VFU_RS07655 e4665408db584debe054915980255519 435 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 109 1.8E-28 T 21-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 VFU_RS07655 e4665408db584debe054915980255519 435 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 230 411 4.0E-34 T 21-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VFU_RS07655 e4665408db584debe054915980255519 435 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 428 5.6E-172 T 21-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VFU_RS07655 e4665408db584debe054915980255519 435 SUPERFAMILY SSF46589 1 114 2.09E-26 T 21-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 VFU_RS07655 e4665408db584debe054915980255519 435 Gene3D G3DSA:1.10.287.40 1 106 5.9E-23 T 21-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 VFU_RS07655 e4665408db584debe054915980255519 435 PANTHER PTHR11778:SF0 1 434 2.5E-211 T 21-04-2016 VFU_RS07655 e4665408db584debe054915980255519 435 PANTHER PTHR11778 1 434 2.5E-211 T 21-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VFU_RS07655 e4665408db584debe054915980255519 435 SUPERFAMILY SSF55681 118 433 1.4E-97 T 21-04-2016 VFU_RS07655 e4665408db584debe054915980255519 435 Gene3D G3DSA:3.30.930.10 107 431 5.3E-139 T 21-04-2016 VFU_RS07655 e4665408db584debe054915980255519 435 PRINTS PR00981 Seryl-tRNA synthetase signature 287 300 1.980839E-33 T 21-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VFU_RS07655 e4665408db584debe054915980255519 435 PRINTS PR00981 Seryl-tRNA synthetase signature 344 360 1.980839E-33 T 21-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VFU_RS07655 e4665408db584debe054915980255519 435 PRINTS PR00981 Seryl-tRNA synthetase signature 327 340 1.980839E-33 T 21-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VFU_RS07655 e4665408db584debe054915980255519 435 PRINTS PR00981 Seryl-tRNA synthetase signature 362 378 1.980839E-33 T 21-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VFU_RS07655 e4665408db584debe054915980255519 435 PRINTS PR00981 Seryl-tRNA synthetase signature 275 287 1.980839E-33 T 21-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VFU_RS07655 e4665408db584debe054915980255519 435 PIRSF PIRSF001529 1 435 2.5E-189 T 21-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VFU_RS07655 e4665408db584debe054915980255519 435 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 433 39.959 T 21-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VFU_RS14855 d42a4c773a51ff35542625ef0b26f129 272 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 5 99 1.8E-24 T 21-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal VFU_RS14855 d42a4c773a51ff35542625ef0b26f129 272 SUPERFAMILY SSF48179 163 270 9.18E-30 T 21-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VFU_RS14855 d42a4c773a51ff35542625ef0b26f129 272 SUPERFAMILY SSF51735 4 160 2.1E-38 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS14855 d42a4c773a51ff35542625ef0b26f129 272 Gene3D G3DSA:1.10.3730.10 163 268 2.5E-29 T 21-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 VFU_RS14855 d42a4c773a51ff35542625ef0b26f129 272 PIRSF PIRSF000193 3 270 7.1E-77 T 21-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 VFU_RS14855 d42a4c773a51ff35542625ef0b26f129 272 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 268 1.0E-71 T 21-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 VFU_RS14855 d42a4c773a51ff35542625ef0b26f129 272 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 224 246 - T 21-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 VFU_RS14855 d42a4c773a51ff35542625ef0b26f129 272 PANTHER PTHR11645 1 270 2.9E-108 T 21-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 VFU_RS14855 d42a4c773a51ff35542625ef0b26f129 272 PANTHER PTHR11645:SF0 1 270 2.9E-108 T 21-04-2016 VFU_RS14855 d42a4c773a51ff35542625ef0b26f129 272 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 268 25.519 T 21-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 VFU_RS14855 d42a4c773a51ff35542625ef0b26f129 272 Gene3D G3DSA:3.40.50.720 2 160 2.7E-48 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS14855 d42a4c773a51ff35542625ef0b26f129 272 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 268 1.5E-29 T 21-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 VFU_RS09885 cc66c07380f9c8df6195064048077cb3 223 SUPERFAMILY SSF52172 2 122 1.15E-36 T 21-04-2016 IPR011006 CheY-like superfamily VFU_RS09885 cc66c07380f9c8df6195064048077cb3 223 PANTHER PTHR26402 1 220 1.1E-67 T 21-04-2016 VFU_RS09885 cc66c07380f9c8df6195064048077cb3 223 SMART SM00862 146 221 1.4E-16 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VFU_RS09885 cc66c07380f9c8df6195064048077cb3 223 SMART SM00448 1 112 4.4E-40 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS09885 cc66c07380f9c8df6195064048077cb3 223 Pfam PF00072 Response regulator receiver domain 4 112 1.7E-27 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS09885 cc66c07380f9c8df6195064048077cb3 223 Gene3D G3DSA:3.40.50.2300 2 123 3.4E-35 T 21-04-2016 VFU_RS09885 cc66c07380f9c8df6195064048077cb3 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 220 2.8E-17 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VFU_RS09885 cc66c07380f9c8df6195064048077cb3 223 SUPERFAMILY SSF46894 125 220 2.1E-20 T 21-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VFU_RS09885 cc66c07380f9c8df6195064048077cb3 223 PANTHER PTHR26402:SF578 1 220 1.1E-67 T 21-04-2016 VFU_RS09885 cc66c07380f9c8df6195064048077cb3 223 Gene3D G3DSA:1.10.10.10 125 220 7.7E-22 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS09040 72c4458306a9c7a8196b73b7f5e4230d 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 142 160 2.7E-15 T 21-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VFU_RS09040 72c4458306a9c7a8196b73b7f5e4230d 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 161 178 2.7E-15 T 21-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VFU_RS09040 72c4458306a9c7a8196b73b7f5e4230d 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 121 142 2.7E-15 T 21-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VFU_RS09040 72c4458306a9c7a8196b73b7f5e4230d 206 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 127 204 1.7E-19 T 21-04-2016 IPR006260 TonB, C-terminal GO:0006810 VFU_RS09040 72c4458306a9c7a8196b73b7f5e4230d 206 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 126 204 3.7E-21 T 21-04-2016 IPR006260 TonB, C-terminal GO:0006810 VFU_RS09040 72c4458306a9c7a8196b73b7f5e4230d 206 SUPERFAMILY SSF74653 118 196 6.41E-25 T 21-04-2016 VFU_RS09040 72c4458306a9c7a8196b73b7f5e4230d 206 PANTHER PTHR33446:SF1 48 204 2.6E-28 T 21-04-2016 VFU_RS09040 72c4458306a9c7a8196b73b7f5e4230d 206 PANTHER PTHR33446 48 204 2.6E-28 T 21-04-2016 VFU_RS09040 72c4458306a9c7a8196b73b7f5e4230d 206 Gene3D G3DSA:3.30.1150.10 126 204 1.1E-10 T 21-04-2016 VFU_RS05775 a4c132b639652d0d4d5c423cf2c14ca8 623 PANTHER PTHR32089 3 623 1.1E-257 T 21-04-2016 VFU_RS05775 a4c132b639652d0d4d5c423cf2c14ca8 623 Pfam PF00672 HAMP domain 273 343 6.6E-13 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS05775 a4c132b639652d0d4d5c423cf2c14ca8 623 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 433 621 2.2E-47 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VFU_RS05775 a4c132b639652d0d4d5c423cf2c14ca8 623 SUPERFAMILY SSF103190 55 184 6.8E-17 T 21-04-2016 IPR029151 Periplasmic sensor domain-like VFU_RS05775 a4c132b639652d0d4d5c423cf2c14ca8 623 SMART SM00283 361 622 8.7E-72 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VFU_RS05775 a4c132b639652d0d4d5c423cf2c14ca8 623 SMART SM00304 374 441 70.0 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS05775 a4c132b639652d0d4d5c423cf2c14ca8 623 SMART SM00304 292 346 6.0E-9 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS05775 a4c132b639652d0d4d5c423cf2c14ca8 623 Gene3D G3DSA:3.30.450.20 139 270 3.1E-32 T 21-04-2016 VFU_RS05775 a4c132b639652d0d4d5c423cf2c14ca8 623 SUPERFAMILY SSF58104 314 621 2.35E-73 T 21-04-2016 VFU_RS05775 a4c132b639652d0d4d5c423cf2c14ca8 623 Gene3D G3DSA:1.10.287.950 376 593 4.3E-56 T 21-04-2016 VFU_RS05775 a4c132b639652d0d4d5c423cf2c14ca8 623 Pfam PF02743 Cache domain 35 254 6.3E-31 T 21-04-2016 IPR033479 Double Cache domain 1 VFU_RS05775 a4c132b639652d0d4d5c423cf2c14ca8 623 PANTHER PTHR32089:SF64 3 623 1.1E-257 T 21-04-2016 VFU_RS02590 416cc838671b482747a393aa1572e479 147 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 31 3.9E-9 T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site VFU_RS02590 416cc838671b482747a393aa1572e479 147 PANTHER PTHR30093 7 146 1.1E-71 T 21-04-2016 VFU_RS02590 416cc838671b482747a393aa1572e479 147 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site VFU_RS02590 416cc838671b482747a393aa1572e479 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 10 35 4.2E-22 T 21-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 VFU_RS02590 416cc838671b482747a393aa1572e479 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 46 64 4.2E-22 T 21-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 VFU_RS02590 416cc838671b482747a393aa1572e479 147 Pfam PF08334 Type II secretion system (T2SS), protein G 33 141 1.5E-42 T 21-04-2016 IPR013545 Type II secretion system protein G VFU_RS02590 416cc838671b482747a393aa1572e479 147 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 6 28 1.3E-8 T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site VFU_RS02590 416cc838671b482747a393aa1572e479 147 SUPERFAMILY SSF54523 36 142 1.1E-37 T 21-04-2016 VFU_RS02590 416cc838671b482747a393aa1572e479 147 PANTHER PTHR30093:SF9 7 146 1.1E-71 T 21-04-2016 VFU_RS02590 416cc838671b482747a393aa1572e479 147 Gene3D G3DSA:3.30.700.10 11 77 5.0E-9 T 21-04-2016 VFU_RS02590 416cc838671b482747a393aa1572e479 147 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 9 142 1.3E-57 T 21-04-2016 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 VFU_RS02670 116305df2c9d320347f7166cf194dfcb 161 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 21-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VFU_RS02670 116305df2c9d320347f7166cf194dfcb 161 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 3.2E-23 T 21-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 VFU_RS02670 116305df2c9d320347f7166cf194dfcb 161 Gene3D G3DSA:1.10.287.180 1 75 1.9E-22 T 21-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 VFU_RS02670 116305df2c9d320347f7166cf194dfcb 161 PANTHER PTHR30437 1 159 1.3E-84 T 21-04-2016 VFU_RS02670 116305df2c9d320347f7166cf194dfcb 161 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 157 2.1E-21 T 21-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VFU_RS02670 116305df2c9d320347f7166cf194dfcb 161 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 26.19 T 21-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 VFU_RS02670 116305df2c9d320347f7166cf194dfcb 161 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 21-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VFU_RS02670 116305df2c9d320347f7166cf194dfcb 161 SUPERFAMILY SSF54534 80 157 5.49E-19 T 21-04-2016 VFU_RS02670 116305df2c9d320347f7166cf194dfcb 161 PANTHER PTHR30437:SF6 1 159 1.3E-84 T 21-04-2016 VFU_RS02670 116305df2c9d320347f7166cf194dfcb 161 Gene3D G3DSA:3.10.50.30 76 157 2.6E-26 T 21-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VFU_RS02670 116305df2c9d320347f7166cf194dfcb 161 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 2 159 2.8E-73 T 21-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 VFU_RS02670 116305df2c9d320347f7166cf194dfcb 161 PIRSF PIRSF006092 1 159 6.8E-43 T 21-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 VFU_RS02670 116305df2c9d320347f7166cf194dfcb 161 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 158 50.408 T 21-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 VFU_RS02670 116305df2c9d320347f7166cf194dfcb 161 SUPERFAMILY SSF46557 3 78 1.83E-25 T 21-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 VFU_RS01970 92a8943ede14779fbf1d929783d6b216 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 1.2E-11 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VFU_RS01970 92a8943ede14779fbf1d929783d6b216 200 Pfam PF13977 Bacterial transcriptional repressor 85 192 1.3E-30 T 21-04-2016 VFU_RS01970 92a8943ede14779fbf1d929783d6b216 200 PANTHER PTHR30055:SF61 1 194 2.6E-67 T 21-04-2016 VFU_RS01970 92a8943ede14779fbf1d929783d6b216 200 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 2 192 3.4E-73 T 21-04-2016 IPR017757 Transcriptional repressor BetI UniPathway: UPA00529 VFU_RS01970 92a8943ede14779fbf1d929783d6b216 200 PANTHER PTHR30055 1 194 2.6E-67 T 21-04-2016 VFU_RS01970 92a8943ede14779fbf1d929783d6b216 200 Gene3D G3DSA:1.10.357.10 1 194 1.4E-46 T 21-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 VFU_RS01970 92a8943ede14779fbf1d929783d6b216 200 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 21-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VFU_RS01970 92a8943ede14779fbf1d929783d6b216 200 SUPERFAMILY SSF48498 86 192 4.56E-16 T 21-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal VFU_RS01970 92a8943ede14779fbf1d929783d6b216 200 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 198 93.126 T 21-04-2016 IPR017757 Transcriptional repressor BetI UniPathway: UPA00529 VFU_RS01970 92a8943ede14779fbf1d929783d6b216 200 SUPERFAMILY SSF46689 5 79 4.26E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS03255 8e46f583bd7a9f40faa8ccc354a13d95 438 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 21-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 VFU_RS03255 8e46f583bd7a9f40faa8ccc354a13d95 438 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 438 216.87 T 21-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 VFU_RS03255 8e46f583bd7a9f40faa8ccc354a13d95 438 SUPERFAMILY SSF52540 3 436 6.69E-178 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS03255 8e46f583bd7a9f40faa8ccc354a13d95 438 PANTHER PTHR11846 1 435 1.2E-252 T 21-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 VFU_RS03255 8e46f583bd7a9f40faa8ccc354a13d95 438 Gene3D G3DSA:3.90.170.10 267 431 1.8E-63 T 21-04-2016 VFU_RS03255 8e46f583bd7a9f40faa8ccc354a13d95 438 Gene3D G3DSA:3.40.440.10 196 266 1.2E-70 T 21-04-2016 VFU_RS03255 8e46f583bd7a9f40faa8ccc354a13d95 438 Gene3D G3DSA:3.40.440.10 4 94 1.2E-70 T 21-04-2016 VFU_RS03255 8e46f583bd7a9f40faa8ccc354a13d95 438 Gene3D G3DSA:1.10.300.10 103 195 7.2E-38 T 21-04-2016 VFU_RS03255 8e46f583bd7a9f40faa8ccc354a13d95 438 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 21-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 VFU_RS03255 8e46f583bd7a9f40faa8ccc354a13d95 438 SMART SM00788 4 431 5.2E-303 T 21-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 VFU_RS03255 8e46f583bd7a9f40faa8ccc354a13d95 438 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 431 3.8E-191 T 21-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 VFU_RS03255 8e46f583bd7a9f40faa8ccc354a13d95 438 Pfam PF00709 Adenylosuccinate synthetase 5 430 3.2E-175 T 21-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 VFU_RS00245 b7cf0f074cb5e1c08ee846dbdd637e7b 182 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 181 1.1E-70 T 21-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 VFU_RS00245 b7cf0f074cb5e1c08ee846dbdd637e7b 182 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 25.782 T 21-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 VFU_RS00245 b7cf0f074cb5e1c08ee846dbdd637e7b 182 SMART SM00738 6 115 2.2E-49 T 21-04-2016 IPR006645 NusG, N-terminal GO:0006355 VFU_RS00245 b7cf0f074cb5e1c08ee846dbdd637e7b 182 Gene3D G3DSA:3.30.70.940 6 117 1.6E-43 T 21-04-2016 IPR006645 NusG, N-terminal GO:0006355 VFU_RS00245 b7cf0f074cb5e1c08ee846dbdd637e7b 182 SUPERFAMILY SSF50104 125 181 1.2E-19 T 21-04-2016 IPR008991 Translation protein SH3-like domain VFU_RS00245 b7cf0f074cb5e1c08ee846dbdd637e7b 182 Pfam PF02357 Transcription termination factor nusG 7 112 1.9E-26 T 21-04-2016 IPR006645 NusG, N-terminal GO:0006355 VFU_RS00245 b7cf0f074cb5e1c08ee846dbdd637e7b 182 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 6.8E-22 T 21-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 VFU_RS00245 b7cf0f074cb5e1c08ee846dbdd637e7b 182 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 6.8E-22 T 21-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 VFU_RS00245 b7cf0f074cb5e1c08ee846dbdd637e7b 182 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 6.8E-22 T 21-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 VFU_RS00245 b7cf0f074cb5e1c08ee846dbdd637e7b 182 SMART SM00739 127 154 4.8E-5 T 21-04-2016 IPR005824 KOW VFU_RS00245 b7cf0f074cb5e1c08ee846dbdd637e7b 182 SUPERFAMILY SSF82679 6 116 1.1E-39 T 21-04-2016 IPR006645 NusG, N-terminal GO:0006355 VFU_RS00245 b7cf0f074cb5e1c08ee846dbdd637e7b 182 Gene3D G3DSA:2.30.30.30 120 181 1.3E-31 T 21-04-2016 IPR014722 Ribosomal protein L2 domain 2 VFU_RS00245 b7cf0f074cb5e1c08ee846dbdd637e7b 182 PANTHER PTHR30265 3 182 2.3E-85 T 21-04-2016 VFU_RS00245 b7cf0f074cb5e1c08ee846dbdd637e7b 182 Pfam PF00467 KOW motif 131 162 3.7E-7 T 21-04-2016 IPR005824 KOW VFU_RS00245 b7cf0f074cb5e1c08ee846dbdd637e7b 182 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 21-04-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site VFU_RS12560 fc8bc8d5f0b935733addfbb3e1dfaa50 230 PIRSF PIRSF006102 1 219 2.4E-77 T 21-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 VFU_RS12560 fc8bc8d5f0b935733addfbb3e1dfaa50 230 PANTHER PTHR30586 1 220 2.1E-141 T 21-04-2016 VFU_RS12560 fc8bc8d5f0b935733addfbb3e1dfaa50 230 Hamap MF_00478 Electron transport complex subunit RsxE [rsxE]. 1 210 27.989 T 21-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 VFU_RS12560 fc8bc8d5f0b935733addfbb3e1dfaa50 230 PANTHER PTHR30586:SF0 1 220 2.1E-141 T 21-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 VFU_RS12560 fc8bc8d5f0b935733addfbb3e1dfaa50 230 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 6 209 2.8E-89 T 21-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 VFU_RS12560 fc8bc8d5f0b935733addfbb3e1dfaa50 230 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 200 4.0E-65 T 21-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 VFU_RS10380 fa38eaa0594cdbf1edf96d3acef8ce2f 296 PANTHER PTHR36838 1 291 1.4E-115 T 21-04-2016 VFU_RS10380 fa38eaa0594cdbf1edf96d3acef8ce2f 296 PANTHER PTHR36838:SF2 1 291 1.4E-115 T 21-04-2016 VFU_RS10380 fa38eaa0594cdbf1edf96d3acef8ce2f 296 Pfam PF03547 Membrane transport protein 146 284 4.3E-10 T 21-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 VFU_RS10380 fa38eaa0594cdbf1edf96d3acef8ce2f 296 Pfam PF03547 Membrane transport protein 6 141 1.0E-6 T 21-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 VFU_RS04290 fc8d4918fb013285d64c3bf577cafc50 183 Gene3D G3DSA:3.40.80.10 4 179 6.6E-66 T 21-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 VFU_RS04290 fc8d4918fb013285d64c3bf577cafc50 183 SMART SM00644 16 167 2.0E-54 T 21-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 VFU_RS04290 fc8d4918fb013285d64c3bf577cafc50 183 PANTHER PTHR30417:SF4 1 179 2.4E-81 T 21-04-2016 VFU_RS04290 fc8d4918fb013285d64c3bf577cafc50 183 PANTHER PTHR30417 1 179 2.4E-81 T 21-04-2016 VFU_RS04290 fc8d4918fb013285d64c3bf577cafc50 183 SUPERFAMILY SSF55846 2 180 9.03E-66 T 21-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 VFU_RS04290 fc8d4918fb013285d64c3bf577cafc50 183 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 27 167 7.0E-21 T 21-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 VFU_RS02355 321d988a189922121a80ab65a27d9b70 403 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 127 400 64.186 T 21-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 VFU_RS02355 321d988a189922121a80ab65a27d9b70 403 Pfam PF02881 SRP54-type protein, helical bundle domain 119 180 4.9E-13 T 21-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 VFU_RS02355 321d988a189922121a80ab65a27d9b70 403 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 127 399 3.8E-114 T 21-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 VFU_RS02355 321d988a189922121a80ab65a27d9b70 403 SUPERFAMILY SSF52540 196 400 1.01E-53 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS02355 321d988a189922121a80ab65a27d9b70 403 SMART SM00962 199 400 1.8E-122 T 21-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 VFU_RS02355 321d988a189922121a80ab65a27d9b70 403 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 373 386 - T 21-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 VFU_RS02355 321d988a189922121a80ab65a27d9b70 403 PANTHER PTHR11564:SF16 94 403 4.2E-148 T 21-04-2016 VFU_RS02355 321d988a189922121a80ab65a27d9b70 403 Gene3D G3DSA:3.40.50.300 196 400 3.0E-81 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS02355 321d988a189922121a80ab65a27d9b70 403 SMART SM00382 198 378 3.5E-10 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS02355 321d988a189922121a80ab65a27d9b70 403 Gene3D G3DSA:1.20.120.140 89 180 7.2E-33 T 21-04-2016 VFU_RS02355 321d988a189922121a80ab65a27d9b70 403 SMART SM00963 104 184 1.6E-25 T 21-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 VFU_RS02355 321d988a189922121a80ab65a27d9b70 403 SUPERFAMILY SSF47364 99 178 1.44E-21 T 21-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 VFU_RS02355 321d988a189922121a80ab65a27d9b70 403 Pfam PF00448 SRP54-type protein, GTPase domain 199 399 3.3E-77 T 21-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 VFU_RS02355 321d988a189922121a80ab65a27d9b70 403 PANTHER PTHR11564 94 403 4.2E-148 T 21-04-2016 VFU_RS13150 3d063c690a99af1be70271a326d38d72 571 Pfam PF03129 Anticodon binding domain 475 568 1.3E-23 T 21-04-2016 IPR004154 Anticodon-binding VFU_RS13150 3d063c690a99af1be70271a326d38d72 571 PANTHER PTHR11451:SF3 4 244 2.6E-151 T 21-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VFU_RS13150 3d063c690a99af1be70271a326d38d72 571 PANTHER PTHR11451:SF3 399 570 2.6E-151 T 21-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VFU_RS13150 3d063c690a99af1be70271a326d38d72 571 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 40.902 T 21-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VFU_RS13150 3d063c690a99af1be70271a326d38d72 571 Gene3D G3DSA:3.40.50.800 472 570 2.5E-36 T 21-04-2016 IPR004154 Anticodon-binding VFU_RS13150 3d063c690a99af1be70271a326d38d72 571 PIRSF PIRSF001535 1 571 5.5E-265 T 21-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VFU_RS13150 3d063c690a99af1be70271a326d38d72 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 2.4E-16 T 21-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VFU_RS13150 3d063c690a99af1be70271a326d38d72 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.4E-16 T 21-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VFU_RS13150 3d063c690a99af1be70271a326d38d72 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.4E-16 T 21-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VFU_RS13150 3d063c690a99af1be70271a326d38d72 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 2.4E-16 T 21-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VFU_RS13150 3d063c690a99af1be70271a326d38d72 571 PANTHER PTHR11451 4 244 2.6E-151 T 21-04-2016 VFU_RS13150 3d063c690a99af1be70271a326d38d72 571 PANTHER PTHR11451 399 570 2.6E-151 T 21-04-2016 VFU_RS13150 3d063c690a99af1be70271a326d38d72 571 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 568 4.7E-248 T 21-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VFU_RS13150 3d063c690a99af1be70271a326d38d72 571 Gene3D G3DSA:3.90.960.10 248 388 7.1E-31 T 21-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VFU_RS13150 3d063c690a99af1be70271a326d38d72 571 Pfam PF04073 Aminoacyl-tRNA editing domain 257 378 1.0E-24 T 21-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VFU_RS13150 3d063c690a99af1be70271a326d38d72 571 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 7.2E-41 T 21-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VFU_RS13150 3d063c690a99af1be70271a326d38d72 571 SUPERFAMILY SSF55681 407 478 5.33E-98 T 21-04-2016 VFU_RS13150 3d063c690a99af1be70271a326d38d72 571 SUPERFAMILY SSF55681 10 237 5.33E-98 T 21-04-2016 VFU_RS13150 3d063c690a99af1be70271a326d38d72 571 SUPERFAMILY SSF52954 463 570 4.08E-34 T 21-04-2016 IPR004154 Anticodon-binding VFU_RS13150 3d063c690a99af1be70271a326d38d72 571 SUPERFAMILY SSF55826 218 390 2.88E-30 T 21-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VFU_RS13150 3d063c690a99af1be70271a326d38d72 571 Gene3D G3DSA:3.30.930.10 10 234 1.7E-100 T 21-04-2016 VFU_RS13150 3d063c690a99af1be70271a326d38d72 571 Gene3D G3DSA:3.30.930.10 389 471 1.7E-100 T 21-04-2016 VFU_RS11300 431b72c16e0465843c3966d9465bc723 399 PANTHER PTHR11113:SF7 14 387 3.0E-123 T 21-04-2016 VFU_RS11300 431b72c16e0465843c3966d9465bc723 399 Pfam PF01979 Amidohydrolase family 57 385 5.2E-23 T 21-04-2016 IPR006680 Amidohydrolase-related GO:0016787 VFU_RS11300 431b72c16e0465843c3966d9465bc723 399 SUPERFAMILY SSF51338 356 387 1.65E-9 T 21-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VFU_RS11300 431b72c16e0465843c3966d9465bc723 399 SUPERFAMILY SSF51338 10 59 1.65E-9 T 21-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VFU_RS11300 431b72c16e0465843c3966d9465bc723 399 PIRSF PIRSF038994 6 389 5.4E-121 T 21-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 VFU_RS11300 431b72c16e0465843c3966d9465bc723 399 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 10 382 1.3E-91 T 21-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 VFU_RS11300 431b72c16e0465843c3966d9465bc723 399 Gene3D G3DSA:3.20.20.140 61 355 1.4E-104 T 21-04-2016 VFU_RS11300 431b72c16e0465843c3966d9465bc723 399 PANTHER PTHR11113 14 387 3.0E-123 T 21-04-2016 VFU_RS11300 431b72c16e0465843c3966d9465bc723 399 SUPERFAMILY SSF51556 60 356 1.49E-97 T 21-04-2016 IPR032466 Metal-dependent hydrolase VFU_RS11300 431b72c16e0465843c3966d9465bc723 399 Gene3D G3DSA:2.30.40.10 356 387 3.8E-6 T 21-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VFU_RS11300 431b72c16e0465843c3966d9465bc723 399 Gene3D G3DSA:2.30.40.10 9 60 3.8E-6 T 21-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VFU_RS12460 9991a9f9c119f79d2f7dbdd5d175976b 253 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 65 80 - T 21-04-2016 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VFU_RS12460 9991a9f9c119f79d2f7dbdd5d175976b 253 PANTHER PTHR21234:SF22 1 253 3.6E-181 T 21-04-2016 VFU_RS12460 9991a9f9c119f79d2f7dbdd5d175976b 253 Pfam PF01048 Phosphorylase superfamily 20 250 3.7E-39 T 21-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VFU_RS12460 9991a9f9c119f79d2f7dbdd5d175976b 253 SUPERFAMILY SSF53167 6 249 9.03E-72 T 21-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VFU_RS12460 9991a9f9c119f79d2f7dbdd5d175976b 253 Gene3D G3DSA:3.40.50.1580 4 251 7.3E-84 T 21-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VFU_RS12460 9991a9f9c119f79d2f7dbdd5d175976b 253 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 5 251 3.6E-111 T 21-04-2016 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|UniPathway: UPA00574 VFU_RS12460 9991a9f9c119f79d2f7dbdd5d175976b 253 PANTHER PTHR21234 1 253 3.6E-181 T 21-04-2016 IPR018017 Nucleoside phosphorylase VFU_RS15080 6de48f23726c6e87131a080f010b5355 139 Gene3D G3DSA:3.30.70.970 9 127 4.0E-50 T 21-04-2016 IPR009671 Regulator of ribonuclease activity B domain VFU_RS15080 6de48f23726c6e87131a080f010b5355 139 PIRSF PIRSF018193 8 139 2.1E-58 T 21-04-2016 IPR016716 Regulator of ribonuclease activity B VFU_RS15080 6de48f23726c6e87131a080f010b5355 139 SUPERFAMILY SSF89946 8 126 4.97E-40 T 21-04-2016 IPR009671 Regulator of ribonuclease activity B domain VFU_RS15080 6de48f23726c6e87131a080f010b5355 139 Pfam PF06877 Regulator of ribonuclease activity B 19 120 8.1E-35 T 21-04-2016 IPR009671 Regulator of ribonuclease activity B domain VFU_RS15080 6de48f23726c6e87131a080f010b5355 139 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 11 124 30.022 T 21-04-2016 IPR016716 Regulator of ribonuclease activity B VFU_RS03150 05bcbcae53d48dc970a0263c86a1dbbf 223 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 21-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 VFU_RS03150 05bcbcae53d48dc970a0263c86a1dbbf 223 PANTHER PTHR11749:SF7 2 223 3.1E-139 T 21-04-2016 VFU_RS03150 05bcbcae53d48dc970a0263c86a1dbbf 223 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 21-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 VFU_RS03150 05bcbcae53d48dc970a0263c86a1dbbf 223 Gene3D G3DSA:3.20.20.70 2 220 1.2E-97 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS03150 05bcbcae53d48dc970a0263c86a1dbbf 223 SUPERFAMILY SSF51366 4 218 3.3E-78 T 21-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 VFU_RS03150 05bcbcae53d48dc970a0263c86a1dbbf 223 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 4.3E-100 T 21-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 VFU_RS03150 05bcbcae53d48dc970a0263c86a1dbbf 223 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 2.1E-91 T 21-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 VFU_RS03150 05bcbcae53d48dc970a0263c86a1dbbf 223 PIRSF PIRSF001461 1 223 2.1E-106 T 21-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 VFU_RS03150 05bcbcae53d48dc970a0263c86a1dbbf 223 PANTHER PTHR11749 2 223 3.1E-139 T 21-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 VFU_RS05380 f37cfc6ca40814d37ace76525ee391b2 246 SUPERFAMILY SSF53098 11 190 2.07E-54 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VFU_RS05380 f37cfc6ca40814d37ace76525ee391b2 246 Pfam PF00929 Exonuclease 13 180 4.4E-41 T 21-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VFU_RS05380 f37cfc6ca40814d37ace76525ee391b2 246 PANTHER PTHR30231:SF0 11 245 8.8E-126 T 21-04-2016 VFU_RS05380 f37cfc6ca40814d37ace76525ee391b2 246 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 11 229 1.1E-83 T 21-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS05380 f37cfc6ca40814d37ace76525ee391b2 246 Gene3D G3DSA:3.30.420.10 9 191 2.1E-65 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VFU_RS05380 f37cfc6ca40814d37ace76525ee391b2 246 PANTHER PTHR30231 11 245 8.8E-126 T 21-04-2016 VFU_RS05380 f37cfc6ca40814d37ace76525ee391b2 246 SMART SM00479 11 189 1.8E-54 T 21-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VFU_RS05380 f37cfc6ca40814d37ace76525ee391b2 246 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 11 246 3.6E-100 T 21-04-2016 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS11070 08b49657c192254eda6ae589f4d6fd8f 372 Gene3D G3DSA:3.40.1690.10 216 354 1.3E-54 T 21-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal VFU_RS11070 08b49657c192254eda6ae589f4d6fd8f 372 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 205 223 6.4E-31 T 21-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VFU_RS11070 08b49657c192254eda6ae589f4d6fd8f 372 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 225 242 6.4E-31 T 21-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VFU_RS11070 08b49657c192254eda6ae589f4d6fd8f 372 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 299 320 6.4E-31 T 21-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VFU_RS11070 08b49657c192254eda6ae589f4d6fd8f 372 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 269 284 6.4E-31 T 21-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VFU_RS11070 08b49657c192254eda6ae589f4d6fd8f 372 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 7 29 6.4E-31 T 21-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VFU_RS11070 08b49657c192254eda6ae589f4d6fd8f 372 Pfam PF01312 FlhB HrpN YscU SpaS Family 5 344 5.9E-112 T 21-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VFU_RS11070 08b49657c192254eda6ae589f4d6fd8f 372 PANTHER PTHR30531 2 358 6.8E-109 T 21-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VFU_RS11070 08b49657c192254eda6ae589f4d6fd8f 372 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 5 350 2.9E-109 T 21-04-2016 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 VFU_RS11070 08b49657c192254eda6ae589f4d6fd8f 372 PANTHER PTHR30531:SF4 2 358 6.8E-109 T 21-04-2016 VFU_RS11070 08b49657c192254eda6ae589f4d6fd8f 372 SUPERFAMILY SSF160544 249 352 1.44E-33 T 21-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal VFU_RS05870 42e32181a7e575f94116f33c004ff4d9 301 PANTHER PTHR30521 4 297 3.4E-118 T 21-04-2016 VFU_RS05870 42e32181a7e575f94116f33c004ff4d9 301 PANTHER PTHR30521:SF0 4 297 3.4E-118 T 21-04-2016 VFU_RS05870 42e32181a7e575f94116f33c004ff4d9 301 SUPERFAMILY SSF54909 1 296 1.79E-94 T 21-04-2016 IPR011008 Dimeric alpha-beta barrel VFU_RS05870 42e32181a7e575f94116f33c004ff4d9 301 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 293 8.2E-88 T 21-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- VFU_RS05870 42e32181a7e575f94116f33c004ff4d9 301 Pfam PF04261 Dyp-type peroxidase family 5 293 3.6E-92 T 21-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- VFU_RS04650 1f74fd009d029ffaa7aa9b2192dea231 136 Gene3D G3DSA:1.10.10.10 8 135 3.9E-25 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS04650 1f74fd009d029ffaa7aa9b2192dea231 136 SMART SM00347 23 124 3.3E-12 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VFU_RS04650 1f74fd009d029ffaa7aa9b2192dea231 136 PANTHER PTHR33164 10 136 2.1E-15 T 21-04-2016 VFU_RS04650 1f74fd009d029ffaa7aa9b2192dea231 136 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 7.2E-10 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VFU_RS04650 1f74fd009d029ffaa7aa9b2192dea231 136 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 7.2E-10 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VFU_RS04650 1f74fd009d029ffaa7aa9b2192dea231 136 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 7.2E-10 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VFU_RS04650 1f74fd009d029ffaa7aa9b2192dea231 136 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 7.2E-10 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VFU_RS04650 1f74fd009d029ffaa7aa9b2192dea231 136 Pfam PF01047 MarR family 34 88 4.7E-13 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VFU_RS04650 1f74fd009d029ffaa7aa9b2192dea231 136 SUPERFAMILY SSF46785 9 134 6.3E-22 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS01400 d58e02ad709295a966668f0866cc035c 88 SUPERFAMILY SSF160272 1 86 1.02E-28 T 21-04-2016 IPR009962 Protein of unknown function DUF1488 VFU_RS01400 d58e02ad709295a966668f0866cc035c 88 Gene3D G3DSA:3.30.160.140 1 86 3.1E-34 T 21-04-2016 IPR009962 Protein of unknown function DUF1488 VFU_RS01400 d58e02ad709295a966668f0866cc035c 88 Pfam PF07369 Protein of unknown function (DUF1488) 5 84 2.5E-25 T 21-04-2016 IPR009962 Protein of unknown function DUF1488 VFU_RS10680 f4602fac000edd16f0d16a0d5b24cc23 100 PANTHER PTHR37811 1 100 9.1E-34 T 21-04-2016 VFU_RS10680 f4602fac000edd16f0d16a0d5b24cc23 100 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 75 6.8E-14 T 21-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain VFU_RS10680 f4602fac000edd16f0d16a0d5b24cc23 100 SUPERFAMILY SSF54909 1 98 1.61E-24 T 21-04-2016 IPR011008 Dimeric alpha-beta barrel VFU_RS10680 f4602fac000edd16f0d16a0d5b24cc23 100 PANTHER PTHR37811:SF2 1 100 9.1E-34 T 21-04-2016 VFU_RS10680 f4602fac000edd16f0d16a0d5b24cc23 100 Gene3D G3DSA:3.30.70.900 1 97 2.1E-17 T 21-04-2016 VFU_RS14980 04afec182cce5a0e1ae0fc8d247700ad 431 SUPERFAMILY SSF109998 28 200 5.1E-35 T 21-04-2016 IPR027304 Trigger factor/SurA domain VFU_RS14980 04afec182cce5a0e1ae0fc8d247700ad 431 Hamap MF_01183 Chaperone SurA [surA]. 7 426 31.805 T 21-04-2016 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 VFU_RS14980 04afec182cce5a0e1ae0fc8d247700ad 431 Pfam PF00639 PPIC-type PPIASE domain 287 378 1.3E-22 T 21-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 VFU_RS14980 04afec182cce5a0e1ae0fc8d247700ad 431 PANTHER PTHR10657 3 424 1.6E-133 T 21-04-2016 VFU_RS14980 04afec182cce5a0e1ae0fc8d247700ad 431 Pfam PF13616 PPIC-type PPIASE domain 165 272 2.6E-21 T 21-04-2016 VFU_RS14980 04afec182cce5a0e1ae0fc8d247700ad 431 PANTHER PTHR10657:SF15 3 424 1.6E-133 T 21-04-2016 VFU_RS14980 04afec182cce5a0e1ae0fc8d247700ad 431 SUPERFAMILY SSF54534 175 273 4.38E-25 T 21-04-2016 VFU_RS14980 04afec182cce5a0e1ae0fc8d247700ad 431 Gene3D G3DSA:3.10.50.40 281 404 4.7E-33 T 21-04-2016 VFU_RS14980 04afec182cce5a0e1ae0fc8d247700ad 431 Gene3D G3DSA:3.10.50.40 173 274 1.3E-27 T 21-04-2016 VFU_RS14980 04afec182cce5a0e1ae0fc8d247700ad 431 Pfam PF09312 SurA N-terminal domain 27 144 5.4E-41 T 21-04-2016 IPR015391 SurA N-terminal VFU_RS14980 04afec182cce5a0e1ae0fc8d247700ad 431 SUPERFAMILY SSF54534 281 383 1.37E-29 T 21-04-2016 VFU_RS03365 07f666fc8525603df8073a47f18b908e 167 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 2.0E-69 T 21-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 VFU_RS03365 07f666fc8525603df8073a47f18b908e 167 Gene3D G3DSA:3.30.230.10 78 159 1.8E-33 T 21-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VFU_RS03365 07f666fc8525603df8073a47f18b908e 167 SUPERFAMILY SSF54211 80 159 5.82E-27 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VFU_RS03365 07f666fc8525603df8073a47f18b908e 167 ProSitePatterns PS00585 Ribosomal protein S5 signature. 29 61 - T 21-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site VFU_RS03365 07f666fc8525603df8073a47f18b908e 167 Pfam PF00333 Ribosomal protein S5, N-terminal domain 12 75 5.9E-29 T 21-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 VFU_RS03365 07f666fc8525603df8073a47f18b908e 167 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 164 34.61 T 21-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 VFU_RS03365 07f666fc8525603df8073a47f18b908e 167 Gene3D G3DSA:3.30.160.20 10 73 1.6E-30 T 21-04-2016 IPR014720 Double-stranded RNA-binding domain VFU_RS03365 07f666fc8525603df8073a47f18b908e 167 Pfam PF03719 Ribosomal protein S5, C-terminal domain 88 158 3.4E-30 T 21-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 VFU_RS03365 07f666fc8525603df8073a47f18b908e 167 PANTHER PTHR13718 10 163 1.7E-78 T 21-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 VFU_RS03365 07f666fc8525603df8073a47f18b908e 167 SUPERFAMILY SSF54768 8 76 5.86E-24 T 21-04-2016 VFU_RS06670 91aa4c629def9ffafa832e47ea76743c 278 Pfam PF12697 Alpha/beta hydrolase family 23 255 3.3E-20 T 21-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VFU_RS06670 91aa4c629def9ffafa832e47ea76743c 278 PANTHER PTHR10992 20 263 6.9E-51 T 21-04-2016 VFU_RS06670 91aa4c629def9ffafa832e47ea76743c 278 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 20 261 4.0E-86 T 21-04-2016 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 VFU_RS06670 91aa4c629def9ffafa832e47ea76743c 278 SUPERFAMILY SSF53474 17 261 2.04E-45 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold VFU_RS06670 91aa4c629def9ffafa832e47ea76743c 278 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 16 262 34.551 T 21-04-2016 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 VFU_RS06670 91aa4c629def9ffafa832e47ea76743c 278 PANTHER PTHR10992:SF698 20 263 6.9E-51 T 21-04-2016 VFU_RS06670 91aa4c629def9ffafa832e47ea76743c 278 Gene3D G3DSA:3.40.50.1820 18 261 1.0E-63 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold VFU_RS09640 7dc2da265ae2dd43923bd7cac418f33a 311 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 119 1.0E-12 T 21-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VFU_RS09640 7dc2da265ae2dd43923bd7cac418f33a 311 SUPERFAMILY SSF51735 1 155 2.47E-29 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS09640 7dc2da265ae2dd43923bd7cac418f33a 311 SMART SM00859 5 123 1.5E-12 T 21-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VFU_RS09640 7dc2da265ae2dd43923bd7cac418f33a 311 Pfam PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation 131 284 2.4E-64 T 21-04-2016 IPR015426 Acetaldehyde dehydrogenase, C-terminal GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 VFU_RS09640 7dc2da265ae2dd43923bd7cac418f33a 311 SUPERFAMILY SSF55347 131 284 5.49E-66 T 21-04-2016 VFU_RS09640 7dc2da265ae2dd43923bd7cac418f33a 311 Gene3D G3DSA:3.40.50.720 1 143 8.1E-75 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS09640 7dc2da265ae2dd43923bd7cac418f33a 311 TIGRFAM TIGR03215 ac_ald_DH_ac: acetaldehyde dehydrogenase (acetylating) 3 309 4.1E-142 T 21-04-2016 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 VFU_RS09640 7dc2da265ae2dd43923bd7cac418f33a 311 Gene3D G3DSA:3.30.360.10 144 284 7.9E-75 T 21-04-2016 VFU_RS09640 7dc2da265ae2dd43923bd7cac418f33a 311 PIRSF PIRSF015689 1 311 3.2E-135 T 21-04-2016 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 VFU_RS09640 7dc2da265ae2dd43923bd7cac418f33a 311 Hamap MF_01657 Acetaldehyde dehydrogenase [mhpF]. 1 311 140.544 T 21-04-2016 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 VFU_RS09640 7dc2da265ae2dd43923bd7cac418f33a 311 PANTHER PTHR41706 1 309 4.8E-136 T 21-04-2016 VFU_RS04125 a2b74fd3f5fe68a529dd08953042782e 125 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 2 124 7.4E-35 T 21-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 VFU_RS04125 a2b74fd3f5fe68a529dd08953042782e 125 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 86 6.0E-31 T 21-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 VFU_RS04125 a2b74fd3f5fe68a529dd08953042782e 125 SUPERFAMILY SSF56214 1 124 1.31E-31 T 21-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 VFU_RS04125 a2b74fd3f5fe68a529dd08953042782e 125 Gene3D G3DSA:3.90.470.20 1 124 4.5E-43 T 21-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 VFU_RS04125 a2b74fd3f5fe68a529dd08953042782e 125 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 124 1.7E-44 T 21-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 VFU_RS04125 a2b74fd3f5fe68a529dd08953042782e 125 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 121 2.0E-24 T 21-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 VFU_RS04125 a2b74fd3f5fe68a529dd08953042782e 125 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 125 27.238 T 21-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 VFU_RS00410 a956fba34b0e733f55789fdec20671c7 447 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 3.3E-243 T 21-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 VFU_RS00410 a956fba34b0e733f55789fdec20671c7 447 SUPERFAMILY SSF52440 1 113 9.35E-46 T 21-04-2016 IPR016185 Pre-ATP-grasp domain VFU_RS00410 a956fba34b0e733f55789fdec20671c7 447 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 4.6E-84 T 21-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VFU_RS00410 a956fba34b0e733f55789fdec20671c7 447 PANTHER PTHR18866 1 442 2.3E-302 T 21-04-2016 VFU_RS00410 a956fba34b0e733f55789fdec20671c7 447 Gene3D G3DSA:3.30.1490.20 130 203 1.7E-29 T 21-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VFU_RS00410 a956fba34b0e733f55789fdec20671c7 447 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 7.2E-38 T 21-04-2016 IPR005482 Biotin carboxylase, C-terminal VFU_RS00410 a956fba34b0e733f55789fdec20671c7 447 SMART SM00878 336 441 6.2E-63 T 21-04-2016 IPR005482 Biotin carboxylase, C-terminal VFU_RS00410 a956fba34b0e733f55789fdec20671c7 447 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 21-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VFU_RS00410 a956fba34b0e733f55789fdec20671c7 447 Gene3D G3DSA:3.30.470.20 204 444 5.6E-100 T 21-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VFU_RS00410 a956fba34b0e733f55789fdec20671c7 447 SUPERFAMILY SSF56059 83 347 3.03E-70 T 21-04-2016 VFU_RS00410 a956fba34b0e733f55789fdec20671c7 447 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 21-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VFU_RS00410 a956fba34b0e733f55789fdec20671c7 447 Gene3D G3DSA:3.40.50.20 1 129 5.8E-49 T 21-04-2016 IPR016185 Pre-ATP-grasp domain VFU_RS00410 a956fba34b0e733f55789fdec20671c7 447 SUPERFAMILY SSF51246 331 444 8.89E-43 T 21-04-2016 IPR011054 Rudiment single hybrid motif VFU_RS00410 a956fba34b0e733f55789fdec20671c7 447 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 4.6E-43 T 21-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain VFU_RS06700 fd0a6343feb2ed28b6493a8f492d3455 623 SMART SM00563 455 569 2.1E-35 T 21-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VFU_RS06700 fd0a6343feb2ed28b6493a8f492d3455 623 Pfam PF07690 Major Facilitator Superfamily 18 315 7.9E-11 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VFU_RS06700 fd0a6343feb2ed28b6493a8f492d3455 623 SUPERFAMILY SSF69593 384 571 1.83E-29 T 21-04-2016 VFU_RS06700 fd0a6343feb2ed28b6493a8f492d3455 623 SUPERFAMILY SSF103473 10 423 5.75E-28 T 21-04-2016 IPR020846 Major facilitator superfamily domain VFU_RS06700 fd0a6343feb2ed28b6493a8f492d3455 623 Gene3D G3DSA:1.20.1250.20 18 207 1.1E-7 T 21-04-2016 VFU_RS06700 fd0a6343feb2ed28b6493a8f492d3455 623 Gene3D G3DSA:3.40.1130.10 444 567 3.0E-15 T 21-04-2016 VFU_RS06700 fd0a6343feb2ed28b6493a8f492d3455 623 PANTHER PTHR10434:SF15 344 619 6.1E-149 T 21-04-2016 VFU_RS06700 fd0a6343feb2ed28b6493a8f492d3455 623 Gene3D G3DSA:1.20.1250.20 226 420 1.6E-9 T 21-04-2016 VFU_RS06700 fd0a6343feb2ed28b6493a8f492d3455 623 PANTHER PTHR10434 344 619 6.1E-149 T 21-04-2016 VFU_RS06700 fd0a6343feb2ed28b6493a8f492d3455 623 Pfam PF01553 Acyltransferase 440 567 8.8E-24 T 21-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VFU_RS11655 b919ed04fe3ca104d9f22319e5c252bd 196 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 3 187 1.1E-74 T 21-04-2016 IPR014094 Penicillin-binding protein activator LpoB VFU_RS11655 b919ed04fe3ca104d9f22319e5c252bd 196 PANTHER PTHR40593 1 196 2.8E-96 T 21-04-2016 VFU_RS11655 b919ed04fe3ca104d9f22319e5c252bd 196 Gene3D G3DSA:3.30.1830.10 17 50 8.2E-4 T 21-04-2016 IPR009736 Protein of unknown function DUF1307 VFU_RS11655 b919ed04fe3ca104d9f22319e5c252bd 196 Pfam PF13036 Peptidoglycan-synthase activator LpoB 9 185 1.6E-64 T 21-04-2016 IPR014094 Penicillin-binding protein activator LpoB VFU_RS07480 03e678e98c11bcbc630d2efae4ddec31 779 SUPERFAMILY SSF82866 221 405 1.44E-17 T 21-04-2016 VFU_RS07480 03e678e98c11bcbc630d2efae4ddec31 779 Gene3D G3DSA:1.20.1640.10 630 765 7.2E-14 T 21-04-2016 VFU_RS07480 03e678e98c11bcbc630d2efae4ddec31 779 Gene3D G3DSA:1.20.1640.10 220 405 5.8E-17 T 21-04-2016 VFU_RS07480 03e678e98c11bcbc630d2efae4ddec31 779 SUPERFAMILY SSF82866 597 767 1.7E-22 T 21-04-2016 VFU_RS07480 03e678e98c11bcbc630d2efae4ddec31 779 Pfam PF03176 MMPL family 169 420 3.3E-12 T 21-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 VFU_RS05145 e62bd78a569114b3924dc8c16f878ea5 475 SUPERFAMILY SSF53720 16 473 1.57E-161 T 21-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 VFU_RS05145 e62bd78a569114b3924dc8c16f878ea5 475 Gene3D G3DSA:3.40.605.10 15 262 1.1E-92 T 21-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 VFU_RS05145 e62bd78a569114b3924dc8c16f878ea5 475 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 23 468 2.6E-198 T 21-04-2016 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 UniPathway: UPA00733 VFU_RS05145 e62bd78a569114b3924dc8c16f878ea5 475 PANTHER PTHR11699 15 472 2.1E-253 T 21-04-2016 VFU_RS05145 e62bd78a569114b3924dc8c16f878ea5 475 Gene3D G3DSA:3.40.309.10 263 445 9.5E-71 T 21-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 VFU_RS05145 e62bd78a569114b3924dc8c16f878ea5 475 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 21-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 VFU_RS05145 e62bd78a569114b3924dc8c16f878ea5 475 Pfam PF00171 Aldehyde dehydrogenase family 18 469 3.8E-166 T 21-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 VFU_RS05145 e62bd78a569114b3924dc8c16f878ea5 475 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 21-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 VFU_RS05145 e62bd78a569114b3924dc8c16f878ea5 475 PANTHER PTHR11699:SF49 15 472 2.1E-253 T 21-04-2016 VFU_RS02545 3007bf3428d9f3ff0cac0ca5c4a07235 308 SUPERFAMILY SSF55729 2 154 1.22E-28 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase VFU_RS02545 3007bf3428d9f3ff0cac0ca5c4a07235 308 Gene3D G3DSA:3.40.630.30 5 144 6.4E-26 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase VFU_RS02545 3007bf3428d9f3ff0cac0ca5c4a07235 308 SUPERFAMILY SSF54637 154 296 2.46E-39 T 21-04-2016 IPR029069 HotDog domain VFU_RS02545 3007bf3428d9f3ff0cac0ca5c4a07235 308 PANTHER PTHR13355:SF8 4 160 2.5E-71 T 21-04-2016 VFU_RS02545 3007bf3428d9f3ff0cac0ca5c4a07235 308 Pfam PF00583 Acetyltransferase (GNAT) family 53 123 1.1E-11 T 21-04-2016 IPR000182 GNAT domain GO:0008080 VFU_RS02545 3007bf3428d9f3ff0cac0ca5c4a07235 308 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 157 296 2.9E-49 T 21-04-2016 IPR012660 Thioesterase, putative VFU_RS02545 3007bf3428d9f3ff0cac0ca5c4a07235 308 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 164 296 2.0E-43 T 21-04-2016 IPR012660 Thioesterase, putative VFU_RS02545 3007bf3428d9f3ff0cac0ca5c4a07235 308 Gene3D G3DSA:3.10.129.10 145 297 6.5E-62 T 21-04-2016 IPR029069 HotDog domain VFU_RS02545 3007bf3428d9f3ff0cac0ca5c4a07235 308 PANTHER PTHR13355 4 160 2.5E-71 T 21-04-2016 VFU_RS03030 53774bf3add6160fe5daa1a296b2a11f 144 Gene3D G3DSA:3.40.250.10 22 143 9.0E-28 T 21-04-2016 IPR001763 Rhodanese-like domain VFU_RS03030 53774bf3add6160fe5daa1a296b2a11f 144 PANTHER PTHR12231:SF138 1 144 7.9E-43 T 21-04-2016 VFU_RS03030 53774bf3add6160fe5daa1a296b2a11f 144 SMART SM00450 40 138 2.6E-18 T 21-04-2016 IPR001763 Rhodanese-like domain VFU_RS03030 53774bf3add6160fe5daa1a296b2a11f 144 SUPERFAMILY SSF52821 16 143 1.44E-28 T 21-04-2016 IPR001763 Rhodanese-like domain VFU_RS03030 53774bf3add6160fe5daa1a296b2a11f 144 PANTHER PTHR12231 1 144 7.9E-43 T 21-04-2016 VFU_RS03030 53774bf3add6160fe5daa1a296b2a11f 144 Pfam PF00581 Rhodanese-like domain 41 135 2.0E-17 T 21-04-2016 IPR001763 Rhodanese-like domain VFU_RS10615 e8d268bb96708531270466b921f15744 184 Pfam PF01381 Helix-turn-helix 10 64 2.4E-17 T 21-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VFU_RS10615 e8d268bb96708531270466b921f15744 184 PANTHER PTHR10245:SF42 6 184 1.4E-67 T 21-04-2016 VFU_RS10615 e8d268bb96708531270466b921f15744 184 PANTHER PTHR10245 6 184 1.4E-67 T 21-04-2016 VFU_RS10615 e8d268bb96708531270466b921f15744 184 SMART SM00530 9 64 8.0E-17 T 21-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VFU_RS10615 e8d268bb96708531270466b921f15744 184 Pfam PF07883 Cupin domain 110 177 1.1E-15 T 21-04-2016 IPR013096 Cupin 2, conserved barrel VFU_RS10615 e8d268bb96708531270466b921f15744 184 SUPERFAMILY SSF47413 4 72 2.05E-19 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VFU_RS10615 e8d268bb96708531270466b921f15744 184 SUPERFAMILY SSF51182 49 183 2.02E-25 T 21-04-2016 IPR011051 RmlC-like cupin domain VFU_RS10615 e8d268bb96708531270466b921f15744 184 Gene3D G3DSA:2.60.120.10 76 182 1.2E-21 T 21-04-2016 IPR014710 RmlC-like jelly roll fold VFU_RS10615 e8d268bb96708531270466b921f15744 184 Gene3D G3DSA:1.10.260.40 4 70 1.1E-23 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VFU_RS06345 a8dd36d306222b0f0728797d781a54ae 111 PANTHER PTHR10293 1 111 3.5E-56 T 21-04-2016 IPR004480 Monothiol glutaredoxin-related VFU_RS06345 a8dd36d306222b0f0728797d781a54ae 111 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 1.2E-45 T 21-04-2016 IPR004480 Monothiol glutaredoxin-related VFU_RS06345 a8dd36d306222b0f0728797d781a54ae 111 PIRSF PIRSF005894 1 107 1.5E-51 T 21-04-2016 IPR014434 Monothiol glutaredoxin VFU_RS06345 a8dd36d306222b0f0728797d781a54ae 111 Gene3D G3DSA:3.40.30.10 7 102 1.1E-30 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS06345 a8dd36d306222b0f0728797d781a54ae 111 SUPERFAMILY SSF52833 1 104 2.39E-33 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS06345 a8dd36d306222b0f0728797d781a54ae 111 Pfam PF00462 Glutaredoxin 16 80 4.2E-16 T 21-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VFU_RS15155 7813bbc791156b1de3f9670471400773 159 Gene3D G3DSA:3.30.700.10 7 143 1.1E-7 T 21-04-2016 VFU_RS15155 7813bbc791156b1de3f9670471400773 159 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 7.6E-8 T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site VFU_RS15155 7813bbc791156b1de3f9670471400773 159 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site VFU_RS15155 7813bbc791156b1de3f9670471400773 159 PANTHER PTHR30093:SF7 1 60 4.6E-27 T 21-04-2016 VFU_RS15155 7813bbc791156b1de3f9670471400773 159 Pfam PF13633 Prokaryotic N-terminal methylation site 4 28 8.8E-9 T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site VFU_RS15155 7813bbc791156b1de3f9670471400773 159 PANTHER PTHR30093 1 60 4.6E-27 T 21-04-2016 VFU_RS15155 7813bbc791156b1de3f9670471400773 159 SUPERFAMILY SSF54523 7 61 4.16E-13 T 21-04-2016 VFU_RS03185 7a24ba5cdba314aa6b3aef80aa9bed4f 339 SUPERFAMILY SSF55729 1 337 1.98E-130 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase VFU_RS03185 7a24ba5cdba314aa6b3aef80aa9bed4f 339 Gene3D G3DSA:2.40.40.20 277 339 5.1E-12 T 21-04-2016 VFU_RS03185 7a24ba5cdba314aa6b3aef80aa9bed4f 339 PANTHER PTHR30420:SF1 1 338 1.2E-191 T 21-04-2016 VFU_RS03185 7a24ba5cdba314aa6b3aef80aa9bed4f 339 PANTHER PTHR30420 1 338 1.2E-191 T 21-04-2016 VFU_RS03185 7a24ba5cdba314aa6b3aef80aa9bed4f 339 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 338 4.9E-133 T 21-04-2016 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 VFU_RS03185 7a24ba5cdba314aa6b3aef80aa9bed4f 339 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 338 5.7E-131 T 21-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 VFU_RS03185 7a24ba5cdba314aa6b3aef80aa9bed4f 339 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 337 4.2E-139 T 21-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 VFU_RS06435 a346fc0389e9c8bed23c36fd1a7302fa 371 PIRSF PIRSF000148 1 371 1.6E-65 T 21-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VFU_RS06435 a346fc0389e9c8bed23c36fd1a7302fa 371 Gene3D G3DSA:3.40.50.720 1 141 5.1E-60 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS06435 a346fc0389e9c8bed23c36fd1a7302fa 371 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 261 275 - T 21-04-2016 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VFU_RS06435 a346fc0389e9c8bed23c36fd1a7302fa 371 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 120 8.2E-22 T 21-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VFU_RS06435 a346fc0389e9c8bed23c36fd1a7302fa 371 SMART SM00859 2 121 1.3E-21 T 21-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VFU_RS06435 a346fc0389e9c8bed23c36fd1a7302fa 371 SUPERFAMILY SSF51735 1 146 4.4E-50 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS06435 a346fc0389e9c8bed23c36fd1a7302fa 371 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 1 366 2.8E-189 T 21-04-2016 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VFU_RS06435 a346fc0389e9c8bed23c36fd1a7302fa 371 Gene3D G3DSA:3.30.360.10 142 350 3.2E-75 T 21-04-2016 VFU_RS06435 a346fc0389e9c8bed23c36fd1a7302fa 371 SUPERFAMILY SSF55347 133 354 2.83E-77 T 21-04-2016 VFU_RS06435 a346fc0389e9c8bed23c36fd1a7302fa 371 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 143 353 4.6E-57 T 21-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VFU_RS06435 a346fc0389e9c8bed23c36fd1a7302fa 371 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 367 31.72 T 21-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VFU_RS06435 a346fc0389e9c8bed23c36fd1a7302fa 371 PANTHER PTHR10174:SF116 200 367 5.1E-154 T 21-04-2016 VFU_RS06435 a346fc0389e9c8bed23c36fd1a7302fa 371 PANTHER PTHR10174:SF116 102 178 5.1E-154 T 21-04-2016 VFU_RS06435 a346fc0389e9c8bed23c36fd1a7302fa 371 PANTHER PTHR10174 200 367 5.1E-154 T 21-04-2016 VFU_RS06435 a346fc0389e9c8bed23c36fd1a7302fa 371 PANTHER PTHR10174 102 178 5.1E-154 T 21-04-2016 VFU_RS05025 aba98f80aa6b9339489f907056ad3616 461 SUPERFAMILY SSF103473 10 437 3.4E-35 T 21-04-2016 IPR020846 Major facilitator superfamily domain VFU_RS05025 aba98f80aa6b9339489f907056ad3616 461 Gene3D G3DSA:1.20.1250.20 18 219 5.7E-16 T 21-04-2016 VFU_RS05025 aba98f80aa6b9339489f907056ad3616 461 Gene3D G3DSA:1.20.1250.20 258 439 1.3E-15 T 21-04-2016 VFU_RS05025 aba98f80aa6b9339489f907056ad3616 461 Pfam PF07690 Major Facilitator Superfamily 24 399 2.3E-14 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VFU_RS05025 aba98f80aa6b9339489f907056ad3616 461 PANTHER PTHR12778 19 436 9.9E-90 T 21-04-2016 VFU_RS02520 84890c6dd29eb5c26d6c26ac5e202c79 609 Gene3D G3DSA:2.40.30.10 210 307 2.9E-27 T 21-04-2016 VFU_RS02520 84890c6dd29eb5c26d6c26ac5e202c79 609 Gene3D G3DSA:3.30.70.240 404 482 1.1E-31 T 21-04-2016 IPR000640 Translation elongation factor EFG, V domain VFU_RS02520 84890c6dd29eb5c26d6c26ac5e202c79 609 Pfam PF00679 Elongation factor G C-terminus 399 480 1.8E-21 T 21-04-2016 IPR000640 Translation elongation factor EFG, V domain VFU_RS02520 84890c6dd29eb5c26d6c26ac5e202c79 609 Gene3D G3DSA:3.30.70.870 308 403 2.9E-39 T 21-04-2016 VFU_RS02520 84890c6dd29eb5c26d6c26ac5e202c79 609 Gene3D G3DSA:2.40.50.250 487 581 2.7E-40 T 21-04-2016 VFU_RS02520 84890c6dd29eb5c26d6c26ac5e202c79 609 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 9 603 4.2E-293 T 21-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 VFU_RS02520 84890c6dd29eb5c26d6c26ac5e202c79 609 Pfam PF03144 Elongation factor Tu domain 2 223 293 1.1E-9 T 21-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 VFU_RS02520 84890c6dd29eb5c26d6c26ac5e202c79 609 Gene3D G3DSA:3.40.50.300 7 209 4.0E-67 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS02520 84890c6dd29eb5c26d6c26ac5e202c79 609 SUPERFAMILY SSF54980 306 391 5.4E-16 T 21-04-2016 IPR009022 Elongation factor G, III-V domain VFU_RS02520 84890c6dd29eb5c26d6c26ac5e202c79 609 PANTHER PTHR23115 1 597 6.2E-299 T 21-04-2016 VFU_RS02520 84890c6dd29eb5c26d6c26ac5e202c79 609 Pfam PF00009 Elongation factor Tu GTP binding domain 8 198 3.8E-57 T 21-04-2016 VFU_RS02520 84890c6dd29eb5c26d6c26ac5e202c79 609 PANTHER PTHR23115:SF14 1 597 6.2E-299 T 21-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 VFU_RS02520 84890c6dd29eb5c26d6c26ac5e202c79 609 PRINTS PR00315 GTP-binding elongation factor signature 11 24 3.3E-13 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VFU_RS02520 84890c6dd29eb5c26d6c26ac5e202c79 609 PRINTS PR00315 GTP-binding elongation factor signature 75 85 3.3E-13 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VFU_RS02520 84890c6dd29eb5c26d6c26ac5e202c79 609 PRINTS PR00315 GTP-binding elongation factor signature 55 63 3.3E-13 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VFU_RS02520 84890c6dd29eb5c26d6c26ac5e202c79 609 PRINTS PR00315 GTP-binding elongation factor signature 127 136 3.3E-13 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VFU_RS02520 84890c6dd29eb5c26d6c26ac5e202c79 609 SUPERFAMILY SSF54980 402 516 1.77E-27 T 21-04-2016 IPR009022 Elongation factor G, III-V domain VFU_RS02520 84890c6dd29eb5c26d6c26ac5e202c79 609 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 154 1.5E-23 T 21-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VFU_RS02520 84890c6dd29eb5c26d6c26ac5e202c79 609 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 21-04-2016 IPR031157 Tr-type G domain, conserved site VFU_RS02520 84890c6dd29eb5c26d6c26ac5e202c79 609 SUPERFAMILY SSF52540 5 211 1.94E-59 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS02520 84890c6dd29eb5c26d6c26ac5e202c79 609 SUPERFAMILY SSF50447 155 303 1.19E-33 T 21-04-2016 IPR009000 Translation protein, beta-barrel domain VFU_RS13235 a003bef42458fc23b526a2d6935d8c23 382 SMART SM00271 4 62 1.2E-31 T 21-04-2016 IPR001623 DnaJ domain VFU_RS13235 a003bef42458fc23b526a2d6935d8c23 382 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 21-04-2016 IPR018253 DnaJ domain, conserved site VFU_RS13235 a003bef42458fc23b526a2d6935d8c23 382 PANTHER PTHR24078:SF231 1 353 9.6E-171 T 21-04-2016 VFU_RS13235 a003bef42458fc23b526a2d6935d8c23 382 Gene3D G3DSA:2.10.230.10 144 213 3.0E-24 T 21-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 VFU_RS13235 a003bef42458fc23b526a2d6935d8c23 382 SUPERFAMILY SSF57938 137 213 2.35E-22 T 21-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 VFU_RS13235 a003bef42458fc23b526a2d6935d8c23 382 SUPERFAMILY SSF49493 189 263 7.59E-20 T 21-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 VFU_RS13235 a003bef42458fc23b526a2d6935d8c23 382 Gene3D G3DSA:2.60.260.20 214 257 5.9E-22 T 21-04-2016 VFU_RS13235 a003bef42458fc23b526a2d6935d8c23 382 Gene3D G3DSA:2.60.260.20 110 143 5.9E-22 T 21-04-2016 VFU_RS13235 a003bef42458fc23b526a2d6935d8c23 382 Pfam PF01556 DnaJ C terminal domain 124 336 6.2E-46 T 21-04-2016 IPR002939 Chaperone DnaJ, C-terminal VFU_RS13235 a003bef42458fc23b526a2d6935d8c23 382 Gene3D G3DSA:1.10.287.110 1 105 7.7E-37 T 21-04-2016 IPR001623 DnaJ domain VFU_RS13235 a003bef42458fc23b526a2d6935d8c23 382 PRINTS PR00625 DnaJ domain signature 42 62 1.8E-32 T 21-04-2016 IPR001623 DnaJ domain VFU_RS13235 a003bef42458fc23b526a2d6935d8c23 382 PRINTS PR00625 DnaJ domain signature 7 25 1.8E-32 T 21-04-2016 IPR001623 DnaJ domain VFU_RS13235 a003bef42458fc23b526a2d6935d8c23 382 PRINTS PR00625 DnaJ domain signature 25 40 1.8E-32 T 21-04-2016 IPR001623 DnaJ domain VFU_RS13235 a003bef42458fc23b526a2d6935d8c23 382 PRINTS PR00625 DnaJ domain signature 62 81 1.8E-32 T 21-04-2016 IPR001623 DnaJ domain VFU_RS13235 a003bef42458fc23b526a2d6935d8c23 382 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 376 42.962 T 21-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 VFU_RS13235 a003bef42458fc23b526a2d6935d8c23 382 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 352 3.6E-141 T 21-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 VFU_RS13235 a003bef42458fc23b526a2d6935d8c23 382 PANTHER PTHR24078 1 353 9.6E-171 T 21-04-2016 VFU_RS13235 a003bef42458fc23b526a2d6935d8c23 382 Pfam PF00226 DnaJ domain 5 67 3.9E-27 T 21-04-2016 IPR001623 DnaJ domain VFU_RS13235 a003bef42458fc23b526a2d6935d8c23 382 SUPERFAMILY SSF49493 116 141 7.59E-20 T 21-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 VFU_RS13235 a003bef42458fc23b526a2d6935d8c23 382 SUPERFAMILY SSF46565 1 110 6.8E-36 T 21-04-2016 IPR001623 DnaJ domain VFU_RS13235 a003bef42458fc23b526a2d6935d8c23 382 Gene3D G3DSA:2.60.260.20 259 336 2.8E-23 T 21-04-2016 VFU_RS13235 a003bef42458fc23b526a2d6935d8c23 382 Pfam PF00684 DnaJ central domain 150 210 5.8E-15 T 21-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 VFU_RS13235 a003bef42458fc23b526a2d6935d8c23 382 SUPERFAMILY SSF49493 262 347 8.37E-23 T 21-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 VFU_RS10050 d92fe77df70c2459709d0c8d9359794b 643 PANTHER PTHR22773:SF91 537 617 4.9E-146 T 21-04-2016 VFU_RS10050 d92fe77df70c2459709d0c8d9359794b 643 PANTHER PTHR22773:SF91 29 487 4.9E-146 T 21-04-2016 VFU_RS10050 d92fe77df70c2459709d0c8d9359794b 643 Pfam PF00361 Proton-conducting membrane transporter 127 417 1.3E-44 T 21-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 VFU_RS10050 d92fe77df70c2459709d0c8d9359794b 643 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 213 234 1.6E-7 T 21-04-2016 VFU_RS10050 d92fe77df70c2459709d0c8d9359794b 643 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 305 317 1.6E-7 T 21-04-2016 VFU_RS10050 d92fe77df70c2459709d0c8d9359794b 643 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 74 99 1.6E-7 T 21-04-2016 VFU_RS10050 d92fe77df70c2459709d0c8d9359794b 643 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 235 261 1.6E-7 T 21-04-2016 VFU_RS10050 d92fe77df70c2459709d0c8d9359794b 643 PANTHER PTHR22773 537 617 4.9E-146 T 21-04-2016 VFU_RS10050 d92fe77df70c2459709d0c8d9359794b 643 PANTHER PTHR22773 29 487 4.9E-146 T 21-04-2016 VFU_RS11990 6bc9cbc84e54a0d177a1727244563b4c 615 PANTHER PTHR11804 125 582 6.2E-114 T 21-04-2016 VFU_RS11990 6bc9cbc84e54a0d177a1727244563b4c 615 PANTHER PTHR11804 41 69 6.2E-114 T 21-04-2016 VFU_RS11990 6bc9cbc84e54a0d177a1727244563b4c 615 SUPERFAMILY SSF55486 3 550 2.77E-74 T 21-04-2016 VFU_RS11990 6bc9cbc84e54a0d177a1727244563b4c 615 PANTHER PTHR11804:SF8 125 582 6.2E-114 T 21-04-2016 VFU_RS11990 6bc9cbc84e54a0d177a1727244563b4c 615 PANTHER PTHR11804:SF8 41 69 6.2E-114 T 21-04-2016 VFU_RS11990 6bc9cbc84e54a0d177a1727244563b4c 615 Gene3D G3DSA:1.10.1370.10 128 261 4.3E-23 T 21-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 VFU_RS11990 6bc9cbc84e54a0d177a1727244563b4c 615 Gene3D G3DSA:1.10.1370.10 376 547 4.3E-23 T 21-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 VFU_RS11990 6bc9cbc84e54a0d177a1727244563b4c 615 Gene3D G3DSA:3.40.390.10 281 375 3.1E-12 T 21-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 VFU_RS11990 6bc9cbc84e54a0d177a1727244563b4c 615 Pfam PF01432 Peptidase family M3 284 490 1.5E-13 T 21-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 VFU_RS05810 305860c337c795ed5233db1a7f8d62e6 378 SUPERFAMILY SSF53187 6 180 1.59E-64 T 21-04-2016 VFU_RS05810 305860c337c795ed5233db1a7f8d62e6 378 SUPERFAMILY SSF53187 294 375 1.59E-64 T 21-04-2016 VFU_RS05810 305860c337c795ed5233db1a7f8d62e6 378 Pfam PF07687 Peptidase dimerisation domain 177 284 1.3E-23 T 21-04-2016 IPR011650 Peptidase M20, dimerisation domain VFU_RS05810 305860c337c795ed5233db1a7f8d62e6 378 SUPERFAMILY SSF55031 181 290 4.49E-29 T 21-04-2016 IPR011650 Peptidase M20, dimerisation domain VFU_RS05810 305860c337c795ed5233db1a7f8d62e6 378 PANTHER PTHR11014:SF106 1 376 3.1E-98 T 21-04-2016 VFU_RS05810 305860c337c795ed5233db1a7f8d62e6 378 Pfam PF01546 Peptidase family M20/M25/M40 64 374 1.4E-43 T 21-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 VFU_RS05810 305860c337c795ed5233db1a7f8d62e6 378 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 4 377 52.348 T 21-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 VFU_RS05810 305860c337c795ed5233db1a7f8d62e6 378 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 7 375 3.8E-182 T 21-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 VFU_RS05810 305860c337c795ed5233db1a7f8d62e6 378 Gene3D G3DSA:3.40.630.10 4 189 1.9E-72 T 21-04-2016 VFU_RS05810 305860c337c795ed5233db1a7f8d62e6 378 Gene3D G3DSA:3.40.630.10 318 376 1.9E-72 T 21-04-2016 VFU_RS05810 305860c337c795ed5233db1a7f8d62e6 378 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 99 137 - T 21-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VFU_RS05810 305860c337c795ed5233db1a7f8d62e6 378 PANTHER PTHR11014 1 376 3.1E-98 T 21-04-2016 VFU_RS05810 305860c337c795ed5233db1a7f8d62e6 378 Gene3D G3DSA:3.30.70.360 190 291 6.1E-35 T 21-04-2016 IPR011650 Peptidase M20, dimerisation domain VFU_RS12730 243e01091a25c0ee5fb49574ee3290a0 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 1.6E-14 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS12730 243e01091a25c0ee5fb49574ee3290a0 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 1.6E-14 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS12730 243e01091a25c0ee5fb49574ee3290a0 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.6E-14 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS12730 243e01091a25c0ee5fb49574ee3290a0 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 1.6E-14 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS12730 243e01091a25c0ee5fb49574ee3290a0 275 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 21-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VFU_RS12730 243e01091a25c0ee5fb49574ee3290a0 275 Gene3D G3DSA:3.40.50.720 5 272 3.6E-58 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS12730 243e01091a25c0ee5fb49574ee3290a0 275 SUPERFAMILY SSF51735 4 248 1.31E-54 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS12730 243e01091a25c0ee5fb49574ee3290a0 275 PANTHER PTHR24322 146 178 4.5E-58 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS12730 243e01091a25c0ee5fb49574ee3290a0 275 PANTHER PTHR24322 7 130 4.5E-58 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS12730 243e01091a25c0ee5fb49574ee3290a0 275 PANTHER PTHR24322:SF463 146 178 4.5E-58 T 21-04-2016 VFU_RS12730 243e01091a25c0ee5fb49574ee3290a0 275 PANTHER PTHR24322:SF463 7 130 4.5E-58 T 21-04-2016 VFU_RS12730 243e01091a25c0ee5fb49574ee3290a0 275 Pfam PF00106 short chain dehydrogenase 5 187 4.0E-38 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS00300 095050dc0a2918c697b2a6c1694496ab 446 PANTHER PTHR12586:SF3 9 445 6.5E-245 T 21-04-2016 VFU_RS00300 095050dc0a2918c697b2a6c1694496ab 446 Pfam PF13091 PLD-like domain 34 146 5.3E-7 T 21-04-2016 IPR025202 Phospholipase D-like domain VFU_RS00300 095050dc0a2918c697b2a6c1694496ab 446 Pfam PF13091 PLD-like domain 251 402 3.1E-26 T 21-04-2016 IPR025202 Phospholipase D-like domain VFU_RS00300 095050dc0a2918c697b2a6c1694496ab 446 SUPERFAMILY SSF56024 5 187 5.02E-28 T 21-04-2016 VFU_RS00300 095050dc0a2918c697b2a6c1694496ab 446 SMART SM00155 126 152 0.0015 T 21-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 VFU_RS00300 095050dc0a2918c697b2a6c1694496ab 446 SMART SM00155 347 374 9.5E-4 T 21-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 VFU_RS00300 095050dc0a2918c697b2a6c1694496ab 446 PANTHER PTHR12586 9 445 6.5E-245 T 21-04-2016 IPR016270 Phospholipase D, phosphatidylserine synthase type GO:0008654|GO:0016780 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 VFU_RS00300 095050dc0a2918c697b2a6c1694496ab 446 PIRSF PIRSF000850 1 446 8.4E-225 T 21-04-2016 IPR016270 Phospholipase D, phosphatidylserine synthase type GO:0008654|GO:0016780 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 VFU_RS00300 095050dc0a2918c697b2a6c1694496ab 446 SUPERFAMILY SSF56024 245 408 1.83E-24 T 21-04-2016 VFU_RS00300 095050dc0a2918c697b2a6c1694496ab 446 Gene3D G3DSA:3.30.870.10 18 182 1.1E-16 T 21-04-2016 VFU_RS00300 095050dc0a2918c697b2a6c1694496ab 446 Gene3D G3DSA:3.30.870.10 244 408 9.4E-22 T 21-04-2016 VFU_RS05570 541006cd38338937bad8851ec23d82ce 397 Pfam PF00700 Bacterial flagellin C-terminal helical region 319 397 1.1E-5 T 21-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VFU_RS05570 541006cd38338937bad8851ec23d82ce 397 PANTHER PTHR30244 3 187 4.6E-103 T 21-04-2016 VFU_RS05570 541006cd38338937bad8851ec23d82ce 397 PANTHER PTHR30244 225 397 4.6E-103 T 21-04-2016 VFU_RS05570 541006cd38338937bad8851ec23d82ce 397 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 2.1E-12 T 21-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VFU_RS05570 541006cd38338937bad8851ec23d82ce 397 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 4 397 5.8E-102 T 21-04-2016 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 VFU_RS05570 541006cd38338937bad8851ec23d82ce 397 PANTHER PTHR30244:SF5 3 187 4.6E-103 T 21-04-2016 VFU_RS05570 541006cd38338937bad8851ec23d82ce 397 PANTHER PTHR30244:SF5 225 397 4.6E-103 T 21-04-2016 VFU_RS05570 541006cd38338937bad8851ec23d82ce 397 SUPERFAMILY SSF64518 1 397 3.27E-67 T 21-04-2016 VFU_RS05570 541006cd38338937bad8851ec23d82ce 397 Gene3D G3DSA:1.20.1330.10 56 170 1.3E-13 T 21-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VFU_RS05570 541006cd38338937bad8851ec23d82ce 397 Gene3D G3DSA:1.20.1330.10 302 346 1.3E-13 T 21-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VFU_RS15290 5d7634a153dbcde3425a2d53f1fa10f9 257 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 52 223 7.9E-52 T 21-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 VFU_RS15290 5d7634a153dbcde3425a2d53f1fa10f9 257 PANTHER PTHR23293 21 254 9.0E-97 T 21-04-2016 VFU_RS15290 5d7634a153dbcde3425a2d53f1fa10f9 257 PIRSF PIRSF000857 6 252 2.2E-58 T 21-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 VFU_RS15290 5d7634a153dbcde3425a2d53f1fa10f9 257 Gene3D G3DSA:3.40.50.620 15 220 8.2E-63 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VFU_RS15290 5d7634a153dbcde3425a2d53f1fa10f9 257 PANTHER PTHR23293:SF5 21 254 9.0E-97 T 21-04-2016 VFU_RS15290 5d7634a153dbcde3425a2d53f1fa10f9 257 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 25 246 1.6E-91 T 21-04-2016 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 VFU_RS15290 5d7634a153dbcde3425a2d53f1fa10f9 257 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 13 247 40.036 T 21-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 VFU_RS15290 5d7634a153dbcde3425a2d53f1fa10f9 257 SUPERFAMILY SSF52402 25 212 1.26E-55 T 21-04-2016 VFU_RS15290 5d7634a153dbcde3425a2d53f1fa10f9 257 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 37 247 2.4E-87 T 21-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 VFU_RS12630 2e906f218ba04d498f9848ecd23fa493 556 SUPERFAMILY SSF52374 11 337 3.1E-103 T 21-04-2016 VFU_RS12630 2e906f218ba04d498f9848ecd23fa493 556 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 21-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VFU_RS12630 2e906f218ba04d498f9848ecd23fa493 556 SUPERFAMILY SSF50715 340 548 5.75E-78 T 21-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 VFU_RS12630 2e906f218ba04d498f9848ecd23fa493 556 Gene3D G3DSA:3.90.800.10 101 209 1.2E-47 T 21-04-2016 VFU_RS12630 2e906f218ba04d498f9848ecd23fa493 556 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 1.4E-124 T 21-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 VFU_RS12630 2e906f218ba04d498f9848ecd23fa493 556 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 552 8.0E-295 T 21-04-2016 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18 VFU_RS12630 2e906f218ba04d498f9848ecd23fa493 556 Gene3D G3DSA:3.40.50.620 28 96 1.7E-43 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VFU_RS12630 2e906f218ba04d498f9848ecd23fa493 556 Gene3D G3DSA:3.40.50.620 212 262 1.7E-43 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VFU_RS12630 2e906f218ba04d498f9848ecd23fa493 556 Gene3D G3DSA:2.40.240.10 462 548 8.3E-32 T 21-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 VFU_RS12630 2e906f218ba04d498f9848ecd23fa493 556 Gene3D G3DSA:2.40.240.10 348 461 2.9E-49 T 21-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 VFU_RS12630 2e906f218ba04d498f9848ecd23fa493 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 6.0E-10 T 21-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VFU_RS12630 2e906f218ba04d498f9848ecd23fa493 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 6.0E-10 T 21-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VFU_RS12630 2e906f218ba04d498f9848ecd23fa493 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 6.0E-10 T 21-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VFU_RS12630 2e906f218ba04d498f9848ecd23fa493 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 6.0E-10 T 21-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VFU_RS12630 2e906f218ba04d498f9848ecd23fa493 556 Gene3D G3DSA:1.10.1160.10 263 338 1.9E-38 T 21-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 VFU_RS12630 2e906f218ba04d498f9848ecd23fa493 556 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 550 54.507 T 21-04-2016 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 VFU_RS12630 2e906f218ba04d498f9848ecd23fa493 556 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 529 1.6E-61 T 21-04-2016 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: REACT_71 VFU_RS12630 2e906f218ba04d498f9848ecd23fa493 556 PANTHER PTHR11451:SF29 7 247 1.7E-238 T 21-04-2016 VFU_RS12630 2e906f218ba04d498f9848ecd23fa493 556 PANTHER PTHR11451:SF29 267 555 1.7E-238 T 21-04-2016 VFU_RS12630 2e906f218ba04d498f9848ecd23fa493 556 PANTHER PTHR11451 7 247 1.7E-238 T 21-04-2016 VFU_RS12630 2e906f218ba04d498f9848ecd23fa493 556 PANTHER PTHR11451 267 555 1.7E-238 T 21-04-2016 VFU_RS04150 e877ecbd3251536cd65406254dc19f31 545 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 1.9E-260 T 21-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 VFU_RS04150 e877ecbd3251536cd65406254dc19f31 545 Pfam PF06418 CTP synthase N-terminus 5 265 2.9E-125 T 21-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 VFU_RS04150 e877ecbd3251536cd65406254dc19f31 545 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.349 T 21-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 VFU_RS04150 e877ecbd3251536cd65406254dc19f31 545 Gene3D G3DSA:3.40.50.880 288 538 1.2E-99 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like VFU_RS04150 e877ecbd3251536cd65406254dc19f31 545 Pfam PF00117 Glutamine amidotransferase class-I 301 535 3.7E-63 T 21-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 VFU_RS04150 e877ecbd3251536cd65406254dc19f31 545 SUPERFAMILY SSF52540 3 269 8.99E-122 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS04150 e877ecbd3251536cd65406254dc19f31 545 SUPERFAMILY SSF52317 289 539 4.44E-88 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like VFU_RS04150 e877ecbd3251536cd65406254dc19f31 545 PANTHER PTHR11550 1 536 0.0 T 21-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 VFU_RS04150 e877ecbd3251536cd65406254dc19f31 545 Gene3D G3DSA:3.40.50.300 1 280 2.3E-133 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS14050 9fc6e38efdf8ada025c6494168e1b0ca 819 SUPERFAMILY SSF55021 383 476 1.14E-19 T 21-04-2016 VFU_RS14050 9fc6e38efdf8ada025c6494168e1b0ca 819 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 606 5.4E-26 T 21-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 VFU_RS14050 9fc6e38efdf8ada025c6494168e1b0ca 819 Gene3D G3DSA:3.30.360.10 636 791 5.8E-54 T 21-04-2016 VFU_RS14050 9fc6e38efdf8ada025c6494168e1b0ca 819 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 21-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 VFU_RS14050 9fc6e38efdf8ada025c6494168e1b0ca 819 PANTHER PTHR21499:SF1 1 471 9.2E-179 T 21-04-2016 VFU_RS14050 9fc6e38efdf8ada025c6494168e1b0ca 819 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 21-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VFU_RS14050 9fc6e38efdf8ada025c6494168e1b0ca 819 Pfam PF13840 ACT domain 394 456 3.8E-7 T 21-04-2016 IPR027795 GATS-like ACT domain VFU_RS14050 9fc6e38efdf8ada025c6494168e1b0ca 819 Gene3D G3DSA:3.40.50.720 466 635 3.1E-63 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS14050 9fc6e38efdf8ada025c6494168e1b0ca 819 PIRSF PIRSF000727 1 817 0.0 T 21-04-2016 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00050|UniPathway: UPA00051|UniPathway: UPA00051 VFU_RS14050 9fc6e38efdf8ada025c6494168e1b0ca 819 SUPERFAMILY SSF53633 1 298 3.14E-75 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VFU_RS14050 9fc6e38efdf8ada025c6494168e1b0ca 819 SUPERFAMILY SSF51735 463 636 6.47E-38 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS14050 9fc6e38efdf8ada025c6494168e1b0ca 819 PANTHER PTHR21499 1 471 9.2E-179 T 21-04-2016 VFU_RS14050 9fc6e38efdf8ada025c6494168e1b0ca 819 Pfam PF00696 Amino acid kinase family 2 284 1.4E-49 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VFU_RS14050 9fc6e38efdf8ada025c6494168e1b0ca 819 Pfam PF00742 Homoserine dehydrogenase 614 810 6.3E-47 T 21-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 VFU_RS14050 9fc6e38efdf8ada025c6494168e1b0ca 819 SUPERFAMILY SSF55347 614 797 3.33E-50 T 21-04-2016 VFU_RS14050 9fc6e38efdf8ada025c6494168e1b0ca 819 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 3.5E-129 T 21-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VFU_RS14050 9fc6e38efdf8ada025c6494168e1b0ca 819 Gene3D G3DSA:3.40.1160.10 1 49 2.7E-67 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VFU_RS14050 9fc6e38efdf8ada025c6494168e1b0ca 819 Gene3D G3DSA:3.40.1160.10 111 299 2.7E-67 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VFU_RS14050 9fc6e38efdf8ada025c6494168e1b0ca 819 Pfam PF01842 ACT domain 324 380 2.9E-7 T 21-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 VFU_RS14050 9fc6e38efdf8ada025c6494168e1b0ca 819 SUPERFAMILY SSF55021 303 381 1.03E-20 T 21-04-2016 VFU_RS11995 222dc03880683b9a69082cce3286b812 371 Pfam PF01612 3'-5' exonuclease 3 170 1.2E-39 T 21-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VFU_RS11995 222dc03880683b9a69082cce3286b812 371 SUPERFAMILY SSF47819 295 370 3.4E-20 T 21-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 VFU_RS11995 222dc03880683b9a69082cce3286b812 371 SMART SM00474 3 171 1.8E-38 T 21-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VFU_RS11995 222dc03880683b9a69082cce3286b812 371 PANTHER PTHR12124:SF42 1 349 2.8E-83 T 21-04-2016 VFU_RS11995 222dc03880683b9a69082cce3286b812 371 Pfam PF00570 HRDC domain 213 279 5.8E-9 T 21-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 VFU_RS11995 222dc03880683b9a69082cce3286b812 371 PANTHER PTHR12124 1 349 2.8E-83 T 21-04-2016 VFU_RS11995 222dc03880683b9a69082cce3286b812 371 SUPERFAMILY SSF53098 2 209 1.61E-67 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VFU_RS11995 222dc03880683b9a69082cce3286b812 371 TIGRFAM TIGR01388 rnd: ribonuclease D 5 370 3.1E-151 T 21-04-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 VFU_RS11995 222dc03880683b9a69082cce3286b812 371 Hamap MF_01899 Ribonuclease D [rnd]. 3 371 43.062 T 21-04-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 VFU_RS11995 222dc03880683b9a69082cce3286b812 371 Gene3D G3DSA:3.30.420.10 2 178 8.1E-16 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VFU_RS11995 222dc03880683b9a69082cce3286b812 371 SUPERFAMILY SSF47819 191 301 2.4E-23 T 21-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 VFU_RS02105 77c9e6d48bd53d380a0187e3faef8cc0 301 SUPERFAMILY SSF103481 43 144 7.59E-13 T 21-04-2016 VFU_RS02105 77c9e6d48bd53d380a0187e3faef8cc0 301 PANTHER PTHR22911 1 292 1.4E-169 T 21-04-2016 VFU_RS02105 77c9e6d48bd53d380a0187e3faef8cc0 301 Pfam PF00892 EamA-like transporter family 155 286 4.4E-18 T 21-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VFU_RS02105 77c9e6d48bd53d380a0187e3faef8cc0 301 Pfam PF00892 EamA-like transporter family 9 141 3.5E-17 T 21-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VFU_RS02105 77c9e6d48bd53d380a0187e3faef8cc0 301 SUPERFAMILY SSF103481 189 291 1.7E-11 T 21-04-2016 VFU_RS02105 77c9e6d48bd53d380a0187e3faef8cc0 301 PANTHER PTHR22911:SF58 1 292 1.4E-169 T 21-04-2016 VFU_RS00155 3e3e5aabc058786c361d965808159190 353 PANTHER PTHR32120:SF2 4 352 2.2E-157 T 21-04-2016 VFU_RS00155 3e3e5aabc058786c361d965808159190 353 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 40 340 37.473 T 21-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 VFU_RS00155 3e3e5aabc058786c361d965808159190 353 PANTHER PTHR32120 4 352 2.2E-157 T 21-04-2016 VFU_RS00155 3e3e5aabc058786c361d965808159190 353 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 74 334 8.1E-89 T 21-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 VFU_RS00155 3e3e5aabc058786c361d965808159190 353 SUPERFAMILY SSF52540 113 336 6.85E-58 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS00155 3e3e5aabc058786c361d965808159190 353 Gene3D G3DSA:1.10.40.50 276 344 2.5E-24 T 21-04-2016 VFU_RS00155 3e3e5aabc058786c361d965808159190 353 Gene3D G3DSA:3.40.50.300 114 275 4.9E-48 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS00155 3e3e5aabc058786c361d965808159190 353 Pfam PF03193 Protein of unknown function, DUF258 99 276 3.9E-57 T 21-04-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 VFU_RS12740 39cbc54a577a7f0cf7ae00dbfdd90fe7 284 Gene3D G3DSA:3.40.30.10 4 109 4.6E-21 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS12740 39cbc54a577a7f0cf7ae00dbfdd90fe7 284 Pfam PF14559 Tetratricopeptide repeat 124 190 2.3E-14 T 21-04-2016 VFU_RS12740 39cbc54a577a7f0cf7ae00dbfdd90fe7 284 PANTHER PTHR10438:SF288 8 112 7.7E-48 T 21-04-2016 VFU_RS12740 39cbc54a577a7f0cf7ae00dbfdd90fe7 284 PANTHER PTHR10438:SF288 233 254 7.7E-48 T 21-04-2016 VFU_RS12740 39cbc54a577a7f0cf7ae00dbfdd90fe7 284 Gene3D G3DSA:1.25.40.10 110 196 1.4E-27 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VFU_RS12740 39cbc54a577a7f0cf7ae00dbfdd90fe7 284 SUPERFAMILY SSF52833 3 113 1.33E-25 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS12740 39cbc54a577a7f0cf7ae00dbfdd90fe7 284 Pfam PF14561 Tetratricopeptide repeat 195 284 2.8E-26 T 21-04-2016 VFU_RS12740 39cbc54a577a7f0cf7ae00dbfdd90fe7 284 Gene3D G3DSA:1.25.40.10 197 284 1.6E-29 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VFU_RS12740 39cbc54a577a7f0cf7ae00dbfdd90fe7 284 Pfam PF00085 Thioredoxin 8 109 6.1E-15 T 21-04-2016 IPR013766 Thioredoxin domain GO:0045454 VFU_RS12740 39cbc54a577a7f0cf7ae00dbfdd90fe7 284 PANTHER PTHR10438 8 112 7.7E-48 T 21-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VFU_RS12740 39cbc54a577a7f0cf7ae00dbfdd90fe7 284 PANTHER PTHR10438 233 254 7.7E-48 T 21-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VFU_RS00425 ab3092d809e594f8ecb2cdb8df409389 96 SUPERFAMILY SSF46689 8 96 4.3E-22 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS00425 ab3092d809e594f8ecb2cdb8df409389 96 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 1.7E-12 T 21-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VFU_RS00425 ab3092d809e594f8ecb2cdb8df409389 96 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 96 1.7E-12 T 21-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VFU_RS00425 ab3092d809e594f8ecb2cdb8df409389 96 PIRSF PIRSF002097 1 96 2.3E-41 T 21-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VFU_RS00425 ab3092d809e594f8ecb2cdb8df409389 96 PANTHER PTHR32071 19 96 1.1E-25 T 21-04-2016 VFU_RS00425 ab3092d809e594f8ecb2cdb8df409389 96 PRINTS PR01591 DNA-binding protein FIS signature 9 26 1.9E-31 T 21-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VFU_RS00425 ab3092d809e594f8ecb2cdb8df409389 96 PRINTS PR01591 DNA-binding protein FIS signature 26 42 1.9E-31 T 21-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VFU_RS00425 ab3092d809e594f8ecb2cdb8df409389 96 PRINTS PR01591 DNA-binding protein FIS signature 42 57 1.9E-31 T 21-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VFU_RS00425 ab3092d809e594f8ecb2cdb8df409389 96 PRINTS PR01591 DNA-binding protein FIS signature 57 69 1.9E-31 T 21-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VFU_RS00425 ab3092d809e594f8ecb2cdb8df409389 96 Gene3D G3DSA:1.10.10.60 27 96 1.0E-24 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS00425 ab3092d809e594f8ecb2cdb8df409389 96 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 2.6E-13 T 21-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VFU_RS08920 fec5b38396f4544617990da498f13dc4 998 Gene3D G3DSA:1.10.1200.10 512 577 2.6E-21 T 21-04-2016 IPR009081 Phosphopantetheine binding ACP domain VFU_RS08920 fec5b38396f4544617990da498f13dc4 998 ProSitePatterns PS00012 Phosphopantetheine attachment site. 530 545 - T 21-04-2016 IPR006162 Phosphopantetheine attachment site VFU_RS08920 fec5b38396f4544617990da498f13dc4 998 SUPERFAMILY SSF47336 503 572 3.53E-16 T 21-04-2016 IPR009081 Phosphopantetheine binding ACP domain VFU_RS08920 fec5b38396f4544617990da498f13dc4 998 ProSitePatterns PS00455 Putative AMP-binding domain signature. 148 159 - T 21-04-2016 IPR020845 AMP-binding, conserved site VFU_RS08920 fec5b38396f4544617990da498f13dc4 998 Pfam PF13193 AMP-binding enzyme C-terminal domain 407 480 2.7E-8 T 21-04-2016 IPR025110 AMP-binding enzyme C-terminal domain VFU_RS08920 fec5b38396f4544617990da498f13dc4 998 Pfam PF00550 Phosphopantetheine attachment site 508 570 2.1E-14 T 21-04-2016 IPR009081 Phosphopantetheine binding ACP domain VFU_RS08920 fec5b38396f4544617990da498f13dc4 998 PANTHER PTHR24095 8 829 2.6E-176 T 21-04-2016 VFU_RS08920 fec5b38396f4544617990da498f13dc4 998 Gene3D G3DSA:3.40.50.720 616 915 5.1E-33 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS08920 fec5b38396f4544617990da498f13dc4 998 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 29 423 1.9E-114 T 21-04-2016 IPR010071 Amino acid adenylation domain VFU_RS08920 fec5b38396f4544617990da498f13dc4 998 Pfam PF07993 Male sterility protein 619 861 8.5E-53 T 21-04-2016 IPR013120 Male sterility, NAD-binding Reactome: REACT_22258 VFU_RS08920 fec5b38396f4544617990da498f13dc4 998 SUPERFAMILY SSF56801 8 519 2.22E-135 T 21-04-2016 VFU_RS08920 fec5b38396f4544617990da498f13dc4 998 Pfam PF00501 AMP-binding enzyme 8 399 1.9E-89 T 21-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VFU_RS08920 fec5b38396f4544617990da498f13dc4 998 SUPERFAMILY SSF51735 615 913 2.18E-29 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS08920 fec5b38396f4544617990da498f13dc4 998 Gene3D G3DSA:3.40.50.980 7 157 1.1E-44 T 21-04-2016 VFU_RS08920 fec5b38396f4544617990da498f13dc4 998 Gene3D G3DSA:2.30.38.10 310 389 2.4E-25 T 21-04-2016 VFU_RS08920 fec5b38396f4544617990da498f13dc4 998 TIGRFAM TIGR01746 Thioester-redct: thioester reductase domain 616 980 2.1E-98 T 21-04-2016 IPR010080 Thioester reductase-like domain VFU_RS08920 fec5b38396f4544617990da498f13dc4 998 PANTHER PTHR24095:SF137 8 829 2.6E-176 T 21-04-2016 VFU_RS08920 fec5b38396f4544617990da498f13dc4 998 Gene3D G3DSA:3.30.300.30 394 511 2.2E-27 T 21-04-2016 VFU_RS08920 fec5b38396f4544617990da498f13dc4 998 SMART SM00823 Phosphopantetheine attachment site 506 575 8.2E-10 T 21-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 VFU_RS08920 fec5b38396f4544617990da498f13dc4 998 Gene3D G3DSA:3.40.50.980 158 301 8.0E-34 T 21-04-2016 VFU_RS12025 eab4ad2c44c90ec5a3d3ae5fd246f64d 642 PANTHER PTHR11472:SF37 14 624 8.1E-229 T 21-04-2016 VFU_RS12025 eab4ad2c44c90ec5a3d3ae5fd246f64d 642 Gene3D G3DSA:3.40.50.300 452 602 5.2E-7 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS12025 eab4ad2c44c90ec5a3d3ae5fd246f64d 642 SUPERFAMILY SSF52540 42 89 8.36E-12 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS12025 eab4ad2c44c90ec5a3d3ae5fd246f64d 642 SUPERFAMILY SSF52540 480 545 8.36E-12 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS12025 eab4ad2c44c90ec5a3d3ae5fd246f64d 642 SUPERFAMILY SSF52540 576 602 8.36E-12 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS12025 eab4ad2c44c90ec5a3d3ae5fd246f64d 642 SMART SM00491 477 606 3.2E-46 T 21-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VFU_RS12025 eab4ad2c44c90ec5a3d3ae5fd246f64d 642 Pfam PF13307 Helicase C-terminal domain 462 619 1.3E-35 T 21-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VFU_RS12025 eab4ad2c44c90ec5a3d3ae5fd246f64d 642 Gene3D G3DSA:3.40.50.300 193 253 7.4E-19 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS12025 eab4ad2c44c90ec5a3d3ae5fd246f64d 642 Gene3D G3DSA:3.40.50.300 30 117 7.4E-19 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS12025 eab4ad2c44c90ec5a3d3ae5fd246f64d 642 SMART SM00487 17 312 0.0062 T 21-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VFU_RS12025 eab4ad2c44c90ec5a3d3ae5fd246f64d 642 Pfam PF04851 Type III restriction enzyme, res subunit 19 236 1.9E-5 T 21-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VFU_RS12025 eab4ad2c44c90ec5a3d3ae5fd246f64d 642 PANTHER PTHR11472 14 624 8.1E-229 T 21-04-2016 VFU_RS12025 eab4ad2c44c90ec5a3d3ae5fd246f64d 642 SUPERFAMILY SSF52540 14 235 1.19E-24 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS12675 28e5e462537f9255faf43fd17e88111c 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 21-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VFU_RS12675 28e5e462537f9255faf43fd17e88111c 214 PANTHER PTHR23359 1 213 5.5E-111 T 21-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VFU_RS12675 28e5e462537f9255faf43fd17e88111c 214 PRINTS PR00094 Adenylate kinase signature 156 171 8.9E-36 T 21-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VFU_RS12675 28e5e462537f9255faf43fd17e88111c 214 PRINTS PR00094 Adenylate kinase signature 4 17 8.9E-36 T 21-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VFU_RS12675 28e5e462537f9255faf43fd17e88111c 214 PRINTS PR00094 Adenylate kinase signature 173 187 8.9E-36 T 21-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VFU_RS12675 28e5e462537f9255faf43fd17e88111c 214 PRINTS PR00094 Adenylate kinase signature 81 97 8.9E-36 T 21-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VFU_RS12675 28e5e462537f9255faf43fd17e88111c 214 PRINTS PR00094 Adenylate kinase signature 32 46 8.9E-36 T 21-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VFU_RS12675 28e5e462537f9255faf43fd17e88111c 214 Pfam PF00406 Adenylate kinase 5 185 5.6E-60 T 21-04-2016 VFU_RS12675 28e5e462537f9255faf43fd17e88111c 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 52.318 T 21-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VFU_RS12675 28e5e462537f9255faf43fd17e88111c 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 1.4E-75 T 21-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VFU_RS12675 28e5e462537f9255faf43fd17e88111c 214 SUPERFAMILY SSF52540 1 186 5.54E-45 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS12675 28e5e462537f9255faf43fd17e88111c 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 1.2E-14 T 21-04-2016 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VFU_RS12675 28e5e462537f9255faf43fd17e88111c 214 Gene3D G3DSA:3.40.50.300 1 213 2.6E-81 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS03900 cfcba0830017387f68fc0886596a8f4a 320 Gene3D G3DSA:2.60.120.330 3 312 1.1E-97 T 21-04-2016 IPR027443 Isopenicillin N synthase-like VFU_RS03900 cfcba0830017387f68fc0886596a8f4a 320 PRINTS PR00682 Isopenicillin N synthase signature 193 214 3.9E-14 T 21-04-2016 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 VFU_RS03900 cfcba0830017387f68fc0886596a8f4a 320 PRINTS PR00682 Isopenicillin N synthase signature 26 43 3.9E-14 T 21-04-2016 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 VFU_RS03900 cfcba0830017387f68fc0886596a8f4a 320 PRINTS PR00682 Isopenicillin N synthase signature 229 255 3.9E-14 T 21-04-2016 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 VFU_RS03900 cfcba0830017387f68fc0886596a8f4a 320 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 3 127 8.1E-31 T 21-04-2016 IPR026992 Non-haem dioxygenase N-terminal domain VFU_RS03900 cfcba0830017387f68fc0886596a8f4a 320 PANTHER PTHR10209 1 314 3.7E-110 T 21-04-2016 VFU_RS03900 cfcba0830017387f68fc0886596a8f4a 320 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 173 270 2.9E-24 T 21-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 VFU_RS03900 cfcba0830017387f68fc0886596a8f4a 320 SUPERFAMILY SSF51197 3 311 1.1E-90 T 21-04-2016 VFU_RS03900 cfcba0830017387f68fc0886596a8f4a 320 PANTHER PTHR10209:SF68 1 314 3.7E-110 T 21-04-2016 VFU_RS01685 5a19f6583c31be4c2ad288090214d010 324 PIRSF PIRSF000371 6 319 9.3E-92 T 21-04-2016 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 VFU_RS01685 5a19f6583c31be4c2ad288090214d010 324 ProSitePatterns PS01087 Radical activating enzymes signature. 28 49 - T 21-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 VFU_RS01685 5a19f6583c31be4c2ad288090214d010 324 Gene3D G3DSA:3.80.30.10 142 318 1.9E-50 T 21-04-2016 VFU_RS01685 5a19f6583c31be4c2ad288090214d010 324 PANTHER PTHR30352:SF4 12 69 7.0E-86 T 21-04-2016 VFU_RS01685 5a19f6583c31be4c2ad288090214d010 324 PANTHER PTHR30352:SF4 119 321 7.0E-86 T 21-04-2016 VFU_RS01685 5a19f6583c31be4c2ad288090214d010 324 Gene3D G3DSA:3.30.70.20 74 115 6.1E-10 T 21-04-2016 VFU_RS01685 5a19f6583c31be4c2ad288090214d010 324 Pfam PF13353 4Fe-4S single cluster domain 27 195 4.9E-10 T 21-04-2016 VFU_RS01685 5a19f6583c31be4c2ad288090214d010 324 Pfam PF04055 Radical SAM superfamily 35 247 6.5E-24 T 21-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VFU_RS01685 5a19f6583c31be4c2ad288090214d010 324 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 66 77 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VFU_RS01685 5a19f6583c31be4c2ad288090214d010 324 TIGRFAM TIGR04395 cutC_activ_rSAM: choline TMA-lyase-activating enzyme 12 324 1.8E-118 T 21-04-2016 IPR030905 Choline TMA-lyase-activating enzyme UniPathway: UPA00117 VFU_RS01685 5a19f6583c31be4c2ad288090214d010 324 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 17 315 3.4E-109 T 21-04-2016 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 VFU_RS01685 5a19f6583c31be4c2ad288090214d010 324 PANTHER PTHR30352 12 69 7.0E-86 T 21-04-2016 VFU_RS01685 5a19f6583c31be4c2ad288090214d010 324 PANTHER PTHR30352 119 321 7.0E-86 T 21-04-2016 VFU_RS01685 5a19f6583c31be4c2ad288090214d010 324 Gene3D G3DSA:3.30.70.20 40 73 2.5E-5 T 21-04-2016 VFU_RS01685 5a19f6583c31be4c2ad288090214d010 324 SUPERFAMILY SSF54862 15 162 1.4E-20 T 21-04-2016 VFU_RS01685 5a19f6583c31be4c2ad288090214d010 324 SUPERFAMILY SSF102114 100 295 5.69E-12 T 21-04-2016 VFU_RS03830 d6d253c5bd9db89f50fb10f83285831f 135 PANTHER PTHR38097 2 135 7.8E-56 T 21-04-2016 VFU_RS03830 d6d253c5bd9db89f50fb10f83285831f 135 SUPERFAMILY SSF81273 2 58 3.34E-16 T 21-04-2016 VFU_RS03830 d6d253c5bd9db89f50fb10f83285831f 135 SMART SM00528 88 135 1.5E-22 T 21-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 VFU_RS03830 d6d253c5bd9db89f50fb10f83285831f 135 PIRSF PIRSF002096 1 135 1.5E-50 T 21-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 VFU_RS03830 d6d253c5bd9db89f50fb10f83285831f 135 Gene3D G3DSA:1.10.287.1050 1 58 6.7E-17 T 21-04-2016 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 VFU_RS03830 d6d253c5bd9db89f50fb10f83285831f 135 PANTHER PTHR38097:SF2 2 135 7.8E-56 T 21-04-2016 VFU_RS03830 d6d253c5bd9db89f50fb10f83285831f 135 Pfam PF00816 H-NS histone family 33 128 1.8E-18 T 21-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 VFU_RS03830 d6d253c5bd9db89f50fb10f83285831f 135 SUPERFAMILY SSF81273 93 135 4.71E-12 T 21-04-2016 VFU_RS03830 d6d253c5bd9db89f50fb10f83285831f 135 Gene3D G3DSA:4.10.430.10 92 135 9.1E-25 T 21-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 VFU_RS10645 488792bc7bd8b072c84716e9c8d97457 303 Gene3D G3DSA:3.40.190.10 103 178 6.8E-13 T 21-04-2016 VFU_RS10645 488792bc7bd8b072c84716e9c8d97457 303 Gene3D G3DSA:3.40.190.10 179 259 1.3E-15 T 21-04-2016 VFU_RS10645 488792bc7bd8b072c84716e9c8d97457 303 PANTHER PTHR30537:SF5 1 300 2.5E-73 T 21-04-2016 VFU_RS10645 488792bc7bd8b072c84716e9c8d97457 303 SUPERFAMILY SSF53850 88 296 1.32E-34 T 21-04-2016 VFU_RS10645 488792bc7bd8b072c84716e9c8d97457 303 SUPERFAMILY SSF46785 3 88 1.72E-19 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS10645 488792bc7bd8b072c84716e9c8d97457 303 PANTHER PTHR30537 1 300 2.5E-73 T 21-04-2016 VFU_RS10645 488792bc7bd8b072c84716e9c8d97457 303 Gene3D G3DSA:1.10.10.10 1 88 1.0E-21 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS10645 488792bc7bd8b072c84716e9c8d97457 303 Pfam PF03466 LysR substrate binding domain 88 293 8.9E-31 T 21-04-2016 IPR005119 LysR, substrate-binding VFU_RS10645 488792bc7bd8b072c84716e9c8d97457 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.7E-16 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS03605 bc790c35b683504ba7d2ae72f1e3ca5c 151 SUPERFAMILY SSF55804 1 146 8.11E-41 T 21-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 VFU_RS03605 bc790c35b683504ba7d2ae72f1e3ca5c 151 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 21-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VFU_RS03605 bc790c35b683504ba7d2ae72f1e3ca5c 151 Gene3D G3DSA:3.40.930.10 1 148 5.7E-46 T 21-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VFU_RS03605 bc790c35b683504ba7d2ae72f1e3ca5c 151 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 2 146 5.7E-53 T 21-04-2016 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VFU_RS03605 bc790c35b683504ba7d2ae72f1e3ca5c 151 PANTHER PTHR30505:SF6 1 151 8.1E-76 T 21-04-2016 VFU_RS03605 bc790c35b683504ba7d2ae72f1e3ca5c 151 PANTHER PTHR30505 1 151 8.1E-76 T 21-04-2016 VFU_RS03605 bc790c35b683504ba7d2ae72f1e3ca5c 151 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 9 145 3.3E-37 T 21-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VFU_RS01250 8248dfc183500f48137a637d01462125 190 PANTHER PTHR30173 56 190 2.8E-26 T 21-04-2016 VFU_RS01250 8248dfc183500f48137a637d01462125 190 PANTHER PTHR30173 7 40 2.8E-26 T 21-04-2016 VFU_RS01250 8248dfc183500f48137a637d01462125 190 SUPERFAMILY SSF88659 127 188 4.11E-5 T 21-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS01250 8248dfc183500f48137a637d01462125 190 PANTHER PTHR30173:SF5 56 190 2.8E-26 T 21-04-2016 VFU_RS01250 8248dfc183500f48137a637d01462125 190 PANTHER PTHR30173:SF5 7 40 2.8E-26 T 21-04-2016 VFU_RS01250 8248dfc183500f48137a637d01462125 190 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 187 8.0E-15 T 21-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS01250 8248dfc183500f48137a637d01462125 190 Pfam PF07638 ECF sigma factor 6 189 1.1E-30 T 21-04-2016 IPR011517 RNA polymerase sigma-70 ECF-like VFU_RS01250 8248dfc183500f48137a637d01462125 190 TIGRFAM TIGR02999 Sig-70_X6: RNA polymerase sigma factor, TIGR02999 family 4 189 9.8E-53 T 21-04-2016 IPR011517 RNA polymerase sigma-70 ECF-like VFU_RS05710 0a9da7610dfbcaa7f3bab1d54fd02935 127 Pfam PF04247 Invasion gene expression up-regulator, SirB 2 123 5.6E-38 T 21-04-2016 IPR007360 Invasion gene expression up-regulator, SirB VFU_RS05710 0a9da7610dfbcaa7f3bab1d54fd02935 127 PIRSF PIRSF005610 1 121 3.0E-18 T 21-04-2016 IPR007360 Invasion gene expression up-regulator, SirB VFU_RS05710 0a9da7610dfbcaa7f3bab1d54fd02935 127 PANTHER PTHR39594 1 127 7.6E-42 T 21-04-2016 VFU_RS04365 b6f767de14efc8821603f5db3351a7d4 264 PANTHER PTHR20881:SF3 1 262 3.8E-185 T 21-04-2016 VFU_RS04365 b6f767de14efc8821603f5db3351a7d4 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 262 3.4E-113 T 21-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 VFU_RS04365 b6f767de14efc8821603f5db3351a7d4 264 PANTHER PTHR20881 1 262 3.8E-185 T 21-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 VFU_RS04365 b6f767de14efc8821603f5db3351a7d4 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 41.772 T 21-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 VFU_RS04365 b6f767de14efc8821603f5db3351a7d4 264 Gene3D G3DSA:3.20.20.60 1 262 8.2E-112 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VFU_RS04365 b6f767de14efc8821603f5db3351a7d4 264 SUPERFAMILY SSF51621 3 262 3.65E-106 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VFU_RS04365 b6f767de14efc8821603f5db3351a7d4 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 258 8.0E-109 T 21-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 VFU_RS04365 b6f767de14efc8821603f5db3351a7d4 264 PIRSF PIRSF000388 1 264 1.9E-102 T 21-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 VFU_RS00010 b1eb81abcd11a063e0d965f4ec9c43e7 698 Pfam PF00679 Elongation factor G C-terminus 605 691 8.2E-31 T 21-04-2016 IPR000640 Translation elongation factor EFG, V domain VFU_RS00010 b1eb81abcd11a063e0d965f4ec9c43e7 698 SUPERFAMILY SSF52540 6 288 5.18E-108 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS00010 b1eb81abcd11a063e0d965f4ec9c43e7 698 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 4.0E-68 T 21-04-2016 VFU_RS00010 b1eb81abcd11a063e0d965f4ec9c43e7 698 Pfam PF03144 Elongation factor Tu domain 2 329 396 5.3E-18 T 21-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 VFU_RS00010 b1eb81abcd11a063e0d965f4ec9c43e7 698 SMART SM00838 605 693 7.6E-58 T 21-04-2016 IPR000640 Translation elongation factor EFG, V domain VFU_RS00010 b1eb81abcd11a063e0d965f4ec9c43e7 698 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 8.7E-35 T 21-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VFU_RS00010 b1eb81abcd11a063e0d965f4ec9c43e7 698 Gene3D G3DSA:2.40.30.10 310 410 1.6E-39 T 21-04-2016 VFU_RS00010 b1eb81abcd11a063e0d965f4ec9c43e7 698 PANTHER PTHR23115 261 289 0.0 T 21-04-2016 VFU_RS00010 b1eb81abcd11a063e0d965f4ec9c43e7 698 Gene3D G3DSA:3.30.230.10 489 604 3.9E-52 T 21-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VFU_RS00010 b1eb81abcd11a063e0d965f4ec9c43e7 698 SUPERFAMILY SSF54980 407 485 8.63E-25 T 21-04-2016 IPR009022 Elongation factor G, III-V domain VFU_RS00010 b1eb81abcd11a063e0d965f4ec9c43e7 698 Gene3D G3DSA:3.40.50.300 6 293 9.3E-106 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS00010 b1eb81abcd11a063e0d965f4ec9c43e7 698 Hamap MF_00054_B Elongation factor G [fusA]. 