locus-tag class description NIN90_RS00005 PF00308 Bacterial dnaA protein NIN90_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix NIN90_RS00005 PF11638 DnaA N-terminal domain NIN90_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain NIN90_RS00010 PF02767 DNA polymerase III beta subunit, central domain NIN90_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain NIN90_RS00015 PF02463 RecF/RecN/SMC N terminal domain NIN90_RS00020 PF01751 Toprim domain NIN90_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIN90_RS00020 PF18053 DNA gyrase B subunit insert domain NIN90_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus NIN90_RS00020 PF00204 DNA gyrase B NIN90_RS00030 PF00011 Hsp20/alpha crystallin family NIN90_RS00035 PF00155 Aminotransferase class I and II NIN90_RS00040 PF05746 DALR anticodon binding domain NIN90_RS00040 PF02092 Glycyl-tRNA synthetase beta subunit NIN90_RS00045 PF02091 Glycyl-tRNA synthetase alpha subunit NIN90_RS00050 PF01169 Uncharacterized protein family UPF0016 NIN90_RS00060 PF01206 Sulfurtransferase TusA NIN90_RS00070 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS00080 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS00085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS00085 PF03466 LysR substrate binding domain NIN90_RS00090 PF08240 Alcohol dehydrogenase GroES-like domain NIN90_RS00090 PF00107 Zinc-binding dehydrogenase NIN90_RS00095 PF00585 C-terminal regulatory domain of Threonine dehydratase NIN90_RS00095 PF00291 Pyridoxal-phosphate dependent enzyme NIN90_RS00100 PF00920 Dehydratase family NIN90_RS00105 PF01063 Amino-transferase class IV NIN90_RS00115 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NIN90_RS00115 PF00205 Thiamine pyrophosphate enzyme, central domain NIN90_RS00115 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NIN90_RS00120 PF01078 Magnesium chelatase, subunit ChlI NIN90_RS00120 PF13335 Magnesium chelatase, subunit ChlI C-terminal NIN90_RS00125 PF01553 Acyltransferase NIN90_RS00130 PF01323 DSBA-like thioredoxin domain NIN90_RS00135 PF01636 Phosphotransferase enzyme family NIN90_RS00140 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase NIN90_RS00140 PF13746 4Fe-4S dicluster domain NIN90_RS00140 PF12801 4Fe-4S binding domain NIN90_RS00145 PF06288 Protein of unknown function (DUF1040) NIN90_RS00150 PF07070 SpoOM protein NIN90_RS00155 PF03006 Haemolysin-III related NIN90_RS00165 PF02386 Cation transport protein NIN90_RS00170 PF02080 TrkA-C domain NIN90_RS00170 PF02254 TrkA-N domain NIN90_RS00175 PF01189 16S rRNA methyltransferase RsmB/F NIN90_RS00175 PF01029 NusB family NIN90_RS00180 PF02911 Formyl transferase, C-terminal domain NIN90_RS00180 PF00551 Formyl transferase NIN90_RS00185 PF01327 Polypeptide deformylase NIN90_RS00195 PF02481 DNA recombination-mediator protein A NIN90_RS00195 PF17782 DprA winged helix domain NIN90_RS00200 PF04361 Protein of unknown function (DUF494) NIN90_RS00205 PF01396 Topoisomerase DNA binding C4 zinc finger NIN90_RS00210 PF02222 ATP-grasp domain NIN90_RS00210 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NIN90_RS00215 PF00731 AIR carboxylase NIN90_RS00220 PF01300 Telomere recombination NIN90_RS00225 PF01218 Coproporphyrinogen III oxidase NIN90_RS00230 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NIN90_RS00230 PF01488 Shikimate / quinate 5-dehydrogenase NIN90_RS00230 PF08501 Shikimate dehydrogenase substrate binding domain NIN90_RS00235 PF07369 Protein of unknown function (DUF1488) NIN90_RS00240 PF00132 Bacterial transferase hexapeptide (six repeats) NIN90_RS00280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS00280 PF03466 LysR substrate binding domain NIN90_RS00285 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NIN90_RS00285 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NIN90_RS00290 PF04380 Membrane fusogenic activity NIN90_RS00295 PF00873 AcrB/AcrD/AcrF family NIN90_RS00300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NIN90_RS00305 PF00440 Bacterial regulatory proteins, tetR family NIN90_RS00310 PF00580 UvrD/REP helicase N-terminal domain NIN90_RS00310 PF13361 UvrD-like helicase C-terminal domain NIN90_RS00315 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NIN90_RS00345 PF00005 ABC transporter NIN90_RS00345 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NIN90_RS00350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NIN90_RS00355 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS00360 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS00360 PF12911 N-terminal TM domain of oligopeptide transport permease C NIN90_RS00395 PF00873 AcrB/AcrD/AcrF family NIN90_RS00400 PF00529 HlyD membrane-fusion protein of T1SS NIN90_RS00400 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NIN90_RS00410 PF12802 MarR family NIN90_RS00415 PF07992 Pyridine nucleotide-disulphide oxidoreductase NIN90_RS00415 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NIN90_RS00420 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ NIN90_RS00425 PF01432 Peptidase family M3 NIN90_RS00445 PF05114 Protein of unknown function (DUF692) NIN90_RS00455 PF13361 UvrD-like helicase C-terminal domain NIN90_RS00455 PF00580 UvrD/REP helicase N-terminal domain NIN90_RS00465 PF01810 LysE type translocator NIN90_RS00475 PF00892 EamA-like transporter family NIN90_RS00480 PF16124 RecQ zinc-binding NIN90_RS00480 PF00570 HRDC domain NIN90_RS00480 PF00270 DEAD/DEAH box helicase NIN90_RS00480 PF00271 Helicase conserved C-terminal domain NIN90_RS00480 PF09382 RQC domain NIN90_RS00495 PF00005 ABC transporter NIN90_RS00495 PF00664 ABC transporter transmembrane region NIN90_RS00500 PF07715 TonB-dependent Receptor Plug Domain NIN90_RS00500 PF00593 TonB dependent receptor NIN90_RS00505 PF00005 ABC transporter NIN90_RS00510 PF01497 Periplasmic binding protein NIN90_RS00515 PF01032 FecCD transport family NIN90_RS00520 PF03350 Uncharacterized protein family, UPF0114 NIN90_RS00525 PF03755 YicC-like family, N-terminal region NIN90_RS00525 PF08340 Domain of unknown function (DUF1732) NIN90_RS00530 PF03725 3' exoribonuclease family, domain 2 NIN90_RS00530 PF01138 3' exoribonuclease family, domain 1 NIN90_RS00535 PF00156 Phosphoribosyl transferase domain NIN90_RS00540 PF03279 Bacterial lipid A biosynthesis acyltransferase NIN90_RS00545 PF00440 Bacterial regulatory proteins, tetR family NIN90_RS00550 PF02441 Flavoprotein NIN90_RS00550 PF04127 DNA / pantothenate metabolism flavoprotein NIN90_RS00555 PF00672 HAMP domain NIN90_RS00555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIN90_RS00555 PF17200 Single Cache domain 2 NIN90_RS00560 PF04002 RadC-like JAB domain NIN90_RS00565 PF00830 Ribosomal L28 family NIN90_RS00570 PF00471 Ribosomal protein L33 NIN90_RS00580 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NIN90_RS00580 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NIN90_RS00580 PF06827 Zinc finger found in FPG and IleRS NIN90_RS00585 PF01370 NAD dependent epimerase/dehydratase family NIN90_RS00595 PF01467 Cytidylyltransferase-like NIN90_RS00600 PF13439 Glycosyltransferase Family 4 NIN90_RS00600 PF00534 Glycosyl transferases group 1 NIN90_RS00605 PF13439 Glycosyltransferase Family 4 NIN90_RS00605 PF00534 Glycosyl transferases group 1 NIN90_RS00610 PF00535 Glycosyl transferase family 2 NIN90_RS00615 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NIN90_RS00625 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) NIN90_RS00630 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NIN90_RS00645 PF00534 Glycosyl transferases group 1 NIN90_RS00645 PF13439 Glycosyltransferase Family 4 NIN90_RS00660 PF03279 Bacterial lipid A biosynthesis acyltransferase NIN90_RS00665 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NIN90_RS00665 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NIN90_RS00665 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NIN90_RS00670 PF01370 NAD dependent epimerase/dehydratase family NIN90_RS00675 PF06082 Exopolysaccharide biosynthesis protein YbjH NIN90_RS00685 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF NIN90_RS00695 PF18412 Outer-membrane lipoprotein Wza C-terminal domain NIN90_RS00695 PF10531 SLBB domain NIN90_RS00695 PF02563 Polysaccharide biosynthesis/export protein NIN90_RS00700 PF01451 Low molecular weight phosphotyrosine protein phosphatase NIN90_RS00705 PF13807 G-rich domain on putative tyrosine kinase NIN90_RS00705 PF13614 AAA domain NIN90_RS00705 PF02706 Chain length determinant protein NIN90_RS00710 PF01609 Transposase DDE domain NIN90_RS00710 PF13808 DDE_Tnp_1-associated NIN90_RS00715 PF01609 Transposase DDE domain NIN90_RS00715 PF13808 DDE_Tnp_1-associated NIN90_RS00720 PF01609 Transposase DDE domain NIN90_RS00720 PF13808 DDE_Tnp_1-associated NIN90_RS00725 PF01609 Transposase DDE domain NIN90_RS00725 PF13808 DDE_Tnp_1-associated NIN90_RS00730 PF01609 Transposase DDE domain NIN90_RS00730 PF13808 DDE_Tnp_1-associated NIN90_RS00740 PF01943 Polysaccharide biosynthesis protein NIN90_RS00755 PF00535 Glycosyl transferase family 2 NIN90_RS00775 PF08942 Domain of unknown function (DUF1919) NIN90_RS00780 PF01609 Transposase DDE domain NIN90_RS00780 PF13808 DDE_Tnp_1-associated NIN90_RS00845 PF00953 Glycosyl transferase family 4 NIN90_RS00860 PF16363 GDP-mannose 4,6 dehydratase NIN90_RS00865 PF00483 Nucleotidyl transferase NIN90_RS00875 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NIN90_RS00875 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NIN90_RS00900 PF13193 AMP-binding enzyme C-terminal domain NIN90_RS00900 PF00501 AMP-binding enzyme NIN90_RS00905 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase NIN90_RS00910 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NIN90_RS00930 PF13439 Glycosyltransferase Family 4 NIN90_RS00930 PF00534 Glycosyl transferases group 1 NIN90_RS00935 PF00534 Glycosyl transferases group 1 NIN90_RS00940 PF05159 Capsule polysaccharide biosynthesis protein NIN90_RS00945 PF02397 Bacterial sugar transferase NIN90_RS00950 PF10996 Beta-Casp domain NIN90_RS00950 PF00753 Metallo-beta-lactamase superfamily NIN90_RS00950 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NIN90_RS00975 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain NIN90_RS00975 PF01464 Transglycosylase SLT domain NIN90_RS00995 PF03167 Uracil DNA glycosylase superfamily NIN90_RS01000 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NIN90_RS01005 PF04222 Protein of unknown function (DUF416) NIN90_RS01010 PF00924 Mechanosensitive ion channel NIN90_RS01015 PF00571 CBS domain NIN90_RS01015 PF01595 Cyclin M transmembrane N-terminal domain NIN90_RS01020 PF00216 Bacterial DNA-binding protein NIN90_RS01030 PF02843 Phosphoribosylglycinamide synthetase, C domain NIN90_RS01030 PF02844 Phosphoribosylglycinamide synthetase, N domain NIN90_RS01030 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NIN90_RS01035 PF02142 MGS-like domain NIN90_RS01035 PF01808 AICARFT/IMPCHase bienzyme NIN90_RS01045 PF13411 MerR HTH family regulatory protein NIN90_RS01050 PF00672 HAMP domain NIN90_RS01050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIN90_RS01050 PF17200 Single Cache domain 2 NIN90_RS01055 PF02954 Bacterial regulatory protein, Fis family NIN90_RS01060 PF01207 Dihydrouridine synthase (Dus) NIN90_RS01070 PF02785 Biotin carboxylase C-terminal domain NIN90_RS01070 PF00289 Biotin carboxylase, N-terminal domain NIN90_RS01070 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NIN90_RS01075 PF00364 Biotin-requiring enzyme NIN90_RS01080 PF01220 Dehydroquinase class II NIN90_RS01085 PF00501 AMP-binding enzyme NIN90_RS01085 PF13193 AMP-binding enzyme C-terminal domain NIN90_RS01085 PF16177 Acetyl-coenzyme A synthetase N-terminus NIN90_RS01100 PF12832 MFS_1 like family NIN90_RS01105 PF00497 Bacterial extracellular solute-binding proteins, family 3 NIN90_RS01105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIN90_RS01105 PF01627 Hpt domain NIN90_RS01105 PF00512 His Kinase A (phospho-acceptor) domain NIN90_RS01105 PF00072 Response regulator receiver domain NIN90_RS01110 PF02541 Ppx/GppA phosphatase family NIN90_RS01115 PF00270 DEAD/DEAH box helicase NIN90_RS01115 PF00271 Helicase conserved C-terminal domain NIN90_RS01120 PF00085 Thioredoxin NIN90_RS01125 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NIN90_RS01125 PF07498 Rho termination factor, N-terminal domain NIN90_RS01125 PF07497 Rho termination factor, RNA-binding domain NIN90_RS01135 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase NIN90_RS01140 PF00175 Oxidoreductase NAD-binding domain NIN90_RS01140 PF00970 Oxidoreductase FAD-binding domain NIN90_RS01140 PF00111 2Fe-2S iron-sulfur cluster binding domain NIN90_RS01145 PF00175 Oxidoreductase NAD-binding domain NIN90_RS01180 PF13091 PLD-like domain NIN90_RS01190 PF01565 FAD binding domain NIN90_RS01190 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NIN90_RS01195 PF02237 Biotin protein ligase C terminal domain NIN90_RS01195 PF03099 Biotin/lipoate A/B protein ligase family NIN90_RS01195 PF08279 HTH domain NIN90_RS01200 PF00485 Phosphoribulokinase / Uridine kinase family NIN90_RS01225 PF03144 Elongation factor Tu domain 2 NIN90_RS01225 PF03143 Elongation factor Tu C-terminal domain NIN90_RS01225 PF00009 Elongation factor Tu GTP binding domain NIN90_RS01230 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NIN90_RS01235 PF02357 Transcription termination factor nusG NIN90_RS01235 PF00467 KOW motif NIN90_RS01240 PF00298 Ribosomal protein L11, RNA binding domain NIN90_RS01240 PF03946 Ribosomal protein L11, N-terminal domain NIN90_RS01245 PF00687 Ribosomal protein L1p/L10e family NIN90_RS01250 PF00466 Ribosomal protein L10 NIN90_RS01255 PF00542 Ribosomal protein L7/L12 C-terminal domain NIN90_RS01255 PF16320 Ribosomal protein L7/L12 dimerisation domain NIN90_RS01260 PF04560 RNA polymerase Rpb2, domain 7 NIN90_RS01260 PF00562 RNA polymerase Rpb2, domain 6 NIN90_RS01260 PF04565 RNA polymerase Rpb2, domain 3 NIN90_RS01260 PF04561 RNA polymerase Rpb2, domain 2 NIN90_RS01260 PF04563 RNA polymerase beta subunit NIN90_RS01260 PF10385 RNA polymerase beta subunit external 1 domain NIN90_RS01265 PF00623 RNA polymerase Rpb1, domain 2 NIN90_RS01265 PF04983 RNA polymerase Rpb1, domain 3 NIN90_RS01265 PF05000 RNA polymerase Rpb1, domain 4 NIN90_RS01265 PF04998 RNA polymerase Rpb1, domain 5 NIN90_RS01265 PF04997 RNA polymerase Rpb1, domain 1 NIN90_RS01270 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ NIN90_RS01275 PF00293 NUDIX domain NIN90_RS01275 PF09297 NADH pyrophosphatase zinc ribbon domain NIN90_RS01280 PF01208 Uroporphyrinogen decarboxylase (URO-D) NIN90_RS01285 PF08360 QacR-like protein, C-terminal region NIN90_RS01285 PF00440 Bacterial regulatory proteins, tetR family NIN90_RS01295 PF01551 Peptidase family M23 NIN90_RS01300 PF01676 Metalloenzyme superfamily NIN90_RS01300 PF06415 BPG-independent PGAM N-terminus (iPGM_N) NIN90_RS01310 PF00672 HAMP domain NIN90_RS01310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIN90_RS01310 PF02743 Cache domain NIN90_RS01315 PF03600 Citrate transporter NIN90_RS01315 PF02080 TrkA-C domain NIN90_RS01320 PF02666 Phosphatidylserine decarboxylase NIN90_RS01325 PF03193 RsgA GTPase NIN90_RS01330 PF00929 Exonuclease NIN90_RS01380 PF08331 Domain of unknown function (DUF1730) NIN90_RS01385 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NIN90_RS01390 PF01520 N-acetylmuramoyl-L-alanine amidase NIN90_RS01395 PF08676 MutL C terminal dimerisation domain NIN90_RS01395 PF01119 DNA mismatch repair protein, C-terminal domain NIN90_RS01405 PF17209 Hfq protein NIN90_RS01410 PF01926 50S ribosome-binding GTPase NIN90_RS01410 PF13167 GTP-binding GTPase N-terminal NIN90_RS01410 PF16360 GTP-binding GTPase Middle Region NIN90_RS01415 PF12221 Bacterial membrane protein N terminal NIN90_RS01415 PF01145 SPFH domain / Band 7 family NIN90_RS01420 PF01145 SPFH domain / Band 7 family NIN90_RS01425 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) NIN90_RS01430 PF04102 SlyX NIN90_RS01440 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NIN90_RS01440 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NIN90_RS01445 PF13309 HTH domain NIN90_RS01445 PF08348 YheO-like PAS domain NIN90_RS01450 PF02635 DsrE/DsrF-like family NIN90_RS01455 PF02635 DsrE/DsrF-like family NIN90_RS01460 PF04077 DsrH like protein NIN90_RS01465 PF00164 Ribosomal protein S12/S23 NIN90_RS01470 PF00177 Ribosomal protein S7p/S5e NIN90_RS01475 PF00679 Elongation factor G C-terminus NIN90_RS01475 PF14492 Elongation Factor G, domain II NIN90_RS01475 PF03764 Elongation factor G, domain IV NIN90_RS01475 PF00009 Elongation factor Tu GTP binding domain NIN90_RS01475 PF03144 Elongation factor Tu domain 2 NIN90_RS01480 PF00009 Elongation factor Tu GTP binding domain NIN90_RS01480 PF03143 Elongation factor Tu C-terminal domain NIN90_RS01480 PF03144 Elongation factor Tu domain 2 NIN90_RS01485 PF04324 BFD-like [2Fe-2S] binding domain NIN90_RS01490 PF00210 Ferritin-like domain NIN90_RS01495 PF01250 Ribosomal protein S6 NIN90_RS01500 PF00436 Single-strand binding protein family NIN90_RS01505 PF01084 Ribosomal protein S18 NIN90_RS01510 PF03948 Ribosomal protein L9, C-terminal domain NIN90_RS01510 PF01281 Ribosomal protein L9, N-terminal domain NIN90_RS01520 PF00772 DnaB-like helicase N terminal domain NIN90_RS01520 PF03796 DnaB-like helicase C terminal domain NIN90_RS01525 PF01168 Alanine racemase, N-terminal domain NIN90_RS01525 PF00842 Alanine racemase, C-terminal domain NIN90_RS01530 PF01894 Uncharacterised protein family UPF0047 NIN90_RS01535 PF00342 Phosphoglucose isomerase NIN90_RS01545 PF01475 Ferric uptake regulator family NIN90_RS01550 PF01207 Dihydrouridine synthase (Dus) NIN90_RS01570 PF00175 Oxidoreductase NAD-binding domain NIN90_RS01570 PF00667 FAD binding domain NIN90_RS01570 PF00258 Flavodoxin NIN90_RS01575 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NIN90_RS01575 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NIN90_RS01580 PF01507 Phosphoadenosine phosphosulfate reductase family NIN90_RS01635 PF01797 Transposase IS200 like NIN90_RS01640 PF00999 Sodium/hydrogen exchanger family NIN90_RS01645 PF02310 B12 binding domain NIN90_RS01645 PF02607 B12 binding domain NIN90_RS01645 PF02965 Vitamin B12 dependent methionine synthase, activation domain NIN90_RS01645 PF00809 Pterin binding enzyme NIN90_RS01645 PF02574 Homocysteine S-methyltransferase NIN90_RS01650 PF00696 Amino acid kinase family NIN90_RS01650 PF01842 ACT domain NIN90_RS01655 PF00266 Aminotransferase class-V NIN90_RS01665 PF17760 UvrA interaction domain NIN90_RS01665 PF17755 UvrA DNA-binding domain NIN90_RS01665 PF00005 ABC transporter NIN90_RS01670 PF00483 Nucleotidyl transferase NIN90_RS01675 PF00196 Bacterial regulatory proteins, luxR family NIN90_RS01680 PF00436 Single-strand binding protein family NIN90_RS01685 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS01685 PF17157 Gammaproteobacterial periplasmic sensor domain NIN90_RS01685 PF00563 EAL domain NIN90_RS01705 PF03958 Bacterial type II/III secretion system short domain NIN90_RS01705 PF00263 Bacterial type II and III secretion system protein NIN90_RS01710 PF01471 Putative peptidoglycan binding domain NIN90_RS01710 PF13401 AAA domain NIN90_RS01720 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NIN90_RS01720 PF00437 Type II/IV secretion system protein NIN90_RS01725 PF00482 Type II secretion system (T2SS), protein F NIN90_RS01735 PF07963 Prokaryotic N-terminal methylation motif NIN90_RS01740 PF00114 Pilin (bacterial filament) NIN90_RS01740 PF07963 Prokaryotic N-terminal methylation motif NIN90_RS01775 PF04085 rod shape-determining protein MreC NIN90_RS01780 PF04093 rod shape-determining protein MreD NIN90_RS01785 PF02545 Maf-like protein NIN90_RS01790 PF10150 Ribonuclease E/G family NIN90_RS01790 PF00575 S1 RNA binding domain NIN90_RS01795 PF13116 Protein of unknown function NIN90_RS01795 PF13502 AsmA-like C-terminal region NIN90_RS01800 PF00795 Carbon-nitrogen hydrolase NIN90_RS01805 PF01523 Putative modulator of DNA gyrase NIN90_RS01810 PF06877 Regulator of ribonuclease activity B NIN90_RS01815 PF01797 Transposase IS200 like NIN90_RS01830 PF00582 Universal stress protein family NIN90_RS01845 PF02863 Arginine repressor, C-terminal domain NIN90_RS01845 PF01316 Arginine repressor, DNA binding domain NIN90_RS01850 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NIN90_RS01850 PF00056 lactate/malate dehydrogenase, NAD binding domain NIN90_RS01855 PF13520 Amino acid permease NIN90_RS01860 PF00348 Polyprenyl synthetase NIN90_RS01865 PF00829 Ribosomal prokaryotic L21 protein NIN90_RS01870 PF01016 Ribosomal L27 protein NIN90_RS01875 PF01926 50S ribosome-binding GTPase NIN90_RS01875 PF01018 GTP1/OBG NIN90_RS01880 PF06738 Putative threonine/serine exporter NIN90_RS01885 PF12821 Threonine/Serine exporter, ThrE NIN90_RS01890 PF00186 Dihydrofolate reductase NIN90_RS01895 PF00149 Calcineurin-like phosphoesterase NIN90_RS01900 PF04379 ApaG domain NIN90_RS01905 PF00398 Ribosomal RNA adenine dimethylase NIN90_RS01910 PF04166 Pyridoxal phosphate biosynthetic protein PdxA NIN90_RS01915 PF09312 SurA N-terminal domain NIN90_RS01920 PF04453 LPS transport system D NIN90_RS01920 PF03968 OstA-like protein NIN90_RS01925 PF05099 Tellurite resistance protein TerB NIN90_RS01925 PF00226 DnaJ domain NIN90_RS01975 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain NIN90_RS01975 PF01464 Transglycosylase SLT domain NIN90_RS01980 PF04362 Bacterial Fe(2+) trafficking NIN90_RS01990 PF01497 Periplasmic binding protein NIN90_RS01995 PF01032 FecCD transport family NIN90_RS02000 PF00005 ABC transporter NIN90_RS02005 PF00730 HhH-GPD superfamily base excision DNA repair protein NIN90_RS02005 PF14815 NUDIX domain NIN90_RS02010 PF02390 Putative methyltransferase NIN90_RS02015 PF04960 Glutaminase NIN90_RS02020 PF06969 HemN C-terminal domain NIN90_RS02020 PF04055 Radical SAM superfamily NIN90_RS02025 PF01725 Ham1 family NIN90_RS02035 PF02594 Uncharacterised ACR, YggU family COG1872 NIN90_RS02040 PF02325 YGGT family NIN90_RS02045 PF03807 NADP oxidoreductase coenzyme F420-dependent NIN90_RS02045 PF14748 Pyrroline-5-carboxylate reductase dimerisation NIN90_RS02050 PF01168 Alanine racemase, N-terminal domain NIN90_RS02055 PF00437 Type II/IV secretion system protein NIN90_RS02060 PF00437 Type II/IV secretion system protein NIN90_RS02065 PF03652 Holliday junction resolvase NIN90_RS02070 PF02622 Uncharacterized ACR, COG1678 NIN90_RS02075 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain NIN90_RS02075 PF02951 Prokaryotic glutathione synthetase, N-terminal domain NIN90_RS02080 PF04452 RNA methyltransferase NIN90_RS02085 PF04231 Endonuclease I NIN90_RS02090 PF10263 SprT-like family NIN90_RS02090 PF17283 SprT-like zinc ribbon domain NIN90_RS02100 PF02773 S-adenosylmethionine synthetase, C-terminal domain NIN90_RS02100 PF02772 S-adenosylmethionine synthetase, central domain NIN90_RS02100 PF00438 S-adenosylmethionine synthetase, N-terminal domain NIN90_RS02105 PF02779 Transketolase, pyrimidine binding domain NIN90_RS02105 PF02780 Transketolase, C-terminal domain NIN90_RS02105 PF00456 Transketolase, thiamine diphosphate binding domain NIN90_RS02110 PF03466 LysR substrate binding domain NIN90_RS02110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS02115 PF07715 TonB-dependent Receptor Plug Domain NIN90_RS02115 PF00593 TonB dependent receptor NIN90_RS02120 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NIN90_RS02120 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NIN90_RS02125 PF00162 Phosphoglycerate kinase NIN90_RS02130 PF01116 Fructose-bisphosphate aldolase class-II NIN90_RS02135 PF00924 Mechanosensitive ion channel NIN90_RS02135 PF05552 Conserved TM helix NIN90_RS02145 PF01810 LysE type translocator NIN90_RS02150 PF03466 LysR substrate binding domain NIN90_RS02150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS02160 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS02165 PF00224 Pyruvate kinase, barrel domain NIN90_RS02165 PF02887 Pyruvate kinase, alpha/beta domain NIN90_RS02170 PF00455 DeoR C terminal sensor domain NIN90_RS02170 PF08220 DeoR-like helix-turn-helix domain NIN90_RS02175 PF01380 SIS domain NIN90_RS02180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS02180 PF03466 LysR substrate binding domain NIN90_RS02185 PF18089 DAPG hydrolase PhiG domain NIN90_RS02200 PF01769 Divalent cation transporter NIN90_RS02200 PF03448 MgtE intracellular N domain NIN90_RS02200 PF00571 CBS domain NIN90_RS02225 PF04546 Sigma-70, non-essential region NIN90_RS02225 PF03979 Sigma-70 factor, region 1.1 NIN90_RS02225 PF00140 Sigma-70 factor, region 1.2 NIN90_RS02225 PF04542 Sigma-70 region 2 NIN90_RS02225 PF04539 Sigma-70 region 3 NIN90_RS02225 PF04545 Sigma-70, region 4 NIN90_RS02230 PF10410 DnaB-helicase binding domain of primase NIN90_RS02230 PF01807 CHC2 zinc finger NIN90_RS02230 PF08278 DNA primase DnaG DnaB-binding NIN90_RS02230 PF08275 DNA primase catalytic core, N-terminal domain NIN90_RS02235 PF09424 Yqey-like protein NIN90_RS02240 PF01165 Ribosomal protein S21 NIN90_RS02245 PF00814 Glycoprotease family NIN90_RS02250 PF00561 alpha/beta hydrolase fold NIN90_RS02250 PF00364 Biotin-requiring enzyme NIN90_RS02255 PF02660 Glycerol-3-phosphate acyltransferase NIN90_RS02260 PF02152 Dihydroneopterin aldolase NIN90_RS02265 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NIN90_RS02270 PF02673 Bacitracin resistance protein BacA NIN90_RS02275 PF04977 Septum formation initiator NIN90_RS02280 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NIN90_RS02285 PF02542 YgbB family NIN90_RS02290 PF01142 tRNA pseudouridine synthase D (TruD) NIN90_RS02295 PF01975 Survival protein SurE NIN90_RS02305 PF01551 Peptidase family M23 NIN90_RS02305 PF01476 LysM domain NIN90_RS02310 PF04545 Sigma-70, region 4 NIN90_RS02310 PF04539 Sigma-70 region 3 NIN90_RS02310 PF04542 Sigma-70 region 2 NIN90_RS02310 PF00140 Sigma-70 factor, region 1.2 NIN90_RS02315 PF01624 MutS domain I NIN90_RS02315 PF00488 MutS domain V NIN90_RS02315 PF05190 MutS family domain IV NIN90_RS02315 PF05188 MutS domain II NIN90_RS02315 PF05192 MutS domain III NIN90_RS02320 PF02464 Competence-damaged protein NIN90_RS02325 PF00154 recA bacterial DNA recombination protein NIN90_RS02330 PF02631 RecX family NIN90_RS02335 PF01411 tRNA synthetases class II (A) NIN90_RS02335 PF02272 DHHA1 domain NIN90_RS02335 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NIN90_RS02340 PF13840 ACT domain NIN90_RS02340 PF00696 Amino acid kinase family NIN90_RS02340 PF01842 ACT domain NIN90_RS02345 PF02599 Global regulator protein family NIN90_RS02390 PF04277 Oxaloacetate decarboxylase, gamma chain NIN90_RS02395 PF02436 Conserved carboxylase domain NIN90_RS02395 PF00682 HMGL-like NIN90_RS02395 PF00364 Biotin-requiring enzyme NIN90_RS02400 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit NIN90_RS02405 PF00107 Zinc-binding dehydrogenase NIN90_RS02405 PF08240 Alcohol dehydrogenase GroES-like domain NIN90_RS02410 PF09335 SNARE associated Golgi protein NIN90_RS02415 PF00675 Insulinase (Peptidase family M16) NIN90_RS02415 PF05193 Peptidase M16 inactive domain NIN90_RS02420 PF04262 Glutamate-cysteine ligase NIN90_RS02430 PF02664 S-Ribosylhomocysteinase (LuxS) NIN90_RS02435 PF01595 Cyclin M transmembrane N-terminal domain NIN90_RS02435 PF03471 Transporter associated domain NIN90_RS02435 PF00571 CBS domain NIN90_RS02440 PF01578 Cytochrome C assembly protein NIN90_RS02445 PF00448 SRP54-type protein, GTPase domain NIN90_RS02445 PF02881 SRP54-type protein, helical bundle domain NIN90_RS02445 PF02978 Signal peptide binding domain NIN90_RS02450 PF00886 Ribosomal protein S16 NIN90_RS02455 PF01782 RimM N-terminal domain NIN90_RS02455 PF05239 PRC-barrel domain NIN90_RS02460 PF01746 tRNA (Guanine-1)-methyltransferase NIN90_RS02465 PF01245 Ribosomal protein L19 NIN90_RS02470 PF13180 PDZ domain NIN90_RS02475 PF00595 PDZ domain NIN90_RS02480 PF06295 Protein of unknown function (DUF1043) NIN90_RS02485 PF03969 AFG1-like ATPase NIN90_RS02490 PF00572 Ribosomal protein L13 NIN90_RS02495 PF00380 Ribosomal protein S9/S16 NIN90_RS02505 PF00355 Rieske [2Fe-2S] domain NIN90_RS02505 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal NIN90_RS02510 PF00032 Cytochrome b(C-terminal)/b6/petD NIN90_RS02510 PF00033 Cytochrome b/b6/petB NIN90_RS02515 PF02167 Cytochrome C1 family NIN90_RS02520 PF00043 Glutathione S-transferase, C-terminal domain NIN90_RS02520 PF02798 Glutathione S-transferase, N-terminal domain NIN90_RS02525 PF04386 Stringent starvation protein B NIN90_RS02530 PF04972 BON domain NIN90_RS02535 PF13580 SIS domain NIN90_RS02540 PF02021 Uncharacterised protein family UPF0102 NIN90_RS02545 PF04348 LppC putative lipoprotein NIN90_RS02550 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NIN90_RS02560 PF01795 MraW methylase family NIN90_RS02565 PF04999 Cell division protein FtsL NIN90_RS02570 PF03717 Penicillin-binding Protein dimerisation domain NIN90_RS02570 PF00905 Penicillin binding protein transpeptidase domain NIN90_RS02575 PF01225 Mur ligase family, catalytic domain NIN90_RS02575 PF02875 Mur ligase family, glutamate ligase domain NIN90_RS02575 PF08245 Mur ligase middle domain NIN90_RS02580 PF08245 Mur ligase middle domain NIN90_RS02580 PF01225 Mur ligase family, catalytic domain NIN90_RS02580 PF02875 Mur ligase family, glutamate ligase domain NIN90_RS02585 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 NIN90_RS02585 PF00953 Glycosyl transferase family 4 NIN90_RS02590 PF02875 Mur ligase family, glutamate ligase domain NIN90_RS02590 PF08245 Mur ligase middle domain NIN90_RS02595 PF01098 Cell cycle protein NIN90_RS02600 PF04101 Glycosyltransferase family 28 C-terminal domain NIN90_RS02600 PF03033 Glycosyltransferase family 28 N-terminal domain NIN90_RS02605 PF02875 Mur ligase family, glutamate ligase domain NIN90_RS02605 PF01225 Mur ligase family, catalytic domain NIN90_RS02605 PF08245 Mur ligase middle domain NIN90_RS02610 PF08478 POTRA domain, FtsQ-type NIN90_RS02610 PF03799 Cell division protein FtsQ NIN90_RS02615 PF02491 SHS2 domain inserted in FTSA NIN90_RS02620 PF12327 FtsZ family, C-terminal domain NIN90_RS02620 PF00091 Tubulin/FtsZ family, GTPase domain NIN90_RS02625 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase NIN90_RS02635 PF02810 SEC-C motif NIN90_RS02635 PF07517 SecA DEAD-like domain NIN90_RS02635 PF01043 SecA preprotein cross-linking domain NIN90_RS02635 PF07516 SecA Wing and Scaffold domain NIN90_RS02640 PF00293 NUDIX domain NIN90_RS02645 PF01113 Dihydrodipicolinate reductase, N-terminus NIN90_RS02645 PF05173 Dihydrodipicolinate reductase, C-terminus NIN90_RS02650 PF00117 Glutamine amidotransferase class-I NIN90_RS02650 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NIN90_RS02655 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NIN90_RS02655 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NIN90_RS02655 PF02142 MGS-like domain NIN90_RS02665 PF05870 Phenolic acid decarboxylase (PAD) NIN90_RS02670 PF01925 Sulfite exporter TauE/SafE NIN90_RS02675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS02675 PF03466 LysR substrate binding domain NIN90_RS02695 PF03458 UPF0126 domain NIN90_RS02700 PF01497 Periplasmic binding protein NIN90_RS02705 PF17113 Regulatory signalling modulator protein AmpE NIN90_RS02705 PF03186 CobD/Cbib protein NIN90_RS02710 PF01048 Phosphorylase superfamily NIN90_RS02720 PF07992 Pyridine nucleotide-disulphide oxidoreductase NIN90_RS02720 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NIN90_RS02725 PF00310 Glutamine amidotransferases class-II NIN90_RS02725 PF04898 Glutamate synthase central domain NIN90_RS02725 PF01645 Conserved region in glutamate synthase NIN90_RS02725 PF01493 GXGXG motif NIN90_RS02730 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NIN90_RS02730 PF07992 Pyridine nucleotide-disulphide oxidoreductase NIN90_RS02735 PF01493 GXGXG motif NIN90_RS02735 PF04898 Glutamate synthase central domain NIN90_RS02735 PF00310 Glutamine amidotransferases class-II NIN90_RS02735 PF01645 Conserved region in glutamate synthase NIN90_RS02740 PF04055 Radical SAM superfamily NIN90_RS02740 PF16199 Radical_SAM C-terminal domain NIN90_RS02745 PF00563 EAL domain NIN90_RS02745 PF01590 GAF domain NIN90_RS02745 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS02745 PF00360 Phytochrome region NIN90_RS02750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIN90_RS02750 PF00512 His Kinase A (phospho-acceptor) domain NIN90_RS02750 PF01627 Hpt domain NIN90_RS02750 PF00989 PAS fold NIN90_RS02750 PF00072 Response regulator receiver domain NIN90_RS02750 PF18415 Histidine kinase receptor ArcB trans-membrane domain NIN90_RS02760 PF00486 Transcriptional regulatory protein, C terminal NIN90_RS02760 PF00072 Response regulator receiver domain NIN90_RS02770 PF03737 Aldolase/RraA NIN90_RS02780 PF00696 Amino acid kinase family NIN90_RS02780 PF13840 ACT domain NIN90_RS02780 PF00742 Homoserine dehydrogenase NIN90_RS02780 PF03447 Homoserine dehydrogenase, NAD binding domain NIN90_RS02780 PF01842 ACT domain NIN90_RS02785 PF08544 GHMP kinases C terminal NIN90_RS02785 PF00288 GHMP kinases N terminal domain NIN90_RS02790 PF00291 Pyridoxal-phosphate dependent enzyme NIN90_RS02790 PF14821 Threonine synthase N terminus NIN90_RS02795 PF01228 Glycine radical NIN90_RS02800 PF01261 Xylose isomerase-like TIM barrel NIN90_RS02805 PF03167 Uracil DNA glycosylase superfamily