cellular activities (AAA) AL475_RS02525 PF00486 Transcriptional regulatory protein, C terminal AL475_RS02525 PF00072 Response regulator receiver domain AL475_RS02530 PF05726 Pirin C-terminal cupin domain AL475_RS02530 PF02678 Pirin AL475_RS02545 PF03466 LysR substrate binding domain AL475_RS02545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS02565 PF07694 5TMR of 5TMR-LYT AL475_RS02565 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS02585 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS02595 PF01047 MarR family AL475_RS02600 PF04237 YjbR AL475_RS02605 PF01584 CheW-like domain AL475_RS02605 PF00072 Response regulator receiver domain AL475_RS02635 PF08502 LeuA allosteric (dimerisation) domain AL475_RS02635 PF00682 HMGL-like AL475_RS02645 PF00440 Bacterial regulatory proteins, tetR family AL475_RS02650 PF00892 EamA-like transporter family AL475_RS02655 PF01037 Lrp/AsnC ligand binding domain AL475_RS02660 PF00196 Bacterial regulatory proteins, luxR family AL475_RS02665 PF01906 Putative heavy-metal-binding AL475_RS02670 PF14583 Oligogalacturonate lyase AL475_RS02675 PF00474 Sodium:solute symporter family AL475_RS02680 PF01554 MatE AL475_RS02685 PF06917 Periplasmic pectate lyase AL475_RS02690 PF13416 Bacterial extracellular solute-binding protein AL475_RS02695 PF17912 MalK OB fold domain AL475_RS02695 PF03459 TOBE domain AL475_RS02695 PF00005 ABC transporter AL475_RS02700 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS02705 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS02715 PF13229 Right handed beta helix region AL475_RS02720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL475_RS02720 PF12729 Four helix bundle sensory module for signal transduction AL475_RS02720 PF00672 HAMP domain AL475_RS02725 PF01095 Pectinesterase AL475_RS02730 PF01081 KDPG and KHG aldolase AL475_RS02735 PF00294 pfkB family carbohydrate kinase AL475_RS02750 PF07883 Cupin domain AL475_RS02755 PF10688 Bacterial inner membrane protein AL475_RS02765 PF01614 Bacterial transcriptional regulator AL475_RS02765 PF09339 IclR helix-turn-helix domain AL475_RS02770 PF00571 CBS domain AL475_RS02790 PF13302 Acetyltransferase (GNAT) domain AL475_RS02800 PF00392 Bacterial regulatory proteins, gntR family AL475_RS02800 PF00155 Aminotransferase class I and II AL475_RS02810 PF03783 Curli production assembly/transport component CsgG AL475_RS02815 PF10614 Type VIII secretion system (T8SS), CsgF protein AL475_RS02840 PF08402 TOBE domain AL475_RS02840 PF00005 ABC transporter AL475_RS02845 PF01547 Bacterial extracellular solute-binding protein AL475_RS02850 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS02850 PF14785 Maltose transport system permease protein MalF P2 domain AL475_RS02855 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS02870 PF00765 Autoinducer synthase AL475_RS02875 PF03472 Autoinducer binding domain AL475_RS02875 PF00196 Bacterial regulatory proteins, luxR family AL475_RS02880 PF08220 DeoR-like helix-turn-helix domain AL475_RS02880 PF00455 DeoR C terminal sensor domain AL475_RS02900 PF05661 Protein of unknown function (DUF808) AL475_RS02905 PF05958 tRNA (Uracil-5-)-methyltransferase AL475_RS02910 PF01979 Amidohydrolase family AL475_RS02920 PF03476 MOSC N-terminal beta barrel domain AL475_RS02920 PF03473 MOSC domain AL475_RS02920 PF00111 2Fe-2S iron-sulfur cluster binding domain AL475_RS02950 PF00005 ABC transporter AL475_RS02955 PF01032 FecCD transport family AL475_RS02965 PF02472 Biopolymer transport protein ExbD/TolR AL475_RS02970 PF01618 MotA/TolQ/ExbB proton channel family AL475_RS02975 PF03544 Gram-negative bacterial TonB protein C-terminal AL475_RS02980 PF06228 Haem utilisation ChuX/HutX AL475_RS02985 PF01243 Pyridoxamine 5'-phosphate oxidase AL475_RS02990 PF02743 Cache domain AL475_RS02990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL475_RS02990 PF00672 HAMP domain AL475_RS02995 PF13520 Amino acid permease AL475_RS03000 PF13404 AsnC-type helix-turn-helix domain AL475_RS03000 PF01037 Lrp/AsnC ligand binding domain AL475_RS03010 PF03466 LysR substrate binding domain AL475_RS03010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS03025 PF03063 Prismane/CO dehydrogenase family AL475_RS03030 PF00175 Oxidoreductase NAD-binding domain AL475_RS03030 PF00111 2Fe-2S iron-sulfur cluster binding domain AL475_RS03030 PF00970 Oxidoreductase FAD-binding domain AL475_RS03035 PF00563 EAL domain AL475_RS03035 PF12792 CSS motif domain associated with EAL AL475_RS03045 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AL475_RS03045 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AL475_RS03060 PF00072 Response regulator receiver domain AL475_RS03060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL475_RS03060 PF00512 His Kinase A (phospho-acceptor) domain AL475_RS03060 PF01627 Hpt domain AL475_RS03060 PF00672 HAMP domain AL475_RS03060 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AL475_RS03065 PF00563 EAL domain AL475_RS03065 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS03065 PF03707 Bacterial signalling protein N terminal repeat AL475_RS03070 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AL475_RS03080 PF02566 OsmC-like protein AL475_RS03090 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal AL475_RS03090 PF14602 Hexapeptide repeat of succinyl-transferase AL475_RS03090 PF00132 Bacterial transferase hexapeptide (six repeats) AL475_RS03095 PF00892 EamA-like transporter family AL475_RS03110 PF03466 LysR substrate binding domain AL475_RS03110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS03125 PF00501 AMP-binding enzyme AL475_RS03145 PF00072 Response regulator receiver domain AL475_RS03145 PF00486 Transcriptional regulatory protein, C terminal AL475_RS03150 PF00512 His Kinase A (phospho-acceptor) domain AL475_RS03150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL475_RS03150 PF08521 Two-component sensor kinase N-terminal AL475_RS03155 PF03466 LysR substrate binding domain AL475_RS03155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS03160 PF13193 AMP-binding enzyme C-terminal domain AL475_RS03160 PF00501 AMP-binding enzyme AL475_RS03165 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AL475_RS03170 PF01329 Pterin 4 alpha carbinolamine dehydratase AL475_RS03175 PF01554 MatE AL475_RS03185 PF03741 Integral membrane protein TerC family AL475_RS03195 PF00583 Acetyltransferase (GNAT) family AL475_RS03200 PF00202 Aminotransferase class-III AL475_RS03205 PF06339 Ectoine synthase AL475_RS03210 PF00696 Amino acid kinase family AL475_RS03210 PF13840 ACT domain AL475_RS03225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS03225 PF03466 LysR substrate binding domain AL475_RS03235 PF11849 Domain of unknown function (DUF3369) AL475_RS03240 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS03240 PF03707 Bacterial signalling protein N terminal repeat AL475_RS03240 PF00563 EAL domain AL475_RS03245 PF00490 Delta-aminolevulinic acid dehydratase AL475_RS03255 PF00118 TCP-1/cpn60 chaperonin family AL475_RS03260 PF00166 Chaperonin 10 Kd subunit AL475_RS03265 PF03448 MgtE intracellular N domain AL475_RS03265 PF00571 CBS domain AL475_RS03265 PF01769 Divalent cation transporter AL475_RS03275 PF02743 Cache domain AL475_RS03275 PF00672 HAMP domain AL475_RS03275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL475_RS03285 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AL475_RS03290 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS03295 PF00571 CBS domain AL475_RS03295 PF00005 ABC transporter AL475_RS03305 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AL475_RS03305 PF17944 Arginine decarboxylase C-terminal helical extension AL475_RS03305 PF17810 Arginine decarboxylase helical bundle domain AL475_RS03310 PF00491 Arginase family AL475_RS03315 PF01037 Lrp/AsnC ligand binding domain AL475_RS03320 PF01053 Cys/Met metabolism PLP-dependent enzyme AL475_RS03325 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL475_RS03330 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS03335 PF00005 ABC transporter AL475_RS03340 PF07943 Penicillin-binding protein 5, C-terminal domain AL475_RS03340 PF00768 D-alanyl-D-alanine carboxypeptidase AL475_RS03355 PF00529 HlyD membrane-fusion protein of T1SS AL475_RS03355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL475_RS03365 PF00194 Eukaryotic-type carbonic anhydrase AL475_RS03375 PF00119 ATP synthase A chain AL475_RS03380 PF00137 ATP synthase subunit C AL475_RS03385 PF00430 ATP synthase B/B' CF(0) AL475_RS03390 PF00213 ATP synthase delta (OSCP) subunit AL475_RS03395 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AL475_RS03395 PF02874 ATP synthase alpha/beta family, beta-barrel domain AL475_RS03395 PF00306 ATP synthase alpha/beta chain, C terminal domain AL475_RS03400 PF00231 ATP synthase AL475_RS03405 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AL475_RS03405 PF02874 ATP synthase alpha/beta family, beta-barrel domain AL475_RS03410 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AL475_RS03410 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AL475_RS03415 PF03060 Nitronate monooxygenase AL475_RS03420 PF01810 LysE type translocator AL475_RS03425 PF00271 Helicase conserved C-terminal domain AL475_RS03425 PF00270 DEAD/DEAH box helicase AL475_RS03430 PF00072 Response regulator receiver domain AL475_RS03430 PF00158 Sigma-54 interaction domain AL475_RS03430 PF02954 Bacterial regulatory protein, Fis family AL475_RS03435 PF00512 His Kinase A (phospho-acceptor) domain AL475_RS03435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL475_RS03440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL475_RS03440 PF00672 HAMP domain AL475_RS03450 PF08267 Cobalamin-independent synthase, N-terminal domain AL475_RS03450 PF01717 Cobalamin-independent synthase, Catalytic domain AL475_RS03455 PF06826 Predicted Permease Membrane Region AL475_RS03455 PF02080 TrkA-C domain AL475_RS03460 PF00132 Bacterial transferase hexapeptide (six repeats) AL475_RS03465 PF08546 Ketopantoate reductase PanE/ApbA C terminal AL475_RS03465 PF02558 Ketopantoate reductase PanE/ApbA AL475_RS03485 PF01810 LysE type translocator AL475_RS03520 PF09350 Domain of unknown function (DUF1992) AL475_RS03530 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) AL475_RS03535 PF02253 Phospholipase A1 AL475_RS03550 PF02347 Glycine cleavage system P-protein AL475_RS03555 PF01597 Glycine cleavage H-protein AL475_RS03560 PF00464 Serine hydroxymethyltransferase AL475_RS03570 PF08669 Glycine cleavage T-protein C-terminal barrel domain AL475_RS03570 PF01571 Aminomethyltransferase folate-binding domain AL475_RS03580 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS03580 PF17158 Membrane-associated sensor, integral membrane domain AL475_RS03585 PF00563 EAL domain AL475_RS03585 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS03585 PF08447 PAS fold AL475_RS03585 PF08448 PAS fold AL475_RS03590 PF00294 pfkB family carbohydrate kinase AL475_RS03605 PF13419 Haloacid dehalogenase-like hydrolase AL475_RS03630 PF00226 DnaJ domain AL475_RS03630 PF01556 DnaJ C terminal domain AL475_RS03630 PF00684 DnaJ central domain AL475_RS03640 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS03640 PF00498 FHA domain AL475_RS03640 PF00563 EAL domain AL475_RS03645 PF12241 Trans-2-enoyl-CoA reductase catalytic region AL475_RS03645 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AL475_RS03645 PF07055 Enoyl reductase FAD binding domain AL475_RS03650 PF13472 GDSL-like Lipase/Acylhydrolase family AL475_RS03655 PF00005 ABC transporter AL475_RS03670 PF02626 Carboxyltransferase domain, subdomain A and B AL475_RS03680 PF03746 LamB/YcsF family AL475_RS03685 PF05231 MASE1 AL475_RS03685 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS03685 PF13426 PAS domain AL475_RS03685 PF00563 EAL domain AL475_RS03685 PF08448 PAS fold AL475_RS03685 PF08447 PAS fold AL475_RS03690 PF16363 GDP-mannose 4,6 dehydratase AL475_RS03695 PF12729 Four helix bundle sensory module for signal transduction AL475_RS03695 PF00672 HAMP domain AL475_RS03695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL475_RS03700 PF03222 Tryptophan/tyrosine permease family AL475_RS03705 PF04336 Acyl carrier protein phosphodiesterase AL475_RS03710 PF00270 DEAD/DEAH box helicase AL475_RS03710 PF00271 Helicase conserved C-terminal domain AL475_RS03715 PF00440 Bacterial regulatory proteins, tetR family AL475_RS03715 PF08361 MAATS-type transcriptional repressor, C-terminal region AL475_RS03720 PF00034 Cytochrome c AL475_RS03725 PF01212 Beta-eliminating lyase AL475_RS03730 PF00293 NUDIX domain AL475_RS03735 PF12592 Protein of unknown function (DUF3763) AL475_RS03735 PF07728 AAA domain (dynein-related subfamily) AL475_RS03735 PF17868 AAA lid domain AL475_RS03740 PF05762 VWA domain containing CoxE-like protein AL475_RS03755 PF07660 Secretin and TonB N terminus short domain AL475_RS03755 PF07715 TonB-dependent Receptor Plug Domain AL475_RS03755 PF00593 TonB dependent receptor AL475_RS03770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL475_RS03770 PF00672 HAMP domain AL475_RS03770 PF16591 Helical bimodular sensor domain AL475_RS03780 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AL475_RS03790 PF00535 Glycosyl transferase family 2 AL475_RS03800 PF03466 LysR substrate binding domain AL475_RS03800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS03805 PF00892 EamA-like transporter family AL475_RS03810 PF12833 Helix-turn-helix domain AL475_RS03810 PF02311 AraC-like ligand binding domain AL475_RS03835 PF01145 SPFH domain / Band 7 family AL475_RS03835 PF16200 C-terminal region of band_7 AL475_RS03845 PF00296 Luciferase-like monooxygenase AL475_RS03850 PF03466 LysR substrate binding domain AL475_RS03850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS03860 PF02634 FdhD/NarQ family AL475_RS03865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS03865 PF03466 LysR substrate binding domain AL475_RS03870 PF01062 Bestrophin, RFP-TM, chloride channel AL475_RS03875 PF00384 Molybdopterin oxidoreductase AL475_RS03880 PF01654 Cytochrome bd terminal oxidase subunit I AL475_RS03885 PF02322 Cytochrome bd terminal oxidase subunit II AL475_RS03890 PF01081 KDPG and KHG aldolase AL475_RS03895 PF00294 pfkB family carbohydrate kinase AL475_RS03900 PF02614 Glucuronate isomerase AL475_RS03905 PF08125 Mannitol dehydrogenase C-terminal domain AL475_RS03905 PF01232 Mannitol dehydrogenase Rossmann domain AL475_RS03910 PF16338 Domain of unknown function (DUF4968) AL475_RS03910 PF17137 Domain of unknown function (DUF5110) AL475_RS03910 PF01055 Glycosyl hydrolases family 31 AL475_RS03910 PF13802 Galactose mutarotase-like AL475_RS03915 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AL475_RS03920 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AL475_RS03925 PF03480 Bacterial extracellular solute-binding protein, family 7 AL475_RS03930 PF00392 Bacterial regulatory proteins, gntR family AL475_RS03930 PF07729 FCD domain AL475_RS03935 PF03786 D-mannonate dehydratase (UxuA) AL475_RS03940 PF00325 Bacterial regulatory proteins, crp family AL475_RS03940 PF04198 Putative sugar-binding domain AL475_RS03945 PF01232 Mannitol dehydrogenase Rossmann domain AL475_RS03945 PF08125 Mannitol dehydrogenase C-terminal domain AL475_RS03950 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AL475_RS03950 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AL475_RS03955 PF07690 Major Facilitator Superfamily AL475_RS03960 PF13419 Haloacid dehalogenase-like hydrolase AL475_RS03965 PF00881 Nitroreductase family AL475_RS03970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS03970 PF03466 LysR substrate binding domain AL475_RS03975 PF01168 Alanine racemase, N-terminal domain AL475_RS03975 PF00842 Alanine racemase, C-terminal domain AL475_RS03980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL475_RS03980 PF00672 HAMP domain AL475_RS03985 PF00005 ABC transporter AL475_RS03990 PF01497 Periplasmic binding protein AL475_RS03995 PF01032 FecCD transport family AL475_RS04005 PF00593 TonB dependent receptor AL475_RS04005 PF07715 TonB-dependent Receptor Plug Domain AL475_RS04025 PF02028 BCCT, betaine/carnitine/choline family transporter AL475_RS04050 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AL475_RS04050 PF18267 Rubredoxin NAD+ reductase C-terminal domain AL475_RS04050 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL475_RS04050 PF04324 BFD-like [2Fe-2S] binding domain AL475_RS04050 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AL475_RS04055 PF13806 Rieske-like [2Fe-2S] domain AL475_RS04065 PF10414 Sirohaem synthase dimerisation region AL475_RS04065 PF14824 Sirohaem biosynthesis protein central AL475_RS04065 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AL475_RS04085 PF11756 Nitrous oxide-stimulated promoter AL475_RS04090 PF07690 Major Facilitator Superfamily AL475_RS04095 PF00085 Thioredoxin AL475_RS04100 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AL475_RS04100 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AL475_RS04105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL475_RS04110 PF00873 AcrB/AcrD/AcrF family AL475_RS04115 PF02397 Bacterial sugar transferase AL475_RS04125 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AL475_RS04125 PF10531 SLBB domain AL475_RS04125 PF02563 Polysaccharide biosynthesis/export protein AL475_RS04150 PF00534 Glycosyl transferases group 1 AL475_RS04150 PF13439 Glycosyltransferase Family 4 AL475_RS04155 PF00534 Glycosyl transferases group 1 AL475_RS04155 PF13439 Glycosyltransferase Family 4 AL475_RS04165 PF08533 Beta-galactosidase C-terminal domain AL475_RS04165 PF02449 Beta-galactosidase AL475_RS04165 PF08532 Beta-galactosidase trimerisation domain AL475_RS04170 PF02754 Cysteine-rich domain AL475_RS04170 PF13183 4Fe-4S dicluster domain AL475_RS04175 PF00890 FAD binding domain AL475_RS04180 PF01266 FAD dependent oxidoreductase AL475_RS04180 PF04324 BFD-like [2Fe-2S] binding domain AL475_RS04185 PF00230 Major intrinsic protein AL475_RS04190 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AL475_RS04190 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AL475_RS04195 PF10688 Bacterial inner membrane protein AL475_RS04240 PF04984 Phage tail sheath protein subtilisin-like domain AL475_RS04240 PF17482 Phage tail sheath C-terminal domain AL475_RS04310 PF13302 Acetyltransferase (GNAT) domain AL475_RS04340 PF00132 Bacterial transferase hexapeptide (six repeats) AL475_RS04405 PF05840 Bacteriophage replication gene A protein (GPA) AL475_RS04425 PF06892 Phage regulatory protein CII (CP76) AL475_RS04450 PF04245 37-kD nucleoid-associated bacterial protein AL475_RS04475 PF00589 Phage integrase family AL475_RS04475 PF02899 Phage integrase, N-terminal SAM-like domain AL475_RS04480 PF04363 Protein of unknown function (DUF496) AL475_RS04490 PF04337 Protein of unknown function, DUF480 AL475_RS04495 PF01541 GIY-YIG catalytic domain AL475_RS04505 PF13407 Periplasmic binding protein domain AL475_RS04510 PF00072 Response regulator receiver domain AL475_RS04510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL475_RS04510 PF09308 LuxQ, periplasmic AL475_RS04510 PF00512 His Kinase A (phospho-acceptor) domain AL475_RS04530 PF07685 CobB/CobQ-like glutamine amidotransferase domain AL475_RS04530 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AL475_RS04540 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS04545 PF03459 TOBE domain AL475_RS04545 PF00005 ABC transporter AL475_RS04560 PF12805 FUSC-like inner membrane protein yccS AL475_RS04565 PF00664 ABC transporter transmembrane region AL475_RS04565 PF00005 ABC transporter AL475_RS04565 PF03412 Peptidase C39 family AL475_RS04580 PF00529 HlyD membrane-fusion protein of T1SS AL475_RS04585 PF00691 OmpA family AL475_RS04585 PF05736 OprF membrane domain AL475_RS04600 PF13361 UvrD-like helicase C-terminal domain AL475_RS04600 PF12462 DNA helicase IV / RNA helicase N terminal AL475_RS04600 PF00580 UvrD/REP helicase N-terminal domain AL475_RS04605 PF00857 Isochorismatase family AL475_RS04610 PF02142 MGS-like domain AL475_RS04615 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AL475_RS04620 PF00072 Response regulator receiver domain AL475_RS04620 PF01627 Hpt domain AL475_RS04620 PF00512 His Kinase A (phospho-acceptor) domain AL475_RS04620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL475_RS04620 PF00672 HAMP domain AL475_RS04625 PF00224 Pyruvate kinase, barrel domain AL475_RS04625 PF02887 Pyruvate kinase, alpha/beta domain AL475_RS04630 PF07690 Major Facilitator Superfamily AL475_RS04640 PF00672 HAMP domain AL475_RS04640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL475_RS04640 PF00512 His Kinase A (phospho-acceptor) domain AL475_RS04645 PF02954 Bacterial regulatory protein, Fis family AL475_RS04645 PF14532 Sigma-54 interaction domain AL475_RS04645 PF00072 Response regulator receiver domain AL475_RS04655 PF00465 Iron-containing alcohol dehydrogenase AL475_RS04660 PF12833 Helix-turn-helix domain AL475_RS04660 PF06719 AraC-type transcriptional regulator N-terminus AL475_RS04665 PF06483 Chitinase C AL475_RS04665 PF00704 Glycosyl hydrolases family 18 AL475_RS04675 PF00483 Nucleotidyl transferase AL475_RS04680 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS04700 PF13721 SecD export protein N-terminal TM region AL475_RS04700 PF02355 Protein export membrane protein AL475_RS04700 PF07549 SecD/SecF GG Motif AL475_RS04705 PF07549 SecD/SecF GG Motif AL475_RS04705 PF02355 Protein export membrane protein AL475_RS04710 PF00106 short chain dehydrogenase AL475_RS04715 PF02803 Thiolase, C-terminal domain AL475_RS04715 PF00108 Thiolase, N-terminal domain AL475_RS04725 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus AL475_RS04725 PF00561 alpha/beta hydrolase fold AL475_RS04745 PF03264 NapC/NirT cytochrome c family, N-terminal region AL475_RS04750 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) AL475_RS04755 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AL475_RS04755 PF01568 Molydopterin dinucleotide binding domain AL475_RS04755 PF00384 Molybdopterin oxidoreductase AL475_RS04770 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AL475_RS04770 PF07730 Histidine kinase AL475_RS04770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL475_RS04770 PF00672 HAMP domain AL475_RS04775 PF00196 Bacterial regulatory proteins, luxR family AL475_RS04775 PF00072 Response regulator receiver domain AL475_RS04780 PF03606 C4-dicarboxylate anaerobic carrier AL475_RS04795 PF07690 Major Facilitator Superfamily AL475_RS04800 PF17200 Single Cache domain 2 AL475_RS04800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL475_RS04800 PF00672 HAMP domain AL475_RS04805 PF13419 Haloacid dehalogenase-like hydrolase AL475_RS04810 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AL475_RS04810 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AL475_RS04820 PF00691 OmpA family AL475_RS04820 PF05736 OprF membrane domain AL475_RS04825 PF08447 PAS fold AL475_RS04825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL475_RS04830 PF00456 Transketolase, thiamine diphosphate binding domain AL475_RS04830 PF02780 Transketolase, C-terminal domain AL475_RS04830 PF02779 Transketolase, pyrimidine binding domain AL475_RS04835 PF00923 Transaldolase/Fructose-6-phosphate aldolase AL475_RS04845 PF00581 Rhodanese-like domain AL475_RS04850 PF00899 ThiF family AL475_RS04855 PF00994 Probable molybdopterin binding domain AL475_RS04855 PF03454 MoeA C-terminal region (domain IV) AL475_RS04855 PF03453 MoeA N-terminal region (domain I and II) AL475_RS04860 PF01227 GTP cyclohydrolase I AL475_RS04865 PF13520 Amino acid permease AL475_RS04870 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AL475_RS04875 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AL475_RS04880 PF12833 Helix-turn-helix domain AL475_RS04885 PF01641 SelR domain AL475_RS04885 PF01625 Peptide methionine sulfoxide reductase AL475_RS04890 PF01268 Formate--tetrahydrofolate ligase AL475_RS04900 PF03466 LysR substrate binding domain AL475_RS04900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS04905 PF13419 Haloacid dehalogenase-like hydrolase AL475_RS04910 PF01272 Transcription elongation factor, GreA/GreB, C-term AL475_RS04910 PF14760 Rnk N-terminus AL475_RS04920 PF13419 Haloacid dehalogenase-like hydrolase AL475_RS04925 PF00202 Aminotransferase class-III AL475_RS04930 PF00266 Aminotransferase class-V AL475_RS04940 PF00005 ABC transporter AL475_RS04945 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS04950 PF00392 Bacterial regulatory proteins, gntR family AL475_RS04950 PF07702 UTRA domain AL475_RS04960 PF18027 Cytosolic carboxypeptidase N-terminal domain AL475_RS04960 PF00246 Zinc carboxypeptidase AL475_RS04985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL475_RS04990 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS04995 PF12911 N-terminal TM domain of oligopeptide transport permease C AL475_RS04995 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS05000 PF00005 ABC transporter AL475_RS05000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL475_RS05005 PF00132 Bacterial transferase hexapeptide (six repeats) AL475_RS05005 PF12804 MobA-like NTP transferase domain AL475_RS05005 PF03479 Plants and Prokaryotes Conserved (PCC) domain AL475_RS05020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL475_RS05020 PF00072 Response regulator receiver domain AL475_RS05020 PF00512 His Kinase A (phospho-acceptor) domain AL475_RS05020 PF09456 RcsC Alpha-Beta-Loop (ABL) AL475_RS05025 PF00360 Phytochrome region AL475_RS05025 PF01590 GAF domain AL475_RS05025 PF00563 EAL domain AL475_RS05025 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS05030 PF00196 Bacterial regulatory proteins, luxR family AL475_RS05030 PF00072 Response regulator receiver domain AL475_RS05035 PF07694 5TMR of 5TMR-LYT AL475_RS05035 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS05050 PF05525 Branched-chain amino acid transport protein AL475_RS05065 PF08774 VRR-NUC domain AL475_RS05065 PF18081 Fanconi anemia-associated nuclease SAP domain AL475_RS05085 PF13302 Acetyltransferase (GNAT) domain AL475_RS05090 PF01799 [2Fe-2S] binding domain AL475_RS05090 PF00111 2Fe-2S iron-sulfur cluster binding domain AL475_RS05095 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AL475_RS05110 PF06719 AraC-type transcriptional regulator N-terminus AL475_RS05110 PF12833 Helix-turn-helix domain AL475_RS05130 PF00155 Aminotransferase class I and II AL475_RS05140 PF16326 ABC transporter C-terminal domain AL475_RS05140 PF00005 ABC transporter AL475_RS05140 PF12848 ABC transporter AL475_RS05145 PF01418 Helix-turn-helix domain, rpiR family AL475_RS05145 PF01380 SIS domain AL475_RS05150 PF13580 SIS domain AL475_RS05155 PF02378 Phosphotransferase system, EIIC AL475_RS05155 PF00367 phosphotransferase system, EIIB AL475_RS05160 PF07690 Major Facilitator Superfamily AL475_RS05175 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AL475_RS05180 PF00486 Transcriptional regulatory protein, C terminal AL475_RS05195 PF02567 Phenazine biosynthesis-like protein AL475_RS05220 PF00155 Aminotransferase class I and II AL475_RS05225 PF12833 Helix-turn-helix domain AL475_RS05225 PF02311 AraC-like ligand binding domain AL475_RS05230 PF01625 Peptide methionine sulfoxide reductase AL475_RS05230 PF01641 SelR domain AL475_RS05235 PF00860 Permease family AL475_RS05245 PF01177 Asp/Glu/Hydantoin racemase AL475_RS05255 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AL475_RS05265 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS05270 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS05275 PF00005 ABC transporter AL475_RS05285 PF13593 SBF-like CPA transporter family (DUF4137) AL475_RS05290 PF01425 Amidase AL475_RS05300 PF00266 Aminotransferase class-V AL475_RS05305 PF07687 Peptidase dimerisation domain AL475_RS05305 PF01546 Peptidase family M20/M25/M40 AL475_RS05320 PF01979 Amidohydrolase family AL475_RS05325 PF00576 HIUase/Transthyretin family AL475_RS05330 PF01014 Uricase AL475_RS05330 PF09349 OHCU decarboxylase AL475_RS05345 PF01799 [2Fe-2S] binding domain AL475_RS05345 PF00111 2Fe-2S iron-sulfur cluster binding domain AL475_RS05350 PF02608 ABC transporter substrate-binding protein PnrA-like AL475_RS05355 PF02653 Branched-chain amino acid transport system / permease component AL475_RS05360 PF02653 Branched-chain amino acid transport system / permease component AL475_RS05365 PF00005 ABC transporter AL475_RS05370 PF08362 YcdC-like protein, C-terminal region AL475_RS05370 PF00440 Bacterial regulatory proteins, tetR family AL475_RS05380 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS05390 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS05405 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AL475_RS05405 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AL475_RS05405 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AL475_RS05410 PF02233 NAD(P) transhydrogenase beta subunit AL475_RS05420 PF00072 Response regulator receiver domain AL475_RS05420 PF00486 Transcriptional regulatory protein, C terminal AL475_RS05435 PF03701 Uncharacterised protein family (UPF0181) AL475_RS05440 PF01253 Translation initiation factor SUI1 AL475_RS05455 PF07478 D-ala D-ala ligase C-terminus AL475_RS05455 PF01820 D-ala D-ala ligase N-terminus AL475_RS05465 PF13607 Succinyl-CoA ligase like flavodoxin domain AL475_RS05465 PF13380 CoA binding domain AL475_RS05465 PF00583 Acetyltransferase (GNAT) family AL475_RS05470 PF03466 LysR substrate binding domain AL475_RS05470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS05475 PF00593 TonB dependent receptor AL475_RS05475 PF07715 TonB-dependent Receptor Plug Domain AL475_RS05485 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL475_RS05485 PF12793 Sugar transport-related sRNA regulator N-term AL475_RS05495 PF03061 Thioesterase superfamily AL475_RS05500 PF01435 Peptidase family M48 AL475_RS05505 PF08274 PhnA Zinc-Ribbon AL475_RS05505 PF03831 PhnA domain AL475_RS05515 PF03741 Integral membrane protein TerC family AL475_RS05520 PF00149 Calcineurin-like phosphoesterase AL475_RS05520 PF02872 5'-nucleotidase, C-terminal domain AL475_RS05525 PF11398 Protein of unknown function (DUF2813) AL475_RS05530 PF06496 Protein of unknown function (DUF1097) AL475_RS05535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS05535 PF03466 LysR substrate binding domain AL475_RS05540 PF01226 Formate/nitrite transporter AL475_RS05545 PF04264 YceI-like domain AL475_RS05550 PF01292 Prokaryotic cytochrome b561 AL475_RS05575 PF13426 PAS domain AL475_RS05575 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS05575 PF00563 EAL domain AL475_RS05585 PF00384 Molybdopterin oxidoreductase AL475_RS05590 PF02634 FdhD/NarQ family AL475_RS05595 PF00042 Globin AL475_RS05595 PF00175 Oxidoreductase NAD-binding domain AL475_RS05595 PF00970 Oxidoreductase FAD-binding domain AL475_RS05600 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AL475_RS05600 PF00355 Rieske [2Fe-2S] domain AL475_RS05610 PF02028 BCCT, betaine/carnitine/choline family transporter AL475_RS05620 PF01012 Electron transfer flavoprotein domain AL475_RS05620 PF00766 Electron transfer flavoprotein FAD-binding domain AL475_RS05625 PF02754 Cysteine-rich domain AL475_RS05625 PF13183 4Fe-4S dicluster domain AL475_RS05630 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AL475_RS05645 PF01965 DJ-1/PfpI family AL475_RS05645 PF12833 Helix-turn-helix domain AL475_RS05650 PF03313 Serine dehydratase alpha chain AL475_RS05650 PF03315 Serine dehydratase beta chain AL475_RS05655 PF00551 Formyl transferase AL475_RS05660 PF04268 Sarcosine oxidase, gamma subunit family AL475_RS05665 PF01571 Aminomethyltransferase folate-binding domain AL475_RS05665 PF08669 Glycine cleavage T-protein C-terminal barrel domain AL475_RS05665 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL475_RS05665 PF17806 Sarcosine oxidase A3 domain AL475_RS05670 PF04267 Sarcosine oxidase, delta subunit family AL475_RS05675 PF01266 FAD dependent oxidoreductase AL475_RS05680 PF00464 Serine hydroxymethyltransferase AL475_RS05685 PF12833 Helix-turn-helix domain AL475_RS05690 PF00512 His Kinase A (phospho-acceptor) domain AL475_RS05690 PF01627 Hpt domain AL475_RS05690 PF00672 HAMP domain AL475_RS05690 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AL475_RS05690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL475_RS05690 PF00072 Response regulator receiver domain AL475_RS05695 PF00072 Response regulator receiver domain AL475_RS05705 PF02311 AraC-like ligand binding domain AL475_RS05705 PF12833 Helix-turn-helix domain AL475_RS05710 PF00589 Phage integrase family AL475_RS05710 PF13356 Arm DNA-binding domain AL475_RS05720 PF00816 H-NS histone family AL475_RS05725 PF00563 EAL domain AL475_RS05725 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS05725 PF13426 PAS domain AL475_RS05730 PF17200 Single Cache domain 2 AL475_RS05730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL475_RS05730 PF00672 HAMP domain AL475_RS05745 PF00563 EAL domain AL475_RS05745 PF00360 Phytochrome region AL475_RS05745 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS05745 PF01590 GAF domain AL475_RS05775 PF00196 Bacterial regulatory proteins, luxR family AL475_RS05775 PF17874 MalT-like TPR region AL475_RS05795 PF02665 Nitrate reductase gamma subunit AL475_RS05800 PF02613 Nitrate reductase delta subunit AL475_RS05805 PF13247 4Fe-4S dicluster domain AL475_RS05805 PF14711 Respiratory nitrate reductase beta C-terminal AL475_RS05810 PF00384 Molybdopterin oxidoreductase AL475_RS05810 PF01568 Molydopterin dinucleotide binding domain AL475_RS05810 PF14710 Respiratory nitrate reductase alpha N-terminal AL475_RS05815 PF07690 Major Facilitator Superfamily AL475_RS05820 PF00672 HAMP domain AL475_RS05820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL475_RS05820 PF07730 Histidine kinase AL475_RS05820 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AL475_RS05825 PF00072 Response regulator receiver domain AL475_RS05825 PF00196 Bacterial regulatory proteins, luxR family AL475_RS05830 PF04405 Domain of Unknown function (DUF542) AL475_RS05830 PF01814 Hemerythrin HHE cation binding domain AL475_RS05835 PF01769 Divalent cation transporter AL475_RS05835 PF03448 MgtE intracellular N domain AL475_RS05835 PF00571 CBS domain AL475_RS05840 PF17202 Single cache domain 3 AL475_RS05840 PF00672 HAMP domain AL475_RS05840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL475_RS05850 PF18113 Rubredoxin binding C-terminal domain AL475_RS05850 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL475_RS05855 PF00753 Metallo-beta-lactamase superfamily AL475_RS05855 PF00258 Flavodoxin AL475_RS05855 PF00301 Rubredoxin AL475_RS05860 PF00158 Sigma-54 interaction domain AL475_RS05860 PF01590 GAF domain AL475_RS05870 PF09615 CRISPR-associated protein (Cas_Csy3) AL475_RS05875 PF09614 CRISPR-associated protein (Cas_Csy2) AL475_RS05880 PF09611 CRISPR-associated protein (Cas_Csy1) AL475_RS05885 PF18019 HD domain AL475_RS05890 PF01867 CRISPR associated protein Cas1 AL475_RS05905 PF04002 RadC-like JAB domain AL475_RS05940 PF00075 RNase H AL475_RS05980 PF04717 Type VI secretion system, phage-baseplate injector AL475_RS05985 PF05638 Type VI secretion system effector, Hcp AL475_RS05995 PF01926 50S ribosome-binding GTPase AL475_RS06000 PF07683 Cobalamin synthesis protein cobW C-terminal domain AL475_RS06000 PF02492 CobW/HypB/UreG, nucleotide-binding domain AL475_RS06005 PF00654 Voltage gated chloride channel AL475_RS06015 PF00155 Aminotransferase class I and II AL475_RS06020 PF00072 Response regulator receiver domain AL475_RS06020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL475_RS06025 PF13476 AAA domain AL475_RS06030 PF00149 Calcineurin-like phosphoesterase AL475_RS06030 PF12320 Type 5 capsule protein repressor C-terminal domain AL475_RS06035 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AL475_RS06035 PF00356 Bacterial regulatory proteins, lacI family AL475_RS06040 PF00381 PTS HPr component phosphorylation site AL475_RS06040 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AL475_RS06045 PF00294 pfkB family carbohydrate kinase AL475_RS06050 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AL475_RS06050 PF02378 Phosphotransferase system, EIIC AL475_RS06055 PF08443 RimK-like ATP-grasp domain AL475_RS06055 PF18030 RimK PreATP-grasp domain AL475_RS06060 PF00155 Aminotransferase class I and II AL475_RS06070 PF13597 Anaerobic ribonucleoside-triphosphate reductase AL475_RS06070 PF03477 ATP cone domain AL475_RS06080 PF00873 AcrB/AcrD/AcrF family AL475_RS06085 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL475_RS06085 PF00529 HlyD membrane-fusion protein of T1SS AL475_RS06095 PF04143 Sulphur transport AL475_RS06110 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AL475_RS06110 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL475_RS06125 PF12833 Helix-turn-helix domain AL475_RS06125 PF06719 AraC-type transcriptional regulator N-terminus AL475_RS06135 PF12146 Serine aminopeptidase, S33 AL475_RS06140 PF12146 Serine aminopeptidase, S33 AL475_RS06145 PF06772 Bacterial low temperature requirement A protein (LtrA) AL475_RS06150 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AL475_RS06155 PF00106 short chain dehydrogenase AL475_RS06170 PF12146 Serine aminopeptidase, S33 AL475_RS06175 PF03466 LysR substrate binding domain AL475_RS06175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS06195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL475_RS06195 PF00529 HlyD membrane-fusion protein of T1SS AL475_RS06200 PF00440 Bacterial regulatory proteins, tetR family AL475_RS06215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS06215 PF03466 LysR substrate binding domain AL475_RS06220 PF01810 LysE type translocator AL475_RS06225 PF00486 Transcriptional regulatory protein, C terminal AL475_RS06225 PF00072 Response regulator receiver domain AL475_RS06235 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AL475_RS06235 PF01266 FAD dependent oxidoreductase AL475_RS06245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS06245 PF03466 LysR substrate binding domain AL475_RS06260 PF00440 Bacterial regulatory proteins, tetR family AL475_RS06265 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AL475_RS06265 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AL475_RS06270 PF01596 O-methyltransferase AL475_RS06280 PF01810 LysE type translocator AL475_RS06295 PF00857 Isochorismatase family AL475_RS06300 PF01965 DJ-1/PfpI family AL475_RS06300 PF12833 Helix-turn-helix domain AL475_RS06305 PF00583 Acetyltransferase (GNAT) family AL475_RS06315 PF01810 LysE type translocator AL475_RS06320 PF00293 NUDIX domain AL475_RS06325 PF06942 GlpM protein AL475_RS06330 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AL475_RS06330 PF01411 tRNA synthetases class II (A) AL475_RS06330 PF02272 DHHA1 domain AL475_RS06345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL475_RS06360 PF13419 Haloacid dehalogenase-like hydrolase AL475_RS06365 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL475_RS06385 PF01928 CYTH domain AL475_RS06390 PF00583 Acetyltransferase (GNAT) family AL475_RS06425 PF13649 Methyltransferase domain AL475_RS06435 PF00462 Glutaredoxin AL475_RS06435 PF08534 Redoxin AL475_RS06440 PF00892 EamA-like transporter family AL475_RS06450 PF02627 Carboxymuconolactone decarboxylase family AL475_RS06455 PF13411 MerR HTH family regulatory protein AL475_RS06520 PF09905 DNA-binding protein VF530 AL475_RS06535 PF03239 Iron permease FTR1 family AL475_RS06540 PF00453 Ribosomal protein L20 AL475_RS06545 PF01632 Ribosomal protein L35 AL475_RS06550 PF05198 Translation initiation factor IF-3, N-terminal domain AL475_RS06550 PF00707 Translation initiation factor IF-3, C-terminal domain AL475_RS06555 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AL475_RS06555 PF03129 Anticodon binding domain AL475_RS06555 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AL475_RS06555 PF02824 TGS domain AL475_RS06560 PF03880 DbpA RNA binding domain AL475_RS06560 PF00270 DEAD/DEAH box helicase AL475_RS06560 PF00271 Helicase conserved C-terminal domain AL475_RS06565 PF00773 RNB domain AL475_RS06565 PF08206 Ribonuclease B OB domain AL475_RS06565 PF00575 S1 RNA binding domain AL475_RS06575 PF12849 PBP superfamily domain AL475_RS06580 PF01575 MaoC like domain AL475_RS06585 PF03466 LysR substrate binding domain AL475_RS06585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS06590 PF00709 Adenylosuccinate synthetase AL475_RS06600 PF00486 Transcriptional regulatory protein, C terminal AL475_RS06605 PF11412 Disulphide bond corrector protein DsbC AL475_RS06605 PF02683 Cytochrome C biogenesis protein transmembrane region AL475_RS06610 PF00578 AhpC/TSA family AL475_RS06615 PF02525 Flavodoxin-like fold AL475_RS06620 PF00155 Aminotransferase class I and II AL475_RS06620 PF00392 Bacterial regulatory proteins, gntR family AL475_RS06625 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL475_RS06640 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AL475_RS06650 PF12833 Helix-turn-helix domain AL475_RS06655 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AL475_RS06655 PF02378 Phosphotransferase system, EIIC AL475_RS06655 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AL475_RS06660 PF01238 Phosphomannose isomerase type I AL475_RS06675 PF00529 HlyD membrane-fusion protein of T1SS AL475_RS06675 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL475_RS06685 PF03466 LysR substrate binding domain AL475_RS06685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS06700 PF02321 Outer membrane efflux protein AL475_RS06710 PF00005 ABC transporter AL475_RS06710 PF00664 ABC transporter transmembrane region AL475_RS06725 PF14864 Alkyl sulfatase C-terminal AL475_RS06725 PF14863 Alkyl sulfatase dimerisation AL475_RS06725 PF00753 Metallo-beta-lactamase superfamily AL475_RS06730 PF00156 Phosphoribosyl transferase domain AL475_RS06735 PF00455 DeoR C terminal sensor domain AL475_RS06735 PF08220 DeoR-like helix-turn-helix domain AL475_RS06740 PF12464 Maltose acetyltransferase AL475_RS06740 PF14602 Hexapeptide repeat of succinyl-transferase AL475_RS06745 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS06745 PF17158 Membrane-associated sensor, integral membrane domain AL475_RS06750 PF12729 Four helix bundle sensory module for signal transduction AL475_RS06750 PF00672 HAMP domain AL475_RS06750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL475_RS06755 PF00797 N-acetyltransferase AL475_RS06760 PF00842 Alanine racemase, C-terminal domain AL475_RS06760 PF01168 Alanine racemase, N-terminal domain AL475_RS06770 PF12911 N-terminal TM domain of oligopeptide transport permease C AL475_RS06770 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS06775 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS06780 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL475_RS06785 PF00005 ABC transporter AL475_RS06785 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL475_RS06790 PF03466 LysR substrate binding domain AL475_RS06790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS06795 PF00072 Response regulator receiver domain AL475_RS06800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL475_RS06800 PF00512 His Kinase A (phospho-acceptor) domain AL475_RS06800 PF01627 Hpt domain AL475_RS06800 PF00072 Response regulator receiver domain AL475_RS06810 PF01975 Survival protein SurE AL475_RS06825 PF12833 Helix-turn-helix domain AL475_RS06830 PF03807 NADP oxidoreductase coenzyme F420-dependent AL475_RS06830 PF14748 Pyrroline-5-carboxylate reductase dimerisation AL475_RS06835 PF03480 Bacterial extracellular solute-binding protein, family 7 AL475_RS06845 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AL475_RS06850 PF02423 Ornithine cyclodeaminase/mu-crystallin family AL475_RS06860 PF00474 Sodium:solute symporter family AL475_RS06865 PF03466 LysR substrate binding domain AL475_RS06865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS06870 PF13409 Glutathione S-transferase, N-terminal domain AL475_RS06875 PF02230 Phospholipase/Carboxylesterase AL475_RS06880 PF01810 LysE type translocator AL475_RS06895 PF01546 Peptidase family M20/M25/M40 AL475_RS06895 PF07687 Peptidase dimerisation domain AL475_RS06900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS06900 PF03466 LysR substrate binding domain AL475_RS06905 PF07690 Major Facilitator Superfamily AL475_RS06910 PF00005 ABC transporter AL475_RS06915 PF01032 FecCD transport family AL475_RS06920 PF01497 Periplasmic binding protein AL475_RS06925 PF03480 Bacterial extracellular solute-binding protein, family 7 AL475_RS06930 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AL475_RS06935 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AL475_RS06940 PF02614 Glucuronate isomerase AL475_RS06945 PF08125 Mannitol dehydrogenase C-terminal domain AL475_RS06945 PF01232 Mannitol dehydrogenase Rossmann domain AL475_RS06950 PF08666 SAF domain AL475_RS06950 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AL475_RS06955 PF00392 Bacterial regulatory proteins, gntR family AL475_RS06955 PF07729 FCD domain AL475_RS06975 PF00676 Dehydrogenase E1 component AL475_RS06980 PF02779 Transketolase, pyrimidine binding domain AL475_RS06980 PF02780 Transketolase, C-terminal domain AL475_RS06985 PF00364 Biotin-requiring enzyme AL475_RS06985 PF02817 e3 binding domain AL475_RS06985 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AL475_RS06990 PF01012 Electron transfer flavoprotein domain AL475_RS06990 PF00766 Electron transfer flavoprotein FAD-binding domain AL475_RS06995 PF01012 Electron transfer flavoprotein domain AL475_RS07005 PF02798 Glutathione S-transferase, N-terminal domain AL475_RS07015 PF00933 Glycosyl hydrolase family 3 N terminal domain AL475_RS07015 PF01915 Glycosyl hydrolase family 3 C-terminal domain AL475_RS07015 PF14310 Fibronectin type III-like domain AL475_RS07025 PF00005 ABC transporter AL475_RS07030 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS07035 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS07040 PF12849 PBP superfamily domain AL475_RS07050 PF12833 Helix-turn-helix domain AL475_RS07060 PF03180 NLPA lipoprotein AL475_RS07065 PF04715 Anthranilate synthase component I, N terminal region AL475_RS07065 PF00425 chorismate binding enzyme AL475_RS07065 PF00117 Glutamine amidotransferase class-I AL475_RS07070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS07070 PF03466 LysR substrate binding domain AL475_RS07075 PF00196 Bacterial regulatory proteins, luxR family AL475_RS07075 PF00072 Response regulator receiver domain AL475_RS07080 PF07730 Histidine kinase AL475_RS07080 PF17200 Single Cache domain 2 AL475_RS07085 PF03480 Bacterial extracellular solute-binding protein, family 7 AL475_RS07095 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AL475_RS07100 PF02810 SEC-C motif AL475_RS07100 PF07517 SecA DEAD-like domain AL475_RS07100 PF07516 SecA Wing and Scaffold domain AL475_RS07100 PF01043 SecA preprotein cross-linking domain AL475_RS07105 PF07690 Major Facilitator Superfamily AL475_RS07120 PF01144 Coenzyme A transferase AL475_RS07130 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AL475_RS07130 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AL475_RS07135 PF00378 Enoyl-CoA hydratase/isomerase AL475_RS07140 PF00378 Enoyl-CoA hydratase/isomerase AL475_RS07145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL475_RS07145 PF02770 Acyl-CoA dehydrogenase, middle domain AL475_RS07145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL475_RS07150 PF00171 Aldehyde dehydrogenase family AL475_RS07155 PF00108 Thiolase, N-terminal domain AL475_RS07155 PF02803 Thiolase, C-terminal domain AL475_RS07160 PF09278 MerR, DNA binding AL475_RS07160 PF00376 MerR family regulatory protein AL475_RS07165 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL475_RS07165 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL475_RS07165 PF02770 Acyl-CoA dehydrogenase, middle domain AL475_RS07170 PF01039 Carboxyl transferase domain AL475_RS07175 PF00378 Enoyl-CoA hydratase/isomerase AL475_RS07180 PF00682 HMGL-like AL475_RS07190 PF00578 AhpC/TSA family AL475_RS07190 PF10417 C-terminal domain of 1-Cys peroxiredoxin AL475_RS07195 PF13192 Thioredoxin domain AL475_RS07195 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL475_RS07200 PF01979 Amidohydrolase family AL475_RS07215 PF00561 alpha/beta hydrolase fold AL475_RS07225 PF12833 Helix-turn-helix domain AL475_RS07230 PF00465 Iron-containing alcohol dehydrogenase AL475_RS07235 PF01966 HD domain AL475_RS07250 PF00300 Histidine phosphatase superfamily (branch 1) AL475_RS07305 PF00871 Acetokinase family AL475_RS07315 PF00593 TonB dependent receptor AL475_RS07315 PF07715 TonB-dependent Receptor Plug Domain AL475_RS07320 PF12833 Helix-turn-helix domain AL475_RS07325 PF00005 ABC transporter AL475_RS07330 PF01032 FecCD transport family AL475_RS07335 PF01032 FecCD transport family AL475_RS07355 PF05547 Immune inhibitor A peptidase M6 AL475_RS07355 PF00801 PKD domain AL475_RS07360 PF03280 Proteobacterial lipase chaperone protein AL475_RS07365 PF00561 alpha/beta hydrolase fold AL475_RS07370 PF00672 HAMP domain AL475_RS07370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL475_RS07375 PF01037 Lrp/AsnC ligand binding domain AL475_RS07375 PF13404 AsnC-type helix-turn-helix domain AL475_RS07395 PF07690 Major Facilitator Superfamily AL475_RS07405 PF00672 HAMP domain AL475_RS07405 PF12729 Four helix bundle sensory module for signal transduction AL475_RS07405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL475_RS07420 PF02540 NAD synthase AL475_RS07425 PF03605 Anaerobic c4-dicarboxylate membrane transporter AL475_RS07430 PF04397 LytTr DNA-binding domain AL475_RS07430 PF00072 Response regulator receiver domain AL475_RS07435 PF07694 5TMR of 5TMR-LYT AL475_RS07435 PF06580 Histidine kinase AL475_RS07440 PF00248 Aldo/keto reductase family AL475_RS07455 PF00128 Alpha amylase, catalytic domain AL475_RS07460 PF03413 Peptidase propeptide and YPEB domain AL475_RS07460 PF01447 Thermolysin metallopeptidase, catalytic domain AL475_RS07460 PF07504 Fungalysin/Thermolysin Propeptide Motif AL475_RS07460 PF04151 Bacterial pre-peptidase C-terminal domain AL475_RS07460 PF02868 Thermolysin metallopeptidase, alpha-helical domain AL475_RS07465 PF03922 OmpW family AL475_RS07470 PF00011 Hsp20/alpha crystallin family AL475_RS07480 PF01042 Endoribonuclease L-PSP AL475_RS07490 PF01844 HNH endonuclease AL475_RS07500 PF00005 ABC transporter AL475_RS07500 PF00664 ABC transporter transmembrane region AL475_RS07505 PF00005 ABC transporter AL475_RS07505 PF00664 ABC transporter transmembrane region AL475_RS07515 PF00563 EAL domain AL475_RS07515 PF12792 CSS motif domain associated with EAL AL475_RS07520 PF04138 GtrA-like protein AL475_RS07530 PF00912 Transglycosylase AL475_RS07540 PF01327 Polypeptide deformylase AL475_RS07550 PF00155 Aminotransferase class I and II AL475_RS07550 PF00392 Bacterial regulatory proteins, gntR family AL475_RS07555 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AL475_RS07555 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AL475_RS07560 PF01925 Sulfite exporter TauE/SafE AL475_RS07565 PF17848 Acetyl-coA carboxylase zinc finger domain AL475_RS07565 PF01039 Carboxyl transferase domain AL475_RS07570 PF03466 LysR substrate binding domain AL475_RS07570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS07595 PF00483 Nucleotidyl transferase AL475_RS07615 PF00107 Zinc-binding dehydrogenase AL475_RS07615 PF08240 Alcohol dehydrogenase GroES-like domain AL475_RS07620 PF00155 Aminotransferase class I and II AL475_RS07625 PF00171 Aldehyde dehydrogenase family AL475_RS07630 PF00158 Sigma-54 interaction domain AL475_RS07630 PF02954 Bacterial regulatory protein, Fis family AL475_RS07630 PF01590 GAF domain AL475_RS07635 PF03466 LysR substrate binding domain AL475_RS07635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS07640 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL475_RS07670 PF01966 HD domain AL475_RS07675 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AL475_RS07675 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AL475_RS07680 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AL475_RS07685 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AL475_RS07685 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AL475_RS07695 PF02743 Cache domain AL475_RS07695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL475_RS07695 PF00672 HAMP domain AL475_RS07700 PF03466 LysR substrate binding domain AL475_RS07700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS07715 PF02574 Homocysteine S-methyltransferase AL475_RS07715 PF00809 Pterin binding enzyme AL475_RS07715 PF02310 B12 binding domain AL475_RS07715 PF02965 Vitamin B12 dependent methionine synthase, activation domain AL475_RS07715 PF02607 B12 binding domain AL475_RS07720 PF13520 Amino acid permease AL475_RS07730 PF03466 LysR substrate binding domain AL475_RS07730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS07735 PF07687 Peptidase dimerisation domain AL475_RS07735 PF01546 Peptidase family M20/M25/M40 AL475_RS07740 PF03806 AbgT putative transporter family AL475_RS07745 PF02595 Glycerate kinase family AL475_RS07750 PF02447 GntP family permease AL475_RS07755 PF17853 GGDEF-like domain AL475_RS07755 PF13556 PucR C-terminal helix-turn-helix domain AL475_RS07755 PF05651 Putative sugar diacid recognition AL475_RS07760 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AL475_RS07760 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AL475_RS07765 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL475_RS07765 PF12793 Sugar transport-related sRNA regulator N-term AL475_RS07780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL475_RS07780 PF02743 Cache domain AL475_RS07780 PF00672 HAMP domain AL475_RS07795 PF00672 HAMP domain AL475_RS07795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL475_RS07795 PF02743 Cache domain AL475_RS07800 PF00375 Sodium:dicarboxylate symporter family AL475_RS07805 PF01042 Endoribonuclease L-PSP AL475_RS07840 PF04972 BON domain AL475_RS07840 PF00263 Bacterial type II and III secretion system protein AL475_RS07840 PF13629 Pilus formation protein N terminal region AL475_RS07845 PF00437 Type II/IV secretion system protein AL475_RS07875 PF03960 ArsC family AL475_RS07880 PF01758 Sodium Bile acid symporter family AL475_RS07895 PF00478 IMP dehydrogenase / GMP reductase domain AL475_RS07905 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AL475_RS07905 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AL475_RS07910 PF01256 Carbohydrate kinase AL475_RS07910 PF03853 YjeF-related protein N-terminus AL475_RS07920 PF00486 Transcriptional regulatory protein, C terminal AL475_RS07920 PF00072 Response regulator receiver domain AL475_RS07940 PF03889 Alternative ribosome-rescue factor A AL475_RS07945 PF00313 'Cold-shock' DNA-binding domain AL475_RS07950 PF07152 YaeQ protein AL475_RS07955 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS07960 PF00970 Oxidoreductase FAD-binding domain AL475_RS07960 PF00042 Globin AL475_RS07960 PF00175 Oxidoreductase NAD-binding domain AL475_RS07965 PF00384 Molybdopterin oxidoreductase AL475_RS07965 PF01568 Molydopterin dinucleotide binding domain AL475_RS07965 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AL475_RS07970 PF13247 4Fe-4S dicluster domain AL475_RS07985 PF00909 Ammonium Transporter Family AL475_RS07990 PF02146 Sir2 family AL475_RS07995 PF13416 Bacterial extracellular solute-binding protein AL475_RS08000 PF13416 Bacterial extracellular solute-binding protein AL475_RS08005 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS08010 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS08015 PF08402 TOBE domain AL475_RS08015 PF00005 ABC transporter AL475_RS08035 PF01171 PP-loop family AL475_RS08040 PF00582 Universal stress protein family AL475_RS08045 PF00027 Cyclic nucleotide-binding domain AL475_RS08045 PF13545 Crp-like helix-turn-helix domain AL475_RS08060 PF00403 Heavy-metal-associated domain AL475_RS08070 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AL475_RS08070 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AL475_RS08085 PF00115 Cytochrome C and Quinol oxidase polypeptide I AL475_RS08100 PF00072 Response regulator receiver domain AL475_RS08100 PF09308 LuxQ, periplasmic AL475_RS08100 PF00512 His Kinase A (phospho-acceptor) domain AL475_RS08100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL475_RS08105 PF01566 Natural resistance-associated macrophage protein AL475_RS08185 PF06303 MatP N-terminal domain AL475_RS08185 PF17414 MatP C-terminal ribbon-helix-helix domain AL475_RS08190 PF05362 Lon protease (S16) C-terminal proteolytic domain AL475_RS08190 PF13654 AAA domain AL475_RS08195 PF07977 FabA-like domain AL475_RS08200 PF04957 Ribosome modulation factor AL475_RS08210 PF00005 ABC transporter AL475_RS08210 PF16326 ABC transporter C-terminal domain AL475_RS08210 PF12848 ABC transporter AL475_RS08220 PF02926 THUMP domain AL475_RS08220 PF10672 S-adenosylmethionine-dependent methyltransferase AL475_RS08220 PF01170 Putative RNA methylase family UPF0020 AL475_RS08225 PF07126 Cell-division protein ZapC AL475_RS08230 PF01180 Dihydroorotate dehydrogenase AL475_RS08235 PF05088 Bacterial NAD-glutamate dehydrogenase AL475_RS08245 PF01433 Peptidase family M1 domain AL475_RS08245 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AL475_RS08245 PF11940 Domain of unknown function (DUF3458) Ig-like fold AL475_RS08260 PF00595 PDZ domain AL475_RS08260 PF17804 Tail specific protease N-terminal domain AL475_RS08260 PF03572 Peptidase family S41 AL475_RS08260 PF11818 C-terminal domain of tail specific protease (DUF3340) AL475_RS08265 PF17516 ProQ C-terminal domain AL475_RS08265 PF04352 ProQ/FINO family AL475_RS08270 PF13185 GAF domain AL475_RS08275 PF00005 ABC transporter AL475_RS08275 PF00664 ABC transporter transmembrane region AL475_RS08280 PF04403 Paraquat-inducible protein A AL475_RS08285 PF02470 MlaD protein AL475_RS08290 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF AL475_RS08290 PF01189 16S rRNA methyltransferase RsmB/F AL475_RS08290 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF AL475_RS08295 