6 697 111.694 T 21-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 VFU_RS00010 b1eb81abcd11a063e0d965f4ec9c43e7 698 SUPERFAMILY SSF54211 484 604 6.07E-47 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VFU_RS00010 b1eb81abcd11a063e0d965f4ec9c43e7 698 PRINTS PR00315 GTP-binding elongation factor signature 101 112 9.4E-17 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VFU_RS00010 b1eb81abcd11a063e0d965f4ec9c43e7 698 PRINTS PR00315 GTP-binding elongation factor signature 12 25 9.4E-17 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VFU_RS00010 b1eb81abcd11a063e0d965f4ec9c43e7 698 PRINTS PR00315 GTP-binding elongation factor signature 85 95 9.4E-17 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VFU_RS00010 b1eb81abcd11a063e0d965f4ec9c43e7 698 PRINTS PR00315 GTP-binding elongation factor signature 137 146 9.4E-17 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VFU_RS00010 b1eb81abcd11a063e0d965f4ec9c43e7 698 PRINTS PR00315 GTP-binding elongation factor signature 58 66 9.4E-17 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VFU_RS00010 b1eb81abcd11a063e0d965f4ec9c43e7 698 SUPERFAMILY SSF54980 608 695 1.1E-29 T 21-04-2016 IPR009022 Elongation factor G, III-V domain VFU_RS00010 b1eb81abcd11a063e0d965f4ec9c43e7 698 PANTHER PTHR23115 6 184 0.0 T 21-04-2016 VFU_RS00010 b1eb81abcd11a063e0d965f4ec9c43e7 698 PANTHER PTHR23115 308 697 0.0 T 21-04-2016 VFU_RS00010 b1eb81abcd11a063e0d965f4ec9c43e7 698 PANTHER PTHR23115:SF66 308 697 0.0 T 21-04-2016 VFU_RS00010 b1eb81abcd11a063e0d965f4ec9c43e7 698 PANTHER PTHR23115:SF66 261 289 0.0 T 21-04-2016 VFU_RS00010 b1eb81abcd11a063e0d965f4ec9c43e7 698 Pfam PF14492 Elongation Factor G, domain II 409 483 1.3E-33 T 21-04-2016 IPR009022 Elongation factor G, III-V domain VFU_RS00010 b1eb81abcd11a063e0d965f4ec9c43e7 698 Pfam PF03764 Elongation factor G, domain IV 484 603 9.5E-48 T 21-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VFU_RS00010 b1eb81abcd11a063e0d965f4ec9c43e7 698 SMART SM00889 485 603 1.6E-75 T 21-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VFU_RS00010 b1eb81abcd11a063e0d965f4ec9c43e7 698 PANTHER PTHR23115:SF66 6 184 0.0 T 21-04-2016 VFU_RS00010 b1eb81abcd11a063e0d965f4ec9c43e7 698 Gene3D G3DSA:3.30.70.870 411 485 1.6E-38 T 21-04-2016 VFU_RS00010 b1eb81abcd11a063e0d965f4ec9c43e7 698 SUPERFAMILY SSF50447 271 409 2.08E-36 T 21-04-2016 IPR009000 Translation protein, beta-barrel domain VFU_RS00010 b1eb81abcd11a063e0d965f4ec9c43e7 698 Gene3D G3DSA:3.30.70.240 605 691 5.6E-33 T 21-04-2016 IPR000640 Translation elongation factor EFG, V domain VFU_RS00010 b1eb81abcd11a063e0d965f4ec9c43e7 698 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 21-04-2016 IPR031157 Tr-type G domain, conserved site VFU_RS00010 b1eb81abcd11a063e0d965f4ec9c43e7 698 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 697 0.0 T 21-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 VFU_RS02640 0baaeea9cb41a0429bb229aa5a4511bb 195 PANTHER PTHR10072 150 192 1.1E-86 T 21-04-2016 VFU_RS02640 0baaeea9cb41a0429bb229aa5a4511bb 195 Pfam PF01106 NifU-like domain 114 180 2.9E-19 T 21-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 VFU_RS02640 0baaeea9cb41a0429bb229aa5a4511bb 195 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 4 195 44.614 T 21-04-2016 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 VFU_RS02640 0baaeea9cb41a0429bb229aa5a4511bb 195 SUPERFAMILY SSF117916 98 187 1.59E-22 T 21-04-2016 VFU_RS02640 0baaeea9cb41a0429bb229aa5a4511bb 195 Gene3D G3DSA:2.60.300.12 4 100 5.8E-19 T 21-04-2016 IPR000361 FeS cluster biogenesis VFU_RS02640 0baaeea9cb41a0429bb229aa5a4511bb 195 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 122 181 2.0E-26 T 21-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 VFU_RS02640 0baaeea9cb41a0429bb229aa5a4511bb 195 PANTHER PTHR10072 5 100 1.1E-86 T 21-04-2016 VFU_RS02640 0baaeea9cb41a0429bb229aa5a4511bb 195 Pfam PF01521 Iron-sulphur cluster biosynthesis 5 102 1.5E-12 T 21-04-2016 IPR000361 FeS cluster biogenesis VFU_RS02640 0baaeea9cb41a0429bb229aa5a4511bb 195 PANTHER PTHR10072:SF37 5 100 1.1E-86 T 21-04-2016 VFU_RS02640 0baaeea9cb41a0429bb229aa5a4511bb 195 PANTHER PTHR10072:SF37 150 192 1.1E-86 T 21-04-2016 VFU_RS02640 0baaeea9cb41a0429bb229aa5a4511bb 195 SUPERFAMILY SSF89360 4 100 3.73E-22 T 21-04-2016 IPR000361 FeS cluster biogenesis VFU_RS02640 0baaeea9cb41a0429bb229aa5a4511bb 195 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 5 195 6.4E-96 T 21-04-2016 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 VFU_RS10310 84d0cb1f64a39eff0a2177520dca365b 461 Gene3D G3DSA:1.10.3860.10 23 446 9.6E-95 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VFU_RS10310 84d0cb1f64a39eff0a2177520dca365b 461 SUPERFAMILY SSF118215 29 441 6.93E-91 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VFU_RS10310 84d0cb1f64a39eff0a2177520dca365b 461 PANTHER PTHR11958:SF5 22 454 1.0E-238 T 21-04-2016 VFU_RS10310 84d0cb1f64a39eff0a2177520dca365b 461 Pfam PF00375 Sodium:dicarboxylate symporter family 32 441 1.8E-97 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VFU_RS10310 84d0cb1f64a39eff0a2177520dca365b 461 PRINTS PR00173 Glutamate-aspartate symporter signature 396 416 2.2E-29 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VFU_RS10310 84d0cb1f64a39eff0a2177520dca365b 461 PRINTS PR00173 Glutamate-aspartate symporter signature 181 203 2.2E-29 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VFU_RS10310 84d0cb1f64a39eff0a2177520dca365b 461 PRINTS PR00173 Glutamate-aspartate symporter signature 259 278 2.2E-29 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VFU_RS10310 84d0cb1f64a39eff0a2177520dca365b 461 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 2.2E-29 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VFU_RS10310 84d0cb1f64a39eff0a2177520dca365b 461 PRINTS PR00173 Glutamate-aspartate symporter signature 369 388 2.2E-29 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VFU_RS10310 84d0cb1f64a39eff0a2177520dca365b 461 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 2.2E-29 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VFU_RS10310 84d0cb1f64a39eff0a2177520dca365b 461 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 2.2E-29 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VFU_RS10310 84d0cb1f64a39eff0a2177520dca365b 461 PANTHER PTHR11958 22 454 1.0E-238 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VFU_RS02810 3609759bd55ef993cbc3b325ca36492f 435 PANTHER PTHR36106:SF2 1 435 2.6E-294 T 21-04-2016 VFU_RS02810 3609759bd55ef993cbc3b325ca36492f 435 PIRSF PIRSF004539 1 435 4.8E-178 T 21-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VFU_RS02810 3609759bd55ef993cbc3b325ca36492f 435 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 433 1.6E-178 T 21-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VFU_RS02810 3609759bd55ef993cbc3b325ca36492f 435 PANTHER PTHR36106 1 435 2.6E-294 T 21-04-2016 VFU_RS02810 3609759bd55ef993cbc3b325ca36492f 435 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 367 6.4E-145 T 21-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VFU_RS13865 e74dca4d207399b94459d24d752ebd8b 486 Pfam PF00437 Type II/IV secretion system protein 135 412 1.3E-86 T 21-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VFU_RS13865 e74dca4d207399b94459d24d752ebd8b 486 PANTHER PTHR30258:SF3 32 483 1.3E-130 T 21-04-2016 VFU_RS13865 e74dca4d207399b94459d24d752ebd8b 486 Gene3D G3DSA:3.40.50.300 233 451 4.0E-67 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS13865 e74dca4d207399b94459d24d752ebd8b 486 SUPERFAMILY SSF52540 118 449 7.02E-65 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS13865 e74dca4d207399b94459d24d752ebd8b 486 Gene3D G3DSA:3.30.450.90 132 229 1.3E-37 T 21-04-2016 VFU_RS13865 e74dca4d207399b94459d24d752ebd8b 486 PANTHER PTHR30258 32 483 1.3E-130 T 21-04-2016 VFU_RS13900 fd6514c66b171ec4b7727fb1eac835f2 249 Pfam PF08666 SAF domain 45 105 2.4E-7 T 21-04-2016 IPR013974 SAF domain VFU_RS13900 fd6514c66b171ec4b7727fb1eac835f2 249 SMART SM00858 44 106 5.4E-8 T 21-04-2016 IPR013974 SAF domain VFU_RS13900 fd6514c66b171ec4b7727fb1eac835f2 249 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 7 223 1.0E-71 T 21-04-2016 IPR017592 Pilus assembly, Flp-type CpaB VFU_RS13900 fd6514c66b171ec4b7727fb1eac835f2 249 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 113 215 1.3E-28 T 21-04-2016 IPR031571 Flp pilus assembly protein RcpC/CpaB domain VFU_RS06010 c23eb0cce4f202474af2cc8f001f72ff 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 21-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VFU_RS06010 c23eb0cce4f202474af2cc8f001f72ff 361 SUPERFAMILY SSF103263 4 356 9.81E-150 T 21-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VFU_RS06010 c23eb0cce4f202474af2cc8f001f72ff 361 Gene3D G3DSA:3.60.150.10 9 352 1.7E-161 T 21-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VFU_RS06010 c23eb0cce4f202474af2cc8f001f72ff 361 PANTHER PTHR21085 2 352 2.0E-221 T 21-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VFU_RS06010 c23eb0cce4f202474af2cc8f001f72ff 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 37.576 T 21-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VFU_RS06010 c23eb0cce4f202474af2cc8f001f72ff 361 PIRSF PIRSF001456 3 360 4.6E-142 T 21-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VFU_RS06010 c23eb0cce4f202474af2cc8f001f72ff 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 2.2E-142 T 21-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VFU_RS06010 c23eb0cce4f202474af2cc8f001f72ff 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 21-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VFU_RS06010 c23eb0cce4f202474af2cc8f001f72ff 361 Pfam PF01264 Chorismate synthase 10 345 4.2E-143 T 21-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VFU_RS09645 7c0e7a69be7283491f5cce27ff21b69d 265 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 93 255 4.8E-20 T 21-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 VFU_RS09645 7c0e7a69be7283491f5cce27ff21b69d 265 SUPERFAMILY SSF56529 4 258 2.09E-79 T 21-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 VFU_RS09645 7c0e7a69be7283491f5cce27ff21b69d 265 PANTHER PTHR30143 3 264 5.9E-83 T 21-04-2016 VFU_RS09645 7c0e7a69be7283491f5cce27ff21b69d 265 Gene3D G3DSA:3.90.850.10 2 258 1.2E-88 T 21-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 VFU_RS02210 e21ed6c9fcf8090661b32bbcc8da769c 312 Gene3D G3DSA:3.40.190.10 4 111 2.9E-49 T 21-04-2016 VFU_RS02210 e21ed6c9fcf8090661b32bbcc8da769c 312 SUPERFAMILY SSF53850 6 220 6.29E-86 T 21-04-2016 VFU_RS02210 e21ed6c9fcf8090661b32bbcc8da769c 312 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 6 298 39.677 T 21-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VFU_RS02210 e21ed6c9fcf8090661b32bbcc8da769c 312 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 7 298 1.6E-113 T 21-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VFU_RS02210 e21ed6c9fcf8090661b32bbcc8da769c 312 SUPERFAMILY SSF54782 222 310 3.4E-27 T 21-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VFU_RS02210 e21ed6c9fcf8090661b32bbcc8da769c 312 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 232 248 - T 21-04-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VFU_RS02210 e21ed6c9fcf8090661b32bbcc8da769c 312 PRINTS PR00151 Porphobilinogen deaminase signature 231 248 1.2E-47 T 21-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VFU_RS02210 e21ed6c9fcf8090661b32bbcc8da769c 312 PRINTS PR00151 Porphobilinogen deaminase signature 77 96 1.2E-47 T 21-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VFU_RS02210 e21ed6c9fcf8090661b32bbcc8da769c 312 PRINTS PR00151 Porphobilinogen deaminase signature 46 66 1.2E-47 T 21-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VFU_RS02210 e21ed6c9fcf8090661b32bbcc8da769c 312 PRINTS PR00151 Porphobilinogen deaminase signature 144 161 1.2E-47 T 21-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VFU_RS02210 e21ed6c9fcf8090661b32bbcc8da769c 312 PRINTS PR00151 Porphobilinogen deaminase signature 125 142 1.2E-47 T 21-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VFU_RS02210 e21ed6c9fcf8090661b32bbcc8da769c 312 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 228 296 7.0E-20 T 21-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VFU_RS02210 e21ed6c9fcf8090661b32bbcc8da769c 312 PIRSF PIRSF001438 1 312 1.0E-120 T 21-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VFU_RS02210 e21ed6c9fcf8090661b32bbcc8da769c 312 Gene3D G3DSA:3.30.160.40 222 306 3.2E-27 T 21-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VFU_RS02210 e21ed6c9fcf8090661b32bbcc8da769c 312 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 7 213 3.1E-79 T 21-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VFU_RS02210 e21ed6c9fcf8090661b32bbcc8da769c 312 PANTHER PTHR11557 7 312 4.6E-164 T 21-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VFU_RS02210 e21ed6c9fcf8090661b32bbcc8da769c 312 Gene3D G3DSA:3.40.190.10 112 200 2.5E-40 T 21-04-2016 VFU_RS14825 138e5d1ba4f70ce09bfc7996c48306bd 318 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 311 1.9E-139 T 21-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 VFU_RS14825 138e5d1ba4f70ce09bfc7996c48306bd 318 SUPERFAMILY SSF56059 123 313 4.86E-60 T 21-04-2016 VFU_RS14825 138e5d1ba4f70ce09bfc7996c48306bd 318 Hamap MF_00162 Glutathione synthetase [gshB]. 1 316 178.615 T 21-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 VFU_RS14825 138e5d1ba4f70ce09bfc7996c48306bd 318 Gene3D G3DSA:3.30.470.20 192 299 2.9E-50 T 21-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VFU_RS14825 138e5d1ba4f70ce09bfc7996c48306bd 318 PANTHER PTHR21621 1 314 1.8E-163 T 21-04-2016 VFU_RS14825 138e5d1ba4f70ce09bfc7996c48306bd 318 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 8.9E-81 T 21-04-2016 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 VFU_RS14825 138e5d1ba4f70ce09bfc7996c48306bd 318 Gene3D G3DSA:3.30.1490.20 137 191 2.0E-31 T 21-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VFU_RS14825 138e5d1ba4f70ce09bfc7996c48306bd 318 SUPERFAMILY SSF52440 2 122 1.73E-46 T 21-04-2016 IPR016185 Pre-ATP-grasp domain VFU_RS14825 138e5d1ba4f70ce09bfc7996c48306bd 318 Gene3D G3DSA:3.40.50.20 2 129 5.4E-56 T 21-04-2016 IPR016185 Pre-ATP-grasp domain VFU_RS14825 138e5d1ba4f70ce09bfc7996c48306bd 318 PANTHER PTHR21621:SF4 1 314 1.8E-163 T 21-04-2016 VFU_RS14825 138e5d1ba4f70ce09bfc7996c48306bd 318 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 8.2E-48 T 21-04-2016 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 VFU_RS09420 6b81e2059fee3fbde8813dc0d8a5a276 638 Pfam PF00005 ABC transporter 19 185 3.2E-24 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS09420 6b81e2059fee3fbde8813dc0d8a5a276 638 Pfam PF00005 ABC transporter 336 469 1.8E-25 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS09420 6b81e2059fee3fbde8813dc0d8a5a276 638 SUPERFAMILY SSF52540 310 518 1.68E-45 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS09420 6b81e2059fee3fbde8813dc0d8a5a276 638 PANTHER PTHR19211 1 574 2.3E-241 T 21-04-2016 VFU_RS09420 6b81e2059fee3fbde8813dc0d8a5a276 638 Gene3D G3DSA:3.40.50.300 2 271 8.8E-51 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS09420 6b81e2059fee3fbde8813dc0d8a5a276 638 Gene3D G3DSA:3.40.50.300 318 539 1.6E-47 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS09420 6b81e2059fee3fbde8813dc0d8a5a276 638 Pfam PF12848 ABC transporter 224 294 5.1E-12 T 21-04-2016 IPR032781 ABC-transporter extension domain VFU_RS09420 6b81e2059fee3fbde8813dc0d8a5a276 638 SMART SM00382 28 230 1.2E-14 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS09420 6b81e2059fee3fbde8813dc0d8a5a276 638 SMART SM00382 344 514 1.4E-13 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS09420 6b81e2059fee3fbde8813dc0d8a5a276 638 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS09420 6b81e2059fee3fbde8813dc0d8a5a276 638 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS09420 6b81e2059fee3fbde8813dc0d8a5a276 638 Pfam PF16326 ABC transporter C-terminal domain 564 633 8.8E-22 T 21-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 VFU_RS09420 6b81e2059fee3fbde8813dc0d8a5a276 638 SUPERFAMILY SSF52540 126 240 5.59E-47 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS09420 6b81e2059fee3fbde8813dc0d8a5a276 638 SUPERFAMILY SSF52540 3 94 5.59E-47 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS09420 6b81e2059fee3fbde8813dc0d8a5a276 638 PANTHER PTHR19211:SF45 1 574 2.3E-241 T 21-04-2016 VFU_RS03705 4fbdf342862a2ed4c6deb04077c305a1 334 SUPERFAMILY SSF53671 4 333 3.93E-97 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VFU_RS03705 4fbdf342862a2ed4c6deb04077c305a1 334 Gene3D G3DSA:3.40.50.1370 144 319 6.4E-72 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VFU_RS03705 4fbdf342862a2ed4c6deb04077c305a1 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 157 330 1.4E-54 T 21-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 VFU_RS03705 4fbdf342862a2ed4c6deb04077c305a1 334 Gene3D G3DSA:3.40.50.1370 5 143 3.7E-55 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VFU_RS03705 4fbdf342862a2ed4c6deb04077c305a1 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 230 240 1.2E-31 T 21-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VFU_RS03705 4fbdf342862a2ed4c6deb04077c305a1 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 1.2E-31 T 21-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VFU_RS03705 4fbdf342862a2ed4c6deb04077c305a1 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 1.2E-31 T 21-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VFU_RS03705 4fbdf342862a2ed4c6deb04077c305a1 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 1.2E-31 T 21-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VFU_RS03705 4fbdf342862a2ed4c6deb04077c305a1 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 1.2E-31 T 21-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VFU_RS03705 4fbdf342862a2ed4c6deb04077c305a1 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 332 1.6E-131 T 21-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VFU_RS03705 4fbdf342862a2ed4c6deb04077c305a1 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 333 81.729 T 21-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VFU_RS03705 4fbdf342862a2ed4c6deb04077c305a1 334 PANTHER PTHR11405:SF44 1 277 9.7E-205 T 21-04-2016 VFU_RS03705 4fbdf342862a2ed4c6deb04077c305a1 334 PANTHER PTHR11405:SF44 297 333 9.7E-205 T 21-04-2016 VFU_RS03705 4fbdf342862a2ed4c6deb04077c305a1 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 4.9E-25 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VFU_RS03705 4fbdf342862a2ed4c6deb04077c305a1 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 4.9E-25 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VFU_RS03705 4fbdf342862a2ed4c6deb04077c305a1 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 4.9E-25 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VFU_RS03705 4fbdf342862a2ed4c6deb04077c305a1 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 4.9E-25 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VFU_RS03705 4fbdf342862a2ed4c6deb04077c305a1 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 2.0E-45 T 21-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 VFU_RS03705 4fbdf342862a2ed4c6deb04077c305a1 334 PANTHER PTHR11405 1 277 9.7E-205 T 21-04-2016 VFU_RS03705 4fbdf342862a2ed4c6deb04077c305a1 334 PANTHER PTHR11405 297 333 9.7E-205 T 21-04-2016 VFU_RS03705 4fbdf342862a2ed4c6deb04077c305a1 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VFU_RS02360 341941f8005191edf4793dd92b054955 224 Gene3D G3DSA:3.40.50.300 1 202 1.1E-65 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS02360 341941f8005191edf4793dd92b054955 224 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 2.3E-90 T 21-04-2016 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 VFU_RS02360 341941f8005191edf4793dd92b054955 224 SUPERFAMILY SSF52540 1 220 1.02E-63 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS02360 341941f8005191edf4793dd92b054955 224 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS02360 341941f8005191edf4793dd92b054955 224 PANTHER PTHR24220:SF470 3 221 1.1E-116 T 21-04-2016 VFU_RS02360 341941f8005191edf4793dd92b054955 224 SMART SM00382 27 215 7.8E-9 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS02360 341941f8005191edf4793dd92b054955 224 PANTHER PTHR24220 3 221 1.1E-116 T 21-04-2016 VFU_RS02360 341941f8005191edf4793dd92b054955 224 Pfam PF00005 ABC transporter 18 165 3.0E-36 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS10470 01156288ee5f1eae584a4ce0539c08d8 185 PIRSF PIRSF000847 1 185 3.1E-45 T 21-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 VFU_RS10470 01156288ee5f1eae584a4ce0539c08d8 185 PANTHER PTHR14269:SF13 2 179 4.6E-92 T 21-04-2016 VFU_RS10470 01156288ee5f1eae584a4ce0539c08d8 185 PANTHER PTHR14269 2 179 4.6E-92 T 21-04-2016 VFU_RS10470 01156288ee5f1eae584a4ce0539c08d8 185 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3 180 3.2E-54 T 21-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 VFU_RS10470 01156288ee5f1eae584a4ce0539c08d8 185 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 2.3E-18 T 21-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VFU_RS10470 01156288ee5f1eae584a4ce0539c08d8 185 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 21-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VFU_RS10220 5b686fe66e554a91edb1d60bc360a3b5 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 9.5E-13 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VFU_RS10220 5b686fe66e554a91edb1d60bc360a3b5 339 PANTHER PTHR30146 4 319 9.7E-57 T 21-04-2016 VFU_RS10220 5b686fe66e554a91edb1d60bc360a3b5 339 Pfam PF13377 Periplasmic binding protein-like domain 186 335 7.5E-25 T 21-04-2016 VFU_RS10220 5b686fe66e554a91edb1d60bc360a3b5 339 SMART SM00354 4 71 4.6E-7 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VFU_RS10220 5b686fe66e554a91edb1d60bc360a3b5 339 Gene3D G3DSA:3.40.50.2300 88 186 4.0E-11 T 21-04-2016 VFU_RS10220 5b686fe66e554a91edb1d60bc360a3b5 339 PANTHER PTHR30146:SF28 4 319 9.7E-57 T 21-04-2016 VFU_RS10220 5b686fe66e554a91edb1d60bc360a3b5 339 SUPERFAMILY SSF53822 79 335 1.84E-48 T 21-04-2016 IPR028082 Periplasmic binding protein-like I VFU_RS10220 5b686fe66e554a91edb1d60bc360a3b5 339 Gene3D G3DSA:1.10.260.40 5 51 3.0E-15 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VFU_RS10220 5b686fe66e554a91edb1d60bc360a3b5 339 SUPERFAMILY SSF47413 6 52 5.25E-10 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VFU_RS10220 5b686fe66e554a91edb1d60bc360a3b5 339 Gene3D G3DSA:3.40.50.2300 187 318 4.1E-34 T 21-04-2016 VFU_RS13630 934a692f0eaaf873d517a1612c130a34 232 Gene3D G3DSA:1.20.58.220 6 113 2.3E-37 T 21-04-2016 VFU_RS13630 934a692f0eaaf873d517a1612c130a34 232 PANTHER PTHR10010:SF14 1 225 4.5E-90 T 21-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 VFU_RS13630 934a692f0eaaf873d517a1612c130a34 232 SUPERFAMILY SSF109755 10 226 4.29E-70 T 21-04-2016 VFU_RS13630 934a692f0eaaf873d517a1612c130a34 232 Pfam PF01895 PhoU domain 128 210 1.4E-16 T 21-04-2016 IPR026022 PhoU domain VFU_RS13630 934a692f0eaaf873d517a1612c130a34 232 Pfam PF01895 PhoU domain 23 108 6.8E-22 T 21-04-2016 IPR026022 PhoU domain VFU_RS13630 934a692f0eaaf873d517a1612c130a34 232 Gene3D G3DSA:1.20.58.220 123 223 3.8E-30 T 21-04-2016 VFU_RS13630 934a692f0eaaf873d517a1612c130a34 232 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 10 219 9.2E-76 T 21-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 VFU_RS13630 934a692f0eaaf873d517a1612c130a34 232 PIRSF PIRSF003107 4 223 4.4E-70 T 21-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 VFU_RS13630 934a692f0eaaf873d517a1612c130a34 232 PANTHER PTHR10010 1 225 4.5E-90 T 21-04-2016 VFU_RS11440 7b828388420c63cae01ea060eca4e754 460 Gene3D G3DSA:1.20.120.640 306 392 4.7E-27 T 21-04-2016 VFU_RS11440 7b828388420c63cae01ea060eca4e754 460 PANTHER PTHR10890 1 459 1.5E-256 T 21-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VFU_RS11440 7b828388420c63cae01ea060eca4e754 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 3.6E-29 T 21-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VFU_RS11440 7b828388420c63cae01ea060eca4e754 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 3.6E-29 T 21-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VFU_RS11440 7b828388420c63cae01ea060eca4e754 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 3.6E-29 T 21-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VFU_RS11440 7b828388420c63cae01ea060eca4e754 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 3.6E-29 T 21-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VFU_RS11440 7b828388420c63cae01ea060eca4e754 460 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 459 5.5E-195 T 21-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 VFU_RS11440 7b828388420c63cae01ea060eca4e754 460 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 460 39.4 T 21-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 VFU_RS11440 7b828388420c63cae01ea060eca4e754 460 SMART SM00840 341 402 6.0E-28 T 21-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 VFU_RS11440 7b828388420c63cae01ea060eca4e754 460 SUPERFAMILY SSF47323 316 459 8.89E-40 T 21-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VFU_RS11440 7b828388420c63cae01ea060eca4e754 460 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 5.8E-144 T 21-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 VFU_RS11440 7b828388420c63cae01ea060eca4e754 460 Pfam PF09190 DALR domain 341 402 4.1E-25 T 21-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 VFU_RS11440 7b828388420c63cae01ea060eca4e754 460 SUPERFAMILY SSF52374 1 313 7.93E-106 T 21-04-2016 VFU_RS11440 7b828388420c63cae01ea060eca4e754 460 Gene3D G3DSA:3.40.50.620 20 305 3.1E-115 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VFU_RS04470 57f429947045a60666c14143c0af05bd 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 328 3.2E-22 T 21-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VFU_RS04470 57f429947045a60666c14143c0af05bd 331 SUPERFAMILY SSF52540 10 262 4.06E-61 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS04470 57f429947045a60666c14143c0af05bd 331 Gene3D G3DSA:3.40.50.300 9 265 1.4E-67 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS04470 57f429947045a60666c14143c0af05bd 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 308 3.4E-16 T 21-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VFU_RS04470 57f429947045a60666c14143c0af05bd 331 SMART SM00382 43 241 4.0E-11 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS04470 57f429947045a60666c14143c0af05bd 331 PANTHER PTHR24220 11 329 3.3E-115 T 21-04-2016 VFU_RS04470 57f429947045a60666c14143c0af05bd 331 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS04470 57f429947045a60666c14143c0af05bd 331 Pfam PF00005 ABC transporter 35 192 3.1E-32 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS04470 57f429947045a60666c14143c0af05bd 331 PANTHER PTHR24220:SF81 11 329 3.3E-115 T 21-04-2016 VFU_RS09675 5c90b5697ec05a1f62ea3a940c7d6e46 195 Gene3D G3DSA:3.40.50.360 1 194 7.5E-62 T 21-04-2016 IPR029039 Flavoprotein-like domain VFU_RS09675 5c90b5697ec05a1f62ea3a940c7d6e46 195 SUPERFAMILY SSF52218 1 193 8.38E-52 T 21-04-2016 IPR029039 Flavoprotein-like domain VFU_RS09675 5c90b5697ec05a1f62ea3a940c7d6e46 195 PANTHER PTHR10204:SF16 1 194 6.6E-87 T 21-04-2016 VFU_RS09675 5c90b5697ec05a1f62ea3a940c7d6e46 195 PANTHER PTHR10204 1 194 6.6E-87 T 21-04-2016 VFU_RS09675 5c90b5697ec05a1f62ea3a940c7d6e46 195 Pfam PF02525 Flavodoxin-like fold 3 192 3.1E-44 T 21-04-2016 IPR003680 Flavodoxin-like fold VFU_RS09675 5c90b5697ec05a1f62ea3a940c7d6e46 195 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 194 31.442 T 21-04-2016 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 VFU_RS14750 47d4ae6f641436197bbcfb3def154da6 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 7.7E-6 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS14750 47d4ae6f641436197bbcfb3def154da6 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 7.7E-6 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS14750 47d4ae6f641436197bbcfb3def154da6 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 7.7E-6 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS14750 47d4ae6f641436197bbcfb3def154da6 298 Gene3D G3DSA:3.40.190.10 93 190 5.1E-38 T 21-04-2016 VFU_RS14750 47d4ae6f641436197bbcfb3def154da6 298 Pfam PF03466 LysR substrate binding domain 95 263 2.7E-16 T 21-04-2016 IPR005119 LysR, substrate-binding VFU_RS14750 47d4ae6f641436197bbcfb3def154da6 298 SUPERFAMILY SSF46785 4 112 3.63E-17 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS14750 47d4ae6f641436197bbcfb3def154da6 298 Gene3D G3DSA:3.40.190.10 191 256 2.1E-4 T 21-04-2016 VFU_RS14750 47d4ae6f641436197bbcfb3def154da6 298 PANTHER PTHR30579 1 296 1.3E-116 T 21-04-2016 VFU_RS14750 47d4ae6f641436197bbcfb3def154da6 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 3.0E-16 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS14750 47d4ae6f641436197bbcfb3def154da6 298 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 4 295 1.3E-104 T 21-04-2016 IPR017685 HTH-type transcriptional regulator ArgP VFU_RS14750 47d4ae6f641436197bbcfb3def154da6 298 SUPERFAMILY SSF53850 94 293 8.87E-21 T 21-04-2016 VFU_RS14750 47d4ae6f641436197bbcfb3def154da6 298 Gene3D G3DSA:1.10.10.10 4 84 2.0E-18 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS14750 47d4ae6f641436197bbcfb3def154da6 298 PANTHER PTHR30579:SF2 1 296 1.3E-116 T 21-04-2016 VFU_RS02025 65645ec9531456ca7d381e619b04cd9a 175 SUPERFAMILY SSF47240 1 159 6.3E-58 T 21-04-2016 IPR009078 Ferritin-like superfamily VFU_RS02025 65645ec9531456ca7d381e619b04cd9a 175 Gene3D G3DSA:1.20.1260.10 1 161 2.0E-62 T 21-04-2016 IPR012347 Ferritin-related VFU_RS02025 65645ec9531456ca7d381e619b04cd9a 175 Pfam PF00210 Ferritin-like domain 8 143 5.6E-39 T 21-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 VFU_RS02025 65645ec9531456ca7d381e619b04cd9a 175 PANTHER PTHR11431 10 158 2.2E-46 T 21-04-2016 IPR001519 Ferritin GO:0006826|GO:0006879|GO:0008199 VFU_RS04105 dda9f9aff7d9eaddd4069212a4253e01 225 Pfam PF14622 Ribonuclease-III-like 18 140 6.0E-34 T 21-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 VFU_RS04105 dda9f9aff7d9eaddd4069212a4253e01 225 SUPERFAMILY SSF69065 5 158 3.31E-50 T 21-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 VFU_RS04105 dda9f9aff7d9eaddd4069212a4253e01 225 Gene3D G3DSA:1.10.1520.10 5 144 1.8E-48 T 21-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 VFU_RS04105 dda9f9aff7d9eaddd4069212a4253e01 225 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 8 222 2.6E-74 T 21-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 VFU_RS04105 dda9f9aff7d9eaddd4069212a4253e01 225 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 219 29.752 T 21-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 VFU_RS04105 dda9f9aff7d9eaddd4069212a4253e01 225 SMART SM00358 155 223 4.2E-21 T 21-04-2016 IPR014720 Double-stranded RNA-binding domain VFU_RS04105 dda9f9aff7d9eaddd4069212a4253e01 225 Pfam PF00035 Double-stranded RNA binding motif 155 222 3.3E-14 T 21-04-2016 IPR014720 Double-stranded RNA-binding domain VFU_RS04105 dda9f9aff7d9eaddd4069212a4253e01 225 SMART SM00535 20 148 4.4E-55 T 21-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 VFU_RS04105 dda9f9aff7d9eaddd4069212a4253e01 225 PANTHER PTHR11207 1 222 8.7E-100 T 21-04-2016 VFU_RS04105 dda9f9aff7d9eaddd4069212a4253e01 225 Gene3D G3DSA:3.30.160.20 152 223 5.7E-27 T 21-04-2016 IPR014720 Double-stranded RNA-binding domain VFU_RS04105 dda9f9aff7d9eaddd4069212a4253e01 225 SUPERFAMILY SSF54768 108 222 4.56E-28 T 21-04-2016 VFU_RS04105 dda9f9aff7d9eaddd4069212a4253e01 225 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 21-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 VFU_RS08400 0949716367548e64b025d7ee7ac84840 458 PIRSF PIRSF006603 6 458 2.3E-66 T 21-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VFU_RS08400 0949716367548e64b025d7ee7ac84840 458 TIGRFAM TIGR00797 matE: MATE efflux family protein 25 421 2.3E-58 T 21-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VFU_RS08400 0949716367548e64b025d7ee7ac84840 458 PANTHER PTHR11206:SF146 12 458 4.4E-238 T 21-04-2016 VFU_RS08400 0949716367548e64b025d7ee7ac84840 458 Pfam PF01554 MatE 25 185 2.8E-25 T 21-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VFU_RS08400 0949716367548e64b025d7ee7ac84840 458 Pfam PF01554 MatE 253 413 5.9E-18 T 21-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VFU_RS08400 0949716367548e64b025d7ee7ac84840 458 PANTHER PTHR11206 12 458 4.4E-238 T 21-04-2016 VFU_RS08515 3f6171012ca19b402e03dd301972bb96 760 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 21-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VFU_RS08515 3f6171012ca19b402e03dd301972bb96 760 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 731 7.8E-122 T 21-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VFU_RS08515 3f6171012ca19b402e03dd301972bb96 760 SUPERFAMILY SSF51998 222 738 5.8E-167 T 21-04-2016 VFU_RS08515 3f6171012ca19b402e03dd301972bb96 760 Gene3D G3DSA:3.20.70.20 398 559 1.1E-42 T 21-04-2016 VFU_RS08515 3f6171012ca19b402e03dd301972bb96 760 Gene3D G3DSA:3.20.70.20 143 344 1.1E-42 T 21-04-2016 VFU_RS08515 3f6171012ca19b402e03dd301972bb96 760 Gene3D G3DSA:3.20.70.20 610 702 1.1E-42 T 21-04-2016 VFU_RS08515 3f6171012ca19b402e03dd301972bb96 760 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 1.1E-175 T 21-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 VFU_RS08515 3f6171012ca19b402e03dd301972bb96 760 Pfam PF03477 ATP cone domain 6 92 6.7E-19 T 21-04-2016 IPR005144 ATP-cone domain VFU_RS08515 3f6171012ca19b402e03dd301972bb96 760 SUPERFAMILY SSF48168 10 221 2.75E-74 T 21-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 VFU_RS08515 3f6171012ca19b402e03dd301972bb96 760 PANTHER PTHR11573 6 752 0.0 T 21-04-2016 VFU_RS08515 3f6171012ca19b402e03dd301972bb96 760 PANTHER PTHR11573:SF17 6 752 0.0 T 21-04-2016 VFU_RS08515 3f6171012ca19b402e03dd301972bb96 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 3.4E-37 T 21-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VFU_RS08515 3f6171012ca19b402e03dd301972bb96 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 3.4E-37 T 21-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VFU_RS08515 3f6171012ca19b402e03dd301972bb96 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 3.4E-37 T 21-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VFU_RS08515 3f6171012ca19b402e03dd301972bb96 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 3.4E-37 T 21-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VFU_RS08515 3f6171012ca19b402e03dd301972bb96 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 3.4E-37 T 21-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VFU_RS08515 3f6171012ca19b402e03dd301972bb96 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 3.4E-37 T 21-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VFU_RS08515 3f6171012ca19b402e03dd301972bb96 760 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 142 219 3.5E-11 T 21-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 VFU_RS03740 c72f6a926c7c545e91b8ada184501d00 149 Gene3D G3DSA:3.40.50.10110 1 146 2.5E-42 T 21-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 VFU_RS03740 c72f6a926c7c545e91b8ada184501d00 149 SUPERFAMILY SSF102400 1 145 1.31E-39 T 21-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 VFU_RS03740 c72f6a926c7c545e91b8ada184501d00 149 PANTHER PTHR38767 2 149 4.4E-54 T 21-04-2016 VFU_RS03740 c72f6a926c7c545e91b8ada184501d00 149 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 142 4.7E-31 T 21-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 VFU_RS02430 ae3c4cd78635e083244c495bf387557d 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 61 1.4E-9 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VFU_RS02430 ae3c4cd78635e083244c495bf387557d 213 SUPERFAMILY SSF46689 7 80 3.78E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS02430 ae3c4cd78635e083244c495bf387557d 213 PANTHER PTHR30055 1 206 4.9E-102 T 21-04-2016 VFU_RS02430 ae3c4cd78635e083244c495bf387557d 213 PANTHER PTHR30055:SF39 1 206 4.9E-102 T 21-04-2016 VFU_RS02430 ae3c4cd78635e083244c495bf387557d 213 ProSitePatterns PS01081 TetR-type HTH domain signature. 31 61 - T 21-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VFU_RS02430 ae3c4cd78635e083244c495bf387557d 213 Gene3D G3DSA:1.10.357.10 7 195 7.4E-36 T 21-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 VFU_RS11370 32aae49920c37030a88fe403bba04347 260 SMART SM00028 216 249 4.8 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VFU_RS11370 32aae49920c37030a88fe403bba04347 260 SMART SM00028 180 213 25.0 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VFU_RS11370 32aae49920c37030a88fe403bba04347 260 SUPERFAMILY SSF48452 145 256 1.71E-12 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VFU_RS11370 32aae49920c37030a88fe403bba04347 260 Pfam PF13174 Tetratricopeptide repeat 217 249 2.5E-7 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VFU_RS11370 32aae49920c37030a88fe403bba04347 260 Pfam PF16331 TolA binding protein trimerisation 47 119 4.8E-25 T 21-04-2016 IPR032519 YbgF, trimerisation domain GO:0070206 VFU_RS11370 32aae49920c37030a88fe403bba04347 260 Gene3D G3DSA:1.25.40.10 116 252 5.9E-14 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VFU_RS11370 32aae49920c37030a88fe403bba04347 260 PANTHER PTHR26312:SF74 154 260 3.5E-16 T 21-04-2016 VFU_RS11370 32aae49920c37030a88fe403bba04347 260 PANTHER PTHR26312 154 260 3.5E-16 T 21-04-2016 VFU_RS11370 32aae49920c37030a88fe403bba04347 260 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 143 259 3.5E-36 T 21-04-2016 IPR014162 Tol-Pal system, YbgF VFU_RS11370 32aae49920c37030a88fe403bba04347 260 Pfam PF13432 Tetratricopeptide repeat 154 207 2.4E-7 T 21-04-2016 VFU_RS07380 8bb7918af5aaf0b93f56f8535879055b 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 5.8E-8 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VFU_RS07380 8bb7918af5aaf0b93f56f8535879055b 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 5.8E-8 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VFU_RS07380 8bb7918af5aaf0b93f56f8535879055b 199 PANTHER PTHR30055 1 197 4.5E-71 T 21-04-2016 VFU_RS07380 8bb7918af5aaf0b93f56f8535879055b 199 Gene3D G3DSA:1.10.10.60 1 53 3.4E-21 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS07380 8bb7918af5aaf0b93f56f8535879055b 199 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 143 197 1.1E-8 T 21-04-2016 VFU_RS07380 8bb7918af5aaf0b93f56f8535879055b 199 Gene3D G3DSA:1.10.357.10 54 199 9.4E-31 T 21-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 VFU_RS07380 8bb7918af5aaf0b93f56f8535879055b 199 PANTHER PTHR30055:SF76 1 197 4.5E-71 T 21-04-2016 VFU_RS07380 8bb7918af5aaf0b93f56f8535879055b 199 SUPERFAMILY SSF46689 1 69 3.15E-18 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS07380 8bb7918af5aaf0b93f56f8535879055b 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 8.1E-16 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VFU_RS11375 2fd1d17c8c45e60a43dd0d79a6b03958 179 SUPERFAMILY SSF103088 70 179 1.57E-33 T 21-04-2016 IPR006665 OmpA-like domain VFU_RS11375 2fd1d17c8c45e60a43dd0d79a6b03958 179 Gene3D G3DSA:3.30.1330.60 67 178 3.6E-34 T 21-04-2016 IPR006665 OmpA-like domain VFU_RS11375 2fd1d17c8c45e60a43dd0d79a6b03958 179 Pfam PF00691 OmpA family 78 173 4.8E-21 T 21-04-2016 IPR006665 OmpA-like domain VFU_RS11375 2fd1d17c8c45e60a43dd0d79a6b03958 179 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 76 179 1.3E-44 T 21-04-2016 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 VFU_RS11375 2fd1d17c8c45e60a43dd0d79a6b03958 179 ProSitePatterns PS01068 OmpA-like domain. 111 155 - T 21-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 VFU_RS11375 2fd1d17c8c45e60a43dd0d79a6b03958 179 PANTHER PTHR30128:SF18 34 179 6.4E-56 T 21-04-2016 VFU_RS11375 2fd1d17c8c45e60a43dd0d79a6b03958 179 PRINTS PR01021 OMPA domain signature 109 124 6.0E-16 T 21-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VFU_RS11375 2fd1d17c8c45e60a43dd0d79a6b03958 179 PRINTS PR01021 OMPA domain signature 79 101 6.0E-16 T 21-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VFU_RS11375 2fd1d17c8c45e60a43dd0d79a6b03958 179 PRINTS PR01021 OMPA domain signature 124 140 6.0E-16 T 21-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VFU_RS11375 2fd1d17c8c45e60a43dd0d79a6b03958 179 PANTHER PTHR30128 34 179 6.4E-56 T 21-04-2016 VFU_RS02460 267a23625dad0996c769323eeec8a691 153 Gene3D G3DSA:3.30.70.330 49 145 1.8E-26 T 21-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 VFU_RS02460 267a23625dad0996c769323eeec8a691 153 PANTHER PTHR24012 65 143 6.3E-20 T 21-04-2016 VFU_RS02460 267a23625dad0996c769323eeec8a691 153 SMART SM00360 65 137 1.5E-19 T 21-04-2016 IPR000504 RNA recognition motif domain GO:0003676 VFU_RS02460 267a23625dad0996c769323eeec8a691 153 SUPERFAMILY SSF54928 48 144 5.37E-26 T 21-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 VFU_RS02460 267a23625dad0996c769323eeec8a691 153 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 66 135 1.4E-16 T 21-04-2016 IPR000504 RNA recognition motif domain GO:0003676 VFU_RS02600 aee5f0c68a6e8f3a2f0664e8b82bcb79 118 Pfam PF13633 Prokaryotic N-terminal methylation site 5 31 1.3E-9 T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site VFU_RS02600 aee5f0c68a6e8f3a2f0664e8b82bcb79 118 PANTHER PTHR38779:SF2 1 117 2.9E-41 T 21-04-2016 VFU_RS02600 aee5f0c68a6e8f3a2f0664e8b82bcb79 118 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 24 8.1E-8 T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site VFU_RS02600 aee5f0c68a6e8f3a2f0664e8b82bcb79 118 Gene3D G3DSA:3.30.1300.30 33 118 4.4E-28 T 21-04-2016 VFU_RS02600 aee5f0c68a6e8f3a2f0664e8b82bcb79 118 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site VFU_RS02600 aee5f0c68a6e8f3a2f0664e8b82bcb79 118 Pfam PF02501 Type II secretion system (T2SS), protein I 41 116 6.3E-21 T 21-04-2016 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 VFU_RS02600 aee5f0c68a6e8f3a2f0664e8b82bcb79 118 SUPERFAMILY SSF54523 38 116 2.83E-22 T 21-04-2016 VFU_RS02600 aee5f0c68a6e8f3a2f0664e8b82bcb79 118 TIGRFAM TIGR01707 gspI: type II secretion system protein I 7 104 4.2E-37 T 21-04-2016 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 VFU_RS02600 aee5f0c68a6e8f3a2f0664e8b82bcb79 118 PANTHER PTHR38779 1 117 2.9E-41 T 21-04-2016 VFU_RS00220 2a17ffae7030cd12b9eb8aa558b64fe5 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1265 1339 3.7E-27 T 21-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VFU_RS00220 2a17ffae7030cd12b9eb8aa558b64fe5 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1263 1.4E-156 T 21-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VFU_RS00220 2a17ffae7030cd12b9eb8aa558b64fe5 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 1.6E-23 T 21-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VFU_RS00220 2a17ffae7030cd12b9eb8aa558b64fe5 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 1.1E-28 T 21-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VFU_RS00220 2a17ffae7030cd12b9eb8aa558b64fe5 1342 Gene3D G3DSA:3.90.1100.10 659 713 1.1E-145 T 21-04-2016 VFU_RS00220 2a17ffae7030cd12b9eb8aa558b64fe5 1342 Gene3D G3DSA:3.90.1100.10 445 591 1.1E-145 T 21-04-2016 VFU_RS00220 2a17ffae7030cd12b9eb8aa558b64fe5 1342 Gene3D G3DSA:3.90.1100.10 20 151 1.1E-145 T 21-04-2016 VFU_RS00220 2a17ffae7030cd12b9eb8aa558b64fe5 1342 Gene3D G3DSA:2.40.50.100 715 792 8.0E-30 T 21-04-2016 VFU_RS00220 2a17ffae7030cd12b9eb8aa558b64fe5 1342 Gene3D G3DSA:2.40.270.10 793 820 2.4E-85 T 21-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VFU_RS00220 2a17ffae7030cd12b9eb8aa558b64fe5 1342 Gene3D G3DSA:2.40.270.10 1060 1241 2.4E-85 T 21-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VFU_RS00220 2a17ffae7030cd12b9eb8aa558b64fe5 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 233 5.9E-8 T 21-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VFU_RS00220 2a17ffae7030cd12b9eb8aa558b64fe5 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 337 454 2.5E-16 T 21-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VFU_RS00220 2a17ffae7030cd12b9eb8aa558b64fe5 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1338 0.0 T 21-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VFU_RS00220 2a17ffae7030cd12b9eb8aa558b64fe5 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 8.4E-58 T 21-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VFU_RS00220 2a17ffae7030cd12b9eb8aa558b64fe5 1342 Gene3D G3DSA:2.30.150.10 592 656 8.5E-28 T 21-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VFU_RS00220 2a17ffae7030cd12b9eb8aa558b64fe5 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1341 12.269 T 21-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VFU_RS00220 2a17ffae7030cd12b9eb8aa558b64fe5 1342 Gene3D G3DSA:2.40.50.150 1045 1059 1.1E-57 T 21-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VFU_RS00220 2a17ffae7030cd12b9eb8aa558b64fe5 1342 Gene3D G3DSA:2.40.50.150 828 937 1.1E-57 T 21-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VFU_RS00220 2a17ffae7030cd12b9eb8aa558b64fe5 1342 Gene3D G3DSA:3.90.1110.10 346 444 3.0E-65 T 21-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VFU_RS00220 2a17ffae7030cd12b9eb8aa558b64fe5 1342 Gene3D G3DSA:3.90.1110.10 153 230 3.0E-65 T 21-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VFU_RS00220 2a17ffae7030cd12b9eb8aa558b64fe5 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 21-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VFU_RS00220 2a17ffae7030cd12b9eb8aa558b64fe5 1342 PANTHER PTHR20856:SF20 1181 1342 0.0 T 21-04-2016 VFU_RS00220 2a17ffae7030cd12b9eb8aa558b64fe5 1342 PANTHER PTHR20856:SF20 5 231 0.0 T 21-04-2016 VFU_RS00220 2a17ffae7030cd12b9eb8aa558b64fe5 1342 PANTHER PTHR20856:SF20 1034 1128 0.0 T 21-04-2016 VFU_RS00220 2a17ffae7030cd12b9eb8aa558b64fe5 1342 PANTHER PTHR20856:SF20 340 725 0.0 T 21-04-2016 VFU_RS00220 2a17ffae7030cd12b9eb8aa558b64fe5 1342 PANTHER PTHR20856:SF20 743 930 0.0 T 21-04-2016 VFU_RS00220 2a17ffae7030cd12b9eb8aa558b64fe5 1342 SUPERFAMILY SSF64484 343 939 0.0 T 21-04-2016 VFU_RS00220 2a17ffae7030cd12b9eb8aa558b64fe5 1342 SUPERFAMILY SSF64484 11 226 0.0 T 21-04-2016 VFU_RS00220 2a17ffae7030cd12b9eb8aa558b64fe5 1342 SUPERFAMILY SSF64484 1039 1341 0.0 T 21-04-2016 VFU_RS00220 2a17ffae7030cd12b9eb8aa558b64fe5 1342 PANTHER PTHR20856 1181 1342 0.0 T 21-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VFU_RS00220 2a17ffae7030cd12b9eb8aa558b64fe5 1342 PANTHER PTHR20856 5 231 0.0 T 21-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VFU_RS00220 2a17ffae7030cd12b9eb8aa558b64fe5 1342 PANTHER PTHR20856 1034 1128 0.0 T 21-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VFU_RS00220 2a17ffae7030cd12b9eb8aa558b64fe5 1342 PANTHER PTHR20856 340 725 0.0 T 21-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VFU_RS00220 2a17ffae7030cd12b9eb8aa558b64fe5 1342 PANTHER PTHR20856 743 930 0.0 T 21-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VFU_RS00475 91930329d2b44ea91e37a973708b4bdb 430 Gene3D G3DSA:3.30.470.20 191 328 1.7E-65 T 21-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VFU_RS00475 91930329d2b44ea91e37a973708b4bdb 430 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 4.6E-186 T 21-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VFU_RS00475 91930329d2b44ea91e37a973708b4bdb 430 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 21-04-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VFU_RS00475 91930329d2b44ea91e37a973708b4bdb 430 SUPERFAMILY SSF51246 329 424 1.78E-33 T 21-04-2016 IPR011054 Rudiment single hybrid motif VFU_RS00475 91930329d2b44ea91e37a973708b4bdb 430 Gene3D G3DSA:3.90.600.10 330 423 1.0E-35 T 21-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VFU_RS00475 91930329d2b44ea91e37a973708b4bdb 430 Gene3D G3DSA:3.30.1490.20 121 190 1.9E-33 T 21-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VFU_RS00475 91930329d2b44ea91e37a973708b4bdb 430 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 5.0E-35 T 21-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VFU_RS00475 91930329d2b44ea91e37a973708b4bdb 430 SMART SM01209 103 296 1.7E-142 T 21-04-2016 VFU_RS00475 91930329d2b44ea91e37a973708b4bdb 430 SUPERFAMILY SSF52440 1 103 1.32E-36 T 21-04-2016 IPR016185 Pre-ATP-grasp domain VFU_RS00475 91930329d2b44ea91e37a973708b4bdb 430 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 421 2.0E-29 T 21-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VFU_RS00475 91930329d2b44ea91e37a973708b4bdb 430 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 2.8E-82 T 21-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VFU_RS00475 91930329d2b44ea91e37a973708b4bdb 430 Gene3D G3DSA:3.40.50.20 2 95 1.7E-37 T 21-04-2016 IPR016185 Pre-ATP-grasp domain VFU_RS00475 91930329d2b44ea91e37a973708b4bdb 430 SMART SM01210 330 423 1.3E-55 T 21-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VFU_RS00475 91930329d2b44ea91e37a973708b4bdb 430 PANTHER PTHR10520 1 426 2.3E-293 T 21-04-2016 VFU_RS00475 91930329d2b44ea91e37a973708b4bdb 430 SUPERFAMILY SSF56059 104 323 1.29E-68 T 21-04-2016 VFU_RS00475 91930329d2b44ea91e37a973708b4bdb 430 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 44.243 T 21-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VFU_RS08365 2eebbac7f98dfc258911fb0dde6b2e13 219 Gene3D G3DSA:3.40.50.2300 1 120 9.4E-34 T 21-04-2016 VFU_RS08365 2eebbac7f98dfc258911fb0dde6b2e13 219 Pfam PF00072 Response regulator receiver domain 3 113 6.5E-24 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS08365 2eebbac7f98dfc258911fb0dde6b2e13 219 SMART SM00862 145 216 7.1E-23 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VFU_RS08365 2eebbac7f98dfc258911fb0dde6b2e13 219 Gene3D G3DSA:1.10.10.10 122 218 8.9E-29 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS08365 2eebbac7f98dfc258911fb0dde6b2e13 219 PANTHER PTHR26402 1 219 5.3E-97 T 21-04-2016 VFU_RS08365 2eebbac7f98dfc258911fb0dde6b2e13 219 SUPERFAMILY SSF46894 119 217 9.92E-27 T 21-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VFU_RS08365 2eebbac7f98dfc258911fb0dde6b2e13 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 4.1E-22 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VFU_RS08365 2eebbac7f98dfc258911fb0dde6b2e13 219 SMART SM00448 1 112 2.3E-34 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS08365 2eebbac7f98dfc258911fb0dde6b2e13 219 SUPERFAMILY SSF52172 1 118 1.85E-36 T 21-04-2016 IPR011006 CheY-like superfamily VFU_RS08365 2eebbac7f98dfc258911fb0dde6b2e13 219 PANTHER PTHR26402:SF316 1 219 5.3E-97 T 21-04-2016 VFU_RS13615 a5b8541459ff127c6951d357685216f4 203 SUPERFAMILY SSF52833 1 195 2.43E-66 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS13615 a5b8541459ff127c6951d357685216f4 203 Gene3D G3DSA:3.40.30.10 3 194 8.2E-70 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS13615 a5b8541459ff127c6951d357685216f4 203 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 194 7.2E-8 T 21-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 VFU_RS13615 a5b8541459ff127c6951d357685216f4 203 PANTHER PTHR10681 1 196 2.4E-84 T 21-04-2016 VFU_RS13615 a5b8541459ff127c6951d357685216f4 203 PIRSF PIRSF000239 1 202 1.3E-58 T 21-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 VFU_RS13615 a5b8541459ff127c6951d357685216f4 203 Pfam PF00578 AhpC/TSA family 4 139 2.5E-34 T 21-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 VFU_RS02235 06a58ac09ede5f30ce506455555a669b 276 Pfam PF01678 Diaminopimelate epimerase 154 269 6.2E-33 T 21-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 VFU_RS02235 06a58ac09ede5f30ce506455555a669b 276 Pfam PF01678 Diaminopimelate epimerase 5 124 2.0E-33 T 21-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 VFU_RS02235 06a58ac09ede5f30ce506455555a669b 276 SUPERFAMILY SSF54506 4 132 3.53E-49 T 21-04-2016 VFU_RS02235 06a58ac09ede5f30ce506455555a669b 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 21-04-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 VFU_RS02235 06a58ac09ede5f30ce506455555a669b 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 39.755 T 21-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 VFU_RS02235 06a58ac09ede5f30ce506455555a669b 276 Gene3D G3DSA:3.10.310.10 4 122 2.1E-49 T 21-04-2016 VFU_RS02235 06a58ac09ede5f30ce506455555a669b 276 Gene3D G3DSA:3.10.310.10 123 264 7.1E-52 T 21-04-2016 VFU_RS02235 06a58ac09ede5f30ce506455555a669b 276 PANTHER PTHR31689:SF0 1 275 3.4E-141 T 21-04-2016 VFU_RS02235 06a58ac09ede5f30ce506455555a669b 276 SUPERFAMILY SSF54506 138 274 5.69E-51 T 21-04-2016 VFU_RS02235 06a58ac09ede5f30ce506455555a669b 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 274 3.3E-102 T 21-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 VFU_RS02235 06a58ac09ede5f30ce506455555a669b 276 PANTHER PTHR31689 1 275 3.4E-141 T 21-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 VFU_RS03950 6bba04b1f2855a68ad40836c1abd79b0 261 PANTHER PTHR23054:SF21 42 240 2.3E-30 T 21-04-2016 VFU_RS03950 6bba04b1f2855a68ad40836c1abd79b0 261 Pfam PF04784 Protein of unknown function, DUF547 86 198 1.1E-26 T 21-04-2016 IPR006869 Domain of unknown function DUF547 VFU_RS03950 6bba04b1f2855a68ad40836c1abd79b0 261 PANTHER PTHR23054 42 240 2.3E-30 T 21-04-2016 VFU_RS01740 eeb91bbb7a9906a3ee8c8bec76207236 144 SUPERFAMILY SSF52218 2 144 9.64E-37 T 21-04-2016 IPR029039 Flavoprotein-like domain VFU_RS01740 eeb91bbb7a9906a3ee8c8bec76207236 144 PANTHER PTHR19384:SF81 2 144 7.4E-23 T 21-04-2016 VFU_RS01740 eeb91bbb7a9906a3ee8c8bec76207236 144 Gene3D G3DSA:3.40.50.360 2 142 6.0E-32 T 21-04-2016 IPR029039 Flavoprotein-like domain VFU_RS01740 eeb91bbb7a9906a3ee8c8bec76207236 144 Pfam PF00258 Flavodoxin 4 125 5.0E-19 T 21-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VFU_RS01740 eeb91bbb7a9906a3ee8c8bec76207236 144 PANTHER PTHR19384 2 144 7.4E-23 T 21-04-2016 VFU_RS14475 826ac7dedd901972d9d7bfb7f1360bc1 860 Pfam PF02272 DHHA1 domain 786 853 1.8E-15 T 21-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 VFU_RS14475 826ac7dedd901972d9d7bfb7f1360bc1 860 PANTHER PTHR11777:SF9 1 860 0.0 T 21-04-2016 VFU_RS14475 826ac7dedd901972d9d7bfb7f1360bc1 860 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 652 695 2.9E-19 T 21-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 VFU_RS14475 826ac7dedd901972d9d7bfb7f1360bc1 860 SMART SM00863 652 695 1.4E-22 T 21-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 VFU_RS14475 826ac7dedd901972d9d7bfb7f1360bc1 860 Gene3D G3DSA:3.30.930.10 3 251 1.1E-122 T 21-04-2016 VFU_RS14475 826ac7dedd901972d9d7bfb7f1360bc1 860 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 860 198.16 T 21-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 VFU_RS14475 826ac7dedd901972d9d7bfb7f1360bc1 860 SUPERFAMILY SSF50447 453 551 3.07E-19 T 21-04-2016 IPR009000 Translation protein, beta-barrel domain VFU_RS14475 826ac7dedd901972d9d7bfb7f1360bc1 860 PANTHER PTHR11777 1 860 0.0 T 21-04-2016 VFU_RS14475 826ac7dedd901972d9d7bfb7f1360bc1 860 SUPERFAMILY SSF55681 3 254 8.2E-109 T 21-04-2016 VFU_RS14475 826ac7dedd901972d9d7bfb7f1360bc1 860 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 839 0.0 T 21-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 VFU_RS14475 826ac7dedd901972d9d7bfb7f1360bc1 860 SUPERFAMILY SSF101353 255 461 6.54E-59 T 21-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 VFU_RS14475 826ac7dedd901972d9d7bfb7f1360bc1 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 235 248 4.8E-31 T 21-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 VFU_RS14475 826ac7dedd901972d9d7bfb7f1360bc1 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 4.8E-31 T 21-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 VFU_RS14475 826ac7dedd901972d9d7bfb7f1360bc1 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 281 297 4.8E-31 T 21-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 VFU_RS14475 826ac7dedd901972d9d7bfb7f1360bc1 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 208 219 4.8E-31 T 21-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 VFU_RS14475 826ac7dedd901972d9d7bfb7f1360bc1 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 305 318 4.8E-31 T 21-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 VFU_RS14475 826ac7dedd901972d9d7bfb7f1360bc1 860 Gene3D G3DSA:3.40.50.720 712 796 9.1E-4 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS14475 826ac7dedd901972d9d7bfb7f1360bc1 860 Pfam PF01411 tRNA synthetases class II (A) 7 555 1.3E-224 T 21-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 VFU_RS14475 826ac7dedd901972d9d7bfb7f1360bc1 860 SUPERFAMILY SSF55186 551 710 1.18E-53 T 21-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 VFU_RS02415 995b8462969be709a359e55be3eeb967 270 Gene3D G3DSA:3.40.50.150 19 207 1.6E-29 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS02415 995b8462969be709a359e55be3eeb967 270 Pfam PF04072 Leucine carboxyl methyltransferase 70 128 3.8E-6 T 21-04-2016 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- VFU_RS02415 995b8462969be709a359e55be3eeb967 270 PIRSF PIRSF028177 3 270 3.6E-75 T 21-04-2016 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP GO:0017000|GO:1901106 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.-|UniPathway: UPA00174 VFU_RS02415 995b8462969be709a359e55be3eeb967 270 PANTHER PTHR13600:SF19 18 190 7.4E-51 T 21-04-2016 VFU_RS02415 995b8462969be709a359e55be3eeb967 270 PANTHER PTHR13600 18 190 7.4E-51 T 21-04-2016 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- VFU_RS02415 995b8462969be709a359e55be3eeb967 270 SUPERFAMILY SSF53335 19 252 6.89E-34 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS08815 7bbb7c6705d73cec812b37d4c64fa699 1030 Gene3D G3DSA:3.20.20.80 334 626 2.5E-111 T 21-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VFU_RS08815 7bbb7c6705d73cec812b37d4c64fa699 1030 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 446 460 - T 21-04-2016 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VFU_RS08815 7bbb7c6705d73cec812b37d4c64fa699 1030 Gene3D G3DSA:2.60.40.320 630 730 2.8E-21 T 21-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 VFU_RS08815 7bbb7c6705d73cec812b37d4c64fa699 1030 SUPERFAMILY SSF74650 752 1028 2.35E-89 T 21-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 VFU_RS08815 7bbb7c6705d73cec812b37d4c64fa699 1030 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 334 629 1.1E-109 T 21-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VFU_RS08815 7bbb7c6705d73cec812b37d4c64fa699 1030 PANTHER PTHR10066 597 1027 0.0 T 21-04-2016 VFU_RS08815 7bbb7c6705d73cec812b37d4c64fa699 1030 PANTHER PTHR10066 1 579 0.0 T 21-04-2016 VFU_RS08815 7bbb7c6705d73cec812b37d4c64fa699 1030 SUPERFAMILY SSF51445 335 626 1.66E-98 T 21-04-2016 IPR017853 Glycoside hydrolase superfamily VFU_RS08815 7bbb7c6705d73cec812b37d4c64fa699 1030 Gene3D G3DSA:2.60.120.260 4 205 1.2E-80 T 21-04-2016 IPR008979 Galactose-binding domain-like VFU_RS08815 7bbb7c6705d73cec812b37d4c64fa699 1030 SUPERFAMILY SSF49785 11 216 3.26E-64 T 21-04-2016 IPR008979 Galactose-binding domain-like VFU_RS08815 7bbb7c6705d73cec812b37d4c64fa699 1030 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 50 216 2.7E-54 T 21-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VFU_RS08815 7bbb7c6705d73cec812b37d4c64fa699 1030 Pfam PF16353 Domain of unknown function(DUF4981) 642 729 1.0E-15 T 21-04-2016 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VFU_RS08815 7bbb7c6705d73cec812b37d4c64fa699 1030 Pfam PF00703 Glycosyl hydrolases family 2 218 332 1.3E-12 T 21-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 VFU_RS08815 7bbb7c6705d73cec812b37d4c64fa699 1030 PANTHER PTHR10066:SF72 597 1027 0.0 T 21-04-2016 VFU_RS08815 7bbb7c6705d73cec812b37d4c64fa699 1030 PANTHER PTHR10066:SF72 1 579 0.0 T 21-04-2016 VFU_RS08815 7bbb7c6705d73cec812b37d4c64fa699 1030 Gene3D G3DSA:2.70.98.10 747 1027 4.4E-91 T 21-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 VFU_RS08815 7bbb7c6705d73cec812b37d4c64fa699 1030 PRINTS PR00132 Glycosyl hydrolase family 2 signature 144 159 1.3E-38 T 21-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VFU_RS08815 7bbb7c6705d73cec812b37d4c64fa699 1030 PRINTS PR00132 Glycosyl hydrolase family 2 signature 446 461 1.3E-38 T 21-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VFU_RS08815 7bbb7c6705d73cec812b37d4c64fa699 1030 PRINTS PR00132 Glycosyl hydrolase family 2 signature 534 549 1.3E-38 T 21-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VFU_RS08815 7bbb7c6705d73cec812b37d4c64fa699 1030 PRINTS PR00132 Glycosyl hydrolase family 2 signature 374 392 1.3E-38 T 21-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VFU_RS08815 7bbb7c6705d73cec812b37d4c64fa699 1030 PRINTS PR00132 Glycosyl hydrolase family 2 signature 343 357 1.3E-38 T 21-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VFU_RS08815 7bbb7c6705d73cec812b37d4c64fa699 1030 Pfam PF02929 Beta galactosidase small chain 762 1027 9.4E-68 T 21-04-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VFU_RS08815 7bbb7c6705d73cec812b37d4c64fa699 1030 Gene3D G3DSA:2.60.40.320 206 332 2.2E-34 T 21-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 VFU_RS08815 7bbb7c6705d73cec812b37d4c64fa699 1030 SMART SM01038 755 1028 3.2E-106 T 21-04-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VFU_RS08815 7bbb7c6705d73cec812b37d4c64fa699 1030 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 384 409 - T 21-04-2016 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VFU_RS08815 7bbb7c6705d73cec812b37d4c64fa699 1030 SUPERFAMILY SSF49303 218 332 2.79E-22 T 21-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 VFU_RS08815 7bbb7c6705d73cec812b37d4c64fa699 1030 SUPERFAMILY SSF49303 624 730 4.8E-21 T 21-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 VFU_RS06980 5556c38dd9e6514878d78ce769bb606f 443 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 335 344 - T 21-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VFU_RS06980 5556c38dd9e6514878d78ce769bb606f 443 Gene3D G3DSA:3.40.50.2300 3 117 2.4E-10 T 21-04-2016 VFU_RS06980 5556c38dd9e6514878d78ce769bb606f 443 SMART SM00382 145 292 1.9E-10 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS06980 5556c38dd9e6514878d78ce769bb606f 443 Gene3D G3DSA:1.10.10.60 386 426 2.1E-10 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS06980 5556c38dd9e6514878d78ce769bb606f 443 PANTHER PTHR32071 1 443 1.2E-173 T 21-04-2016 VFU_RS06980 5556c38dd9e6514878d78ce769bb606f 443 Pfam PF02954 Bacterial regulatory protein, Fis family 390 426 3.6E-9 T 21-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VFU_RS06980 5556c38dd9e6514878d78ce769bb606f 443 Gene3D G3DSA:1.10.8.60 298 370 9.5E-22 T 21-04-2016 VFU_RS06980 5556c38dd9e6514878d78ce769bb606f 443 SUPERFAMILY SSF52172 1 169 2.99E-19 T 21-04-2016 IPR011006 CheY-like superfamily VFU_RS06980 5556c38dd9e6514878d78ce769bb606f 443 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 211 226 - T 21-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VFU_RS06980 5556c38dd9e6514878d78ce769bb606f 443 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 149 162 - T 21-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VFU_RS06980 5556c38dd9e6514878d78ce769bb606f 443 Gene3D G3DSA:3.40.50.300 123 297 3.6E-59 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS06980 5556c38dd9e6514878d78ce769bb606f 443 Pfam PF00158 Sigma-54 interaction domain 126 291 2.0E-70 T 21-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VFU_RS06980 5556c38dd9e6514878d78ce769bb606f 443 SMART SM00448 4 112 0.0049 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS06980 5556c38dd9e6514878d78ce769bb606f 443 SUPERFAMILY SSF52540 129 364 1.27E-71 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS06980 5556c38dd9e6514878d78ce769bb606f 443 SUPERFAMILY SSF46689 335 426 4.93E-10 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS06980 5556c38dd9e6514878d78ce769bb606f 443 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 411 431 5.8E-5 T 21-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VFU_RS06980 5556c38dd9e6514878d78ce769bb606f 443 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 394 411 5.8E-5 T 21-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VFU_RS06980 5556c38dd9e6514878d78ce769bb606f 443 PANTHER PTHR32071:SF21 1 443 1.2E-173 T 21-04-2016 IPR029995 Transcriptional regulatory protein FlbD GO:0003700|GO:0006355 VFU_RS06235 ea807f22b1a0c2280af7d282dbeb5495 244 SUPERFAMILY SSF88946 6 91 8.9E-22 T 21-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS06235 ea807f22b1a0c2280af7d282dbeb5495 244 Pfam PF04539 Sigma-70 region 3 100 171 1.9E-13 T 21-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS06235 ea807f22b1a0c2280af7d282dbeb5495 244 Gene3D G3DSA:1.10.10.10 91 138 1.1E-10 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS06235 ea807f22b1a0c2280af7d282dbeb5495 244 SUPERFAMILY SSF88659 92 164 6.98E-16 T 21-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS06235 ea807f22b1a0c2280af7d282dbeb5495 244 Pfam PF04545 Sigma-70, region 4 187 234 2.8E-19 T 21-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS06235 ea807f22b1a0c2280af7d282dbeb5495 244 Pfam PF04542 Sigma-70 region 2 20 91 9.3E-15 T 21-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS06235 ea807f22b1a0c2280af7d282dbeb5495 244 PRINTS PR00046 Major sigma-70 factor signature 46 59 2.7E-12 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS06235 ea807f22b1a0c2280af7d282dbeb5495 244 PRINTS PR00046 Major sigma-70 factor signature 222 233 2.7E-12 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS06235 ea807f22b1a0c2280af7d282dbeb5495 244 PRINTS PR00046 Major sigma-70 factor signature 190 202 2.7E-12 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS06235 ea807f22b1a0c2280af7d282dbeb5495 244 PRINTS PR00046 Major sigma-70 factor signature 207 222 2.7E-12 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS06235 ea807f22b1a0c2280af7d282dbeb5495 244 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 7 240 62.003 T 21-04-2016 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VFU_RS06235 ea807f22b1a0c2280af7d282dbeb5495 244 PANTHER PTHR30385:SF7 5 244 1.1E-77 T 21-04-2016 VFU_RS06235 ea807f22b1a0c2280af7d282dbeb5495 244 PANTHER PTHR30385 5 244 1.1E-77 T 21-04-2016 VFU_RS06235 ea807f22b1a0c2280af7d282dbeb5495 244 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 237 8.7E-31 T 21-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS06235 ea807f22b1a0c2280af7d282dbeb5495 244 SUPERFAMILY SSF88659 162 240 2.62E-21 T 21-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS06235 ea807f22b1a0c2280af7d282dbeb5495 244 PIRSF PIRSF000770 3 243 3.7E-35 T 21-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 VFU_RS06235 ea807f22b1a0c2280af7d282dbeb5495 244 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 20 238 1.1E-84 T 21-04-2016 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VFU_RS06235 ea807f22b1a0c2280af7d282dbeb5495 244 Gene3D G3DSA:1.10.601.10 22 86 1.2E-13 T 21-04-2016 VFU_RS06235 ea807f22b1a0c2280af7d282dbeb5495 244 Gene3D G3DSA:1.10.10.10 175 238 6.9E-15 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS10150 40ab677b139ef825b2e157927a286629 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 4.9E-20 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS10150 40ab677b139ef825b2e157927a286629 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.0E-9 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS10150 40ab677b139ef825b2e157927a286629 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.0E-9 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS10150 40ab677b139ef825b2e157927a286629 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.0E-9 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS10150 40ab677b139ef825b2e157927a286629 289 SUPERFAMILY SSF53850 89 288 1.63E-40 T 21-04-2016 VFU_RS10150 40ab677b139ef825b2e157927a286629 289 SUPERFAMILY SSF46785 1 110 1.4E-23 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS10150 40ab677b139ef825b2e157927a286629 289 Gene3D G3DSA:3.40.190.10 90 175 6.5E-19 T 21-04-2016 VFU_RS10150 40ab677b139ef825b2e157927a286629 289 Gene3D G3DSA:3.40.190.10 176 261 9.1E-18 T 21-04-2016 VFU_RS10150 40ab677b139ef825b2e157927a286629 289 PANTHER PTHR30419 1 289 3.7E-118 T 21-04-2016 VFU_RS10150 40ab677b139ef825b2e157927a286629 289 PANTHER PTHR30419:SF4 1 289 3.7E-118 T 21-04-2016 VFU_RS10150 40ab677b139ef825b2e157927a286629 289 Gene3D G3DSA:1.10.10.10 1 85 4.0E-29 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS10150 40ab677b139ef825b2e157927a286629 289 Pfam PF03466 LysR substrate binding domain 88 287 2.3E-45 T 21-04-2016 IPR005119 LysR, substrate-binding VFU_RS04375 b3b59f2368137381c056beb3ce2fcfe5 456 SUPERFAMILY SSF81891 181 416 2.49E-47 T 21-04-2016 VFU_RS04375 b3b59f2368137381c056beb3ce2fcfe5 456 PANTHER PTHR13734 19 317 3.9E-129 T 21-04-2016 VFU_RS04375 b3b59f2368137381c056beb3ce2fcfe5 456 SUPERFAMILY SSF81301 25 180 2.18E-40 T 21-04-2016 VFU_RS04375 b3b59f2368137381c056beb3ce2fcfe5 456 Pfam PF01743 Poly A polymerase head domain 54 183 1.4E-38 T 21-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 VFU_RS04375 b3b59f2368137381c056beb3ce2fcfe5 456 Gene3D G3DSA:3.30.460.10 35 182 4.2E-50 T 21-04-2016 VFU_RS04375 b3b59f2368137381c056beb3ce2fcfe5 456 Gene3D G3DSA:1.10.3090.10 183 418 1.3E-50 T 21-04-2016 VFU_RS04375 b3b59f2368137381c056beb3ce2fcfe5 456 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 210 270 1.0E-21 T 21-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain VFU_RS04375 b3b59f2368137381c056beb3ce2fcfe5 456 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 7 448 37.762 T 21-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 VFU_RS04375 b3b59f2368137381c056beb3ce2fcfe5 456 Pfam PF12626 Polymerase A arginine-rich C-terminus 330 448 3.8E-37 T 21-04-2016 IPR025866 Polymerase A arginine-rich C-terminal domain VFU_RS04375 b3b59f2368137381c056beb3ce2fcfe5 456 PANTHER PTHR13734:SF47 19 317 3.9E-129 T 21-04-2016 VFU_RS04375 b3b59f2368137381c056beb3ce2fcfe5 456 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 23 453 3.5E-159 T 21-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 VFU_RS06600 019efd08f7a31934ac4b7a957bb15b6f 313 SUPERFAMILY SSF52172 183 310 1.24E-21 T 21-04-2016 IPR011006 CheY-like superfamily VFU_RS06600 019efd08f7a31934ac4b7a957bb15b6f 313 SMART SM00448 184 305 1.5E-12 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS06600 019efd08f7a31934ac4b7a957bb15b6f 313 Gene3D G3DSA:3.40.50.2300 183 310 7.0E-24 T 21-04-2016 VFU_RS06600 019efd08f7a31934ac4b7a957bb15b6f 313 Gene3D G3DSA:2.30.30.40 98 137 2.7E-4 T 21-04-2016 VFU_RS06600 019efd08f7a31934ac4b7a957bb15b6f 313 Pfam PF00072 Response regulator receiver domain 186 306 1.7E-14 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS06600 019efd08f7a31934ac4b7a957bb15b6f 313 PANTHER PTHR22617 1 174 5.2E-87 T 21-04-2016 VFU_RS06600 019efd08f7a31934ac4b7a957bb15b6f 313 PIRSF PIRSF002867 1 312 1.2E-104 T 21-04-2016 IPR024181 Chemotaxis response regulator CheV VFU_RS06600 019efd08f7a31934ac4b7a957bb15b6f 313 Gene3D G3DSA:2.40.50.180 61 97 6.5E-5 T 21-04-2016 VFU_RS06600 019efd08f7a31934ac4b7a957bb15b6f 313 SMART SM00260 17 158 2.5E-27 T 21-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VFU_RS06600 019efd08f7a31934ac4b7a957bb15b6f 313 SUPERFAMILY SSF50341 16 161 4.71E-34 T 21-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VFU_RS06600 019efd08f7a31934ac4b7a957bb15b6f 313 PANTHER PTHR22617:SF37 1 174 5.2E-87 T 21-04-2016 VFU_RS06600 019efd08f7a31934ac4b7a957bb15b6f 313 Pfam PF01584 CheW-like domain 21 160 6.5E-35 T 21-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VFU_RS02845 3bd2be192d99c02db465748cd3954704 228 SUPERFAMILY SSF52172 1 123 8.97E-38 T 21-04-2016 IPR011006 CheY-like superfamily VFU_RS02845 3bd2be192d99c02db465748cd3954704 228 PANTHER PTHR26402:SF614 2 224 1.7E-77 T 21-04-2016 VFU_RS02845 3bd2be192d99c02db465748cd3954704 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 224 1.4E-19 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VFU_RS02845 3bd2be192d99c02db465748cd3954704 228 Pfam PF00072 Response regulator receiver domain 4 112 4.0E-27 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS02845 3bd2be192d99c02db465748cd3954704 228 Gene3D G3DSA:3.40.50.2300 2 122 3.7E-38 T 21-04-2016 VFU_RS02845 3bd2be192d99c02db465748cd3954704 228 PANTHER PTHR26402 2 224 1.7E-77 T 21-04-2016 VFU_RS02845 3bd2be192d99c02db465748cd3954704 228 SMART SM00862 148 224 4.1E-21 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VFU_RS02845 3bd2be192d99c02db465748cd3954704 228 Gene3D G3DSA:1.10.10.10 125 226 3.6E-26 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS02845 3bd2be192d99c02db465748cd3954704 228 SMART SM00448 2 111 7.6E-43 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS02845 3bd2be192d99c02db465748cd3954704 228 SUPERFAMILY SSF46894 124 225 5.67E-24 T 21-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VFU_RS14250 3e3380e7e6078b6bf57cb1f4f86edb79 453 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 449 32.961 T 21-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VFU_RS14250 3e3380e7e6078b6bf57cb1f4f86edb79 453 Pfam PF01225 Mur ligase family, catalytic domain 24 85 3.9E-9 T 21-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 VFU_RS14250 3e3380e7e6078b6bf57cb1f4f86edb79 453 PANTHER PTHR23135:SF3 11 450 1.6E-150 T 21-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VFU_RS14250 3e3380e7e6078b6bf57cb1f4f86edb79 453 SUPERFAMILY SSF63418 1 96 4.58E-25 T 21-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 VFU_RS14250 3e3380e7e6078b6bf57cb1f4f86edb79 453 Pfam PF02875 Mur ligase family, glutamate ligase domain 314 390 1.5E-12 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VFU_RS14250 3e3380e7e6078b6bf57cb1f4f86edb79 453 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 448 7.9E-141 T 21-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VFU_RS14250 3e3380e7e6078b6bf57cb1f4f86edb79 453 SUPERFAMILY SSF53623 100 311 1.09E-54 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VFU_RS14250 3e3380e7e6078b6bf57cb1f4f86edb79 453 PANTHER PTHR23135 11 450 1.6E-150 T 21-04-2016 VFU_RS14250 3e3380e7e6078b6bf57cb1f4f86edb79 453 Pfam PF08245 Mur ligase middle domain 105 294 2.2E-46 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VFU_RS14250 3e3380e7e6078b6bf57cb1f4f86edb79 453 Gene3D G3DSA:3.90.190.20 314 451 1.3E-38 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VFU_RS14250 3e3380e7e6078b6bf57cb1f4f86edb79 453 Gene3D G3DSA:3.40.1390.10 1 80 4.8E-25 T 21-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 VFU_RS14250 3e3380e7e6078b6bf57cb1f4f86edb79 453 SUPERFAMILY SSF53244 314 448 2.56E-32 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VFU_RS14250 3e3380e7e6078b6bf57cb1f4f86edb79 453 Gene3D G3DSA:3.40.1190.10 83 311 7.0E-71 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VFU_RS13025 8e9c5879e53983e0946d34a23d1fd92c 521 SMART SM00267 351 521 7.1E-40 T 21-04-2016 IPR000160 GGDEF domain VFU_RS13025 8e9c5879e53983e0946d34a23d1fd92c 521 Gene3D G3DSA:3.30.70.270 363 519 9.8E-43 T 21-04-2016 VFU_RS13025 8e9c5879e53983e0946d34a23d1fd92c 521 Pfam PF00990 Diguanylate cyclase, GGDEF domain 363 517 7.5E-38 T 21-04-2016 IPR000160 GGDEF domain VFU_RS13025 8e9c5879e53983e0946d34a23d1fd92c 521 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 361 519 1.8E-37 T 21-04-2016 IPR000160 GGDEF domain VFU_RS13025 8e9c5879e53983e0946d34a23d1fd92c 521 SUPERFAMILY SSF55073 366 519 6.12E-38 T 21-04-2016 IPR029787 Nucleotide cyclase VFU_RS10525 22100298b5e8f0a3b238dd0ffc9339c6 565 ProSitePatterns PS01233 Urocanase signature. 444 459 - T 21-04-2016 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VFU_RS10525 22100298b5e8f0a3b238dd0ffc9339c6 565 Pfam PF01175 Urocanase 17 549 6.9E-260 T 21-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VFU_RS10525 22100298b5e8f0a3b238dd0ffc9339c6 565 PIRSF PIRSF001423 1 563 4.0E-295 T 21-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VFU_RS10525 22100298b5e8f0a3b238dd0ffc9339c6 565 TIGRFAM TIGR01228 hutU: urocanate hydratase 15 556 1.0E-291 T 21-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VFU_RS10525 22100298b5e8f0a3b238dd0ffc9339c6 565 PANTHER PTHR12216:SF3 5 557 0.0 T 21-04-2016 VFU_RS10525 22100298b5e8f0a3b238dd0ffc9339c6 565 SUPERFAMILY SSF111326 11 557 2.35E-260 T 21-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VFU_RS10525 22100298b5e8f0a3b238dd0ffc9339c6 565 PANTHER PTHR12216 5 557 0.0 T 21-04-2016 VFU_RS10525 22100298b5e8f0a3b238dd0ffc9339c6 565 Gene3D G3DSA:3.40.50.10730 147 351 5.2E-90 T 21-04-2016 VFU_RS10525 22100298b5e8f0a3b238dd0ffc9339c6 565 Hamap MF_00577 Urocanate hydratase [hutU]. 4 558 49.488 T 21-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VFU_RS10525 22100298b5e8f0a3b238dd0ffc9339c6 565 Gene3D G3DSA:3.40.1770.10 362 557 6.4E-164 T 21-04-2016 VFU_RS10525 22100298b5e8f0a3b238dd0ffc9339c6 565 Gene3D G3DSA:3.40.1770.10 14 146 6.4E-164 T 21-04-2016 VFU_RS07160 9ab2cd65cb1589e4c35ce409728c5e7e 204 PANTHER PTHR26402 8 192 3.2E-66 T 21-04-2016 VFU_RS07160 9ab2cd65cb1589e4c35ce409728c5e7e 204 Gene3D G3DSA:3.40.50.2300 9 147 5.2E-32 T 21-04-2016 VFU_RS07160 9ab2cd65cb1589e4c35ce409728c5e7e 204 Pfam PF00196 Bacterial regulatory proteins, luxR family 141 193 9.1E-18 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VFU_RS07160 9ab2cd65cb1589e4c35ce409728c5e7e 204 PANTHER PTHR26402:SF599 8 192 3.2E-66 T 21-04-2016 VFU_RS07160 9ab2cd65cb1589e4c35ce409728c5e7e 204 SUPERFAMILY SSF46894 134 198 3.37E-16 T 21-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VFU_RS07160 9ab2cd65cb1589e4c35ce409728c5e7e 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 184 1.4E-11 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VFU_RS07160 9ab2cd65cb1589e4c35ce409728c5e7e 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 172 1.4E-11 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VFU_RS07160 9ab2cd65cb1589e4c35ce409728c5e7e 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 156 1.4E-11 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VFU_RS07160 9ab2cd65cb1589e4c35ce409728c5e7e 204 SMART SM00448 8 119 1.7E-25 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS07160 9ab2cd65cb1589e4c35ce409728c5e7e 204 Pfam PF00072 Response regulator receiver domain 10 119 2.6E-25 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS07160 9ab2cd65cb1589e4c35ce409728c5e7e 204 Gene3D G3DSA:1.10.10.10 148 198 3.3E-18 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS07160 9ab2cd65cb1589e4c35ce409728c5e7e 204 SMART SM00421 139 196 1.2E-16 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VFU_RS07160 9ab2cd65cb1589e4c35ce409728c5e7e 204 ProSitePatterns PS00622 LuxR-type HTH domain signature. 156 183 - T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VFU_RS07160 9ab2cd65cb1589e4c35ce409728c5e7e 204 SUPERFAMILY SSF52172 8 136 1.28E-31 T 21-04-2016 IPR011006 CheY-like superfamily VFU_RS00070 4454bcbff45896417ec85ae542aa4fc5 429 PANTHER PTHR10229:SF0 1 420 1.1E-186 T 21-04-2016 VFU_RS00070 4454bcbff45896417ec85ae542aa4fc5 429 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 3.5E-156 T 21-04-2016 IPR016496 GTPase HflX GO:0005525 VFU_RS00070 4454bcbff45896417ec85ae542aa4fc5 429 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 4.0E-32 T 21-04-2016 IPR025121 GTPase HflX, N-terminal VFU_RS00070 4454bcbff45896417ec85ae542aa4fc5 429 Gene3D G3DSA:3.40.50.300 197 361 1.8E-34 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS00070 4454bcbff45896417ec85ae542aa4fc5 429 SUPERFAMILY SSF54980 365 428 8.63E-17 T 21-04-2016 IPR009022 Elongation factor G, III-V domain VFU_RS00070 4454bcbff45896417ec85ae542aa4fc5 429 Hamap MF_00900 GTPase HflX [hflX]. 27 390 45.945 T 21-04-2016 IPR016496 GTPase HflX GO:0005525 VFU_RS00070 4454bcbff45896417ec85ae542aa4fc5 429 SUPERFAMILY SSF52540 197 369 1.05E-40 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS00070 4454bcbff45896417ec85ae542aa4fc5 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 2.6E-10 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 VFU_RS00070 4454bcbff45896417ec85ae542aa4fc5 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 2.6E-10 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 VFU_RS00070 4454bcbff45896417ec85ae542aa4fc5 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 2.6E-10 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 VFU_RS00070 4454bcbff45896417ec85ae542aa4fc5 429 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 5.3E-28 T 21-04-2016 IPR032305 GTP-binding protein, middle domain VFU_RS00070 4454bcbff45896417ec85ae542aa4fc5 429 PANTHER PTHR10229 1 420 1.1E-186 T 21-04-2016 IPR016496 GTPase HflX GO:0005525 VFU_RS00070 4454bcbff45896417ec85ae542aa4fc5 429 PIRSF PIRSF006809 3 423 1.0E-150 T 21-04-2016 IPR016496 GTPase HflX GO:0005525 VFU_RS00070 4454bcbff45896417ec85ae542aa4fc5 429 Pfam PF01926 50S ribosome-binding GTPase 200 318 1.2E-20 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 VFU_RS12520 a8d07ff1e06cb5f495d3f0bebb643731 676 Pfam PF02151 UvrB/uvrC motif 636 671 1.8E-8 T 21-04-2016 IPR001943 UVR domain GO:0005515 VFU_RS12520 a8d07ff1e06cb5f495d3f0bebb643731 676 Pfam PF00271 Helicase conserved C-terminal domain 436 546 2.0E-18 T 21-04-2016 IPR001650 Helicase, C-terminal VFU_RS12520 a8d07ff1e06cb5f495d3f0bebb643731 676 Gene3D G3DSA:3.30.2060.10 159 231 1.0E-11 T 21-04-2016 VFU_RS12520 a8d07ff1e06cb5f495d3f0bebb643731 676 SUPERFAMILY SSF46600 625 672 1.83E-11 T 21-04-2016 IPR001943 UVR domain GO:0005515 VFU_RS12520 a8d07ff1e06cb5f495d3f0bebb643731 676 Pfam PF04851 Type III restriction enzyme, res subunit 13 92 1.0E-8 T 21-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VFU_RS12520 a8d07ff1e06cb5f495d3f0bebb643731 676 SMART SM00487 9 427 5.6E-28 T 21-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VFU_RS12520 a8d07ff1e06cb5f495d3f0bebb643731 676 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 671 43.022 T 21-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 VFU_RS12520 a8d07ff1e06cb5f495d3f0bebb643731 676 SUPERFAMILY SSF52540 3 416 1.67E-136 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS12520 a8d07ff1e06cb5f495d3f0bebb643731 676 SMART SM00490 461 547 7.8E-19 T 21-04-2016 IPR001650 Helicase, C-terminal VFU_RS12520 a8d07ff1e06cb5f495d3f0bebb643731 676 SUPERFAMILY SSF52540 37 82 6.61E-35 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS12520 a8d07ff1e06cb5f495d3f0bebb643731 676 SUPERFAMILY SSF52540 460 581 6.61E-35 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS12520 a8d07ff1e06cb5f495d3f0bebb643731 676 Gene3D G3DSA:4.10.860.10 618 672 4.4E-18 T 21-04-2016 IPR001943 UVR domain GO:0005515 VFU_RS12520 a8d07ff1e06cb5f495d3f0bebb643731 676 Gene3D G3DSA:3.40.50.300 389 407 6.7E-52 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS12520 a8d07ff1e06cb5f495d3f0bebb643731 676 Gene3D G3DSA:3.40.50.300 279 339 6.7E-52 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS12520 a8d07ff1e06cb5f495d3f0bebb643731 676 Gene3D G3DSA:3.40.50.300 5 89 6.7E-52 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS12520 a8d07ff1e06cb5f495d3f0bebb643731 676 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 669 0.0 T 21-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 VFU_RS12520 a8d07ff1e06cb5f495d3f0bebb643731 676 Gene3D G3DSA:3.40.50.300 423 581 8.2E-39 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS12520 a8d07ff1e06cb5f495d3f0bebb643731 676 PANTHER PTHR24029 1 673 0.0 T 21-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 VFU_RS12520 a8d07ff1e06cb5f495d3f0bebb643731 676 Pfam PF12344 Ultra-violet resistance protein B 553 594 2.7E-20 T 21-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain VFU_RS07300 cf8d9391e370307a57cd8659a6fb9074 347 PANTHER PTHR30472:SF24 6 344 3.2E-139 T 21-04-2016 VFU_RS07300 cf8d9391e370307a57cd8659a6fb9074 347 Pfam PF01032 FecCD transport family 36 343 1.3E-78 T 21-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 VFU_RS07300 cf8d9391e370307a57cd8659a6fb9074 347 SUPERFAMILY SSF81345 20 343 3.66E-67 T 21-04-2016 IPR029022 ABC transporter, BtuC-like VFU_RS07300 cf8d9391e370307a57cd8659a6fb9074 347 Gene3D G3DSA:1.10.3470.10 26 345 1.0E-84 T 21-04-2016 IPR029022 ABC transporter, BtuC-like VFU_RS07300 cf8d9391e370307a57cd8659a6fb9074 347 PANTHER PTHR30472 6 344 3.2E-139 T 21-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 VFU_RS15370 12f79b50091cd20fd5b65ddc9641adce 122 SUPERFAMILY SSF54995 1 103 1.19E-38 T 21-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 VFU_RS15370 12f79b50091cd20fd5b65ddc9641adce 122 Gene3D G3DSA:3.30.70.60 1 103 1.1E-42 T 21-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 VFU_RS15370 12f79b50091cd20fd5b65ddc9641adce 122 PANTHER PTHR21011:SF1 1 116 5.5E-42 T 21-04-2016 VFU_RS15370 12f79b50091cd20fd5b65ddc9641adce 122 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 21-04-2016 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 VFU_RS15370 12f79b50091cd20fd5b65ddc9641adce 122 PANTHER PTHR21011 1 116 5.5E-42 T 21-04-2016 VFU_RS15370 12f79b50091cd20fd5b65ddc9641adce 122 Pfam PF01250 Ribosomal protein S6 3 91 8.6E-29 T 21-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 VFU_RS15370 12f79b50091cd20fd5b65ddc9641adce 122 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 6.9E-39 T 21-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 VFU_RS15370 12f79b50091cd20fd5b65ddc9641adce 122 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 22.153 T 21-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 VFU_RS04385 59a4efd3ff10fd1953f4baccd4064eb0 148 PANTHER PTHR33823 5 146 2.1E-68 T 21-04-2016 VFU_RS04385 59a4efd3ff10fd1953f4baccd4064eb0 148 PANTHER PTHR33823:SF2 5 146 2.1E-68 T 21-04-2016 VFU_RS04385 59a4efd3ff10fd1953f4baccd4064eb0 148 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 111 135 - T 21-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site VFU_RS04385 59a4efd3ff10fd1953f4baccd4064eb0 148 SUPERFAMILY SSF57716 108 146 6.27E-10 T 21-04-2016 VFU_RS04385 59a4efd3ff10fd1953f4baccd4064eb0 148 SUPERFAMILY SSF109635 7 107 2.88E-37 T 21-04-2016 VFU_RS04385 59a4efd3ff10fd1953f4baccd4064eb0 148 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 108 140 5.8E-10 T 21-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 VFU_RS04385 59a4efd3ff10fd1953f4baccd4064eb0 148 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 25 147 29.904 T 21-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 VFU_RS04385 59a4efd3ff10fd1953f4baccd4064eb0 148 PRINTS PR00618 DksA/TraR zinc finger signature 123 135 8.9E-5 T 21-04-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria VFU_RS04385 59a4efd3ff10fd1953f4baccd4064eb0 148 PRINTS PR00618 DksA/TraR zinc finger signature 111 122 8.9E-5 T 21-04-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria VFU_RS04385 59a4efd3ff10fd1953f4baccd4064eb0 148 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 29 137 5.5E-51 T 21-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 VFU_RS13555 9801fdfd0d0e7091825a75a0d609c9ba 267 Gene3D G3DSA:3.40.190.80 152 259 5.7E-38 T 21-04-2016 VFU_RS13555 9801fdfd0d0e7091825a75a0d609c9ba 267 PANTHER PTHR20854:SF4 1 260 8.6E-104 T 21-04-2016 VFU_RS13555 9801fdfd0d0e7091825a75a0d609c9ba 267 SUPERFAMILY SSF56655 1 259 1.7E-83 T 21-04-2016 VFU_RS13555 9801fdfd0d0e7091825a75a0d609c9ba 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 1.6E-33 T 21-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VFU_RS13555 9801fdfd0d0e7091825a75a0d609c9ba 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 1.6E-33 T 21-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VFU_RS13555 9801fdfd0d0e7091825a75a0d609c9ba 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 1.6E-33 T 21-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VFU_RS13555 9801fdfd0d0e7091825a75a0d609c9ba 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 1.6E-33 T 21-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VFU_RS13555 9801fdfd0d0e7091825a75a0d609c9ba 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 3.3E-57 T 21-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VFU_RS13555 9801fdfd0d0e7091825a75a0d609c9ba 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 3.3E-57 T 21-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VFU_RS13555 9801fdfd0d0e7091825a75a0d609c9ba 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 3.3E-57 T 21-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VFU_RS13555 9801fdfd0d0e7091825a75a0d609c9ba 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 3.3E-57 T 21-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VFU_RS13555 9801fdfd0d0e7091825a75a0d609c9ba 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 3.3E-57 T 21-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VFU_RS13555 9801fdfd0d0e7091825a75a0d609c9ba 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 3.3E-57 T 21-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VFU_RS13555 9801fdfd0d0e7091825a75a0d609c9ba 267 Gene3D G3DSA:3.30.540.10 2 151 6.5E-53 T 21-04-2016 VFU_RS13555 9801fdfd0d0e7091825a75a0d609c9ba 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 21-04-2016 IPR020583 Inositol monophosphatase, metal-binding site VFU_RS13555 9801fdfd0d0e7091825a75a0d609c9ba 267 PANTHER PTHR20854 1 260 8.6E-104 T 21-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VFU_RS13555 9801fdfd0d0e7091825a75a0d609c9ba 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 21-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 VFU_RS13555 9801fdfd0d0e7091825a75a0d609c9ba 267 Pfam PF00459 Inositol monophosphatase family 2 259 4.1E-69 T 21-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VFU_RS05970 03421bc84355bbd358748acc9bfdcb89 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 102 117 1.1E-27 T 21-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VFU_RS05970 03421bc84355bbd358748acc9bfdcb89 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 89 102 1.1E-27 T 21-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VFU_RS05970 03421bc84355bbd358748acc9bfdcb89 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 56 72 1.1E-27 T 21-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VFU_RS05970 03421bc84355bbd358748acc9bfdcb89 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 73 89 1.1E-27 T 21-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VFU_RS05970 03421bc84355bbd358748acc9bfdcb89 136 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 54 128 3.2E-33 T 21-04-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 VFU_RS05970 03421bc84355bbd358748acc9bfdcb89 136 SUPERFAMILY SSF101801 54 134 6.02E-25 T 21-04-2016 IPR001543 Surface presentation of antigen (SpoA) VFU_RS05970 03421bc84355bbd358748acc9bfdcb89 136 PANTHER PTHR22617 1 135 5.6E-36 T 21-04-2016 VFU_RS05970 03421bc84355bbd358748acc9bfdcb89 136 Gene3D G3DSA:2.30.330.10 47 136 8.6E-38 T 21-04-2016 VFU_RS05970 03421bc84355bbd358748acc9bfdcb89 136 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 56 126 1.8E-24 T 21-04-2016 IPR001543 Surface presentation of antigen (SpoA) VFU_RS12500 86ee3eea0e1790e643a44055cce16d2e 329 PANTHER PTHR22960 7 285 4.2E-125 T 21-04-2016 VFU_RS12500 86ee3eea0e1790e643a44055cce16d2e 329 SMART SM00729 14 220 7.7E-4 T 21-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 VFU_RS12500 86ee3eea0e1790e643a44055cce16d2e 329 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 6 329 1.5E-102 T 21-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 VFU_RS12500 86ee3eea0e1790e643a44055cce16d2e 329 Gene3D G3DSA:3.20.20.70 5 306 7.3E-68 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS12500 86ee3eea0e1790e643a44055cce16d2e 329 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 5 329 36.133 T 21-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 VFU_RS12500 86ee3eea0e1790e643a44055cce16d2e 329 Pfam PF06463 Molybdenum Cofactor Synthesis C 186 312 2.5E-38 T 21-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 VFU_RS12500 86ee3eea0e1790e643a44055cce16d2e 329 Pfam PF13353 4Fe-4S single cluster domain 23 125 5.8E-8 T 21-04-2016 VFU_RS12500 86ee3eea0e1790e643a44055cce16d2e 329 Pfam PF04055 Radical SAM superfamily 19 181 5.9E-23 T 21-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VFU_RS12500 86ee3eea0e1790e643a44055cce16d2e 329 SUPERFAMILY SSF102114 7 278 2.88E-66 T 21-04-2016 VFU_RS14210 aa16221d8129a3797856523c2fda73df 405 SMART SM00865 207 325 1.1E-55 T 21-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain VFU_RS14210 aa16221d8129a3797856523c2fda73df 405 Gene3D G3DSA:3.40.50.1440 14 214 2.5E-93 T 21-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 VFU_RS14210 aa16221d8129a3797856523c2fda73df 405 SMART SM00864 13 205 2.0E-113 T 21-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 VFU_RS14210 aa16221d8129a3797856523c2fda73df 405 SUPERFAMILY SSF55307 204 320 9.39E-43 T 21-04-2016 IPR008280 Tubulin/FtsZ, C-terminal VFU_RS14210 aa16221d8129a3797856523c2fda73df 405 Pfam PF12327 FtsZ family, C-terminal domain 222 316 3.8E-36 T 21-04-2016 IPR024757 Cell division protein FtsZ, C-terminal VFU_RS14210 aa16221d8129a3797856523c2fda73df 405 PANTHER PTHR30314:SF3 1 403 7.6E-206 T 21-04-2016 VFU_RS14210 aa16221d8129a3797856523c2fda73df 405 PANTHER PTHR30314 1 403 7.6E-206 T 21-04-2016 VFU_RS14210 aa16221d8129a3797856523c2fda73df 405 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 21-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 VFU_RS14210 aa16221d8129a3797856523c2fda73df 405 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 21-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 VFU_RS14210 aa16221d8129a3797856523c2fda73df 405 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 392 38.237 T 21-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 VFU_RS14210 aa16221d8129a3797856523c2fda73df 405 PRINTS PR00423 Cell division protein FtsZ signature 189 211 4.6E-52 T 21-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 VFU_RS14210 aa16221d8129a3797856523c2fda73df 405 PRINTS PR00423 Cell division protein FtsZ signature 212 233 4.6E-52 T 21-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 VFU_RS14210 aa16221d8129a3797856523c2fda73df 405 PRINTS PR00423 Cell division protein FtsZ signature 126 147 4.6E-52 T 21-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 VFU_RS14210 aa16221d8129a3797856523c2fda73df 405 PRINTS PR00423 Cell division protein FtsZ signature 98 118 4.6E-52 T 21-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 VFU_RS14210 aa16221d8129a3797856523c2fda73df 405 SUPERFAMILY SSF52490 13 208 5.63E-69 T 21-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 VFU_RS14210 aa16221d8129a3797856523c2fda73df 405 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 1.0E-39 T 21-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 VFU_RS14210 aa16221d8129a3797856523c2fda73df 405 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 331 1.5E-136 T 21-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 VFU_RS14210 aa16221d8129a3797856523c2fda73df 405 Gene3D G3DSA:3.30.1330.20 215 321 3.5E-47 T 21-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain VFU_RS07275 99c06328f1288ed215d533b953942357 1547 Gene3D G3DSA:3.30.300.30 1343 1442 7.1E-20 T 21-04-2016 VFU_RS07275 99c06328f1288ed215d533b953942357 1547 Gene3D G3DSA:3.40.50.980 943 1093 3.6E-36 T 21-04-2016 VFU_RS07275 99c06328f1288ed215d533b953942357 1547 PANTHER PTHR24095:SF137 429 638 9.0E-139 T 21-04-2016 VFU_RS07275 99c06328f1288ed215d533b953942357 1547 PANTHER PTHR24095:SF137 663 1532 9.0E-139 T 21-04-2016 VFU_RS07275 99c06328f1288ed215d533b953942357 1547 SUPERFAMILY SSF52777 667 884 2.67E-26 T 21-04-2016 VFU_RS07275 99c06328f1288ed215d533b953942357 1547 PANTHER PTHR24095 429 638 9.0E-139 T 21-04-2016 VFU_RS07275 99c06328f1288ed215d533b953942357 1547 PANTHER PTHR24095 663 1532 9.0E-139 T 21-04-2016 VFU_RS07275 99c06328f1288ed215d533b953942357 1547 SUPERFAMILY SSF52777 182 426 1.56E-30 T 21-04-2016 VFU_RS07275 99c06328f1288ed215d533b953942357 1547 Pfam PF00668 Condensation domain 454 752 4.9E-19 T 21-04-2016 IPR001242 Condensation domain VFU_RS07275 99c06328f1288ed215d533b953942357 1547 Pfam PF00668 Condensation domain 4 288 3.4E-36 T 21-04-2016 IPR001242 Condensation domain VFU_RS07275 99c06328f1288ed215d533b953942357 1547 SUPERFAMILY SSF52777 4 174 5.26E-19 T 21-04-2016 VFU_RS07275 99c06328f1288ed215d533b953942357 1547 Pfam PF08415 Nonribosomal peptide synthase 795 848 5.3E-6 T 21-04-2016 IPR013624 Non-ribosomal peptide synthetase VFU_RS07275 99c06328f1288ed215d533b953942357 1547 Pfam PF08415 Nonribosomal peptide synthase 316 371 4.7E-13 T 21-04-2016 IPR013624 Non-ribosomal peptide synthetase VFU_RS07275 99c06328f1288ed215d533b953942357 1547 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 966 1370 4.7E-109 T 21-04-2016 IPR010071 Amino acid adenylation domain VFU_RS07275 99c06328f1288ed215d533b953942357 1547 Gene3D G3DSA:2.30.38.10 1258 1335 2.8E-16 T 21-04-2016 VFU_RS07275 99c06328f1288ed215d533b953942357 1547 Pfam PF00501 AMP-binding enzyme 951 1346 3.8E-83 T 21-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VFU_RS07275 99c06328f1288ed215d533b953942357 1547 Pfam PF13193 AMP-binding enzyme C-terminal domain 1355 1430 2.2E-5 T 21-04-2016 IPR025110 AMP-binding enzyme C-terminal domain VFU_RS07275 99c06328f1288ed215d533b953942357 1547 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1089 1100 - T 21-04-2016 IPR020845 AMP-binding, conserved site VFU_RS07275 99c06328f1288ed215d533b953942357 1547 SUPERFAMILY SSF52777 451 630 7.45E-12 T 21-04-2016 VFU_RS07275 99c06328f1288ed215d533b953942357 1547 SUPERFAMILY SSF56801 924 1443 6.02E-127 T 21-04-2016 VFU_RS07275 99c06328f1288ed215d533b953942357 1547 SUPERFAMILY SSF52777 670 676 7.45E-12 T 21-04-2016 VFU_RS07275 99c06328f1288ed215d533b953942357 1547 Gene3D G3DSA:3.40.50.980 1094 1257 1.5E-37 T 21-04-2016 VFU_RS12975 37493e146f5dddb9bb8f1b1037337e3a 317 Gene3D G3DSA:3.40.50.2300 57 174 5.3E-23 T 21-04-2016 VFU_RS12975 37493e146f5dddb9bb8f1b1037337e3a 317 Gene3D G3DSA:3.40.50.2300 175 277 2.2E-36 T 21-04-2016 VFU_RS12975 37493e146f5dddb9bb8f1b1037337e3a 317 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 4 303 8.6E-136 T 21-04-2016 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 VFU_RS12975 37493e146f5dddb9bb8f1b1037337e3a 317 Gene3D G3DSA:1.10.260.40 6 56 5.3E-23 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VFU_RS12975 37493e146f5dddb9bb8f1b1037337e3a 317 SUPERFAMILY SSF53822 63 302 1.2E-57 T 21-04-2016 IPR028082 Periplasmic binding protein-like I VFU_RS12975 37493e146f5dddb9bb8f1b1037337e3a 317 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 4.6E-19 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VFU_RS12975 37493e146f5dddb9bb8f1b1037337e3a 317 PANTHER PTHR30146 