NIN90_RS02820 PF01235 Sodium:alanine symporter family NIN90_RS02825 PF03883 Peroxide stress protein YaaA NIN90_RS02835 PF01026 TatD related DNase NIN90_RS02840 PF07670 Nucleoside recognition NIN90_RS02840 PF07662 Na+ dependent nucleoside transporter C-terminus NIN90_RS02840 PF01773 Na+ dependent nucleoside transporter N-terminus NIN90_RS02850 PF01791 DeoC/LacD family aldolase NIN90_RS02855 PF02885 Glycosyl transferase family, helical bundle domain NIN90_RS02855 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain NIN90_RS02855 PF00591 Glycosyl transferase family, a/b domain NIN90_RS02860 PF01676 Metalloenzyme superfamily NIN90_RS02865 PF01048 Phosphorylase superfamily NIN90_RS02875 PF18429 Domain of unknown function (DUF5609) NIN90_RS02885 PF18073 Rubredoxin metal binding domain NIN90_RS02890 PF00679 Elongation factor G C-terminus NIN90_RS02890 PF14492 Elongation Factor G, domain II NIN90_RS02890 PF03764 Elongation factor G, domain IV NIN90_RS02890 PF00009 Elongation factor Tu GTP binding domain NIN90_RS02890 PF03144 Elongation factor Tu domain 2 NIN90_RS02895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS02895 PF03466 LysR substrate binding domain NIN90_RS02905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS02905 PF03466 LysR substrate binding domain NIN90_RS02910 PF00501 AMP-binding enzyme NIN90_RS02915 PF12833 Helix-turn-helix domain NIN90_RS02915 PF02311 AraC-like ligand binding domain NIN90_RS02940 PF04972 BON domain NIN90_RS02940 PF00263 Bacterial type II and III secretion system protein NIN90_RS02940 PF13629 Pilus formation protein N terminal region NIN90_RS02970 PF00437 Type II/IV secretion system protein NIN90_RS02990 PF00072 Response regulator receiver domain NIN90_RS02995 PF02417 Chromate transporter NIN90_RS03000 PF01263 Aldose 1-epimerase NIN90_RS03005 PF01588 Putative tRNA binding domain NIN90_RS03015 PF01544 CorA-like Mg2+ transporter protein NIN90_RS03025 PF00583 Acetyltransferase (GNAT) family NIN90_RS03035 PF00962 Adenosine/AMP deaminase NIN90_RS03040 PF14602 Hexapeptide repeat of succinyl-transferase NIN90_RS03040 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle NIN90_RS03045 PF07130 YebG protein NIN90_RS03050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS03050 PF03466 LysR substrate binding domain NIN90_RS03060 PF17946 RecC C-terminal domain NIN90_RS03065 PF12705 PD-(D/E)XK nuclease superfamily NIN90_RS03065 PF00580 UvrD/REP helicase N-terminal domain NIN90_RS03065 PF13361 UvrD-like helicase C-terminal domain NIN90_RS03070 PF13538 UvrD-like helicase C-terminal domain NIN90_RS03080 PF00583 Acetyltransferase (GNAT) family NIN90_RS03080 PF00696 Amino acid kinase family NIN90_RS03090 PF06725 3D domain NIN90_RS03090 PF03562 MltA specific insert domain NIN90_RS03095 PF00899 ThiF family NIN90_RS03100 PF02657 Fe-S metabolism associated domain NIN90_RS03105 PF00266 Aminotransferase class-V NIN90_RS03110 PF01965 DJ-1/PfpI family NIN90_RS03115 PF08546 Ketopantoate reductase PanE/ApbA C terminal NIN90_RS03115 PF02558 Ketopantoate reductase PanE/ApbA NIN90_RS03120 PF03502 Nucleoside-specific channel-forming protein, Tsx NIN90_RS03130 PF04545 Sigma-70, region 4 NIN90_RS03130 PF04542 Sigma-70 region 2 NIN90_RS03140 PF07690 Major Facilitator Superfamily NIN90_RS03145 PF12838 4Fe-4S dicluster domain NIN90_RS03150 PF01136 Peptidase family U32 NIN90_RS03150 PF16325 Peptidase family U32 C-terminal domain NIN90_RS03155 PF04381 Putative exonuclease, RdgC NIN90_RS03160 PF00072 Response regulator receiver domain NIN90_RS03160 PF00486 Transcriptional regulatory protein, C terminal NIN90_RS03165 PF11808 Phosphate regulon sensor protein PhoR NIN90_RS03165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIN90_RS03165 PF00512 His Kinase A (phospho-acceptor) domain NIN90_RS03165 PF00989 PAS fold NIN90_RS03170 PF12849 PBP superfamily domain NIN90_RS03175 PF02541 Ppx/GppA phosphatase family NIN90_RS03180 PF13089 Polyphosphate kinase N-terminal domain NIN90_RS03180 PF17941 Polyphosphate kinase C-terminal domain 1 NIN90_RS03180 PF13090 Polyphosphate kinase C-terminal domain 2 NIN90_RS03180 PF02503 Polyphosphate kinase middle domain NIN90_RS03185 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS03190 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS03195 PF00005 ABC transporter NIN90_RS03200 PF01895 PhoU domain NIN90_RS03205 PF03976 Polyphosphate kinase 2 (PPK2) NIN90_RS03210 PF03932 CutC family NIN90_RS03215 PF10417 C-terminal domain of 1-Cys peroxiredoxin NIN90_RS03215 PF00578 AhpC/TSA family NIN90_RS03220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS03220 PF03466 LysR substrate binding domain NIN90_RS03225 PF01274 Malate synthase NIN90_RS03230 PF00463 Isocitrate lyase family NIN90_RS03235 PF12729 Four helix bundle sensory module for signal transduction NIN90_RS03235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIN90_RS03235 PF00672 HAMP domain NIN90_RS03240 PF00571 CBS domain NIN90_RS03245 PF02547 Queuosine biosynthesis protein NIN90_RS03250 PF01702 Queuine tRNA-ribosyltransferase NIN90_RS03255 PF02699 Preprotein translocase subunit NIN90_RS03260 PF13721 SecD export protein N-terminal TM region NIN90_RS03260 PF02355 Protein export membrane protein NIN90_RS03260 PF07549 SecD/SecF GG Motif NIN90_RS03265 PF02355 Protein export membrane protein NIN90_RS03265 PF07549 SecD/SecF GG Motif NIN90_RS03270 PF00857 Isochorismatase family NIN90_RS03275 PF00459 Inositol monophosphatase family NIN90_RS03280 PF00588 SpoU rRNA Methylase family NIN90_RS03285 PF02082 Transcriptional regulator NIN90_RS03290 PF00266 Aminotransferase class-V NIN90_RS03295 PF01592 NifU-like N terminal domain NIN90_RS03300 PF01521 Iron-sulphur cluster biosynthesis NIN90_RS03305 PF07743 HSCB C-terminal oligomerisation domain NIN90_RS03305 PF00226 DnaJ domain NIN90_RS03310 PF00012 Hsp70 protein NIN90_RS03315 PF00111 2Fe-2S iron-sulfur cluster binding domain NIN90_RS03320 PF04384 Iron-sulphur cluster assembly NIN90_RS03325 PF12404 Peptidase NIN90_RS03325 PF00883 Cytosol aminopeptidase family, catalytic domain NIN90_RS03330 PF00334 Nucleoside diphosphate kinase NIN90_RS03335 PF04055 Radical SAM superfamily NIN90_RS03340 PF13464 Domain of unknown function (DUF4115) NIN90_RS03345 PF04551 GcpE protein NIN90_RS03350 PF03129 Anticodon binding domain NIN90_RS03350 PF13393 Histidyl-tRNA synthetase NIN90_RS03355 PF09976 Tetratricopeptide repeat-like domain NIN90_RS03360 PF13360 PQQ-like domain NIN90_RS03365 PF01926 50S ribosome-binding GTPase NIN90_RS03365 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NIN90_RS03380 PF02601 Exonuclease VII, large subunit NIN90_RS03380 PF13742 OB-fold nucleic acid binding domain NIN90_RS03385 PF00571 CBS domain NIN90_RS03385 PF00478 IMP dehydrogenase / GMP reductase domain NIN90_RS03390 PF00117 Glutamine amidotransferase class-I NIN90_RS03390 PF00958 GMP synthase C terminal domain NIN90_RS03390 PF02540 NAD synthase NIN90_RS03395 PF06483 Chitinase C NIN90_RS03395 PF00704 Glycosyl hydrolases family 18 NIN90_RS03400 PF01184 GPR1/FUN34/yaaH family NIN90_RS03405 PF00486 Transcriptional regulatory protein, C terminal NIN90_RS03415 PF00419 Fimbrial protein NIN90_RS03420 PF13954 PapC N-terminal domain NIN90_RS03420 PF00577 Outer membrane usher protein NIN90_RS03420 PF13953 PapC C-terminal domain NIN90_RS03425 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain NIN90_RS03425 PF02753 Pili assembly chaperone PapD, C-terminal domain NIN90_RS03440 PF01758 Sodium Bile acid symporter family NIN90_RS03445 PF01235 Sodium:alanine symporter family NIN90_RS03455 PF01266 FAD dependent oxidoreductase NIN90_RS03460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS03460 PF03466 LysR substrate binding domain NIN90_RS03465 PF02384 N-6 DNA Methylase NIN90_RS03480 PF01966 HD domain NIN90_RS03480 PF13286 Phosphohydrolase-associated domain NIN90_RS03510 PF00580 UvrD/REP helicase N-terminal domain NIN90_RS03510 PF13361 UvrD-like helicase C-terminal domain NIN90_RS03520 PF13737 Transposase DDE domain NIN90_RS03530 PF00239 Resolvase, N terminal domain NIN90_RS03530 PF02796 Helix-turn-helix domain of resolvase NIN90_RS03550 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) NIN90_RS03550 PF11867 Domain of unknown function (DUF3387) NIN90_RS03550 PF18766 SWI2/SNF2 ATPase NIN90_RS03555 PF01420 Type I restriction modification DNA specificity domain NIN90_RS03560 PF12161 HsdM N-terminal domain NIN90_RS03560 PF02384 N-6 DNA Methylase NIN90_RS03575 PF13356 Arm DNA-binding domain NIN90_RS03575 PF00589 Phage integrase family NIN90_RS03585 PF01668 SmpB protein NIN90_RS03590 PF03364 Polyketide cyclase / dehydrase and lipid transport NIN90_RS03595 PF03658 RnfH family Ubiquitin NIN90_RS03600 PF04355 SmpA / OmlA family NIN90_RS03605 PF02463 RecF/RecN/SMC N terminal domain NIN90_RS03610 PF01513 ATP-NAD kinase NIN90_RS03615 PF01025 GrpE NIN90_RS03620 PF00375 Sodium:dicarboxylate symporter family NIN90_RS03625 PF00012 Hsp70 protein NIN90_RS03630 PF00226 DnaJ domain NIN90_RS03630 PF01556 DnaJ C terminal domain NIN90_RS03630 PF00684 DnaJ central domain NIN90_RS03660 PF03806 AbgT putative transporter family NIN90_RS03665 PF00756 Putative esterase NIN90_RS03670 PF00107 Zinc-binding dehydrogenase NIN90_RS03670 PF08240 Alcohol dehydrogenase GroES-like domain NIN90_RS03675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS03675 PF03466 LysR substrate binding domain NIN90_RS03680 PF14437 MafB19-like deaminase NIN90_RS03685 PF00497 Bacterial extracellular solute-binding proteins, family 3 NIN90_RS03685 PF01464 Transglycosylase SLT domain NIN90_RS03690 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal NIN90_RS03690 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NIN90_RS03690 PF02769 AIR synthase related protein, C-terminal domain NIN90_RS03695 PF07992 Pyridine nucleotide-disulphide oxidoreductase NIN90_RS03695 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NIN90_RS03695 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NIN90_RS03705 PF06786 Uncharacterised protein family (UPF0253) NIN90_RS03715 PF03129 Anticodon binding domain NIN90_RS03715 PF04073 Aminoacyl-tRNA editing domain NIN90_RS03715 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NIN90_RS03720 PF18389 TrmO C-terminal domain NIN90_RS03720 PF01980 tRNA-methyltransferase O NIN90_RS03725 PF01197 Ribosomal protein L31 NIN90_RS03730 PF00444 Ribosomal protein L36 NIN90_RS03735 PF03806 AbgT putative transporter family NIN90_RS03740 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 NIN90_RS03765 PF04287 tRNA pseudouridine synthase C NIN90_RS03770 PF00849 RNA pseudouridylate synthase NIN90_RS03775 PF02780 Transketolase, C-terminal domain NIN90_RS03775 PF02779 Transketolase, pyrimidine binding domain NIN90_RS03775 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NIN90_RS03780 PF00348 Polyprenyl synthetase NIN90_RS03785 PF02609 Exonuclease VII small subunit NIN90_RS03790 PF01618 MotA/TolQ/ExbB proton channel family NIN90_RS03795 PF13677 Membrane MotB of proton-channel complex MotA/MotB NIN90_RS03795 PF00691 OmpA family NIN90_RS03800 PF02568 Thiamine biosynthesis protein (ThiI) NIN90_RS03800 PF02926 THUMP domain NIN90_RS03805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS03805 PF03466 LysR substrate binding domain NIN90_RS03815 PF04241 Protein of unknown function (DUF423) NIN90_RS03820 PF18125 RlmM ferredoxin-like domain NIN90_RS03820 PF01728 FtsJ-like methyltransferase NIN90_RS03825 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NIN90_RS03825 PF01367 5'-3' exonuclease, C-terminal SAM fold NIN90_RS03830 PF11892 Domain of unknown function (DUF3412) NIN90_RS03830 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases NIN90_RS03830 PF03641 Possible lysine decarboxylase NIN90_RS03835 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS03845 PF14489 QueF-like protein NIN90_RS03845 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term NIN90_RS03850 PF07348 Syd protein (SUKH-2) NIN90_RS03855 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) NIN90_RS03860 PF03180 NLPA lipoprotein NIN90_RS03865 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS03870 PF00005 ABC transporter NIN90_RS03870 PF09383 NIL domain NIN90_RS03885 PF00356 Bacterial regulatory proteins, lacI family NIN90_RS03890 PF00367 phosphotransferase system, EIIB NIN90_RS03890 PF02378 Phosphotransferase system, EIIC NIN90_RS03895 PF00128 Alpha amylase, catalytic domain NIN90_RS03895 PF16657 Maltogenic Amylase, C-terminal domain NIN90_RS03920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NIN90_RS03925 PF00873 AcrB/AcrD/AcrF family NIN90_RS03935 PF00464 Serine hydroxymethyltransferase NIN90_RS03945 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family NIN90_RS03945 PF04055 Radical SAM superfamily NIN90_RS03950 PF03099 Biotin/lipoate A/B protein ligase family NIN90_RS03955 PF04359 Protein of unknown function (DUF493) NIN90_RS03960 PF07943 Penicillin-binding protein 5, C-terminal domain NIN90_RS03960 PF00768 D-alanyl-D-alanine carboxypeptidase NIN90_RS03965 PF05036 Sporulation related domain NIN90_RS03965 PF03330 Lytic transglycolase NIN90_RS03970 PF01098 Cell cycle protein NIN90_RS03975 PF00905 Penicillin binding protein transpeptidase domain NIN90_RS03975 PF03717 Penicillin-binding Protein dimerisation domain NIN90_RS03980 PF02590 Predicted SPOUT methyltransferase NIN90_RS03990 PF06144 DNA polymerase III, delta subunit NIN90_RS03990 PF14840 Processivity clamp loader gamma complex DNA pol III C-term NIN90_RS03995 PF04390 Lipopolysaccharide-assembly NIN90_RS04000 PF13603 Leucyl-tRNA synthetase, Domain 2 NIN90_RS04000 PF00133 tRNA synthetases class I (I, L, M and V) NIN90_RS04000 PF08264 Anticodon-binding domain of tRNA NIN90_RS04005 PF07295 Zinc-ribbon containing domain NIN90_RS04010 PF00795 Carbon-nitrogen hydrolase NIN90_RS04015 PF00571 CBS domain NIN90_RS04015 PF03471 Transporter associated domain NIN90_RS04020 PF02130 Uncharacterized protein family UPF0054 NIN90_RS04025 PF02562 PhoH-like protein NIN90_RS04030 PF01938 TRAM domain NIN90_RS04030 PF00919 Uncharacterized protein family UPF0004 NIN90_RS04030 PF04055 Radical SAM superfamily NIN90_RS04035 PF01494 FAD binding domain NIN90_RS04040 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NIN90_RS04045 PF05524 PEP-utilising enzyme, N-terminal NIN90_RS04045 PF00391 PEP-utilising enzyme, mobile domain NIN90_RS04045 PF02896 PEP-utilising enzyme, TIM barrel domain NIN90_RS04050 PF00381 PTS HPr component phosphorylation site NIN90_RS04055 PF00291 Pyridoxal-phosphate dependent enzyme NIN90_RS04065 PF04354 ZipA, C-terminal FtsZ-binding domain NIN90_RS04070 PF00533 BRCA1 C Terminus (BRCT) domain NIN90_RS04070 PF01653 NAD-dependent DNA ligase adenylation domain NIN90_RS04070 PF03120 NAD-dependent DNA ligase OB-fold domain NIN90_RS04070 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NIN90_RS04070 PF12826 Helix-hairpin-helix motif NIN90_RS04075 PF13609 Gram-negative porin NIN90_RS04085 PF13411 MerR HTH family regulatory protein NIN90_RS04095 PF01145 SPFH domain / Band 7 family NIN90_RS04095 PF16200 C-terminal region of band_7 NIN90_RS04100 PF00085 Thioredoxin NIN90_RS04105 PF00106 short chain dehydrogenase NIN90_RS04110 PF08338 Domain of unknown function (DUF1731) NIN90_RS04110 PF01370 NAD dependent epimerase/dehydratase family NIN90_RS04115 PF07556 Protein of unknown function (DUF1538) NIN90_RS04120 PF07556 Protein of unknown function (DUF1538) NIN90_RS04135 PF12850 Calcineurin-like phosphoesterase superfamily domain NIN90_RS04145 PF17323 Trans-membrane regulatory protein ToxS NIN90_RS04150 PF00486 Transcriptional regulatory protein, C terminal NIN90_RS04155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIN90_RS04155 PF00183 Hsp90 protein NIN90_RS04160 PF05191 Adenylate kinase, active site lid NIN90_RS04165 PF00762 Ferrochelatase NIN90_RS04170 PF00854 POT family NIN90_RS04175 PF02357 Transcription termination factor nusG NIN90_RS04180 PF00733 Asparagine synthase NIN90_RS04180 PF13537 Glutamine amidotransferase domain NIN90_RS04185 PF00999 Sodium/hydrogen exchanger family NIN90_RS04185 PF02254 TrkA-N domain NIN90_RS04190 PF01047 MarR family NIN90_RS04190 PF00480 ROK family NIN90_RS04195 PF01979 Amidohydrolase family NIN90_RS04200 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NIN90_RS04200 PF02378 Phosphotransferase system, EIIC NIN90_RS04200 PF00367 phosphotransferase system, EIIB NIN90_RS04205 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain NIN90_RS04205 PF00749 tRNA synthetases class I (E and Q), catalytic domain NIN90_RS04215 PF01416 tRNA pseudouridine synthase NIN90_RS04220 PF01039 Carboxyl transferase domain NIN90_RS04220 PF17848 Acetyl-coA carboxylase zinc finger domain NIN90_RS04225 PF02875 Mur ligase family, glutamate ligase domain NIN90_RS04225 PF08245 Mur ligase middle domain NIN90_RS04230 PF05036 Sporulation related domain NIN90_RS04235 PF02674 Colicin V production protein NIN90_RS04240 PF00156 Phosphoribosyl transferase domain NIN90_RS04245 PF13726 Na+-H+ antiporter family NIN90_RS04245 PF03553 Na+/H+ antiporter family NIN90_RS04250 PF00929 Exonuclease NIN90_RS04255 PF18393 MotY N-terminal domain NIN90_RS04255 PF00691 OmpA family NIN90_RS04260 PF10952 Protein of unknown function (DUF2753) NIN90_RS04265 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NIN90_RS04270 PF00633 Helix-hairpin-helix motif NIN90_RS04270 PF00730 HhH-GPD superfamily base excision DNA repair protein NIN90_RS04270 PF10576 Iron-sulfur binding domain of endonuclease III NIN90_RS04275 PF02508 Rnf-Nqr subunit, membrane protein NIN90_RS04280 PF04205 FMN-binding domain NIN90_RS04285 PF03116 NQR2, RnfD, RnfE family NIN90_RS04290 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NIN90_RS04290 PF12838 4Fe-4S dicluster domain NIN90_RS04290 PF13375 RnfC Barrel sandwich hybrid domain NIN90_RS04290 PF10531 SLBB domain NIN90_RS04295 PF04060 Putative Fe-S cluster NIN90_RS04300 PF02508 Rnf-Nqr subunit, membrane protein NIN90_RS04305 PF01228 Glycine radical NIN90_RS04305 PF02901 Pyruvate formate lyase-like NIN90_RS04315 PF00271 Helicase conserved C-terminal domain NIN90_RS04315 PF17757 UvrB interaction domain NIN90_RS04315 PF12344 Ultra-violet resistance protein B NIN90_RS04315 PF04851 Type III restriction enzyme, res subunit NIN90_RS04315 PF02151 UvrB/uvrC motif NIN90_RS04320 PF02954 Bacterial regulatory protein, Fis family NIN90_RS04320 PF00072 Response regulator receiver domain NIN90_RS04320 PF00158 Sigma-54 interaction domain NIN90_RS04325 PF01627 Hpt domain NIN90_RS04330 PF01933 Uncharacterised protein family UPF0052 NIN90_RS04335 PF06463 Molybdenum Cofactor Synthesis C NIN90_RS04335 PF04055 Radical SAM superfamily NIN90_RS04340 PF00994 Probable molybdopterin binding domain NIN90_RS04345 PF01967 MoaC family NIN90_RS04350 PF02597 ThiS family NIN90_RS04355 PF02391 MoaE protein NIN90_RS04360 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS04360 PF08448 PAS fold NIN90_RS04365 PF00571 CBS domain NIN90_RS04365 PF01368 DHH family NIN90_RS04365 PF02272 DHHA1 domain NIN90_RS04365 PF01743 Poly A polymerase head domain NIN90_RS04370 PF00403 Heavy-metal-associated domain NIN90_RS04375 PF01048 Phosphorylase superfamily NIN90_RS04385 PF09334 tRNA synthetases class I (M) NIN90_RS04385 PF01588 Putative tRNA binding domain NIN90_RS04390 PF10609 NUBPL iron-transfer P-loop NTPase NIN90_RS04395 PF00485 Phosphoribulokinase / Uridine kinase family NIN90_RS04400 PF05170 AsmA family NIN90_RS04405 PF12557 Cob(I)alamin adenosyltransferase N terminal NIN90_RS04405 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP NIN90_RS04410 PF08447 PAS fold NIN90_RS04410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIN90_RS04410 PF13426 PAS domain NIN90_RS04425 PF01451 Low molecular weight phosphotyrosine protein phosphatase NIN90_RS04430 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) NIN90_RS04435 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) NIN90_RS04445 PF04542 Sigma-70 region 2 NIN90_RS04445 PF08281 Sigma-70, region 4 NIN90_RS04450 PF02803 Thiolase, C-terminal domain NIN90_RS04450 PF00108 Thiolase, N-terminal domain NIN90_RS04455 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NIN90_RS04455 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NIN90_RS04455 PF00378 Enoyl-CoA hydratase/isomerase NIN90_RS04460 PF00881 Nitroreductase family NIN90_RS04465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS04465 PF03466 LysR substrate binding domain NIN90_RS04470 PF00072 Response regulator receiver domain NIN90_RS04475 PF04304 Protein of unknown function (DUF454) NIN90_RS04480 PF00156 Phosphoribosyl transferase domain NIN90_RS04485 PF12169 DNA polymerase III subunits gamma and tau domain III NIN90_RS04485 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding NIN90_RS04485 PF12170 DNA polymerase III tau subunit V interacting with alpha NIN90_RS04490 PF02575 YbaB/EbfC DNA-binding family NIN90_RS04495 PF02132 RecR protein NIN90_RS04495 PF13662 Toprim domain NIN90_RS04500 PF00230 Major intrinsic protein NIN90_RS04505 PF03692 Putative zinc- or iron-chelating domain NIN90_RS04510 PF03692 Putative zinc- or iron-chelating domain NIN90_RS04525 PF13847 Methyltransferase domain NIN90_RS04530 PF01263 Aldose 1-epimerase NIN90_RS04535 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NIN90_RS04535 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NIN90_RS04540 PF01641 SelR domain NIN90_RS04550 PF07023 Protein of unknown function (DUF1315) NIN90_RS04555 PF17763 Glutaminase/Asparaginase C-terminal domain NIN90_RS04555 PF00710 Asparaginase, N-terminal NIN90_RS04560 PF01343 Peptidase family S49 NIN90_RS04565 PF07992 Pyridine nucleotide-disulphide oxidoreductase NIN90_RS04565 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NIN90_RS04570 PF01842 ACT domain NIN90_RS04570 PF00551 Formyl transferase NIN90_RS04580 PF04851 Type III restriction enzyme, res subunit NIN90_RS04580 PF13307 Helicase C-terminal domain NIN90_RS04585 PF00814 Glycoprotease family NIN90_RS04600 PF00561 alpha/beta hydrolase fold NIN90_RS04605 PF00501 AMP-binding enzyme NIN90_RS04605 PF13193 AMP-binding enzyme C-terminal domain NIN90_RS04610 PF01612 3'-5' exonuclease NIN90_RS04610 PF00570 HRDC domain NIN90_RS04620 PF03776 Septum formation topological specificity factor MinE NIN90_RS04625 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NIN90_RS04630 PF03775 Septum formation inhibitor MinC, C-terminal domain NIN90_RS04630 PF05209 Septum formation inhibitor MinC, N-terminal domain NIN90_RS04635 PF05166 YcgL domain NIN90_RS04640 PF13406 Transglycosylase SLT domain NIN90_RS04645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS04645 PF03466 LysR substrate binding domain NIN90_RS04650 PF07670 Nucleoside recognition NIN90_RS04650 PF07662 Na+ dependent nucleoside transporter C-terminus NIN90_RS04650 PF01773 Na+ dependent nucleoside transporter N-terminus NIN90_RS04655 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NIN90_RS04655 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NIN90_RS04670 PF07470 Glycosyl Hydrolase Family 88 NIN90_RS04675 PF01306 LacY proton/sugar symporter NIN90_RS04685 PF12833 Helix-turn-helix domain NIN90_RS04710 PF00970 Oxidoreductase FAD-binding domain NIN90_RS04710 PF00175 Oxidoreductase NAD-binding domain NIN90_RS04730 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS04730 PF03707 Bacterial signalling protein N terminal repeat NIN90_RS04730 PF00563 EAL domain NIN90_RS04740 PF00795 Carbon-nitrogen hydrolase NIN90_RS04740 PF00583 Acetyltransferase (GNAT) family NIN90_RS04750 PF03313 Serine dehydratase alpha chain NIN90_RS04750 PF03315 Serine dehydratase beta chain NIN90_RS04755 PF02696 Uncharacterized ACR, YdiU/UPF0061 family NIN90_RS04760 PF00072 Response regulator receiver domain NIN90_RS04760 PF00486 Transcriptional regulatory protein, C terminal NIN90_RS04765 PF00512 His Kinase A (phospho-acceptor) domain NIN90_RS04765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIN90_RS04765 PF00672 HAMP domain NIN90_RS04770 PF01547 Bacterial extracellular solute-binding protein NIN90_RS04775 PF04151 Bacterial pre-peptidase C-terminal domain NIN90_RS04775 PF00082 Subtilase family NIN90_RS04775 PF05922 Peptidase inhibitor I9 NIN90_RS04780 PF03480 Bacterial extracellular solute-binding protein, family 7 NIN90_RS04785 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component NIN90_RS04790 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NIN90_RS04795 PF02954 Bacterial regulatory protein, Fis family NIN90_RS04795 PF00072 Response regulator receiver domain NIN90_RS04795 PF00158 Sigma-54 interaction domain NIN90_RS04800 PF00512 His Kinase A (phospho-acceptor) domain NIN90_RS04800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIN90_RS04810 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NIN90_RS04810 PF05698 Bacterial trigger factor protein (TF) C-terminus NIN90_RS04810 PF05697 Bacterial trigger factor protein (TF) NIN90_RS04815 PF00574 Clp protease NIN90_RS04820 PF06689 ClpX C4-type zinc finger NIN90_RS04820 PF10431 C-terminal, D2-small domain, of ClpB protein NIN90_RS04820 PF07724 AAA domain (Cdc48 subfamily) NIN90_RS04825 PF02190 ATP-dependent protease La (LON) substrate-binding domain NIN90_RS04825 PF05362 Lon protease (S16) C-terminal proteolytic domain NIN90_RS04825 PF00004 ATPase family associated with various cellular activities (AAA) NIN90_RS04830 PF00216 Bacterial DNA-binding protein NIN90_RS04835 PF13145 PPIC-type PPIASE domain NIN90_RS04845 PF02224 Cytidylate kinase NIN90_RS04850 PF00575 S1 RNA binding domain NIN90_RS04855 PF00216 Bacterial DNA-binding protein NIN90_RS04860 PF06305 Lipopolysaccharide assembly protein A domain NIN90_RS04865 PF18073 Rubredoxin metal binding domain NIN90_RS04870 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NIN90_RS04880 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) NIN90_RS04885 PF00005 ABC transporter NIN90_RS04900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS04900 PF03466 LysR substrate binding domain NIN90_RS04910 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NIN90_RS04910 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NIN90_RS04915 PF01037 Lrp/AsnC ligand binding domain NIN90_RS04920 PF13491 4TM region of DNA translocase FtsK/SpoIIIE NIN90_RS04920 PF17854 FtsK alpha domain NIN90_RS04920 PF09397 Ftsk gamma domain NIN90_RS04920 PF01580 FtsK/SpoIIIE family NIN90_RS04925 PF02600 Disulfide bond formation protein DsbB NIN90_RS04930 PF06450 Bacterial Na+/H+ antiporter B (NhaB) NIN90_RS04935 PF00392 Bacterial regulatory proteins, gntR family NIN90_RS04935 PF07840 FadR C-terminal domain NIN90_RS04945 PF00672 HAMP domain NIN90_RS04945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIN90_RS04950 PF01230 HIT domain NIN90_RS04965 PF13036 Peptidoglycan-synthase activator LpoB NIN90_RS04965 PF08139 Prokaryotic membrane lipoprotein lipid attachment site NIN90_RS04975 PF05728 Uncharacterised protein family (UPF0227) NIN90_RS04980 PF07992 Pyridine nucleotide-disulphide oxidoreductase NIN90_RS04985 PF13302 Acetyltransferase (GNAT) domain NIN90_RS04995 PF02559 CarD-like/TRCF domain NIN90_RS04995 PF00270 DEAD/DEAH box helicase NIN90_RS04995 PF00271 Helicase conserved C-terminal domain NIN90_RS04995 PF03461 TRCF domain NIN90_RS04995 PF17757 UvrB interaction domain NIN90_RS05005 PF12704 MacB-like periplasmic core domain NIN90_RS05005 PF02687 FtsX-like permease family NIN90_RS05010 PF00005 ABC transporter NIN90_RS05015 PF02687 FtsX-like permease family NIN90_RS05015 PF12704 MacB-like periplasmic core domain NIN90_RS05025 PF03772 Competence protein NIN90_RS05025 PF00753 Metallo-beta-lactamase superfamily NIN90_RS05025 PF13567 Domain of unknown function (DUF4131) NIN90_RS05030 PF00005 ABC transporter NIN90_RS05030 PF00664 ABC transporter transmembrane region NIN90_RS05035 PF02606 Tetraacyldisaccharide-1-P 4'-kinase NIN90_RS05040 PF03966 Trm112p-like protein NIN90_RS05045 PF02348 Cytidylyltransferase NIN90_RS05050 PF04293 SpoVR like protein NIN90_RS05055 PF04285 Protein of unknown function (DUF444) NIN90_RS05060 PF06798 PrkA serine protein kinase C-terminal domain NIN90_RS05060 PF08298 PrkA AAA domain NIN90_RS05065 PF06629 MltA-interacting protein MipA NIN90_RS05070 PF03887 YfbU domain NIN90_RS05080 PF04055 Radical SAM superfamily NIN90_RS05085 PF00672 HAMP domain NIN90_RS05085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIN90_RS05095 PF01228 Glycine radical NIN90_RS05095 PF02901 Pyruvate formate lyase-like NIN90_RS05105 PF00005 ABC transporter NIN90_RS05110 PF00497 Bacterial extracellular solute-binding proteins, family 3 NIN90_RS05115 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS05120 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS05125 PF03372 Endonuclease/Exonuclease/phosphatase family NIN90_RS05130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIN90_RS05130 PF00672 HAMP domain NIN90_RS05135 PF10689 Protein of unknown function (DUF2496) NIN90_RS05140 PF07445 Primosomal replication protein priC NIN90_RS05145 PF06733 DEAD_2 NIN90_RS05145 PF13307 Helicase C-terminal domain NIN90_RS05150 PF13609 Gram-negative porin NIN90_RS05155 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) NIN90_RS05160 PF02810 SEC-C motif NIN90_RS05165 PF08668 HDOD domain NIN90_RS05165 PF00563 EAL domain NIN90_RS05170 PF00149 Calcineurin-like phosphoesterase NIN90_RS05175 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NIN90_RS05180 PF09190 DALR domain NIN90_RS05180 PF01406 tRNA synthetases class I (C) catalytic domain NIN90_RS05185 PF02075 Crossover junction endodeoxyribonuclease RuvC NIN90_RS05190 PF07499 RuvA, C-terminal domain NIN90_RS05190 PF01330 RuvA N terminal domain NIN90_RS05195 PF05496 Holliday junction DNA helicase RuvB P-loop domain NIN90_RS05195 PF17864 RuvB AAA lid domain NIN90_RS05195 PF05491 RuvB C-terminal winged helix domain NIN90_RS05200 PF01654 Cytochrome bd terminal oxidase subunit I NIN90_RS05205 PF02322 Cytochrome bd terminal oxidase subunit II NIN90_RS05210 PF08173 Membrane bound YbgT-like protein NIN90_RS05220 PF03061 Thioesterase superfamily NIN90_RS05225 PF01618 MotA/TolQ/ExbB proton channel family NIN90_RS05230 PF02472 Biopolymer transport protein ExbD/TolR NIN90_RS05240 PF07676 WD40-like Beta Propeller Repeat NIN90_RS05240 PF04052 TolB amino-terminal domain NIN90_RS05245 PF00691 OmpA family NIN90_RS05250 PF13174 Tetratricopeptide repeat NIN90_RS05250 PF16331 TolA binding protein trimerisation NIN90_RS05255 PF02445 Quinolinate synthetase A protein NIN90_RS05265 PF09308 LuxQ, periplasmic NIN90_RS05265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIN90_RS05265 PF00072 Response regulator receiver domain NIN90_RS05265 PF00512 His Kinase A (phospho-acceptor) domain NIN90_RS05270 PF06610 L-alanine exporter NIN90_RS05290 PF07670 Nucleoside recognition NIN90_RS05295 PF07670 Nucleoside recognition NIN90_RS05300 PF07687 Peptidase dimerisation domain NIN90_RS05300 PF01546 Peptidase family M20/M25/M40 NIN90_RS05305 PF00171 Aldehyde dehydrogenase family NIN90_RS05320 PF00440 Bacterial regulatory proteins, tetR family NIN90_RS05320 PF16295 Tetracyclin repressor-like, C-terminal domain NIN90_RS05325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NIN90_RS05325 PF02770 Acyl-CoA dehydrogenase, middle domain NIN90_RS05325 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NIN90_RS05325 PF09317 Domain of unknown function (DUF1974) NIN90_RS05330 PF12241 Trans-2-enoyl-CoA reductase catalytic region NIN90_RS05330 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase NIN90_RS05330 PF07055 Enoyl reductase FAD binding domain NIN90_RS05335 PF06826 Predicted Permease Membrane Region NIN90_RS05335 PF02080 TrkA-C domain NIN90_RS05340 PF00462 Glutaredoxin NIN90_RS05345 PF00465 Iron-containing alcohol dehydrogenase NIN90_RS05350 PF01418 Helix-turn-helix domain, rpiR family NIN90_RS05350 PF01380 SIS domain NIN90_RS05355 PF00282 Pyridoxal-dependent decarboxylase conserved domain NIN90_RS05365 PF03956 Lysine exporter LysO NIN90_RS05375 PF04994 TfoX C-terminal domain NIN90_RS05375 PF04993 TfoX N-terminal domain NIN90_RS05390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIN90_RS05390 PF00512 His Kinase A (phospho-acceptor) domain NIN90_RS05390 PF00497 Bacterial extracellular solute-binding proteins, family 3 NIN90_RS05400 PF00266 Aminotransferase class-V NIN90_RS05405 PF00890 FAD binding domain NIN90_RS05415 PF12464 Maltose acetyltransferase NIN90_RS05415 PF14602 Hexapeptide repeat of succinyl-transferase NIN90_RS05415 PF00132 Bacterial transferase hexapeptide (six repeats) NIN90_RS05420 PF04616 Glycosyl hydrolases family 43 NIN90_RS05420 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain NIN90_RS05430 PF08497 Radical SAM N-terminal NIN90_RS05430 PF11842 Domain of unknown function (DUF3362) NIN90_RS05430 PF04055 Radical SAM superfamily NIN90_RS05435 PF12848 ABC transporter NIN90_RS05435 PF00005 ABC transporter NIN90_RS05440 PF03358 NADPH-dependent FMN reductase NIN90_RS05445 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NIN90_RS05450 PF07992 Pyridine nucleotide-disulphide oxidoreductase NIN90_RS05450 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NIN90_RS05455 PF00106 short chain dehydrogenase NIN90_RS05465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS05465 PF03466 LysR substrate binding domain NIN90_RS05475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIN90_RS05475 PF00672 HAMP domain NIN90_RS05475 