PF13509 S1 domain AL475_RS08295 PF17783 CvfB-like winged helix domain AL475_RS08310 PF02896 PEP-utilising enzyme, TIM barrel domain AL475_RS08310 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AL475_RS08310 PF00391 PEP-utilising enzyme, mobile domain AL475_RS08315 PF00793 DAHP synthetase I family AL475_RS08320 PF04461 Protein of unknown function (DUF520) AL475_RS08325 PF01641 SelR domain AL475_RS08335 PF01235 Sodium:alanine symporter family AL475_RS08360 PF16671 Actin cross-linking domain AL475_RS08360 PF04717 Type VI secretion system, phage-baseplate injector AL475_RS08365 PF05638 Type VI secretion system effector, Hcp AL475_RS08370 PF02074 Carboxypeptidase Taq (M32) metallopeptidase AL475_RS08380 PF04408 Helicase associated domain (HA2) AL475_RS08380 PF00270 DEAD/DEAH box helicase AL475_RS08380 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AL475_RS08380 PF00271 Helicase conserved C-terminal domain AL475_RS08380 PF11898 Domain of unknown function (DUF3418) AL475_RS08385 PF02525 Flavodoxin-like fold AL475_RS08395 PF03264 NapC/NirT cytochrome c family, N-terminal region AL475_RS08420 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS08430 PF00012 Hsp70 protein AL475_RS08435 PF00012 Hsp70 protein AL475_RS08440 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS08440 PF05230 MASE2 domain AL475_RS08450 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS08465 PF13417 Glutathione S-transferase, N-terminal domain AL475_RS08465 PF04399 Glutaredoxin 2, C terminal domain AL475_RS08475 PF07859 alpha/beta hydrolase fold AL475_RS08485 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS08485 PF00072 Response regulator receiver domain AL475_RS08495 PF01568 Molydopterin dinucleotide binding domain AL475_RS08495 PF18364 Molybdopterin oxidoreductase N-terminal domain AL475_RS08495 PF00384 Molybdopterin oxidoreductase AL475_RS08500 PF03264 NapC/NirT cytochrome c family, N-terminal region AL475_RS08505 PF06508 Queuosine biosynthesis protein QueC AL475_RS08510 PF04055 Radical SAM superfamily AL475_RS08520 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AL475_RS08520 PF14824 Sirohaem biosynthesis protein central AL475_RS08520 PF10414 Sirohaem synthase dimerisation region AL475_RS08525 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL475_RS08530 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS08535 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS08540 PF00005 ABC transporter AL475_RS08545 PF01027 Inhibitor of apoptosis-promoting Bax1 AL475_RS08550 PF04358 DsrC like protein AL475_RS08555 PF00708 Acylphosphatase AL475_RS08560 PF17785 PUA-like domain AL475_RS08560 PF10672 S-adenosylmethionine-dependent methyltransferase AL475_RS08565 PF06433 Methylamine dehydrogenase heavy chain (MADH) AL475_RS08575 PF00578 AhpC/TSA family AL475_RS08580 PF02975 Methylamine dehydrogenase, L chain AL475_RS08585 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AL475_RS08585 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AL475_RS08605 PF00141 Peroxidase AL475_RS08610 PF00512 His Kinase A (phospho-acceptor) domain AL475_RS08610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL475_RS08610 PF00672 HAMP domain AL475_RS08615 PF00072 Response regulator receiver domain AL475_RS08615 PF00486 Transcriptional regulatory protein, C terminal AL475_RS08620 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AL475_RS08620 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AL475_RS08630 PF05552 Conserved TM helix AL475_RS08630 PF00924 Mechanosensitive ion channel AL475_RS08635 PF01699 Sodium/calcium exchanger protein AL475_RS08650 PF13426 PAS domain AL475_RS08650 PF08447 PAS fold AL475_RS08650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL475_RS08665 PF00313 'Cold-shock' DNA-binding domain AL475_RS08710 PF00072 Response regulator receiver domain AL475_RS08710 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS08720 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AL475_RS08720 PF03714 Bacterial pullanase-associated domain AL475_RS08720 PF18494 Pullulanase Ins domain AL475_RS08720 PF11852 Domain of unknown function (DUF3372) AL475_RS08720 PF17967 Pullulanase N2 domain AL475_RS08725 PF01584 CheW-like domain AL475_RS08725 PF00072 Response regulator receiver domain AL475_RS08735 PF12431 Transcriptional regulator AL475_RS08735 PF00072 Response regulator receiver domain AL475_RS08740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL475_RS08740 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AL475_RS08740 PF17203 Single cache domain 3 AL475_RS08740 PF00989 PAS fold AL475_RS08755 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL475_RS08775 PF04204 Homoserine O-succinyltransferase AL475_RS08790 PF05971 RNA methyltransferase AL475_RS08795 PF01863 Protein of unknown function DUF45 AL475_RS08805 PF03466 LysR substrate binding domain AL475_RS08805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS08855 PF00005 ABC transporter AL475_RS08860 PF01032 FecCD transport family AL475_RS08865 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AL475_RS08875 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AL475_RS08880 PF02654 Cobalamin-5-phosphate synthase AL475_RS08885 PF02277 Phosphoribosyltransferase AL475_RS08890 PF01613 Flavin reductase like domain AL475_RS08895 PF13460 NAD(P)H-binding AL475_RS08900 PF00375 Sodium:dicarboxylate symporter family AL475_RS08910 PF08411 Exonuclease C-terminal AL475_RS08910 PF00929 Exonuclease AL475_RS08915 PF03788 LrgA family AL475_RS08920 PF04172 LrgB-like family AL475_RS08925 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AL475_RS08925 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region AL475_RS08930 PF03707 Bacterial signalling protein N terminal repeat AL475_RS08930 PF00563 EAL domain AL475_RS08930 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS08930 PF13188 PAS domain AL475_RS08950 PF02222 ATP-grasp domain AL475_RS08955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL475_RS08955 PF08447 PAS fold AL475_RS08955 PF13426 PAS domain AL475_RS08960 PF05724 Thiopurine S-methyltransferase (TPMT) AL475_RS08965 PF05488 PAAR motif AL475_RS08970 PF00216 Bacterial DNA-binding protein AL475_RS08975 PF03483 B3/4 domain AL475_RS08975 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AL475_RS08975 PF03484 tRNA synthetase B5 domain AL475_RS08975 PF03147 Ferredoxin-fold anticodon binding domain AL475_RS08975 PF01588 Putative tRNA binding domain AL475_RS08980 PF01409 tRNA synthetases class II core domain (F) AL475_RS08980 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AL475_RS08990 PF03466 LysR substrate binding domain AL475_RS08990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS08995 PF00072 Response regulator receiver domain AL475_RS08995 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS09000 PF07995 Glucose / Sorbosone dehydrogenase AL475_RS09030 PF01066 CDP-alcohol phosphatidyltransferase AL475_RS09035 PF02151 UvrB/uvrC motif AL475_RS09035 PF08459 UvrC Helix-hairpin-helix N-terminal AL475_RS09035 PF01541 GIY-YIG catalytic domain AL475_RS09040 PF00196 Bacterial regulatory proteins, luxR family AL475_RS09040 PF00072 Response regulator receiver domain AL475_RS09045 PF03104 DNA polymerase family B, exonuclease domain AL475_RS09045 PF00136 DNA polymerase family B AL475_RS09050 PF13426 PAS domain AL475_RS09050 PF00563 EAL domain AL475_RS09050 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS09060 PF08207 Elongation factor P (EF-P) KOW-like domain AL475_RS09060 PF09285 Elongation factor P, C-terminal AL475_RS09060 PF01132 Elongation factor P (EF-P) OB domain AL475_RS09065 PF04269 Protein of unknown function, DUF440 AL475_RS09070 PF04266 ASCH domain AL475_RS09075 PF00392 Bacterial regulatory proteins, gntR family AL475_RS09075 PF07702 UTRA domain AL475_RS09080 PF01979 Amidohydrolase family AL475_RS09085 PF00491 Arginase family AL475_RS09090 PF17391 Urocanase N-terminal domain AL475_RS09090 PF17392 Urocanase C-terminal domain AL475_RS09090 PF01175 Urocanase Rossmann-like domain AL475_RS09095 PF00221 Aromatic amino acid lyase AL475_RS09110 PF04191 Phospholipid methyltransferase AL475_RS09115 PF01565 FAD binding domain AL475_RS09115 PF02913 FAD linked oxidases, C-terminal domain AL475_RS09115 PF13183 4Fe-4S dicluster domain AL475_RS09130 PF13488 Glycine zipper AL475_RS09130 PF00691 OmpA family AL475_RS09150 PF01259 SAICAR synthetase AL475_RS09155 PF00202 Aminotransferase class-III AL475_RS09160 PF00171 Aldehyde dehydrogenase family AL475_RS09165 PF04371 Porphyromonas-type peptidyl-arginine deiminase AL475_RS09170 PF00795 Carbon-nitrogen hydrolase AL475_RS09175 PF01266 FAD dependent oxidoreductase AL475_RS09180 PF00171 Aldehyde dehydrogenase family AL475_RS09185 PF01381 Helix-turn-helix AL475_RS09185 PF07883 Cupin domain AL475_RS09190 PF07722 Peptidase C26 AL475_RS09195 PF00120 Glutamine synthetase, catalytic domain AL475_RS09200 PF03553 Na+/H+ antiporter family AL475_RS09205 PF13533 Biotin-lipoyl like AL475_RS09215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS09215 PF03466 LysR substrate binding domain AL475_RS09230 PF00270 DEAD/DEAH box helicase AL475_RS09230 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AL475_RS09230 PF04408 Helicase associated domain (HA2) AL475_RS09230 PF00271 Helicase conserved C-terminal domain AL475_RS09230 PF11898 Domain of unknown function (DUF3418) AL475_RS09235 PF03949 Malic enzyme, NAD binding domain AL475_RS09235 PF00390 Malic enzyme, N-terminal domain AL475_RS09250 PF00144 Beta-lactamase AL475_RS09270 PF03466 LysR substrate binding domain AL475_RS09270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS09290 PF00293 NUDIX domain AL475_RS09290 PF13344 Haloacid dehalogenase-like hydrolase AL475_RS09300 PF09278 MerR, DNA binding AL475_RS09300 PF00376 MerR family regulatory protein AL475_RS09310 PF02698 DUF218 domain AL475_RS09320 PF09339 IclR helix-turn-helix domain AL475_RS09320 PF01614 Bacterial transcriptional regulator AL475_RS09325 PF09339 IclR helix-turn-helix domain AL475_RS09325 PF01614 Bacterial transcriptional regulator AL475_RS09330 PF00171 Aldehyde dehydrogenase family AL475_RS09335 PF00465 Iron-containing alcohol dehydrogenase AL475_RS09340 PF00266 Aminotransferase class-V AL475_RS09360 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL475_RS09365 PF00664 ABC transporter transmembrane region AL475_RS09365 PF00005 ABC transporter AL475_RS09370 PF00005 ABC transporter AL475_RS09370 PF00664 ABC transporter transmembrane region AL475_RS09385 PF01479 S4 domain AL475_RS09385 PF00849 RNA pseudouridylate synthase AL475_RS09390 PF01300 Telomere recombination AL475_RS09395 PF02811 PHP domain AL475_RS09405 PF00425 chorismate binding enzyme AL475_RS09405 PF04715 Anthranilate synthase component I, N terminal region AL475_RS09410 PF00117 Glutamine amidotransferase class-I AL475_RS09415 PF00591 Glycosyl transferase family, a/b domain AL475_RS09415 PF02885 Glycosyl transferase family, helical bundle domain AL475_RS09420 PF00218 Indole-3-glycerol phosphate synthase AL475_RS09420 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AL475_RS09425 PF00291 Pyridoxal-phosphate dependent enzyme AL475_RS09430 PF00290 Tryptophan synthase alpha chain AL475_RS09435 PF00375 Sodium:dicarboxylate symporter family AL475_RS09445 PF04279 Intracellular septation protein A AL475_RS09450 PF03061 Thioesterase superfamily AL475_RS09455 PF03795 YCII-related domain AL475_RS09465 PF08267 Cobalamin-independent synthase, N-terminal domain AL475_RS09465 PF01717 Cobalamin-independent synthase, Catalytic domain AL475_RS09470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS09470 PF03466 LysR substrate binding domain AL475_RS09485 PF05193 Peptidase M16 inactive domain AL475_RS09485 PF00675 Insulinase (Peptidase family M16) AL475_RS09505 PF00043 Glutathione S-transferase, C-terminal domain AL475_RS09505 PF02798 Glutathione S-transferase, N-terminal domain AL475_RS09510 PF13417 Glutathione S-transferase, N-terminal domain AL475_RS09510 PF00043 Glutathione S-transferase, C-terminal domain AL475_RS09515 PF00563 EAL domain AL475_RS09515 PF00196 Bacterial regulatory proteins, luxR family AL475_RS09520 PF12729 Four helix bundle sensory module for signal transduction AL475_RS09520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL475_RS09520 PF00672 HAMP domain AL475_RS09535 PF01177 Asp/Glu/Hydantoin racemase AL475_RS09540 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL475_RS09545 PF00512 His Kinase A (phospho-acceptor) domain AL475_RS09545 PF00989 PAS fold AL475_RS09545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL475_RS09545 PF00672 HAMP domain AL475_RS09550 PF00486 Transcriptional regulatory protein, C terminal AL475_RS09550 PF00072 Response regulator receiver domain AL475_RS09565 PF03358 NADPH-dependent FMN reductase AL475_RS09570 PF00005 ABC transporter AL475_RS09570 PF12848 ABC transporter AL475_RS09575 PF11842 Domain of unknown function (DUF3362) AL475_RS09575 PF08497 Radical SAM N-terminal AL475_RS09575 PF04055 Radical SAM superfamily AL475_RS09580 PF00266 Aminotransferase class-V AL475_RS09590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL475_RS09590 PF00512 His Kinase A (phospho-acceptor) domain AL475_RS09590 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL475_RS09605 PF04994 TfoX C-terminal domain AL475_RS09605 PF04993 TfoX N-terminal domain AL475_RS09615 PF03956 Lysine exporter LysO AL475_RS09625 PF00282 Pyridoxal-dependent decarboxylase conserved domain AL475_RS09630 PF01380 SIS domain AL475_RS09630 PF01418 Helix-turn-helix domain, rpiR family AL475_RS09635 PF00465 Iron-containing alcohol dehydrogenase AL475_RS09635 PF00171 Aldehyde dehydrogenase family AL475_RS09640 PF00462 Glutaredoxin AL475_RS09645 PF02080 TrkA-C domain AL475_RS09645 PF06826 Predicted Permease Membrane Region AL475_RS09650 PF07055 Enoyl reductase FAD binding domain AL475_RS09650 PF12241 Trans-2-enoyl-CoA reductase catalytic region AL475_RS09650 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AL475_RS09655 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL475_RS09655 PF02770 Acyl-CoA dehydrogenase, middle domain AL475_RS09655 PF09317 Domain of unknown function (DUF1974) AL475_RS09655 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL475_RS09660 PF00440 Bacterial regulatory proteins, tetR family AL475_RS09660 PF16295 Tetracyclin repressor-like, C-terminal domain AL475_RS09675 PF00171 Aldehyde dehydrogenase family AL475_RS09685 PF06610 L-alanine exporter AL475_RS09690 PF09308 LuxQ, periplasmic AL475_RS09690 PF00072 Response regulator receiver domain AL475_RS09690 PF00512 His Kinase A (phospho-acceptor) domain AL475_RS09690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL475_RS09700 PF02445 Quinolinate synthetase A protein AL475_RS09705 PF16331 TolA binding protein trimerisation AL475_RS09705 PF13174 Tetratricopeptide repeat AL475_RS09710 PF00691 OmpA family AL475_RS09715 PF07676 WD40-like Beta Propeller Repeat AL475_RS09715 PF04052 TolB amino-terminal domain AL475_RS09725 PF02472 Biopolymer transport protein ExbD/TolR AL475_RS09730 PF01618 MotA/TolQ/ExbB proton channel family AL475_RS09735 PF03061 Thioesterase superfamily AL475_RS09745 PF08173 Membrane bound YbgT-like protein AL475_RS09750 PF02322 Cytochrome bd terminal oxidase subunit II AL475_RS09755 PF01654 Cytochrome bd terminal oxidase subunit I AL475_RS09760 PF05496 Holliday junction DNA helicase RuvB P-loop domain AL475_RS09760 PF05491 RuvB C-terminal winged helix domain AL475_RS09760 PF17864 RuvB AAA lid domain AL475_RS09765 PF07499 RuvA, C-terminal domain AL475_RS09765 PF01330 RuvA N terminal domain AL475_RS09770 PF02075 Crossover junction endodeoxyribonuclease RuvC AL475_RS09775 PF01406 tRNA synthetases class I (C) catalytic domain AL475_RS09775 PF09190 DALR domain AL475_RS09780 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AL475_RS09785 PF00149 Calcineurin-like phosphoesterase AL475_RS09790 PF00563 EAL domain AL475_RS09790 PF08668 HDOD domain AL475_RS09795 PF02810 SEC-C motif AL475_RS09800 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) AL475_RS09805 PF13609 Gram-negative porin AL475_RS09810 PF13307 Helicase C-terminal domain AL475_RS09810 PF06733 DEAD_2 AL475_RS09815 PF07445 Primosomal replication protein priC AL475_RS09820 PF10689 Protein of unknown function (DUF2496) AL475_RS09825 PF00672 HAMP domain AL475_RS09825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL475_RS09825 PF02743 Cache domain AL475_RS09830 PF03372 Endonuclease/Exonuclease/phosphatase family AL475_RS09835 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS09840 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS09845 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL475_RS09850 PF00005 ABC transporter AL475_RS09860 PF02901 Pyruvate formate lyase-like AL475_RS09860 PF01228 Glycine radical AL475_RS09870 PF00672 HAMP domain AL475_RS09870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL475_RS09875 PF04055 Radical SAM superfamily AL475_RS09885 PF03887 YfbU domain AL475_RS09895 PF08298 PrkA AAA domain AL475_RS09895 PF06798 PrkA serine protein kinase C-terminal domain AL475_RS09900 PF04285 Protein of unknown function (DUF444) AL475_RS09905 PF04293 SpoVR like protein AL475_RS09910 PF02348 Cytidylyltransferase AL475_RS09915 PF03966 Trm112p-like protein AL475_RS09920 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AL475_RS09925 PF00005 ABC transporter AL475_RS09925 PF00664 ABC transporter transmembrane region AL475_RS09930 PF13567 Domain of unknown function (DUF4131) AL475_RS09930 PF00753 Metallo-beta-lactamase superfamily AL475_RS09930 PF03772 Competence protein AL475_RS09940 PF02687 FtsX-like permease family AL475_RS09940 PF12704 MacB-like periplasmic core domain AL475_RS09945 PF00005 ABC transporter AL475_RS09950 PF12704 MacB-like periplasmic core domain AL475_RS09950 PF02687 FtsX-like permease family AL475_RS09960 PF00270 DEAD/DEAH box helicase AL475_RS09960 PF00271 Helicase conserved C-terminal domain AL475_RS09960 PF17757 UvrB interaction domain AL475_RS09960 PF02559 CarD-like/TRCF domain AL475_RS09960 PF03461 TRCF domain AL475_RS09970 PF13302 Acetyltransferase (GNAT) domain AL475_RS09975 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL475_RS09980 PF05728 Uncharacterised protein family (UPF0227) AL475_RS09985 PF01636 Phosphotransferase enzyme family AL475_RS09990 PF08139 Prokaryotic membrane lipoprotein lipid attachment site AL475_RS09990 PF13036 Peptidoglycan-synthase activator LpoB AL475_RS10005 PF01230 HIT domain AL475_RS10010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL475_RS10010 PF00672 HAMP domain AL475_RS10020 PF07840 FadR C-terminal domain AL475_RS10020 PF00392 Bacterial regulatory proteins, gntR family AL475_RS10025 PF06450 Bacterial Na+/H+ antiporter B (NhaB) AL475_RS10030 PF02600 Disulfide bond formation protein DsbB AL475_RS10035 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AL475_RS10035 PF17854 FtsK alpha domain AL475_RS10035 PF01580 FtsK/SpoIIIE family AL475_RS10035 PF09397 Ftsk gamma domain AL475_RS10040 PF01037 Lrp/AsnC ligand binding domain AL475_RS10045 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AL475_RS10045 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AL475_RS10055 PF03466 LysR substrate binding domain AL475_RS10055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS10065 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AL475_RS10070 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AL475_RS10075 PF18073 Rubredoxin metal binding domain AL475_RS10080 PF06305 Lipopolysaccharide assembly protein A domain AL475_RS10085 PF00216 Bacterial DNA-binding protein AL475_RS10090 PF00575 S1 RNA binding domain AL475_RS10095 PF02224 Cytidylate kinase AL475_RS10105 PF13145 PPIC-type PPIASE domain AL475_RS10110 PF00216 Bacterial DNA-binding protein AL475_RS10115 PF05362 Lon protease (S16) C-terminal proteolytic domain AL475_RS10115 PF02190 ATP-dependent protease La (LON) substrate-binding domain AL475_RS10115 PF00004 ATPase family associated with various cellular activities (AAA) AL475_RS10120 PF10431 C-terminal, D2-small domain, of ClpB protein AL475_RS10120 PF07724 AAA domain (Cdc48 subfamily) AL475_RS10120 PF06689 ClpX C4-type zinc finger AL475_RS10125 PF00574 Clp protease AL475_RS10130 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AL475_RS10130 PF05698 Bacterial trigger factor protein (TF) C-terminus AL475_RS10130 PF05697 Bacterial trigger factor protein (TF) AL475_RS10140 PF00512 His Kinase A (phospho-acceptor) domain AL475_RS10140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL475_RS10145 PF00072 Response regulator receiver domain AL475_RS10145 PF02954 Bacterial regulatory protein, Fis family AL475_RS10145 PF00158 Sigma-54 interaction domain AL475_RS10150 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AL475_RS10155 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AL475_RS10160 PF03480 Bacterial extracellular solute-binding protein, family 7 AL475_RS10165 PF00082 Subtilase family AL475_RS10165 PF05922 Peptidase inhibitor I9 AL475_RS10170 PF01547 Bacterial extracellular solute-binding protein AL475_RS10175 PF00512 His Kinase A (phospho-acceptor) domain AL475_RS10175 PF00672 HAMP domain AL475_RS10175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL475_RS10180 PF00486 Transcriptional regulatory protein, C terminal AL475_RS10180 PF00072 Response regulator receiver domain AL475_RS10185 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AL475_RS10190 PF03313 Serine dehydratase alpha chain AL475_RS10190 PF03315 Serine dehydratase beta chain AL475_RS10200 PF00583 Acetyltransferase (GNAT) family AL475_RS10200 PF00795 Carbon-nitrogen hydrolase AL475_RS10210 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS10210 PF00563 EAL domain AL475_RS10210 PF00498 FHA domain AL475_RS10230 PF00175 Oxidoreductase NAD-binding domain AL475_RS10230 PF00970 Oxidoreductase FAD-binding domain AL475_RS10255 PF00072 Response regulator receiver domain AL475_RS10255 PF00196 Bacterial regulatory proteins, luxR family AL475_RS10260 PF05231 MASE1 AL475_RS10260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL475_RS10260 PF07730 Histidine kinase AL475_RS10265 PF07690 Major Facilitator Superfamily AL475_RS10275 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS10280 PF00005 ABC transporter AL475_RS10280 PF08402 TOBE domain AL475_RS10360 PF01381 Helix-turn-helix AL475_RS10370 PF07804 HipA-like C-terminal domain AL475_RS10370 PF13657 HipA N-terminal domain AL475_RS10390 PF02386 Cation transport protein AL475_RS10395 PF02080 TrkA-C domain AL475_RS10395 PF02254 TrkA-N domain AL475_RS10400 PF02386 Cation transport protein AL475_RS10405 PF00072 Response regulator receiver domain AL475_RS10405 PF00486 Transcriptional regulatory protein, C terminal AL475_RS10410 PF00512 His Kinase A (phospho-acceptor) domain AL475_RS10410 PF02702 Osmosensitive K+ channel His kinase sensor domain AL475_RS10410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL475_RS10410 PF13493 Domain of unknown function (DUF4118) AL475_RS10415 PF05552 Conserved TM helix AL475_RS10415 PF00924 Mechanosensitive ion channel AL475_RS10420 PF02424 ApbE family AL475_RS10425 PF01699 Sodium/calcium exchanger protein AL475_RS10430 PF02673 Bacitracin resistance protein BacA AL475_RS10435 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AL475_RS10440 PF01810 LysE type translocator AL475_RS10450 PF01810 LysE type translocator AL475_RS10465 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AL475_RS10465 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AL475_RS10470 PF07662 Na+ dependent nucleoside transporter C-terminus AL475_RS10470 PF01773 Na+ dependent nucleoside transporter N-terminus AL475_RS10470 PF07670 Nucleoside recognition AL475_RS10475 PF03466 LysR substrate binding domain AL475_RS10475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS10480 PF13406 Transglycosylase SLT domain AL475_RS10485 PF05166 YcgL domain AL475_RS10495 PF03775 Septum formation inhibitor MinC, C-terminal domain AL475_RS10495 PF05209 Septum formation inhibitor MinC, N-terminal domain AL475_RS10500 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AL475_RS10505 PF03776 Septum formation topological specificity factor MinE AL475_RS10515 PF00570 HRDC domain AL475_RS10515 PF01612 3'-5' exonuclease AL475_RS10520 PF00501 AMP-binding enzyme AL475_RS10520 PF13193 AMP-binding enzyme C-terminal domain AL475_RS10540 PF00814 Glycoprotease family AL475_RS10545 PF13307 Helicase C-terminal domain AL475_RS10545 PF04851 Type III restriction enzyme, res subunit AL475_RS10555 PF01842 ACT domain AL475_RS10555 PF00551 Formyl transferase AL475_RS10560 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL475_RS10560 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AL475_RS10565 PF01343 Peptidase family S49 AL475_RS10570 PF00710 Asparaginase, N-terminal AL475_RS10570 PF17763 Glutaminase/Asparaginase C-terminal domain AL475_RS10575 PF07023 Protein of unknown function (DUF1315) AL475_RS10585 PF01641 SelR domain AL475_RS10590 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AL475_RS10590 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AL475_RS10595 PF01263 Aldose 1-epimerase AL475_RS10600 PF13847 Methyltransferase domain AL475_RS10620 PF03692 Putative zinc- or iron-chelating domain AL475_RS10625 PF03692 Putative zinc- or iron-chelating domain AL475_RS10630 PF00230 Major intrinsic protein AL475_RS10635 PF13662 Toprim domain AL475_RS10635 PF02132 RecR protein AL475_RS10640 PF02575 YbaB/EbfC DNA-binding family AL475_RS10645 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AL475_RS10645 PF12170 DNA polymerase III tau subunit V interacting with alpha AL475_RS10645 PF12169 DNA polymerase III subunits gamma and tau domain III AL475_RS10650 PF00156 Phosphoribosyl transferase domain AL475_RS10655 PF04304 Protein of unknown function (DUF454) AL475_RS10665 PF00072 Response regulator receiver domain AL475_RS10670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS10670 PF03466 LysR substrate binding domain AL475_RS10675 PF00881 Nitroreductase family AL475_RS10680 PF00378 Enoyl-CoA hydratase/isomerase AL475_RS10680 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AL475_RS10680 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AL475_RS10685 PF02803 Thiolase, C-terminal domain AL475_RS10685 PF00108 Thiolase, N-terminal domain AL475_RS10690 PF08281 Sigma-70, region 4 AL475_RS10690 PF04542 Sigma-70 region 2 AL475_RS10700 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AL475_RS10705 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AL475_RS10710 PF01451 Low molecular weight phosphotyrosine protein phosphatase AL475_RS10720 PF08447 PAS fold AL475_RS10720 PF13426 PAS domain AL475_RS10720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL475_RS10725 PF12557 Cob(I)alamin adenosyltransferase N terminal AL475_RS10725 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AL475_RS10730 PF05170 AsmA family AL475_RS10735 PF00485 Phosphoribulokinase / Uridine kinase family AL475_RS10740 PF10609 NUBPL iron-transfer P-loop NTPase AL475_RS10745 PF01588 Putative tRNA binding domain AL475_RS10745 PF09334 tRNA synthetases class I (M) AL475_RS10755 PF01048 Phosphorylase superfamily AL475_RS10760 PF00403 Heavy-metal-associated domain AL475_RS10765 PF01743 Poly A polymerase head domain AL475_RS10765 PF02272 DHHA1 domain AL475_RS10765 PF01368 DHH family AL475_RS10765 PF00571 CBS domain AL475_RS10770 PF08448 PAS fold AL475_RS10770 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS10775 PF02391 MoaE protein AL475_RS10780 PF02597 ThiS family AL475_RS10785 PF01967 MoaC family AL475_RS10790 PF00994 Probable molybdopterin binding domain AL475_RS10795 PF06463 Molybdenum Cofactor Synthesis C AL475_RS10795 PF04055 Radical SAM superfamily AL475_RS10800 PF01933 Uncharacterised protein family UPF0052 AL475_RS10805 PF01627 Hpt domain AL475_RS10810 PF02954 Bacterial regulatory protein, Fis family AL475_RS10810 PF00072 Response regulator receiver domain AL475_RS10810 PF00158 Sigma-54 interaction domain AL475_RS10815 PF00271 Helicase conserved C-terminal domain AL475_RS10815 PF04851 Type III restriction enzyme, res subunit AL475_RS10815 PF12344 Ultra-violet resistance protein B AL475_RS10815 PF17757 UvrB interaction domain AL475_RS10815 PF02151 UvrB/uvrC motif AL475_RS10825 PF02508 Rnf-Nqr subunit, membrane protein AL475_RS10830 PF04060 Putative Fe-S cluster AL475_RS10840 PF03116 NQR2, RnfD, RnfE family AL475_RS10845 PF04205 FMN-binding domain AL475_RS10850 PF02508 Rnf-Nqr subunit, membrane protein AL475_RS10855 PF10576 Iron-sulfur binding domain of endonuclease III AL475_RS10855 PF00633 Helix-hairpin-helix motif AL475_RS10855 PF00730 HhH-GPD superfamily base excision DNA repair protein AL475_RS10860 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL475_RS10865 PF10952 Protein of unknown function (DUF2753) AL475_RS10870 PF00691 OmpA family AL475_RS10870 PF18393 MotY N-terminal domain AL475_RS10875 PF00929 Exonuclease AL475_RS10880 PF13726 Na+-H+ antiporter family AL475_RS10880 PF03553 Na+/H+ antiporter family AL475_RS10885 PF00156 