4 315 5.9E-171 T 21-04-2016 VFU_RS12975 37493e146f5dddb9bb8f1b1037337e3a 317 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VFU_RS12975 37493e146f5dddb9bb8f1b1037337e3a 317 PANTHER PTHR30146:SF42 4 315 5.9E-171 T 21-04-2016 VFU_RS12975 37493e146f5dddb9bb8f1b1037337e3a 317 SMART SM00354 4 74 4.1E-30 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VFU_RS12975 37493e146f5dddb9bb8f1b1037337e3a 317 Pfam PF13377 Periplasmic binding protein-like domain 169 301 9.6E-18 T 21-04-2016 VFU_RS12975 37493e146f5dddb9bb8f1b1037337e3a 317 SUPERFAMILY SSF47413 3 60 5.06E-16 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VFU_RS07385 4234253ea3f46a388a0959051df8956b 484 SUPERFAMILY SSF56954 64 480 1.96E-88 T 21-04-2016 VFU_RS07385 4234253ea3f46a388a0959051df8956b 484 SUPERFAMILY SSF56954 17 32 1.96E-88 T 21-04-2016 VFU_RS07385 4234253ea3f46a388a0959051df8956b 484 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 23 478 2.4E-153 T 21-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 VFU_RS07385 4234253ea3f46a388a0959051df8956b 484 PANTHER PTHR30203:SF6 1 481 1.4E-176 T 21-04-2016 VFU_RS07385 4234253ea3f46a388a0959051df8956b 484 PANTHER PTHR30203 1 481 1.4E-176 T 21-04-2016 VFU_RS07385 4234253ea3f46a388a0959051df8956b 484 Pfam PF02321 Outer membrane efflux protein 77 267 1.5E-15 T 21-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VFU_RS07385 4234253ea3f46a388a0959051df8956b 484 Pfam PF02321 Outer membrane efflux protein 300 475 4.8E-23 T 21-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VFU_RS07385 4234253ea3f46a388a0959051df8956b 484 Gene3D G3DSA:1.20.1600.10 155 327 6.5E-83 T 21-04-2016 VFU_RS07385 4234253ea3f46a388a0959051df8956b 484 Gene3D G3DSA:1.20.1600.10 63 103 6.5E-83 T 21-04-2016 VFU_RS07385 4234253ea3f46a388a0959051df8956b 484 Gene3D G3DSA:1.20.1600.10 365 479 6.5E-83 T 21-04-2016 VFU_RS07385 4234253ea3f46a388a0959051df8956b 484 Gene3D G3DSA:2.20.200.10 115 154 1.3E-24 T 21-04-2016 VFU_RS07385 4234253ea3f46a388a0959051df8956b 484 Gene3D G3DSA:2.20.200.10 328 363 1.3E-24 T 21-04-2016 VFU_RS11205 c21c34c50696dd47ebe95a0dd95a69f8 306 PANTHER PTHR33525 16 305 1.3E-110 T 21-04-2016 VFU_RS11205 c21c34c50696dd47ebe95a0dd95a69f8 306 SUPERFAMILY SSF109604 24 282 7.85E-38 T 21-04-2016 VFU_RS11205 c21c34c50696dd47ebe95a0dd95a69f8 306 PANTHER PTHR33525:SF2 16 305 1.3E-110 T 21-04-2016 VFU_RS11205 c21c34c50696dd47ebe95a0dd95a69f8 306 Gene3D G3DSA:1.10.3150.10 15 300 7.0E-51 T 21-04-2016 IPR013976 Metal-dependent hydrolase HDOD VFU_RS11205 c21c34c50696dd47ebe95a0dd95a69f8 306 Pfam PF08668 HDOD domain 39 233 1.3E-36 T 21-04-2016 IPR013976 Metal-dependent hydrolase HDOD VFU_RS10060 7d84b57d649deac0d48614f1b6091d2a 603 PANTHER PTHR23115 11 287 4.5E-71 T 21-04-2016 VFU_RS10060 7d84b57d649deac0d48614f1b6091d2a 603 SUPERFAMILY SSF52540 7 174 4.4E-41 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS10060 7d84b57d649deac0d48614f1b6091d2a 603 SUPERFAMILY SSF46785 552 597 1.64E-8 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS10060 7d84b57d649deac0d48614f1b6091d2a 603 Pfam PF09107 Elongation factor SelB, winged helix 557 597 4.5E-8 T 21-04-2016 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 VFU_RS10060 7d84b57d649deac0d48614f1b6091d2a 603 SUPERFAMILY SSF50447 189 272 1.1E-18 T 21-04-2016 IPR009000 Translation protein, beta-barrel domain VFU_RS10060 7d84b57d649deac0d48614f1b6091d2a 603 Gene3D G3DSA:2.40.30.10 190 284 1.2E-22 T 21-04-2016 VFU_RS10060 7d84b57d649deac0d48614f1b6091d2a 603 Pfam PF00009 Elongation factor Tu GTP binding domain 12 173 6.1E-31 T 21-04-2016 VFU_RS10060 7d84b57d649deac0d48614f1b6091d2a 603 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 11 593 6.9E-82 T 21-04-2016 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 VFU_RS10060 7d84b57d649deac0d48614f1b6091d2a 603 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 11 168 5.8E-18 T 21-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VFU_RS10060 7d84b57d649deac0d48614f1b6091d2a 603 PANTHER PTHR23115:SF129 11 287 4.5E-71 T 21-04-2016 VFU_RS10060 7d84b57d649deac0d48614f1b6091d2a 603 Gene3D G3DSA:1.10.10.10 542 598 2.2E-10 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS10060 7d84b57d649deac0d48614f1b6091d2a 603 Gene3D G3DSA:3.40.50.300 7 173 3.1E-39 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS00455 d5ba4ac2c96558c4c95b3404ae73c54c 398 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 264 289 - T 21-04-2016 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 VFU_RS00455 d5ba4ac2c96558c4c95b3404ae73c54c 398 Gene3D G3DSA:1.10.441.10 283 296 1.9E-30 T 21-04-2016 VFU_RS00455 d5ba4ac2c96558c4c95b3404ae73c54c 398 Gene3D G3DSA:1.10.441.10 147 240 1.9E-30 T 21-04-2016 VFU_RS00455 d5ba4ac2c96558c4c95b3404ae73c54c 398 Pfam PF01238 Phosphomannose isomerase type I 9 362 1.9E-82 T 21-04-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 VFU_RS00455 d5ba4ac2c96558c4c95b3404ae73c54c 398 Gene3D G3DSA:2.60.120.10 247 282 4.8E-63 T 21-04-2016 IPR014710 RmlC-like jelly roll fold VFU_RS00455 d5ba4ac2c96558c4c95b3404ae73c54c 398 Gene3D G3DSA:2.60.120.10 13 146 4.8E-63 T 21-04-2016 IPR014710 RmlC-like jelly roll fold VFU_RS00455 d5ba4ac2c96558c4c95b3404ae73c54c 398 PIRSF PIRSF001480 6 398 1.3E-100 T 21-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 VFU_RS00455 d5ba4ac2c96558c4c95b3404ae73c54c 398 SUPERFAMILY SSF51182 6 389 2.08E-102 T 21-04-2016 IPR011051 RmlC-like cupin domain VFU_RS00455 d5ba4ac2c96558c4c95b3404ae73c54c 398 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 132 140 - T 21-04-2016 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 VFU_RS00455 d5ba4ac2c96558c4c95b3404ae73c54c 398 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 8 389 1.0E-88 T 21-04-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 VFU_RS00455 d5ba4ac2c96558c4c95b3404ae73c54c 398 PANTHER PTHR10309:SF0 4 397 1.7E-132 T 21-04-2016 VFU_RS00455 d5ba4ac2c96558c4c95b3404ae73c54c 398 PANTHER PTHR10309 4 397 1.7E-132 T 21-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 VFU_RS00455 d5ba4ac2c96558c4c95b3404ae73c54c 398 PRINTS PR00714 Phosphomannose isomerase type I signature 132 155 1.4E-67 T 21-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 VFU_RS00455 d5ba4ac2c96558c4c95b3404ae73c54c 398 PRINTS PR00714 Phosphomannose isomerase type I signature 87 108 1.4E-67 T 21-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 VFU_RS00455 d5ba4ac2c96558c4c95b3404ae73c54c 398 PRINTS PR00714 Phosphomannose isomerase type I signature 11 29 1.4E-67 T 21-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 VFU_RS00455 d5ba4ac2c96558c4c95b3404ae73c54c 398 PRINTS PR00714 Phosphomannose isomerase type I signature 283 302 1.4E-67 T 21-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 VFU_RS00455 d5ba4ac2c96558c4c95b3404ae73c54c 398 PRINTS PR00714 Phosphomannose isomerase type I signature 229 244 1.4E-67 T 21-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 VFU_RS00455 d5ba4ac2c96558c4c95b3404ae73c54c 398 PRINTS PR00714 Phosphomannose isomerase type I signature 264 283 1.4E-67 T 21-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 VFU_RS00455 d5ba4ac2c96558c4c95b3404ae73c54c 398 PRINTS PR00714 Phosphomannose isomerase type I signature 245 264 1.4E-67 T 21-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 VFU_RS00455 d5ba4ac2c96558c4c95b3404ae73c54c 398 PRINTS PR00714 Phosphomannose isomerase type I signature 39 54 1.4E-67 T 21-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 VFU_RS00455 d5ba4ac2c96558c4c95b3404ae73c54c 398 Gene3D G3DSA:2.60.120.10 297 383 1.8E-6 T 21-04-2016 IPR014710 RmlC-like jelly roll fold VFU_RS14090 a399880e5c6c1859df4644c3dddb1991 310 Pfam PF04055 Radical SAM superfamily 43 201 3.3E-16 T 21-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VFU_RS14090 a399880e5c6c1859df4644c3dddb1991 310 PANTHER PTHR11135:SF1 1 290 2.8E-148 T 21-04-2016 IPR005911 Protein YhcC-like GO:0051536 VFU_RS14090 a399880e5c6c1859df4644c3dddb1991 310 PANTHER PTHR11135 1 290 2.8E-148 T 21-04-2016 VFU_RS14090 a399880e5c6c1859df4644c3dddb1991 310 SUPERFAMILY SSF102114 13 268 9.81E-50 T 21-04-2016 VFU_RS14090 a399880e5c6c1859df4644c3dddb1991 310 SMART SM00729 23 247 9.3E-45 T 21-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 VFU_RS14090 a399880e5c6c1859df4644c3dddb1991 310 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 300 7.2E-137 T 21-04-2016 IPR005911 Protein YhcC-like GO:0051536 VFU_RS14090 a399880e5c6c1859df4644c3dddb1991 310 Pfam PF16199 Radical_SAM C-terminal domain 209 280 3.7E-19 T 21-04-2016 IPR032432 Radical SAM, C-terminal extension VFU_RS14090 a399880e5c6c1859df4644c3dddb1991 310 Gene3D G3DSA:3.80.30.20 23 252 1.1E-34 T 21-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe VFU_RS06870 04b05a3ed455558b90932456f3af270a 100 SUPERFAMILY SSF143011 1 89 3.26E-5 T 21-04-2016 VFU_RS06870 04b05a3ed455558b90932456f3af270a 100 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 3 85 1.0E-7 T 21-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VFU_RS06870 04b05a3ed455558b90932456f3af270a 100 PANTHER PTHR33755:SF5 1 100 5.9E-44 T 21-04-2016 VFU_RS06870 04b05a3ed455558b90932456f3af270a 100 PANTHER PTHR33755 1 100 5.9E-44 T 21-04-2016 VFU_RS06870 04b05a3ed455558b90932456f3af270a 100 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 91 5.1E-19 T 21-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VFU_RS09000 b578181455026d663979bd5868b4df5c 430 PANTHER PTHR30061:SF7 15 427 2.0E-136 T 21-04-2016 VFU_RS09000 b578181455026d663979bd5868b4df5c 430 PANTHER PTHR30061 15 427 2.0E-136 T 21-04-2016 VFU_RS09000 b578181455026d663979bd5868b4df5c 430 SUPERFAMILY SSF53850 22 417 4.69E-71 T 21-04-2016 VFU_RS09000 b578181455026d663979bd5868b4df5c 430 Pfam PF13416 Bacterial extracellular solute-binding protein 40 354 4.7E-37 T 21-04-2016 VFU_RS09000 b578181455026d663979bd5868b4df5c 430 Gene3D G3DSA:3.40.190.10 142 339 2.1E-32 T 21-04-2016 VFU_RS07630 0d3c51173cb35ce53ba5e39f26e832ce 315 Pfam PF01207 Dihydrouridine synthase (Dus) 5 297 7.2E-76 T 21-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VFU_RS07630 0d3c51173cb35ce53ba5e39f26e832ce 315 PANTHER PTHR11082 1 314 3.0E-192 T 21-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VFU_RS07630 0d3c51173cb35ce53ba5e39f26e832ce 315 PANTHER PTHR11082:SF26 1 314 3.0E-192 T 21-04-2016 VFU_RS07630 0d3c51173cb35ce53ba5e39f26e832ce 315 SUPERFAMILY SSF51395 1 312 2.2E-72 T 21-04-2016 VFU_RS07630 0d3c51173cb35ce53ba5e39f26e832ce 315 Gene3D G3DSA:3.20.20.70 2 241 3.2E-61 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS07630 0d3c51173cb35ce53ba5e39f26e832ce 315 PIRSF PIRSF006621 1 314 8.1E-74 T 21-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VFU_RS07630 0d3c51173cb35ce53ba5e39f26e832ce 315 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 310 52.302 T 21-04-2016 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 VFU_RS07630 0d3c51173cb35ce53ba5e39f26e832ce 315 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 21-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 VFU_RS13750 7c6b5588a5d7e43ba124e988990a9be0 445 Pfam PF00696 Amino acid kinase family 25 270 6.6E-30 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VFU_RS13750 7c6b5588a5d7e43ba124e988990a9be0 445 SUPERFAMILY SSF53633 4 294 1.83E-69 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VFU_RS13750 7c6b5588a5d7e43ba124e988990a9be0 445 PANTHER PTHR30602 1 445 2.0E-292 T 21-04-2016 VFU_RS13750 7c6b5588a5d7e43ba124e988990a9be0 445 SUPERFAMILY SSF55729 254 422 3.04E-20 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase VFU_RS13750 7c6b5588a5d7e43ba124e988990a9be0 445 PIRSF PIRSF000423 1 445 7.6E-205 T 21-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 VFU_RS13750 7c6b5588a5d7e43ba124e988990a9be0 445 Pfam PF00583 Acetyltransferase (GNAT) family 345 417 3.6E-7 T 21-04-2016 IPR000182 GNAT domain GO:0008080 VFU_RS13750 7c6b5588a5d7e43ba124e988990a9be0 445 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 8 445 3.6E-214 T 21-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 VFU_RS13750 7c6b5588a5d7e43ba124e988990a9be0 445 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 445 224.452 T 21-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 VFU_RS13750 7c6b5588a5d7e43ba124e988990a9be0 445 Gene3D G3DSA:3.40.630.30 298 441 3.5E-44 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase VFU_RS13750 7c6b5588a5d7e43ba124e988990a9be0 445 PANTHER PTHR30602:SF3 1 445 2.0E-292 T 21-04-2016 VFU_RS13750 7c6b5588a5d7e43ba124e988990a9be0 445 Gene3D G3DSA:3.40.1160.10 23 294 1.9E-70 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VFU_RS14085 49537163b68de443f698a9dc9698a9fe 583 SMART SM00091 281 348 0.0052 T 21-04-2016 IPR000014 PAS domain VFU_RS14085 49537163b68de443f698a9dc9698a9fe 583 SMART SM00091 38 104 270.0 T 21-04-2016 IPR000014 PAS domain VFU_RS14085 49537163b68de443f698a9dc9698a9fe 583 SUPERFAMILY SSF55785 268 394 2.27E-17 T 21-04-2016 IPR000014 PAS domain VFU_RS14085 49537163b68de443f698a9dc9698a9fe 583 PANTHER PTHR10799:SF728 447 574 2.4E-38 T 21-04-2016 VFU_RS14085 49537163b68de443f698a9dc9698a9fe 583 PANTHER PTHR10799:SF728 257 332 2.4E-38 T 21-04-2016 VFU_RS14085 49537163b68de443f698a9dc9698a9fe 583 SUPERFAMILY SSF55785 163 253 4.54E-6 T 21-04-2016 IPR000014 PAS domain VFU_RS14085 49537163b68de443f698a9dc9698a9fe 583 PANTHER PTHR10799 447 574 2.4E-38 T 21-04-2016 VFU_RS14085 49537163b68de443f698a9dc9698a9fe 583 PANTHER PTHR10799 257 332 2.4E-38 T 21-04-2016 VFU_RS14085 49537163b68de443f698a9dc9698a9fe 583 Gene3D G3DSA:3.30.70.270 416 578 1.9E-53 T 21-04-2016 VFU_RS14085 49537163b68de443f698a9dc9698a9fe 583 SMART SM00267 403 579 1.0E-74 T 21-04-2016 IPR000160 GGDEF domain VFU_RS14085 49537163b68de443f698a9dc9698a9fe 583 SUPERFAMILY SSF55073 419 578 2.56E-49 T 21-04-2016 IPR029787 Nucleotide cyclase VFU_RS14085 49537163b68de443f698a9dc9698a9fe 583 Pfam PF08448 PAS fold 166 254 2.2E-5 T 21-04-2016 IPR013656 PAS fold-4 VFU_RS14085 49537163b68de443f698a9dc9698a9fe 583 Pfam PF08448 PAS fold 287 397 2.4E-19 T 21-04-2016 IPR013656 PAS fold-4 VFU_RS14085 49537163b68de443f698a9dc9698a9fe 583 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 278 403 1.1E-12 T 21-04-2016 IPR000014 PAS domain VFU_RS14085 49537163b68de443f698a9dc9698a9fe 583 Pfam PF00990 Diguanylate cyclase, GGDEF domain 415 575 1.5E-51 T 21-04-2016 IPR000160 GGDEF domain VFU_RS14085 49537163b68de443f698a9dc9698a9fe 583 Gene3D G3DSA:3.30.450.20 268 393 1.0E-17 T 21-04-2016 VFU_RS14085 49537163b68de443f698a9dc9698a9fe 583 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 410 578 6.5E-49 T 21-04-2016 IPR000160 GGDEF domain VFU_RS14085 49537163b68de443f698a9dc9698a9fe 583 Pfam PF13188 PAS domain 43 77 0.24 T 21-04-2016 IPR000014 PAS domain VFU_RS08265 7d66557a5b868406c1968cd215e26c7c 308 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS08265 7d66557a5b868406c1968cd215e26c7c 308 Pfam PF00005 ABC transporter 22 165 1.9E-33 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS08265 7d66557a5b868406c1968cd215e26c7c 308 SMART SM00382 30 212 1.5E-15 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS08265 7d66557a5b868406c1968cd215e26c7c 308 SUPERFAMILY SSF52540 5 228 2.25E-65 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS08265 7d66557a5b868406c1968cd215e26c7c 308 PANTHER PTHR24220 292 299 7.3E-102 T 21-04-2016 VFU_RS08265 7d66557a5b868406c1968cd215e26c7c 308 PANTHER PTHR24220 7 227 7.3E-102 T 21-04-2016 VFU_RS08265 7d66557a5b868406c1968cd215e26c7c 308 PANTHER PTHR24220:SF0 292 299 7.3E-102 T 21-04-2016 VFU_RS08265 7d66557a5b868406c1968cd215e26c7c 308 PANTHER PTHR24220:SF0 7 227 7.3E-102 T 21-04-2016 VFU_RS08265 7d66557a5b868406c1968cd215e26c7c 308 Gene3D G3DSA:3.40.50.300 2 228 9.1E-73 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS14560 a049251cb8691bbf9a4af43cc1ea14df 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 9.3E-7 T 21-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VFU_RS14560 a049251cb8691bbf9a4af43cc1ea14df 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 45 60 9.3E-7 T 21-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VFU_RS14560 a049251cb8691bbf9a4af43cc1ea14df 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 213 227 9.3E-7 T 21-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VFU_RS14560 a049251cb8691bbf9a4af43cc1ea14df 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 90 103 9.3E-7 T 21-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VFU_RS14560 a049251cb8691bbf9a4af43cc1ea14df 272 PANTHER PTHR10992 3 269 3.0E-99 T 21-04-2016 VFU_RS14560 a049251cb8691bbf9a4af43cc1ea14df 272 PANTHER PTHR10992:SF885 3 269 3.0E-99 T 21-04-2016 VFU_RS14560 a049251cb8691bbf9a4af43cc1ea14df 272 SUPERFAMILY SSF53474 1 269 2.34E-57 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold VFU_RS14560 a049251cb8691bbf9a4af43cc1ea14df 272 Pfam PF00561 alpha/beta hydrolase fold 23 255 2.3E-17 T 21-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VFU_RS14560 a049251cb8691bbf9a4af43cc1ea14df 272 PRINTS PR00412 Epoxide hydrolase signature 244 266 1.3E-7 T 21-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VFU_RS14560 a049251cb8691bbf9a4af43cc1ea14df 272 PRINTS PR00412 Epoxide hydrolase signature 45 60 1.3E-7 T 21-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VFU_RS14560 a049251cb8691bbf9a4af43cc1ea14df 272 PRINTS PR00412 Epoxide hydrolase signature 104 117 1.3E-7 T 21-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VFU_RS14560 a049251cb8691bbf9a4af43cc1ea14df 272 Gene3D G3DSA:3.40.50.1820 1 268 1.3E-54 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold VFU_RS11615 bdf8ed9b7a2667f6b91832dffec57060 402 Pfam PF12704 MacB-like periplasmic core domain 29 203 7.8E-15 T 21-04-2016 IPR025857 MacB-like periplasmic core domain VFU_RS11615 bdf8ed9b7a2667f6b91832dffec57060 402 PANTHER PTHR30489 1 402 4.3E-208 T 21-04-2016 VFU_RS11615 bdf8ed9b7a2667f6b91832dffec57060 402 Pfam PF02687 FtsX-like permease family 271 395 3.4E-18 T 21-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 VFU_RS11615 bdf8ed9b7a2667f6b91832dffec57060 402 PANTHER PTHR30489:SF8 1 402 4.3E-208 T 21-04-2016 VFU_RS11615 bdf8ed9b7a2667f6b91832dffec57060 402 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 402 7.4E-131 T 21-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 VFU_RS14070 642f5f7dcceaa7a01c5dc6d10e7f05f3 238 SMART SM00448 4 114 2.0E-37 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS14070 642f5f7dcceaa7a01c5dc6d10e7f05f3 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 2.7E-17 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VFU_RS14070 642f5f7dcceaa7a01c5dc6d10e7f05f3 238 PANTHER PTHR26402 4 238 7.7E-152 T 21-04-2016 VFU_RS14070 642f5f7dcceaa7a01c5dc6d10e7f05f3 238 PANTHER PTHR26402:SF586 4 238 7.7E-152 T 21-04-2016 VFU_RS14070 642f5f7dcceaa7a01c5dc6d10e7f05f3 238 SUPERFAMILY SSF46894 137 233 3.4E-21 T 21-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VFU_RS14070 642f5f7dcceaa7a01c5dc6d10e7f05f3 238 Pfam PF00072 Response regulator receiver domain 6 113 4.8E-27 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS14070 642f5f7dcceaa7a01c5dc6d10e7f05f3 238 Gene3D G3DSA:3.40.50.2300 2 130 1.1E-36 T 21-04-2016 VFU_RS14070 642f5f7dcceaa7a01c5dc6d10e7f05f3 238 SUPERFAMILY SSF52172 2 128 4.13E-36 T 21-04-2016 IPR011006 CheY-like superfamily VFU_RS14070 642f5f7dcceaa7a01c5dc6d10e7f05f3 238 SMART SM00862 156 232 2.4E-14 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VFU_RS14070 642f5f7dcceaa7a01c5dc6d10e7f05f3 238 Gene3D G3DSA:1.10.10.10 134 233 3.1E-24 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS06200 edf447a421156547335d21b05850d749 577 SMART SM00836 461 577 1.5E-41 T 21-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 VFU_RS06200 edf447a421156547335d21b05850d749 577 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 577 28.223 T 21-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VFU_RS06200 edf447a421156547335d21b05850d749 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 304 325 3.6E-25 T 21-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VFU_RS06200 edf447a421156547335d21b05850d749 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 3.6E-25 T 21-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VFU_RS06200 edf447a421156547335d21b05850d749 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 3.6E-25 T 21-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VFU_RS06200 edf447a421156547335d21b05850d749 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 3.6E-25 T 21-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VFU_RS06200 edf447a421156547335d21b05850d749 577 PANTHER PTHR11956 1 577 6.8E-268 T 21-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VFU_RS06200 edf447a421156547335d21b05850d749 577 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 1.9E-20 T 21-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VFU_RS06200 edf447a421156547335d21b05850d749 577 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 577 8.7E-200 T 21-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VFU_RS06200 edf447a421156547335d21b05850d749 577 SUPERFAMILY SSF47323 455 577 3.47E-35 T 21-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VFU_RS06200 edf447a421156547335d21b05850d749 577 PANTHER PTHR11956:SF1 1 577 6.8E-268 T 21-04-2016 VFU_RS06200 edf447a421156547335d21b05850d749 577 Pfam PF00750 tRNA synthetases class I (R) 98 447 4.2E-161 T 21-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VFU_RS06200 edf447a421156547335d21b05850d749 577 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 21-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VFU_RS06200 edf447a421156547335d21b05850d749 577 Gene3D G3DSA:1.10.730.10 455 577 6.2E-38 T 21-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VFU_RS06200 edf447a421156547335d21b05850d749 577 Pfam PF05746 DALR anticodon binding domain 461 577 5.0E-36 T 21-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 VFU_RS06200 edf447a421156547335d21b05850d749 577 SUPERFAMILY SSF52374 111 455 8.28E-96 T 21-04-2016 VFU_RS06200 edf447a421156547335d21b05850d749 577 SUPERFAMILY SSF55190 2 101 3.27E-22 T 21-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VFU_RS06200 edf447a421156547335d21b05850d749 577 Gene3D G3DSA:3.30.1360.70 2 105 3.2E-34 T 21-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VFU_RS06200 edf447a421156547335d21b05850d749 577 Gene3D G3DSA:3.40.50.620 110 454 6.9E-115 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VFU_RS06200 edf447a421156547335d21b05850d749 577 SMART SM01016 5 87 7.6E-29 T 21-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VFU_RS10800 dc7eb1366d76e3101814966e1fc994b4 480 Gene3D G3DSA:2.30.40.10 400 466 1.8E-10 T 21-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VFU_RS10800 dc7eb1366d76e3101814966e1fc994b4 480 Pfam PF07969 Amidohydrolase family 45 460 1.7E-41 T 21-04-2016 IPR013108 Amidohydrolase 3 VFU_RS10800 dc7eb1366d76e3101814966e1fc994b4 480 PANTHER PTHR22935 339 478 2.0E-28 T 21-04-2016 VFU_RS10800 dc7eb1366d76e3101814966e1fc994b4 480 SUPERFAMILY SSF51556 57 415 1.12E-84 T 21-04-2016 IPR032466 Metal-dependent hydrolase VFU_RS10800 dc7eb1366d76e3101814966e1fc994b4 480 PANTHER PTHR22935:SF55 339 478 2.0E-28 T 21-04-2016 VFU_RS10800 dc7eb1366d76e3101814966e1fc994b4 480 Gene3D G3DSA:3.30.1490.130 284 339 3.3E-26 T 21-04-2016 IPR023100 D-aminoacylase, insert domain GO:0016811 VFU_RS10800 dc7eb1366d76e3101814966e1fc994b4 480 Gene3D G3DSA:3.20.20.140 70 281 3.9E-118 T 21-04-2016 VFU_RS10800 dc7eb1366d76e3101814966e1fc994b4 480 Gene3D G3DSA:3.20.20.140 340 399 3.9E-118 T 21-04-2016 VFU_RS10800 dc7eb1366d76e3101814966e1fc994b4 480 Gene3D G3DSA:2.30.40.10 3 69 3.4E-13 T 21-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VFU_RS10800 dc7eb1366d76e3101814966e1fc994b4 480 SUPERFAMILY SSF51338 3 56 4.65E-17 T 21-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VFU_RS10800 dc7eb1366d76e3101814966e1fc994b4 480 SUPERFAMILY SSF51338 415 469 4.65E-17 T 21-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VFU_RS11185 9993e0828c6c1d56c7b788bf5ae6fe37 647 Gene3D G3DSA:3.30.565.10 490 643 1.8E-33 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS11185 9993e0828c6c1d56c7b788bf5ae6fe37 647 SUPERFAMILY SSF47384 335 376 7.26E-7 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS11185 9993e0828c6c1d56c7b788bf5ae6fe37 647 PANTHER PTHR24423:SF497 317 368 2.6E-52 T 21-04-2016 VFU_RS11185 9993e0828c6c1d56c7b788bf5ae6fe37 647 SUPERFAMILY SSF55874 482 641 1.31E-33 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS11185 9993e0828c6c1d56c7b788bf5ae6fe37 647 PANTHER PTHR24423:SF497 73 96 2.6E-52 T 21-04-2016 VFU_RS11185 9993e0828c6c1d56c7b788bf5ae6fe37 647 Gene3D G3DSA:2.60.120.10 202 311 3.0E-18 T 21-04-2016 IPR014710 RmlC-like jelly roll fold VFU_RS11185 9993e0828c6c1d56c7b788bf5ae6fe37 647 SMART SM00387 530 643 2.0E-27 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS11185 9993e0828c6c1d56c7b788bf5ae6fe37 647 SUPERFAMILY SSF51206 202 312 3.67E-20 T 21-04-2016 IPR018490 Cyclic nucleotide-binding-like VFU_RS11185 9993e0828c6c1d56c7b788bf5ae6fe37 647 SUPERFAMILY SSF52172 4 138 4.64E-5 T 21-04-2016 IPR011006 CheY-like superfamily VFU_RS11185 9993e0828c6c1d56c7b788bf5ae6fe37 647 PANTHER PTHR24423 453 644 2.6E-52 T 21-04-2016 VFU_RS11185 9993e0828c6c1d56c7b788bf5ae6fe37 647 PANTHER PTHR24423 317 368 2.6E-52 T 21-04-2016 VFU_RS11185 9993e0828c6c1d56c7b788bf5ae6fe37 647 PRINTS PR00344 Bacterial sensor protein C-terminal signature 627 640 1.1E-7 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS11185 9993e0828c6c1d56c7b788bf5ae6fe37 647 PRINTS PR00344 Bacterial sensor protein C-terminal signature 603 621 1.1E-7 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS11185 9993e0828c6c1d56c7b788bf5ae6fe37 647 PRINTS PR00344 Bacterial sensor protein C-terminal signature 571 585 1.1E-7 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS11185 9993e0828c6c1d56c7b788bf5ae6fe37 647 Pfam PF00512 His Kinase A (phospho-acceptor) domain 340 380 4.2E-7 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS11185 9993e0828c6c1d56c7b788bf5ae6fe37 647 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 533 642 4.4E-21 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS11185 9993e0828c6c1d56c7b788bf5ae6fe37 647 PANTHER PTHR24423:SF497 453 644 2.6E-52 T 21-04-2016 VFU_RS11185 9993e0828c6c1d56c7b788bf5ae6fe37 647 Gene3D G3DSA:1.10.287.130 335 366 5.4E-5 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS11185 9993e0828c6c1d56c7b788bf5ae6fe37 647 Gene3D G3DSA:1.10.287.130 403 416 5.4E-5 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS11185 9993e0828c6c1d56c7b788bf5ae6fe37 647 Gene3D G3DSA:3.40.50.2300 6 126 3.0E-5 T 21-04-2016 VFU_RS11185 9993e0828c6c1d56c7b788bf5ae6fe37 647 Pfam PF00027 Cyclic nucleotide-binding domain 202 288 8.2E-17 T 21-04-2016 IPR000595 Cyclic nucleotide-binding domain VFU_RS11185 9993e0828c6c1d56c7b788bf5ae6fe37 647 PANTHER PTHR24423 73 96 2.6E-52 T 21-04-2016 VFU_RS07470 a09f467f254a63760bbbebc1fd26de23 395 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 244 343 1.5E-25 T 21-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal VFU_RS07470 a09f467f254a63760bbbebc1fd26de23 395 SUPERFAMILY SSF53901 211 391 6.81E-45 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VFU_RS07470 a09f467f254a63760bbbebc1fd26de23 395 SMART SM00825 Beta-ketoacyl synthase 20 338 2.9E-9 T 21-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VFU_RS07470 a09f467f254a63760bbbebc1fd26de23 395 Gene3D G3DSA:3.40.47.10 249 392 2.3E-47 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VFU_RS07470 a09f467f254a63760bbbebc1fd26de23 395 Gene3D G3DSA:3.40.47.10 54 237 4.6E-32 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VFU_RS07470 a09f467f254a63760bbbebc1fd26de23 395 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 61 237 7.8E-21 T 21-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal VFU_RS07470 a09f467f254a63760bbbebc1fd26de23 395 SUPERFAMILY SSF53901 8 237 9.69E-40 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VFU_RS07470 a09f467f254a63760bbbebc1fd26de23 395 PANTHER PTHR11712 147 390 1.5E-54 T 21-04-2016 VFU_RS07470 a09f467f254a63760bbbebc1fd26de23 395 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 21-04-2016 IPR018201 Beta-ketoacyl synthase, active site VFU_RS02095 54a8deb069721df7d67778b3766551e4 279 Pfam PF02311 AraC-like ligand binding domain 36 155 1.7E-20 T 21-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VFU_RS02095 54a8deb069721df7d67778b3766551e4 279 SUPERFAMILY SSF51215 6 162 6.54E-31 T 21-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VFU_RS02095 54a8deb069721df7d67778b3766551e4 279 SUPERFAMILY SSF46689 175 225 7.7E-9 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS02095 54a8deb069721df7d67778b3766551e4 279 PANTHER PTHR11019 5 279 1.5E-83 T 21-04-2016 VFU_RS02095 54a8deb069721df7d67778b3766551e4 279 Pfam PF12833 Helix-turn-helix domain 198 276 8.5E-18 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VFU_RS02095 54a8deb069721df7d67778b3766551e4 279 SMART SM00342 192 275 3.3E-29 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VFU_RS02095 54a8deb069721df7d67778b3766551e4 279 Gene3D G3DSA:1.10.10.60 229 277 5.0E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS02095 54a8deb069721df7d67778b3766551e4 279 Gene3D G3DSA:1.10.10.60 172 228 1.9E-14 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS02095 54a8deb069721df7d67778b3766551e4 279 Gene3D G3DSA:2.60.120.280 7 166 2.8E-36 T 21-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VFU_RS02095 54a8deb069721df7d67778b3766551e4 279 PANTHER PTHR11019:SF123 5 279 1.5E-83 T 21-04-2016 VFU_RS02095 54a8deb069721df7d67778b3766551e4 279 SUPERFAMILY SSF46689 229 278 1.3E-12 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS02095 54a8deb069721df7d67778b3766551e4 279 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 259 275 5.1E-5 T 21-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VFU_RS02095 54a8deb069721df7d67778b3766551e4 279 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 244 259 5.1E-5 T 21-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VFU_RS01330 ee5f63b796f0f54cf60fbd0300d82bee 202 PANTHER PTHR30055:SF82 6 199 1.8E-62 T 21-04-2016 VFU_RS01330 ee5f63b796f0f54cf60fbd0300d82bee 202 PANTHER PTHR30055 6 199 1.8E-62 T 21-04-2016 VFU_RS01330 ee5f63b796f0f54cf60fbd0300d82bee 202 Pfam PF16295 Tetracycline repressor, C-terminal all-alpha domain 74 199 8.1E-9 T 21-04-2016 IPR032551 HTH-type transcriptional repressor, C-terminal VFU_RS01330 ee5f63b796f0f54cf60fbd0300d82bee 202 ProSitePatterns PS01081 TetR-type HTH domain signature. 34 65 - T 21-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VFU_RS01330 ee5f63b796f0f54cf60fbd0300d82bee 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 8.4E-9 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VFU_RS01330 ee5f63b796f0f54cf60fbd0300d82bee 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 8.4E-9 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VFU_RS01330 ee5f63b796f0f54cf60fbd0300d82bee 202 SUPERFAMILY SSF46689 16 92 4.69E-17 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS01330 ee5f63b796f0f54cf60fbd0300d82bee 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 68 3.4E-14 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VFU_RS01330 ee5f63b796f0f54cf60fbd0300d82bee 202 Gene3D G3DSA:1.10.357.10 16 200 2.9E-32 T 21-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 VFU_RS04915 af6d5c0b9bc455464c8b3972c72eff6c 393 PIRSF PIRSF001500 1 383 1.4E-141 T 21-04-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 VFU_RS04915 af6d5c0b9bc455464c8b3972c72eff6c 393 Pfam PF01817 Chorismate mutase type II 12 91 1.1E-16 T 21-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 VFU_RS04915 af6d5c0b9bc455464c8b3972c72eff6c 393 Gene3D G3DSA:1.20.59.10 4 109 2.8E-42 T 21-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 VFU_RS04915 af6d5c0b9bc455464c8b3972c72eff6c 393 SUPERFAMILY SSF53850 108 293 2.17E-55 T 21-04-2016 VFU_RS04915 af6d5c0b9bc455464c8b3972c72eff6c 393 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 264 286 - T 21-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 VFU_RS04915 af6d5c0b9bc455464c8b3972c72eff6c 393 SMART SM00830 12 93 2.5E-22 T 21-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 VFU_RS04915 af6d5c0b9bc455464c8b3972c72eff6c 393 SUPERFAMILY SSF48600 7 95 4.21E-19 T 21-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 VFU_RS04915 af6d5c0b9bc455464c8b3972c72eff6c 393 SUPERFAMILY SSF55021 283 380 8.39E-25 T 21-04-2016 VFU_RS04915 af6d5c0b9bc455464c8b3972c72eff6c 393 Gene3D G3DSA:3.40.190.10 110 196 7.6E-32 T 21-04-2016 VFU_RS04915 af6d5c0b9bc455464c8b3972c72eff6c 393 Gene3D G3DSA:3.30.70.260 298 381 5.1E-27 T 21-04-2016 VFU_RS04915 af6d5c0b9bc455464c8b3972c72eff6c 393 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 9 91 3.3E-28 T 21-04-2016 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00121 VFU_RS04915 af6d5c0b9bc455464c8b3972c72eff6c 393 PANTHER PTHR21022:SF0 1 382 2.1E-155 T 21-04-2016 VFU_RS04915 af6d5c0b9bc455464c8b3972c72eff6c 393 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 328 335 - T 21-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 VFU_RS04915 af6d5c0b9bc455464c8b3972c72eff6c 393 PANTHER PTHR21022 1 382 2.1E-155 T 21-04-2016 VFU_RS04915 af6d5c0b9bc455464c8b3972c72eff6c 393 Pfam PF00800 Prephenate dehydratase 109 290 9.4E-59 T 21-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 VFU_RS04915 af6d5c0b9bc455464c8b3972c72eff6c 393 Gene3D G3DSA:3.40.190.10 197 276 1.9E-25 T 21-04-2016 VFU_RS05060 2b05f84db3ad852ada619a546c3f8255 255 PANTHER PTHR37838 1 255 1.4E-103 T 21-04-2016 VFU_RS05060 2b05f84db3ad852ada619a546c3f8255 255 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 5 248 1.6E-93 T 21-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 VFU_RS05060 2b05f84db3ad852ada619a546c3f8255 255 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 6 252 35.659 T 21-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 VFU_RS05060 2b05f84db3ad852ada619a546c3f8255 255 SMART SM00900 142 240 4.9E-32 T 21-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 VFU_RS05060 2b05f84db3ad852ada619a546c3f8255 255 PANTHER PTHR37838:SF1 1 255 1.4E-103 T 21-04-2016 VFU_RS05060 2b05f84db3ad852ada619a546c3f8255 255 Pfam PF04205 FMN-binding domain 142 237 3.8E-16 T 21-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 VFU_RS05060 2b05f84db3ad852ada619a546c3f8255 255 PIRSF PIRSF009437 1 255 5.0E-103 T 21-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 VFU_RS04295 f07120eb46aeba9d2ec9d63a43c41028 173 PIRSF PIRSF038996 1 172 4.0E-55 T 21-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 VFU_RS04295 f07120eb46aeba9d2ec9d63a43c41028 173 TIGRFAM TIGR01752 flav_long: flavodoxin 2 168 7.0E-65 T 21-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 VFU_RS04295 f07120eb46aeba9d2ec9d63a43c41028 173 PANTHER PTHR19384 142 168 7.7E-83 T 21-04-2016 VFU_RS04295 f07120eb46aeba9d2ec9d63a43c41028 173 PANTHER PTHR19384 1 119 7.7E-83 T 21-04-2016 VFU_RS04295 f07120eb46aeba9d2ec9d63a43c41028 173 PANTHER PTHR19384:SF73 142 168 7.7E-83 T 21-04-2016 VFU_RS04295 f07120eb46aeba9d2ec9d63a43c41028 173 PANTHER PTHR19384:SF73 1 119 7.7E-83 T 21-04-2016 VFU_RS04295 f07120eb46aeba9d2ec9d63a43c41028 173 SUPERFAMILY SSF52218 1 166 2.27E-45 T 21-04-2016 IPR029039 Flavoprotein-like domain VFU_RS04295 f07120eb46aeba9d2ec9d63a43c41028 173 Gene3D G3DSA:3.40.50.360 1 166 1.2E-54 T 21-04-2016 IPR029039 Flavoprotein-like domain VFU_RS04295 f07120eb46aeba9d2ec9d63a43c41028 173 Pfam PF00258 Flavodoxin 5 161 5.3E-25 T 21-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VFU_RS00720 452d9b92652a5dffa71ff960a995e0dd 252 Pfam PF06251 Capsule biosynthesis GfcC 22 244 8.1E-50 T 21-04-2016 IPR010425 Domain of unknown function DUF1017 VFU_RS03350 f5724fdc5ebb2c09b2d171a9ad2e7275 130 PANTHER PTHR11758 1 130 4.1E-57 T 21-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 VFU_RS03350 f5724fdc5ebb2c09b2d171a9ad2e7275 130 Gene3D G3DSA:3.30.1490.10 74 129 1.4E-27 T 21-04-2016 VFU_RS03350 f5724fdc5ebb2c09b2d171a9ad2e7275 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 21-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 VFU_RS03350 f5724fdc5ebb2c09b2d171a9ad2e7275 130 SUPERFAMILY SSF56047 2 129 1.31E-43 T 21-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 VFU_RS03350 f5724fdc5ebb2c09b2d171a9ad2e7275 130 Pfam PF00410 Ribosomal protein S8 5 129 5.6E-47 T 21-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 VFU_RS03350 f5724fdc5ebb2c09b2d171a9ad2e7275 130 Gene3D G3DSA:3.30.1370.30 2 71 2.9E-25 T 21-04-2016 VFU_RS03350 f5724fdc5ebb2c09b2d171a9ad2e7275 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 30.746 T 21-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 VFU_RS13340 7badf3c7c9bc7dc75d978cf9349e0c78 249 Gene3D G3DSA:2.60.40.360 23 149 1.6E-35 T 21-04-2016 IPR008962 PapD-like VFU_RS13340 7badf3c7c9bc7dc75d978cf9349e0c78 249 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 175 230 4.5E-9 T 21-04-2016 IPR016148 Pili assembly chaperone, C-terminal VFU_RS13340 7badf3c7c9bc7dc75d978cf9349e0c78 249 PANTHER PTHR30251 10 240 3.0E-50 T 21-04-2016 VFU_RS13340 7badf3c7c9bc7dc75d978cf9349e0c78 249 SUPERFAMILY SSF49354 18 149 2.54E-31 T 21-04-2016 IPR008962 PapD-like VFU_RS13340 7badf3c7c9bc7dc75d978cf9349e0c78 249 SUPERFAMILY SSF49584 166 243 5.76E-15 T 21-04-2016 IPR016148 Pili assembly chaperone, C-terminal VFU_RS13340 7badf3c7c9bc7dc75d978cf9349e0c78 249 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 23 149 7.1E-33 T 21-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 VFU_RS13340 7badf3c7c9bc7dc75d978cf9349e0c78 249 PRINTS PR00969 Pili chaperone signature 98 115 4.9E-27 T 21-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 VFU_RS13340 7badf3c7c9bc7dc75d978cf9349e0c78 249 PRINTS PR00969 Pili chaperone signature 169 184 4.9E-27 T 21-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 VFU_RS13340 7badf3c7c9bc7dc75d978cf9349e0c78 249 PRINTS PR00969 Pili chaperone signature 68 89 4.9E-27 T 21-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 VFU_RS13340 7badf3c7c9bc7dc75d978cf9349e0c78 249 PRINTS PR00969 Pili chaperone signature 23 32 4.9E-27 T 21-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 VFU_RS13340 7badf3c7c9bc7dc75d978cf9349e0c78 249 PRINTS PR00969 Pili chaperone signature 131 146 4.9E-27 T 21-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 VFU_RS13340 7badf3c7c9bc7dc75d978cf9349e0c78 249 PANTHER PTHR30251:SF5 10 240 3.0E-50 T 21-04-2016 VFU_RS13340 7badf3c7c9bc7dc75d978cf9349e0c78 249 Gene3D G3DSA:2.60.40.1070 164 243 3.8E-17 T 21-04-2016 IPR016148 Pili assembly chaperone, C-terminal VFU_RS01960 2a8fffcdae9b5631c8fa13db110939ac 573 TIGRFAM TIGR01810 betA: choline dehydrogenase 6 536 6.3E-241 T 21-04-2016 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 VFU_RS01960 2a8fffcdae9b5631c8fa13db110939ac 573 SUPERFAMILY SSF51905 473 534 1.58E-88 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS01960 2a8fffcdae9b5631c8fa13db110939ac 573 SUPERFAMILY SSF51905 1 290 1.58E-88 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS01960 2a8fffcdae9b5631c8fa13db110939ac 573 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 3 553 60.563 T 21-04-2016 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 VFU_RS01960 2a8fffcdae9b5631c8fa13db110939ac 573 Gene3D G3DSA:3.50.50.60 467 532 5.0E-123 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS01960 2a8fffcdae9b5631c8fa13db110939ac 573 Gene3D G3DSA:3.50.50.60 189 315 5.0E-123 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS01960 2a8fffcdae9b5631c8fa13db110939ac 573 Gene3D G3DSA:3.50.50.60 2 126 5.0E-123 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS01960 2a8fffcdae9b5631c8fa13db110939ac 573 Pfam PF05199 GMC oxidoreductase 388 526 4.3E-40 T 21-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 VFU_RS01960 2a8fffcdae9b5631c8fa13db110939ac 573 PANTHER PTHR11552:SF51 1 552 9.3E-242 T 21-04-2016 VFU_RS01960 2a8fffcdae9b5631c8fa13db110939ac 573 PANTHER PTHR11552 1 552 9.3E-242 T 21-04-2016 VFU_RS01960 2a8fffcdae9b5631c8fa13db110939ac 573 SUPERFAMILY SSF54373 292 474 2.55E-61 T 21-04-2016 VFU_RS01960 2a8fffcdae9b5631c8fa13db110939ac 573 Pfam PF00732 GMC oxidoreductase 5 297 1.5E-91 T 21-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 VFU_RS01960 2a8fffcdae9b5631c8fa13db110939ac 573 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 82 105 - T 21-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 VFU_RS01960 2a8fffcdae9b5631c8fa13db110939ac 573 PIRSF PIRSF000137 1 537 6.5E-145 T 21-04-2016 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 VFU_RS01960 2a8fffcdae9b5631c8fa13db110939ac 573 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 256 270 - T 21-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 VFU_RS13705 da358298f134590a2e7e2426108a5e01 192 SMART SM00464 3 189 6.3E-4 T 21-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 VFU_RS13705 da358298f134590a2e7e2426108a5e01 192 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 3 134 1.1E-15 T 21-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 VFU_RS13705 da358298f134590a2e7e2426108a5e01 192 SUPERFAMILY SSF88697 3 188 1.17E-46 T 21-04-2016 IPR015947 PUA-like domain VFU_RS11800 320e8a3803b0ba6d9d556c7e9da4c065 602 SMART SM00388 373 441 1.0E-10 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS11800 320e8a3803b0ba6d9d556c7e9da4c065 602 SUPERFAMILY SSF47384 357 440 1.35E-12 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS11800 320e8a3803b0ba6d9d556c7e9da4c065 602 PANTHER PTHR24423:SF451 350 598 7.3E-152 T 21-04-2016 VFU_RS11800 320e8a3803b0ba6d9d556c7e9da4c065 602 PANTHER PTHR24423:SF451 81 179 7.3E-152 T 21-04-2016 VFU_RS11800 320e8a3803b0ba6d9d556c7e9da4c065 602 Gene3D G3DSA:3.30.565.10 446 589 2.3E-36 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS11800 320e8a3803b0ba6d9d556c7e9da4c065 602 PANTHER PTHR24423 350 598 7.3E-152 T 21-04-2016 VFU_RS11800 320e8a3803b0ba6d9d556c7e9da4c065 602 PANTHER PTHR24423 81 179 7.3E-152 T 21-04-2016 VFU_RS11800 320e8a3803b0ba6d9d556c7e9da4c065 602 SUPERFAMILY SSF103190 50 187 1.96E-29 T 21-04-2016 IPR029151 Periplasmic sensor domain-like VFU_RS11800 320e8a3803b0ba6d9d556c7e9da4c065 602 Gene3D G3DSA:3.30.450.20 113 140 1.0E-5 T 21-04-2016 VFU_RS11800 320e8a3803b0ba6d9d556c7e9da4c065 602 Gene3D G3DSA:1.10.287.130 372 437 2.2E-8 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS11800 320e8a3803b0ba6d9d556c7e9da4c065 602 Pfam PF00512 His Kinase A (phospho-acceptor) domain 374 439 4.2E-12 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS11800 320e8a3803b0ba6d9d556c7e9da4c065 602 SMART SM00387 484 592 4.3E-29 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS11800 320e8a3803b0ba6d9d556c7e9da4c065 602 PRINTS PR00344 Bacterial sensor protein C-terminal signature 576 589 1.4E-15 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS11800 320e8a3803b0ba6d9d556c7e9da4c065 602 PRINTS PR00344 Bacterial sensor protein C-terminal signature 541 551 1.4E-15 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS11800 320e8a3803b0ba6d9d556c7e9da4c065 602 PRINTS PR00344 Bacterial sensor protein C-terminal signature 552 570 1.4E-15 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS11800 320e8a3803b0ba6d9d556c7e9da4c065 602 PRINTS PR00344 Bacterial sensor protein C-terminal signature 523 537 1.4E-15 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS11800 320e8a3803b0ba6d9d556c7e9da4c065 602 PIRSF PIRSF036431 1 599 1.1E-187 T 21-04-2016 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) VFU_RS11800 320e8a3803b0ba6d9d556c7e9da4c065 602 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 486 590 6.7E-21 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS11800 320e8a3803b0ba6d9d556c7e9da4c065 602 SUPERFAMILY SSF55874 441 594 5.5E-36 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS04030 da01808429519f68e79c199c2c401605 191 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 25 176 1.4E-12 T 21-04-2016 IPR011978 Uncharacterised protein family UPF0149 VFU_RS04030 da01808429519f68e79c199c2c401605 191 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 5 189 33.22 T 21-04-2016 IPR011978 Uncharacterised protein family UPF0149 VFU_RS04030 da01808429519f68e79c199c2c401605 191 Pfam PF03695 Uncharacterised protein family (UPF0149) 12 179 9.3E-38 T 21-04-2016 IPR011978 Uncharacterised protein family UPF0149 VFU_RS04030 da01808429519f68e79c199c2c401605 191 PANTHER PTHR37528 1 191 3.8E-43 T 21-04-2016 VFU_RS04030 da01808429519f68e79c199c2c401605 191 SUPERFAMILY SSF101327 7 178 8.89E-43 T 21-04-2016 IPR011978 Uncharacterised protein family UPF0149 VFU_RS12725 6a901cc0b771c561d6f8b6d2a6b13af2 304 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 225 8.7E-23 T 21-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 VFU_RS12725 6a901cc0b771c561d6f8b6d2a6b13af2 304 PANTHER PTHR11092 1 304 2.0E-137 T 21-04-2016 IPR010099 Epimerase family protein SDR39U1 VFU_RS12725 6a901cc0b771c561d6f8b6d2a6b13af2 304 Gene3D G3DSA:3.90.25.10 202 291 2.9E-7 T 21-04-2016 VFU_RS12725 6a901cc0b771c561d6f8b6d2a6b13af2 304 PANTHER PTHR11092:SF0 1 304 2.0E-137 T 21-04-2016 VFU_RS12725 6a901cc0b771c561d6f8b6d2a6b13af2 304 SUPERFAMILY SSF51735 1 301 4.14E-42 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS12725 6a901cc0b771c561d6f8b6d2a6b13af2 304 Pfam PF08338 Domain of unknown function (DUF1731) 253 299 2.3E-16 T 21-04-2016 IPR013549 Domain of unknown function DUF1731 VFU_RS12725 6a901cc0b771c561d6f8b6d2a6b13af2 304 Gene3D G3DSA:3.40.50.720 1 201 1.1E-22 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS12725 6a901cc0b771c561d6f8b6d2a6b13af2 304 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 296 2.4E-102 T 21-04-2016 IPR010099 Epimerase family protein SDR39U1 VFU_RS12785 4733d1d10e905c678d574652c6e8b25d 322 SUPERFAMILY SSF53686 3 313 2.36E-97 T 21-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VFU_RS12785 4733d1d10e905c678d574652c6e8b25d 322 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 311 2.2E-143 T 21-04-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 VFU_RS12785 4733d1d10e905c678d574652c6e8b25d 322 PANTHER PTHR10314:SF110 3 322 7.0E-162 T 21-04-2016 VFU_RS12785 4733d1d10e905c678d574652c6e8b25d 322 Gene3D G3DSA:3.40.50.1100 36 132 2.4E-38 T 21-04-2016 VFU_RS12785 4733d1d10e905c678d574652c6e8b25d 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 299 2.9E-68 T 21-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VFU_RS12785 4733d1d10e905c678d574652c6e8b25d 322 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 21-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 VFU_RS12785 4733d1d10e905c678d574652c6e8b25d 322 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 311 9.0E-136 T 21-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 VFU_RS12785 4733d1d10e905c678d574652c6e8b25d 322 PANTHER PTHR10314 3 322 7.0E-162 T 21-04-2016 VFU_RS12785 4733d1d10e905c678d574652c6e8b25d 322 Gene3D G3DSA:3.40.50.1100 133 312 3.1E-74 T 21-04-2016 VFU_RS07935 0c6b997dda6b2212ce950318f282dbe0 405 Gene3D G3DSA:3.90.550.10 6 282 3.5E-74 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VFU_RS07935 0c6b997dda6b2212ce950318f282dbe0 405 Gene3D G3DSA:3.90.550.10 324 367 3.5E-74 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VFU_RS07935 0c6b997dda6b2212ce950318f282dbe0 405 PANTHER PTHR22572:SF10 5 378 6.2E-158 T 21-04-2016 VFU_RS07935 0c6b997dda6b2212ce950318f282dbe0 405 PANTHER PTHR22572 5 378 6.2E-158 T 21-04-2016 VFU_RS07935 0c6b997dda6b2212ce950318f282dbe0 405 SUPERFAMILY SSF51161 293 402 3.19E-20 T 21-04-2016 IPR011004 Trimeric LpxA-like VFU_RS07935 0c6b997dda6b2212ce950318f282dbe0 405 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 193 203 - T 21-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 VFU_RS07935 0c6b997dda6b2212ce950318f282dbe0 405 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 4 377 5.8E-150 T 21-04-2016 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 VFU_RS07935 0c6b997dda6b2212ce950318f282dbe0 405 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 21-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 VFU_RS07935 0c6b997dda6b2212ce950318f282dbe0 405 Pfam PF00483 Nucleotidyl transferase 6 273 5.5E-63 T 21-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 VFU_RS07935 0c6b997dda6b2212ce950318f282dbe0 405 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 95 103 - T 21-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 VFU_RS07935 0c6b997dda6b2212ce950318f282dbe0 405 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 403 48.766 T 21-04-2016 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 VFU_RS07935 0c6b997dda6b2212ce950318f282dbe0 405 SUPERFAMILY SSF53448 4 275 3.99E-69 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VFU_RS07935 0c6b997dda6b2212ce950318f282dbe0 405 SUPERFAMILY SSF53448 341 357 3.99E-69 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VFU_RS11950 c944b225030313240071a54a2dc1342d 286 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 21-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VFU_RS11950 c944b225030313240071a54a2dc1342d 286 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 4.8E-67 T 21-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VFU_RS11950 c944b225030313240071a54a2dc1342d 286 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 37.57 T 21-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VFU_RS11950 c944b225030313240071a54a2dc1342d 286 SUPERFAMILY SSF53223 1 122 3.55E-39 T 21-04-2016 VFU_RS11950 c944b225030313240071a54a2dc1342d 286 Gene3D G3DSA:3.40.50.720 141 264 8.7E-51 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS11950 c944b225030313240071a54a2dc1342d 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 1.5E-87 T 21-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VFU_RS11950 c944b225030313240071a54a2dc1342d 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 1.5E-87 T 21-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VFU_RS11950 c944b225030313240071a54a2dc1342d 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 1.5E-87 T 21-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VFU_RS11950 c944b225030313240071a54a2dc1342d 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 1.5E-87 T 21-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VFU_RS11950 c944b225030313240071a54a2dc1342d 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 1.5E-87 T 21-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VFU_RS11950 c944b225030313240071a54a2dc1342d 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 1.5E-87 T 21-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VFU_RS11950 c944b225030313240071a54a2dc1342d 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 1.5E-87 T 21-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VFU_RS11950 c944b225030313240071a54a2dc1342d 286 PANTHER PTHR10025 1 283 8.1E-171 T 21-04-2016 VFU_RS11950 c944b225030313240071a54a2dc1342d 286 SUPERFAMILY SSF51735 123 280 2.93E-50 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS11950 c944b225030313240071a54a2dc1342d 286 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 21-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VFU_RS11950 c944b225030313240071a54a2dc1342d 286 Gene3D G3DSA:3.40.192.10 7 140 2.2E-49 T 21-04-2016 VFU_RS11950 c944b225030313240071a54a2dc1342d 286 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 121 2.9E-38 T 21-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VFU_RS12695 36ed2ba0aaf2135879944b22b82402e0 91 SUPERFAMILY SSF52833 5 87 4.92E-29 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS12695 36ed2ba0aaf2135879944b22b82402e0 91 Gene3D G3DSA:3.40.30.10 2 91 2.9E-43 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS12695 36ed2ba0aaf2135879944b22b82402e0 91 Pfam PF10262 Rdx family 6 78 1.3E-31 T 21-04-2016 IPR011893 Selenoprotein, Rdx type VFU_RS12695 36ed2ba0aaf2135879944b22b82402e0 91 PANTHER PTHR36417:SF1 1 91 1.4E-56 T 21-04-2016 VFU_RS12695 36ed2ba0aaf2135879944b22b82402e0 91 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 6 78 2.4E-23 T 21-04-2016 IPR011893 Selenoprotein, Rdx type VFU_RS12695 36ed2ba0aaf2135879944b22b82402e0 91 PANTHER PTHR36417 1 91 1.4E-56 T 21-04-2016 VFU_RS04130 5f804834e84fea39b373311d9b6fa6a7 933 SUPERFAMILY SSF47226 762 775 7.98E-21 T 21-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VFU_RS04130 5f804834e84fea39b373311d9b6fa6a7 933 SUPERFAMILY SSF47226 817 920 7.98E-21 T 21-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VFU_RS04130 5f804834e84fea39b373311d9b6fa6a7 933 SUPERFAMILY SSF52172 532 645 1.04E-8 T 21-04-2016 IPR011006 CheY-like superfamily VFU_RS04130 5f804834e84fea39b373311d9b6fa6a7 933 SUPERFAMILY SSF55874 343 517 2.49E-44 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS04130 5f804834e84fea39b373311d9b6fa6a7 933 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 401 515 1.8E-28 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS04130 5f804834e84fea39b373311d9b6fa6a7 933 Gene3D G3DSA:3.30.565.10 355 519 9.0E-45 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS04130 5f804834e84fea39b373311d9b6fa6a7 933 SUPERFAMILY SSF158472 199 246 1.44E-6 T 21-04-2016 VFU_RS04130 5f804834e84fea39b373311d9b6fa6a7 933 Gene3D G3DSA:3.40.50.2300 529 645 6.0E-4 T 21-04-2016 VFU_RS04130 5f804834e84fea39b373311d9b6fa6a7 933 SUPERFAMILY SSF47384 274 355 1.51E-22 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS04130 5f804834e84fea39b373311d9b6fa6a7 933 SUPERFAMILY SSF52172 665 783 1.85E-36 T 21-04-2016 IPR011006 CheY-like superfamily VFU_RS04130 5f804834e84fea39b373311d9b6fa6a7 933 Pfam PF00072 Response regulator receiver domain 668 777 5.9E-29 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS04130 5f804834e84fea39b373311d9b6fa6a7 933 SMART SM00387 401 517 2.7E-38 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS04130 5f804834e84fea39b373311d9b6fa6a7 933 Gene3D G3DSA:1.20.120.160 829 930 7.5E-18 T 21-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VFU_RS04130 5f804834e84fea39b373311d9b6fa6a7 933 SMART SM00448 666 779 6.1E-36 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS04130 5f804834e84fea39b373311d9b6fa6a7 933 SMART SM00304 197 249 5.3E-6 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS04130 5f804834e84fea39b373311d9b6fa6a7 933 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 31 174 9.2E-51 T 21-04-2016 IPR019247 Histidine kinase BarA, N-terminal VFU_RS04130 5f804834e84fea39b373311d9b6fa6a7 933 Gene3D G3DSA:3.40.50.2300 665 783 6.7E-39 T 21-04-2016 VFU_RS04130 5f804834e84fea39b373311d9b6fa6a7 933 Gene3D G3DSA:1.10.287.130 281 350 1.6E-19 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS04130 5f804834e84fea39b373311d9b6fa6a7 933 SMART SM00388 289 354 2.5E-24 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS04130 5f804834e84fea39b373311d9b6fa6a7 933 Pfam PF00672 HAMP domain 179 245 2.8E-10 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS04130 5f804834e84fea39b373311d9b6fa6a7 933 Pfam PF01627 Hpt domain 837 921 1.0E-11 T 21-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VFU_RS04130 5f804834e84fea39b373311d9b6fa6a7 933 PANTHER PTHR24423:SF540 268 520 2.0E-186 T 21-04-2016 VFU_RS04130 5f804834e84fea39b373311d9b6fa6a7 933 PANTHER PTHR24423:SF540 6 20 2.0E-186 T 21-04-2016 VFU_RS04130 5f804834e84fea39b373311d9b6fa6a7 933 PANTHER PTHR24423:SF540 191 229 2.0E-186 T 21-04-2016 VFU_RS04130 5f804834e84fea39b373311d9b6fa6a7 933 PANTHER PTHR24423:SF540 583 831 2.0E-186 T 21-04-2016 VFU_RS04130 5f804834e84fea39b373311d9b6fa6a7 933 Pfam PF00512 His Kinase A (phospho-acceptor) domain 290 354 1.5E-20 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS04130 5f804834e84fea39b373311d9b6fa6a7 933 SMART SM00073 827 925 7.1E-6 T 21-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VFU_RS04130 5f804834e84fea39b373311d9b6fa6a7 933 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 495 1.1E-12 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS04130 5f804834e84fea39b373311d9b6fa6a7 933 PRINTS PR00344 Bacterial sensor protein C-terminal signature 501 514 1.1E-12 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS04130 5f804834e84fea39b373311d9b6fa6a7 933 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 456 1.1E-12 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS04130 5f804834e84fea39b373311d9b6fa6a7 933 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 470 1.1E-12 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS04130 5f804834e84fea39b373311d9b6fa6a7 933 PANTHER PTHR24423 268 520 2.0E-186 T 21-04-2016 VFU_RS04130 5f804834e84fea39b373311d9b6fa6a7 933 PANTHER PTHR24423 6 20 2.0E-186 T 21-04-2016 VFU_RS04130 5f804834e84fea39b373311d9b6fa6a7 933 PANTHER PTHR24423 191 229 2.0E-186 T 21-04-2016 VFU_RS04130 5f804834e84fea39b373311d9b6fa6a7 933 PANTHER PTHR24423 583 831 2.0E-186 T 21-04-2016 VFU_RS04075 88a02e285e4e40da5e1c0c0e54220af3 190 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 185 6.4E-33 T 21-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS04075 88a02e285e4e40da5e1c0c0e54220af3 190 PANTHER PTHR30173:SF1 1 187 2.3E-55 T 21-04-2016 VFU_RS04075 88a02e285e4e40da5e1c0c0e54220af3 190 Pfam PF08281 Sigma-70, region 4 130 181 3.4E-18 T 21-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS04075 88a02e285e4e40da5e1c0c0e54220af3 190 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 2 190 2.6E-102 T 21-04-2016 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS04075 88a02e285e4e40da5e1c0c0e54220af3 190 Gene3D G3DSA:1.10.1740.10 2 111 8.1E-39 T 21-04-2016 VFU_RS04075 88a02e285e4e40da5e1c0c0e54220af3 190 PANTHER PTHR30173 1 187 2.3E-55 T 21-04-2016 VFU_RS04075 88a02e285e4e40da5e1c0c0e54220af3 190 Gene3D G3DSA:1.10.10.10 125 188 8.1E-26 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS04075 88a02e285e4e40da5e1c0c0e54220af3 190 SUPERFAMILY SSF88659 124 186 1.68E-17 T 21-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS04075 88a02e285e4e40da5e1c0c0e54220af3 190 SUPERFAMILY SSF88946 2 108 2.51E-33 T 21-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS04075 88a02e285e4e40da5e1c0c0e54220af3 190 Pfam PF04542 Sigma-70 region 2 25 92 7.6E-19 T 21-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS10545 6dae76ed4c258fd902670cf47521d561 1012 Pfam PF01565 FAD binding domain 52 192 2.3E-34 T 21-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 VFU_RS10545 6dae76ed4c258fd902670cf47521d561 1012 Gene3D G3DSA:3.30.465.10 110 277 1.4E-40 T 21-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 VFU_RS10545 6dae76ed4c258fd902670cf47521d561 1012 Pfam PF13183 4Fe-4S dicluster domain 570 681 7.8E-12 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VFU_RS10545 6dae76ed4c258fd902670cf47521d561 1012 PANTHER PTHR11748 244 582 1.8E-174 T 21-04-2016 VFU_RS10545 6dae76ed4c258fd902670cf47521d561 1012 PANTHER PTHR11748 18 198 1.8E-174 T 21-04-2016 VFU_RS10545 6dae76ed4c258fd902670cf47521d561 1012 Pfam PF02913 FAD linked oxidases, C-terminal domain 276 534 1.1E-62 T 21-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 VFU_RS10545 6dae76ed4c258fd902670cf47521d561 1012 SUPERFAMILY SSF56176 18 192 1.17E-49 T 21-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 VFU_RS10545 6dae76ed4c258fd902670cf47521d561 1012 SUPERFAMILY SSF56176 235 277 1.17E-49 T 21-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 VFU_RS10545 6dae76ed4c258fd902670cf47521d561 1012 Gene3D G3DSA:3.30.43.10 7 109 4.2E-24 T 21-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 VFU_RS10545 6dae76ed4c258fd902670cf47521d561 1012 PANTHER PTHR11748:SF35 244 582 1.8E-174 T 21-04-2016 VFU_RS10545 6dae76ed4c258fd902670cf47521d561 1012 PANTHER PTHR11748:SF35 18 198 1.8E-174 T 21-04-2016 VFU_RS10545 6dae76ed4c258fd902670cf47521d561 1012 SUPERFAMILY SSF46548 517 617 9.94E-7 T 21-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 VFU_RS10545 6dae76ed4c258fd902670cf47521d561 1012 SUPERFAMILY SSF46548 647 685 9.94E-7 T 21-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 VFU_RS10545 6dae76ed4c258fd902670cf47521d561 1012 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 667 678 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VFU_RS10545 6dae76ed4c258fd902670cf47521d561 1012 Gene3D G3DSA:1.10.1060.10 646 696 3.2E-14 T 21-04-2016 VFU_RS10545 6dae76ed4c258fd902670cf47521d561 1012 Gene3D G3DSA:1.10.1060.10 511 614 3.2E-14 T 21-04-2016 VFU_RS10545 6dae76ed4c258fd902670cf47521d561 1012 SUPERFAMILY SSF55103 253 538 3.92E-54 T 21-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 VFU_RS20310 332c688273bb8b08663e2d780dc6b220 284 Pfam PF00970 Oxidoreductase FAD-binding domain 193 255 7.1E-9 T 21-04-2016 IPR008333 Oxidoreductase, FAD-binding domain VFU_RS20310 332c688273bb8b08663e2d780dc6b220 284 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 29 104 7.9E-11 T 21-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VFU_RS20310 332c688273bb8b08663e2d780dc6b220 284 PANTHER PTHR19370 51 165 1.5E-79 T 21-04-2016 VFU_RS20310 332c688273bb8b08663e2d780dc6b220 284 SUPERFAMILY SSF63380 94 261 2.51E-35 T 21-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 VFU_RS20310 332c688273bb8b08663e2d780dc6b220 284 SUPERFAMILY SSF54292 26 113 5.13E-21 T 21-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VFU_RS20310 332c688273bb8b08663e2d780dc6b220 284 PANTHER PTHR19370:SF32 51 165 1.5E-79 T 21-04-2016 VFU_RS20310 332c688273bb8b08663e2d780dc6b220 284 PANTHER PTHR19370 194 284 1.5E-79 T 21-04-2016 VFU_RS20310 332c688273bb8b08663e2d780dc6b220 284 Gene3D G3DSA:3.10.20.30 23 112 1.6E-20 T 21-04-2016 IPR012675 Beta-grasp domain VFU_RS20310 332c688273bb8b08663e2d780dc6b220 284 PANTHER PTHR19370:SF32 194 284 1.5E-79 T 21-04-2016 VFU_RS20310 332c688273bb8b08663e2d780dc6b220 284 Gene3D G3DSA:3.40.50.80 247 280 1.4E-7 T 21-04-2016 VFU_RS20310 332c688273bb8b08663e2d780dc6b220 284 SUPERFAMILY SSF52343 251 281 2.72E-5 T 21-04-2016 VFU_RS20310 332c688273bb8b08663e2d780dc6b220 284 Gene3D G3DSA:2.40.30.10 113 246 2.6E-61 T 21-04-2016 VFU_RS20310 332c688273bb8b08663e2d780dc6b220 284 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 1 284 4.0E-151 T 21-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 VFU_RS08905 fe5b942f5106954fd6ce8d82c5c5b33d 505 Gene3D G3DSA:1.20.1250.20 267 426 1.1E-17 T 21-04-2016 VFU_RS08905 fe5b942f5106954fd6ce8d82c5c5b33d 505 Gene3D G3DSA:1.20.1250.20 477 501 1.1E-17 T 21-04-2016 VFU_RS08905 fe5b942f5106954fd6ce8d82c5c5b33d 505 PANTHER PTHR23501:SF69 15 505 1.5E-186 T 21-04-2016 VFU_RS08905 fe5b942f5106954fd6ce8d82c5c5b33d 505 Gene3D G3DSA:1.20.1250.20 22 197 6.8E-34 T 21-04-2016 VFU_RS08905 fe5b942f5106954fd6ce8d82c5c5b33d 505 Pfam PF07690 Major Facilitator Superfamily 23 415 1.1E-54 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VFU_RS08905 fe5b942f5106954fd6ce8d82c5c5b33d 505 SUPERFAMILY SSF103473 13 202 1.03E-72 T 21-04-2016 IPR020846 Major facilitator superfamily domain VFU_RS08905 fe5b942f5106954fd6ce8d82c5c5b33d 505 SUPERFAMILY SSF103473 254 425 1.03E-72 T 21-04-2016 IPR020846 Major facilitator superfamily domain VFU_RS08905 fe5b942f5106954fd6ce8d82c5c5b33d 505 SUPERFAMILY SSF103473 476 503 1.03E-72 T 21-04-2016 IPR020846 Major facilitator superfamily domain VFU_RS08905 fe5b942f5106954fd6ce8d82c5c5b33d 505 PRINTS PR01036 Tetracycline resistance protein TetB signature 143 167 2.7E-5 T 21-04-2016 VFU_RS08905 fe5b942f5106954fd6ce8d82c5c5b33d 505 PRINTS PR01036 Tetracycline resistance protein TetB signature 22 46 2.7E-5 T 21-04-2016 VFU_RS08905 fe5b942f5106954fd6ce8d82c5c5b33d 505 PRINTS PR01036 Tetracycline resistance protein TetB signature 113 133 2.7E-5 T 21-04-2016 VFU_RS08905 fe5b942f5106954fd6ce8d82c5c5b33d 505 PRINTS PR01036 Tetracycline resistance protein TetB signature 268 293 2.7E-5 T 21-04-2016 VFU_RS08905 fe5b942f5106954fd6ce8d82c5c5b33d 505 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 19 493 1.6E-130 T 21-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 VFU_RS08905 fe5b942f5106954fd6ce8d82c5c5b33d 505 PANTHER PTHR23501 15 505 1.5E-186 T 21-04-2016 VFU_RS13595 9509ad2bde3c88c53105bae9e167675c 620 SUPERFAMILY SSF58104 309 618 1.57E-70 T 21-04-2016 VFU_RS13595 9509ad2bde3c88c53105bae9e167675c 620 PANTHER PTHR32089 219 620 3.0E-97 T 21-04-2016 VFU_RS13595 9509ad2bde3c88c53105bae9e167675c 620 PANTHER PTHR32089:SF64 219 620 3.0E-97 T 21-04-2016 VFU_RS13595 9509ad2bde3c88c53105bae9e167675c 620 Pfam PF00672 HAMP domain 270 332 7.8E-11 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS13595 9509ad2bde3c88c53105bae9e167675c 620 SMART SM00304 289 341 2.1E-4 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS13595 9509ad2bde3c88c53105bae9e167675c 620 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 421 616 1.6E-45 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VFU_RS13595 9509ad2bde3c88c53105bae9e167675c 620 SMART SM00283 356 617 5.1E-62 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VFU_RS13595 9509ad2bde3c88c53105bae9e167675c 620 SMART SM01358 25 260 9.0E-4 T 21-04-2016 IPR032255 Helical bimodular sensor domain VFU_RS13595 9509ad2bde3c88c53105bae9e167675c 620 Gene3D G3DSA:1.10.287.950 370 588 1.8E-53 T 21-04-2016 VFU_RS03710 a92a28f96a5fed72bd9cb74814239120 458 SUPERFAMILY SSF52540 247 439 1.63E-28 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS03710 a92a28f96a5fed72bd9cb74814239120 458 SUPERFAMILY SSF88723 104 155 4.51E-14 T 21-04-2016 IPR029060 PIN domain-like VFU_RS03710 a92a28f96a5fed72bd9cb74814239120 458 SUPERFAMILY SSF88723 7 68 4.51E-14 T 21-04-2016 IPR029060 PIN domain-like VFU_RS03710 a92a28f96a5fed72bd9cb74814239120 458 Gene3D G3DSA:3.40.50.300 246 456 2.7E-61 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS03710 a92a28f96a5fed72bd9cb74814239120 458 Gene3D G3DSA:3.40.50.1010 9 67 2.4E-16 T 21-04-2016 IPR029060 PIN domain-like VFU_RS03710 a92a28f96a5fed72bd9cb74814239120 458 Gene3D G3DSA:3.40.50.1010 104 151 2.4E-16 T 21-04-2016 IPR029060 PIN domain-like VFU_RS03710 a92a28f96a5fed72bd9cb74814239120 458 PANTHER PTHR30473 6 182 4.1E-204 T 21-04-2016 VFU_RS03710 a92a28f96a5fed72bd9cb74814239120 458 PANTHER PTHR30473 200 458 4.1E-204 T 21-04-2016 VFU_RS03710 a92a28f96a5fed72bd9cb74814239120 458 Pfam PF13638 PIN domain 9 150 9.4E-35 T 21-04-2016 IPR002716 PIN domain VFU_RS03710 a92a28f96a5fed72bd9cb74814239120 458 Pfam PF02562 PhoH-like protein 248 452 2.0E-54 T 21-04-2016 IPR003714 PhoH-like protein GO:0005524 VFU_RS03710 a92a28f96a5fed72bd9cb74814239120 458 SMART SM00670 7 141 7.8E-8 T 21-04-2016 IPR002716 PIN domain VFU_RS03710 a92a28f96a5fed72bd9cb74814239120 458 PANTHER PTHR30473:SF2 6 182 4.1E-204 T 21-04-2016 VFU_RS03710 a92a28f96a5fed72bd9cb74814239120 458 PANTHER PTHR30473:SF2 200 458 4.1E-204 T 21-04-2016 VFU_RS04620 f963bd2296d185f5fe7fbeeed1728c6c 901 Gene3D G3DSA:3.30.56.50 2 50 8.6E-23 T 21-04-2016 VFU_RS04620 f963bd2296d185f5fe7fbeeed1728c6c 901 PANTHER PTHR23115:SF184 753 901 2.6E-213 T 21-04-2016 VFU_RS04620 f963bd2296d185f5fe7fbeeed1728c6c 901 PANTHER PTHR23115:SF184 381 728 2.6E-213 T 21-04-2016 VFU_RS04620 f963bd2296d185f5fe7fbeeed1728c6c 901 ProSitePatterns PS01176 Initiation factor 2 signature. 851 873 - T 21-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 VFU_RS04620 f963bd2296d185f5fe7fbeeed1728c6c 901 PANTHER PTHR23115 753 901 2.6E-213 T 21-04-2016 VFU_RS04620 f963bd2296d185f5fe7fbeeed1728c6c 901 PANTHER PTHR23115 381 728 2.6E-213 T 21-04-2016 VFU_RS04620 f963bd2296d185f5fe7fbeeed1728c6c 901 Gene3D G3DSA:3.40.50.300 394 560 1.7E-44 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS04620 f963bd2296d185f5fe7fbeeed1728c6c 901 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 404 559 2.9E-32 T 21-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VFU_RS04620 f963bd2296d185f5fe7fbeeed1728c6c 901 Pfam PF11987 Translation-initiation factor 2 685 790 9.4E-37 T 21-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 VFU_RS04620 f963bd2296d185f5fe7fbeeed1728c6c 901 Pfam PF00009 Elongation factor Tu GTP binding domain 404 561 3.3E-32 T 21-04-2016 VFU_RS04620 f963bd2296d185f5fe7fbeeed1728c6c 901 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 318 900 1.0E-286 T 21-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 VFU_RS04620 f963bd2296d185f5fe7fbeeed1728c6c 901 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 61 99 5.2E-16 T 21-04-2016 IPR013575 Initiation factor 2 associated domain, bacterial VFU_RS04620 f963bd2296d185f5fe7fbeeed1728c6c 901 SUPERFAMILY SSF50447 573 655 6.65E-25 T 21-04-2016 IPR009000 Translation protein, beta-barrel domain VFU_RS04620 f963bd2296d185f5fe7fbeeed1728c6c 901 Gene3D G3DSA:2.40.30.10 573 664 2.9E-23 T 21-04-2016 VFU_RS04620 f963bd2296d185f5fe7fbeeed1728c6c 901 SUPERFAMILY SSF52540 395 568 4.42E-52 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS04620 f963bd2296d185f5fe7fbeeed1728c6c 901 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 50 1.2E-8 T 21-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal VFU_RS04620 f963bd2296d185f5fe7fbeeed1728c6c 901 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 325 375 6.8E-15 T 21-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal VFU_RS04620 f963bd2296d185f5fe7fbeeed1728c6c 901 SUPERFAMILY SSF46955 3 50 1.46E-12 T 21-04-2016 IPR009061 Putative DNA-binding domain VFU_RS04620 f963bd2296d185f5fe7fbeeed1728c6c 901 Gene3D G3DSA:3.40.50.10050 700 779 3.1E-25 T 21-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 VFU_RS04620 f963bd2296d185f5fe7fbeeed1728c6c 901 SUPERFAMILY SSF52156 678 807 1.44E-38 T 21-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 VFU_RS04620 f963bd2296d185f5fe7fbeeed1728c6c 901 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 898 17.671 T 21-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 VFU_RS04620 f963bd2296d185f5fe7fbeeed1728c6c 901 Gene3D G3DSA:2.40.30.10 802 898 2.7E-39 T 21-04-2016 VFU_RS04620 f963bd2296d185f5fe7fbeeed1728c6c 901 SUPERFAMILY SSF50447 802 898 7.27E-34 T 21-04-2016 IPR009000 Translation protein, beta-barrel domain VFU_RS09015 428c335c41e7892f9936c17de40454db 175 Gene3D G3DSA:2.40.128.20 7 172 7.0E-54 T 21-04-2016 IPR012674 Calycin VFU_RS09015 428c335c41e7892f9936c17de40454db 175 PANTHER PTHR10612 13 172 1.0E-46 T 21-04-2016 VFU_RS09015 428c335c41e7892f9936c17de40454db 175 SUPERFAMILY SSF50814 8 173 1.62E-47 T 21-04-2016 IPR011038 Calycin-like VFU_RS09015 428c335c41e7892f9936c17de40454db 175 ProSitePatterns PS00213 Lipocalin signature. 33 44 - T 21-04-2016 IPR022272 Lipocalin family conserved site VFU_RS09015 428c335c41e7892f9936c17de40454db 175 PIRSF PIRSF036893 2 175 1.2E-44 T 21-04-2016 IPR022271 Lipocalin, ApoD type VFU_RS09015 428c335c41e7892f9936c17de40454db 175 PRINTS PR01171 Bacterial lipocalin signature 49 65 1.47E-34 T 21-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 VFU_RS09015 428c335c41e7892f9936c17de40454db 175 PRINTS PR01171 Bacterial lipocalin signature 102 116 1.47E-34 T 21-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 VFU_RS09015 428c335c41e7892f9936c17de40454db 175 PRINTS PR01171 Bacterial lipocalin signature 68 77 1.47E-34 T 21-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 VFU_RS09015 428c335c41e7892f9936c17de40454db 175 PRINTS PR01171 Bacterial lipocalin signature 161 171 1.47E-34 T 21-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 VFU_RS09015 428c335c41e7892f9936c17de40454db 175 PRINTS PR01171 Bacterial lipocalin signature 134 145 1.47E-34 T 21-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 VFU_RS09015 428c335c41e7892f9936c17de40454db 175 PRINTS PR01171 Bacterial lipocalin signature 32 46 1.47E-34 T 21-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 VFU_RS09015 428c335c41e7892f9936c17de40454db 175 Pfam PF08212 Lipocalin-like domain 33 170 2.5E-45 T 21-04-2016 IPR000566 Lipocalin/cytosolic fatty-acid binding domain VFU_RS06680 5701ae3f38060a653f49a8d3fff42ba7 331 Gene3D G3DSA:3.30.390.10 1 123 2.9E-31 T 21-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VFU_RS06680 5701ae3f38060a653f49a8d3fff42ba7 331 PANTHER PTHR13794 6 317 4.6E-86 T 21-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 VFU_RS06680 5701ae3f38060a653f49a8d3fff42ba7 331 SUPERFAMILY SSF54826 1 100 8.24E-25 T 21-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VFU_RS06680 5701ae3f38060a653f49a8d3fff42ba7 331 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 320 23.106 T 21-04-2016 IPR010196 o-succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00079|UniPathway: UPA01057 VFU_RS06680 5701ae3f38060a653f49a8d3fff42ba7 331 Pfam PF13378 Enolase C-terminal domain-like 127 290 1.1E-12 T 21-04-2016 IPR029065 Enolase C-terminal domain-like VFU_RS06680 5701ae3f38060a653f49a8d3fff42ba7 331 PANTHER PTHR13794:SF8 6 317 4.6E-86 T 21-04-2016 IPR010197 o-succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00079|UniPathway: UPA01057 VFU_RS06680 5701ae3f38060a653f49a8d3fff42ba7 331 Gene3D G3DSA:3.20.20.120 124 303 2.7E-44 T 21-04-2016 IPR029065 Enolase C-terminal domain-like VFU_RS06680 5701ae3f38060a653f49a8d3fff42ba7 331 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 7 311 2.4E-116 T 21-04-2016 VFU_RS06680 5701ae3f38060a653f49a8d3fff42ba7 331 SUPERFAMILY SSF51604 106 321 7.86E-47 T 21-04-2016 IPR029065 Enolase C-terminal domain-like VFU_RS06680 5701ae3f38060a653f49a8d3fff42ba7 331 SMART SM00922 116 213 4.4E-6 T 21-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal VFU_RS07085 2a479168f5389ee42ffbd83cd51362c5 191 Gene3D G3DSA:1.10.357.10 56 181 1.0E-16 T 21-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 VFU_RS07085 2a479168f5389ee42ffbd83cd51362c5 191 SUPERFAMILY SSF46689 7 75 5.64E-11 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS07085 2a479168f5389ee42ffbd83cd51362c5 191 Gene3D G3DSA:1.10.10.60 3 55 9.5E-9 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS07085 2a479168f5389ee42ffbd83cd51362c5 191 Pfam PF16925 Bacterial transcriptional repressor C-terminal 79 184 7.3E-9 T 21-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal VFU_RS07085 2a479168f5389ee42ffbd83cd51362c5 191 PANTHER PTHR30055 5 191 4.4E-15 T 21-04-2016 VFU_RS07085 2a479168f5389ee42ffbd83cd51362c5 191 PANTHER PTHR30055:SF47 5 191 4.4E-15 T 21-04-2016 VFU_RS07085 2a479168f5389ee42ffbd83cd51362c5 191 SUPERFAMILY SSF48498 79 188 2.89E-21 T 21-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal VFU_RS07085 2a479168f5389ee42ffbd83cd51362c5 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 58 6.6E-6 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VFU_RS05720 de1f32fa67b688493169e78baa26b216 283 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 4.9E-117 T 21-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 VFU_RS05720 de1f32fa67b688493169e78baa26b216 283 PANTHER PTHR21057:SF6 1 283 3.2E-222 T 21-04-2016 VFU_RS05720 de1f32fa67b688493169e78baa26b216 283 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 48.389 T 21-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 VFU_RS05720 de1f32fa67b688493169e78baa26b216 283 PANTHER PTHR21057 1 283 3.2E-222 T 21-04-2016 VFU_RS05720 de1f32fa67b688493169e78baa26b216 283 Pfam PF00793 DAHP synthetase I family 10 275 5.4E-70 T 21-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 VFU_RS05720 de1f32fa67b688493169e78baa26b216 283 SUPERFAMILY SSF51569 2 278 4.21E-105 T 21-04-2016 VFU_RS05720 de1f32fa67b688493169e78baa26b216 283 Gene3D G3DSA:3.20.20.70 16 277 3.9E-107 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS03630 8b5b7206f47f7eba50617e160528744f 187 PANTHER PTHR37481 1 187 1.4E-54 T 21-04-2016 VFU_RS03630 8b5b7206f47f7eba50617e160528744f 187 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 3 185 23.787 T 21-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 VFU_RS03630 8b5b7206f47f7eba50617e160528744f 187 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 5 182 4.3E-46 T 21-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 VFU_RS03630 8b5b7206f47f7eba50617e160528744f 187 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 8 183 4.2E-46 T 21-04-2016 IPR010664 Lipopolysaccharide assembly, LptC-related VFU_RS03630 8b5b7206f47f7eba50617e160528744f 187 PANTHER PTHR37481:SF1 1 187 1.4E-54 T 21-04-2016 VFU_RS03630 8b5b7206f47f7eba50617e160528744f 187 PIRSF PIRSF028513 2 185 1.5E-28 T 21-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 VFU_RS06080 9f519aedb55c87e7e29a6ad2bddaa6e4 175 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 21-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 VFU_RS06080 9f519aedb55c87e7e29a6ad2bddaa6e4 175 Gene3D G3DSA:3.40.50.360 1 168 1.7E-64 T 21-04-2016 IPR029039 Flavoprotein-like domain VFU_RS06080 9f519aedb55c87e7e29a6ad2bddaa6e4 175 SUPERFAMILY SSF52218 4 171 2.55E-53 T 21-04-2016 IPR029039 Flavoprotein-like domain VFU_RS06080 9f519aedb55c87e7e29a6ad2bddaa6e4 175 Pfam PF00258 Flavodoxin 6 160 5.3E-33 T 21-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VFU_RS06080 9f519aedb55c87e7e29a6ad2bddaa6e4 175 PANTHER PTHR19384 141 172 3.8E-109 T 21-04-2016 VFU_RS06080 9f519aedb55c87e7e29a6ad2bddaa6e4 175 PANTHER PTHR19384 1 120 3.8E-109 T 21-04-2016 VFU_RS06080 9f519aedb55c87e7e29a6ad2bddaa6e4 175 PANTHER PTHR19384:SF77 141 172 3.8E-109 T 21-04-2016 VFU_RS06080 9f519aedb55c87e7e29a6ad2bddaa6e4 175 PANTHER PTHR19384:SF77 1 120 3.8E-109 T 21-04-2016 VFU_RS06080 9f519aedb55c87e7e29a6ad2bddaa6e4 175 PIRSF PIRSF038996 1 172 1.1E-68 T 21-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 VFU_RS06080 9f519aedb55c87e7e29a6ad2bddaa6e4 175 TIGRFAM TIGR01752 flav_long: flavodoxin 4 168 2.5E-73 T 21-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 VFU_RS13530 83dded792e5338205399d9b27b0a11d8 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 21-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site VFU_RS13530 83dded792e5338205399d9b27b0a11d8 107 Gene3D G3DSA:2.60.300.12 2 97 3.3E-37 T 21-04-2016 IPR000361 FeS cluster biogenesis VFU_RS13530 83dded792e5338205399d9b27b0a11d8 107 PANTHER PTHR10072 1 107 2.8E-54 T 21-04-2016 VFU_RS13530 83dded792e5338205399d9b27b0a11d8 107 SUPERFAMILY SSF89360 1 96 1.7E-34 T 21-04-2016 IPR000361 FeS cluster biogenesis VFU_RS13530 83dded792e5338205399d9b27b0a11d8 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 3.5E-27 T 21-04-2016 IPR000361 FeS cluster biogenesis VFU_RS13530 83dded792e5338205399d9b27b0a11d8 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 1.7E-38 T 21-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 VFU_RS13530 83dded792e5338205399d9b27b0a11d8 107 PANTHER PTHR10072:SF48 1 107 2.8E-54 T 21-04-2016 IPR031108 FeS assembly protein IscA-like GO:0005198|GO:0016226|GO:0051536 VFU_RS13530 83dded792e5338205399d9b27b0a11d8 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 4.9E-58 T 21-04-2016 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0016226|GO:0051536 VFU_RS13530 83dded792e5338205399d9b27b0a11d8 107 TIGRFAM TIGR01997 sufA_proteo: FeS assembly scaffold SufA 2 107 1.9E-41 T 21-04-2016 IPR011298 FeS assembly scaffold SufA GO:0016226 VFU_RS09305 ae5f19e015f1136868f49f6552f0957e 325 SUPERFAMILY SSF46626 55 78 5.01E-30 T 21-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VFU_RS09305 ae5f19e015f1136868f49f6552f0957e 325 SUPERFAMILY SSF46626 147 239 5.01E-30 T 21-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VFU_RS09305 ae5f19e015f1136868f49f6552f0957e 325 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 156 229 2.2E-14 T 21-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VFU_RS09305 ae5f19e015f1136868f49f6552f0957e 325 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 243 317 8.0E-11 T 21-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VFU_RS09305 ae5f19e015f1136868f49f6552f0957e 325 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 39 83 1.4E-22 T 21-04-2016 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal UniPathway: UPA00705 VFU_RS09305 ae5f19e015f1136868f49f6552f0957e 325 SUPERFAMILY SSF46626 241 322 1.16E-21 T 21-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VFU_RS09305 ae5f19e015f1136868f49f6552f0957e 325 PIRSF PIRSF000006 1 324 1.6E-105 T 21-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 VFU_RS09305 ae5f19e015f1136868f49f6552f0957e 325 PANTHER PTHR33751:SF1 122 325 4.2E-114 T 21-04-2016 VFU_RS09305 ae5f19e015f1136868f49f6552f0957e 325 PANTHER PTHR33751:SF1 25 79 4.2E-114 T 21-04-2016 VFU_RS09305 ae5f19e015f1136868f49f6552f0957e 325 Gene3D G3DSA:1.10.760.10 151 246 1.7E-32 T 21-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VFU_RS09305 ae5f19e015f1136868f49f6552f0957e 325 Gene3D G3DSA:1.10.760.10 60 82 1.7E-32 T 21-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VFU_RS09305 ae5f19e015f1136868f49f6552f0957e 325 PANTHER PTHR33751 122 325 4.2E-114 T 21-04-2016 VFU_RS09305 ae5f19e015f1136868f49f6552f0957e 325 PANTHER PTHR33751 25 79 4.2E-114 T 21-04-2016 VFU_RS09305 ae5f19e015f1136868f49f6552f0957e 325 PRINTS PR00605 Class IC cytochrome C signature 166 177 1.4E-5 T 21-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VFU_RS09305 ae5f19e015f1136868f49f6552f0957e 325 PRINTS PR00605 Class IC cytochrome C signature 295 317 1.4E-5 T 21-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VFU_RS09305 ae5f19e015f1136868f49f6552f0957e 325 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 115 323 1.0E-56 T 21-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 VFU_RS09305 ae5f19e015f1136868f49f6552f0957e 325 Gene3D G3DSA:1.10.760.10 247 324 8.5E-25 T 21-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VFU_RS02610 705b203f8df5a9b60ef89de7965cd41a 338 Gene3D G3DSA:1.10.40.60 218 287 5.7E-24 T 21-04-2016 VFU_RS02610 705b203f8df5a9b60ef89de7965cd41a 338 PANTHER PTHR38831 1 338 3.2E-69 T 21-04-2016 VFU_RS02610 705b203f8df5a9b60ef89de7965cd41a 338 PIRSF PIRSF002786 2 330 5.0E-70 T 21-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 VFU_RS02610 705b203f8df5a9b60ef89de7965cd41a 338 Gene3D G3DSA:1.10.40.60 101 216 2.2E-36 T 21-04-2016 VFU_RS02610 705b203f8df5a9b60ef89de7965cd41a 338 PANTHER PTHR38831:SF1 1 338 3.2E-69 T 21-04-2016 VFU_RS02610 705b203f8df5a9b60ef89de7965cd41a 338 SUPERFAMILY SSF54523 38 102 1.55E-37 T 21-04-2016 VFU_RS02610 705b203f8df5a9b60ef89de7965cd41a 338 SUPERFAMILY SSF54523 287 327 1.55E-37 T 21-04-2016 VFU_RS02610 705b203f8df5a9b60ef89de7965cd41a 338 SUPERFAMILY SSF158544 103 215 4.45E-32 T 21-04-2016 VFU_RS02610 705b203f8df5a9b60ef89de7965cd41a 338 SUPERFAMILY SSF158544 217 285 8.11E-19 T 21-04-2016 VFU_RS02610 705b203f8df5a9b60ef89de7965cd41a 338 Pfam PF03934 Type II secretion system (T2SS), protein K 33 319 1.0E-88 T 21-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 VFU_RS02610 705b203f8df5a9b60ef89de7965cd41a 338 Gene3D G3DSA:3.30.1300.30 288 328 8.8E-47 T 21-04-2016 VFU_RS02610 705b203f8df5a9b60ef89de7965cd41a 338 Gene3D G3DSA:3.30.1300.30 28 100 8.8E-47 T 21-04-2016 VFU_RS08055 c85f47f17b159d4429b8916db332e5a8 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.1E-16 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS08055 c85f47f17b159d4429b8916db332e5a8 296 SUPERFAMILY SSF46785 3 85 5.39E-18 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS08055 c85f47f17b159d4429b8916db332e5a8 296 Pfam PF03466 LysR substrate binding domain 91 289 4.5E-21 T 21-04-2016 IPR005119 LysR, substrate-binding VFU_RS08055 c85f47f17b159d4429b8916db332e5a8 296 PANTHER PTHR30126:SF29 1 290 2.6E-64 T 21-04-2016 VFU_RS08055 c85f47f17b159d4429b8916db332e5a8 296 Gene3D G3DSA:3.40.190.10 181 253 2.0E-11 T 21-04-2016 VFU_RS08055 c85f47f17b159d4429b8916db332e5a8 296 Gene3D G3DSA:1.10.10.10 2 81 1.0E-22 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS08055 c85f47f17b159d4429b8916db332e5a8 296 Gene3D G3DSA:3.40.190.10 82 180 2.2E-9 T 21-04-2016 VFU_RS08055 c85f47f17b159d4429b8916db332e5a8 296 PANTHER PTHR30126 1 290 2.6E-64 T 21-04-2016 VFU_RS08055 c85f47f17b159d4429b8916db332e5a8 296 SUPERFAMILY SSF53850 91 293 2.9E-28 T 21-04-2016 VFU_RS08030 a6462b5514754b55819e80ba1323636b 277 SUPERFAMILY SSF117396 1 254 9.29E-71 T 21-04-2016 IPR002763 Protein of unknown function DUF72 VFU_RS08030 a6462b5514754b55819e80ba1323636b 277 Gene3D G3DSA:3.20.20.410 1 263 4.2E-73 T 21-04-2016 IPR002763 Protein of unknown function DUF72 VFU_RS08030 a6462b5514754b55819e80ba1323636b 277 PANTHER PTHR30348:SF3 2 277 7.2E-84 T 21-04-2016 VFU_RS08030 a6462b5514754b55819e80ba1323636b 277 PANTHER PTHR30348 2 277 7.2E-84 T 21-04-2016 VFU_RS08030 a6462b5514754b55819e80ba1323636b 277 Pfam PF01904 Protein of unknown function DUF72 12 249 1.9E-56 T 21-04-2016 IPR002763 Protein of unknown function DUF72 VFU_RS13080 cc448c52fd78e9ef52cf92a5935ed47d 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 10 70 15.64 T 21-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VFU_RS13080 cc448c52fd78e9ef52cf92a5935ed47d 80 Gene3D G3DSA:1.10.287.1040 5 76 2.4E-27 T 21-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VFU_RS13080 cc448c52fd78e9ef52cf92a5935ed47d 80 PANTHER PTHR34137 1 75 1.2E-24 T 21-04-2016 VFU_RS13080 cc448c52fd78e9ef52cf92a5935ed47d 80 PIRSF PIRSF006488 1 78 2.6E-22 T 21-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VFU_RS13080 cc448c52fd78e9ef52cf92a5935ed47d 80 Pfam PF02609 Exonuclease VII small subunit 11 61 7.7E-20 T 21-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VFU_RS13080 cc448c52fd78e9ef52cf92a5935ed47d 80 SUPERFAMILY SSF116842 2 73 1.57E-21 T 21-04-2016 VFU_RS13080 cc448c52fd78e9ef52cf92a5935ed47d 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 10 65 4.0E-22 T 21-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VFU_RS13080 cc448c52fd78e9ef52cf92a5935ed47d 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 50 3.0E-19 T 21-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VFU_RS05280 b6d56e7729d906c5be80976247243f27 402 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 396 45.258 T 21-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 VFU_RS05280 b6d56e7729d906c5be80976247243f27 402 Gene3D G3DSA:3.40.50.720 1 150 7.4E-54 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS05280 b6d56e7729d906c5be80976247243f27 402 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 3.6E-46 T 21-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 VFU_RS05280 b6d56e7729d906c5be80976247243f27 402 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 7.9E-37 T 21-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 VFU_RS05280 b6d56e7729d906c5be80976247243f27 402 PANTHER PTHR30525 1 400 1.4E-215 T 21-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 VFU_RS05280 b6d56e7729d906c5be80976247243f27 402 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 397 8.1E-159 T 21-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 VFU_RS05280 b6d56e7729d906c5be80976247243f27 402 SUPERFAMILY SSF69055 302 398 3.27E-28 T 21-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 VFU_RS05280 b6d56e7729d906c5be80976247243f27 402 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 391 5.4E-36 T 21-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 VFU_RS05280 b6d56e7729d906c5be80976247243f27 402 PIRSF PIRSF006205 1 401 1.1E-147 T 21-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 VFU_RS05280 b6d56e7729d906c5be80976247243f27 402 SUPERFAMILY SSF51735 2 150 8.77E-48 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS05280 b6d56e7729d906c5be80976247243f27 402 Gene3D G3DSA:1.10.1740.10 313 399 4.5E-27 T 21-04-2016 VFU_RS05280 b6d56e7729d906c5be80976247243f27 402 SUPERFAMILY SSF55347 126 272 1.47E-61 T 21-04-2016 VFU_RS05525 1af2f048d30e0c75e02ff062becdeb4d 138 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 92 136 4.1E-12 T 21-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VFU_RS05525 1af2f048d30e0c75e02ff062becdeb4d 138 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 138 1.1E-51 T 21-04-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 VFU_RS05525 1af2f048d30e0c75e02ff062becdeb4d 138 Pfam PF00460 Flagella basal body rod protein 7 32 1.8E-7 T 21-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VFU_RS05525 1af2f048d30e0c75e02ff062becdeb4d 138 PANTHER PTHR30435 1 138 1.1E-64 T 21-04-2016 VFU_RS05525 1af2f048d30e0c75e02ff062becdeb4d 138 PANTHER PTHR30435:SF2 1 138 1.1E-64 T 21-04-2016 VFU_RS05525 1af2f048d30e0c75e02ff062becdeb4d 138 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 21-04-2016 IPR019776 Flagellar basal body rod protein, conserved site VFU_RS04580 2a3de87a062b80821d6e6eab57b61427 279 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 21-04-2016 IPR000489 Pterin-binding domain GO:0042558 VFU_RS04580 2a3de87a062b80821d6e6eab57b61427 279 PANTHER PTHR20941:SF1 13 278 2.4E-126 T 21-04-2016 VFU_RS04580 2a3de87a062b80821d6e6eab57b61427 279 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 17 272 9.9E-103 T 21-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 VFU_RS04580 2a3de87a062b80821d6e6eab57b61427 279 Pfam PF00809 Pterin binding enzyme 18 258 2.0E-89 T 21-04-2016 IPR000489 Pterin-binding domain GO:0042558 VFU_RS04580 2a3de87a062b80821d6e6eab57b61427 279 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 21-04-2016 IPR000489 Pterin-binding domain GO:0042558 VFU_RS04580 2a3de87a062b80821d6e6eab57b61427 279 SUPERFAMILY SSF51717 5 275 2.35E-104 T 21-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 VFU_RS04580 2a3de87a062b80821d6e6eab57b61427 279 PANTHER PTHR20941 13 278 2.4E-126 T 21-04-2016 VFU_RS04580 2a3de87a062b80821d6e6eab57b61427 279 Gene3D G3DSA:3.20.20.20 12 275 1.7E-111 T 21-04-2016 IPR000489 Pterin-binding domain GO:0042558 VFU_RS07045 032d577066d7d380749afae91bd86243 663 SMART SM00267 491 653 3.3E-25 T 21-04-2016 IPR000160 GGDEF domain VFU_RS07045 032d577066d7d380749afae91bd86243 663 SMART SM00062 19 220 1.8E-11 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VFU_RS07045 032d577066d7d380749afae91bd86243 663 SMART SM00062 246 464 1.9E-4 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VFU_RS07045 032d577066d7d380749afae91bd86243 663 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 498 646 1.4E-27 T 21-04-2016 IPR000160 GGDEF domain VFU_RS07045 032d577066d7d380749afae91bd86243 663 Gene3D G3DSA:3.40.190.10 34 92 2.0E-11 T 21-04-2016 VFU_RS07045 032d577066d7d380749afae91bd86243 663 Gene3D G3DSA:3.40.190.10 178 216 2.0E-11 T 21-04-2016 VFU_RS07045 032d577066d7d380749afae91bd86243 663 SUPERFAMILY SSF55073 507 646 4.94E-29 T 21-04-2016 IPR029787 Nucleotide cyclase VFU_RS07045 032d577066d7d380749afae91bd86243 663 Gene3D G3DSA:3.40.190.10 350 408 7.4E-5 T 21-04-2016 VFU_RS07045 032d577066d7d380749afae91bd86243 663 Gene3D G3DSA:3.40.190.10 107 156 1.3E-4 T 21-04-2016 VFU_RS07045 032d577066d7d380749afae91bd86243 663 Gene3D G3DSA:3.30.70.270 503 647 7.1E-32 T 21-04-2016 VFU_RS07045 032d577066d7d380749afae91bd86243 663 SUPERFAMILY SSF53850 34 216 1.14E-24 T 21-04-2016 VFU_RS07045 032d577066d7d380749afae91bd86243 663 Gene3D G3DSA:3.40.190.10 249 349 9.7E-17 T 21-04-2016 VFU_RS07045 032d577066d7d380749afae91bd86243 663 Pfam PF00990 Diguanylate cyclase, GGDEF domain 503 646 4.8E-29 T 21-04-2016 IPR000160 GGDEF domain VFU_RS07045 032d577066d7d380749afae91bd86243 663 SUPERFAMILY SSF53850 240 461 2.69E-26 T 21-04-2016 VFU_RS07045 032d577066d7d380749afae91bd86243 663 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 216 1.4E-19 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VFU_RS07045 032d577066d7d380749afae91bd86243 663 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 252 451 1.5E-23 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VFU_RS12800 27b4a317eb4f96741ce789e2e97731a0 169 PANTHER PTHR30175 1 118 3.0E-55 T 21-04-2016 VFU_RS12800 27b4a317eb4f96741ce789e2e97731a0 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 4.4E-50 T 21-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VFU_RS12800 27b4a317eb4f96741ce789e2e97731a0 169 SUPERFAMILY SSF51261 18 166 5.41E-55 T 21-04-2016 IPR011055 Duplicated hybrid motif VFU_RS12800 27b4a317eb4f96741ce789e2e97731a0 169 Gene3D G3DSA:2.70.70.10 17 166 2.3E-59 T 21-04-2016 VFU_RS12800 27b4a317eb4f96741ce789e2e97731a0 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 21-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VFU_RS12800 27b4a317eb4f96741ce789e2e97731a0 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 5.2E-49 T 21-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VFU_RS03760 a1e97e8b997817895b14eed2051bf0d7 157 Pfam PF06271 RDD family 8 147 2.8E-22 T 21-04-2016 IPR010432 RDD VFU_RS03760 a1e97e8b997817895b14eed2051bf0d7 157 PANTHER PTHR36115:SF2 1 155 5.6E-65 T 21-04-2016 VFU_RS03760 a1e97e8b997817895b14eed2051bf0d7 157 PANTHER PTHR36115 1 155 5.6E-65 T 21-04-2016 VFU_RS04110 97747558ff0262d7d17366035a2ea1e3 321 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 27 188 9.4E-38 T 21-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VFU_RS04110 97747558ff0262d7d17366035a2ea1e3 321 SUPERFAMILY SSF52540 30 225 1.97E-45 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS04110 97747558ff0262d7d17366035a2ea1e3 321 Gene3D G3DSA:3.30.300.20 213 314 1.1E-38 T 21-04-2016 IPR015946 K homology domain-like, alpha/beta VFU_RS04110 97747558ff0262d7d17366035a2ea1e3 321 Hamap MF_00367 GTPase Era [era]. 25 317 35.206 T 21-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 VFU_RS04110 97747558ff0262d7d17366035a2ea1e3 321 Gene3D G3DSA:3.40.50.300 28 212 8.1E-44 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS04110 97747558ff0262d7d17366035a2ea1e3 321 Pfam PF07650 KH domain 228 305 3.6E-19 T 21-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 VFU_RS04110 97747558ff0262d7d17366035a2ea1e3 321 PANTHER PTHR11649 17 320 1.8E-120 T 21-04-2016 VFU_RS04110 97747558ff0262d7d17366035a2ea1e3 321 SUPERFAMILY SSF54814 201 317 8.5E-40 T 21-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 VFU_RS04110 97747558ff0262d7d17366035a2ea1e3 321 Pfam PF01926 50S ribosome-binding GTPase 30 144 9.5E-23 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 VFU_RS04110 97747558ff0262d7d17366035a2ea1e3 321 TIGRFAM TIGR00436 era: GTP-binding protein Era 28 300 3.6E-109 T 21-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 VFU_RS04110 97747558ff0262d7d17366035a2ea1e3 321 PANTHER PTHR11649:SF3 17 320 1.8E-120 T 21-04-2016 VFU_RS07365 bc2a4d30b580f223a063e78e9659b3bb 262 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 256 2.1E-16 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS07365 bc2a4d30b580f223a063e78e9659b3bb 262 PANTHER PTHR30465:SF2 5 259 4.7E-56 T 21-04-2016 VFU_RS07365 bc2a4d30b580f223a063e78e9659b3bb 262 SUPERFAMILY SSF161098 64 252 2.75E-19 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS07365 bc2a4d30b580f223a063e78e9659b3bb 262 PANTHER PTHR30465 5 259 4.7E-56 T 21-04-2016 VFU_RS07365 bc2a4d30b580f223a063e78e9659b3bb 262 Gene3D G3DSA:1.10.3720.10 60 258 1.1E-19 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS02310 1e84a19398b3aaaeb687876293af0305 156 ProSitePatterns PS00818 Dps protein family signature 1. 38 54 - T 21-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 VFU_RS02310 1e84a19398b3aaaeb687876293af0305 156 ProSitePatterns PS00819 Dps protein family signature 2. 