PF12729 Four helix bundle sensory module for signal transduction NIN90_RS05480 PF00196 Bacterial regulatory proteins, luxR family NIN90_RS05480 PF00563 EAL domain NIN90_RS05495 PF00675 Insulinase (Peptidase family M16) NIN90_RS05495 PF05193 Peptidase M16 inactive domain NIN90_RS05510 PF03466 LysR substrate binding domain NIN90_RS05510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS05515 PF06406 StbA protein NIN90_RS05525 PF01312 FlhB HrpN YscU SpaS Family NIN90_RS05530 PF01311 Bacterial export proteins, family 1 NIN90_RS05535 PF01313 Bacterial export proteins, family 3 NIN90_RS05540 PF00813 FliP family NIN90_RS05545 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NIN90_RS05555 PF00460 Flagella basal body rod protein NIN90_RS05560 PF00460 Flagella basal body rod protein NIN90_RS05560 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NIN90_RS05565 PF13861 FlgD Tudor-like domain NIN90_RS05565 PF03963 Flagellar hook capping protein - N-terminal region NIN90_RS05565 PF13860 FlgD Ig-like domain NIN90_RS05570 PF07559 Flagellar basal body protein FlaE NIN90_RS05570 PF00460 Flagella basal body rod protein NIN90_RS05570 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NIN90_RS05575 PF00460 Flagella basal body rod protein NIN90_RS05575 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NIN90_RS05580 PF00460 Flagella basal body rod protein NIN90_RS05580 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NIN90_RS05585 PF02107 Flagellar L-ring protein NIN90_RS05590 PF02119 Flagellar P-ring protein NIN90_RS05615 PF02049 Flagellar hook-basal body complex protein FliE NIN90_RS05620 PF08345 Flagellar M-ring protein C-terminal NIN90_RS05620 PF01514 Secretory protein of YscJ/FliF family NIN90_RS05625 PF14842 FliG N-terminal domain NIN90_RS05625 PF14841 FliG middle domain NIN90_RS05625 PF01706 FliG C-terminal domain NIN90_RS05650 PF00771 FHIPEP family NIN90_RS05655 PF00669 Bacterial flagellin N-terminal helical region NIN90_RS05655 PF00700 Bacterial flagellin C-terminal helical region NIN90_RS05660 PF00669 Bacterial flagellin N-terminal helical region NIN90_RS05660 PF00700 Bacterial flagellin C-terminal helical region NIN90_RS05665 PF00669 Bacterial flagellin N-terminal helical region NIN90_RS05665 PF00700 Bacterial flagellin C-terminal helical region NIN90_RS05670 PF07196 Flagellin hook IN motif NIN90_RS05670 PF07195 Flagellar hook-associated protein 2 C-terminus NIN90_RS05670 PF02465 Flagellar hook-associated protein 2 N-terminus NIN90_RS05695 PF04542 Sigma-70 region 2 NIN90_RS05695 PF04545 Sigma-70, region 4 NIN90_RS05695 PF04539 Sigma-70 region 3 NIN90_RS05700 PF01618 MotA/TolQ/ExbB proton channel family NIN90_RS05705 PF00691 OmpA family NIN90_RS05705 PF13677 Membrane MotB of proton-channel complex MotA/MotB NIN90_RS05715 PF01717 Cobalamin-independent synthase, Catalytic domain NIN90_RS05715 PF08267 Cobalamin-independent synthase, N-terminal domain NIN90_RS05720 PF02743 Cache domain NIN90_RS05720 PF00672 HAMP domain NIN90_RS05720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIN90_RS05730 PF03795 YCII-related domain NIN90_RS05735 PF03061 Thioesterase superfamily NIN90_RS05740 PF04279 Intracellular septation protein A NIN90_RS05745 PF00375 Sodium:dicarboxylate symporter family NIN90_RS05750 PF00290 Tryptophan synthase alpha chain NIN90_RS05755 PF00291 Pyridoxal-phosphate dependent enzyme NIN90_RS05760 PF00218 Indole-3-glycerol phosphate synthase NIN90_RS05760 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase NIN90_RS05765 PF02885 Glycosyl transferase family, helical bundle domain NIN90_RS05765 PF00591 Glycosyl transferase family, a/b domain NIN90_RS05770 PF00117 Glutamine amidotransferase class-I NIN90_RS05775 PF04715 Anthranilate synthase component I, N terminal region NIN90_RS05775 PF00425 chorismate binding enzyme NIN90_RS05785 PF02811 PHP domain NIN90_RS05790 PF02685 Glucokinase NIN90_RS05790 PF01418 Helix-turn-helix domain, rpiR family NIN90_RS05790 PF01380 SIS domain NIN90_RS05800 PF07969 Amidohydrolase family NIN90_RS05810 PF00474 Sodium:solute symporter family NIN90_RS05815 PF00294 pfkB family carbohydrate kinase NIN90_RS05820 PF01081 KDPG and KHG aldolase NIN90_RS05825 PF00728 Glycosyl hydrolase family 20, catalytic domain NIN90_RS05825 PF02838 Glycosyl hydrolase family 20, domain 2 NIN90_RS05830 PF01300 Telomere recombination NIN90_RS05835 PF00849 RNA pseudouridylate synthase NIN90_RS05835 PF01479 S4 domain NIN90_RS05845 PF02463 RecF/RecN/SMC N terminal domain NIN90_RS05850 PF00664 ABC transporter transmembrane region NIN90_RS05850 PF00005 ABC transporter NIN90_RS05855 PF00664 ABC transporter transmembrane region NIN90_RS05855 PF00005 ABC transporter NIN90_RS05860 PF07992 Pyridine nucleotide-disulphide oxidoreductase NIN90_RS05880 PF00266 Aminotransferase class-V NIN90_RS05890 PF02698 DUF218 domain NIN90_RS05900 PF00376 MerR family regulatory protein NIN90_RS05900 PF09278 MerR, DNA binding NIN90_RS05910 PF13344 Haloacid dehalogenase-like hydrolase NIN90_RS05910 PF00293 NUDIX domain NIN90_RS05915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS05915 PF03466 LysR substrate binding domain NIN90_RS05925 PF00390 Malic enzyme, N-terminal domain NIN90_RS05925 PF03949 Malic enzyme, NAD binding domain NIN90_RS05930 PF08482 ATP-dependent helicase C-terminal NIN90_RS05930 PF00271 Helicase conserved C-terminal domain NIN90_RS05930 PF00270 DEAD/DEAH box helicase NIN90_RS05930 PF04408 Helicase associated domain (HA2) NIN90_RS05945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS05945 PF03466 LysR substrate binding domain NIN90_RS05950 PF07690 Major Facilitator Superfamily NIN90_RS05955 PF13533 Biotin-lipoyl like NIN90_RS05960 PF03553 Na+/H+ antiporter family NIN90_RS05965 PF00120 Glutamine synthetase, catalytic domain NIN90_RS05970 PF07722 Peptidase C26 NIN90_RS05975 PF07883 Cupin domain NIN90_RS05975 PF01381 Helix-turn-helix NIN90_RS05980 PF00171 Aldehyde dehydrogenase family NIN90_RS05985 PF01266 FAD dependent oxidoreductase NIN90_RS05990 PF00795 Carbon-nitrogen hydrolase NIN90_RS05995 PF04371 Porphyromonas-type peptidyl-arginine deiminase NIN90_RS06000 PF00171 Aldehyde dehydrogenase family NIN90_RS06005 PF00202 Aminotransferase class-III NIN90_RS06010 PF01259 SAICAR synthetase NIN90_RS06030 PF13488 Glycine zipper NIN90_RS06030 PF00691 OmpA family NIN90_RS06045 PF02913 FAD linked oxidases, C-terminal domain NIN90_RS06045 PF01565 FAD binding domain NIN90_RS06045 PF13183 4Fe-4S dicluster domain NIN90_RS06050 PF04191 Phospholipid methyltransferase NIN90_RS06065 PF00221 Aromatic amino acid lyase NIN90_RS06070 PF01175 Urocanase Rossmann-like domain NIN90_RS06070 PF17392 Urocanase C-terminal domain NIN90_RS06070 PF17391 Urocanase N-terminal domain NIN90_RS06075 PF00491 Arginase family NIN90_RS06080 PF01979 Amidohydrolase family NIN90_RS06085 PF00392 Bacterial regulatory proteins, gntR family NIN90_RS06085 PF07702 UTRA domain NIN90_RS06090 PF04266 ASCH domain NIN90_RS06095 PF04269 Protein of unknown function, DUF440 NIN90_RS06100 PF01132 Elongation factor P (EF-P) OB domain NIN90_RS06100 PF08207 Elongation factor P (EF-P) KOW-like domain NIN90_RS06100 PF09285 Elongation factor P, C-terminal NIN90_RS06110 PF00136 DNA polymerase family B NIN90_RS06110 PF03104 DNA polymerase family B, exonuclease domain NIN90_RS06115 PF00072 Response regulator receiver domain NIN90_RS06115 PF00196 Bacterial regulatory proteins, luxR family NIN90_RS06120 PF01541 GIY-YIG catalytic domain NIN90_RS06120 PF02151 UvrB/uvrC motif NIN90_RS06120 PF08459 UvrC Helix-hairpin-helix N-terminal NIN90_RS06125 PF01066 CDP-alcohol phosphatidyltransferase NIN90_RS06150 PF07995 Glucose / Sorbosone dehydrogenase NIN90_RS06155 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS06155 PF00072 Response regulator receiver domain NIN90_RS06160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS06160 PF03466 LysR substrate binding domain NIN90_RS06170 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NIN90_RS06170 PF01409 tRNA synthetases class II core domain (F) NIN90_RS06175 PF03147 Ferredoxin-fold anticodon binding domain NIN90_RS06175 PF01588 Putative tRNA binding domain NIN90_RS06175 PF03483 B3/4 domain NIN90_RS06175 PF03484 tRNA synthetase B5 domain NIN90_RS06175 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NIN90_RS06180 PF00216 Bacterial DNA-binding protein NIN90_RS06185 PF05488 PAAR motif NIN90_RS06190 PF05724 Thiopurine S-methyltransferase (TPMT) NIN90_RS06195 PF13426 PAS domain NIN90_RS06195 PF08447 PAS fold NIN90_RS06195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIN90_RS06200 PF02222 ATP-grasp domain NIN90_RS06220 PF08447 PAS fold NIN90_RS06220 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS06220 PF00563 EAL domain NIN90_RS06220 PF08448 PAS fold NIN90_RS06225 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NIN90_RS06225 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region NIN90_RS06230 PF04172 LrgB-like family NIN90_RS06235 PF03788 LrgA family NIN90_RS06240 PF08411 Exonuclease C-terminal NIN90_RS06240 PF00929 Exonuclease NIN90_RS06265 PF00375 Sodium:dicarboxylate symporter family NIN90_RS06275 PF01613 Flavin reductase like domain NIN90_RS06280 PF02277 Phosphoribosyltransferase NIN90_RS06285 PF02654 Cobalamin-5-phosphate synthase NIN90_RS06290 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase NIN90_RS06300 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family NIN90_RS06305 PF01032 FecCD transport family NIN90_RS06310 PF00005 ABC transporter NIN90_RS06375 PF00437 Type II/IV secretion system protein NIN90_RS06380 PF04972 BON domain NIN90_RS06380 PF00263 Bacterial type II and III secretion system protein NIN90_RS06380 PF13629 Pilus formation protein N terminal region NIN90_RS06425 PF00356 Bacterial regulatory proteins, lacI family NIN90_RS06430 PF00005 ABC transporter NIN90_RS06430 PF17912 MalK OB fold domain NIN90_RS06435 PF13416 Bacterial extracellular solute-binding protein NIN90_RS06440 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS06445 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS06450 PF07745 Glycosyl hydrolase family 53 NIN90_RS06455 PF08532 Beta-galactosidase trimerisation domain NIN90_RS06455 PF08533 Beta-galactosidase C-terminal domain NIN90_RS06455 PF02449 Beta-galactosidase NIN90_RS06460 PF02264 LamB porin NIN90_RS06470 PF12464 Maltose acetyltransferase NIN90_RS06470 PF00132 Bacterial transferase hexapeptide (six repeats) NIN90_RS06495 PF03466 LysR substrate binding domain NIN90_RS06495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS06505 PF01863 Protein of unknown function DUF45 NIN90_RS06510 PF05971 RNA methyltransferase NIN90_RS06525 PF04204 Homoserine O-succinyltransferase NIN90_RS06545 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NIN90_RS06560 PF17203 Single cache domain 3 NIN90_RS06560 PF00989 PAS fold NIN90_RS06560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIN90_RS06560 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NIN90_RS06565 PF00072 Response regulator receiver domain NIN90_RS06565 PF12431 Transcriptional regulator NIN90_RS06575 PF01584 CheW-like domain NIN90_RS06575 PF00072 Response regulator receiver domain NIN90_RS06585 PF12390 Selenocysteine synthase N terminal NIN90_RS06585 PF03841 L-seryl-tRNA selenium transferase NIN90_RS06590 PF09106 Elongation factor SelB, winged helix NIN90_RS06590 PF09105 Elongation factor SelB, winged helix NIN90_RS06590 PF00009 Elongation factor Tu GTP binding domain NIN90_RS06590 PF03144 Elongation factor Tu domain 2 NIN90_RS06590 PF09107 Elongation factor SelB, winged helix NIN90_RS06595 PF00037 4Fe-4S binding domain NIN90_RS06595 PF12798 4Fe-4S binding domain NIN90_RS06600 PF00361 Proton-conducting membrane transporter NIN90_RS06605 PF00146 NADH dehydrogenase NIN90_RS06610 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NIN90_RS06610 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NIN90_RS06610 PF00374 Nickel-dependent hydrogenase NIN90_RS06615 PF12838 4Fe-4S dicluster domain NIN90_RS06620 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NIN90_RS06625 PF07450 Formate hydrogenlyase maturation protein HycH NIN90_RS06630 PF01750 Hydrogenase maturation protease NIN90_RS06635 PF13247 4Fe-4S dicluster domain NIN90_RS06635 PF12800 4Fe-4S binding domain NIN90_RS06645 PF00158 Sigma-54 interaction domain NIN90_RS06645 PF01590 GAF domain NIN90_RS06650 PF02634 FdhD/NarQ family NIN90_RS06655 PF04955 HupE / UreJ protein NIN90_RS06660 PF17788 HypF Kae1-like domain NIN90_RS06660 PF01300 Telomere recombination NIN90_RS06660 PF07503 HypF finger NIN90_RS06660 PF00708 Acylphosphatase NIN90_RS06665 PF01455 HupF/HypC family NIN90_RS06670 PF01924 Hydrogenase formation hypA family NIN90_RS06675 PF00586 AIR synthase related protein, N-terminal domain NIN90_RS06675 PF02769 AIR synthase related protein, C-terminal domain NIN90_RS06680 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA NIN90_RS06685 PF02492 CobW/HypB/UreG, nucleotide-binding domain NIN90_RS06690 PF02635 DsrE/DsrF-like family NIN90_RS06695 PF00581 Rhodanese-like domain NIN90_RS06700 PF00586 AIR synthase related protein, N-terminal domain NIN90_RS06700 PF02769 AIR synthase related protein, C-terminal domain NIN90_RS06710 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS06710 PF00072 Response regulator receiver domain NIN90_RS06735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIN90_RS06735 PF08447 PAS fold NIN90_RS06735 PF13426 PAS domain NIN90_RS06740 PF01699 Sodium/calcium exchanger protein NIN90_RS06745 PF00924 Mechanosensitive ion channel NIN90_RS06745 PF05552 Conserved TM helix NIN90_RS06760 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NIN90_RS06760 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NIN90_RS06765 PF00072 Response regulator receiver domain NIN90_RS06765 PF00486 Transcriptional regulatory protein, C terminal NIN90_RS06770 PF00672 HAMP domain NIN90_RS06770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIN90_RS06770 PF00512 His Kinase A (phospho-acceptor) domain NIN90_RS06775 PF00141 Peroxidase NIN90_RS06790 PF02975 Methylamine dehydrogenase, L chain NIN90_RS06795 PF00578 AhpC/TSA family NIN90_RS06805 PF06433 Methylamine dehydrogenase heavy chain (MADH) NIN90_RS06810 PF10672 S-adenosylmethionine-dependent methyltransferase NIN90_RS06810 PF17785 PUA-like domain NIN90_RS06815 PF00708 Acylphosphatase NIN90_RS06820 PF04358 DsrC like protein NIN90_RS06825 PF01027 Inhibitor of apoptosis-promoting Bax1 NIN90_RS06830 PF00005 ABC transporter NIN90_RS06835 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS06840 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS06845 PF00497 Bacterial extracellular solute-binding proteins, family 3 NIN90_RS06850 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NIN90_RS06850 PF10414 Sirohaem synthase dimerisation region NIN90_RS06850 PF14824 Sirohaem biosynthesis protein central NIN90_RS06860 PF04055 Radical SAM superfamily NIN90_RS06865 PF06508 Queuosine biosynthesis protein QueC NIN90_RS06870 PF03264 NapC/NirT cytochrome c family, N-terminal region NIN90_RS06875 PF18364 Molybdopterin oxidoreductase N-terminal domain NIN90_RS06875 PF00384 Molybdopterin oxidoreductase NIN90_RS06875 PF01568 Molydopterin dinucleotide binding domain NIN90_RS06885 PF07859 alpha/beta hydrolase fold NIN90_RS06890 PF13417 Glutathione S-transferase, N-terminal domain NIN90_RS06890 PF04399 Glutaredoxin 2, C terminal domain NIN90_RS06905 PF00563 EAL domain NIN90_RS06905 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS06905 PF03707 Bacterial signalling protein N terminal repeat NIN90_RS06915 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS06920 PF00012 Hsp70 protein NIN90_RS06925 PF00012 Hsp70 protein NIN90_RS06935 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS06965 PF02525 Flavodoxin-like fold NIN90_RS06970 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold NIN90_RS06970 PF00271 Helicase conserved C-terminal domain NIN90_RS06970 PF04408 Helicase associated domain (HA2) NIN90_RS06970 PF00270 DEAD/DEAH box helicase NIN90_RS06970 PF11898 Domain of unknown function (DUF3418) NIN90_RS06980 PF01494 FAD binding domain NIN90_RS06985 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NIN90_RS06990 PF12697 Alpha/beta hydrolase family NIN90_RS06995 PF01557 Fumarylacetoacetate (FAA) hydrolase family NIN90_RS07000 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation NIN90_RS07000 PF01118 Semialdehyde dehydrogenase, NAD binding domain NIN90_RS07005 PF00682 HMGL-like NIN90_RS07005 PF07836 DmpG-like communication domain NIN90_RS07010 PF00083 Sugar (and other) transporter NIN90_RS07015 PF07992 Pyridine nucleotide-disulphide oxidoreductase NIN90_RS07015 PF14759 Reductase C-terminal NIN90_RS07020 PF00106 short chain dehydrogenase NIN90_RS07025 PF00355 Rieske [2Fe-2S] domain NIN90_RS07030 PF00866 Ring hydroxylating beta subunit NIN90_RS07035 PF00355 Rieske [2Fe-2S] domain NIN90_RS07035 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NIN90_RS07040 PF03466 LysR substrate binding domain NIN90_RS07040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS07045 PF01614 Bacterial transcriptional regulator NIN90_RS07045 PF09339 IclR helix-turn-helix domain NIN90_RS07065 PF01032 FecCD transport family NIN90_RS07070 PF01032 FecCD transport family NIN90_RS07075 PF00005 ABC transporter NIN90_RS07080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS07080 PF03466 LysR substrate binding domain NIN90_RS07085 PF00593 TonB dependent receptor NIN90_RS07085 PF07715 TonB-dependent Receptor Plug Domain NIN90_RS07090 PF02074 Carboxypeptidase Taq (M32) metallopeptidase NIN90_RS07095 PF05638 Type VI secretion system effector, Hcp NIN90_RS07100 PF16671 Actin cross-linking domain NIN90_RS07100 PF04717 Type VI secretion system, phage-baseplate injector NIN90_RS07125 PF01235 Sodium:alanine symporter family NIN90_RS07140 PF01641 SelR domain NIN90_RS07145 PF04461 Protein of unknown function (DUF520) NIN90_RS07150 PF00793 DAHP synthetase I family NIN90_RS07155 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NIN90_RS07155 PF02896 PEP-utilising enzyme, TIM barrel domain NIN90_RS07155 PF00391 PEP-utilising enzyme, mobile domain NIN90_RS07170 PF17783 CvfB-like winged helix domain NIN90_RS07170 PF13509 S1 domain NIN90_RS07175 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF NIN90_RS07175 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF NIN90_RS07175 PF01189 16S rRNA methyltransferase RsmB/F NIN90_RS07180 PF02470 MlaD protein NIN90_RS07185 PF04403 Paraquat-inducible protein A NIN90_RS07190 PF00005 ABC transporter NIN90_RS07190 PF00664 ABC transporter transmembrane region NIN90_RS07195 PF13185 GAF domain NIN90_RS07200 PF04352 ProQ/FINO family NIN90_RS07200 PF17516 ProQ C-terminal domain NIN90_RS07205 PF17804 Tail specific protease N-terminal domain NIN90_RS07205 PF00595 PDZ domain NIN90_RS07205 PF11818 C-terminal domain of tail specific protease (DUF3340) NIN90_RS07205 PF03572 Peptidase family S41 NIN90_RS07225 PF07508 Recombinase NIN90_RS07225 PF13408 Recombinase zinc beta ribbon domain NIN90_RS07225 PF00239 Resolvase, N terminal domain NIN90_RS07270 PF01367 5'-3' exonuclease, C-terminal SAM fold NIN90_RS07270 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NIN90_RS07270 PF00476 DNA polymerase family A NIN90_RS07270 PF01612 3'-5' exonuclease NIN90_RS07305 PF01712 Deoxynucleoside kinase NIN90_RS07380 PF04860 Phage portal protein NIN90_RS07500 PF08222 CodY helix-turn-helix domain NIN90_RS07500 PF06018 CodY GAF-like domain NIN90_RS07510 PF01433 Peptidase family M1 domain NIN90_RS07510 PF11940 Domain of unknown function (DUF3458) Ig-like fold NIN90_RS07510 PF17432 Domain of unknown function (DUF3458_C) ARM repeats NIN90_RS07520 PF05088 Bacterial NAD-glutamate dehydrogenase NIN90_RS07525 PF01180 Dihydroorotate dehydrogenase NIN90_RS07530 PF07126 Cell-division protein ZapC NIN90_RS07535 PF10672 S-adenosylmethionine-dependent methyltransferase NIN90_RS07535 PF02926 THUMP domain NIN90_RS07535 PF01170 Putative RNA methylase family UPF0020 NIN90_RS07545 PF12848 ABC transporter NIN90_RS07545 PF00005 ABC transporter NIN90_RS07545 PF16326 ABC transporter C-terminal domain NIN90_RS07555 PF04957 Ribosome modulation factor NIN90_RS07560 PF07977 FabA-like domain NIN90_RS07565 PF05362 Lon protease (S16) C-terminal proteolytic domain NIN90_RS07565 PF13654 AAA domain NIN90_RS07570 PF06303 MatP N-terminal domain NIN90_RS07570 PF17414 MatP C-terminal ribbon-helix-helix domain NIN90_RS07585 PF01566 Natural resistance-associated macrophage protein NIN90_RS07590 PF00512 His Kinase A (phospho-acceptor) domain NIN90_RS07590 PF09308 LuxQ, periplasmic NIN90_RS07590 PF00072 Response regulator receiver domain NIN90_RS07590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIN90_RS07605 PF00115 Cytochrome C and Quinol oxidase polypeptide I NIN90_RS07620 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NIN90_RS07620 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP NIN90_RS07630 PF00403 Heavy-metal-associated domain NIN90_RS07645 PF13545 Crp-like helix-turn-helix domain NIN90_RS07645 PF00027 Cyclic nucleotide-binding domain NIN90_RS07650 PF00582 Universal stress protein family NIN90_RS07655 PF01171 PP-loop family NIN90_RS07675 PF08402 TOBE domain NIN90_RS07675 PF00005 ABC transporter NIN90_RS07680 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS07685 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS07690 PF13416 Bacterial extracellular solute-binding protein NIN90_RS07695 PF13416 Bacterial extracellular solute-binding protein NIN90_RS07700 PF02146 Sir2 family NIN90_RS07705 PF00909 Ammonium Transporter Family NIN90_RS07720 PF13247 4Fe-4S dicluster domain NIN90_RS07725 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NIN90_RS07725 PF01568 Molydopterin dinucleotide binding domain NIN90_RS07725 PF00384 Molybdopterin oxidoreductase NIN90_RS07725 PF12838 4Fe-4S dicluster domain NIN90_RS07725 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NIN90_RS07735 PF02613 Nitrate reductase delta subunit NIN90_RS07755 PF02634 FdhD/NarQ family NIN90_RS07770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIN90_RS07770 PF00989 PAS fold NIN90_RS07770 PF00512 His Kinase A (phospho-acceptor) domain NIN90_RS07775 PF00158 Sigma-54 interaction domain NIN90_RS07775 PF02954 Bacterial regulatory protein, Fis family NIN90_RS07775 PF00072 Response regulator receiver domain NIN90_RS07780 PF12849 PBP superfamily domain NIN90_RS07785 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS07790 PF00005 ABC transporter NIN90_RS07790 PF08402 TOBE domain NIN90_RS07795 PF12804 MobA-like NTP transferase domain NIN90_RS07800 PF03453 MoeA N-terminal region (domain I and II) NIN90_RS07800 PF00994 Probable molybdopterin binding domain NIN90_RS07800 PF03454 MoeA C-terminal region (domain IV) NIN90_RS07810 PF00480 ROK family NIN90_RS07815 PF03942 DTW domain NIN90_RS07825 PF12729 Four helix bundle sensory module for signal transduction NIN90_RS07825 PF00672 HAMP domain NIN90_RS07825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIN90_RS07830 PF00877 NlpC/P60 family NIN90_RS07840 PF03881 Fructosamine kinase NIN90_RS07850 PF00677 Lumazine binding domain NIN90_RS07855 PF01554 MatE NIN90_RS07865 PF14743 DNA ligase OB-like domain NIN90_RS07865 PF01068 ATP dependent DNA ligase domain NIN90_RS07870 PF01734 Patatin-like phospholipase NIN90_RS07885 PF03544 Gram-negative bacterial TonB protein C-terminal NIN90_RS07890 PF02472 Biopolymer transport protein ExbD/TolR NIN90_RS07895 PF01618 MotA/TolQ/ExbB proton channel family NIN90_RS07900 PF01618 MotA/TolQ/ExbB proton channel family NIN90_RS07910 PF08212 Lipocalin-like domain NIN90_RS07915 PF00753 Metallo-beta-lactamase superfamily NIN90_RS07920 PF00056 lactate/malate dehydrogenase, NAD binding domain NIN90_RS07920 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NIN90_RS07925 PF13416 Bacterial extracellular solute-binding protein NIN90_RS07930 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS07935 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS07940 PF00005 ABC transporter NIN90_RS07940 PF17912 MalK OB fold domain NIN90_RS07945 PF08220 DeoR-like helix-turn-helix domain NIN90_RS07945 PF00455 DeoR C terminal sensor domain NIN90_RS07955 PF04074 YhcH/YjgK/YiaL NIN90_RS07975 PF02798 Glutathione S-transferase, N-terminal domain NIN90_RS07975 PF14497 Glutathione S-transferase, C-terminal domain NIN90_RS07985 PF04209 homogentisate 1,2-dioxygenase NIN90_RS07990 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NIN90_RS07995 PF12792 CSS motif domain associated with EAL NIN90_RS07995 PF00563 EAL domain NIN90_RS08000 PF07687 Peptidase dimerisation domain NIN90_RS08000 PF01546 Peptidase family M20/M25/M40 NIN90_RS08005 PF00550 Phosphopantetheine attachment site NIN90_RS08005 PF00501 AMP-binding enzyme NIN90_RS08005 PF13193 AMP-binding enzyme C-terminal domain NIN90_RS08005 PF00668 Condensation domain NIN90_RS08020 PF07690 Major Facilitator Superfamily NIN90_RS08025 PF00529 HlyD membrane-fusion protein of T1SS NIN90_RS08025 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NIN90_RS08035 PF13193 AMP-binding enzyme C-terminal domain NIN90_RS08035 PF16177 Acetyl-coenzyme A synthetase N-terminus NIN90_RS08035 PF00501 AMP-binding enzyme NIN90_RS08040 PF04303 PrpF protein NIN90_RS08045 PF00330 Aconitase family (aconitate hydratase) NIN90_RS08045 PF00694 Aconitase C-terminal domain NIN90_RS08050 PF00285 Citrate synthase, C-terminal domain NIN90_RS08065 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NIN90_RS08065 PF02805 Metal binding domain of Ada NIN90_RS08065 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NIN90_RS08065 PF12833 Helix-turn-helix domain NIN90_RS08085 PF01970 Tripartite tricarboxylate transporter TctA family NIN90_RS08095 PF02653 Branched-chain amino acid transport system / permease component NIN90_RS08100 PF00005 ABC transporter NIN90_RS08105 PF13407 Periplasmic binding protein domain NIN90_RS08110 PF02929 Beta galactosidase small chain NIN90_RS08110 PF16353 Domain of unknown function(DUF4981) NIN90_RS08110 PF00703 Glycosyl hydrolases family 2 NIN90_RS08110 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NIN90_RS08110 PF02837 Glycosyl hydrolases family 2, sugar binding domain NIN90_RS08120 PF04400 (Na+)-NQR maturation NqrM NIN90_RS08125 PF00881 Nitroreductase family NIN90_RS08130 PF03992 Antibiotic biosynthesis monooxygenase NIN90_RS08135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS08135 PF03466 LysR substrate binding domain NIN90_RS08140 PF00072 Response regulator receiver domain NIN90_RS08140 PF00158 Sigma-54 interaction domain NIN90_RS08140 PF02954 Bacterial regulatory protein, Fis family NIN90_RS08145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIN90_RS08145 PF00497 Bacterial extracellular solute-binding proteins, family 3 NIN90_RS08145 PF00512 His Kinase A (phospho-acceptor) domain NIN90_RS08150 PF00939 Sodium:sulfate symporter transmembrane region NIN90_RS08155 PF00892 EamA-like transporter family NIN90_RS08170 PF13302 Acetyltransferase (GNAT) domain NIN90_RS08175 PF18024 Helix-turn-helix domain NIN90_RS08175 PF00158 Sigma-54 interaction domain NIN90_RS08180 PF05128 Domain of unknown function (DUF697) NIN90_RS08185 PF04317 YcjX-like family, DUF463 NIN90_RS08200 PF04715 Anthranilate synthase component I, N terminal region NIN90_RS08200 PF00425 chorismate binding enzyme NIN90_RS08205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIN90_RS08205 PF00512 His Kinase A (phospho-acceptor) domain NIN90_RS08205 PF00072 Response regulator receiver domain NIN90_RS08205 PF09308 LuxQ, periplasmic NIN90_RS08215 PF00293 NUDIX domain NIN90_RS08220 PF03222 Tryptophan/tyrosine permease family NIN90_RS08225 PF03313 Serine dehydratase alpha chain NIN90_RS08225 PF03315 Serine dehydratase beta chain NIN90_RS08230 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NIN90_RS08235 PF00005 ABC transporter NIN90_RS08235 PF12704 MacB-like periplasmic core domain NIN90_RS08235 PF02687 FtsX-like permease family NIN90_RS08240 PF02321 Outer membrane efflux protein NIN90_RS08250 PF00561 alpha/beta hydrolase fold NIN90_RS08255 PF01242 6-pyruvoyl tetrahydropterin synthase NIN90_RS08260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIN90_RS08260 PF00672 HAMP domain NIN90_RS08265 PF00152 tRNA synthetases class II (D, K and N) NIN90_RS08265 PF01336 OB-fold nucleic acid binding domain NIN90_RS08280 PF00155 Aminotransferase class I and II NIN90_RS08295 PF00929 Exonuclease NIN90_RS08295 PF02811 PHP domain NIN90_RS08295 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NIN90_RS08295 PF07733 Bacterial DNA polymerase III alpha NTPase domain NIN90_RS08295 PF14579 Helix-hairpin-helix motif NIN90_RS08300 PF00672 HAMP domain NIN90_RS08300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIN90_RS08300 PF02743 Cache domain NIN90_RS08305 PF02028 BCCT, betaine/carnitine/choline family transporter NIN90_RS08310 PF01047 MarR family NIN90_RS08315 PF00072 Response regulator receiver domain NIN90_RS08315 PF00196 Bacterial regulatory proteins, luxR family NIN90_RS08320 PF07730 Histidine kinase NIN90_RS08320 PF17200 Single Cache domain 2 NIN90_RS08325 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NIN90_RS08335 PF03480 Bacterial extracellular solute-binding protein, family 7 NIN90_RS08350 PF00753 Metallo-beta-lactamase superfamily NIN90_RS08355 PF05951 Bacterial protein of unknown function (DUF882) NIN90_RS08360 PF01471 Putative peptidoglycan binding domain NIN90_RS08360 PF03734 L,D-transpeptidase catalytic domain NIN90_RS08385 PF00925 GTP cyclohydrolase II NIN90_RS08395 PF00521 DNA gyrase/topoisomerase IV, subunit A NIN90_RS08395 PF03989 DNA gyrase C-terminal domain, beta-propeller NIN90_RS08405 PF02867 Ribonucleotide reductase, barrel domain NIN90_RS08405 PF03477 ATP cone domain NIN90_RS08405 PF00317 Ribonucleotide reductase, all-alpha domain NIN90_RS08410 PF00268 Ribonucleotide reductase, small chain NIN90_RS08415 PF00970 Oxidoreductase FAD-binding domain NIN90_RS08415 PF00111 2Fe-2S iron-sulfur cluster binding domain NIN90_RS08415 PF00175 Oxidoreductase NAD-binding domain NIN90_RS08425 PF00994 Probable molybdopterin binding domain NIN90_RS08435 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NIN90_RS08435 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NIN90_RS08440 PF01202 Shikimate kinase NIN90_RS08445 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NIN90_RS08455 PF03480 Bacterial extracellular solute-binding protein, family 7 NIN90_RS08465 PF00672 HAMP domain NIN90_RS08465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIN90_RS08465 PF17200 Single Cache domain 2 NIN90_RS08475 PF16653 Saccharopine dehydrogenase C-terminal domain NIN90_RS08475 PF03435 Saccharopine dehydrogenase NADP binding domain NIN90_RS08480 PF00202 Aminotransferase class-III NIN90_RS08490 PF02321 Outer membrane efflux protein NIN90_RS08495 PF00691 OmpA family NIN90_RS08495 PF05736 OprF membrane domain NIN90_RS08500 PF06965 Na+/H+ antiporter 1 NIN90_RS08515 PF00005 ABC transporter NIN90_RS08520 PF01554 MatE NIN90_RS08525 PF11066 Protein of unknown function (DUF2867) NIN90_RS08525 PF13460 NAD(P)H-binding NIN90_RS08535 PF07690 Major Facilitator Superfamily NIN90_RS08540 PF00849 RNA pseudouridylate synthase NIN90_RS08540 PF01479 S4 domain NIN90_RS08545 PF04851 Type III restriction enzyme, res subunit NIN90_RS08545 PF00271 Helicase conserved C-terminal domain NIN90_RS08555 PF00072 Response regulator receiver domain NIN90_RS08555 PF00486 Transcriptional regulatory protein, C terminal NIN90_RS08560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIN90_RS08560 PF00512 His Kinase A (phospho-acceptor) domain NIN90_RS08565 PF01386 Ribosomal L25p family NIN90_RS08570 PF12833 Helix-turn-helix domain NIN90_RS08570 PF10114 Sensory domain found in PocR NIN90_RS08580 PF03466 LysR substrate binding domain NIN90_RS08580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS08585 PF00698 Acyl transferase domain NIN90_RS08590 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG NIN90_RS08595 PF03547 Membrane transport protein NIN90_RS08605 PF01039 Carboxyl transferase domain NIN90_RS08610 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase NIN90_RS08615 PF16957 Malonate decarboxylase, alpha subunit, transporter NIN90_RS08625 PF00583 Acetyltransferase (GNAT) family NIN90_RS08630 PF00390 Malic enzyme, N-terminal domain NIN90_RS08630 PF03949 Malic enzyme, NAD binding domain NIN90_RS08635 PF10397 Adenylosuccinate lyase C-terminus NIN90_RS08635 PF00206 Lyase NIN90_RS08640 PF03606 C4-dicarboxylate anaerobic carrier NIN90_RS08655 PF01418 Helix-turn-helix domain, rpiR family NIN90_RS08655 PF01380 SIS domain NIN90_RS08670 PF00313 'Cold-shock' DNA-binding domain NIN90_RS08680 PF01717 Cobalamin-independent synthase, Catalytic domain NIN90_RS08690 PF03222 Tryptophan/tyrosine permease family NIN90_RS08700 PF00005 ABC transporter NIN90_RS08715 PF06945 Protein of unknown function (DUF1289) NIN90_RS08725 PF13416 Bacterial extracellular solute-binding protein NIN90_RS08730 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS08735 PF00005 ABC transporter NIN90_RS08740 PF01066 CDP-alcohol phosphatidyltransferase NIN90_RS08755 PF00849 RNA pseudouridylate synthase NIN90_RS08760 PF10415 Fumarase C C-terminus NIN90_RS08760 PF00206 Lyase NIN90_RS08765 PF00209 Sodium:neurotransmitter symporter family