Phosphoribosyl transferase domain AL475_RS10890 PF02674 Colicin V production protein AL475_RS10895 PF05036 Sporulation related domain AL475_RS10900 PF02875 Mur ligase family, glutamate ligase domain AL475_RS10900 PF08245 Mur ligase middle domain AL475_RS10905 PF01039 Carboxyl transferase domain AL475_RS10905 PF17848 Acetyl-coA carboxylase zinc finger domain AL475_RS10910 PF01416 tRNA pseudouridine synthase AL475_RS10920 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AL475_RS10920 PF00749 tRNA synthetases class I (E and Q), catalytic domain AL475_RS10925 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AL475_RS10925 PF02378 Phosphotransferase system, EIIC AL475_RS10925 PF00367 phosphotransferase system, EIIB AL475_RS10930 PF01979 Amidohydrolase family AL475_RS10935 PF01047 MarR family AL475_RS10935 PF00480 ROK family AL475_RS10940 PF00999 Sodium/hydrogen exchanger family AL475_RS10940 PF02254 TrkA-N domain AL475_RS10945 PF00733 Asparagine synthase AL475_RS10945 PF13537 Glutamine amidotransferase domain AL475_RS10950 PF02357 Transcription termination factor nusG AL475_RS10955 PF00854 POT family AL475_RS10960 PF00762 Ferrochelatase AL475_RS10965 PF05191 Adenylate kinase, active site lid AL475_RS10970 PF00183 Hsp90 protein AL475_RS10970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL475_RS10975 PF00486 Transcriptional regulatory protein, C terminal AL475_RS10980 PF17323 Trans-membrane regulatory protein ToxS AL475_RS10990 PF12850 Calcineurin-like phosphoesterase superfamily domain AL475_RS11005 PF07556 Protein of unknown function (DUF1538) AL475_RS11010 PF07556 Protein of unknown function (DUF1538) AL475_RS11015 PF01370 NAD dependent epimerase/dehydratase family AL475_RS11015 PF08338 Domain of unknown function (DUF1731) AL475_RS11020 PF00106 short chain dehydrogenase AL475_RS11030 PF00085 Thioredoxin AL475_RS11035 PF16200 C-terminal region of band_7 AL475_RS11035 PF01145 SPFH domain / Band 7 family AL475_RS11045 PF13411 MerR HTH family regulatory protein AL475_RS11055 PF13609 Gram-negative porin AL475_RS11060 PF12826 Helix-hairpin-helix motif AL475_RS11060 PF00533 BRCA1 C Terminus (BRCT) domain AL475_RS11060 PF01653 NAD-dependent DNA ligase adenylation domain AL475_RS11060 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AL475_RS11060 PF03120 NAD-dependent DNA ligase OB-fold domain AL475_RS11065 PF04354 ZipA, C-terminal FtsZ-binding domain AL475_RS11075 PF00291 Pyridoxal-phosphate dependent enzyme AL475_RS11085 PF00381 PTS HPr component phosphorylation site AL475_RS11090 PF05524 PEP-utilising enzyme, N-terminal AL475_RS11090 PF02896 PEP-utilising enzyme, TIM barrel domain AL475_RS11090 PF00391 PEP-utilising enzyme, mobile domain AL475_RS11095 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AL475_RS11100 PF01494 FAD binding domain AL475_RS11105 PF01938 TRAM domain AL475_RS11105 PF04055 Radical SAM superfamily AL475_RS11105 PF00919 Uncharacterized protein family UPF0004 AL475_RS11110 PF02562 PhoH-like protein AL475_RS11115 PF02130 Uncharacterized protein family UPF0054 AL475_RS11120 PF03471 Transporter associated domain AL475_RS11120 PF00571 CBS domain AL475_RS11125 PF00795 Carbon-nitrogen hydrolase AL475_RS11130 PF07295 Zinc-ribbon containing domain AL475_RS11135 PF13603 Leucyl-tRNA synthetase, Domain 2 AL475_RS11135 PF08264 Anticodon-binding domain of tRNA AL475_RS11135 PF00133 tRNA synthetases class I (I, L, M and V) AL475_RS11140 PF04390 Lipopolysaccharide-assembly AL475_RS11145 PF14840 Processivity clamp loader gamma complex DNA pol III C-term AL475_RS11145 PF06144 DNA polymerase III, delta subunit AL475_RS11155 PF02590 Predicted SPOUT methyltransferase AL475_RS11160 PF03717 Penicillin-binding Protein dimerisation domain AL475_RS11160 PF00905 Penicillin binding protein transpeptidase domain AL475_RS11165 PF01098 Cell cycle protein AL475_RS11170 PF03330 Lytic transglycolase AL475_RS11170 PF05036 Sporulation related domain AL475_RS11175 PF07943 Penicillin-binding protein 5, C-terminal domain AL475_RS11175 PF00768 D-alanyl-D-alanine carboxypeptidase AL475_RS11180 PF04359 Protein of unknown function (DUF493) AL475_RS11185 PF03099 Biotin/lipoate A/B protein ligase family AL475_RS11190 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AL475_RS11190 PF04055 Radical SAM superfamily AL475_RS11200 PF00464 Serine hydroxymethyltransferase AL475_RS11210 PF00873 AcrB/AcrD/AcrF family AL475_RS11215 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL475_RS11245 PF00356 Bacterial regulatory proteins, lacI family AL475_RS11260 PF00005 ABC transporter AL475_RS11260 PF09383 NIL domain AL475_RS11265 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS11270 PF03180 NLPA lipoprotein AL475_RS11275 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) AL475_RS11280 PF07348 Syd protein (SUKH-2) AL475_RS11285 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AL475_RS11285 PF14489 QueF-like protein AL475_RS11295 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS11300 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases AL475_RS11300 PF03641 Possible lysine decarboxylase AL475_RS11300 PF11892 Domain of unknown function (DUF3412) AL475_RS11305 PF01367 5'-3' exonuclease, C-terminal SAM fold AL475_RS11305 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AL475_RS11310 PF18125 RlmM ferredoxin-like domain AL475_RS11310 PF01728 FtsJ-like methyltransferase AL475_RS11315 PF04241 Protein of unknown function (DUF423) AL475_RS11325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS11325 PF03466 LysR substrate binding domain AL475_RS11330 PF02926 THUMP domain AL475_RS11330 PF02568 Thiamine biosynthesis protein (ThiI) AL475_RS11335 PF00691 OmpA family AL475_RS11335 PF13677 Membrane MotB of proton-channel complex MotA/MotB AL475_RS11340 PF01618 MotA/TolQ/ExbB proton channel family AL475_RS11345 PF02609 Exonuclease VII small subunit AL475_RS11350 PF00348 Polyprenyl synthetase AL475_RS11355 PF02780 Transketolase, C-terminal domain AL475_RS11355 PF02779 Transketolase, pyrimidine binding domain AL475_RS11355 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AL475_RS11360 PF00849 RNA pseudouridylate synthase AL475_RS11365 PF04287 tRNA pseudouridine synthase C AL475_RS11390 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AL475_RS11395 PF03806 AbgT putative transporter family AL475_RS11400 PF00444 Ribosomal protein L36 AL475_RS11405 PF01197 Ribosomal protein L31 AL475_RS11410 PF18389 TrmO C-terminal domain AL475_RS11410 PF01980 tRNA-methyltransferase O AL475_RS11415 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AL475_RS11415 PF03129 Anticodon binding domain AL475_RS11415 PF04073 Aminoacyl-tRNA editing domain AL475_RS11425 PF06786 Uncharacterised protein family (UPF0253) AL475_RS11435 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AL475_RS11435 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AL475_RS11435 PF02769 AIR synthase related protein, C-terminal domain AL475_RS11440 PF01464 Transglycosylase SLT domain AL475_RS11440 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL475_RS11445 PF14437 MafB19-like deaminase AL475_RS11450 PF03466 LysR substrate binding domain AL475_RS11450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS11455 PF08240 Alcohol dehydrogenase GroES-like domain AL475_RS11455 PF00107 Zinc-binding dehydrogenase AL475_RS11460 PF00756 Putative esterase AL475_RS11465 PF03806 AbgT putative transporter family AL475_RS11485 PF12019 Type II transport protein GspH AL475_RS11485 PF07963 Prokaryotic N-terminal methylation motif AL475_RS11495 PF00226 DnaJ domain AL475_RS11495 PF01556 DnaJ C terminal domain AL475_RS11495 PF00684 DnaJ central domain AL475_RS11500 PF00012 Hsp70 protein AL475_RS11505 PF00375 Sodium:dicarboxylate symporter family AL475_RS11510 PF01025 GrpE AL475_RS11515 PF01513 ATP-NAD kinase AL475_RS11520 PF02463 RecF/RecN/SMC N terminal domain AL475_RS11525 PF04355 SmpA / OmlA family AL475_RS11530 PF03658 RnfH family Ubiquitin AL475_RS11535 PF03364 Polyketide cyclase / dehydrase and lipid transport AL475_RS11540 PF01668 SmpB protein AL475_RS11550 PF13356 Arm DNA-binding domain AL475_RS11550 PF00589 Phage integrase family AL475_RS11565 PF01555 DNA methylase AL475_RS11565 PF18273 Type III R-M EcoP15I C-terminal domain AL475_RS11570 PF00271 Helicase conserved C-terminal domain AL475_RS11570 PF00176 SNF2 family N-terminal domain AL475_RS11585 PF04002 RadC-like JAB domain AL475_RS11620 PF07510 Protein of unknown function (DUF1524) AL475_RS11655 PF00075 RNase H AL475_RS11695 PF00271 Helicase conserved C-terminal domain AL475_RS11695 PF08463 EcoEI R protein C-terminal AL475_RS11695 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) AL475_RS11695 PF04851 Type III restriction enzyme, res subunit AL475_RS11725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS11725 PF03466 LysR substrate binding domain AL475_RS11730 PF01266 FAD dependent oxidoreductase AL475_RS11735 PF01235 Sodium:alanine symporter family AL475_RS11740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS11740 PF03466 LysR substrate binding domain AL475_RS11745 PF07687 Peptidase dimerisation domain AL475_RS11745 PF01546 Peptidase family M20/M25/M40 AL475_RS11750 PF07690 Major Facilitator Superfamily AL475_RS11755 PF01758 Sodium Bile acid symporter family AL475_RS11760 PF01184 GPR1/FUN34/yaaH family AL475_RS11765 PF00704 Glycosyl hydrolases family 18 AL475_RS11765 PF06483 Chitinase C AL475_RS11780 PF13361 UvrD-like helicase C-terminal domain AL475_RS11780 PF00580 UvrD/REP helicase N-terminal domain AL475_RS11815 PF03432 Relaxase/Mobilisation nuclease domain AL475_RS11815 PF18821 Large polyvalent protein-associated domain 7 AL475_RS11840 PF01119 DNA mismatch repair protein, C-terminal domain AL475_RS11840 PF08676 MutL C terminal dimerisation domain AL475_RS11845 PF13356 Arm DNA-binding domain AL475_RS11845 PF00589 Phage integrase family AL475_RS11850 PF00958 GMP synthase C terminal domain AL475_RS11850 PF00117 Glutamine amidotransferase class-I AL475_RS11850 PF02540 NAD synthase AL475_RS11855 PF00571 CBS domain AL475_RS11855 PF00478 IMP dehydrogenase / GMP reductase domain AL475_RS11860 PF13742 OB-fold nucleic acid binding domain AL475_RS11860 PF02601 Exonuclease VII, large subunit AL475_RS11875 PF01926 50S ribosome-binding GTPase AL475_RS11875 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AL475_RS11880 PF13360 PQQ-like domain AL475_RS11885 PF09976 Tetratricopeptide repeat-like domain AL475_RS11890 PF03129 Anticodon binding domain AL475_RS11890 PF13393 Histidyl-tRNA synthetase AL475_RS11895 PF04551 GcpE protein AL475_RS11900 PF13464 Domain of unknown function (DUF4115) AL475_RS11905 PF04055 Radical SAM superfamily AL475_RS11910 PF00334 Nucleoside diphosphate kinase AL475_RS11915 PF00883 Cytosol aminopeptidase family, catalytic domain AL475_RS11915 PF12404 Peptidase AL475_RS11920 PF04384 Iron-sulphur cluster assembly AL475_RS11925 PF00111 2Fe-2S iron-sulfur cluster binding domain AL475_RS11930 PF00012 Hsp70 protein AL475_RS11935 PF07743 HSCB C-terminal oligomerisation domain AL475_RS11935 PF00226 DnaJ domain AL475_RS11940 PF01521 Iron-sulphur cluster biosynthesis AL475_RS11945 PF01592 NifU-like N terminal domain AL475_RS11950 PF00266 Aminotransferase class-V AL475_RS11955 PF02082 Transcriptional regulator AL475_RS11960 PF00588 SpoU rRNA Methylase family AL475_RS11965 PF00459 Inositol monophosphatase family AL475_RS11970 PF00857 Isochorismatase family AL475_RS11975 PF07549 SecD/SecF GG Motif AL475_RS11975 PF02355 Protein export membrane protein AL475_RS11980 PF02355 Protein export membrane protein AL475_RS11980 PF13721 SecD export protein N-terminal TM region AL475_RS11980 PF07549 SecD/SecF GG Motif AL475_RS11985 PF02699 Preprotein translocase subunit AL475_RS11990 PF01702 Queuine tRNA-ribosyltransferase AL475_RS11995 PF02547 Queuosine biosynthesis protein AL475_RS12000 PF00571 CBS domain AL475_RS12005 PF00463 Isocitrate lyase family AL475_RS12010 PF01274 Malate synthase AL475_RS12015 PF03466 LysR substrate binding domain AL475_RS12015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS12020 PF00578 AhpC/TSA family AL475_RS12020 PF10417 C-terminal domain of 1-Cys peroxiredoxin AL475_RS12025 PF03932 CutC family AL475_RS12030 PF03976 Polyphosphate kinase 2 (PPK2) AL475_RS12035 PF01895 PhoU domain AL475_RS12040 PF00005 ABC transporter AL475_RS12045 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS12050 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS12060 PF13090 Polyphosphate kinase C-terminal domain 2 AL475_RS12060 PF02503 Polyphosphate kinase middle domain AL475_RS12060 PF17941 Polyphosphate kinase C-terminal domain 1 AL475_RS12060 PF13089 Polyphosphate kinase N-terminal domain AL475_RS12065 PF02541 Ppx/GppA phosphatase family AL475_RS12070 PF12849 PBP superfamily domain AL475_RS12075 PF00512 His Kinase A (phospho-acceptor) domain AL475_RS12075 PF11808 Phosphate regulon sensor protein PhoR AL475_RS12075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL475_RS12075 PF00989 PAS fold AL475_RS12080 PF00072 Response regulator receiver domain AL475_RS12080 PF00486 Transcriptional regulatory protein, C terminal AL475_RS12085 PF04381 Putative exonuclease, RdgC AL475_RS12090 PF16325 Peptidase family U32 C-terminal domain AL475_RS12090 PF01136 Peptidase family U32 AL475_RS12095 PF12838 4Fe-4S dicluster domain AL475_RS12100 PF07690 Major Facilitator Superfamily AL475_RS12110 PF04542 Sigma-70 region 2 AL475_RS12110 PF04545 Sigma-70, region 4 AL475_RS12120 PF03502 Nucleoside-specific channel-forming protein, Tsx AL475_RS12125 PF08546 Ketopantoate reductase PanE/ApbA C terminal AL475_RS12125 PF02558 Ketopantoate reductase PanE/ApbA AL475_RS12130 PF01965 DJ-1/PfpI family AL475_RS12135 PF00266 Aminotransferase class-V AL475_RS12145 PF02657 Fe-S metabolism associated domain AL475_RS12150 PF00899 ThiF family AL475_RS12155 PF06725 3D domain AL475_RS12155 PF03562 MltA specific insert domain AL475_RS12165 PF00696 Amino acid kinase family AL475_RS12165 PF00583 Acetyltransferase (GNAT) family AL475_RS12175 PF13538 UvrD-like helicase C-terminal domain AL475_RS12180 PF00580 UvrD/REP helicase N-terminal domain AL475_RS12180 PF13361 UvrD-like helicase C-terminal domain AL475_RS12180 PF12705 PD-(D/E)XK nuclease superfamily AL475_RS12185 PF17946 RecC C-terminal domain AL475_RS12195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS12195 PF03466 LysR substrate binding domain AL475_RS12200 PF07130 YebG protein AL475_RS12205 PF14602 Hexapeptide repeat of succinyl-transferase AL475_RS12205 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle AL475_RS12210 PF00962 Adenosine/AMP deaminase AL475_RS12220 PF00583 Acetyltransferase (GNAT) family AL475_RS12225 PF02080 TrkA-C domain AL475_RS12225 PF08443 RimK-like ATP-grasp domain AL475_RS12225 PF18030 RimK PreATP-grasp domain AL475_RS12230 PF01544 CorA-like Mg2+ transporter protein AL475_RS12240 PF01588 Putative tRNA binding domain AL475_RS12245 PF01263 Aldose 1-epimerase AL475_RS12255 PF02417 Chromate transporter AL475_RS12260 PF11849 Domain of unknown function (DUF3369) AL475_RS12280 PF00437 Type II/IV secretion system protein AL475_RS12310 PF00263 Bacterial type II and III secretion system protein AL475_RS12310 PF04972 BON domain AL475_RS12310 PF13629 Pilus formation protein N terminal region AL475_RS12335 PF02311 AraC-like ligand binding domain AL475_RS12335 PF12833 Helix-turn-helix domain AL475_RS12340 PF00501 AMP-binding enzyme AL475_RS12350 PF03466 LysR substrate binding domain AL475_RS12350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS12360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS12360 PF03466 LysR substrate binding domain AL475_RS12365 PF03144 Elongation factor Tu domain 2 AL475_RS12365 PF14492 Elongation Factor G, domain II AL475_RS12365 PF00679 Elongation factor G C-terminus AL475_RS12365 PF00009 Elongation factor Tu GTP binding domain AL475_RS12365 PF03764 Elongation factor G, domain IV AL475_RS12370 PF18073 Rubredoxin metal binding domain AL475_RS12380 PF18429 Domain of unknown function (DUF5609) AL475_RS12390 PF01048 Phosphorylase superfamily AL475_RS12395 PF01676 Metalloenzyme superfamily AL475_RS12400 PF02885 Glycosyl transferase family, helical bundle domain AL475_RS12400 PF00591 Glycosyl transferase family, a/b domain AL475_RS12400 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AL475_RS12405 PF01791 DeoC/LacD family aldolase AL475_RS12415 PF07670 Nucleoside recognition AL475_RS12415 PF01773 Na+ dependent nucleoside transporter N-terminus AL475_RS12415 PF07662 Na+ dependent nucleoside transporter C-terminus AL475_RS12420 PF02608 ABC transporter substrate-binding protein PnrA-like AL475_RS12425 PF00005 ABC transporter AL475_RS12430 PF02653 Branched-chain amino acid transport system / permease component AL475_RS12435 PF02653 Branched-chain amino acid transport system / permease component AL475_RS12440 PF01026 TatD related DNase AL475_RS12445 PF03883 Peroxide stress protein YaaA AL475_RS12450 PF01235 Sodium:alanine symporter family AL475_RS12465 PF03167 Uracil DNA glycosylase superfamily AL475_RS12470 PF01261 Xylose isomerase-like TIM barrel AL475_RS12475 PF01228 Glycine radical AL475_RS12480 PF14821 Threonine synthase N terminus AL475_RS12480 PF00291 Pyridoxal-phosphate dependent enzyme AL475_RS12485 PF00288 GHMP kinases N terminal domain AL475_RS12485 PF08544 GHMP kinases C terminal AL475_RS12490 PF13840 ACT domain AL475_RS12490 PF03447 Homoserine dehydrogenase, NAD binding domain AL475_RS12490 PF00742 Homoserine dehydrogenase AL475_RS12490 PF01842 ACT domain AL475_RS12490 PF00696 Amino acid kinase family AL475_RS12505 PF03737 Aldolase/RraA AL475_RS12520 PF00072 Response regulator receiver domain AL475_RS12520 PF00486 Transcriptional regulatory protein, C terminal AL475_RS12530 PF00512 His Kinase A (phospho-acceptor) domain AL475_RS12530 PF18415 Histidine kinase receptor ArcB trans-membrane domain AL475_RS12530 PF01627 Hpt domain AL475_RS12530 PF00989 PAS fold AL475_RS12530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL475_RS12530 PF00072 Response regulator receiver domain AL475_RS12535 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS12535 PF00360 Phytochrome region AL475_RS12535 PF00563 EAL domain AL475_RS12535 PF01590 GAF domain AL475_RS12540 PF04055 Radical SAM superfamily AL475_RS12540 PF16199 Radical_SAM C-terminal domain AL475_RS12545 PF04898 Glutamate synthase central domain AL475_RS12545 PF00310 Glutamine amidotransferases class-II AL475_RS12545 PF01645 Conserved region in glutamate synthase AL475_RS12545 PF01493 GXGXG motif AL475_RS12550 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AL475_RS12550 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL475_RS12555 PF00310 Glutamine amidotransferases class-II AL475_RS12555 PF04898 Glutamate synthase central domain AL475_RS12555 PF01645 Conserved region in glutamate synthase AL475_RS12555 PF01493 GXGXG motif AL475_RS12560 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL475_RS12560 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AL475_RS12570 PF01048 Phosphorylase superfamily AL475_RS12580 PF01497 Periplasmic binding protein AL475_RS12585 PF03458 UPF0126 domain AL475_RS12605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS12605 PF03466 LysR substrate binding domain AL475_RS12610 PF01925 Sulfite exporter TauE/SafE AL475_RS12615 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AL475_RS12615 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AL475_RS12615 PF02142 MGS-like domain AL475_RS12620 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AL475_RS12620 PF00117 Glutamine amidotransferase class-I AL475_RS12625 PF05173 Dihydrodipicolinate reductase, C-terminus AL475_RS12625 PF01113 Dihydrodipicolinate reductase, N-terminus AL475_RS12630 PF00293 NUDIX domain AL475_RS12635 PF02810 SEC-C motif AL475_RS12635 PF01043 SecA preprotein cross-linking domain AL475_RS12635 PF07516 SecA Wing and Scaffold domain AL475_RS12635 PF07517 SecA DEAD-like domain AL475_RS12645 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AL475_RS12650 PF12327 FtsZ family, C-terminal domain AL475_RS12650 PF00091 Tubulin/FtsZ family, GTPase domain AL475_RS12655 PF02491 SHS2 domain inserted in FTSA AL475_RS12660 PF08478 POTRA domain, FtsQ-type AL475_RS12660 PF03799 Cell division protein FtsQ AL475_RS12665 PF01225 Mur ligase family, catalytic domain AL475_RS12665 PF02875 Mur ligase family, glutamate ligase domain AL475_RS12665 PF08245 Mur ligase middle domain AL475_RS12670 PF04101 Glycosyltransferase family 28 C-terminal domain AL475_RS12670 PF03033 Glycosyltransferase family 28 N-terminal domain AL475_RS12675 PF01098 Cell cycle protein AL475_RS12680 PF08245 Mur ligase middle domain AL475_RS12680 PF02875 Mur ligase family, glutamate ligase domain AL475_RS12685 PF00953 Glycosyl transferase family 4 AL475_RS12685 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AL475_RS12690 PF02875 Mur ligase family, glutamate ligase domain AL475_RS12690 PF01225 Mur ligase family, catalytic domain AL475_RS12690 PF08245 Mur ligase middle domain AL475_RS12695 PF01225 Mur ligase family, catalytic domain AL475_RS12695 PF08245 Mur ligase middle domain AL475_RS12695 PF02875 Mur ligase family, glutamate ligase domain AL475_RS12700 PF03717 Penicillin-binding Protein dimerisation domain AL475_RS12700 PF00905 Penicillin binding protein transpeptidase domain AL475_RS12705 PF04999 Cell division protein FtsL AL475_RS12710 PF01795 MraW methylase family AL475_RS12720 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AL475_RS12725 PF04348 LppC putative lipoprotein AL475_RS12730 PF02021 Uncharacterised protein family UPF0102 AL475_RS12735 PF13580 SIS domain AL475_RS12740 PF04972 BON domain AL475_RS12745 PF04386 Stringent starvation protein B AL475_RS12750 PF02798 Glutathione S-transferase, N-terminal domain AL475_RS12750 PF00043 Glutathione S-transferase, C-terminal domain AL475_RS12755 PF02167 Cytochrome C1 family AL475_RS12760 PF00032 Cytochrome b(C-terminal)/b6/petD AL475_RS12760 PF00033 Cytochrome b/b6/petB AL475_RS12765 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AL475_RS12765 PF00355 Rieske [2Fe-2S] domain AL475_RS12770 PF00380 Ribosomal protein S9/S16 AL475_RS12775 PF00572 Ribosomal protein L13 AL475_RS12785 PF03969 AFG1-like ATPase AL475_RS12790 PF06295 Protein of unknown function (DUF1043) AL475_RS12795 PF00595 PDZ domain AL475_RS12795 PF13180 PDZ domain AL475_RS12800 PF13180 PDZ domain AL475_RS12805 PF01245 Ribosomal protein L19 AL475_RS12810 PF01746 tRNA (Guanine-1)-methyltransferase AL475_RS12815 PF05239 PRC-barrel domain AL475_RS12815 PF01782 RimM N-terminal domain AL475_RS12820 PF00886 Ribosomal protein S16 AL475_RS12825 PF02978 Signal peptide binding domain AL475_RS12825 PF02881 SRP54-type protein, helical bundle domain AL475_RS12825 PF00448 SRP54-type protein, GTPase domain AL475_RS12830 PF01578 Cytochrome C assembly protein AL475_RS12835 PF01595 Cyclin M transmembrane N-terminal domain AL475_RS12835 PF00571 CBS domain AL475_RS12835 PF03471 Transporter associated domain AL475_RS12840 PF02664 S-Ribosylhomocysteinase (LuxS) AL475_RS12850 PF04262 Glutamate-cysteine ligase AL475_RS12855 PF05193 Peptidase M16 inactive domain AL475_RS12855 PF00675 Insulinase (Peptidase family M16) AL475_RS12860 PF09335 SNARE associated Golgi protein AL475_RS12865 PF00107 Zinc-binding dehydrogenase AL475_RS12865 PF08240 Alcohol dehydrogenase GroES-like domain AL475_RS12870 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit AL475_RS12875 PF02436 Conserved carboxylase domain AL475_RS12875 PF00682 HMGL-like AL475_RS12875 PF00364 Biotin-requiring enzyme AL475_RS12880 PF04277 Oxaloacetate decarboxylase, gamma chain AL475_RS12925 PF02599 Global regulator protein family AL475_RS12930 PF01842 ACT domain AL475_RS12930 PF00696 Amino acid kinase family AL475_RS12930 PF13840 ACT domain AL475_RS12935 PF01411 tRNA synthetases class II (A) AL475_RS12935 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AL475_RS12935 PF02272 DHHA1 domain AL475_RS12940 PF02631 RecX family AL475_RS12945 PF00154 recA bacterial DNA recombination protein AL475_RS12950 PF02464 Competence-damaged protein AL475_RS12955 PF00488 MutS domain V AL475_RS12955 PF01624 MutS domain I AL475_RS12955 PF05188 MutS domain II AL475_RS12955 PF05192 MutS domain III AL475_RS12955 PF05190 MutS family domain IV AL475_RS12960 PF04539 Sigma-70 region 3 AL475_RS12960 PF04542 Sigma-70 region 2 AL475_RS12960 PF00140 Sigma-70 factor, region 1.2 AL475_RS12960 PF04545 Sigma-70, region 4 AL475_RS12965 PF01476 LysM domain AL475_RS12965 PF01551 Peptidase family M23 AL475_RS12975 PF01975 Survival protein SurE AL475_RS12980 PF01142 tRNA pseudouridine synthase D (TruD) AL475_RS12985 PF02542 YgbB family AL475_RS12990 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AL475_RS12995 PF04977 Septum formation initiator AL475_RS13000 PF02673 Bacitracin resistance protein BacA AL475_RS13005 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AL475_RS13010 PF02152 Dihydroneopterin aldolase AL475_RS13015 PF02660 Glycerol-3-phosphate acyltransferase AL475_RS13020 PF00561 alpha/beta hydrolase fold AL475_RS13025 PF00814 Glycoprotease family AL475_RS13030 PF01165 Ribosomal protein S21 AL475_RS13035 PF09424 Yqey-like protein AL475_RS13040 PF01807 CHC2 zinc finger AL475_RS13040 PF08278 DNA primase DnaG DnaB-binding AL475_RS13040 PF08275 DNA primase catalytic core, N-terminal domain AL475_RS13040 PF10410 DnaB-helicase binding domain of primase AL475_RS13045 PF04542 Sigma-70 region 2 AL475_RS13045 PF00140 Sigma-70 factor, region 1.2 AL475_RS13045 PF03979 Sigma-70 factor, region 1.1 AL475_RS13045 PF04546 Sigma-70, non-essential region AL475_RS13045 PF04545 Sigma-70, region 4 AL475_RS13045 PF04539 Sigma-70 region 3 AL475_RS13055 PF00589 Phage integrase family AL475_RS13055 PF13356 Arm DNA-binding domain AL475_RS13075 PF00563 EAL domain AL475_RS13075 PF01590 GAF domain AL475_RS13075 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS13075 PF00360 Phytochrome region AL475_RS13105 PF00196 Bacterial regulatory proteins, luxR family AL475_RS13105 PF17874 MalT-like TPR region AL475_RS13110 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS13120 PF04002 RadC-like JAB domain AL475_RS13165 PF02806 Alpha amylase, C-terminal all-beta domain AL475_RS13165 PF00128 Alpha amylase, catalytic domain AL475_RS13175 PF00924 Mechanosensitive ion channel AL475_RS13175 PF05552 Conserved TM helix AL475_RS13180 PF01699 Sodium/calcium exchanger protein AL475_RS13185 PF02673 Bacitracin resistance protein BacA AL475_RS13215 PF00075 RNase H AL475_RS13270 PF00571 CBS domain AL475_RS13270 PF03448 MgtE intracellular N domain AL475_RS13270 PF01769 Divalent cation transporter AL475_RS13290 PF03480 Bacterial extracellular solute-binding protein, family 7 AL475_RS13295 PF01380 SIS domain AL475_RS13300 PF08220 DeoR-like helix-turn-helix domain AL475_RS13300 PF00455 DeoR C terminal sensor domain AL475_RS13305 PF00224 Pyruvate kinase, barrel domain AL475_RS13305 PF02887 Pyruvate kinase, alpha/beta domain AL475_RS13315 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS13315 PF17158 Membrane-associated sensor, integral membrane domain AL475_RS13325 PF03466 LysR substrate binding domain AL475_RS13325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS13330 PF01810 LysE type translocator AL475_RS13340 PF05552 Conserved TM helix AL475_RS13340 PF00924 Mechanosensitive ion channel AL475_RS13345 PF01116 Fructose-bisphosphate aldolase class-II AL475_RS13350 PF00162 Phosphoglycerate kinase AL475_RS13355 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AL475_RS13355 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AL475_RS13360 PF00593 TonB dependent receptor AL475_RS13360 PF07715 TonB-dependent Receptor Plug Domain AL475_RS13365 PF03466 LysR substrate binding domain AL475_RS13365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS13370 PF00456 Transketolase, thiamine diphosphate binding domain AL475_RS13370 PF02780 Transketolase, C-terminal domain AL475_RS13370 PF02779 Transketolase, pyrimidine binding domain AL475_RS13375 PF02773 S-adenosylmethionine synthetase, C-terminal domain AL475_RS13375 PF02772 S-adenosylmethionine synthetase, central domain AL475_RS13375 PF00438 S-adenosylmethionine synthetase, N-terminal domain AL475_RS13385 PF17283 SprT-like zinc ribbon domain AL475_RS13385 PF10263 SprT-like family AL475_RS13390 PF04231 Endonuclease I AL475_RS13395 PF04452 RNA methyltransferase AL475_RS13400 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AL475_RS13400 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AL475_RS13405 PF02622 Uncharacterized ACR, COG1678 AL475_RS13410 PF03652 Holliday junction resolvase AL475_RS13415 PF00437 Type II/IV secretion system protein AL475_RS13420 PF00437 Type II/IV secretion system protein AL475_RS13425 PF01168 Alanine racemase, N-terminal domain AL475_RS13430 PF03807 NADP oxidoreductase coenzyme F420-dependent AL475_RS13430 PF14748 Pyrroline-5-carboxylate reductase dimerisation AL475_RS13435 PF02325 YGGT family AL475_RS13440 PF02594 Uncharacterised ACR, YggU family COG1872 AL475_RS13450 PF01725 Ham1 family