64 78 - T 21-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 VFU_RS02310 1e84a19398b3aaaeb687876293af0305 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 62 78 2.8E-14 T 21-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 VFU_RS02310 1e84a19398b3aaaeb687876293af0305 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 133 151 2.8E-14 T 21-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 VFU_RS02310 1e84a19398b3aaaeb687876293af0305 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 38 54 2.8E-14 T 21-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 VFU_RS02310 1e84a19398b3aaaeb687876293af0305 156 Gene3D G3DSA:1.20.1260.10 1 156 3.6E-59 T 21-04-2016 IPR012347 Ferritin-related VFU_RS02310 1e84a19398b3aaaeb687876293af0305 156 Pfam PF00210 Ferritin-like domain 19 156 1.4E-26 T 21-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 VFU_RS02310 1e84a19398b3aaaeb687876293af0305 156 SUPERFAMILY SSF47240 2 156 4.72E-45 T 21-04-2016 IPR009078 Ferritin-like superfamily VFU_RS02310 1e84a19398b3aaaeb687876293af0305 156 PANTHER PTHR30295 1 156 2.3E-64 T 21-04-2016 VFU_RS02310 1e84a19398b3aaaeb687876293af0305 156 PANTHER PTHR30295:SF6 1 156 2.3E-64 T 21-04-2016 VFU_RS02310 1e84a19398b3aaaeb687876293af0305 156 PIRSF PIRSF005900 1 156 4.0E-46 T 21-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 VFU_RS00440 eaf820d90e4bf6501757da9ca6b1d081 260 Gene3D G3DSA:3.40.930.10 127 252 6.6E-20 T 21-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VFU_RS00440 eaf820d90e4bf6501757da9ca6b1d081 260 SUPERFAMILY SSF55804 124 250 1.31E-17 T 21-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 VFU_RS00440 eaf820d90e4bf6501757da9ca6b1d081 260 PIRSF PIRSF029195 1 258 3.7E-40 T 21-04-2016 IPR016910 Uncharacterised conserved protein UCP029195, PTS-EIIA 2 VFU_RS00440 eaf820d90e4bf6501757da9ca6b1d081 260 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 124 250 1.9E-19 T 21-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VFU_RS00440 eaf820d90e4bf6501757da9ca6b1d081 260 SUPERFAMILY SSF55594 8 87 5.5E-6 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like VFU_RS13965 8668ee7a3282b365a973f0c37d045a50 201 Pfam PF10144 Bacterial virulence factor haemolysin 6 152 5.1E-40 T 21-04-2016 IPR019305 Uncharacterised protein family Smp VFU_RS10370 756b134c1453fb378545a7531247d040 901 PANTHER PTHR33121:SF13 632 901 3.2E-74 T 21-04-2016 VFU_RS10370 756b134c1453fb378545a7531247d040 901 Pfam PF00990 Diguanylate cyclase, GGDEF domain 479 589 5.2E-10 T 21-04-2016 IPR000160 GGDEF domain VFU_RS10370 756b134c1453fb378545a7531247d040 901 Pfam PF00563 EAL domain 651 889 6.8E-71 T 21-04-2016 IPR001633 EAL domain VFU_RS10370 756b134c1453fb378545a7531247d040 901 Pfam PF05228 CHASE4 domain 58 207 2.6E-27 T 21-04-2016 IPR007892 CHASE4 VFU_RS10370 756b134c1453fb378545a7531247d040 901 SMART SM00052 645 894 7.8E-97 T 21-04-2016 IPR001633 EAL domain VFU_RS10370 756b134c1453fb378545a7531247d040 901 Pfam PF13426 PAS domain 368 466 5.3E-10 T 21-04-2016 IPR000014 PAS domain VFU_RS10370 756b134c1453fb378545a7531247d040 901 SUPERFAMILY SSF55073 484 614 3.3E-12 T 21-04-2016 IPR029787 Nucleotide cyclase VFU_RS10370 756b134c1453fb378545a7531247d040 901 Gene3D G3DSA:3.30.70.270 480 596 7.0E-13 T 21-04-2016 VFU_RS10370 756b134c1453fb378545a7531247d040 901 SMART SM00267 467 623 1.4E-4 T 21-04-2016 IPR000160 GGDEF domain VFU_RS10370 756b134c1453fb378545a7531247d040 901 Gene3D G3DSA:3.30.450.20 347 465 9.7E-15 T 21-04-2016 VFU_RS10370 756b134c1453fb378545a7531247d040 901 SUPERFAMILY SSF55785 347 465 5.71E-13 T 21-04-2016 IPR000014 PAS domain VFU_RS10370 756b134c1453fb378545a7531247d040 901 SMART SM00091 357 422 8.6E-4 T 21-04-2016 IPR000014 PAS domain VFU_RS10370 756b134c1453fb378545a7531247d040 901 Gene3D G3DSA:3.20.20.450 649 895 1.9E-86 T 21-04-2016 IPR001633 EAL domain VFU_RS10370 756b134c1453fb378545a7531247d040 901 PANTHER PTHR33121 632 901 3.2E-74 T 21-04-2016 VFU_RS10370 756b134c1453fb378545a7531247d040 901 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 356 472 2.5E-10 T 21-04-2016 IPR000014 PAS domain VFU_RS10370 756b134c1453fb378545a7531247d040 901 SUPERFAMILY SSF141868 651 897 8.37E-78 T 21-04-2016 IPR001633 EAL domain VFU_RS02070 2976bd3628037a23928e33fc48412f6c 333 PANTHER PTHR30036 9 333 1.1E-96 T 21-04-2016 VFU_RS02070 2976bd3628037a23928e33fc48412f6c 333 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 32 327 1.9E-76 T 21-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain VFU_RS02070 2976bd3628037a23928e33fc48412f6c 333 Gene3D G3DSA:3.40.50.2300 32 155 1.0E-38 T 21-04-2016 VFU_RS02070 2976bd3628037a23928e33fc48412f6c 333 PANTHER PTHR30036:SF1 9 333 1.1E-96 T 21-04-2016 VFU_RS02070 2976bd3628037a23928e33fc48412f6c 333 Gene3D G3DSA:3.40.50.2300 156 304 4.5E-47 T 21-04-2016 VFU_RS02070 2976bd3628037a23928e33fc48412f6c 333 SUPERFAMILY SSF53822 33 331 1.31E-65 T 21-04-2016 IPR028082 Periplasmic binding protein-like I VFU_RS02070 2976bd3628037a23928e33fc48412f6c 333 PIRSF PIRSF002816 1 333 4.0E-148 T 21-04-2016 IPR026266 L-arabinose-binding periplasmic protein GO:0042882 VFU_RS11585 54c70b2f6a0f941971f633ef1df360ff 335 PANTHER PTHR30160:SF13 1 329 1.2E-99 T 21-04-2016 VFU_RS11585 54c70b2f6a0f941971f633ef1df360ff 335 Gene3D G3DSA:3.40.50.300 158 170 5.1E-6 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS11585 54c70b2f6a0f941971f633ef1df360ff 335 Gene3D G3DSA:3.40.50.300 48 123 5.1E-6 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS11585 54c70b2f6a0f941971f633ef1df360ff 335 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 328 40.601 T 21-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 VFU_RS11585 54c70b2f6a0f941971f633ef1df360ff 335 SUPERFAMILY SSF52540 50 162 3.67E-12 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS11585 54c70b2f6a0f941971f633ef1df360ff 335 PANTHER PTHR30160 1 329 1.2E-99 T 21-04-2016 VFU_RS11585 54c70b2f6a0f941971f633ef1df360ff 335 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 18 322 4.7E-112 T 21-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 VFU_RS11585 54c70b2f6a0f941971f633ef1df360ff 335 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 24 325 1.4E-93 T 21-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 VFU_RS13445 de44627b29bf910becdaa604b68e15f9 487 PANTHER PTHR11911 1 281 1.3E-249 T 21-04-2016 VFU_RS13445 de44627b29bf910becdaa604b68e15f9 487 PANTHER PTHR11911 299 485 1.3E-249 T 21-04-2016 VFU_RS13445 de44627b29bf910becdaa604b68e15f9 487 PIRSF PIRSF000130 1 487 1.5E-200 T 21-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 VFU_RS13445 de44627b29bf910becdaa604b68e15f9 487 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 3.2E-196 T 21-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 VFU_RS13445 de44627b29bf910becdaa604b68e15f9 487 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 84.449 T 21-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 VFU_RS13445 de44627b29bf910becdaa604b68e15f9 487 Pfam PF00571 CBS domain 152 201 0.004 T 21-04-2016 IPR000644 CBS domain VFU_RS13445 de44627b29bf910becdaa604b68e15f9 487 Pfam PF00571 CBS domain 95 140 2.9E-10 T 21-04-2016 IPR000644 CBS domain VFU_RS13445 de44627b29bf910becdaa604b68e15f9 487 PANTHER PTHR11911:SF6 1 281 1.3E-249 T 21-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 VFU_RS13445 de44627b29bf910becdaa604b68e15f9 487 PANTHER PTHR11911:SF6 299 485 1.3E-249 T 21-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 VFU_RS13445 de44627b29bf910becdaa604b68e15f9 487 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 21-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 VFU_RS13445 de44627b29bf910becdaa604b68e15f9 487 SUPERFAMILY SSF51412 217 477 1.44E-124 T 21-04-2016 VFU_RS13445 de44627b29bf910becdaa604b68e15f9 487 SUPERFAMILY SSF51412 1 90 1.44E-124 T 21-04-2016 VFU_RS13445 de44627b29bf910becdaa604b68e15f9 487 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 2.2E-161 T 21-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 VFU_RS13445 de44627b29bf910becdaa604b68e15f9 487 Gene3D G3DSA:3.20.20.70 2 485 1.5E-197 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS13445 de44627b29bf910becdaa604b68e15f9 487 SMART SM00116 96 144 1.5E-12 T 21-04-2016 IPR000644 CBS domain VFU_RS13445 de44627b29bf910becdaa604b68e15f9 487 SMART SM00116 158 206 3.2E-5 T 21-04-2016 IPR000644 CBS domain VFU_RS13445 de44627b29bf910becdaa604b68e15f9 487 SUPERFAMILY SSF54631 94 203 3.92E-25 T 21-04-2016 VFU_RS13445 de44627b29bf910becdaa604b68e15f9 487 SMART SM01240 7 473 0.0 T 21-04-2016 VFU_RS09125 c950537c824509957134cfa9fb2878fd 596 SUPERFAMILY SSF52540 12 172 4.08E-23 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS09125 c950537c824509957134cfa9fb2878fd 596 Gene3D G3DSA:2.170.190.11 240 331 1.5E-27 T 21-04-2016 VFU_RS09125 c950537c824509957134cfa9fb2878fd 596 Gene3D G3DSA:3.40.50.300 11 173 1.8E-60 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS09125 c950537c824509957134cfa9fb2878fd 596 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 443 476 - T 21-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 VFU_RS09125 c950537c824509957134cfa9fb2878fd 596 Gene3D G3DSA:3.40.980.10 353 521 1.5E-66 T 21-04-2016 IPR001453 MoaB/Mog domain VFU_RS09125 c950537c824509957134cfa9fb2878fd 596 Pfam PF00994 Probable molybdopterin binding domain 372 507 5.0E-27 T 21-04-2016 IPR001453 MoaB/Mog domain VFU_RS09125 c950537c824509957134cfa9fb2878fd 596 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 366 503 6.8E-32 T 21-04-2016 IPR001453 MoaB/Mog domain VFU_RS09125 c950537c824509957134cfa9fb2878fd 596 SUPERFAMILY SSF63867 517 594 6.67E-23 T 21-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 VFU_RS09125 c950537c824509957134cfa9fb2878fd 596 PIRSF PIRSF036618 1 596 0.0 T 21-04-2016 IPR012182 Bifunctional molybdenum cofactor biosynthesis MobB/MoeA VFU_RS09125 c950537c824509957134cfa9fb2878fd 596 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 14 146 4.8E-47 T 21-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 VFU_RS09125 c950537c824509957134cfa9fb2878fd 596 PANTHER PTHR10192 197 592 4.5E-161 T 21-04-2016 VFU_RS09125 c950537c824509957134cfa9fb2878fd 596 SUPERFAMILY SSF53218 367 513 1.28E-44 T 21-04-2016 IPR001453 MoaB/Mog domain VFU_RS09125 c950537c824509957134cfa9fb2878fd 596 SUPERFAMILY SSF63882 195 366 2.62E-46 T 21-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 VFU_RS09125 c950537c824509957134cfa9fb2878fd 596 SMART SM00852 370 507 2.2E-41 T 21-04-2016 IPR001453 MoaB/Mog domain VFU_RS09125 c950537c824509957134cfa9fb2878fd 596 Pfam PF03453 MoeA N-terminal region (domain I and II) 198 357 6.1E-33 T 21-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 VFU_RS09125 c950537c824509957134cfa9fb2878fd 596 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 14 169 1.3E-42 T 21-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 VFU_RS09125 c950537c824509957134cfa9fb2878fd 596 Pfam PF03454 MoeA C-terminal region (domain IV) 520 592 1.0E-20 T 21-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 VFU_RS09125 c950537c824509957134cfa9fb2878fd 596 Gene3D G3DSA:2.40.340.10 522 590 1.4E-29 T 21-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 VFU_RS09125 c950537c824509957134cfa9fb2878fd 596 Gene3D G3DSA:3.90.105.10 217 239 1.2E-14 T 21-04-2016 VFU_RS09125 c950537c824509957134cfa9fb2878fd 596 Gene3D G3DSA:3.90.105.10 332 352 1.2E-14 T 21-04-2016 VFU_RS14270 ab0cb230bef9f14c112deafd0dd00bc5 316 Gene3D G3DSA:3.40.50.150 220 316 9.9E-50 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS14270 ab0cb230bef9f14c112deafd0dd00bc5 316 Gene3D G3DSA:3.40.50.150 7 110 9.9E-50 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS14270 ab0cb230bef9f14c112deafd0dd00bc5 316 PIRSF PIRSF004486 1 316 6.1E-100 T 21-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VFU_RS14270 ab0cb230bef9f14c112deafd0dd00bc5 316 Gene3D G3DSA:1.10.150.170 112 219 7.8E-35 T 21-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VFU_RS14270 ab0cb230bef9f14c112deafd0dd00bc5 316 PANTHER PTHR11265:SF0 1 316 2.1E-145 T 21-04-2016 VFU_RS14270 ab0cb230bef9f14c112deafd0dd00bc5 316 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 315 3.0E-119 T 21-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VFU_RS14270 ab0cb230bef9f14c112deafd0dd00bc5 316 Pfam PF01795 MraW methylase family 5 315 5.3E-111 T 21-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VFU_RS14270 ab0cb230bef9f14c112deafd0dd00bc5 316 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 316 38.064 T 21-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VFU_RS14270 ab0cb230bef9f14c112deafd0dd00bc5 316 PANTHER PTHR11265 1 316 2.1E-145 T 21-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VFU_RS14270 ab0cb230bef9f14c112deafd0dd00bc5 316 SUPERFAMILY SSF53335 7 113 1.58E-44 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS14270 ab0cb230bef9f14c112deafd0dd00bc5 316 SUPERFAMILY SSF53335 217 316 1.58E-44 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS14270 ab0cb230bef9f14c112deafd0dd00bc5 316 SUPERFAMILY SSF81799 113 216 1.01E-30 T 21-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VFU_RS20455 16acdb2b51fca89d9617c684c4f22f2f 526 PANTHER PTHR13734 119 513 1.0E-151 T 21-04-2016 VFU_RS20455 16acdb2b51fca89d9617c684c4f22f2f 526 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 1 526 8.0E-226 T 21-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 VFU_RS20455 16acdb2b51fca89d9617c684c4f22f2f 526 Pfam PF08335 GlnD PII-uridylyltransferase 1 139 1.8E-36 T 21-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 VFU_RS20455 16acdb2b51fca89d9617c684c4f22f2f 526 SUPERFAMILY SSF109604 243 381 8.79E-14 T 21-04-2016 VFU_RS20455 16acdb2b51fca89d9617c684c4f22f2f 526 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 526 227.038 T 21-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 VFU_RS20455 16acdb2b51fca89d9617c684c4f22f2f 526 SMART SM00471 272 419 5.0E-10 T 21-04-2016 IPR003607 HD/PDEase domain VFU_RS20455 16acdb2b51fca89d9617c684c4f22f2f 526 SUPERFAMILY SSF81593 12 135 2.59E-10 T 21-04-2016 VFU_RS20455 16acdb2b51fca89d9617c684c4f22f2f 526 PANTHER PTHR13734:SF45 119 513 1.0E-151 T 21-04-2016 VFU_RS20455 16acdb2b51fca89d9617c684c4f22f2f 526 Pfam PF01966 HD domain 277 409 1.2E-13 T 21-04-2016 IPR006674 HD domain VFU_RS20455 16acdb2b51fca89d9617c684c4f22f2f 526 Gene3D G3DSA:1.10.3210.10 246 435 4.6E-26 T 21-04-2016 IPR006674 HD domain VFU_RS07800 1a51e1b96cc7929ba9478c814a602105 134 SUPERFAMILY SSF81273 2 58 1.75E-16 T 21-04-2016 VFU_RS07800 1a51e1b96cc7929ba9478c814a602105 134 PANTHER PTHR38097 2 134 1.1E-59 T 21-04-2016 VFU_RS07800 1a51e1b96cc7929ba9478c814a602105 134 PIRSF PIRSF002096 1 134 2.4E-53 T 21-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 VFU_RS07800 1a51e1b96cc7929ba9478c814a602105 134 SMART SM00528 88 134 7.5E-22 T 21-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 VFU_RS07800 1a51e1b96cc7929ba9478c814a602105 134 Gene3D G3DSA:1.10.287.1050 1 58 4.8E-19 T 21-04-2016 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 VFU_RS07800 1a51e1b96cc7929ba9478c814a602105 134 Gene3D G3DSA:4.10.430.10 92 134 7.3E-23 T 21-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 VFU_RS07800 1a51e1b96cc7929ba9478c814a602105 134 SUPERFAMILY SSF81273 94 133 1.26E-9 T 21-04-2016 VFU_RS07800 1a51e1b96cc7929ba9478c814a602105 134 PANTHER PTHR38097:SF2 2 134 1.1E-59 T 21-04-2016 VFU_RS07800 1a51e1b96cc7929ba9478c814a602105 134 Pfam PF00816 H-NS histone family 37 128 3.8E-18 T 21-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 VFU_RS11795 d48a21c9adb5403f096859be30bd5276 434 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 3.3E-43 T 21-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 VFU_RS11795 d48a21c9adb5403f096859be30bd5276 434 SUPERFAMILY SSF54534 90 241 6.68E-36 T 21-04-2016 VFU_RS11795 d48a21c9adb5403f096859be30bd5276 434 Gene3D G3DSA:3.10.50.40 155 215 2.8E-9 T 21-04-2016 VFU_RS11795 d48a21c9adb5403f096859be30bd5276 434 PANTHER PTHR30560:SF3 1 430 9.2E-143 T 21-04-2016 VFU_RS11795 d48a21c9adb5403f096859be30bd5276 434 PANTHER PTHR30560 1 430 9.2E-143 T 21-04-2016 VFU_RS11795 d48a21c9adb5403f096859be30bd5276 434 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 156 233 1.0E-12 T 21-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 VFU_RS11795 d48a21c9adb5403f096859be30bd5276 434 TIGRFAM TIGR00115 tig: trigger factor 11 412 7.5E-143 T 21-04-2016 IPR005215 Trigger factor GO:0015031 VFU_RS11795 d48a21c9adb5403f096859be30bd5276 434 SUPERFAMILY SSF102735 1 130 8.89E-42 T 21-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 VFU_RS11795 d48a21c9adb5403f096859be30bd5276 434 Gene3D G3DSA:3.30.70.1050 1 118 6.8E-41 T 21-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 VFU_RS11795 d48a21c9adb5403f096859be30bd5276 434 SUPERFAMILY SSF109998 248 429 4.12E-49 T 21-04-2016 IPR027304 Trigger factor/SurA domain VFU_RS11795 d48a21c9adb5403f096859be30bd5276 434 Gene3D G3DSA:1.10.3120.10 216 388 5.1E-61 T 21-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 VFU_RS11795 d48a21c9adb5403f096859be30bd5276 434 Hamap MF_00303 Trigger factor [tig]. 1 418 21.719 T 21-04-2016 IPR005215 Trigger factor GO:0015031 VFU_RS11795 d48a21c9adb5403f096859be30bd5276 434 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 412 8.5E-40 T 21-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 VFU_RS11795 d48a21c9adb5403f096859be30bd5276 434 PIRSF PIRSF003095 1 433 1.4E-128 T 21-04-2016 IPR005215 Trigger factor GO:0015031 VFU_RS13515 250ed94224d6d7453f4f1549ef9f1ef2 112 PRINTS PR00355 Adrenodoxin signature 83 91 5.7E-10 T 21-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 VFU_RS13515 250ed94224d6d7453f4f1549ef9f1ef2 112 PRINTS PR00355 Adrenodoxin signature 60 74 5.7E-10 T 21-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 VFU_RS13515 250ed94224d6d7453f4f1549ef9f1ef2 112 PRINTS PR00355 Adrenodoxin signature 42 52 5.7E-10 T 21-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 VFU_RS13515 250ed94224d6d7453f4f1549ef9f1ef2 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 110 8.3E-62 T 21-04-2016 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 VFU_RS13515 250ed94224d6d7453f4f1549ef9f1ef2 112 SUPERFAMILY SSF54292 4 107 3.05E-34 T 21-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VFU_RS13515 250ed94224d6d7453f4f1549ef9f1ef2 112 PANTHER PTHR23426 7 112 1.3E-40 T 21-04-2016 VFU_RS13515 250ed94224d6d7453f4f1549ef9f1ef2 112 Gene3D G3DSA:3.10.20.30 4 108 1.7E-35 T 21-04-2016 IPR012675 Beta-grasp domain VFU_RS13515 250ed94224d6d7453f4f1549ef9f1ef2 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 12 92 6.2E-16 T 21-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VFU_RS13515 250ed94224d6d7453f4f1549ef9f1ef2 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 21-04-2016 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 VFU_RS14920 c391909efe3a05be6304d917dfc7bbc3 375 Pfam PF01464 Transglycosylase SLT domain 211 334 1.5E-28 T 21-04-2016 IPR008258 Transglycosylase SLT domain 1 VFU_RS14920 c391909efe3a05be6304d917dfc7bbc3 375 Gene3D G3DSA:1.10.530.10 177 373 3.3E-42 T 21-04-2016 VFU_RS14920 c391909efe3a05be6304d917dfc7bbc3 375 SUPERFAMILY SSF53955 178 370 5.63E-37 T 21-04-2016 IPR023346 Lysozyme-like domain VFU_RS14920 c391909efe3a05be6304d917dfc7bbc3 375 Pfam PF11873 Domain of unknown function (DUF3393) 4 205 8.9E-77 T 21-04-2016 IPR024570 Murein transglycosylase-C, N-terminal VFU_RS14920 c391909efe3a05be6304d917dfc7bbc3 375 PANTHER PTHR21666 190 374 1.2E-48 T 21-04-2016 VFU_RS14920 c391909efe3a05be6304d917dfc7bbc3 375 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 228 256 - T 21-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VFU_RS14920 c391909efe3a05be6304d917dfc7bbc3 375 PANTHER PTHR21666:SF224 190 374 1.2E-48 T 21-04-2016 VFU_RS07305 28934a32d50999547a61f263bb68fa80 668 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 651 668 - T 21-04-2016 IPR010917 TonB-dependent receptor, conserved site VFU_RS07305 28934a32d50999547a61f263bb68fa80 668 Gene3D G3DSA:2.170.130.10 21 158 2.3E-28 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 VFU_RS07305 28934a32d50999547a61f263bb68fa80 668 SUPERFAMILY SSF56935 13 668 1.25E-95 T 21-04-2016 VFU_RS07305 28934a32d50999547a61f263bb68fa80 668 Pfam PF00593 TonB dependent receptor 427 665 1.4E-16 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 VFU_RS07305 28934a32d50999547a61f263bb68fa80 668 PANTHER PTHR32552 1 668 4.6E-192 T 21-04-2016 VFU_RS07305 28934a32d50999547a61f263bb68fa80 668 Gene3D G3DSA:2.40.170.20 159 668 4.2E-67 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 VFU_RS07305 28934a32d50999547a61f263bb68fa80 668 Pfam PF07715 TonB-dependent Receptor Plug Domain 41 156 2.2E-12 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 VFU_RS07305 28934a32d50999547a61f263bb68fa80 668 PANTHER PTHR32552:SF24 1 668 4.6E-192 T 21-04-2016 IPR030150 TonB-dependent siderophore receptor ViuA GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 VFU_RS03405 1c374090fd0fe0a71f780c050d9e8fb6 330 Gene3D G3DSA:3.30.1360.10 9 57 3.0E-10 T 21-04-2016 VFU_RS03405 1c374090fd0fe0a71f780c050d9e8fb6 330 SMART SM00662 23 235 5.5E-104 T 21-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VFU_RS03405 1c374090fd0fe0a71f780c050d9e8fb6 330 Gene3D G3DSA:2.170.120.12 58 178 1.7E-41 T 21-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VFU_RS03405 1c374090fd0fe0a71f780c050d9e8fb6 330 SUPERFAMILY SSF55257 7 53 9.81E-30 T 21-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VFU_RS03405 1c374090fd0fe0a71f780c050d9e8fb6 330 SUPERFAMILY SSF55257 180 234 9.81E-30 T 21-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VFU_RS03405 1c374090fd0fe0a71f780c050d9e8fb6 330 SUPERFAMILY SSF56553 53 179 4.19E-41 T 21-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VFU_RS03405 1c374090fd0fe0a71f780c050d9e8fb6 330 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 318 34.962 T 21-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VFU_RS03405 1c374090fd0fe0a71f780c050d9e8fb6 330 PANTHER PTHR32108 1 330 1.9E-154 T 21-04-2016 VFU_RS03405 1c374090fd0fe0a71f780c050d9e8fb6 330 Gene3D G3DSA:1.10.150.20 245 329 7.2E-38 T 21-04-2016 VFU_RS03405 1c374090fd0fe0a71f780c050d9e8fb6 330 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 229 2.5E-23 T 21-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VFU_RS03405 1c374090fd0fe0a71f780c050d9e8fb6 330 PANTHER PTHR32108:SF0 1 330 1.9E-154 T 21-04-2016 VFU_RS03405 1c374090fd0fe0a71f780c050d9e8fb6 330 SUPERFAMILY SSF47789 252 326 1.44E-25 T 21-04-2016 VFU_RS03405 1c374090fd0fe0a71f780c050d9e8fb6 330 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 257 330 2.0E-36 T 21-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VFU_RS03405 1c374090fd0fe0a71f780c050d9e8fb6 330 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 62 157 1.0E-24 T 21-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VFU_RS03405 1c374090fd0fe0a71f780c050d9e8fb6 330 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 246 309 5.6E-24 T 21-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VFU_RS03405 1c374090fd0fe0a71f780c050d9e8fb6 330 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 317 4.8E-112 T 21-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VFU_RS11455 a9f0109c633c764a67e7747901b5c79b 404 SMART SM00052 2 195 0.0074 T 21-04-2016 IPR001633 EAL domain VFU_RS11455 a9f0109c633c764a67e7747901b5c79b 404 Gene3D G3DSA:3.20.20.450 80 181 1.2E-10 T 21-04-2016 IPR001633 EAL domain VFU_RS11455 a9f0109c633c764a67e7747901b5c79b 404 SUPERFAMILY SSF109604 181 399 1.48E-42 T 21-04-2016 VFU_RS11455 a9f0109c633c764a67e7747901b5c79b 404 Gene3D G3DSA:1.10.3150.10 182 399 2.1E-33 T 21-04-2016 IPR013976 Metal-dependent hydrolase HDOD VFU_RS11455 a9f0109c633c764a67e7747901b5c79b 404 SUPERFAMILY SSF141868 5 191 7.98E-28 T 21-04-2016 IPR001633 EAL domain VFU_RS11455 a9f0109c633c764a67e7747901b5c79b 404 PIRSF PIRSF003180 1 403 5.5E-164 T 21-04-2016 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing VFU_RS11455 a9f0109c633c764a67e7747901b5c79b 404 PANTHER PTHR33525 3 385 4.5E-137 T 21-04-2016 VFU_RS11455 a9f0109c633c764a67e7747901b5c79b 404 Pfam PF00563 EAL domain 72 190 2.1E-12 T 21-04-2016 IPR001633 EAL domain VFU_RS11455 a9f0109c633c764a67e7747901b5c79b 404 PANTHER PTHR33525:SF4 3 385 4.5E-137 T 21-04-2016 VFU_RS11455 a9f0109c633c764a67e7747901b5c79b 404 Pfam PF08668 HDOD domain 205 319 2.5E-14 T 21-04-2016 IPR013976 Metal-dependent hydrolase HDOD VFU_RS12970 ddd20ce5c28bce2a085fe64e3965cea8 478 Pfam PF02378 Phosphotransferase system, EIIC 116 408 1.8E-31 T 21-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VFU_RS12970 ddd20ce5c28bce2a085fe64e3965cea8 478 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 34 115 3.9E-14 T 21-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VFU_RS12970 ddd20ce5c28bce2a085fe64e3965cea8 478 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 25 42 - T 21-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VFU_RS12970 ddd20ce5c28bce2a085fe64e3965cea8 478 SUPERFAMILY SSF55604 14 86 1.7E-20 T 21-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VFU_RS12970 ddd20ce5c28bce2a085fe64e3965cea8 478 Gene3D G3DSA:3.30.1360.60 10 87 6.7E-24 T 21-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VFU_RS12970 ddd20ce5c28bce2a085fe64e3965cea8 478 Pfam PF00367 phosphotransferase system, EIIB 15 47 7.7E-14 T 21-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VFU_RS12970 ddd20ce5c28bce2a085fe64e3965cea8 478 PANTHER PTHR30175 2 478 2.4E-260 T 21-04-2016 VFU_RS12970 ddd20ce5c28bce2a085fe64e3965cea8 478 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 10 465 4.8E-206 T 21-04-2016 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 VFU_RS12970 ddd20ce5c28bce2a085fe64e3965cea8 478 PANTHER PTHR30175:SF4 2 478 2.4E-260 T 21-04-2016 VFU_RS05930 7a6c2cf5c789bbffa820142e3c0492d0 580 PANTHER PTHR30046 30 580 4.8E-189 T 21-04-2016 VFU_RS05930 7a6c2cf5c789bbffa820142e3c0492d0 580 PIRSF PIRSF004862 29 580 3.4E-160 T 21-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VFU_RS05930 7a6c2cf5c789bbffa820142e3c0492d0 580 PRINTS PR01009 Flagellar M-ring protein signature 295 313 8.4E-23 T 21-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VFU_RS05930 7a6c2cf5c789bbffa820142e3c0492d0 580 PRINTS PR01009 Flagellar M-ring protein signature 375 399 8.4E-23 T 21-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VFU_RS05930 7a6c2cf5c789bbffa820142e3c0492d0 580 PRINTS PR01009 Flagellar M-ring protein signature 150 168 8.4E-23 T 21-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VFU_RS05930 7a6c2cf5c789bbffa820142e3c0492d0 580 PRINTS PR01009 Flagellar M-ring protein signature 182 196 8.4E-23 T 21-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VFU_RS05930 7a6c2cf5c789bbffa820142e3c0492d0 580 PRINTS PR01009 Flagellar M-ring protein signature 225 243 8.4E-23 T 21-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VFU_RS05930 7a6c2cf5c789bbffa820142e3c0492d0 580 Pfam PF01514 Secretory protein of YscJ/FliF family 63 249 3.6E-55 T 21-04-2016 IPR006182 Secretory protein YscJ/FliF VFU_RS05930 7a6c2cf5c789bbffa820142e3c0492d0 580 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 53 579 5.4E-76 T 21-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VFU_RS05930 7a6c2cf5c789bbffa820142e3c0492d0 580 Pfam PF08345 Flagellar M-ring protein C-terminal 282 452 1.3E-40 T 21-04-2016 IPR013556 Flagellar M-ring C-terminal VFU_RS05930 7a6c2cf5c789bbffa820142e3c0492d0 580 PANTHER PTHR30046:SF0 30 580 4.8E-189 T 21-04-2016 VFU_RS08450 516ff19367a2a674be0bd6a1a508e908 377 Gene3D G3DSA:2.40.37.10 236 348 1.1E-13 T 21-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 VFU_RS08450 516ff19367a2a674be0bd6a1a508e908 377 SUPERFAMILY SSF51419 14 241 8.94E-41 T 21-04-2016 IPR029066 PLP-binding barrel VFU_RS08450 516ff19367a2a674be0bd6a1a508e908 377 PIRSF PIRSF038941 1 372 3.2E-127 T 21-04-2016 IPR005730 Carboxynorspermidine decarboxylase KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 VFU_RS08450 516ff19367a2a674be0bd6a1a508e908 377 Gene3D G3DSA:3.20.20.10 32 235 7.2E-17 T 21-04-2016 IPR029066 PLP-binding barrel VFU_RS08450 516ff19367a2a674be0bd6a1a508e908 377 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 248 348 1.4E-4 T 21-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 VFU_RS08450 516ff19367a2a674be0bd6a1a508e908 377 PANTHER PTHR11482 1 377 1.2E-189 T 21-04-2016 VFU_RS08450 516ff19367a2a674be0bd6a1a508e908 377 PANTHER PTHR11482:SF38 1 377 1.2E-189 T 21-04-2016 VFU_RS08450 516ff19367a2a674be0bd6a1a508e908 377 SUPERFAMILY SSF50621 212 359 1.51E-22 T 21-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 VFU_RS08450 516ff19367a2a674be0bd6a1a508e908 377 TIGRFAM TIGR01047 nspC: carboxynorspermidine decarboxylase 6 370 6.5E-164 T 21-04-2016 IPR005730 Carboxynorspermidine decarboxylase KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 VFU_RS15100 1451ef5901b4db5fc4abf063f913002e 489 PANTHER PTHR30001 1 489 2.9E-222 T 21-04-2016 VFU_RS15100 1451ef5901b4db5fc4abf063f913002e 489 Gene3D G3DSA:2.40.50.140 30 128 4.9E-34 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS15100 1451ef5901b4db5fc4abf063f913002e 489 Pfam PF00575 S1 RNA binding domain 38 109 5.6E-6 T 21-04-2016 IPR003029 S1 domain GO:0003676 VFU_RS15100 1451ef5901b4db5fc4abf063f913002e 489 SUPERFAMILY SSF50249 39 128 1.53E-19 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS15100 1451ef5901b4db5fc4abf063f913002e 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 2.1E-172 T 21-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 VFU_RS15100 1451ef5901b4db5fc4abf063f913002e 489 Pfam PF10150 Ribonuclease E/G family 124 393 3.3E-103 T 21-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 VFU_RS15100 1451ef5901b4db5fc4abf063f913002e 489 SMART SM00316 37 122 6.5E-10 T 21-04-2016 IPR022967 RNA-binding domain, S1 VFU_RS08100 e29ee53458201d700822a69ca5f04892 579 Pfam PF02065 Melibiase 169 353 1.0E-15 T 21-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VFU_RS08100 e29ee53458201d700822a69ca5f04892 579 Gene3D G3DSA:3.20.20.70 193 489 1.2E-45 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS08100 e29ee53458201d700822a69ca5f04892 579 PANTHER PTHR22762 199 351 2.9E-16 T 21-04-2016 VFU_RS08100 e29ee53458201d700822a69ca5f04892 579 SUPERFAMILY SSF51445 195 509 3.61E-73 T 21-04-2016 IPR017853 Glycoside hydrolase superfamily VFU_RS09075 b79fbfd848626df262f62a2914d9a2c6 203 PIRSF PIRSF000498 1 203 1.8E-68 T 21-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VFU_RS09075 b79fbfd848626df262f62a2914d9a2c6 203 Pfam PF00677 Lumazine binding domain 3 87 5.1E-21 T 21-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VFU_RS09075 b79fbfd848626df262f62a2914d9a2c6 203 Pfam PF00677 Lumazine binding domain 100 184 1.9E-18 T 21-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VFU_RS09075 b79fbfd848626df262f62a2914d9a2c6 203 SUPERFAMILY SSF63380 93 198 1.87E-30 T 21-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 VFU_RS09075 b79fbfd848626df262f62a2914d9a2c6 203 PANTHER PTHR21098 1 201 5.9E-117 T 21-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VFU_RS09075 b79fbfd848626df262f62a2914d9a2c6 203 PANTHER PTHR21098:SF4 1 201 5.9E-117 T 21-04-2016 VFU_RS09075 b79fbfd848626df262f62a2914d9a2c6 203 SUPERFAMILY SSF63380 1 93 6.12E-26 T 21-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 VFU_RS09075 b79fbfd848626df262f62a2914d9a2c6 203 Gene3D G3DSA:2.40.30.20 105 198 7.8E-26 T 21-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VFU_RS09075 b79fbfd848626df262f62a2914d9a2c6 203 Gene3D G3DSA:2.40.30.20 5 104 1.1E-30 T 21-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VFU_RS09075 b79fbfd848626df262f62a2914d9a2c6 203 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 202 1.6E-74 T 21-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VFU_RS00280 c09e861126e7480286c8ca44fcfe3794 307 Hamap MF_00215 Pantothenate kinase [coaA]. 1 307 179.24 T 21-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 VFU_RS00280 c09e861126e7480286c8ca44fcfe3794 307 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 82 237 7.2E-14 T 21-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 VFU_RS00280 c09e861126e7480286c8ca44fcfe3794 307 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 3 307 5.5E-148 T 21-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 VFU_RS00280 c09e861126e7480286c8ca44fcfe3794 307 PIRSF PIRSF000545 1 307 7.0E-146 T 21-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 VFU_RS00280 c09e861126e7480286c8ca44fcfe3794 307 PANTHER PTHR10285 269 307 3.7E-155 T 21-04-2016 VFU_RS00280 c09e861126e7480286c8ca44fcfe3794 307 PANTHER PTHR10285 1 253 3.7E-155 T 21-04-2016 VFU_RS00280 c09e861126e7480286c8ca44fcfe3794 307 Gene3D G3DSA:3.40.50.300 2 307 2.4E-109 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS00280 c09e861126e7480286c8ca44fcfe3794 307 SUPERFAMILY SSF52540 3 307 2.0E-72 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS00280 c09e861126e7480286c8ca44fcfe3794 307 PANTHER PTHR10285:SF7 269 307 3.7E-155 T 21-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 VFU_RS00280 c09e861126e7480286c8ca44fcfe3794 307 PANTHER PTHR10285:SF7 1 253 3.7E-155 T 21-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 VFU_RS14080 b6384ef77b3e62674f180793177e51e5 781 Gene3D G3DSA:1.20.120.160 681 779 1.7E-32 T 21-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VFU_RS14080 b6384ef77b3e62674f180793177e51e5 781 Gene3D G3DSA:3.30.450.20 142 267 4.3E-21 T 21-04-2016 VFU_RS14080 b6384ef77b3e62674f180793177e51e5 781 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 462 7.2E-14 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS14080 b6384ef77b3e62674f180793177e51e5 781 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 488 7.2E-14 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS14080 b6384ef77b3e62674f180793177e51e5 781 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 507 7.2E-14 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS14080 b6384ef77b3e62674f180793177e51e5 781 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 448 7.2E-14 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS14080 b6384ef77b3e62674f180793177e51e5 781 SUPERFAMILY SSF47384 270 347 1.55E-16 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS14080 b6384ef77b3e62674f180793177e51e5 781 SUPERFAMILY SSF47226 669 779 1.96E-27 T 21-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VFU_RS14080 b6384ef77b3e62674f180793177e51e5 781 PIRSF PIRSF003182 1 781 0.0 T 21-04-2016 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 VFU_RS14080 b6384ef77b3e62674f180793177e51e5 781 SMART SM00448 526 637 9.2E-22 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS14080 b6384ef77b3e62674f180793177e51e5 781 SMART SM00091 155 221 1.4E-6 T 21-04-2016 IPR000014 PAS domain VFU_RS14080 b6384ef77b3e62674f180793177e51e5 781 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 276 1.3E-16 T 21-04-2016 IPR000014 PAS domain VFU_RS14080 b6384ef77b3e62674f180793177e51e5 781 SMART SM00387 394 510 9.8E-33 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS14080 b6384ef77b3e62674f180793177e51e5 781 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 506 3.8E-25 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS14080 b6384ef77b3e62674f180793177e51e5 781 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 345 6.1E-13 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS14080 b6384ef77b3e62674f180793177e51e5 781 SMART SM00073 680 777 2.5E-8 T 21-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VFU_RS14080 b6384ef77b3e62674f180793177e51e5 781 Gene3D G3DSA:3.30.565.10 355 506 7.8E-41 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS14080 b6384ef77b3e62674f180793177e51e5 781 SMART SM00388 282 347 8.4E-17 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS14080 b6384ef77b3e62674f180793177e51e5 781 Gene3D G3DSA:3.40.50.2300 515 643 2.2E-28 T 21-04-2016 VFU_RS14080 b6384ef77b3e62674f180793177e51e5 781 SUPERFAMILY SSF52172 525 643 4.13E-26 T 21-04-2016 IPR011006 CheY-like superfamily VFU_RS14080 b6384ef77b3e62674f180793177e51e5 781 SUPERFAMILY SSF55785 140 267 1.57E-22 T 21-04-2016 IPR000014 PAS domain VFU_RS14080 b6384ef77b3e62674f180793177e51e5 781 Pfam PF00989 PAS fold 157 266 6.2E-15 T 21-04-2016 IPR013767 PAS fold GO:0006355 VFU_RS14080 b6384ef77b3e62674f180793177e51e5 781 Pfam PF01627 Hpt domain 691 763 1.7E-10 T 21-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VFU_RS14080 b6384ef77b3e62674f180793177e51e5 781 Gene3D G3DSA:1.10.287.130 274 343 1.2E-16 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS14080 b6384ef77b3e62674f180793177e51e5 781 Pfam PF00072 Response regulator receiver domain 528 637 2.3E-17 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS14080 b6384ef77b3e62674f180793177e51e5 781 SUPERFAMILY SSF55874 336 506 1.05E-39 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS14080 b6384ef77b3e62674f180793177e51e5 781 PANTHER PTHR24423 153 682 0.0 T 21-04-2016 VFU_RS14080 b6384ef77b3e62674f180793177e51e5 781 PANTHER PTHR24423 20 95 0.0 T 21-04-2016 VFU_RS14080 b6384ef77b3e62674f180793177e51e5 781 Gene3D G3DSA:1.10.287.970 1 89 1.0E-38 T 21-04-2016 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain VFU_RS14080 b6384ef77b3e62674f180793177e51e5 781 PANTHER PTHR24423:SF476 153 682 0.0 T 21-04-2016 VFU_RS14080 b6384ef77b3e62674f180793177e51e5 781 PANTHER PTHR24423:SF476 20 95 0.0 T 21-04-2016 VFU_RS06410 6d526a0f8999ef5eca0e0987de32e5ca 601 PIRSF PIRSF004950 6 599 2.3E-238 T 21-04-2016 IPR012159 Inner membrane protein YejM VFU_RS06410 6d526a0f8999ef5eca0e0987de32e5ca 601 SUPERFAMILY SSF53649 256 581 2.33E-51 T 21-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VFU_RS06410 6d526a0f8999ef5eca0e0987de32e5ca 601 PANTHER PTHR10342:SF215 230 542 3.3E-100 T 21-04-2016 VFU_RS06410 6d526a0f8999ef5eca0e0987de32e5ca 601 Pfam PF00884 Sulfatase 259 514 1.1E-22 T 21-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 VFU_RS06410 6d526a0f8999ef5eca0e0987de32e5ca 601 PANTHER PTHR10342 230 542 3.3E-100 T 21-04-2016 VFU_RS06410 6d526a0f8999ef5eca0e0987de32e5ca 601 Gene3D G3DSA:3.40.720.10 259 533 3.6E-34 T 21-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VFU_RS06410 6d526a0f8999ef5eca0e0987de32e5ca 601 Pfam PF11893 Domain of unknown function (DUF3413) 6 251 3.1E-98 T 21-04-2016 IPR024588 Inner membrane protein YejM, N-terminal VFU_RS13375 615b1d7d3d85d06553b26510c3040b0f 679 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 199 355 4.7E-11 T 21-04-2016 IPR000477 Reverse transcriptase domain VFU_RS04570 70c83a9a7a773368c022bee035566419 209 PIRSF PIRSF005461 1 209 8.2E-81 T 21-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 VFU_RS04570 70c83a9a7a773368c022bee035566419 209 SUPERFAMILY SSF53335 30 209 4.18E-46 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS04570 70c83a9a7a773368c022bee035566419 209 Pfam PF01728 FtsJ-like methyltransferase 31 207 6.5E-56 T 21-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 VFU_RS04570 70c83a9a7a773368c022bee035566419 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 11 207 28.988 T 21-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 VFU_RS04570 70c83a9a7a773368c022bee035566419 209 PANTHER PTHR10920:SF20 1 209 1.3E-136 T 21-04-2016 VFU_RS04570 70c83a9a7a773368c022bee035566419 209 Gene3D G3DSA:3.40.50.150 1 208 1.5E-73 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS04570 70c83a9a7a773368c022bee035566419 209 PANTHER PTHR10920 1 209 1.3E-136 T 21-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 VFU_RS02760 d0a9e0ee931851b53068a598b55661d5 209 PANTHER PTHR26402 5 208 1.1E-94 T 21-04-2016 VFU_RS02760 d0a9e0ee931851b53068a598b55661d5 209 SUPERFAMILY SSF46894 141 206 8.84E-20 T 21-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VFU_RS02760 d0a9e0ee931851b53068a598b55661d5 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VFU_RS02760 d0a9e0ee931851b53068a598b55661d5 209 SUPERFAMILY SSF52172 4 163 9.53E-26 T 21-04-2016 IPR011006 CheY-like superfamily VFU_RS02760 d0a9e0ee931851b53068a598b55661d5 209 Gene3D G3DSA:3.40.50.2300 4 131 9.0E-29 T 21-04-2016 VFU_RS02760 d0a9e0ee931851b53068a598b55661d5 209 PANTHER PTHR26402:SF474 5 208 1.1E-94 T 21-04-2016 VFU_RS02760 d0a9e0ee931851b53068a598b55661d5 209 Pfam PF00072 Response regulator receiver domain 7 120 4.0E-22 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS02760 d0a9e0ee931851b53068a598b55661d5 209 SMART SM00448 5 119 5.5E-20 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS02760 d0a9e0ee931851b53068a598b55661d5 209 Gene3D G3DSA:1.10.10.10 142 206 1.2E-23 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS02760 d0a9e0ee931851b53068a598b55661d5 209 SMART SM00421 147 204 7.3E-23 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VFU_RS02760 d0a9e0ee931851b53068a598b55661d5 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 8.3E-20 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VFU_RS02760 d0a9e0ee931851b53068a598b55661d5 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 3.6E-11 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VFU_RS02760 d0a9e0ee931851b53068a598b55661d5 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 3.6E-11 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VFU_RS02760 d0a9e0ee931851b53068a598b55661d5 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 3.6E-11 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VFU_RS09225 48d389a6510ff2b41c17b78db58a56c3 245 Pfam PF02146 Sir2 family 13 186 4.2E-50 T 21-04-2016 IPR003000 Sirtuin family GO:0070403 VFU_RS09225 48d389a6510ff2b41c17b78db58a56c3 245 Gene3D G3DSA:3.40.50.1220 6 21 2.9E-41 T 21-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VFU_RS09225 48d389a6510ff2b41c17b78db58a56c3 245 Gene3D G3DSA:3.40.50.1220 71 113 2.9E-41 T 21-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VFU_RS09225 48d389a6510ff2b41c17b78db58a56c3 245 Gene3D G3DSA:3.40.50.1220 165 231 2.9E-41 T 21-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VFU_RS09225 48d389a6510ff2b41c17b78db58a56c3 245 Gene3D G3DSA:3.30.1600.10 22 61 1.1E-27 T 21-04-2016 IPR026591 Sirtuin family, catalytic core small domain VFU_RS09225 48d389a6510ff2b41c17b78db58a56c3 245 Gene3D G3DSA:3.30.1600.10 114 158 1.1E-27 T 21-04-2016 IPR026591 Sirtuin family, catalytic core small domain VFU_RS09225 48d389a6510ff2b41c17b78db58a56c3 245 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 6 236 56.657 T 21-04-2016 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 VFU_RS09225 48d389a6510ff2b41c17b78db58a56c3 245 SUPERFAMILY SSF52467 6 234 1.16E-72 T 21-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VFU_RS09225 48d389a6510ff2b41c17b78db58a56c3 245 PANTHER PTHR11085:SF17 6 234 6.6E-78 T 21-04-2016 VFU_RS09225 48d389a6510ff2b41c17b78db58a56c3 245 PANTHER PTHR11085 6 234 6.6E-78 T 21-04-2016 IPR003000 Sirtuin family GO:0070403 VFU_RS04100 fd4fcced660aba2da9b507d8ea61bf35 298 ProSitePatterns PS00761 Signal peptidases I signature 3. 236 249 - T 21-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 VFU_RS04100 fd4fcced660aba2da9b507d8ea61bf35 298 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 79 95 7.1E-27 T 21-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VFU_RS04100 fd4fcced660aba2da9b507d8ea61bf35 298 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 231 250 7.1E-27 T 21-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VFU_RS04100 fd4fcced660aba2da9b507d8ea61bf35 298 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 143 155 7.1E-27 T 21-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VFU_RS04100 fd4fcced660aba2da9b507d8ea61bf35 298 SUPERFAMILY SSF51306 77 296 6.8E-71 T 21-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C VFU_RS04100 fd4fcced660aba2da9b507d8ea61bf35 298 Gene3D G3DSA:2.170.230.10 153 230 9.1E-20 T 21-04-2016 IPR019766 Peptidase S26A, all-beta subdomain VFU_RS04100 fd4fcced660aba2da9b507d8ea61bf35 298 PANTHER PTHR12383:SF27 213 275 1.4E-105 T 21-04-2016 VFU_RS04100 fd4fcced660aba2da9b507d8ea61bf35 298 PANTHER PTHR12383:SF27 3 190 1.4E-105 T 21-04-2016 VFU_RS04100 fd4fcced660aba2da9b507d8ea61bf35 298 Gene3D G3DSA:2.10.109.10 75 152 4.0E-56 T 21-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain VFU_RS04100 fd4fcced660aba2da9b507d8ea61bf35 298 Gene3D G3DSA:2.10.109.10 231 273 4.0E-56 T 21-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain VFU_RS04100 fd4fcced660aba2da9b507d8ea61bf35 298 Pfam PF00717 Peptidase S24-like 85 160 4.2E-22 T 21-04-2016 IPR019759 Peptidase S24/S26A/S26B VFU_RS04100 fd4fcced660aba2da9b507d8ea61bf35 298 ProSitePatterns PS00760 Signal peptidases I lysine active site. 145 157 - T 21-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 VFU_RS04100 fd4fcced660aba2da9b507d8ea61bf35 298 ProSitePatterns PS00501 Signal peptidases I serine active site. 88 95 - T 21-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 VFU_RS04100 fd4fcced660aba2da9b507d8ea61bf35 298 Pfam PF10502 Signal peptidase, peptidase S26 228 268 1.5E-6 T 21-04-2016 IPR019533 Peptidase S26 VFU_RS04100 fd4fcced660aba2da9b507d8ea61bf35 298 PANTHER PTHR12383 213 275 1.4E-105 T 21-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VFU_RS04100 fd4fcced660aba2da9b507d8ea61bf35 298 PANTHER PTHR12383 3 190 1.4E-105 T 21-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VFU_RS04100 fd4fcced660aba2da9b507d8ea61bf35 298 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 64 271 7.5E-48 T 21-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VFU_RS05360 fca5c9c507ce90e8bafc2d2c6636def4 520 Pfam PF01476 LysM domain 338 380 1.6E-10 T 21-04-2016 IPR018392 LysM domain VFU_RS05360 fca5c9c507ce90e8bafc2d2c6636def4 520 Pfam PF01476 LysM domain 469 510 2.3E-11 T 21-04-2016 IPR018392 LysM domain VFU_RS05360 fca5c9c507ce90e8bafc2d2c6636def4 520 Pfam PF01476 LysM domain 412 454 1.6E-12 T 21-04-2016 IPR018392 LysM domain VFU_RS05360 fca5c9c507ce90e8bafc2d2c6636def4 520 SUPERFAMILY SSF53955 105 255 3.83E-41 T 21-04-2016 IPR023346 Lysozyme-like domain VFU_RS05360 fca5c9c507ce90e8bafc2d2c6636def4 520 SUPERFAMILY SSF54106 336 380 1.18E-10 T 21-04-2016 IPR018392 LysM domain VFU_RS05360 fca5c9c507ce90e8bafc2d2c6636def4 520 SUPERFAMILY SSF54106 410 455 1.01E-11 T 21-04-2016 IPR018392 LysM domain VFU_RS05360 fca5c9c507ce90e8bafc2d2c6636def4 520 Gene3D G3DSA:1.10.530.10 102 264 1.2E-45 T 21-04-2016 VFU_RS05360 fca5c9c507ce90e8bafc2d2c6636def4 520 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 127 155 - T 21-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VFU_RS05360 fca5c9c507ce90e8bafc2d2c6636def4 520 PANTHER PTHR21666:SF203 57 494 9.4E-206 T 21-04-2016 VFU_RS05360 fca5c9c507ce90e8bafc2d2c6636def4 520 Gene3D G3DSA:3.10.350.10 336 381 1.2E-15 T 21-04-2016 IPR018392 LysM domain VFU_RS05360 fca5c9c507ce90e8bafc2d2c6636def4 520 Gene3D G3DSA:3.10.350.10 411 456 1.8E-18 T 21-04-2016 IPR018392 LysM domain VFU_RS05360 fca5c9c507ce90e8bafc2d2c6636def4 520 Gene3D G3DSA:3.10.350.10 466 512 1.3E-15 T 21-04-2016 IPR018392 LysM domain VFU_RS05360 fca5c9c507ce90e8bafc2d2c6636def4 520 PANTHER PTHR21666 57 494 9.4E-206 T 21-04-2016 VFU_RS05360 fca5c9c507ce90e8bafc2d2c6636def4 520 Pfam PF01464 Transglycosylase SLT domain 119 220 1.2E-21 T 21-04-2016 IPR008258 Transglycosylase SLT domain 1 VFU_RS05360 fca5c9c507ce90e8bafc2d2c6636def4 520 SUPERFAMILY SSF54106 467 512 6.41E-11 T 21-04-2016 IPR018392 LysM domain VFU_RS05360 fca5c9c507ce90e8bafc2d2c6636def4 520 SMART SM00257 337 380 2.2E-11 T 21-04-2016 IPR018392 LysM domain VFU_RS05360 fca5c9c507ce90e8bafc2d2c6636def4 520 SMART SM00257 411 455 9.7E-15 T 21-04-2016 IPR018392 LysM domain VFU_RS05360 fca5c9c507ce90e8bafc2d2c6636def4 520 SMART SM00257 468 512 3.9E-9 T 21-04-2016 IPR018392 LysM domain VFU_RS11760 4cf4ab303eca537003a6248c562aa5fe 226 Gene3D G3DSA:3.40.50.300 6 221 5.3E-77 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS11760 4cf4ab303eca537003a6248c562aa5fe 226 Pfam PF02224 Cytidylate kinase 8 221 2.8E-78 T 21-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 VFU_RS11760 4cf4ab303eca537003a6248c562aa5fe 226 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 34.832 T 21-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 VFU_RS11760 4cf4ab303eca537003a6248c562aa5fe 226 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 6.2E-86 T 21-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 VFU_RS11760 4cf4ab303eca537003a6248c562aa5fe 226 PANTHER PTHR21299 6 225 8.9E-80 T 21-04-2016 VFU_RS11760 4cf4ab303eca537003a6248c562aa5fe 226 SUPERFAMILY SSF52540 6 223 4.67E-46 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS01595 55a2341623a049d11c8b0cee844d918c 416 Pfam PF00155 Aminotransferase class I and II 69 396 6.6E-25 T 21-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VFU_RS01595 55a2341623a049d11c8b0cee844d918c 416 Gene3D G3DSA:3.90.1150.10 267 410 2.2E-16 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VFU_RS01595 55a2341623a049d11c8b0cee844d918c 416 PANTHER PTHR11751:SF419 11 413 1.2E-179 T 21-04-2016 VFU_RS01595 55a2341623a049d11c8b0cee844d918c 416 PANTHER PTHR11751 11 413 1.2E-179 T 21-04-2016 VFU_RS01595 55a2341623a049d11c8b0cee844d918c 416 SUPERFAMILY SSF53383 13 411 1.27E-59 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VFU_RS01595 55a2341623a049d11c8b0cee844d918c 416 Gene3D G3DSA:3.40.640.10 67 266 2.1E-39 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VFU_RS00390 df3f0a260a798c3b16897313bbb2088f 212 PANTHER PTHR30231:SF7 1 204 2.9E-109 T 21-04-2016 VFU_RS00390 df3f0a260a798c3b16897313bbb2088f 212 PANTHER PTHR30231 1 204 2.9E-109 T 21-04-2016 VFU_RS00390 df3f0a260a798c3b16897313bbb2088f 212 Pfam PF00929 Exonuclease 31 193 1.2E-19 T 21-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VFU_RS00390 df3f0a260a798c3b16897313bbb2088f 212 Gene3D G3DSA:3.30.420.10 26 199 8.8E-36 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VFU_RS00390 df3f0a260a798c3b16897313bbb2088f 212 SMART SM00479 29 202 2.5E-27 T 21-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VFU_RS00390 df3f0a260a798c3b16897313bbb2088f 212 SUPERFAMILY SSF53098 27 198 7.12E-35 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VFU_RS08995 971a2489df1e0c043e5dd1cc24a6ec98 293 SUPERFAMILY SSF161098 55 282 2.62E-40 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS08995 971a2489df1e0c043e5dd1cc24a6ec98 293 Gene3D G3DSA:1.10.3720.10 61 290 6.7E-40 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS08995 971a2489df1e0c043e5dd1cc24a6ec98 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 129 292 5.0E-12 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS08995 971a2489df1e0c043e5dd1cc24a6ec98 293 PANTHER PTHR32243 4 292 1.5E-98 T 21-04-2016 VFU_RS08995 971a2489df1e0c043e5dd1cc24a6ec98 293 PANTHER PTHR32243:SF13 4 292 1.5E-98 T 21-04-2016 VFU_RS15190 bcdccdb0bdb3e460beb280e9baaa3be9 547 SMART SM00965 93 141 1.0E-6 T 21-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 VFU_RS15190 bcdccdb0bdb3e460beb280e9baaa3be9 547 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 240 523 3.6E-93 T 21-04-2016 IPR013358 Pilus biogenesis, MshL VFU_RS15190 bcdccdb0bdb3e460beb280e9baaa3be9 547 PANTHER PTHR30332:SF8 182 545 3.8E-81 T 21-04-2016 VFU_RS15190 bcdccdb0bdb3e460beb280e9baaa3be9 547 PRINTS PR00811 Bacterial general secretion pathway protein D signature 343 367 2.4E-18 T 21-04-2016 IPR001775 GspD/PilQ family VFU_RS15190 bcdccdb0bdb3e460beb280e9baaa3be9 547 PRINTS PR00811 Bacterial general secretion pathway protein D signature 488 506 2.4E-18 T 21-04-2016 IPR001775 GspD/PilQ family VFU_RS15190 bcdccdb0bdb3e460beb280e9baaa3be9 547 PRINTS PR00811 Bacterial general secretion pathway protein D signature 511 525 2.4E-18 T 21-04-2016 IPR001775 GspD/PilQ family VFU_RS15190 bcdccdb0bdb3e460beb280e9baaa3be9 547 PRINTS PR00811 Bacterial general secretion pathway protein D signature 274 284 2.4E-18 T 21-04-2016 IPR001775 GspD/PilQ family VFU_RS15190 bcdccdb0bdb3e460beb280e9baaa3be9 547 Pfam PF07655 Secretin N-terminal domain 145 245 6.7E-25 T 21-04-2016 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 VFU_RS15190 bcdccdb0bdb3e460beb280e9baaa3be9 547 PANTHER PTHR30332 182 545 3.8E-81 T 21-04-2016 VFU_RS15190 bcdccdb0bdb3e460beb280e9baaa3be9 547 Pfam PF00263 Bacterial type II and III secretion system protein 348 523 4.2E-42 T 21-04-2016 IPR004846 Type II/III secretion system GO:0009306 VFU_RS02035 141820735c0eef2a8077befb1dea3897 395 SUPERFAMILY SSF51905 1 189 8.31E-56 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS02035 141820735c0eef2a8077befb1dea3897 395 SUPERFAMILY SSF51905 338 394 8.31E-56 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS02035 141820735c0eef2a8077befb1dea3897 395 Gene3D G3DSA:3.50.50.60 2 187 4.8E-47 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS02035 141820735c0eef2a8077befb1dea3897 395 Gene3D G3DSA:3.50.50.60 340 393 4.8E-47 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS02035 141820735c0eef2a8077befb1dea3897 395 Gene3D G3DSA:2.40.30.10 190 270 1.3E-28 T 21-04-2016 VFU_RS02035 141820735c0eef2a8077befb1dea3897 395 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 393 1.9E-128 T 21-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like VFU_RS02035 141820735c0eef2a8077befb1dea3897 395 Gene3D G3DSA:1.10.8.260 271 323 2.4E-24 T 21-04-2016 IPR023166 HI0933 insert-like domain VFU_RS02035 141820735c0eef2a8077befb1dea3897 395 PANTHER PTHR10617:SF103 1 287 6.8E-131 T 21-04-2016 VFU_RS02035 141820735c0eef2a8077befb1dea3897 395 PANTHER PTHR10617:SF103 331 395 6.8E-131 T 21-04-2016 VFU_RS02035 141820735c0eef2a8077befb1dea3897 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 363 370 4.7E-8 T 21-04-2016 VFU_RS02035 141820735c0eef2a8077befb1dea3897 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 156 165 4.7E-8 T 21-04-2016 VFU_RS02035 141820735c0eef2a8077befb1dea3897 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 4.7E-8 T 21-04-2016 VFU_RS02035 141820735c0eef2a8077befb1dea3897 395 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 1.76E-5 T 21-04-2016 VFU_RS02035 141820735c0eef2a8077befb1dea3897 395 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.76E-5 T 21-04-2016 VFU_RS02035 141820735c0eef2a8077befb1dea3897 395 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 348 370 1.76E-5 T 21-04-2016 VFU_RS02035 141820735c0eef2a8077befb1dea3897 395 SUPERFAMILY SSF160996 191 339 3.01E-44 T 21-04-2016 VFU_RS02035 141820735c0eef2a8077befb1dea3897 395 Pfam PF03486 HI0933-like protein 6 393 1.1E-154 T 21-04-2016 VFU_RS02035 141820735c0eef2a8077befb1dea3897 395 PANTHER PTHR10617 1 287 6.8E-131 T 21-04-2016 VFU_RS02035 141820735c0eef2a8077befb1dea3897 395 PANTHER PTHR10617 331 395 6.8E-131 T 21-04-2016 VFU_RS01110 1f6eae993f05bb2a829f2a50956ba346 162 PANTHER PTHR38596 1 162 1.6E-90 T 21-04-2016 VFU_RS01110 1f6eae993f05bb2a829f2a50956ba346 162 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 162 83.252 T 21-04-2016 IPR020765 Uncharacterised protein family UPF0114, gammaproteobacteria GO:0005886 VFU_RS01110 1f6eae993f05bb2a829f2a50956ba346 162 Pfam PF03350 Uncharacterized protein family, UPF0114 9 125 3.9E-33 T 21-04-2016 IPR005134 Uncharacterised protein family UPF0114 VFU_RS01110 1f6eae993f05bb2a829f2a50956ba346 162 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 1 161 1.2E-65 T 21-04-2016 IPR020761 Uncharacterised protein family UPF0114, bacteria VFU_RS01110 1f6eae993f05bb2a829f2a50956ba346 162 PANTHER PTHR38596:SF1 1 162 1.6E-90 T 21-04-2016 VFU_RS03135 b4c82a90589b7af865dddba69fefddd4 361 Gene3D G3DSA:1.20.1090.10 172 355 1.3E-68 T 21-04-2016 VFU_RS03135 b4c82a90589b7af865dddba69fefddd4 361 Pfam PF01761 3-dehydroquinate synthase 67 324 1.3E-113 T 21-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 VFU_RS03135 b4c82a90589b7af865dddba69fefddd4 361 SUPERFAMILY SSF56796 4 355 1.96E-119 T 21-04-2016 VFU_RS03135 b4c82a90589b7af865dddba69fefddd4 361 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 353 6.1E-123 T 21-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 VFU_RS03135 b4c82a90589b7af865dddba69fefddd4 361 Gene3D G3DSA:3.40.50.1970 2 171 1.1E-68 T 21-04-2016 VFU_RS03135 b4c82a90589b7af865dddba69fefddd4 361 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 357 43.706 T 21-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 VFU_RS03135 b4c82a90589b7af865dddba69fefddd4 361 PANTHER PTHR21090 1 359 6.0E-204 T 21-04-2016 VFU_RS03135 b4c82a90589b7af865dddba69fefddd4 361 PIRSF PIRSF001455 7 358 7.0E-110 T 21-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 VFU_RS01130 337b87974f89c98aa0467913993033c4 702 Gene3D G3DSA:2.170.130.10 37 172 6.8E-36 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 VFU_RS01130 337b87974f89c98aa0467913993033c4 702 Pfam PF00593 TonB dependent receptor 472 701 1.0E-29 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 VFU_RS01130 337b87974f89c98aa0467913993033c4 702 PANTHER PTHR32552 1 702 5.6E-227 T 21-04-2016 VFU_RS01130 337b87974f89c98aa0467913993033c4 702 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 65 701 6.8E-103 T 21-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 VFU_RS01130 337b87974f89c98aa0467913993033c4 702 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 52 - T 21-04-2016 IPR010916 TonB box, conserved site VFU_RS01130 337b87974f89c98aa0467913993033c4 702 Gene3D G3DSA:2.40.170.20 175 702 1.1E-137 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 VFU_RS01130 337b87974f89c98aa0467913993033c4 702 PANTHER PTHR32552:SF17 1 702 5.6E-227 T 21-04-2016 VFU_RS01130 337b87974f89c98aa0467913993033c4 702 Pfam PF07715 TonB-dependent Receptor Plug Domain 62 162 1.5E-17 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 VFU_RS01130 337b87974f89c98aa0467913993033c4 702 SUPERFAMILY SSF56935 38 702 1.08E-130 T 21-04-2016 VFU_RS08825 82a39827b3cd67ecd977c9c09431d8cc 502 SUPERFAMILY SSF52540 8 231 3.48E-53 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS08825 82a39827b3cd67ecd977c9c09431d8cc 502 PANTHER PTHR24220:SF303 11 384 6.1E-283 T 21-04-2016 VFU_RS08825 82a39827b3cd67ecd977c9c09431d8cc 502 Pfam PF00005 ABC transporter 276 430 1.5E-18 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS08825 82a39827b3cd67ecd977c9c09431d8cc 502 Pfam PF00005 ABC transporter 25 174 5.0E-27 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS08825 82a39827b3cd67ecd977c9c09431d8cc 502 Gene3D G3DSA:3.40.50.300 7 232 1.7E-58 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS08825 82a39827b3cd67ecd977c9c09431d8cc 502 Gene3D G3DSA:3.40.50.300 258 494 3.6E-44 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS08825 82a39827b3cd67ecd977c9c09431d8cc 502 SMART SM00382 34 229 4.5E-7 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS08825 82a39827b3cd67ecd977c9c09431d8cc 502 SMART SM00382 284 479 2.6 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS08825 82a39827b3cd67ecd977c9c09431d8cc 502 ProSitePatterns PS00211 ABC transporters family signature. 403 417 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS08825 82a39827b3cd67ecd977c9c09431d8cc 502 PANTHER PTHR24220 11 384 6.1E-283 T 21-04-2016 VFU_RS08825 82a39827b3cd67ecd977c9c09431d8cc 502 SUPERFAMILY SSF52540 244 491 8.62E-41 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS04965 c41fbe4367eaffb26ac9f890a7a8a930 274 PANTHER PTHR24220:SF589 6 229 3.4E-95 T 21-04-2016 VFU_RS04965 c41fbe4367eaffb26ac9f890a7a8a930 274 SMART SM00382 33 215 3.7E-19 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS04965 c41fbe4367eaffb26ac9f890a7a8a930 274 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS04965 c41fbe4367eaffb26ac9f890a7a8a930 274 PANTHER PTHR24220 6 229 3.4E-95 T 21-04-2016 VFU_RS04965 c41fbe4367eaffb26ac9f890a7a8a930 274 Pfam PF00005 ABC transporter 24 164 4.5E-36 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS04965 c41fbe4367eaffb26ac9f890a7a8a930 274 Gene3D G3DSA:3.40.50.300 2 210 6.4E-66 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS04965 c41fbe4367eaffb26ac9f890a7a8a930 274 SUPERFAMILY SSF52540 5 234 1.82E-66 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS03050 91dffc1b6e7f11d572a52030d143c554 179 SUPERFAMILY SSF46785 3 178 1.84E-44 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS03050 91dffc1b6e7f11d572a52030d143c554 179 Gene3D G3DSA:1.10.10.10 1 87 2.4E-28 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS03050 91dffc1b6e7f11d572a52030d143c554 179 Pfam PF10400 Virulence activator alpha C-term 92 176 3.8E-14 T 21-04-2016 IPR018309 Transcription regulator PadR, C-terminal VFU_RS03050 91dffc1b6e7f11d572a52030d143c554 179 Pfam PF03551 Transcriptional regulator PadR-like family 7 80 4.1E-15 T 21-04-2016 IPR005149 Transcription regulator PadR, N-terminal VFU_RS03050 91dffc1b6e7f11d572a52030d143c554 179 PANTHER PTHR33169:SF4 1 178 1.8E-70 T 21-04-2016 VFU_RS03050 91dffc1b6e7f11d572a52030d143c554 179 PANTHER PTHR33169 1 178 1.8E-70 T 21-04-2016 VFU_RS12515 3bc633c54655b6086ba525645bf7a5d8 467 PANTHER PTHR32071 13 464 2.1E-221 T 21-04-2016 VFU_RS12515 3bc633c54655b6086ba525645bf7a5d8 467 SUPERFAMILY SSF52172 13 191 6.4E-40 T 21-04-2016 IPR011006 CheY-like superfamily VFU_RS12515 3bc633c54655b6086ba525645bf7a5d8 467 Pfam PF00072 Response regulator receiver domain 14 122 3.7E-25 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS12515 3bc633c54655b6086ba525645bf7a5d8 467 SMART SM00382 167 310 4.7E-9 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS12515 3bc633c54655b6086ba525645bf7a5d8 467 Gene3D G3DSA:3.40.50.2300 12 135 1.1E-34 T 21-04-2016 VFU_RS12515 3bc633c54655b6086ba525645bf7a5d8 467 SMART SM00448 11 122 1.3E-29 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS12515 3bc633c54655b6086ba525645bf7a5d8 467 Gene3D G3DSA:1.10.8.60 320 392 6.8E-20 T 21-04-2016 VFU_RS12515 3bc633c54655b6086ba525645bf7a5d8 467 PANTHER PTHR32071:SF33 13 464 2.1E-221 T 21-04-2016 VFU_RS12515 3bc633c54655b6086ba525645bf7a5d8 467 Pfam PF00158 Sigma-54 interaction domain 148 313 4.4E-68 T 21-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VFU_RS12515 3bc633c54655b6086ba525645bf7a5d8 467 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 233 248 - T 21-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VFU_RS12515 3bc633c54655b6086ba525645bf7a5d8 467 Gene3D G3DSA:3.40.50.300 144 319 8.1E-58 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS12515 3bc633c54655b6086ba525645bf7a5d8 467 SUPERFAMILY SSF52540 147 389 8.19E-68 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS12515 3bc633c54655b6086ba525645bf7a5d8 467 Pfam PF02954 Bacterial regulatory protein, Fis family 418 456 3.9E-12 T 21-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VFU_RS12515 3bc633c54655b6086ba525645bf7a5d8 467 Gene3D G3DSA:1.10.10.60 413 456 1.0E-11 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS12515 3bc633c54655b6086ba525645bf7a5d8 467 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 360 369 - T 21-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VFU_RS12515 3bc633c54655b6086ba525645bf7a5d8 467 SUPERFAMILY SSF46689 406 459 3.55E-9 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS12195 139213dd5b1630cfec2251b23b8f0fb3 161 Pfam PF06891 P2 phage tail completion protein R (GpR) 9 142 4.0E-28 T 21-04-2016 IPR009678 Bacteriophage tail completion protein R VFU_RS11955 cf76b31e75173acb16b6478b404f023e 401 PANTHER PTHR10590 3 398 1.0E-186 T 21-04-2016 IPR008276 Concentrative nucleoside transporter GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 VFU_RS11955 cf76b31e75173acb16b6478b404f023e 401 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 191 398 4.7E-72 T 21-04-2016 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 VFU_RS11955 cf76b31e75173acb16b6478b404f023e 401 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 5 78 3.1E-25 T 21-04-2016 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 VFU_RS11955 cf76b31e75173acb16b6478b404f023e 401 Pfam PF07670 Nucleoside recognition 89 184 1.2E-6 T 21-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 VFU_RS11955 cf76b31e75173acb16b6478b404f023e 401 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 1 397 1.5E-136 T 21-04-2016 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 VFU_RS15325 ef5e64cae047941cf00426c8ba62305c 149 Gene3D G3DSA:1.10.10.10 11 82 1.7E-15 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS15325 ef5e64cae047941cf00426c8ba62305c 149 PANTHER PTHR33202 7 149 3.8E-68 T 21-04-2016 VFU_RS15325 ef5e64cae047941cf00426c8ba62305c 149 Pfam PF01475 Ferric uptake regulator family 20 138 8.7E-21 T 21-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 VFU_RS15325 ef5e64cae047941cf00426c8ba62305c 149 PANTHER PTHR33202:SF6 7 149 3.8E-68 T 21-04-2016 VFU_RS15325 ef5e64cae047941cf00426c8ba62305c 149 SUPERFAMILY SSF46785 12 144 6.41E-35 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS10720 2b78c5dca17fbff71287a75f50400734 408 Gene3D G3DSA:3.40.640.10 36 269 4.6E-63 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VFU_RS10720 2b78c5dca17fbff71287a75f50400734 408 TIGRFAM TIGR01976 am_tr_V_VC1184: cysteine desulfurase family protein 3 405 1.8E-163 T 21-04-2016 IPR011340 Cysteine desulfurase-related VFU_RS10720 2b78c5dca17fbff71287a75f50400734 408 PANTHER PTHR11601 1 408 2.6E-144 T 21-04-2016 VFU_RS10720 2b78c5dca17fbff71287a75f50400734 408 SUPERFAMILY SSF53383 5 407 2.15E-96 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VFU_RS10720 2b78c5dca17fbff71287a75f50400734 408 PANTHER PTHR11601:SF22 1 408 2.6E-144 T 21-04-2016 VFU_RS10720 2b78c5dca17fbff71287a75f50400734 408 Gene3D G3DSA:3.90.1150.10 270 407 1.0E-37 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VFU_RS10720 2b78c5dca17fbff71287a75f50400734 408 Pfam PF00266 Aminotransferase class-V 25 401 2.4E-72 T 21-04-2016 IPR000192 Aminotransferase class V domain VFU_RS10185 7f505c49ec1a63816536934165224e8c 421 PANTHER PTHR38762 1 421 2.0E-137 T 21-04-2016 VFU_RS10185 7f505c49ec1a63816536934165224e8c 421 Pfam PF02264 LamB porin 24 421 9.4E-111 T 21-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 VFU_RS10185 7f505c49ec1a63816536934165224e8c 421 SUPERFAMILY SSF56935 22 421 8.7E-106 T 21-04-2016 VFU_RS10185 7f505c49ec1a63816536934165224e8c 421 Gene3D G3DSA:2.40.170.10 22 421 4.4E-123 T 21-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 VFU_RS10185 7f505c49ec1a63816536934165224e8c 421 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 46 416 1.0E-100 T 21-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 VFU_RS01745 1f270f80f629b709f6cde340f1ee5a08 631 SUPERFAMILY SSF51905 6 66 9.06E-51 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS01745 1f270f80f629b709f6cde340f1ee5a08 631 SUPERFAMILY SSF51905 97 261 9.06E-51 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS01745 1f270f80f629b709f6cde340f1ee5a08 631 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 21-04-2016 IPR020595 MnmG-related, conserved site VFU_RS01745 1f270f80f629b709f6cde340f1ee5a08 631 Gene3D G3DSA:3.50.50.60 7 234 1.4E-54 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS01745 1f270f80f629b709f6cde340f1ee5a08 631 Pfam PF01134 Glucose inhibited division protein A 8 398 7.4E-171 T 21-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 VFU_RS01745 1f270f80f629b709f6cde340f1ee5a08 631 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.481 T 21-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 VFU_RS01745 1f270f80f629b709f6cde340f1ee5a08 631 SMART SM01228 546 617 9.8E-42 T 21-04-2016 VFU_RS01745 1f270f80f629b709f6cde340f1ee5a08 631 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 21-04-2016 IPR020595 MnmG-related, conserved site VFU_RS01745 1f270f80f629b709f6cde340f1ee5a08 631 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 3.4E-293 T 21-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 VFU_RS01745 1f270f80f629b709f6cde340f1ee5a08 631 PANTHER PTHR11806 1 627 0.0 T 21-04-2016 VFU_RS01745 1f270f80f629b709f6cde340f1ee5a08 631 PANTHER PTHR11806:SF0 1 627 0.0 T 21-04-2016 VFU_RS01745 1f270f80f629b709f6cde340f1ee5a08 631 Pfam PF13932 GidA associated domain 403 616 8.9E-71 T 21-04-2016 IPR026904 GidA associated domain 3 VFU_RS08940 ce92dfb8320ff0a9a0d14f51c9200b8d 378 Pfam PF04209 homogentisate 1,2-dioxygenase 85 377 1.6E-23 T 21-04-2016 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|UniPathway: UPA00139 VFU_RS08940 ce92dfb8320ff0a9a0d14f51c9200b8d 378 Gene3D G3DSA:2.60.120.10 216 352 1.8E-29 T 21-04-2016 IPR014710 RmlC-like jelly roll fold VFU_RS08940 ce92dfb8320ff0a9a0d14f51c9200b8d 378 Gene3D G3DSA:2.60.120.10 65 167 1.8E-22 T 21-04-2016 IPR014710 RmlC-like jelly roll fold VFU_RS08940 ce92dfb8320ff0a9a0d14f51c9200b8d 378 PANTHER PTHR11056 85 377 1.8E-72 T 21-04-2016 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|UniPathway: UPA00139 VFU_RS08940 ce92dfb8320ff0a9a0d14f51c9200b8d 378 SUPERFAMILY SSF51182 57 377 8.9E-90 T 21-04-2016 IPR011051 RmlC-like cupin domain VFU_RS08180 95e3e5484dbf8b8321a74cac4a5e22c9 1032 PANTHER PTHR32063:SF18 15 1032 0.0 T 21-04-2016 VFU_RS08180 95e3e5484dbf8b8321a74cac4a5e22c9 1032 SUPERFAMILY SSF82714 198 281 5.23E-11 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VFU_RS08180 95e3e5484dbf8b8321a74cac4a5e22c9 1032 Gene3D G3DSA:3.30.70.1430 572 617 3.3E-4 T 21-04-2016 VFU_RS08180 95e3e5484dbf8b8321a74cac4a5e22c9 1032 SUPERFAMILY SSF82693 150 196 1.52E-18 T 21-04-2016 VFU_RS08180 95e3e5484dbf8b8321a74cac4a5e22c9 1032 SUPERFAMILY SSF82693 284 337 1.52E-18 T 21-04-2016 VFU_RS08180 95e3e5484dbf8b8321a74cac4a5e22c9 1032 Gene3D G3DSA:3.30.70.1430 54 153 7.3E-27 T 21-04-2016 VFU_RS08180 95e3e5484dbf8b8321a74cac4a5e22c9 1032 Pfam PF00873 AcrB/AcrD/AcrF family 18 1026 1.9E-166 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS08180 95e3e5484dbf8b8321a74cac4a5e22c9 1032 Gene3D G3DSA:1.10.3850.10 816 1026 1.5E-56 T 21-04-2016 VFU_RS08180 95e3e5484dbf8b8321a74cac4a5e22c9 1032 PRINTS PR00702 Acriflavin resistance protein family signature 400 424 4.1E-26 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS08180 95e3e5484dbf8b8321a74cac4a5e22c9 1032 PRINTS PR00702 Acriflavin resistance protein family signature 24 48 4.1E-26 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS08180 95e3e5484dbf8b8321a74cac4a5e22c9 1032 PRINTS PR00702 Acriflavin resistance protein family signature 346 369 4.1E-26 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS08180 95e3e5484dbf8b8321a74cac4a5e22c9 1032 PRINTS PR00702 Acriflavin resistance protein family signature 478 501 4.1E-26 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS08180 95e3e5484dbf8b8321a74cac4a5e22c9 1032 PRINTS PR00702 Acriflavin resistance protein family signature 453 476 4.1E-26 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS08180 95e3e5484dbf8b8321a74cac4a5e22c9 1032 PRINTS PR00702 Acriflavin resistance protein family signature 52 70 4.1E-26 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS08180 95e3e5484dbf8b8321a74cac4a5e22c9 1032 PANTHER PTHR32063 15 1032 0.0 T 21-04-2016 VFU_RS08180 95e3e5484dbf8b8321a74cac4a5e22c9 1032 SUPERFAMILY SSF82866 807 1029 2.35E-46 T 21-04-2016 VFU_RS08180 95e3e5484dbf8b8321a74cac4a5e22c9 1032 SUPERFAMILY SSF82693 54 149 8.72E-22 T 21-04-2016 VFU_RS08180 95e3e5484dbf8b8321a74cac4a5e22c9 1032 SUPERFAMILY SSF82866 306 505 5.1E-34 T 21-04-2016 VFU_RS08180 95e3e5484dbf8b8321a74cac4a5e22c9 1032 SUPERFAMILY SSF82714 726 801 7.32E-8 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VFU_RS08180 95e3e5484dbf8b8321a74cac4a5e22c9 1032 Gene3D G3DSA:1.20.1640.10 304 516 1.1E-41 T 21-04-2016 VFU_RS08180 95e3e5484dbf8b8321a74cac4a5e22c9 1032 Gene3D G3DSA:3.30.2090.10 197 281 1.2E-11 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VFU_RS08180 95e3e5484dbf8b8321a74cac4a5e22c9 1032 Gene3D G3DSA:3.30.2090.10 727 801 2.6E-5 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VFU_RS10410 b588879492b3da40d54d0414821a39cb 97 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 30.628 T 21-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 VFU_RS10410 b588879492b3da40d54d0414821a39cb 97 SMART SM00411 3 92 1.7E-39 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VFU_RS10410 b588879492b3da40d54d0414821a39cb 97 PANTHER PTHR33175 2 96 8.0E-53 T 21-04-2016 VFU_RS10410 b588879492b3da40d54d0414821a39cb 97 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 94 2.1E-50 T 21-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 VFU_RS10410 b588879492b3da40d54d0414821a39cb 97 PANTHER PTHR33175:SF2 2 96 8.0E-53 T 21-04-2016 VFU_RS10410 b588879492b3da40d54d0414821a39cb 97 Pfam PF00216 Bacterial DNA-binding protein 3 91 2.1E-31 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VFU_RS10410 b588879492b3da40d54d0414821a39cb 97 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 5.83E-17 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VFU_RS10410 b588879492b3da40d54d0414821a39cb 97 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 5.83E-17 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VFU_RS10410 b588879492b3da40d54d0414821a39cb 97 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 5.83E-17 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VFU_RS10410 b588879492b3da40d54d0414821a39cb 97 Gene3D G3DSA:4.10.520.10 2 93 2.1E-36 T 21-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 VFU_RS10410 b588879492b3da40d54d0414821a39cb 97 SUPERFAMILY SSF47729 3 95 4.56E-32 T 21-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 VFU_RS10410 b588879492b3da40d54d0414821a39cb 97 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 21-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VFU_RS19160 5219eaa4417f9a892ae4d89561e01017 244 Pfam PF04784 Protein of unknown function, DUF547 95 207 9.7E-27 T 21-04-2016 IPR006869 Domain of unknown function DUF547 VFU_RS19160 5219eaa4417f9a892ae4d89561e01017 244 PANTHER PTHR23054 51 244 2.0E-28 T 21-04-2016 VFU_RS19160 5219eaa4417f9a892ae4d89561e01017 244 PANTHER PTHR23054:SF21 51 244 2.0E-28 T 21-04-2016 VFU_RS02165 dc2dc4aff618b6c6df0a9f480e9b001d 224 Pfam PF01926 50S ribosome-binding GTPase 29 147 3.2E-19 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 VFU_RS02165 dc2dc4aff618b6c6df0a9f480e9b001d 224 SUPERFAMILY SSF52540 16 199 2.17E-33 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS02165 dc2dc4aff618b6c6df0a9f480e9b001d 224 Gene3D G3DSA:3.40.50.300 7 198 2.0E-40 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS02165 dc2dc4aff618b6c6df0a9f480e9b001d 224 PANTHER PTHR11649 11 218 2.5E-53 T 21-04-2016 VFU_RS02165 dc2dc4aff618b6c6df0a9f480e9b001d 224 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 15 198 26.806 T 21-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 VFU_RS02165 dc2dc4aff618b6c6df0a9f480e9b001d 224 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 11 194 2.3E-71 T 21-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 VFU_RS13330 060a445d740fec643ec5016fae20f5e0 337 SUPERFAMILY SSF103088 224 305 2.09E-14 T 21-04-2016 IPR006665 OmpA-like domain VFU_RS13330 060a445d740fec643ec5016fae20f5e0 337 SUPERFAMILY SSF56925 31 184 5.76E-8 T 21-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VFU_RS13330 060a445d740fec643ec5016fae20f5e0 337 Pfam PF00691 OmpA family 233 306 1.4E-13 T 21-04-2016 IPR006665 OmpA-like domain VFU_RS13330 060a445d740fec643ec5016fae20f5e0 337 Pfam PF01389 OmpA-like transmembrane domain 64 188 9.1E-5 T 21-04-2016 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 VFU_RS13330 060a445d740fec643ec5016fae20f5e0 337 Gene3D G3DSA:2.40.160.20 16 203 5.8E-10 T 21-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VFU_RS13330 060a445d740fec643ec5016fae20f5e0 337 Gene3D G3DSA:3.30.1330.60 232 328 2.3E-14 T 21-04-2016 IPR006665 OmpA-like domain VFU_RS06850 7a1348ebc541354a6181395757121165 254 Pfam PF09339 IclR helix-turn-helix domain 13 63 4.4E-10 T 21-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 VFU_RS06850 7a1348ebc541354a6181395757121165 254 Gene3D G3DSA:3.30.450.40 87 254 1.4E-26 T 21-04-2016 IPR029016 GAF domain-like VFU_RS06850 7a1348ebc541354a6181395757121165 254 SUPERFAMILY SSF55781 77 253 4.77E-25 T 21-04-2016 IPR029016 GAF domain-like VFU_RS06850 7a1348ebc541354a6181395757121165 254 PANTHER PTHR30136:SF13 1 220 1.2E-35 T 21-04-2016 VFU_RS06850 7a1348ebc541354a6181395757121165 254 Gene3D G3DSA:1.10.10.10 9 82 2.3E-18 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS06850 7a1348ebc541354a6181395757121165 254 SUPERFAMILY SSF46785 13 80 1.72E-13 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS06850 7a1348ebc541354a6181395757121165 254 Pfam PF01614 Bacterial transcriptional regulator 131 225 2.3E-9 T 21-04-2016 IPR014757 Transcription regulator IclR, C-terminal VFU_RS06850 7a1348ebc541354a6181395757121165 254 SMART SM00346 11 101 5.9E-10 T 21-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 VFU_RS06850 7a1348ebc541354a6181395757121165 254 PANTHER PTHR30136 1 220 1.2E-35 T 21-04-2016 VFU_RS11720 47885d0c92393a6fbe015af98e64cd00 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.8E-8 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS11720 47885d0c92393a6fbe015af98e64cd00 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.8E-8 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS11720 47885d0c92393a6fbe015af98e64cd00 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.8E-8 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS11720 47885d0c92393a6fbe015af98e64cd00 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 3.4E-16 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS11720 47885d0c92393a6fbe015af98e64cd00 324 SUPERFAMILY SSF53850 92 322 6.95E-39 T 21-04-2016 VFU_RS11720 47885d0c92393a6fbe015af98e64cd00 324 Gene3D G3DSA:3.40.190.10 92 183 6.6E-18 T 21-04-2016 VFU_RS11720 47885d0c92393a6fbe015af98e64cd00 324 Gene3D G3DSA:1.10.10.10 1 81 9.8E-21 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS11720 47885d0c92393a6fbe015af98e64cd00 324 PANTHER PTHR30126:SF6 1 309 3.5E-204 T 21-04-2016 VFU_RS11720 47885d0c92393a6fbe015af98e64cd00 324 Gene3D G3DSA:3.40.190.10 184 262 3.7E-29 T 21-04-2016 VFU_RS11720 47885d0c92393a6fbe015af98e64cd00 324 PANTHER PTHR30126 1 309 3.5E-204 T 21-04-2016 VFU_RS11720 47885d0c92393a6fbe015af98e64cd00 324 Pfam PF03466 LysR substrate binding domain 92 292 6.5E-38 T 21-04-2016 IPR005119 LysR, substrate-binding VFU_RS11720 47885d0c92393a6fbe015af98e64cd00 324 SUPERFAMILY SSF46785 1 87 2.33E-13 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS05910 600027358aa91ac7b35b8e156a973036 488 SUPERFAMILY SSF46689 349 392 4.26E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS05910 600027358aa91ac7b35b8e156a973036 488 SUPERFAMILY SSF46689 434 486 4.26E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS05910 600027358aa91ac7b35b8e156a973036 488 Pfam PF02954 Bacterial regulatory protein, Fis family 444 484 4.3E-14 T 21-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VFU_RS05910 600027358aa91ac7b35b8e156a973036 488 SUPERFAMILY SSF52540 137 378 2.23E-72 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS05910 600027358aa91ac7b35b8e156a973036 488 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 467 487 1.8E-10 T 21-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VFU_RS05910 600027358aa91ac7b35b8e156a973036 488 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 450 467 1.8E-10 T 21-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VFU_RS05910 600027358aa91ac7b35b8e156a973036 488 Pfam PF00158 Sigma-54 interaction domain 137 304 1.9E-73 T 21-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VFU_RS05910 600027358aa91ac7b35b8e156a973036 488 PANTHER PTHR32071:SF36 1 488 5.5E-248 T 21-04-2016 VFU_RS05910 600027358aa91ac7b35b8e156a973036 488 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 21-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VFU_RS05910 600027358aa91ac7b35b8e156a973036 488 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 21-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VFU_RS05910 600027358aa91ac7b35b8e156a973036 488 Gene3D G3DSA:1.10.8.60 310 384 3.3E-21 T 21-04-2016 VFU_RS05910 600027358aa91ac7b35b8e156a973036 488 Gene3D G3DSA:1.10.10.60 432 486 3.6E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS05910 600027358aa91ac7b35b8e156a973036 488 Pfam PF06490 Flagellar regulatory protein FleQ 6 115 1.1E-28 T 21-04-2016 IPR010518 Flagellar regulatory FleQ VFU_RS05910 600027358aa91ac7b35b8e156a973036 488 SMART SM00382 157 301 2.5E-10 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS05910 600027358aa91ac7b35b8e156a973036 488 Gene3D G3DSA:3.40.50.300 134 309 1.8E-61 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS05910 600027358aa91ac7b35b8e156a973036 488 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 349 358 - T 21-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VFU_RS05910 600027358aa91ac7b35b8e156a973036 488 PANTHER PTHR32071 1 488 5.5E-248 T 21-04-2016 VFU_RS10830 ca3d9705798c4c488ccec2762f78f17d 332 SUPERFAMILY SSF52418 70 330 1.07E-94 T 21-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 VFU_RS10830 ca3d9705798c4c488ccec2762f78f17d 332 Pfam PF00591 Glycosyl transferase family, a/b domain 72 321 1.2E-105 T 21-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 VFU_RS10830 ca3d9705798c4c488ccec2762f78f17d 332 SUPERFAMILY SSF47648 1 67 6.67E-17 T 21-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain VFU_RS10830 ca3d9705798c4c488ccec2762f78f17d 332 Pfam PF02885 Glycosyl transferase family, helical bundle domain 3 63 1.5E-13 T 21-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain VFU_RS10830 ca3d9705798c4c488ccec2762f78f17d 332 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 6 330 2.8E-128 T 21-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 VFU_RS10830 ca3d9705798c4c488ccec2762f78f17d 332 PANTHER PTHR11922:SF5 20 32 6.2E-105 T 21-04-2016 VFU_RS10830 ca3d9705798c4c488ccec2762f78f17d 332 PANTHER PTHR11922:SF5 67 330 6.2E-105 T 21-04-2016 VFU_RS10830 ca3d9705798c4c488ccec2762f78f17d 332 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 3 331 39.661 T 21-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 VFU_RS10830 ca3d9705798c4c488ccec2762f78f17d 332 Gene3D G3DSA:3.40.1030.10 71 330 2.7E-101 T 21-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 VFU_RS10830 ca3d9705798c4c488ccec2762f78f17d 332 PANTHER PTHR11922 20 32 6.2E-105 T 21-04-2016 VFU_RS10830 ca3d9705798c4c488ccec2762f78f17d 332 PANTHER PTHR11922 67 330 6.2E-105 T 21-04-2016 VFU_RS10830 ca3d9705798c4c488ccec2762f78f17d 332 Gene3D G3DSA:1.20.970.10 2 68 1.5E-23 T 21-04-2016 VFU_RS01955 5efc4ce165b54be292cb6b532391a930 305 Gene3D G3DSA:3.40.190.10 14 101 1.1E-47 T 21-04-2016 VFU_RS01955 5efc4ce165b54be292cb6b532391a930 305 Gene3D G3DSA:3.40.190.10 224 288 1.1E-47 T 21-04-2016 VFU_RS01955 5efc4ce165b54be292cb6b532391a930 305 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 20 273 1.0E-61 T 21-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 VFU_RS01955 5efc4ce165b54be292cb6b532391a930 305 SUPERFAMILY SSF53850 13 289 1.11E-88 T 21-04-2016 VFU_RS01955 5efc4ce165b54be292cb6b532391a930 305 TIGRFAM TIGR03414 ABC_choline_bnd: choline ABC transporter, periplasmic binding protein 14 300 1.7E-144 T 21-04-2016 IPR017783 ABC transporter, choline, substrate-binding protein GO:0015871|GO:0033265|GO:0042597 VFU_RS01955 5efc4ce165b54be292cb6b532391a930 305 PANTHER PTHR30177 5 277 1.7E-136 T 21-04-2016 VFU_RS01955 5efc4ce165b54be292cb6b532391a930 305 Gene3D G3DSA:3.40.190.100 106 223 2.3E-20 T 21-04-2016 VFU_RS01955 5efc4ce165b54be292cb6b532391a930 305 PANTHER PTHR30177:SF6 5 277 1.7E-136 T 21-04-2016 VFU_RS00850 93c256eebb4f9bfddd0f38d9da2bf864 196 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 196 40.808 T 21-04-2016 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 VFU_RS00850 93c256eebb4f9bfddd0f38d9da2bf864 196 SUPERFAMILY SSF46689 6 78 2.67E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS00850 93c256eebb4f9bfddd0f38d9da2bf864 196 SUPERFAMILY SSF48498 81 191 3.71E-10 T 21-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal VFU_RS00850 93c256eebb4f9bfddd0f38d9da2bf864 196 PANTHER PTHR30055 1 191 2.3E-113 T 21-04-2016 VFU_RS00850 93c256eebb4f9bfddd0f38d9da2bf864 196 Gene3D G3DSA:1.10.357.10 5 191 1.8E-40 T 21-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 VFU_RS00850 93c256eebb4f9bfddd0f38d9da2bf864 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 58 2.6E-10 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VFU_RS00850 93c256eebb4f9bfddd0f38d9da2bf864 196 PANTHER PTHR30055:SF58 1 191 2.3E-113 T 21-04-2016 VFU_RS02965 09eb5d1c46b9124915488e33fc471e74 205 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 46 1.7E-6 T 21-04-2016 VFU_RS02965 09eb5d1c46b9124915488e33fc471e74 205 PANTHER PTHR30363:SF9 1 205 1.2E-100 T 21-04-2016 VFU_RS02965 09eb5d1c46b9124915488e33fc471e74 205 PANTHER PTHR30363 1 205 1.2E-100 T 21-04-2016 VFU_RS02965 09eb5d1c46b9124915488e33fc471e74 205 SUPERFAMILY SSF46785 6 183 2.77E-37 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS02965 09eb5d1c46b9124915488e33fc471e74 205 Gene3D G3DSA:1.10.10.10 6 98 8.8E-12 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS09430 f598dfc2c1ad40dca1a0cb62784e5102 707 PIRSF PIRSF037618 1 707 3.0E-298 T 21-04-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VFU_RS09430 f598dfc2c1ad40dca1a0cb62784e5102 707 Pfam PF02926 THUMP domain 31 153 3.5E-12 T 21-04-2016 IPR004114 THUMP domain GO:0003723 VFU_RS09430 f598dfc2c1ad40dca1a0cb62784e5102 707 Gene3D G3DSA:3.40.50.150 436 706 2.8E-74 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS09430 f598dfc2c1ad40dca1a0cb62784e5102 707 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 305 311 - T 21-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VFU_RS09430 f598dfc2c1ad40dca1a0cb62784e5102 707 PANTHER PTHR18895 405 682 3.8E-122 T 21-04-2016 VFU_RS09430 f598dfc2c1ad40dca1a0cb62784e5102 707 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 443 668 2.4E-25 T 21-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 VFU_RS09430 f598dfc2c1ad40dca1a0cb62784e5102 707 PANTHER PTHR18895:SF62 405 682 3.8E-122 T 21-04-2016 VFU_RS09430 f598dfc2c1ad40dca1a0cb62784e5102 707 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 21-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VFU_RS09430 f598dfc2c1ad40dca1a0cb62784e5102 707 SMART SM00981 56 154 4.0E-19 T 21-04-2016 IPR004114 THUMP domain GO:0003723 VFU_RS09430 f598dfc2c1ad40dca1a0cb62784e5102 707 SUPERFAMILY SSF53335 258 371 2.27E-41 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS09430 f598dfc2c1ad40dca1a0cb62784e5102 707 SUPERFAMILY SSF53335 139 217 2.27E-41 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS09430 f598dfc2c1ad40dca1a0cb62784e5102 707 Pfam PF01170 Putative RNA methylase family UPF0020 162 374 3.4E-64 T 21-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VFU_RS09430 f598dfc2c1ad40dca1a0cb62784e5102 707 Gene3D G3DSA:3.40.50.150 149 214 3.3E-27 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS09430 f598dfc2c1ad40dca1a0cb62784e5102 707 Gene3D G3DSA:3.40.50.150 255 335 3.3E-27 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS09430 f598dfc2c1ad40dca1a0cb62784e5102 707 SUPERFAMILY SSF53335 399 706 3.29E-68 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS09430 f598dfc2c1ad40dca1a0cb62784e5102 707 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 706 31.643 T 21-04-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VFU_RS05680 a9f7c8f93ef766a8e20da20652d639ae 313 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 21-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 VFU_RS05680 a9f7c8f93ef766a8e20da20652d639ae 313 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 305 1.5E-121 T 21-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 VFU_RS05680 a9f7c8f93ef766a8e20da20652d639ae 313 Gene3D G3DSA:3.40.50.2020 2 159 6.1E-74 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like VFU_RS05680 a9f7c8f93ef766a8e20da20652d639ae 313 PANTHER PTHR10210 2 305 3.4E-178 T 21-04-2016 VFU_RS05680 a9f7c8f93ef766a8e20da20652d639ae 313 SMART SM01400 4 121 7.5E-78 T 21-04-2016 VFU_RS05680 a9f7c8f93ef766a8e20da20652d639ae 313 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 4 313 47.037 T 21-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 VFU_RS05680 a9f7c8f93ef766a8e20da20652d639ae 313 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 1.0E-50 T 21-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 VFU_RS05680 a9f7c8f93ef766a8e20da20652d639ae 313 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 304 9.7E-25 T 21-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 VFU_RS05680 a9f7c8f93ef766a8e20da20652d639ae 313 Gene3D G3DSA:3.40.50.2020 160 286 4.4E-53 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like VFU_RS05680 a9f7c8f93ef766a8e20da20652d639ae 313 PANTHER PTHR10210:SF41 2 305 3.4E-178 T 21-04-2016 VFU_RS05680 a9f7c8f93ef766a8e20da20652d639ae 313 SUPERFAMILY SSF53271 69 299 5.46E-65 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like VFU_RS02395 ebf0680fcd8b68ffa57497232af36a04 284 Pfam PF01040 UbiA prenyltransferase family 24 266 6.8E-65 T 21-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 VFU_RS02395 ebf0680fcd8b68ffa57497232af36a04 284 PANTHER PTHR11048:SF7 1 284 1.3E-91 T 21-04-2016 VFU_RS02395 ebf0680fcd8b68ffa57497232af36a04 284 PANTHER PTHR11048 1 284 1.3E-91 T 21-04-2016 VFU_RS02395 ebf0680fcd8b68ffa57497232af36a04 284 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 1 284 29.817 T 21-04-2016 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 UniPathway: UPA00232 VFU_RS02395 ebf0680fcd8b68ffa57497232af36a04 284 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 8 283 1.2E-107 T 21-04-2016 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 UniPathway: UPA00232 VFU_RS09445 d024cf1895918505cb68e326f9924047 1613 PANTHER PTHR11606 49 150 0.0 T 21-04-2016 VFU_RS09445 d024cf1895918505cb68e326f9924047 1613 PANTHER PTHR11606 673 1097 0.0 T 21-04-2016 VFU_RS09445 d024cf1895918505cb68e326f9924047 1613 PANTHER PTHR11606 215 562 0.0 T 21-04-2016 VFU_RS09445 d024cf1895918505cb68e326f9924047 1613 PANTHER PTHR11606 1122 1367 0.0 T 21-04-2016 VFU_RS09445 d024cf1895918505cb68e326f9924047 1613 Gene3D G3DSA:3.40.50.720 1108 1204 6.8E-30 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS09445 d024cf1895918505cb68e326f9924047 1613 Gene3D G3DSA:3.40.50.720 942 1053 6.8E-30 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS09445 d024cf1895918505cb68e326f9924047 1613 SUPERFAMILY SSF51735 1083 1281 5.51E-30 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS09445 d024cf1895918505cb68e326f9924047 1613 SUPERFAMILY SSF51735 945 1047 5.51E-30 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS09445 d024cf1895918505cb68e326f9924047 1613 PANTHER PTHR11606:SF1 49 150 0.0 T 21-04-2016 VFU_RS09445 d024cf1895918505cb68e326f9924047 1613 PANTHER PTHR11606:SF1 673 1097 0.0 T 21-04-2016 VFU_RS09445 d024cf1895918505cb68e326f9924047 1613 PANTHER PTHR11606:SF1 215 562 0.0 T 21-04-2016 VFU_RS09445 d024cf1895918505cb68e326f9924047 1613 PANTHER PTHR11606:SF1 1122 1367 0.0 T 21-04-2016 VFU_RS09445 d024cf1895918505cb68e326f9924047 1613 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 76 1603 0.0 T 21-04-2016 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 VFU_RS09445 d024cf1895918505cb68e326f9924047 1613 Gene3D G3DSA:3.40.192.10 800 913 8.7E-4 T 21-04-2016 VFU_RS09445 d024cf1895918505cb68e326f9924047 1613 SUPERFAMILY SSF53223 754 940 2.78E-25 T 21-04-2016 VFU_RS09445 d024cf1895918505cb68e326f9924047 1613 PIRSF PIRSF036761 1 1610 0.0 T 21-04-2016 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 VFU_RS12345 d77650d274c75a957e53f2636deb559f 109 PIRSF PIRSF004555 3 109 4.0E-39 T 21-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family VFU_RS12345 d77650d274c75a957e53f2636deb559f 109 Gene3D G3DSA:3.30.1310.10 1 109 9.9E-51 T 21-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family VFU_RS12345 d77650d274c75a957e53f2636deb559f 109 SUPERFAMILY SSF82607 11 103 2.62E-36 T 21-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family VFU_RS12345 d77650d274c75a957e53f2636deb559f 109 PANTHER PTHR33449:SF1 1 109 2.4E-53 T 21-04-2016 VFU_RS12345 d77650d274c75a957e53f2636deb559f 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 23.43 T 21-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family VFU_RS12345 d77650d274c75a957e53f2636deb559f 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 100 5.4E-35 T 21-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family VFU_RS12345 d77650d274c75a957e53f2636deb559f 109 PANTHER PTHR33449 1 109 2.4E-53 T 21-04-2016 VFU_RS12345 d77650d274c75a957e53f2636deb559f 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 105 3.8E-39 T 21-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family VFU_RS06340 a4828d40ea19f040417f74b30c8c2ae5 194 PANTHER PTHR11404 1 194 1.2E-109 T 21-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VFU_RS06340 a4828d40ea19f040417f74b30c8c2ae5 194 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 82 3.6E-34 T 21-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VFU_RS06340 a4828d40ea19f040417f74b30c8c2ae5 194 Gene3D G3DSA:1.10.287.990 20 82 1.2E-23 T 21-04-2016 VFU_RS06340 a4828d40ea19f040417f74b30c8c2ae5 194 SUPERFAMILY SSF54719 84 193 4.32E-43 T 21-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VFU_RS06340 a4828d40ea19f040417f74b30c8c2ae5 194 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 190 4.3E-38 T 21-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VFU_RS06340 a4828d40ea19f040417f74b30c8c2ae5 194 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.5E-21 T 21-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VFU_RS06340 a4828d40ea19f040417f74b30c8c2ae5 194 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.5E-21 T 21-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VFU_RS06340 a4828d40ea19f040417f74b30c8c2ae5 194 PRINTS PR01703 Manganese superoxide dismutase signature 156 168 1.5E-21 T 21-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VFU_RS06340 a4828d40ea19f040417f74b30c8c2ae5 194 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 1.5E-21 T 21-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VFU_RS06340 a4828d40ea19f040417f74b30c8c2ae5 194 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 1.5E-21 T 21-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VFU_RS06340 a4828d40ea19f040417f74b30c8c2ae5 194 PIRSF PIRSF000349 1 194 1.5E-83 T 21-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VFU_RS06340 a4828d40ea19f040417f74b30c8c2ae5 194 PANTHER PTHR11404:SF8 1 194 1.2E-109 T 21-04-2016 VFU_RS06340 a4828d40ea19f040417f74b30c8c2ae5 194 SUPERFAMILY SSF46609 1 84 4.06E-35 T 21-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VFU_RS06340 a4828d40ea19f040417f74b30c8c2ae5 194 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 158 165 - T 21-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VFU_RS11475 1167be723843b505ce4f02a383adf030 691 PANTHER PTHR11472:SF32 1 688 1.8E-277 T 21-04-2016 VFU_RS11475 1167be723843b505ce4f02a383adf030 691 SUPERFAMILY SSF52540 195 268 1.88E-15 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS11475 1167be723843b505ce4f02a383adf030 691 SUPERFAMILY SSF52540 48 99 1.88E-15 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS11475 1167be723843b505ce4f02a383adf030 691 SUPERFAMILY SSF52540 493 665 1.88E-15 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS11475 1167be723843b505ce4f02a383adf030 691 SUPERFAMILY SSF52540 445 459 1.88E-15 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS11475 1167be723843b505ce4f02a383adf030 691 Pfam PF06733 DEAD_2 193 262 8.9E-7 T 21-04-2016 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 VFU_RS11475 1167be723843b505ce4f02a383adf030 691 SMART SM00491 535 671 1.3E-26 T 21-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VFU_RS11475 1167be723843b505ce4f02a383adf030 691 PANTHER PTHR11472 1 688 1.8E-277 T 21-04-2016 VFU_RS11475 1167be723843b505ce4f02a383adf030 691 Pfam PF13307 Helicase C-terminal domain 526 684 1.9E-35 T 21-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VFU_RS11475 1167be723843b505ce4f02a383adf030 691 Gene3D G3DSA:3.40.50.300 31 131 4.6E-14 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS11475 1167be723843b505ce4f02a383adf030 691 Gene3D G3DSA:3.40.50.300 212 254 4.6E-14 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS11475 1167be723843b505ce4f02a383adf030 691 Gene3D G3DSA:3.40.50.300 506 667 9.1E-9 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS02085 86c9fbb7c1f96f1ef977b9e3e7508ddb 500 Pfam PF02610 L-arabinose isomerase 5 358 3.0E-165 T 21-04-2016 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4|UniPathway: UPA00145 VFU_RS02085 86c9fbb7c1f96f1ef977b9e3e7508ddb 500 SUPERFAMILY SSF53743 1 325 6.54E-114 T 21-04-2016 IPR009015 L-fucose isomerase, N-terminal/central domain GO:0005737|GO:0005996|GO:0016861 VFU_RS02085 86c9fbb7c1f96f1ef977b9e3e7508ddb 500 Hamap MF_00519 L-arabinose isomerase [araA]. 1 475 60.721 T 21-04-2016 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4|UniPathway: UPA00145 VFU_RS02085 86c9fbb7c1f96f1ef977b9e3e7508ddb 500 Pfam PF11762 L-arabinose isomerase C-terminal domain 361 474 1.2E-43 T 21-04-2016 IPR024664 L-arabinose isomerase, C-terminal KEGG: 00040+5.3.1.4|UniPathway: UPA00145 VFU_RS02085 86c9fbb7c1f96f1ef977b9e3e7508ddb 500 SUPERFAMILY SSF50443 329 496 1.28E-63 T 21-04-2016 IPR004216 L-fucose/L-arabinose isomerase, C-terminal VFU_RS02085 86c9fbb7c1f96f1ef977b9e3e7508ddb 500 PANTHER PTHR38464:SF1 3 498 1.5E-182 T 21-04-2016 VFU_RS02085 86c9fbb7c1f96f1ef977b9e3e7508ddb 500 PANTHER PTHR38464 3 498 1.5E-182 T 21-04-2016 VFU_RS02085 86c9fbb7c1f96f1ef977b9e3e7508ddb 500 PIRSF PIRSF001478 1 498 1.9E-234 T 21-04-2016 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4|UniPathway: UPA00145 VFU_RS02085 86c9fbb7c1f96f1ef977b9e3e7508ddb 500 ProDom PD018364 ISOMERASE L-ARABINOSE ARABINOSE METABOLISM CARBOHYDRATE CATABOLISM ARAA 1 304 1.0E-144 T 21-04-2016 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4|UniPathway: UPA00145 VFU_RS22435 6a281a9c293c8a5998ac6633e3354a96 434 SUPERFAMILY SSF56935 2 425 2.75E-73 T 21-04-2016 VFU_RS22435 6a281a9c293c8a5998ac6633e3354a96 434 PANTHER PTHR32552:SF17 3 433 2.5E-72 T 21-04-2016 VFU_RS22435 6a281a9c293c8a5998ac6633e3354a96 434 Gene3D G3DSA:2.40.170.20 2 432 2.2E-114 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 VFU_RS22435 6a281a9c293c8a5998ac6633e3354a96 434 Pfam PF00593 TonB dependent receptor 298 426 1.9E-17 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 VFU_RS22435 6a281a9c293c8a5998ac6633e3354a96 434 PANTHER PTHR32552 3 433 2.5E-72 T 21-04-2016 VFU_RS01115 5c30be6ebef0c4d5b25b113d89978439 658 SUPERFAMILY SSF81345 352 650 9.15E-61 T 21-04-2016 IPR029022 ABC transporter, BtuC-like VFU_RS01115 5c30be6ebef0c4d5b25b113d89978439 658 PANTHER PTHR30472:SF16 242 657 1.1E-126 T 21-04-2016 VFU_RS01115 5c30be6ebef0c4d5b25b113d89978439 658 PANTHER PTHR30472 242 657 1.1E-126 T 21-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 VFU_RS01115 5c30be6ebef0c4d5b25b113d89978439 658 Gene3D G3DSA:1.10.3470.10 374 655 3.1E-70 T 21-04-2016 IPR029022 ABC transporter, BtuC-like VFU_RS01115 5c30be6ebef0c4d5b25b113d89978439 658 Gene3D G3DSA:1.10.3470.10 6 326 2.2E-61 T 21-04-2016 IPR029022 ABC transporter, BtuC-like VFU_RS01115 5c30be6ebef0c4d5b25b113d89978439 658 Pfam PF01032 FecCD transport family 11 323 3.0E-59 T 21-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 VFU_RS01115 5c30be6ebef0c4d5b25b113d89978439 658 Pfam PF01032 FecCD transport family 379 650 8.3E-66 T 21-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 VFU_RS01115 5c30be6ebef0c4d5b25b113d89978439 658 SUPERFAMILY SSF81345 9 323 3.14E-53 T 21-04-2016 IPR029022 ABC transporter, BtuC-like VFU_RS07555 f59f168ccde0c9f78a720d75940c4ff1 543 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 88 109 - T 21-04-2016 IPR023765 Solute-binding protein family 5, conserved site VFU_RS07555 f59f168ccde0c9f78a720d75940c4ff1 543 PIRSF PIRSF002741 1 543 2.3E-120 T 21-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VFU_RS07555 f59f168ccde0c9f78a720d75940c4ff1 543 SUPERFAMILY SSF53850 40 535 1.03E-149 T 21-04-2016 VFU_RS07555 f59f168ccde0c9f78a720d75940c4ff1 543 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 463 7.8E-97 T 21-04-2016 IPR000914 Solute-binding protein family 5 domain VFU_RS07555 f59f168ccde0c9f78a720d75940c4ff1 543 Gene3D G3DSA:3.10.105.10 311 511 1.9E-69 T 21-04-2016 VFU_RS07555 f59f168ccde0c9f78a720d75940c4ff1 543 PANTHER PTHR30290:SF23 27 540 1.0E-198 T 21-04-2016 VFU_RS07555 f59f168ccde0c9f78a720d75940c4ff1 543 Gene3D G3DSA:3.40.190.10 158 310 4.7E-54 T 21-04-2016 VFU_RS07555 f59f168ccde0c9f78a720d75940c4ff1 543 PANTHER PTHR30290 27 540 1.0E-198 T 21-04-2016 VFU_RS01020 d746df88ef166e788c0800990ec3f774 906 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 298 895 4.9E-185 T 21-04-2016 VFU_RS01020 d746df88ef166e788c0800990ec3f774 906 SUPERFAMILY SSF81665 485 580 1.57E-6 T 21-04-2016 VFU_RS01020 d746df88ef166e788c0800990ec3f774 906 SUPERFAMILY SSF81665 353 388 1.57E-6 T 21-04-2016 VFU_RS01020 d746df88ef166e788c0800990ec3f774 906 PANTHER PTHR24093:SF319 22 895 3.0E-287 T 21-04-2016 VFU_RS01020 d746df88ef166e788c0800990ec3f774 906 SUPERFAMILY SSF55008 72 133 1.96E-8 T 21-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VFU_RS01020 d746df88ef166e788c0800990ec3f774 906 SUPERFAMILY SSF81653 389 484 3.66E-28 T 21-04-2016 VFU_RS01020 d746df88ef166e788c0800990ec3f774 906 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 356 863 1.5E-90 T 21-04-2016 IPR001757 P-type ATPase GO:0016021 VFU_RS01020 d746df88ef166e788c0800990ec3f774 906 Gene3D G3DSA:2.70.150.10 330 485 3.2E-31 T 21-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 VFU_RS01020 d746df88ef166e788c0800990ec3f774 906 Gene3D G3DSA:3.30.70.100 6 66 3.2E-6 T 21-04-2016 VFU_RS01020 d746df88ef166e788c0800990ec3f774 906 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 588 594 - T 21-04-2016 IPR018303 P-type ATPase, phosphorylation site VFU_RS01020 d746df88ef166e788c0800990ec3f774 906 Gene3D G3DSA:3.30.70.100 162 226 1.8E-19 T 21-04-2016 VFU_RS01020 d746df88ef166e788c0800990ec3f774 906 Gene3D G3DSA:3.40.50.1000 557 599 3.5E-50 T 21-04-2016 IPR023214 HAD-like domain VFU_RS01020 d746df88ef166e788c0800990ec3f774 906 Gene3D G3DSA:3.40.50.1000 713 853 3.5E-50 T 21-04-2016 IPR023214 HAD-like domain VFU_RS01020 d746df88ef166e788c0800990ec3f774 906 PANTHER PTHR24093 22 895 3.0E-287 T 21-04-2016 VFU_RS01020 d746df88ef166e788c0800990ec3f774 906 Pfam PF00403 Heavy-metal-associated domain 79 132 2.0E-6 T 21-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VFU_RS01020 d746df88ef166e788c0800990ec3f774 906 Pfam PF00403 Heavy-metal-associated domain 169 224 2.8E-11 T 21-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VFU_RS01020 d746df88ef166e788c0800990ec3f774 906 SUPERFAMILY SSF55008 160 226 5.5E-17 T 21-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VFU_RS01020 d746df88ef166e788c0800990ec3f774 906 ProSitePatterns PS01047 Heavy-metal-associated domain. 169 198 - T 21-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 VFU_RS01020 d746df88ef166e788c0800990ec3f774 906 SUPERFAMILY SSF55008 4 67 1.44E-6 T 21-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VFU_RS01020 d746df88ef166e788c0800990ec3f774 906 SUPERFAMILY SSF56784 643 891 2.06E-56 T 21-04-2016 IPR023214 HAD-like domain VFU_RS01020 d746df88ef166e788c0800990ec3f774 906 SUPERFAMILY SSF56784 584 604 2.06E-56 T 21-04-2016 IPR023214 HAD-like domain VFU_RS01020 d746df88ef166e788c0800990ec3f774 906 Pfam PF00122 E1-E2 ATPase 355 577 6.9E-63 T 21-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 VFU_RS01020 d746df88ef166e788c0800990ec3f774 906 Gene3D G3DSA:3.40.1110.10 600 712 6.9E-14 T 21-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 VFU_RS01020 d746df88ef166e788c0800990ec3f774 906 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 586 600 3.6E-28 T 21-04-2016 VFU_RS01020 d746df88ef166e788c0800990ec3f774 906 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 785 804 3.6E-28 T 21-04-2016 VFU_RS01020 d746df88ef166e788c0800990ec3f774 906 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 732 742 3.6E-28 T 21-04-2016 VFU_RS01020 d746df88ef166e788c0800990ec3f774 906 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 434 448 3.6E-28 T 21-04-2016 VFU_RS01020 d746df88ef166e788c0800990ec3f774 906 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 808 820 3.6E-28 T 21-04-2016 VFU_RS01020 d746df88ef166e788c0800990ec3f774 906 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 710 721 3.6E-28 T 21-04-2016 VFU_RS01020 d746df88ef166e788c0800990ec3f774 906 Gene3D G3DSA:3.30.70.100 80 132 7.4E-8 T 21-04-2016 VFU_RS01020 d746df88ef166e788c0800990ec3f774 906 Pfam PF00702 haloacid dehalogenase-like hydrolase 583 799 1.2E-39 T 21-04-2016 VFU_RS01020 d746df88ef166e788c0800990ec3f774 906 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 317 894 7.1E-189 T 21-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 VFU_RS13125 ce9c01d8273d408693959c14480fd01e 151 PANTHER PTHR35146:SF1 1 151 6.3E-55 T 21-04-2016 VFU_RS13125 ce9c01d8273d408693959c14480fd01e 151 PANTHER PTHR35146 1 151 6.3E-55 T 21-04-2016 VFU_RS13125 ce9c01d8273d408693959c14480fd01e 151 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 19 146 4.3E-48 T 21-04-2016 IPR003791 Protein of unknown function UPF0178 VFU_RS13125 ce9c01d8273d408693959c14480fd01e 151 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 2 148 30.331 T 21-04-2016 IPR003791 Protein of unknown function UPF0178 VFU_RS09570 7a4985fd6ba0206a3e6ef811a636ec2b 688 SUPERFAMILY SSF69279 39 195 9.07E-49 T 21-04-2016 VFU_RS09570 7a4985fd6ba0206a3e6ef811a636ec2b 688 Gene3D G3DSA:2.40.50.230 380 461 6.7E-40 T 21-04-2016 IPR006531 Gp5 N-terminal VFU_RS09570 7a4985fd6ba0206a3e6ef811a636ec2b 688 PANTHER PTHR32305 4 679 3.8E-297 T 21-04-2016 VFU_RS09570 7a4985fd6ba0206a3e6ef811a636ec2b 688 SUPERFAMILY SSF69279 200 373 1.07E-43 T 21-04-2016 VFU_RS09570 7a4985fd6ba0206a3e6ef811a636ec2b 688 Gene3D G3DSA:3.55.50.10 109 200 2.2E-33 T 21-04-2016 VFU_RS09570 7a4985fd6ba0206a3e6ef811a636ec2b 688 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 39 531 6.3E-183 T 21-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset VFU_RS09570 7a4985fd6ba0206a3e6ef811a636ec2b 688 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 39 513 1.6E-131 T 21-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein VFU_RS09570 7a4985fd6ba0206a3e6ef811a636ec2b 688 SUPERFAMILY SSF69349 452 633 1.02E-45 T 21-04-2016 VFU_RS09570 7a4985fd6ba0206a3e6ef811a636ec2b 688 SUPERFAMILY SSF69255 376 461 5.49E-32 T 21-04-2016 VFU_RS09570 7a4985fd6ba0206a3e6ef811a636ec2b 688 Pfam PF05954 Phage late control gene D protein (GPD) 40 339 4.6E-78 T 21-04-2016 VFU_RS09570 7a4985fd6ba0206a3e6ef811a636ec2b 688 PANTHER PTHR32305:SF11 4 679 3.8E-297 T 21-04-2016 VFU_RS08555 e787b9eb01fc42e91d400b2fe3aee032 358 SUPERFAMILY SSF50969 56 180 2.16E-12 T 21-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like VFU_RS08555 e787b9eb01fc42e91d400b2fe3aee032 358 SUPERFAMILY SSF50969 242 351 2.16E-12 T 21-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like VFU_RS08555 e787b9eb01fc42e91d400b2fe3aee032 358 Gene3D G3DSA:2.130.10.10 281 307 1.8E-7 T 21-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 VFU_RS08555 e787b9eb01fc42e91d400b2fe3aee032 358 Gene3D G3DSA:2.130.10.10 55 180 1.8E-7 T 21-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 VFU_RS08555 e787b9eb01fc42e91d400b2fe3aee032 358 Gene3D G3DSA:2.130.10.10 215 228 1.8E-7 T 21-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 VFU_RS08555 e787b9eb01fc42e91d400b2fe3aee032 358 PIRSF PIRSF028101 1 358 5.5E-154 T 21-04-2016 IPR008311 Uncharacterised conserved protein UCP028101 VFU_RS08555 e787b9eb01fc42e91d400b2fe3aee032 358 Pfam PF07433 Protein of unknown function (DUF1513) 64 356 7.7E-107 T 21-04-2016 IPR008311 Uncharacterised conserved protein UCP028101 VFU_RS08080 8e3608832a1c9b3aa98bc862b405db3e 58 Pfam PF06796 Periplasmic nitrate reductase protein NapE 8 55 1.7E-25 T 21-04-2016 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE VFU_RS08080 8e3608832a1c9b3aa98bc862b405db3e 58 TIGRFAM TIGR02972 TMAO_torE: trimethylamine N-oxide reductase system, TorE protein 10 57 3.3E-30 T 21-04-2016 IPR014316 Trimethylamine N-oxide reductase system, TorE VFU_RS04775 00c2f51c00d1f34cb2286d5fdabd7bc0 283 Hamap MF_00008 Thymidylate synthase [thyA]. 