NIN90_RS08770 PF13091 PLD-like domain NIN90_RS08770 PF13396 Phospholipase_D-nuclease N-terminal NIN90_RS08775 PF01053 Cys/Met metabolism PLP-dependent enzyme NIN90_RS08780 PF03352 Methyladenine glycosylase NIN90_RS08785 PF00873 AcrB/AcrD/AcrF family NIN90_RS08790 PF13533 Biotin-lipoyl like NIN90_RS08795 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NIN90_RS08805 PF06667 Phage shock protein B NIN90_RS08810 PF04012 PspA/IM30 family NIN90_RS08815 PF02954 Bacterial regulatory protein, Fis family NIN90_RS08815 PF00158 Sigma-54 interaction domain NIN90_RS08820 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NIN90_RS08825 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS08830 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS08830 PF12911 N-terminal TM domain of oligopeptide transport permease C NIN90_RS08835 PF00005 ABC transporter NIN90_RS08835 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NIN90_RS08840 PF00005 ABC transporter NIN90_RS08855 PF02833 DHHA2 domain NIN90_RS08855 PF01368 DHH family NIN90_RS08865 PF16874 Glycosyl hydrolase family 36 C-terminal domain NIN90_RS08865 PF16875 Glycosyl hydrolase family 36 N-terminal domain NIN90_RS08875 PF00384 Molybdopterin oxidoreductase NIN90_RS08875 PF18364 Molybdopterin oxidoreductase N-terminal domain NIN90_RS08875 PF01568 Molydopterin dinucleotide binding domain NIN90_RS08880 PF03264 NapC/NirT cytochrome c family, N-terminal region NIN90_RS08885 PF06796 Periplasmic nitrate reductase protein NapE NIN90_RS08890 PF03649 Uncharacterised protein family (UPF0014) NIN90_RS08895 PF01226 Formate/nitrite transporter NIN90_RS08910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS08910 PF03466 LysR substrate binding domain NIN90_RS08915 PF01370 NAD dependent epimerase/dehydratase family NIN90_RS08920 PF02698 DUF218 domain NIN90_RS08925 PF00265 Thymidine kinase NIN90_RS08930 PF02938 GAD domain NIN90_RS08930 PF01336 OB-fold nucleic acid binding domain NIN90_RS08930 PF00152 tRNA synthetases class II (D, K and N) NIN90_RS08935 PF01904 Protein of unknown function DUF72 NIN90_RS08940 PF13649 Methyltransferase domain NIN90_RS08945 PF08003 Protein of unknown function (DUF1698) NIN90_RS08950 PF08443 RimK-like ATP-grasp domain NIN90_RS08950 PF18030 RimK PreATP-grasp domain NIN90_RS08965 PF04310 MukB N-terminal NIN90_RS08965 PF16330 MukB hinge domain NIN90_RS08970 PF04288 MukE-like family NIN90_RS08975 PF17193 MukF C-terminal domain NIN90_RS08975 PF03882 MukF winged-helix domain NIN90_RS08975 PF17192 MukF middle domain NIN90_RS08985 PF02698 DUF218 domain NIN90_RS08990 PF00072 Response regulator receiver domain NIN90_RS08990 PF00486 Transcriptional regulatory protein, C terminal NIN90_RS08995 PF02613 Nitrate reductase delta subunit NIN90_RS09000 PF00356 Bacterial regulatory proteins, lacI family NIN90_RS09005 PF04993 TfoX N-terminal domain NIN90_RS09005 PF04994 TfoX C-terminal domain NIN90_RS09025 PF00534 Glycosyl transferases group 1 NIN90_RS09025 PF08323 Starch synthase catalytic domain NIN90_RS09030 PF00483 Nucleotidyl transferase NIN90_RS09035 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS09035 PF00072 Response regulator receiver domain NIN90_RS09040 PF01131 DNA topoisomerase NIN90_RS09040 PF01751 Toprim domain NIN90_RS09040 PF08272 Topoisomerase I zinc-ribbon-like NIN90_RS09040 PF01396 Topoisomerase DNA binding C4 zinc finger NIN90_RS09045 PF10692 Protein of unknown function (DUF2498) NIN90_RS09050 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NIN90_RS09060 PF03588 Leucyl/phenylalanyl-tRNA protein transferase NIN90_RS09065 PF04376 Arginine-tRNA-protein transferase, N terminus NIN90_RS09065 PF04377 Arginine-tRNA-protein transferase, C terminus NIN90_RS09070 PF01176 Translation initiation factor 1A / IF-1 NIN90_RS09075 PF02861 Clp amino terminal domain, pathogenicity island component NIN90_RS09075 PF17871 AAA lid domain NIN90_RS09075 PF00004 ATPase family associated with various cellular activities (AAA) NIN90_RS09075 PF07724 AAA domain (Cdc48 subfamily) NIN90_RS09075 PF10431 C-terminal, D2-small domain, of ClpB protein NIN90_RS09080 PF02617 ATP-dependent Clp protease adaptor protein ClpS NIN90_RS09085 PF00313 'Cold-shock' DNA-binding domain NIN90_RS09090 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NIN90_RS09090 PF07992 Pyridine nucleotide-disulphide oxidoreductase NIN90_RS09095 PF07690 Major Facilitator Superfamily NIN90_RS09100 PF03551 Transcriptional regulator PadR-like family NIN90_RS09100 PF10400 Virulence activator alpha C-term NIN90_RS09105 PF03971 Monomeric isocitrate dehydrogenase NIN90_RS09110 PF00849 RNA pseudouridylate synthase NIN90_RS09115 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase NIN90_RS09115 PF01502 Phosphoribosyl-AMP cyclohydrolase NIN90_RS09120 PF00977 Histidine biosynthesis protein NIN90_RS09125 PF00977 Histidine biosynthesis protein NIN90_RS09130 PF00117 Glutamine amidotransferase class-I NIN90_RS09135 PF00475 Imidazoleglycerol-phosphate dehydratase NIN90_RS09135 PF08645 Polynucleotide kinase 3 phosphatase NIN90_RS09140 PF00155 Aminotransferase class I and II NIN90_RS09145 PF00815 Histidinol dehydrogenase NIN90_RS09150 PF01634 ATP phosphoribosyltransferase NIN90_RS09150 PF08029 HisG, C-terminal domain NIN90_RS09155 PF00072 Response regulator receiver domain NIN90_RS09155 PF00158 Sigma-54 interaction domain NIN90_RS09160 PF03553 Na+/H+ antiporter family NIN90_RS09165 PF00816 H-NS histone family NIN90_RS09170 PF00294 pfkB family carbohydrate kinase NIN90_RS09180 PF04356 Protein of unknown function (DUF489) NIN90_RS09185 PF00206 Lyase NIN90_RS09185 PF08328 Adenylosuccinate lyase C-terminal NIN90_RS09230 PF01435 Peptidase family M48 NIN90_RS09245 PF08241 Methyltransferase domain NIN90_RS09250 PF00155 Aminotransferase class I and II NIN90_RS09255 PF06968 Biotin and Thiamin Synthesis associated domain NIN90_RS09255 PF04055 Radical SAM superfamily NIN90_RS09260 PF00202 Aminotransferase class-III NIN90_RS09270 PF04324 BFD-like [2Fe-2S] binding domain NIN90_RS09270 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NIN90_RS09270 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NIN90_RS09270 PF07992 Pyridine nucleotide-disulphide oxidoreductase NIN90_RS09270 PF18267 Rubredoxin NAD+ reductase C-terminal domain NIN90_RS09270 PF13806 Rieske-like [2Fe-2S] domain NIN90_RS09275 PF00005 ABC transporter NIN90_RS09280 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS09285 PF00005 ABC transporter NIN90_RS09290 PF00072 Response regulator receiver domain NIN90_RS09290 PF03861 ANTAR domain NIN90_RS09295 PF02885 Glycosyl transferase family, helical bundle domain NIN90_RS09295 PF00591 Glycosyl transferase family, a/b domain NIN90_RS09300 PF10414 Sirohaem synthase dimerisation region NIN90_RS09300 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NIN90_RS09300 PF14824 Sirohaem biosynthesis protein central NIN90_RS09305 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NIN90_RS09305 PF01568 Molydopterin dinucleotide binding domain NIN90_RS09305 PF00384 Molybdopterin oxidoreductase NIN90_RS09305 PF04324 BFD-like [2Fe-2S] binding domain NIN90_RS09315 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NIN90_RS09315 PF02403 Seryl-tRNA synthetase N-terminal domain NIN90_RS09320 PF12002 MgsA AAA+ ATPase C terminal NIN90_RS09320 PF16193 AAA C-terminal domain NIN90_RS09320 PF00004 ATPase family associated with various cellular activities (AAA) NIN90_RS09325 PF03548 Outer membrane lipoprotein carrier protein LolA NIN90_RS09330 PF07517 SecA DEAD-like domain NIN90_RS09330 PF01043 SecA preprotein cross-linking domain NIN90_RS09330 PF02810 SEC-C motif NIN90_RS09330 PF07516 SecA Wing and Scaffold domain NIN90_RS09335 PF07963 Prokaryotic N-terminal methylation motif NIN90_RS09340 PF01207 Dihydrouridine synthase (Dus) NIN90_RS09345 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS09345 PF05230 MASE2 domain NIN90_RS09350 PF00005 ABC transporter NIN90_RS09355 PF02653 Branched-chain amino acid transport system / permease component NIN90_RS09365 PF04217 Protein of unknown function, DUF412 NIN90_RS09370 PF00871 Acetokinase family NIN90_RS09375 PF01515 Phosphate acetyl/butaryl transferase NIN90_RS09375 PF07085 DRTGG domain NIN90_RS09380 PF13194 Domain of unknown function (DUF4010) NIN90_RS09385 PF13409 Glutathione S-transferase, N-terminal domain NIN90_RS09395 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NIN90_RS09395 PF00005 ABC transporter NIN90_RS09400 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NIN90_RS09400 PF00005 ABC transporter NIN90_RS09405 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS09405 PF12911 N-terminal TM domain of oligopeptide transport permease C NIN90_RS09410 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS09415 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NIN90_RS09420 PF04820 Tryptophan halogenase NIN90_RS09440 PF13193 AMP-binding enzyme C-terminal domain NIN90_RS09440 PF00501 AMP-binding enzyme NIN90_RS09440 PF01553 Acyltransferase NIN90_RS09445 PF00550 Phosphopantetheine attachment site NIN90_RS09450 PF00550 Phosphopantetheine attachment site NIN90_RS09470 PF00535 Glycosyl transferase family 2 NIN90_RS09475 PF00221 Aromatic amino acid lyase NIN90_RS09500 PF02801 Beta-ketoacyl synthase, C-terminal domain NIN90_RS09500 PF00109 Beta-ketoacyl synthase, N-terminal domain NIN90_RS09515 PF02801 Beta-ketoacyl synthase, C-terminal domain NIN90_RS09515 PF00109 Beta-ketoacyl synthase, N-terminal domain NIN90_RS09530 PF00294 pfkB family carbohydrate kinase NIN90_RS09535 PF11471 Maltoporin periplasmic N-terminal extension NIN90_RS09535 PF02264 LamB porin NIN90_RS09540 PF00360 Phytochrome region NIN90_RS09540 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS09540 PF01590 GAF domain NIN90_RS09540 PF00563 EAL domain NIN90_RS09545 PF08244 Glycosyl hydrolases family 32 C terminal NIN90_RS09545 PF00251 Glycosyl hydrolases family 32 N-terminal domain NIN90_RS09550 PF00356 Bacterial regulatory proteins, lacI family NIN90_RS09555 PF02378 Phosphotransferase system, EIIC NIN90_RS09555 PF00367 phosphotransferase system, EIIB NIN90_RS09560 PF00512 His Kinase A (phospho-acceptor) domain NIN90_RS09560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIN90_RS09565 PF00486 Transcriptional regulatory protein, C terminal NIN90_RS09565 PF00072 Response regulator receiver domain NIN90_RS09570 PF00593 TonB dependent receptor NIN90_RS09570 PF07715 TonB-dependent Receptor Plug Domain NIN90_RS09575 PF12833 Helix-turn-helix domain NIN90_RS09575 PF06445 GyrI-like small molecule binding domain NIN90_RS09580 PF07690 Major Facilitator Superfamily NIN90_RS09585 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NIN90_RS09585 PF00529 HlyD membrane-fusion protein of T1SS NIN90_RS09590 PF02321 Outer membrane efflux protein NIN90_RS09595 PF00440 Bacterial regulatory proteins, tetR family NIN90_RS09600 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NIN90_RS09605 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS09610 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS09610 PF12911 N-terminal TM domain of oligopeptide transport permease C NIN90_RS09615 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NIN90_RS09615 PF00005 ABC transporter NIN90_RS09620 PF02581 Thiamine monophosphate synthase NIN90_RS09625 PF02678 Pirin NIN90_RS09625 PF17954 Quercetinase C-terminal cupin domain NIN90_RS09630 PF00232 Glycosyl hydrolase family 1 NIN90_RS09635 PF00356 Bacterial regulatory proteins, lacI family NIN90_RS09645 PF00005 ABC transporter NIN90_RS09650 PF00975 Thioesterase domain NIN90_RS09650 PF00550 Phosphopantetheine attachment site NIN90_RS09650 PF00501 AMP-binding enzyme NIN90_RS09650 PF13193 AMP-binding enzyme C-terminal domain NIN90_RS09650 PF00668 Condensation domain NIN90_RS09660 PF07715 TonB-dependent Receptor Plug Domain NIN90_RS09665 PF01032 FecCD transport family NIN90_RS09670 PF01032 FecCD transport family NIN90_RS09675 PF01497 Periplasmic binding protein NIN90_RS09680 PF00296 Luciferase-like monooxygenase NIN90_RS09685 PF00668 Condensation domain NIN90_RS09685 PF00550 Phosphopantetheine attachment site NIN90_RS09685 PF00501 AMP-binding enzyme NIN90_RS09685 PF13193 AMP-binding enzyme C-terminal domain NIN90_RS09690 PF00501 AMP-binding enzyme NIN90_RS09690 PF00668 Condensation domain NIN90_RS09690 PF08242 Methyltransferase domain NIN90_RS09690 PF00550 Phosphopantetheine attachment site NIN90_RS09695 PF00793 DAHP synthetase I family NIN90_RS09705 PF00425 chorismate binding enzyme NIN90_RS09710 PF00501 AMP-binding enzyme NIN90_RS09710 PF13193 AMP-binding enzyme C-terminal domain NIN90_RS09720 PF00550 Phosphopantetheine attachment site NIN90_RS09720 PF00857 Isochorismatase family NIN90_RS09725 PF07690 Major Facilitator Superfamily NIN90_RS09730 PF02525 Flavodoxin-like fold NIN90_RS09735 PF00999 Sodium/hydrogen exchanger family NIN90_RS09735 PF02254 TrkA-N domain NIN90_RS09745 PF07694 5TMR of 5TMR-LYT NIN90_RS09745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIN90_RS09745 PF06580 Histidine kinase NIN90_RS09750 PF04397 LytTr DNA-binding domain NIN90_RS09750 PF00072 Response regulator receiver domain NIN90_RS09755 PF07690 Major Facilitator Superfamily NIN90_RS09780 PF02322 Cytochrome bd terminal oxidase subunit II NIN90_RS09785 PF01654 Cytochrome bd terminal oxidase subunit I NIN90_RS09790 PF00155 Aminotransferase class I and II NIN90_RS09790 PF00392 Bacterial regulatory proteins, gntR family NIN90_RS09795 PF00563 EAL domain NIN90_RS09795 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS09795 PF03707 Bacterial signalling protein N terminal repeat NIN90_RS09805 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NIN90_RS09805 PF00384 Molybdopterin oxidoreductase NIN90_RS09805 PF01568 Molydopterin dinucleotide binding domain NIN90_RS09810 PF03916 Polysulphide reductase, NrfD NIN90_RS09815 PF13247 4Fe-4S dicluster domain NIN90_RS09820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIN90_RS09820 PF00512 His Kinase A (phospho-acceptor) domain NIN90_RS09825 PF00072 Response regulator receiver domain NIN90_RS09825 PF00196 Bacterial regulatory proteins, luxR family NIN90_RS09830 PF08019 Phosphoethanolamine transferase EptA/EptB NIN90_RS09830 PF00884 Sulfatase NIN90_RS09835 PF01219 Prokaryotic diacylglycerol kinase NIN90_RS09840 PF00884 Sulfatase NIN90_RS09845 PF00271 Helicase conserved C-terminal domain NIN90_RS09845 PF00270 DEAD/DEAH box helicase NIN90_RS09865 PF11604 Copper binding periplasmic protein CusF NIN90_RS09870 PF00873 AcrB/AcrD/AcrF family NIN90_RS09890 PF12833 Helix-turn-helix domain NIN90_RS09895 PF01161 Phosphatidylethanolamine-binding protein NIN90_RS09905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS09905 PF03466 LysR substrate binding domain NIN90_RS09910 PF00672 HAMP domain NIN90_RS09910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIN90_RS09910 PF12729 Four helix bundle sensory module for signal transduction NIN90_RS09915 PF00232 Glycosyl hydrolase family 1 NIN90_RS09920 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NIN90_RS09920 PF00367 phosphotransferase system, EIIB NIN90_RS09920 PF02378 Phosphotransferase system, EIIC NIN90_RS09925 PF00874 PRD domain NIN90_RS09925 PF03123 CAT RNA binding domain NIN90_RS09930 PF03547 Membrane transport protein NIN90_RS09935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS09935 PF03466 LysR substrate binding domain NIN90_RS09945 PF08448 PAS fold NIN90_RS09945 PF00563 EAL domain NIN90_RS09945 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS09955 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NIN90_RS09960 PF09619 Type III secretion system lipoprotein chaperone (YscW) NIN90_RS09970 PF01037 Lrp/AsnC ligand binding domain NIN90_RS09970 PF13404 AsnC-type helix-turn-helix domain NIN90_RS09975 PF00291 Pyridoxal-phosphate dependent enzyme NIN90_RS09985 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NIN90_RS09985 PF18269 T3SS EscN ATPase C-terminal domain NIN90_RS10000 PF01514 Secretory protein of YscJ/FliF family NIN90_RS10000 PF08345 Flagellar M-ring protein C-terminal NIN90_RS10005 PF02049 Flagellar hook-basal body complex protein FliE NIN90_RS10010 PF02954 Bacterial regulatory protein, Fis family NIN90_RS10010 PF00158 Sigma-54 interaction domain NIN90_RS10010 PF00072 Response regulator receiver domain NIN90_RS10015 PF00691 OmpA family NIN90_RS10015 PF05736 OprF membrane domain NIN90_RS10025 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NIN90_RS10030 PF00813 FliP family NIN90_RS10035 PF01313 Bacterial export proteins, family 3 NIN90_RS10040 PF01311 Bacterial export proteins, family 1 NIN90_RS10045 PF01312 FlhB HrpN YscU SpaS Family NIN90_RS10050 PF00771 FHIPEP family NIN90_RS10060 PF00700 Bacterial flagellin C-terminal helical region NIN90_RS10060 PF00669 Bacterial flagellin N-terminal helical region NIN90_RS10065 PF02465 Flagellar hook-associated protein 2 N-terminus NIN90_RS10065 PF07195 Flagellar hook-associated protein 2 C-terminus NIN90_RS10065 PF07196 Flagellin hook IN motif NIN90_RS10085 PF03748 Flagellar basal body-associated protein FliL NIN90_RS10090 PF04545 Sigma-70, region 4 NIN90_RS10090 PF04542 Sigma-70 region 2 NIN90_RS10095 PF01618 MotA/TolQ/ExbB proton channel family NIN90_RS10100 PF00691 OmpA family NIN90_RS10100 PF13677 Membrane MotB of proton-channel complex MotA/MotB NIN90_RS10110 PF04170 NlpE N-terminal domain NIN90_RS10140 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NIN90_RS10150 PF03480 Bacterial extracellular solute-binding protein, family 7 NIN90_RS10155 PF04962 KduI/IolB family NIN90_RS10185 PF00460 Flagella basal body rod protein NIN90_RS10185 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NIN90_RS10190 PF10135 Rod binding protein NIN90_RS10190 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase NIN90_RS10195 PF02119 Flagellar P-ring protein NIN90_RS10200 PF02107 Flagellar L-ring protein NIN90_RS10205 PF00460 Flagella basal body rod protein NIN90_RS10205 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NIN90_RS10210 PF00460 Flagella basal body rod protein NIN90_RS10210 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NIN90_RS10215 PF07559 Flagellar basal body protein FlaE NIN90_RS10215 PF00460 Flagella basal body rod protein NIN90_RS10215 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NIN90_RS10220 PF03963 Flagellar hook capping protein - N-terminal region NIN90_RS10220 PF13861 FlgD Tudor-like domain NIN90_RS10220 PF13860 FlgD Ig-like domain NIN90_RS10225 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NIN90_RS10225 PF00460 Flagella basal body rod protein NIN90_RS10230 PF00460 Flagella basal body rod protein NIN90_RS10250 PF01476 LysM domain NIN90_RS10250 PF01464 Transglycosylase SLT domain NIN90_RS10255 PF06445 GyrI-like small molecule binding domain NIN90_RS10275 PF07690 Major Facilitator Superfamily NIN90_RS10280 PF03601 Conserved hypothetical protein 698 NIN90_RS10290 PF13193 AMP-binding enzyme C-terminal domain NIN90_RS10290 PF00501 AMP-binding enzyme NIN90_RS10295 PF13378 Enolase C-terminal domain-like NIN90_RS10300 PF00378 Enoyl-CoA hydratase/isomerase NIN90_RS10305 PF12697 Alpha/beta hydrolase family NIN90_RS10310 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NIN90_RS10310 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NIN90_RS10310 PF16582 Middle domain of thiamine pyrophosphate NIN90_RS10315 PF00425 chorismate binding enzyme NIN90_RS10320 PF00155 Aminotransferase class I and II NIN90_RS10330 PF01966 HD domain NIN90_RS10330 PF13286 Phosphohydrolase-associated domain NIN90_RS10350 PF01343 Peptidase family S49 NIN90_RS10350 PF08496 Peptidase family S49 N-terminal NIN90_RS10355 PF00106 short chain dehydrogenase NIN90_RS10370 PF07733 Bacterial DNA polymerase III alpha NTPase domain NIN90_RS10370 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NIN90_RS10370 PF14579 Helix-hairpin-helix motif NIN90_RS10370 PF02811 PHP domain NIN90_RS10370 PF01336 OB-fold nucleic acid binding domain NIN90_RS10375 PF01584 CheW-like domain NIN90_RS10375 PF00072 Response regulator receiver domain NIN90_RS10380 PF00480 ROK family NIN90_RS10385 PF00224 Pyruvate kinase, barrel domain NIN90_RS10385 PF02887 Pyruvate kinase, alpha/beta domain NIN90_RS10390 PF01734 Patatin-like phospholipase NIN90_RS10405 PF00209 Sodium:neurotransmitter symporter family NIN90_RS10420 PF00367 phosphotransferase system, EIIB NIN90_RS10420 PF02378 Phosphotransferase system, EIIC NIN90_RS10430 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NIN90_RS10430 PF00367 phosphotransferase system, EIIB NIN90_RS10430 PF02378 Phosphotransferase system, EIIC NIN90_RS10435 PF01026 TatD related DNase NIN90_RS10440 PF09115 DNA polymerase III, delta subunit, C terminal NIN90_RS10445 PF02223 Thymidylate kinase NIN90_RS10450 PF02618 YceG-like family NIN90_RS10455 PF01063 Amino-transferase class IV NIN90_RS10460 PF00109 Beta-ketoacyl synthase, N-terminal domain NIN90_RS10460 PF02801 Beta-ketoacyl synthase, C-terminal domain NIN90_RS10465 PF00550 Phosphopantetheine attachment site NIN90_RS10475 PF00698 Acyl transferase domain NIN90_RS10480 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NIN90_RS10480 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NIN90_RS10485 PF02504 Fatty acid synthesis protein NIN90_RS10490 PF01783 Ribosomal L32p protein family NIN90_RS10495 PF02620 Large ribosomal RNA subunit accumulation protein YceD NIN90_RS10500 PF02545 Maf-like protein NIN90_RS10505 PF01479 S4 domain NIN90_RS10505 PF00849 RNA pseudouridylate synthase NIN90_RS10510 PF10150 Ribonuclease E/G family NIN90_RS10510 PF12111 Polyribonucleotide phosphorylase C terminal NIN90_RS10510 PF00575 S1 RNA binding domain NIN90_RS10520 PF01740 STAS domain NIN90_RS10520 PF00916 Sulfate permease family NIN90_RS10530 PF00465 Iron-containing alcohol dehydrogenase NIN90_RS10530 PF00171 Aldehyde dehydrogenase family NIN90_RS10535 PF01914 MarC family integral membrane protein NIN90_RS10540 PF00520 Ion transport protein NIN90_RS10540 PF00027 Cyclic nucleotide-binding domain NIN90_RS10545 PF01118 Semialdehyde dehydrogenase, NAD binding domain NIN90_RS10545 PF02774 Semialdehyde dehydrogenase, dimerisation domain NIN90_RS10550 PF03553 Na+/H+ antiporter family NIN90_RS10560 PF04245 37-kD nucleoid-associated bacterial protein NIN90_RS10565 PF07208 Protein of unknown function (DUF1414) NIN90_RS10570 PF11893 Domain of unknown function (DUF3413) NIN90_RS10570 PF00884 Sulfatase NIN90_RS10580 PF03466 LysR substrate binding domain NIN90_RS10580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS10585 PF07690 Major Facilitator Superfamily NIN90_RS10600 PF00529 HlyD membrane-fusion protein of T1SS NIN90_RS10600 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NIN90_RS10605 PF00155 Aminotransferase class I and II NIN90_RS10615 PF00850 Histone deacetylase domain NIN90_RS10625 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NIN90_RS10625 PF01261 Xylose isomerase-like TIM barrel NIN90_RS10630 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NIN90_RS10630 PF08501 Shikimate dehydrogenase substrate binding domain NIN90_RS10630 PF01488 Shikimate / quinate 5-dehydrogenase NIN90_RS10635 PF01970 Tripartite tricarboxylate transporter TctA family NIN90_RS10650 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NIN90_RS10660 PF04909 Amidohydrolase NIN90_RS10665 PF04303 PrpF protein NIN90_RS10670 PF03737 Aldolase/RraA NIN90_RS10675 PF04909 Amidohydrolase NIN90_RS10680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS10680 PF03466 LysR substrate binding domain NIN90_RS10690 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NIN90_RS10695 PF00248 Aldo/keto reductase family NIN90_RS10700 PF03480 Bacterial extracellular solute-binding protein, family 7 NIN90_RS10710 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NIN90_RS10715 PF01494 FAD binding domain NIN90_RS10720 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit NIN90_RS10720 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NIN90_RS10725 PF01610 Transposase NIN90_RS10725 PF13542 Helix-turn-helix domain of transposase family ISL3 NIN90_RS10725 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NIN90_RS10730 PF01131 DNA topoisomerase NIN90_RS10730 PF01751 Toprim domain NIN90_RS10735 PF00462 Glutaredoxin NIN90_RS10740 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NIN90_RS10740 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NIN90_RS10755 PF04333 MlaA lipoprotein NIN90_RS10760 PF03918 Cytochrome C biogenesis protein NIN90_RS10765 PF03918 Cytochrome C biogenesis protein NIN90_RS10770 PF08534 Redoxin NIN90_RS10775 PF01578 Cytochrome C assembly protein NIN90_RS10775 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal NIN90_RS10780 PF03100 CcmE NIN90_RS10785 PF04995 Heme exporter protein D (CcmD) NIN90_RS10790 PF01578 Cytochrome C assembly protein NIN90_RS10795 PF03379 CcmB protein NIN90_RS10800 PF00005 ABC transporter NIN90_RS10810 PF01584 CheW-like domain NIN90_RS10820 PF13614 AAA domain NIN90_RS10825 PF01339 CheB methylesterase NIN90_RS10825 PF00072 Response regulator receiver domain NIN90_RS10830 PF00072 Response regulator receiver domain NIN90_RS10830 PF01584 CheW-like domain NIN90_RS10830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIN90_RS10830 PF02895 Signal transducing histidine kinase, homodimeric domain NIN90_RS10830 PF01627 Hpt domain NIN90_RS10835 PF04344 Chemotaxis phosphatase, CheZ NIN90_RS10840 PF00072 Response regulator receiver domain NIN90_RS10845 PF04542 Sigma-70 region 2 NIN90_RS10845 PF04539 Sigma-70 region 3 NIN90_RS10845 PF04545 Sigma-70, region 4 NIN90_RS10850 PF10609 NUBPL iron-transfer P-loop NTPase NIN90_RS10855 PF00448 SRP54-type protein, GTPase domain NIN90_RS10860 PF00771 FHIPEP family NIN90_RS10865 PF00300 Histidine phosphatase superfamily (branch 1) NIN90_RS10870 PF00675 Insulinase (Peptidase family M16) NIN90_RS10870 PF05193 Peptidase M16 inactive domain NIN90_RS10870 PF16187 Middle or third domain of peptidase_M16 NIN90_RS10875 PF06185 YecM protein NIN90_RS10880 PF03485 Arginyl tRNA synthetase N terminal domain NIN90_RS10880 PF05746 DALR anticodon binding domain NIN90_RS10880 PF00750 tRNA synthetases class I (R) NIN90_RS10895 PF07664 Ferrous iron transport protein B C terminus NIN90_RS10895 PF02421 Ferrous iron transport protein B NIN90_RS10895 PF07670 Nucleoside recognition NIN90_RS10900 PF04023 FeoA domain NIN90_RS10905 PF12833 Helix-turn-helix domain NIN90_RS10910 PF01297 Zinc-uptake complex component A periplasmic NIN90_RS10915 PF00005 ABC transporter NIN90_RS10920 PF00950 ABC 3 transport family NIN90_RS10925 PF02629 CoA binding domain NIN90_RS10925 PF00549 CoA-ligase NIN90_RS10930 PF08442 ATP-grasp domain NIN90_RS10930 PF00549 CoA-ligase NIN90_RS10935 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NIN90_RS10935 PF00364 Biotin-requiring enzyme NIN90_RS10935 PF02817 e3 binding domain NIN90_RS10940 PF16870 2-oxoglutarate dehydrogenase C-terminal NIN90_RS10940 PF16078 2-oxoglutarate dehydrogenase N-terminus NIN90_RS10940 PF00676 Dehydrogenase E1 component NIN90_RS10940 PF02779 Transketolase, pyrimidine binding domain NIN90_RS10945 PF13085 2Fe-2S iron-sulfur cluster binding domain NIN90_RS10950 PF02910 Fumarate reductase flavoprotein C-term NIN90_RS10950 PF00890 FAD binding domain NIN90_RS10955 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NIN90_RS10960 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NIN90_RS10965 PF00285 Citrate synthase, C-terminal domain NIN90_RS10970 PF01784 NIF3 (NGG1p interacting factor 3) NIN90_RS10980 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NIN90_RS10980 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NIN90_RS10980 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NIN90_RS10980 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NIN90_RS10985 PF03925 SeqA protein C-terminal domain NIN90_RS10985 PF17206 SeqA protein N-terminal domain NIN90_RS10990 PF12697 Alpha/beta hydrolase family NIN90_RS11000 PF00258 Flavodoxin NIN90_RS11005 PF04172 LrgB-like family NIN90_RS11010 PF03788 LrgA family NIN90_RS11015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS11015 PF03466 LysR substrate binding domain NIN90_RS11025 PF01475 Ferric uptake regulator family NIN90_RS11030 PF01118 Semialdehyde dehydrogenase, NAD binding domain NIN90_RS11030 PF02774 Semialdehyde dehydrogenase, dimerisation domain NIN90_RS11035 PF11890 Domain of unknown function (DUF3410) NIN90_RS11035 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NIN90_RS11035 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NIN90_RS11040 PF02801 Beta-ketoacyl synthase, C-terminal domain NIN90_RS11040 PF00109 Beta-ketoacyl synthase, N-terminal domain NIN90_RS11045 PF05430 S-adenosyl-L-methionine-dependent methyltransferase NIN90_RS11045 PF01266 FAD dependent oxidoreductase NIN90_RS11055 PF08891 YfcL protein NIN90_RS11060 PF04315 Elongation factor P hydroxylase NIN90_RS11065 PF03458 UPF0126 domain NIN90_RS11070 PF01264 Chorismate synthase NIN90_RS11075 PF05175 Methyltransferase small domain NIN90_RS11080 PF01713 Smr domain NIN90_RS11085 PF01312 FlhB HrpN YscU SpaS Family NIN90_RS11090 PF01311 Bacterial export proteins, family 1 NIN90_RS11095 PF01313 Bacterial export proteins, family 3 NIN90_RS11100 PF00813 FliP family NIN90_RS11105 PF04347 Flagellar biosynthesis protein, FliO NIN90_RS11110 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NIN90_RS11115 PF02154 Flagellar motor switch protein FliM NIN90_RS11115 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NIN90_RS11135 PF18269 T3SS EscN ATPase C-terminal domain NIN90_RS11135 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NIN90_RS11145 PF01706 FliG C-terminal domain NIN90_RS11145 PF14841 FliG middle domain NIN90_RS11145 PF14842 FliG N-terminal domain NIN90_RS11150 PF01514 Secretory protein of YscJ/FliF family NIN90_RS11150 PF08345 Flagellar M-ring protein C-terminal NIN90_RS11155 PF02049 Flagellar hook-basal body complex protein FliE NIN90_RS11160 PF00158 Sigma-54 interaction domain NIN90_RS11160 PF02954 Bacterial regulatory protein, Fis family NIN90_RS11160 PF00072 Response regulator receiver domain NIN90_RS11165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIN90_RS11165 PF13188 PAS domain NIN90_RS11165 PF00512 His Kinase A (phospho-acceptor) domain NIN90_RS11170 PF02954 Bacterial regulatory protein, Fis family NIN90_RS11170 PF06490 Flagellar regulatory protein FleQ NIN90_RS11170 PF00158 Sigma-54 interaction domain NIN90_RS11175 PF02561 Flagellar protein FliS NIN90_RS11185 PF02465 Flagellar hook-associated protein 2 N-terminus NIN90_RS11185 PF07196 Flagellin hook IN motif NIN90_RS11185 PF07195 Flagellar hook-associated protein 2 C-terminus NIN90_RS11190 PF03646 FlaG protein NIN90_RS11195 PF00700 Bacterial flagellin C-terminal helical region NIN90_RS11195 PF07196 Flagellin hook IN motif NIN90_RS11195 PF00669 Bacterial flagellin N-terminal helical region NIN90_RS11200 PF00700 Bacterial flagellin C-terminal helical region NIN90_RS11200 PF00669 Bacterial flagellin N-terminal helical region NIN90_RS11200 PF07196 Flagellin hook IN motif NIN90_RS11205 PF00669 Bacterial flagellin N-terminal helical region NIN90_RS11205 PF07196 Flagellin hook IN motif NIN90_RS11205 PF00700 Bacterial flagellin C-terminal helical region NIN90_RS11210 PF04261 Dyp-type peroxidase family NIN90_RS11215 PF11143 Protein of unknown function (DUF2919) NIN90_RS11225 PF00474 Sodium:solute symporter family NIN90_RS11230 PF00478 IMP dehydrogenase / GMP reductase domain NIN90_RS11230 PF00571 CBS domain NIN90_RS11240 PF00356 Bacterial regulatory proteins, lacI family NIN90_RS11245 PF10509 Galactokinase galactose-binding signature NIN90_RS11245 PF08544 GHMP kinases C terminal NIN90_RS11245 PF00288 GHMP kinases N terminal domain NIN90_RS11250 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain NIN90_RS11250 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain NIN90_RS11255 PF16363 GDP-mannose 4,6 dehydratase NIN90_RS11265 PF03960 ArsC family NIN90_RS11270 PF07687 Peptidase dimerisation domain NIN90_RS11270 PF01546 Peptidase family M20/M25/M40 NIN90_RS11275 PF02557 D-alanyl-D-alanine carboxypeptidase NIN90_RS11285 PF06804 NlpB/DapX lipoprotein NIN90_RS11290 PF00701 Dihydrodipicolinate synthetase family NIN90_RS11295 PF01842 ACT domain NIN90_RS11325 PF00578 AhpC/TSA family NIN90_RS11335 PF13737 Transposase DDE domain NIN90_RS11370 PF02743 Cache domain NIN90_RS11370 PF00672 HAMP domain NIN90_RS11370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIN90_RS11375 PF01594 AI-2E family transporter NIN90_RS11385 PF13181 Tetratricopeptide repeat NIN90_RS11385 PF01435 Peptidase family M48 NIN90_RS11390 PF03960 ArsC family NIN90_RS11395 PF03358 NADPH-dependent FMN reductase NIN90_RS11410 PF00860 Permease family NIN90_RS11415 PF04073 Aminoacyl-tRNA editing domain NIN90_RS11420 PF00149 Calcineurin-like phosphoesterase NIN90_RS11420 PF02872 5'-nucleotidase, C-terminal domain NIN90_RS11425 PF00793 DAHP synthetase I family NIN90_RS11430 PF13369 Transglutaminase-like superfamily NIN90_RS11435 PF04247 Invasion gene expression up-regulator, SirB NIN90_RS11440 PF13847 Methyltransferase domain NIN90_RS11440 PF17827 PrmC N-terminal domain NIN90_RS11445 PF03462 PCRF domain NIN90_RS11445 PF00472 RF-1 domain NIN90_RS11450 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NIN90_RS11450 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NIN90_RS11450 PF01488 Shikimate / quinate 5-dehydrogenase NIN90_RS11455 PF03550 Outer membrane lipoprotein LolB NIN90_RS11460 PF08544 GHMP kinases C terminal NIN90_RS11460 PF00288 GHMP kinases N terminal domain NIN90_RS11465 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NIN90_RS11465 PF14572 Phosphoribosyl synthetase-associated domain NIN90_RS11470 PF01195 Peptidyl-tRNA hydrolase NIN90_RS11475 PF01926 50S ribosome-binding GTPase NIN90_RS11475 PF06071 Protein of unknown function (DUF933) NIN90_RS11565 PF00700 Bacterial flagellin C-terminal helical region NIN90_RS11565 PF07196 Flagellin hook IN motif NIN90_RS11565 PF00669 Bacterial flagellin N-terminal helical region NIN90_RS11570 PF00700 Bacterial flagellin C-terminal helical region NIN90_RS11570 PF07196 Flagellin hook IN motif NIN90_RS11570 PF00669 Bacterial flagellin N-terminal helical region NIN90_RS11575 PF00669 Bacterial flagellin N-terminal helical region NIN90_RS11580 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NIN90_RS11580 PF07196 Flagellin hook IN motif NIN90_RS11585 PF10135 Rod binding protein NIN90_RS11585 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase NIN90_RS11590 PF02119 Flagellar P-ring protein NIN90_RS11595 PF02107 Flagellar L-ring protein NIN90_RS11600 PF00460 Flagella basal body rod protein NIN90_RS11600 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NIN90_RS11605 PF00460 Flagella basal body rod protein NIN90_RS11605 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NIN90_RS11610 PF00460 Flagella basal body rod protein NIN90_RS11610 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NIN90_RS11610 PF07559 Flagellar basal body protein FlaE NIN90_RS11615 PF03963 Flagellar hook capping protein - N-terminal region NIN90_RS11615 PF13860 FlgD Ig-like domain NIN90_RS11615 PF13861 FlgD Tudor-like domain NIN90_RS11620 PF00460 Flagella basal body rod protein NIN90_RS11620 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NIN90_RS11625 PF00460 Flagella basal body rod protein NIN90_RS11630 PF01739 CheR methyltransferase, SAM binding domain NIN90_RS11630 PF03705 CheR methyltransferase, all-alpha domain NIN90_RS11635 PF00072 Response regulator receiver domain NIN90_RS11635 PF01584 CheW-like domain NIN90_RS11645 PF04316 Anti-sigma-28 factor, FlgM NIN90_RS11680 PF01389 OmpA-like transmembrane domain NIN90_RS11680 PF00691 OmpA family NIN90_RS11685 PF00749 tRNA synthetases class I (E and Q), catalytic domain NIN90_RS11690 PF00403 Heavy-metal-associated domain NIN90_RS11700 PF03173 Putative carbohydrate binding domain NIN90_RS11700 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain NIN90_RS11700 PF00728 Glycosyl hydrolase family 20, catalytic domain NIN90_RS11700 PF02838 Glycosyl hydrolase family 20, domain 2 NIN90_RS11725 PF01713 Smr domain NIN90_RS11730 PF00849 RNA pseudouridylate synthase NIN90_RS11730 PF01479 S4 domain NIN90_RS11740 PF00586 AIR synthase related protein, N-terminal domain NIN90_RS11740 PF02769 AIR synthase related protein, C-terminal domain NIN90_RS11745 PF00551 Formyl transferase NIN90_RS11750 PF13230 Glutamine amidotransferases class-II NIN90_RS11755 PF13580 SIS domain NIN90_RS11760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NIN90_RS11760 PF02770 Acyl-CoA dehydrogenase, middle domain NIN90_RS11760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NIN90_RS11760 PF09317 Domain of unknown function (DUF1974) NIN90_RS11770 PF00929 Exonuclease NIN90_RS11775 PF00075 RNase H NIN90_RS11780 PF08241 Methyltransferase domain NIN90_RS11785 PF16123 Hydroxyacylglutathione hydrolase C-terminus NIN90_RS11785 PF00753 Metallo-beta-lactamase superfamily NIN90_RS11790 PF01476 LysM domain NIN90_RS11790 PF01464 Transglycosylase SLT domain NIN90_RS11800 PF03372 Endonuclease/Exonuclease/phosphatase family NIN90_RS11805 PF00543 Nitrogen regulatory protein P-II NIN90_RS11810 PF00034 Cytochrome c NIN90_RS11815 PF01171 PP-loop family NIN90_RS11815 PF09179 TilS substrate binding domain NIN90_RS11815 PF11734 TilS substrate C-terminal domain NIN90_RS11820 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit NIN90_RS11825 PF02811 PHP domain NIN90_RS11825 PF14579 Helix-hairpin-helix motif NIN90_RS11825 PF01336 OB-fold nucleic acid binding domain NIN90_RS11825 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NIN90_RS11825 PF07733 Bacterial DNA polymerase III alpha NTPase domain NIN90_RS11830 PF01351 Ribonuclease HII NIN90_RS11835 PF02684 Lipid-A-disaccharide synthetase NIN90_RS11840 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 NIN90_RS11840 PF00132 Bacterial transferase hexapeptide (six repeats) NIN90_RS11845 PF07977 FabA-like domain NIN90_RS11850 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD NIN90_RS11850 PF00132 Bacterial transferase hexapeptide (six repeats) NIN90_RS11855 PF03938 Outer membrane protein (OmpH-like) NIN90_RS11860 PF07244 Surface antigen variable number repeat NIN90_RS11860 PF01103 Surface antigen NIN90_RS11865 PF17820 PDZ domain NIN90_RS11865 PF02163 Peptidase family M50 NIN90_RS11870 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NIN90_RS11870 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NIN90_RS11870 PF13288 DXP reductoisomerase C-terminal domain NIN90_RS11880 PF01255 Putative undecaprenyl diphosphate synthase NIN90_RS11885 PF01765 Ribosome recycling factor NIN90_RS11890 PF00696 Amino acid kinase family NIN90_RS11895 PF00889 Elongation factor TS NIN90_RS11900 PF00318 Ribosomal protein S2 NIN90_RS11905 PF00557 Metallopeptidase family M24 NIN90_RS11910 PF01966 HD domain NIN90_RS11910 PF08335 GlnD PII-uridylyltransferase NIN90_RS11910 PF01909 Nucleotidyltransferase domain NIN90_RS11915 PF11944 Protein of unknown function (DUF3461) NIN90_RS11920 PF04608 Phosphatidylglycerophosphatase A NIN90_RS11925 PF00586 AIR synthase related protein, N-terminal domain NIN90_RS11925 PF02769 AIR synthase related protein, C-terminal domain NIN90_RS11930 PF01029 NusB family NIN90_RS11935 PF00885 6,7-dimethyl-8-ribityllumazine synthase NIN90_RS11940 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NIN90_RS11940 PF00925 GTP cyclohydrolase II NIN90_RS11945 PF00677 Lumazine binding domain NIN90_RS11950 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NIN90_RS11950 PF01872 RibD C-terminal domain NIN90_RS11955 PF03477 ATP cone domain NIN90_RS11960 PF00171 Aldehyde dehydrogenase family NIN90_RS11965 PF00696 Amino acid kinase family NIN90_RS11965 PF01472 PUA domain NIN90_RS11970 PF07417 Sigma factor-binding transcriptional regulator Crl NIN90_RS11975 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) NIN90_RS11980 PF00156 Phosphoribosyl transferase domain NIN90_RS11985 PF00860 Permease family NIN90_RS11990 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NIN90_RS12000 PF03480 Bacterial extracellular solute-binding protein, family 7 NIN90_RS12005 PF00171 Aldehyde dehydrogenase family NIN90_RS12010 PF00202 Aminotransferase class-III NIN90_RS12015 PF00155 Aminotransferase class I and II NIN90_RS12015 PF00392 Bacterial regulatory proteins, gntR family NIN90_RS12020 PF07687 Peptidase dimerisation domain NIN90_RS12020 PF01546 Peptidase family M20/M25/M40 NIN90_RS12025 PF08443 RimK-like ATP-grasp domain NIN90_RS12025 PF18030 RimK PreATP-grasp domain NIN90_RS12030 PF08443 RimK-like ATP-grasp domain NIN90_RS12030 PF18030 RimK PreATP-grasp domain NIN90_RS12040 PF00209 Sodium:neurotransmitter symporter family NIN90_RS12045 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS12045 PF01590 GAF domain NIN90_RS12045 PF00563 EAL domain NIN90_RS12045 PF00360 Phytochrome region NIN90_RS12055 PF11798 IMS family HHH motif NIN90_RS12055 PF00817 impB/mucB/samB family NIN90_RS12055 PF11799 impB/mucB/samB family C-terminal domain NIN90_RS12070 PF02424 ApbE family NIN90_RS12075 PF00970 Oxidoreductase FAD-binding domain NIN90_RS12075 PF00111 2Fe-2S iron-sulfur cluster binding domain NIN90_RS12075 PF00175 Oxidoreductase NAD-binding domain NIN90_RS12080 PF02508 Rnf-Nqr subunit, membrane protein NIN90_RS12085 PF02508 Rnf-Nqr subunit, membrane protein NIN90_RS12090 PF04205 FMN-binding domain NIN90_RS12095 PF03116 NQR2, RnfD, RnfE family NIN90_RS12100 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) NIN90_RS12100 PF11973 NQRA C-terminal domain NIN90_RS12105 PF01722 BolA-like protein NIN90_RS12110 PF05175 Methyltransferase small domain NIN90_RS12120 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NIN90_RS12125 PF07690 Major Facilitator Superfamily NIN90_RS12130 PF00881 Nitroreductase family NIN90_RS12140 PF01738 Dienelactone hydrolase family NIN90_RS12175 PF01979 Amidohydrolase family NIN90_RS12180 PF09084 NMT1/THI5 like NIN90_RS12185 PF00005 ABC transporter NIN90_RS12190 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS12195 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NIN90_RS12205 PF07724 AAA domain (Cdc48 subfamily) NIN90_RS12205 PF17871 AAA lid domain NIN90_RS12205 PF02861 Clp amino terminal domain, pathogenicity island component NIN90_RS12205 PF10431 C-terminal, D2-small domain, of ClpB protein NIN90_RS12205 PF00004 ATPase family associated with various cellular activities (AAA) NIN90_RS12210 PF02578 Multi-copper polyphenol oxidoreductase laccase NIN90_RS12215 PF01479 S4 domain NIN90_RS12215 PF00849 RNA pseudouridylate synthase NIN90_RS12220 PF13525 Outer membrane lipoprotein NIN90_RS12225 PF01464 Transglycosylase SLT domain NIN90_RS12230 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NIN90_RS12235 PF01817 Chorismate mutase type II NIN90_RS12235 PF00800 Prephenate dehydratase NIN90_RS12240 PF13416 Bacterial extracellular solute-binding protein NIN90_RS12245 PF00563 EAL domain NIN90_RS12245 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS12250 PF01931 Protein of unknown function DUF84 NIN90_RS12255 PF01371 Trp repressor protein NIN90_RS12260 PF01464 Transglycosylase SLT domain NIN90_RS12260 PF14718 Soluble lytic murein transglycosylase L domain NIN90_RS12265 PF00005 ABC transporter NIN90_RS12265 PF12848 ABC transporter NIN90_RS12270 PF07238 PilZ domain NIN90_RS12275 PF01817 Chorismate mutase type II NIN90_RS12275 PF02153 Prephenate dehydrogenase NIN90_RS12280 PF00793 DAHP synthetase I family NIN90_RS12285 PF07694 5TMR of 5TMR-LYT NIN90_RS12285 PF06580 Histidine kinase NIN90_RS12290 PF04397 LytTr DNA-binding domain NIN90_RS12290 PF00072 Response regulator receiver domain NIN90_RS12295 PF00933 Glycosyl hydrolase family 3 N terminal domain NIN90_RS12300 PF03702 Anhydro-N-acetylmuramic acid kinase NIN90_RS12305 PF13580 SIS domain NIN90_RS12310 PF00999 Sodium/hydrogen exchanger family NIN90_RS12320 PF02554 Carbon starvation protein CstA NIN90_RS12325 PF02401 LytB protein NIN90_RS12330 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NIN90_RS12335 PF01252 Signal peptidase (SPase) II NIN90_RS12340 PF00133 tRNA synthetases class I (I, L, M and V) NIN90_RS12340 PF06827 Zinc finger found in FPG and IleRS NIN90_RS12340 PF08264 Anticodon-binding domain of tRNA NIN90_RS12345 PF06574 FAD synthetase NIN90_RS12345 PF01687 Riboflavin kinase NIN90_RS12350 PF03023 Lipid II flippase MurJ NIN90_RS12355 PF01649 Ribosomal protein S20 NIN90_RS12360 PF01022 Bacterial regulatory protein, arsR family NIN90_RS12365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS12365 PF03466 LysR substrate binding domain NIN90_RS12370 PF02690 Na+/Pi-cotransporter NIN90_RS12375 PF00303 Thymidylate synthase NIN90_RS12380 PF01790 Prolipoprotein diacylglyceryl transferase NIN90_RS12385 PF01925 Sulfite exporter TauE/SafE NIN90_RS12390 PF02896 PEP-utilising enzyme, TIM barrel domain NIN90_RS12390 PF00391 PEP-utilising enzyme, mobile domain NIN90_RS12390 PF05524 PEP-utilising enzyme, N-terminal NIN90_RS12390 PF01590 GAF domain NIN90_RS12395 PF00293 NUDIX domain NIN90_RS12400 PF02976 DNA mismatch repair enzyme MutH NIN90_RS12410 PF00248 Aldo/keto reductase family NIN90_RS12420 PF02954 Bacterial regulatory protein, Fis family NIN90_RS12420 PF00072 Response regulator receiver domain NIN90_RS12420 PF00158 Sigma-54 interaction domain NIN90_RS12425 PF00152 tRNA synthetases class II (D, K and N) NIN90_RS12425 PF01336 OB-fold nucleic acid binding domain NIN90_RS12435 PF05525 Branched-chain amino acid transport protein NIN90_RS12440 PF05175 Methyltransferase small domain NIN90_RS12445 PF00270 DEAD/DEAH box helicase NIN90_RS12445 PF00271 Helicase conserved C-terminal domain NIN90_RS12450 PF00009 Elongation factor Tu GTP binding domain NIN90_RS12450 PF03144 Elongation factor Tu domain 2 NIN90_RS12450 PF16658 Class II release factor RF3, C-terminal domain NIN90_RS12455 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS12455 PF03707 Bacterial signalling protein N terminal repeat NIN90_RS12455 PF00563 EAL domain NIN90_RS12470 PF13508 Acetyltransferase (GNAT) domain NIN90_RS12475 PF02036 SCP-2 sterol transfer family NIN90_RS12480 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS12480 PF03707 Bacterial signalling protein N terminal repeat NIN90_RS12480 PF00563 EAL domain NIN90_RS12485 PF01136 Peptidase family U32 NIN90_RS12490 PF01136 Peptidase family U32 NIN90_RS12495 PF01554 MatE NIN90_RS12505 PF07719 Tetratricopeptide repeat NIN90_RS12505 PF13181 Tetratricopeptide repeat NIN90_RS12510 PF01138 3' exoribonuclease family, domain 1 NIN90_RS12510 PF00575 S1 RNA binding domain NIN90_RS12510 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NIN90_RS12510 PF00013 KH domain NIN90_RS12510 PF03725 3' exoribonuclease family, domain 2 NIN90_RS12515 PF00312 Ribosomal protein S15 NIN90_RS12520 PF16198 tRNA pseudouridylate synthase B C-terminal domain NIN90_RS12520 PF01509 TruB family pseudouridylate synthase (N terminal domain) NIN90_RS12520 PF09157 Pseudouridine synthase II TruB, C-terminal NIN90_RS12525 PF02033 Ribosome-binding factor A NIN90_RS12530 PF00009 Elongation factor Tu GTP binding domain NIN90_RS12530 PF11987 Translation-initiation factor 2 NIN90_RS12530 PF08364 Bacterial translation initiation factor IF-2 associated region NIN90_RS12530 PF04760 Translation initiation factor IF-2, N-terminal region NIN90_RS12535 PF08529 NusA N-terminal domain NIN90_RS12535 PF00575 S1 RNA binding domain NIN90_RS12535 PF13184 NusA-like KH domain NIN90_RS12540 PF17384 RimP C-terminal SH3 domain NIN90_RS12540 PF02576 RimP N-terminal domain NIN90_RS12555 PF03840 Preprotein translocase SecG subunit NIN90_RS12560 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NIN90_RS12560 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NIN90_RS12560 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NIN90_RS12560 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NIN90_RS12565 PF00809 Pterin binding enzyme NIN90_RS12570 PF00004 ATPase family associated with various cellular activities (AAA) NIN90_RS12570 PF17862 AAA+ lid domain NIN90_RS12570 PF06480 FtsH Extracellular NIN90_RS12570 PF01434 Peptidase family M41 NIN90_RS12575 PF01728 FtsJ-like methyltransferase NIN90_RS12580 PF01985 CRS1 / YhbY (CRM) domain NIN90_RS12585 PF01272 Transcription elongation factor, GreA/GreB, C-term NIN90_RS12585 PF03449 Transcription elongation factor, N-terminal NIN90_RS12590 PF13609 Gram-negative porin NIN90_RS12595 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family NIN90_RS12600 PF00571 CBS domain NIN90_RS12600 PF01769 Divalent cation transporter NIN90_RS12600 PF03448 MgtE intracellular N domain NIN90_RS12610 PF01479 S4 domain NIN90_RS12610 PF00579 tRNA synthetases class I (W and Y) NIN90_RS12615 PF04225 Opacity-associated protein A LysM-like domain NIN90_RS12615 PF01551 Peptidase family M23 NIN90_RS12620 PF00873 AcrB/AcrD/AcrF family NIN90_RS12630 PF01521 Iron-sulphur cluster biosynthesis NIN90_RS12635 PF00202 Aminotransferase class-III NIN90_RS12640 PF01594 AI-2E family transporter NIN90_RS12645 PF08468 Methyltransferase small domain N-terminal NIN90_RS12645 PF05175 Methyltransferase small domain NIN90_RS12650 PF00072 Response regulator receiver domain NIN90_RS12650 PF09308 LuxQ, periplasmic NIN90_RS12650 PF00512 His Kinase A (phospho-acceptor) domain NIN90_RS12650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIN90_RS12655 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NIN90_RS12660 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS12665 PF12911 N-terminal TM domain of oligopeptide transport permease C NIN90_RS12665 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS12670 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NIN90_RS12670 PF00005 ABC transporter NIN90_RS12675 PF00005 ABC transporter NIN90_RS12675 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NIN90_RS12685 PF01869 BadF/BadG/BcrA/BcrD ATPase family NIN90_RS12690 PF00728 Glycosyl hydrolase family 20, catalytic domain NIN90_RS12690 PF02838 Glycosyl hydrolase family 20, domain 2 NIN90_RS12695 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain NIN90_RS12695 PF06165 Glycosyltransferase family 36 NIN90_RS12700 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NIN90_RS12700 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NIN90_RS12700 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NIN90_RS12700 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NIN90_RS12705 PF00005 ABC transporter NIN90_RS12715 PF13416 Bacterial extracellular solute-binding protein NIN90_RS12720 PF00909 Ammonium Transporter Family NIN90_RS12725 PF00543 Nitrogen regulatory protein P-II NIN90_RS12730 PF06062 Uncharacterised protein family (UPF0231) NIN90_RS12735 PF00330 Aconitase family (aconitate hydratase) NIN90_RS12735 PF06434 Aconitate hydratase 2 N-terminus NIN90_RS12735 PF11791 Aconitate B N-terminal domain NIN90_RS12740 PF01734 Patatin-like phospholipase NIN90_RS12745 PF00912 Transglycosylase NIN90_RS12745 PF14814 Bifunctional transglycosylase second domain NIN90_RS12745 PF00905 Penicillin binding protein transpeptidase domain NIN90_RS12750 PF00270 DEAD/DEAH box helicase NIN90_RS12750 PF00271 Helicase conserved C-terminal domain NIN90_RS12750 PF08482 ATP-dependent helicase C-terminal NIN90_RS12750 PF04408 Helicase associated domain (HA2) NIN90_RS12755 PF03749 Sugar fermentation stimulation protein RE domain NIN90_RS12755 PF17746 SfsA N-terminal OB domain NIN90_RS12760 PF01258 Prokaryotic dksA/traR C4-type zinc finger NIN90_RS12765 PF00749 tRNA synthetases class I (E and Q), catalytic domain NIN90_RS12770 PF01743 Poly A polymerase head domain NIN90_RS12770 PF12627 Probable RNA and SrmB- binding site of polymerase A NIN90_RS12770 PF12626 Polymerase A arginine-rich C-terminus NIN90_RS12775 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NIN90_RS12780 PF02548 Ketopantoate hydroxymethyltransferase NIN90_RS12785 PF02569 Pantoate-beta-alanine ligase NIN90_RS12790 PF01061 ABC-2 type transporter NIN90_RS12795 PF00005 ABC transporter NIN90_RS12800 PF00484 Carbonic anhydrase NIN90_RS12805 PF00156 Phosphoribosyl transferase domain NIN90_RS12810 PF00440 Bacterial regulatory proteins, tetR family NIN90_RS12815 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NIN90_RS12815 PF07992 Pyridine nucleotide-disulphide oxidoreductase NIN90_RS12820 PF02817 e3 binding domain NIN90_RS12820 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NIN90_RS12820 PF00364 Biotin-requiring enzyme NIN90_RS12825 PF00456 Transketolase, thiamine diphosphate binding domain NIN90_RS12825 PF17831 Pyruvate dehydrogenase E1 component middle domain NIN90_RS12830 PF00392 Bacterial regulatory proteins, gntR family NIN90_RS12830 PF07729 FCD domain NIN90_RS12835 PF01368 DHH family NIN90_RS12835 PF17768 RecJ OB domain NIN90_RS12835 PF02272 DHHA1 domain NIN90_RS12840 PF10411 Disulfide bond isomerase protein N-terminus NIN90_RS12840 PF13098 Thioredoxin-like domain NIN90_RS12845 PF00589 Phage integrase family NIN90_RS12845 PF02899 Phage integrase, N-terminal SAM-like domain NIN90_RS12850 PF00258 Flavodoxin NIN90_RS12855 PF01510 N-acetylmuramoyl-L-alanine amidase NIN90_RS12860 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NIN90_RS12860 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NIN90_RS12865 PF00114 Pilin (bacterial filament) NIN90_RS12865 PF07963 Prokaryotic N-terminal methylation motif NIN90_RS12870 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NIN90_RS12870 PF00437 Type II/IV secretion system protein NIN90_RS12875 PF00482 Type II secretion system (T2SS), protein F NIN90_RS12880 PF06750 Bacterial Peptidase A24 N-terminal domain NIN90_RS12880 PF01478 Type IV leader peptidase family NIN90_RS12885 PF01121 Dephospho-CoA kinase NIN90_RS12890 PF07072 Cell division protein NIN90_RS12895 PF03884 DNA gyrase inhibitor YacG NIN90_RS12900 PF03989 DNA gyrase C-terminal domain, beta-propeller NIN90_RS12900 PF00521 DNA gyrase/topoisomerase IV, subunit A NIN90_RS12905 PF01751 Toprim domain NIN90_RS12905 PF00204 DNA gyrase B NIN90_RS12905 PF00986 DNA gyrase B subunit, carboxyl terminus NIN90_RS12905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIN90_RS12910 PF05728 Uncharacterised protein family (UPF0227) NIN90_RS12915 PF00149 Calcineurin-like phosphoesterase NIN90_RS12920 PF06853 Protein of unknown function (DUF1249) NIN90_RS12925 PF00293 NUDIX domain NIN90_RS12930 PF02321 Outer membrane efflux protein NIN90_RS12935 PF00294 pfkB family carbohydrate kinase NIN90_RS12935 PF01467 Cytidylyltransferase-like NIN90_RS12940 PF03710 Glutamate-ammonia ligase adenylyltransferase NIN90_RS12940 PF08335 GlnD PII-uridylyltransferase NIN90_RS12945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIN90_RS12945 PF02743 Cache domain NIN90_RS12945 PF00672 HAMP domain NIN90_RS12950 PF07885 Ion channel NIN90_RS12955 PF01928 CYTH domain NIN90_RS12960 PF01865 Protein of unknown function DUF47 NIN90_RS12965 PF01384 Phosphate transporter family NIN90_RS12970 PF08239 Bacterial SH3 domain NIN90_RS12980 PF01471 Putative peptidoglycan binding domain NIN90_RS12980 PF13401 AAA domain NIN90_RS12985 PF12627 Probable RNA and SrmB- binding site of polymerase A NIN90_RS12985 PF01966 HD domain NIN90_RS12985 PF01743 Poly A polymerase head domain NIN90_RS12990 PF00113 Enolase, C-terminal TIM barrel domain NIN90_RS12990 PF03952 Enolase, N-terminal domain NIN90_RS12995 PF06418 CTP synthase N-terminus NIN90_RS12995 PF00117 Glutamine amidotransferase class-I NIN90_RS13000 PF03819 MazG nucleotide pyrophosphohydrolase domain NIN90_RS13005 PF13291 ACT domain NIN90_RS13005 PF04607 Region found in RelA / SpoT proteins NIN90_RS13005 PF02824 TGS domain NIN90_RS13010 PF01938 TRAM domain NIN90_RS13010 PF05958 tRNA (Uracil-5-)-methyltransferase NIN90_RS13015 PF00672 HAMP domain NIN90_RS13015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIN90_RS13015 PF01627 Hpt domain NIN90_RS13015 PF00512 His Kinase A (phospho-acceptor) domain NIN90_RS13015 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NIN90_RS13015 PF00072 Response regulator receiver domain NIN90_RS13020 PF01648 4'-phosphopantetheinyl transferase superfamily NIN90_RS13025 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ NIN90_RS13030 PF02565 Recombination protein O C terminal NIN90_RS13030 PF11967 Recombination protein O N terminal NIN90_RS13035 PF07650 KH domain NIN90_RS13035 PF01926 50S ribosome-binding GTPase NIN90_RS13040 PF00035 Double-stranded RNA binding motif NIN90_RS13040 PF14622 Ribonuclease-III-like NIN90_RS13045 PF10502 Signal peptidase, peptidase S26 NIN90_RS13050 PF00009 Elongation factor Tu GTP binding domain NIN90_RS13050 PF03144 Elongation factor Tu domain 2 NIN90_RS13050 PF06421 GTP-binding protein LepA C-terminus NIN90_RS13050 PF00679 Elongation factor G C-terminus NIN90_RS13060 PF17188 MucB/RseB C-terminal domain NIN90_RS13060 PF03888 MucB/RseB N-terminal domain NIN90_RS13065 PF03872 Anti sigma-E protein RseA, N-terminal domain NIN90_RS13065 PF03873 Anti sigma-E protein RseA, C-terminal domain NIN90_RS13070 PF04542 Sigma-70 region 2 NIN90_RS13070 PF08281 Sigma-70, region 4 NIN90_RS13075 PF00890 FAD binding domain NIN90_RS13075 PF02910 Fumarate reductase flavoprotein C-term NIN90_RS13085 PF03937 Flavinator of succinate dehydrogenase NIN90_RS13105 PF01494 FAD binding domain NIN90_RS13110 PF01494 FAD binding domain NIN90_RS13115 PF03695 Uncharacterised protein family (UPF0149) NIN90_RS13120 PF05164 Cell division protein ZapA NIN90_RS13130 PF01812 5-formyltetrahydrofolate cyclo-ligase family NIN90_RS13135 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) NIN90_RS13140 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NIN90_RS13140 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NIN90_RS13140 PF01842 ACT domain NIN90_RS13145 PF10369 Small subunit of acetolactate synthase NIN90_RS13150 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NIN90_RS13150 PF00205 Thiamine pyrophosphate enzyme, central domain NIN90_RS13150 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NIN90_RS13155 PF00501 AMP-binding enzyme NIN90_RS13160 PF03466 LysR substrate binding domain NIN90_RS13160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS13170 PF01569 PAP2 superfamily NIN90_RS13180 PF08502 LeuA allosteric (dimerisation) domain NIN90_RS13180 PF00682 HMGL-like NIN90_RS13185 PF00180 Isocitrate/isopropylmalate dehydrogenase NIN90_RS13190 PF00330 Aconitase family (aconitate hydratase) NIN90_RS13195 PF00694 Aconitase C-terminal domain NIN90_RS13240 PF00072 Response regulator receiver domain NIN90_RS13250 PF03171 2OG-Fe(II) oxygenase superfamily NIN90_RS13250 PF14226 non-haem dioxygenase in morphine synthesis N-terminal NIN90_RS13265 PF07694 5TMR of 5TMR-LYT NIN90_RS13265 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS13275 PF03739 Lipopolysaccharide export system permease LptF/LptG NIN90_RS13280 PF03739 Lipopolysaccharide export system permease LptF/LptG NIN90_RS13285 PF02789 Cytosol aminopeptidase family, N-terminal domain NIN90_RS13285 PF00883 Cytosol aminopeptidase family, catalytic domain NIN90_RS13295 PF08264 Anticodon-binding domain of tRNA NIN90_RS13295 PF10458 Valyl tRNA synthetase tRNA binding arm NIN90_RS13295 PF00133 tRNA synthetases class I (I, L, M and V) NIN90_RS13300 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NIN90_RS13300 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NIN90_RS13305 PF00849 RNA pseudouridylate synthase NIN90_RS13315 PF00271 Helicase conserved C-terminal domain NIN90_RS13315 PF12137 RNA polymerase recycling family C-terminal NIN90_RS13315 PF00176 SNF2 family N-terminal domain NIN90_RS13315 PF18339 RapA N-terminal Tudor like domain 1 NIN90_RS13315 PF18337 RapA N-terminal Tudor like domain NIN90_RS13320 PF02562 PhoH-like protein NIN90_RS13320 PF13638 PIN domain NIN90_RS13325 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NIN90_RS13325 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NIN90_RS13330 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NIN90_RS13330 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NIN90_RS13335 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain NIN90_RS13335 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain NIN90_RS13340 PF01042 Endoribonuclease L-PSP NIN90_RS13345 PF01553 Acyltransferase NIN90_RS13350 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NIN90_RS13355 PF01722 BolA-like protein NIN90_RS13360 PF13466 STAS domain NIN90_RS13365 PF05494 MlaC protein NIN90_RS13370 PF02470 MlaD protein NIN90_RS13375 PF02405 Permease MlaE NIN90_RS13380 PF00005 ABC transporter NIN90_RS13385 PF01699 Sodium/calcium exchanger protein NIN90_RS13390 PF01380 SIS domain NIN90_RS13390 PF00571 CBS domain NIN90_RS13405 PF03968 OstA-like protein NIN90_RS13410 PF00005 ABC transporter NIN90_RS13410 PF12399 Branched-chain amino acid ATP-binding cassette transporter NIN90_RS13415 PF00309 Sigma-54 factor, Activator interacting domain (AID) NIN90_RS13415 PF04963 Sigma-54 factor, core binding domain NIN90_RS13415 PF04552 Sigma-54, DNA binding domain NIN90_RS13420 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NIN90_RS13425 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NIN90_RS13430 PF03668 P-loop ATPase protein family NIN90_RS13435 PF00381 PTS HPr component phosphorylation site NIN90_RS13440 PF01769 Divalent cation transporter NIN90_RS13440 PF03448 MgtE intracellular N domain NIN90_RS13440 PF00571 CBS domain NIN90_RS13445 PF01523 Putative modulator of DNA gyrase NIN90_RS13450 PF04751 Protein of unknown function (DUF615) NIN90_RS13455 PF00005 ABC transporter NIN90_RS13460 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS13470 PF02441 Flavoprotein NIN90_RS13475 PF01225 Mur ligase family, catalytic domain NIN90_RS13475 PF08245 Mur ligase middle domain NIN90_RS13475 PF02875 Mur ligase family, glutamate ligase domain NIN90_RS13480 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain NIN90_RS13485 PF00719 Inorganic pyrophosphatase NIN90_RS13495 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like NIN90_RS13500 PF04357 TamB, inner membrane protein subunit of TAM complex NIN90_RS13505 PF01103 Surface antigen NIN90_RS13505 PF07244 Surface antigen variable number repeat NIN90_RS13505 PF17243 POTRA domain TamA domain 1 NIN90_RS13510 PF01625 Peptide methionine sulfoxide reductase NIN90_RS13515 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) NIN90_RS13530 PF00005 ABC transporter NIN90_RS13530 PF02687 FtsX-like permease family NIN90_RS13530 PF12704 MacB-like periplasmic core domain NIN90_RS13555 PF02080 TrkA-C domain NIN90_RS13555 PF03600 Citrate transporter NIN90_RS13560 PF00009 Elongation factor Tu GTP binding domain NIN90_RS13565 PF01507 Phosphoadenosine phosphosulfate reductase family NIN90_RS13570 PF10414 Sirohaem synthase dimerisation region NIN90_RS13570 PF14824 Sirohaem biosynthesis protein central NIN90_RS13570 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NIN90_RS13575 PF02872 5'-nucleotidase, C-terminal domain NIN90_RS13575 PF00149 Calcineurin-like phosphoesterase NIN90_RS13585 PF00270 DEAD/DEAH box helicase NIN90_RS13585 PF00271 Helicase conserved C-terminal domain NIN90_RS13585 PF03880 DbpA RNA binding domain NIN90_RS13590 PF13673 Acetyltransferase (GNAT) domain NIN90_RS13600 PF04225 Opacity-associated protein A LysM-like domain NIN90_RS13600 PF08525 Opacity-associated protein A N-terminal motif NIN90_RS13605 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NIN90_RS13605 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NIN90_RS13615 PF01196 Ribosomal protein L17 NIN90_RS13620 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NIN90_RS13620 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NIN90_RS13620 PF01000 RNA polymerase Rpb3/RpoA insert domain NIN90_RS13625 PF01479 S4 domain NIN90_RS13625 PF00163 Ribosomal protein S4/S9 N-terminal domain NIN90_RS13630 PF00411 Ribosomal protein S11 NIN90_RS13635 PF00416 Ribosomal protein S13/S18 NIN90_RS13640 PF00444 Ribosomal protein L36 NIN90_RS13645 PF00344 SecY translocase NIN90_RS13650 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NIN90_RS13655 PF00327 Ribosomal protein L30p/L7e NIN90_RS13660 PF00333 Ribosomal protein S5, N-terminal domain NIN90_RS13660 PF03719 Ribosomal protein S5, C-terminal domain NIN90_RS13665 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NIN90_RS13670 PF00347 Ribosomal protein L6 NIN90_RS13675 PF00410 Ribosomal protein S8 NIN90_RS13680 PF00253 Ribosomal protein S14p/S29e NIN90_RS13685 PF00281 Ribosomal protein L5 NIN90_RS13685 PF00673 ribosomal L5P family C-terminus NIN90_RS13690 PF00467 KOW motif NIN90_RS13690 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NIN90_RS13695 PF00238 Ribosomal protein L14p/L23e NIN90_RS13700 PF00366 Ribosomal protein S17 NIN90_RS13705 PF00831 Ribosomal L29 protein NIN90_RS13710 PF00252 Ribosomal protein L16p/L10e NIN90_RS13715 PF07650 KH domain NIN90_RS13715 PF00189 Ribosomal protein S3, C-terminal domain NIN90_RS13720 PF00237 Ribosomal protein L22p/L17e NIN90_RS13725 PF00203 Ribosomal protein S19 NIN90_RS13730 PF03947 Ribosomal Proteins L2, C-terminal domain NIN90_RS13730 PF00181 Ribosomal Proteins L2, RNA binding domain NIN90_RS13735 PF00276 Ribosomal protein L23 NIN90_RS13740 PF00573 Ribosomal protein L4/L1 family NIN90_RS13745 PF00297 Ribosomal protein L3 NIN90_RS13750 PF00338 Ribosomal protein S10p/S20e NIN90_RS13755 PF00588 SpoU rRNA Methylase family NIN90_RS13755 PF08032 RNA 2'-O ribose methyltransferase substrate binding NIN90_RS13760 PF17876 Cold shock domain NIN90_RS13760 PF08461 Ribonuclease R winged-helix domain NIN90_RS13760 PF08206 Ribonuclease B OB domain NIN90_RS13760 PF00773 RNB domain NIN90_RS13760 PF00575 S1 RNA binding domain NIN90_RS13765 PF00884 Sulfatase NIN90_RS13765 PF11893 Domain of unknown function (DUF3413) NIN90_RS13770 PF08238 Sel1 repeat NIN90_RS13775 PF00709 Adenylosuccinate synthetase NIN90_RS13780 PF01112 Asparaginase NIN90_RS13785 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NIN90_RS13790 PF09526 Probable metal-binding protein (DUF2387) NIN90_RS13795 PF00999 Sodium/hydrogen exchanger family NIN90_RS13795 PF02254 TrkA-N domain NIN90_RS13800 PF02525 Flavodoxin-like fold NIN90_RS13805 PF00005 ABC transporter NIN90_RS13805 PF12848 ABC transporter NIN90_RS13815 PF00561 alpha/beta hydrolase fold NIN90_RS13820 PF06794 Uncharacterised protein family (UPF0270) NIN90_RS13825 PF00485 Phosphoribulokinase / Uridine kinase family NIN90_RS13830 PF00027 Cyclic nucleotide-binding domain NIN90_RS13830 PF13545 Crp-like helix-turn-helix domain NIN90_RS13840 PF00171 Aldehyde dehydrogenase family NIN90_RS13845 PF04958 Arginine N-succinyltransferase beta subunit NIN90_RS13850 PF00202 Aminotransferase class-III NIN90_RS13855 PF00117 Glutamine