AL475_RS13455 PF04055 Radical SAM superfamily AL475_RS13455 PF06969 HemN C-terminal domain AL475_RS13460 PF00730 HhH-GPD superfamily base excision DNA repair protein AL475_RS13465 PF04960 Glutaminase AL475_RS13470 PF02390 Putative methyltransferase AL475_RS13475 PF14815 NUDIX domain AL475_RS13475 PF10576 Iron-sulfur binding domain of endonuclease III AL475_RS13475 PF00730 HhH-GPD superfamily base excision DNA repair protein AL475_RS13475 PF00633 Helix-hairpin-helix motif AL475_RS13480 PF04362 Bacterial Fe(2+) trafficking AL475_RS13485 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AL475_RS13485 PF01464 Transglycosylase SLT domain AL475_RS13510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL475_RS13510 PF13426 PAS domain AL475_RS13510 PF08447 PAS fold AL475_RS13540 PF00226 DnaJ domain AL475_RS13540 PF05099 Tellurite resistance protein TerB AL475_RS13545 PF03968 OstA-like protein AL475_RS13545 PF04453 LPS transport system D AL475_RS13550 PF09312 SurA N-terminal domain AL475_RS13555 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AL475_RS13560 PF00398 Ribosomal RNA adenine dimethylase AL475_RS13565 PF04379 ApaG domain AL475_RS13570 PF00149 Calcineurin-like phosphoesterase AL475_RS13575 PF00186 Dihydrofolate reductase AL475_RS13580 PF12821 Threonine/Serine exporter, ThrE AL475_RS13585 PF06738 Putative threonine/serine exporter AL475_RS13590 PF01018 GTP1/OBG AL475_RS13590 PF01926 50S ribosome-binding GTPase AL475_RS13595 PF01016 Ribosomal L27 protein AL475_RS13600 PF00829 Ribosomal prokaryotic L21 protein AL475_RS13605 PF00348 Polyprenyl synthetase AL475_RS13610 PF13520 Amino acid permease AL475_RS13615 PF00056 lactate/malate dehydrogenase, NAD binding domain AL475_RS13615 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AL475_RS13620 PF02863 Arginine repressor, C-terminal domain AL475_RS13620 PF01316 Arginine repressor, DNA binding domain AL475_RS13635 PF00582 Universal stress protein family AL475_RS13650 PF06877 Regulator of ribonuclease activity B AL475_RS13655 PF01523 Putative modulator of DNA gyrase AL475_RS13660 PF00795 Carbon-nitrogen hydrolase AL475_RS13665 PF13116 Protein of unknown function AL475_RS13665 PF13502 AsmA-like C-terminal region AL475_RS13670 PF10150 Ribonuclease E/G family AL475_RS13670 PF00575 S1 RNA binding domain AL475_RS13675 PF02545 Maf-like protein AL475_RS13680 PF04093 rod shape-determining protein MreD AL475_RS13685 PF04085 rod shape-determining protein MreC AL475_RS13720 PF00114 Pilin (bacterial filament) AL475_RS13720 PF07963 Prokaryotic N-terminal methylation motif AL475_RS13725 PF07963 Prokaryotic N-terminal methylation motif AL475_RS13735 PF00482 Type II secretion system (T2SS), protein F AL475_RS13740 PF00437 Type II/IV secretion system protein AL475_RS13740 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AL475_RS13750 PF01471 Putative peptidoglycan binding domain AL475_RS13750 PF13401 AAA domain AL475_RS13755 PF00263 Bacterial type II and III secretion system protein AL475_RS13755 PF03958 Bacterial type II/III secretion system short domain AL475_RS13775 PF00563 EAL domain AL475_RS13775 PF17157 Gammaproteobacterial periplasmic sensor domain AL475_RS13775 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS13780 PF00436 Single-strand binding protein family AL475_RS13785 PF00196 Bacterial regulatory proteins, luxR family AL475_RS13790 PF00483 Nucleotidyl transferase AL475_RS13795 PF00005 ABC transporter AL475_RS13795 PF17755 UvrA DNA-binding domain AL475_RS13795 PF17760 UvrA interaction domain AL475_RS13805 PF00266 Aminotransferase class-V AL475_RS13810 PF00696 Amino acid kinase family AL475_RS13810 PF01842 ACT domain AL475_RS13815 PF02965 Vitamin B12 dependent methionine synthase, activation domain AL475_RS13815 PF02310 B12 binding domain AL475_RS13815 PF02574 Homocysteine S-methyltransferase AL475_RS13815 PF00809 Pterin binding enzyme AL475_RS13815 PF02607 B12 binding domain AL475_RS13820 PF00999 Sodium/hydrogen exchanger family AL475_RS13895 PF01507 Phosphoadenosine phosphosulfate reductase family AL475_RS13900 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AL475_RS13900 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AL475_RS13905 PF00667 FAD binding domain AL475_RS13905 PF00258 Flavodoxin AL475_RS13905 PF00175 Oxidoreductase NAD-binding domain AL475_RS13925 PF01207 Dihydrouridine synthase (Dus) AL475_RS13930 PF01475 Ferric uptake regulator family AL475_RS13940 PF00342 Phosphoglucose isomerase AL475_RS13945 PF01894 Uncharacterised protein family UPF0047 AL475_RS13950 PF01168 Alanine racemase, N-terminal domain AL475_RS13950 PF00842 Alanine racemase, C-terminal domain AL475_RS13955 PF00772 DnaB-like helicase N terminal domain AL475_RS13955 PF03796 DnaB-like helicase C terminal domain AL475_RS13965 PF01281 Ribosomal protein L9, N-terminal domain AL475_RS13965 PF03948 Ribosomal protein L9, C-terminal domain AL475_RS13970 PF01084 Ribosomal protein S18 AL475_RS13975 PF00436 Single-strand binding protein family AL475_RS13980 PF01250 Ribosomal protein S6 AL475_RS13985 PF00210 Ferritin-like domain AL475_RS13990 PF04324 BFD-like [2Fe-2S] binding domain AL475_RS13995 PF00009 Elongation factor Tu GTP binding domain AL475_RS13995 PF03144 Elongation factor Tu domain 2 AL475_RS13995 PF03143 Elongation factor Tu C-terminal domain AL475_RS14000 PF00009 Elongation factor Tu GTP binding domain AL475_RS14000 PF03764 Elongation factor G, domain IV AL475_RS14000 PF14492 Elongation Factor G, domain II AL475_RS14000 PF00679 Elongation factor G C-terminus AL475_RS14000 PF03144 Elongation factor Tu domain 2 AL475_RS14005 PF00177 Ribosomal protein S7p/S5e AL475_RS14010 PF00164 Ribosomal protein S12/S23 AL475_RS14015 PF04077 DsrH like protein AL475_RS14020 PF02635 DsrE/DsrF-like family AL475_RS14025 PF02635 DsrE/DsrF-like family AL475_RS14030 PF13309 HTH domain AL475_RS14030 PF08348 YheO-like PAS domain AL475_RS14035 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AL475_RS14035 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AL475_RS14045 PF04102 SlyX AL475_RS14050 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) AL475_RS14055 PF01145 SPFH domain / Band 7 family AL475_RS14060 PF01145 SPFH domain / Band 7 family AL475_RS14060 PF12221 Bacterial membrane protein N terminal AL475_RS14065 PF01926 50S ribosome-binding GTPase AL475_RS14065 PF16360 GTP-binding GTPase Middle Region AL475_RS14065 PF13167 GTP-binding GTPase N-terminal AL475_RS14070 PF17209 Hfq protein AL475_RS14080 PF08676 MutL C terminal dimerisation domain AL475_RS14080 PF01119 DNA mismatch repair protein, C-terminal domain AL475_RS14085 PF01520 N-acetylmuramoyl-L-alanine amidase AL475_RS14090 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AL475_RS14095 PF08331 Domain of unknown function (DUF1730) AL475_RS14140 PF00929 Exonuclease AL475_RS14145 PF03193 RsgA GTPase AL475_RS14150 PF02666 Phosphatidylserine decarboxylase AL475_RS14155 PF02080 TrkA-C domain AL475_RS14155 PF03600 Citrate transporter AL475_RS14160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL475_RS14160 PF00672 HAMP domain AL475_RS14170 PF01676 Metalloenzyme superfamily AL475_RS14170 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AL475_RS14175 PF01551 Peptidase family M23 AL475_RS14185 PF08360 QacR-like protein, C-terminal region AL475_RS14185 PF00440 Bacterial regulatory proteins, tetR family AL475_RS14190 PF01208 Uroporphyrinogen decarboxylase (URO-D) AL475_RS14195 PF00293 NUDIX domain AL475_RS14195 PF09297 NADH pyrophosphatase zinc ribbon domain AL475_RS14200 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ AL475_RS14205 PF04997 RNA polymerase Rpb1, domain 1 AL475_RS14205 PF04998 RNA polymerase Rpb1, domain 5 AL475_RS14205 PF04983 RNA polymerase Rpb1, domain 3 AL475_RS14205 PF05000 RNA polymerase Rpb1, domain 4 AL475_RS14205 PF00623 RNA polymerase Rpb1, domain 2 AL475_RS14210 PF04561 RNA polymerase Rpb2, domain 2 AL475_RS14210 PF04563 RNA polymerase beta subunit AL475_RS14210 PF04565 RNA polymerase Rpb2, domain 3 AL475_RS14210 PF00562 RNA polymerase Rpb2, domain 6 AL475_RS14210 PF10385 RNA polymerase beta subunit external 1 domain AL475_RS14210 PF04560 RNA polymerase Rpb2, domain 7 AL475_RS14215 PF00542 Ribosomal protein L7/L12 C-terminal domain AL475_RS14215 PF16320 Ribosomal protein L7/L12 dimerisation domain AL475_RS14220 PF00466 Ribosomal protein L10 AL475_RS14225 PF00687 Ribosomal protein L1p/L10e family AL475_RS14230 PF03946 Ribosomal protein L11, N-terminal domain AL475_RS14230 PF00298 Ribosomal protein L11, RNA binding domain AL475_RS14235 PF00467 KOW motif AL475_RS14235 PF02357 Transcription termination factor nusG AL475_RS14240 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AL475_RS14250 PF00009 Elongation factor Tu GTP binding domain AL475_RS14250 PF03143 Elongation factor Tu C-terminal domain AL475_RS14250 PF03144 Elongation factor Tu domain 2 AL475_RS14275 PF00485 Phosphoribulokinase / Uridine kinase family AL475_RS14280 PF08279 HTH domain AL475_RS14280 PF03099 Biotin/lipoate A/B protein ligase family AL475_RS14280 PF02237 Biotin protein ligase C terminal domain AL475_RS14285 PF01565 FAD binding domain AL475_RS14285 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AL475_RS14295 PF13091 PLD-like domain AL475_RS14350 PF00175 Oxidoreductase NAD-binding domain AL475_RS14355 PF00175 Oxidoreductase NAD-binding domain AL475_RS14355 PF00111 2Fe-2S iron-sulfur cluster binding domain AL475_RS14355 PF00970 Oxidoreductase FAD-binding domain AL475_RS14360 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AL475_RS14370 PF07498 Rho termination factor, N-terminal domain AL475_RS14370 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AL475_RS14370 PF07497 Rho termination factor, RNA-binding domain AL475_RS14375 PF00085 Thioredoxin AL475_RS14380 PF00270 DEAD/DEAH box helicase AL475_RS14380 PF00271 Helicase conserved C-terminal domain AL475_RS14385 PF02541 Ppx/GppA phosphatase family AL475_RS14390 PF00072 Response regulator receiver domain AL475_RS14390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL475_RS14390 PF01627 Hpt domain AL475_RS14390 PF00512 His Kinase A (phospho-acceptor) domain AL475_RS14390 PF00672 HAMP domain AL475_RS14395 PF12832 MFS_1 like family AL475_RS14410 PF00501 AMP-binding enzyme AL475_RS14410 PF13193 AMP-binding enzyme C-terminal domain AL475_RS14410 PF16177 Acetyl-coenzyme A synthetase N-terminus AL475_RS14415 PF01220 Dehydroquinase class II AL475_RS14420 PF00364 Biotin-requiring enzyme AL475_RS14425 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AL475_RS14425 PF00289 Biotin carboxylase, N-terminal domain AL475_RS14425 PF02785 Biotin carboxylase C-terminal domain AL475_RS14435 PF01207 Dihydrouridine synthase (Dus) AL475_RS14440 PF02954 Bacterial regulatory protein, Fis family AL475_RS14445 PF17200 Single Cache domain 2 AL475_RS14445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL475_RS14445 PF00672 HAMP domain AL475_RS14450 PF13411 MerR HTH family regulatory protein AL475_RS14460 PF01808 AICARFT/IMPCHase bienzyme AL475_RS14460 PF02142 MGS-like domain AL475_RS14465 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AL475_RS14465 PF02843 Phosphoribosylglycinamide synthetase, C domain AL475_RS14465 PF02844 Phosphoribosylglycinamide synthetase, N domain AL475_RS14475 PF00216 Bacterial DNA-binding protein AL475_RS14480 PF00571 CBS domain AL475_RS14480 PF01595 Cyclin M transmembrane N-terminal domain AL475_RS14485 PF00924 Mechanosensitive ion channel AL475_RS14490 PF04222 Protein of unknown function (DUF416) AL475_RS14495 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AL475_RS14500 PF03167 Uracil DNA glycosylase superfamily AL475_RS14505 PF10996 Beta-Casp domain AL475_RS14505 PF00753 Metallo-beta-lactamase superfamily AL475_RS14505 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AL475_RS14510 PF02719 Polysaccharide biosynthesis protein AL475_RS14515 PF02397 Bacterial sugar transferase AL475_RS14520 PF01370 NAD dependent epimerase/dehydratase family AL475_RS14535 PF00535 Glycosyl transferase family 2 AL475_RS14565 PF02350 UDP-N-acetylglucosamine 2-epimerase AL475_RS14575 PF02719 Polysaccharide biosynthesis protein AL475_RS14575 PF08485 Polysaccharide biosynthesis protein C-terminal AL475_RS14580 PF00534 Glycosyl transferases group 1 AL475_RS14610 PF01370 NAD dependent epimerase/dehydratase family AL475_RS14615 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AL475_RS14615 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AL475_RS14615 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AL475_RS14620 PF03279 Bacterial lipid A biosynthesis acyltransferase AL475_RS14625 PF04932 O-Antigen ligase AL475_RS14630 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AL475_RS14635 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AL475_RS14640 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AL475_RS14645 PF00534 Glycosyl transferases group 1 AL475_RS14655 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AL475_RS14660 PF00535 Glycosyl transferase family 2 AL475_RS14665 PF13439 Glycosyltransferase Family 4 AL475_RS14665 PF00534 Glycosyl transferases group 1 AL475_RS14670 PF13439 Glycosyltransferase Family 4 AL475_RS14670 PF00534 Glycosyl transferases group 1 AL475_RS14675 PF01467 Cytidylyltransferase-like AL475_RS14685 PF01370 NAD dependent epimerase/dehydratase family AL475_RS14690 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AL475_RS14690 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AL475_RS14690 PF06827 Zinc finger found in FPG and IleRS AL475_RS14700 PF00471 Ribosomal protein L33 AL475_RS14705 PF00830 Ribosomal L28 family AL475_RS14710 PF04002 RadC-like JAB domain AL475_RS14715 PF17200 Single Cache domain 2 AL475_RS14715 PF00672 HAMP domain AL475_RS14715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL475_RS14720 PF04127 DNA / pantothenate metabolism flavoprotein AL475_RS14720 PF02441 Flavoprotein AL475_RS14725 PF00440 Bacterial regulatory proteins, tetR family AL475_RS14730 PF03279 Bacterial lipid A biosynthesis acyltransferase AL475_RS14735 PF00156 Phosphoribosyl transferase domain AL475_RS14740 PF03725 3' exoribonuclease family, domain 2 AL475_RS14740 PF01138 3' exoribonuclease family, domain 1 AL475_RS14745 PF03755 YicC-like family, N-terminal region AL475_RS14745 PF08340 Domain of unknown function (DUF1732) AL475_RS14750 PF03350 Uncharacterized protein family, UPF0114 AL475_RS14755 PF00593 TonB dependent receptor AL475_RS14755 PF07715 TonB-dependent Receptor Plug Domain AL475_RS14760 PF01032 FecCD transport family AL475_RS14765 PF01497 Periplasmic binding protein AL475_RS14770 PF00005 ABC transporter AL475_RS14775 PF00664 ABC transporter transmembrane region AL475_RS14775 PF00005 ABC transporter AL475_RS14790 PF00271 Helicase conserved C-terminal domain AL475_RS14790 PF09382 RQC domain AL475_RS14790 PF00270 DEAD/DEAH box helicase AL475_RS14790 PF00570 HRDC domain AL475_RS14790 PF16124 RecQ zinc-binding AL475_RS14795 PF00892 EamA-like transporter family AL475_RS14805 PF01810 LysE type translocator AL475_RS14815 PF13361 UvrD-like helicase C-terminal domain AL475_RS14815 PF00580 UvrD/REP helicase N-terminal domain AL475_RS14825 PF05114 Protein of unknown function (DUF692) AL475_RS14845 PF01432 Peptidase family M3 AL475_RS14850 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AL475_RS14855 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL475_RS14855 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AL475_RS14860 PF01047 MarR family AL475_RS14870 PF00529 HlyD membrane-fusion protein of T1SS AL475_RS14870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL475_RS14875 PF00873 AcrB/AcrD/AcrF family AL475_RS14885 PF12911 N-terminal TM domain of oligopeptide transport permease C AL475_RS14885 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS14890 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS14895 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL475_RS14900 PF00005 ABC transporter AL475_RS14900 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL475_RS14930 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AL475_RS14935 PF00580 UvrD/REP helicase N-terminal domain AL475_RS14935 PF13361 UvrD-like helicase C-terminal domain AL475_RS14940 PF16295 Tetracyclin repressor-like, C-terminal domain AL475_RS14940 PF00440 Bacterial regulatory proteins, tetR family AL475_RS14945 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL475_RS14950 PF00873 AcrB/AcrD/AcrF family AL475_RS14955 PF04380 Membrane fusogenic activity AL475_RS14960 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AL475_RS14960 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AL475_RS14965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS14965 PF03466 LysR substrate binding domain AL475_RS15015 PF00132 Bacterial transferase hexapeptide (six repeats) AL475_RS15020 PF07369 Protein of unknown function (DUF1488) AL475_RS15025 PF08501 Shikimate dehydrogenase substrate binding domain AL475_RS15025 PF01488 Shikimate / quinate 5-dehydrogenase AL475_RS15025 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AL475_RS15030 PF01218 Coproporphyrinogen III oxidase AL475_RS15035 PF01300 Telomere recombination AL475_RS15040 PF00731 AIR carboxylase AL475_RS15045 PF02222 ATP-grasp domain AL475_RS15045 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AL475_RS15050 PF01396 Topoisomerase DNA binding C4 zinc finger AL475_RS15055 PF04361 Protein of unknown function (DUF494) AL475_RS15060 PF17782 DprA winged helix domain AL475_RS15060 PF02481 DNA recombination-mediator protein A AL475_RS15065 PF01476 LysM domain AL475_RS15070 PF01327 Polypeptide deformylase AL475_RS15075 PF02911 Formyl transferase, C-terminal domain AL475_RS15075 PF00551 Formyl transferase AL475_RS15080 PF01029 NusB family AL475_RS15080 PF01189 16S rRNA methyltransferase RsmB/F AL475_RS15085 PF02080 TrkA-C domain AL475_RS15085 PF02254 TrkA-N domain AL475_RS15090 PF02386 Cation transport protein AL475_RS15100 PF03006 Haemolysin-III related AL475_RS15105 PF07070 SpoOM protein AL475_RS15115 PF06288 Protein of unknown function (DUF1040) AL475_RS15120 PF13746 4Fe-4S dicluster domain AL475_RS15120 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AL475_RS15120 PF12801 4Fe-4S binding domain AL475_RS15125 PF01636 Phosphotransferase enzyme family AL475_RS15130 PF01323 DSBA-like thioredoxin domain AL475_RS15135 PF01553 Acyltransferase AL475_RS15140 PF01078 Magnesium chelatase, subunit ChlI AL475_RS15140 PF13335 Magnesium chelatase, subunit ChlI C-terminal AL475_RS15145 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AL475_RS15145 PF00205 Thiamine pyrophosphate enzyme, central domain AL475_RS15145 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AL475_RS15155 PF01063 Amino-transferase class IV AL475_RS15160 PF00920 Dehydratase family AL475_RS15165 PF00585 C-terminal regulatory domain of Threonine dehydratase AL475_RS15165 PF00291 Pyridoxal-phosphate dependent enzyme AL475_RS15170 PF00107 Zinc-binding dehydrogenase AL475_RS15170 PF08240 Alcohol dehydrogenase GroES-like domain AL475_RS15175 PF03466 LysR substrate binding domain AL475_RS15175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS15185 PF01206 Sulfurtransferase TusA AL475_RS15195 PF01169 Uncharacterized protein family UPF0016 AL475_RS15200 PF02091 Glycyl-tRNA synthetase alpha subunit AL475_RS15205 PF05746 DALR anticodon binding domain AL475_RS15205 PF02092 Glycyl-tRNA synthetase beta subunit AL475_RS15210 PF00155 Aminotransferase class I and II AL475_RS15215 PF00011 Hsp20/alpha crystallin family AL475_RS15220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL475_RS15220 PF01751 Toprim domain AL475_RS15220 PF00204 DNA gyrase B AL475_RS15220 PF18053 DNA gyrase B subunit insert domain AL475_RS15220 PF00986 DNA gyrase B subunit, carboxyl terminus AL475_RS15225 PF02463 RecF/RecN/SMC N terminal domain AL475_RS15230 PF02768 DNA polymerase III beta subunit, C-terminal domain AL475_RS15230 PF02767 DNA polymerase III beta subunit, central domain AL475_RS15230 PF00712 DNA polymerase III beta subunit, N-terminal domain AL475_RS15235 PF00308 Bacterial dnaA protein AL475_RS15235 PF08299 Bacterial dnaA protein helix-turn-helix AL475_RS15235 PF11638 DnaA N-terminal domain AL475_RS15240 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL475_RS15245 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS15250 PF00005 ABC transporter AL475_RS15255 PF00468 Ribosomal protein L34 AL475_RS15260 PF00825 Ribonuclease P AL475_RS15265 PF01809 Putative membrane protein insertion efficiency factor AL475_RS15270 PF14849 YidC periplasmic domain AL475_RS15270 PF02096 60Kd inner membrane protein AL475_RS15275 PF10396 GTP-binding protein TrmE N-terminus AL475_RS15275 PF12631 MnmE helical domain AL475_RS15275 PF01926 50S ribosome-binding GTPase AL475_RS15280 PF00258 Flavodoxin AL475_RS15285 PF13932 GidA associated domain AL475_RS15285 PF01134 Glucose inhibited division protein A AL475_RS15290 PF02527 rRNA small subunit methyltransferase G AL475_RS15295 PF13614 AAA domain AL475_RS15300 PF17762 HTH domain found in ParB protein AL475_RS15300 PF02195 ParB-like nuclease domain AL475_RS15305 PF03899 ATP synthase I chain AL475_RS15310 PF00119 ATP synthase A chain AL475_RS15315 PF00137 ATP synthase subunit C AL475_RS15320 PF00430 ATP synthase B/B' CF(0) AL475_RS15325 PF00213 ATP synthase delta (OSCP) subunit AL475_RS15330 PF02874 ATP synthase alpha/beta family, beta-barrel domain AL475_RS15330 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AL475_RS15330 PF00306 ATP synthase alpha/beta chain, C terminal domain AL475_RS15335 PF00231 ATP synthase AL475_RS15340 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AL475_RS15340 PF02874 ATP synthase alpha/beta family, beta-barrel domain AL475_RS15345 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AL475_RS15345 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AL475_RS15350 PF00132 Bacterial transferase hexapeptide (six repeats) AL475_RS15350 PF14602 Hexapeptide repeat of succinyl-transferase AL475_RS15350 PF12804 MobA-like NTP transferase domain AL475_RS15355 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS15360 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL475_RS15365 PF07690 Major Facilitator Superfamily AL475_RS15370 PF03466 LysR substrate binding domain AL475_RS15370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS15375 PF00108 Thiolase, N-terminal domain AL475_RS15375 PF02803 Thiolase, C-terminal domain AL475_RS15380 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AL475_RS15380 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AL475_RS15380 PF00378 Enoyl-CoA hydratase/isomerase AL475_RS15385 PF01205 Uncharacterized protein family UPF0029 AL475_RS15385 PF09186 Domain of unknown function (DUF1949) AL475_RS15390 PF02386 Cation transport protein AL475_RS15395 PF12724 Flavodoxin domain AL475_RS15445 PF00394 Multicopper oxidase AL475_RS15445 PF07731 Multicopper oxidase AL475_RS15445 PF07732 Multicopper oxidase AL475_RS15450 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AL475_RS15455 PF01964 Radical SAM ThiC family AL475_RS15455 PF13667 ThiC-associated domain AL475_RS15460 PF02581 Thiamine monophosphate synthase AL475_RS15465 PF00899 ThiF family AL475_RS15475 PF05690 Thiazole biosynthesis protein ThiG AL475_RS15480 PF06968 Biotin and Thiamin Synthesis associated domain AL475_RS15480 PF04055 Radical SAM superfamily AL475_RS15485 PF00571 CBS domain AL475_RS15485 PF00005 ABC transporter AL475_RS15490 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS15495 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AL475_RS15500 PF05199 GMC oxidoreductase AL475_RS15500 PF00732 GMC oxidoreductase AL475_RS15505 PF00171 Aldehyde dehydrogenase family AL475_RS15510 PF00440 Bacterial regulatory proteins, tetR family AL475_RS15510 PF13977 BetI-type transcriptional repressor, C-terminal AL475_RS15515 PF00557 Metallopeptidase family M24 AL475_RS15515 PF01321 Creatinase/Prolidase N-terminal domain AL475_RS15515 PF01321 Creatinase/Prolidase N-terminal domain AL475_RS15515 PF00557 Metallopeptidase family M24 AL475_RS15520 PF03466 LysR substrate binding domain AL475_RS15520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS15525 PF07690 Major Facilitator Superfamily AL475_RS15535 PF01037 Lrp/AsnC ligand binding domain AL475_RS15540 PF08448 PAS fold AL475_RS15540 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS15540 PF00563 EAL domain AL475_RS15545 PF04445 Putative SAM-dependent methyltransferase AL475_RS15555 PF00892 EamA-like transporter family AL475_RS15560 PF00582 Universal stress protein family AL475_RS15565 PF00210 Ferritin-like domain AL475_RS15570 PF10625 Universal stress protein B (UspB) AL475_RS15580 PF02653 Branched-chain amino acid transport system / permease component AL475_RS15585 PF00005 ABC transporter AL475_RS15590 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AL475_RS15595 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AL475_RS15595 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AL475_RS15600 PF00596 Class II Aldolase and Adducin N-terminal domain AL475_RS15605 PF11762 L-arabinose isomerase C-terminal domain AL475_RS15605 PF02610 L-arabinose isomerase AL475_RS15615 PF12833 Helix-turn-helix domain AL475_RS15615 PF02311 AraC-like ligand binding domain AL475_RS15630 PF02646 RmuC family AL475_RS15635 PF01209 ubiE/COQ5 methyltransferase family AL475_RS15640 PF02036 SCP-2 sterol transfer family AL475_RS15645 PF03109 ABC1 family AL475_RS15650 PF02416 mttA/Hcf106 family AL475_RS15655 PF02416 mttA/Hcf106 family AL475_RS15660 PF00902 Sec-independent protein translocase protein (TatC) AL475_RS15665 PF01026 TatD related DNase AL475_RS15670 PF00490 Delta-aminolevulinic acid dehydratase AL475_RS15675 PF00583 Acetyltransferase (GNAT) family AL475_RS15680 PF01367 5'-3' exonuclease, C-terminal SAM fold AL475_RS15680 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AL475_RS15680 PF00476 DNA polymerase family A AL475_RS15680 PF01612 3'-5' exonuclease AL475_RS15685 PF01926 50S ribosome-binding GTPase AL475_RS15690 PF00034 Cytochrome c AL475_RS15705 PF04220 Der GTPase activator (YihI) AL475_RS15710 PF10675 Protein of unknown function (DUF2489) AL475_RS15715 PF04055 Radical SAM superfamily AL475_RS15715 PF06969 HemN C-terminal domain AL475_RS15720 PF07219 HemY protein N-terminus AL475_RS15720 PF07719 Tetratricopeptide repeat AL475_RS15725 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase AL475_RS15730 PF02602 Uroporphyrinogen-III synthase HemD AL475_RS15735 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AL475_RS15735 PF03900 Porphobilinogen deaminase, C-terminal domain AL475_RS15740 PF01295 Adenylate cyclase, class-I AL475_RS15740 PF12633 Adenylate cyclase NT domain AL475_RS15745 PF01491 Frataxin-like domain AL475_RS15755 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AL475_RS15755 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AL475_RS15760 PF01678 Diaminopimelate epimerase AL475_RS15765 PF04340 Protein of unknown function, DUF484 AL475_RS15770 PF02899 Phage integrase, N-terminal SAM-like domain AL475_RS15770 PF00589 Phage integrase family AL475_RS15775 PF13419 Haloacid dehalogenase-like hydrolase AL475_RS15780 PF00563 EAL domain AL475_RS15780 PF08495 FIST N domain AL475_RS15780 PF10442 FIST C domain AL475_RS15780 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS15785 PF03942 DTW domain AL475_RS15805 PF12146 Serine aminopeptidase, S33 AL475_RS15810 PF01810 LysE type translocator AL475_RS15815 PF00563 EAL domain AL475_RS15815 PF08668 HDOD domain AL475_RS15820 PF01022 Bacterial regulatory protein, arsR family AL475_RS15825 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AL475_RS15825 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AL475_RS15840 PF00210 Ferritin-like domain AL475_RS15875 PF01914 MarC family integral membrane protein AL475_RS15890 PF02881 SRP54-type protein, helical bundle domain AL475_RS15890 PF00448 SRP54-type protein, GTPase domain AL475_RS15895 PF00005 ABC transporter AL475_RS15900 PF18075 FtsX extracellular domain AL475_RS15905 PF00140 Sigma-70 factor, region 1.2 AL475_RS15905 PF04542 Sigma-70 region 2 AL475_RS15905 PF04545 Sigma-70, region 4 AL475_RS15910 PF00581 Rhodanese-like domain AL475_RS15915 PF01694 Rhomboid family AL475_RS15915 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease AL475_RS15920 PF03748 Flagellar basal body-associated protein FliL AL475_RS15925 PF04345 Chorismate lyase AL475_RS15930 PF01040 UbiA prenyltransferase family AL475_RS15935 PF01553 Acyltransferase AL475_RS15940 PF01219 Prokaryotic diacylglycerol kinase AL475_RS15945 PF00717 Peptidase S24-like AL475_RS15945 PF01726 LexA DNA binding domain AL475_RS15955 PF01554 MatE AL475_RS15960 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL475_RS15960 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AL475_RS15965 PF00440 Bacterial regulatory proteins, tetR family AL475_RS15975 PF05958 tRNA (Uracil-5-)-methyltransferase AL475_RS15980 PF07715 TonB-dependent Receptor Plug Domain AL475_RS15980 PF00593 TonB dependent receptor AL475_RS15990 PF01177 Asp/Glu/Hydantoin racemase