1 283 33.197 T 21-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VFU_RS04775 00c2f51c00d1f34cb2286d5fdabd7bc0 283 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 283 4.3E-42 T 21-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VFU_RS04775 00c2f51c00d1f34cb2286d5fdabd7bc0 283 Pfam PF00303 Thymidylate synthase 2 283 2.1E-74 T 21-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VFU_RS04775 00c2f51c00d1f34cb2286d5fdabd7bc0 283 PANTHER PTHR11548 2 283 2.1E-107 T 21-04-2016 VFU_RS04775 00c2f51c00d1f34cb2286d5fdabd7bc0 283 Gene3D G3DSA:3.30.572.10 2 283 3.1E-78 T 21-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VFU_RS04775 00c2f51c00d1f34cb2286d5fdabd7bc0 283 SUPERFAMILY SSF55831 2 283 1.83E-90 T 21-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VFU_RS04775 00c2f51c00d1f34cb2286d5fdabd7bc0 283 ProSitePatterns PS00091 Thymidylate synthase active site. 140 168 - T 21-04-2016 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VFU_RS04775 00c2f51c00d1f34cb2286d5fdabd7bc0 283 PRINTS PR00108 Thymidylate synthase family signature 44 65 9.7E-14 T 21-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VFU_RS04775 00c2f51c00d1f34cb2286d5fdabd7bc0 283 PRINTS PR00108 Thymidylate synthase family signature 173 199 9.7E-14 T 21-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VFU_RS04775 00c2f51c00d1f34cb2286d5fdabd7bc0 283 PRINTS PR00108 Thymidylate synthase family signature 211 228 9.7E-14 T 21-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VFU_RS04775 00c2f51c00d1f34cb2286d5fdabd7bc0 283 PRINTS PR00108 Thymidylate synthase family signature 129 148 9.7E-14 T 21-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VFU_RS00985 5e45edb82762909249b9d988973452cc 227 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 222 6.4E-98 T 21-04-2016 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 VFU_RS00985 5e45edb82762909249b9d988973452cc 227 Gene3D G3DSA:1.10.10.10 125 224 7.5E-30 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS00985 5e45edb82762909249b9d988973452cc 227 SUPERFAMILY SSF52172 1 180 1.51E-38 T 21-04-2016 IPR011006 CheY-like superfamily VFU_RS00985 5e45edb82762909249b9d988973452cc 227 Pfam PF00072 Response regulator receiver domain 4 112 3.2E-28 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS00985 5e45edb82762909249b9d988973452cc 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 222 2.1E-24 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VFU_RS00985 5e45edb82762909249b9d988973452cc 227 PANTHER PTHR26402 1 223 6.5E-102 T 21-04-2016 VFU_RS00985 5e45edb82762909249b9d988973452cc 227 SMART SM00448 1 112 5.9E-42 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS00985 5e45edb82762909249b9d988973452cc 227 SMART SM00862 147 222 1.2E-24 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VFU_RS00985 5e45edb82762909249b9d988973452cc 227 PANTHER PTHR26402:SF575 1 223 6.5E-102 T 21-04-2016 VFU_RS00985 5e45edb82762909249b9d988973452cc 227 Gene3D G3DSA:3.40.50.2300 1 121 1.3E-37 T 21-04-2016 VFU_RS04955 b4097137ccd520114f6eed34c50175ce 158 PANTHER PTHR11079 7 158 2.5E-33 T 21-04-2016 VFU_RS04955 b4097137ccd520114f6eed34c50175ce 158 SUPERFAMILY SSF53927 4 153 3.58E-35 T 21-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 VFU_RS04955 b4097137ccd520114f6eed34c50175ce 158 PANTHER PTHR11079:SF69 7 158 2.5E-33 T 21-04-2016 VFU_RS04955 b4097137ccd520114f6eed34c50175ce 158 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 8 105 1.0E-18 T 21-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 VFU_RS04955 b4097137ccd520114f6eed34c50175ce 158 Gene3D G3DSA:3.40.140.10 4 153 8.1E-36 T 21-04-2016 VFU_RS04955 b4097137ccd520114f6eed34c50175ce 158 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 57 94 - T 21-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VFU_RS13440 25e77b9a54ec23e05c1b7786ba1cbe21 517 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 517 56.425 T 21-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 VFU_RS13440 25e77b9a54ec23e05c1b7786ba1cbe21 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 2.8E-7 T 21-04-2016 VFU_RS13440 25e77b9a54ec23e05c1b7786ba1cbe21 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 2.8E-7 T 21-04-2016 VFU_RS13440 25e77b9a54ec23e05c1b7786ba1cbe21 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 2.8E-7 T 21-04-2016 VFU_RS13440 25e77b9a54ec23e05c1b7786ba1cbe21 517 Pfam PF00958 GMP synthase C terminal domain 425 516 1.2E-43 T 21-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 VFU_RS13440 25e77b9a54ec23e05c1b7786ba1cbe21 517 SUPERFAMILY SSF54810 397 517 4.71E-51 T 21-04-2016 VFU_RS13440 25e77b9a54ec23e05c1b7786ba1cbe21 517 SUPERFAMILY SSF52402 189 412 8.16E-58 T 21-04-2016 VFU_RS13440 25e77b9a54ec23e05c1b7786ba1cbe21 517 Gene3D G3DSA:3.30.300.10 393 517 3.6E-53 T 21-04-2016 VFU_RS13440 25e77b9a54ec23e05c1b7786ba1cbe21 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 4.0E-6 T 21-04-2016 VFU_RS13440 25e77b9a54ec23e05c1b7786ba1cbe21 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 4.0E-6 T 21-04-2016 VFU_RS13440 25e77b9a54ec23e05c1b7786ba1cbe21 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 4.0E-6 T 21-04-2016 VFU_RS13440 25e77b9a54ec23e05c1b7786ba1cbe21 517 Pfam PF02540 NAD synthase 212 284 1.6E-7 T 21-04-2016 IPR022310 NAD/GMP synthase VFU_RS13440 25e77b9a54ec23e05c1b7786ba1cbe21 517 PRINTS PR00097 Anthranilate synthase component II signature 54 63 3.5E-6 T 21-04-2016 VFU_RS13440 25e77b9a54ec23e05c1b7786ba1cbe21 517 PRINTS PR00097 Anthranilate synthase component II signature 81 92 3.5E-6 T 21-04-2016 VFU_RS13440 25e77b9a54ec23e05c1b7786ba1cbe21 517 PRINTS PR00097 Anthranilate synthase component II signature 169 182 3.5E-6 T 21-04-2016 VFU_RS13440 25e77b9a54ec23e05c1b7786ba1cbe21 517 PANTHER PTHR11922 3 514 3.0E-298 T 21-04-2016 VFU_RS13440 25e77b9a54ec23e05c1b7786ba1cbe21 517 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 197 4.7E-84 T 21-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 VFU_RS13440 25e77b9a54ec23e05c1b7786ba1cbe21 517 Gene3D G3DSA:3.40.50.620 215 391 8.8E-57 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VFU_RS13440 25e77b9a54ec23e05c1b7786ba1cbe21 517 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 205 517 1.5E-155 T 21-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 VFU_RS13440 25e77b9a54ec23e05c1b7786ba1cbe21 517 Pfam PF00117 Glutamine amidotransferase class-I 12 191 1.5E-42 T 21-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 VFU_RS13440 25e77b9a54ec23e05c1b7786ba1cbe21 517 PANTHER PTHR11922:SF2 3 514 3.0E-298 T 21-04-2016 VFU_RS13440 25e77b9a54ec23e05c1b7786ba1cbe21 517 Gene3D G3DSA:3.40.50.880 4 214 3.9E-64 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like VFU_RS13440 25e77b9a54ec23e05c1b7786ba1cbe21 517 SUPERFAMILY SSF52317 9 200 1.21E-57 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like VFU_RS07745 d11ddf90838a39695d0bab0ce71b6f8e 248 Pfam PF00106 short chain dehydrogenase 4 182 3.3E-33 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS07745 d11ddf90838a39695d0bab0ce71b6f8e 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 2.1E-15 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS07745 d11ddf90838a39695d0bab0ce71b6f8e 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 179 2.1E-15 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS07745 d11ddf90838a39695d0bab0ce71b6f8e 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 160 2.1E-15 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS07745 d11ddf90838a39695d0bab0ce71b6f8e 248 Gene3D G3DSA:3.40.50.720 4 188 4.0E-43 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS07745 d11ddf90838a39695d0bab0ce71b6f8e 248 PANTHER PTHR24322:SF330 6 173 4.0E-34 T 21-04-2016 VFU_RS07745 d11ddf90838a39695d0bab0ce71b6f8e 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 128 156 - T 21-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VFU_RS07745 d11ddf90838a39695d0bab0ce71b6f8e 248 PANTHER PTHR24322 6 173 4.0E-34 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS07745 d11ddf90838a39695d0bab0ce71b6f8e 248 SUPERFAMILY SSF51735 4 240 7.09E-45 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS00855 18729b9051fc2060f0c4f2de479babb0 316 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 9 303 8.9E-70 T 21-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VFU_RS00855 18729b9051fc2060f0c4f2de479babb0 316 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 9 309 1.2E-125 T 21-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 VFU_RS00855 18729b9051fc2060f0c4f2de479babb0 316 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 8 313 44.127 T 21-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 VFU_RS00855 18729b9051fc2060f0c4f2de479babb0 316 PIRSF PIRSF026649 7 311 5.7E-77 T 21-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VFU_RS00855 18729b9051fc2060f0c4f2de479babb0 316 PANTHER PTHR30606:SF5 6 303 2.6E-138 T 21-04-2016 VFU_RS00855 18729b9051fc2060f0c4f2de479babb0 316 PANTHER PTHR30606 6 303 2.6E-138 T 21-04-2016 VFU_RS11330 7c4bd9a34bc2b7f725e8f58a39133790 435 PIRSF PIRSF009264 1 430 5.6E-198 T 21-04-2016 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 UniPathway: UPA00704 VFU_RS11330 7c4bd9a34bc2b7f725e8f58a39133790 435 PANTHER PTHR32502:SF12 227 420 7.6E-131 T 21-04-2016 VFU_RS11330 7c4bd9a34bc2b7f725e8f58a39133790 435 PANTHER PTHR32502:SF12 12 181 7.6E-131 T 21-04-2016 VFU_RS11330 7c4bd9a34bc2b7f725e8f58a39133790 435 PANTHER PTHR32502 227 420 7.6E-131 T 21-04-2016 VFU_RS11330 7c4bd9a34bc2b7f725e8f58a39133790 435 PANTHER PTHR32502 12 181 7.6E-131 T 21-04-2016 VFU_RS11330 7c4bd9a34bc2b7f725e8f58a39133790 435 TIGRFAM TIGR02810 agaZ_gatZ: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit 6 424 3.2E-206 T 21-04-2016 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 UniPathway: UPA00704 VFU_RS11330 7c4bd9a34bc2b7f725e8f58a39133790 435 Pfam PF08013 Tagatose 6 phosphate kinase 4 424 6.9E-193 T 21-04-2016 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 UniPathway: UPA00704 VFU_RS11330 7c4bd9a34bc2b7f725e8f58a39133790 435 SUPERFAMILY SSF51569 4 424 3.48E-162 T 21-04-2016 VFU_RS11330 7c4bd9a34bc2b7f725e8f58a39133790 435 Gene3D G3DSA:3.20.20.70 6 295 4.9E-138 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS11330 7c4bd9a34bc2b7f725e8f58a39133790 435 Gene3D G3DSA:1.10.400.20 296 411 2.8E-47 T 21-04-2016 VFU_RS04280 ad5c8d0382d5024fdd7f4b7eed37b6ad 149 SUPERFAMILY SSF54523 12 142 1.62E-18 T 21-04-2016 VFU_RS04280 ad5c8d0382d5024fdd7f4b7eed37b6ad 149 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 32 2.9E-10 T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site VFU_RS04280 ad5c8d0382d5024fdd7f4b7eed37b6ad 149 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site VFU_RS04280 ad5c8d0382d5024fdd7f4b7eed37b6ad 149 PANTHER PTHR30093 1 53 7.4E-16 T 21-04-2016 VFU_RS04280 ad5c8d0382d5024fdd7f4b7eed37b6ad 149 Pfam PF00114 Pilin (bacterial filament) 40 149 4.7E-8 T 21-04-2016 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 VFU_RS04280 ad5c8d0382d5024fdd7f4b7eed37b6ad 149 Pfam PF13633 Prokaryotic N-terminal methylation site 9 35 2.5E-12 T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site VFU_RS04280 ad5c8d0382d5024fdd7f4b7eed37b6ad 149 Gene3D G3DSA:3.30.700.10 12 148 7.6E-22 T 21-04-2016 VFU_RS03650 27ad52436bdaba0af5a6a5a1c00357f1 267 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS03650 27ad52436bdaba0af5a6a5a1c00357f1 267 PANTHER PTHR24220 8 263 1.1E-186 T 21-04-2016 VFU_RS03650 27ad52436bdaba0af5a6a5a1c00357f1 267 SMART SM00382 31 237 1.0E-11 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS03650 27ad52436bdaba0af5a6a5a1c00357f1 267 PANTHER PTHR24220:SF368 8 263 1.1E-186 T 21-04-2016 VFU_RS03650 27ad52436bdaba0af5a6a5a1c00357f1 267 SUPERFAMILY SSF52540 6 239 1.77E-65 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS03650 27ad52436bdaba0af5a6a5a1c00357f1 267 Pfam PF00005 ABC transporter 23 170 6.3E-29 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS03650 27ad52436bdaba0af5a6a5a1c00357f1 267 Gene3D G3DSA:3.40.50.300 3 237 8.1E-69 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS07700 7e77bde93b8ba6e38e9dfc0ec6ab5494 828 Gene3D G3DSA:3.50.50.60 104 306 4.6E-47 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS07700 7e77bde93b8ba6e38e9dfc0ec6ab5494 828 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 669 685 - T 21-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VFU_RS07700 7e77bde93b8ba6e38e9dfc0ec6ab5494 828 Gene3D G3DSA:3.50.50.60 2 103 1.8E-25 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS07700 7e77bde93b8ba6e38e9dfc0ec6ab5494 828 SUPERFAMILY SSF55124 492 631 2.45E-26 T 21-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VFU_RS07700 7e77bde93b8ba6e38e9dfc0ec6ab5494 828 SUPERFAMILY SSF51905 3 189 4.29E-42 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS07700 7e77bde93b8ba6e38e9dfc0ec6ab5494 828 SUPERFAMILY SSF51905 147 306 6.38E-25 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS07700 7e77bde93b8ba6e38e9dfc0ec6ab5494 828 PANTHER PTHR11493:SF52 409 824 4.6E-281 T 21-04-2016 VFU_RS07700 7e77bde93b8ba6e38e9dfc0ec6ab5494 828 PANTHER PTHR11493:SF52 1 253 4.6E-281 T 21-04-2016 VFU_RS07700 7e77bde93b8ba6e38e9dfc0ec6ab5494 828 PANTHER PTHR11493 409 824 4.6E-281 T 21-04-2016 VFU_RS07700 7e77bde93b8ba6e38e9dfc0ec6ab5494 828 PANTHER PTHR11493 1 253 4.6E-281 T 21-04-2016 VFU_RS07700 7e77bde93b8ba6e38e9dfc0ec6ab5494 828 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 1.2E-17 T 21-04-2016 VFU_RS07700 7e77bde93b8ba6e38e9dfc0ec6ab5494 828 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 231 247 1.2E-17 T 21-04-2016 VFU_RS07700 7e77bde93b8ba6e38e9dfc0ec6ab5494 828 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 280 1.2E-17 T 21-04-2016 VFU_RS07700 7e77bde93b8ba6e38e9dfc0ec6ab5494 828 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.2E-17 T 21-04-2016 VFU_RS07700 7e77bde93b8ba6e38e9dfc0ec6ab5494 828 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 163 1.2E-17 T 21-04-2016 VFU_RS07700 7e77bde93b8ba6e38e9dfc0ec6ab5494 828 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 4 790 0.0 T 21-04-2016 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 UniPathway: UPA00653 VFU_RS07700 7e77bde93b8ba6e38e9dfc0ec6ab5494 828 Pfam PF04324 BFD-like [2Fe-2S] binding domain 413 461 1.4E-14 T 21-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain VFU_RS07700 7e77bde93b8ba6e38e9dfc0ec6ab5494 828 Gene3D G3DSA:3.30.413.10 622 760 3.0E-35 T 21-04-2016 VFU_RS07700 7e77bde93b8ba6e38e9dfc0ec6ab5494 828 PRINTS PR00397 Sirohaem Fe-binding site signature 626 644 8.5E-7 T 21-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VFU_RS07700 7e77bde93b8ba6e38e9dfc0ec6ab5494 828 PRINTS PR00397 Sirohaem Fe-binding site signature 669 687 8.5E-7 T 21-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VFU_RS07700 7e77bde93b8ba6e38e9dfc0ec6ab5494 828 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 622 758 2.5E-19 T 21-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VFU_RS07700 7e77bde93b8ba6e38e9dfc0ec6ab5494 828 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 286 3.6E-51 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS07700 7e77bde93b8ba6e38e9dfc0ec6ab5494 828 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 550 611 5.2E-12 T 21-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VFU_RS07700 7e77bde93b8ba6e38e9dfc0ec6ab5494 828 PIRSF PIRSF037149 1 825 0.0 T 21-04-2016 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 VFU_RS07700 7e77bde93b8ba6e38e9dfc0ec6ab5494 828 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 145 170 5.1E-9 T 21-04-2016 VFU_RS07700 7e77bde93b8ba6e38e9dfc0ec6ab5494 828 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 232 246 5.1E-9 T 21-04-2016 VFU_RS07700 7e77bde93b8ba6e38e9dfc0ec6ab5494 828 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 273 280 5.1E-9 T 21-04-2016 VFU_RS07700 7e77bde93b8ba6e38e9dfc0ec6ab5494 828 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 5.1E-9 T 21-04-2016 VFU_RS07700 7e77bde93b8ba6e38e9dfc0ec6ab5494 828 SUPERFAMILY SSF56014 623 794 1.15E-50 T 21-04-2016 VFU_RS01655 03c334840fe4d316dd8bb53895227b57 453 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 218 238 7.4E-5 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 VFU_RS01655 03c334840fe4d316dd8bb53895227b57 453 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 282 7.4E-5 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 VFU_RS01655 03c334840fe4d316dd8bb53895227b57 453 Pfam PF12631 MnmE helical domain 122 450 2.5E-62 T 21-04-2016 IPR025867 MnmE, helical domain VFU_RS01655 03c334840fe4d316dd8bb53895227b57 453 Gene3D G3DSA:3.30.1360.120 2 120 1.0E-41 T 21-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 VFU_RS01655 03c334840fe4d316dd8bb53895227b57 453 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 10 453 2.4E-100 T 21-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 VFU_RS01655 03c334840fe4d316dd8bb53895227b57 453 PANTHER PTHR11649 7 453 3.7E-172 T 21-04-2016 VFU_RS01655 03c334840fe4d316dd8bb53895227b57 453 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 215 369 1.4E-22 T 21-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VFU_RS01655 03c334840fe4d316dd8bb53895227b57 453 Gene3D G3DSA:1.20.120.430 383 453 1.4E-60 T 21-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 VFU_RS01655 03c334840fe4d316dd8bb53895227b57 453 Gene3D G3DSA:1.20.120.430 121 181 1.4E-60 T 21-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 VFU_RS01655 03c334840fe4d316dd8bb53895227b57 453 Gene3D G3DSA:1.20.120.430 246 270 1.4E-60 T 21-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 VFU_RS01655 03c334840fe4d316dd8bb53895227b57 453 Pfam PF10396 GTP-binding protein TrmE N-terminus 5 119 7.5E-35 T 21-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal VFU_RS01655 03c334840fe4d316dd8bb53895227b57 453 SUPERFAMILY SSF116878 120 219 2.22E-53 T 21-04-2016 VFU_RS01655 03c334840fe4d316dd8bb53895227b57 453 SUPERFAMILY SSF116878 378 453 2.22E-53 T 21-04-2016 VFU_RS01655 03c334840fe4d316dd8bb53895227b57 453 Pfam PF01926 50S ribosome-binding GTPase 217 304 1.5E-23 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 VFU_RS01655 03c334840fe4d316dd8bb53895227b57 453 Gene3D G3DSA:3.40.50.300 285 374 2.3E-7 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS01655 03c334840fe4d316dd8bb53895227b57 453 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 4 453 33.028 T 21-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 VFU_RS01655 03c334840fe4d316dd8bb53895227b57 453 SUPERFAMILY SSF52540 70 151 8.76E-44 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS01655 03c334840fe4d316dd8bb53895227b57 453 SUPERFAMILY SSF52540 187 371 8.76E-44 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS01655 03c334840fe4d316dd8bb53895227b57 453 PANTHER PTHR11649:SF56 7 453 3.7E-172 T 21-04-2016 VFU_RS01655 03c334840fe4d316dd8bb53895227b57 453 Gene3D G3DSA:3.40.50.300 193 245 2.9E-8 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS04795 58e019b45ceb4f8312420a14b55f7b24 86 PANTHER PTHR33398 2 86 7.6E-39 T 21-04-2016 VFU_RS04795 58e019b45ceb4f8312420a14b55f7b24 86 SUPERFAMILY SSF46992 3 86 1.57E-32 T 21-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS04795 58e019b45ceb4f8312420a14b55f7b24 86 Gene3D G3DSA:1.20.58.110 3 86 2.2E-32 T 21-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS04795 58e019b45ceb4f8312420a14b55f7b24 86 Pfam PF01649 Ribosomal protein S20 2 84 1.4E-28 T 21-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS04795 58e019b45ceb4f8312420a14b55f7b24 86 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.439 T 21-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS04795 58e019b45ceb4f8312420a14b55f7b24 86 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 1.2E-31 T 21-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS04795 58e019b45ceb4f8312420a14b55f7b24 86 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 86 2.0E-28 T 21-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS03815 52ba51bf6391f8486972ad71dd1156cb 293 Pfam PF08220 DeoR-like helix-turn-helix domain 10 51 1.1E-4 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VFU_RS03815 52ba51bf6391f8486972ad71dd1156cb 293 Pfam PF13280 WYL domain 123 287 8.5E-17 T 21-04-2016 IPR026881 WYL domain VFU_RS03815 52ba51bf6391f8486972ad71dd1156cb 293 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 10 52 - T 21-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VFU_RS03815 52ba51bf6391f8486972ad71dd1156cb 293 Gene3D G3DSA:1.10.10.10 4 51 6.7E-5 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS09485 4635789134c2584e8bd4b968ccdaa997 418 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 7 404 1.0E-106 T 21-04-2016 IPR005219 Conserved hypothetical protein CHP00155 VFU_RS09485 4635789134c2584e8bd4b968ccdaa997 418 PANTHER PTHR30462:SF1 1 406 7.5E-187 T 21-04-2016 VFU_RS09485 4635789134c2584e8bd4b968ccdaa997 418 PANTHER PTHR30462 1 406 7.5E-187 T 21-04-2016 VFU_RS09485 4635789134c2584e8bd4b968ccdaa997 418 Gene3D G3DSA:3.90.10.10 213 246 1.7E-4 T 21-04-2016 VFU_RS09485 4635789134c2584e8bd4b968ccdaa997 418 Pfam PF04403 Paraquat-inducible protein A 251 406 4.7E-47 T 21-04-2016 IPR007498 Paraquat-inducible protein A VFU_RS09485 4635789134c2584e8bd4b968ccdaa997 418 Pfam PF04403 Paraquat-inducible protein A 56 207 1.7E-37 T 21-04-2016 IPR007498 Paraquat-inducible protein A VFU_RS04185 3b4160f5363a69ebbadd8b876a31a0b5 226 SUPERFAMILY SSF109755 30 213 1.31E-14 T 21-04-2016 VFU_RS04185 3b4160f5363a69ebbadd8b876a31a0b5 226 TIGRFAM TIGR00153 TIGR00153: TIGR00153 family protein 4 225 7.7E-69 T 21-04-2016 IPR002727 Protein of unknown function DUF47 VFU_RS04185 3b4160f5363a69ebbadd8b876a31a0b5 226 PANTHER PTHR36536:SF3 1 226 9.2E-139 T 21-04-2016 VFU_RS04185 3b4160f5363a69ebbadd8b876a31a0b5 226 Pfam PF01865 Protein of unknown function DUF47 7 223 3.0E-66 T 21-04-2016 IPR018445 Putative phosphate transport regulator VFU_RS04185 3b4160f5363a69ebbadd8b876a31a0b5 226 PANTHER PTHR36536 1 226 9.2E-139 T 21-04-2016 VFU_RS08290 25cf9f0c8affe690ee47d903aae9a7fb 70 SUPERFAMILY SSF50249 3 69 8.14E-26 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS08290 25cf9f0c8affe690ee47d903aae9a7fb 70 PANTHER PTHR11544 1 70 9.8E-41 T 21-04-2016 VFU_RS08290 25cf9f0c8affe690ee47d903aae9a7fb 70 PIRSF PIRSF002599 1 70 8.3E-26 T 21-04-2016 IPR012156 Cold shock, CspA GO:0003676 VFU_RS08290 25cf9f0c8affe690ee47d903aae9a7fb 70 Gene3D G3DSA:2.40.50.140 5 68 4.0E-31 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS08290 25cf9f0c8affe690ee47d903aae9a7fb 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 1.9E-30 T 21-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VFU_RS08290 25cf9f0c8affe690ee47d903aae9a7fb 70 SMART SM00357 6 70 8.0E-32 T 21-04-2016 IPR011129 Cold shock protein GO:0003676 VFU_RS08290 25cf9f0c8affe690ee47d903aae9a7fb 70 PRINTS PR00050 Cold shock protein signature 7 22 8.9E-18 T 21-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VFU_RS08290 25cf9f0c8affe690ee47d903aae9a7fb 70 PRINTS PR00050 Cold shock protein signature 28 37 8.9E-18 T 21-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VFU_RS08290 25cf9f0c8affe690ee47d903aae9a7fb 70 PRINTS PR00050 Cold shock protein signature 43 61 8.9E-18 T 21-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VFU_RS02645 bcbc3226b04770e0b32397392c80fa1a 233 Pfam PF00156 Phosphoribosyl transferase domain 190 230 5.7E-8 T 21-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 VFU_RS02645 bcbc3226b04770e0b32397392c80fa1a 233 PANTHER PTHR11907 14 233 3.4E-60 T 21-04-2016 VFU_RS02645 bcbc3226b04770e0b32397392c80fa1a 233 Gene3D G3DSA:3.40.50.2020 58 231 8.2E-26 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like VFU_RS02645 bcbc3226b04770e0b32397392c80fa1a 233 SUPERFAMILY SSF53271 54 230 4.54E-38 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like VFU_RS02645 bcbc3226b04770e0b32397392c80fa1a 233 PANTHER PTHR11907:SF9 14 233 3.4E-60 T 21-04-2016 VFU_RS21765 1499fdf76b9ea881d6c008444b0acc9e 78 PANTHER PTHR21666 2 75 1.9E-23 T 21-04-2016 VFU_RS21765 1499fdf76b9ea881d6c008444b0acc9e 78 Gene3D G3DSA:1.10.530.10 2 77 5.2E-24 T 21-04-2016 VFU_RS21765 1499fdf76b9ea881d6c008444b0acc9e 78 PANTHER PTHR21666:SF206 2 75 1.9E-23 T 21-04-2016 VFU_RS21765 1499fdf76b9ea881d6c008444b0acc9e 78 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 10 38 - T 21-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VFU_RS21765 1499fdf76b9ea881d6c008444b0acc9e 78 Pfam PF01464 Transglycosylase SLT domain 4 76 2.3E-18 T 21-04-2016 IPR008258 Transglycosylase SLT domain 1 VFU_RS21765 1499fdf76b9ea881d6c008444b0acc9e 78 SUPERFAMILY SSF53955 3 78 7.74E-23 T 21-04-2016 IPR023346 Lysozyme-like domain VFU_RS06520 976fceda9f9375f2fc043de27c47c358 414 SUPERFAMILY SSF53901 4 252 6.55E-80 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VFU_RS06520 976fceda9f9375f2fc043de27c47c358 414 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 9.9E-64 T 21-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal VFU_RS06520 976fceda9f9375f2fc043de27c47c358 414 Gene3D G3DSA:3.40.47.10 263 413 1.2E-57 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VFU_RS06520 976fceda9f9375f2fc043de27c47c358 414 Gene3D G3DSA:3.40.47.10 2 260 3.5E-79 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VFU_RS06520 976fceda9f9375f2fc043de27c47c358 414 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 412 1.4E-191 T 21-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 VFU_RS06520 976fceda9f9375f2fc043de27c47c358 414 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 21-04-2016 IPR018201 Beta-ketoacyl synthase, active site VFU_RS06520 976fceda9f9375f2fc043de27c47c358 414 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 370 3.9E-36 T 21-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal VFU_RS06520 976fceda9f9375f2fc043de27c47c358 414 PANTHER PTHR11712 3 413 1.8E-208 T 21-04-2016 VFU_RS06520 976fceda9f9375f2fc043de27c47c358 414 PIRSF PIRSF000447 1 414 3.7E-202 T 21-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 VFU_RS06520 976fceda9f9375f2fc043de27c47c358 414 SUPERFAMILY SSF53901 215 413 8.06E-67 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VFU_RS06520 976fceda9f9375f2fc043de27c47c358 414 SMART SM00825 Beta-ketoacyl synthase 6 414 2.3E-15 T 21-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VFU_RS04790 50eee9a80f375acda892ba844c3730dd 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 8.3E-16 T 21-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VFU_RS04790 50eee9a80f375acda892ba844c3730dd 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 47 8.3E-16 T 21-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VFU_RS04790 50eee9a80f375acda892ba844c3730dd 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 8.3E-16 T 21-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VFU_RS04790 50eee9a80f375acda892ba844c3730dd 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 8.3E-16 T 21-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VFU_RS04790 50eee9a80f375acda892ba844c3730dd 98 Pfam PF01022 Bacterial regulatory protein, arsR family 23 68 3.7E-17 T 21-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VFU_RS04790 50eee9a80f375acda892ba844c3730dd 98 Gene3D G3DSA:1.10.10.10 2 97 6.3E-38 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS04790 50eee9a80f375acda892ba844c3730dd 98 PANTHER PTHR33154:SF10 1 96 6.7E-28 T 21-04-2016 VFU_RS04790 50eee9a80f375acda892ba844c3730dd 98 PANTHER PTHR33154 1 96 6.7E-28 T 21-04-2016 VFU_RS04790 50eee9a80f375acda892ba844c3730dd 98 SMART SM00418 15 93 1.0E-29 T 21-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VFU_RS04790 50eee9a80f375acda892ba844c3730dd 98 SUPERFAMILY SSF46785 8 96 8.51E-27 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS13480 60f6320804bbc35299fbb7555845dd79 422 Pfam PF03129 Anticodon binding domain 339 419 8.0E-12 T 21-04-2016 IPR004154 Anticodon-binding VFU_RS13480 60f6320804bbc35299fbb7555845dd79 422 Gene3D G3DSA:3.30.930.10 221 320 2.1E-100 T 21-04-2016 VFU_RS13480 60f6320804bbc35299fbb7555845dd79 422 Gene3D G3DSA:3.30.930.10 4 185 2.1E-100 T 21-04-2016 VFU_RS13480 60f6320804bbc35299fbb7555845dd79 422 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 420 33.91 T 21-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 VFU_RS13480 60f6320804bbc35299fbb7555845dd79 422 PANTHER PTHR11476 2 422 3.6E-231 T 21-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 VFU_RS13480 60f6320804bbc35299fbb7555845dd79 422 PIRSF PIRSF001549 2 422 3.1E-125 T 21-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 VFU_RS13480 60f6320804bbc35299fbb7555845dd79 422 SUPERFAMILY SSF55681 5 321 1.1E-106 T 21-04-2016 VFU_RS13480 60f6320804bbc35299fbb7555845dd79 422 Pfam PF13393 Histidyl-tRNA synthetase 10 312 7.4E-44 T 21-04-2016 VFU_RS13480 60f6320804bbc35299fbb7555845dd79 422 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 410 7.9E-160 T 21-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 VFU_RS13480 60f6320804bbc35299fbb7555845dd79 422 PANTHER PTHR11476:SF9 2 422 3.6E-231 T 21-04-2016 VFU_RS13480 60f6320804bbc35299fbb7555845dd79 422 SUPERFAMILY SSF52954 327 420 3.76E-26 T 21-04-2016 IPR004154 Anticodon-binding VFU_RS13480 60f6320804bbc35299fbb7555845dd79 422 Gene3D G3DSA:3.40.50.800 327 420 5.5E-32 T 21-04-2016 IPR004154 Anticodon-binding VFU_RS15340 51b55ef4397c866be55d69863f0801de 139 SUPERFAMILY SSF111038 1 139 4.84E-50 T 21-04-2016 IPR001602 Uncharacterised protein family UPF0047 VFU_RS15340 51b55ef4397c866be55d69863f0801de 139 PIRSF PIRSF004681 1 139 1.5E-45 T 21-04-2016 IPR001602 Uncharacterised protein family UPF0047 VFU_RS15340 51b55ef4397c866be55d69863f0801de 139 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 100 118 - T 21-04-2016 IPR001602 Uncharacterised protein family UPF0047 VFU_RS15340 51b55ef4397c866be55d69863f0801de 139 PANTHER PTHR30615 1 139 1.0E-76 T 21-04-2016 VFU_RS15340 51b55ef4397c866be55d69863f0801de 139 Gene3D G3DSA:2.60.120.460 1 139 5.6E-59 T 21-04-2016 IPR001602 Uncharacterised protein family UPF0047 VFU_RS15340 51b55ef4397c866be55d69863f0801de 139 Pfam PF01894 Uncharacterised protein family UPF0047 19 135 2.0E-39 T 21-04-2016 IPR001602 Uncharacterised protein family UPF0047 VFU_RS15340 51b55ef4397c866be55d69863f0801de 139 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 14 139 2.2E-44 T 21-04-2016 IPR001602 Uncharacterised protein family UPF0047 VFU_RS15340 51b55ef4397c866be55d69863f0801de 139 PANTHER PTHR30615:SF5 1 139 1.0E-76 T 21-04-2016 VFU_RS04200 1b62d3f34442d32dea374dea88c7b86a 418 PANTHER PTHR32089:SF64 46 418 1.5E-126 T 21-04-2016 VFU_RS04200 1b62d3f34442d32dea374dea88c7b86a 418 SUPERFAMILY SSF58104 109 418 3.92E-75 T 21-04-2016 VFU_RS04200 1b62d3f34442d32dea374dea88c7b86a 418 PANTHER PTHR32089 46 418 1.5E-126 T 21-04-2016 VFU_RS04200 1b62d3f34442d32dea374dea88c7b86a 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 283 312 5.0E-22 T 21-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VFU_RS04200 1b62d3f34442d32dea374dea88c7b86a 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 68 88 5.0E-22 T 21-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VFU_RS04200 1b62d3f34442d32dea374dea88c7b86a 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 254 281 5.0E-22 T 21-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VFU_RS04200 1b62d3f34442d32dea374dea88c7b86a 418 Pfam PF00672 HAMP domain 70 137 1.2E-8 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS04200 1b62d3f34442d32dea374dea88c7b86a 418 SMART SM00283 156 417 2.4E-74 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VFU_RS04200 1b62d3f34442d32dea374dea88c7b86a 418 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 214 416 6.2E-48 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VFU_RS04200 1b62d3f34442d32dea374dea88c7b86a 418 SMART SM00304 89 141 0.0037 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS04200 1b62d3f34442d32dea374dea88c7b86a 418 Gene3D G3DSA:1.10.287.950 173 386 1.4E-59 T 21-04-2016 VFU_RS07875 c5d2f9533bd80f34b1f6a32542f59e71 648 Gene3D G3DSA:3.40.50.720 384 526 4.1E-39 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS07875 c5d2f9533bd80f34b1f6a32542f59e71 648 Gene3D G3DSA:3.20.20.70 2 377 3.4E-103 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS07875 c5d2f9533bd80f34b1f6a32542f59e71 648 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 565 581 1.141591E-11 T 21-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VFU_RS07875 c5d2f9533bd80f34b1f6a32542f59e71 648 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 390 412 1.141591E-11 T 21-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VFU_RS07875 c5d2f9533bd80f34b1f6a32542f59e71 648 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 508 532 1.141591E-11 T 21-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VFU_RS07875 c5d2f9533bd80f34b1f6a32542f59e71 648 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 391 410 3.63692E-16 T 21-04-2016 VFU_RS07875 c5d2f9533bd80f34b1f6a32542f59e71 648 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 512 530 3.63692E-16 T 21-04-2016 VFU_RS07875 c5d2f9533bd80f34b1f6a32542f59e71 648 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 473 491 3.63692E-16 T 21-04-2016 VFU_RS07875 c5d2f9533bd80f34b1f6a32542f59e71 648 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 389 610 8.7E-29 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS07875 c5d2f9533bd80f34b1f6a32542f59e71 648 SUPERFAMILY SSF51395 2 375 9.16E-91 T 21-04-2016 VFU_RS07875 c5d2f9533bd80f34b1f6a32542f59e71 648 PANTHER PTHR22893 4 431 1.5E-108 T 21-04-2016 VFU_RS07875 c5d2f9533bd80f34b1f6a32542f59e71 648 Gene3D G3DSA:3.50.50.60 527 647 2.3E-16 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS07875 c5d2f9533bd80f34b1f6a32542f59e71 648 PANTHER PTHR22893:SF7 4 431 1.5E-108 T 21-04-2016 VFU_RS07875 c5d2f9533bd80f34b1f6a32542f59e71 648 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 8 342 1.2E-62 T 21-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 VFU_RS07875 c5d2f9533bd80f34b1f6a32542f59e71 648 SUPERFAMILY SSF51905 371 648 6.15E-41 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS13495 bbd49b7d62fb8560580b76c1357dec5f 373 PANTHER PTHR30544 1 373 4.0E-197 T 21-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VFU_RS13495 bbd49b7d62fb8560580b76c1357dec5f 373 Pfam PF04055 Radical SAM superfamily 109 280 1.2E-13 T 21-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VFU_RS13495 bbd49b7d62fb8560580b76c1357dec5f 373 Gene3D G3DSA:3.20.20.70 106 326 1.7E-14 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS13495 bbd49b7d62fb8560580b76c1357dec5f 373 PIRSF PIRSF006004 3 367 6.5E-143 T 21-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VFU_RS13495 bbd49b7d62fb8560580b76c1357dec5f 373 PANTHER PTHR30544:SF5 1 373 4.0E-197 T 21-04-2016 VFU_RS13495 bbd49b7d62fb8560580b76c1357dec5f 373 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 5 353 71.859 T 21-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VFU_RS13495 bbd49b7d62fb8560580b76c1357dec5f 373 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 358 4.9E-160 T 21-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VFU_RS13495 bbd49b7d62fb8560580b76c1357dec5f 373 SUPERFAMILY SSF102114 105 327 3.14E-12 T 21-04-2016 VFU_RS08820 06b6300e3e262c1260d48900df704dfa 324 Gene3D G3DSA:3.40.50.2300 166 312 1.2E-40 T 21-04-2016 VFU_RS08820 06b6300e3e262c1260d48900df704dfa 324 Gene3D G3DSA:3.40.50.2300 24 165 1.8E-35 T 21-04-2016 VFU_RS08820 06b6300e3e262c1260d48900df704dfa 324 SUPERFAMILY SSF53822 23 323 2.9E-78 T 21-04-2016 IPR028082 Periplasmic binding protein-like I VFU_RS08820 06b6300e3e262c1260d48900df704dfa 324 Pfam PF13407 Periplasmic binding protein domain 26 297 1.2E-59 T 21-04-2016 IPR025997 Periplasmic binding protein VFU_RS08820 06b6300e3e262c1260d48900df704dfa 324 PANTHER PTHR30036 1 319 1.4E-137 T 21-04-2016 VFU_RS08820 06b6300e3e262c1260d48900df704dfa 324 PANTHER PTHR30036:SF2 1 319 1.4E-137 T 21-04-2016 VFU_RS10770 8d6ebfb36e66fa90e248a289e82af843 206 SUPERFAMILY SSF55821 1 203 5.8E-66 T 21-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain VFU_RS10770 8d6ebfb36e66fa90e248a289e82af843 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 1.7E-71 T 21-04-2016 IPR006070 YrdC-like domain GO:0003725 VFU_RS10770 8d6ebfb36e66fa90e248a289e82af843 206 Gene3D G3DSA:3.90.870.10 2 202 1.5E-65 T 21-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain VFU_RS10770 8d6ebfb36e66fa90e248a289e82af843 206 Pfam PF01300 Telomere recombination 23 198 4.8E-48 T 21-04-2016 IPR006070 YrdC-like domain GO:0003725 VFU_RS10770 8d6ebfb36e66fa90e248a289e82af843 206 PANTHER PTHR17490 1 205 1.1E-98 T 21-04-2016 VFU_RS10770 8d6ebfb36e66fa90e248a289e82af843 206 PANTHER PTHR17490:SF7 1 205 1.1E-98 T 21-04-2016 VFU_RS09275 af8e151e7dd8a8382697a8a909233be2 315 Gene3D G3DSA:3.40.50.620 4 141 7.0E-20 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VFU_RS09275 af8e151e7dd8a8382697a8a909233be2 315 Gene3D G3DSA:3.40.50.620 142 300 1.1E-23 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VFU_RS09275 af8e151e7dd8a8382697a8a909233be2 315 Pfam PF00582 Universal stress protein family 4 148 3.9E-13 T 21-04-2016 IPR006016 UspA GO:0006950 VFU_RS09275 af8e151e7dd8a8382697a8a909233be2 315 Pfam PF00582 Universal stress protein family 185 301 6.3E-14 T 21-04-2016 IPR006016 UspA GO:0006950 VFU_RS09275 af8e151e7dd8a8382697a8a909233be2 315 SUPERFAMILY SSF52402 168 308 3.52E-23 T 21-04-2016 VFU_RS09275 af8e151e7dd8a8382697a8a909233be2 315 PANTHER PTHR31964 245 313 2.0E-64 T 21-04-2016 VFU_RS09275 af8e151e7dd8a8382697a8a909233be2 315 PANTHER PTHR31964 1 90 2.0E-64 T 21-04-2016 VFU_RS09275 af8e151e7dd8a8382697a8a909233be2 315 PANTHER PTHR31964:SF41 245 313 2.0E-64 T 21-04-2016 VFU_RS09275 af8e151e7dd8a8382697a8a909233be2 315 PANTHER PTHR31964:SF41 1 90 2.0E-64 T 21-04-2016 VFU_RS09275 af8e151e7dd8a8382697a8a909233be2 315 SUPERFAMILY SSF52402 4 158 1.59E-24 T 21-04-2016 VFU_RS06135 dd8991ce68c8d4997da9b203ec8c5302 235 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 8 227 3.1E-85 T 21-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 VFU_RS06135 dd8991ce68c8d4997da9b203ec8c5302 235 SUPERFAMILY SSF54292 1 103 5.49E-29 T 21-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VFU_RS06135 dd8991ce68c8d4997da9b203ec8c5302 235 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 146 157 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VFU_RS06135 dd8991ce68c8d4997da9b203ec8c5302 235 Pfam PF13534 4Fe-4S dicluster domain 145 218 2.7E-10 T 21-04-2016 VFU_RS06135 dd8991ce68c8d4997da9b203ec8c5302 235 Gene3D G3DSA:3.10.20.30 1 103 2.1E-35 T 21-04-2016 IPR012675 Beta-grasp domain VFU_RS06135 dd8991ce68c8d4997da9b203ec8c5302 235 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 108 1.5E-29 T 21-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 VFU_RS06135 dd8991ce68c8d4997da9b203ec8c5302 235 PANTHER PTHR11921 4 233 3.4E-127 T 21-04-2016 VFU_RS06135 dd8991ce68c8d4997da9b203ec8c5302 235 PANTHER PTHR11921:SF29 4 233 3.4E-127 T 21-04-2016 VFU_RS06135 dd8991ce68c8d4997da9b203ec8c5302 235 SUPERFAMILY SSF46548 104 232 4.19E-40 T 21-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 VFU_RS06135 dd8991ce68c8d4997da9b203ec8c5302 235 Gene3D G3DSA:1.10.1060.10 104 233 2.3E-46 T 21-04-2016 VFU_RS02770 8efb8d51cf441c8ed28910eab226d03b 598 SUPERFAMILY SSF52833 477 595 7.68E-23 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS02770 8efb8d51cf441c8ed28910eab226d03b 598 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 201 404 5.4E-17 T 21-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 VFU_RS02770 8efb8d51cf441c8ed28910eab226d03b 598 Gene3D G3DSA:2.60.40.1250 32 146 8.5E-43 T 21-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain VFU_RS02770 8efb8d51cf441c8ed28910eab226d03b 598 Gene3D G3DSA:3.40.30.10 484 595 1.2E-37 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS02770 8efb8d51cf441c8ed28910eab226d03b 598 ProSitePatterns PS00194 Thioredoxin family active site. 505 523 - T 21-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 VFU_RS02770 8efb8d51cf441c8ed28910eab226d03b 598 Pfam PF11412 Disulphide bond corrector protein DsbC 35 145 1.3E-30 T 21-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain VFU_RS02770 8efb8d51cf441c8ed28910eab226d03b 598 Pfam PF13899 Thioredoxin-like 486 565 3.0E-16 T 21-04-2016 VFU_RS02770 8efb8d51cf441c8ed28910eab226d03b 598 PANTHER PTHR32234 191 595 1.9E-225 T 21-04-2016 VFU_RS02770 8efb8d51cf441c8ed28910eab226d03b 598 PANTHER PTHR32234 1 167 1.9E-225 T 21-04-2016 VFU_RS02770 8efb8d51cf441c8ed28910eab226d03b 598 PANTHER PTHR32234:SF0 191 595 1.9E-225 T 21-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 VFU_RS02770 8efb8d51cf441c8ed28910eab226d03b 598 PANTHER PTHR32234:SF0 1 167 1.9E-225 T 21-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 VFU_RS02770 8efb8d51cf441c8ed28910eab226d03b 598 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 597 39.082 T 21-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 VFU_RS02770 8efb8d51cf441c8ed28910eab226d03b 598 SUPERFAMILY SSF74863 34 146 5.36E-40 T 21-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain VFU_RS01545 151674f9323a1771641578a5483b9895 326 PANTHER PTHR11695:SF13 16 326 1.7E-160 T 21-04-2016 IPR014188 Acrylyl-CoA reductase AcuI VFU_RS01545 151674f9323a1771641578a5483b9895 326 PANTHER PTHR11695 16 326 1.7E-160 T 21-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 VFU_RS01545 151674f9323a1771641578a5483b9895 326 SUPERFAMILY SSF51735 117 291 3.34E-35 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS01545 151674f9323a1771641578a5483b9895 326 SUPERFAMILY SSF50129 2 145 3.62E-42 T 21-04-2016 IPR011032 GroES-like VFU_RS01545 151674f9323a1771641578a5483b9895 326 Gene3D G3DSA:3.90.180.10 16 139 4.3E-10 T 21-04-2016 IPR011032 GroES-like VFU_RS01545 151674f9323a1771641578a5483b9895 326 SMART SM00829 13 324 3.2E-4 T 21-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VFU_RS01545 151674f9323a1771641578a5483b9895 326 Pfam PF00107 Zinc-binding dehydrogenase 159 282 3.9E-11 T 21-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VFU_RS01545 151674f9323a1771641578a5483b9895 326 Gene3D G3DSA:3.40.50.720 140 292 1.2E-73 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS01545 151674f9323a1771641578a5483b9895 326 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 3 326 7.0E-137 T 21-04-2016 IPR014188 Acrylyl-CoA reductase AcuI VFU_RS09335 e371be1250b8000f400d524069df8711 579 SMART SM00448 457 569 5.3E-36 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS09335 e371be1250b8000f400d524069df8711 579 Pfam PF00072 Response regulator receiver domain 459 566 6.4E-29 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS09335 e371be1250b8000f400d524069df8711 579 SMART SM00387 320 431 4.9E-37 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS09335 e371be1250b8000f400d524069df8711 579 Gene3D G3DSA:3.30.565.10 259 434 1.3E-46 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS09335 e371be1250b8000f400d524069df8711 579 PANTHER PTHR24423 207 568 2.2E-139 T 21-04-2016 VFU_RS09335 e371be1250b8000f400d524069df8711 579 PANTHER PTHR24423 7 19 2.2E-139 T 21-04-2016 VFU_RS09335 e371be1250b8000f400d524069df8711 579 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 428 3.6E-20 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS09335 e371be1250b8000f400d524069df8711 579 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 409 3.6E-20 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS09335 e371be1250b8000f400d524069df8711 579 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 384 3.6E-20 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS09335 e371be1250b8000f400d524069df8711 579 PRINTS PR00344 Bacterial sensor protein C-terminal signature 356 370 3.6E-20 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS09335 e371be1250b8000f400d524069df8711 579 SUPERFAMILY SSF47384 194 274 1.12E-21 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS09335 e371be1250b8000f400d524069df8711 579 Gene3D G3DSA:3.40.50.2300 457 575 2.0E-41 T 21-04-2016 VFU_RS09335 e371be1250b8000f400d524069df8711 579 SUPERFAMILY SSF55874 262 431 3.8E-48 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS09335 e371be1250b8000f400d524069df8711 579 Gene3D G3DSA:1.10.287.130 203 258 1.1E-16 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS09335 e371be1250b8000f400d524069df8711 579 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 321 430 7.2E-28 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS09335 e371be1250b8000f400d524069df8711 579 Pfam PF00512 His Kinase A (phospho-acceptor) domain 209 273 1.2E-19 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS09335 e371be1250b8000f400d524069df8711 579 SMART SM00388 209 273 4.8E-22 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS09335 e371be1250b8000f400d524069df8711 579 SUPERFAMILY SSF52172 457 574 5.69E-37 T 21-04-2016 IPR011006 CheY-like superfamily VFU_RS09160 3ef137a649790aa98b7bd42cadb9117f 299 SUPERFAMILY SSF82689 204 292 9.94E-7 T 21-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 VFU_RS09160 3ef137a649790aa98b7bd42cadb9117f 299 PANTHER PTHR30566:SF11 52 292 4.2E-43 T 21-04-2016 VFU_RS09160 3ef137a649790aa98b7bd42cadb9117f 299 Gene3D G3DSA:2.30.30.60 147 192 1.9E-14 T 21-04-2016 VFU_RS09160 3ef137a649790aa98b7bd42cadb9117f 299 SUPERFAMILY SSF50182 132 193 3.92E-14 T 21-04-2016 IPR010920 LSM domain VFU_RS09160 3ef137a649790aa98b7bd42cadb9117f 299 Gene3D G3DSA:3.30.70.100 204 289 7.9E-5 T 21-04-2016 VFU_RS09160 3ef137a649790aa98b7bd42cadb9117f 299 PANTHER PTHR30566 52 292 4.2E-43 T 21-04-2016 VFU_RS09160 3ef137a649790aa98b7bd42cadb9117f 299 Pfam PF00924 Mechanosensitive ion channel 93 290 3.0E-35 T 21-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VFU_RS00785 20d0e7916203b47ff184728a9249ac6d 356 Gene3D G3DSA:3.40.50.2000 169 345 1.1E-43 T 21-04-2016 VFU_RS00785 20d0e7916203b47ff184728a9249ac6d 356 PANTHER PTHR30160 1 354 7.0E-145 T 21-04-2016 VFU_RS00785 20d0e7916203b47ff184728a9249ac6d 356 SUPERFAMILY SSF53756 9 345 5.18E-86 T 21-04-2016 VFU_RS00785 20d0e7916203b47ff184728a9249ac6d 356 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 75 301 1.3E-55 T 21-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 VFU_RS00785 20d0e7916203b47ff184728a9249ac6d 356 Gene3D G3DSA:3.40.50.2000 13 154 1.6E-25 T 21-04-2016 VFU_RS00785 20d0e7916203b47ff184728a9249ac6d 356 PANTHER PTHR30160:SF12 1 354 7.0E-145 T 21-04-2016 VFU_RS05415 7c3029020cc21b557786f2f3b36ef8b7 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 44.215 T 21-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 VFU_RS05415 7c3029020cc21b557786f2f3b36ef8b7 208 Gene3D G3DSA:3.40.50.2020 2 208 2.9E-74 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like VFU_RS05415 7c3029020cc21b557786f2f3b36ef8b7 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 2 208 1.0E-90 T 21-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 VFU_RS05415 7c3029020cc21b557786f2f3b36ef8b7 208 PANTHER PTHR10285 1 197 1.1E-100 T 21-04-2016 VFU_RS05415 7c3029020cc21b557786f2f3b36ef8b7 208 SUPERFAMILY SSF53271 3 206 5.24E-66 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like VFU_RS05415 7c3029020cc21b557786f2f3b36ef8b7 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 6.6E-64 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like VFU_RS08420 5ba4a6af59f33e1f1a62e0f5569072e8 383 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 8 373 7.0E-185 T 21-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VFU_RS08420 5ba4a6af59f33e1f1a62e0f5569072e8 383 PANTHER PTHR30341:SF0 1 379 1.6E-193 T 21-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VFU_RS08420 5ba4a6af59f33e1f1a62e0f5569072e8 383 Gene3D G3DSA:1.20.1530.10 4 379 1.1E-151 T 21-04-2016 IPR023171 Na/H antiporter domain VFU_RS08420 5ba4a6af59f33e1f1a62e0f5569072e8 383 PANTHER PTHR30341 1 379 1.6E-193 T 21-04-2016 VFU_RS08420 5ba4a6af59f33e1f1a62e0f5569072e8 383 Pfam PF06965 Na+/H+ antiporter 1 7 373 5.2E-145 T 21-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VFU_RS08420 5ba4a6af59f33e1f1a62e0f5569072e8 383 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 379 23.493 T 21-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VFU_RS02740 f589f4d7cc06fa4c2604ad28caf4a0c4 221 PANTHER PTHR34300:SF1 1 220 2.0E-130 T 21-04-2016 VFU_RS02740 f589f4d7cc06fa4c2604ad28caf4a0c4 221 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 14 204 6.5E-60 T 21-04-2016 IPR003744 Protein of unknown function DUF165 VFU_RS02740 f589f4d7cc06fa4c2604ad28caf4a0c4 221 Pfam PF02592 Putative vitamin uptake transporter 43 199 1.8E-37 T 21-04-2016 IPR003744 Protein of unknown function DUF165 VFU_RS02740 f589f4d7cc06fa4c2604ad28caf4a0c4 221 PANTHER PTHR34300 1 220 2.0E-130 T 21-04-2016 VFU_RS09245 d8ed63f6705d5ea20cde16cf8cd70f88 286 Gene3D G3DSA:1.10.3720.10 7 271 1.4E-48 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS09245 d8ed63f6705d5ea20cde16cf8cd70f88 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 283 2.0E-18 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS09245 d8ed63f6705d5ea20cde16cf8cd70f88 286 PANTHER PTHR30193 2 286 1.2E-127 T 21-04-2016 VFU_RS09245 d8ed63f6705d5ea20cde16cf8cd70f88 286 PANTHER PTHR30193:SF10 2 286 1.2E-127 T 21-04-2016 VFU_RS09245 d8ed63f6705d5ea20cde16cf8cd70f88 286 SUPERFAMILY SSF161098 10 275 6.41E-54 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS00200 35db7887da50755b3df6ec2f2ed06a1e 355 Gene3D G3DSA:3.20.20.210 2 353 1.1E-154 T 21-04-2016 VFU_RS00200 35db7887da50755b3df6ec2f2ed06a1e 355 SUPERFAMILY SSF51726 1 354 5.06E-121 T 21-04-2016 VFU_RS00200 35db7887da50755b3df6ec2f2ed06a1e 355 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 21-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VFU_RS00200 35db7887da50755b3df6ec2f2ed06a1e 355 PANTHER PTHR21091:SF2 1 351 4.7E-160 T 21-04-2016 VFU_RS00200 35db7887da50755b3df6ec2f2ed06a1e 355 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 348 1.6E-140 T 21-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VFU_RS00200 35db7887da50755b3df6ec2f2ed06a1e 355 PANTHER PTHR21091 1 351 4.7E-160 T 21-04-2016 VFU_RS00200 35db7887da50755b3df6ec2f2ed06a1e 355 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 350 50.328 T 21-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VFU_RS00200 35db7887da50755b3df6ec2f2ed06a1e 355 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 21-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VFU_RS00200 35db7887da50755b3df6ec2f2ed06a1e 355 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 348 2.7E-139 T 21-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VFU_RS09625 888cdefaf9829a2b4b9cad1d256493d5 399 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 298 4.7E-60 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS09625 888cdefaf9829a2b4b9cad1d256493d5 399 PANTHER PTHR22912:SF180 2 383 9.1E-108 T 21-04-2016 VFU_RS09625 888cdefaf9829a2b4b9cad1d256493d5 399 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 3.7E-27 T 21-04-2016 VFU_RS09625 888cdefaf9829a2b4b9cad1d256493d5 399 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 3.7E-27 T 21-04-2016 VFU_RS09625 888cdefaf9829a2b4b9cad1d256493d5 399 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 163 3.7E-27 T 21-04-2016 VFU_RS09625 888cdefaf9829a2b4b9cad1d256493d5 399 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 229 245 3.7E-27 T 21-04-2016 VFU_RS09625 888cdefaf9829a2b4b9cad1d256493d5 399 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 276 3.7E-27 T 21-04-2016 VFU_RS09625 888cdefaf9829a2b4b9cad1d256493d5 399 Gene3D G3DSA:3.50.50.60 108 307 1.6E-45 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS09625 888cdefaf9829a2b4b9cad1d256493d5 399 Gene3D G3DSA:3.50.50.60 1 107 8.0E-26 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS09625 888cdefaf9829a2b4b9cad1d256493d5 399 PANTHER PTHR22912 2 383 9.1E-108 T 21-04-2016 VFU_RS09625 888cdefaf9829a2b4b9cad1d256493d5 399 Gene3D G3DSA:3.30.390.30 317 399 8.3E-25 T 21-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VFU_RS09625 888cdefaf9829a2b4b9cad1d256493d5 399 Pfam PF14759 Reductase C-terminal 317 398 2.7E-22 T 21-04-2016 IPR028202 Reductase, C-terminal VFU_RS09625 888cdefaf9829a2b4b9cad1d256493d5 399 SUPERFAMILY SSF55424 309 398 9.61E-22 T 21-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 VFU_RS09625 888cdefaf9829a2b4b9cad1d256493d5 399 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 230 244 6.3E-18 T 21-04-2016 VFU_RS09625 888cdefaf9829a2b4b9cad1d256493d5 399 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 6.3E-18 T 21-04-2016 VFU_RS09625 888cdefaf9829a2b4b9cad1d256493d5 399 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 145 170 6.3E-18 T 21-04-2016 VFU_RS09625 888cdefaf9829a2b4b9cad1d256493d5 399 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 269 276 6.3E-18 T 21-04-2016 VFU_RS09625 888cdefaf9829a2b4b9cad1d256493d5 399 SUPERFAMILY SSF51905 2 307 4.48E-44 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS07815 90dce841a2c5d54d387bb0bc20439dc1 298 PANTHER PTHR21403:SF0 1 298 1.1E-120 T 21-04-2016 VFU_RS07815 90dce841a2c5d54d387bb0bc20439dc1 298 Gene3D G3DSA:3.40.190.10 2 138 4.1E-48 T 21-04-2016 VFU_RS07815 90dce841a2c5d54d387bb0bc20439dc1 298 Pfam PF01634 ATP phosphoribosyltransferase 53 218 2.8E-45 T 21-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 VFU_RS07815 90dce841a2c5d54d387bb0bc20439dc1 298 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 5 298 35.058 T 21-04-2016 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 VFU_RS07815 90dce841a2c5d54d387bb0bc20439dc1 298 SUPERFAMILY SSF53850 5 222 1.45E-65 T 21-04-2016 VFU_RS07815 90dce841a2c5d54d387bb0bc20439dc1 298 SUPERFAMILY SSF54913 225 297 1.45E-20 T 21-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta VFU_RS07815 90dce841a2c5d54d387bb0bc20439dc1 298 PANTHER PTHR21403 1 298 1.1E-120 T 21-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 VFU_RS07815 90dce841a2c5d54d387bb0bc20439dc1 298 Pfam PF08029 HisG, C-terminal domain 222 295 4.8E-24 T 21-04-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 VFU_RS07815 90dce841a2c5d54d387bb0bc20439dc1 298 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 205 297 1.1E-27 T 21-04-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 VFU_RS07815 90dce841a2c5d54d387bb0bc20439dc1 298 Gene3D G3DSA:3.30.70.120 225 298 5.4E-30 T 21-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VFU_RS07815 90dce841a2c5d54d387bb0bc20439dc1 298 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 155 176 - T 21-04-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 VFU_RS07815 90dce841a2c5d54d387bb0bc20439dc1 298 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 6 196 7.1E-55 T 21-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 VFU_RS13090 35618023bfaf816b77d68be852bddacc 621 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 620 45.917 T 21-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 VFU_RS13090 35618023bfaf816b77d68be852bddacc 621 Pfam PF02779 Transketolase, pyrimidine binding domain 318 479 1.6E-37 T 21-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain VFU_RS13090 35618023bfaf816b77d68be852bddacc 621 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 619 1.2E-300 T 21-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 VFU_RS13090 35618023bfaf816b77d68be852bddacc 621 PANTHER PTHR11624:SF20 24 218 0.0 T 21-04-2016 VFU_RS13090 35618023bfaf816b77d68be852bddacc 621 PANTHER PTHR11624:SF20 241 621 0.0 T 21-04-2016 VFU_RS13090 35618023bfaf816b77d68be852bddacc 621 SMART SM00861 319 483 1.4E-63 T 21-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain VFU_RS13090 35618023bfaf816b77d68be852bddacc 621 SUPERFAMILY SSF52518 8 199 1.53E-76 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold VFU_RS13090 35618023bfaf816b77d68be852bddacc 621 SUPERFAMILY SSF52518 243 381 1.53E-76 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold VFU_RS13090 35618023bfaf816b77d68be852bddacc 621 Gene3D G3DSA:3.40.50.970 26 201 1.7E-75 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold VFU_RS13090 35618023bfaf816b77d68be852bddacc 621 Gene3D G3DSA:3.40.50.970 242 334 1.7E-75 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold VFU_RS13090 35618023bfaf816b77d68be852bddacc 621 SUPERFAMILY SSF52922 492 619 2.09E-34 T 21-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 VFU_RS13090 35618023bfaf816b77d68be852bddacc 621 SUPERFAMILY SSF52518 317 504 2.27E-57 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold VFU_RS13090 35618023bfaf816b77d68be852bddacc 621 Gene3D G3DSA:3.40.50.920 496 619 1.2E-39 T 21-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 VFU_RS13090 35618023bfaf816b77d68be852bddacc 621 Gene3D G3DSA:3.40.50.970 335 495 1.0E-35 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold VFU_RS13090 35618023bfaf816b77d68be852bddacc 621 PANTHER PTHR11624 24 218 0.0 T 21-04-2016 IPR033247 Transketolase family VFU_RS13090 35618023bfaf816b77d68be852bddacc 621 PANTHER PTHR11624 241 621 0.0 T 21-04-2016 IPR033247 Transketolase family VFU_RS13090 35618023bfaf816b77d68be852bddacc 621 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 21-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 VFU_RS13090 35618023bfaf816b77d68be852bddacc 621 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 21-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 VFU_RS13090 35618023bfaf816b77d68be852bddacc 621 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 14 282 4.0E-119 T 21-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 VFU_RS13090 35618023bfaf816b77d68be852bddacc 621 Pfam PF02780 Transketolase, C-terminal domain 495 611 2.0E-27 T 21-04-2016 IPR033248 Transketolase, C-terminal domain VFU_RS03655 901db10550a89275f54493b3b93069c2 263 PANTHER PTHR30188:SF4 1 263 2.3E-124 T 21-04-2016 VFU_RS03655 901db10550a89275f54493b3b93069c2 263 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 10 261 6.0E-98 T 21-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria VFU_RS03655 901db10550a89275f54493b3b93069c2 263 PANTHER PTHR30188 1 263 2.3E-124 T 21-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 VFU_RS03655 901db10550a89275f54493b3b93069c2 263 Pfam PF02405 Permease MlaE 48 259 1.6E-74 T 21-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 VFU_RS09670 0ce6d5f3c11639bd6bc7bc7decf8502c 1307 SMART SM00490 313 413 8.1E-15 T 21-04-2016 IPR001650 Helicase, C-terminal VFU_RS09670 0ce6d5f3c11639bd6bc7bc7decf8502c 1307 Gene3D G3DSA:3.40.50.300 87 243 6.9E-48 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS09670 0ce6d5f3c11639bd6bc7bc7decf8502c 1307 PANTHER PTHR18934:SF109 38 711 0.0 T 21-04-2016 VFU_RS09670 0ce6d5f3c11639bd6bc7bc7decf8502c 1307 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 23 1305 0.0 T 21-04-2016 IPR010222 RNA helicase HrpA GO:0004004 VFU_RS09670 0ce6d5f3c11639bd6bc7bc7decf8502c 1307 Pfam PF00271 Helicase conserved C-terminal domain 299 412 2.1E-10 T 21-04-2016 IPR001650 Helicase, C-terminal VFU_RS09670 0ce6d5f3c11639bd6bc7bc7decf8502c 1307 Gene3D G3DSA:3.40.50.300 280 425 1.1E-11 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS09670 0ce6d5f3c11639bd6bc7bc7decf8502c 1307 PANTHER PTHR18934:SF109 748 876 0.0 T 21-04-2016 VFU_RS09670 0ce6d5f3c11639bd6bc7bc7decf8502c 1307 SMART SM00847 473 568 2.1E-37 T 21-04-2016 IPR007502 Helicase-associated domain GO:0004386 VFU_RS09670 0ce6d5f3c11639bd6bc7bc7decf8502c 1307 Pfam PF04408 Helicase associated domain (HA2) 475 567 3.2E-18 T 21-04-2016 IPR007502 Helicase-associated domain GO:0004386 VFU_RS09670 0ce6d5f3c11639bd6bc7bc7decf8502c 1307 Pfam PF11898 Domain of unknown function (DUF3418) 721 1305 2.9E-233 T 21-04-2016 IPR024590 RNA helicase HrpA, C-terminal VFU_RS09670 0ce6d5f3c11639bd6bc7bc7decf8502c 1307 PANTHER PTHR18934 38 711 0.0 T 21-04-2016 VFU_RS09670 0ce6d5f3c11639bd6bc7bc7decf8502c 1307 PANTHER PTHR18934 748 876 0.0 T 21-04-2016 VFU_RS09670 0ce6d5f3c11639bd6bc7bc7decf8502c 1307 SMART SM00382 102 393 3.3E-6 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS09670 0ce6d5f3c11639bd6bc7bc7decf8502c 1307 SMART SM00487 82 269 1.8E-27 T 21-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VFU_RS09670 0ce6d5f3c11639bd6bc7bc7decf8502c 1307 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 604 707 1.5E-18 T 21-04-2016 IPR011709 Domain of unknown function DUF1605 VFU_RS09670 0ce6d5f3c11639bd6bc7bc7decf8502c 1307 SUPERFAMILY SSF52540 84 614 2.97E-112 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS09670 0ce6d5f3c11639bd6bc7bc7decf8502c 1307 Pfam PF00270 DEAD/DEAH box helicase 98 243 3.2E-7 T 21-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VFU_RS15300 96274856fe3c910e7df30db5a4f8fcb7 610 SUPERFAMILY SSF63380 239 456 5.22E-63 T 21-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 VFU_RS15300 96274856fe3c910e7df30db5a4f8fcb7 610 PIRSF PIRSF000207 7 610 7.0E-273 T 21-04-2016 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VFU_RS15300 96274856fe3c910e7df30db5a4f8fcb7 610 Gene3D G3DSA:3.40.50.80 466 609 9.5E-61 T 21-04-2016 VFU_RS15300 96274856fe3c910e7df30db5a4f8fcb7 610 SUPERFAMILY SSF52343 455 610 6.02E-53 T 21-04-2016 VFU_RS15300 96274856fe3c910e7df30db5a4f8fcb7 610 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 7 610 49.745 T 21-04-2016 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VFU_RS15300 96274856fe3c910e7df30db5a4f8fcb7 610 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 15 610 7.6E-259 T 21-04-2016 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VFU_RS15300 96274856fe3c910e7df30db5a4f8fcb7 610 PANTHER PTHR19384 74 610 1.6E-209 T 21-04-2016 VFU_RS15300 96274856fe3c910e7df30db5a4f8fcb7 610 PANTHER PTHR19384:SF76 74 610 1.6E-209 T 21-04-2016 VFU_RS15300 96274856fe3c910e7df30db5a4f8fcb7 610 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 536 552 1.9E-28 T 21-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VFU_RS15300 96274856fe3c910e7df30db5a4f8fcb7 610 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 559 567 1.9E-28 T 21-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VFU_RS15300 96274856fe3c910e7df30db5a4f8fcb7 610 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 281 291 1.9E-28 T 21-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VFU_RS15300 96274856fe3c910e7df30db5a4f8fcb7 610 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 467 486 1.9E-28 T 21-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VFU_RS15300 96274856fe3c910e7df30db5a4f8fcb7 610 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 492 501 1.9E-28 T 21-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VFU_RS15300 96274856fe3c910e7df30db5a4f8fcb7 610 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 505 516 1.9E-28 T 21-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VFU_RS15300 96274856fe3c910e7df30db5a4f8fcb7 610 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 397 404 1.9E-28 T 21-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VFU_RS15300 96274856fe3c910e7df30db5a4f8fcb7 610 Gene3D G3DSA:1.20.990.10 292 394 9.2E-35 T 21-04-2016 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 GO:0016491|GO:0055114 VFU_RS15300 96274856fe3c910e7df30db5a4f8fcb7 610 Pfam PF00175 Oxidoreductase NAD-binding domain 468 574 4.1E-20 T 21-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VFU_RS15300 96274856fe3c910e7df30db5a4f8fcb7 610 Pfam PF00667 FAD binding domain 243 435 1.3E-30 T 21-04-2016 IPR003097 FAD-binding, type 1 GO:0016491|GO:0055114 VFU_RS15300 96274856fe3c910e7df30db5a4f8fcb7 610 SUPERFAMILY SSF52218 74 219 1.82E-46 T 21-04-2016 IPR029039 Flavoprotein-like domain VFU_RS15300 96274856fe3c910e7df30db5a4f8fcb7 610 Gene3D G3DSA:2.40.30.10 395 465 1.0E-39 T 21-04-2016 VFU_RS15300 96274856fe3c910e7df30db5a4f8fcb7 610 Gene3D G3DSA:2.40.30.10 239 291 1.0E-39 T 21-04-2016 VFU_RS15300 96274856fe3c910e7df30db5a4f8fcb7 610 Gene3D G3DSA:3.40.50.360 68 220 1.8E-47 T 21-04-2016 IPR029039 Flavoprotein-like domain VFU_RS15300 96274856fe3c910e7df30db5a4f8fcb7 610 PRINTS PR00369 Flavodoxin signature 156 166 1.3E-12 T 21-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VFU_RS15300 96274856fe3c910e7df30db5a4f8fcb7 610 PRINTS PR00369 Flavodoxin signature 124 135 1.3E-12 T 21-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VFU_RS15300 96274856fe3c910e7df30db5a4f8fcb7 610 PRINTS PR00369 Flavodoxin signature 180 199 1.3E-12 T 21-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VFU_RS15300 96274856fe3c910e7df30db5a4f8fcb7 610 PRINTS PR00369 Flavodoxin signature 76 89 1.3E-12 T 21-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VFU_RS15300 96274856fe3c910e7df30db5a4f8fcb7 610 Pfam PF00258 Flavodoxin 77 200 1.1E-30 T 21-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VFU_RS08145 3b180e4bf107f5f292a3d9a9faf1b53b 540 SUPERFAMILY SSF53850 34 534 2.9E-124 T 21-04-2016 VFU_RS08145 3b180e4bf107f5f292a3d9a9faf1b53b 540 PIRSF PIRSF002741 1 540 4.5E-85 T 21-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VFU_RS08145 3b180e4bf107f5f292a3d9a9faf1b53b 540 PANTHER PTHR30290 1 540 6.9E-263 T 21-04-2016 VFU_RS08145 3b180e4bf107f5f292a3d9a9faf1b53b 540 PANTHER PTHR30290:SF28 1 540 6.9E-263 T 21-04-2016 VFU_RS08145 3b180e4bf107f5f292a3d9a9faf1b53b 540 Gene3D G3DSA:3.90.76.10 42 222 2.8E-40 T 21-04-2016 VFU_RS08145 3b180e4bf107f5f292a3d9a9faf1b53b 540 Gene3D G3DSA:3.10.105.10 293 508 1.2E-52 T 21-04-2016 VFU_RS08145 3b180e4bf107f5f292a3d9a9faf1b53b 540 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 456 1.5E-79 T 21-04-2016 IPR000914 Solute-binding protein family 5 domain VFU_RS04410 5aa4a3a60c8d25709b9348deff0d4829 865 SUPERFAMILY SSF52016 163 372 3.34E-72 T 21-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VFU_RS04410 5aa4a3a60c8d25709b9348deff0d4829 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 853 0.0 T 21-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 VFU_RS04410 5aa4a3a60c8d25709b9348deff0d4829 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 21-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS04410 5aa4a3a60c8d25709b9348deff0d4829 865 Gene3D G3DSA:3.40.1060.10 520 682 2.0E-84 T 21-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS04410 5aa4a3a60c8d25709b9348deff0d4829 865 Gene3D G3DSA:3.30.499.10 684 859 1.4E-53 T 21-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS04410 5aa4a3a60c8d25709b9348deff0d4829 865 PIRSF PIRSF036687 1 859 0.0 T 21-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 VFU_RS04410 5aa4a3a60c8d25709b9348deff0d4829 865 PANTHER PTHR11670 305 863 0.0 T 21-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS04410 5aa4a3a60c8d25709b9348deff0d4829 865 SUPERFAMILY SSF74778 2 160 1.57E-67 T 21-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 VFU_RS04410 5aa4a3a60c8d25709b9348deff0d4829 865 PANTHER PTHR11670:SF39 305 863 0.0 T 21-04-2016 VFU_RS04410 5aa4a3a60c8d25709b9348deff0d4829 865 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 21-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS04410 5aa4a3a60c8d25709b9348deff0d4829 865 Gene3D G3DSA:3.20.19.10 162 361 3.9E-95 T 21-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VFU_RS04410 5aa4a3a60c8d25709b9348deff0d4829 865 Gene3D G3DSA:3.30.499.10 402 519 1.1E-63 T 21-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS04410 5aa4a3a60c8d25709b9348deff0d4829 865 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 1.2E-42 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS04410 5aa4a3a60c8d25709b9348deff0d4829 865 SUPERFAMILY SSF53732 379 860 3.53E-148 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS04410 5aa4a3a60c8d25709b9348deff0d4829 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 3.2E-65 T 21-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 VFU_RS04410 5aa4a3a60c8d25709b9348deff0d4829 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 2.0E-97 T 21-04-2016 IPR015929 Aconitase B, N-terminal GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 VFU_RS05755 eb925d923e65c09bc2a0236361896546 116 PANTHER PTHR30041:SF4 1 116 4.3E-64 T 21-04-2016 VFU_RS05755 eb925d923e65c09bc2a0236361896546 116 SUPERFAMILY SSF52833 2 116 7.23E-35 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS05755 eb925d923e65c09bc2a0236361896546 116 Gene3D G3DSA:3.40.30.10 1 116 1.2E-49 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS05755 eb925d923e65c09bc2a0236361896546 116 Pfam PF03960 ArsC family 6 115 8.8E-21 T 21-04-2016 IPR006660 Arsenate reductase-like VFU_RS05755 eb925d923e65c09bc2a0236361896546 116 PANTHER PTHR30041 1 116 4.3E-64 T 21-04-2016 VFU_RS05755 eb925d923e65c09bc2a0236361896546 116 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 3 116 4.0E-48 T 21-04-2016 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 VFU_RS07260 29163534a6c42bee116f17460f59f928 394 SUPERFAMILY SSF56322 16 386 2.75E-85 T 21-04-2016 IPR005801 ADC synthase GO:0009058 VFU_RS07260 29163534a6c42bee116f17460f59f928 394 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 100 383 3.5E-81 T 21-04-2016 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 VFU_RS07260 29163534a6c42bee116f17460f59f928 394 Pfam PF00425 chorismate binding enzyme 122 376 3.4E-70 T 21-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal VFU_RS07260 29163534a6c42bee116f17460f59f928 394 PANTHER PTHR11236 85 387 3.1E-144 T 21-04-2016 VFU_RS07260 29163534a6c42bee116f17460f59f928 394 Gene3D G3DSA:3.60.120.10 97 386 1.8E-79 T 21-04-2016 IPR005801 ADC synthase GO:0009058 VFU_RS07260 29163534a6c42bee116f17460f59f928 394 PANTHER PTHR11236:SF21 85 387 3.1E-144 T 21-04-2016 VFU_RS06605 bc95e5f9619e6403391a27764e3c254a 1023 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 4 968 1.1E-163 T 21-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS06605 bc95e5f9619e6403391a27764e3c254a 1023 PANTHER PTHR32294:SF4 1 1010 0.0 T 21-04-2016 VFU_RS06605 bc95e5f9619e6403391a27764e3c254a 1023 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 3 1023 13.199 T 21-04-2016 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS06605 bc95e5f9619e6403391a27764e3c254a 1023 Pfam PF14579 Helix-hairpin-helix motif 768 854 4.0E-18 T 21-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS06605 bc95e5f9619e6403391a27764e3c254a 1023 SMART SM00481 4 73 3.2E-7 T 21-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 VFU_RS06605 bc95e5f9619e6403391a27764e3c254a 1023 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 270 694 1.6E-145 T 21-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS06605 bc95e5f9619e6403391a27764e3c254a 1023 Pfam PF01336 OB-fold nucleic acid binding domain 933 1000 3.6E-8 T 21-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VFU_RS06605 bc95e5f9619e6403391a27764e3c254a 1023 Pfam PF02811 PHP domain 8 99 1.5E-10 T 21-04-2016 IPR004013 PHP domain GO:0003824 VFU_RS06605 bc95e5f9619e6403391a27764e3c254a 1023 PANTHER PTHR32294 1 1010 0.0 T 21-04-2016 VFU_RS14785 bf177cf2a980e3efe559874b4c9a60b2 645 PANTHER PTHR32552:SF15 8 645 1.1E-157 T 21-04-2016 VFU_RS14785 bf177cf2a980e3efe559874b4c9a60b2 645 PANTHER PTHR32552 8 645 1.1E-157 T 21-04-2016 VFU_RS14785 bf177cf2a980e3efe559874b4c9a60b2 645 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 628 645 - T 21-04-2016 IPR010917 TonB-dependent receptor, conserved site VFU_RS14785 bf177cf2a980e3efe559874b4c9a60b2 645 Pfam PF00593 TonB dependent receptor 392 643 2.3E-36 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 VFU_RS14785 bf177cf2a980e3efe559874b4c9a60b2 645 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 156 2.1E-26 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 VFU_RS14785 bf177cf2a980e3efe559874b4c9a60b2 645 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 40 - T 21-04-2016 IPR010916 TonB box, conserved site VFU_RS14785 bf177cf2a980e3efe559874b4c9a60b2 645 Gene3D G3DSA:2.40.170.20 160 645 1.1E-97 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 VFU_RS14785 bf177cf2a980e3efe559874b4c9a60b2 645 Gene3D G3DSA:2.170.130.10 25 159 6.7E-38 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 VFU_RS14785 bf177cf2a980e3efe559874b4c9a60b2 645 SUPERFAMILY SSF56935 33 645 7.33E-119 T 21-04-2016 VFU_RS11785 5fec8d47bf3389a08b5e31c381779e33 426 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 319 397 6.7E-16 T 21-04-2016 IPR019489 Clp ATPase, C-terminal VFU_RS11785 5fec8d47bf3389a08b5e31c381779e33 426 Pfam PF06689 ClpX C4-type zinc finger 14 51 3.0E-21 T 21-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 VFU_RS11785 5fec8d47bf3389a08b5e31c381779e33 426 SUPERFAMILY SSF52540 63 404 3.13E-71 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS11785 5fec8d47bf3389a08b5e31c381779e33 426 Pfam PF07724 AAA domain (Cdc48 subfamily) 114 312 5.3E-49 T 21-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VFU_RS11785 5fec8d47bf3389a08b5e31c381779e33 426 Gene3D G3DSA:1.10.8.60 318 417 7.0E-38 T 21-04-2016 VFU_RS11785 5fec8d47bf3389a08b5e31c381779e33 426 SMART SM00382 113 266 1.8E-9 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS11785 5fec8d47bf3389a08b5e31c381779e33 426 SMART SM01086 319 414 6.2E-34 T 21-04-2016 IPR019489 Clp ATPase, C-terminal VFU_RS11785 5fec8d47bf3389a08b5e31c381779e33 426 Gene3D G3DSA:3.40.50.300 296 312 2.6E-51 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS11785 5fec8d47bf3389a08b5e31c381779e33 426 Gene3D G3DSA:3.40.50.300 67 255 2.6E-51 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS11785 5fec8d47bf3389a08b5e31c381779e33 426 PANTHER PTHR11262 12 423 2.9E-252 T 21-04-2016 VFU_RS11785 5fec8d47bf3389a08b5e31c381779e33 426 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 12 414 9.7E-210 T 21-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 VFU_RS11785 5fec8d47bf3389a08b5e31c381779e33 426 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 417 53.421 T 21-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 VFU_RS11785 5fec8d47bf3389a08b5e31c381779e33 426 SMART SM00994 13 52 1.0E-24 T 21-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 VFU_RS11785 5fec8d47bf3389a08b5e31c381779e33 426 SUPERFAMILY SSF57716 14 49 5.84E-12 T 21-04-2016 VFU_RS15075 9ed9e2d8400a4824cd38d9c0ddfda83d 268 PANTHER PTHR10066 142 246 4.3E-13 T 21-04-2016 VFU_RS15075 9ed9e2d8400a4824cd38d9c0ddfda83d 268 PANTHER PTHR10066 3 120 4.3E-13 T 21-04-2016 VFU_RS15075 9ed9e2d8400a4824cd38d9c0ddfda83d 268 SUPERFAMILY SSF49785 2 157 1.53E-20 T 21-04-2016 IPR008979 Galactose-binding domain-like VFU_RS15075 9ed9e2d8400a4824cd38d9c0ddfda83d 268 Gene3D G3DSA:2.60.120.260 56 124 1.2E-6 T 21-04-2016 IPR008979 Galactose-binding domain-like VFU_RS12905 2c64734fd803af884bdbcb01dc855348 416 Gene3D G3DSA:3.90.1150.10 285 415 1.1E-54 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VFU_RS12905 2c64734fd803af884bdbcb01dc855348 416 PANTHER PTHR11680 1 415 0.0 T 21-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 VFU_RS12905 2c64734fd803af884bdbcb01dc855348 416 PIRSF PIRSF000412 1 415 2.3E-169 T 21-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 VFU_RS12905 2c64734fd803af884bdbcb01dc855348 416 PANTHER PTHR11680:SF9 1 415 0.0 T 21-04-2016 VFU_RS12905 2c64734fd803af884bdbcb01dc855348 416 Gene3D G3DSA:3.40.640.10 37 284 8.5E-110 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VFU_RS12905 2c64734fd803af884bdbcb01dc855348 416 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 416 52.434 T 21-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 VFU_RS12905 2c64734fd803af884bdbcb01dc855348 416 SUPERFAMILY SSF53383 6 415 2.86E-184 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VFU_RS12905 2c64734fd803af884bdbcb01dc855348 416 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 21-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 VFU_RS12905 2c64734fd803af884bdbcb01dc855348 416 Pfam PF00464 Serine hydroxymethyltransferase 8 385 5.6E-184 T 21-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 VFU_RS01230 d700d03b0460479a63fc1a5bf016037b 383 PANTHER PTHR30158:SF3 9 379 3.2E-148 T 21-04-2016 VFU_RS01230 d700d03b0460479a63fc1a5bf016037b 383 Pfam PF00529 HlyD membrane-fusion protein of T1SS 257 359 5.4E-8 T 21-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 VFU_RS01230 d700d03b0460479a63fc1a5bf016037b 383 SUPERFAMILY SSF111369 56 297 2.62E-79 T 21-04-2016 VFU_RS01230 d700d03b0460479a63fc1a5bf016037b 383 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 374 4.5E-88 T 21-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 VFU_RS01230 d700d03b0460479a63fc1a5bf016037b 383 Gene3D G3DSA:2.40.50.100 176 211 3.0E-25 T 21-04-2016 VFU_RS01230 d700d03b0460479a63fc1a5bf016037b 383 Gene3D G3DSA:2.40.50.100 68 101 3.0E-25 T 21-04-2016 VFU_RS01230 d700d03b0460479a63fc1a5bf016037b 383 PANTHER PTHR30158 9 379 3.2E-148 T 21-04-2016 VFU_RS01230 d700d03b0460479a63fc1a5bf016037b 383 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 66 292 3.5E-15 T 21-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VFU_RS11175 37abdbc6778b296e141e460b9854fe97 364 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 8 363 1.3E-161 T 21-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 VFU_RS11175 37abdbc6778b296e141e460b9854fe97 364 PANTHER PTHR21152 1 362 2.4E-187 T 21-04-2016 VFU_RS11175 37abdbc6778b296e141e460b9854fe97 364 SUPERFAMILY SSF53383 7 360 1.52E-113 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VFU_RS11175 37abdbc6778b296e141e460b9854fe97 364 PANTHER PTHR21152:SF1 1 362 2.4E-187 T 21-04-2016 VFU_RS11175 37abdbc6778b296e141e460b9854fe97 364 PIRSF PIRSF000525 2 364 9.5E-154 T 21-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 VFU_RS11175 37abdbc6778b296e141e460b9854fe97 364 Gene3D G3DSA:3.40.640.10 21 261 1.7E-103 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VFU_RS11175 37abdbc6778b296e141e460b9854fe97 364 Pfam PF00266 Aminotransferase class-V 8 352 6.0E-62 T 21-04-2016 IPR000192 Aminotransferase class V domain VFU_RS11175 37abdbc6778b296e141e460b9854fe97 364 Gene3D G3DSA:3.90.1150.10 262 362 2.7E-43 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VFU_RS11175 37abdbc6778b296e141e460b9854fe97 364 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 6 363 51.876 T 21-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 VFU_RS05310 53a06e5c348cdea0648e78a90fe2e12a 262 SUPERFAMILY SSF51161 1 262 4.26E-75 T 21-04-2016 IPR011004 Trimeric LpxA-like VFU_RS05310 53a06e5c348cdea0648e78a90fe2e12a 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 2.4E-26 T 21-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 VFU_RS05310 53a06e5c348cdea0648e78a90fe2e12a 262 PANTHER PTHR23416 1 254 2.1E-114 T 21-04-2016 VFU_RS05310 53a06e5c348cdea0648e78a90fe2e12a 262 PANTHER PTHR23416:SF8 1 254 2.1E-114 T 21-04-2016 VFU_RS05310 53a06e5c348cdea0648e78a90fe2e12a 262 PIRSF PIRSF000456 4 262 2.3E-95 T 21-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 VFU_RS05310 53a06e5c348cdea0648e78a90fe2e12a 262 Gene3D G3DSA:2.160.10.10 96 208 3.3E-24 T 21-04-2016 VFU_RS05310 53a06e5c348cdea0648e78a90fe2e12a 262 Gene3D G3DSA:2.160.10.10 2 95 2.9E-21 T 21-04-2016 VFU_RS05310 53a06e5c348cdea0648e78a90fe2e12a 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 1.3E-93 T 21-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 VFU_RS05310 53a06e5c348cdea0648e78a90fe2e12a 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 41.892 T 21-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 VFU_RS05310 53a06e5c348cdea0648e78a90fe2e12a 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 2 33 3.4E-6 T 21-04-2016 IPR001451 Hexapeptide repeat VFU_RS05310 53a06e5c348cdea0648e78a90fe2e12a 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 6.4E-7 T 21-04-2016 IPR001451 Hexapeptide repeat VFU_RS05310 53a06e5c348cdea0648e78a90fe2e12a 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 35 69 2.1E-4 T 21-04-2016 IPR001451 Hexapeptide repeat VFU_RS05310 53a06e5c348cdea0648e78a90fe2e12a 262 Gene3D G3DSA:1.20.1180.10 209 262 3.7E-24 T 21-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 VFU_RS07790 2d891be09a2fecb574dd5885c09abe3f 372 Gene3D G3DSA:3.40.50.620 6 218 1.3E-97 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VFU_RS07790 2d891be09a2fecb574dd5885c09abe3f 372 Gene3D G3DSA:2.40.30.10 289 370 2.4E-33 T 21-04-2016 VFU_RS07790 2d891be09a2fecb574dd5885c09abe3f 372 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 11 367 1.3E-151 T 21-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 VFU_RS07790 2d891be09a2fecb574dd5885c09abe3f 372 Pfam PF03054 tRNA methyl transferase 11 367 1.4E-142 T 21-04-2016 VFU_RS07790 2d891be09a2fecb574dd5885c09abe3f 372 PANTHER PTHR11933:SF10 1 371 6.8E-219 T 21-04-2016 VFU_RS07790 2d891be09a2fecb574dd5885c09abe3f 372 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 11 368 39.88 T 21-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 VFU_RS07790 2d891be09a2fecb574dd5885c09abe3f 372 PANTHER PTHR11933 1 371 6.8E-219 T 21-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 VFU_RS07790 2d891be09a2fecb574dd5885c09abe3f 372 SUPERFAMILY SSF52402 9 251 4.41E-57 T 21-04-2016 VFU_RS07790 2d891be09a2fecb574dd5885c09abe3f 372 Gene3D G3DSA:2.30.30.280 220 287 7.0E-33 T 21-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 VFU_RS08860 4cb86e8ea9203d936ba3400a5801f49e 278 Gene3D G3DSA:1.10.10.60 174 229 9.8E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS08860 4cb86e8ea9203d936ba3400a5801f49e 278 SUPERFAMILY SSF51215 27 153 2.22E-15 T 21-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VFU_RS08860 4cb86e8ea9203d936ba3400a5801f49e 278 SMART SM00342 191 273 2.1E-27 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VFU_RS08860 4cb86e8ea9203d936ba3400a5801f49e 278 SUPERFAMILY SSF46689 228 274 5.38E-8 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS08860 4cb86e8ea9203d936ba3400a5801f49e 278 SUPERFAMILY SSF46689 175 225 1.3E-11 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS08860 4cb86e8ea9203d936ba3400a5801f49e 278 Pfam PF12833 Helix-turn-helix domain 197 273 5.6E-21 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VFU_RS08860 4cb86e8ea9203d936ba3400a5801f49e 278 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 228 269 - T 21-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VFU_RS08860 4cb86e8ea9203d936ba3400a5801f49e 278 Pfam PF02311 AraC-like ligand binding domain 25 150 2.6E-17 T 21-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VFU_RS08860 4cb86e8ea9203d936ba3400a5801f49e 278 PANTHER PTHR11019:SF75 16 273 2.3E-49 T 21-04-2016 VFU_RS08860 4cb86e8ea9203d936ba3400a5801f49e 278 Gene3D G3DSA:2.60.120.280 29 153 2.1E-10 T 21-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VFU_RS08860 4cb86e8ea9203d936ba3400a5801f49e 278 Gene3D G3DSA:1.10.10.60 230 273 8.5E-12 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS08860 4cb86e8ea9203d936ba3400a5801f49e 278 PANTHER PTHR11019 16 273 2.3E-49 T 21-04-2016 VFU_RS02855 8ad2ea16bfd2f49160019a0049fdca1e 302 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 287 2.9E-25 T 21-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain VFU_RS02855 8ad2ea16bfd2f49160019a0049fdca1e 302 Pfam PF01545 Cation efflux family 15 206 9.4E-45 T 21-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VFU_RS02855 8ad2ea16bfd2f49160019a0049fdca1e 302 SUPERFAMILY SSF161111 8 207 1.18E-51 T 21-04-2016 VFU_RS02855 8ad2ea16bfd2f49160019a0049fdca1e 302 Gene3D G3DSA:3.30.70.1350 207 288 1.5E-28 T 21-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain VFU_RS02855 8ad2ea16bfd2f49160019a0049fdca1e 302 PANTHER PTHR11562:SF55 1 297 5.1E-113 T 21-04-2016 VFU_RS02855 8ad2ea16bfd2f49160019a0049fdca1e 302 PANTHER PTHR11562 1 297 5.1E-113 T 21-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VFU_RS02855 8ad2ea16bfd2f49160019a0049fdca1e 302 SUPERFAMILY SSF160240 210 288 3.66E-23 T 21-04-2016 VFU_RS02855 8ad2ea16bfd2f49160019a0049fdca1e 302 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 12 287 2.1E-70 T 21-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VFU_RS02855 8ad2ea16bfd2f49160019a0049fdca1e 302 Gene3D G3DSA:1.20.1510.10 12 206 2.1E-44 T 21-04-2016 IPR027469 Cation efflux protein transmembrane domain VFU_RS03595 d0e2ae0eb2ec4cdf27cf455e6635e5b3 92 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 15 22 - T 21-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VFU_RS03595 d0e2ae0eb2ec4cdf27cf455e6635e5b3 92 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 4 85 5.0E-23 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like VFU_RS03595 d0e2ae0eb2ec4cdf27cf455e6635e5b3 92 PANTHER PTHR33705:SF2 1 92 1.7E-39 T 21-04-2016 VFU_RS03595 d0e2ae0eb2ec4cdf27cf455e6635e5b3 92 Gene3D G3DSA:3.30.1340.10 5 90 1.3E-27 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like VFU_RS03595 d0e2ae0eb2ec4cdf27cf455e6635e5b3 92 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 42 57 - T 21-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site VFU_RS03595 d0e2ae0eb2ec4cdf27cf455e6635e5b3 92 Pfam PF00381 PTS HPr component phosphorylation site 5 85 1.8E-23 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like VFU_RS03595 d0e2ae0eb2ec4cdf27cf455e6635e5b3 92 PRINTS PR00107 Phosphocarrier protein signature 56 73 2.8E-13 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like VFU_RS03595 d0e2ae0eb2ec4cdf27cf455e6635e5b3 92 PRINTS PR00107 Phosphocarrier protein signature 41 56 2.8E-13 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like VFU_RS03595 d0e2ae0eb2ec4cdf27cf455e6635e5b3 92 PRINTS PR00107 Phosphocarrier protein signature 15 31 2.8E-13 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like VFU_RS03595 d0e2ae0eb2ec4cdf27cf455e6635e5b3 92 SUPERFAMILY SSF55594 5 91 1.96E-24 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like VFU_RS03595 d0e2ae0eb2ec4cdf27cf455e6635e5b3 92 PANTHER PTHR33705 1 92 1.7E-39 T 21-04-2016 VFU_RS02975 fdd91ecafd8bbbdaadf77f6ec00b23a2 545 SUPERFAMILY SSF52029 185 376 1.17E-81 T 21-04-2016 IPR027409 GroEL-like apical domain VFU_RS02975 fdd91ecafd8bbbdaadf77f6ec00b23a2 545 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 1.0E-95 T 21-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 VFU_RS02975 fdd91ecafd8bbbdaadf77f6ec00b23a2 545 SUPERFAMILY SSF54849 137 203 1.6E-24 T 21-04-2016 VFU_RS02975 fdd91ecafd8bbbdaadf77f6ec00b23a2 545 SUPERFAMILY SSF48592 406 521 7.63E-77 T 21-04-2016 VFU_RS02975 fdd91ecafd8bbbdaadf77f6ec00b23a2 545 SUPERFAMILY SSF48592 7 134 7.63E-77 T 21-04-2016 VFU_RS02975 fdd91ecafd8bbbdaadf77f6ec00b23a2 545 Hamap MF_00600 60 kDa chaperonin [groL]. 2 544 41.499 T 21-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 VFU_RS02975 fdd91ecafd8bbbdaadf77f6ec00b23a2 545 Gene3D G3DSA:3.50.7.10 202 369 1.9E-92 T 21-04-2016 IPR027409 GroEL-like apical domain VFU_RS02975 fdd91ecafd8bbbdaadf77f6ec00b23a2 545 Gene3D G3DSA:1.10.560.10 370 518 1.8E-39 T 21-04-2016 IPR027413 GroEL-like equatorial domain VFU_RS02975 fdd91ecafd8bbbdaadf77f6ec00b23a2 545 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 21-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 VFU_RS02975 fdd91ecafd8bbbdaadf77f6ec00b23a2 545 PANTHER PTHR11353 2 545 6.4E-255 T 21-04-2016 VFU_RS02975 fdd91ecafd8bbbdaadf77f6ec00b23a2 545 Gene3D G3DSA:1.10.560.10 3 201 4.6E-49 T 21-04-2016 IPR027413 GroEL-like equatorial domain VFU_RS02975 fdd91ecafd8bbbdaadf77f6ec00b23a2 545 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 1.7E-252 T 21-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 VFU_RS02975 fdd91ecafd8bbbdaadf77f6ec00b23a2 545 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 21-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 VFU_RS02975 fdd91ecafd8bbbdaadf77f6ec00b23a2 545 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 21-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 VFU_RS02975 fdd91ecafd8bbbdaadf77f6ec00b23a2 545 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 21-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 VFU_RS02975 fdd91ecafd8bbbdaadf77f6ec00b23a2 545 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 21-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 VFU_RS02975 fdd91ecafd8bbbdaadf77f6ec00b23a2 545 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 21-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 VFU_RS11400 ac5fae5f1c524aac9b1f66edefdb2278 135 PANTHER PTHR31793 2 130 1.8E-51 T 21-04-2016 VFU_RS11400 ac5fae5f1c524aac9b1f66edefdb2278 135 SUPERFAMILY SSF54637 3 126 2.33E-40 T 21-04-2016 IPR029069 HotDog domain VFU_RS11400 ac5fae5f1c524aac9b1f66edefdb2278 135 PIRSF PIRSF003230 1 134 1.6E-47 T 21-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 VFU_RS11400 ac5fae5f1c524aac9b1f66edefdb2278 135 Gene3D G3DSA:3.10.129.10 2 126 4.5E-50 T 21-04-2016 IPR029069 HotDog domain VFU_RS11400 ac5fae5f1c524aac9b1f66edefdb2278 135 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 9 123 7.4E-37 T 21-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 VFU_RS11400 ac5fae5f1c524aac9b1f66edefdb2278 135 Pfam PF03061 Thioesterase superfamily 18 103 4.8E-18 T 21-04-2016 IPR006683 Thioesterase domain VFU_RS11400 ac5fae5f1c524aac9b1f66edefdb2278 135 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 4 127 1.3E-50 T 21-04-2016 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 KEGG: 00360+3.1.2.-|KEGG: 00362+3.1.2.-|KEGG: 00592+3.1.2.-|KEGG: 00903+3.1.2.- VFU_RS11400 ac5fae5f1c524aac9b1f66edefdb2278 135 PANTHER PTHR31793:SF9 2 130 1.8E-51 T 21-04-2016 VFU_RS14720 0278f1111f2824cad15a33c97aaceb62 610 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 610 40.52 T 21-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 VFU_RS14720 0278f1111f2824cad15a33c97aaceb62 610 Gene3D G3DSA:3.40.50.10490 446 610 1.8E-65 T 21-04-2016 VFU_RS14720 0278f1111f2824cad15a33c97aaceb62 610 Pfam PF13522 Glutamine amidotransferase domain 62 174 3.8E-22 T 21-04-2016 VFU_RS14720 0278f1111f2824cad15a33c97aaceb62 610 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 610 1.4E-260 T 21-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 VFU_RS14720 0278f1111f2824cad15a33c97aaceb62 610 PANTHER PTHR10937 1 610 0.0 T 21-04-2016 VFU_RS14720 0278f1111f2824cad15a33c97aaceb62 610 SUPERFAMILY SSF53697 245 610 1.76E-112 T 21-04-2016 VFU_RS14720 0278f1111f2824cad15a33c97aaceb62 610 Gene3D G3DSA:3.60.20.10 2 236 3.9E-78 T 21-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VFU_RS14720 0278f1111f2824cad15a33c97aaceb62 610 SUPERFAMILY SSF56235 2 234 1.89E-74 T 21-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VFU_RS14720 0278f1111f2824cad15a33c97aaceb62 610 PANTHER PTHR10937:SF0 1 610 0.0 T 21-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 VFU_RS14720 0278f1111f2824cad15a33c97aaceb62 610 Gene3D G3DSA:3.40.50.10490 245 445 3.6E-66 T 21-04-2016 VFU_RS14720 0278f1111f2824cad15a33c97aaceb62 610 Pfam PF01380 SIS domain 463 592 3.4E-24 T 21-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 VFU_RS14720 0278f1111f2824cad15a33c97aaceb62 610 Pfam PF01380 SIS domain 290 418 8.9E-32 T 21-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 VFU_RS03275 686563a31b84f55cf4bc413bfe5d58c2 246 SMART SM00967 5 81 1.6E-20 T 21-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 VFU_RS03275 686563a31b84f55cf4bc413bfe5d58c2 246 SUPERFAMILY SSF55315 3 77 4.0E-20 T 21-04-2016 IPR029064 50S ribosomal protein L30e-like VFU_RS03275 686563a31b84f55cf4bc413bfe5d58c2 246 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 243 2.0E-87 T 21-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 VFU_RS03275 686563a31b84f55cf4bc413bfe5d58c2 246 Pfam PF00588 SpoU rRNA Methylase family 97 237 2.6E-39 T 21-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VFU_RS03275 686563a31b84f55cf4bc413bfe5d58c2 246 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 3 244 43.731 T 21-04-2016 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB VFU_RS03275 686563a31b84f55cf4bc413bfe5d58c2 246 SUPERFAMILY SSF75217 69 244 6.41E-48 T 21-04-2016 IPR029028 Alpha/beta knot methyltransferases VFU_RS03275 686563a31b84f55cf4bc413bfe5d58c2 246 PANTHER PTHR12029 4 243 1.6E-81 T 21-04-2016 VFU_RS03275 686563a31b84f55cf4bc413bfe5d58c2 246 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 79 2.9E-20 T 21-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 VFU_RS03275 686563a31b84f55cf4bc413bfe5d58c2 246 Gene3D G3DSA:3.40.1280.10 92 244 1.2E-55 T 21-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VFU_RS03275 686563a31b84f55cf4bc413bfe5d58c2 246 Gene3D G3DSA:3.30.1330.30 2 77 2.6E-25 T 21-04-2016 IPR029064 50S ribosomal protein L30e-like VFU_RS01420 a4e88f9a44e2cb370c00811ddc46a4ef 161 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 3 156 31.963 T 21-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 VFU_RS01420 a4e88f9a44e2cb370c00811ddc46a4ef 161 PANTHER PTHR23046:SF2 3 161 3.6E-82 T 21-04-2016 VFU_RS01420 a4e88f9a44e2cb370c00811ddc46a4ef 161 Gene3D G3DSA:3.40.50.7700 1 157 1.9E-72 T 21-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 VFU_RS01420 a4e88f9a44e2cb370c00811ddc46a4ef 161 PIRSF PIRSF001338 1 160 9.2E-67 T 21-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 VFU_RS01420 a4e88f9a44e2cb370c00811ddc46a4ef 161 Pfam PF00731 AIR carboxylase 3 150 4.5E-63 T 21-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 VFU_RS01420 a4e88f9a44e2cb370c00811ddc46a4ef 161 PANTHER PTHR23046 3 161 3.6E-82 T 21-04-2016 VFU_RS01420 a4e88f9a44e2cb370c00811ddc46a4ef 161 SMART SM01001 1 152 2.4E-101 T 21-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 VFU_RS01420 a4e88f9a44e2cb370c00811ddc46a4ef 161 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 3 156 1.3E-65 T 21-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 VFU_RS01420 a4e88f9a44e2cb370c00811ddc46a4ef 161 SUPERFAMILY SSF52255 2 158 4.45E-65 T 21-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 VFU_RS09495 b0be37eba36e0de46949212239b216e6 474 Hamap MF_01579 Ribosomal RNA small subunit methyltransferase F [rsmF]. 