amidotransferase class-I NIN90_RS13865 PF00579 tRNA synthetases class I (W and Y) NIN90_RS13870 PF13419 Haloacid dehalogenase-like hydrolase NIN90_RS13875 PF00834 Ribulose-phosphate 3 epimerase family NIN90_RS13880 PF02086 D12 class N6 adenine-specific DNA methyltransferase NIN90_RS13890 PF01761 3-dehydroquinate synthase NIN90_RS13895 PF01202 Shikimate kinase NIN90_RS13900 PF11741 AMIN domain NIN90_RS13900 PF00263 Bacterial type II and III secretion system protein NIN90_RS13900 PF03958 Bacterial type II/III secretion system short domain NIN90_RS13900 PF07660 Secretin and TonB N terminus short domain NIN90_RS13905 PF04351 Pilus assembly protein, PilP NIN90_RS13925 PF17092 Penicillin-binding protein OB-like domain NIN90_RS13925 PF00912 Transglycosylase NIN90_RS13925 PF00905 Penicillin binding protein transpeptidase domain NIN90_RS13930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS13930 PF03466 LysR substrate binding domain NIN90_RS13935 PF08534 Redoxin NIN90_RS13935 PF00462 Glutaredoxin NIN90_RS13945 PF14698 Argininosuccinate lyase C-terminal NIN90_RS13945 PF00206 Lyase NIN90_RS13945 PF00583 Acetyltransferase (GNAT) family NIN90_RS13950 PF00764 Arginosuccinate synthase NIN90_RS13955 PF00696 Amino acid kinase family NIN90_RS13960 PF02774 Semialdehyde dehydrogenase, dimerisation domain NIN90_RS13960 PF01118 Semialdehyde dehydrogenase, NAD binding domain NIN90_RS13965 PF07687 Peptidase dimerisation domain NIN90_RS13965 PF01546 Peptidase family M20/M25/M40 NIN90_RS13970 PF00311 Phosphoenolpyruvate carboxylase NIN90_RS13980 PF00132 Bacterial transferase hexapeptide (six repeats) NIN90_RS13980 PF06426 Serine acetyltransferase, N-terminal NIN90_RS13985 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NIN90_RS13985 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NIN90_RS13990 PF02556 Preprotein translocase subunit SecB NIN90_RS13995 PF00581 Rhodanese-like domain NIN90_RS14000 PF00152 tRNA synthetases class II (D, K and N) NIN90_RS14005 PF02910 Fumarate reductase flavoprotein C-term NIN90_RS14005 PF00890 FAD binding domain NIN90_RS14010 PF13183 4Fe-4S dicluster domain NIN90_RS14010 PF13085 2Fe-2S iron-sulfur cluster binding domain NIN90_RS14015 PF02300 Fumarate reductase subunit C NIN90_RS14020 PF02313 Fumarate reductase subunit D NIN90_RS14025 PF08207 Elongation factor P (EF-P) KOW-like domain NIN90_RS14025 PF09285 Elongation factor P, C-terminal NIN90_RS14025 PF01132 Elongation factor P (EF-P) OB domain NIN90_RS14030 PF04055 Radical SAM superfamily NIN90_RS14035 PF02308 MgtC family NIN90_RS14045 PF00005 ABC transporter NIN90_RS14050 PF00118 TCP-1/cpn60 chaperonin family NIN90_RS14055 PF00166 Chaperonin 10 Kd subunit NIN90_RS14080 PF00121 Triosephosphate isomerase NIN90_RS14085 PF01554 MatE NIN90_RS14090 PF03737 Aldolase/RraA NIN90_RS14095 PF01040 UbiA prenyltransferase family NIN90_RS14100 PF10431 C-terminal, D2-small domain, of ClpB protein NIN90_RS14100 PF07724 AAA domain (Cdc48 subfamily) NIN90_RS14100 PF00004 ATPase family associated with various cellular activities (AAA) NIN90_RS14105 PF00227 Proteasome subunit NIN90_RS14115 PF00356 Bacterial regulatory proteins, lacI family NIN90_RS14120 PF17764 3′ DNA-binding domain (3′BD) NIN90_RS14120 PF00270 DEAD/DEAH box helicase NIN90_RS14120 PF18074 Primosomal protein N C-terminal domain NIN90_RS14120 PF18319 PriA DNA helicase Cys-rich region (CRR) domain NIN90_RS14120 PF00271 Helicase conserved C-terminal domain NIN90_RS14125 PF01197 Ribosomal protein L31 NIN90_RS14130 PF00390 Malic enzyme, N-terminal domain NIN90_RS14130 PF03949 Malic enzyme, NAD binding domain NIN90_RS14135 PF01340 Met Apo-repressor, MetJ NIN90_RS14140 PF01053 Cys/Met metabolism PLP-dependent enzyme NIN90_RS14145 PF00696 Amino acid kinase family NIN90_RS14145 PF00742 Homoserine dehydrogenase NIN90_RS14145 PF03447 Homoserine dehydrogenase, NAD binding domain NIN90_RS14150 PF02219 Methylenetetrahydrofolate reductase NIN90_RS14155 PF06005 Cell division protein ZapB NIN90_RS14160 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded NIN90_RS14165 PF00365 Phosphofructokinase NIN90_RS14170 PF01545 Cation efflux family NIN90_RS14170 PF16916 Dimerisation domain of Zinc Transporter NIN90_RS14180 PF00486 Transcriptional regulatory protein, C terminal NIN90_RS14180 PF00072 Response regulator receiver domain NIN90_RS14185 PF16527 Two-component sensor protein CpxA, periplasmic domain NIN90_RS14185 PF00672 HAMP domain NIN90_RS14185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIN90_RS14185 PF00512 His Kinase A (phospho-acceptor) domain NIN90_RS14190 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NIN90_RS14190 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NIN90_RS14195 PF00588 SpoU rRNA Methylase family NIN90_RS14200 PF04186 FxsA cytoplasmic membrane protein NIN90_RS14205 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS14210 PF00206 Lyase NIN90_RS14210 PF10415 Fumarase C C-terminus NIN90_RS14215 PF03605 Anaerobic c4-dicarboxylate membrane transporter NIN90_RS14220 PF03606 C4-dicarboxylate anaerobic carrier NIN90_RS14230 PF00696 Amino acid kinase family NIN90_RS14235 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NIN90_RS14235 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NIN90_RS14240 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NIN90_RS14240 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NIN90_RS14245 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain NIN90_RS14245 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain NIN90_RS14250 PF02863 Arginine repressor, C-terminal domain NIN90_RS14250 PF01316 Arginine repressor, DNA binding domain NIN90_RS14255 PF11412 Disulphide bond corrector protein DsbC NIN90_RS14255 PF02683 Cytochrome C biogenesis protein transmembrane region NIN90_RS14260 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NIN90_RS14260 PF11852 Domain of unknown function (DUF3372) NIN90_RS14260 PF03714 Bacterial pullanase-associated domain NIN90_RS14260 PF18494 Pullulanase Ins domain NIN90_RS14260 PF17967 Pullulanase N2 domain NIN90_RS14265 PF00072 Response regulator receiver domain NIN90_RS14265 PF00196 Bacterial regulatory proteins, luxR family NIN90_RS14270 PF00999 Sodium/hydrogen exchanger family NIN90_RS14270 PF02080 TrkA-C domain NIN90_RS14270 PF03471 Transporter associated domain NIN90_RS14280 PF00474 Sodium:solute symporter family NIN90_RS14285 PF02592 Putative vitamin uptake transporter NIN90_RS14290 PF00625 Guanylate kinase NIN90_RS14295 PF01192 RNA polymerase Rpb6 NIN90_RS14300 PF02824 TGS domain NIN90_RS14300 PF04607 Region found in RelA / SpoT proteins NIN90_RS14300 PF13291 ACT domain NIN90_RS14305 PF13542 Helix-turn-helix domain of transposase family ISL3 NIN90_RS14305 PF01610 Transposase NIN90_RS14305 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NIN90_RS14310 PF12105 SpoU, rRNA methylase, C-terminal NIN90_RS14310 PF00588 SpoU rRNA Methylase family NIN90_RS14315 PF00270 DEAD/DEAH box helicase NIN90_RS14315 PF00271 Helicase conserved C-terminal domain NIN90_RS14315 PF17191 RecG wedge domain NIN90_RS14320 PF00860 Permease family NIN90_RS14325 PF00512 His Kinase A (phospho-acceptor) domain NIN90_RS14325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIN90_RS14325 PF00672 HAMP domain NIN90_RS14330 PF00486 Transcriptional regulatory protein, C terminal NIN90_RS14330 PF00072 Response regulator receiver domain NIN90_RS14335 PF01081 KDPG and KHG aldolase NIN90_RS14340 PF02447 GntP family permease NIN90_RS14345 PF01202 Shikimate kinase NIN90_RS14350 PF00920 Dehydratase family NIN90_RS14355 PF00356 Bacterial regulatory proteins, lacI family NIN90_RS14355 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NIN90_RS14360 PF01272 Transcription elongation factor, GreA/GreB, C-term NIN90_RS14360 PF03449 Transcription elongation factor, N-terminal NIN90_RS14370 PF16921 Tex protein YqgF-like domain NIN90_RS14370 PF09371 Tex-like protein N-terminal domain NIN90_RS14370 PF00575 S1 RNA binding domain NIN90_RS14370 PF17674 HHH domain NIN90_RS14380 PF00561 alpha/beta hydrolase fold NIN90_RS14385 PF00156 Phosphoribosyl transferase domain NIN90_RS14390 PF01521 Iron-sulphur cluster biosynthesis NIN90_RS14390 PF01106 NifU-like domain NIN90_RS14395 PF00293 NUDIX domain NIN90_RS14400 PF00459 Inositol monophosphatase family NIN90_RS14405 PF01203 Type II secretion system (T2SS), protein N NIN90_RS14410 PF04612 Type II secretion system (T2SS), protein M NIN90_RS14415 PF12693 GspL periplasmic domain NIN90_RS14415 PF05134 Type II secretion system (T2SS), protein L NIN90_RS14420 PF03934 Type II secretion system (T2SS), protein K NIN90_RS14425 PF11612 Type II secretion system (T2SS), protein J NIN90_RS14425 PF07963 Prokaryotic N-terminal methylation motif NIN90_RS14430 PF07963 Prokaryotic N-terminal methylation motif NIN90_RS14430 PF02501 Type II secretion system (T2SS), protein I NIN90_RS14435 PF12019 Type II transport protein GspH NIN90_RS14440 PF07963 Prokaryotic N-terminal methylation motif NIN90_RS14440 PF08334 Type II secretion system (T2SS), protein G NIN90_RS14445 PF00482 Type II secretion system (T2SS), protein F NIN90_RS14450 PF00437 Type II/IV secretion system protein NIN90_RS14455 PF00263 Bacterial type II and III secretion system protein NIN90_RS14455 PF03958 Bacterial type II/III secretion system short domain NIN90_RS14460 PF11356 Type II secretion system protein C NIN90_RS14465 PF01479 S4 domain NIN90_RS14470 PF01430 Hsp33 protein NIN90_RS14475 PF01293 Phosphoenolpyruvate carboxykinase NIN90_RS14480 PF05170 AsmA family NIN90_RS14485 PF00583 Acetyltransferase (GNAT) family NIN90_RS14485 PF09500 Putative thioesterase (yiiD_Cterm) NIN90_RS14490 PF02580 D-Tyr-tRNA(Tyr) deacylase NIN90_RS14495 PF03631 Virulence factor BrkB NIN90_RS14510 PF03144 Elongation factor Tu domain 2 NIN90_RS14510 PF00679 Elongation factor G C-terminus NIN90_RS14510 PF00009 Elongation factor Tu GTP binding domain NIN90_RS14515 PF00120 Glutamine synthetase, catalytic domain NIN90_RS14515 PF03951 Glutamine synthetase, beta-Grasp domain NIN90_RS14525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIN90_RS14525 PF00512 His Kinase A (phospho-acceptor) domain NIN90_RS14525 PF00989 PAS fold NIN90_RS14530 PF00072 Response regulator receiver domain NIN90_RS14530 PF02954 Bacterial regulatory protein, Fis family NIN90_RS14530 PF00158 Sigma-54 interaction domain NIN90_RS14535 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS14535 PF00563 EAL domain NIN90_RS14535 PF03707 Bacterial signalling protein N terminal repeat NIN90_RS14535 PF13188 PAS domain NIN90_RS14540 PF00962 Adenosine/AMP deaminase NIN90_RS14610 PF01177 Asp/Glu/Hydantoin racemase NIN90_RS14620 PF07715 TonB-dependent Receptor Plug Domain NIN90_RS14620 PF00593 TonB dependent receptor NIN90_RS14625 PF05958 tRNA (Uracil-5-)-methyltransferase NIN90_RS14635 PF00440 Bacterial regulatory proteins, tetR family NIN90_RS14640 PF07992 Pyridine nucleotide-disulphide oxidoreductase NIN90_RS14640 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NIN90_RS14645 PF01554 MatE NIN90_RS14655 PF00717 Peptidase S24-like NIN90_RS14655 PF01726 LexA DNA binding domain NIN90_RS14660 PF01219 Prokaryotic diacylglycerol kinase NIN90_RS14665 PF01553 Acyltransferase NIN90_RS14670 PF01040 UbiA prenyltransferase family NIN90_RS14675 PF04345 Chorismate lyase NIN90_RS14680 PF03748 Flagellar basal body-associated protein FliL NIN90_RS14685 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease NIN90_RS14685 PF01694 Rhomboid family NIN90_RS14690 PF00581 Rhodanese-like domain NIN90_RS14695 PF04542 Sigma-70 region 2 NIN90_RS14695 PF04545 Sigma-70, region 4 NIN90_RS14695 PF00140 Sigma-70 factor, region 1.2 NIN90_RS14700 PF18075 FtsX extracellular domain NIN90_RS14705 PF00005 ABC transporter NIN90_RS14710 PF02881 SRP54-type protein, helical bundle domain NIN90_RS14710 PF00448 SRP54-type protein, GTPase domain NIN90_RS14725 PF01914 MarC family integral membrane protein NIN90_RS14755 PF00210 Ferritin-like domain NIN90_RS14770 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NIN90_RS14770 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NIN90_RS14775 PF01022 Bacterial regulatory protein, arsR family NIN90_RS14780 PF00563 EAL domain NIN90_RS14780 PF08668 HDOD domain NIN90_RS14785 PF01810 LysE type translocator NIN90_RS14790 PF12146 Serine aminopeptidase, S33 NIN90_RS14810 PF03942 DTW domain NIN90_RS14815 PF10442 FIST C domain NIN90_RS14815 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS14815 PF08495 FIST N domain NIN90_RS14815 PF00563 EAL domain NIN90_RS14820 PF13419 Haloacid dehalogenase-like hydrolase NIN90_RS14825 PF02899 Phage integrase, N-terminal SAM-like domain NIN90_RS14825 PF00589 Phage integrase family NIN90_RS14830 PF04340 Protein of unknown function, DUF484 NIN90_RS14835 PF01678 Diaminopimelate epimerase NIN90_RS14840 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NIN90_RS14840 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NIN90_RS14850 PF01491 Frataxin-like domain NIN90_RS14855 PF12633 Adenylate cyclase NT domain NIN90_RS14855 PF01295 Adenylate cyclase, class-I NIN90_RS14860 PF03900 Porphobilinogen deaminase, C-terminal domain NIN90_RS14860 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NIN90_RS14865 PF02602 Uroporphyrinogen-III synthase HemD NIN90_RS14870 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase NIN90_RS14875 PF07219 HemY protein N-terminus NIN90_RS14875 PF07719 Tetratricopeptide repeat NIN90_RS14880 PF04055 Radical SAM superfamily NIN90_RS14880 PF06969 HemN C-terminal domain NIN90_RS14885 PF10675 Protein of unknown function (DUF2489) NIN90_RS14890 PF04220 Der GTPase activator (YihI) NIN90_RS14900 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NIN90_RS14905 PF01926 50S ribosome-binding GTPase NIN90_RS14910 PF01348 Type II intron maturase NIN90_RS14910 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NIN90_RS14915 PF01612 3'-5' exonuclease NIN90_RS14915 PF00476 DNA polymerase family A NIN90_RS14915 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NIN90_RS14915 PF01367 5'-3' exonuclease, C-terminal SAM fold NIN90_RS14925 PF00490 Delta-aminolevulinic acid dehydratase NIN90_RS14930 PF01026 TatD related DNase NIN90_RS14935 PF00902 Sec-independent protein translocase protein (TatC) NIN90_RS14940 PF02416 mttA/Hcf106 family NIN90_RS14945 PF02416 mttA/Hcf106 family NIN90_RS14950 PF03109 ABC1 family NIN90_RS14955 PF02036 SCP-2 sterol transfer family NIN90_RS14960 PF01209 ubiE/COQ5 methyltransferase family NIN90_RS14965 PF02646 RmuC family NIN90_RS14980 PF12833 Helix-turn-helix domain NIN90_RS14980 PF02311 AraC-like ligand binding domain NIN90_RS14990 PF02610 L-arabinose isomerase NIN90_RS14990 PF11762 L-arabinose isomerase C-terminal domain NIN90_RS14995 PF00596 Class II Aldolase and Adducin N-terminal domain NIN90_RS15000 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NIN90_RS15000 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NIN90_RS15005 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NIN90_RS15010 PF00005 ABC transporter NIN90_RS15015 PF02653 Branched-chain amino acid transport system / permease component NIN90_RS15020 PF13407 Periplasmic binding protein domain NIN90_RS15025 PF00005 ABC transporter NIN90_RS15030 PF02653 Branched-chain amino acid transport system / permease component NIN90_RS15035 PF02653 Branched-chain amino acid transport system / permease component NIN90_RS15045 PF10625 Universal stress protein B (UspB) NIN90_RS15050 PF00210 Ferritin-like domain NIN90_RS15055 PF00582 Universal stress protein family NIN90_RS15060 PF00892 EamA-like transporter family NIN90_RS15070 PF04445 Putative SAM-dependent methyltransferase NIN90_RS15075 PF00563 EAL domain NIN90_RS15075 PF08448 PAS fold NIN90_RS15075 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS15080 PF01037 Lrp/AsnC ligand binding domain NIN90_RS15090 PF07690 Major Facilitator Superfamily NIN90_RS15095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS15095 PF03466 LysR substrate binding domain NIN90_RS15100 PF01321 Creatinase/Prolidase N-terminal domain NIN90_RS15100 PF00557 Metallopeptidase family M24 NIN90_RS15100 PF01321 Creatinase/Prolidase N-terminal domain NIN90_RS15100 PF00557 Metallopeptidase family M24 NIN90_RS15105 PF13977 BetI-type transcriptional repressor, C-terminal NIN90_RS15105 PF00440 Bacterial regulatory proteins, tetR family NIN90_RS15110 PF00171 Aldehyde dehydrogenase family NIN90_RS15115 PF00732 GMC oxidoreductase NIN90_RS15115 PF05199 GMC oxidoreductase NIN90_RS15120 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NIN90_RS15125 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS15130 PF00005 ABC transporter NIN90_RS15130 PF00571 CBS domain NIN90_RS15135 PF06968 Biotin and Thiamin Synthesis associated domain NIN90_RS15135 PF04055 Radical SAM superfamily NIN90_RS15140 PF05690 Thiazole biosynthesis protein ThiG NIN90_RS15150 PF00899 ThiF family NIN90_RS15155 PF02581 Thiamine monophosphate synthase NIN90_RS15160 PF13667 ThiC-associated domain NIN90_RS15160 PF01964 Radical SAM ThiC family NIN90_RS15165 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NIN90_RS15170 PF07732 Multicopper oxidase NIN90_RS15170 PF07731 Multicopper oxidase NIN90_RS15170 PF00394 Multicopper oxidase NIN90_RS15240 PF12724 Flavodoxin domain NIN90_RS15245 PF02386 Cation transport protein NIN90_RS15250 PF09186 Domain of unknown function (DUF1949) NIN90_RS15250 PF01205 Uncharacterized protein family UPF0029 NIN90_RS15255 PF00378 Enoyl-CoA hydratase/isomerase NIN90_RS15255 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NIN90_RS15255 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NIN90_RS15260 PF02803 Thiolase, C-terminal domain NIN90_RS15260 PF00108 Thiolase, N-terminal domain NIN90_RS15265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS15265 PF03466 LysR substrate binding domain NIN90_RS15270 PF07690 Major Facilitator Superfamily NIN90_RS15275 PF00497 Bacterial extracellular solute-binding proteins, family 3 NIN90_RS15280 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS15285 PF14602 Hexapeptide repeat of succinyl-transferase NIN90_RS15285 PF12804 MobA-like NTP transferase domain NIN90_RS15285 PF00132 Bacterial transferase hexapeptide (six repeats) NIN90_RS15290 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NIN90_RS15290 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain NIN90_RS15295 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NIN90_RS15295 PF02874 ATP synthase alpha/beta family, beta-barrel domain NIN90_RS15300 PF00231 ATP synthase NIN90_RS15305 PF02874 ATP synthase alpha/beta family, beta-barrel domain NIN90_RS15305 PF00306 ATP synthase alpha/beta chain, C terminal domain NIN90_RS15305 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NIN90_RS15310 PF00213 ATP synthase delta (OSCP) subunit NIN90_RS15315 PF00430 ATP synthase B/B' CF(0) NIN90_RS15320 PF00137 ATP synthase subunit C NIN90_RS15325 PF00119 ATP synthase A chain NIN90_RS15330 PF03899 ATP synthase I chain NIN90_RS15335 PF02195 ParB-like nuclease domain NIN90_RS15335 PF17762 HTH domain found in ParB protein NIN90_RS15340 PF13614 AAA domain NIN90_RS15345 PF02527 rRNA small subunit methyltransferase G NIN90_RS15350 PF13932 GidA associated domain NIN90_RS15350 PF01134 Glucose inhibited division protein A NIN90_RS15355 PF00258 Flavodoxin NIN90_RS15360 PF12631 MnmE helical domain NIN90_RS15360 PF10396 GTP-binding protein TrmE N-terminus NIN90_RS15360 PF01926 50S ribosome-binding GTPase NIN90_RS15365 PF02096 60Kd inner membrane protein NIN90_RS15365 PF14849 YidC periplasmic domain NIN90_RS15370 PF01809 Putative membrane protein insertion efficiency factor NIN90_RS15375 PF00825 Ribonuclease P NIN90_RS15380 PF00468 Ribosomal protein L34 NIN90_RS15385 PF00005 ABC transporter NIN90_RS15390 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS15395 PF00497 Bacterial extracellular solute-binding proteins, family 3 NIN90_RS15400 PF00589 Phage integrase family NIN90_RS15400 PF13495 Phage integrase, N-terminal SAM-like domain NIN90_RS15405 PF00005 ABC transporter NIN90_RS15405 PF16326 ABC transporter C-terminal domain NIN90_RS15405 PF12848 ABC transporter NIN90_RS15415 PF00155 Aminotransferase class I and II NIN90_RS15435 PF06719 AraC-type transcriptional regulator N-terminus NIN90_RS15435 PF12833 Helix-turn-helix domain NIN90_RS15440 PF00672 HAMP domain NIN90_RS15440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIN90_RS15440 PF12729 Four helix bundle sensory module for signal transduction NIN90_RS15500 PF13505 Outer membrane protein beta-barrel domain NIN90_RS15590 PF00959 Phage lysozyme NIN90_RS15605 PF07102 Protein of unknown function (DUF1364) NIN90_RS15635 PF01695 IstB-like ATP binding protein NIN90_RS15645 PF06415 BPG-independent PGAM N-terminus (iPGM_N) NIN90_RS15645 PF01676 Metalloenzyme superfamily NIN90_RS15660 PF13505 Outer membrane protein beta-barrel domain NIN90_RS15755 PF13491 4TM region of DNA translocase FtsK/SpoIIIE NIN90_RS15755 PF09397 Ftsk gamma domain NIN90_RS15755 PF17854 FtsK alpha domain NIN90_RS15755 PF01580 FtsK/SpoIIIE family NIN90_RS15770 PF00589 Phage integrase family NIN90_RS15770 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain NIN90_RS15785 PF02311 AraC-like ligand binding domain NIN90_RS15785 PF12833 Helix-turn-helix domain NIN90_RS15790 PF01168 Alanine racemase, N-terminal domain NIN90_RS15790 PF00842 Alanine racemase, C-terminal domain NIN90_RS15800 PF01975 Survival protein SurE NIN90_RS15815 PF12833 Helix-turn-helix domain NIN90_RS15820 PF03807 NADP oxidoreductase coenzyme F420-dependent NIN90_RS15820 PF14748 Pyrroline-5-carboxylate reductase dimerisation NIN90_RS15825 PF03480 Bacterial extracellular solute-binding protein, family 7 NIN90_RS15835 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NIN90_RS15840 PF02423 Ornithine cyclodeaminase/mu-crystallin family NIN90_RS15850 PF00474 Sodium:solute symporter family NIN90_RS15855 PF03466 LysR substrate binding domain NIN90_RS15855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS15860 PF13409 Glutathione S-transferase, N-terminal domain NIN90_RS15865 PF02230 Phospholipase/Carboxylesterase NIN90_RS15870 PF01810 LysE type translocator NIN90_RS15875 PF03480 Bacterial extracellular solute-binding protein, family 7 NIN90_RS15880 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NIN90_RS15885 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component NIN90_RS15890 PF02614 Glucuronate isomerase NIN90_RS15895 PF01232 Mannitol dehydrogenase Rossmann domain NIN90_RS15895 PF08125 Mannitol dehydrogenase C-terminal domain NIN90_RS15900 PF08666 SAF domain NIN90_RS15900 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus NIN90_RS15905 PF07729 FCD domain NIN90_RS15905 PF00392 Bacterial regulatory proteins, gntR family NIN90_RS15920 PF00563 EAL domain NIN90_RS15920 PF03707 Bacterial signalling protein N terminal repeat NIN90_RS15920 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS15925 PF00676 Dehydrogenase E1 component NIN90_RS15930 PF02779 Transketolase, pyrimidine binding domain NIN90_RS15930 PF02780 Transketolase, C-terminal domain NIN90_RS15935 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NIN90_RS15935 PF02817 e3 binding domain NIN90_RS15935 PF00364 Biotin-requiring enzyme NIN90_RS15945 PF00766 Electron transfer flavoprotein FAD-binding domain NIN90_RS15945 PF01012 Electron transfer flavoprotein domain NIN90_RS15950 PF01012 Electron transfer flavoprotein domain NIN90_RS15960 PF02798 Glutathione S-transferase, N-terminal domain NIN90_RS15965 PF00005 ABC transporter NIN90_RS15970 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS15975 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS15980 PF12849 PBP superfamily domain NIN90_RS15990 PF12833 Helix-turn-helix domain NIN90_RS15990 PF02311 AraC-like ligand binding domain NIN90_RS16000 PF03180 NLPA lipoprotein NIN90_RS16005 PF00465 Iron-containing alcohol dehydrogenase NIN90_RS16010 PF00117 Glutamine amidotransferase class-I NIN90_RS16010 PF00425 chorismate binding enzyme NIN90_RS16010 PF04715 Anthranilate synthase component I, N terminal region NIN90_RS16015 PF03466 LysR substrate binding domain NIN90_RS16015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS16020 PF00072 Response regulator receiver domain NIN90_RS16020 PF00196 Bacterial regulatory proteins, luxR family NIN90_RS16025 PF17200 Single Cache domain 2 NIN90_RS16025 PF07730 Histidine kinase NIN90_RS16030 PF03480 Bacterial extracellular solute-binding protein, family 7 NIN90_RS16040 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NIN90_RS16045 PF07516 SecA Wing and Scaffold domain NIN90_RS16045 PF07517 SecA DEAD-like domain NIN90_RS16045 PF02810 SEC-C motif NIN90_RS16045 PF01043 SecA preprotein cross-linking domain NIN90_RS16060 PF01144 Coenzyme A transferase NIN90_RS16070 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NIN90_RS16070 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NIN90_RS16075 PF00378 Enoyl-CoA hydratase/isomerase NIN90_RS16080 PF00378 Enoyl-CoA hydratase/isomerase NIN90_RS16085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NIN90_RS16085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NIN90_RS16085 PF02770 Acyl-CoA dehydrogenase, middle domain NIN90_RS16090 PF00171 Aldehyde dehydrogenase family NIN90_RS16095 PF02803 Thiolase, C-terminal domain NIN90_RS16095 PF00108 Thiolase, N-terminal domain NIN90_RS16100 PF00376 MerR family regulatory protein NIN90_RS16100 PF09278 MerR, DNA binding NIN90_RS16105 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NIN90_RS16105 PF02770 Acyl-CoA dehydrogenase, middle domain NIN90_RS16105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NIN90_RS16110 PF01039 Carboxyl transferase domain NIN90_RS16115 PF00378 Enoyl-CoA hydratase/isomerase NIN90_RS16120 PF00682 HMGL-like NIN90_RS16130 PF00578 AhpC/TSA family NIN90_RS16130 PF10417 C-terminal domain of 1-Cys peroxiredoxin NIN90_RS16135 PF13192 Thioredoxin domain NIN90_RS16135 PF07992 Pyridine nucleotide-disulphide oxidoreductase NIN90_RS16140 PF01979 Amidohydrolase family NIN90_RS16145 PF12833 Helix-turn-helix domain NIN90_RS16150 PF00465 Iron-containing alcohol dehydrogenase NIN90_RS16155 PF01966 HD domain NIN90_RS16160 PF00300 Histidine phosphatase superfamily (branch 1) NIN90_RS16170 PF01965 DJ-1/PfpI family NIN90_RS16175 PF12706 Beta-lactamase superfamily domain NIN90_RS16185 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NIN90_RS16190 PF03466 LysR substrate binding domain NIN90_RS16190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS16200 PF00892 EamA-like transporter family NIN90_RS16205 PF03466 LysR substrate binding domain NIN90_RS16205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS16220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIN90_RS16220 PF00672 HAMP domain NIN90_RS16235 PF07715 TonB-dependent Receptor Plug Domain NIN90_RS16235 PF07660 Secretin and TonB N terminus short domain NIN90_RS16235 PF00593 TonB dependent receptor NIN90_RS16250 PF05762 VWA domain containing CoxE-like protein NIN90_RS16255 PF07728 AAA domain (dynein-related subfamily) NIN90_RS16255 PF12592 Protein of unknown function (DUF3763) NIN90_RS16255 PF17868 AAA lid domain NIN90_RS16260 PF00293 NUDIX domain NIN90_RS16265 PF01212 Beta-eliminating lyase NIN90_RS16270 PF00034 Cytochrome c NIN90_RS16275 PF00440 Bacterial regulatory proteins, tetR family NIN90_RS16275 PF08361 MAATS-type transcriptional repressor, C-terminal region NIN90_RS16280 PF00270 DEAD/DEAH box helicase NIN90_RS16280 PF00271 Helicase conserved C-terminal domain NIN90_RS16285 PF04336 Acyl carrier protein phosphodiesterase NIN90_RS16290 PF03222 Tryptophan/tyrosine permease family NIN90_RS16295 PF12729 Four helix bundle sensory module for signal transduction NIN90_RS16295 PF00672 HAMP domain NIN90_RS16295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIN90_RS16300 PF16363 GDP-mannose 4,6 dehydratase NIN90_RS16305 PF05231 MASE1 NIN90_RS16305 PF08447 PAS fold NIN90_RS16305 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS16305 PF00563 EAL domain NIN90_RS16305 PF08448 PAS fold NIN90_RS16305 PF13426 PAS domain NIN90_RS16310 PF03746 LamB/YcsF family NIN90_RS16320 PF02626 Carboxyltransferase domain, subdomain A and B NIN90_RS16335 PF00005 ABC transporter NIN90_RS16340 PF13472 GDSL-like Lipase/Acylhydrolase family NIN90_RS16345 PF12241 Trans-2-enoyl-CoA reductase catalytic region NIN90_RS16345 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase NIN90_RS16345 PF07055 Enoyl reductase FAD binding domain NIN90_RS16350 PF00498 FHA domain NIN90_RS16350 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS16350 PF00563 EAL domain NIN90_RS16360 PF00226 DnaJ domain NIN90_RS16360 PF00684 DnaJ central domain NIN90_RS16360 PF01556 DnaJ C terminal domain NIN90_RS16385 PF13419 Haloacid dehalogenase-like hydrolase NIN90_RS16400 PF00294 pfkB family carbohydrate kinase NIN90_RS16405 PF00563 EAL domain NIN90_RS16405 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS16405 PF03707 Bacterial signalling protein N terminal repeat NIN90_RS16410 PF00072 Response regulator receiver domain NIN90_RS16410 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS16420 PF08669 Glycine cleavage T-protein C-terminal barrel domain NIN90_RS16420 PF01571 Aminomethyltransferase folate-binding domain NIN90_RS16430 PF00464 Serine hydroxymethyltransferase NIN90_RS16435 PF01597 Glycine cleavage H-protein NIN90_RS16440 PF02347 Glycine cleavage system P-protein NIN90_RS16445 PF02028 BCCT, betaine/carnitine/choline family transporter NIN90_RS16455 PF02253 Phospholipase A1 NIN90_RS16460 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) NIN90_RS16505 PF02558 Ketopantoate reductase PanE/ApbA NIN90_RS16505 PF08546 Ketopantoate reductase PanE/ApbA C terminal NIN90_RS16510 PF00132 Bacterial transferase hexapeptide (six repeats) NIN90_RS16515 PF06826 Predicted Permease Membrane Region NIN90_RS16515 PF02080 TrkA-C domain NIN90_RS16520 PF01717 Cobalamin-independent synthase, Catalytic domain NIN90_RS16520 PF08267 Cobalamin-independent synthase, N-terminal domain NIN90_RS16535 PF04474 Protein of unknown function (DUF554) NIN90_RS16540 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase NIN90_RS16550 PF02441 Flavoprotein NIN90_RS16555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS16555 PF03466 LysR substrate binding domain NIN90_RS16560 PF02743 Cache domain NIN90_RS16560 PF00672 HAMP domain NIN90_RS16560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIN90_RS16565 PF00512 His Kinase A (phospho-acceptor) domain NIN90_RS16565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIN90_RS16570 PF00158 Sigma-54 interaction domain NIN90_RS16570 PF02954 Bacterial regulatory protein, Fis family NIN90_RS16570 PF00072 Response regulator receiver domain NIN90_RS16575 PF00271 Helicase conserved C-terminal domain NIN90_RS16575 PF00270 DEAD/DEAH box helicase NIN90_RS16580 PF03060 Nitronate monooxygenase NIN90_RS16590 PF00194 Eukaryotic-type carbonic anhydrase NIN90_RS16600 PF00119 ATP synthase A chain NIN90_RS16605 PF00137 ATP synthase subunit C NIN90_RS16610 PF00430 ATP synthase B/B' CF(0) NIN90_RS16615 PF00213 ATP synthase delta (OSCP) subunit NIN90_RS16620 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NIN90_RS16620 PF00306 ATP synthase alpha/beta chain, C terminal domain NIN90_RS16620 PF02874 ATP synthase alpha/beta family, beta-barrel domain NIN90_RS16625 PF00231 ATP synthase NIN90_RS16630 PF02874 ATP synthase alpha/beta family, beta-barrel domain NIN90_RS16630 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NIN90_RS16635 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain NIN90_RS16635 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NIN90_RS16640 PF01758 Sodium Bile acid symporter family NIN90_RS16645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS16645 PF03466 LysR substrate binding domain NIN90_RS16660 PF08943 CsiD NIN90_RS16665 PF01266 FAD dependent oxidoreductase NIN90_RS16670 PF02753 Pili assembly chaperone PapD, C-terminal domain NIN90_RS16670 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain NIN90_RS16680 PF13953 PapC C-terminal domain NIN90_RS16680 PF13954 PapC N-terminal domain NIN90_RS16680 PF00577 Outer membrane usher protein NIN90_RS16685 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain NIN90_RS16685 PF02753 Pili assembly chaperone PapD, C-terminal domain NIN90_RS16695 PF00892 EamA-like transporter family NIN90_RS16700 PF14602 Hexapeptide repeat of succinyl-transferase NIN90_RS16700 PF12464 Maltose acetyltransferase NIN90_RS16710 PF02566 OsmC-like protein NIN90_RS16720 PF13438 Domain of unknown function (DUF4113) NIN90_RS16720 PF00817 impB/mucB/samB family NIN90_RS16720 PF11799 impB/mucB/samB family C-terminal domain NIN90_RS16720 PF11798 IMS family HHH motif NIN90_RS16725 PF00717 Peptidase S24-like NIN90_RS16735 PF01555 DNA methylase NIN90_RS16735 PF18273 Type III R-M EcoP15I C-terminal domain NIN90_RS16740 PF08774 VRR-NUC domain NIN90_RS16740 PF04851 Type III restriction enzyme, res subunit NIN90_RS16775 PF13737 Transposase DDE domain NIN90_RS17015 PF02086 D12 class N6 adenine-specific DNA methyltransferase NIN90_RS17070 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NIN90_RS17075 PF00563 EAL domain NIN90_RS17075 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS17075 PF03707 Bacterial signalling protein N terminal repeat NIN90_RS17080 PF00072 