AL475_RS16050 PF00962 Adenosine/AMP deaminase AL475_RS16055 PF03707 Bacterial signalling protein N terminal repeat AL475_RS16055 PF00563 EAL domain AL475_RS16055 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS16055 PF13188 PAS domain AL475_RS16060 PF02954 Bacterial regulatory protein, Fis family AL475_RS16060 PF00072 Response regulator receiver domain AL475_RS16060 PF00158 Sigma-54 interaction domain AL475_RS16065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL475_RS16065 PF00512 His Kinase A (phospho-acceptor) domain AL475_RS16065 PF00989 PAS fold AL475_RS16075 PF00120 Glutamine synthetase, catalytic domain AL475_RS16075 PF03951 Glutamine synthetase, beta-Grasp domain AL475_RS16080 PF00009 Elongation factor Tu GTP binding domain AL475_RS16080 PF03144 Elongation factor Tu domain 2 AL475_RS16080 PF00679 Elongation factor G C-terminus AL475_RS16095 PF03631 Virulence factor BrkB AL475_RS16100 PF02580 D-Tyr-tRNA(Tyr) deacylase AL475_RS16105 PF09500 Putative thioesterase (yiiD_Cterm) AL475_RS16105 PF00583 Acetyltransferase (GNAT) family AL475_RS16110 PF05170 AsmA family AL475_RS16115 PF01293 Phosphoenolpyruvate carboxykinase AL475_RS16125 PF01430 Hsp33 protein AL475_RS16130 PF01479 S4 domain AL475_RS16135 PF11356 Type II secretion system protein C AL475_RS16140 PF03958 Bacterial type II/III secretion system short domain AL475_RS16140 PF00263 Bacterial type II and III secretion system protein AL475_RS16145 PF00437 Type II/IV secretion system protein AL475_RS16150 PF00482 Type II secretion system (T2SS), protein F AL475_RS16155 PF07963 Prokaryotic N-terminal methylation motif AL475_RS16155 PF08334 Type II secretion system (T2SS), protein G AL475_RS16160 PF12019 Type II transport protein GspH AL475_RS16165 PF07963 Prokaryotic N-terminal methylation motif AL475_RS16165 PF02501 Type II secretion system (T2SS), protein I AL475_RS16170 PF11612 Type II secretion system (T2SS), protein J AL475_RS16170 PF07963 Prokaryotic N-terminal methylation motif AL475_RS16175 PF03934 Type II secretion system (T2SS), protein K AL475_RS16180 PF05134 Type II secretion system (T2SS), protein L AL475_RS16180 PF12693 GspL periplasmic domain AL475_RS16185 PF04612 Type II secretion system (T2SS), protein M AL475_RS16190 PF01203 Type II secretion system (T2SS), protein N AL475_RS16195 PF00459 Inositol monophosphatase family AL475_RS16200 PF00293 NUDIX domain AL475_RS16205 PF01521 Iron-sulphur cluster biosynthesis AL475_RS16205 PF01106 NifU-like domain AL475_RS16210 PF00156 Phosphoribosyl transferase domain AL475_RS16215 PF00561 alpha/beta hydrolase fold AL475_RS16225 PF17674 HHH domain AL475_RS16225 PF16921 Tex protein YqgF-like domain AL475_RS16225 PF09371 Tex-like protein N-terminal domain AL475_RS16225 PF00575 S1 RNA binding domain AL475_RS16235 PF03449 Transcription elongation factor, N-terminal AL475_RS16235 PF01272 Transcription elongation factor, GreA/GreB, C-term AL475_RS16240 PF00356 Bacterial regulatory proteins, lacI family AL475_RS16240 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AL475_RS16245 PF00920 Dehydratase family AL475_RS16250 PF01202 Shikimate kinase AL475_RS16255 PF02447 GntP family permease AL475_RS16260 PF01081 KDPG and KHG aldolase AL475_RS16265 PF00072 Response regulator receiver domain AL475_RS16265 PF00486 Transcriptional regulatory protein, C terminal AL475_RS16270 PF00512 His Kinase A (phospho-acceptor) domain AL475_RS16270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL475_RS16270 PF00672 HAMP domain AL475_RS16275 PF00860 Permease family AL475_RS16280 PF00270 DEAD/DEAH box helicase AL475_RS16280 PF17191 RecG wedge domain AL475_RS16280 PF00271 Helicase conserved C-terminal domain AL475_RS16285 PF12105 SpoU, rRNA methylase, C-terminal AL475_RS16285 PF00588 SpoU rRNA Methylase family AL475_RS16290 PF04607 Region found in RelA / SpoT proteins AL475_RS16290 PF02824 TGS domain AL475_RS16290 PF13291 ACT domain AL475_RS16295 PF01192 RNA polymerase Rpb6 AL475_RS16300 PF00625 Guanylate kinase AL475_RS16305 PF02592 Putative vitamin uptake transporter AL475_RS16310 PF00474 Sodium:solute symporter family AL475_RS16320 PF03471 Transporter associated domain AL475_RS16320 PF00999 Sodium/hydrogen exchanger family AL475_RS16320 PF02080 TrkA-C domain AL475_RS16325 PF00196 Bacterial regulatory proteins, luxR family AL475_RS16325 PF00072 Response regulator receiver domain AL475_RS16330 PF11412 Disulphide bond corrector protein DsbC AL475_RS16330 PF02683 Cytochrome C biogenesis protein transmembrane region AL475_RS16335 PF01316 Arginine repressor, DNA binding domain AL475_RS16335 PF02863 Arginine repressor, C-terminal domain AL475_RS16340 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain AL475_RS16340 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain AL475_RS16345 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AL475_RS16345 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AL475_RS16355 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AL475_RS16355 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AL475_RS16360 PF00696 Amino acid kinase family AL475_RS16370 PF03606 C4-dicarboxylate anaerobic carrier AL475_RS16375 PF03605 Anaerobic c4-dicarboxylate membrane transporter AL475_RS16380 PF00206 Lyase AL475_RS16380 PF10415 Fumarase C C-terminus AL475_RS16385 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS16390 PF04186 FxsA cytoplasmic membrane protein AL475_RS16395 PF00588 SpoU rRNA Methylase family AL475_RS16400 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AL475_RS16400 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AL475_RS16405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL475_RS16405 PF00672 HAMP domain AL475_RS16405 PF00512 His Kinase A (phospho-acceptor) domain AL475_RS16405 PF16527 Two-component sensor protein CpxA, periplasmic domain AL475_RS16410 PF00486 Transcriptional regulatory protein, C terminal AL475_RS16410 PF00072 Response regulator receiver domain AL475_RS16415 PF07813 LTXXQ motif family protein AL475_RS16420 PF16916 Dimerisation domain of Zinc Transporter AL475_RS16420 PF01545 Cation efflux family AL475_RS16425 PF00365 Phosphofructokinase AL475_RS16430 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AL475_RS16435 PF06005 Cell division protein ZapB AL475_RS16440 PF02219 Methylenetetrahydrofolate reductase AL475_RS16445 PF00742 Homoserine dehydrogenase AL475_RS16445 PF03447 Homoserine dehydrogenase, NAD binding domain AL475_RS16445 PF00696 Amino acid kinase family AL475_RS16450 PF01053 Cys/Met metabolism PLP-dependent enzyme AL475_RS16455 PF01340 Met Apo-repressor, MetJ AL475_RS16460 PF00390 Malic enzyme, N-terminal domain AL475_RS16460 PF03949 Malic enzyme, NAD binding domain AL475_RS16465 PF01197 Ribosomal protein L31 AL475_RS16470 PF00271 Helicase conserved C-terminal domain AL475_RS16470 PF18074 Primosomal protein N C-terminal domain AL475_RS16470 PF00270 DEAD/DEAH box helicase AL475_RS16470 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AL475_RS16470 PF17764 3′ DNA-binding domain (3′BD) AL475_RS16475 PF00356 Bacterial regulatory proteins, lacI family AL475_RS16485 PF00227 Proteasome subunit AL475_RS16490 PF07724 AAA domain (Cdc48 subfamily) AL475_RS16490 PF10431 C-terminal, D2-small domain, of ClpB protein AL475_RS16490 PF00004 ATPase family associated with various cellular activities (AAA) AL475_RS16495 PF01040 UbiA prenyltransferase family AL475_RS16500 PF03737 Aldolase/RraA AL475_RS16505 PF01554 MatE AL475_RS16510 PF00121 Triosephosphate isomerase AL475_RS16535 PF00166 Chaperonin 10 Kd subunit AL475_RS16540 PF00118 TCP-1/cpn60 chaperonin family AL475_RS16545 PF00005 ABC transporter AL475_RS16555 PF02308 MgtC family AL475_RS16560 PF04055 Radical SAM superfamily AL475_RS16565 PF01132 Elongation factor P (EF-P) OB domain AL475_RS16565 PF08207 Elongation factor P (EF-P) KOW-like domain AL475_RS16565 PF09285 Elongation factor P, C-terminal AL475_RS16570 PF02313 Fumarate reductase subunit D AL475_RS16575 PF02300 Fumarate reductase subunit C AL475_RS16580 PF13183 4Fe-4S dicluster domain AL475_RS16580 PF13085 2Fe-2S iron-sulfur cluster binding domain AL475_RS16585 PF02910 Fumarate reductase flavoprotein C-term AL475_RS16585 PF00890 FAD binding domain AL475_RS16595 PF00152 tRNA synthetases class II (D, K and N) AL475_RS16600 PF00581 Rhodanese-like domain AL475_RS16605 PF02556 Preprotein translocase subunit SecB AL475_RS16610 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AL475_RS16610 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AL475_RS16615 PF06426 Serine acetyltransferase, N-terminal AL475_RS16615 PF00132 Bacterial transferase hexapeptide (six repeats) AL475_RS16620 PF10400 Virulence activator alpha C-term AL475_RS16620 PF03551 Transcriptional regulator PadR-like family AL475_RS16625 PF00311 Phosphoenolpyruvate carboxylase AL475_RS16630 PF01546 Peptidase family M20/M25/M40 AL475_RS16630 PF07687 Peptidase dimerisation domain AL475_RS16635 PF02774 Semialdehyde dehydrogenase, dimerisation domain AL475_RS16635 PF01118 Semialdehyde dehydrogenase, NAD binding domain AL475_RS16640 PF00696 Amino acid kinase family AL475_RS16645 PF00764 Arginosuccinate synthase AL475_RS16650 PF00583 Acetyltransferase (GNAT) family AL475_RS16650 PF14698 Argininosuccinate lyase C-terminal AL475_RS16650 PF00206 Lyase AL475_RS16660 PF00462 Glutaredoxin AL475_RS16660 PF08534 Redoxin AL475_RS16665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS16665 PF03466 LysR substrate binding domain AL475_RS16670 PF00905 Penicillin binding protein transpeptidase domain AL475_RS16670 PF00912 Transglycosylase AL475_RS16670 PF17092 Penicillin-binding protein OB-like domain AL475_RS16690 PF04351 Pilus assembly protein, PilP AL475_RS16695 PF11741 AMIN domain AL475_RS16695 PF03958 Bacterial type II/III secretion system short domain AL475_RS16695 PF00263 Bacterial type II and III secretion system protein AL475_RS16695 PF07660 Secretin and TonB N terminus short domain AL475_RS16700 PF01202 Shikimate kinase AL475_RS16705 PF01761 3-dehydroquinate synthase AL475_RS16715 PF02086 D12 class N6 adenine-specific DNA methyltransferase AL475_RS16720 PF00834 Ribulose-phosphate 3 epimerase family AL475_RS16725 PF13419 Haloacid dehalogenase-like hydrolase AL475_RS16730 PF00579 tRNA synthetases class I (W and Y) AL475_RS16740 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL475_RS16745 PF00117 Glutamine amidotransferase class-I AL475_RS16750 PF00202 Aminotransferase class-III AL475_RS16755 PF04958 Arginine N-succinyltransferase beta subunit AL475_RS16760 PF00171 Aldehyde dehydrogenase family AL475_RS16770 PF00027 Cyclic nucleotide-binding domain AL475_RS16770 PF13545 Crp-like helix-turn-helix domain AL475_RS16775 PF00485 Phosphoribulokinase / Uridine kinase family AL475_RS16780 PF06794 Uncharacterised protein family (UPF0270) AL475_RS16785 PF00561 alpha/beta hydrolase fold AL475_RS16795 PF00005 ABC transporter AL475_RS16795 PF12848 ABC transporter AL475_RS16800 PF02525 Flavodoxin-like fold AL475_RS16805 PF02254 TrkA-N domain AL475_RS16805 PF00999 Sodium/hydrogen exchanger family AL475_RS16810 PF09526 Probable metal-binding protein (DUF2387) AL475_RS16815 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AL475_RS16820 PF01112 Asparaginase AL475_RS16825 PF00709 Adenylosuccinate synthetase AL475_RS16830 PF08238 Sel1 repeat AL475_RS16835 PF11893 Domain of unknown function (DUF3413) AL475_RS16835 PF00884 Sulfatase AL475_RS16840 PF00575 S1 RNA binding domain AL475_RS16840 PF00773 RNB domain AL475_RS16840 PF08461 Ribonuclease R winged-helix domain AL475_RS16840 PF17876 Cold shock domain AL475_RS16840 PF08206 Ribonuclease B OB domain AL475_RS16845 PF08032 RNA 2'-O ribose methyltransferase substrate binding AL475_RS16845 PF00588 SpoU rRNA Methylase family AL475_RS16850 PF00338 Ribosomal protein S10p/S20e AL475_RS16855 PF00297 Ribosomal protein L3 AL475_RS16860 PF00573 Ribosomal protein L4/L1 family AL475_RS16865 PF00276 Ribosomal protein L23 AL475_RS16870 PF03947 Ribosomal Proteins L2, C-terminal domain AL475_RS16870 PF00181 Ribosomal Proteins L2, RNA binding domain AL475_RS16875 PF00203 Ribosomal protein S19 AL475_RS16880 PF00237 Ribosomal protein L22p/L17e AL475_RS16885 PF00189 Ribosomal protein S3, C-terminal domain AL475_RS16885 PF07650 KH domain AL475_RS16890 PF00252 Ribosomal protein L16p/L10e AL475_RS16895 PF00831 Ribosomal L29 protein AL475_RS16900 PF00366 Ribosomal protein S17 AL475_RS16905 PF00238 Ribosomal protein L14p/L23e AL475_RS16910 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AL475_RS16910 PF00467 KOW motif AL475_RS16915 PF00281 Ribosomal protein L5 AL475_RS16915 PF00673 ribosomal L5P family C-terminus AL475_RS16920 PF00253 Ribosomal protein S14p/S29e AL475_RS16925 PF00410 Ribosomal protein S8 AL475_RS16930 PF00347 Ribosomal protein L6 AL475_RS16935 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AL475_RS16940 PF00333 Ribosomal protein S5, N-terminal domain AL475_RS16940 PF03719 Ribosomal protein S5, C-terminal domain AL475_RS16945 PF00327 Ribosomal protein L30p/L7e AL475_RS16950 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AL475_RS16955 PF00344 SecY translocase AL475_RS16960 PF00444 Ribosomal protein L36 AL475_RS16965 PF00416 Ribosomal protein S13/S18 AL475_RS16970 PF00411 Ribosomal protein S11 AL475_RS16975 PF01479 S4 domain AL475_RS16975 PF00163 Ribosomal protein S4/S9 N-terminal domain AL475_RS16980 PF01000 RNA polymerase Rpb3/RpoA insert domain AL475_RS16980 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AL475_RS16980 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AL475_RS16985 PF01196 Ribosomal protein L17 AL475_RS16995 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AL475_RS16995 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AL475_RS17000 PF08525 Opacity-associated protein A N-terminal motif AL475_RS17000 PF04225 Opacity-associated protein A LysM-like domain AL475_RS17005 PF00892 EamA-like transporter family AL475_RS17010 PF13673 Acetyltransferase (GNAT) domain AL475_RS17015 PF00271 Helicase conserved C-terminal domain AL475_RS17015 PF00270 DEAD/DEAH box helicase AL475_RS17015 PF03880 DbpA RNA binding domain AL475_RS17025 PF02872 5'-nucleotidase, C-terminal domain AL475_RS17025 PF00149 Calcineurin-like phosphoesterase AL475_RS17030 PF10414 Sirohaem synthase dimerisation region AL475_RS17030 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AL475_RS17030 PF14824 Sirohaem biosynthesis protein central AL475_RS17035 PF01507 Phosphoadenosine phosphosulfate reductase family AL475_RS17040 PF00009 Elongation factor Tu GTP binding domain AL475_RS17045 PF03600 Citrate transporter AL475_RS17045 PF02080 TrkA-C domain AL475_RS17070 PF02687 FtsX-like permease family AL475_RS17070 PF12704 MacB-like periplasmic core domain AL475_RS17070 PF00005 ABC transporter AL475_RS17080 PF10795 Protein of unknown function (DUF2607) AL475_RS17085 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) AL475_RS17090 PF01625 Peptide methionine sulfoxide reductase AL475_RS17095 PF17243 POTRA domain TamA domain 1 AL475_RS17095 PF07244 Surface antigen variable number repeat AL475_RS17095 PF01103 Surface antigen AL475_RS17100 PF04357 TamB, inner membrane protein subunit of TAM complex AL475_RS17105 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like AL475_RS17110 PF00719 Inorganic pyrophosphatase AL475_RS17115 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AL475_RS17120 PF02875 Mur ligase family, glutamate ligase domain AL475_RS17120 PF08245 Mur ligase middle domain AL475_RS17120 PF01225 Mur ligase family, catalytic domain AL475_RS17125 PF02441 Flavoprotein AL475_RS17135 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS17140 PF00005 ABC transporter AL475_RS17145 PF04751 Protein of unknown function (DUF615) AL475_RS17150 PF01523 Putative modulator of DNA gyrase AL475_RS17155 PF03448 MgtE intracellular N domain AL475_RS17155 PF01769 Divalent cation transporter AL475_RS17155 PF00571 CBS domain AL475_RS17160 PF00381 PTS HPr component phosphorylation site AL475_RS17165 PF03668 P-loop ATPase protein family AL475_RS17170 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AL475_RS17175 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AL475_RS17180 PF04963 Sigma-54 factor, core binding domain AL475_RS17180 PF00309 Sigma-54 factor, Activator interacting domain (AID) AL475_RS17180 PF04552 Sigma-54, DNA binding domain AL475_RS17185 PF12399 Branched-chain amino acid ATP-binding cassette transporter AL475_RS17185 PF00005 ABC transporter AL475_RS17190 PF03968 OstA-like protein AL475_RS17205 PF01380 SIS domain AL475_RS17205 PF00571 CBS domain AL475_RS17210 PF01699 Sodium/calcium exchanger protein AL475_RS17215 PF00005 ABC transporter AL475_RS17220 PF02405 Permease MlaE AL475_RS17225 PF02470 MlaD protein AL475_RS17230 PF05494 MlaC protein AL475_RS17235 PF13466 STAS domain AL475_RS17240 PF01722 BolA-like protein AL475_RS17245 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AL475_RS17250 PF01553 Acyltransferase AL475_RS17255 PF01042 Endoribonuclease L-PSP AL475_RS17260 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain AL475_RS17260 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain AL475_RS17265 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AL475_RS17265 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AL475_RS17270 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AL475_RS17270 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AL475_RS17275 PF13638 PIN domain AL475_RS17275 PF02562 PhoH-like protein AL475_RS17285 PF00271 Helicase conserved C-terminal domain AL475_RS17285 PF18339 RapA N-terminal Tudor like domain 1 AL475_RS17285 PF12137 RNA polymerase recycling family C-terminal AL475_RS17285 PF18337 RapA N-terminal Tudor like domain AL475_RS17285 PF00176 SNF2 family N-terminal domain AL475_RS17295 PF00849 RNA pseudouridylate synthase AL475_RS17300 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AL475_RS17300 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AL475_RS17305 PF10458 Valyl tRNA synthetase tRNA binding arm AL475_RS17305 PF00133 tRNA synthetases class I (I, L, M and V) AL475_RS17305 PF08264 Anticodon-binding domain of tRNA AL475_RS17315 PF00883 Cytosol aminopeptidase family, catalytic domain AL475_RS17315 PF02789 Cytosol aminopeptidase family, N-terminal domain AL475_RS17320 PF03739 Lipopolysaccharide export system permease LptF/LptG AL475_RS17325 PF03739 Lipopolysaccharide export system permease LptF/LptG AL475_RS17340 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS17360 PF00989 PAS fold AL475_RS17360 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS17360 PF01590 GAF domain AL475_RS17360 PF00563 EAL domain AL475_RS17415 PF00694 Aconitase C-terminal domain AL475_RS17420 PF00330 Aconitase family (aconitate hydratase) AL475_RS17425 PF00180 Isocitrate/isopropylmalate dehydrogenase AL475_RS17430 PF00682 HMGL-like AL475_RS17430 PF08502 LeuA allosteric (dimerisation) domain AL475_RS17440 PF01569 PAP2 superfamily AL475_RS17450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS17450 PF03466 LysR substrate binding domain AL475_RS17455 PF00501 AMP-binding enzyme AL475_RS17460 PF00205 Thiamine pyrophosphate enzyme, central domain AL475_RS17460 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AL475_RS17460 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AL475_RS17465 PF10369 Small subunit of acetolactate synthase AL475_RS17470 PF01842 ACT domain AL475_RS17470 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AL475_RS17470 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AL475_RS17475 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AL475_RS17480 PF01812 5-formyltetrahydrofolate cyclo-ligase family AL475_RS17490 PF05164 Cell division protein ZapA AL475_RS17495 PF03695 Uncharacterised protein family (UPF0149) AL475_RS17500 PF01494 FAD binding domain AL475_RS17505 PF01494 FAD binding domain AL475_RS17515 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AL475_RS17515 PF04073 Aminoacyl-tRNA editing domain AL475_RS17515 PF03129 Anticodon binding domain AL475_RS17525 PF03937 Flavinator of succinate dehydrogenase AL475_RS17535 PF02910 Fumarate reductase flavoprotein C-term AL475_RS17535 PF00890 FAD binding domain AL475_RS17540 PF08281 Sigma-70, region 4 AL475_RS17540 PF04542 Sigma-70 region 2 AL475_RS17545 PF03873 Anti sigma-E protein RseA, C-terminal domain AL475_RS17545 PF03872 Anti sigma-E protein RseA, N-terminal domain AL475_RS17550 PF03888 MucB/RseB N-terminal domain AL475_RS17550 PF17188 MucB/RseB C-terminal domain AL475_RS17560 PF00009 Elongation factor Tu GTP binding domain AL475_RS17560 PF03144 Elongation factor Tu domain 2 AL475_RS17560 PF00679 Elongation factor G C-terminus AL475_RS17560 PF06421 GTP-binding protein LepA C-terminus AL475_RS17565 PF10502 Signal peptidase, peptidase S26 AL475_RS17570 PF00035 Double-stranded RNA binding motif AL475_RS17570 PF14622 Ribonuclease-III-like AL475_RS17575 PF07650 KH domain AL475_RS17575 PF01926 50S ribosome-binding GTPase AL475_RS17580 PF02565 Recombination protein O C terminal AL475_RS17580 PF11967 Recombination protein O N terminal AL475_RS17585 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AL475_RS17590 PF01648 4'-phosphopantetheinyl transferase superfamily AL475_RS17595 PF00672 HAMP domain AL475_RS17595 PF00512 His Kinase A (phospho-acceptor) domain AL475_RS17595 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AL475_RS17595 PF00072 Response regulator receiver domain AL475_RS17595 PF01627 Hpt domain AL475_RS17595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL475_RS17600 PF01938 TRAM domain AL475_RS17600 PF05958 tRNA (Uracil-5-)-methyltransferase AL475_RS17605 PF13291 ACT domain AL475_RS17605 PF02824 TGS domain AL475_RS17605 PF04607 Region found in RelA / SpoT proteins AL475_RS17610 PF03819 MazG nucleotide pyrophosphohydrolase domain AL475_RS17615 PF00117 Glutamine amidotransferase class-I AL475_RS17615 PF06418 CTP synthase N-terminus AL475_RS17620 PF00113 Enolase, C-terminal TIM barrel domain AL475_RS17620 PF03952 Enolase, N-terminal domain AL475_RS17625 PF01966 HD domain AL475_RS17625 PF12627 Probable RNA and SrmB- binding site of polymerase A AL475_RS17625 PF01743 Poly A polymerase head domain AL475_RS17630 PF01471 Putative peptidoglycan binding domain AL475_RS17630 PF13401 AAA domain AL475_RS17640 PF08239 Bacterial SH3 domain AL475_RS17645 PF01384 Phosphate transporter family AL475_RS17650 PF01865 Protein of unknown function DUF47 AL475_RS17655 PF01928 CYTH domain AL475_RS17660 PF00027 Cyclic nucleotide-binding domain AL475_RS17660 PF00520 Ion transport protein AL475_RS17665 PF00672 HAMP domain AL475_RS17665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL475_RS17670 PF08335 GlnD PII-uridylyltransferase AL475_RS17670 PF03710 Glutamate-ammonia ligase adenylyltransferase AL475_RS17675 PF00294 pfkB family carbohydrate kinase AL475_RS17675 PF01467 Cytidylyltransferase-like AL475_RS17680 PF02321 Outer membrane efflux protein AL475_RS17685 PF00293 NUDIX domain AL475_RS17690 PF06853 Protein of unknown function (DUF1249) AL475_RS17695 PF00149 Calcineurin-like phosphoesterase AL475_RS17700 PF05728 Uncharacterised protein family (UPF0227) AL475_RS17705 PF00986 DNA gyrase B subunit, carboxyl terminus AL475_RS17705 PF00204 DNA gyrase B AL475_RS17705 PF01751 Toprim domain AL475_RS17705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL475_RS17710 PF00521 DNA gyrase/topoisomerase IV, subunit A AL475_RS17710 PF03989 DNA gyrase C-terminal domain, beta-propeller AL475_RS17715 PF03884 DNA gyrase inhibitor YacG AL475_RS17720 PF07072 Cell division protein AL475_RS17725 PF01121 Dephospho-CoA kinase AL475_RS17730 PF01478 Type IV leader peptidase family AL475_RS17730 PF06750 Bacterial Peptidase A24 N-terminal domain AL475_RS17735 PF00482 Type II secretion system (T2SS), protein F AL475_RS17745 PF00114 Pilin (bacterial filament) AL475_RS17745 PF07963 Prokaryotic N-terminal methylation motif AL475_RS17750 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AL475_RS17750 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AL475_RS17755 PF01510 N-acetylmuramoyl-L-alanine amidase AL475_RS17760 PF00258 Flavodoxin AL475_RS17765 PF02899 Phage integrase, N-terminal SAM-like domain AL475_RS17765 PF00589 Phage integrase family AL475_RS17770 PF10411 Disulfide bond isomerase protein N-terminus AL475_RS17770 PF13098 Thioredoxin-like domain AL475_RS17775 PF01368 DHH family AL475_RS17775 PF17768 RecJ OB domain AL475_RS17775 PF02272 DHHA1 domain AL475_RS17780 PF00392 Bacterial regulatory proteins, gntR family AL475_RS17780 PF07729 FCD domain AL475_RS17785 PF00456 Transketolase, thiamine diphosphate binding domain AL475_RS17785 PF17831 Pyruvate dehydrogenase E1 component middle domain AL475_RS17790 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AL475_RS17790 PF00364 Biotin-requiring enzyme AL475_RS17790 PF02817 e3 binding domain AL475_RS17795 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL475_RS17795 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AL475_RS17800 PF00440 Bacterial regulatory proteins, tetR family AL475_RS17805 PF00156 Phosphoribosyl transferase domain AL475_RS17810 PF00484 Carbonic anhydrase AL475_RS17815 PF00005 ABC transporter AL475_RS17820 PF01061 ABC-2 type transporter AL475_RS17825 PF02569 Pantoate-beta-alanine ligase AL475_RS17830 PF02548 Ketopantoate hydroxymethyltransferase AL475_RS17835 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AL475_RS17840 PF01743 Poly A polymerase head domain AL475_RS17840 PF12627 Probable RNA and SrmB- binding site of polymerase A AL475_RS17840 PF12626 Polymerase A arginine-rich C-terminus AL475_RS17845 PF00749 tRNA synthetases class I (E and Q), catalytic domain AL475_RS17850 PF01258 Prokaryotic dksA/traR C4-type zinc finger AL475_RS17855 PF03749 Sugar fermentation stimulation protein RE domain AL475_RS17855 PF17746 SfsA N-terminal OB domain AL475_RS17860 PF08482 ATP-dependent helicase C-terminal AL475_RS17860 PF00271 Helicase conserved C-terminal domain AL475_RS17860 PF04408 Helicase associated domain (HA2) AL475_RS17860 PF00270 DEAD/DEAH box helicase AL475_RS17865 PF00912 Transglycosylase AL475_RS17865 PF14814 Bifunctional transglycosylase second domain AL475_RS17865 PF00905 Penicillin binding protein transpeptidase domain AL475_RS17870 PF01734 Patatin-like phospholipase AL475_RS17875 PF00330 Aconitase family (aconitate hydratase) AL475_RS17875 PF11791 Aconitate B N-terminal domain AL475_RS17875 PF06434 Aconitate hydratase 2 N-terminus AL475_RS17880 PF06062 Uncharacterised protein family (UPF0231) AL475_RS17885 PF00543 Nitrogen regulatory protein P-II AL475_RS17890 PF00909 Ammonium Transporter Family AL475_RS17895 PF13416 Bacterial extracellular solute-binding protein AL475_RS17905 PF00005 ABC transporter AL475_RS17905 PF08402 TOBE domain AL475_RS17910 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AL475_RS17910 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AL475_RS17910 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AL475_RS17910 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AL475_RS17915 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain AL475_RS17915 PF06165 Glycosyltransferase family 36 AL475_RS17920 PF00728 Glycosyl hydrolase family 20, catalytic domain AL475_RS17920 PF02838 Glycosyl hydrolase family 20, domain 2 AL475_RS17925 PF01869 BadF/BadG/BcrA/BcrD ATPase family AL475_RS17935 PF00005 ABC transporter AL475_RS17935 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL475_RS17940 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL475_RS17940 PF00005 ABC transporter AL475_RS17945 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS17945 PF12911 N-terminal TM domain of oligopeptide transport permease C AL475_RS17950 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS17955 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL475_RS17960 PF09308 LuxQ, periplasmic AL475_RS17960 PF00072 Response regulator receiver domain AL475_RS17960 PF00512 His Kinase A (phospho-acceptor) domain AL475_RS17960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL475_RS17965 PF05175 Methyltransferase small domain AL475_RS17965 PF08468 Methyltransferase small domain N-terminal AL475_RS17970 PF01594 AI-2E family transporter AL475_RS17975 PF00202 Aminotransferase class-III AL475_RS17980 PF01521 Iron-sulphur cluster biosynthesis AL475_RS17990 PF00873 AcrB/AcrD/AcrF family AL475_RS17995 PF01551 Peptidase family M23 AL475_RS17995 PF04225 Opacity-associated protein A LysM-like domain AL475_RS18000 PF01479 S4 domain AL475_RS18000 PF00579 tRNA synthetases class I (W and Y) AL475_RS18010 PF00571 CBS domain AL475_RS18010 PF01769 Divalent cation transporter AL475_RS18010 PF03448 MgtE intracellular N domain AL475_RS18015 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AL475_RS18020 PF13609 Gram-negative porin AL475_RS18025 PF03449 Transcription elongation factor, N-terminal AL475_RS18025 PF01272 Transcription elongation factor, GreA/GreB, C-term AL475_RS18030 PF01985 CRS1 / YhbY (CRM) domain AL475_RS18035 PF01728 FtsJ-like methyltransferase AL475_RS18040 PF01434 Peptidase family M41 AL475_RS18040 