5 474 64.088 T 21-04-2016 IPR023545 rRNA small subunit methyltransferase F GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VFU_RS09495 b0be37eba36e0de46949212239b216e6 474 PANTHER PTHR22807:SF38 1 368 1.0E-221 T 21-04-2016 VFU_RS09495 b0be37eba36e0de46949212239b216e6 474 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 89 103 5.1E-28 T 21-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VFU_RS09495 b0be37eba36e0de46949212239b216e6 474 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 121 131 5.1E-28 T 21-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VFU_RS09495 b0be37eba36e0de46949212239b216e6 474 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 292 309 5.1E-28 T 21-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VFU_RS09495 b0be37eba36e0de46949212239b216e6 474 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 188 200 5.1E-28 T 21-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VFU_RS09495 b0be37eba36e0de46949212239b216e6 474 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 238 254 5.1E-28 T 21-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VFU_RS09495 b0be37eba36e0de46949212239b216e6 474 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 7 103 1.6E-28 T 21-04-2016 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VFU_RS09495 b0be37eba36e0de46949212239b216e6 474 SUPERFAMILY SSF53335 5 309 7.96E-64 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS09495 b0be37eba36e0de46949212239b216e6 474 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 420 469 1.7E-12 T 21-04-2016 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VFU_RS09495 b0be37eba36e0de46949212239b216e6 474 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 40 309 1.1E-99 T 21-04-2016 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VFU_RS09495 b0be37eba36e0de46949212239b216e6 474 Pfam PF01189 16S rRNA methyltransferase RsmB/F 118 307 3.3E-49 T 21-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VFU_RS09495 b0be37eba36e0de46949212239b216e6 474 Gene3D G3DSA:3.40.50.150 100 309 2.7E-57 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS09495 b0be37eba36e0de46949212239b216e6 474 PANTHER PTHR22807 1 368 1.0E-221 T 21-04-2016 VFU_RS09495 b0be37eba36e0de46949212239b216e6 474 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 187 198 - T 21-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VFU_RS08250 fef8b26d1d81376c5fa63f6a51b25cc7 82 PANTHER PTHR35175:SF1 1 82 9.1E-39 T 21-04-2016 VFU_RS08250 fef8b26d1d81376c5fa63f6a51b25cc7 82 Pfam PF06945 Protein of unknown function (DUF1289) 11 56 4.1E-18 T 21-04-2016 IPR010710 Protein of unknown function DUF1289 VFU_RS08250 fef8b26d1d81376c5fa63f6a51b25cc7 82 PANTHER PTHR35175 1 82 9.1E-39 T 21-04-2016 VFU_RS07195 a422d2a37be5047b952611ccbafeac73 471 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 2.5E-13 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VFU_RS07195 a422d2a37be5047b952611ccbafeac73 471 Gene3D G3DSA:1.10.10.10 2 67 1.2E-22 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS07195 a422d2a37be5047b952611ccbafeac73 471 Gene3D G3DSA:3.40.640.10 144 345 6.7E-69 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VFU_RS07195 a422d2a37be5047b952611ccbafeac73 471 SMART SM00345 7 66 2.2E-13 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VFU_RS07195 a422d2a37be5047b952611ccbafeac73 471 Pfam PF00155 Aminotransferase class I and II 146 456 4.1E-33 T 21-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VFU_RS07195 a422d2a37be5047b952611ccbafeac73 471 SUPERFAMILY SSF46785 2 70 6.63E-18 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS07195 a422d2a37be5047b952611ccbafeac73 471 SUPERFAMILY SSF53383 93 467 2.69E-94 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VFU_RS07195 a422d2a37be5047b952611ccbafeac73 471 Gene3D G3DSA:3.90.1150.10 346 465 3.8E-9 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VFU_RS07195 a422d2a37be5047b952611ccbafeac73 471 PANTHER PTHR11751 84 466 4.6E-167 T 21-04-2016 VFU_RS07195 a422d2a37be5047b952611ccbafeac73 471 PANTHER PTHR11751:SF314 84 466 4.6E-167 T 21-04-2016 VFU_RS04705 9533a4548c39a4642bd65bbad4a45c25 414 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 21-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VFU_RS04705 9533a4548c39a4642bd65bbad4a45c25 414 SMART SM00487 22 222 4.5E-55 T 21-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VFU_RS04705 9533a4548c39a4642bd65bbad4a45c25 414 Gene3D G3DSA:3.40.50.300 2 213 1.0E-74 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS04705 9533a4548c39a4642bd65bbad4a45c25 414 Pfam PF00271 Helicase conserved C-terminal domain 234 341 2.4E-31 T 21-04-2016 IPR001650 Helicase, C-terminal VFU_RS04705 9533a4548c39a4642bd65bbad4a45c25 414 Pfam PF00270 DEAD/DEAH box helicase 27 195 9.6E-47 T 21-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VFU_RS04705 9533a4548c39a4642bd65bbad4a45c25 414 SMART SM00490 260 341 3.7E-30 T 21-04-2016 IPR001650 Helicase, C-terminal VFU_RS04705 9533a4548c39a4642bd65bbad4a45c25 414 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 3 414 50.043 T 21-04-2016 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 VFU_RS04705 9533a4548c39a4642bd65bbad4a45c25 414 PANTHER PTHR24031:SF334 2 383 7.1E-200 T 21-04-2016 VFU_RS04705 9533a4548c39a4642bd65bbad4a45c25 414 PANTHER PTHR24031 2 383 7.1E-200 T 21-04-2016 VFU_RS04705 9533a4548c39a4642bd65bbad4a45c25 414 Gene3D G3DSA:3.40.50.300 214 372 9.7E-50 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS04705 9533a4548c39a4642bd65bbad4a45c25 414 SUPERFAMILY SSF52540 76 358 9.77E-67 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS00060 a469ba4618778423ed9d36b9ad4c17aa 327 PANTHER PTHR10264:SF80 1 144 1.4E-106 T 21-04-2016 VFU_RS00060 a469ba4618778423ed9d36b9ad4c17aa 327 PANTHER PTHR10264:SF80 174 322 1.4E-106 T 21-04-2016 VFU_RS00060 a469ba4618778423ed9d36b9ad4c17aa 327 PANTHER PTHR10264 1 144 1.4E-106 T 21-04-2016 IPR001972 Stomatin family GO:0016020 VFU_RS00060 a469ba4618778423ed9d36b9ad4c17aa 327 PANTHER PTHR10264 174 322 1.4E-106 T 21-04-2016 IPR001972 Stomatin family GO:0016020 VFU_RS00060 a469ba4618778423ed9d36b9ad4c17aa 327 TIGRFAM TIGR01932 hflC: HflC protein 1 318 5.1E-138 T 21-04-2016 IPR010200 HflC GO:0016021|GO:0052547 VFU_RS00060 a469ba4618778423ed9d36b9ad4c17aa 327 PIRSF PIRSF005651 1 326 1.5E-96 T 21-04-2016 IPR010200 HflC GO:0016021|GO:0052547 VFU_RS00060 a469ba4618778423ed9d36b9ad4c17aa 327 SMART SM00244 18 218 6.9E-45 T 21-04-2016 IPR001107 Band 7 domain VFU_RS00060 a469ba4618778423ed9d36b9ad4c17aa 327 SUPERFAMILY SSF117892 56 142 1.57E-22 T 21-04-2016 IPR001107 Band 7 domain VFU_RS00060 a469ba4618778423ed9d36b9ad4c17aa 327 SUPERFAMILY SSF117892 173 223 1.57E-22 T 21-04-2016 IPR001107 Band 7 domain VFU_RS00060 a469ba4618778423ed9d36b9ad4c17aa 327 Pfam PF01145 SPFH domain / Band 7 family 22 233 5.5E-29 T 21-04-2016 IPR001107 Band 7 domain VFU_RS01320 e4615000118a356e52aec0c49fc5ea79 135 SUPERFAMILY SSF46626 58 132 6.35E-18 T 21-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VFU_RS01320 e4615000118a356e52aec0c49fc5ea79 135 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 57 131 6.6E-15 T 21-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VFU_RS01320 e4615000118a356e52aec0c49fc5ea79 135 Gene3D G3DSA:1.10.760.10 56 133 9.8E-32 T 21-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VFU_RS01320 e4615000118a356e52aec0c49fc5ea79 135 PANTHER PTHR40942 1 135 1.3E-60 T 21-04-2016 VFU_RS01320 e4615000118a356e52aec0c49fc5ea79 135 PANTHER PTHR40942:SF1 1 135 1.3E-60 T 21-04-2016 VFU_RS01320 e4615000118a356e52aec0c49fc5ea79 135 PRINTS PR00607 Class IE cytochrome C signature 121 132 9.9E-14 T 21-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VFU_RS01320 e4615000118a356e52aec0c49fc5ea79 135 PRINTS PR00607 Class IE cytochrome C signature 78 88 9.9E-14 T 21-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VFU_RS01320 e4615000118a356e52aec0c49fc5ea79 135 PRINTS PR00607 Class IE cytochrome C signature 106 118 9.9E-14 T 21-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VFU_RS01320 e4615000118a356e52aec0c49fc5ea79 135 PRINTS PR00607 Class IE cytochrome C signature 67 78 9.9E-14 T 21-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VFU_RS18900 d73d8f15827215a94c84ff8a4f1cf399 150 PANTHER PTHR30473:SF2 47 150 1.6E-41 T 21-04-2016 VFU_RS18900 d73d8f15827215a94c84ff8a4f1cf399 150 SUPERFAMILY SSF52540 94 141 6.28E-9 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS18900 d73d8f15827215a94c84ff8a4f1cf399 150 PANTHER PTHR30473:SF2 1 29 1.6E-41 T 21-04-2016 VFU_RS18900 d73d8f15827215a94c84ff8a4f1cf399 150 Gene3D G3DSA:3.40.50.300 93 149 2.5E-12 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS18900 d73d8f15827215a94c84ff8a4f1cf399 150 Pfam PF02562 PhoH-like protein 95 150 3.4E-9 T 21-04-2016 IPR003714 PhoH-like protein GO:0005524 VFU_RS18900 d73d8f15827215a94c84ff8a4f1cf399 150 PANTHER PTHR30473 47 150 1.6E-41 T 21-04-2016 VFU_RS18900 d73d8f15827215a94c84ff8a4f1cf399 150 PANTHER PTHR30473 1 29 1.6E-41 T 21-04-2016 VFU_RS02990 493e0df50a505428a426321c8e195b3e 157 PANTHER PTHR33778 18 156 9.0E-29 T 21-04-2016 VFU_RS02990 493e0df50a505428a426321c8e195b3e 157 Pfam PF02308 MgtC family 18 140 4.6E-31 T 21-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VFU_RS02990 493e0df50a505428a426321c8e195b3e 157 PRINTS PR01837 MgtC/SapB protein signature 21 40 5.5E-33 T 21-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VFU_RS02990 493e0df50a505428a426321c8e195b3e 157 PRINTS PR01837 MgtC/SapB protein signature 40 58 5.5E-33 T 21-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VFU_RS02990 493e0df50a505428a426321c8e195b3e 157 PRINTS PR01837 MgtC/SapB protein signature 67 89 5.5E-33 T 21-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VFU_RS02990 493e0df50a505428a426321c8e195b3e 157 PRINTS PR01837 MgtC/SapB protein signature 94 118 5.5E-33 T 21-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VFU_RS04585 069aa00323d499dd76e14bd7062f10f9 446 PANTHER PTHR22573 3 443 6.8E-177 T 21-04-2016 VFU_RS04585 069aa00323d499dd76e14bd7062f10f9 446 Gene3D G3DSA:3.40.120.10 252 362 6.1E-32 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VFU_RS04585 069aa00323d499dd76e14bd7062f10f9 446 Gene3D G3DSA:3.40.120.10 5 151 4.4E-48 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VFU_RS04585 069aa00323d499dd76e14bd7062f10f9 446 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 378 442 3.0E-12 T 21-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VFU_RS04585 069aa00323d499dd76e14bd7062f10f9 446 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 255 2.8E-19 T 21-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VFU_RS04585 069aa00323d499dd76e14bd7062f10f9 446 SUPERFAMILY SSF53738 157 257 1.18E-29 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VFU_RS04585 069aa00323d499dd76e14bd7062f10f9 446 Gene3D G3DSA:3.40.120.10 177 251 5.1E-26 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VFU_RS04585 069aa00323d499dd76e14bd7062f10f9 446 SUPERFAMILY SSF53738 4 182 1.84E-49 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VFU_RS04585 069aa00323d499dd76e14bd7062f10f9 446 SUPERFAMILY SSF55957 358 443 1.28E-21 T 21-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VFU_RS04585 069aa00323d499dd76e14bd7062f10f9 446 Gene3D G3DSA:3.30.310.50 363 443 2.9E-15 T 21-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VFU_RS04585 069aa00323d499dd76e14bd7062f10f9 446 PANTHER PTHR22573:SF15 3 443 6.8E-177 T 21-04-2016 VFU_RS04585 069aa00323d499dd76e14bd7062f10f9 446 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 259 368 1.2E-31 T 21-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VFU_RS04585 069aa00323d499dd76e14bd7062f10f9 446 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 4 445 47.192 T 21-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VFU_RS04585 069aa00323d499dd76e14bd7062f10f9 446 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 137 6.4E-46 T 21-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VFU_RS04585 069aa00323d499dd76e14bd7062f10f9 446 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 97 106 - T 21-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VFU_RS04585 069aa00323d499dd76e14bd7062f10f9 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 250 5.1E-13 T 21-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VFU_RS04585 069aa00323d499dd76e14bd7062f10f9 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 175 194 5.1E-13 T 21-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VFU_RS04585 069aa00323d499dd76e14bd7062f10f9 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 96 110 5.1E-13 T 21-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VFU_RS04585 069aa00323d499dd76e14bd7062f10f9 446 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 8 443 2.0E-202 T 21-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VFU_RS04585 069aa00323d499dd76e14bd7062f10f9 446 SUPERFAMILY SSF53738 259 366 2.12E-30 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VFU_RS02890 4b95182de3e788ba2caa962dcec0af1e 105 SUPERFAMILY SSF47598 3 103 8.45E-57 T 21-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 VFU_RS02890 4b95182de3e788ba2caa962dcec0af1e 105 Gene3D G3DSA:1.10.140.10 2 104 1.0E-62 T 21-04-2016 IPR023453 Methionine repressor MetJ domain VFU_RS02890 4b95182de3e788ba2caa962dcec0af1e 105 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 5.0E-48 T 21-04-2016 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 VFU_RS02890 4b95182de3e788ba2caa962dcec0af1e 105 Pfam PF01340 Met Apo-repressor, MetJ 3 99 2.1E-59 T 21-04-2016 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 VFU_RS02890 4b95182de3e788ba2caa962dcec0af1e 105 Hamap MF_00744 Met repressor [metJ]. 1 105 34.758 T 21-04-2016 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 VFU_RS01240 a2cfed4a973eacef0c80023f1774297e 445 Gene3D G3DSA:1.10.510.10 161 277 8.6E-34 T 21-04-2016 VFU_RS01240 a2cfed4a973eacef0c80023f1774297e 445 PANTHER PTHR24362 60 336 3.8E-56 T 21-04-2016 VFU_RS01240 a2cfed4a973eacef0c80023f1774297e 445 Pfam PF00069 Protein kinase domain 78 278 2.0E-39 T 21-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VFU_RS01240 a2cfed4a973eacef0c80023f1774297e 445 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 197 209 - T 21-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 VFU_RS01240 a2cfed4a973eacef0c80023f1774297e 445 PANTHER PTHR24362:SF282 60 336 3.8E-56 T 21-04-2016 VFU_RS01240 a2cfed4a973eacef0c80023f1774297e 445 Gene3D G3DSA:3.30.200.20 72 160 1.5E-19 T 21-04-2016 VFU_RS01240 a2cfed4a973eacef0c80023f1774297e 445 SMART SM00220 78 325 5.2E-28 T 21-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VFU_RS01240 a2cfed4a973eacef0c80023f1774297e 445 SUPERFAMILY SSF56112 67 303 2.02E-54 T 21-04-2016 IPR011009 Protein kinase-like domain VFU_RS12870 9d09c8f82c2f3f14290ae9d3488054c2 373 PANTHER PTHR30474 1 371 2.9E-176 T 21-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 VFU_RS12870 9d09c8f82c2f3f14290ae9d3488054c2 373 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 20 367 5.7E-136 T 21-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 VFU_RS12870 9d09c8f82c2f3f14290ae9d3488054c2 373 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 324 348 - T 21-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 VFU_RS12870 9d09c8f82c2f3f14290ae9d3488054c2 373 PANTHER PTHR30474:SF1 1 371 2.9E-176 T 21-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 VFU_RS12870 9d09c8f82c2f3f14290ae9d3488054c2 373 Pfam PF01098 Cell cycle protein 24 367 6.8E-113 T 21-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 VFU_RS01675 f295d4cee03c21f38e47d62f593af3fb 213 PANTHER PTHR39453:SF1 2 212 9.9E-79 T 21-04-2016 VFU_RS01675 f295d4cee03c21f38e47d62f593af3fb 213 PIRSF PIRSF010130 1 213 2.8E-84 T 21-04-2016 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00561+2.3.1.22|KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013|MetaCyc: PWY-7420|UniPathway: UPA00621 VFU_RS01675 f295d4cee03c21f38e47d62f593af3fb 213 Pfam PF06130 Phosphate propanoyltransferase 138 203 4.8E-19 T 21-04-2016 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00561+2.3.1.22|KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013|MetaCyc: PWY-7420|UniPathway: UPA00621 VFU_RS01675 f295d4cee03c21f38e47d62f593af3fb 213 Pfam PF06130 Phosphate propanoyltransferase 29 108 2.2E-28 T 21-04-2016 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00561+2.3.1.22|KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013|MetaCyc: PWY-7420|UniPathway: UPA00621 VFU_RS01675 f295d4cee03c21f38e47d62f593af3fb 213 PANTHER PTHR39453 2 212 9.9E-79 T 21-04-2016 VFU_RS00370 675072d08eec0377e87645540c34af00 497 Pfam PF02541 Ppx/GppA phosphatase family 23 302 2.8E-87 T 21-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 VFU_RS00370 675072d08eec0377e87645540c34af00 497 Gene3D G3DSA:3.30.420.40 5 129 3.8E-42 T 21-04-2016 VFU_RS00370 675072d08eec0377e87645540c34af00 497 PANTHER PTHR30005 1 492 6.7E-296 T 21-04-2016 VFU_RS00370 675072d08eec0377e87645540c34af00 497 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 2 495 58.13 T 21-04-2016 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40|UniPathway: UPA00908 VFU_RS00370 675072d08eec0377e87645540c34af00 497 PIRSF PIRSF001267 1 497 6.5E-178 T 21-04-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 VFU_RS00370 675072d08eec0377e87645540c34af00 497 SUPERFAMILY SSF53067 9 129 1.42E-35 T 21-04-2016 VFU_RS00370 675072d08eec0377e87645540c34af00 497 SUPERFAMILY SSF109604 309 495 3.14E-38 T 21-04-2016 VFU_RS00370 675072d08eec0377e87645540c34af00 497 SUPERFAMILY SSF53067 134 304 4.75E-42 T 21-04-2016 VFU_RS00370 675072d08eec0377e87645540c34af00 497 PANTHER PTHR30005:SF2 1 492 6.7E-296 T 21-04-2016 VFU_RS00370 675072d08eec0377e87645540c34af00 497 Gene3D G3DSA:3.30.420.150 130 303 1.2E-49 T 21-04-2016 VFU_RS07120 392ac2293bd365433105153e11caf3ce 568 Pfam PF11604 Copper binding periplasmic protein CusF 497 562 1.1E-18 T 21-04-2016 IPR021647 Copper binding periplasmic protein CusF VFU_RS07120 392ac2293bd365433105153e11caf3ce 568 Pfam PF11604 Copper binding periplasmic protein CusF 417 482 7.8E-22 T 21-04-2016 IPR021647 Copper binding periplasmic protein CusF VFU_RS07120 392ac2293bd365433105153e11caf3ce 568 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 109 317 5.1E-77 T 21-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VFU_RS07120 392ac2293bd365433105153e11caf3ce 568 PANTHER PTHR30097 48 409 2.2E-88 T 21-04-2016 VFU_RS07120 392ac2293bd365433105153e11caf3ce 568 SUPERFAMILY SSF111369 130 322 1.57E-14 T 21-04-2016 VFU_RS07120 392ac2293bd365433105153e11caf3ce 568 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 99 390 5.3E-31 T 21-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 VFU_RS07120 392ac2293bd365433105153e11caf3ce 568 Gene3D G3DSA:2.40.50.100 132 160 8.1E-10 T 21-04-2016 VFU_RS07120 392ac2293bd365433105153e11caf3ce 568 Gene3D G3DSA:2.40.50.100 211 241 8.1E-10 T 21-04-2016 VFU_RS07120 392ac2293bd365433105153e11caf3ce 568 PANTHER PTHR30097:SF3 48 409 2.2E-88 T 21-04-2016 VFU_RS02135 3d182e404f860ba6cb08c75f20599762 133 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 133 18.007 T 21-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 VFU_RS02135 3d182e404f860ba6cb08c75f20599762 133 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 3.1E-26 T 21-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 VFU_RS02135 3d182e404f860ba6cb08c75f20599762 133 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 3.1E-26 T 21-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 VFU_RS02135 3d182e404f860ba6cb08c75f20599762 133 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 3.1E-26 T 21-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 VFU_RS02135 3d182e404f860ba6cb08c75f20599762 133 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 5.2E-34 T 21-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 VFU_RS02135 3d182e404f860ba6cb08c75f20599762 133 Pfam PF02416 mttA/Hcf106 family 4 38 7.1E-6 T 21-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 VFU_RS02135 3d182e404f860ba6cb08c75f20599762 133 PANTHER PTHR33162 2 128 3.3E-48 T 21-04-2016 VFU_RS02135 3d182e404f860ba6cb08c75f20599762 133 PANTHER PTHR33162:SF4 2 128 3.3E-48 T 21-04-2016 VFU_RS02135 3d182e404f860ba6cb08c75f20599762 133 Gene3D G3DSA:1.10.287.880 40 73 4.6E-4 T 21-04-2016 VFU_RS22240 1ffa73647e503c396724026f7a56833a 375 PANTHER PTHR23501 16 366 5.7E-162 T 21-04-2016 VFU_RS22240 1ffa73647e503c396724026f7a56833a 375 PANTHER PTHR23501:SF89 16 366 5.7E-162 T 21-04-2016 VFU_RS22240 1ffa73647e503c396724026f7a56833a 375 Gene3D G3DSA:1.20.1250.20 21 202 8.9E-27 T 21-04-2016 VFU_RS22240 1ffa73647e503c396724026f7a56833a 375 SUPERFAMILY SSF103473 14 369 2.09E-50 T 21-04-2016 IPR020846 Major facilitator superfamily domain VFU_RS22240 1ffa73647e503c396724026f7a56833a 375 Pfam PF07690 Major Facilitator Superfamily 30 359 1.0E-31 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VFU_RS22240 1ffa73647e503c396724026f7a56833a 375 Gene3D G3DSA:1.20.1250.20 214 370 6.0E-13 T 21-04-2016 VFU_RS06470 7a0d15d918ff64a68f8cef63862404c7 1044 Gene3D G3DSA:2.40.50.140 28 121 3.3E-34 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS06470 7a0d15d918ff64a68f8cef63862404c7 1044 Hamap MF_00970 Ribonuclease E [rne]. 1 1031 35.678 T 21-04-2016 IPR028878 Ribonuclease E GO:0006396|GO:0008995 VFU_RS06470 7a0d15d918ff64a68f8cef63862404c7 1044 Pfam PF00575 S1 RNA binding domain 34 115 6.5E-14 T 21-04-2016 IPR003029 S1 domain GO:0003676 VFU_RS06470 7a0d15d918ff64a68f8cef63862404c7 1044 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 10 421 3.1E-170 T 21-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 VFU_RS06470 7a0d15d918ff64a68f8cef63862404c7 1044 PANTHER PTHR30001:SF1 1 842 0.0 T 21-04-2016 VFU_RS06470 7a0d15d918ff64a68f8cef63862404c7 1044 Pfam PF10150 Ribonuclease E/G family 118 387 8.5E-94 T 21-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 VFU_RS06470 7a0d15d918ff64a68f8cef63862404c7 1044 SUPERFAMILY SSF50249 37 121 1.61E-19 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS06470 7a0d15d918ff64a68f8cef63862404c7 1044 SMART SM00316 34 116 6.8E-11 T 21-04-2016 IPR022967 RNA-binding domain, S1 VFU_RS06470 7a0d15d918ff64a68f8cef63862404c7 1044 PANTHER PTHR30001 1 842 0.0 T 21-04-2016 VFU_RS12385 979a05940920868571979dd8491522db 708 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 225 3.6E-37 T 21-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 VFU_RS12385 979a05940920868571979dd8491522db 708 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 619 692 3.1E-5 T 21-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VFU_RS12385 979a05940920868571979dd8491522db 708 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 496 589 3.5E-24 T 21-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VFU_RS12385 979a05940920868571979dd8491522db 708 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 21-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 VFU_RS12385 979a05940920868571979dd8491522db 708 Gene3D G3DSA:3.90.226.10 2 203 7.3E-62 T 21-04-2016 IPR029045 ClpP/crotonase-like domain VFU_RS12385 979a05940920868571979dd8491522db 708 Gene3D G3DSA:3.90.226.10 235 294 7.3E-62 T 21-04-2016 IPR029045 ClpP/crotonase-like domain VFU_RS12385 979a05940920868571979dd8491522db 708 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 315 494 6.3E-53 T 21-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VFU_RS12385 979a05940920868571979dd8491522db 708 SUPERFAMILY SSF52096 3 305 8.18E-66 T 21-04-2016 IPR029045 ClpP/crotonase-like domain VFU_RS12385 979a05940920868571979dd8491522db 708 PANTHER PTHR23309:SF6 7 707 0.0 T 21-04-2016 VFU_RS12385 979a05940920868571979dd8491522db 708 Hamap MF_01617 Fatty acid oxidation complex subunit alpha [fadJ]. 1 706 52.827 T 21-04-2016 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VFU_RS12385 979a05940920868571979dd8491522db 708 SUPERFAMILY SSF48179 496 604 3.49E-28 T 21-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VFU_RS12385 979a05940920868571979dd8491522db 708 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 493 518 - T 21-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VFU_RS12385 979a05940920868571979dd8491522db 708 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 6 706 0.0 T 21-04-2016 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VFU_RS12385 979a05940920868571979dd8491522db 708 Gene3D G3DSA:1.10.1040.10 624 695 1.4E-21 T 21-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VFU_RS12385 979a05940920868571979dd8491522db 708 Gene3D G3DSA:1.10.1040.10 498 590 2.5E-25 T 21-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VFU_RS12385 979a05940920868571979dd8491522db 708 PANTHER PTHR23309 7 707 0.0 T 21-04-2016 VFU_RS12385 979a05940920868571979dd8491522db 708 SUPERFAMILY SSF51735 311 494 2.31E-47 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS12385 979a05940920868571979dd8491522db 708 SUPERFAMILY SSF48179 612 706 4.68E-26 T 21-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VFU_RS12385 979a05940920868571979dd8491522db 708 Gene3D G3DSA:3.40.50.720 311 497 1.5E-50 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS05120 878815c9ed028c6306d2ae3583c68bec 301 PANTHER PTHR21621:SF0 1 298 5.3E-133 T 21-04-2016 VFU_RS05120 878815c9ed028c6306d2ae3583c68bec 301 Gene3D G3DSA:3.30.470.20 173 276 2.5E-36 T 21-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VFU_RS05120 878815c9ed028c6306d2ae3583c68bec 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 286 3.9E-89 T 21-04-2016 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 VFU_RS05120 878815c9ed028c6306d2ae3583c68bec 301 Gene3D G3DSA:3.40.50.20 8 102 7.0E-20 T 21-04-2016 IPR016185 Pre-ATP-grasp domain VFU_RS05120 878815c9ed028c6306d2ae3583c68bec 301 PANTHER PTHR21621 1 298 5.3E-133 T 21-04-2016 VFU_RS05120 878815c9ed028c6306d2ae3583c68bec 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 53.889 T 21-04-2016 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK VFU_RS05120 878815c9ed028c6306d2ae3583c68bec 301 Pfam PF08443 RimK-like ATP-grasp domain 98 286 6.6E-69 T 21-04-2016 IPR013651 ATP-grasp fold, RimK-type VFU_RS05120 878815c9ed028c6306d2ae3583c68bec 301 Gene3D G3DSA:3.30.1490.20 103 172 1.6E-7 T 21-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VFU_RS05120 878815c9ed028c6306d2ae3583c68bec 301 SUPERFAMILY SSF56059 98 288 5.58E-50 T 21-04-2016 VFU_RS03640 63a1d1f22fa9d24a864ae423e3ad8a55 324 SUPERFAMILY SSF53697 10 319 6.67E-68 T 21-04-2016 VFU_RS03640 63a1d1f22fa9d24a864ae423e3ad8a55 324 Gene3D G3DSA:3.10.580.10 193 321 4.6E-39 T 21-04-2016 VFU_RS03640 63a1d1f22fa9d24a864ae423e3ad8a55 324 Gene3D G3DSA:3.40.50.10490 11 192 3.8E-52 T 21-04-2016 VFU_RS03640 63a1d1f22fa9d24a864ae423e3ad8a55 324 SMART SM00116 211 259 0.0018 T 21-04-2016 IPR000644 CBS domain VFU_RS03640 63a1d1f22fa9d24a864ae423e3ad8a55 324 SMART SM00116 276 323 0.027 T 21-04-2016 IPR000644 CBS domain VFU_RS03640 63a1d1f22fa9d24a864ae423e3ad8a55 324 Pfam PF00571 CBS domain 269 321 5.0E-7 T 21-04-2016 IPR000644 CBS domain VFU_RS03640 63a1d1f22fa9d24a864ae423e3ad8a55 324 Pfam PF00571 CBS domain 203 259 1.5E-6 T 21-04-2016 IPR000644 CBS domain VFU_RS03640 63a1d1f22fa9d24a864ae423e3ad8a55 324 Pfam PF01380 SIS domain 44 173 7.2E-32 T 21-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 VFU_RS03640 63a1d1f22fa9d24a864ae423e3ad8a55 324 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 46 314 3.2E-114 T 21-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 VFU_RS03640 63a1d1f22fa9d24a864ae423e3ad8a55 324 PIRSF PIRSF004692 1 324 3.0E-130 T 21-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 VFU_RS03640 63a1d1f22fa9d24a864ae423e3ad8a55 324 PANTHER PTHR38418:SF1 11 200 1.9E-42 T 21-04-2016 VFU_RS03640 63a1d1f22fa9d24a864ae423e3ad8a55 324 PANTHER PTHR38418 11 200 1.9E-42 T 21-04-2016 VFU_RS05705 a20b858ebbddc3297d92fe0f07750c3f 293 PANTHER PTHR18895 4 286 7.7E-108 T 21-04-2016 VFU_RS05705 a20b858ebbddc3297d92fe0f07750c3f 293 Gene3D G3DSA:3.40.50.150 92 281 1.7E-65 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS05705 a20b858ebbddc3297d92fe0f07750c3f 293 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 187 193 - T 21-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VFU_RS05705 a20b858ebbddc3297d92fe0f07750c3f 293 SUPERFAMILY SSF53335 7 282 3.52E-57 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS05705 a20b858ebbddc3297d92fe0f07750c3f 293 Pfam PF13847 Methyltransferase domain 118 247 1.8E-16 T 21-04-2016 IPR025714 Methyltransferase domain VFU_RS05705 a20b858ebbddc3297d92fe0f07750c3f 293 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 29 278 4.7E-90 T 21-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 VFU_RS05705 a20b858ebbddc3297d92fe0f07750c3f 293 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 7 284 2.6E-77 T 21-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 VFU_RS05705 a20b858ebbddc3297d92fe0f07750c3f 293 PANTHER PTHR18895:SF64 4 286 7.7E-108 T 21-04-2016 VFU_RS05705 a20b858ebbddc3297d92fe0f07750c3f 293 Gene3D G3DSA:1.10.8.10 6 90 5.8E-30 T 21-04-2016 VFU_RS05705 a20b858ebbddc3297d92fe0f07750c3f 293 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 7 282 44.644 T 21-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 VFU_RS09340 ddff8f8cb5fec3f9692cab5106dd6f89 414 PRINTS PR00447 Natural resistance-associated macrophage protein signature 155 176 2.0E-30 T 21-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 VFU_RS09340 ddff8f8cb5fec3f9692cab5106dd6f89 414 PRINTS PR00447 Natural resistance-associated macrophage protein signature 102 128 2.0E-30 T 21-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 VFU_RS09340 ddff8f8cb5fec3f9692cab5106dd6f89 414 PRINTS PR00447 Natural resistance-associated macrophage protein signature 304 323 2.0E-30 T 21-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 VFU_RS09340 ddff8f8cb5fec3f9692cab5106dd6f89 414 PRINTS PR00447 Natural resistance-associated macrophage protein signature 130 149 2.0E-30 T 21-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 VFU_RS09340 ddff8f8cb5fec3f9692cab5106dd6f89 414 PRINTS PR00447 Natural resistance-associated macrophage protein signature 205 228 2.0E-30 T 21-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 VFU_RS09340 ddff8f8cb5fec3f9692cab5106dd6f89 414 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 8 414 34.748 T 21-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 VFU_RS09340 ddff8f8cb5fec3f9692cab5106dd6f89 414 PANTHER PTHR11706 20 414 1.5E-207 T 21-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 VFU_RS09340 ddff8f8cb5fec3f9692cab5106dd6f89 414 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 26 382 7.4E-98 T 21-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 VFU_RS09340 ddff8f8cb5fec3f9692cab5106dd6f89 414 PANTHER PTHR11706:SF42 20 414 1.5E-207 T 21-04-2016 VFU_RS09340 ddff8f8cb5fec3f9692cab5106dd6f89 414 Pfam PF01566 Natural resistance-associated macrophage protein 43 389 3.5E-121 T 21-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 VFU_RS13610 77282fad71ed3476f82f08059a69364d 301 Pfam PF03466 LysR substrate binding domain 94 299 7.9E-38 T 21-04-2016 IPR005119 LysR, substrate-binding VFU_RS13610 77282fad71ed3476f82f08059a69364d 301 SUPERFAMILY SSF46785 4 117 1.25E-15 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS13610 77282fad71ed3476f82f08059a69364d 301 SUPERFAMILY SSF53850 95 300 2.64E-35 T 21-04-2016 VFU_RS13610 77282fad71ed3476f82f08059a69364d 301 Gene3D G3DSA:3.40.190.10 95 191 4.1E-21 T 21-04-2016 VFU_RS13610 77282fad71ed3476f82f08059a69364d 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 68 1.7E-15 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS13610 77282fad71ed3476f82f08059a69364d 301 Gene3D G3DSA:3.40.190.10 192 268 5.1E-14 T 21-04-2016 VFU_RS13610 77282fad71ed3476f82f08059a69364d 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.1E-5 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS13610 77282fad71ed3476f82f08059a69364d 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.1E-5 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS13610 77282fad71ed3476f82f08059a69364d 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.1E-5 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS13610 77282fad71ed3476f82f08059a69364d 301 PANTHER PTHR30346:SF10 3 301 2.7E-200 T 21-04-2016 VFU_RS13610 77282fad71ed3476f82f08059a69364d 301 PANTHER PTHR30346 3 301 2.7E-200 T 21-04-2016 VFU_RS13610 77282fad71ed3476f82f08059a69364d 301 Gene3D G3DSA:1.10.10.10 6 84 8.0E-19 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS01585 81d51a3ec801bc2586039e1b8177b3d6 305 SUPERFAMILY SSF55681 8 292 1.49E-134 T 21-04-2016 VFU_RS01585 81d51a3ec801bc2586039e1b8177b3d6 305 PANTHER PTHR30075 1 305 1.7E-279 T 21-04-2016 VFU_RS01585 81d51a3ec801bc2586039e1b8177b3d6 305 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 301 2.4E-174 T 21-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VFU_RS01585 81d51a3ec801bc2586039e1b8177b3d6 305 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 291 1.1E-149 T 21-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VFU_RS01585 81d51a3ec801bc2586039e1b8177b3d6 305 Gene3D G3DSA:3.30.930.10 4 214 5.4E-106 T 21-04-2016 VFU_RS01585 81d51a3ec801bc2586039e1b8177b3d6 305 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 293 62.004 T 21-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VFU_RS01585 81d51a3ec801bc2586039e1b8177b3d6 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 4.2E-71 T 21-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VFU_RS01585 81d51a3ec801bc2586039e1b8177b3d6 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 4.2E-71 T 21-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VFU_RS01585 81d51a3ec801bc2586039e1b8177b3d6 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 253 269 4.2E-71 T 21-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VFU_RS01585 81d51a3ec801bc2586039e1b8177b3d6 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 4.2E-71 T 21-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VFU_RS01585 81d51a3ec801bc2586039e1b8177b3d6 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 4.2E-71 T 21-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VFU_RS01585 81d51a3ec801bc2586039e1b8177b3d6 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 4.2E-71 T 21-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VFU_RS01585 81d51a3ec801bc2586039e1b8177b3d6 305 Gene3D G3DSA:1.20.58.180 215 298 3.1E-36 T 21-04-2016 VFU_RS04720 36f278c264b03d90084068b056ca3701 310 Pfam PF00472 RF-1 domain 174 282 4.6E-39 T 21-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VFU_RS04720 36f278c264b03d90084068b056ca3701 310 PANTHER PTHR11075:SF6 3 308 1.6E-148 T 21-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 VFU_RS04720 36f278c264b03d90084068b056ca3701 310 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 2 308 7.6E-152 T 21-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 VFU_RS04720 36f278c264b03d90084068b056ca3701 310 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 190 206 - T 21-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VFU_RS04720 36f278c264b03d90084068b056ca3701 310 PANTHER PTHR11075 3 308 1.6E-148 T 21-04-2016 VFU_RS04720 36f278c264b03d90084068b056ca3701 310 Gene3D G3DSA:3.30.160.20 173 251 3.0E-37 T 21-04-2016 IPR014720 Double-stranded RNA-binding domain VFU_RS04720 36f278c264b03d90084068b056ca3701 310 SMART SM00937 30 140 8.4E-55 T 21-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 VFU_RS04720 36f278c264b03d90084068b056ca3701 310 Gene3D G3DSA:1.20.58.410 1 61 9.3E-15 T 21-04-2016 VFU_RS04720 36f278c264b03d90084068b056ca3701 310 Pfam PF03462 PCRF domain 2 164 7.6E-51 T 21-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 VFU_RS04720 36f278c264b03d90084068b056ca3701 310 SUPERFAMILY SSF75620 1 309 2.35E-128 T 21-04-2016 VFU_RS13500 7e31673948dc939ac837d1609f827809 143 Pfam PF00334 Nucleoside diphosphate kinase 4 137 9.3E-57 T 21-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VFU_RS13500 7e31673948dc939ac837d1609f827809 143 Gene3D G3DSA:3.30.70.141 1 140 1.3E-60 T 21-04-2016 VFU_RS13500 7e31673948dc939ac837d1609f827809 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 8.9E-38 T 21-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VFU_RS13500 7e31673948dc939ac837d1609f827809 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 8.9E-38 T 21-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VFU_RS13500 7e31673948dc939ac837d1609f827809 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 8.9E-38 T 21-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VFU_RS13500 7e31673948dc939ac837d1609f827809 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 8.9E-38 T 21-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VFU_RS13500 7e31673948dc939ac837d1609f827809 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 8.9E-38 T 21-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VFU_RS13500 7e31673948dc939ac837d1609f827809 143 PANTHER PTHR11349 1 140 1.7E-77 T 21-04-2016 VFU_RS13500 7e31673948dc939ac837d1609f827809 143 SUPERFAMILY SSF54919 1 140 1.44E-60 T 21-04-2016 VFU_RS13500 7e31673948dc939ac837d1609f827809 143 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 21-04-2016 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VFU_RS13500 7e31673948dc939ac837d1609f827809 143 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 35.038 T 21-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VFU_RS13500 7e31673948dc939ac837d1609f827809 143 SMART SM00562 3 140 5.7E-89 T 21-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VFU_RS04455 15aaa178efccc82547921b7b86b0315d 638 SUPERFAMILY SSF55545 126 257 3.74E-27 T 21-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like VFU_RS04455 15aaa178efccc82547921b7b86b0315d 638 SUPERFAMILY SSF51445 258 618 1.15E-128 T 21-04-2016 IPR017853 Glycoside hydrolase superfamily VFU_RS04455 15aaa178efccc82547921b7b86b0315d 638 Gene3D G3DSA:3.30.379.10 133 255 1.9E-23 T 21-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like VFU_RS04455 15aaa178efccc82547921b7b86b0315d 638 PANTHER PTHR22600 73 318 4.2E-201 T 21-04-2016 VFU_RS04455 15aaa178efccc82547921b7b86b0315d 638 PANTHER PTHR22600 334 636 4.2E-201 T 21-04-2016 VFU_RS04455 15aaa178efccc82547921b7b86b0315d 638 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 138 255 2.2E-18 T 21-04-2016 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VFU_RS04455 15aaa178efccc82547921b7b86b0315d 638 PANTHER PTHR22600:SF21 73 318 4.2E-201 T 21-04-2016 VFU_RS04455 15aaa178efccc82547921b7b86b0315d 638 PANTHER PTHR22600:SF21 334 636 4.2E-201 T 21-04-2016 VFU_RS04455 15aaa178efccc82547921b7b86b0315d 638 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 258 605 2.7E-120 T 21-04-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VFU_RS04455 15aaa178efccc82547921b7b86b0315d 638 PRINTS PR00738 Glycosyl hydrolase family 20 signature 422 435 1.2E-51 T 21-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VFU_RS04455 15aaa178efccc82547921b7b86b0315d 638 PRINTS PR00738 Glycosyl hydrolase family 20 signature 351 368 1.2E-51 T 21-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VFU_RS04455 15aaa178efccc82547921b7b86b0315d 638 PRINTS PR00738 Glycosyl hydrolase family 20 signature 587 604 1.2E-51 T 21-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VFU_RS04455 15aaa178efccc82547921b7b86b0315d 638 PRINTS PR00738 Glycosyl hydrolase family 20 signature 217 237 1.2E-51 T 21-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VFU_RS04455 15aaa178efccc82547921b7b86b0315d 638 PRINTS PR00738 Glycosyl hydrolase family 20 signature 281 302 1.2E-51 T 21-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VFU_RS04455 15aaa178efccc82547921b7b86b0315d 638 PRINTS PR00738 Glycosyl hydrolase family 20 signature 400 418 1.2E-51 T 21-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VFU_RS04455 15aaa178efccc82547921b7b86b0315d 638 PRINTS PR00738 Glycosyl hydrolase family 20 signature 569 585 1.2E-51 T 21-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VFU_RS04455 15aaa178efccc82547921b7b86b0315d 638 PRINTS PR00738 Glycosyl hydrolase family 20 signature 252 269 1.2E-51 T 21-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VFU_RS04455 15aaa178efccc82547921b7b86b0315d 638 Gene3D G3DSA:3.20.20.80 256 636 1.9E-136 T 21-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VFU_RS10005 51b7c5a5465fc7aa5981c253c8e1ac8a 558 PANTHER PTHR11615:SF112 1 134 9.1E-176 T 21-04-2016 VFU_RS10005 51b7c5a5465fc7aa5981c253c8e1ac8a 558 PANTHER PTHR11615:SF112 153 547 9.1E-176 T 21-04-2016 VFU_RS10005 51b7c5a5465fc7aa5981c253c8e1ac8a 558 Gene3D G3DSA:3.40.50.740 1 14 7.0E-47 T 21-04-2016 VFU_RS10005 51b7c5a5465fc7aa5981c253c8e1ac8a 558 Gene3D G3DSA:3.40.50.740 221 352 7.0E-47 T 21-04-2016 VFU_RS10005 51b7c5a5465fc7aa5981c253c8e1ac8a 558 Gene3D G3DSA:3.40.228.10 15 203 1.1E-74 T 21-04-2016 VFU_RS10005 51b7c5a5465fc7aa5981c253c8e1ac8a 558 Pfam PF01568 Molydopterin dinucleotide binding domain 417 524 6.9E-30 T 21-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 VFU_RS10005 51b7c5a5465fc7aa5981c253c8e1ac8a 558 PANTHER PTHR11615 1 134 9.1E-176 T 21-04-2016 VFU_RS10005 51b7c5a5465fc7aa5981c253c8e1ac8a 558 PANTHER PTHR11615 153 547 9.1E-176 T 21-04-2016 VFU_RS10005 51b7c5a5465fc7aa5981c253c8e1ac8a 558 SUPERFAMILY SSF50692 407 544 9.95E-46 T 21-04-2016 IPR009010 Aspartate decarboxylase-like domain VFU_RS10005 51b7c5a5465fc7aa5981c253c8e1ac8a 558 SUPERFAMILY SSF53706 1 421 3.01E-139 T 21-04-2016 VFU_RS10005 51b7c5a5465fc7aa5981c253c8e1ac8a 558 Gene3D G3DSA:2.40.40.20 368 530 3.6E-54 T 21-04-2016 VFU_RS10005 51b7c5a5465fc7aa5981c253c8e1ac8a 558 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 1 527 9.0E-205 T 21-04-2016 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 VFU_RS10005 51b7c5a5465fc7aa5981c253c8e1ac8a 558 Pfam PF00384 Molybdopterin oxidoreductase 1 330 1.1E-69 T 21-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 VFU_RS08975 5d58f9f9acd5eb33095e3cf074d3c024 235 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 8 231 2.3E-35 T 21-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 VFU_RS08975 5d58f9f9acd5eb33095e3cf074d3c024 235 PANTHER PTHR23344 3 235 3.6E-66 T 21-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 VFU_RS08975 5d58f9f9acd5eb33095e3cf074d3c024 235 Gene3D G3DSA:3.20.20.190 2 233 2.1E-64 T 21-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 VFU_RS08975 5d58f9f9acd5eb33095e3cf074d3c024 235 SUPERFAMILY SSF51695 3 234 4.78E-64 T 21-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 VFU_RS08975 5d58f9f9acd5eb33095e3cf074d3c024 235 PANTHER PTHR23344:SF20 3 235 3.6E-66 T 21-04-2016 VFU_RS12465 6b9d2e12ac14cba93f16afaebf30fd7a 764 Gene3D G3DSA:2.70.150.10 214 362 9.9E-26 T 21-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 VFU_RS12465 6b9d2e12ac14cba93f16afaebf30fd7a 764 Gene3D G3DSA:3.30.70.100 69 133 4.7E-17 T 21-04-2016 VFU_RS12465 6b9d2e12ac14cba93f16afaebf30fd7a 764 ProSitePatterns PS01047 Heavy-metal-associated domain. 75 104 - T 21-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 VFU_RS12465 6b9d2e12ac14cba93f16afaebf30fd7a 764 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 211 759 6.3E-177 T 21-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 VFU_RS12465 6b9d2e12ac14cba93f16afaebf30fd7a 764 SUPERFAMILY SSF81665 362 456 5.75E-19 T 21-04-2016 VFU_RS12465 6b9d2e12ac14cba93f16afaebf30fd7a 764 SUPERFAMILY SSF81665 214 265 5.75E-19 T 21-04-2016 VFU_RS12465 6b9d2e12ac14cba93f16afaebf30fd7a 764 SUPERFAMILY SSF81665 706 745 5.75E-19 T 21-04-2016 VFU_RS12465 6b9d2e12ac14cba93f16afaebf30fd7a 764 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 211 567 9.6E-97 T 21-04-2016 VFU_RS12465 6b9d2e12ac14cba93f16afaebf30fd7a 764 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 234 735 1.1E-86 T 21-04-2016 IPR001757 P-type ATPase GO:0016021 VFU_RS12465 6b9d2e12ac14cba93f16afaebf30fd7a 764 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 462 476 4.8E-28 T 21-04-2016 VFU_RS12465 6b9d2e12ac14cba93f16afaebf30fd7a 764 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 311 325 4.8E-28 T 21-04-2016 VFU_RS12465 6b9d2e12ac14cba93f16afaebf30fd7a 764 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 680 692 4.8E-28 T 21-04-2016 VFU_RS12465 6b9d2e12ac14cba93f16afaebf30fd7a 764 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 657 676 4.8E-28 T 21-04-2016 VFU_RS12465 6b9d2e12ac14cba93f16afaebf30fd7a 764 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 584 595 4.8E-28 T 21-04-2016 VFU_RS12465 6b9d2e12ac14cba93f16afaebf30fd7a 764 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 606 616 4.8E-28 T 21-04-2016 VFU_RS12465 6b9d2e12ac14cba93f16afaebf30fd7a 764 PRINTS PR00941 Cadmium-transporting ATPase signature 73 82 4.3E-8 T 21-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 VFU_RS12465 6b9d2e12ac14cba93f16afaebf30fd7a 764 PRINTS PR00941 Cadmium-transporting ATPase signature 346 360 4.3E-8 T 21-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 VFU_RS12465 6b9d2e12ac14cba93f16afaebf30fd7a 764 PRINTS PR00941 Cadmium-transporting ATPase signature 246 266 4.3E-8 T 21-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 VFU_RS12465 6b9d2e12ac14cba93f16afaebf30fd7a 764 PRINTS PR00941 Cadmium-transporting ATPase signature 84 105 4.3E-8 T 21-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 VFU_RS12465 6b9d2e12ac14cba93f16afaebf30fd7a 764 SUPERFAMILY SSF55008 67 134 1.14E-14 T 21-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VFU_RS12465 6b9d2e12ac14cba93f16afaebf30fd7a 764 SUPERFAMILY SSF56784 460 480 7.73E-52 T 21-04-2016 IPR023214 HAD-like domain VFU_RS12465 6b9d2e12ac14cba93f16afaebf30fd7a 764 SUPERFAMILY SSF56784 556 757 7.73E-52 T 21-04-2016 IPR023214 HAD-like domain VFU_RS12465 6b9d2e12ac14cba93f16afaebf30fd7a 764 SUPERFAMILY SSF81653 264 361 4.84E-22 T 21-04-2016 VFU_RS12465 6b9d2e12ac14cba93f16afaebf30fd7a 764 Pfam PF00403 Heavy-metal-associated domain 74 132 4.2E-10 T 21-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VFU_RS12465 6b9d2e12ac14cba93f16afaebf30fd7a 764 Pfam PF00122 E1-E2 ATPase 232 453 1.9E-62 T 21-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 VFU_RS12465 6b9d2e12ac14cba93f16afaebf30fd7a 764 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 464 470 - T 21-04-2016 IPR018303 P-type ATPase, phosphorylation site VFU_RS12465 6b9d2e12ac14cba93f16afaebf30fd7a 764 PANTHER PTHR24093 77 760 5.2E-219 T 21-04-2016 VFU_RS12465 6b9d2e12ac14cba93f16afaebf30fd7a 764 Gene3D G3DSA:3.40.50.1000 436 475 4.0E-47 T 21-04-2016 IPR023214 HAD-like domain VFU_RS12465 6b9d2e12ac14cba93f16afaebf30fd7a 764 Gene3D G3DSA:3.40.50.1000 587 723 4.0E-47 T 21-04-2016 IPR023214 HAD-like domain VFU_RS12465 6b9d2e12ac14cba93f16afaebf30fd7a 764 Pfam PF00702 haloacid dehalogenase-like hydrolase 458 671 6.8E-41 T 21-04-2016 VFU_RS12465 6b9d2e12ac14cba93f16afaebf30fd7a 764 Gene3D G3DSA:3.40.1110.10 476 586 1.3E-20 T 21-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 VFU_RS12465 6b9d2e12ac14cba93f16afaebf30fd7a 764 PANTHER PTHR24093:SF126 77 760 5.2E-219 T 21-04-2016 VFU_RS06720 39c9a8a9302e5c7f272c3114dbc12a88 285 Pfam PF12833 Helix-turn-helix domain 29 108 7.5E-19 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VFU_RS06720 39c9a8a9302e5c7f272c3114dbc12a88 285 SMART SM00871 131 285 7.3E-37 T 21-04-2016 IPR010499 Bacterial transcription activator, effector binding VFU_RS06720 39c9a8a9302e5c7f272c3114dbc12a88 285 Gene3D G3DSA:3.20.80.10 132 285 6.2E-43 T 21-04-2016 IPR011256 Regulatory factor, effector binding domain VFU_RS06720 39c9a8a9302e5c7f272c3114dbc12a88 285 SUPERFAMILY SSF46689 6 56 7.62E-10 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS06720 39c9a8a9302e5c7f272c3114dbc12a88 285 Pfam PF06445 GyrI-like small molecule binding domain 133 285 6.8E-30 T 21-04-2016 IPR029442 GyrI-like small molecule binding domain VFU_RS06720 39c9a8a9302e5c7f272c3114dbc12a88 285 SMART SM00342 23 107 1.0E-21 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VFU_RS06720 39c9a8a9302e5c7f272c3114dbc12a88 285 PANTHER PTHR40055 26 285 4.7E-49 T 21-04-2016 VFU_RS06720 39c9a8a9302e5c7f272c3114dbc12a88 285 Gene3D G3DSA:1.10.10.60 61 122 7.9E-17 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS06720 39c9a8a9302e5c7f272c3114dbc12a88 285 PANTHER PTHR40055:SF1 26 285 4.7E-49 T 21-04-2016 VFU_RS06720 39c9a8a9302e5c7f272c3114dbc12a88 285 Gene3D G3DSA:1.10.10.60 6 60 1.1E-18 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS06720 39c9a8a9302e5c7f272c3114dbc12a88 285 SUPERFAMILY SSF46689 60 118 2.02E-9 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS06720 39c9a8a9302e5c7f272c3114dbc12a88 285 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 60 103 - T 21-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VFU_RS06720 39c9a8a9302e5c7f272c3114dbc12a88 285 SUPERFAMILY SSF55136 132 285 2.75E-33 T 21-04-2016 IPR011256 Regulatory factor, effector binding domain VFU_RS13990 3461e55726f119a9e870bb41639d1a0f 56 TIGRFAM TIGR03510 XapX: XapX domain 4 50 4.3E-19 T 21-04-2016 IPR020017 XapX domain VFU_RS09610 f7f5dbb2a89858af5716a2f81d8ce919 172 SUPERFAMILY SSF54427 4 171 1.15E-42 T 21-04-2016 IPR032710 NTF2-like domain VFU_RS09610 f7f5dbb2a89858af5716a2f81d8ce919 172 PANTHER PTHR41534:SF2 1 172 2.6E-89 T 21-04-2016 VFU_RS09610 f7f5dbb2a89858af5716a2f81d8ce919 172 Pfam PF00866 Ring hydroxylating beta subunit 18 164 1.1E-47 T 21-04-2016 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 VFU_RS09610 f7f5dbb2a89858af5716a2f81d8ce919 172 PANTHER PTHR41534 1 172 2.6E-89 T 21-04-2016 VFU_RS09610 f7f5dbb2a89858af5716a2f81d8ce919 172 Gene3D G3DSA:3.10.450.50 3 172 4.2E-62 T 21-04-2016 IPR032710 NTF2-like domain VFU_RS08060 d33fdc4b62e37ed1a6ca84a1a74f6c51 144 PANTHER PTHR42641 4 131 6.5E-35 T 21-04-2016 VFU_RS08060 d33fdc4b62e37ed1a6ca84a1a74f6c51 144 Pfam PF05232 Chlorhexidine efflux transporter 71 133 9.3E-23 T 21-04-2016 IPR007896 Chlorhexidine efflux transporter VFU_RS08060 d33fdc4b62e37ed1a6ca84a1a74f6c51 144 Pfam PF05232 Chlorhexidine efflux transporter 1 65 1.0E-23 T 21-04-2016 IPR007896 Chlorhexidine efflux transporter VFU_RS08060 d33fdc4b62e37ed1a6ca84a1a74f6c51 144 PANTHER PTHR42641:SF2 4 131 6.5E-35 T 21-04-2016 VFU_RS03380 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 21-04-2016 IPR030659 SecY conserved site VFU_RS03380 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 Gene3D G3DSA:1.10.3370.10 15 438 1.8E-164 T 21-04-2016 IPR023201 SecY subunit domain VFU_RS03380 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 PANTHER PTHR10906:SF2 17 444 2.8E-230 T 21-04-2016 VFU_RS03380 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 PANTHER PTHR10906 17 444 2.8E-230 T 21-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 VFU_RS03380 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 SUPERFAMILY SSF103491 15 425 3.4E-131 T 21-04-2016 IPR023201 SecY subunit domain VFU_RS03380 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 5.9E-96 T 21-04-2016 VFU_RS03380 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 316 338 5.9E-96 T 21-04-2016 VFU_RS03380 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 371 389 5.9E-96 T 21-04-2016 VFU_RS03380 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 403 421 5.9E-96 T 21-04-2016 VFU_RS03380 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 152 177 5.9E-96 T 21-04-2016 VFU_RS03380 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 5.9E-96 T 21-04-2016 VFU_RS03380 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 5.9E-96 T 21-04-2016 VFU_RS03380 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 178 201 5.9E-96 T 21-04-2016 VFU_RS03380 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 270 289 5.9E-96 T 21-04-2016 VFU_RS03380 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 PIRSF PIRSF004557 10 442 1.9E-122 T 21-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 VFU_RS03380 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 430 8.7E-135 T 21-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 VFU_RS03380 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 Hamap MF_01465 Protein translocase subunit SecY [secY]. 9 434 29.236 T 21-04-2016 IPR026593 Protein translocase subunit SecY VFU_RS03380 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 ProSitePatterns PS00756 Protein secY signature 2. 171 188 - T 21-04-2016 IPR030659 SecY conserved site VFU_RS03380 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 Pfam PF00344 SecY translocase 76 418 9.5E-119 T 21-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 VFU_RS09825 a5b08b475ff4d4b38ac39132313b4001 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 3 109 1.6E-47 T 21-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE VFU_RS09825 a5b08b475ff4d4b38ac39132313b4001 109 PIRSF PIRSF006223 2 109 5.9E-41 T 21-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE VFU_RS09825 a5b08b475ff4d4b38ac39132313b4001 109 PANTHER PTHR37010 1 109 7.1E-56 T 21-04-2016 VFU_RS09825 a5b08b475ff4d4b38ac39132313b4001 109 PANTHER PTHR37010:SF1 1 109 7.1E-56 T 21-04-2016 VFU_RS09825 a5b08b475ff4d4b38ac39132313b4001 109 Gene3D G3DSA:3.30.1420.10 1 39 5.8E-13 T 21-04-2016 VFU_RS09825 a5b08b475ff4d4b38ac39132313b4001 109 Pfam PF04358 DsrC like protein 3 109 1.1E-42 T 21-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE VFU_RS09825 a5b08b475ff4d4b38ac39132313b4001 109 Gene3D G3DSA:1.10.10.370 40 109 8.7E-36 T 21-04-2016 VFU_RS09825 a5b08b475ff4d4b38ac39132313b4001 109 SUPERFAMILY SSF69721 2 109 1.96E-39 T 21-04-2016 IPR025526 DsrC-like domain VFU_RS11675 bac2e5e3b59924bbc9ca04282e2b1eae 663 PANTHER PTHR32089:SF58 1 663 1.7E-257 T 21-04-2016 VFU_RS11675 bac2e5e3b59924bbc9ca04282e2b1eae 663 Gene3D G3DSA:1.10.287.950 416 631 4.3E-55 T 21-04-2016 VFU_RS11675 bac2e5e3b59924bbc9ca04282e2b1eae 663 SUPERFAMILY SSF58104 354 663 1.31E-73 T 21-04-2016 VFU_RS11675 bac2e5e3b59924bbc9ca04282e2b1eae 663 Pfam PF00672 HAMP domain 315 383 8.8E-10 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS11675 bac2e5e3b59924bbc9ca04282e2b1eae 663 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 422 451 8.6E-22 T 21-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VFU_RS11675 bac2e5e3b59924bbc9ca04282e2b1eae 663 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 499 526 8.6E-22 T 21-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VFU_RS11675 bac2e5e3b59924bbc9ca04282e2b1eae 663 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 528 557 8.6E-22 T 21-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VFU_RS11675 bac2e5e3b59924bbc9ca04282e2b1eae 663 SMART SM00283 401 662 6.4E-74 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VFU_RS11675 bac2e5e3b59924bbc9ca04282e2b1eae 663 SMART SM00304 334 386 9.5E-6 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS11675 bac2e5e3b59924bbc9ca04282e2b1eae 663 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 461 661 1.2E-50 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VFU_RS11675 bac2e5e3b59924bbc9ca04282e2b1eae 663 PANTHER PTHR32089 1 663 1.7E-257 T 21-04-2016 VFU_RS03180 ffbf6ef7d6ac4b98b892be23777e875f 403 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 16 399 3.1E-148 T 21-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 VFU_RS03180 ffbf6ef7d6ac4b98b892be23777e875f 403 PANTHER PTHR11986:SF71 12 403 5.8E-200 T 21-04-2016 VFU_RS03180 ffbf6ef7d6ac4b98b892be23777e875f 403 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 7 403 2.4E-206 T 21-04-2016 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 VFU_RS03180 ffbf6ef7d6ac4b98b892be23777e875f 403 SUPERFAMILY SSF53383 16 399 4.57E-130 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VFU_RS03180 ffbf6ef7d6ac4b98b892be23777e875f 403 PANTHER PTHR11986 12 403 5.8E-200 T 21-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VFU_RS03180 ffbf6ef7d6ac4b98b892be23777e875f 403 Gene3D G3DSA:3.40.640.10 60 303 1.5E-90 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VFU_RS03180 ffbf6ef7d6ac4b98b892be23777e875f 403 Gene3D G3DSA:3.90.1150.10 306 400 3.1E-37 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VFU_RS03180 ffbf6ef7d6ac4b98b892be23777e875f 403 Gene3D G3DSA:3.90.1150.10 14 59 3.1E-37 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VFU_RS03180 ffbf6ef7d6ac4b98b892be23777e875f 403 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 13 400 45.484 T 21-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 VFU_RS03180 ffbf6ef7d6ac4b98b892be23777e875f 403 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 222 259 - T 21-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VFU_RS03180 ffbf6ef7d6ac4b98b892be23777e875f 403 Pfam PF00202 Aminotransferase class-III 22 399 3.7E-126 T 21-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VFU_RS13435 07cb72439624ca9a7a11d0b21aacf90a 395 Gene3D G3DSA:1.10.443.10 202 382 1.8E-30 T 21-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VFU_RS13435 07cb72439624ca9a7a11d0b21aacf90a 395 PANTHER PTHR30629:SF2 2 392 7.3E-87 T 21-04-2016 VFU_RS13435 07cb72439624ca9a7a11d0b21aacf90a 395 Pfam PF13356 Domain of unknown function (DUF4102) 2 88 4.3E-16 T 21-04-2016 IPR025166 Domain of unknown function DUF4102 VFU_RS13435 07cb72439624ca9a7a11d0b21aacf90a 395 PANTHER PTHR30629 2 392 7.3E-87 T 21-04-2016 VFU_RS13435 07cb72439624ca9a7a11d0b21aacf90a 395 SUPERFAMILY SSF56349 98 384 1.95E-60 T 21-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VFU_RS13435 07cb72439624ca9a7a11d0b21aacf90a 395 Gene3D G3DSA:1.10.150.130 98 193 4.7E-20 T 21-04-2016 IPR023109 Integrase/recombinase, N-terminal VFU_RS13435 07cb72439624ca9a7a11d0b21aacf90a 395 Pfam PF00589 Phage integrase family 204 374 5.2E-23 T 21-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VFU_RS07455 c60f7cc0500d0776c8efdc3d686fab62 409 SUPERFAMILY SSF53901 216 406 1.12E-60 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VFU_RS07455 c60f7cc0500d0776c8efdc3d686fab62 409 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 247 5.4E-40 T 21-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal VFU_RS07455 c60f7cc0500d0776c8efdc3d686fab62 409 SMART SM00825 Beta-ketoacyl synthase 5 409 1.6E-10 T 21-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VFU_RS07455 c60f7cc0500d0776c8efdc3d686fab62 409 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 156 172 - T 21-04-2016 IPR018201 Beta-ketoacyl synthase, active site VFU_RS07455 c60f7cc0500d0776c8efdc3d686fab62 409 Gene3D G3DSA:3.40.47.10 2 260 2.1E-55 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VFU_RS07455 c60f7cc0500d0776c8efdc3d686fab62 409 PANTHER PTHR11712 3 406 9.2E-114 T 21-04-2016 VFU_RS07455 c60f7cc0500d0776c8efdc3d686fab62 409 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 363 1.6E-28 T 21-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal VFU_RS07455 c60f7cc0500d0776c8efdc3d686fab62 409 SUPERFAMILY SSF53901 3 252 5.5E-54 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VFU_RS07455 c60f7cc0500d0776c8efdc3d686fab62 409 Gene3D G3DSA:3.40.47.10 264 407 2.9E-48 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VFU_RS01100 8f4e55eea2798a3228b9b7c2c8136044 225 Pfam PF11726 Protein of unknown function (DUF3296) 38 223 2.3E-64 T 21-04-2016 IPR021723 Inovirus Gp2 VFU_RS10520 2498a9703d4b7838bfb2211a2f667934 334 Gene3D G3DSA:3.40.800.10 8 331 1.8E-111 T 21-04-2016 IPR023696 Ureohydrolase domain VFU_RS10520 2498a9703d4b7838bfb2211a2f667934 334 ProSitePatterns PS01053 Arginase family signature. 254 275 - T 21-04-2016 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Reactome: REACT_13 VFU_RS10520 2498a9703d4b7838bfb2211a2f667934 334 Hamap MF_00737 Formimidoylglutamase [hutG]. 8 326 43.038 T 21-04-2016 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8|UniPathway: UPA00379 VFU_RS10520 2498a9703d4b7838bfb2211a2f667934 334 TIGRFAM TIGR01227 hutG: formimidoylglutamase 13 326 1.1E-117 T 21-04-2016 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8|UniPathway: UPA00379 VFU_RS10520 2498a9703d4b7838bfb2211a2f667934 334 PRINTS PR00116 Arginase signature 251 280 7.7E-5 T 21-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 VFU_RS10520 2498a9703d4b7838bfb2211a2f667934 334 PRINTS PR00116 Arginase signature 125 140 7.7E-5 T 21-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 VFU_RS10520 2498a9703d4b7838bfb2211a2f667934 334 SUPERFAMILY SSF52768 13 330 5.76E-84 T 21-04-2016 VFU_RS10520 2498a9703d4b7838bfb2211a2f667934 334 Pfam PF00491 Arginase family 46 324 1.4E-61 T 21-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 VFU_RS10520 2498a9703d4b7838bfb2211a2f667934 334 PANTHER PTHR11358 7 330 1.1E-132 T 21-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 VFU_RS10520 2498a9703d4b7838bfb2211a2f667934 334 PANTHER PTHR11358:SF35 7 330 1.1E-132 T 21-04-2016 VFU_RS05410 33756ff561434bc3b0c4c2622719de58 346 SUPERFAMILY SSF56042 172 342 6.28E-62 T 21-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VFU_RS05410 33756ff561434bc3b0c4c2622719de58 346 Gene3D G3DSA:3.90.650.10 172 344 1.1E-67 T 21-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VFU_RS05410 33756ff561434bc3b0c4c2622719de58 346 Pfam PF00586 AIR synthase related protein, N-terminal domain 59 165 1.0E-15 T 21-04-2016 IPR016188 PurM-like, N-terminal domain VFU_RS05410 33756ff561434bc3b0c4c2622719de58 346 Gene3D G3DSA:3.30.1330.10 23 171 3.8E-65 T 21-04-2016 IPR016188 PurM-like, N-terminal domain VFU_RS05410 33756ff561434bc3b0c4c2622719de58 346 SUPERFAMILY SSF55326 8 171 2.84E-54 T 21-04-2016 VFU_RS05410 33756ff561434bc3b0c4c2622719de58 346 Pfam PF02769 AIR synthase related protein, C-terminal domain 178 341 8.6E-39 T 21-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VFU_RS05410 33756ff561434bc3b0c4c2622719de58 346 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 345 47.352 T 21-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VFU_RS05410 33756ff561434bc3b0c4c2622719de58 346 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 8 334 3.3E-150 T 21-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VFU_RS05410 33756ff561434bc3b0c4c2622719de58 346 PANTHER PTHR10520 8 334 1.9E-223 T 21-04-2016 VFU_RS11395 7f50f13b51441f90eb262e94c8f3ceb1 227 TIGRFAM TIGR02796 tolQ: protein TolQ 6 220 1.2E-92 T 21-04-2016 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 VFU_RS11395 7f50f13b51441f90eb262e94c8f3ceb1 227 PANTHER PTHR30625 3 223 2.7E-76 T 21-04-2016 VFU_RS11395 7f50f13b51441f90eb262e94c8f3ceb1 227 Pfam PF01618 MotA/TolQ/ExbB proton channel family 80 205 1.9E-42 T 21-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 VFU_RS11395 7f50f13b51441f90eb262e94c8f3ceb1 227 PANTHER PTHR30625:SF3 3 223 2.7E-76 T 21-04-2016 VFU_RS03840 9af1bd5715e4e24db2185f6de81db7f6 378 Gene3D G3DSA:1.10.150.130 113 182 3.2E-10 T 21-04-2016 IPR023109 Integrase/recombinase, N-terminal VFU_RS03840 9af1bd5715e4e24db2185f6de81db7f6 378 Gene3D G3DSA:1.10.443.10 188 367 1.3E-28 T 21-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VFU_RS03840 9af1bd5715e4e24db2185f6de81db7f6 378 PANTHER PTHR30349:SF20 86 365 3.7E-31 T 21-04-2016 VFU_RS03840 9af1bd5715e4e24db2185f6de81db7f6 378 PANTHER PTHR30349 86 365 3.7E-31 T 21-04-2016 VFU_RS03840 9af1bd5715e4e24db2185f6de81db7f6 378 SUPERFAMILY SSF56349 89 363 6.87E-49 T 21-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VFU_RS03840 9af1bd5715e4e24db2185f6de81db7f6 378 Pfam PF00589 Phage integrase family 191 353 3.3E-22 T 21-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VFU_RS03465 9163b5e1e8fc1ea1392b9c98cce91162 476 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 27 433 3.4E-200 T 21-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 VFU_RS03465 9163b5e1e8fc1ea1392b9c98cce91162 476 Gene3D G3DSA:3.40.50.300 19 234 1.0E-68 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS03465 9163b5e1e8fc1ea1392b9c98cce91162 476 Pfam PF00009 Elongation factor Tu GTP binding domain 26 230 6.7E-44 T 21-04-2016 VFU_RS03465 9163b5e1e8fc1ea1392b9c98cce91162 476 SUPERFAMILY SSF50447 242 327 4.57E-24 T 21-04-2016 IPR009000 Translation protein, beta-barrel domain VFU_RS03465 9163b5e1e8fc1ea1392b9c98cce91162 476 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 18 474 54.268 T 21-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 VFU_RS03465 9163b5e1e8fc1ea1392b9c98cce91162 476 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 82 97 - T 21-04-2016 IPR031157 Tr-type G domain, conserved site VFU_RS03465 9163b5e1e8fc1ea1392b9c98cce91162 476 SUPERFAMILY SSF50465 332 434 3.5E-29 T 21-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VFU_RS03465 9163b5e1e8fc1ea1392b9c98cce91162 476 PRINTS PR00315 GTP-binding elongation factor signature 89 97 6.8E-13 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VFU_RS03465 9163b5e1e8fc1ea1392b9c98cce91162 476 PRINTS PR00315 GTP-binding elongation factor signature 125 136 6.8E-13 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VFU_RS03465 9163b5e1e8fc1ea1392b9c98cce91162 476 PRINTS PR00315 GTP-binding elongation factor signature 109 119 6.8E-13 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VFU_RS03465 9163b5e1e8fc1ea1392b9c98cce91162 476 PRINTS PR00315 GTP-binding elongation factor signature 28 41 6.8E-13 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VFU_RS03465 9163b5e1e8fc1ea1392b9c98cce91162 476 PRINTS PR00315 GTP-binding elongation factor signature 162 171 6.8E-13 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VFU_RS03465 9163b5e1e8fc1ea1392b9c98cce91162 476 Gene3D G3DSA:2.40.30.10 243 358 5.5E-20 T 21-04-2016 VFU_RS03465 9163b5e1e8fc1ea1392b9c98cce91162 476 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 33 211 3.3E-12 T 21-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VFU_RS03465 9163b5e1e8fc1ea1392b9c98cce91162 476 SUPERFAMILY SSF52540 22 229 4.0E-58 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS03465 9163b5e1e8fc1ea1392b9c98cce91162 476 PANTHER PTHR23115 74 359 2.1E-69 T 21-04-2016 VFU_RS03465 9163b5e1e8fc1ea1392b9c98cce91162 476 PANTHER PTHR23115 31 53 2.1E-69 T 21-04-2016 VFU_RS13145 465a0aa9d00c99906b1de3753307c562 231 Gene3D G3DSA:2.40.30.70 3 154 2.5E-48 T 21-04-2016 IPR023370 TsaA-like domain VFU_RS13145 465a0aa9d00c99906b1de3753307c562 231 Pfam PF01980 Uncharacterised protein family UPF0066 19 141 1.1E-38 T 21-04-2016 IPR023370 TsaA-like domain VFU_RS13145 465a0aa9d00c99906b1de3753307c562 231 PANTHER PTHR12818 1 229 1.0E-116 T 21-04-2016 VFU_RS13145 465a0aa9d00c99906b1de3753307c562 231 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 3 147 1.8E-46 T 21-04-2016 IPR023370 TsaA-like domain VFU_RS13145 465a0aa9d00c99906b1de3753307c562 231 SUPERFAMILY SSF118196 2 226 1.12E-75 T 21-04-2016 IPR023370 TsaA-like domain VFU_RS13145 465a0aa9d00c99906b1de3753307c562 231 PANTHER PTHR12818:SF6 1 229 1.0E-116 T 21-04-2016 VFU_RS08560 69b345b53082a6c98404426e48f36d4f 517 Pfam PF01471 Putative peptidoglycan binding domain 209 263 1.4E-8 T 21-04-2016 IPR002477 Peptidoglycan binding-like VFU_RS08560 69b345b53082a6c98404426e48f36d4f 517 PANTHER PTHR41533 11 512 8.2E-130 T 21-04-2016 VFU_RS08560 69b345b53082a6c98404426e48f36d4f 517 PANTHER PTHR41533:SF1 11 512 8.2E-130 T 21-04-2016 VFU_RS08560 69b345b53082a6c98404426e48f36d4f 517 Pfam PF03734 L,D-transpeptidase catalytic domain 290 458 8.5E-29 T 21-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 VFU_RS08560 69b345b53082a6c98404426e48f36d4f 517 Gene3D G3DSA:2.40.440.10 285 334 7.5E-12 T 21-04-2016 VFU_RS08560 69b345b53082a6c98404426e48f36d4f 517 Gene3D G3DSA:2.40.440.10 401 450 7.5E-12 T 21-04-2016 VFU_RS08560 69b345b53082a6c98404426e48f36d4f 517 SUPERFAMILY SSF47090 195 270 2.82E-12 T 21-04-2016 IPR002477 Peptidoglycan binding-like VFU_RS08560 69b345b53082a6c98404426e48f36d4f 517 Gene3D G3DSA:1.10.101.10 198 270 5.1E-12 T 21-04-2016 IPR002477 Peptidoglycan binding-like VFU_RS08560 69b345b53082a6c98404426e48f36d4f 517 SUPERFAMILY SSF141523 287 343 1.7E-18 T 21-04-2016 VFU_RS08560 69b345b53082a6c98404426e48f36d4f 517 SUPERFAMILY SSF141523 399 450 1.7E-18 T 21-04-2016 VFU_RS15025 a1d82f35fd7d9d426674f6878d9c7d54 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 21-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS15025 a1d82f35fd7d9d426674f6878d9c7d54 85 Gene3D G3DSA:2.40.50.100 20 82 1.6E-32 T 21-04-2016 VFU_RS15025 a1d82f35fd7d9d426674f6878d9c7d54 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 2.0E-18 T 21-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS15025 a1d82f35fd7d9d426674f6878d9c7d54 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.582 T 21-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS15025 a1d82f35fd7d9d426674f6878d9c7d54 85 Pfam PF01016 Ribosomal L27 protein 2 82 1.1E-39 T 21-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS15025 a1d82f35fd7d9d426674f6878d9c7d54 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.3E-39 T 21-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS15025 a1d82f35fd7d9d426674f6878d9c7d54 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.3E-39 T 21-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS15025 a1d82f35fd7d9d426674f6878d9c7d54 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.3E-39 T 21-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS15025 a1d82f35fd7d9d426674f6878d9c7d54 85 PANTHER PTHR15893 1 85 3.2E-53 T 21-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS15025 a1d82f35fd7d9d426674f6878d9c7d54 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 7.1E-44 T 21-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS15025 a1d82f35fd7d9d426674f6878d9c7d54 85 SUPERFAMILY SSF110324 2 80 8.72E-35 T 21-04-2016 VFU_RS14175 6e86c30be129d35d371bec309ed2eacf 1076 Gene3D G3DSA:3.40.50.1380 939 1071 1.7E-38 T 21-04-2016 IPR011607 Methylglyoxal synthase-like domain VFU_RS14175 6e86c30be129d35d371bec309ed2eacf 1076 SMART SM00851 955 1041 8.0E-26 T 21-04-2016 IPR011607 Methylglyoxal synthase-like domain VFU_RS14175 6e86c30be129d35d371bec309ed2eacf 1076 PANTHER PTHR11405 1 1072 0.0 T 21-04-2016 VFU_RS14175 6e86c30be129d35d371bec309ed2eacf 1076 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 21-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VFU_RS14175 6e86c30be129d35d371bec309ed2eacf 1076 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 21-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VFU_RS14175 6e86c30be129d35d371bec309ed2eacf 1076 SUPERFAMILY SSF48108 396 554 2.09E-52 T 21-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VFU_RS14175 6e86c30be129d35d371bec309ed2eacf 1076 SUPERFAMILY SSF56059 673 932 4.6E-104 T 21-04-2016 VFU_RS14175 6e86c30be129d35d371bec309ed2eacf 1076 Gene3D G3DSA:3.30.470.20 745 932 2.4E-82 T 21-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VFU_RS14175 6e86c30be129d35d371bec309ed2eacf 1076 Gene3D G3DSA:3.30.470.20 200 399 4.0E-74 T 21-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VFU_RS14175 6e86c30be129d35d371bec309ed2eacf 1076 Pfam PF02142 MGS-like domain 956 1041 6.3E-16 T 21-04-2016 IPR011607 Methylglyoxal synthase-like domain VFU_RS14175 6e86c30be129d35d371bec309ed2eacf 1076 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.386 T 21-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VFU_RS14175 6e86c30be129d35d371bec309ed2eacf 1076 Gene3D G3DSA:3.40.50.20 539 662 6.0E-61 T 21-04-2016 IPR016185 Pre-ATP-grasp domain VFU_RS14175 6e86c30be129d35d371bec309ed2eacf 1076 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 21-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VFU_RS14175 6e86c30be129d35d371bec309ed2eacf 1076 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 21-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VFU_RS14175 6e86c30be129d35d371bec309ed2eacf 1076 PANTHER PTHR11405:SF5 1 1072 0.0 T 21-04-2016 VFU_RS14175 6e86c30be129d35d371bec309ed2eacf 1076 Gene3D G3DSA:3.30.1490.20 688 744 5.9E-25 T 21-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VFU_RS14175 6e86c30be129d35d371bec309ed2eacf 1076 Gene3D G3DSA:1.10.1030.10 400 538 2.0E-51 T 21-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VFU_RS14175 6e86c30be129d35d371bec309ed2eacf 1076 SUPERFAMILY SSF56059 128 401 3.01E-108 T 21-04-2016 VFU_RS14175 6e86c30be129d35d371bec309ed2eacf 1076 SMART SM01096 424 547 1.2E-75 T 21-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VFU_RS14175 6e86c30be129d35d371bec309ed2eacf 1076 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.101 T 21-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VFU_RS14175 6e86c30be129d35d371bec309ed2eacf 1076 SUPERFAMILY SSF52335 936 1071 1.31E-34 T 21-04-2016 IPR011607 Methylglyoxal synthase-like domain VFU_RS14175 6e86c30be129d35d371bec309ed2eacf 1076 Gene3D G3DSA:3.40.50.20 3 108 3.4E-46 T 21-04-2016 IPR016185 Pre-ATP-grasp domain VFU_RS14175 6e86c30be129d35d371bec309ed2eacf 1076 SUPERFAMILY SSF52440 1 127 3.45E-50 T 21-04-2016 IPR016185 Pre-ATP-grasp domain VFU_RS14175 6e86c30be129d35d371bec309ed2eacf 1076 SUPERFAMILY SSF52440 556 675 1.22E-49 T 21-04-2016 IPR016185 Pre-ATP-grasp domain VFU_RS14175 6e86c30be129d35d371bec309ed2eacf 1076 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 1.4E-40 T 21-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VFU_RS14175 6e86c30be129d35d371bec309ed2eacf 1076 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 875 6.9E-38 T 21-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VFU_RS14175 6e86c30be129d35d371bec309ed2eacf 1076 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 6.2E-72 T 21-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VFU_RS14175 6e86c30be129d35d371bec309ed2eacf 1076 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1050 0.0 T 21-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VFU_RS14175 6e86c30be129d35d371bec309ed2eacf 1076 Gene3D G3DSA:3.30.1490.20 142 199 7.2E-25 T 21-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VFU_RS14175 6e86c30be129d35d371bec309ed2eacf 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.6E-64 T 21-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VFU_RS14175 6e86c30be129d35d371bec309ed2eacf 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.6E-64 T 21-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VFU_RS14175 6e86c30be129d35d371bec309ed2eacf 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 1.6E-64 T 21-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VFU_RS14175 6e86c30be129d35d371bec309ed2eacf 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.6E-64 T 21-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VFU_RS14175 6e86c30be129d35d371bec309ed2eacf 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.6E-64 T 21-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VFU_RS14175 6e86c30be129d35d371bec309ed2eacf 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 1.6E-64 T 21-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VFU_RS14175 6e86c30be129d35d371bec309ed2eacf 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.6E-64 T 21-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VFU_RS03065 620fa0007b2873a4f84ba269a26e6940 334 SUPERFAMILY SSF51735 1 171 2.24E-40 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS03065 620fa0007b2873a4f84ba269a26e6940 334 SMART SM00859 3 146 7.3E-43 T 21-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VFU_RS03065 620fa0007b2873a4f84ba269a26e6940 334 Gene3D G3DSA:3.40.50.720 1 162 7.2E-54 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS03065 620fa0007b2873a4f84ba269a26e6940 334 Gene3D G3DSA:3.30.360.10 163 308 7.4E-51 T 21-04-2016 VFU_RS03065 620fa0007b2873a4f84ba269a26e6940 334 PANTHER PTHR32338 1 333 7.9E-150 T 21-04-2016 VFU_RS03065 620fa0007b2873a4f84ba269a26e6940 334 SUPERFAMILY SSF55347 154 308 8.29E-50 T 21-04-2016 VFU_RS03065 620fa0007b2873a4f84ba269a26e6940 334 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 144 2.9E-30 T 21-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VFU_RS03065 620fa0007b2873a4f84ba269a26e6940 334 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 36.651 T 21-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VFU_RS03065 620fa0007b2873a4f84ba269a26e6940 334 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 21-04-2016 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VFU_RS03065 620fa0007b2873a4f84ba269a26e6940 334 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 333 5.0E-119 T 21-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VFU_RS03065 620fa0007b2873a4f84ba269a26e6940 334 PANTHER PTHR32338:SF8 1 333 7.9E-150 T 21-04-2016 VFU_RS03065 620fa0007b2873a4f84ba269a26e6940 334 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 164 311 3.0E-14 T 21-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VFU_RS12915 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 PANTHER PTHR32063 1 1010 0.0 T 21-04-2016 VFU_RS12915 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 Gene3D G3DSA:3.30.2090.10 703 788 9.7E-21 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VFU_RS12915 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 SUPERFAMILY SSF82866 290 489 4.19E-46 T 21-04-2016 VFU_RS12915 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 Gene3D G3DSA:3.30.70.1430 556 653 1.9E-13 T 21-04-2016 VFU_RS12915 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 7.7E-70 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS12915 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 7.7E-70 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS12915 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 7.7E-70 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS12915 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 7.7E-70 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS12915 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 7.7E-70 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS12915 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 611 625 7.7E-70 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS12915 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 7.7E-70 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS12915 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 7.7E-70 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS12915 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 7.7E-70 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS12915 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 PANTHER PTHR32063:SF29 1 1010 0.0 T 21-04-2016 VFU_RS12915 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 Gene3D G3DSA:3.30.2090.10 183 268 2.7E-16 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VFU_RS12915 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 Gene3D G3DSA:1.20.1640.10 286 499 1.7E-57 T 21-04-2016 VFU_RS12915 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 SUPERFAMILY SSF82693 40 134 2.01E-25 T 21-04-2016 VFU_RS12915 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 SUPERFAMILY SSF82693 554 657 1.44E-15 T 21-04-2016 VFU_RS12915 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 SUPERFAMILY SSF82714 704 788 1.31E-18 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VFU_RS12915 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 8.4E-277 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS12915 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 SUPERFAMILY SSF82714 183 266 2.75E-14 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VFU_RS12915 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 SUPERFAMILY SSF82866 794 1010 1.01E-47 T 21-04-2016 VFU_RS12915 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 Gene3D G3DSA:1.10.3850.10 796 1010 7.5E-64 T 21-04-2016 VFU_RS12915 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 Gene3D G3DSA:3.30.70.1430 40 140 5.3E-29 T 21-04-2016 VFU_RS12915 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 SUPERFAMILY SSF82693 139 181 1.92E-19 T 21-04-2016 VFU_RS12915 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 SUPERFAMILY SSF82693 268 324 1.92E-19 T 21-04-2016 VFU_RS00385 a0e2392f764faec847f03832246c3783 607 PANTHER PTHR11911:SF68 147 355 4.0E-29 T 21-04-2016 VFU_RS00385 a0e2392f764faec847f03832246c3783 607 PANTHER PTHR11911 147 355 4.0E-29 T 21-04-2016 VFU_RS00385 a0e2392f764faec847f03832246c3783 607 Pfam PF03445 Putative nucleotidyltransferase DUF294 302 431 9.2E-41 T 21-04-2016 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 VFU_RS00385 a0e2392f764faec847f03832246c3783 607 Gene3D G3DSA:3.10.580.10 156 276 4.1E-15 T 21-04-2016 VFU_RS00385 a0e2392f764faec847f03832246c3783 607 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 470 603 6.9E-38 T 21-04-2016 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding VFU_RS00385 a0e2392f764faec847f03832246c3783 607 Gene3D G3DSA:2.60.120.10 8 127 1.4E-13 T 21-04-2016 IPR014710 RmlC-like jelly roll fold VFU_RS00385 a0e2392f764faec847f03832246c3783 607 SUPERFAMILY SSF51206 8 129 1.96E-17 T 21-04-2016 IPR018490 Cyclic nucleotide-binding-like VFU_RS00385 a0e2392f764faec847f03832246c3783 607 SUPERFAMILY SSF54631 146 275 4.76E-16 T 21-04-2016 VFU_RS00385 a0e2392f764faec847f03832246c3783 607 SMART SM00100 11 128 1.1E-4 T 21-04-2016 IPR000595 Cyclic nucleotide-binding domain VFU_RS00385 a0e2392f764faec847f03832246c3783 607 Pfam PF00027 Cyclic nucleotide-binding domain 31 112 2.1E-11 T 21-04-2016 IPR000595 Cyclic nucleotide-binding domain VFU_RS13065 9a87a7762bbfdfe9a9b9dc2b5d20b473 482 SUPERFAMILY SSF143437 1 173 2.09E-45 T 21-04-2016 VFU_RS13065 9a87a7762bbfdfe9a9b9dc2b5d20b473 482 PANTHER PTHR14911:SF15 3 417 6.5E-255 T 21-04-2016 VFU_RS13065 9a87a7762bbfdfe9a9b9dc2b5d20b473 482 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 375 5.0E-109 T 21-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 VFU_RS13065 9a87a7762bbfdfe9a9b9dc2b5d20b473 482 SUPERFAMILY SSF52402 174 372 1.85E-42 T 21-04-2016 VFU_RS13065 9a87a7762bbfdfe9a9b9dc2b5d20b473 482 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 382 482 3.7E-42 T 21-04-2016 IPR026340 Thiazole biosynthesis domain GO:0052837 UniPathway: UPA00060 VFU_RS13065 9a87a7762bbfdfe9a9b9dc2b5d20b473 482 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 3.7E-71 T 21-04-2016 IPR020536 Thil, AANH domain GO:0004810 UniPathway: UPA00060 VFU_RS13065 9a87a7762bbfdfe9a9b9dc2b5d20b473 482 Gene3D G3DSA:3.40.50.620 173 333 1.2E-34 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VFU_RS13065 9a87a7762bbfdfe9a9b9dc2b5d20b473 482 PANTHER PTHR14911 3 417 6.5E-255 T 21-04-2016 VFU_RS13065 9a87a7762bbfdfe9a9b9dc2b5d20b473 482 SMART SM00981 75 165 8.3E-23 T 21-04-2016 IPR004114 THUMP domain GO:0003723 VFU_RS13065 9a87a7762bbfdfe9a9b9dc2b5d20b473 482 SUPERFAMILY SSF52821 399 481 4.71E-12 T 21-04-2016 IPR001763 Rhodanese-like domain VFU_RS13065 9a87a7762bbfdfe9a9b9dc2b5d20b473 482 Gene3D G3DSA:3.40.250.10 399 480 1.4E-10 T 21-04-2016 IPR001763 Rhodanese-like domain VFU_RS13065 9a87a7762bbfdfe9a9b9dc2b5d20b473 482 Pfam PF02926 THUMP domain 43 156 2.8E-22 T 21-04-2016 IPR004114 THUMP domain GO:0003723 VFU_RS13065 9a87a7762bbfdfe9a9b9dc2b5d20b473 482 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 482 219.139 T 21-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 VFU_RS09660 34fd184609ae11cad560151e1e6022c3 540 Gene3D G3DSA:3.50.50.60 2 174 1.4E-52 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS09660 34fd184609ae11cad560151e1e6022c3 540 Gene3D G3DSA:3.50.50.60 257 338 1.4E-52 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS09660 34fd184609ae11cad560151e1e6022c3 540 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 148 163 6.7E-25 T 21-04-2016 VFU_RS09660 34fd184609ae11cad560151e1e6022c3 540 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 269 284 6.7E-25 T 21-04-2016 VFU_RS09660 34fd184609ae11cad560151e1e6022c3 540 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 302 320 6.7E-25 T 21-04-2016 VFU_RS09660 34fd184609ae11cad560151e1e6022c3 540 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 284 300 6.7E-25 T 21-04-2016 VFU_RS09660 34fd184609ae11cad560151e1e6022c3 540 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 320 336 6.7E-25 T 21-04-2016 VFU_RS09660 34fd184609ae11cad560151e1e6022c3 540 Pfam PF01494 FAD binding domain 1 334 2.0E-77 T 21-04-2016 IPR002938 FAD-binding domain GO:0071949 VFU_RS09660 34fd184609ae11cad560151e1e6022c3 540 PANTHER PTHR13789 1 412 5.4E-127 T 21-04-2016 VFU_RS09660 34fd184609ae11cad560151e1e6022c3 540 PANTHER PTHR13789:SF210 1 412 5.4E-127 T 21-04-2016 VFU_RS09660 34fd184609ae11cad560151e1e6022c3 540 SUPERFAMILY SSF51905 256 370 2.5E-65 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS09660 34fd184609ae11cad560151e1e6022c3 540 SUPERFAMILY SSF51905 2 169 2.5E-65 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS05920 de80b75f89999fef9486399489409c81 468 SMART SM00382 149 293 1.0E-7 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS05920 de80b75f89999fef9486399489409c81 468 Gene3D G3DSA:3.40.50.2300 3 120 3.0E-35 T 21-04-2016 VFU_RS05920 de80b75f89999fef9486399489409c81 468 SMART SM00448 4 115 7.8E-33 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS05920 de80b75f89999fef9486399489409c81 468 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 342 351 - T 21-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VFU_RS05920 de80b75f89999fef9486399489409c81 468 SUPERFAMILY SSF46689 342 459 4.48E-9 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS05920 de80b75f89999fef9486399489409c81 468 Pfam PF00158 Sigma-54 interaction domain 132 295 2.0E-65 T 21-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VFU_RS05920 de80b75f89999fef9486399489409c81 468 Gene3D G3DSA:3.40.50.300 130 300 7.0E-52 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS05920 de80b75f89999fef9486399489409c81 468 Pfam PF00072 Response regulator receiver domain 6 115 6.0E-27 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS05920 de80b75f89999fef9486399489409c81 468 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 215 230 - T 21-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VFU_RS05920 de80b75f89999fef9486399489409c81 468 Gene3D G3DSA:1.10.10.60 415 458 7.8E-12 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS05920 de80b75f89999fef9486399489409c81 468 PANTHER PTHR32071:SF21 1 467 7.9E-267 T 21-04-2016 IPR029995 Transcriptional regulatory protein FlbD GO:0003700|GO:0006355 VFU_RS05920 de80b75f89999fef9486399489409c81 468 Gene3D G3DSA:1.10.8.60 302 371 6.6E-26 T 21-04-2016 VFU_RS05920 de80b75f89999fef9486399489409c81 468 SUPERFAMILY SSF52172 3 173 1.85E-39 T 21-04-2016 IPR011006 CheY-like superfamily VFU_RS05920 de80b75f89999fef9486399489409c81 468 PANTHER PTHR32071 1 467 7.9E-267 T 21-04-2016 VFU_RS05920 de80b75f89999fef9486399489409c81 468 Pfam PF02954 Bacterial regulatory protein, Fis family 419 458 9.1E-13 T 21-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VFU_RS05920 de80b75f89999fef9486399489409c81 468 SUPERFAMILY SSF52540 133 370 1.27E-70 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS03680 cd0580b3cf8c6980d939a0258cb045d9 421 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 46.031 T 21-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VFU_RS03680 cd0580b3cf8c6980d939a0258cb045d9 421 Gene3D G3DSA:3.65.10.10 22 220 1.1E-69 T 21-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 VFU_RS03680 cd0580b3cf8c6980d939a0258cb045d9 421 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 11 407 1.3E-121 T 21-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 VFU_RS03680 cd0580b3cf8c6980d939a0258cb045d9 421 Gene3D G3DSA:3.65.10.10 221 417 8.3E-57 T 21-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 VFU_RS03680 cd0580b3cf8c6980d939a0258cb045d9 421 SUPERFAMILY SSF55205 3 418 5.07E-142 T 21-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 VFU_RS03680 cd0580b3cf8c6980d939a0258cb045d9 421 PANTHER PTHR21090 1 419 3.7E-211 T 21-04-2016 VFU_RS03680 cd0580b3cf8c6980d939a0258cb045d9 421 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 416 1.7E-183 T 21-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VFU_RS12790 4523206d4d8807325c60ea785bbb8f9e 85 Gene3D G3DSA:3.30.1340.10 1 83 2.3E-31 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like VFU_RS12790 4523206d4d8807325c60ea785bbb8f9e 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 1.7E-27 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like VFU_RS12790 4523206d4d8807325c60ea785bbb8f9e 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 21-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site VFU_RS12790 4523206d4d8807325c60ea785bbb8f9e 85 PANTHER PTHR33705:SF1 1 84 2.8E-36 T 21-04-2016 VFU_RS12790 4523206d4d8807325c60ea785bbb8f9e 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 5.2E-26 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like VFU_RS12790 4523206d4d8807325c60ea785bbb8f9e 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 21-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VFU_RS12790 4523206d4d8807325c60ea785bbb8f9e 85 SUPERFAMILY SSF55594 1 82 4.71E-26 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like VFU_RS12790 4523206d4d8807325c60ea785bbb8f9e 85 PANTHER PTHR33705 1 84 2.8E-36 T 21-04-2016 VFU_RS12790 4523206d4d8807325c60ea785bbb8f9e 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.6E-18 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like VFU_RS12790 4523206d4d8807325c60ea785bbb8f9e 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.6E-18 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like VFU_RS12790 4523206d4d8807325c60ea785bbb8f9e 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.6E-18 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like VFU_RS01780 091b88de333a4bca5b7326939913e0f4 156 SUPERFAMILY SSF81573 63 121 3.4E-14 T 21-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain VFU_RS01780 091b88de333a4bca5b7326939913e0f4 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 156 13.11 T 21-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 VFU_RS01780 091b88de333a4bca5b7326939913e0f4 156 Gene3D G3DSA:1.20.5.620 63 122 5.4E-23 T 21-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain VFU_RS01780 091b88de333a4bca5b7326939913e0f4 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 2.3E-34 T 21-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 VFU_RS01780 091b88de333a4bca5b7326939913e0f4 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 1.4E-59 T 21-04-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 VFU_RS01780 091b88de333a4bca5b7326939913e0f4 156 PANTHER PTHR33445 1 156 6.6E-47 T 21-04-2016 VFU_RS13045 9b40a69694ed334ec189438b91118422 363 PIRSF PIRSF028774 1 362 1.6E-190 T 21-04-2016 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 VFU_RS13045 9b40a69694ed334ec189438b91118422 363 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 357 84.969 T 21-04-2016 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 VFU_RS13045 9b40a69694ed334ec189438b91118422 363 PANTHER PTHR37524:SF2 2 362 7.0E-194 T 21-04-2016 VFU_RS13045 9b40a69694ed334ec189438b91118422 363 Pfam PF01728 FtsJ-like methyltransferase 188 262 5.0E-6 T 21-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 VFU_RS13045 9b40a69694ed334ec189438b91118422 363 Gene3D G3DSA:3.40.50.150 186 283 7.8E-13 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS13045 9b40a69694ed334ec189438b91118422 363 SUPERFAMILY SSF53335 186 281 5.99E-12 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS13045 9b40a69694ed334ec189438b91118422 363 PANTHER PTHR37524 2 362 7.0E-194 T 21-04-2016 VFU_RS05130 29dbc2bfc4f5189a3eafadaf6d8f9d23 490 SUPERFAMILY SSF53187 401 486 1.48E-59 T 21-04-2016 VFU_RS05130 29dbc2bfc4f5189a3eafadaf6d8f9d23 490 SUPERFAMILY SSF53187 16 186 1.48E-59 T 21-04-2016 VFU_RS05130 29dbc2bfc4f5189a3eafadaf6d8f9d23 490 Gene3D G3DSA:3.40.630.10 6 185 2.7E-104 T 21-04-2016 VFU_RS05130 29dbc2bfc4f5189a3eafadaf6d8f9d23 490 Gene3D G3DSA:3.40.630.10 401 487 2.7E-104 T 21-04-2016 VFU_RS05130 29dbc2bfc4f5189a3eafadaf6d8f9d23 490 Pfam PF01546 Peptidase family M20/M25/M40 77 471 1.2E-19 T 21-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 VFU_RS05130 29dbc2bfc4f5189a3eafadaf6d8f9d23 490 Pfam PF07687 Peptidase dimerisation domain 211 295 1.2E-7 T 21-04-2016 IPR011650 Peptidase M20, dimerisation domain VFU_RS05130 29dbc2bfc4f5189a3eafadaf6d8f9d23 490 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 13 486 2.5E-178 T 21-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VFU_RS05130 29dbc2bfc4f5189a3eafadaf6d8f9d23 490 PRINTS PR00934 X-His dipeptidase (M25) signature 210 227 2.9E-89 T 21-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VFU_RS05130 29dbc2bfc4f5189a3eafadaf6d8f9d23 490 PRINTS PR00934 X-His dipeptidase (M25) signature 105 123 2.9E-89 T 21-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VFU_RS05130 29dbc2bfc4f5189a3eafadaf6d8f9d23 490 PRINTS PR00934 X-His dipeptidase (M25) signature 84 103 2.9E-89 T 21-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VFU_RS05130 29dbc2bfc4f5189a3eafadaf6d8f9d23 490 PRINTS PR00934 X-His dipeptidase (M25) signature 255 274 2.9E-89 T 21-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VFU_RS05130 29dbc2bfc4f5189a3eafadaf6d8f9d23 490 PRINTS PR00934 X-His dipeptidase (M25) signature 454 476 2.9E-89 T 21-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VFU_RS05130 29dbc2bfc4f5189a3eafadaf6d8f9d23 490 PRINTS PR00934 X-His dipeptidase (M25) signature 367 385 2.9E-89 T 21-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VFU_RS05130 29dbc2bfc4f5189a3eafadaf6d8f9d23 490 PRINTS PR00934 X-His dipeptidase (M25) signature 163 181 2.9E-89 T 21-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VFU_RS05130 29dbc2bfc4f5189a3eafadaf6d8f9d23 490 PRINTS PR00934 X-His dipeptidase (M25) signature 432 448 2.9E-89 T 21-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VFU_RS05130 29dbc2bfc4f5189a3eafadaf6d8f9d23 490 PRINTS PR00934 X-His dipeptidase (M25) signature 139 156 2.9E-89 T 21-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VFU_RS05130 29dbc2bfc4f5189a3eafadaf6d8f9d23 490 PANTHER PTHR11014 208 283 4.2E-195 T 21-04-2016 VFU_RS05130 29dbc2bfc4f5189a3eafadaf6d8f9d23 490 PANTHER PTHR11014 334 490 4.2E-195 T 21-04-2016 VFU_RS05130 29dbc2bfc4f5189a3eafadaf6d8f9d23 490 PANTHER PTHR11014 1 189 4.2E-195 T 21-04-2016 VFU_RS05130 29dbc2bfc4f5189a3eafadaf6d8f9d23 490 PANTHER PTHR11014:SF54 334 490 4.2E-195 T 21-04-2016 VFU_RS05130 29dbc2bfc4f5189a3eafadaf6d8f9d23 490 PANTHER PTHR11014:SF54 1 189 4.2E-195 T 21-04-2016 VFU_RS05130 29dbc2bfc4f5189a3eafadaf6d8f9d23 490 PIRSF PIRSF016599 5 489 3.3E-212 T 21-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VFU_RS05130 29dbc2bfc4f5189a3eafadaf6d8f9d23 490 PANTHER PTHR11014:SF54 208 283 4.2E-195 T 21-04-2016 VFU_RS14725 9bd9c30834c5636f1ce690fa84da5bef 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 21-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VFU_RS14725 9bd9c30834c5636f1ce690fa84da5bef 253 Pfam PF00455 DeoR C terminal sensor domain 78 233 3.8E-44 T 21-04-2016 IPR014036 DeoR C-terminal sensor domain VFU_RS14725 9bd9c30834c5636f1ce690fa84da5bef 253 SMART SM00420 9 61 3.0E-14 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VFU_RS14725 9bd9c30834c5636f1ce690fa84da5bef 253 SUPERFAMILY SSF46785 9 64 7.3E-12 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS14725 9bd9c30834c5636f1ce690fa84da5bef 253 Gene3D G3DSA:3.40.50.1360 78 218 8.0E-15 T 21-04-2016 VFU_RS14725 9bd9c30834c5636f1ce690fa84da5bef 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 1.1E-5 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VFU_RS14725 9bd9c30834c5636f1ce690fa84da5bef 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 1.1E-5 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VFU_RS14725 9bd9c30834c5636f1ce690fa84da5bef 253 PANTHER PTHR30363:SF15 3 253 1.8E-142 T 21-04-2016 VFU_RS14725 9bd9c30834c5636f1ce690fa84da5bef 253 SUPERFAMILY SSF100950 79 234 4.67E-31 T 21-04-2016 VFU_RS14725 9bd9c30834c5636f1ce690fa84da5bef 253 PANTHER PTHR30363 3 253 1.8E-142 T 21-04-2016 VFU_RS14725 9bd9c30834c5636f1ce690fa84da5bef 253 Gene3D G3DSA:1.10.10.10 5 54 7.3E-7 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS14725 9bd9c30834c5636f1ce690fa84da5bef 253 Pfam PF08220 DeoR-like helix-turn-helix domain 9 61 1.5E-15 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VFU_RS14725 9bd9c30834c5636f1ce690fa84da5bef 253 SMART SM01134 73 234 4.4E-57 T 21-04-2016 VFU_RS01150 52d018b8b3cb9889453a4a57a5878f00 611 PANTHER PTHR13710:SF81 17 610 9.4E-298 T 21-04-2016 VFU_RS01150 52d018b8b3cb9889453a4a57a5878f00 611 Gene3D G3DSA:1.10.150.80 534 605 2.9E-23 T 21-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 VFU_RS01150 52d018b8b3cb9889453a4a57a5878f00 611 SMART SM00487 25 221 1.1E-29 T 21-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VFU_RS01150 52d018b8b3cb9889453a4a57a5878f00 611 Pfam PF16124 RecQ zinc-binding 346 407 3.4E-18 T 21-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain VFU_RS01150 52d018b8b3cb9889453a4a57a5878f00 611 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 17 606 2.9E-253 T 21-04-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 VFU_RS01150 52d018b8b3cb9889453a4a57a5878f00 611 SUPERFAMILY SSF52540 16 203 1.77E-42 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS01150 52d018b8b3cb9889453a4a57a5878f00 611 Pfam PF00271 Helicase conserved C-terminal domain 230 334 4.7E-19 T 21-04-2016 IPR001650 Helicase, C-terminal VFU_RS01150 52d018b8b3cb9889453a4a57a5878f00 611 PANTHER PTHR13710 17 610 9.4E-298 T 21-04-2016 VFU_RS01150 52d018b8b3cb9889453a4a57a5878f00 611 SUPERFAMILY SSF47819 534 608 5.01E-26 T 21-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 VFU_RS01150 52d018b8b3cb9889453a4a57a5878f00 611 Pfam PF00570 HRDC domain 537 603 5.5E-22 T 21-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 VFU_RS01150 52d018b8b3cb9889453a4a57a5878f00 611 Gene3D G3DSA:3.40.50.300 210 347 7.8E-50 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS01150 52d018b8b3cb9889453a4a57a5878f00 611 Pfam PF09382 RQC domain 409 517 6.8E-38 T 21-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 VFU_RS01150 52d018b8b3cb9889453a4a57a5878f00 611 SUPERFAMILY SSF52540 211 458 1.12E-63 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS01150 52d018b8b3cb9889453a4a57a5878f00 611 Gene3D G3DSA:3.40.50.300 17 206 1.2E-56 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS01150 52d018b8b3cb9889453a4a57a5878f00 611 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 19 466 1.2E-191 T 21-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 VFU_RS01150 52d018b8b3cb9889453a4a57a5878f00 611 Pfam PF00270 DEAD/DEAH box helicase 31 188 1.7E-18 T 21-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VFU_RS01150 52d018b8b3cb9889453a4a57a5878f00 611 SMART SM00341 533 609 5.5E-22 T 21-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 VFU_RS01150 52d018b8b3cb9889453a4a57a5878f00 611 SMART SM00490 253 334 1.2E-26 T 21-04-2016 IPR001650 Helicase, C-terminal VFU_RS01150 52d018b8b3cb9889453a4a57a5878f00 611 Gene3D G3DSA:1.10.10.10 348 517 3.4E-63 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS01150 52d018b8b3cb9889453a4a57a5878f00 611 SMART SM00956 414 517 1.9E-50 T 21-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 VFU_RS07240 bc2070b7c62200579cdc0f40af66ec09 206 SUPERFAMILY SSF52218 5 180 1.31E-50 T 21-04-2016 IPR029039 Flavoprotein-like domain VFU_RS07240 bc2070b7c62200579cdc0f40af66ec09 206 Gene3D G3DSA:3.40.50.360 5 179 5.0E-51 T 21-04-2016 IPR029039 Flavoprotein-like domain VFU_RS07240 bc2070b7c62200579cdc0f40af66ec09 206 PANTHER PTHR10204:SF42 4 199 1.3E-63 T 21-04-2016 VFU_RS07240 bc2070b7c62200579cdc0f40af66ec09 206 Pfam PF02525 Flavodoxin-like fold 5 172 4.0E-46 T 21-04-2016 IPR003680 Flavodoxin-like fold VFU_RS07240 bc2070b7c62200579cdc0f40af66ec09 206 PANTHER PTHR10204 4 199 1.3E-63 T 21-04-2016 VFU_RS02295 acee184a2b3e76454787111c39ee6985 334 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 1.9E-59 T 21-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 VFU_RS02295 acee184a2b3e76454787111c39ee6985 334 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 323 6.8E-119 T 21-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS02295 acee184a2b3e76454787111c39ee6985 334 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 152 2.5E-49 T 21-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 VFU_RS02295 acee184a2b3e76454787111c39ee6985 334 SUPERFAMILY SSF55347 152 314 1.31E-63 T 21-04-2016 VFU_RS02295 acee184a2b3e76454787111c39ee6985 334 Gene3D G3DSA:3.30.360.10 161 315 6.5E-67 T 21-04-2016 VFU_RS02295 acee184a2b3e76454787111c39ee6985 334 PANTHER PTHR10836 1 330 1.8E-222 T 21-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VFU_RS02295 acee184a2b3e76454787111c39ee6985 334 PANTHER PTHR10836:SF37 1 330 1.8E-222 T 21-04-2016 VFU_RS02295 acee184a2b3e76454787111c39ee6985 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 1.2E-28 T 21-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VFU_RS02295 acee184a2b3e76454787111c39ee6985 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 1.2E-28 T 21-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VFU_RS02295 acee184a2b3e76454787111c39ee6985 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 108 121 1.2E-28 T 21-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VFU_RS02295 acee184a2b3e76454787111c39ee6985 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 1.2E-28 T 21-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VFU_RS02295 acee184a2b3e76454787111c39ee6985 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 1.2E-28 T 21-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VFU_RS02295 acee184a2b3e76454787111c39ee6985 334 PIRSF PIRSF000149 1 333 5.9E-116 T 21-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VFU_RS02295 acee184a2b3e76454787111c39ee6985 334 Gene3D G3DSA:3.40.50.720 2 160 3.1E-60 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS02295 acee184a2b3e76454787111c39ee6985 334 SUPERFAMILY SSF51735 1 173 8.56E-53 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS02295 acee184a2b3e76454787111c39ee6985 334 SMART SM00846 3 152 1.0E-69 T 21-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 VFU_RS02295 acee184a2b3e76454787111c39ee6985 334 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 21-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 VFU_RS19610 ec964244416a572ee4122dbf676e782b 642 Pfam PF04408 Helicase associated domain (HA2) 330 390 9.4E-11 T 21-04-2016 IPR007502 Helicase-associated domain GO:0004386 VFU_RS19610 ec964244416a572ee4122dbf676e782b 642 SUPERFAMILY SSF52540 137 386 2.13E-44 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS19610 ec964244416a572ee4122dbf676e782b 642 Pfam PF00271 Helicase conserved C-terminal domain 146 268 5.1E-11 T 21-04-2016 IPR001650 Helicase, C-terminal VFU_RS19610 ec964244416a572ee4122dbf676e782b 642 SUPERFAMILY SSF52540 2 101 1.7E-13 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS19610 ec964244416a572ee4122dbf676e782b 642 SMART SM00490 168 269 5.1E-13 T 21-04-2016 IPR001650 Helicase, C-terminal VFU_RS19610 ec964244416a572ee4122dbf676e782b 642 PANTHER PTHR18934 1 373 1.8E-114 T 21-04-2016 VFU_RS19610 ec964244416a572ee4122dbf676e782b 642 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 1 640 2.5E-258 T 21-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type VFU_RS19610 ec964244416a572ee4122dbf676e782b 642 SMART SM00847 329 419 1.4E-7 T 21-04-2016 IPR007502 Helicase-associated domain GO:0004386 VFU_RS19610 ec964244416a572ee4122dbf676e782b 642 Gene3D G3DSA:3.40.50.300 2 102 2.7E-26 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS19610 ec964244416a572ee4122dbf676e782b 642 Gene3D G3DSA:3.40.50.300 142 281 9.3E-14 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS02830 9f29ec1ff1b09362d72d5b786fb45e11 157 Gene3D G3DSA:3.40.1280.10 1 156 8.8E-64 T 21-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VFU_RS02830 9f29ec1ff1b09362d72d5b786fb45e11 157 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 155 3.1E-57 T 21-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 VFU_RS02830 9f29ec1ff1b09362d72d5b786fb45e11 157 PANTHER PTHR12029:SF31 1 157 3.5E-72 T 21-04-2016 VFU_RS02830 9f29ec1ff1b09362d72d5b786fb45e11 157 PANTHER PTHR12029 1 157 3.5E-72 T 21-04-2016 VFU_RS02830 9f29ec1ff1b09362d72d5b786fb45e11 157 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 154 32.622 T 21-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 VFU_RS02830 9f29ec1ff1b09362d72d5b786fb45e11 157 SUPERFAMILY SSF75217 2 155 3.99E-43 T 21-04-2016 IPR029028 Alpha/beta knot methyltransferases VFU_RS02830 9f29ec1ff1b09362d72d5b786fb45e11 157 PIRSF PIRSF029256 1 157 1.4E-65 T 21-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 VFU_RS02830 9f29ec1ff1b09362d72d5b786fb45e11 157 Pfam PF00588 SpoU rRNA Methylase family 3 144 2.5E-34 T 21-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VFU_RS01905 8e2207375ea39d8f4d70c4028f82c745 460 SUPERFAMILY SSF49503 158 280 1.8E-21 T 21-04-2016 IPR008972 Cupredoxin VFU_RS01905 8e2207375ea39d8f4d70c4028f82c745 460 ProSitePatterns PS00080 Multicopper oxidases signature 2. 