Response regulator receiver domain NIN90_RS17080 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NIN90_RS17080 PF01627 Hpt domain NIN90_RS17080 PF00672 HAMP domain NIN90_RS17080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIN90_RS17080 PF00512 His Kinase A (phospho-acceptor) domain NIN90_RS17095 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NIN90_RS17095 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NIN90_RS17105 PF12792 CSS motif domain associated with EAL NIN90_RS17105 PF00563 EAL domain NIN90_RS17110 PF00111 2Fe-2S iron-sulfur cluster binding domain NIN90_RS17110 PF00175 Oxidoreductase NAD-binding domain NIN90_RS17110 PF00970 Oxidoreductase FAD-binding domain NIN90_RS17115 PF03063 Prismane/CO dehydrogenase family NIN90_RS17135 PF01037 Lrp/AsnC ligand binding domain NIN90_RS17135 PF13404 AsnC-type helix-turn-helix domain NIN90_RS17140 PF13520 Amino acid permease NIN90_RS17145 PF02743 Cache domain NIN90_RS17145 PF00672 HAMP domain NIN90_RS17145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIN90_RS17150 PF01243 Pyridoxamine 5'-phosphate oxidase NIN90_RS17155 PF06228 Haem utilisation ChuX/HutX NIN90_RS17160 PF04055 Radical SAM superfamily NIN90_RS17165 PF03544 Gram-negative bacterial TonB protein C-terminal NIN90_RS17170 PF01618 MotA/TolQ/ExbB proton channel family NIN90_RS17175 PF02472 Biopolymer transport protein ExbD/TolR NIN90_RS17185 PF01032 FecCD transport family NIN90_RS17190 PF00005 ABC transporter NIN90_RS17220 PF03476 MOSC N-terminal beta barrel domain NIN90_RS17220 PF03473 MOSC domain NIN90_RS17220 PF00111 2Fe-2S iron-sulfur cluster binding domain NIN90_RS17225 PF01979 Amidohydrolase family NIN90_RS17230 PF05958 tRNA (Uracil-5-)-methyltransferase NIN90_RS17235 PF05661 Protein of unknown function (DUF808) NIN90_RS17255 PF08220 DeoR-like helix-turn-helix domain NIN90_RS17255 PF00455 DeoR C terminal sensor domain NIN90_RS17260 PF00196 Bacterial regulatory proteins, luxR family NIN90_RS17260 PF03472 Autoinducer binding domain NIN90_RS17265 PF00765 Autoinducer synthase NIN90_RS17280 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS17285 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS17285 PF14785 Maltose transport system permease protein MalF P2 domain NIN90_RS17290 PF01547 Bacterial extracellular solute-binding protein NIN90_RS17295 PF08402 TOBE domain NIN90_RS17295 PF00005 ABC transporter NIN90_RS17320 PF10614 Type VIII secretion system (T8SS), CsgF protein NIN90_RS17325 PF03783 Curli production assembly/transport component CsgG NIN90_RS17335 PF00155 Aminotransferase class I and II NIN90_RS17335 PF00392 Bacterial regulatory proteins, gntR family NIN90_RS17345 PF13302 Acetyltransferase (GNAT) domain NIN90_RS17365 PF00571 CBS domain NIN90_RS17370 PF09339 IclR helix-turn-helix domain NIN90_RS17370 PF01614 Bacterial transcriptional regulator NIN90_RS17380 PF10688 Bacterial inner membrane protein NIN90_RS17385 PF07883 Cupin domain NIN90_RS17400 PF03480 Bacterial extracellular solute-binding protein, family 7 NIN90_RS17410 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NIN90_RS17415 PF07470 Glycosyl Hydrolase Family 88 NIN90_RS17420 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NIN90_RS17420 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NIN90_RS17425 PF06134 L-rhamnose isomerase (RhaA) NIN90_RS17430 PF05336 L-rhamnose mutarotase NIN90_RS17435 PF00596 Class II Aldolase and Adducin N-terminal domain NIN90_RS17440 PF02311 AraC-like ligand binding domain NIN90_RS17440 PF12833 Helix-turn-helix domain NIN90_RS17445 PF00294 pfkB family carbohydrate kinase NIN90_RS17450 PF01081 KDPG and KHG aldolase NIN90_RS17455 PF01095 Pectinesterase NIN90_RS17460 PF12729 Four helix bundle sensory module for signal transduction NIN90_RS17460 PF00672 HAMP domain NIN90_RS17460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIN90_RS17465 PF13229 Right handed beta helix region NIN90_RS17475 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS17480 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS17485 PF00005 ABC transporter NIN90_RS17485 PF17912 MalK OB fold domain NIN90_RS17485 PF03459 TOBE domain NIN90_RS17490 PF01547 Bacterial extracellular solute-binding protein NIN90_RS17495 PF06917 Periplasmic pectate lyase NIN90_RS17500 PF01554 MatE NIN90_RS17505 PF00474 Sodium:solute symporter family NIN90_RS17510 PF14583 Oligogalacturonate lyase NIN90_RS17515 PF01906 Putative heavy-metal-binding NIN90_RS17520 PF00196 Bacterial regulatory proteins, luxR family NIN90_RS17525 PF01037 Lrp/AsnC ligand binding domain NIN90_RS17530 PF00892 EamA-like transporter family NIN90_RS17535 PF00440 Bacterial regulatory proteins, tetR family NIN90_RS17545 PF08502 LeuA allosteric (dimerisation) domain NIN90_RS17545 PF00682 HMGL-like NIN90_RS17555 PF00117 Glutamine amidotransferase class-I NIN90_RS17560 PF12852 Cupin NIN90_RS17560 PF12833 Helix-turn-helix domain NIN90_RS17565 PF01042 Endoribonuclease L-PSP NIN90_RS17575 PF13537 Glutamine amidotransferase domain NIN90_RS17575 PF00733 Asparagine synthase NIN90_RS17580 PF00925 GTP cyclohydrolase II NIN90_RS17580 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NIN90_RS17585 PF00535 Glycosyl transferase family 2 NIN90_RS17615 PF01584 CheW-like domain NIN90_RS17615 PF00072 Response regulator receiver domain NIN90_RS17620 PF04237 YjbR NIN90_RS17625 PF01047 MarR family NIN90_RS17635 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS17650 PF01610 Transposase NIN90_RS17650 PF13542 Helix-turn-helix domain of transposase family ISL3 NIN90_RS17650 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NIN90_RS17660 PF00563 EAL domain NIN90_RS17660 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS17660 PF03707 Bacterial signalling protein N terminal repeat NIN90_RS17680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS17680 PF03466 LysR substrate binding domain NIN90_RS17685 PF00563 EAL domain NIN90_RS17685 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS17685 PF03707 Bacterial signalling protein N terminal repeat NIN90_RS17695 PF02678 Pirin NIN90_RS17695 PF05726 Pirin C-terminal cupin domain NIN90_RS17700 PF00072 Response regulator receiver domain NIN90_RS17700 PF00486 Transcriptional regulatory protein, C terminal NIN90_RS17705 PF00672 HAMP domain NIN90_RS17705 PF00512 His Kinase A (phospho-acceptor) domain NIN90_RS17705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIN90_RS17745 PF07724 AAA domain (Cdc48 subfamily) NIN90_RS17745 PF00004 ATPase family associated with various cellular activities (AAA) NIN90_RS17745 PF10431 C-terminal, D2-small domain, of ClpB protein NIN90_RS17745 PF17871 AAA lid domain NIN90_RS17770 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath NIN90_RS17805 PF04717 Type VI secretion system, phage-baseplate injector NIN90_RS17805 PF06715 Gp5 C-terminal repeat (3 copies) NIN90_RS17815 PF07690 Major Facilitator Superfamily NIN90_RS17825 PF06865 Pyrimidine/purine nucleoside phosphorylase NIN90_RS17835 PF02386 Cation transport protein NIN90_RS17840 PF02254 TrkA-N domain NIN90_RS17840 PF02080 TrkA-C domain NIN90_RS17845 PF00924 Mechanosensitive ion channel NIN90_RS17850 PF07690 Major Facilitator Superfamily NIN90_RS17855 PF12729 Four helix bundle sensory module for signal transduction NIN90_RS17855 PF00672 HAMP domain NIN90_RS17855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIN90_RS17860 PF05362 Lon protease (S16) C-terminal proteolytic domain NIN90_RS17860 PF13654 AAA domain NIN90_RS17870 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NIN90_RS17870 PF00005 ABC transporter NIN90_RS17875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS17875 PF03466 LysR substrate binding domain NIN90_RS17880 PF02652 L-lactate permease NIN90_RS17885 PF01070 FMN-dependent dehydrogenase NIN90_RS17895 PF03618 Kinase/pyrophosphorylase NIN90_RS17900 PF00391 PEP-utilising enzyme, mobile domain NIN90_RS17900 PF02896 PEP-utilising enzyme, TIM barrel domain NIN90_RS17900 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NIN90_RS17910 PF02627 Carboxymuconolactone decarboxylase family NIN90_RS17915 PF00291 Pyridoxal-phosphate dependent enzyme NIN90_RS17930 PF05656 Protein of unknown function (DUF805) NIN90_RS17945 PF01844 HNH endonuclease NIN90_RS17955 PF13673 Acetyltransferase (GNAT) domain NIN90_RS17955 PF13302 Acetyltransferase (GNAT) domain NIN90_RS17955 PF03352 Methyladenine glycosylase NIN90_RS17955 PF00117 Glutamine amidotransferase class-I NIN90_RS17955 PF00958 GMP synthase C terminal domain NIN90_RS17960 PF00557 Metallopeptidase family M24 NIN90_RS17975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS17975 PF03466 LysR substrate binding domain NIN90_RS17985 PF00005 ABC transporter NIN90_RS17990 PF01032 FecCD transport family NIN90_RS17995 PF01032 FecCD transport family NIN90_RS18000 PF01497 Periplasmic binding protein NIN90_RS18005 PF00593 TonB dependent receptor NIN90_RS18005 PF07715 TonB-dependent Receptor Plug Domain NIN90_RS18020 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NIN90_RS18025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS18025 PF03466 LysR substrate binding domain NIN90_RS18035 PF02001 Protein of unknown function DUF134 NIN90_RS18040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS18040 PF03466 LysR substrate binding domain NIN90_RS18045 PF00155 Aminotransferase class I and II NIN90_RS18050 PF00497 Bacterial extracellular solute-binding proteins, family 3 NIN90_RS18055 PF01047 MarR family NIN90_RS18060 PF00529 HlyD membrane-fusion protein of T1SS NIN90_RS18060 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NIN90_RS18070 PF00561 alpha/beta hydrolase fold NIN90_RS18080 PF12833 Helix-turn-helix domain NIN90_RS18080 PF07883 Cupin domain NIN90_RS18085 PF00375 Sodium:dicarboxylate symporter family NIN90_RS18090 PF03600 Citrate transporter NIN90_RS18100 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NIN90_RS18100 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NIN90_RS18105 PF12833 Helix-turn-helix domain NIN90_RS18105 PF00730 HhH-GPD superfamily base excision DNA repair protein NIN90_RS18105 PF06029 AlkA N-terminal domain NIN90_RS18105 PF02805 Metal binding domain of Ada NIN90_RS18110 PF07681 DoxX NIN90_RS18115 PF07969 Amidohydrolase family NIN90_RS18120 PF03466 LysR substrate binding domain NIN90_RS18120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS18140 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NIN90_RS18145 PF02225 PA domain NIN90_RS18145 PF04389 Peptidase family M28 NIN90_RS18155 PF01551 Peptidase family M23 NIN90_RS18155 PF04225 Opacity-associated protein A LysM-like domain NIN90_RS18160 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NIN90_RS18160 PF02378 Phosphotransferase system, EIIC NIN90_RS18160 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NIN90_RS18165 PF01232 Mannitol dehydrogenase Rossmann domain NIN90_RS18165 PF08125 Mannitol dehydrogenase C-terminal domain NIN90_RS18170 PF05068 Mannitol repressor NIN90_RS18175 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NIN90_RS18180 PF00158 Sigma-54 interaction domain NIN90_RS18180 PF00989 PAS fold NIN90_RS18180 PF02954 Bacterial regulatory protein, Fis family NIN90_RS18185 PF00391 PEP-utilising enzyme, mobile domain NIN90_RS18185 PF05524 PEP-utilising enzyme, N-terminal NIN90_RS18185 PF02896 PEP-utilising enzyme, TIM barrel domain NIN90_RS18190 PF02734 DAK2 domain NIN90_RS18195 PF02733 Dak1 domain NIN90_RS18200 PF00465 Iron-containing alcohol dehydrogenase NIN90_RS18220 PF12838 4Fe-4S dicluster domain NIN90_RS18220 PF00037 4Fe-4S binding domain NIN90_RS18225 PF02613 Nitrate reductase delta subunit NIN90_RS18230 PF04976 DMSO reductase anchor subunit (DmsC) NIN90_RS18235 PF13247 4Fe-4S dicluster domain NIN90_RS18235 PF12800 4Fe-4S binding domain NIN90_RS18240 PF00384 Molybdopterin oxidoreductase NIN90_RS18240 PF01568 Molydopterin dinucleotide binding domain NIN90_RS18240 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NIN90_RS18245 PF03099 Biotin/lipoate A/B protein ligase family NIN90_RS18245 PF10437 Bacterial lipoate protein ligase C-terminus NIN90_RS18250 PF00012 Hsp70 protein NIN90_RS18265 PF07733 Bacterial DNA polymerase III alpha NTPase domain NIN90_RS18265 PF00929 Exonuclease NIN90_RS18265 PF02811 PHP domain NIN90_RS18265 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NIN90_RS18265 PF14579 Helix-hairpin-helix motif NIN90_RS18270 PF00132 Bacterial transferase hexapeptide (six repeats) NIN90_RS18280 PF00497 Bacterial extracellular solute-binding proteins, family 3 NIN90_RS18310 PF01844 HNH endonuclease NIN90_RS18315 PF13599 Pentapeptide repeats (9 copies) NIN90_RS18325 PF02129 X-Pro dipeptidyl-peptidase (S15 family) NIN90_RS18330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS18330 PF03466 LysR substrate binding domain NIN90_RS18335 PF11975 Family 4 glycosyl hydrolase C-terminal domain NIN90_RS18335 PF02056 Family 4 glycosyl hydrolase NIN90_RS18340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS18340 PF03466 LysR substrate binding domain NIN90_RS18345 PF00106 short chain dehydrogenase NIN90_RS18350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS18350 PF03466 LysR substrate binding domain NIN90_RS18365 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS18365 PF07694 5TMR of 5TMR-LYT NIN90_RS18370 PF00392 Bacterial regulatory proteins, gntR family NIN90_RS18370 PF00155 Aminotransferase class I and II NIN90_RS18380 PF03733 Inner membrane component domain NIN90_RS18385 PF03992 Antibiotic biosynthesis monooxygenase NIN90_RS18400 PF12833 Helix-turn-helix domain NIN90_RS18405 PF00857 Isochorismatase family NIN90_RS18410 PF02311 AraC-like ligand binding domain NIN90_RS18410 PF12833 Helix-turn-helix domain NIN90_RS18415 PF00893 Small Multidrug Resistance protein NIN90_RS18420 PF13460 NAD(P)H-binding NIN90_RS18430 PF01266 FAD dependent oxidoreductase NIN90_RS18435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIN90_RS18435 PF08447 PAS fold NIN90_RS18435 PF13426 PAS domain NIN90_RS18440 PF00455 DeoR C terminal sensor domain NIN90_RS18440 PF08220 DeoR-like helix-turn-helix domain NIN90_RS18445 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NIN90_RS18445 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NIN90_RS18450 PF17042 Nucleotide-binding C-terminal domain NIN90_RS18450 PF07005 Sugar-binding N-terminal domain NIN90_RS18455 PF00596 Class II Aldolase and Adducin N-terminal domain NIN90_RS18460 PF01261 Xylose isomerase-like TIM barrel NIN90_RS18465 PF02447 GntP family permease NIN90_RS18470 PF01037 Lrp/AsnC ligand binding domain NIN90_RS18475 PF00266 Aminotransferase class-V NIN90_RS18480 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) NIN90_RS18485 PF00376 MerR family regulatory protein NIN90_RS18485 PF09278 MerR, DNA binding NIN90_RS18500 PF01266 FAD dependent oxidoreductase NIN90_RS18520 PF08241 Methyltransferase domain NIN90_RS18525 PF03466 LysR substrate binding domain NIN90_RS18525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS18535 PF00271 Helicase conserved C-terminal domain NIN90_RS18535 PF00270 DEAD/DEAH box helicase NIN90_RS18540 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NIN90_RS18545 PF00171 Aldehyde dehydrogenase family NIN90_RS18550 PF01037 Lrp/AsnC ligand binding domain NIN90_RS18555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIN90_RS18555 PF00672 HAMP domain NIN90_RS18555 PF02743 Cache domain NIN90_RS18565 PF00474 Sodium:solute symporter family NIN90_RS18575 PF14850 DNA-binding domain of Proline dehydrogenase NIN90_RS18575 PF00171 Aldehyde dehydrogenase family NIN90_RS18575 PF01619 Proline dehydrogenase NIN90_RS18575 PF18327 Proline utilization A proline dehydrogenase N-terminal domain NIN90_RS18580 PF12833 Helix-turn-helix domain NIN90_RS18590 PF03781 Sulfatase-modifying factor enzyme 1 NIN90_RS18595 PF00072 Response regulator receiver domain NIN90_RS18595 PF00196 Bacterial regulatory proteins, luxR family NIN90_RS18600 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region NIN90_RS18600 PF01243 Pyridoxamine 5'-phosphate oxidase NIN90_RS18610 PF00072 Response regulator receiver domain NIN90_RS18610 PF00486 Transcriptional regulatory protein, C terminal NIN90_RS18620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIN90_RS18620 PF00672 HAMP domain NIN90_RS18620 PF02743 Cache domain NIN90_RS18625 PF01339 CheB methylesterase NIN90_RS18625 PF00072 Response regulator receiver domain NIN90_RS18630 PF03975 CheD chemotactic sensory transduction NIN90_RS18635 PF01739 CheR methyltransferase, SAM binding domain NIN90_RS18635 PF03705 CheR methyltransferase, all-alpha domain NIN90_RS18640 PF00672 HAMP domain NIN90_RS18640 PF02203 Tar ligand binding domain homologue NIN90_RS18640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIN90_RS18645 PF01584 CheW-like domain NIN90_RS18650 PF01584 CheW-like domain NIN90_RS18655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIN90_RS18655 PF01627 Hpt domain NIN90_RS18655 PF09078 CheY binding NIN90_RS18655 PF01584 CheW-like domain NIN90_RS18655 PF02895 Signal transducing histidine kinase, homodimeric domain NIN90_RS18660 PF00072 Response regulator receiver domain NIN90_RS18670 PF05127 Helicase NIN90_RS18670 PF13718 GNAT acetyltransferase 2 NIN90_RS18675 PF13416 Bacterial extracellular solute-binding protein NIN90_RS18680 PF08775 ParB family NIN90_RS18680 PF02195 ParB-like nuclease domain NIN90_RS18685 PF13614 AAA domain NIN90_RS18685 PF18607 ParA helix turn helix domain NIN90_RS18705 PF01709 Transcriptional regulator NIN90_RS18715 PF03466 LysR substrate binding domain NIN90_RS18715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS18720 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NIN90_RS18720 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NIN90_RS18725 PF17200 Single Cache domain 2 NIN90_RS18725 PF00672 HAMP domain NIN90_RS18725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIN90_RS18735 PF06481 COX Aromatic Rich Motif NIN90_RS18735 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NIN90_RS18740 PF00115 Cytochrome C and Quinol oxidase polypeptide I NIN90_RS18745 PF00510 Cytochrome c oxidase subunit III NIN90_RS18750 PF03626 Prokaryotic Cytochrome C oxidase subunit IV NIN90_RS18755 PF01040 UbiA prenyltransferase family NIN90_RS18760 PF10928 Protein of unknown function (DUF2810) NIN90_RS18765 PF17874 MalT-like TPR region NIN90_RS18765 PF00196 Bacterial regulatory proteins, luxR family NIN90_RS18770 PF00343 Carbohydrate phosphorylase NIN90_RS18775 PF02446 4-alpha-glucanotransferase NIN90_RS18780 PF00128 Alpha amylase, catalytic domain NIN90_RS18780 PF02806 Alpha amylase, C-terminal all-beta domain NIN90_RS18780 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NIN90_RS18785 PF05638 Type VI secretion system effector, Hcp NIN90_RS18790 PF04717 Type VI secretion system, phage-baseplate injector NIN90_RS18835 PF01124 MAPEG family NIN90_RS18860 PF00939 Sodium:sulfate symporter transmembrane region NIN90_RS18865 PF13302 Acetyltransferase (GNAT) domain NIN90_RS18870 PF01966 HD domain NIN90_RS18875 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) NIN90_RS18880 PF01212 Beta-eliminating lyase NIN90_RS18885 PF08329 Chitinase A, N-terminal domain NIN90_RS18885 PF00704 Glycosyl hydrolases family 18 NIN90_RS18890 PF00392 Bacterial regulatory proteins, gntR family NIN90_RS18890 PF07702 UTRA domain NIN90_RS18895 PF00005 ABC transporter NIN90_RS18905 PF00672 HAMP domain NIN90_RS18905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIN90_RS18905 PF02743 Cache domain NIN90_RS18920 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NIN90_RS18920 PF01568 Molydopterin dinucleotide binding domain NIN90_RS18920 PF00384 Molybdopterin oxidoreductase NIN90_RS18920 PF12838 4Fe-4S dicluster domain NIN90_RS18920 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NIN90_RS18940 PF00005 ABC transporter NIN90_RS18940 PF00664 ABC transporter transmembrane region NIN90_RS18945 PF00128 Alpha amylase, catalytic domain NIN90_RS18945 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NIN90_RS18950 PF02264 LamB porin NIN90_RS18955 PF07148 Maltose operon periplasmic protein precursor (MalM) NIN90_RS18965 PF00375 Sodium:dicarboxylate symporter family NIN90_RS18970 PF03193 RsgA GTPase NIN90_RS18980 PF02630 SCO1/SenC NIN90_RS18995 PF03616 Sodium/glutamate symporter NIN90_RS19000 PF12945 Flagellar protein YcgR NIN90_RS19000 PF07238 PilZ domain NIN90_RS19030 PF00529 HlyD membrane-fusion protein of T1SS NIN90_RS19030 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NIN90_RS19035 PF11742 Protein of unknown function (DUF3302) NIN90_RS19040 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS19055 PF01048 Phosphorylase superfamily NIN90_RS19060 PF08349 Protein of unknown function (DUF1722) NIN90_RS19065 PF13411 MerR HTH family regulatory protein NIN90_RS19070 PF00875 DNA photolyase NIN90_RS19070 PF03441 FAD binding domain of DNA photolyase NIN90_RS19075 PF17969 L,D-transpeptidase C-terminal domain NIN90_RS19075 PF01476 LysM domain NIN90_RS19075 PF03734 L,D-transpeptidase catalytic domain NIN90_RS19085 PF00270 DEAD/DEAH box helicase NIN90_RS19085 PF00271 Helicase conserved C-terminal domain NIN90_RS19090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIN90_RS19090 PF00672 HAMP domain NIN90_RS19095 PF12849 PBP superfamily domain NIN90_RS19100 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS19105 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS19110 PF00005 ABC transporter NIN90_RS19115 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS19115 PF17152 Periplasmic sensor domain NIN90_RS19125 PF07670 Nucleoside recognition NIN90_RS19130 PF01740 STAS domain NIN90_RS19130 PF00916 Sulfate permease family NIN90_RS19145 PF01476 LysM domain NIN90_RS19145 PF08525 Opacity-associated protein A N-terminal motif NIN90_RS19145 PF01551 Peptidase family M23 NIN90_RS19150 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS19150 PF08447 PAS fold NIN90_RS19150 PF08448 PAS fold NIN90_RS19150 PF00563 EAL domain NIN90_RS19155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS19155 PF03466 LysR substrate binding domain NIN90_RS19160 PF07690 Major Facilitator Superfamily NIN90_RS19170 PF00462 Glutaredoxin NIN90_RS19175 PF00267 Gram-negative porin NIN90_RS19180 PF02566 OsmC-like protein NIN90_RS19185 PF01047 MarR family NIN90_RS19190 PF01557 Fumarylacetoacetate (FAA) hydrolase family NIN90_RS19210 PF01810 LysE type translocator NIN90_RS19220 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NIN90_RS19225 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NIN90_RS19225 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NIN90_RS19225 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NIN90_RS19225 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NIN90_RS19230 PF02790 Cytochrome C oxidase subunit II, transmembrane domain NIN90_RS19230 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NIN90_RS19235 PF00115 Cytochrome C and Quinol oxidase polypeptide I NIN90_RS19240 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 NIN90_RS19245 PF00510 Cytochrome c oxidase subunit III NIN90_RS19265 PF02628 Cytochrome oxidase assembly protein NIN90_RS19270 PF01040 UbiA prenyltransferase family NIN90_RS19275 PF12706 Beta-lactamase superfamily domain NIN90_RS19285 PF00793 DAHP synthetase I family NIN90_RS19290 PF01554 MatE NIN90_RS19295 PF00563 EAL domain NIN90_RS19295 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS19295 PF05231 MASE1 NIN90_RS19295 PF08447 PAS fold NIN90_RS19295 PF08448 PAS fold NIN90_RS19295 PF13426 PAS domain NIN90_RS19315 PF12833 Helix-turn-helix domain NIN90_RS19315 PF02311 AraC-like ligand binding domain NIN90_RS19320 PF02567 Phenazine biosynthesis-like protein NIN90_RS19330 PF00392 Bacterial regulatory proteins, gntR family NIN90_RS19330 PF00155 Aminotransferase class I and II NIN90_RS19335 PF00892 EamA-like transporter family NIN90_RS19340 PF07274 Protein of unknown function (DUF1440) NIN90_RS19345 PF00657 GDSL-like Lipase/Acylhydrolase NIN90_RS19350 PF12563 Hemolytic toxin N terminal NIN90_RS19350 PF16458 Beta-prism lectin NIN90_RS19350 PF07968 Leukocidin/Hemolysin toxin family NIN90_RS19365 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NIN90_RS19365 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NIN90_RS19370 PF02028 BCCT, betaine/carnitine/choline family transporter NIN90_RS19375 PF00455 DeoR C terminal sensor domain NIN90_RS19375 PF08220 DeoR-like helix-turn-helix domain NIN90_RS19380 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NIN90_RS19380 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NIN90_RS19385 PF03928 Haem-degrading NIN90_RS19390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIN90_RS19390 PF02743 Cache domain NIN90_RS19390 PF00672 HAMP domain NIN90_RS19395 PF00579 tRNA synthetases class I (W and Y) NIN90_RS19395 PF01479 S4 domain NIN90_RS19410 PF00581 Rhodanese-like domain NIN90_RS19430 PF07690 Major Facilitator Superfamily NIN90_RS19435 PF03466 LysR substrate binding domain NIN90_RS19435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS19440 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NIN90_RS19445 PF00248 Aldo/keto reductase family NIN90_RS19450 PF00563 EAL domain NIN90_RS19450 PF12792 CSS motif domain associated with EAL NIN90_RS19460 PF00005 ABC transporter NIN90_RS19460 PF08402 TOBE domain NIN90_RS19480 PF01547 Bacterial extracellular solute-binding protein NIN90_RS19485 PF07702 UTRA domain NIN90_RS19485 PF00392 Bacterial regulatory proteins, gntR family NIN90_RS19490 PF13419 Haloacid dehalogenase-like hydrolase NIN90_RS19495 PF00916 Sulfate permease family NIN90_RS19495 PF01740 STAS domain NIN90_RS19505 PF00107 Zinc-binding dehydrogenase NIN90_RS19505 PF16884 N-terminal domain of oxidoreductase NIN90_RS19510 PF16925 Tetracyclin repressor-like, C-terminal domain NIN90_RS19510 PF00440 Bacterial regulatory proteins, tetR family NIN90_RS19515 PF00849 RNA pseudouridylate synthase NIN90_RS19520 PF00892 EamA-like transporter family NIN90_RS19530 PF01047 MarR family NIN90_RS19535 PF01810 LysE type translocator NIN90_RS19540 PF01037 Lrp/AsnC ligand binding domain NIN90_RS19560 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath NIN90_RS19570 PF05947 Type VI secretion system, TssF NIN90_RS19590 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE NIN90_RS19600 PF10431 C-terminal, D2-small domain, of ClpB protein NIN90_RS19600 PF07724 AAA domain (Cdc48 subfamily) NIN90_RS19600 PF00004 ATPase family associated with various cellular activities (AAA) NIN90_RS19600 PF17871 AAA lid domain NIN90_RS19605 PF02954 Bacterial regulatory protein, Fis family NIN90_RS19605 PF00158 Sigma-54 interaction domain NIN90_RS19620 PF14331 ImcF-related N-terminal domain NIN90_RS19620 PF06761 Intracellular multiplication and human macrophage-killing NIN90_RS19620 PF06744 Type VI secretion protein IcmF C-terminal NIN90_RS19630 PF04717 Type VI secretion system, phage-baseplate injector NIN90_RS19645 PF13737 Transposase DDE domain NIN90_RS19695 PF01471 Putative peptidoglycan binding domain NIN90_RS19695 PF04717 Type VI secretion system, phage-baseplate injector NIN90_RS19710 PF05025 RbsD / FucU transport protein family NIN90_RS19715 PF00005 ABC transporter NIN90_RS19720 PF02653 Branched-chain amino acid transport system / permease component NIN90_RS19725 PF13407 Periplasmic binding protein domain NIN90_RS19730 PF00294 pfkB family carbohydrate kinase NIN90_RS19735 PF00356 Bacterial regulatory proteins, lacI family NIN90_RS19740 PF03466 LysR substrate binding domain NIN90_RS19740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS19745 PF01048 Phosphorylase superfamily NIN90_RS19750 PF03009 Glycerophosphoryl diester phosphodiesterase family NIN90_RS19755 PF07690 Major Facilitator Superfamily NIN90_RS19760 PF13188 PAS domain NIN90_RS19760 PF03707 Bacterial signalling protein N terminal repeat NIN90_RS19760 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS19760 PF00563 EAL domain NIN90_RS19765 PF00672 HAMP domain NIN90_RS19765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIN90_RS19765 PF17200 Single Cache domain 2 NIN90_RS19785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIN90_RS19785 PF02743 Cache domain NIN90_RS19785 PF00512 His Kinase A (phospho-acceptor) domain NIN90_RS19790 PF02954 Bacterial regulatory protein, Fis family NIN90_RS19790 PF00072 Response regulator receiver domain NIN90_RS19790 PF00158 Sigma-54 interaction domain NIN90_RS19805 PF01266 FAD dependent oxidoreductase NIN90_RS19815 PF12843 Putative quorum-sensing-regulated virulence factor NIN90_RS19820 PF00472 RF-1 domain NIN90_RS19825 PF00582 Universal stress protein family NIN90_RS19830 PF04320 Protein with unknown function (DUF469) NIN90_RS19840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS19840 PF03466 LysR substrate binding domain NIN90_RS19845 PF00497 Bacterial extracellular solute-binding proteins, family 3 NIN90_RS19850 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS19855 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS19865 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NIN90_RS19865 PF13378 Enolase C-terminal domain-like NIN90_RS19870 PF12833 Helix-turn-helix domain NIN90_RS19875 PF00202 Aminotransferase class-III NIN90_RS19880 PF04958 Arginine N-succinyltransferase beta subunit NIN90_RS19885 PF04958 Arginine N-succinyltransferase beta subunit NIN90_RS19890 PF00171 Aldehyde dehydrogenase family NIN90_RS19895 PF04996 Succinylarginine dihydrolase NIN90_RS19900 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family NIN90_RS19905 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS19905 PF00072 Response regulator receiver domain NIN90_RS19910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIN90_RS19910 PF00512 His Kinase A (phospho-acceptor) domain NIN90_RS19910 PF01627 Hpt domain NIN90_RS19910 PF00072 Response regulator receiver domain NIN90_RS19910 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NIN90_RS19910 PF00672 HAMP domain NIN90_RS19920 PF00563 EAL domain NIN90_RS19920 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS19935 PF07584 Aerotolerance regulator N-terminal NIN90_RS19935 PF13519 von Willebrand factor type A domain NIN90_RS19950 PF01882 Protein of unknown function DUF58 NIN90_RS19955 PF07726 ATPase family associated with various cellular activities (AAA) NIN90_RS19955 PF17863 AAA lid domain NIN90_RS19960 PF12729 Four helix bundle sensory module for signal transduction NIN90_RS19960 PF00672 HAMP domain NIN90_RS19960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIN90_RS19975 PF00128 Alpha amylase, catalytic domain NIN90_RS19985 PF01773 Na+ dependent nucleoside transporter N-terminus NIN90_RS19985 PF07662 Na+ dependent nucleoside transporter C-terminus NIN90_RS19985 PF07670 Nucleoside recognition NIN90_RS19990 PF01546 Peptidase family M20/M25/M40 NIN90_RS19990 PF07687 Peptidase dimerisation domain NIN90_RS20000 PF00158 Sigma-54 interaction domain NIN90_RS20000 PF01590 GAF domain NIN90_RS20005 PF00970 Oxidoreductase FAD-binding domain NIN90_RS20005 PF00042 Globin NIN90_RS20005 PF00175 Oxidoreductase NAD-binding domain NIN90_RS20010 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS20015 PF07152 YaeQ protein NIN90_RS20020 PF00313 'Cold-shock' DNA-binding domain NIN90_RS20025 PF03889 Alternative ribosome-rescue factor A NIN90_RS20045 PF00072 Response regulator receiver domain NIN90_RS20045 PF00486 Transcriptional regulatory protein, C terminal NIN90_RS20055 PF03707 Bacterial signalling protein N terminal repeat NIN90_RS20055 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS20055 PF00563 EAL domain NIN90_RS20060 PF00497 Bacterial extracellular solute-binding proteins, family 3 NIN90_RS20060 PF01627 Hpt domain NIN90_RS20060 PF00072 Response regulator receiver domain NIN90_RS20060 PF00989 PAS fold NIN90_RS20060 PF00512 His Kinase A (phospho-acceptor) domain NIN90_RS20060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIN90_RS20065 PF00196 Bacterial regulatory proteins, luxR family NIN90_RS20065 PF00072 Response regulator receiver domain NIN90_RS20070 PF00072 Response regulator receiver domain NIN90_RS20070 PF00486 Transcriptional regulatory protein, C terminal NIN90_RS20075 PF03853 YjeF-related protein N-terminus NIN90_RS20075 PF01256 Carbohydrate kinase NIN90_RS20080 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NIN90_RS20080 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NIN90_RS20090 PF00478 IMP dehydrogenase / GMP reductase domain NIN90_RS20100 PF03466 LysR substrate binding domain NIN90_RS20100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS20105 PF08241 Methyltransferase domain NIN90_RS20115 PF00501 AMP-binding enzyme NIN90_RS20135 PF00072 Response regulator receiver domain NIN90_RS20135 PF00486 Transcriptional regulatory protein, C terminal NIN90_RS20140 PF00512 His Kinase A (phospho-acceptor) domain NIN90_RS20140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIN90_RS20145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS20145 PF03466 LysR substrate binding domain NIN90_RS20150 PF00501 AMP-binding enzyme NIN90_RS20150 PF13193 AMP-binding enzyme C-terminal domain NIN90_RS20155 PF00351 Biopterin-dependent aromatic amino acid hydroxylase NIN90_RS20160 PF01329 Pterin 4 alpha carbinolamine dehydratase NIN90_RS20165 PF01554 MatE NIN90_RS20175 PF03741 Integral membrane protein TerC family NIN90_RS20180 PF02311 