PF00004 ATPase family associated with various cellular activities (AAA) AL475_RS18040 PF06480 FtsH Extracellular AL475_RS18040 PF17862 AAA+ lid domain AL475_RS18045 PF00809 Pterin binding enzyme AL475_RS18050 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AL475_RS18050 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AL475_RS18050 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AL475_RS18050 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AL475_RS18055 PF03840 Preprotein translocase SecG subunit AL475_RS18070 PF17384 RimP C-terminal SH3 domain AL475_RS18070 PF02576 RimP N-terminal domain AL475_RS18075 PF00575 S1 RNA binding domain AL475_RS18075 PF08529 NusA N-terminal domain AL475_RS18075 PF13184 NusA-like KH domain AL475_RS18080 PF08364 Bacterial translation initiation factor IF-2 associated region AL475_RS18080 PF04760 Translation initiation factor IF-2, N-terminal region AL475_RS18080 PF00009 Elongation factor Tu GTP binding domain AL475_RS18080 PF11987 Translation-initiation factor 2 AL475_RS18085 PF02033 Ribosome-binding factor A AL475_RS18090 PF16198 tRNA pseudouridylate synthase B C-terminal domain AL475_RS18090 PF01509 TruB family pseudouridylate synthase (N terminal domain) AL475_RS18090 PF09157 Pseudouridine synthase II TruB, C-terminal AL475_RS18095 PF00312 Ribosomal protein S15 AL475_RS18100 PF00013 KH domain AL475_RS18100 PF00575 S1 RNA binding domain AL475_RS18100 PF03725 3' exoribonuclease family, domain 2 AL475_RS18100 PF01138 3' exoribonuclease family, domain 1 AL475_RS18100 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AL475_RS18105 PF13181 Tetratricopeptide repeat AL475_RS18105 PF07719 Tetratricopeptide repeat AL475_RS18115 PF01554 MatE AL475_RS18120 PF01136 Peptidase family U32 AL475_RS18125 PF01136 Peptidase family U32 AL475_RS18130 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS18130 PF00563 EAL domain AL475_RS18130 PF03707 Bacterial signalling protein N terminal repeat AL475_RS18135 PF02036 SCP-2 sterol transfer family AL475_RS18140 PF13508 Acetyltransferase (GNAT) domain AL475_RS18150 PF00583 Acetyltransferase (GNAT) family AL475_RS18155 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS18155 PF03707 Bacterial signalling protein N terminal repeat AL475_RS18155 PF00563 EAL domain AL475_RS18160 PF16658 Class II release factor RF3, C-terminal domain AL475_RS18160 PF03144 Elongation factor Tu domain 2 AL475_RS18160 PF00009 Elongation factor Tu GTP binding domain AL475_RS18165 PF00270 DEAD/DEAH box helicase AL475_RS18165 PF00271 Helicase conserved C-terminal domain AL475_RS18170 PF05175 Methyltransferase small domain AL475_RS18175 PF05525 Branched-chain amino acid transport protein AL475_RS18185 PF01336 OB-fold nucleic acid binding domain AL475_RS18185 PF00152 tRNA synthetases class II (D, K and N) AL475_RS18190 PF00158 Sigma-54 interaction domain AL475_RS18190 PF00072 Response regulator receiver domain AL475_RS18190 PF02954 Bacterial regulatory protein, Fis family AL475_RS18200 PF00248 Aldo/keto reductase family AL475_RS18210 PF02976 DNA mismatch repair enzyme MutH AL475_RS18215 PF00293 NUDIX domain AL475_RS18220 PF01590 GAF domain AL475_RS18220 PF00391 PEP-utilising enzyme, mobile domain AL475_RS18220 PF02896 PEP-utilising enzyme, TIM barrel domain AL475_RS18220 PF05524 PEP-utilising enzyme, N-terminal AL475_RS18225 PF01925 Sulfite exporter TauE/SafE AL475_RS18230 PF01790 Prolipoprotein diacylglyceryl transferase AL475_RS18235 PF00303 Thymidylate synthase AL475_RS18240 PF02690 Na+/Pi-cotransporter AL475_RS18245 PF03466 LysR substrate binding domain AL475_RS18245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS18250 PF01022 Bacterial regulatory protein, arsR family AL475_RS18255 PF01649 Ribosomal protein S20 AL475_RS18260 PF03023 Lipid II flippase MurJ AL475_RS18265 PF01687 Riboflavin kinase AL475_RS18265 PF06574 FAD synthetase AL475_RS18270 PF06827 Zinc finger found in FPG and IleRS AL475_RS18270 PF00133 tRNA synthetases class I (I, L, M and V) AL475_RS18270 PF08264 Anticodon-binding domain of tRNA AL475_RS18275 PF01252 Signal peptidase (SPase) II AL475_RS18280 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AL475_RS18285 PF02401 LytB protein AL475_RS18290 PF02554 Carbon starvation protein CstA AL475_RS18305 PF13580 SIS domain AL475_RS18310 PF03702 Anhydro-N-acetylmuramic acid kinase AL475_RS18315 PF00933 Glycosyl hydrolase family 3 N terminal domain AL475_RS18320 PF04397 LytTr DNA-binding domain AL475_RS18320 PF00072 Response regulator receiver domain AL475_RS18325 PF06580 Histidine kinase AL475_RS18325 PF07694 5TMR of 5TMR-LYT AL475_RS18330 PF00793 DAHP synthetase I family AL475_RS18335 PF02153 Prephenate dehydrogenase AL475_RS18335 PF01817 Chorismate mutase type II AL475_RS18340 PF07238 PilZ domain AL475_RS18345 PF00005 ABC transporter AL475_RS18345 PF12848 ABC transporter AL475_RS18350 PF14718 Soluble lytic murein transglycosylase L domain AL475_RS18350 PF01464 Transglycosylase SLT domain AL475_RS18355 PF01371 Trp repressor protein AL475_RS18360 PF01931 Protein of unknown function DUF84 AL475_RS18365 PF00563 EAL domain AL475_RS18365 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS18370 PF13416 Bacterial extracellular solute-binding protein AL475_RS18375 PF00800 Prephenate dehydratase AL475_RS18375 PF01817 Chorismate mutase type II AL475_RS18380 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AL475_RS18385 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL475_RS18385 PF01464 Transglycosylase SLT domain AL475_RS18390 PF13525 Outer membrane lipoprotein AL475_RS18395 PF00849 RNA pseudouridylate synthase AL475_RS18395 PF01479 S4 domain AL475_RS18400 PF02578 Multi-copper polyphenol oxidoreductase laccase AL475_RS18405 PF07724 AAA domain (Cdc48 subfamily) AL475_RS18405 PF00004 ATPase family associated with various cellular activities (AAA) AL475_RS18405 PF02861 Clp amino terminal domain, pathogenicity island component AL475_RS18405 PF17871 AAA lid domain AL475_RS18405 PF10431 C-terminal, D2-small domain, of ClpB protein AL475_RS18415 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AL475_RS18420 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS18425 PF00005 ABC transporter AL475_RS18435 PF01979 Amidohydrolase family AL475_RS18470 PF01738 Dienelactone hydrolase family AL475_RS18480 PF00881 Nitroreductase family AL475_RS18485 PF07690 Major Facilitator Superfamily AL475_RS18490 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AL475_RS18500 PF05175 Methyltransferase small domain AL475_RS18505 PF01722 BolA-like protein AL475_RS18510 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) AL475_RS18510 PF11973 NQRA C-terminal domain AL475_RS18515 PF03116 NQR2, RnfD, RnfE family AL475_RS18520 PF04205 FMN-binding domain AL475_RS18525 PF02508 Rnf-Nqr subunit, membrane protein AL475_RS18530 PF02508 Rnf-Nqr subunit, membrane protein AL475_RS18535 PF00111 2Fe-2S iron-sulfur cluster binding domain AL475_RS18535 PF00970 Oxidoreductase FAD-binding domain AL475_RS18535 PF00175 Oxidoreductase NAD-binding domain AL475_RS18540 PF02424 ApbE family AL475_RS18555 PF00817 impB/mucB/samB family AL475_RS18555 PF11799 impB/mucB/samB family C-terminal domain AL475_RS18555 PF11798 IMS family HHH motif AL475_RS18570 PF00209 Sodium:neurotransmitter symporter family AL475_RS18580 PF08443 RimK-like ATP-grasp domain AL475_RS18580 PF18030 RimK PreATP-grasp domain AL475_RS18585 PF08443 RimK-like ATP-grasp domain AL475_RS18585 PF18030 RimK PreATP-grasp domain AL475_RS18590 PF07687 Peptidase dimerisation domain AL475_RS18590 PF01546 Peptidase family M20/M25/M40 AL475_RS18595 PF00155 Aminotransferase class I and II AL475_RS18595 PF00392 Bacterial regulatory proteins, gntR family AL475_RS18600 PF00202 Aminotransferase class-III AL475_RS18605 PF00171 Aldehyde dehydrogenase family AL475_RS18610 PF03480 Bacterial extracellular solute-binding protein, family 7 AL475_RS18620 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AL475_RS18625 PF00860 Permease family AL475_RS18630 PF00156 Phosphoribosyl transferase domain AL475_RS18635 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) AL475_RS18640 PF07417 Sigma factor-binding transcriptional regulator Crl AL475_RS18645 PF01472 PUA domain AL475_RS18645 PF00696 Amino acid kinase family AL475_RS18650 PF00171 Aldehyde dehydrogenase family AL475_RS18655 PF03477 ATP cone domain AL475_RS18660 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AL475_RS18660 PF01872 RibD C-terminal domain AL475_RS18665 PF00677 Lumazine binding domain AL475_RS18670 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AL475_RS18670 PF00925 GTP cyclohydrolase II AL475_RS18675 PF00885 6,7-dimethyl-8-ribityllumazine synthase AL475_RS18680 PF01029 NusB family AL475_RS18685 PF02769 AIR synthase related protein, C-terminal domain AL475_RS18685 PF00586 AIR synthase related protein, N-terminal domain AL475_RS18690 PF04608 Phosphatidylglycerophosphatase A AL475_RS18695 PF11944 Protein of unknown function (DUF3461) AL475_RS18700 PF01909 Nucleotidyltransferase domain AL475_RS18700 PF08335 GlnD PII-uridylyltransferase AL475_RS18700 PF01966 HD domain AL475_RS18705 PF00557 Metallopeptidase family M24 AL475_RS18710 PF00318 Ribosomal protein S2 AL475_RS18715 PF00889 Elongation factor TS AL475_RS18720 PF00696 Amino acid kinase family AL475_RS18725 PF01765 Ribosome recycling factor AL475_RS18730 PF01255 Putative undecaprenyl diphosphate synthase AL475_RS18740 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AL475_RS18740 PF13288 DXP reductoisomerase C-terminal domain AL475_RS18740 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AL475_RS18745 PF02163 Peptidase family M50 AL475_RS18745 PF17820 PDZ domain AL475_RS18750 PF01103 Surface antigen AL475_RS18750 PF07244 Surface antigen variable number repeat AL475_RS18755 PF03938 Outer membrane protein (OmpH-like) AL475_RS18760 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AL475_RS18760 PF00132 Bacterial transferase hexapeptide (six repeats) AL475_RS18765 PF07977 FabA-like domain AL475_RS18770 PF00132 Bacterial transferase hexapeptide (six repeats) AL475_RS18770 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AL475_RS18775 PF02684 Lipid-A-disaccharide synthetase AL475_RS18780 PF01351 Ribonuclease HII AL475_RS18785 PF07733 Bacterial DNA polymerase III alpha NTPase domain AL475_RS18785 PF01336 OB-fold nucleic acid binding domain AL475_RS18785 PF02811 PHP domain AL475_RS18785 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AL475_RS18785 PF14579 Helix-hairpin-helix motif AL475_RS18790 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AL475_RS18795 PF11734 TilS substrate C-terminal domain AL475_RS18795 PF01171 PP-loop family AL475_RS18795 PF09179 TilS substrate binding domain AL475_RS18800 PF00034 Cytochrome c AL475_RS18805 PF00543 Nitrogen regulatory protein P-II AL475_RS18810 PF03372 Endonuclease/Exonuclease/phosphatase family AL475_RS18820 PF01464 Transglycosylase SLT domain AL475_RS18820 PF01476 LysM domain AL475_RS18825 PF16123 Hydroxyacylglutathione hydrolase C-terminus AL475_RS18825 PF00753 Metallo-beta-lactamase superfamily AL475_RS18830 PF08241 Methyltransferase domain AL475_RS18835 PF00075 RNase H AL475_RS18840 PF00929 Exonuclease AL475_RS18850 PF09317 Domain of unknown function (DUF1974) AL475_RS18850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL475_RS18850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL475_RS18850 PF02770 Acyl-CoA dehydrogenase, middle domain AL475_RS18855 PF13580 SIS domain AL475_RS18860 PF13230 Glutamine amidotransferases class-II AL475_RS18865 PF00551 Formyl transferase AL475_RS18870 PF02769 AIR synthase related protein, C-terminal domain AL475_RS18870 PF00586 AIR synthase related protein, N-terminal domain AL475_RS18880 PF01479 S4 domain AL475_RS18880 PF00849 RNA pseudouridylate synthase AL475_RS18905 PF03173 Putative carbohydrate binding domain AL475_RS18905 PF02838 Glycosyl hydrolase family 20, domain 2 AL475_RS18905 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain AL475_RS18905 PF00728 Glycosyl hydrolase family 20, catalytic domain AL475_RS18915 PF00403 Heavy-metal-associated domain AL475_RS18920 PF00749 tRNA synthetases class I (E and Q), catalytic domain AL475_RS18925 PF01389 OmpA-like transmembrane domain AL475_RS18925 PF00691 OmpA family AL475_RS18940 PF01219 Prokaryotic diacylglycerol kinase AL475_RS18945 PF00884 Sulfatase AL475_RS18945 PF08019 Phosphoethanolamine transferase EptA/EptB AL475_RS18960 PF02899 Phage integrase, N-terminal SAM-like domain AL475_RS18960 PF00589 Phage integrase family AL475_RS19000 PF05840 Bacteriophage replication gene A protein (GPA) AL475_RS19065 PF04316 Anti-sigma-28 factor, FlgM AL475_RS19075 PF01584 CheW-like domain AL475_RS19075 PF00072 Response regulator receiver domain AL475_RS19080 PF01739 CheR methyltransferase, SAM binding domain AL475_RS19080 PF03705 CheR methyltransferase, all-alpha domain AL475_RS19085 PF00460 Flagella basal body rod protein AL475_RS19090 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL475_RS19090 PF00460 Flagella basal body rod protein AL475_RS19095 PF13860 FlgD Ig-like domain AL475_RS19095 PF13861 FlgD Tudor-like domain AL475_RS19095 PF03963 Flagellar hook capping protein - N-terminal region AL475_RS19100 PF07559 Flagellar basal body protein FlaE AL475_RS19100 PF00460 Flagella basal body rod protein AL475_RS19100 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL475_RS19105 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL475_RS19105 PF00460 Flagella basal body rod protein AL475_RS19110 PF00460 Flagella basal body rod protein AL475_RS19110 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL475_RS19115 PF02107 Flagellar L-ring protein AL475_RS19120 PF02119 Flagellar P-ring protein AL475_RS19125 PF10135 Rod binding protein AL475_RS19125 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AL475_RS19130 PF07196 Flagellin hook IN motif AL475_RS19130 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL475_RS19145 PF00669 Bacterial flagellin N-terminal helical region AL475_RS19145 PF00700 Bacterial flagellin C-terminal helical region AL475_RS19145 PF07196 Flagellin hook IN motif AL475_RS19150 PF00700 Bacterial flagellin C-terminal helical region AL475_RS19150 PF07196 Flagellin hook IN motif AL475_RS19150 PF00669 Bacterial flagellin N-terminal helical region AL475_RS19240 PF06071 Protein of unknown function (DUF933) AL475_RS19240 PF01926 50S ribosome-binding GTPase AL475_RS19245 PF01195 Peptidyl-tRNA hydrolase AL475_RS19250 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AL475_RS19250 PF14572 Phosphoribosyl synthetase-associated domain AL475_RS19255 PF08544 GHMP kinases C terminal AL475_RS19255 PF00288 GHMP kinases N terminal domain AL475_RS19260 PF03550 Outer membrane lipoprotein LolB AL475_RS19265 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AL475_RS19265 PF01488 Shikimate / quinate 5-dehydrogenase AL475_RS19265 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AL475_RS19270 PF00472 RF-1 domain AL475_RS19270 PF03462 PCRF domain AL475_RS19275 PF13847 Methyltransferase domain AL475_RS19275 PF17827 PrmC N-terminal domain AL475_RS19280 PF04247 Invasion gene expression up-regulator, SirB AL475_RS19285 PF13369 Transglutaminase-like superfamily AL475_RS19290 PF00793 DAHP synthetase I family AL475_RS19295 PF02872 5'-nucleotidase, C-terminal domain AL475_RS19295 PF00149 Calcineurin-like phosphoesterase AL475_RS19300 PF04073 Aminoacyl-tRNA editing domain AL475_RS19305 PF00860 Permease family AL475_RS19320 PF03358 NADPH-dependent FMN reductase AL475_RS19325 PF03960 ArsC family AL475_RS19330 PF13181 Tetratricopeptide repeat AL475_RS19330 PF01435 Peptidase family M48 AL475_RS19340 PF01594 AI-2E family transporter AL475_RS19345 PF00672 HAMP domain AL475_RS19345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL475_RS19345 PF02743 Cache domain AL475_RS19350 PF00578 AhpC/TSA family AL475_RS19355 PF01842 ACT domain AL475_RS19360 PF00701 Dihydrodipicolinate synthetase family AL475_RS19365 PF06804 NlpB/DapX lipoprotein AL475_RS19375 PF02557 D-alanyl-D-alanine carboxypeptidase AL475_RS19380 PF01546 Peptidase family M20/M25/M40 AL475_RS19380 PF07687 Peptidase dimerisation domain AL475_RS19385 PF03960 ArsC family AL475_RS19395 PF16363 GDP-mannose 4,6 dehydratase AL475_RS19400 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AL475_RS19400 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AL475_RS19405 PF10509 Galactokinase galactose-binding signature AL475_RS19405 PF00288 GHMP kinases N terminal domain AL475_RS19405 PF08544 GHMP kinases C terminal AL475_RS19410 PF00356 Bacterial regulatory proteins, lacI family AL475_RS19420 PF11143 Protein of unknown function (DUF2919) AL475_RS19425 PF04261 Dyp-type peroxidase family AL475_RS19430 PF00700 Bacterial flagellin C-terminal helical region AL475_RS19430 PF00669 Bacterial flagellin N-terminal helical region AL475_RS19430 PF07196 Flagellin hook IN motif AL475_RS19435 PF00669 Bacterial flagellin N-terminal helical region AL475_RS19435 PF07196 Flagellin hook IN motif AL475_RS19435 PF00700 Bacterial flagellin C-terminal helical region AL475_RS19440 PF00669 Bacterial flagellin N-terminal helical region AL475_RS19440 PF00700 Bacterial flagellin C-terminal helical region AL475_RS19440 PF07196 Flagellin hook IN motif AL475_RS19445 PF03646 FlaG protein AL475_RS19450 PF07195 Flagellar hook-associated protein 2 C-terminus AL475_RS19450 PF07196 Flagellin hook IN motif AL475_RS19450 PF02465 Flagellar hook-associated protein 2 N-terminus AL475_RS19460 PF02561 Flagellar protein FliS AL475_RS19470 PF13188 PAS domain AL475_RS19470 PF00512 His Kinase A (phospho-acceptor) domain AL475_RS19470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL475_RS19475 PF00158 Sigma-54 interaction domain AL475_RS19475 PF00072 Response regulator receiver domain AL475_RS19475 PF02954 Bacterial regulatory protein, Fis family AL475_RS19480 PF02049 Flagellar hook-basal body complex protein FliE AL475_RS19485 PF01514 Secretory protein of YscJ/FliF family AL475_RS19485 PF08345 Flagellar M-ring protein C-terminal AL475_RS19490 PF14842 FliG N-terminal domain AL475_RS19490 PF14841 FliG middle domain AL475_RS19490 PF01706 FliG C-terminal domain AL475_RS19500 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AL475_RS19500 PF18269 T3SS EscN ATPase C-terminal domain AL475_RS19520 PF02154 Flagellar motor switch protein FliM AL475_RS19520 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AL475_RS19525 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AL475_RS19530 PF04347 Flagellar biosynthesis protein, FliO AL475_RS19535 PF00813 FliP family AL475_RS19540 PF01313 Bacterial export proteins, family 3 AL475_RS19545 PF01311 Bacterial export proteins, family 1 AL475_RS19550 PF01312 FlhB HrpN YscU SpaS Family AL475_RS19555 PF01713 Smr domain AL475_RS19560 PF05175 Methyltransferase small domain AL475_RS19565 PF01264 Chorismate synthase AL475_RS19570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS19570 PF03466 LysR substrate binding domain AL475_RS19580 PF03458 UPF0126 domain AL475_RS19585 PF04315 Elongation factor P hydroxylase AL475_RS19590 PF08891 YfcL protein AL475_RS19600 PF01266 FAD dependent oxidoreductase AL475_RS19600 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AL475_RS19605 PF00109 Beta-ketoacyl synthase, N-terminal domain AL475_RS19605 PF02801 Beta-ketoacyl synthase, C-terminal domain AL475_RS19610 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AL475_RS19610 PF11890 Domain of unknown function (DUF3410) AL475_RS19610 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AL475_RS19615 PF01118 Semialdehyde dehydrogenase, NAD binding domain AL475_RS19615 PF02774 Semialdehyde dehydrogenase, dimerisation domain AL475_RS19620 PF01475 Ferric uptake regulator family AL475_RS19630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS19630 PF03466 LysR substrate binding domain AL475_RS19635 PF03788 LrgA family AL475_RS19640 PF04172 LrgB-like family AL475_RS19645 PF00258 Flavodoxin AL475_RS19655 PF12697 Alpha/beta hydrolase family AL475_RS19660 PF17206 SeqA protein N-terminal domain AL475_RS19660 PF03925 SeqA protein C-terminal domain AL475_RS19665 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AL475_RS19665 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AL475_RS19665 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AL475_RS19665 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AL475_RS19675 PF01784 NIF3 (NGG1p interacting factor 3) AL475_RS19680 PF00285 Citrate synthase, C-terminal domain AL475_RS19685 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AL475_RS19690 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AL475_RS19695 PF02910 Fumarate reductase flavoprotein C-term AL475_RS19695 PF00890 FAD binding domain AL475_RS19700 PF13085 2Fe-2S iron-sulfur cluster binding domain AL475_RS19705 PF00676 Dehydrogenase E1 component AL475_RS19705 PF16870 2-oxoglutarate dehydrogenase C-terminal AL475_RS19705 PF16078 2-oxoglutarate dehydrogenase N-terminus AL475_RS19705 PF02779 Transketolase, pyrimidine binding domain AL475_RS19710 PF02817 e3 binding domain AL475_RS19710 PF00364 Biotin-requiring enzyme AL475_RS19710 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AL475_RS19715 PF00549 CoA-ligase AL475_RS19715 PF08442 ATP-grasp domain AL475_RS19720 PF02629 CoA binding domain AL475_RS19720 PF00549 CoA-ligase AL475_RS19725 PF00950 ABC 3 transport family AL475_RS19730 PF00005 ABC transporter AL475_RS19735 PF01297 Zinc-uptake complex component A periplasmic AL475_RS19740 PF12833 Helix-turn-helix domain AL475_RS19750 PF04023 FeoA domain AL475_RS19755 PF02421 Ferrous iron transport protein B AL475_RS19755 PF07664 Ferrous iron transport protein B C terminus AL475_RS19755 PF07670 Nucleoside recognition AL475_RS19770 PF05746 DALR anticodon binding domain AL475_RS19770 PF03485 Arginyl tRNA synthetase N terminal domain AL475_RS19770 PF00750 tRNA synthetases class I (R) AL475_RS19775 PF06185 YecM protein AL475_RS19780 PF05193 Peptidase M16 inactive domain AL475_RS19780 PF00675 Insulinase (Peptidase family M16) AL475_RS19780 PF16187 Middle or third domain of peptidase_M16 AL475_RS19785 PF00300 Histidine phosphatase superfamily (branch 1) AL475_RS19790 PF00771 FHIPEP family AL475_RS19795 PF00448 SRP54-type protein, GTPase domain AL475_RS19800 PF10609 NUBPL iron-transfer P-loop NTPase AL475_RS19805 PF04539 Sigma-70 region 3 AL475_RS19805 PF04542 Sigma-70 region 2 AL475_RS19805 PF04545 Sigma-70, region 4 AL475_RS19810 PF00072 Response regulator receiver domain AL475_RS19815 PF04344 Chemotaxis phosphatase, CheZ AL475_RS19820 PF00072 Response regulator receiver domain AL475_RS19820 PF01627 Hpt domain AL475_RS19820 PF01584 CheW-like domain AL475_RS19820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL475_RS19820 PF02895 Signal transducing histidine kinase, homodimeric domain AL475_RS19825 PF01339 CheB methylesterase AL475_RS19825 PF00072 Response regulator receiver domain AL475_RS19830 PF13614 AAA domain AL475_RS19840 PF01584 CheW-like domain AL475_RS19850 PF00005 ABC transporter AL475_RS19855 PF03379 CcmB protein AL475_RS19860 PF01578 Cytochrome C assembly protein AL475_RS19865 PF04995 Heme exporter protein D (CcmD) AL475_RS19870 PF03100 CcmE AL475_RS19875 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AL475_RS19875 PF01578 Cytochrome C assembly protein AL475_RS19880 PF08534 Redoxin AL475_RS19885 PF03918 Cytochrome C biogenesis protein AL475_RS19890 PF03918 Cytochrome C biogenesis protein AL475_RS19895 PF04333 MlaA lipoprotein AL475_RS19910 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AL475_RS19910 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AL475_RS19915 PF00462 Glutaredoxin AL475_RS19920 PF01751 Toprim domain AL475_RS19920 PF01131 DNA topoisomerase AL475_RS19925 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AL475_RS19925 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit AL475_RS19930 PF01494 FAD binding domain AL475_RS19935 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AL475_RS19950 PF00248 Aldo/keto reductase family AL475_RS19955 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AL475_RS19965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS19965 PF03466 LysR substrate binding domain AL475_RS19970 PF04909 Amidohydrolase AL475_RS19975 PF03737 Aldolase/RraA AL475_RS19980 PF04303 PrpF protein AL475_RS19985 PF04909 Amidohydrolase AL475_RS19995 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AL475_RS20010 PF01970 Tripartite tricarboxylate transporter TctA family AL475_RS20015 PF08501 Shikimate dehydrogenase substrate binding domain AL475_RS20015 PF01488 Shikimate / quinate 5-dehydrogenase AL475_RS20015 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AL475_RS20020 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL475_RS20020 PF01261 Xylose isomerase-like TIM barrel AL475_RS20030 PF00850 Histone deacetylase domain AL475_RS20040 PF00155 Aminotransferase class I and II AL475_RS20055 PF11893 Domain of unknown function (DUF3413) AL475_RS20055 PF00884 Sulfatase AL475_RS20060 PF07208 Protein of unknown function (DUF1414) AL475_RS20065 PF04245 37-kD nucleoid-associated bacterial protein AL475_RS20075 PF03553 Na+/H+ antiporter family AL475_RS20080 PF02774 Semialdehyde dehydrogenase, dimerisation domain AL475_RS20080 PF01118 Semialdehyde dehydrogenase, NAD binding domain AL475_RS20085 PF00520 Ion transport protein AL475_RS20085 PF00027 Cyclic nucleotide-binding domain AL475_RS20090 PF01914 MarC family integral membrane protein AL475_RS20095 PF00465 Iron-containing alcohol dehydrogenase AL475_RS20095 PF00171 Aldehyde dehydrogenase family AL475_RS20105 PF00916 Sulfate permease family AL475_RS20105 PF01740 STAS domain AL475_RS20115 PF12111 Polyribonucleotide phosphorylase C terminal AL475_RS20115 PF10150 Ribonuclease E/G family AL475_RS20115 PF00575 S1 RNA binding domain AL475_RS20120 PF01479 S4 domain AL475_RS20120 PF00849 RNA pseudouridylate synthase AL475_RS20125 PF02545 Maf-like protein AL475_RS20130 PF02620 Large ribosomal RNA subunit accumulation protein YceD AL475_RS20135 PF01783 Ribosomal L32p protein family AL475_RS20140 PF02504 Fatty acid synthesis protein AL475_RS20145 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AL475_RS20145 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AL475_RS20150 PF00698 Acyl transferase domain AL475_RS20160 PF00550 Phosphopantetheine attachment site AL475_RS20165 PF02801 Beta-ketoacyl synthase, C-terminal domain AL475_RS20165 PF00109 Beta-ketoacyl synthase, N-terminal domain AL475_RS20170 PF01063 Amino-transferase class IV AL475_RS20175 PF02618 YceG-like family AL475_RS20180 PF02223 Thymidylate kinase AL475_RS20185 PF09115 DNA polymerase III, delta subunit, C terminal AL475_RS20190 PF01026 TatD related DNase AL475_RS20195 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AL475_RS20195 PF00367 phosphotransferase system, EIIB AL475_RS20195 PF02378 Phosphotransferase system, EIIC AL475_RS20205 PF02378 Phosphotransferase system, EIIC AL475_RS20205 PF00367 phosphotransferase system, EIIB AL475_RS20220 PF00209 Sodium:neurotransmitter symporter family AL475_RS20235 PF01734 Patatin-like phospholipase AL475_RS20240 PF00224 Pyruvate kinase, barrel domain AL475_RS20240 PF02887 Pyruvate kinase, alpha/beta domain AL475_RS20245 PF00480 ROK family AL475_RS20250 PF00072 Response regulator receiver domain AL475_RS20250 PF01584 CheW-like domain AL475_RS20255 PF07733 Bacterial DNA polymerase III alpha NTPase domain AL475_RS20255 PF01336 OB-fold nucleic acid binding domain AL475_RS20255 PF14579 Helix-hairpin-helix motif AL475_RS20255 PF02811 PHP domain AL475_RS20255 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AL475_RS20270 PF00106 short chain dehydrogenase AL475_RS20275 PF01343 Peptidase family S49 AL475_RS20275 PF08496 Peptidase family S49 N-terminal AL475_RS20285 PF02540 NAD synthase AL475_RS20285 PF00795 Carbon-nitrogen hydrolase AL475_RS20305 PF01966 HD domain AL475_RS20305 PF13286 Phosphohydrolase-associated domain AL475_RS20315 PF00155 Aminotransferase class I and II AL475_RS20320 PF00425 chorismate binding enzyme AL475_RS20325 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AL475_RS20325 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AL475_RS20325 PF16582 Middle domain of thiamine pyrophosphate AL475_RS20330 PF12697 Alpha/beta hydrolase family AL475_RS20335 PF00378 Enoyl-CoA hydratase/isomerase AL475_RS20340 PF13378 Enolase C-terminal domain-like AL475_RS20345 PF00501 AMP-binding enzyme AL475_RS20345 PF13193 AMP-binding enzyme C-terminal domain AL475_RS20355 PF03601 Conserved hypothetical protein 698 AL475_RS20360 PF07690 Major Facilitator Superfamily AL475_RS20380 PF06445 GyrI-like small molecule binding domain AL475_RS20385 PF01476 LysM domain AL475_RS20385 PF01464 Transglycosylase SLT domain AL475_RS20405 PF00460 Flagella basal body rod protein AL475_RS20410 PF00460 Flagella basal body rod protein AL475_RS20410 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL475_RS20415 PF03963 Flagellar hook capping protein - N-terminal region AL475_RS20415 PF13860 FlgD Ig-like domain