442 453 - T 21-04-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 VFU_RS01905 8e2207375ea39d8f4d70c4028f82c745 460 PANTHER PTHR11709 54 459 1.3E-74 T 21-04-2016 VFU_RS01905 8e2207375ea39d8f4d70c4028f82c745 460 SUPERFAMILY SSF49503 33 155 2.39E-39 T 21-04-2016 IPR008972 Cupredoxin VFU_RS01905 8e2207375ea39d8f4d70c4028f82c745 460 PANTHER PTHR11709:SF33 54 459 1.3E-74 T 21-04-2016 VFU_RS01905 8e2207375ea39d8f4d70c4028f82c745 460 Pfam PF07731 Multicopper oxidase 366 456 5.7E-25 T 21-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 VFU_RS01905 8e2207375ea39d8f4d70c4028f82c745 460 Pfam PF00394 Multicopper oxidase 164 275 8.4E-8 T 21-04-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 VFU_RS01905 8e2207375ea39d8f4d70c4028f82c745 460 Gene3D G3DSA:2.60.40.420 342 459 9.5E-35 T 21-04-2016 IPR008972 Cupredoxin VFU_RS01905 8e2207375ea39d8f4d70c4028f82c745 460 Gene3D G3DSA:2.60.40.420 30 154 5.5E-34 T 21-04-2016 IPR008972 Cupredoxin VFU_RS01905 8e2207375ea39d8f4d70c4028f82c745 460 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 2 25 2.0E-6 T 21-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VFU_RS01905 8e2207375ea39d8f4d70c4028f82c745 460 Gene3D G3DSA:2.60.40.420 155 283 1.1E-22 T 21-04-2016 IPR008972 Cupredoxin VFU_RS01905 8e2207375ea39d8f4d70c4028f82c745 460 Pfam PF07732 Multicopper oxidase 47 156 5.0E-38 T 21-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 VFU_RS01905 8e2207375ea39d8f4d70c4028f82c745 460 SUPERFAMILY SSF49503 312 459 3.36E-34 T 21-04-2016 IPR008972 Cupredoxin VFU_RS10145 58f595812c32e00b4e701f30d9d16949 76 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 21-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 VFU_RS10145 58f595812c32e00b4e701f30d9d16949 76 PANTHER PTHR34386:SF1 1 76 1.8E-19 T 21-04-2016 VFU_RS10145 58f595812c32e00b4e701f30d9d16949 76 Pfam PF00462 Glutaredoxin 4 59 3.1E-12 T 21-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VFU_RS10145 58f595812c32e00b4e701f30d9d16949 76 Gene3D G3DSA:3.40.30.10 3 74 1.6E-19 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS10145 58f595812c32e00b4e701f30d9d16949 76 PANTHER PTHR34386 1 76 1.8E-19 T 21-04-2016 VFU_RS10145 58f595812c32e00b4e701f30d9d16949 76 SUPERFAMILY SSF52833 3 69 4.55E-14 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS09620 b0ab2451ff1c38cbc7ec5cba8b217cb0 270 Pfam PF00106 short chain dehydrogenase 8 196 1.3E-43 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS09620 b0ab2451ff1c38cbc7ec5cba8b217cb0 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 2.4E-5 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS09620 b0ab2451ff1c38cbc7ec5cba8b217cb0 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 2.4E-5 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS09620 b0ab2451ff1c38cbc7ec5cba8b217cb0 270 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 21-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VFU_RS09620 b0ab2451ff1c38cbc7ec5cba8b217cb0 270 SUPERFAMILY SSF51735 1 258 1.39E-57 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS09620 b0ab2451ff1c38cbc7ec5cba8b217cb0 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 9.3E-31 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS09620 b0ab2451ff1c38cbc7ec5cba8b217cb0 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 9.3E-31 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS09620 b0ab2451ff1c38cbc7ec5cba8b217cb0 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 9.3E-31 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS09620 b0ab2451ff1c38cbc7ec5cba8b217cb0 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 9.3E-31 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS09620 b0ab2451ff1c38cbc7ec5cba8b217cb0 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 9.3E-31 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS09620 b0ab2451ff1c38cbc7ec5cba8b217cb0 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 9.3E-31 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS09620 b0ab2451ff1c38cbc7ec5cba8b217cb0 270 Gene3D G3DSA:3.40.50.720 3 258 3.7E-60 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS09620 b0ab2451ff1c38cbc7ec5cba8b217cb0 270 PANTHER PTHR24322 11 140 7.0E-36 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS09620 b0ab2451ff1c38cbc7ec5cba8b217cb0 270 PANTHER PTHR24322 156 186 7.0E-36 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS07660 61d1bc456c45f76b19ddd823b01d32c5 455 PANTHER PTHR33451 1 441 4.2E-196 T 21-04-2016 VFU_RS07660 61d1bc456c45f76b19ddd823b01d32c5 455 PANTHER PTHR33451:SF5 1 441 4.2E-196 T 21-04-2016 VFU_RS07660 61d1bc456c45f76b19ddd823b01d32c5 455 Pfam PF03553 Na+/H+ antiporter family 24 223 3.3E-14 T 21-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VFU_RS04675 be13e5cefd42b03f8705ea7041d26123 175 PIRSF PIRSF025550 1 174 1.3E-84 T 21-04-2016 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT VFU_RS04675 be13e5cefd42b03f8705ea7041d26123 175 PANTHER PTHR10094:SF16 1 145 3.1E-64 T 21-04-2016 VFU_RS04675 be13e5cefd42b03f8705ea7041d26123 175 SUPERFAMILY SSF55718 40 139 3.06E-20 T 21-04-2016 IPR003033 SCP2 sterol-binding domain VFU_RS04675 be13e5cefd42b03f8705ea7041d26123 175 Gene3D G3DSA:3.30.1050.10 61 136 8.7E-11 T 21-04-2016 IPR003033 SCP2 sterol-binding domain VFU_RS04675 be13e5cefd42b03f8705ea7041d26123 175 Pfam PF02036 SCP-2 sterol transfer family 45 134 2.2E-17 T 21-04-2016 IPR003033 SCP2 sterol-binding domain VFU_RS04675 be13e5cefd42b03f8705ea7041d26123 175 PANTHER PTHR10094 1 145 3.1E-64 T 21-04-2016 VFU_RS00560 94dd439bff2148cb9429d5417d829599 328 Pfam PF00534 Glycosyl transferases group 1 154 304 9.3E-34 T 21-04-2016 IPR001296 Glycosyl transferase, family 1 VFU_RS00560 94dd439bff2148cb9429d5417d829599 328 SUPERFAMILY SSF53756 30 324 3.72E-58 T 21-04-2016 VFU_RS00560 94dd439bff2148cb9429d5417d829599 328 Gene3D G3DSA:3.40.50.2000 150 304 5.2E-24 T 21-04-2016 VFU_RS00560 94dd439bff2148cb9429d5417d829599 328 PANTHER PTHR12526 51 326 5.8E-50 T 21-04-2016 VFU_RS22695 556be2a317558dd8e7ca342037da3ea8 70 Pfam PF12002 MgsA AAA+ ATPase C terminal 1 70 1.6E-19 T 21-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal VFU_RS22695 556be2a317558dd8e7ca342037da3ea8 70 PANTHER PTHR13779 1 70 1.0E-20 T 21-04-2016 VFU_RS22695 556be2a317558dd8e7ca342037da3ea8 70 SUPERFAMILY SSF48019 1 70 4.93E-20 T 21-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 VFU_RS22695 556be2a317558dd8e7ca342037da3ea8 70 Gene3D G3DSA:1.10.3710.10 1 70 8.1E-27 T 21-04-2016 VFU_RS07990 c5e5184e9c4b976d31e6ac74a22a2a7a 445 SUPERFAMILY SSF46785 13 123 3.94E-43 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS07990 c5e5184e9c4b976d31e6ac74a22a2a7a 445 PIRSF PIRSF018282 1 445 5.5E-245 T 21-04-2016 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 VFU_RS07990 c5e5184e9c4b976d31e6ac74a22a2a7a 445 Pfam PF17193 MukF C-terminal domain 288 445 2.0E-77 T 21-04-2016 IPR033441 Chromosome partition protein MukF, C-terminal domain VFU_RS07990 c5e5184e9c4b976d31e6ac74a22a2a7a 445 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 6 445 53.937 T 21-04-2016 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 VFU_RS07990 c5e5184e9c4b976d31e6ac74a22a2a7a 445 SUPERFAMILY SSF140570 124 286 7.06E-78 T 21-04-2016 IPR033440 Chromosome partition protein MukF, middle domain VFU_RS07990 c5e5184e9c4b976d31e6ac74a22a2a7a 445 Gene3D G3DSA:1.10.10.10 29 123 7.9E-44 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS07990 c5e5184e9c4b976d31e6ac74a22a2a7a 445 Pfam PF03882 MukF winged-helix domain 10 122 9.4E-53 T 21-04-2016 IPR033439 Chromosome partition protein MukF, winged-helix domain VFU_RS07990 c5e5184e9c4b976d31e6ac74a22a2a7a 445 Pfam PF17192 MukF middle domain 126 286 5.7E-80 T 21-04-2016 IPR033440 Chromosome partition protein MukF, middle domain VFU_RS05245 64fac3d4d0fc48273185153971f5f820 280 PANTHER PTHR10804 1 277 6.4E-167 T 21-04-2016 VFU_RS05245 64fac3d4d0fc48273185153971f5f820 280 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 4 267 7.9E-91 T 21-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 VFU_RS05245 64fac3d4d0fc48273185153971f5f820 280 SUPERFAMILY SSF55920 4 268 1.07E-86 T 21-04-2016 IPR000994 Peptidase M24, structural domain VFU_RS05245 64fac3d4d0fc48273185153971f5f820 280 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 185 203 - T 21-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 VFU_RS05245 64fac3d4d0fc48273185153971f5f820 280 PRINTS PR00599 Methionine aminopeptidase-1 signature 209 221 2.9E-15 T 21-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase VFU_RS05245 64fac3d4d0fc48273185153971f5f820 280 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 2.9E-15 T 21-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase VFU_RS05245 64fac3d4d0fc48273185153971f5f820 280 PRINTS PR00599 Methionine aminopeptidase-1 signature 179 191 2.9E-15 T 21-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase VFU_RS05245 64fac3d4d0fc48273185153971f5f820 280 Pfam PF00557 Metallopeptidase family M24 12 259 1.0E-50 T 21-04-2016 IPR000994 Peptidase M24, structural domain VFU_RS05245 64fac3d4d0fc48273185153971f5f820 280 PANTHER PTHR10804:SF75 1 277 6.4E-167 T 21-04-2016 VFU_RS05245 64fac3d4d0fc48273185153971f5f820 280 Hamap MF_01974 Methionine aminopeptidase [map]. 3 268 41.874 T 21-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 VFU_RS05245 64fac3d4d0fc48273185153971f5f820 280 Gene3D G3DSA:3.90.230.10 4 273 1.2E-95 T 21-04-2016 IPR000994 Peptidase M24, structural domain VFU_RS05785 b253f1f9342613a6b403d47e6e9a0c84 180 SUPERFAMILY SSF55021 88 176 2.11E-21 T 21-04-2016 VFU_RS05785 b253f1f9342613a6b403d47e6e9a0c84 180 PIRSF PIRSF028103 1 178 3.9E-61 T 21-04-2016 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 VFU_RS05785 b253f1f9342613a6b403d47e6e9a0c84 180 Gene3D G3DSA:3.30.70.260 1 83 2.9E-27 T 21-04-2016 VFU_RS05785 b253f1f9342613a6b403d47e6e9a0c84 180 SUPERFAMILY SSF55021 1 83 8.46E-18 T 21-04-2016 VFU_RS05785 b253f1f9342613a6b403d47e6e9a0c84 180 Gene3D G3DSA:3.30.70.260 88 180 1.4E-37 T 21-04-2016 VFU_RS05785 b253f1f9342613a6b403d47e6e9a0c84 180 PANTHER PTHR34875 1 180 5.6E-63 T 21-04-2016 VFU_RS05785 b253f1f9342613a6b403d47e6e9a0c84 180 PANTHER PTHR34875:SF3 1 180 5.6E-63 T 21-04-2016 VFU_RS05785 b253f1f9342613a6b403d47e6e9a0c84 180 Pfam PF13740 ACT domain 3 78 1.2E-24 T 21-04-2016 VFU_RS14970 7ee285a9482f15bad24ad17e4647f14d 286 Pfam PF05099 Tellurite resistance protein TerB 44 177 2.6E-17 T 21-04-2016 IPR007791 Co-chaperone DjlA, N-terminal VFU_RS14970 7ee285a9482f15bad24ad17e4647f14d 286 PRINTS PR00625 DnaJ domain signature 240 255 2.8E-11 T 21-04-2016 IPR001623 DnaJ domain VFU_RS14970 7ee285a9482f15bad24ad17e4647f14d 286 PRINTS PR00625 DnaJ domain signature 222 240 2.8E-11 T 21-04-2016 IPR001623 DnaJ domain VFU_RS14970 7ee285a9482f15bad24ad17e4647f14d 286 PRINTS PR00625 DnaJ domain signature 264 284 2.8E-11 T 21-04-2016 IPR001623 DnaJ domain VFU_RS14970 7ee285a9482f15bad24ad17e4647f14d 286 Gene3D G3DSA:1.10.3680.10 218 224 6.3E-40 T 21-04-2016 IPR029024 TerB-like VFU_RS14970 7ee285a9482f15bad24ad17e4647f14d 286 Gene3D G3DSA:1.10.3680.10 20 185 6.3E-40 T 21-04-2016 IPR029024 TerB-like VFU_RS14970 7ee285a9482f15bad24ad17e4647f14d 286 SUPERFAMILY SSF46565 138 282 4.5E-33 T 21-04-2016 IPR001623 DnaJ domain VFU_RS14970 7ee285a9482f15bad24ad17e4647f14d 286 Pfam PF00226 DnaJ domain 220 282 5.7E-14 T 21-04-2016 IPR001623 DnaJ domain VFU_RS14970 7ee285a9482f15bad24ad17e4647f14d 286 SMART SM00271 219 284 1.9E-20 T 21-04-2016 IPR001623 DnaJ domain VFU_RS14970 7ee285a9482f15bad24ad17e4647f14d 286 Gene3D G3DSA:1.10.287.110 225 282 2.0E-16 T 21-04-2016 IPR001623 DnaJ domain VFU_RS14970 7ee285a9482f15bad24ad17e4647f14d 286 PANTHER PTHR24078 220 277 5.1E-12 T 21-04-2016 VFU_RS14970 7ee285a9482f15bad24ad17e4647f14d 286 Hamap MF_01153 DnaJ-like protein DjlA [djlA]. 1 286 40.191 T 21-04-2016 IPR023749 Co-chaperone DjlA GO:0051087 VFU_RS13250 d0f13c60ef930070bf15701c869f0ad1 200 SUPERFAMILY SSF51064 145 200 3.01E-19 T 21-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 VFU_RS13250 d0f13c60ef930070bf15701c869f0ad1 200 Pfam PF01025 GrpE 39 200 2.0E-54 T 21-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VFU_RS13250 d0f13c60ef930070bf15701c869f0ad1 200 PRINTS PR00773 GrpE protein signature 97 112 7.4E-29 T 21-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VFU_RS13250 d0f13c60ef930070bf15701c869f0ad1 200 PRINTS PR00773 GrpE protein signature 69 85 7.4E-29 T 21-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VFU_RS13250 d0f13c60ef930070bf15701c869f0ad1 200 PRINTS PR00773 GrpE protein signature 179 198 7.4E-29 T 21-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VFU_RS13250 d0f13c60ef930070bf15701c869f0ad1 200 PRINTS PR00773 GrpE protein signature 152 167 7.4E-29 T 21-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VFU_RS13250 d0f13c60ef930070bf15701c869f0ad1 200 Gene3D G3DSA:3.90.20.20 44 143 7.1E-32 T 21-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil VFU_RS13250 d0f13c60ef930070bf15701c869f0ad1 200 Gene3D G3DSA:2.30.22.10 144 200 8.2E-27 T 21-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 VFU_RS13250 d0f13c60ef930070bf15701c869f0ad1 200 ProSitePatterns PS01071 grpE protein signature. 155 198 - T 21-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VFU_RS13250 d0f13c60ef930070bf15701c869f0ad1 200 SUPERFAMILY SSF58014 46 144 5.1E-29 T 21-04-2016 VFU_RS13250 d0f13c60ef930070bf15701c869f0ad1 200 PANTHER PTHR21237 32 200 3.2E-64 T 21-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VFU_RS13250 d0f13c60ef930070bf15701c869f0ad1 200 Hamap MF_01151 Protein GrpE [grpE]. 2 200 22.199 T 21-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VFU_RS10970 948c13260f351934e29dea2f52a8ae4c 339 Pfam PF14842 FliG N-terminal domain 15 108 3.0E-16 T 21-04-2016 IPR028263 Flagellar motor switch protein FliG, N-terminal domain VFU_RS10970 948c13260f351934e29dea2f52a8ae4c 339 Pfam PF14841 FliG middle domain 123 194 2.8E-10 T 21-04-2016 IPR032779 Flagellar motor switch protein FliG, middle domain VFU_RS10970 948c13260f351934e29dea2f52a8ae4c 339 PANTHER PTHR30534 1 339 5.4E-54 T 21-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VFU_RS10970 948c13260f351934e29dea2f52a8ae4c 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 41 67 4.6E-18 T 21-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VFU_RS10970 948c13260f351934e29dea2f52a8ae4c 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 12 28 4.6E-18 T 21-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VFU_RS10970 948c13260f351934e29dea2f52a8ae4c 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 121 144 4.6E-18 T 21-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VFU_RS10970 948c13260f351934e29dea2f52a8ae4c 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 254 274 4.6E-18 T 21-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VFU_RS10970 948c13260f351934e29dea2f52a8ae4c 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 278 304 4.6E-18 T 21-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VFU_RS10970 948c13260f351934e29dea2f52a8ae4c 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 232 252 4.6E-18 T 21-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VFU_RS10970 948c13260f351934e29dea2f52a8ae4c 339 Gene3D G3DSA:1.10.220.30 203 335 9.1E-28 T 21-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical VFU_RS10970 948c13260f351934e29dea2f52a8ae4c 339 Pfam PF01706 FliG C-terminal domain 225 330 1.1E-29 T 21-04-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal VFU_RS10970 948c13260f351934e29dea2f52a8ae4c 339 SUPERFAMILY SSF48029 13 113 1.67E-13 T 21-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical VFU_RS10970 948c13260f351934e29dea2f52a8ae4c 339 PANTHER PTHR30534:SF0 1 339 5.4E-54 T 21-04-2016 VFU_RS10970 948c13260f351934e29dea2f52a8ae4c 339 SUPERFAMILY SSF48029 122 330 3.4E-44 T 21-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical VFU_RS10970 948c13260f351934e29dea2f52a8ae4c 339 Gene3D G3DSA:1.10.220.30 15 60 6.4E-8 T 21-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical VFU_RS10970 948c13260f351934e29dea2f52a8ae4c 339 Gene3D G3DSA:1.10.220.30 115 189 4.4E-9 T 21-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical VFU_RS08625 8d52f4ec37ce10f450337b160d33e249 238 PANTHER PTHR30231:SF11 10 235 1.8E-68 T 21-04-2016 VFU_RS08625 8d52f4ec37ce10f450337b160d33e249 238 Pfam PF00929 Exonuclease 49 219 1.7E-15 T 21-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VFU_RS08625 8d52f4ec37ce10f450337b160d33e249 238 SMART SM00479 47 228 1.8E-21 T 21-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VFU_RS08625 8d52f4ec37ce10f450337b160d33e249 238 Gene3D G3DSA:3.30.420.10 41 228 8.9E-47 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VFU_RS08625 8d52f4ec37ce10f450337b160d33e249 238 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 43 228 1.7E-25 T 21-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS08625 8d52f4ec37ce10f450337b160d33e249 238 PANTHER PTHR30231 10 235 1.8E-68 T 21-04-2016 VFU_RS08625 8d52f4ec37ce10f450337b160d33e249 238 SUPERFAMILY SSF53098 40 226 8.6E-40 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VFU_RS13545 1fadc5c837430040c16805d4c4792516 160 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 117 1.2E-40 T 21-04-2016 IPR000944 Transcription regulator Rrf2-type VFU_RS13545 1fadc5c837430040c16805d4c4792516 160 SUPERFAMILY SSF46785 1 117 6.82E-31 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS13545 1fadc5c837430040c16805d4c4792516 160 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 36 54 - T 21-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site VFU_RS13545 1fadc5c837430040c16805d4c4792516 160 Pfam PF02082 Transcriptional regulator 1 70 1.3E-21 T 21-04-2016 IPR000944 Transcription regulator Rrf2-type VFU_RS13545 1fadc5c837430040c16805d4c4792516 160 PANTHER PTHR33221 1 139 4.3E-59 T 21-04-2016 VFU_RS13545 1fadc5c837430040c16805d4c4792516 160 PANTHER PTHR33221:SF1 1 139 4.3E-59 T 21-04-2016 VFU_RS13545 1fadc5c837430040c16805d4c4792516 160 Gene3D G3DSA:1.10.10.10 2 120 1.0E-26 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS12765 03583c56eb2bad3658fddd899e058f52 366 SUPERFAMILY SSF56935 33 366 1.5E-38 T 21-04-2016 VFU_RS12765 03583c56eb2bad3658fddd899e058f52 366 PRINTS PR00184 Neisseria sp. porin signature 238 258 2.2E-5 T 21-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 VFU_RS12765 03583c56eb2bad3658fddd899e058f52 366 PRINTS PR00184 Neisseria sp. porin signature 162 179 2.2E-5 T 21-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 VFU_RS12765 03583c56eb2bad3658fddd899e058f52 366 PRINTS PR00184 Neisseria sp. porin signature 62 87 2.2E-5 T 21-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 VFU_RS12765 03583c56eb2bad3658fddd899e058f52 366 Gene3D G3DSA:2.40.160.10 33 366 3.6E-37 T 21-04-2016 IPR023614 Porin domain VFU_RS12765 03583c56eb2bad3658fddd899e058f52 366 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 358 366 3.8E-6 T 21-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 VFU_RS12765 03583c56eb2bad3658fddd899e058f52 366 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 163 174 3.8E-6 T 21-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 VFU_RS12765 03583c56eb2bad3658fddd899e058f52 366 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 107 117 3.8E-6 T 21-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 VFU_RS12765 03583c56eb2bad3658fddd899e058f52 366 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 60 71 3.8E-6 T 21-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 VFU_RS12765 03583c56eb2bad3658fddd899e058f52 366 Pfam PF13609 Gram-negative porin 12 323 6.5E-32 T 21-04-2016 VFU_RS14520 d3ad45ac7c3cfba2e1ec119039b55233 348 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 6 342 27.685 T 21-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS14520 d3ad45ac7c3cfba2e1ec119039b55233 348 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 11 227 3.2E-53 T 21-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS14520 d3ad45ac7c3cfba2e1ec119039b55233 348 SUPERFAMILY SSF55120 6 338 5.32E-92 T 21-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS14520 d3ad45ac7c3cfba2e1ec119039b55233 348 PANTHER PTHR13326 10 338 1.0E-61 T 21-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS14520 d3ad45ac7c3cfba2e1ec119039b55233 348 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 78 91 - T 21-04-2016 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS14520 d3ad45ac7c3cfba2e1ec119039b55233 348 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 188 337 3.1E-19 T 21-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS14520 d3ad45ac7c3cfba2e1ec119039b55233 348 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 9 171 2.4E-40 T 21-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS09945 aabc35f0a42390ac6319024d676ed8df 347 Pfam PF00586 AIR synthase related protein, N-terminal domain 50 157 4.9E-18 T 21-04-2016 IPR016188 PurM-like, N-terminal domain VFU_RS09945 aabc35f0a42390ac6319024d676ed8df 347 TIGRFAM TIGR00476 selD: selenide, water dikinase 7 313 7.1E-137 T 21-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 VFU_RS09945 aabc35f0a42390ac6319024d676ed8df 347 Gene3D G3DSA:3.90.650.10 174 342 1.2E-18 T 21-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VFU_RS09945 aabc35f0a42390ac6319024d676ed8df 347 Hamap MF_00625 Selenide, water dikinase [selD]. 5 347 44.653 T 21-04-2016 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 VFU_RS09945 aabc35f0a42390ac6319024d676ed8df 347 PANTHER PTHR10256 3 332 3.7E-136 T 21-04-2016 VFU_RS09945 aabc35f0a42390ac6319024d676ed8df 347 Pfam PF02769 AIR synthase related protein, C-terminal domain 169 341 1.3E-27 T 21-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VFU_RS09945 aabc35f0a42390ac6319024d676ed8df 347 SUPERFAMILY SSF56042 164 339 9.72E-51 T 21-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VFU_RS09945 aabc35f0a42390ac6319024d676ed8df 347 PIRSF PIRSF036407 1 345 9.7E-120 T 21-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 VFU_RS09945 aabc35f0a42390ac6319024d676ed8df 347 Gene3D G3DSA:3.30.1330.10 29 161 1.2E-30 T 21-04-2016 IPR016188 PurM-like, N-terminal domain VFU_RS09945 aabc35f0a42390ac6319024d676ed8df 347 SUPERFAMILY SSF55326 7 158 1.15E-40 T 21-04-2016 VFU_RS07035 ce6f380d35de4e6fbc99ed31f443ea9a 100 PANTHER PTHR10815 1 100 1.5E-43 T 21-04-2016 VFU_RS07035 ce6f380d35de4e6fbc99ed31f443ea9a 100 Gene3D G3DSA:1.10.10.10 2 86 2.0E-23 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS07035 ce6f380d35de4e6fbc99ed31f443ea9a 100 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 4 83 9.7E-23 T 21-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 VFU_RS07035 ce6f380d35de4e6fbc99ed31f443ea9a 100 PANTHER PTHR10815:SF2 1 100 1.5E-43 T 21-04-2016 VFU_RS07035 ce6f380d35de4e6fbc99ed31f443ea9a 100 SUPERFAMILY SSF46767 2 84 6.8E-25 T 21-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 VFU_RS04870 fd7cec70c872615ca4a4891aecf5355d 357 PANTHER PTHR21225 1 348 7.6E-221 T 21-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 VFU_RS04870 fd7cec70c872615ca4a4891aecf5355d 357 Gene3D G3DSA:3.20.20.70 11 347 5.9E-153 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS04870 fd7cec70c872615ca4a4891aecf5355d 357 PIRSF PIRSF001361 1 353 3.1E-162 T 21-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 VFU_RS04870 fd7cec70c872615ca4a4891aecf5355d 357 SUPERFAMILY SSF51569 8 345 2.51E-136 T 21-04-2016 VFU_RS04870 fd7cec70c872615ca4a4891aecf5355d 357 Pfam PF00793 DAHP synthetase I family 42 340 1.2E-103 T 21-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 VFU_RS04870 fd7cec70c872615ca4a4891aecf5355d 357 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 8 347 1.5E-161 T 21-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 VFU_RS07880 9523e9d15e78ae5db653779ec36f7aa6 73 PANTHER PTHR11544:SF52 1 73 2.1E-44 T 21-04-2016 VFU_RS07880 9523e9d15e78ae5db653779ec36f7aa6 73 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 21-04-2016 IPR019844 Cold-shock conserved site VFU_RS07880 9523e9d15e78ae5db653779ec36f7aa6 73 SMART SM00357 3 67 1.9E-26 T 21-04-2016 IPR011129 Cold shock protein GO:0003676 VFU_RS07880 9523e9d15e78ae5db653779ec36f7aa6 73 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 68 3.5E-43 T 21-04-2016 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355|GO:0006950 VFU_RS07880 9523e9d15e78ae5db653779ec36f7aa6 73 SUPERFAMILY SSF50249 1 67 1.29E-23 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS07880 9523e9d15e78ae5db653779ec36f7aa6 73 PIRSF PIRSF002599 1 73 4.1E-23 T 21-04-2016 IPR012156 Cold shock, CspA GO:0003676 VFU_RS07880 9523e9d15e78ae5db653779ec36f7aa6 73 Gene3D G3DSA:2.40.50.140 1 65 5.3E-30 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS07880 9523e9d15e78ae5db653779ec36f7aa6 73 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 6.4E-28 T 21-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VFU_RS07880 9523e9d15e78ae5db653779ec36f7aa6 73 PANTHER PTHR11544 1 73 2.1E-44 T 21-04-2016 VFU_RS07880 9523e9d15e78ae5db653779ec36f7aa6 73 PRINTS PR00050 Cold shock protein signature 4 19 4.8E-15 T 21-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VFU_RS07880 9523e9d15e78ae5db653779ec36f7aa6 73 PRINTS PR00050 Cold shock protein signature 25 34 4.8E-15 T 21-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VFU_RS07880 9523e9d15e78ae5db653779ec36f7aa6 73 PRINTS PR00050 Cold shock protein signature 40 58 4.8E-15 T 21-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VFU_RS02795 4964b3d1f23223a99aa6e28ce1d41398 304 TIGRFAM TIGR00746 arcC: carbamate kinase 5 301 8.1E-121 T 21-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 VFU_RS02795 4964b3d1f23223a99aa6e28ce1d41398 304 PANTHER PTHR30409:SF1 1 303 4.4E-142 T 21-04-2016 VFU_RS02795 4964b3d1f23223a99aa6e28ce1d41398 304 PRINTS PR01469 Bacterial carbamate kinase signature 257 272 1.3E-61 T 21-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 VFU_RS02795 4964b3d1f23223a99aa6e28ce1d41398 304 PRINTS PR01469 Bacterial carbamate kinase signature 153 172 1.3E-61 T 21-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 VFU_RS02795 4964b3d1f23223a99aa6e28ce1d41398 304 PRINTS PR01469 Bacterial carbamate kinase signature 74 92 1.3E-61 T 21-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 VFU_RS02795 4964b3d1f23223a99aa6e28ce1d41398 304 PRINTS PR01469 Bacterial carbamate kinase signature 176 194 1.3E-61 T 21-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 VFU_RS02795 4964b3d1f23223a99aa6e28ce1d41398 304 PRINTS PR01469 Bacterial carbamate kinase signature 206 221 1.3E-61 T 21-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 VFU_RS02795 4964b3d1f23223a99aa6e28ce1d41398 304 PRINTS PR01469 Bacterial carbamate kinase signature 105 124 1.3E-61 T 21-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 VFU_RS02795 4964b3d1f23223a99aa6e28ce1d41398 304 PRINTS PR01469 Bacterial carbamate kinase signature 44 63 1.3E-61 T 21-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 VFU_RS02795 4964b3d1f23223a99aa6e28ce1d41398 304 PANTHER PTHR30409 1 303 4.4E-142 T 21-04-2016 VFU_RS02795 4964b3d1f23223a99aa6e28ce1d41398 304 SUPERFAMILY SSF53633 4 300 2.23E-78 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VFU_RS02795 4964b3d1f23223a99aa6e28ce1d41398 304 Pfam PF00696 Amino acid kinase family 5 280 2.1E-29 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VFU_RS02795 4964b3d1f23223a99aa6e28ce1d41398 304 Gene3D G3DSA:3.40.1160.10 3 301 5.5E-100 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VFU_RS02795 4964b3d1f23223a99aa6e28ce1d41398 304 PIRSF PIRSF000723 2 302 4.2E-114 T 21-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 VFU_RS01635 f3273aef28ed8c624d3844989f9777d9 223 Gene3D G3DSA:1.10.3720.10 15 219 2.3E-45 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS01635 f3273aef28ed8c624d3844989f9777d9 223 PANTHER PTHR30614:SF16 1 223 2.7E-135 T 21-04-2016 VFU_RS01635 f3273aef28ed8c624d3844989f9777d9 223 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 112 4.0E-25 T 21-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 VFU_RS01635 f3273aef28ed8c624d3844989f9777d9 223 SUPERFAMILY SSF161098 13 203 4.71E-43 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS01635 f3273aef28ed8c624d3844989f9777d9 223 PANTHER PTHR30614 1 223 2.7E-135 T 21-04-2016 VFU_RS01635 f3273aef28ed8c624d3844989f9777d9 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 217 2.8E-17 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS03515 b1acad3936a86ac3448a2f80159d850d 183 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 182 2.8E-87 T 21-04-2016 IPR006513 Conserved hypothetical protein CHP01626, YtfJ VFU_RS03515 b1acad3936a86ac3448a2f80159d850d 183 Gene3D G3DSA:3.40.30.10 16 176 4.9E-6 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS03515 b1acad3936a86ac3448a2f80159d850d 183 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 23 181 2.1E-75 T 21-04-2016 IPR006513 Conserved hypothetical protein CHP01626, YtfJ VFU_RS04785 9db43db4f00e1adc53e97f99dd27f8e2 296 Gene3D G3DSA:3.40.190.10 95 196 1.3E-5 T 21-04-2016 VFU_RS04785 9db43db4f00e1adc53e97f99dd27f8e2 296 PANTHER PTHR30293:SF2 2 296 7.4E-192 T 21-04-2016 VFU_RS04785 9db43db4f00e1adc53e97f99dd27f8e2 296 Gene3D G3DSA:3.40.190.10 197 232 9.3E-4 T 21-04-2016 VFU_RS04785 9db43db4f00e1adc53e97f99dd27f8e2 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 6.0E-15 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS04785 9db43db4f00e1adc53e97f99dd27f8e2 296 PANTHER PTHR30293 2 296 7.4E-192 T 21-04-2016 VFU_RS04785 9db43db4f00e1adc53e97f99dd27f8e2 296 Pfam PF03466 LysR substrate binding domain 95 288 3.9E-12 T 21-04-2016 IPR005119 LysR, substrate-binding VFU_RS04785 9db43db4f00e1adc53e97f99dd27f8e2 296 Gene3D G3DSA:1.10.10.10 3 81 7.8E-20 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS04785 9db43db4f00e1adc53e97f99dd27f8e2 296 SUPERFAMILY SSF53850 92 288 3.26E-23 T 21-04-2016 VFU_RS04785 9db43db4f00e1adc53e97f99dd27f8e2 296 SUPERFAMILY SSF46785 2 85 2.18E-18 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS00950 236aa15270e5df401d8da3792aff8b12 1039 SUPERFAMILY SSF82693 46 128 4.97E-20 T 21-04-2016 VFU_RS00950 236aa15270e5df401d8da3792aff8b12 1039 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1038 0.0 T 21-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 VFU_RS00950 236aa15270e5df401d8da3792aff8b12 1039 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 6.3E-32 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS00950 236aa15270e5df401d8da3792aff8b12 1039 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 6.3E-32 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS00950 236aa15270e5df401d8da3792aff8b12 1039 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 6.3E-32 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS00950 236aa15270e5df401d8da3792aff8b12 1039 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 6.3E-32 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS00950 236aa15270e5df401d8da3792aff8b12 1039 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 6.3E-32 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS00950 236aa15270e5df401d8da3792aff8b12 1039 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 6.3E-32 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS00950 236aa15270e5df401d8da3792aff8b12 1039 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 6.3E-32 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS00950 236aa15270e5df401d8da3792aff8b12 1039 Pfam PF00873 AcrB/AcrD/AcrF family 5 1032 2.0E-245 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS00950 236aa15270e5df401d8da3792aff8b12 1039 PANTHER PTHR32063 2 1039 0.0 T 21-04-2016 VFU_RS00950 236aa15270e5df401d8da3792aff8b12 1039 SUPERFAMILY SSF82693 138 184 9.42E-22 T 21-04-2016 VFU_RS00950 236aa15270e5df401d8da3792aff8b12 1039 SUPERFAMILY SSF82693 271 328 9.42E-22 T 21-04-2016 VFU_RS00950 236aa15270e5df401d8da3792aff8b12 1039 SUPERFAMILY SSF82866 799 1036 1.11E-47 T 21-04-2016 VFU_RS00950 236aa15270e5df401d8da3792aff8b12 1039 SUPERFAMILY SSF82714 185 269 5.36E-16 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VFU_RS00950 236aa15270e5df401d8da3792aff8b12 1039 Gene3D G3DSA:1.10.3850.10 278 500 6.8E-67 T 21-04-2016 VFU_RS00950 236aa15270e5df401d8da3792aff8b12 1039 Gene3D G3DSA:1.10.3850.10 806 1035 9.9E-52 T 21-04-2016 VFU_RS00950 236aa15270e5df401d8da3792aff8b12 1039 SUPERFAMILY SSF82714 716 800 6.67E-19 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VFU_RS00950 236aa15270e5df401d8da3792aff8b12 1039 PANTHER PTHR32063:SF19 2 1039 0.0 T 21-04-2016 VFU_RS00950 236aa15270e5df401d8da3792aff8b12 1039 Gene3D G3DSA:3.30.2090.10 717 800 7.7E-20 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VFU_RS00950 236aa15270e5df401d8da3792aff8b12 1039 Gene3D G3DSA:3.30.2090.10 185 269 8.2E-17 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VFU_RS00950 236aa15270e5df401d8da3792aff8b12 1039 Gene3D G3DSA:3.30.70.1430 46 142 1.0E-24 T 21-04-2016 VFU_RS00950 236aa15270e5df401d8da3792aff8b12 1039 SUPERFAMILY SSF82866 294 498 1.96E-43 T 21-04-2016 VFU_RS10665 2b4938a9a21d78e53f08d66cf9569e50 562 SUPERFAMILY SSF51735 268 559 1.31E-95 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS10665 2b4938a9a21d78e53f08d66cf9569e50 562 Pfam PF03949 Malic enzyme, NAD binding domain 268 528 3.1E-105 T 21-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 VFU_RS10665 2b4938a9a21d78e53f08d66cf9569e50 562 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 1 562 72.302 T 21-04-2016 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38 VFU_RS10665 2b4938a9a21d78e53f08d66cf9569e50 562 PIRSF PIRSF000106 2 560 1.1E-226 T 21-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 VFU_RS10665 2b4938a9a21d78e53f08d66cf9569e50 562 PANTHER PTHR23406:SF25 1 562 0.0 T 21-04-2016 VFU_RS10665 2b4938a9a21d78e53f08d66cf9569e50 562 Gene3D G3DSA:3.40.50.720 266 559 2.9E-110 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS10665 2b4938a9a21d78e53f08d66cf9569e50 562 SMART SM00919 268 528 6.7E-134 T 21-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 VFU_RS10665 2b4938a9a21d78e53f08d66cf9569e50 562 Pfam PF00390 Malic enzyme, N-terminal domain 78 258 1.3E-77 T 21-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VFU_RS10665 2b4938a9a21d78e53f08d66cf9569e50 562 SUPERFAMILY SSF53223 4 267 7.91E-109 T 21-04-2016 VFU_RS10665 2b4938a9a21d78e53f08d66cf9569e50 562 PANTHER PTHR23406 1 562 0.0 T 21-04-2016 VFU_RS10665 2b4938a9a21d78e53f08d66cf9569e50 562 ProSitePatterns PS00331 Malic enzymes signature. 264 280 - T 21-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 VFU_RS10665 2b4938a9a21d78e53f08d66cf9569e50 562 PRINTS PR00072 Malic enzyme signature 264 280 2.1E-72 T 21-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 VFU_RS10665 2b4938a9a21d78e53f08d66cf9569e50 562 PRINTS PR00072 Malic enzyme signature 144 173 2.1E-72 T 21-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 VFU_RS10665 2b4938a9a21d78e53f08d66cf9569e50 562 PRINTS PR00072 Malic enzyme signature 295 311 2.1E-72 T 21-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 VFU_RS10665 2b4938a9a21d78e53f08d66cf9569e50 562 PRINTS PR00072 Malic enzyme signature 405 421 2.1E-72 T 21-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 VFU_RS10665 2b4938a9a21d78e53f08d66cf9569e50 562 PRINTS PR00072 Malic enzyme signature 239 257 2.1E-72 T 21-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 VFU_RS10665 2b4938a9a21d78e53f08d66cf9569e50 562 PRINTS PR00072 Malic enzyme signature 84 108 2.1E-72 T 21-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 VFU_RS10665 2b4938a9a21d78e53f08d66cf9569e50 562 PRINTS PR00072 Malic enzyme signature 180 202 2.1E-72 T 21-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 VFU_RS10665 2b4938a9a21d78e53f08d66cf9569e50 562 Gene3D G3DSA:3.40.50.10380 14 265 3.0E-115 T 21-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VFU_RS10665 2b4938a9a21d78e53f08d66cf9569e50 562 SMART SM01274 78 258 1.7E-105 T 21-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VFU_RS06175 8a6328345d805e62fad4a8ee32ac20fc 1117 Gene3D G3DSA:1.10.10.60 1007 1064 4.0E-10 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS06175 8a6328345d805e62fad4a8ee32ac20fc 1117 Pfam PF07494 Two component regulator propeller 286 308 0.0057 T 21-04-2016 IPR011110 Two component regulator propeller VFU_RS06175 8a6328345d805e62fad4a8ee32ac20fc 1117 Gene3D G3DSA:1.10.10.60 1065 1109 1.9E-14 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS06175 8a6328345d805e62fad4a8ee32ac20fc 1117 SUPERFAMILY SSF46689 1064 1111 2.8E-11 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS06175 8a6328345d805e62fad4a8ee32ac20fc 1117 SMART SM00342 1028 1110 1.6E-29 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VFU_RS06175 8a6328345d805e62fad4a8ee32ac20fc 1117 SUPERFAMILY SSF63829 561 583 9.59E-6 T 21-04-2016 VFU_RS06175 8a6328345d805e62fad4a8ee32ac20fc 1117 SUPERFAMILY SSF63829 259 333 9.59E-6 T 21-04-2016 VFU_RS06175 8a6328345d805e62fad4a8ee32ac20fc 1117 SUPERFAMILY SSF63829 423 520 9.59E-6 T 21-04-2016 VFU_RS06175 8a6328345d805e62fad4a8ee32ac20fc 1117 Gene3D G3DSA:2.130.10.10 368 369 3.1E-5 T 21-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 VFU_RS06175 8a6328345d805e62fad4a8ee32ac20fc 1117 Gene3D G3DSA:2.130.10.10 439 489 3.1E-5 T 21-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 VFU_RS06175 8a6328345d805e62fad4a8ee32ac20fc 1117 Gene3D G3DSA:2.130.10.10 176 331 3.1E-5 T 21-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 VFU_RS06175 8a6328345d805e62fad4a8ee32ac20fc 1117 PANTHER PTHR11019:SF112 1008 1117 6.0E-26 T 21-04-2016 VFU_RS06175 8a6328345d805e62fad4a8ee32ac20fc 1117 Pfam PF12833 Helix-turn-helix domain 1035 1110 1.2E-22 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VFU_RS06175 8a6328345d805e62fad4a8ee32ac20fc 1117 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 1094 1110 5.0E-5 T 21-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VFU_RS06175 8a6328345d805e62fad4a8ee32ac20fc 1117 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 1079 1094 5.0E-5 T 21-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VFU_RS06175 8a6328345d805e62fad4a8ee32ac20fc 1117 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 1065 1106 - T 21-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VFU_RS06175 8a6328345d805e62fad4a8ee32ac20fc 1117 PANTHER PTHR11019 1008 1117 6.0E-26 T 21-04-2016 VFU_RS05580 5daf0d81a9408741da71b40740d0d843 377 Pfam PF07196 Flagellin hook IN motif 196 249 4.8E-12 T 21-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VFU_RS05580 5daf0d81a9408741da71b40740d0d843 377 PANTHER PTHR30244 2 376 2.7E-165 T 21-04-2016 VFU_RS05580 5daf0d81a9408741da71b40740d0d843 377 SUPERFAMILY SSF64518 1 376 5.23E-95 T 21-04-2016 VFU_RS05580 5daf0d81a9408741da71b40740d0d843 377 PANTHER PTHR30244:SF1 2 376 2.7E-165 T 21-04-2016 VFU_RS05580 5daf0d81a9408741da71b40740d0d843 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 6.7E-25 T 21-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VFU_RS05580 5daf0d81a9408741da71b40740d0d843 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 6.2E-42 T 21-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VFU_RS05580 5daf0d81a9408741da71b40740d0d843 377 Gene3D G3DSA:1.20.1330.10 55 171 8.2E-60 T 21-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VFU_RS05580 5daf0d81a9408741da71b40740d0d843 377 Gene3D G3DSA:1.20.1330.10 279 332 8.2E-60 T 21-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VFU_RS05580 5daf0d81a9408741da71b40740d0d843 377 PRINTS PR00207 Flagellin signature 111 134 8.99E-28 T 21-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VFU_RS05580 5daf0d81a9408741da71b40740d0d843 377 PRINTS PR00207 Flagellin signature 76 95 8.99E-28 T 21-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VFU_RS05580 5daf0d81a9408741da71b40740d0d843 377 PRINTS PR00207 Flagellin signature 37 54 8.99E-28 T 21-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VFU_RS09745 0c271772dd910c583ae2745e79f61b76 328 PANTHER PTHR30024:SF1 33 299 1.9E-49 T 21-04-2016 VFU_RS09745 0c271772dd910c583ae2745e79f61b76 328 Gene3D G3DSA:3.40.190.10 115 205 1.6E-14 T 21-04-2016 VFU_RS09745 0c271772dd910c583ae2745e79f61b76 328 Pfam PF09084 NMT1/THI5 like 43 252 5.7E-19 T 21-04-2016 IPR015168 SsuA/THI5-like VFU_RS09745 0c271772dd910c583ae2745e79f61b76 328 PANTHER PTHR30024 33 299 1.9E-49 T 21-04-2016 VFU_RS09745 0c271772dd910c583ae2745e79f61b76 328 SUPERFAMILY SSF53850 31 253 9.37E-33 T 21-04-2016 VFU_RS15365 172c44b6db02fe4c0a08641ec7d7996e 75 SUPERFAMILY SSF46911 3 74 2.49E-29 T 21-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS15365 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.6E-18 T 21-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS15365 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.6E-18 T 21-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS15365 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.6E-18 T 21-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS15365 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.6E-18 T 21-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS15365 172c44b6db02fe4c0a08641ec7d7996e 75 Pfam PF01084 Ribosomal protein S18 19 68 2.4E-25 T 21-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS15365 172c44b6db02fe4c0a08641ec7d7996e 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 73 9.0E-24 T 21-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS15365 172c44b6db02fe4c0a08641ec7d7996e 75 Gene3D G3DSA:4.10.640.10 8 74 5.2E-33 T 21-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS15365 172c44b6db02fe4c0a08641ec7d7996e 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 21-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS15365 172c44b6db02fe4c0a08641ec7d7996e 75 PANTHER PTHR13479 2 74 2.1E-35 T 21-04-2016 VFU_RS15365 172c44b6db02fe4c0a08641ec7d7996e 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 73 6.2E-38 T 21-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS15365 172c44b6db02fe4c0a08641ec7d7996e 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.42 T 21-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS03685 8d7074435c9dc8639dce45760c59b925 246 SUPERFAMILY SSF69593 7 236 2.22E-55 T 21-04-2016 VFU_RS03685 8d7074435c9dc8639dce45760c59b925 246 Gene3D G3DSA:3.40.1130.10 46 237 1.1E-17 T 21-04-2016 VFU_RS03685 8d7074435c9dc8639dce45760c59b925 246 SMART SM00563 67 182 8.8E-42 T 21-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VFU_RS03685 8d7074435c9dc8639dce45760c59b925 246 PANTHER PTHR10434:SF20 1 240 1.6E-156 T 21-04-2016 VFU_RS03685 8d7074435c9dc8639dce45760c59b925 246 PANTHER PTHR10434 1 240 1.6E-156 T 21-04-2016 VFU_RS03685 8d7074435c9dc8639dce45760c59b925 246 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 2.8E-43 T 21-04-2016 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|Reactome: REACT_22258|UniPathway: UPA00557 VFU_RS03685 8d7074435c9dc8639dce45760c59b925 246 Pfam PF01553 Acyltransferase 60 180 1.2E-31 T 21-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VFU_RS09025 3cd1549877c42c5baba7ea9e5a5e36fe 455 PANTHER PTHR30625:SF0 10 442 7.1E-147 T 21-04-2016 VFU_RS09025 3cd1549877c42c5baba7ea9e5a5e36fe 455 Pfam PF01618 MotA/TolQ/ExbB proton channel family 308 427 2.2E-30 T 21-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 VFU_RS09025 3cd1549877c42c5baba7ea9e5a5e36fe 455 PIRSF PIRSF037714 1 450 2.3E-155 T 21-04-2016 IPR017270 Putative MotA/TolQ/ExbB family protein VFU_RS09025 3cd1549877c42c5baba7ea9e5a5e36fe 455 PANTHER PTHR30625 10 442 7.1E-147 T 21-04-2016 VFU_RS00355 3b5b70734854ff9ff613cebd8d65194d 419 Gene3D G3DSA:2.40.50.140 49 117 2.8E-36 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS00355 3b5b70734854ff9ff613cebd8d65194d 419 Gene3D G3DSA:1.10.720.10 1 47 1.3E-21 T 21-04-2016 VFU_RS00355 3b5b70734854ff9ff613cebd8d65194d 419 PANTHER PTHR15184:SF34 54 141 2.0E-199 T 21-04-2016 VFU_RS00355 3b5b70734854ff9ff613cebd8d65194d 419 PANTHER PTHR15184:SF34 160 418 2.0E-199 T 21-04-2016 VFU_RS00355 3b5b70734854ff9ff613cebd8d65194d 419 SUPERFAMILY SSF50249 48 125 4.4E-29 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS00355 3b5b70734854ff9ff613cebd8d65194d 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 3.2E-32 T 21-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 VFU_RS00355 3b5b70734854ff9ff613cebd8d65194d 419 SMART SM00357 52 118 1.2E-17 T 21-04-2016 IPR011129 Cold shock protein GO:0003676 VFU_RS00355 3b5b70734854ff9ff613cebd8d65194d 419 SMART SM00382 170 355 8.9E-9 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS00355 3b5b70734854ff9ff613cebd8d65194d 419 PANTHER PTHR15184 54 141 2.0E-199 T 21-04-2016 VFU_RS00355 3b5b70734854ff9ff613cebd8d65194d 419 PANTHER PTHR15184 160 418 2.0E-199 T 21-04-2016 VFU_RS00355 3b5b70734854ff9ff613cebd8d65194d 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 252.044 T 21-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 VFU_RS00355 3b5b70734854ff9ff613cebd8d65194d 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 1.4E-16 T 21-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 VFU_RS00355 3b5b70734854ff9ff613cebd8d65194d 419 Gene3D G3DSA:3.40.50.300 132 418 4.0E-107 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS00355 3b5b70734854ff9ff613cebd8d65194d 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 4.8E-220 T 21-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 VFU_RS00355 3b5b70734854ff9ff613cebd8d65194d 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 3.7E-23 T 21-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VFU_RS00355 3b5b70734854ff9ff613cebd8d65194d 419 SUPERFAMILY SSF52540 90 371 1.95E-68 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS00355 3b5b70734854ff9ff613cebd8d65194d 419 SMART SM00959 5 47 2.0E-17 T 21-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 VFU_RS00355 3b5b70734854ff9ff613cebd8d65194d 419 SUPERFAMILY SSF68912 1 46 8.24E-12 T 21-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 VFU_RS15055 dd79d0dd74e137634d86f6c88d18254f 322 SUPERFAMILY SSF53850 25 321 9.72E-88 T 21-04-2016 VFU_RS15055 dd79d0dd74e137634d86f6c88d18254f 322 Gene3D G3DSA:3.40.190.10 25 108 1.4E-66 T 21-04-2016 VFU_RS15055 dd79d0dd74e137634d86f6c88d18254f 322 Gene3D G3DSA:3.40.190.10 251 320 1.4E-66 T 21-04-2016 VFU_RS15055 dd79d0dd74e137634d86f6c88d18254f 322 PANTHER PTHR30024:SF13 1 322 8.4E-121 T 21-04-2016 VFU_RS15055 dd79d0dd74e137634d86f6c88d18254f 322 Pfam PF16868 NMT1-like family 30 319 2.3E-96 T 21-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family VFU_RS15055 dd79d0dd74e137634d86f6c88d18254f 322 Gene3D G3DSA:3.40.190.10 118 250 1.3E-34 T 21-04-2016 VFU_RS15055 dd79d0dd74e137634d86f6c88d18254f 322 PANTHER PTHR30024 1 322 8.4E-121 T 21-04-2016 VFU_RS15055 dd79d0dd74e137634d86f6c88d18254f 322 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 10 319 9.2E-113 T 21-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family VFU_RS10485 a8cfc74606964c69dfc27fcf9b90eb0d 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 415 428 1.6E-10 T 21-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS10485 a8cfc74606964c69dfc27fcf9b90eb0d 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 544 552 1.6E-10 T 21-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS10485 a8cfc74606964c69dfc27fcf9b90eb0d 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 492 504 1.6E-10 T 21-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS10485 a8cfc74606964c69dfc27fcf9b90eb0d 787 ProSitePatterns PS00116 DNA polymerase family B signature. 546 554 - T 21-04-2016 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS10485 a8cfc74606964c69dfc27fcf9b90eb0d 787 SUPERFAMILY SSF56672 385 780 6.67E-112 T 21-04-2016 VFU_RS10485 a8cfc74606964c69dfc27fcf9b90eb0d 787 Pfam PF00136 DNA polymerase family B 377 737 1.7E-40 T 21-04-2016 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS10485 a8cfc74606964c69dfc27fcf9b90eb0d 787 PANTHER PTHR10322 105 787 1.1E-168 T 21-04-2016 VFU_RS10485 a8cfc74606964c69dfc27fcf9b90eb0d 787 SMART SM00486 153 558 5.6E-66 T 21-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS10485 a8cfc74606964c69dfc27fcf9b90eb0d 787 Gene3D G3DSA:3.90.1600.10 515 629 2.0E-10 T 21-04-2016 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS10485 a8cfc74606964c69dfc27fcf9b90eb0d 787 Gene3D G3DSA:3.90.1600.10 401 431 2.0E-10 T 21-04-2016 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS10485 a8cfc74606964c69dfc27fcf9b90eb0d 787 Gene3D G3DSA:3.30.420.10 153 365 1.9E-39 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VFU_RS10485 a8cfc74606964c69dfc27fcf9b90eb0d 787 Pfam PF03104 DNA polymerase family B, exonuclease domain 192 296 7.6E-14 T 21-04-2016 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS10485 a8cfc74606964c69dfc27fcf9b90eb0d 787 SUPERFAMILY SSF53098 4 389 7.59E-86 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VFU_RS06360 adce212f7e1897c393c99ef927a58fd1 317 Pfam PF03547 Membrane transport protein 164 306 1.9E-8 T 21-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 VFU_RS06360 adce212f7e1897c393c99ef927a58fd1 317 Pfam PF03547 Membrane transport protein 4 136 2.6E-9 T 21-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 VFU_RS06360 adce212f7e1897c393c99ef927a58fd1 317 PANTHER PTHR36838 1 313 3.9E-31 T 21-04-2016 VFU_RS11135 1a45db5ce2b53d0297462495f93836e9 151 SUPERFAMILY SSF54427 7 148 7.51E-33 T 21-04-2016 IPR032710 NTF2-like domain VFU_RS11135 1a45db5ce2b53d0297462495f93836e9 151 Pfam PF13577 SnoaL-like domain 11 139 2.2E-27 T 21-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain VFU_RS11135 1a45db5ce2b53d0297462495f93836e9 151 Gene3D G3DSA:3.10.450.50 12 149 4.7E-33 T 21-04-2016 IPR032710 NTF2-like domain VFU_RS07795 a867ebc6acd50808d51f5cef089b3148 434 Gene3D G3DSA:3.40.1190.20 337 434 3.2E-44 T 21-04-2016 IPR029056 Ribokinase-like VFU_RS07795 a867ebc6acd50808d51f5cef089b3148 434 Gene3D G3DSA:3.40.1190.20 96 298 3.2E-44 T 21-04-2016 IPR029056 Ribokinase-like VFU_RS07795 a867ebc6acd50808d51f5cef089b3148 434 PANTHER PTHR10584:SF202 17 293 2.0E-253 T 21-04-2016 VFU_RS07795 a867ebc6acd50808d51f5cef089b3148 434 PANTHER PTHR10584:SF202 332 376 2.0E-253 T 21-04-2016 VFU_RS07795 a867ebc6acd50808d51f5cef089b3148 434 PANTHER PTHR10584:SF202 393 434 2.0E-253 T 21-04-2016 VFU_RS07795 a867ebc6acd50808d51f5cef089b3148 434 SUPERFAMILY SSF53613 338 416 4.83E-44 T 21-04-2016 IPR029056 Ribokinase-like VFU_RS07795 a867ebc6acd50808d51f5cef089b3148 434 SUPERFAMILY SSF53613 31 305 4.83E-44 T 21-04-2016 IPR029056 Ribokinase-like VFU_RS07795 a867ebc6acd50808d51f5cef089b3148 434 Pfam PF00294 pfkB family carbohydrate kinase 77 294 2.8E-11 T 21-04-2016 IPR011611 Carbohydrate kinase PfkB VFU_RS07795 a867ebc6acd50808d51f5cef089b3148 434 Gene3D G3DSA:3.30.1110.10 45 95 1.2E-5 T 21-04-2016 VFU_RS07795 a867ebc6acd50808d51f5cef089b3148 434 PANTHER PTHR10584 17 293 2.0E-253 T 21-04-2016 VFU_RS07795 a867ebc6acd50808d51f5cef089b3148 434 PANTHER PTHR10584 332 376 2.0E-253 T 21-04-2016 VFU_RS07795 a867ebc6acd50808d51f5cef089b3148 434 PANTHER PTHR10584 393 434 2.0E-253 T 21-04-2016 VFU_RS06120 52111804f735cf4e2cadd03539b0d2ee 130 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 9 128 1.5E-38 T 21-04-2016 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 UniPathway: UPA00223 VFU_RS06120 52111804f735cf4e2cadd03539b0d2ee 130 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 86 99 - T 21-04-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 VFU_RS06120 52111804f735cf4e2cadd03539b0d2ee 130 PANTHER PTHR10978:SF4 6 130 1.2E-71 T 21-04-2016 VFU_RS06120 52111804f735cf4e2cadd03539b0d2ee 130 SUPERFAMILY SSF81343 8 130 1.05E-32 T 21-04-2016 VFU_RS06120 52111804f735cf4e2cadd03539b0d2ee 130 PIRSF PIRSF000178 2 130 6.4E-31 T 21-04-2016 VFU_RS06120 52111804f735cf4e2cadd03539b0d2ee 130 Gene3D G3DSA:1.20.1300.10 6 130 5.6E-40 T 21-04-2016 VFU_RS06120 52111804f735cf4e2cadd03539b0d2ee 130 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 8 124 4.3E-26 T 21-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 VFU_RS06120 52111804f735cf4e2cadd03539b0d2ee 130 PANTHER PTHR10978 6 130 1.2E-71 T 21-04-2016 VFU_RS02790 3d1429e9435f5489303771f61ec3ffdc 336 PANTHER PTHR11405:SF44 298 336 1.7E-204 T 21-04-2016 VFU_RS02790 3d1429e9435f5489303771f61ec3ffdc 336 PANTHER PTHR11405:SF44 1 277 1.7E-204 T 21-04-2016 VFU_RS02790 3d1429e9435f5489303771f61ec3ffdc 336 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 334 2.7E-131 T 21-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VFU_RS02790 3d1429e9435f5489303771f61ec3ffdc 336 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 157 332 1.5E-55 T 21-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 VFU_RS02790 3d1429e9435f5489303771f61ec3ffdc 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 230 240 3.98E-32 T 21-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VFU_RS02790 3d1429e9435f5489303771f61ec3ffdc 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 3.98E-32 T 21-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VFU_RS02790 3d1429e9435f5489303771f61ec3ffdc 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 3.98E-32 T 21-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VFU_RS02790 3d1429e9435f5489303771f61ec3ffdc 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 3.98E-32 T 21-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VFU_RS02790 3d1429e9435f5489303771f61ec3ffdc 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 313 324 3.98E-32 T 21-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VFU_RS02790 3d1429e9435f5489303771f61ec3ffdc 336 PANTHER PTHR11405 298 336 1.7E-204 T 21-04-2016 VFU_RS02790 3d1429e9435f5489303771f61ec3ffdc 336 PANTHER PTHR11405 1 277 1.7E-204 T 21-04-2016 VFU_RS02790 3d1429e9435f5489303771f61ec3ffdc 336 SUPERFAMILY SSF53671 4 335 5.63E-99 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VFU_RS02790 3d1429e9435f5489303771f61ec3ffdc 336 Gene3D G3DSA:3.40.50.1370 5 144 2.9E-55 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VFU_RS02790 3d1429e9435f5489303771f61ec3ffdc 336 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 335 82.625 T 21-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VFU_RS02790 3d1429e9435f5489303771f61ec3ffdc 336 Gene3D G3DSA:3.40.50.1370 145 321 7.7E-72 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VFU_RS02790 3d1429e9435f5489303771f61ec3ffdc 336 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VFU_RS02790 3d1429e9435f5489303771f61ec3ffdc 336 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 1.5E-45 T 21-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 VFU_RS02790 3d1429e9435f5489303771f61ec3ffdc 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 3.42E-24 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VFU_RS02790 3d1429e9435f5489303771f61ec3ffdc 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 299 322 3.42E-24 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VFU_RS02790 3d1429e9435f5489303771f61ec3ffdc 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 3.42E-24 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VFU_RS02790 3d1429e9435f5489303771f61ec3ffdc 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 3.42E-24 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VFU_RS14990 2633593a863474fc4bcc6cc09fec5760 271 PANTHER PTHR11727 8 266 6.9E-100 T 21-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm VFU_RS14990 2633593a863474fc4bcc6cc09fec5760 271 Gene3D G3DSA:1.10.8.100 201 263 7.0E-23 T 21-04-2016 IPR023165 rRNA adenine dimethylase-like VFU_RS14990 2633593a863474fc4bcc6cc09fec5760 271 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 21-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 VFU_RS14990 2633593a863474fc4bcc6cc09fec5760 271 Gene3D G3DSA:3.40.50.150 8 197 1.4E-68 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS14990 2633593a863474fc4bcc6cc09fec5760 271 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 264 8.7E-76 T 21-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm VFU_RS14990 2633593a863474fc4bcc6cc09fec5760 271 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 264 54.971 T 21-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 VFU_RS14990 2633593a863474fc4bcc6cc09fec5760 271 SUPERFAMILY SSF53335 8 264 1.15E-79 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS14990 2633593a863474fc4bcc6cc09fec5760 271 SMART SM00650 25 197 2.5E-89 T 21-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 VFU_RS14990 2633593a863474fc4bcc6cc09fec5760 271 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 10 263 2.1E-86 T 21-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 VFU_RS00495 d035347f8fd039d61c6dda09b050a16e 414 SUPERFAMILY SSF50182 187 252 3.92E-11 T 21-04-2016 IPR010920 LSM domain VFU_RS00495 d035347f8fd039d61c6dda09b050a16e 414 PANTHER PTHR30414 1 414 6.6E-197 T 21-04-2016 VFU_RS00495 d035347f8fd039d61c6dda09b050a16e 414 Pfam PF00924 Mechanosensitive ion channel 144 397 8.0E-49 T 21-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VFU_RS00495 d035347f8fd039d61c6dda09b050a16e 414 Gene3D G3DSA:2.30.30.60 203 252 1.9E-8 T 21-04-2016 VFU_RS00495 d035347f8fd039d61c6dda09b050a16e 414 PANTHER PTHR30414:SF0 1 414 6.6E-197 T 21-04-2016 IPR030192 Miniconductance mechanosensitive channel YbdG GO:0008381|GO:0016021|GO:0071470 VFU_RS11320 75c86caa215997304e4622188fd8cf6d 157 SUPERFAMILY SSF52728 3 156 7.85E-51 T 21-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 VFU_RS11320 75c86caa215997304e4622188fd8cf6d 157 Gene3D G3DSA:3.40.35.10 3 157 1.6E-57 T 21-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 VFU_RS11320 75c86caa215997304e4622188fd8cf6d 157 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 3 151 1.8E-66 T 21-04-2016 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 VFU_RS11320 75c86caa215997304e4622188fd8cf6d 157 Pfam PF03830 PTS system sorbose subfamily IIB component 4 149 2.3E-50 T 21-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 VFU_RS11320 75c86caa215997304e4622188fd8cf6d 157 PANTHER PTHR33799 1 157 1.4E-91 T 21-04-2016 VFU_RS11320 75c86caa215997304e4622188fd8cf6d 157 PANTHER PTHR33799:SF6 1 157 1.4E-91 T 21-04-2016 VFU_RS05835 ea2df0f56761e15a6c8b06fcff3597ff 387 Pfam PF00288 GHMP kinases N terminal domain 116 182 2.2E-10 T 21-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 VFU_RS05835 ea2df0f56761e15a6c8b06fcff3597ff 387 TIGRFAM TIGR00131 gal_kin: galactokinase 6 381 9.0E-148 T 21-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VFU_RS05835 ea2df0f56761e15a6c8b06fcff3597ff 387 Gene3D G3DSA:3.30.230.10 5 208 1.1E-76 T 21-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VFU_RS05835 ea2df0f56761e15a6c8b06fcff3597ff 387 PANTHER PTHR10457:SF6 3 387 2.4E-145 T 21-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VFU_RS05835 ea2df0f56761e15a6c8b06fcff3597ff 387 SUPERFAMILY SSF55060 205 382 5.28E-52 T 21-04-2016 IPR013750 GHMP kinase, C-terminal domain VFU_RS05835 ea2df0f56761e15a6c8b06fcff3597ff 387 PRINTS PR00473 Galactokinase signature 93 104 9.9E-30 T 21-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VFU_RS05835 ea2df0f56761e15a6c8b06fcff3597ff 387 PRINTS PR00473 Galactokinase signature 264 278 9.9E-30 T 21-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VFU_RS05835 ea2df0f56761e15a6c8b06fcff3597ff 387 PRINTS PR00473 Galactokinase signature 28 46 9.9E-30 T 21-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VFU_RS05835 ea2df0f56761e15a6c8b06fcff3597ff 387 PRINTS PR00473 Galactokinase signature 113 131 9.9E-30 T 21-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VFU_RS05835 ea2df0f56761e15a6c8b06fcff3597ff 387 PIRSF PIRSF000530 1 385 4.1E-126 T 21-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VFU_RS05835 ea2df0f56761e15a6c8b06fcff3597ff 387 Hamap MF_00246 Galactokinase [galK]. 26 382 43.99 T 21-04-2016 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VFU_RS05835 ea2df0f56761e15a6c8b06fcff3597ff 387 Pfam PF08544 GHMP kinases C terminal 280 353 8.6E-9 T 21-04-2016 IPR013750 GHMP kinase, C-terminal domain VFU_RS05835 ea2df0f56761e15a6c8b06fcff3597ff 387 PRINTS PR00959 Mevalonate kinase family signature 26 50 5.5E-44 T 21-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VFU_RS05835 ea2df0f56761e15a6c8b06fcff3597ff 387 PRINTS PR00959 Mevalonate kinase family signature 120 142 5.5E-44 T 21-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VFU_RS05835 ea2df0f56761e15a6c8b06fcff3597ff 387 PRINTS PR00959 Mevalonate kinase family signature 163 182 5.5E-44 T 21-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VFU_RS05835 ea2df0f56761e15a6c8b06fcff3597ff 387 PRINTS PR00959 Mevalonate kinase family signature 329 346 5.5E-44 T 21-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VFU_RS05835 ea2df0f56761e15a6c8b06fcff3597ff 387 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 122 133 - T 21-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 VFU_RS05835 ea2df0f56761e15a6c8b06fcff3597ff 387 PANTHER PTHR10457 3 387 2.4E-145 T 21-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VFU_RS05835 ea2df0f56761e15a6c8b06fcff3597ff 387 Gene3D G3DSA:3.30.70.890 209 381 8.9E-61 T 21-04-2016 IPR013750 GHMP kinase, C-terminal domain VFU_RS05835 ea2df0f56761e15a6c8b06fcff3597ff 387 SUPERFAMILY SSF54211 2 204 3.04E-63 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VFU_RS05835 ea2df0f56761e15a6c8b06fcff3597ff 387 ProSitePatterns PS00106 Galactokinase signature. 28 39 - T 21-04-2016 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VFU_RS05835 ea2df0f56761e15a6c8b06fcff3597ff 387 Pfam PF10509 Galactokinase galactose-binding signature 11 59 1.7E-21 T 21-04-2016 IPR019539 Galactokinase galactose-binding domain KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VFU_RS11690 a611b32a21d1fe1b6231b4e7619233b7 530 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 530 377.824 T 21-04-2016 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 VFU_RS11690 a611b32a21d1fe1b6231b4e7619233b7 530 PANTHER PTHR10283 12 168 6.7E-275 T 21-04-2016 VFU_RS11690 a611b32a21d1fe1b6231b4e7619233b7 530 PANTHER PTHR10283 198 519 6.7E-275 T 21-04-2016 VFU_RS11690 a611b32a21d1fe1b6231b4e7619233b7 530 PANTHER PTHR10283:SF93 12 168 6.7E-275 T 21-04-2016 VFU_RS11690 a611b32a21d1fe1b6231b4e7619233b7 530 PANTHER PTHR10283:SF93 198 519 6.7E-275 T 21-04-2016 VFU_RS11690 a611b32a21d1fe1b6231b4e7619233b7 530 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 516 2.9E-304 T 21-04-2016 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 VFU_RS11690 a611b32a21d1fe1b6231b4e7619233b7 530 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 515 6.9E-297 T 21-04-2016 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 VFU_RS07340 94315b52cb3e50a7d6ed807020a6a7a6 231 PANTHER PTHR13903 1 231 3.7E-98 T 21-04-2016 IPR012093 Pirin VFU_RS07340 94315b52cb3e50a7d6ed807020a6a7a6 231 Pfam PF02678 Pirin 7 119 1.1E-32 T 21-04-2016 IPR003829 Pirin, N-terminal domain VFU_RS07340 94315b52cb3e50a7d6ed807020a6a7a6 231 PIRSF PIRSF006232 1 229 8.6E-53 T 21-04-2016 IPR012093 Pirin VFU_RS07340 94315b52cb3e50a7d6ed807020a6a7a6 231 PANTHER PTHR13903:SF7 1 231 3.7E-98 T 21-04-2016 VFU_RS07340 94315b52cb3e50a7d6ed807020a6a7a6 231 Gene3D G3DSA:2.60.120.10 3 230 2.5E-66 T 21-04-2016 IPR014710 RmlC-like jelly roll fold VFU_RS07340 94315b52cb3e50a7d6ed807020a6a7a6 231 SUPERFAMILY SSF51182 1 230 6.62E-70 T 21-04-2016 IPR011051 RmlC-like cupin domain VFU_RS07370 6bc71d81dea2c2741a9a238f69c6bf64 317 Gene3D G3DSA:1.10.3720.10 97 306 4.1E-16 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS07370 6bc71d81dea2c2741a9a238f69c6bf64 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 309 1.4E-35 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS07370 6bc71d81dea2c2741a9a238f69c6bf64 317 PANTHER PTHR30465:SF0 1 310 1.3E-103 T 21-04-2016 VFU_RS07370 6bc71d81dea2c2741a9a238f69c6bf64 317 SUPERFAMILY SSF161098 98 294 6.93E-16 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS07370 6bc71d81dea2c2741a9a238f69c6bf64 317 PANTHER PTHR30465 1 310 1.3E-103 T 21-04-2016 VFU_RS04755 dbe0642823c0fabb8d2e4de02810d614 172 Gene3D G3DSA:3.90.79.10 5 151 4.4E-32 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VFU_RS04755 dbe0642823c0fabb8d2e4de02810d614 172 PRINTS PR00502 NUDIX hydrolase family signature 47 62 3.4E-8 T 21-04-2016 IPR020476 NUDIX hydrolase VFU_RS04755 dbe0642823c0fabb8d2e4de02810d614 172 PRINTS PR00502 NUDIX hydrolase family signature 33 47 3.4E-8 T 21-04-2016 IPR020476 NUDIX hydrolase VFU_RS04755 dbe0642823c0fabb8d2e4de02810d614 172 SUPERFAMILY SSF55811 6 152 8.67E-32 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VFU_RS04755 dbe0642823c0fabb8d2e4de02810d614 172 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.489 T 21-04-2016 IPR022927 RNA pyrophosphohydrolase RppH VFU_RS04755 dbe0642823c0fabb8d2e4de02810d614 172 Pfam PF00293 NUDIX domain 7 145 1.7E-26 T 21-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 VFU_RS04755 dbe0642823c0fabb8d2e4de02810d614 172 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 21-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VFU_RS04755 dbe0642823c0fabb8d2e4de02810d614 172 PANTHER PTHR23114 1 158 1.6E-64 T 21-04-2016 VFU_RS02390 386f3e89c4cfc72a7603fd4f8bf561e9 179 PANTHER PTHR38683 3 179 1.7E-53 T 21-04-2016 VFU_RS02390 386f3e89c4cfc72a7603fd4f8bf561e9 179 Pfam PF04345 Chorismate lyase 12 179 1.7E-55 T 21-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 VFU_RS02390 386f3e89c4cfc72a7603fd4f8bf561e9 179 SUPERFAMILY SSF64288 8 174 7.42E-44 T 21-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain VFU_RS02390 386f3e89c4cfc72a7603fd4f8bf561e9 179 Gene3D G3DSA:3.40.1410.10 11 174 2.2E-48 T 21-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain VFU_RS02390 386f3e89c4cfc72a7603fd4f8bf561e9 179 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 15 174 23.196 T 21-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 VFU_RS08605 e182d11aeb6b487e8a48b7f300e9fc33 212 PANTHER PTHR26402 5 211 3.5E-78 T 21-04-2016 VFU_RS08605 e182d11aeb6b487e8a48b7f300e9fc33 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VFU_RS08605 e182d11aeb6b487e8a48b7f300e9fc33 212 Gene3D G3DSA:3.40.50.2300 3 156 2.5E-39 T 21-04-2016 VFU_RS08605 e182d11aeb6b487e8a48b7f300e9fc33 212 Gene3D G3DSA:1.10.10.10 157 211 8.8E-23 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS08605 e182d11aeb6b487e8a48b7f300e9fc33 212 SUPERFAMILY SSF52172 4 134 3.13E-35 T 21-04-2016 IPR011006 CheY-like superfamily VFU_RS08605 e182d11aeb6b487e8a48b7f300e9fc33 212 Pfam PF00072 Response regulator receiver domain 7 119 4.5E-30 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS08605 e182d11aeb6b487e8a48b7f300e9fc33 212 SUPERFAMILY SSF46894 140 211 5.44E-21 T 21-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VFU_RS08605 e182d11aeb6b487e8a48b7f300e9fc33 212 SMART SM00421 148 205 2.7E-22 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VFU_RS08605 e182d11aeb6b487e8a48b7f300e9fc33 212 SMART SM00448 5 118 7.4E-32 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS08605 e182d11aeb6b487e8a48b7f300e9fc33 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 205 5.6E-20 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VFU_RS08605 e182d11aeb6b487e8a48b7f300e9fc33 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 2.2E-12 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VFU_RS08605 e182d11aeb6b487e8a48b7f300e9fc33 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 2.2E-12 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VFU_RS08605 e182d11aeb6b487e8a48b7f300e9fc33 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 2.2E-12 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VFU_RS08605 e182d11aeb6b487e8a48b7f300e9fc33 212 PANTHER PTHR26402:SF151 5 211 3.5E-78 T 21-04-2016 VFU_RS11685 aca66354ae12480df92ff85e089493be 279 Gene3D G3DSA:1.20.120.530 80 137 7.4E-69 T 21-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VFU_RS11685 aca66354ae12480df92ff85e089493be 279 Gene3D G3DSA:1.20.120.530 178 278 7.4E-69 T 21-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VFU_RS11685 aca66354ae12480df92ff85e089493be 279 PANTHER PTHR11751 13 97 1.3E-54 T 21-04-2016 VFU_RS11685 aca66354ae12480df92ff85e089493be 279 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 71 3.0E-20 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VFU_RS11685 aca66354ae12480df92ff85e089493be 279 SUPERFAMILY SSF46785 12 74 8.1E-17 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS11685 aca66354ae12480df92ff85e089493be 279 Gene3D G3DSA:1.10.10.10 12 74 5.2E-21 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS11685 aca66354ae12480df92ff85e089493be 279 SMART SM00345 12 71 1.6E-22 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VFU_RS11685 aca66354ae12480df92ff85e089493be 279 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 279 139.538 T 21-04-2016 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 VFU_RS11685 aca66354ae12480df92ff85e089493be 279 SUPERFAMILY SSF48008 178 270 1.31E-57 T 21-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VFU_RS11685 aca66354ae12480df92ff85e089493be 279 SUPERFAMILY SSF48008 79 137 1.31E-57 T 21-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VFU_RS11685 aca66354ae12480df92ff85e089493be 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 3.5E-9 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VFU_RS11685 aca66354ae12480df92ff85e089493be 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 3.5E-9 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VFU_RS11685 aca66354ae12480df92ff85e089493be 279 Pfam PF07840 FadR C-terminal domain 72 274 3.6E-68 T 21-04-2016 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 VFU_RS11685 aca66354ae12480df92ff85e089493be 279 PANTHER PTHR11751:SF402 13 97 1.3E-54 T 21-04-2016 VFU_RS11685 aca66354ae12480df92ff85e089493be 279 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 276 6.0E-118 T 21-04-2016 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 VFU_RS02285 b709bcb137abedd47bc03222e407bd4a 408 PANTHER PTHR33525:SF4 3 373 2.9E-145 T 21-04-2016 VFU_RS02285 b709bcb137abedd47bc03222e407bd4a 408 SUPERFAMILY SSF109604 185 404 2.07E-41 T 21-04-2016 VFU_RS02285 b709bcb137abedd47bc03222e407bd4a 408 PIRSF PIRSF003180 1 408 1.6E-167 T 21-04-2016 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing VFU_RS02285 b709bcb137abedd47bc03222e407bd4a 408 Gene3D G3DSA:1.10.3150.10 187 352 3.0E-32 T 21-04-2016 IPR013976 Metal-dependent hydrolase HDOD VFU_RS02285 b709bcb137abedd47bc03222e407bd4a 408 PANTHER PTHR33525 3 373 2.9E-145 T 21-04-2016 VFU_RS02285 b709bcb137abedd47bc03222e407bd4a 408 SMART SM00052 6 199 0.004 T 21-04-2016 IPR001633 EAL domain VFU_RS02285 b709bcb137abedd47bc03222e407bd4a 408 Gene3D G3DSA:3.20.20.450 81 186 2.7E-12 T 21-04-2016 IPR001633 EAL domain VFU_RS02285 b709bcb137abedd47bc03222e407bd4a 408 Pfam PF00563 EAL domain 81 194 2.0E-11 T 21-04-2016 IPR001633 EAL domain VFU_RS02285 b709bcb137abedd47bc03222e407bd4a 408 SUPERFAMILY SSF141868 5 200 9.55E-27 T 21-04-2016 IPR001633 EAL domain VFU_RS02285 b709bcb137abedd47bc03222e407bd4a 408 Pfam PF08668 HDOD domain 208 324 3.7E-15 T 21-04-2016 IPR013976 Metal-dependent hydrolase HDOD VFU_RS14975 1e1e28da7e312e7fc6a910ae1433e344 786 PANTHER PTHR30189 46 786 4.0E-101 T 21-04-2016 VFU_RS14975 1e1e28da7e312e7fc6a910ae1433e344 786 Gene3D G3DSA:2.60.450.10 50 204 1.1E-27 T 21-04-2016 VFU_RS14975 1e1e28da7e312e7fc6a910ae1433e344 786 Pfam PF03968 OstA-like protein 57 189 2.1E-19 T 21-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal VFU_RS14975 1e1e28da7e312e7fc6a910ae1433e344 786 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 9 758 20.773 T 21-04-2016 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 VFU_RS14975 1e1e28da7e312e7fc6a910ae1433e344 786 Pfam PF04453 Organic solvent tolerance protein 297 685 1.1E-109 T 21-04-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 VFU_RS14895 035c9bd4255d662236d48b9bbb5e0a24 341 PANTHER PTHR10359 9 296 7.7E-85 T 21-04-2016 VFU_RS14895 035c9bd4255d662236d48b9bbb5e0a24 341 Gene3D G3DSA:3.90.79.10 240 337 4.5E-15 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VFU_RS14895 035c9bd4255d662236d48b9bbb5e0a24 341 Pfam PF14815 NUDIX domain 241 334 1.6E-19 T 21-04-2016 IPR029119 MutY, C-terminal VFU_RS14895 035c9bd4255d662236d48b9bbb5e0a24 341 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 197 213 - T 21-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site VFU_RS14895 035c9bd4255d662236d48b9bbb5e0a24 341 SUPERFAMILY SSF48150 9 230 4.4E-73 T 21-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 VFU_RS14895 035c9bd4255d662236d48b9bbb5e0a24 341 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 40 171 3.7E-20 T 21-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 VFU_RS14895 035c9bd4255d662236d48b9bbb5e0a24 341 SMART SM00478 44 195 2.9E-45 T 21-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 VFU_RS14895 035c9bd4255d662236d48b9bbb5e0a24 341 SUPERFAMILY SSF55811 225 335 4.26E-20 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VFU_RS14895 035c9bd4255d662236d48b9bbb5e0a24 341 Pfam PF00633 Helix-hairpin-helix motif 106 133 2.6E-7 T 21-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 VFU_RS14895 035c9bd4255d662236d48b9bbb5e0a24 341 Gene3D G3DSA:1.10.340.30 26 127 3.0E-44 T 21-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 VFU_RS14895 035c9bd4255d662236d48b9bbb5e0a24 341 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 10 271 8.6E-104 T 21-04-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 VFU_RS14895 035c9bd4255d662236d48b9bbb5e0a24 341 ProSitePatterns PS01155 Endonuclease III family signature. 107 136 - T 21-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 VFU_RS14895 035c9bd4255d662236d48b9bbb5e0a24 341 Gene3D G3DSA:1.10.1670.10 128 229 9.6E-36 T 21-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal VFU_RS08195 cc1f17784147d5d762eac1a057637523 484 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 484 49.485 T 21-04-2016 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 VFU_RS08195 cc1f17784147d5d762eac1a057637523 484 Gene3D G3DSA:3.30.870.10 320 460 6.5E-35 T 21-04-2016 VFU_RS08195 cc1f17784147d5d762eac1a057637523 484 Gene3D G3DSA:3.30.870.10 112 317 1.4E-39 T 21-04-2016 VFU_RS08195 cc1f17784147d5d762eac1a057637523 484 Pfam PF13091 PLD-like domain 327 444 9.8E-25 T 21-04-2016 IPR025202 Phospholipase D-like domain VFU_RS08195 cc1f17784147d5d762eac1a057637523 484 Pfam PF13091 PLD-like domain 134 267 7.6E-17 T 21-04-2016 IPR025202 Phospholipase D-like domain VFU_RS08195 cc1f17784147d5d762eac1a057637523 484 PANTHER PTHR21248 18 484 2.8E-259 T 21-04-2016 VFU_RS08195 cc1f17784147d5d762eac1a057637523 484 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 11 484 3.9E-154 T 21-04-2016 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 VFU_RS08195 cc1f17784147d5d762eac1a057637523 484 Pfam PF13396 Phospholipase_D-nuclease N-terminal 24 59 7.9E-7 T 21-04-2016 IPR027379 Cardiolipin synthase N-terminal VFU_RS08195 cc1f17784147d5d762eac1a057637523 484 PANTHER PTHR21248:SF9 18 484 2.8E-259 T 21-04-2016 VFU_RS08195 cc1f17784147d5d762eac1a057637523 484 SMART SM00155 219 246 9.2E-6 T 21-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 VFU_RS08195 cc1f17784147d5d762eac1a057637523 484 SMART SM00155 397 424 2.7E-4 T 21-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 VFU_RS08195 cc1f17784147d5d762eac1a057637523 484 SUPERFAMILY SSF56024 90 313 3.36E-52 T 21-04-2016 VFU_RS08195 cc1f17784147d5d762eac1a057637523 484 SUPERFAMILY SSF56024 273 471 2.09E-45 T 21-04-2016 VFU_RS02820 ef3bc14b269063f43feff4f6e651634c 636 Pfam PF00990 Diguanylate cyclase, GGDEF domain 471 618 2.5E-33 T 21-04-2016 IPR000160 GGDEF domain VFU_RS02820 ef3bc14b269063f43feff4f6e651634c 636 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 466 621 3.6E-39 T 21-04-2016 IPR000160 GGDEF domain VFU_RS02820 ef3bc14b269063f43feff4f6e651634c 636 SUPERFAMILY SSF103190 37 208 8.63E-41 T 21-04-2016 IPR029151 Periplasmic sensor domain-like VFU_RS02820 ef3bc14b269063f43feff4f6e651634c 636 SUPERFAMILY SSF103190 212 305 3.37E-16 T 21-04-2016 IPR029151 Periplasmic sensor domain-like VFU_RS02820 ef3bc14b269063f43feff4f6e651634c 636 PANTHER PTHR10799 307 406 2.0E-24 T 21-04-2016 VFU_RS02820 ef3bc14b269063f43feff4f6e651634c 636 PANTHER PTHR10799 504 618 2.0E-24 T 21-04-2016 VFU_RS02820 ef3bc14b269063f43feff4f6e651634c 636 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 347 461 1.6E-9 T 21-04-2016 IPR000014 PAS domain VFU_RS02820 ef3bc14b269063f43feff4f6e651634c 636 SUPERFAMILY SSF55073 475 621 2.35E-37 T 21-04-2016 IPR029787 Nucleotide cyclase VFU_RS02820 ef3bc14b269063f43feff4f6e651634c 636 Pfam PF13426 PAS domain 358 457 4.3E-6 T 21-04-2016 IPR000014 PAS domain VFU_RS02820 ef3bc14b269063f43feff4f6e651634c 636 Gene3D G3DSA:3.30.70.270 471 621 1.0E-41 T 21-04-2016 VFU_RS02820 ef3bc14b269063f43feff4f6e651634c 636 Gene3D G3DSA:3.30.450.20 212 308 8.4E-20 T 21-04-2016 VFU_RS02820 ef3bc14b269063f43feff4f6e651634c 636 SMART SM00267 458 623 9.7E-39 T 21-04-2016 IPR000160 GGDEF domain VFU_RS02820 ef3bc14b269063f43feff4f6e651634c 636 Gene3D G3DSA:3.30.450.20 347 456 1.2E-10 T 21-04-2016 VFU_RS02820 ef3bc14b269063f43feff4f6e651634c 636 PANTHER PTHR10799:SF710 307 406 2.0E-24 T 21-04-2016 VFU_RS02820 ef3bc14b269063f43feff4f6e651634c 636 PANTHER PTHR10799:SF710 504 618 2.0E-24 T 21-04-2016 VFU_RS02820 ef3bc14b269063f43feff4f6e651634c 636 SUPERFAMILY SSF55785 358 457 8.22E-10 T 21-04-2016 IPR000014 PAS domain VFU_RS02820 ef3bc14b269063f43feff4f6e651634c 636 Gene3D G3DSA:3.30.450.20 76 208 9.1E-34 T 21-04-2016 VFU_RS15020 c66017f7c0a6e212963d717815649134 392 PIRSF PIRSF002401 1 375 2.1E-135 T 21-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 VFU_RS15020 c66017f7c0a6e212963d717815649134 392 Pfam PF01018 GTP1/OBG 3 156 1.1E-56 T 21-04-2016 IPR006169 GTP1/OBG domain GO:0005525 VFU_RS15020 c66017f7c0a6e212963d717815649134 392 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 7.8E-34 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 VFU_RS15020 c66017f7c0a6e212963d717815649134 392 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 7.8E-34 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 VFU_RS15020 c66017f7c0a6e212963d717815649134 392 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 7.8E-34 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 VFU_RS15020 c66017f7c0a6e212963d717815649134 392 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 7.8E-34 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 VFU_RS15020 c66017f7c0a6e212963d717815649134 392 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 1.9E-141 T 21-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 VFU_RS15020 c66017f7c0a6e212963d717815649134 392 Pfam PF01926 50S ribosome-binding GTPase 162 284 1.8E-23 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 VFU_RS15020 c66017f7c0a6e212963d717815649134 392 SUPERFAMILY SSF52540 151 335 2.94E-46 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS15020 c66017f7c0a6e212963d717815649134 392 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 21-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 VFU_RS15020 c66017f7c0a6e212963d717815649134 392 Gene3D G3DSA:2.70.210.12 2 155 8.1E-56 T 21-04-2016 IPR006169 GTP1/OBG domain GO:0005525 VFU_RS15020 c66017f7c0a6e212963d717815649134 392 SUPERFAMILY SSF82051 2 157 2.49E-54 T 21-04-2016 IPR006169 GTP1/OBG domain GO:0005525 VFU_RS15020 c66017f7c0a6e212963d717815649134 392 PANTHER PTHR11702:SF3 1 381 2.9E-181 T 21-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 VFU_RS15020 c66017f7c0a6e212963d717815649134 392 PANTHER PTHR11702 1 381 2.9E-181 T 21-04-2016 VFU_RS15020 c66017f7c0a6e212963d717815649134 392 Hamap MF_01454 GTPase Obg [obg]. 2 333 46.696 T 21-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 VFU_RS15020 c66017f7c0a6e212963d717815649134 392 Gene3D G3DSA:3.40.50.300 156 342 1.3E-47 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS06560 9157a332db598209f07da5c3c39b7ed6 476 PANTHER PTHR30009:SF2 6 475 3.8E-245 T 21-04-2016 VFU_RS06560 9157a332db598209f07da5c3c39b7ed6 476 Pfam PF00367 phosphotransferase system, EIIB 402 434 2.7E-12 T 21-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VFU_RS06560 9157a332db598209f07da5c3c39b7ed6 476 PANTHER PTHR30009 6 475 3.8E-245 T 21-04-2016 VFU_RS06560 9157a332db598209f07da5c3c39b7ed6 476 Gene3D G3DSA:3.30.1360.60 397 472 5.2E-27 T 21-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VFU_RS06560 9157a332db598209f07da5c3c39b7ed6 476 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 412 429 - T 21-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VFU_RS06560 9157a332db598209f07da5c3c39b7ed6 476 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 473 1.5E-200 T 21-04-2016 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0015758|GO:0016021 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VFU_RS06560 9157a332db598209f07da5c3c39b7ed6 476 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 376 458 3.0E-21 T 21-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VFU_RS06560 9157a332db598209f07da5c3c39b7ed6 476 SUPERFAMILY SSF55604 399 472 1.44E-20 T 21-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VFU_RS06560 9157a332db598209f07da5c3c39b7ed6 476 Pfam PF02378 Phosphotransferase system, EIIC 13 318 1.3E-75 T 21-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VFU_RS06725 806a59bcb2cc7e31be836ae8be119efa 214 Pfam PF01464 Transglycosylase SLT domain 53 152 5.4E-27 T 21-04-2016 IPR008258 Transglycosylase SLT domain 1 VFU_RS06725 806a59bcb2cc7e31be836ae8be119efa 214 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 60 88 - T 21-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VFU_RS06725 806a59bcb2cc7e31be836ae8be119efa 214 SUPERFAMILY SSF53955 32 174 1.21E-38 T 21-04-2016 IPR023346 Lysozyme-like domain VFU_RS06725 806a59bcb2cc7e31be836ae8be119efa 214 Gene3D G3DSA:1.10.530.10 38 175 9.4E-42 T 21-04-2016 VFU_RS06725 806a59bcb2cc7e31be836ae8be119efa 214 PANTHER PTHR21666:SF206 13 175 2.5E-44 T 21-04-2016 VFU_RS06725 806a59bcb2cc7e31be836ae8be119efa 214 PANTHER PTHR21666 13 175 2.5E-44 T 21-04-2016 VFU_RS06650 da39f6c1636c313dde73a413b1434fee 194 SMART SM00471 26 151 3.6E-4 T 21-04-2016 IPR003607 HD/PDEase domain VFU_RS06650 da39f6c1636c313dde73a413b1434fee 194 Gene3D G3DSA:1.10.3210.10 2 193 2.9E-46 T 21-04-2016 IPR006674 HD domain VFU_RS06650 da39f6c1636c313dde73a413b1434fee 194 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 3 194 45.713 T 21-04-2016 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 VFU_RS06650 da39f6c1636c313dde73a413b1434fee 194 SUPERFAMILY SSF109604 4 185 4.4E-43 T 21-04-2016 VFU_RS06650 da39f6c1636c313dde73a413b1434fee 194 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 80 184 5.0E-35 T 21-04-2016 VFU_RS06650 da39f6c1636c313dde73a413b1434fee 194 Pfam PF13023 HD domain 11 159 2.6E-16 T 21-04-2016 IPR006674 HD domain VFU_RS06635 0996f3d3a5c8cf819c9d1420153ac8b5 181 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 26 171 5.2E-50 T 21-04-2016 IPR023826 Rhomboid-like serine protease, proteobacteria VFU_RS06635 0996f3d3a5c8cf819c9d1420153ac8b5 181 Gene3D G3DSA:1.20.1540.10 6 174 2.4E-16 T 21-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 VFU_RS06635 0996f3d3a5c8cf819c9d1420153ac8b5 181 PANTHER PTHR22936:SF18 1 173 3.1E-60 T 21-04-2016 VFU_RS06635 0996f3d3a5c8cf819c9d1420153ac8b5 181 SUPERFAMILY SSF144091 4 173 2.49E-25 T 21-04-2016 VFU_RS06635 0996f3d3a5c8cf819c9d1420153ac8b5 181 Pfam PF01694 Rhomboid family 33 176 4.4E-13 T 21-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 VFU_RS06635 0996f3d3a5c8cf819c9d1420153ac8b5 181 PANTHER PTHR22936 1 173 3.1E-60 T 21-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 VFU_RS01345 3b4ccc9000893b1906079d895a765375 83 PANTHER PTHR38040:SF1 2 82 1.1E-37 T 21-04-2016 VFU_RS01345 3b4ccc9000893b1906079d895a765375 83 Pfam PF04380 Membrane fusogenic activity 1 78 2.2E-28 T 21-04-2016 IPR007475 Membrane fusogenic activity VFU_RS01345 3b4ccc9000893b1906079d895a765375 83 PANTHER PTHR38040 2 82 1.1E-37 T 21-04-2016 VFU_RS11425 0188a55a1704ef90efd77aaa8ee274eb 334 Gene3D G3DSA:3.40.50.300 25 182 2.8E-33 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS11425 0188a55a1704ef90efd77aaa8ee274eb 334 PANTHER PTHR13779 1 333 7.1E-189 T 21-04-2016 VFU_RS11425 0188a55a1704ef90efd77aaa8ee274eb 334 SMART SM00382 56 183 2.3E-13 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS11425 0188a55a1704ef90efd77aaa8ee274eb 334 Gene3D G3DSA:1.10.8.60 188 260 5.7E-34 T 21-04-2016 VFU_RS11425 0188a55a1704ef90efd77aaa8ee274eb 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 255 332 8.0E-38 T 21-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 VFU_RS11425 0188a55a1704ef90efd77aaa8ee274eb 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 258 331 8.7E-34 T 21-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 VFU_RS11425 0188a55a1704ef90efd77aaa8ee274eb 334 PANTHER PTHR13779:SF25 1 333 7.1E-189 T 21-04-2016 VFU_RS11425 0188a55a1704ef90efd77aaa8ee274eb 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 16 240 1.0E-116 T 21-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 VFU_RS11425 0188a55a1704ef90efd77aaa8ee274eb 334 SUPERFAMILY SSF46785 262 333 8.55E-26 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS11425 0188a55a1704ef90efd77aaa8ee274eb 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 28 331 6.0E-148 T 21-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 VFU_RS11425 0188a55a1704ef90efd77aaa8ee274eb 334 SUPERFAMILY SSF52540 25 256 1.58E-53 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS11425 0188a55a1704ef90efd77aaa8ee274eb 334 Gene3D G3DSA:1.10.10.10 262 333 1.1E-35 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS11425 0188a55a1704ef90efd77aaa8ee274eb 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 183.15 T 21-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 VFU_RS02410 8126ea3a4fe0f489370e65a3942818bc 208 SUPERFAMILY SSF46785 3 69 1.33E-18 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS02410 8126ea3a4fe0f489370e65a3942818bc 208 Hamap MF_00015 LexA repressor [lexA]. 3 205 31.96 T 21-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 VFU_RS02410 8126ea3a4fe0f489370e65a3942818bc 208 Gene3D G3DSA:2.10.109.10 82 205 1.3E-44 T 21-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain VFU_RS02410 8126ea3a4fe0f489370e65a3942818bc 208 SUPERFAMILY SSF51306 82 204 1.92E-36 T 21-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C VFU_RS02410 8126ea3a4fe0f489370e65a3942818bc 208 PANTHER PTHR33516:SF2 1 208 5.5E-105 T 21-04-2016 VFU_RS02410 8126ea3a4fe0f489370e65a3942818bc 208 Pfam PF00717 Peptidase S24-like 120 185 4.9E-15 T 21-04-2016 IPR019759 Peptidase S24/S26A/S26B VFU_RS02410 8126ea3a4fe0f489370e65a3942818bc 208 PANTHER PTHR33516 1 208 5.5E-105 T 21-04-2016 VFU_RS02410 8126ea3a4fe0f489370e65a3942818bc 208 TIGRFAM TIGR00498 lexA: repressor LexA 1 205 1.4E-80 T 21-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 VFU_RS02410 8126ea3a4fe0f489370e65a3942818bc 208 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 128 139 2.5E-12 T 21-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 VFU_RS02410 8126ea3a4fe0f489370e65a3942818bc 208 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 117 127 2.5E-12 T 21-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 VFU_RS02410 8126ea3a4fe0f489370e65a3942818bc 208 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 156 168 2.5E-12 T 21-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 VFU_RS02410 8126ea3a4fe0f489370e65a3942818bc 208 Pfam PF01726 LexA DNA binding domain 1 65 8.6E-30 T 21-04-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 VFU_RS02410 8126ea3a4fe0f489370e65a3942818bc 208 Gene3D G3DSA:1.10.10.10 1 69 2.3E-28 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS00020 67a00f44be46394ca78ab54db422cbb9 91 SUPERFAMILY SSF75169 2 91 2.35E-21 T 21-04-2016 IPR027396 DsrEFH-like VFU_RS00020 67a00f44be46394ca78ab54db422cbb9 91 PANTHER PTHR37526 1 91 9.6E-21 T 21-04-2016 VFU_RS00020 67a00f44be46394ca78ab54db422cbb9 91 Pfam PF04077 DsrH like protein 9 87 4.8E-22 T 21-04-2016 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 VFU_RS00020 67a00f44be46394ca78ab54db422cbb9 91 Gene3D G3DSA:3.40.1260.10 1 90 2.4E-22 T 21-04-2016 IPR027396 DsrEFH-like VFU_RS00020 67a00f44be46394ca78ab54db422cbb9 91 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 3 91 2.7E-22 T 21-04-2016 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 VFU_RS11560 2235bf33be4060b2f9f1150bab7306a6 644 SUPERFAMILY SSF52540 236 368 1.75E-17 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS11560 2235bf33be4060b2f9f1150bab7306a6 644 SUPERFAMILY SSF52540 73 154 1.75E-17 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS11560 2235bf33be4060b2f9f1150bab7306a6 644 PANTHER PTHR30267 1 644 4.8E-298 T 21-04-2016 VFU_RS11560 2235bf33be4060b2f9f1150bab7306a6 644 PANTHER PTHR30267:SF2 1 644 4.8E-298 T 21-04-2016 VFU_RS11560 2235bf33be4060b2f9f1150bab7306a6 644 PIRSF PIRSF000549 1 644 3.5E-287 T 21-04-2016 IPR016230 Serine-protein kinase, PrkA GO:0004672 VFU_RS11560 2235bf33be4060b2f9f1150bab7306a6 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 2.7E-74 T 21-04-2016 IPR010650 PrkA C-terminal domain VFU_RS11560 2235bf33be4060b2f9f1150bab7306a6 644 Gene3D G3DSA:3.40.50.300 243 329 2.8E-10 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS11560 2235bf33be4060b2f9f1150bab7306a6 644 Gene3D G3DSA:3.40.50.300 73 170 2.8E-10 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS11560 2235bf33be4060b2f9f1150bab7306a6 644 SMART SM00763 19 380 1.4E-216 T 21-04-2016 IPR013153 PrkA AAA domain VFU_RS11560 2235bf33be4060b2f9f1150bab7306a6 644 Pfam PF08298 PrkA AAA domain 20 380 5.8E-174 T 21-04-2016 IPR013153 PrkA AAA domain VFU_RS09315 ffd78bf39bd46cb741016092a436fb95 206 PANTHER PTHR10422:SF23 30 165 4.6E-90 T 21-04-2016 VFU_RS09315 ffd78bf39bd46cb741016092a436fb95 206 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 9 188 6.2E-82 T 21-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO VFU_RS09315 ffd78bf39bd46cb741016092a436fb95 206 SUPERFAMILY SSF46626 21 201 4.72E-27 T 21-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VFU_RS09315 ffd78bf39bd46cb741016092a436fb95 206 PANTHER PTHR10422 30 165 4.6E-90 T 21-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 VFU_RS09315 ffd78bf39bd46cb741016092a436fb95 206 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 9 186 4.6E-82 T 21-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO VFU_RS09315 ffd78bf39bd46cb741016092a436fb95 206 Gene3D G3DSA:1.10.760.10 21 202 3.4E-33 T 21-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VFU_RS14255 2899778ffb2f4690a7208bfa300d7f3c 495 SUPERFAMILY SSF53623 111 338 1.7E-74 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VFU_RS14255 2899778ffb2f4690a7208bfa300d7f3c 495 Pfam PF01225 Mur ligase family, catalytic domain 26 105 2.0E-10 T 21-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 VFU_RS14255 2899778ffb2f4690a7208bfa300d7f3c 495 Pfam PF02875 Mur ligase family, glutamate ligase domain 341 424 6.9E-24 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VFU_RS14255 2899778ffb2f4690a7208bfa300d7f3c 495 Gene3D G3DSA:3.40.1190.10 113 342 5.4E-77 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VFU_RS14255 2899778ffb2f4690a7208bfa300d7f3c 495 Pfam PF08245 Mur ligase middle domain 117 318 3.3E-51 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VFU_RS14255 2899778ffb2f4690a7208bfa300d7f3c 495 PANTHER PTHR23135 14 492 5.6E-199 T 21-04-2016 VFU_RS14255 2899778ffb2f4690a7208bfa300d7f3c 495 SUPERFAMILY SSF63418 8 108 1.31E-20 T 21-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 VFU_RS14255 2899778ffb2f4690a7208bfa300d7f3c 495 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 5 491 33.368 T 21-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 VFU_RS14255 2899778ffb2f4690a7208bfa300d7f3c 495 SUPERFAMILY SSF53244 340 491 1.11E-49 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VFU_RS14255 2899778ffb2f4690a7208bfa300d7f3c 495 PANTHER PTHR23135:SF4 14 492 5.6E-199 T 21-04-2016 VFU_RS14255 2899778ffb2f4690a7208bfa300d7f3c 495 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 25 491 2.5E-170 T 21-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 VFU_RS14255 2899778ffb2f4690a7208bfa300d7f3c 495 Gene3D G3DSA:3.40.1390.10 9 108 1.4E-28 T 21-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 VFU_RS14255 2899778ffb2f4690a7208bfa300d7f3c 495 Gene3D G3DSA:3.90.190.20 343 485 1.3E-55 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VFU_RS06130 06407830b6e8cfa6d9a0b5adc34bf4c3 588 Gene3D G3DSA:3.90.700.10 243 349 5.3E-41 T 21-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain VFU_RS06130 06407830b6e8cfa6d9a0b5adc34bf4c3 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 21-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 VFU_RS06130 06407830b6e8cfa6d9a0b5adc34bf4c3 588 Gene3D G3DSA:4.10.80.40 556 588 8.1E-21 T 21-04-2016 VFU_RS06130 06407830b6e8cfa6d9a0b5adc34bf4c3 588 Gene3D G3DSA:1.20.58.100 446 555 2.6E-36 T 21-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 VFU_RS06130 06407830b6e8cfa6d9a0b5adc34bf4c3 588 SUPERFAMILY SSF51905 5 259 2.09E-71 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS06130 06407830b6e8cfa6d9a0b5adc34bf4c3 588 SUPERFAMILY SSF51905 359 438 2.09E-71 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS06130 06407830b6e8cfa6d9a0b5adc34bf4c3 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 8.1E-36 T 21-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 VFU_RS06130 06407830b6e8cfa6d9a0b5adc34bf4c3 588 Gene3D G3DSA:3.50.50.60 6 242 1.7E-115 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS06130 06407830b6e8cfa6d9a0b5adc34bf4c3 588 Gene3D G3DSA:3.50.50.60 351 424 1.7E-115 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS06130 06407830b6e8cfa6d9a0b5adc34bf4c3 588 SUPERFAMILY SSF56425 236 356 2.69E-42 T 21-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain VFU_RS06130 06407830b6e8cfa6d9a0b5adc34bf4c3 588 PANTHER PTHR11632 2 574 0.0 T 21-04-2016 VFU_RS06130 06407830b6e8cfa6d9a0b5adc34bf4c3 588 PIRSF PIRSF000171 1 580 4.1E-48 T 21-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit VFU_RS06130 06407830b6e8cfa6d9a0b5adc34bf4c3 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 8.9E-274 T 21-04-2016 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 VFU_RS06130 06407830b6e8cfa6d9a0b5adc34bf4c3 588 PANTHER PTHR11632:SF5 2 574 0.0 T 21-04-2016 VFU_RS06130 06407830b6e8cfa6d9a0b5adc34bf4c3 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 1.0E-239 T 21-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 VFU_RS06130 06407830b6e8cfa6d9a0b5adc34bf4c3 588 SUPERFAMILY SSF46977 451 588 4.84E-46 T 21-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 VFU_RS06130 06407830b6e8cfa6d9a0b5adc34bf4c3 588 Pfam PF00890 FAD binding domain 9 405 7.3E-118 T 21-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain VFU_RS02565 d546802dd57bdb2494325fdbaff36355 128 PANTHER PTHR11079 1 62 1.6E-30 T 21-04-2016 VFU_RS02565 d546802dd57bdb2494325fdbaff36355 128 SUPERFAMILY SSF55174 8 102 1.77E-31 T 21-04-2016 VFU_RS02565 d546802dd57bdb2494325fdbaff36355 128 Pfam PF01479 S4 domain 8 54 9.7E-13 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VFU_RS02565 d546802dd57bdb2494325fdbaff36355 128 PANTHER PTHR11079:SF70 1 62 1.6E-30 T 21-04-2016 VFU_RS02565 d546802dd57bdb2494325fdbaff36355 128 Gene3D G3DSA:3.10.290.10 7 102 6.0E-39 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VFU_RS02565 d546802dd57bdb2494325fdbaff36355 128 PIRSF PIRSF016821 5 128 7.2E-42 T 21-04-2016 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 VFU_RS02565 d546802dd57bdb2494325fdbaff36355 128 SMART SM00363 8 71 1.9E-10 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VFU_RS00230 4d10c3ce2cd421e49f69d8bf20480f6c 164 PANTHER PTHR11560 1 162 6.5E-54 T 21-04-2016 VFU_RS00230 4d10c3ce2cd421e49f69d8bf20480f6c 164 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 159 24.357 T 21-04-2016 IPR022973 Ribosomal protein L10 VFU_RS00230 4d10c3ce2cd421e49f69d8bf20480f6c 164 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 21-04-2016 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS00230 4d10c3ce2cd421e49f69d8bf20480f6c 164 SUPERFAMILY SSF160369 4 158 4.32E-44 T 21-04-2016 VFU_RS00230 4d10c3ce2cd421e49f69d8bf20480f6c 164 Pfam PF00466 Ribosomal protein L10 6 101 1.6E-25 T 21-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 VFU_RS08870 ff8b3c517241ba25bfc3b424defe52a9 298 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 6 295 2.0E-126 T 21-04-2016 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747|UniPathway: UPA00946 VFU_RS08870 ff8b3c517241ba25bfc3b424defe52a9 298 PANTHER PTHR21631:SF4 3 296 5.0E-162 T 21-04-2016 VFU_RS08870 ff8b3c517241ba25bfc3b424defe52a9 298 PANTHER PTHR21631 3 296 5.0E-162 T 21-04-2016 VFU_RS08870 ff8b3c517241ba25bfc3b424defe52a9 298 ProSitePatterns PS00161 Isocitrate lyase signature. 