AraC-like ligand binding domain NIN90_RS20180 PF12833 Helix-turn-helix domain NIN90_RS20185 PF00583 Acetyltransferase (GNAT) family NIN90_RS20190 PF00202 Aminotransferase class-III NIN90_RS20195 PF06339 Ectoine synthase NIN90_RS20200 PF00696 Amino acid kinase family NIN90_RS20200 PF13840 ACT domain NIN90_RS20215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS20215 PF03466 LysR substrate binding domain NIN90_RS20225 PF11849 Domain of unknown function (DUF3369) NIN90_RS20230 PF00563 EAL domain NIN90_RS20230 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS20230 PF03707 Bacterial signalling protein N terminal repeat NIN90_RS20235 PF00490 Delta-aminolevulinic acid dehydratase NIN90_RS20245 PF00118 TCP-1/cpn60 chaperonin family NIN90_RS20250 PF00166 Chaperonin 10 Kd subunit NIN90_RS20255 PF00571 CBS domain NIN90_RS20255 PF01769 Divalent cation transporter NIN90_RS20255 PF03448 MgtE intracellular N domain NIN90_RS20265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIN90_RS20265 PF00672 HAMP domain NIN90_RS20275 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NIN90_RS20280 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS20285 PF00571 CBS domain NIN90_RS20285 PF00005 ABC transporter NIN90_RS20295 PF17944 Arginine decarboxylase C-terminal helical extension NIN90_RS20295 PF17810 Arginine decarboxylase helical bundle domain NIN90_RS20295 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NIN90_RS20300 PF00491 Arginase family NIN90_RS20305 PF01037 Lrp/AsnC ligand binding domain NIN90_RS20310 PF01053 Cys/Met metabolism PLP-dependent enzyme NIN90_RS20315 PF00497 Bacterial extracellular solute-binding proteins, family 3 NIN90_RS20320 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS20325 PF00005 ABC transporter NIN90_RS20330 PF07943 Penicillin-binding protein 5, C-terminal domain NIN90_RS20330 PF00768 D-alanyl-D-alanine carboxypeptidase NIN90_RS20345 PF00529 HlyD membrane-fusion protein of T1SS NIN90_RS20345 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NIN90_RS20350 PF04632 Fusaric acid resistance protein family NIN90_RS20355 PF00691 OmpA family NIN90_RS20355 PF05736 OprF membrane domain NIN90_RS20365 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain NIN90_RS20365 PF02753 Pili assembly chaperone PapD, C-terminal domain NIN90_RS20370 PF00577 Outer membrane usher protein NIN90_RS20370 PF13954 PapC N-terminal domain NIN90_RS20370 PF13953 PapC C-terminal domain NIN90_RS20410 PF00486 Transcriptional regulatory protein, C terminal NIN90_RS20410 PF00072 Response regulator receiver domain NIN90_RS20430 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NIN90_RS20430 PF12793 Sugar transport-related sRNA regulator N-term NIN90_RS20435 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NIN90_RS20435 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NIN90_RS20440 PF05651 Putative sugar diacid recognition NIN90_RS20440 PF17853 GGDEF-like domain NIN90_RS20440 PF13556 PucR C-terminal helix-turn-helix domain NIN90_RS20445 PF02447 GntP family permease NIN90_RS20450 PF02595 Glycerate kinase family NIN90_RS20465 PF13520 Amino acid permease NIN90_RS20470 PF02574 Homocysteine S-methyltransferase NIN90_RS20470 PF02310 B12 binding domain NIN90_RS20470 PF02607 B12 binding domain NIN90_RS20470 PF02965 Vitamin B12 dependent methionine synthase, activation domain NIN90_RS20470 PF00809 Pterin binding enzyme NIN90_RS20485 PF03466 LysR substrate binding domain NIN90_RS20485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS20490 PF00672 HAMP domain NIN90_RS20490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIN90_RS20505 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NIN90_RS20505 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NIN90_RS20510 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NIN90_RS20515 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NIN90_RS20515 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NIN90_RS20520 PF01966 HD domain NIN90_RS20550 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NIN90_RS20555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS20555 PF03466 LysR substrate binding domain NIN90_RS20560 PF00158 Sigma-54 interaction domain NIN90_RS20560 PF02954 Bacterial regulatory protein, Fis family NIN90_RS20560 PF01590 GAF domain NIN90_RS20565 PF00171 Aldehyde dehydrogenase family NIN90_RS20570 PF00155 Aminotransferase class I and II NIN90_RS20575 PF00107 Zinc-binding dehydrogenase NIN90_RS20575 PF08240 Alcohol dehydrogenase GroES-like domain NIN90_RS20580 PF00313 'Cold-shock' DNA-binding domain NIN90_RS20600 PF00912 Transglycosylase NIN90_RS20605 PF00563 EAL domain NIN90_RS20605 PF12792 CSS motif domain associated with EAL NIN90_RS20615 PF00005 ABC transporter NIN90_RS20615 PF00664 ABC transporter transmembrane region NIN90_RS20620 PF00664 ABC transporter transmembrane region NIN90_RS20620 PF00005 ABC transporter NIN90_RS20630 PF02110 Hydroxyethylthiazole kinase family NIN90_RS20635 PF03070 TENA/THI-4/PQQC family NIN90_RS20640 PF09084 NMT1/THI5 like NIN90_RS20645 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS20650 PF00005 ABC transporter NIN90_RS20655 PF08543 Phosphomethylpyrimidine kinase NIN90_RS20675 PF03922 OmpW family NIN90_RS20680 PF04151 Bacterial pre-peptidase C-terminal domain NIN90_RS20680 PF01447 Thermolysin metallopeptidase, catalytic domain NIN90_RS20680 PF03413 Peptidase propeptide and YPEB domain NIN90_RS20680 PF07504 Fungalysin/Thermolysin Propeptide Motif NIN90_RS20680 PF02868 Thermolysin metallopeptidase, alpha-helical domain NIN90_RS20685 PF00128 Alpha amylase, catalytic domain NIN90_RS20700 PF00248 Aldo/keto reductase family NIN90_RS20705 PF06580 Histidine kinase NIN90_RS20705 PF07694 5TMR of 5TMR-LYT NIN90_RS20710 PF00072 Response regulator receiver domain NIN90_RS20710 PF04397 LytTr DNA-binding domain NIN90_RS20715 PF03605 Anaerobic c4-dicarboxylate membrane transporter NIN90_RS20720 PF02540 NAD synthase NIN90_RS20735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIN90_RS20735 PF17200 Single Cache domain 2 NIN90_RS20735 PF00672 HAMP domain NIN90_RS20745 PF07690 Major Facilitator Superfamily NIN90_RS20765 PF13404 AsnC-type helix-turn-helix domain NIN90_RS20765 PF01037 Lrp/AsnC ligand binding domain NIN90_RS20770 PF12729 Four helix bundle sensory module for signal transduction NIN90_RS20770 PF00672 HAMP domain NIN90_RS20770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIN90_RS20775 PF00561 alpha/beta hydrolase fold NIN90_RS20780 PF03280 Proteobacterial lipase chaperone protein NIN90_RS20785 PF00801 PKD domain NIN90_RS20785 PF05547 Immune inhibitor A peptidase M6 NIN90_RS20805 PF01032 FecCD transport family NIN90_RS20810 PF01032 FecCD transport family NIN90_RS20815 PF00005 ABC transporter NIN90_RS20820 PF12833 Helix-turn-helix domain NIN90_RS20825 PF00593 TonB dependent receptor NIN90_RS20825 PF07715 TonB-dependent Receptor Plug Domain NIN90_RS20835 PF00871 Acetokinase family NIN90_RS20840 PF12833 Helix-turn-helix domain NIN90_RS20840 PF02311 AraC-like ligand binding domain NIN90_RS20860 PF01145 SPFH domain / Band 7 family NIN90_RS20860 PF16200 C-terminal region of band_7 NIN90_RS20870 PF00296 Luciferase-like monooxygenase NIN90_RS20875 PF03466 LysR substrate binding domain NIN90_RS20875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS20885 PF02634 FdhD/NarQ family NIN90_RS20890 PF03466 LysR substrate binding domain NIN90_RS20890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS20895 PF01062 Bestrophin, RFP-TM, chloride channel NIN90_RS20900 PF00384 Molybdopterin oxidoreductase NIN90_RS20905 PF01654 Cytochrome bd terminal oxidase subunit I NIN90_RS20910 PF02322 Cytochrome bd terminal oxidase subunit II NIN90_RS20915 PF04198 Putative sugar-binding domain NIN90_RS20915 PF00325 Bacterial regulatory proteins, crp family NIN90_RS20920 PF01232 Mannitol dehydrogenase Rossmann domain NIN90_RS20920 PF08125 Mannitol dehydrogenase C-terminal domain NIN90_RS20925 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NIN90_RS20925 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NIN90_RS20930 PF07690 Major Facilitator Superfamily NIN90_RS20935 PF13419 Haloacid dehalogenase-like hydrolase NIN90_RS20940 PF00881 Nitroreductase family NIN90_RS20950 PF02028 BCCT, betaine/carnitine/choline family transporter NIN90_RS20955 PF03466 LysR substrate binding domain NIN90_RS20955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS20960 PF00842 Alanine racemase, C-terminal domain NIN90_RS20960 PF01168 Alanine racemase, N-terminal domain NIN90_RS20965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIN90_RS20965 PF00672 HAMP domain NIN90_RS20970 PF00005 ABC transporter NIN90_RS20975 PF01497 Periplasmic binding protein NIN90_RS20980 PF01032 FecCD transport family NIN90_RS20990 PF00593 TonB dependent receptor NIN90_RS20990 PF07715 TonB-dependent Receptor Plug Domain NIN90_RS21005 PF00005 ABC transporter NIN90_RS21010 PF00497 Bacterial extracellular solute-binding proteins, family 3 NIN90_RS21015 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS21020 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS21025 PF02028 BCCT, betaine/carnitine/choline family transporter NIN90_RS21030 PF04324 BFD-like [2Fe-2S] binding domain NIN90_RS21030 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NIN90_RS21030 PF07992 Pyridine nucleotide-disulphide oxidoreductase NIN90_RS21030 PF18267 Rubredoxin NAD+ reductase C-terminal domain NIN90_RS21030 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NIN90_RS21035 PF13806 Rieske-like [2Fe-2S] domain NIN90_RS21045 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NIN90_RS21045 PF14824 Sirohaem biosynthesis protein central NIN90_RS21045 PF10414 Sirohaem synthase dimerisation region NIN90_RS21065 PF11756 Nitrous oxide-stimulated promoter NIN90_RS21070 PF07690 Major Facilitator Superfamily NIN90_RS21075 PF00085 Thioredoxin NIN90_RS21080 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NIN90_RS21080 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NIN90_RS21085 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NIN90_RS21090 PF00873 AcrB/AcrD/AcrF family NIN90_RS21110 PF18412 Outer-membrane lipoprotein Wza C-terminal domain NIN90_RS21110 PF10531 SLBB domain NIN90_RS21110 PF02563 Polysaccharide biosynthesis/export protein NIN90_RS21135 PF00534 Glycosyl transferases group 1 NIN90_RS21135 PF13439 Glycosyltransferase Family 4 NIN90_RS21155 PF02754 Cysteine-rich domain NIN90_RS21155 PF13183 4Fe-4S dicluster domain NIN90_RS21160 PF00890 FAD binding domain NIN90_RS21165 PF01266 FAD dependent oxidoreductase NIN90_RS21165 PF04324 BFD-like [2Fe-2S] binding domain NIN90_RS21170 PF00230 Major intrinsic protein NIN90_RS21175 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NIN90_RS21175 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NIN90_RS21180 PF10688 Bacterial inner membrane protein NIN90_RS21215 PF04984 Phage tail sheath protein subtilisin-like domain NIN90_RS21215 PF17482 Phage tail sheath C-terminal domain NIN90_RS21260 PF02661 Fic/DOC family NIN90_RS21345 PF05840 Bacteriophage replication gene A protein (GPA) NIN90_RS21370 PF06892 Phage regulatory protein CII (CP76) NIN90_RS21420 PF00589 Phage integrase family NIN90_RS21420 PF02899 Phage integrase, N-terminal SAM-like domain NIN90_RS21425 PF04363 Protein of unknown function (DUF496) NIN90_RS21435 PF04337 Protein of unknown function, DUF480 NIN90_RS21440 PF01541 GIY-YIG catalytic domain NIN90_RS21445 PF13407 Periplasmic binding protein domain NIN90_RS21450 PF09308 LuxQ, periplasmic NIN90_RS21450 PF00072 Response regulator receiver domain NIN90_RS21450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIN90_RS21450 PF00512 His Kinase A (phospho-acceptor) domain NIN90_RS21470 PF07685 CobB/CobQ-like glutamine amidotransferase domain NIN90_RS21470 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NIN90_RS21480 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS21485 PF03459 TOBE domain NIN90_RS21485 PF00005 ABC transporter NIN90_RS21505 PF12805 FUSC-like inner membrane protein yccS NIN90_RS21510 PF00664 ABC transporter transmembrane region NIN90_RS21510 PF00005 ABC transporter NIN90_RS21510 PF03412 Peptidase C39 family NIN90_RS21525 PF00529 HlyD membrane-fusion protein of T1SS NIN90_RS21545 PF00580 UvrD/REP helicase N-terminal domain NIN90_RS21545 PF12462 DNA helicase IV / RNA helicase N terminal NIN90_RS21545 PF13361 UvrD-like helicase C-terminal domain NIN90_RS21550 PF00857 Isochorismatase family NIN90_RS21555 PF02142 MGS-like domain NIN90_RS21560 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NIN90_RS21565 PF00672 HAMP domain NIN90_RS21565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIN90_RS21565 PF00512 His Kinase A (phospho-acceptor) domain NIN90_RS21565 PF01627 Hpt domain NIN90_RS21565 PF00072 Response regulator receiver domain NIN90_RS21575 PF00465 Iron-containing alcohol dehydrogenase NIN90_RS21580 PF12833 Helix-turn-helix domain NIN90_RS21580 PF06719 AraC-type transcriptional regulator N-terminus NIN90_RS21585 PF00704 Glycosyl hydrolases family 18 NIN90_RS21585 PF06483 Chitinase C NIN90_RS21590 PF00483 Nucleotidyl transferase NIN90_RS21595 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS21615 PF02355 Protein export membrane protein NIN90_RS21615 PF13721 SecD export protein N-terminal TM region NIN90_RS21615 PF07549 SecD/SecF GG Motif NIN90_RS21620 PF02355 Protein export membrane protein NIN90_RS21620 PF07549 SecD/SecF GG Motif NIN90_RS21625 PF00106 short chain dehydrogenase NIN90_RS21630 PF00108 Thiolase, N-terminal domain NIN90_RS21630 PF02803 Thiolase, C-terminal domain NIN90_RS21640 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus NIN90_RS21640 PF00561 alpha/beta hydrolase fold NIN90_RS21650 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NIN90_RS21660 PF03264 NapC/NirT cytochrome c family, N-terminal region NIN90_RS21665 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) NIN90_RS21670 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NIN90_RS21670 PF00384 Molybdopterin oxidoreductase NIN90_RS21670 PF01568 Molydopterin dinucleotide binding domain NIN90_RS21685 PF00672 HAMP domain NIN90_RS21685 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term NIN90_RS21685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIN90_RS21685 PF07730 Histidine kinase NIN90_RS21690 PF00072 Response regulator receiver domain NIN90_RS21690 PF00196 Bacterial regulatory proteins, luxR family NIN90_RS21695 PF03606 C4-dicarboxylate anaerobic carrier NIN90_RS21710 PF07690 Major Facilitator Superfamily NIN90_RS21715 PF00672 HAMP domain NIN90_RS21715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIN90_RS21715 PF12729 Four helix bundle sensory module for signal transduction NIN90_RS21720 PF13419 Haloacid dehalogenase-like hydrolase NIN90_RS21725 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NIN90_RS21725 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NIN90_RS21735 PF05736 OprF membrane domain NIN90_RS21735 PF00691 OmpA family NIN90_RS21740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIN90_RS21740 PF08447 PAS fold NIN90_RS21745 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NIN90_RS21745 PF01266 FAD dependent oxidoreductase NIN90_RS21755 PF00486 Transcriptional regulatory protein, C terminal NIN90_RS21755 PF00072 Response regulator receiver domain NIN90_RS21760 PF01810 LysE type translocator NIN90_RS21765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS21765 PF03466 LysR substrate binding domain NIN90_RS21770 PF13533 Biotin-lipoyl like NIN90_RS21790 PF03466 LysR substrate binding domain NIN90_RS21790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS21810 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NIN90_RS21815 PF12146 Serine aminopeptidase, S33 NIN90_RS21820 PF12146 Serine aminopeptidase, S33 NIN90_RS21830 PF06719 AraC-type transcriptional regulator N-terminus NIN90_RS21830 PF12833 Helix-turn-helix domain NIN90_RS21840 PF13673 Acetyltransferase (GNAT) domain NIN90_RS21845 PF03466 LysR substrate binding domain NIN90_RS21845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS21850 PF12146 Serine aminopeptidase, S33 NIN90_RS21895 PF07992 Pyridine nucleotide-disulphide oxidoreductase NIN90_RS21895 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NIN90_RS21910 PF04143 Sulphur transport NIN90_RS21920 PF00529 HlyD membrane-fusion protein of T1SS NIN90_RS21920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NIN90_RS21925 PF00873 AcrB/AcrD/AcrF family NIN90_RS21935 PF03477 ATP cone domain NIN90_RS21935 PF13597 Anaerobic ribonucleoside-triphosphate reductase NIN90_RS21945 PF00155 Aminotransferase class I and II NIN90_RS21950 PF08443 RimK-like ATP-grasp domain NIN90_RS21950 PF18030 RimK PreATP-grasp domain NIN90_RS21955 PF02378 Phosphotransferase system, EIIC NIN90_RS21955 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NIN90_RS21960 PF00294 pfkB family carbohydrate kinase NIN90_RS21965 PF00381 PTS HPr component phosphorylation site NIN90_RS21965 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NIN90_RS21970 PF00356 Bacterial regulatory proteins, lacI family NIN90_RS21970 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NIN90_RS21975 PF12320 Type 5 capsule protein repressor C-terminal domain NIN90_RS21975 PF00149 Calcineurin-like phosphoesterase NIN90_RS21980 PF13476 AAA domain NIN90_RS21985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIN90_RS21985 PF00072 Response regulator receiver domain NIN90_RS21990 PF00155 Aminotransferase class I and II NIN90_RS22000 PF00654 Voltage gated chloride channel NIN90_RS22005 PF02492 CobW/HypB/UreG, nucleotide-binding domain NIN90_RS22005 PF07683 Cobalamin synthesis protein cobW C-terminal domain NIN90_RS22010 PF01926 50S ribosome-binding GTPase NIN90_RS22015 PF01047 MarR family NIN90_RS22025 PF00107 Zinc-binding dehydrogenase NIN90_RS22025 PF08240 Alcohol dehydrogenase GroES-like domain NIN90_RS22030 PF12833 Helix-turn-helix domain NIN90_RS22030 PF02311 AraC-like ligand binding domain NIN90_RS22040 PF00072 Response regulator receiver domain NIN90_RS22045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIN90_RS22045 PF01627 Hpt domain NIN90_RS22045 PF00072 Response regulator receiver domain NIN90_RS22045 PF00672 HAMP domain NIN90_RS22045 PF00512 His Kinase A (phospho-acceptor) domain NIN90_RS22045 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NIN90_RS22050 PF02634 FdhD/NarQ family NIN90_RS22055 PF00384 Molybdopterin oxidoreductase NIN90_RS22065 PF00563 EAL domain NIN90_RS22065 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS22065 PF13426 PAS domain NIN90_RS22090 PF01292 Prokaryotic cytochrome b561 NIN90_RS22095 PF04264 YceI-like domain NIN90_RS22100 PF01226 Formate/nitrite transporter NIN90_RS22105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS22105 PF03466 LysR substrate binding domain NIN90_RS22110 PF06496 Protein of unknown function (DUF1097) NIN90_RS22115 PF11398 Protein of unknown function (DUF2813) NIN90_RS22120 PF02872 5'-nucleotidase, C-terminal domain NIN90_RS22120 PF00149 Calcineurin-like phosphoesterase NIN90_RS22125 PF03741 Integral membrane protein TerC family NIN90_RS22135 PF08274 PhnA Zinc-Ribbon NIN90_RS22135 PF03831 PhnA domain NIN90_RS22140 PF01435 Peptidase family M48 NIN90_RS22145 PF03061 Thioesterase superfamily NIN90_RS22155 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NIN90_RS22155 PF12793 Sugar transport-related sRNA regulator N-term NIN90_RS22165 PF07715 TonB-dependent Receptor Plug Domain NIN90_RS22165 PF00593 TonB dependent receptor NIN90_RS22170 PF03466 LysR substrate binding domain NIN90_RS22170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS22175 PF00583 Acetyltransferase (GNAT) family NIN90_RS22175 PF13380 CoA binding domain NIN90_RS22175 PF13607 Succinyl-CoA ligase like flavodoxin domain NIN90_RS22185 PF07478 D-ala D-ala ligase C-terminus NIN90_RS22185 PF01820 D-ala D-ala ligase N-terminus NIN90_RS22200 PF01253 Translation initiation factor SUI1 NIN90_RS22205 PF03701 Uncharacterised protein family (UPF0181) NIN90_RS22220 PF00072 Response regulator receiver domain NIN90_RS22220 PF00486 Transcriptional regulatory protein, C terminal NIN90_RS22230 PF02233 NAD(P) transhydrogenase beta subunit NIN90_RS22235 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NIN90_RS22235 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NIN90_RS22235 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NIN90_RS22250 PF17156 Gammaproteobacterial periplasmic sensor domain NIN90_RS22250 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS22260 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS22270 PF08362 YcdC-like protein, C-terminal region NIN90_RS22270 PF00440 Bacterial regulatory proteins, tetR family NIN90_RS22275 PF00005 ABC transporter NIN90_RS22280 PF02653 Branched-chain amino acid transport system / permease component NIN90_RS22285 PF02653 Branched-chain amino acid transport system / permease component NIN90_RS22290 PF02608 ABC transporter substrate-binding protein PnrA-like NIN90_RS22295 PF00111 2Fe-2S iron-sulfur cluster binding domain NIN90_RS22295 PF01799 [2Fe-2S] binding domain NIN90_RS22310 PF01014 Uricase NIN90_RS22310 PF09349 OHCU decarboxylase NIN90_RS22315 PF00576 HIUase/Transthyretin family NIN90_RS22320 PF01979 Amidohydrolase family NIN90_RS22340 PF07687 Peptidase dimerisation domain NIN90_RS22340 PF01546 Peptidase family M20/M25/M40 NIN90_RS22345 PF00266 Aminotransferase class-V NIN90_RS22355 PF01425 Amidase NIN90_RS22360 PF13593 SBF-like CPA transporter family (DUF4137) NIN90_RS22370 PF00005 ABC transporter NIN90_RS22375 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS22380 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS22395 PF01177 Asp/Glu/Hydantoin racemase NIN90_RS22405 PF00860 Permease family NIN90_RS22410 PF01641 SelR domain NIN90_RS22410 PF01625 Peptide methionine sulfoxide reductase NIN90_RS22415 PF12833 Helix-turn-helix domain NIN90_RS22415 PF01497 Periplasmic binding protein NIN90_RS22420 PF00155 Aminotransferase class I and II NIN90_RS22450 PF00486 Transcriptional regulatory protein, C terminal NIN90_RS22455 PF02129 X-Pro dipeptidyl-peptidase (S15 family) NIN90_RS22480 PF18081 Fanconi anemia-associated nuclease SAP domain NIN90_RS22480 PF08774 VRR-NUC domain NIN90_RS22495 PF05525 Branched-chain amino acid transport protein NIN90_RS22500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIN90_RS22500 PF00672 HAMP domain NIN90_RS22500 PF02743 Cache domain NIN90_RS22520 PF17155 Gammaproteobacterial periplasmic sensor domain NIN90_RS22520 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS22525 PF00196 Bacterial regulatory proteins, luxR family NIN90_RS22525 PF00072 Response regulator receiver domain NIN90_RS22530 PF00563 EAL domain NIN90_RS22530 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS22530 PF00360 Phytochrome region NIN90_RS22530 PF01590 GAF domain NIN90_RS22535 PF00072 Response regulator receiver domain NIN90_RS22535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIN90_RS22535 PF00512 His Kinase A (phospho-acceptor) domain NIN90_RS22535 PF09456 RcsC Alpha-Beta-Loop (ABL) NIN90_RS22550 PF00132 Bacterial transferase hexapeptide (six repeats) NIN90_RS22550 PF03479 Plants and Prokaryotes Conserved (PCC) domain NIN90_RS22550 PF12804 MobA-like NTP transferase domain NIN90_RS22555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NIN90_RS22555 PF00005 ABC transporter NIN90_RS22560 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS22560 PF12911 N-terminal TM domain of oligopeptide transport permease C NIN90_RS22565 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS22570 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NIN90_RS22595 PF00246 Zinc carboxypeptidase NIN90_RS22595 PF18027 Cytosolic carboxypeptidase N-terminal domain NIN90_RS22605 PF00392 Bacterial regulatory proteins, gntR family NIN90_RS22605 PF07702 UTRA domain NIN90_RS22610 PF00528 Binding-protein-dependent transport system inner membrane component NIN90_RS22615 PF00005 ABC transporter NIN90_RS22625 PF00266 Aminotransferase class-V NIN90_RS22630 PF00202 Aminotransferase class-III NIN90_RS22635 PF13419 Haloacid dehalogenase-like hydrolase NIN90_RS22645 PF14760 Rnk N-terminus NIN90_RS22645 PF01272 Transcription elongation factor, GreA/GreB, C-term NIN90_RS22650 PF13419 Haloacid dehalogenase-like hydrolase NIN90_RS22655 PF03466 LysR substrate binding domain NIN90_RS22655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS22670 PF01268 Formate--tetrahydrofolate ligase NIN90_RS22675 PF01641 SelR domain NIN90_RS22675 PF01625 Peptide methionine sulfoxide reductase NIN90_RS22680 PF01227 GTP cyclohydrolase I NIN90_RS22685 PF03454 MoeA C-terminal region (domain IV) NIN90_RS22685 PF03453 MoeA N-terminal region (domain I and II) NIN90_RS22685 PF00994 Probable molybdopterin binding domain NIN90_RS22690 PF00899 ThiF family NIN90_RS22695 PF00581 Rhodanese-like domain NIN90_RS22705 PF00923 Transaldolase/Fructose-6-phosphate aldolase NIN90_RS22710 PF02779 Transketolase, pyrimidine binding domain NIN90_RS22710 PF00456 Transketolase, thiamine diphosphate binding domain NIN90_RS22710 PF02780 Transketolase, C-terminal domain NIN90_RS22720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS22720 PF03466 LysR substrate binding domain NIN90_RS22730 PF00440 Bacterial regulatory proteins, tetR family NIN90_RS22735 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NIN90_RS22735 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NIN90_RS22740 PF01596 O-methyltransferase NIN90_RS22750 PF01810 LysE type translocator NIN90_RS22765 PF00857 Isochorismatase family NIN90_RS22775 PF00583 Acetyltransferase (GNAT) family NIN90_RS22785 PF01810 LysE type translocator NIN90_RS22790 PF00293 NUDIX domain NIN90_RS22795 PF06942 GlpM protein NIN90_RS22800 PF02272 DHHA1 domain NIN90_RS22800 PF01411 tRNA synthetases class II (A) NIN90_RS22800 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NIN90_RS22825 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NIN90_RS22840 PF01928 CYTH domain NIN90_RS22845 PF00583 Acetyltransferase (GNAT) family NIN90_RS22870 PF13649 Methyltransferase domain NIN90_RS22880 PF00462 Glutaredoxin NIN90_RS22880 PF08534 Redoxin NIN90_RS22890 PF00892 EamA-like transporter family NIN90_RS22900 PF02627 Carboxymuconolactone decarboxylase family NIN90_RS22905 PF13411 MerR HTH family regulatory protein NIN90_RS22945 PF09905 DNA-binding protein VF530 NIN90_RS22950 PF13473 Cupredoxin-like domain NIN90_RS22955 PF03239 Iron permease FTR1 family NIN90_RS22960 PF00453 Ribosomal protein L20 NIN90_RS22965 PF01632 Ribosomal protein L35 NIN90_RS22970 PF00707 Translation initiation factor IF-3, C-terminal domain NIN90_RS22970 PF05198 Translation initiation factor IF-3, N-terminal domain NIN90_RS22975 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NIN90_RS22975 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NIN90_RS22975 PF02824 TGS domain NIN90_RS22975 PF03129 Anticodon binding domain NIN90_RS22980 PF00271 Helicase conserved C-terminal domain NIN90_RS22980 PF03880 DbpA RNA binding domain NIN90_RS22980 PF00270 DEAD/DEAH box helicase NIN90_RS22985 PF00575 S1 RNA binding domain NIN90_RS22985 PF00773 RNB domain NIN90_RS22985 PF08206 Ribonuclease B OB domain NIN90_RS22995 PF12849 PBP superfamily domain NIN90_RS23000 PF01575 MaoC like domain NIN90_RS23005 PF03466 LysR substrate binding domain NIN90_RS23005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS23010 PF00709 Adenylosuccinate synthetase NIN90_RS23020 PF00202 Aminotransferase class-III NIN90_RS23030 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NIN90_RS23040 PF03480 Bacterial extracellular solute-binding protein, family 7 NIN90_RS23045 PF00171 Aldehyde dehydrogenase family NIN90_RS23050 PF03466 LysR substrate binding domain NIN90_RS23050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS23055 PF00501 AMP-binding enzyme NIN90_RS23055 PF13193 AMP-binding enzyme C-terminal domain NIN90_RS23060 PF04403 Paraquat-inducible protein A NIN90_RS23065 PF02470 MlaD protein NIN90_RS23080 PF14602 Hexapeptide repeat of succinyl-transferase NIN90_RS23080 PF12464 Maltose acetyltransferase NIN90_RS23085 PF00156 Phosphoribosyl transferase domain NIN90_RS23095 PF11412 Disulphide bond corrector protein DsbC NIN90_RS23095 PF02683 Cytochrome C biogenesis protein transmembrane region NIN90_RS23100 PF00578 AhpC/TSA family NIN90_RS23105 PF02525 Flavodoxin-like fold NIN90_RS23110 PF00155 Aminotransferase class I and II NIN90_RS23110 PF00392 Bacterial regulatory proteins, gntR family NIN90_RS23115 PF07992 Pyridine nucleotide-disulphide oxidoreductase NIN90_RS23130 PF00491 Arginase family NIN90_RS23440 PF01609 Transposase DDE domain NIN90_RS23440 PF13808 DDE_Tnp_1-associated NIN90_RS23470 PF01609 Transposase DDE domain NIN90_RS23470 PF13808 DDE_Tnp_1-associated NIN90_RS23600 PF02522 Aminoglycoside 3-N-acetyltransferase NIN90_RS23645 PF01343 Peptidase family S49 NIN90_RS23685 PF00565 Staphylococcal nuclease homologue NIN90_RS23690 PF00216 Bacterial DNA-binding protein NIN90_RS23750 PF01434 Peptidase family M41 NIN90_RS23750 PF17862 AAA+ lid domain NIN90_RS23750 PF00004 ATPase family associated with various cellular activities (AAA) NIN90_RS23795 PF04335 VirB8 protein NIN90_RS23805 PF03743 Bacterial conjugation TrbI-like protein NIN90_RS23810 PF00437 Type II/IV secretion system protein NIN90_RS23815 PF13396 Phospholipase_D-nuclease N-terminal NIN90_RS23815 PF13091 PLD-like domain NIN90_RS23835 PF02909 Tetracyclin repressor-like, C-terminal domain NIN90_RS23835 PF00440 Bacterial regulatory proteins, tetR family NIN90_RS23840 PF07690 Major Facilitator Superfamily NIN90_RS23845 PF00107 Zinc-binding dehydrogenase NIN90_RS23845 PF08240 Alcohol dehydrogenase GroES-like domain NIN90_RS23855 PF13610 DDE domain NIN90_RS23865 PF13610 DDE domain NIN90_RS23875 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ NIN90_RS23880 PF02796 Helix-turn-helix domain of resolvase NIN90_RS23880 PF00239 Resolvase, N terminal domain NIN90_RS23885 PF02796 Helix-turn-helix domain of resolvase NIN90_RS23885 PF00239 Resolvase, N terminal domain NIN90_RS23905 PF07690 Major Facilitator Superfamily NIN90_RS23910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIN90_RS23910 PF03466 LysR substrate binding domain NIN90_RS23925 PF00809 Pterin binding enzyme NIN90_RS23935 PF13614 AAA domain NIN90_RS23940 PF08535 KorB domain NIN90_RS23940 PF06613 KorB C-terminal beta-barrel domain NIN90_RS23940 PF02195 ParB-like nuclease domain NIN90_RS23990 PF00145 C-5 cytosine-specific DNA methylase NIN90_RS24020 PF01131 DNA topoisomerase NIN90_RS24020 PF01751 Toprim domain NIN90_RS24070 PF00872 Transposase, Mutator family NIN90_RS24120 PF10411 Disulfide bond isomerase protein N-terminus NIN90_RS24120 PF13098 Thioredoxin-like domain NIN90_RS24145 PF08448 PAS fold NIN90_RS24145 PF08447 PAS fold NIN90_RS24145 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS24145 PF00563 EAL domain NIN90_RS24150 PF06834 TraU protein NIN90_RS24180 PF08406 CbbQ/NirQ/NorQ C-terminal NIN90_RS24180 PF07728 AAA domain (dynein-related subfamily) NIN90_RS24190 PF00436 Single-strand binding protein family NIN90_RS24235 PF00111 2Fe-2S iron-sulfur cluster binding domain NIN90_RS24375 PF02371 Transposase IS116/IS110/IS902 family NIN90_RS24375 PF01548 Transposase NIN90_RS24380 PF13700 Domain of unknown function (DUF4158) NIN90_RS24380 PF01526 Tn3 transposase DDE domain NIN90_RS24385 PF00239 Resolvase, N terminal domain NIN90_RS24385 PF02796 Helix-turn-helix domain of resolvase NIN90_RS24390 PF00589 Phage integrase family NIN90_RS24390 PF13495 Phage integrase, N-terminal SAM-like domain NIN90_RS24400 PF00186 Dihydrofolate reductase NIN90_RS24405 PF00893 Small Multidrug Resistance protein NIN90_RS24410 PF00809 Pterin binding enzyme NIN90_RS24425 PF13599 Pentapeptide repeats (9 copies) NIN90_RS24430 PF01844 HNH endonuclease NIN90_RS24465 PF00005 ABC transporter NIN90_RS24465 PF00664 ABC transporter transmembrane region NIN90_RS24490 PF00809 Pterin binding enzyme NIN90_RS24505 PF13610 DDE domain NIN90_RS24520 PF01636 Phosphotransferase enzyme family NIN90_RS24530 PF01548 Transposase NIN90_RS24530 PF02371 Transposase IS116/IS110/IS902 family NIN90_RS24535 PF01526 Tn3 transposase DDE domain NIN90_RS24535 PF13700 Domain of unknown function (DUF4158) NIN90_RS24540 PF02796 Helix-turn-helix domain of resolvase NIN90_RS24540 PF00239 Resolvase, N terminal domain NIN90_RS24545 PF00563 EAL domain NIN90_RS24545 PF00990 Diguanylate cyclase, GGDEF domain NIN90_RS24545 PF03707 Bacterial signalling protein N terminal repeat NIN90_RS24550 PF05052 MerE protein NIN90_RS24555 PF13411 MerR HTH family regulatory protein NIN90_RS24560 PF12324 Helix-turn-helix domain of alkylmercury lyase NIN90_RS24560 PF03243 Alkylmercury lyase NIN90_RS24565 PF00403 Heavy-metal-associated domain NIN90_RS24565 PF07992 Pyridine nucleotide-disulphide oxidoreductase NIN90_RS24565 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NIN90_RS24570 PF00403 Heavy-metal-associated domain NIN90_RS24575 PF02411 MerT mercuric transport protein NIN90_RS24580 PF00376 MerR family regulatory protein NIN90_RS24580 PF09278 MerR, DNA binding NIN90_RS24625 PF02899 Phage integrase, N-terminal SAM-like domain NIN90_RS24625 PF00589 Phage integrase family NIN90_RS24660 PF06122 Conjugative relaxosome accessory transposon protein