AL475_RS20415 PF13861 FlgD Tudor-like domain AL475_RS20420 PF07559 Flagellar basal body protein FlaE AL475_RS20420 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL475_RS20420 PF00460 Flagella basal body rod protein AL475_RS20425 PF00460 Flagella basal body rod protein AL475_RS20425 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL475_RS20430 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL475_RS20430 PF00460 Flagella basal body rod protein AL475_RS20435 PF02107 Flagellar L-ring protein AL475_RS20440 PF02119 Flagellar P-ring protein AL475_RS20445 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AL475_RS20445 PF10135 Rod binding protein AL475_RS20450 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL475_RS20450 PF00460 Flagella basal body rod protein AL475_RS20500 PF01370 NAD dependent epimerase/dehydratase family AL475_RS20505 PF04170 NlpE N-terminal domain AL475_RS20515 PF00691 OmpA family AL475_RS20515 PF13677 Membrane MotB of proton-channel complex MotA/MotB AL475_RS20520 PF01618 MotA/TolQ/ExbB proton channel family AL475_RS20525 PF04545 Sigma-70, region 4 AL475_RS20525 PF04542 Sigma-70 region 2 AL475_RS20530 PF03748 Flagellar basal body-associated protein FliL AL475_RS20550 PF02465 Flagellar hook-associated protein 2 N-terminus AL475_RS20550 PF07195 Flagellar hook-associated protein 2 C-terminus AL475_RS20550 PF07196 Flagellin hook IN motif AL475_RS20555 PF00700 Bacterial flagellin C-terminal helical region AL475_RS20555 PF00669 Bacterial flagellin N-terminal helical region AL475_RS20565 PF00771 FHIPEP family AL475_RS20570 PF01312 FlhB HrpN YscU SpaS Family AL475_RS20575 PF01311 Bacterial export proteins, family 1 AL475_RS20580 PF01313 Bacterial export proteins, family 3 AL475_RS20585 PF00813 FliP family AL475_RS20590 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AL475_RS20600 PF00691 OmpA family AL475_RS20605 PF00158 Sigma-54 interaction domain AL475_RS20605 PF00072 Response regulator receiver domain AL475_RS20605 PF02954 Bacterial regulatory protein, Fis family AL475_RS20610 PF02049 Flagellar hook-basal body complex protein FliE AL475_RS20615 PF08345 Flagellar M-ring protein C-terminal AL475_RS20615 PF01514 Secretory protein of YscJ/FliF family AL475_RS20620 PF01706 FliG C-terminal domain AL475_RS20620 PF14841 FliG middle domain AL475_RS20620 PF14842 FliG N-terminal domain AL475_RS20630 PF18269 T3SS EscN ATPase C-terminal domain AL475_RS20630 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AL475_RS20640 PF00291 Pyridoxal-phosphate dependent enzyme AL475_RS20645 PF01037 Lrp/AsnC ligand binding domain AL475_RS20645 PF13404 AsnC-type helix-turn-helix domain AL475_RS20655 PF09619 Type III secretion system lipoprotein chaperone (YscW) AL475_RS20660 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AL475_RS20670 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS20670 PF13185 GAF domain AL475_RS20695 PF03358 NADPH-dependent FMN reductase AL475_RS20700 PF00892 EamA-like transporter family AL475_RS20710 PF00313 'Cold-shock' DNA-binding domain AL475_RS20735 PF00440 Bacterial regulatory proteins, tetR family AL475_RS20745 PF00694 Aconitase C-terminal domain AL475_RS20745 PF00330 Aconitase family (aconitate hydratase) AL475_RS20750 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AL475_RS20750 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AL475_RS20755 PF01161 Phosphatidylethanolamine-binding protein AL475_RS20760 PF12833 Helix-turn-helix domain AL475_RS20780 PF09334 tRNA synthetases class I (M) AL475_RS20780 PF01588 Putative tRNA binding domain AL475_RS20790 PF00873 AcrB/AcrD/AcrF family AL475_RS20795 PF11604 Copper binding periplasmic protein CusF AL475_RS20810 PF08521 Two-component sensor kinase N-terminal AL475_RS20810 PF00512 His Kinase A (phospho-acceptor) domain AL475_RS20810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL475_RS20815 PF00486 Transcriptional regulatory protein, C terminal AL475_RS20815 PF00072 Response regulator receiver domain AL475_RS20820 PF01569 PAP2 superfamily AL475_RS20830 PF00271 Helicase conserved C-terminal domain AL475_RS20830 PF00270 DEAD/DEAH box helicase AL475_RS20835 PF00884 Sulfatase AL475_RS20840 PF01219 Prokaryotic diacylglycerol kinase AL475_RS20845 PF00884 Sulfatase AL475_RS20845 PF08019 Phosphoethanolamine transferase EptA/EptB AL475_RS20870 PF00072 Response regulator receiver domain AL475_RS20870 PF00196 Bacterial regulatory proteins, luxR family AL475_RS20875 PF00512 His Kinase A (phospho-acceptor) domain AL475_RS20875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL475_RS20880 PF13247 4Fe-4S dicluster domain AL475_RS20885 PF03916 Polysulphide reductase, NrfD AL475_RS20890 PF01568 Molydopterin dinucleotide binding domain AL475_RS20890 PF00384 Molybdopterin oxidoreductase AL475_RS20890 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AL475_RS20895 PF00034 Cytochrome c AL475_RS20900 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AL475_RS20910 PF03707 Bacterial signalling protein N terminal repeat AL475_RS20910 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS20910 PF00563 EAL domain AL475_RS20915 PF00392 Bacterial regulatory proteins, gntR family AL475_RS20915 PF00155 Aminotransferase class I and II AL475_RS20920 PF01654 Cytochrome bd terminal oxidase subunit I AL475_RS20925 PF02322 Cytochrome bd terminal oxidase subunit II AL475_RS20960 PF00999 Sodium/hydrogen exchanger family AL475_RS20960 PF02254 TrkA-N domain AL475_RS20965 PF02525 Flavodoxin-like fold AL475_RS20970 PF07690 Major Facilitator Superfamily AL475_RS20975 PF00857 Isochorismatase family AL475_RS20975 PF00550 Phosphopantetheine attachment site AL475_RS20980 PF13193 AMP-binding enzyme C-terminal domain AL475_RS20980 PF00501 AMP-binding enzyme AL475_RS20985 PF00425 chorismate binding enzyme AL475_RS20995 PF00793 DAHP synthetase I family AL475_RS21000 PF00501 AMP-binding enzyme AL475_RS21000 PF08242 Methyltransferase domain AL475_RS21000 PF00668 Condensation domain AL475_RS21000 PF00550 Phosphopantetheine attachment site AL475_RS21005 PF00501 AMP-binding enzyme AL475_RS21005 PF13193 AMP-binding enzyme C-terminal domain AL475_RS21005 PF00668 Condensation domain AL475_RS21005 PF00550 Phosphopantetheine attachment site AL475_RS21010 PF00296 Luciferase-like monooxygenase AL475_RS21015 PF01497 Periplasmic binding protein AL475_RS21020 PF01032 FecCD transport family AL475_RS21025 PF01032 FecCD transport family AL475_RS21030 PF07715 TonB-dependent Receptor Plug Domain AL475_RS21040 PF00550 Phosphopantetheine attachment site AL475_RS21040 PF00501 AMP-binding enzyme AL475_RS21040 PF00668 Condensation domain AL475_RS21040 PF00975 Thioesterase domain AL475_RS21040 PF13193 AMP-binding enzyme C-terminal domain AL475_RS21045 PF00005 ABC transporter AL475_RS21055 PF00356 Bacterial regulatory proteins, lacI family AL475_RS21060 PF00232 Glycosyl hydrolase family 1 AL475_RS21065 PF02678 Pirin AL475_RS21065 PF17954 Quercetinase C-terminal cupin domain AL475_RS21070 PF02581 Thiamine monophosphate synthase AL475_RS21075 PF02110 Hydroxyethylthiazole kinase family AL475_RS21080 PF08543 Phosphomethylpyrimidine kinase AL475_RS21085 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL475_RS21085 PF00005 ABC transporter AL475_RS21090 PF12911 N-terminal TM domain of oligopeptide transport permease C AL475_RS21090 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS21095 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS21100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL475_RS21110 PF02321 Outer membrane efflux protein AL475_RS21115 PF00529 HlyD membrane-fusion protein of T1SS AL475_RS21115 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL475_RS21120 PF07690 Major Facilitator Superfamily AL475_RS21125 PF12833 Helix-turn-helix domain AL475_RS21125 PF06445 GyrI-like small molecule binding domain AL475_RS21130 PF07715 TonB-dependent Receptor Plug Domain AL475_RS21130 PF00593 TonB dependent receptor AL475_RS21135 PF00486 Transcriptional regulatory protein, C terminal AL475_RS21135 PF00072 Response regulator receiver domain AL475_RS21140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL475_RS21140 PF00512 His Kinase A (phospho-acceptor) domain AL475_RS21145 PF00367 phosphotransferase system, EIIB AL475_RS21145 PF02378 Phosphotransferase system, EIIC AL475_RS21150 PF00356 Bacterial regulatory proteins, lacI family AL475_RS21155 PF00251 Glycosyl hydrolases family 32 N-terminal domain AL475_RS21155 PF08244 Glycosyl hydrolases family 32 C terminal AL475_RS21160 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS21160 PF13426 PAS domain AL475_RS21160 PF00563 EAL domain AL475_RS21165 PF02264 LamB porin AL475_RS21165 PF11471 Maltoporin periplasmic N-terminal extension AL475_RS21170 PF00294 pfkB family carbohydrate kinase AL475_RS21180 PF00109 Beta-ketoacyl synthase, N-terminal domain AL475_RS21180 PF02801 Beta-ketoacyl synthase, C-terminal domain AL475_RS21195 PF00109 Beta-ketoacyl synthase, N-terminal domain AL475_RS21195 PF02801 Beta-ketoacyl synthase, C-terminal domain AL475_RS21220 PF00221 Aromatic amino acid lyase AL475_RS21225 PF00535 Glycosyl transferase family 2 AL475_RS21235 PF00501 AMP-binding enzyme AL475_RS21235 PF13193 AMP-binding enzyme C-terminal domain AL475_RS21245 PF00550 Phosphopantetheine attachment site AL475_RS21250 PF00550 Phosphopantetheine attachment site AL475_RS21275 PF04820 Tryptophan halogenase AL475_RS21280 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL475_RS21285 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS21290 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS21290 PF12911 N-terminal TM domain of oligopeptide transport permease C AL475_RS21295 PF00005 ABC transporter AL475_RS21295 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL475_RS21300 PF00005 ABC transporter AL475_RS21300 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL475_RS21310 PF13409 Glutathione S-transferase, N-terminal domain AL475_RS21315 PF13194 Domain of unknown function (DUF4010) AL475_RS21320 PF01515 Phosphate acetyl/butaryl transferase AL475_RS21320 PF07085 DRTGG domain AL475_RS21325 PF00871 Acetokinase family AL475_RS21330 PF04217 Protein of unknown function, DUF412 AL475_RS21340 PF02653 Branched-chain amino acid transport system / permease component AL475_RS21345 PF00005 ABC transporter AL475_RS21350 PF05230 MASE2 domain AL475_RS21350 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS21355 PF01207 Dihydrouridine synthase (Dus) AL475_RS21360 PF07963 Prokaryotic N-terminal methylation motif AL475_RS21365 PF07516 SecA Wing and Scaffold domain AL475_RS21365 PF01043 SecA preprotein cross-linking domain AL475_RS21365 PF07517 SecA DEAD-like domain AL475_RS21365 PF02810 SEC-C motif AL475_RS21370 PF03548 Outer membrane lipoprotein carrier protein LolA AL475_RS21375 PF12002 MgsA AAA+ ATPase C terminal AL475_RS21375 PF00004 ATPase family associated with various cellular activities (AAA) AL475_RS21375 PF16193 AAA C-terminal domain AL475_RS21380 PF02403 Seryl-tRNA synthetase N-terminal domain AL475_RS21380 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AL475_RS21390 PF01568 Molydopterin dinucleotide binding domain AL475_RS21390 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AL475_RS21390 PF00384 Molybdopterin oxidoreductase AL475_RS21390 PF04324 BFD-like [2Fe-2S] binding domain AL475_RS21395 PF10414 Sirohaem synthase dimerisation region AL475_RS21395 PF14824 Sirohaem biosynthesis protein central AL475_RS21395 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AL475_RS21400 PF02885 Glycosyl transferase family, helical bundle domain AL475_RS21400 PF00591 Glycosyl transferase family, a/b domain AL475_RS21405 PF03861 ANTAR domain AL475_RS21405 PF00072 Response regulator receiver domain AL475_RS21410 PF00005 ABC transporter AL475_RS21415 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS21420 PF00005 ABC transporter AL475_RS21425 PF13806 Rieske-like [2Fe-2S] domain AL475_RS21425 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL475_RS21425 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AL475_RS21425 PF18267 Rubredoxin NAD+ reductase C-terminal domain AL475_RS21425 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AL475_RS21425 PF04324 BFD-like [2Fe-2S] binding domain AL475_RS21435 PF00202 Aminotransferase class-III AL475_RS21440 PF04055 Radical SAM superfamily AL475_RS21440 PF06968 Biotin and Thiamin Synthesis associated domain AL475_RS21445 PF00155 Aminotransferase class I and II AL475_RS21450 PF08241 Methyltransferase domain AL475_RS21460 PF01435 Peptidase family M48 AL475_RS21505 PF00206 Lyase AL475_RS21505 PF08328 Adenylosuccinate lyase C-terminal AL475_RS21510 PF04356 Protein of unknown function (DUF489) AL475_RS21520 PF00294 pfkB family carbohydrate kinase AL475_RS21525 PF00816 H-NS histone family AL475_RS21530 PF03553 Na+/H+ antiporter family AL475_RS21535 PF00158 Sigma-54 interaction domain AL475_RS21535 PF00072 Response regulator receiver domain AL475_RS21535 PF02954 Bacterial regulatory protein, Fis family AL475_RS21540 PF01634 ATP phosphoribosyltransferase AL475_RS21540 PF08029 HisG, C-terminal domain AL475_RS21545 PF00815 Histidinol dehydrogenase AL475_RS21550 PF00155 Aminotransferase class I and II AL475_RS21555 PF08645 Polynucleotide kinase 3 phosphatase AL475_RS21555 PF00475 Imidazoleglycerol-phosphate dehydratase AL475_RS21560 PF00117 Glutamine amidotransferase class-I AL475_RS21565 PF00977 Histidine biosynthesis protein AL475_RS21570 PF00977 Histidine biosynthesis protein AL475_RS21575 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AL475_RS21575 PF01502 Phosphoribosyl-AMP cyclohydrolase AL475_RS21580 PF00849 RNA pseudouridylate synthase AL475_RS21585 PF03971 Monomeric isocitrate dehydrogenase AL475_RS21590 PF00313 'Cold-shock' DNA-binding domain AL475_RS21595 PF02617 ATP-dependent Clp protease adaptor protein ClpS AL475_RS21600 PF00004 ATPase family associated with various cellular activities (AAA) AL475_RS21600 PF17871 AAA lid domain AL475_RS21600 PF07724 AAA domain (Cdc48 subfamily) AL475_RS21600 PF02861 Clp amino terminal domain, pathogenicity island component AL475_RS21600 PF10431 C-terminal, D2-small domain, of ClpB protein AL475_RS21605 PF01176 Translation initiation factor 1A / IF-1 AL475_RS21610 PF04377 Arginine-tRNA-protein transferase, C terminus AL475_RS21610 PF04376 Arginine-tRNA-protein transferase, N terminus AL475_RS21615 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AL475_RS21625 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AL475_RS21630 PF10692 Protein of unknown function (DUF2498) AL475_RS21635 PF08272 Topoisomerase I zinc-ribbon-like AL475_RS21635 PF01131 DNA topoisomerase AL475_RS21635 PF01751 Toprim domain AL475_RS21635 PF01396 Topoisomerase DNA binding C4 zinc finger AL475_RS21640 PF00072 Response regulator receiver domain AL475_RS21640 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS21645 PF00483 Nucleotidyl transferase AL475_RS21650 PF08323 Starch synthase catalytic domain AL475_RS21650 PF00534 Glycosyl transferases group 1 AL475_RS21670 PF04993 TfoX N-terminal domain AL475_RS21670 PF04994 TfoX C-terminal domain AL475_RS21675 PF00356 Bacterial regulatory proteins, lacI family AL475_RS21680 PF02613 Nitrate reductase delta subunit AL475_RS21685 PF00486 Transcriptional regulatory protein, C terminal AL475_RS21685 PF00072 Response regulator receiver domain AL475_RS21690 PF02698 DUF218 domain AL475_RS21700 PF03882 MukF winged-helix domain AL475_RS21700 PF17192 MukF middle domain AL475_RS21700 PF17193 MukF C-terminal domain AL475_RS21705 PF04288 MukE-like family AL475_RS21710 PF16330 MukB hinge domain AL475_RS21710 PF04310 MukB N-terminal AL475_RS21715 PF08443 RimK-like ATP-grasp domain AL475_RS21715 PF18030 RimK PreATP-grasp domain AL475_RS21725 PF08443 RimK-like ATP-grasp domain AL475_RS21725 PF18030 RimK PreATP-grasp domain AL475_RS21730 PF08003 Protein of unknown function (DUF1698) AL475_RS21735 PF13649 Methyltransferase domain AL475_RS21745 PF00152 tRNA synthetases class II (D, K and N) AL475_RS21745 PF02938 GAD domain AL475_RS21745 PF01336 OB-fold nucleic acid binding domain AL475_RS21750 PF00265 Thymidine kinase AL475_RS21755 PF02698 DUF218 domain AL475_RS21760 PF01370 NAD dependent epimerase/dehydratase family AL475_RS21765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS21765 PF03466 LysR substrate binding domain AL475_RS21780 PF01226 Formate/nitrite transporter AL475_RS21785 PF03649 Uncharacterised protein family (UPF0014) AL475_RS21790 PF06796 Periplasmic nitrate reductase protein NapE AL475_RS21795 PF03264 NapC/NirT cytochrome c family, N-terminal region AL475_RS21800 PF00384 Molybdopterin oxidoreductase AL475_RS21800 PF18364 Molybdopterin oxidoreductase N-terminal domain AL475_RS21800 PF01568 Molydopterin dinucleotide binding domain AL475_RS21820 PF01368 DHH family AL475_RS21820 PF02833 DHHA2 domain AL475_RS21835 PF00005 ABC transporter AL475_RS21840 PF00005 ABC transporter AL475_RS21840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL475_RS21845 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS21845 PF12911 N-terminal TM domain of oligopeptide transport permease C AL475_RS21850 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS21855 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL475_RS21860 PF00158 Sigma-54 interaction domain AL475_RS21860 PF02954 Bacterial regulatory protein, Fis family AL475_RS21865 PF04012 PspA/IM30 family AL475_RS21870 PF06667 Phage shock protein B AL475_RS21880 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL475_RS21880 PF00529 HlyD membrane-fusion protein of T1SS AL475_RS21885 PF13533 Biotin-lipoyl like AL475_RS21890 PF00873 AcrB/AcrD/AcrF family AL475_RS21895 PF13673 Acetyltransferase (GNAT) domain AL475_RS21895 PF00117 Glutamine amidotransferase class-I AL475_RS21895 PF03352 Methyladenine glycosylase AL475_RS21895 PF00958 GMP synthase C terminal domain AL475_RS21895 PF13302 Acetyltransferase (GNAT) domain AL475_RS21910 PF02683 Cytochrome C biogenesis protein transmembrane region AL475_RS21910 PF11412 Disulphide bond corrector protein DsbC AL475_RS21925 PF01053 Cys/Met metabolism PLP-dependent enzyme AL475_RS21930 PF13091 PLD-like domain AL475_RS21930 PF13396 Phospholipase_D-nuclease N-terminal AL475_RS21935 PF00209 Sodium:neurotransmitter symporter family AL475_RS21940 PF00206 Lyase AL475_RS21940 PF10415 Fumarase C C-terminus AL475_RS21945 PF00873 AcrB/AcrD/AcrF family AL475_RS21955 PF00849 RNA pseudouridylate synthase AL475_RS21965 PF00701 Dihydrodipicolinate synthetase family AL475_RS21970 PF01066 CDP-alcohol phosphatidyltransferase AL475_RS21975 PF00005 ABC transporter AL475_RS21980 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS21985 PF13416 Bacterial extracellular solute-binding protein AL475_RS21995 PF06945 Protein of unknown function (DUF1289) AL475_RS22010 PF00005 ABC transporter AL475_RS22020 PF03222 Tryptophan/tyrosine permease family AL475_RS22035 PF00990 Diguanylate cyclase, GGDEF domain AL475_RS22040 PF01717 Cobalamin-independent synthase, Catalytic domain AL475_RS22050 PF00313 'Cold-shock' DNA-binding domain AL475_RS22060 PF02028 BCCT, betaine/carnitine/choline family transporter AL475_RS22065 PF03466 LysR substrate binding domain AL475_RS22065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS22070 PF00884 Sulfatase AL475_RS22075 PF04055 Radical SAM superfamily AL475_RS22075 PF13186 Iron-sulfur cluster-binding domain AL475_RS22080 PF17863 AAA lid domain AL475_RS22080 PF07726 ATPase family associated with various cellular activities (AAA) AL475_RS22095 PF00092 von Willebrand factor type A domain AL475_RS22115 PF01386 Ribosomal L25p family AL475_RS22120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL475_RS22125 PF00072 Response regulator receiver domain AL475_RS22125 PF00486 Transcriptional regulatory protein, C terminal AL475_RS22135 PF04851 Type III restriction enzyme, res subunit AL475_RS22135 PF00271 Helicase conserved C-terminal domain AL475_RS22140 PF01479 S4 domain AL475_RS22140 PF00849 RNA pseudouridylate synthase AL475_RS22145 PF07690 Major Facilitator Superfamily AL475_RS22155 PF11066 Protein of unknown function (DUF2867) AL475_RS22155 PF13460 NAD(P)H-binding AL475_RS22160 PF01554 MatE AL475_RS22165 PF00005 ABC transporter AL475_RS22180 PF06965 Na+/H+ antiporter 1 AL475_RS22185 PF05736 OprF membrane domain AL475_RS22185 PF00691 OmpA family AL475_RS22205 PF00202 Aminotransferase class-III AL475_RS22210 PF03435 Saccharopine dehydrogenase NADP binding domain AL475_RS22210 PF16653 Saccharopine dehydrogenase C-terminal domain AL475_RS22220 PF17200 Single Cache domain 2 AL475_RS22220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL475_RS22220 PF00672 HAMP domain AL475_RS22230 PF03480 Bacterial extracellular solute-binding protein, family 7 AL475_RS22240 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AL475_RS22245 PF01202 Shikimate kinase AL475_RS22250 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AL475_RS22250 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AL475_RS22260 PF00994 Probable molybdopterin binding domain AL475_RS22270 PF00175 Oxidoreductase NAD-binding domain AL475_RS22270 PF00111 2Fe-2S iron-sulfur cluster binding domain AL475_RS22270 PF00970 Oxidoreductase FAD-binding domain AL475_RS22275 PF00268 Ribonucleotide reductase, small chain AL475_RS22280 PF03477 ATP cone domain AL475_RS22280 PF02867 Ribonucleotide reductase, barrel domain AL475_RS22280 PF00317 Ribonucleotide reductase, all-alpha domain AL475_RS22290 PF00521 DNA gyrase/topoisomerase IV, subunit A AL475_RS22290 PF03989 DNA gyrase C-terminal domain, beta-propeller AL475_RS22300 PF00925 GTP cyclohydrolase II AL475_RS22325 PF03734 L,D-transpeptidase catalytic domain AL475_RS22325 PF01471 Putative peptidoglycan binding domain AL475_RS22330 PF05951 Bacterial protein of unknown function (DUF882) AL475_RS22335 PF00753 Metallo-beta-lactamase superfamily AL475_RS22350 PF03480 Bacterial extracellular solute-binding protein, family 7 AL475_RS22360 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AL475_RS22365 PF07730 Histidine kinase AL475_RS22365 PF17200 Single Cache domain 2 AL475_RS22370 PF00196 Bacterial regulatory proteins, luxR family AL475_RS22370 PF00072 Response regulator receiver domain AL475_RS22375 PF01047 MarR family AL475_RS22380 PF02028 BCCT, betaine/carnitine/choline family transporter AL475_RS22385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL475_RS22385 PF00672 HAMP domain AL475_RS22390 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AL475_RS22390 PF07733 Bacterial DNA polymerase III alpha NTPase domain AL475_RS22390 PF00929 Exonuclease AL475_RS22390 PF14579 Helix-hairpin-helix motif AL475_RS22390 PF02811 PHP domain AL475_RS22395 PF00478 IMP dehydrogenase / GMP reductase domain AL475_RS22395 PF00571 CBS domain AL475_RS22405 PF00155 Aminotransferase class I and II AL475_RS22420 PF01336 OB-fold nucleic acid binding domain AL475_RS22420 PF00152 tRNA synthetases class II (D, K and N) AL475_RS22425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL475_RS22425 PF17200 Single Cache domain 2 AL475_RS22425 PF00672 HAMP domain AL475_RS22430 PF01242 6-pyruvoyl tetrahydropterin synthase AL475_RS22435 PF02321 Outer membrane efflux protein AL475_RS22440 PF12704 MacB-like periplasmic core domain AL475_RS22440 PF00005 ABC transporter AL475_RS22440 PF02687 FtsX-like permease family AL475_RS22445 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL475_RS22450 PF03315 Serine dehydratase beta chain AL475_RS22450 PF03313 Serine dehydratase alpha chain AL475_RS22455 PF03222 Tryptophan/tyrosine permease family AL475_RS22460 PF00293 NUDIX domain AL475_RS22470 PF00072 Response regulator receiver domain AL475_RS22470 PF09308 LuxQ, periplasmic AL475_RS22470 PF00512 His Kinase A (phospho-acceptor) domain AL475_RS22470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL475_RS22475 PF04715 Anthranilate synthase component I, N terminal region AL475_RS22475 PF00425 chorismate binding enzyme AL475_RS22490 PF04317 YcjX-like family, DUF463 AL475_RS22495 PF05128 Domain of unknown function (DUF697) AL475_RS22500 PF00158 Sigma-54 interaction domain AL475_RS22500 PF18024 Helix-turn-helix domain AL475_RS22505 PF13302 Acetyltransferase (GNAT) domain AL475_RS22520 PF00892 EamA-like transporter family AL475_RS22525 PF00939 Sodium:sulfate symporter transmembrane region AL475_RS22530 PF00512 His Kinase A (phospho-acceptor) domain AL475_RS22530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL475_RS22530 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL475_RS22535 PF02954 Bacterial regulatory protein, Fis family AL475_RS22535 PF00158 Sigma-54 interaction domain AL475_RS22535 PF00072 Response regulator receiver domain AL475_RS22540 PF03466 LysR substrate binding domain AL475_RS22540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL475_RS22545 PF03992 Antibiotic biosynthesis monooxygenase AL475_RS22550 PF00881 Nitroreductase family AL475_RS22555 PF04400 (Na+)-NQR maturation NqrM AL475_RS22565 PF02837 Glycosyl hydrolases family 2, sugar binding domain AL475_RS22565 PF00703 Glycosyl hydrolases family 2 AL475_RS22565 PF16353 Domain of unknown function(DUF4981) AL475_RS22565 PF02929 Beta galactosidase small chain AL475_RS22565 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AL475_RS22570 PF13407 Periplasmic binding protein domain AL475_RS22575 PF00005 ABC transporter AL475_RS22580 PF02653 Branched-chain amino acid transport system / permease component AL475_RS22590 PF01970 Tripartite tricarboxylate transporter TctA family AL475_RS22610 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AL475_RS22610 PF02805 Metal binding domain of Ada AL475_RS22610 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AL475_RS22610 PF12833 Helix-turn-helix domain AL475_RS22625 PF00285 Citrate synthase, C-terminal domain AL475_RS22630 PF00694 Aconitase C-terminal domain AL475_RS22630 PF00330 Aconitase family (aconitate hydratase) AL475_RS22635 PF04303 PrpF protein AL475_RS22640 PF13193 AMP-binding enzyme C-terminal domain AL475_RS22640 PF00501 AMP-binding enzyme AL475_RS22640 PF16177 Acetyl-coenzyme A synthetase N-terminus AL475_RS22650 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL475_RS22650 PF00529 HlyD membrane-fusion protein of T1SS AL475_RS22655 PF07690 Major Facilitator Superfamily AL475_RS22670 PF01546 Peptidase family M20/M25/M40 AL475_RS22670 PF07687 Peptidase dimerisation domain AL475_RS22675 PF12792 CSS motif domain associated with EAL AL475_RS22675 PF00563 EAL domain AL475_RS22680 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL475_RS22685 PF04209 homogentisate 1,2-dioxygenase AL475_RS22695 PF02798 Glutathione S-transferase, N-terminal domain AL475_RS22695 PF14497 Glutathione S-transferase, C-terminal domain AL475_RS22715 PF04074 YhcH/YjgK/YiaL AL475_RS22725 PF03009 Glycerophosphoryl diester phosphodiesterase family AL475_RS22730 PF08220 DeoR-like helix-turn-helix domain AL475_RS22730 PF00455 DeoR C terminal sensor domain AL475_RS22735 PF00005 ABC transporter AL475_RS22735 PF17912 MalK OB fold domain AL475_RS22740 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS22745 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS22750 PF13416 Bacterial extracellular solute-binding protein AL475_RS22755 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AL475_RS22755 PF00056 lactate/malate dehydrogenase, NAD binding domain AL475_RS22760 PF00753 Metallo-beta-lactamase superfamily AL475_RS22765 PF08212 Lipocalin-like domain AL475_RS22775 PF01618 MotA/TolQ/ExbB proton channel family AL475_RS22780 PF01618 MotA/TolQ/ExbB proton channel family AL475_RS22785 PF02472 Biopolymer transport protein ExbD/TolR AL475_RS22790 PF03544 Gram-negative bacterial TonB protein C-terminal AL475_RS22805 PF01734 Patatin-like phospholipase AL475_RS22810 PF01068 ATP dependent DNA ligase domain AL475_RS22810 PF14743 DNA ligase OB-like domain AL475_RS22820 PF01554 MatE AL475_RS22825 PF00677 Lumazine binding domain AL475_RS22835 PF03881 Fructosamine kinase AL475_RS22845 PF00877 NlpC/P60 family AL475_RS22850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL475_RS22850 PF02743 Cache domain AL475_RS22850 PF00672 HAMP domain AL475_RS22860 PF03942 DTW domain AL475_RS22865 PF00480 ROK family AL475_RS22875 PF03453 MoeA N-terminal region (domain I and II) AL475_RS22875 PF03454 MoeA C-terminal region (domain IV) AL475_RS22875 PF00994 Probable molybdopterin binding domain AL475_RS22880 PF12804 MobA-like NTP transferase domain AL475_RS22885 PF00005 ABC transporter AL475_RS22885 PF08402 TOBE domain AL475_RS22890 PF00528 Binding-protein-dependent transport system inner membrane component AL475_RS22895 PF12849 PBP superfamily domain AL475_RS22900 PF00158 Sigma-54 interaction domain AL475_RS22900 PF02954 Bacterial regulatory protein, Fis family AL475_RS22900 PF00072 Response regulator receiver domain AL475_RS22905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL475_RS22905 PF00512 His Kinase A (phospho-acceptor) domain AL475_RS22905 PF00989 PAS fold AL475_RS22920 PF02634 FdhD/NarQ family AL475_RS22940 PF02613 Nitrate reductase delta subunit