119 124 - T 21-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 VFU_RS08870 ff8b3c517241ba25bfc3b424defe52a9 298 Gene3D G3DSA:3.20.20.60 5 291 2.9E-97 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VFU_RS08870 ff8b3c517241ba25bfc3b424defe52a9 298 Pfam PF13714 Phosphoenolpyruvate phosphomutase 14 258 1.1E-45 T 21-04-2016 VFU_RS08870 ff8b3c517241ba25bfc3b424defe52a9 298 SUPERFAMILY SSF51621 5 294 6.28E-97 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VFU_RS08870 ff8b3c517241ba25bfc3b424defe52a9 298 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 3 296 49.914 T 21-04-2016 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747|UniPathway: UPA00946 VFU_RS09785 276544dd5c55e11991a03203ee99f4cd 216 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 1 216 33.535 T 21-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 VFU_RS09785 276544dd5c55e11991a03203ee99f4cd 216 Pfam PF13394 4Fe-4S single cluster domain 17 129 9.1E-12 T 21-04-2016 VFU_RS09785 276544dd5c55e11991a03203ee99f4cd 216 Pfam PF04055 Radical SAM superfamily 20 117 2.9E-7 T 21-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VFU_RS09785 276544dd5c55e11991a03203ee99f4cd 216 SUPERFAMILY SSF102114 21 116 2.35E-7 T 21-04-2016 VFU_RS09785 276544dd5c55e11991a03203ee99f4cd 216 PANTHER PTHR11228:SF6 1 49 8.1E-50 T 21-04-2016 VFU_RS09785 276544dd5c55e11991a03203ee99f4cd 216 PANTHER PTHR11228:SF6 65 215 8.1E-50 T 21-04-2016 VFU_RS09785 276544dd5c55e11991a03203ee99f4cd 216 PANTHER PTHR11228 1 49 8.1E-50 T 21-04-2016 VFU_RS09785 276544dd5c55e11991a03203ee99f4cd 216 PANTHER PTHR11228 65 215 8.1E-50 T 21-04-2016 VFU_RS09785 276544dd5c55e11991a03203ee99f4cd 216 Gene3D G3DSA:3.20.20.70 22 116 1.9E-7 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS09785 276544dd5c55e11991a03203ee99f4cd 216 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 2 215 5.1E-111 T 21-04-2016 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 VFU_RS09785 276544dd5c55e11991a03203ee99f4cd 216 PIRSF PIRSF000370 1 216 9.3E-65 T 21-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 VFU_RS12720 8d37ef29e562777770cff37571c0a415 244 Pfam PF07556 Protein of unknown function (DUF1538) 21 242 2.0E-71 T 21-04-2016 IPR011435 Protein of unknown function DUF1538 VFU_RS03055 2918501c8d276abc6caaebd42bb4cf8d 877 Gene3D G3DSA:1.20.1440.90 273 387 5.8E-32 T 21-04-2016 VFU_RS03055 2918501c8d276abc6caaebd42bb4cf8d 877 SUPERFAMILY SSF51621 6 877 0.0 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VFU_RS03055 2918501c8d276abc6caaebd42bb4cf8d 877 PANTHER PTHR30523:SF3 1 877 0.0 T 21-04-2016 VFU_RS03055 2918501c8d276abc6caaebd42bb4cf8d 877 PANTHER PTHR30523 1 877 0.0 T 21-04-2016 VFU_RS03055 2918501c8d276abc6caaebd42bb4cf8d 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 2.99E-67 T 21-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VFU_RS03055 2918501c8d276abc6caaebd42bb4cf8d 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 245 260 2.99E-67 T 21-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VFU_RS03055 2918501c8d276abc6caaebd42bb4cf8d 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 707 733 2.99E-67 T 21-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VFU_RS03055 2918501c8d276abc6caaebd42bb4cf8d 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 575 604 2.99E-67 T 21-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VFU_RS03055 2918501c8d276abc6caaebd42bb4cf8d 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 2.99E-67 T 21-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VFU_RS03055 2918501c8d276abc6caaebd42bb4cf8d 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 384 404 2.99E-67 T 21-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VFU_RS03055 2918501c8d276abc6caaebd42bb4cf8d 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 533 553 2.99E-67 T 21-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VFU_RS03055 2918501c8d276abc6caaebd42bb4cf8d 877 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 535 547 - T 21-04-2016 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VFU_RS03055 2918501c8d276abc6caaebd42bb4cf8d 877 Pfam PF00311 Phosphoenolpyruvate carboxylase 129 877 5.8E-287 T 21-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VFU_RS03055 2918501c8d276abc6caaebd42bb4cf8d 877 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 877 17.852 T 21-04-2016 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VFU_RS03055 2918501c8d276abc6caaebd42bb4cf8d 877 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 21-04-2016 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VFU_RS07585 a113a67b38ec5a3114c8403141af4bda 314 Pfam PF13409 Glutathione S-transferase, N-terminal domain 56 146 7.6E-22 T 21-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VFU_RS07585 a113a67b38ec5a3114c8403141af4bda 314 Gene3D G3DSA:3.40.30.10 30 166 2.1E-21 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS07585 a113a67b38ec5a3114c8403141af4bda 314 SUPERFAMILY SSF52833 31 149 2.39E-16 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS07585 a113a67b38ec5a3114c8403141af4bda 314 Gene3D G3DSA:1.20.1050.10 167 276 1.6E-29 T 21-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like VFU_RS07585 a113a67b38ec5a3114c8403141af4bda 314 PANTHER PTHR32419 1 314 2.8E-177 T 21-04-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 VFU_RS07585 a113a67b38ec5a3114c8403141af4bda 314 PANTHER PTHR32419:SF6 1 314 2.8E-177 T 21-04-2016 VFU_RS07585 a113a67b38ec5a3114c8403141af4bda 314 Pfam PF13410 Glutathione S-transferase, C-terminal domain 192 263 2.3E-13 T 21-04-2016 VFU_RS07585 a113a67b38ec5a3114c8403141af4bda 314 PIRSF PIRSF015753 4 312 4.8E-137 T 21-04-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 VFU_RS07585 a113a67b38ec5a3114c8403141af4bda 314 SUPERFAMILY SSF47616 162 312 1.1E-39 T 21-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like VFU_RS13870 3cf9951422901a1012bd51ca44e52506 407 PANTHER PTHR13696 93 403 1.3E-23 T 21-04-2016 VFU_RS13870 3cf9951422901a1012bd51ca44e52506 407 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 157 357 1.1E-10 T 21-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain VFU_RS13870 3cf9951422901a1012bd51ca44e52506 407 SUPERFAMILY SSF52540 156 394 5.58E-31 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS13870 3cf9951422901a1012bd51ca44e52506 407 Gene3D G3DSA:3.40.50.300 153 392 3.9E-43 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS15090 ea708e8ffa4325c09fef59e16ab788b2 275 PANTHER PTHR23088 3 275 1.3E-107 T 21-04-2016 VFU_RS15090 ea708e8ffa4325c09fef59e16ab788b2 275 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 149 169 - T 21-04-2016 IPR001110 Uncharacterised protein family UPF0012, conserved site VFU_RS15090 ea708e8ffa4325c09fef59e16ab788b2 275 SUPERFAMILY SSF56317 3 263 1.19E-77 T 21-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VFU_RS15090 ea708e8ffa4325c09fef59e16ab788b2 275 Gene3D G3DSA:3.60.110.10 3 267 2.3E-83 T 21-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VFU_RS15090 ea708e8ffa4325c09fef59e16ab788b2 275 PANTHER PTHR23088:SF27 3 275 1.3E-107 T 21-04-2016 VFU_RS15090 ea708e8ffa4325c09fef59e16ab788b2 275 Pfam PF00795 Carbon-nitrogen hydrolase 3 255 1.5E-52 T 21-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VFU_RS07965 82ee1eb34941d2dbb6fd8895faf8956a 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.3E-20 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VFU_RS07965 82ee1eb34941d2dbb6fd8895faf8956a 336 PANTHER PTHR30146 1 332 2.9E-159 T 21-04-2016 VFU_RS07965 82ee1eb34941d2dbb6fd8895faf8956a 336 Gene3D G3DSA:1.10.260.40 2 53 1.7E-25 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VFU_RS07965 82ee1eb34941d2dbb6fd8895faf8956a 336 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 334 64.556 T 21-04-2016 IPR023588 Transcription regulator HTH, PurR GO:0006355 UniPathway: UPA00488 VFU_RS07965 82ee1eb34941d2dbb6fd8895faf8956a 336 SMART SM00354 1 71 4.0E-38 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VFU_RS07965 82ee1eb34941d2dbb6fd8895faf8956a 336 Gene3D G3DSA:3.40.50.2300 174 311 7.3E-55 T 21-04-2016 VFU_RS07965 82ee1eb34941d2dbb6fd8895faf8956a 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VFU_RS07965 82ee1eb34941d2dbb6fd8895faf8956a 336 SUPERFAMILY SSF53822 60 332 1.43E-94 T 21-04-2016 IPR028082 Periplasmic binding protein-like I VFU_RS07965 82ee1eb34941d2dbb6fd8895faf8956a 336 Pfam PF13377 Periplasmic binding protein-like domain 170 330 6.9E-44 T 21-04-2016 VFU_RS07965 82ee1eb34941d2dbb6fd8895faf8956a 336 SUPERFAMILY SSF47413 1 59 1.02E-17 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VFU_RS07965 82ee1eb34941d2dbb6fd8895faf8956a 336 Gene3D G3DSA:3.40.50.2300 54 173 3.2E-45 T 21-04-2016 VFU_RS07965 82ee1eb34941d2dbb6fd8895faf8956a 336 PANTHER PTHR30146:SF38 1 332 2.9E-159 T 21-04-2016 VFU_RS07965 82ee1eb34941d2dbb6fd8895faf8956a 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 1.99E-6 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VFU_RS07965 82ee1eb34941d2dbb6fd8895faf8956a 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 1.99E-6 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VFU_RS04640 302726a4c1615d8c1227826f01a9c2d1 711 SUPERFAMILY SSF50249 607 695 9.94E-22 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS04640 302726a4c1615d8c1227826f01a9c2d1 711 Pfam PF00013 KH domain 558 615 1.1E-9 T 21-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 VFU_RS04640 302726a4c1615d8c1227826f01a9c2d1 711 SUPERFAMILY SSF55666 146 236 3.09E-28 T 21-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 VFU_RS04640 302726a4c1615d8c1227826f01a9c2d1 711 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 243 321 1.2E-25 T 21-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VFU_RS04640 302726a4c1615d8c1227826f01a9c2d1 711 Pfam PF00575 S1 RNA binding domain 620 691 3.5E-19 T 21-04-2016 IPR003029 S1 domain GO:0003676 VFU_RS04640 302726a4c1615d8c1227826f01a9c2d1 711 PIRSF PIRSF005499 2 711 4.1E-300 T 21-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VFU_RS04640 302726a4c1615d8c1227826f01a9c2d1 711 Gene3D G3DSA:3.30.1370.10 553 618 7.0E-26 T 21-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 VFU_RS04640 302726a4c1615d8c1227826f01a9c2d1 711 SMART SM00316 621 691 6.7E-26 T 21-04-2016 IPR022967 RNA-binding domain, S1 VFU_RS04640 302726a4c1615d8c1227826f01a9c2d1 711 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 1.9E-20 T 21-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 VFU_RS04640 302726a4c1615d8c1227826f01a9c2d1 711 Pfam PF01138 3' exoribonuclease family, domain 1 17 145 1.3E-18 T 21-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 VFU_RS04640 302726a4c1615d8c1227826f01a9c2d1 711 SUPERFAMILY SSF54791 553 630 7.06E-17 T 21-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 VFU_RS04640 302726a4c1615d8c1227826f01a9c2d1 711 SUPERFAMILY SSF54211 5 145 1.92E-48 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VFU_RS04640 302726a4c1615d8c1227826f01a9c2d1 711 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 4 694 30.309 T 21-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VFU_RS04640 302726a4c1615d8c1227826f01a9c2d1 711 PANTHER PTHR11252:SF0 2 711 0.0 T 21-04-2016 VFU_RS04640 302726a4c1615d8c1227826f01a9c2d1 711 SUPERFAMILY SSF54211 293 489 3.69E-47 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VFU_RS04640 302726a4c1615d8c1227826f01a9c2d1 711 Gene3D G3DSA:3.30.230.70 3 226 2.4E-81 T 21-04-2016 IPR027408 PNPase/RNase PH domain VFU_RS04640 302726a4c1615d8c1227826f01a9c2d1 711 Gene3D G3DSA:3.30.230.70 315 543 1.0E-88 T 21-04-2016 IPR027408 PNPase/RNase PH domain VFU_RS04640 302726a4c1615d8c1227826f01a9c2d1 711 SMART SM00322 553 618 5.7E-12 T 21-04-2016 IPR004087 K Homology domain GO:0003676 VFU_RS04640 302726a4c1615d8c1227826f01a9c2d1 711 SUPERFAMILY SSF55666 451 549 1.54E-27 T 21-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 VFU_RS04640 302726a4c1615d8c1227826f01a9c2d1 711 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 11 692 0.0 T 21-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VFU_RS04640 302726a4c1615d8c1227826f01a9c2d1 711 Pfam PF03725 3' exoribonuclease family, domain 2 461 528 7.0E-5 T 21-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 VFU_RS04640 302726a4c1615d8c1227826f01a9c2d1 711 Pfam PF03725 3' exoribonuclease family, domain 2 148 211 4.9E-13 T 21-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 VFU_RS04640 302726a4c1615d8c1227826f01a9c2d1 711 PANTHER PTHR11252 2 711 0.0 T 21-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VFU_RS04640 302726a4c1615d8c1227826f01a9c2d1 711 Gene3D G3DSA:2.40.50.140 619 694 5.0E-27 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS04640 302726a4c1615d8c1227826f01a9c2d1 711 Gene3D G3DSA:1.10.10.400 227 314 5.9E-26 T 21-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VFU_RS20550 f790eba7d652661e97102f186f46117a 208 Pfam PF01171 PP-loop family 3 161 4.7E-51 T 21-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal VFU_RS20550 f790eba7d652661e97102f186f46117a 208 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 1 207 16.227 T 21-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VFU_RS20550 f790eba7d652661e97102f186f46117a 208 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 6 165 5.2E-45 T 21-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VFU_RS20550 f790eba7d652661e97102f186f46117a 208 PANTHER PTHR11807 6 200 1.5E-63 T 21-04-2016 VFU_RS20550 f790eba7d652661e97102f186f46117a 208 SUPERFAMILY SSF52402 6 194 4.49E-49 T 21-04-2016 VFU_RS20550 f790eba7d652661e97102f186f46117a 208 PANTHER PTHR11807:SF2 6 200 1.5E-63 T 21-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VFU_RS03750 8af8b3acabdff330016328a84cad397f 367 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 346 3.5E-119 T 21-04-2016 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 VFU_RS03750 8af8b3acabdff330016328a84cad397f 367 PANTHER PTHR33529 2 364 6.0E-122 T 21-04-2016 VFU_RS03750 8af8b3acabdff330016328a84cad397f 367 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 344 2.2E-73 T 21-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 VFU_RS03750 8af8b3acabdff330016328a84cad397f 367 PANTHER PTHR33529:SF2 2 364 6.0E-122 T 21-04-2016 VFU_RS14465 84478de520e13c85d4054d4cf84fd9d1 65 Hamap MF_00167 Carbon storage regulator [csrA]. 1 62 20.524 T 21-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 VFU_RS14465 84478de520e13c85d4054d4cf84fd9d1 65 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 4.0E-20 T 21-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 VFU_RS14465 84478de520e13c85d4054d4cf84fd9d1 65 SUPERFAMILY SSF117130 1 54 6.93E-21 T 21-04-2016 VFU_RS14465 84478de520e13c85d4054d4cf84fd9d1 65 PANTHER PTHR34984:SF1 1 55 1.5E-31 T 21-04-2016 VFU_RS14465 84478de520e13c85d4054d4cf84fd9d1 65 Pfam PF02599 Global regulator protein family 1 52 2.1E-26 T 21-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 VFU_RS14465 84478de520e13c85d4054d4cf84fd9d1 65 PANTHER PTHR34984 1 55 1.5E-31 T 21-04-2016 VFU_RS14465 84478de520e13c85d4054d4cf84fd9d1 65 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 58 4.4E-30 T 21-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 VFU_RS01920 b32b864e5e2f4f5b3c097a20db50a906 400 Gene3D G3DSA:3.20.20.70 176 384 2.5E-62 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS01920 b32b864e5e2f4f5b3c097a20db50a906 400 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 170 386 18.924 T 21-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 VFU_RS01920 b32b864e5e2f4f5b3c097a20db50a906 400 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 193 380 7.0E-45 T 21-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 VFU_RS01920 b32b864e5e2f4f5b3c097a20db50a906 400 SUPERFAMILY SSF51391 183 383 6.02E-57 T 21-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 VFU_RS01920 b32b864e5e2f4f5b3c097a20db50a906 400 PANTHER PTHR20857 173 385 2.7E-56 T 21-04-2016 VFU_RS01920 b32b864e5e2f4f5b3c097a20db50a906 400 Pfam PF02581 Thiamine monophosphate synthase/TENI 191 368 2.4E-50 T 21-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 VFU_RS14320 235a662d3457648d4d79039fec348193 197 Gene3D G3DSA:2.102.10.10 9 192 2.5E-42 T 21-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 VFU_RS14320 235a662d3457648d4d79039fec348193 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 149 161 1.3E-7 T 21-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 VFU_RS14320 235a662d3457648d4d79039fec348193 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 162 174 1.3E-7 T 21-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 VFU_RS14320 235a662d3457648d4d79039fec348193 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 119 130 1.3E-7 T 21-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 VFU_RS14320 235a662d3457648d4d79039fec348193 197 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 4 40 2.6E-15 T 21-04-2016 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 VFU_RS14320 235a662d3457648d4d79039fec348193 197 Pfam PF00355 Rieske [2Fe-2S] domain 55 174 1.2E-11 T 21-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 VFU_RS14320 235a662d3457648d4d79039fec348193 197 SUPERFAMILY SSF50022 30 192 2.77E-43 T 21-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 VFU_RS14320 235a662d3457648d4d79039fec348193 197 PANTHER PTHR10134:SF8 1 194 1.3E-119 T 21-04-2016 VFU_RS14320 235a662d3457648d4d79039fec348193 197 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 190 2.2E-76 T 21-04-2016 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 VFU_RS14320 235a662d3457648d4d79039fec348193 197 PANTHER PTHR10134 1 194 1.3E-119 T 21-04-2016 IPR014349 Rieske iron-sulphur protein GO:0016679|GO:0055114 VFU_RS05070 14d1c040498d4b58271a5d84789ed7c1 198 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 197 8.4E-107 T 21-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VFU_RS05070 14d1c040498d4b58271a5d84789ed7c1 198 PIRSF PIRSF006102 1 198 2.7E-67 T 21-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 VFU_RS05070 14d1c040498d4b58271a5d84789ed7c1 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 196 1.8E-60 T 21-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 VFU_RS05070 14d1c040498d4b58271a5d84789ed7c1 198 PANTHER PTHR30335:SF1 2 198 9.0E-146 T 21-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VFU_RS05070 14d1c040498d4b58271a5d84789ed7c1 198 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 198 29.847 T 21-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VFU_RS05070 14d1c040498d4b58271a5d84789ed7c1 198 PANTHER PTHR30335 2 198 9.0E-146 T 21-04-2016 VFU_RS00335 4637c69cde77629c94028e48ff6267f9 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 136 145 1.0E-12 T 21-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 VFU_RS00335 4637c69cde77629c94028e48ff6267f9 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 30 42 1.0E-12 T 21-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 VFU_RS00335 4637c69cde77629c94028e48ff6267f9 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 46 53 1.0E-12 T 21-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 VFU_RS00335 4637c69cde77629c94028e48ff6267f9 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 111 130 1.0E-12 T 21-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 VFU_RS00335 4637c69cde77629c94028e48ff6267f9 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 95 104 1.0E-12 T 21-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 VFU_RS00335 4637c69cde77629c94028e48ff6267f9 237 Pfam PF00175 Oxidoreductase NAD-binding domain 112 215 2.4E-22 T 21-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VFU_RS00335 4637c69cde77629c94028e48ff6267f9 237 PANTHER PTHR19370 3 237 2.5E-113 T 21-04-2016 VFU_RS00335 4637c69cde77629c94028e48ff6267f9 237 Gene3D G3DSA:3.40.50.80 104 235 3.9E-35 T 21-04-2016 VFU_RS00335 4637c69cde77629c94028e48ff6267f9 237 PANTHER PTHR19370:SF119 3 237 2.5E-113 T 21-04-2016 VFU_RS00335 4637c69cde77629c94028e48ff6267f9 237 Gene3D G3DSA:2.40.30.10 1 101 8.9E-27 T 21-04-2016 VFU_RS00335 4637c69cde77629c94028e48ff6267f9 237 Pfam PF00970 Oxidoreductase FAD-binding domain 17 99 9.4E-6 T 21-04-2016 IPR008333 Oxidoreductase, FAD-binding domain VFU_RS00335 4637c69cde77629c94028e48ff6267f9 237 SUPERFAMILY SSF52343 104 235 9.95E-34 T 21-04-2016 VFU_RS00335 4637c69cde77629c94028e48ff6267f9 237 SUPERFAMILY SSF63380 2 101 3.56E-18 T 21-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 VFU_RS09155 2df73ac2e74c2655391ba151c8e5e0c6 682 PANTHER PTHR24423 447 669 4.7E-200 T 21-04-2016 VFU_RS09155 2df73ac2e74c2655391ba151c8e5e0c6 682 SUPERFAMILY SSF47384 446 515 4.51E-11 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS09155 2df73ac2e74c2655391ba151c8e5e0c6 682 SMART SM00388 451 518 1.7E-7 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS09155 2df73ac2e74c2655391ba151c8e5e0c6 682 SUPERFAMILY SSF55874 508 670 1.09E-35 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS09155 2df73ac2e74c2655391ba151c8e5e0c6 682 Gene3D G3DSA:3.30.565.10 504 671 7.2E-35 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS09155 2df73ac2e74c2655391ba151c8e5e0c6 682 Pfam PF17202 Single cache domain 3 207 320 2.5E-26 T 21-04-2016 IPR033463 Single cache domain 3 VFU_RS09155 2df73ac2e74c2655391ba151c8e5e0c6 682 SUPERFAMILY SSF103190 172 313 5.49E-12 T 21-04-2016 IPR029151 Periplasmic sensor domain-like VFU_RS09155 2df73ac2e74c2655391ba151c8e5e0c6 682 Gene3D G3DSA:1.10.287.130 447 503 4.2E-9 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS09155 2df73ac2e74c2655391ba151c8e5e0c6 682 Pfam PF00512 His Kinase A (phospho-acceptor) domain 451 516 2.8E-11 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS09155 2df73ac2e74c2655391ba151c8e5e0c6 682 PANTHER PTHR24423:SF532 342 398 4.7E-200 T 21-04-2016 VFU_RS09155 2df73ac2e74c2655391ba151c8e5e0c6 682 PANTHER PTHR24423:SF532 447 669 4.7E-200 T 21-04-2016 VFU_RS09155 2df73ac2e74c2655391ba151c8e5e0c6 682 PANTHER PTHR24423:SF532 18 286 4.7E-200 T 21-04-2016 VFU_RS09155 2df73ac2e74c2655391ba151c8e5e0c6 682 PANTHER PTHR24423 342 398 4.7E-200 T 21-04-2016 VFU_RS09155 2df73ac2e74c2655391ba151c8e5e0c6 682 PANTHER PTHR24423 18 286 4.7E-200 T 21-04-2016 VFU_RS09155 2df73ac2e74c2655391ba151c8e5e0c6 682 SMART SM00387 561 672 5.7E-28 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS09155 2df73ac2e74c2655391ba151c8e5e0c6 682 PRINTS PR00344 Bacterial sensor protein C-terminal signature 632 650 9.5E-18 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS09155 2df73ac2e74c2655391ba151c8e5e0c6 682 PRINTS PR00344 Bacterial sensor protein C-terminal signature 621 631 9.5E-18 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS09155 2df73ac2e74c2655391ba151c8e5e0c6 682 PRINTS PR00344 Bacterial sensor protein C-terminal signature 603 617 9.5E-18 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS09155 2df73ac2e74c2655391ba151c8e5e0c6 682 PRINTS PR00344 Bacterial sensor protein C-terminal signature 656 669 9.5E-18 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS09155 2df73ac2e74c2655391ba151c8e5e0c6 682 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 565 670 4.1E-19 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS09155 2df73ac2e74c2655391ba151c8e5e0c6 682 Pfam PF00672 HAMP domain 329 398 6.4E-9 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS00430 5833f0c9e4c0a395fd25dd4a94e10d97 546 SUPERFAMILY SSF58104 237 546 3.14E-73 T 21-04-2016 VFU_RS00430 5833f0c9e4c0a395fd25dd4a94e10d97 546 Pfam PF17200 Single Cache domain 2 42 189 1.1E-48 T 21-04-2016 IPR033480 Single Cache domain 2 VFU_RS00430 5833f0c9e4c0a395fd25dd4a94e10d97 546 PANTHER PTHR32089:SF34 75 546 1.0E-134 T 21-04-2016 VFU_RS00430 5833f0c9e4c0a395fd25dd4a94e10d97 546 SMART SM00283 284 545 6.6E-68 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VFU_RS00430 5833f0c9e4c0a395fd25dd4a94e10d97 546 Pfam PF00672 HAMP domain 197 266 6.4E-12 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS00430 5833f0c9e4c0a395fd25dd4a94e10d97 546 Gene3D G3DSA:3.30.450.20 30 185 3.2E-58 T 21-04-2016 VFU_RS00430 5833f0c9e4c0a395fd25dd4a94e10d97 546 SMART SM00304 215 269 4.0E-9 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS00430 5833f0c9e4c0a395fd25dd4a94e10d97 546 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 347 544 1.2E-47 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VFU_RS00430 5833f0c9e4c0a395fd25dd4a94e10d97 546 PANTHER PTHR32089 75 546 1.0E-134 T 21-04-2016 VFU_RS00430 5833f0c9e4c0a395fd25dd4a94e10d97 546 SMART SM01049 38 132 6.3E-41 T 21-04-2016 IPR033480 Single Cache domain 2 VFU_RS00430 5833f0c9e4c0a395fd25dd4a94e10d97 546 Gene3D G3DSA:1.10.287.950 298 515 6.9E-54 T 21-04-2016 VFU_RS10045 7509cb339e9b0525e677e40d53036499 317 Pfam PF00146 NADH dehydrogenase 16 313 1.3E-50 T 21-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 VFU_RS10045 7509cb339e9b0525e677e40d53036499 317 PANTHER PTHR11432 9 317 6.7E-105 T 21-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 VFU_RS10045 7509cb339e9b0525e677e40d53036499 317 PANTHER PTHR11432:SF1 9 317 6.7E-105 T 21-04-2016 VFU_RS05730 5a2ba5a0e71141f6d8bdfa19258fb346 159 PIRSF PIRSF006181 1 159 2.1E-53 T 21-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC VFU_RS05730 5a2ba5a0e71141f6d8bdfa19258fb346 159 SUPERFAMILY SSF55826 2 156 2.62E-45 T 21-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VFU_RS05730 5a2ba5a0e71141f6d8bdfa19258fb346 159 Pfam PF04073 Aminoacyl-tRNA editing domain 32 145 2.9E-25 T 21-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VFU_RS05730 5a2ba5a0e71141f6d8bdfa19258fb346 159 Gene3D G3DSA:3.90.960.10 1 158 2.2E-59 T 21-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VFU_RS05730 5a2ba5a0e71141f6d8bdfa19258fb346 159 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 4.9E-58 T 21-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC VFU_RS05730 5a2ba5a0e71141f6d8bdfa19258fb346 159 PANTHER PTHR30411 1 158 6.1E-69 T 21-04-2016 VFU_RS05730 5a2ba5a0e71141f6d8bdfa19258fb346 159 PANTHER PTHR30411:SF0 1 158 6.1E-69 T 21-04-2016 VFU_RS09990 395fba27aac9fcee469260c51b29ed38 176 PIRSF PIRSF016919 1 176 8.1E-53 T 21-04-2016 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein VFU_RS09990 395fba27aac9fcee469260c51b29ed38 176 Pfam PF04955 HupE / UreJ protein 2 171 1.0E-51 T 21-04-2016 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein VFU_RS01830 a022cd3ad3bea489a7042acd5b2011dd 301 PANTHER PTHR30126:SF18 1 299 5.2E-162 T 21-04-2016 VFU_RS01830 a022cd3ad3bea489a7042acd5b2011dd 301 Gene3D G3DSA:1.10.10.10 6 87 6.4E-24 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS01830 a022cd3ad3bea489a7042acd5b2011dd 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.3E-16 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS01830 a022cd3ad3bea489a7042acd5b2011dd 301 PANTHER PTHR30126 1 299 5.2E-162 T 21-04-2016 VFU_RS01830 a022cd3ad3bea489a7042acd5b2011dd 301 SUPERFAMILY SSF53850 89 289 2.17E-25 T 21-04-2016 VFU_RS01830 a022cd3ad3bea489a7042acd5b2011dd 301 Gene3D G3DSA:3.40.190.10 167 255 1.1E-9 T 21-04-2016 VFU_RS01830 a022cd3ad3bea489a7042acd5b2011dd 301 Pfam PF03466 LysR substrate binding domain 89 288 8.2E-23 T 21-04-2016 IPR005119 LysR, substrate-binding VFU_RS01830 a022cd3ad3bea489a7042acd5b2011dd 301 SUPERFAMILY SSF46785 5 87 2.23E-19 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS02895 96780d4133f7c371dbe6e103c5e320ab 424 SMART SM01274 27 160 3.5E-73 T 21-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VFU_RS02895 96780d4133f7c371dbe6e103c5e320ab 424 Gene3D G3DSA:3.40.50.720 170 419 1.8E-84 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS02895 96780d4133f7c371dbe6e103c5e320ab 424 PANTHER PTHR23406 43 363 1.2E-159 T 21-04-2016 VFU_RS02895 96780d4133f7c371dbe6e103c5e320ab 424 PANTHER PTHR23406 380 424 1.2E-159 T 21-04-2016 VFU_RS02895 96780d4133f7c371dbe6e103c5e320ab 424 SMART SM00919 172 408 2.1E-134 T 21-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 VFU_RS02895 96780d4133f7c371dbe6e103c5e320ab 424 Pfam PF00390 Malic enzyme, N-terminal domain 29 123 2.5E-20 T 21-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VFU_RS02895 96780d4133f7c371dbe6e103c5e320ab 424 SUPERFAMILY SSF51735 172 417 2.8E-79 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS02895 96780d4133f7c371dbe6e103c5e320ab 424 Gene3D G3DSA:3.40.50.10380 19 169 9.7E-49 T 21-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VFU_RS02895 96780d4133f7c371dbe6e103c5e320ab 424 SUPERFAMILY SSF53223 19 170 1.51E-51 T 21-04-2016 VFU_RS02895 96780d4133f7c371dbe6e103c5e320ab 424 ProSitePatterns PS00331 Malic enzymes signature. 168 184 - T 21-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 VFU_RS02895 96780d4133f7c371dbe6e103c5e320ab 424 PIRSF PIRSF000106 52 424 1.1E-70 T 21-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 VFU_RS02895 96780d4133f7c371dbe6e103c5e320ab 424 Pfam PF03949 Malic enzyme, NAD binding domain 174 366 9.8E-25 T 21-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 VFU_RS05315 632d3f3cfb12afa768eb143d3256c48b 379 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 4 378 42.462 T 21-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 VFU_RS05315 632d3f3cfb12afa768eb143d3256c48b 379 Pfam PF02684 Lipid-A-disaccharide synthetase 7 369 3.1E-131 T 21-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 VFU_RS05315 632d3f3cfb12afa768eb143d3256c48b 379 PANTHER PTHR30372:SF0 2 378 1.2E-132 T 21-04-2016 VFU_RS05315 632d3f3cfb12afa768eb143d3256c48b 379 PANTHER PTHR30372 2 378 1.2E-132 T 21-04-2016 VFU_RS05315 632d3f3cfb12afa768eb143d3256c48b 379 SUPERFAMILY SSF53756 6 377 2.06E-27 T 21-04-2016 VFU_RS05315 632d3f3cfb12afa768eb143d3256c48b 379 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 3 376 3.7E-142 T 21-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 VFU_RS05315 632d3f3cfb12afa768eb143d3256c48b 379 Gene3D G3DSA:3.40.50.2000 162 348 5.7E-5 T 21-04-2016 VFU_RS06140 c8a22921a33a95b42d9e0e2a517b873f 936 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 51 4.8E-14 T 21-04-2016 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VFU_RS06140 c8a22921a33a95b42d9e0e2a517b873f 936 SUPERFAMILY SSF52518 122 546 4.27E-88 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold VFU_RS06140 c8a22921a33a95b42d9e0e2a517b873f 936 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 933 0.0 T 21-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VFU_RS06140 c8a22921a33a95b42d9e0e2a517b873f 936 Pfam PF02779 Transketolase, pyrimidine binding domain 594 788 9.8E-66 T 21-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain VFU_RS06140 c8a22921a33a95b42d9e0e2a517b873f 936 PANTHER PTHR23152 5 935 0.0 T 21-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VFU_RS06140 c8a22921a33a95b42d9e0e2a517b873f 936 SUPERFAMILY SSF52518 577 794 1.68E-52 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold VFU_RS06140 c8a22921a33a95b42d9e0e2a517b873f 936 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 792 933 1.0E-55 T 21-04-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VFU_RS06140 c8a22921a33a95b42d9e0e2a517b873f 936 Gene3D G3DSA:3.40.50.970 594 790 6.3E-26 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold VFU_RS06140 c8a22921a33a95b42d9e0e2a517b873f 936 PANTHER PTHR23152:SF4 5 935 0.0 T 21-04-2016 VFU_RS06140 c8a22921a33a95b42d9e0e2a517b873f 936 PIRSF PIRSF000157 1 935 0.0 T 21-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VFU_RS06140 c8a22921a33a95b42d9e0e2a517b873f 936 SMART SM00861 594 787 3.3E-62 T 21-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain VFU_RS06140 c8a22921a33a95b42d9e0e2a517b873f 936 Pfam PF00676 Dehydrogenase E1 component 221 514 4.5E-49 T 21-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 VFU_RS06140 c8a22921a33a95b42d9e0e2a517b873f 936 Gene3D G3DSA:3.40.50.970 163 557 1.6E-79 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold VFU_RS06155 d50e30e477b6fc79859a313c8b1e0344 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 21-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 VFU_RS06155 d50e30e477b6fc79859a313c8b1e0344 290 Gene3D G3DSA:3.40.50.720 2 119 1.5E-56 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS06155 d50e30e477b6fc79859a313c8b1e0344 290 SUPERFAMILY SSF52210 123 286 1.1E-56 T 21-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 VFU_RS06155 d50e30e477b6fc79859a313c8b1e0344 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 2.5E-40 T 21-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 VFU_RS06155 d50e30e477b6fc79859a313c8b1e0344 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 2.5E-40 T 21-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 VFU_RS06155 d50e30e477b6fc79859a313c8b1e0344 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 2.5E-40 T 21-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 VFU_RS06155 d50e30e477b6fc79859a313c8b1e0344 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 2.5E-40 T 21-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 VFU_RS06155 d50e30e477b6fc79859a313c8b1e0344 290 Pfam PF02629 CoA binding domain 6 99 5.0E-31 T 21-04-2016 IPR003781 CoA-binding GO:0048037 VFU_RS06155 d50e30e477b6fc79859a313c8b1e0344 290 SMART SM00881 4 100 6.0E-36 T 21-04-2016 IPR003781 CoA-binding GO:0048037 VFU_RS06155 d50e30e477b6fc79859a313c8b1e0344 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 287 5.0E-146 T 21-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 VFU_RS06155 d50e30e477b6fc79859a313c8b1e0344 290 Pfam PF00549 CoA-ligase 151 270 1.0E-21 T 21-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 VFU_RS06155 d50e30e477b6fc79859a313c8b1e0344 290 PANTHER PTHR11117 1 287 2.8E-198 T 21-04-2016 VFU_RS06155 d50e30e477b6fc79859a313c8b1e0344 290 SUPERFAMILY SSF51735 1 122 4.19E-43 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS06155 d50e30e477b6fc79859a313c8b1e0344 290 Gene3D G3DSA:3.40.50.261 120 287 3.2E-78 T 21-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 VFU_RS06155 d50e30e477b6fc79859a313c8b1e0344 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 21-04-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site VFU_RS06155 d50e30e477b6fc79859a313c8b1e0344 290 PIRSF PIRSF001553 1 289 3.3E-134 T 21-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 VFU_RS03100 eaf20020cb3528f955c2aa9d5ccd942b 826 Pfam PF00912 Transglycosylase 55 229 2.7E-63 T 21-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 VFU_RS03100 eaf20020cb3528f955c2aa9d5ccd942b 826 Gene3D G3DSA:3.40.710.10 232 313 1.3E-127 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VFU_RS03100 eaf20020cb3528f955c2aa9d5ccd942b 826 Gene3D G3DSA:3.40.710.10 428 810 1.3E-127 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VFU_RS03100 eaf20020cb3528f955c2aa9d5ccd942b 826 Pfam PF00905 Penicillin binding protein transpeptidase domain 434 699 2.1E-30 T 21-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VFU_RS03100 eaf20020cb3528f955c2aa9d5ccd942b 826 Gene3D G3DSA:1.10.3810.10 55 231 1.7E-74 T 21-04-2016 VFU_RS03100 eaf20020cb3528f955c2aa9d5ccd942b 826 SUPERFAMILY SSF53955 43 255 1.15E-77 T 21-04-2016 IPR023346 Lysozyme-like domain VFU_RS03100 eaf20020cb3528f955c2aa9d5ccd942b 826 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 732 2.9E-170 T 21-04-2016 VFU_RS03100 eaf20020cb3528f955c2aa9d5ccd942b 826 PANTHER PTHR32282 427 618 1.3E-273 T 21-04-2016 VFU_RS03100 eaf20020cb3528f955c2aa9d5ccd942b 826 PANTHER PTHR32282 741 811 1.3E-273 T 21-04-2016 VFU_RS03100 eaf20020cb3528f955c2aa9d5ccd942b 826 SUPERFAMILY SSF56601 211 233 1.51E-114 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VFU_RS03100 eaf20020cb3528f955c2aa9d5ccd942b 826 SUPERFAMILY SSF56601 428 810 1.51E-114 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VFU_RS03100 eaf20020cb3528f955c2aa9d5ccd942b 826 SUPERFAMILY SSF56601 262 313 1.51E-114 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VFU_RS03100 eaf20020cb3528f955c2aa9d5ccd942b 826 Pfam PF17092 Penicillin-binding protein OB-like domain 316 431 2.7E-32 T 21-04-2016 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00230+2.4.2.-|KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00514+2.4.2.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.-|UniPathway: UPA00219 VFU_RS03100 eaf20020cb3528f955c2aa9d5ccd942b 826 Gene3D G3DSA:2.40.50.140 348 427 5.3E-20 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS03100 eaf20020cb3528f955c2aa9d5ccd942b 826 PANTHER PTHR32282 641 725 1.3E-273 T 21-04-2016 VFU_RS03100 eaf20020cb3528f955c2aa9d5ccd942b 826 PANTHER PTHR32282:SF5 641 725 1.3E-273 T 21-04-2016 VFU_RS03100 eaf20020cb3528f955c2aa9d5ccd942b 826 PANTHER PTHR32282:SF5 741 811 1.3E-273 T 21-04-2016 VFU_RS03100 eaf20020cb3528f955c2aa9d5ccd942b 826 PANTHER PTHR32282:SF5 2 310 1.3E-273 T 21-04-2016 VFU_RS03100 eaf20020cb3528f955c2aa9d5ccd942b 826 PANTHER PTHR32282 2 310 1.3E-273 T 21-04-2016 VFU_RS03100 eaf20020cb3528f955c2aa9d5ccd942b 826 PANTHER PTHR32282:SF5 427 618 1.3E-273 T 21-04-2016 VFU_RS06350 668b25452b61858484c86231b91e4879 650 Gene3D G3DSA:2.70.20.10 374 493 2.3E-42 T 21-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 VFU_RS06350 668b25452b61858484c86231b91e4879 650 Gene3D G3DSA:2.70.20.10 219 256 2.3E-42 T 21-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 VFU_RS06350 668b25452b61858484c86231b91e4879 650 SUPERFAMILY SSF56712 3 612 7.32E-182 T 21-04-2016 IPR023405 DNA topoisomerase, type IA, core domain VFU_RS06350 668b25452b61858484c86231b91e4879 650 Pfam PF01131 DNA topoisomerase 159 598 7.2E-116 T 21-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VFU_RS06350 668b25452b61858484c86231b91e4879 650 Hamap MF_00953 DNA topoisomerase 3 [topB]. 2 647 66.057 T 21-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 VFU_RS06350 668b25452b61858484c86231b91e4879 650 SMART SM00493 2 125 4.5E-27 T 21-04-2016 IPR006171 Toprim domain VFU_RS06350 668b25452b61858484c86231b91e4879 650 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 321 336 - T 21-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 VFU_RS06350 668b25452b61858484c86231b91e4879 650 Gene3D G3DSA:1.10.460.10 495 612 2.7E-52 T 21-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VFU_RS06350 668b25452b61858484c86231b91e4879 650 Gene3D G3DSA:1.10.460.10 160 218 2.7E-52 T 21-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VFU_RS06350 668b25452b61858484c86231b91e4879 650 SMART SM00436 129 224 8.7E-30 T 21-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 VFU_RS06350 668b25452b61858484c86231b91e4879 650 Pfam PF01751 Toprim domain 4 124 5.2E-16 T 21-04-2016 IPR006171 Toprim domain VFU_RS06350 668b25452b61858484c86231b91e4879 650 Gene3D G3DSA:3.40.50.140 3 154 1.9E-44 T 21-04-2016 IPR006171 Toprim domain VFU_RS06350 668b25452b61858484c86231b91e4879 650 PANTHER PTHR11390:SF21 1 508 8.8E-182 T 21-04-2016 VFU_RS06350 668b25452b61858484c86231b91e4879 650 PANTHER PTHR11390:SF21 526 611 8.8E-182 T 21-04-2016 VFU_RS06350 668b25452b61858484c86231b91e4879 650 SMART SM00437 284 563 2.8E-90 T 21-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 VFU_RS06350 668b25452b61858484c86231b91e4879 650 PANTHER PTHR11390 1 508 8.8E-182 T 21-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VFU_RS06350 668b25452b61858484c86231b91e4879 650 PANTHER PTHR11390 526 611 8.8E-182 T 21-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VFU_RS06350 668b25452b61858484c86231b91e4879 650 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 627 2.5E-237 T 21-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 VFU_RS06350 668b25452b61858484c86231b91e4879 650 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 408 424 1.21328E-26 T 21-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VFU_RS06350 668b25452b61858484c86231b91e4879 650 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 526 540 1.21328E-26 T 21-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VFU_RS06350 668b25452b61858484c86231b91e4879 650 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 99 112 1.21328E-26 T 21-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VFU_RS06350 668b25452b61858484c86231b91e4879 650 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 194 212 1.21328E-26 T 21-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VFU_RS06350 668b25452b61858484c86231b91e4879 650 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 327 336 1.21328E-26 T 21-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VFU_RS07695 45838f01e19f8775b9290a9b3ca0592c 275 Pfam PF00005 ABC transporter 25 166 4.0E-31 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS07695 45838f01e19f8775b9290a9b3ca0592c 275 PANTHER PTHR24220 7 258 3.3E-119 T 21-04-2016 VFU_RS07695 45838f01e19f8775b9290a9b3ca0592c 275 PANTHER PTHR24220:SF361 7 258 3.3E-119 T 21-04-2016 VFU_RS07695 45838f01e19f8775b9290a9b3ca0592c 275 SUPERFAMILY SSF52540 6 233 3.75E-69 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS07695 45838f01e19f8775b9290a9b3ca0592c 275 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS07695 45838f01e19f8775b9290a9b3ca0592c 275 SMART SM00382 34 216 3.2E-19 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS07695 45838f01e19f8775b9290a9b3ca0592c 275 Gene3D G3DSA:3.40.50.300 5 222 3.9E-65 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS07695 45838f01e19f8775b9290a9b3ca0592c 275 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 25 254 4.5E-107 T 21-04-2016 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 VFU_RS11515 3da21e2f810fc47358fc892500427991 256 Pfam PF00005 ABC transporter 22 181 6.0E-32 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS11515 3da21e2f810fc47358fc892500427991 256 SMART SM00382 31 229 6.0E-15 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS11515 3da21e2f810fc47358fc892500427991 256 PANTHER PTHR24220:SF472 8 255 3.2E-162 T 21-04-2016 VFU_RS11515 3da21e2f810fc47358fc892500427991 256 SUPERFAMILY SSF52540 7 251 3.8E-75 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS11515 3da21e2f810fc47358fc892500427991 256 Gene3D G3DSA:3.40.50.300 6 253 2.0E-80 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS11515 3da21e2f810fc47358fc892500427991 256 PIRSF PIRSF039085 3 256 4.7E-118 T 21-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VFU_RS11515 3da21e2f810fc47358fc892500427991 256 PANTHER PTHR24220 8 255 3.2E-162 T 21-04-2016 VFU_RS11515 3da21e2f810fc47358fc892500427991 256 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS05190 b95074d97d73c8c402d3e8c6f9a52e58 416 Gene3D G3DSA:3.40.605.10 374 412 1.8E-99 T 21-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 VFU_RS05190 b95074d97d73c8c402d3e8c6f9a52e58 416 Gene3D G3DSA:3.40.605.10 6 221 1.8E-99 T 21-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 VFU_RS05190 b95074d97d73c8c402d3e8c6f9a52e58 416 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 322 343 - T 21-04-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 VFU_RS05190 b95074d97d73c8c402d3e8c6f9a52e58 416 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 10 405 1.3E-164 T 21-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 VFU_RS05190 b95074d97d73c8c402d3e8c6f9a52e58 416 Gene3D G3DSA:3.40.309.10 224 373 1.5E-34 T 21-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 VFU_RS05190 b95074d97d73c8c402d3e8c6f9a52e58 416 Pfam PF00171 Aldehyde dehydrogenase family 8 279 1.1E-14 T 21-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 VFU_RS05190 b95074d97d73c8c402d3e8c6f9a52e58 416 SUPERFAMILY SSF53720 5 408 6.02E-110 T 21-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 VFU_RS05190 b95074d97d73c8c402d3e8c6f9a52e58 416 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 2 415 38.582 T 21-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 VFU_RS05190 b95074d97d73c8c402d3e8c6f9a52e58 416 PANTHER PTHR11063:SF8 6 411 2.4E-177 T 21-04-2016 VFU_RS05190 b95074d97d73c8c402d3e8c6f9a52e58 416 PANTHER PTHR11063 6 411 2.4E-177 T 21-04-2016 VFU_RS05190 b95074d97d73c8c402d3e8c6f9a52e58 416 PIRSF PIRSF000151 2 416 4.4E-163 T 21-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 VFU_RS10795 9cd87c1239cbf4cc03f19cc1704cc915 130 Gene3D G3DSA:3.30.1330.40 17 127 1.4E-30 T 21-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like VFU_RS10795 9cd87c1239cbf4cc03f19cc1704cc915 130 Pfam PF01042 Endoribonuclease L-PSP 20 123 1.3E-22 T 21-04-2016 IPR006175 YjgF/YER057c/UK114 family VFU_RS10795 9cd87c1239cbf4cc03f19cc1704cc915 130 PANTHER PTHR11803 20 130 6.3E-28 T 21-04-2016 IPR006175 YjgF/YER057c/UK114 family VFU_RS10795 9cd87c1239cbf4cc03f19cc1704cc915 130 SUPERFAMILY SSF55298 18 127 2.36E-31 T 21-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like VFU_RS02915 d3920b94a8f599b0520308cd41a0c13e 183 Gene3D G3DSA:3.30.70.1070 105 180 3.3E-25 T 21-04-2016 IPR007730 Sporulation-related domain GO:0042834 VFU_RS02915 d3920b94a8f599b0520308cd41a0c13e 183 SUPERFAMILY SSF110997 108 179 1.83E-16 T 21-04-2016 IPR007730 Sporulation-related domain GO:0042834 VFU_RS02915 d3920b94a8f599b0520308cd41a0c13e 183 Pfam PF05036 Sporulation related domain 109 178 5.2E-13 T 21-04-2016 IPR007730 Sporulation-related domain GO:0042834 VFU_RS05895 ac049411001c149290c4e07091d672ec 667 PANTHER PTHR30288:SF0 1 389 2.9E-99 T 21-04-2016 VFU_RS05895 ac049411001c149290c4e07091d672ec 667 PANTHER PTHR30288:SF0 424 665 2.9E-99 T 21-04-2016 VFU_RS05895 ac049411001c149290c4e07091d672ec 667 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 431 656 2.3E-53 T 21-04-2016 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 VFU_RS05895 ac049411001c149290c4e07091d672ec 667 PANTHER PTHR30288 1 389 2.9E-99 T 21-04-2016 VFU_RS05895 ac049411001c149290c4e07091d672ec 667 PANTHER PTHR30288 424 665 2.9E-99 T 21-04-2016 VFU_RS05895 ac049411001c149290c4e07091d672ec 667 Pfam PF07196 Flagellin hook IN motif 125 177 8.9E-7 T 21-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VFU_RS05895 ac049411001c149290c4e07091d672ec 667 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 10 107 9.9E-21 T 21-04-2016 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 VFU_RS07520 c369e4e0f8d46b6ea09d212f3d3d5e3a 85 Hamap MF_01217 Acyl carrier protein [acpP]. 8 82 14.193 T 21-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 VFU_RS07520 c369e4e0f8d46b6ea09d212f3d3d5e3a 85 Pfam PF00550 Phosphopantetheine attachment site 11 78 6.8E-14 T 21-04-2016 IPR009081 Phosphopantetheine binding ACP domain VFU_RS07520 c369e4e0f8d46b6ea09d212f3d3d5e3a 85 SUPERFAMILY SSF47336 5 83 3.01E-20 T 21-04-2016 IPR009081 Phosphopantetheine binding ACP domain VFU_RS07520 c369e4e0f8d46b6ea09d212f3d3d5e3a 85 Gene3D G3DSA:1.10.1200.10 5 83 3.2E-20 T 21-04-2016 IPR009081 Phosphopantetheine binding ACP domain VFU_RS15065 157f1c0d24a6db8a4b2cd3f695bab54a 145 PRINTS PR01438 Universal stress protein signature 2 20 3.4E-12 T 21-04-2016 IPR006015 Universal stress protein A VFU_RS15065 157f1c0d24a6db8a4b2cd3f695bab54a 145 PRINTS PR01438 Universal stress protein signature 120 142 3.4E-12 T 21-04-2016 IPR006015 Universal stress protein A VFU_RS15065 157f1c0d24a6db8a4b2cd3f695bab54a 145 PRINTS PR01438 Universal stress protein signature 102 114 3.4E-12 T 21-04-2016 IPR006015 Universal stress protein A VFU_RS15065 157f1c0d24a6db8a4b2cd3f695bab54a 145 SUPERFAMILY SSF52402 2 143 2.98E-39 T 21-04-2016 VFU_RS15065 157f1c0d24a6db8a4b2cd3f695bab54a 145 PANTHER PTHR31964 1 144 8.8E-33 T 21-04-2016 VFU_RS15065 157f1c0d24a6db8a4b2cd3f695bab54a 145 Gene3D G3DSA:3.40.50.620 1 144 5.9E-41 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VFU_RS15065 157f1c0d24a6db8a4b2cd3f695bab54a 145 PIRSF PIRSF006276 1 145 8.8E-22 T 21-04-2016 IPR006015 Universal stress protein A VFU_RS15065 157f1c0d24a6db8a4b2cd3f695bab54a 145 Pfam PF00582 Universal stress protein family 1 142 1.6E-35 T 21-04-2016 IPR006016 UspA GO:0006950 VFU_RS15065 157f1c0d24a6db8a4b2cd3f695bab54a 145 PANTHER PTHR31964:SF42 1 144 8.8E-33 T 21-04-2016 VFU_RS05335 ebe1a0ddcdf36718042eae50e7afd242 432 Pfam PF09179 TilS substrate binding domain 245 312 7.1E-21 T 21-04-2016 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VFU_RS05335 ebe1a0ddcdf36718042eae50e7afd242 432 Gene3D G3DSA:3.40.50.620 9 176 1.8E-11 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VFU_RS05335 ebe1a0ddcdf36718042eae50e7afd242 432 PANTHER PTHR11807:SF2 14 425 3.4E-85 T 21-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VFU_RS05335 ebe1a0ddcdf36718042eae50e7afd242 432 Pfam PF01171 PP-loop family 19 196 2.5E-59 T 21-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal VFU_RS05335 ebe1a0ddcdf36718042eae50e7afd242 432 Pfam PF11734 TilS substrate C-terminal domain 363 430 1.0E-20 T 21-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VFU_RS05335 ebe1a0ddcdf36718042eae50e7afd242 432 SUPERFAMILY SSF52402 15 229 7.06E-59 T 21-04-2016 VFU_RS05335 ebe1a0ddcdf36718042eae50e7afd242 432 PANTHER PTHR11807 14 425 3.4E-85 T 21-04-2016 VFU_RS05335 ebe1a0ddcdf36718042eae50e7afd242 432 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 361 406 1.5E-15 T 21-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VFU_RS05335 ebe1a0ddcdf36718042eae50e7afd242 432 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 7 304 23.531 T 21-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VFU_RS05335 ebe1a0ddcdf36718042eae50e7afd242 432 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 19 200 4.5E-53 T 21-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VFU_RS05335 ebe1a0ddcdf36718042eae50e7afd242 432 SUPERFAMILY SSF56037 320 430 3.92E-25 T 21-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 VFU_RS05335 ebe1a0ddcdf36718042eae50e7afd242 432 SMART SM00977 361 430 4.6E-22 T 21-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VFU_RS05335 ebe1a0ddcdf36718042eae50e7afd242 432 SUPERFAMILY SSF82829 232 315 2.22E-25 T 21-04-2016 VFU_RS13945 10f867742c760b6caac1b86325a9736e 695 TIGRFAM TIGR00484 EF-G: translation elongation factor G 3 689 8.6E-290 T 21-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 VFU_RS13945 10f867742c760b6caac1b86325a9736e 695 SMART SM00838 597 684 3.1E-46 T 21-04-2016 IPR000640 Translation elongation factor EFG, V domain VFU_RS13945 10f867742c760b6caac1b86325a9736e 695 Pfam PF00009 Elongation factor Tu GTP binding domain 6 278 3.5E-62 T 21-04-2016 VFU_RS13945 10f867742c760b6caac1b86325a9736e 695 Hamap MF_00054_B Elongation factor G [fusA]. 3 688 99.576 T 21-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 VFU_RS13945 10f867742c760b6caac1b86325a9736e 695 Pfam PF14492 Elongation Factor G, domain II 401 474 3.2E-29 T 21-04-2016 IPR009022 Elongation factor G, III-V domain VFU_RS13945 10f867742c760b6caac1b86325a9736e 695 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 175 5.9E-25 T 21-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VFU_RS13945 10f867742c760b6caac1b86325a9736e 695 SUPERFAMILY SSF50447 261 399 3.53E-32 T 21-04-2016 IPR009000 Translation protein, beta-barrel domain VFU_RS13945 10f867742c760b6caac1b86325a9736e 695 SUPERFAMILY SSF54211 476 595 1.95E-39 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VFU_RS13945 10f867742c760b6caac1b86325a9736e 695 Gene3D G3DSA:3.30.70.240 597 682 4.7E-31 T 21-04-2016 IPR000640 Translation elongation factor EFG, V domain VFU_RS13945 10f867742c760b6caac1b86325a9736e 695 SUPERFAMILY SSF54980 401 478 6.47E-21 T 21-04-2016 IPR009022 Elongation factor G, III-V domain VFU_RS13945 10f867742c760b6caac1b86325a9736e 695 SUPERFAMILY SSF54980 600 689 6.12E-28 T 21-04-2016 IPR009022 Elongation factor G, III-V domain VFU_RS13945 10f867742c760b6caac1b86325a9736e 695 Gene3D G3DSA:3.30.70.870 403 477 9.9E-32 T 21-04-2016 VFU_RS13945 10f867742c760b6caac1b86325a9736e 695 PRINTS PR00315 GTP-binding elongation factor signature 75 85 4.8E-14 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VFU_RS13945 10f867742c760b6caac1b86325a9736e 695 PRINTS PR00315 GTP-binding elongation factor signature 127 136 4.8E-14 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VFU_RS13945 10f867742c760b6caac1b86325a9736e 695 PRINTS PR00315 GTP-binding elongation factor signature 9 22 4.8E-14 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VFU_RS13945 10f867742c760b6caac1b86325a9736e 695 PRINTS PR00315 GTP-binding elongation factor signature 55 63 4.8E-14 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VFU_RS13945 10f867742c760b6caac1b86325a9736e 695 Pfam PF03764 Elongation factor G, domain IV 476 594 8.8E-44 T 21-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VFU_RS13945 10f867742c760b6caac1b86325a9736e 695 Gene3D G3DSA:3.30.230.10 481 596 8.4E-44 T 21-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VFU_RS13945 10f867742c760b6caac1b86325a9736e 695 SMART SM00889 477 595 6.5E-62 T 21-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VFU_RS13945 10f867742c760b6caac1b86325a9736e 695 PANTHER PTHR23115 301 688 0.0 T 21-04-2016 VFU_RS13945 10f867742c760b6caac1b86325a9736e 695 PANTHER PTHR23115 3 174 0.0 T 21-04-2016 VFU_RS13945 10f867742c760b6caac1b86325a9736e 695 PANTHER PTHR23115 251 279 0.0 T 21-04-2016 VFU_RS13945 10f867742c760b6caac1b86325a9736e 695 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 21-04-2016 IPR031157 Tr-type G domain, conserved site VFU_RS13945 10f867742c760b6caac1b86325a9736e 695 Pfam PF03144 Elongation factor Tu domain 2 321 388 1.0E-15 T 21-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 VFU_RS13945 10f867742c760b6caac1b86325a9736e 695 SUPERFAMILY SSF52540 3 278 6.25E-98 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS13945 10f867742c760b6caac1b86325a9736e 695 PANTHER PTHR23115:SF154 301 688 0.0 T 21-04-2016 VFU_RS13945 10f867742c760b6caac1b86325a9736e 695 PANTHER PTHR23115:SF154 3 174 0.0 T 21-04-2016 VFU_RS13945 10f867742c760b6caac1b86325a9736e 695 PANTHER PTHR23115:SF154 251 279 0.0 T 21-04-2016 VFU_RS13945 10f867742c760b6caac1b86325a9736e 695 Gene3D G3DSA:2.40.30.10 303 402 2.4E-35 T 21-04-2016 VFU_RS13945 10f867742c760b6caac1b86325a9736e 695 Pfam PF00679 Elongation factor G C-terminus 597 683 4.4E-28 T 21-04-2016 IPR000640 Translation elongation factor EFG, V domain VFU_RS13945 10f867742c760b6caac1b86325a9736e 695 Gene3D G3DSA:3.40.50.300 2 283 5.3E-96 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS11510 8f609b2dfe2ce042a8b1a13b6b0b5dfe 258 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 6 251 7.1E-88 T 21-04-2016 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 VFU_RS11510 8f609b2dfe2ce042a8b1a13b6b0b5dfe 258 SMART SM00062 26 254 8.7E-71 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VFU_RS11510 8f609b2dfe2ce042a8b1a13b6b0b5dfe 258 PANTHER PTHR18966:SF152 5 251 4.9E-61 T 21-04-2016 VFU_RS11510 8f609b2dfe2ce042a8b1a13b6b0b5dfe 258 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 49 62 - T 21-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 VFU_RS11510 8f609b2dfe2ce042a8b1a13b6b0b5dfe 258 Gene3D G3DSA:3.40.190.10 213 255 2.8E-46 T 21-04-2016 VFU_RS11510 8f609b2dfe2ce042a8b1a13b6b0b5dfe 258 Gene3D G3DSA:3.40.190.10 23 112 2.8E-46 T 21-04-2016 VFU_RS11510 8f609b2dfe2ce042a8b1a13b6b0b5dfe 258 SMART SM00079 26 253 1.6E-4 T 21-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 VFU_RS11510 8f609b2dfe2ce042a8b1a13b6b0b5dfe 258 PANTHER PTHR18966 5 251 4.9E-61 T 21-04-2016 VFU_RS11510 8f609b2dfe2ce042a8b1a13b6b0b5dfe 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 252 2.8E-63 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VFU_RS11510 8f609b2dfe2ce042a8b1a13b6b0b5dfe 258 Gene3D G3DSA:3.40.190.10 115 211 1.4E-25 T 21-04-2016 VFU_RS11510 8f609b2dfe2ce042a8b1a13b6b0b5dfe 258 SUPERFAMILY SSF53850 1 255 5.98E-72 T 21-04-2016 VFU_RS08935 07391cebb7ee6a61249451a2fd64280c 357 PANTHER PTHR11959 1 355 3.0E-138 T 21-04-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 VFU_RS08935 07391cebb7ee6a61249451a2fd64280c 357 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 6 143 1.7E-57 T 21-04-2016 VFU_RS08935 07391cebb7ee6a61249451a2fd64280c 357 SUPERFAMILY SSF54593 6 341 4.47E-79 T 21-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VFU_RS08935 07391cebb7ee6a61249451a2fd64280c 357 Gene3D G3DSA:3.10.180.10 5 146 1.3E-44 T 21-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VFU_RS08935 07391cebb7ee6a61249451a2fd64280c 357 Gene3D G3DSA:3.10.180.10 159 354 8.9E-73 T 21-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VFU_RS08935 07391cebb7ee6a61249451a2fd64280c 357 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 163 274 1.0E-14 T 21-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VFU_RS08935 07391cebb7ee6a61249451a2fd64280c 357 PIRSF PIRSF009283 1 355 1.8E-125 T 21-04-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 VFU_RS08935 07391cebb7ee6a61249451a2fd64280c 357 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 12 354 4.4E-133 T 21-04-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 VFU_RS08935 07391cebb7ee6a61249451a2fd64280c 357 PANTHER PTHR11959:SF1 1 355 3.0E-138 T 21-04-2016 VFU_RS12555 a47225804e8e4d50727120a6a4777886 212 Pfam PF04205 FMN-binding domain 100 187 1.5E-20 T 21-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 VFU_RS12555 a47225804e8e4d50727120a6a4777886 212 Hamap MF_00479 Electron transport complex subunit RsxG [rsxG]. 2 194 25.65 T 21-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 VFU_RS12555 a47225804e8e4d50727120a6a4777886 212 SMART SM00900 100 192 2.5E-33 T 21-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 VFU_RS12555 a47225804e8e4d50727120a6a4777886 212 PIRSF PIRSF006091 1 206 1.1E-75 T 21-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 VFU_RS12555 a47225804e8e4d50727120a6a4777886 212 PANTHER PTHR36118 1 211 2.3E-69 T 21-04-2016 VFU_RS12555 a47225804e8e4d50727120a6a4777886 212 PANTHER PTHR36118:SF1 1 211 2.3E-69 T 21-04-2016 VFU_RS12555 a47225804e8e4d50727120a6a4777886 212 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 193 8.5E-64 T 21-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 VFU_RS00730 33f17349c2e75286ec09f8c77dbb385d 313 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 311 2.7E-126 T 21-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 VFU_RS00730 33f17349c2e75286ec09f8c77dbb385d 313 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 313 54.729 T 21-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 VFU_RS00730 33f17349c2e75286ec09f8c77dbb385d 313 Gene3D G3DSA:3.40.50.720 2 176 3.3E-18 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS00730 33f17349c2e75286ec09f8c77dbb385d 313 SUPERFAMILY SSF51735 1 308 7.74E-59 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS00730 33f17349c2e75286ec09f8c77dbb385d 313 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 241 1.9E-46 T 21-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 VFU_RS00730 33f17349c2e75286ec09f8c77dbb385d 313 PANTHER PTHR10366:SF469 1 313 2.9E-114 T 21-04-2016 VFU_RS00730 33f17349c2e75286ec09f8c77dbb385d 313 Gene3D G3DSA:3.90.25.10 177 294 6.2E-38 T 21-04-2016 VFU_RS00730 33f17349c2e75286ec09f8c77dbb385d 313 PANTHER PTHR10366 1 313 2.9E-114 T 21-04-2016 VFU_RS07150 a12b1402ff5c8098a5c9a9c9ab958312 124 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 74 85 - T 21-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 VFU_RS07150 a12b1402ff5c8098a5c9a9c9ab958312 124 Gene3D G3DSA:1.10.3830.10 8 122 3.8E-36 T 21-04-2016 VFU_RS07150 a12b1402ff5c8098a5c9a9c9ab958312 124 PANTHER PTHR34299 1 122 3.5E-29 T 21-04-2016 VFU_RS07150 a12b1402ff5c8098a5c9a9c9ab958312 124 Pfam PF01219 Prokaryotic diacylglycerol kinase 21 121 4.7E-30 T 21-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 VFU_RS07150 a12b1402ff5c8098a5c9a9c9ab958312 124 PANTHER PTHR34299:SF1 1 122 3.5E-29 T 21-04-2016 VFU_RS14580 ff2a1ac052a0e61942c12b34dc5fa7ab 581 SMART SM00766 451 576 5.5E-55 T 21-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 VFU_RS14580 ff2a1ac052a0e61942c12b34dc5fa7ab 581 PANTHER PTHR30313 3 579 1.9E-160 T 21-04-2016 VFU_RS14580 ff2a1ac052a0e61942c12b34dc5fa7ab 581 Gene3D G3DSA:1.10.860.10 438 580 1.8E-54 T 21-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal VFU_RS14580 ff2a1ac052a0e61942c12b34dc5fa7ab 581 Gene3D G3DSA:3.90.980.10 122 246 1.2E-46 T 21-04-2016 IPR013264 DNA primase, catalytic core, N-terminal VFU_RS14580 ff2a1ac052a0e61942c12b34dc5fa7ab 581 SMART SM00400 36 90 2.0E-36 T 21-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 VFU_RS14580 ff2a1ac052a0e61942c12b34dc5fa7ab 581 Gene3D G3DSA:3.40.1360.10 247 372 1.4E-45 T 21-04-2016 VFU_RS14580 ff2a1ac052a0e61942c12b34dc5fa7ab 581 Pfam PF13155 Toprim-like 269 355 2.3E-14 T 21-04-2016 VFU_RS14580 ff2a1ac052a0e61942c12b34dc5fa7ab 581 SUPERFAMILY SSF57783 4 101 6.97E-37 T 21-04-2016 VFU_RS14580 ff2a1ac052a0e61942c12b34dc5fa7ab 581 SMART SM00493 265 336 1.1E-19 T 21-04-2016 IPR006171 Toprim domain VFU_RS14580 ff2a1ac052a0e61942c12b34dc5fa7ab 581 Pfam PF01807 CHC2 zinc finger 6 101 3.6E-40 T 21-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 VFU_RS14580 ff2a1ac052a0e61942c12b34dc5fa7ab 581 TIGRFAM TIGR01391 dnaG: DNA primase 5 424 4.8E-149 T 21-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 VFU_RS14580 ff2a1ac052a0e61942c12b34dc5fa7ab 581 Gene3D G3DSA:1.20.50.20 374 428 4.6E-18 T 21-04-2016 VFU_RS14580 ff2a1ac052a0e61942c12b34dc5fa7ab 581 Hamap MF_00974 DNA primase [dnaG]. 4 577 29.378 T 21-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 VFU_RS14580 ff2a1ac052a0e61942c12b34dc5fa7ab 581 Gene3D G3DSA:3.90.580.10 2 101 5.4E-42 T 21-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 VFU_RS14580 ff2a1ac052a0e61942c12b34dc5fa7ab 581 SUPERFAMILY SSF56731 122 429 6.28E-113 T 21-04-2016 VFU_RS14580 ff2a1ac052a0e61942c12b34dc5fa7ab 581 Pfam PF08275 DNA primase catalytic core, N-terminal domain 132 256 3.1E-42 T 21-04-2016 IPR013264 DNA primase, catalytic core, N-terminal VFU_RS14580 ff2a1ac052a0e61942c12b34dc5fa7ab 581 SUPERFAMILY SSF117023 448 580 1.44E-44 T 21-04-2016 VFU_RS14580 ff2a1ac052a0e61942c12b34dc5fa7ab 581 Pfam PF08278 DNA primase DnaG DnaB-binding 452 575 2.1E-35 T 21-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 VFU_RS14580 ff2a1ac052a0e61942c12b34dc5fa7ab 581 Pfam PF10410 DnaB-helicase binding domain of primase 376 427 5.5E-11 T 21-04-2016 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 VFU_RS14580 ff2a1ac052a0e61942c12b34dc5fa7ab 581 PIRSF PIRSF002811 2 580 5.9E-144 T 21-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 VFU_RS06795 996024558652065c65fc5bc4e81e4e0c 299 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 182 4.0E-53 T 21-04-2016 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 VFU_RS06795 996024558652065c65fc5bc4e81e4e0c 299 PANTHER PTHR30244 1 299 6.1E-50 T 21-04-2016 VFU_RS06795 996024558652065c65fc5bc4e81e4e0c 299 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 141 1.1E-13 T 21-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VFU_RS06795 996024558652065c65fc5bc4e81e4e0c 299 SUPERFAMILY SSF64518 1 297 2.09E-53 T 21-04-2016 VFU_RS06795 996024558652065c65fc5bc4e81e4e0c 299 Gene3D G3DSA:1.20.1330.10 57 244 6.3E-19 T 21-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VFU_RS06795 996024558652065c65fc5bc4e81e4e0c 299 PANTHER PTHR30244:SF5 1 299 6.1E-50 T 21-04-2016 VFU_RS01495 328fac8caf022522d02f14a080966af6 474 Pfam PF12801 4Fe-4S binding domain 98 137 9.6E-9 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VFU_RS01495 328fac8caf022522d02f14a080966af6 474 Gene3D G3DSA:2.60.40.10 357 472 2.1E-35 T 21-04-2016 IPR013783 Immunoglobulin-like fold VFU_RS01495 328fac8caf022522d02f14a080966af6 474 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 44 472 8.5E-173 T 21-04-2016 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021 VFU_RS01495 328fac8caf022522d02f14a080966af6 474 Gene3D G3DSA:3.30.70.20 284 321 8.8E-7 T 21-04-2016 VFU_RS01495 328fac8caf022522d02f14a080966af6 474 SUPERFAMILY SSF54862 176 350 1.2E-32 T 21-04-2016 VFU_RS01495 328fac8caf022522d02f14a080966af6 474 SUPERFAMILY SSF54862 108 130 1.2E-32 T 21-04-2016 VFU_RS01495 328fac8caf022522d02f14a080966af6 474 Pfam PF13746 4Fe-4S dicluster domain 223 327 2.8E-40 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VFU_RS01495 328fac8caf022522d02f14a080966af6 474 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 275 286 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VFU_RS01495 328fac8caf022522d02f14a080966af6 474 PANTHER PTHR24960 4 396 7.9E-197 T 21-04-2016 VFU_RS01495 328fac8caf022522d02f14a080966af6 474 PANTHER PTHR24960:SF45 4 396 7.9E-197 T 21-04-2016 VFU_RS01495 328fac8caf022522d02f14a080966af6 474 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 359 471 3.4E-28 T 21-04-2016 IPR032879 FixG, C-terminal immunoglobulin-like domain VFU_RS01495 328fac8caf022522d02f14a080966af6 474 Gene3D G3DSA:1.10.1060.10 226 283 5.4E-7 T 21-04-2016 VFU_RS07050 d52f0375e132c2aa9eed3bfe5eeb23f6 402 SUPERFAMILY SSF103473 6 385 2.22E-40 T 21-04-2016 IPR020846 Major facilitator superfamily domain VFU_RS07050 d52f0375e132c2aa9eed3bfe5eeb23f6 402 Gene3D G3DSA:1.20.1250.20 214 384 5.2E-9 T 21-04-2016 VFU_RS07050 d52f0375e132c2aa9eed3bfe5eeb23f6 402 Gene3D G3DSA:1.20.1250.20 11 191 1.8E-20 T 21-04-2016 VFU_RS07050 d52f0375e132c2aa9eed3bfe5eeb23f6 402 Pfam PF07690 Major Facilitator Superfamily 15 350 5.2E-26 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VFU_RS08685 d49fe76273828a1a24ebfa644dfab7ac 652 Gene3D G3DSA:3.40.50.300 4 224 3.2E-69 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS08685 d49fe76273828a1a24ebfa644dfab7ac 652 PANTHER PTHR24220 7 236 1.4E-101 T 21-04-2016 VFU_RS08685 d49fe76273828a1a24ebfa644dfab7ac 652 PANTHER PTHR24220 418 574 1.4E-101 T 21-04-2016 VFU_RS08685 d49fe76273828a1a24ebfa644dfab7ac 652 SMART SM00382 34 221 6.4E-18 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS08685 d49fe76273828a1a24ebfa644dfab7ac 652 Pfam PF12704 MacB-like periplasmic core domain 277 494 8.7E-40 T 21-04-2016 IPR025857 MacB-like periplasmic core domain VFU_RS08685 d49fe76273828a1a24ebfa644dfab7ac 652 Pfam PF00005 ABC transporter 25 173 5.7E-30 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS08685 d49fe76273828a1a24ebfa644dfab7ac 652 PANTHER PTHR24220:SF578 7 236 1.4E-101 T 21-04-2016 VFU_RS08685 d49fe76273828a1a24ebfa644dfab7ac 652 PANTHER PTHR24220:SF578 418 574 1.4E-101 T 21-04-2016 VFU_RS08685 d49fe76273828a1a24ebfa644dfab7ac 652 SUPERFAMILY SSF52540 5 226 3.12E-71 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS08685 d49fe76273828a1a24ebfa644dfab7ac 652 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS08685 d49fe76273828a1a24ebfa644dfab7ac 652 Pfam PF02687 FtsX-like permease family 532 645 5.7E-20 T 21-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 VFU_RS09780 37d64a18efab1eaab3b72c5e0bb2a6d1 229 Gene3D G3DSA:3.40.50.620 1 212 2.7E-85 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VFU_RS09780 37d64a18efab1eaab3b72c5e0bb2a6d1 229 SUPERFAMILY SSF52402 1 211 1.39E-68 T 21-04-2016 VFU_RS09780 37d64a18efab1eaab3b72c5e0bb2a6d1 229 PANTHER PTHR11587:SF3 1 212 3.3E-103 T 21-04-2016 VFU_RS09780 37d64a18efab1eaab3b72c5e0bb2a6d1 229 PANTHER PTHR11587 1 212 3.3E-103 T 21-04-2016 VFU_RS09780 37d64a18efab1eaab3b72c5e0bb2a6d1 229 PIRSF PIRSF006293 1 224 7.9E-83 T 21-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 VFU_RS09780 37d64a18efab1eaab3b72c5e0bb2a6d1 229 Pfam PF06508 Queuosine biosynthesis protein QueC 3 212 7.3E-86 T 21-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 VFU_RS09780 37d64a18efab1eaab3b72c5e0bb2a6d1 229 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 205 1.1E-84 T 21-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 VFU_RS09780 37d64a18efab1eaab3b72c5e0bb2a6d1 229 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 218 50.681 T 21-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 VFU_RS14105 64f136776b547d8b3ae17ca78e41fa9c 1487 PANTHER PTHR11938 2 1477 0.0 T 21-04-2016 VFU_RS14105 64f136776b547d8b3ae17ca78e41fa9c 1487 PANTHER PTHR11938:SF1 2 1477 0.0 T 21-04-2016 VFU_RS14105 64f136776b547d8b3ae17ca78e41fa9c 1487 Gene3D G3DSA:3.20.20.70 440 779 1.4E-99 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS14105 64f136776b547d8b3ae17ca78e41fa9c 1487 Pfam PF00310 Glutamine amidotransferases class-II 13 426 5.6E-178 T 21-04-2016 IPR017932 Glutamine amidotransferase type 2 domain VFU_RS14105 64f136776b547d8b3ae17ca78e41fa9c 1487 Gene3D G3DSA:3.60.20.10 13 435 1.3E-171 T 21-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VFU_RS14105 64f136776b547d8b3ae17ca78e41fa9c 1487 Pfam PF04898 Glutamate synthase central domain 458 738 2.4E-104 T 21-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 VFU_RS14105 64f136776b547d8b3ae17ca78e41fa9c 1487 Gene3D G3DSA:3.20.20.70 815 1189 2.9E-164 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS14105 64f136776b547d8b3ae17ca78e41fa9c 1487 Pfam PF01645 Conserved region in glutamate synthase 794 1157 5.9E-153 T 21-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 VFU_RS14105 64f136776b547d8b3ae17ca78e41fa9c 1487 Pfam PF01493 GXGXG motif 1237 1419 2.4E-73 T 21-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 VFU_RS14105 64f136776b547d8b3ae17ca78e41fa9c 1487 SUPERFAMILY SSF51395 434 1191 9.77E-251 T 21-04-2016 VFU_RS14105 64f136776b547d8b3ae17ca78e41fa9c 1487 Gene3D G3DSA:2.160.20.60 1212 1465 6.4E-95 T 21-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 VFU_RS14105 64f136776b547d8b3ae17ca78e41fa9c 1487 SUPERFAMILY SSF56235 13 429 2.39E-148 T 21-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VFU_RS14105 64f136776b547d8b3ae17ca78e41fa9c 1487 SUPERFAMILY SSF69336 1213 1465 7.06E-88 T 21-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 VFU_RS07570 190102738fef675516bbb4dd9ed8bc85 323 Gene3D G3DSA:3.40.50.300 2 254 8.6E-73 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS07570 190102738fef675516bbb4dd9ed8bc85 323 PANTHER PTHR24220 5 315 3.9E-160 T 21-04-2016 VFU_RS07570 190102738fef675516bbb4dd9ed8bc85 323 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 296 5.0E-18 T 21-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VFU_RS07570 190102738fef675516bbb4dd9ed8bc85 323 Pfam PF00005 ABC transporter 24 180 1.8E-28 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS07570 190102738fef675516bbb4dd9ed8bc85 323 PANTHER PTHR24220:SF535 5 315 3.9E-160 T 21-04-2016 VFU_RS07570 190102738fef675516bbb4dd9ed8bc85 323 SMART SM00382 32 238 1.1E-13 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS07570 190102738fef675516bbb4dd9ed8bc85 323 SUPERFAMILY SSF52540 31 301 9.21E-71 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS07570 190102738fef675516bbb4dd9ed8bc85 323 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 315 4.9E-23 T 21-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VFU_RS07570 190102738fef675516bbb4dd9ed8bc85 323 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS05560 3af4f631045c6dee32aa5287cc01fc04 313 PANTHER PTHR33308:SF3 11 313 2.3E-31 T 21-04-2016 VFU_RS05560 3af4f631045c6dee32aa5287cc01fc04 313 PANTHER PTHR33308 11 313 2.3E-31 T 21-04-2016 VFU_RS05560 3af4f631045c6dee32aa5287cc01fc04 313 SMART SM00047 155 311 3.8E-45 T 21-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 VFU_RS05560 3af4f631045c6dee32aa5287cc01fc04 313 Pfam PF10135 Rod binding protein 53 102 5.3E-15 T 21-04-2016 IPR019301 Flagellar protein FlgJ, N-terminal VFU_RS05560 3af4f631045c6dee32aa5287cc01fc04 313 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 10 307 7.4E-103 T 21-04-2016 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- VFU_RS05560 3af4f631045c6dee32aa5287cc01fc04 313 PRINTS PR01002 Flagellar protein FlgJ signature 31 54 2.8E-31 T 21-04-2016 VFU_RS05560 3af4f631045c6dee32aa5287cc01fc04 313 PRINTS PR01002 Flagellar protein FlgJ signature 290 308 2.8E-31 T 21-04-2016 VFU_RS05560 3af4f631045c6dee32aa5287cc01fc04 313 PRINTS PR01002 Flagellar protein FlgJ signature 184 202 2.8E-31 T 21-04-2016 VFU_RS05560 3af4f631045c6dee32aa5287cc01fc04 313 PRINTS PR01002 Flagellar protein FlgJ signature 160 183 2.8E-31 T 21-04-2016 VFU_RS05560 3af4f631045c6dee32aa5287cc01fc04 313 PRINTS PR01002 Flagellar protein FlgJ signature 79 101 2.8E-31 T 21-04-2016 VFU_RS05560 3af4f631045c6dee32aa5287cc01fc04 313 PRINTS PR01002 Flagellar protein FlgJ signature 225 246 2.8E-31 T 21-04-2016 VFU_RS05560 3af4f631045c6dee32aa5287cc01fc04 313 PRINTS PR01002 Flagellar protein FlgJ signature 247 268 2.8E-31 T 21-04-2016 VFU_RS05560 3af4f631045c6dee32aa5287cc01fc04 313 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 171 307 1.1E-19 T 21-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 VFU_RS08270 d553e985fdcd0abe3b7bca5891e88b55 314 PANTHER PTHR32347:SF12 11 313 5.4E-60 T 21-04-2016 VFU_RS08270 d553e985fdcd0abe3b7bca5891e88b55 314 SUPERFAMILY SSF111369 100 157 5.1E-6 T 21-04-2016 VFU_RS08270 d553e985fdcd0abe3b7bca5891e88b55 314 SUPERFAMILY SSF111369 33 89 2.22E-6 T 21-04-2016 VFU_RS08270 d553e985fdcd0abe3b7bca5891e88b55 314 Pfam PF13437 HlyD family secretion protein 195 275 4.1E-6 T 21-04-2016 VFU_RS08270 d553e985fdcd0abe3b7bca5891e88b55 314 Pfam PF13533 Biotin-lipoyl like 44 79 6.4E-7 T 21-04-2016 VFU_RS08270 d553e985fdcd0abe3b7bca5891e88b55 314 Gene3D G3DSA:2.40.50.100 23 83 6.2E-4 T 21-04-2016 VFU_RS08270 d553e985fdcd0abe3b7bca5891e88b55 314 PANTHER PTHR32347 11 313 5.4E-60 T 21-04-2016 VFU_RS08270 d553e985fdcd0abe3b7bca5891e88b55 314 SUPERFAMILY SSF111369 146 248 4.32E-6 T 21-04-2016 VFU_RS08270 d553e985fdcd0abe3b7bca5891e88b55 314 Gene3D G3DSA:2.40.50.100 188 224 4.1E-7 T 21-04-2016 VFU_RS13685 355636288b083a26ae2f42e3f640601f 84 Gene3D G3DSA:3.30.70.20 5 72 1.2E-16 T 21-04-2016 VFU_RS13685 355636288b083a26ae2f42e3f640601f 84 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VFU_RS13685 355636288b083a26ae2f42e3f640601f 84 Pfam PF00037 4Fe-4S binding domain 6 25 2.9E-6 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VFU_RS13685 355636288b083a26ae2f42e3f640601f 84 PANTHER PTHR24960 1 81 1.7E-28 T 21-04-2016 VFU_RS13685 355636288b083a26ae2f42e3f640601f 84 PANTHER PTHR24960:SF38 1 81 1.7E-28 T 21-04-2016 VFU_RS13685 355636288b083a26ae2f42e3f640601f 84 SUPERFAMILY SSF54862 5 72 4.89E-17 T 21-04-2016 VFU_RS12440 4840d6fe11531692c2375f736c413c72 213 Hamap MF_00551 Uridine kinase [udk]. 4 212 39.787 T 21-04-2016 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 VFU_RS12440 4840d6fe11531692c2375f736c413c72 213 Gene3D G3DSA:3.40.50.300 3 204 4.8E-69 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS12440 4840d6fe11531692c2375f736c413c72 213 PANTHER PTHR10285 1 211 2.0E-97 T 21-04-2016 VFU_RS12440 4840d6fe11531692c2375f736c413c72 213 SUPERFAMILY SSF52540 6 204 2.21E-49 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS12440 4840d6fe11531692c2375f736c413c72 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 9 198 1.3E-42 T 21-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 VFU_RS12440 4840d6fe11531692c2375f736c413c72 213 PRINTS PR00988 Uridine kinase signature 7 24 4.1E-37 T 21-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 VFU_RS12440 4840d6fe11531692c2375f736c413c72 213 PRINTS PR00988 Uridine kinase signature 86 101 4.1E-37 T 21-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 VFU_RS12440 4840d6fe11531692c2375f736c413c72 213 PRINTS PR00988 Uridine kinase signature 178 191 4.1E-37 T 21-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 VFU_RS12440 4840d6fe11531692c2375f736c413c72 213 PRINTS PR00988 Uridine kinase signature 156 167 4.1E-37 T 21-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 VFU_RS12440 4840d6fe11531692c2375f736c413c72 213 PRINTS PR00988 Uridine kinase signature 41 52 4.1E-37 T 21-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 VFU_RS12440 4840d6fe11531692c2375f736c413c72 213 PRINTS PR00988 Uridine kinase signature 142 152 4.1E-37 T 21-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 VFU_RS12440 4840d6fe11531692c2375f736c413c72 213 TIGRFAM TIGR00235 udk: uridine kinase 3 211 4.4E-91 T 21-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 VFU_RS12080 9f2a44ac28c7a52f0a9331dd33d70fe9 276 SUPERFAMILY SSF53335 4 253 1.64E-42 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS12080 9f2a44ac28c7a52f0a9331dd33d70fe9 276 PANTHER PTHR10108 17 267 4.2E-43 T 21-04-2016 VFU_RS12080 9f2a44ac28c7a52f0a9331dd33d70fe9 276 PIRSF PIRSF018249 1 272 1.4E-86 T 21-04-2016 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 VFU_RS12080 9f2a44ac28c7a52f0a9331dd33d70fe9 276 PANTHER PTHR10108:SF886 17 267 4.2E-43 T 21-04-2016 VFU_RS12080 9f2a44ac28c7a52f0a9331dd33d70fe9 276 Gene3D G3DSA:3.40.50.150 64 209 5.4E-20 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS12080 9f2a44ac28c7a52f0a9331dd33d70fe9 276 Pfam PF13847 Methyltransferase domain 86 221 1.5E-13 T 21-04-2016 IPR025714 Methyltransferase domain VFU_RS06050 823b77c4452b6f1bfe306bfedd4540b9 337 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 6 334 2.5E-130 T 21-04-2016 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VFU_RS06050 823b77c4452b6f1bfe306bfedd4540b9 337 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 232 246 - T 21-04-2016 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VFU_RS06050 823b77c4452b6f1bfe306bfedd4540b9 337 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 333 36.628 T 21-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VFU_RS06050 823b77c4452b6f1bfe306bfedd4540b9 337 PIRSF PIRSF000148 4 337 6.6E-134 T 21-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VFU_RS06050 823b77c4452b6f1bfe306bfedd4540b9 337 PANTHER PTHR10174:SF2 48 336 2.1E-89 T 21-04-2016 VFU_RS06050 823b77c4452b6f1bfe306bfedd4540b9 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 120 9.6E-33 T 21-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VFU_RS06050 823b77c4452b6f1bfe306bfedd4540b9 337 SMART SM00859 6 121 7.4E-43 T 21-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VFU_RS06050 823b77c4452b6f1bfe306bfedd4540b9 337 Gene3D G3DSA:3.30.360.10 144 315 7.9E-81 T 21-04-2016 VFU_RS06050 823b77c4452b6f1bfe306bfedd4540b9 337 SUPERFAMILY SSF51735 5 159 3.23E-52 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS06050 823b77c4452b6f1bfe306bfedd4540b9 337 Gene3D G3DSA:3.40.50.720 1 143 3.5E-65 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS06050 823b77c4452b6f1bfe306bfedd4540b9 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 319 2.5E-62 T 21-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VFU_RS06050 823b77c4452b6f1bfe306bfedd4540b9 337 PANTHER PTHR10174 48 336 2.1E-89 T 21-04-2016 VFU_RS06050 823b77c4452b6f1bfe306bfedd4540b9 337 SUPERFAMILY SSF55347 131 320 8.04E-79 T 21-04-2016 VFU_RS13765 2a6125708aa04d5127d231d10eee8427 1214 Gene3D G3DSA:3.40.50.300 125 154 4.7E-50 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS13765 2a6125708aa04d5127d231d10eee8427 1214 Gene3D G3DSA:3.40.50.300 6 87 4.7E-50 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS13765 2a6125708aa04d5127d231d10eee8427 1214 Gene3D G3DSA:3.40.50.300 353 452 4.7E-50 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS13765 2a6125708aa04d5127d231d10eee8427 1214 Pfam PF13361 UvrD-like helicase C-terminal domain 555 826 5.3E-16 T 21-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VFU_RS13765 2a6125708aa04d5127d231d10eee8427 1214 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 13 1195 0.0 T 21-04-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 VFU_RS13765 2a6125708aa04d5127d231d10eee8427 1214 Gene3D G3DSA:1.10.486.10 597 745 5.1E-52 T 21-04-2016 VFU_RS13765 2a6125708aa04d5127d231d10eee8427 1214 Pfam PF00580 UvrD/REP helicase N-terminal domain 19 439 3.8E-58 T 21-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 VFU_RS13765 2a6125708aa04d5127d231d10eee8427 1214 Pfam PF12705 PD-(D/E)XK nuclease superfamily 971 1195 3.2E-8 T 21-04-2016 VFU_RS13765 2a6125708aa04d5127d231d10eee8427 1214 PANTHER PTHR11070:SF23 123 220 0.0 T 21-04-2016 VFU_RS13765 2a6125708aa04d5127d231d10eee8427 1214 PANTHER PTHR11070:SF23 518 791 0.0 T 21-04-2016 VFU_RS13765 2a6125708aa04d5127d231d10eee8427 1214 PANTHER PTHR11070:SF23 811 1191 0.0 T 21-04-2016 VFU_RS13765 2a6125708aa04d5127d231d10eee8427 1214 PANTHER PTHR11070:SF23 1 94 0.0 T 21-04-2016 VFU_RS13765 2a6125708aa04d5127d231d10eee8427 1214 PANTHER PTHR11070:SF23 303 491 0.0 T 21-04-2016 VFU_RS13765 2a6125708aa04d5127d231d10eee8427 1214 Gene3D G3DSA:3.40.50.300 453 594 2.2E-58 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS13765 2a6125708aa04d5127d231d10eee8427 1214 Gene3D G3DSA:3.40.50.300 746 875 2.2E-58 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS13765 2a6125708aa04d5127d231d10eee8427 1214 SUPERFAMILY SSF52980 918 1196 1.61E-86 T 21-04-2016 IPR011335 Restriction endonuclease type II-like VFU_RS13765 2a6125708aa04d5127d231d10eee8427 1214 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 9 1196 15.105 T 21-04-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 VFU_RS13765 2a6125708aa04d5127d231d10eee8427 1214 Gene3D G3DSA:3.90.320.10 907 1198 8.4E-103 T 21-04-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 VFU_RS13765 2a6125708aa04d5127d231d10eee8427 1214 Gene3D G3DSA:1.10.3170.10 160 351 2.1E-57 T 21-04-2016 VFU_RS13765 2a6125708aa04d5127d231d10eee8427 1214 SUPERFAMILY SSF52540 123 207 4.38E-107 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS13765 2a6125708aa04d5127d231d10eee8427 1214 SUPERFAMILY SSF52540 18 85 4.38E-107 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS13765 2a6125708aa04d5127d231d10eee8427 1214 SUPERFAMILY SSF52540 328 858 4.38E-107 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS13765 2a6125708aa04d5127d231d10eee8427 1214 PANTHER PTHR11070 123 220 0.0 T 21-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 VFU_RS13765 2a6125708aa04d5127d231d10eee8427 1214 PANTHER PTHR11070 518 791 0.0 T 21-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 VFU_RS13765 2a6125708aa04d5127d231d10eee8427 1214 PANTHER PTHR11070 811 1191 0.0 T 21-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 VFU_RS13765 2a6125708aa04d5127d231d10eee8427 1214 PANTHER PTHR11070 1 94 0.0 T 21-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 VFU_RS13765 2a6125708aa04d5127d231d10eee8427 1214 PANTHER PTHR11070 303 491 0.0 T 21-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 VFU_RS01640 b4cc36d553e1bba47f1d8bff9ead49bf 245 Pfam PF00005 ABC transporter 17 168 2.6E-31 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS01640 b4cc36d553e1bba47f1d8bff9ead49bf 245 PANTHER PTHR24220:SF327 3 242 5.3E-127 T 21-04-2016 VFU_RS01640 b4cc36d553e1bba47f1d8bff9ead49bf 245 Gene3D G3DSA:3.40.50.300 1 240 9.9E-80 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS01640 b4cc36d553e1bba47f1d8bff9ead49bf 245 PIRSF PIRSF039085 1 244 4.2E-104 T 21-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VFU_RS01640 b4cc36d553e1bba47f1d8bff9ead49bf 245 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS01640 b4cc36d553e1bba47f1d8bff9ead49bf 245 PANTHER PTHR24220 3 242 5.3E-127 T 21-04-2016 VFU_RS01640 b4cc36d553e1bba47f1d8bff9ead49bf 245 SUPERFAMILY SSF52540 1 238 3.99E-75 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS01640 b4cc36d553e1bba47f1d8bff9ead49bf 245 SMART SM00382 26 216 7.4E-13 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS08190 e817ea1b9c4b08b687f01b0dad3f4dcf 401 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 199 213 - T 21-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VFU_RS08190 e817ea1b9c4b08b687f01b0dad3f4dcf 401 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 7 389 1.1E-175 T 21-04-2016 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936|UniPathway: UPA00051 VFU_RS08190 e817ea1b9c4b08b687f01b0dad3f4dcf 401 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 387 1.4E-117 T 21-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VFU_RS08190 e817ea1b9c4b08b687f01b0dad3f4dcf 401 SUPERFAMILY SSF53383 18 388 1.33E-100 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VFU_RS08190 e817ea1b9c4b08b687f01b0dad3f4dcf 401 Gene3D G3DSA:3.90.1150.10 256 389 6.3E-37 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VFU_RS08190 e817ea1b9c4b08b687f01b0dad3f4dcf 401 PANTHER PTHR11808:SF45 1 392 3.0E-266 T 21-04-2016 VFU_RS08190 e817ea1b9c4b08b687f01b0dad3f4dcf 401 PIRSF PIRSF001434 1 391 3.2E-125 T 21-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VFU_RS08190 e817ea1b9c4b08b687f01b0dad3f4dcf 401 Gene3D G3DSA:3.40.640.10 6 255 1.2E-81 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VFU_RS08190 e817ea1b9c4b08b687f01b0dad3f4dcf 401 PANTHER PTHR11808 1 392 3.0E-266 T 21-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VFU_RS03310 da2b81ad9d1f16d7c336313723cae662 110 Pfam PF00237 Ribosomal protein L22p/L17e 9 107 3.8E-35 T 21-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 VFU_RS03310 da2b81ad9d1f16d7c336313723cae662 110 SUPERFAMILY SSF54843 1 109 1.44E-44 T 21-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 VFU_RS03310 da2b81ad9d1f16d7c336313723cae662 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 21-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS03310 da2b81ad9d1f16d7c336313723cae662 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 29.662 T 21-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 VFU_RS03310 da2b81ad9d1f16d7c336313723cae662 110 Gene3D G3DSA:3.90.470.10 1 109 3.3E-45 T 21-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 VFU_RS03310 da2b81ad9d1f16d7c336313723cae662 110 PANTHER PTHR13501 1 109 3.3E-54 T 21-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 VFU_RS03310 da2b81ad9d1f16d7c336313723cae662 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 8.1E-50 T 21-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 VFU_RS09465 c81edef555ac7ae91f092da34669e1a4 667 Pfam PF08180 B melanoma antigen family 9 37 1.0E-10 T 21-04-2016 IPR012530 B melanoma antigen VFU_RS09465 c81edef555ac7ae91f092da34669e1a4 667 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 240 321 4.0E-13 T 21-04-2016 IPR001478 PDZ domain GO:0005515 VFU_RS09465 c81edef555ac7ae91f092da34669e1a4 667 SUPERFAMILY SSF50156 218 338 1.56E-14 T 21-04-2016 IPR001478 PDZ domain GO:0005515 VFU_RS09465 c81edef555ac7ae91f092da34669e1a4 667 PANTHER PTHR32060 7 601 0.0 T 21-04-2016 VFU_RS09465 c81edef555ac7ae91f092da34669e1a4 667 SMART SM00228 247 324 1.4E-7 T 21-04-2016 IPR001478 PDZ domain GO:0005515 VFU_RS09465 c81edef555ac7ae91f092da34669e1a4 667 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 531 664 6.6E-41 T 21-04-2016 IPR020992 Tail specific protease, C-terminal VFU_RS09465 c81edef555ac7ae91f092da34669e1a4 667 SMART SM00245 327 528 2.0E-67 T 21-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 VFU_RS09465 c81edef555ac7ae91f092da34669e1a4 667 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 196 548 7.7E-114 T 21-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 VFU_RS09465 c81edef555ac7ae91f092da34669e1a4 667 Gene3D G3DSA:3.90.226.10 337 530 1.1E-64 T 21-04-2016 IPR029045 ClpP/crotonase-like domain VFU_RS09465 c81edef555ac7ae91f092da34669e1a4 667 Gene3D G3DSA:3.90.226.10 642 666 1.1E-64 T 21-04-2016 IPR029045 ClpP/crotonase-like domain VFU_RS09465 c81edef555ac7ae91f092da34669e1a4 667 Gene3D G3DSA:2.30.42.10 253 336 5.8E-20 T 21-04-2016 IPR001478 PDZ domain GO:0005515 VFU_RS09465 c81edef555ac7ae91f092da34669e1a4 667 Gene3D G3DSA:3.30.750.44 163 252 2.3E-5 T 21-04-2016 VFU_RS09465 c81edef555ac7ae91f092da34669e1a4 667 PANTHER PTHR32060:SF11 7 601 0.0 T 21-04-2016 VFU_RS09465 c81edef555ac7ae91f092da34669e1a4 667 Pfam PF03572 Peptidase family S41 357 526 8.0E-52 T 21-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 VFU_RS09465 c81edef555ac7ae91f092da34669e1a4 667 SUPERFAMILY SSF52096 351 532 5.47E-72 T 21-04-2016 IPR029045 ClpP/crotonase-like domain VFU_RS09465 c81edef555ac7ae91f092da34669e1a4 667 SUPERFAMILY SSF52096 167 265 5.47E-72 T 21-04-2016 IPR029045 ClpP/crotonase-like domain VFU_RS15215 e7f289fa1a2cad0246ba222409adc766 177 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 177 9.9E-62 T 21-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 VFU_RS15215 e7f289fa1a2cad0246ba222409adc766 177 Hamap MF_00984 Single-stranded DNA-binding protein. 6 118 39.198 T 21-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 VFU_RS15215 e7f289fa1a2cad0246ba222409adc766 177 SUPERFAMILY SSF50249 4 177 4.11E-61 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS15215 e7f289fa1a2cad0246ba222409adc766 177 Gene3D G3DSA:2.40.50.140 4 177 2.0E-55 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS15215 e7f289fa1a2cad0246ba222409adc766 177 PANTHER PTHR10302 4 177 1.4E-53 T 21-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 VFU_RS15215 e7f289fa1a2cad0246ba222409adc766 177 Pfam PF00436 Single-strand binding protein family 6 113 7.0E-43 T 21-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 VFU_RS15215 e7f289fa1a2cad0246ba222409adc766 177 PIRSF PIRSF002070 2 172 6.1E-35 T 21-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 VFU_RS22845 840ec76e51ae2e48205ad491fda14676 107 Pfam PF02885 Glycosyl transferase family, helical bundle domain 11 61 3.8E-12 T 21-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain VFU_RS22845 840ec76e51ae2e48205ad491fda14676 107 SUPERFAMILY SSF47648 3 64 1.7E-15 T 21-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain VFU_RS22845 840ec76e51ae2e48205ad491fda14676 107 Gene3D G3DSA:1.20.970.10 6 63 1.6E-13 T 21-04-2016 VFU_RS22845 840ec76e51ae2e48205ad491fda14676 107 SUPERFAMILY SSF52418 68 106 2.17E-5 T 21-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 VFU_RS03035 128e70f30c4a28c64b827aab29f77f23 155 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 11 149 1.6E-58 T 21-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VFU_RS03035 128e70f30c4a28c64b827aab29f77f23 155 PANTHER PTHR36918:SF1 1 152 8.2E-83 T 21-04-2016 VFU_RS03035 128e70f30c4a28c64b827aab29f77f23 155 Pfam PF02556 Preprotein translocase subunit SecB 8 147 1.2E-55 T 21-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VFU_RS03035 128e70f30c4a28c64b827aab29f77f23 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 16 33 4.9E-39 T 21-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VFU_RS03035 128e70f30c4a28c64b827aab29f77f23 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 126 144 4.9E-39 T 21-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VFU_RS03035 128e70f30c4a28c64b827aab29f77f23 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 76 96 4.9E-39 T 21-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VFU_RS03035 128e70f30c4a28c64b827aab29f77f23 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 100 122 4.9E-39 T 21-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VFU_RS03035 128e70f30c4a28c64b827aab29f77f23 155 Hamap MF_00821 Protein-export protein SecB [secB]. 1 148 32.359 T 21-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VFU_RS03035 128e70f30c4a28c64b827aab29f77f23 155 Gene3D G3DSA:3.10.420.10 6 153 6.2E-61 T 21-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VFU_RS03035 128e70f30c4a28c64b827aab29f77f23 155 PANTHER PTHR36918 1 152 8.2E-83 T 21-04-2016 VFU_RS03035 128e70f30c4a28c64b827aab29f77f23 155 SUPERFAMILY SSF54611 4 144 3.49E-52 T 21-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VFU_RS14300 591c90f39c6359cf93913c94cd9c9cb9 162 Pfam PF04386 Stringent starvation protein B 9 162 3.7E-42 T 21-04-2016 IPR007481 Stringent starvation protein B VFU_RS14300 591c90f39c6359cf93913c94cd9c9cb9 162 Gene3D G3DSA:2.30.30.220 4 110 1.2E-50 T 21-04-2016 IPR007481 Stringent starvation protein B VFU_RS14300 591c90f39c6359cf93913c94cd9c9cb9 162 PANTHER PTHR37486:SF1 2 162 3.6E-82 T 21-04-2016 VFU_RS14300 591c90f39c6359cf93913c94cd9c9cb9 162 SUPERFAMILY SSF101738 5 120 2.62E-48 T 21-04-2016 IPR007481 Stringent starvation protein B VFU_RS14300 591c90f39c6359cf93913c94cd9c9cb9 162 PIRSF PIRSF005276 3 162 1.3E-60 T 21-04-2016 IPR007481 Stringent starvation protein B VFU_RS14300 591c90f39c6359cf93913c94cd9c9cb9 162 PANTHER PTHR37486 2 162 3.6E-82 T 21-04-2016 VFU_RS06590 9141bcbeafa018e781d70c99a8eafbef 481 Gene3D G3DSA:3.40.1380.20 332 480 6.5E-41 T 21-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS06590 9141bcbeafa018e781d70c99a8eafbef 481 Gene3D G3DSA:3.20.20.60 6 76 1.7E-94 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VFU_RS06590 9141bcbeafa018e781d70c99a8eafbef 481 Gene3D G3DSA:3.20.20.60 172 331 1.7E-94 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VFU_RS06590 9141bcbeafa018e781d70c99a8eafbef 481 SUPERFAMILY SSF52935 329 480 6.67E-38 T 21-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS06590 9141bcbeafa018e781d70c99a8eafbef 481 Pfam PF00224 Pyruvate kinase, barrel domain 6 349 1.7E-129 T 21-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS06590 9141bcbeafa018e781d70c99a8eafbef 481 SUPERFAMILY SSF50800 74 169 4.36E-25 T 21-04-2016 IPR011037 Pyruvate kinase-like, insert domain VFU_RS06590 9141bcbeafa018e781d70c99a8eafbef 481 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 478 2.9E-29 T 21-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS06590 9141bcbeafa018e781d70c99a8eafbef 481 Gene3D G3DSA:2.40.33.10 77 170 5.8E-28 T 21-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS06590 9141bcbeafa018e781d70c99a8eafbef 481 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 479 3.0E-168 T 21-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS06590 9141bcbeafa018e781d70c99a8eafbef 481 PANTHER PTHR11817 5 480 2.5E-303 T 21-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS06590 9141bcbeafa018e781d70c99a8eafbef 481 SUPERFAMILY SSF51621 171 346 6.28E-87 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VFU_RS06590 9141bcbeafa018e781d70c99a8eafbef 481 SUPERFAMILY SSF51621 4 79 6.28E-87 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VFU_RS06590 9141bcbeafa018e781d70c99a8eafbef 481 PANTHER PTHR11817:SF17 5 480 2.5E-303 T 21-04-2016 VFU_RS06590 9141bcbeafa018e781d70c99a8eafbef 481 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 21-04-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS06590 9141bcbeafa018e781d70c99a8eafbef 481 PRINTS PR01050 Pyruvate kinase family signature 190 204 2.581515E-55 T 21-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS06590 9141bcbeafa018e781d70c99a8eafbef 481 PRINTS PR01050 Pyruvate kinase family signature 223 249 2.581515E-55 T 21-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS06590 9141bcbeafa018e781d70c99a8eafbef 481 PRINTS PR01050 Pyruvate kinase family signature 63 79 2.581515E-55 T 21-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS06590 9141bcbeafa018e781d70c99a8eafbef 481 PRINTS PR01050 Pyruvate kinase family signature 300 318 2.581515E-55 T 21-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS06590 9141bcbeafa018e781d70c99a8eafbef 481 PRINTS PR01050 Pyruvate kinase family signature 275 299 2.581515E-55 T 21-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS06590 9141bcbeafa018e781d70c99a8eafbef 481 PRINTS PR01050 Pyruvate kinase family signature 319 335 2.581515E-55 T 21-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS06590 9141bcbeafa018e781d70c99a8eafbef 481 PRINTS PR01050 Pyruvate kinase family signature 250 274 2.581515E-55 T 21-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS03700 ffcbbfd6e3c33885b2ef5fc157d6e36c 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 1.3E-26 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VFU_RS03700 ffcbbfd6e3c33885b2ef5fc157d6e36c 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 1.3E-26 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VFU_RS03700 ffcbbfd6e3c33885b2ef5fc157d6e36c 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 1.3E-26 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VFU_RS03700 ffcbbfd6e3c33885b2ef5fc157d6e36c 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 1.3E-26 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VFU_RS03700 ffcbbfd6e3c33885b2ef5fc157d6e36c 309 Gene3D G3DSA:3.40.50.1370 7 144 7.6E-50 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VFU_RS03700 ffcbbfd6e3c33885b2ef5fc157d6e36c 309 PANTHER PTHR11405 1 305 1.1E-143 T 21-04-2016 VFU_RS03700 ffcbbfd6e3c33885b2ef5fc157d6e36c 309 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 1.9E-42 T 21-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 VFU_RS03700 ffcbbfd6e3c33885b2ef5fc157d6e36c 309 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 38.403 T 21-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VFU_RS03700 ffcbbfd6e3c33885b2ef5fc157d6e36c 309 PANTHER PTHR11405:SF16 1 305 1.1E-143 T 21-04-2016 VFU_RS03700 ffcbbfd6e3c33885b2ef5fc157d6e36c 309 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VFU_RS03700 ffcbbfd6e3c33885b2ef5fc157d6e36c 309 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 4.1E-34 T 21-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 VFU_RS03700 ffcbbfd6e3c33885b2ef5fc157d6e36c 309 Gene3D G3DSA:3.40.50.1370 145 292 1.3E-55 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VFU_RS03700 ffcbbfd6e3c33885b2ef5fc157d6e36c 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 1.1E-35 T 21-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VFU_RS03700 ffcbbfd6e3c33885b2ef5fc157d6e36c 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 1.1E-35 T 21-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VFU_RS03700 ffcbbfd6e3c33885b2ef5fc157d6e36c 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 1.1E-35 T 21-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VFU_RS03700 ffcbbfd6e3c33885b2ef5fc157d6e36c 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 1.1E-35 T 21-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VFU_RS03700 ffcbbfd6e3c33885b2ef5fc157d6e36c 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 1.1E-35 T 21-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VFU_RS03700 ffcbbfd6e3c33885b2ef5fc157d6e36c 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 1.1E-35 T 21-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VFU_RS03700 ffcbbfd6e3c33885b2ef5fc157d6e36c 309 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 4.3E-116 T 21-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VFU_RS03700 ffcbbfd6e3c33885b2ef5fc157d6e36c 309 SUPERFAMILY SSF53671 4 306 1.2E-102 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VFU_RS14795 63f25ef5e32160e1a2cebd8ee8f548da 664 SUPERFAMILY SSF52518 5 319 1.36E-120 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold VFU_RS14795 63f25ef5e32160e1a2cebd8ee8f548da 664 SUPERFAMILY SSF52922 533 664 1.57E-44 T 21-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 VFU_RS14795 63f25ef5e32160e1a2cebd8ee8f548da 664 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 663 0.0 T 21-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 VFU_RS14795 63f25ef5e32160e1a2cebd8ee8f548da 664 PANTHER PTHR11624 336 664 0.0 T 21-04-2016 IPR033247 Transketolase family VFU_RS14795 63f25ef5e32160e1a2cebd8ee8f548da 664 PANTHER PTHR11624 1 309 0.0 T 21-04-2016 IPR033247 Transketolase family VFU_RS14795 63f25ef5e32160e1a2cebd8ee8f548da 664 Gene3D G3DSA:3.40.50.970 4 318 3.4E-133 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold VFU_RS14795 63f25ef5e32160e1a2cebd8ee8f548da 664 SMART SM00861 354 525 1.1E-67 T 21-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain VFU_RS14795 63f25ef5e32160e1a2cebd8ee8f548da 664 Gene3D G3DSA:3.40.50.920 538 663 1.1E-51 T 21-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 VFU_RS14795 63f25ef5e32160e1a2cebd8ee8f548da 664 PANTHER PTHR11624:SF1 336 664 0.0 T 21-04-2016 VFU_RS14795 63f25ef5e32160e1a2cebd8ee8f548da 664 PANTHER PTHR11624:SF1 1 309 0.0 T 21-04-2016 VFU_RS14795 63f25ef5e32160e1a2cebd8ee8f548da 664 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 21-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 VFU_RS14795 63f25ef5e32160e1a2cebd8ee8f548da 664 Pfam PF02780 Transketolase, C-terminal domain 541 655 9.4E-20 T 21-04-2016 IPR033248 Transketolase, C-terminal domain VFU_RS14795 63f25ef5e32160e1a2cebd8ee8f548da 664 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 21-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 VFU_RS14795 63f25ef5e32160e1a2cebd8ee8f548da 664 Gene3D G3DSA:3.40.50.970 326 533 3.4E-81 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold VFU_RS14795 63f25ef5e32160e1a2cebd8ee8f548da 664 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 333 2.9E-167 T 21-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 VFU_RS14795 63f25ef5e32160e1a2cebd8ee8f548da 664 SUPERFAMILY SSF52518 335 526 6.78E-68 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold VFU_RS14795 63f25ef5e32160e1a2cebd8ee8f548da 664 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 1.1E-47 T 21-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain VFU_RS07930 04a8781946fbb974db8a529b05605cd7 555 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 382 545 1.6E-27 T 21-04-2016 IPR000160 GGDEF domain VFU_RS07930 04a8781946fbb974db8a529b05605cd7 555 Pfam PF00990 Diguanylate cyclase, GGDEF domain 387 542 3.2E-30 T 21-04-2016 IPR000160 GGDEF domain VFU_RS07930 04a8781946fbb974db8a529b05605cd7 555 SMART SM00267 375 547 2.4E-29 T 21-04-2016 IPR000160 GGDEF domain VFU_RS07930 04a8781946fbb974db8a529b05605cd7 555 SUPERFAMILY SSF55073 391 548 5.65E-29 T 21-04-2016 IPR029787 Nucleotide cyclase VFU_RS07930 04a8781946fbb974db8a529b05605cd7 555 Gene3D G3DSA:3.30.70.270 388 550 7.0E-35 T 21-04-2016 VFU_RS11305 bb55b7dc627f67e05bd39db37ba29c43 146 PANTHER PTHR33799:SF1 2 125 3.9E-36 T 21-04-2016 VFU_RS11305 bb55b7dc627f67e05bd39db37ba29c43 146 SUPERFAMILY SSF53062 1 126 9.03E-33 T 21-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 VFU_RS11305 bb55b7dc627f67e05bd39db37ba29c43 146 Gene3D G3DSA:3.40.50.510 1 131 2.3E-37 T 21-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 VFU_RS11305 bb55b7dc627f67e05bd39db37ba29c43 146 PANTHER PTHR33799 2 125 3.9E-36 T 21-04-2016 VFU_RS11305 bb55b7dc627f67e05bd39db37ba29c43 146 Pfam PF03610 PTS system fructose IIA component 4 114 2.0E-31 T 21-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 VFU_RS02815 2db0242e62450257b1cab24feb30b1c4 483 Gene3D G3DSA:1.10.40.30 421 472 5.2E-20 T 21-04-2016 VFU_RS02815 2db0242e62450257b1cab24feb30b1c4 483 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 16 482 5.5E-253 T 21-04-2016 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 VFU_RS02815 2db0242e62450257b1cab24feb30b1c4 483 Pfam PF10415 Fumarase C C-terminus 421 474 4.6E-18 T 21-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 VFU_RS02815 2db0242e62450257b1cab24feb30b1c4 483 ProSitePatterns PS00163 Fumarate lyases signature. 330 339 - T 21-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 VFU_RS02815 2db0242e62450257b1cab24feb30b1c4 483 PRINTS PR00149 Fumarate lyase superfamily signature 193 211 1.7E-25 T 21-04-2016 IPR000362 Fumarate lyase family VFU_RS02815 2db0242e62450257b1cab24feb30b1c4 483 PRINTS PR00149 Fumarate lyase superfamily signature 330 346 1.7E-25 T 21-04-2016 IPR000362 Fumarate lyase family VFU_RS02815 2db0242e62450257b1cab24feb30b1c4 483 PRINTS PR00149 Fumarate lyase superfamily signature 284 311 1.7E-25 T 21-04-2016 IPR000362 Fumarate lyase family VFU_RS02815 2db0242e62450257b1cab24feb30b1c4 483 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 1.7E-25 T 21-04-2016 IPR000362 Fumarate lyase family VFU_RS02815 2db0242e62450257b1cab24feb30b1c4 483 Gene3D G3DSA:1.10.275.10 14 152 7.8E-56 T 21-04-2016 IPR024083 Fumarase/histidase, N-terminal VFU_RS02815 2db0242e62450257b1cab24feb30b1c4 483 SUPERFAMILY SSF48557 13 468 5.15E-143 T 21-04-2016 IPR008948 L-Aspartase-like GO:0003824 VFU_RS02815 2db0242e62450257b1cab24feb30b1c4 483 PANTHER PTHR11444 3 482 3.3E-293 T 21-04-2016 IPR000362 Fumarate lyase family VFU_RS02815 2db0242e62450257b1cab24feb30b1c4 483 Pfam PF00206 Lyase 23 355 1.9E-106 T 21-04-2016 IPR022761 Fumarate lyase, N-terminal VFU_RS02815 2db0242e62450257b1cab24feb30b1c4 483 PANTHER PTHR11444:SF25 3 482 3.3E-293 T 21-04-2016 VFU_RS02815 2db0242e62450257b1cab24feb30b1c4 483 Gene3D G3DSA:1.20.200.10 153 413 2.6E-85 T 21-04-2016 VFU_RS09480 cd90795631ef449262dcb1d0790b8fcb 598 PANTHER PTHR24221:SF233 6 60 0.0 T 21-04-2016 VFU_RS09480 cd90795631ef449262dcb1d0790b8fcb 598 PANTHER PTHR24221:SF233 78 594 0.0 T 21-04-2016 VFU_RS09480 cd90795631ef449262dcb1d0790b8fcb 598 ProSitePatterns PS00211 ABC transporters family signature. 496 510 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS09480 cd90795631ef449262dcb1d0790b8fcb 598 SUPERFAMILY SSF90123 12 345 6.28E-57 T 21-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VFU_RS09480 cd90795631ef449262dcb1d0790b8fcb 598 Pfam PF00664 ABC transporter transmembrane region 30 312 4.8E-31 T 21-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VFU_RS09480 cd90795631ef449262dcb1d0790b8fcb 598 Pfam PF00005 ABC transporter 376 524 1.7E-32 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS09480 cd90795631ef449262dcb1d0790b8fcb 598 SUPERFAMILY SSF52540 356 592 2.22E-81 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS09480 cd90795631ef449262dcb1d0790b8fcb 598 SMART SM00382 385 572 3.2E-12 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS09480 cd90795631ef449262dcb1d0790b8fcb 598 Gene3D G3DSA:3.40.50.300 361 593 3.0E-73 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS09480 cd90795631ef449262dcb1d0790b8fcb 598 PANTHER PTHR24221 6 60 0.0 T 21-04-2016 VFU_RS09480 cd90795631ef449262dcb1d0790b8fcb 598 PANTHER PTHR24221 78 594 0.0 T 21-04-2016 VFU_RS09480 cd90795631ef449262dcb1d0790b8fcb 598 Gene3D G3DSA:1.20.1560.10 12 345 5.7E-55 T 21-04-2016 VFU_RS13920 f6936d666b05513faaa4b02c0065c2fb 209 SUPERFAMILY SSF46689 106 153 4.93E-8 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS13920 f6936d666b05513faaa4b02c0065c2fb 209 PANTHER PTHR11019:SF65 98 205 8.3E-25 T 21-04-2016 VFU_RS13920 f6936d666b05513faaa4b02c0065c2fb 209 Gene3D G3DSA:1.10.10.60 157 205 1.6E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS13920 f6936d666b05513faaa4b02c0065c2fb 209 SMART SM00342 120 204 9.1E-29 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VFU_RS13920 f6936d666b05513faaa4b02c0065c2fb 209 Gene3D G3DSA:1.10.10.60 99 156 3.6E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS13920 f6936d666b05513faaa4b02c0065c2fb 209 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 173 188 3.6E-6 T 21-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VFU_RS13920 f6936d666b05513faaa4b02c0065c2fb 209 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 188 204 3.6E-6 T 21-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VFU_RS13920 f6936d666b05513faaa4b02c0065c2fb 209 PANTHER PTHR11019 98 205 8.3E-25 T 21-04-2016 VFU_RS13920 f6936d666b05513faaa4b02c0065c2fb 209 SUPERFAMILY SSF46689 157 205 4.3E-12 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS13920 f6936d666b05513faaa4b02c0065c2fb 209 Pfam PF12833 Helix-turn-helix domain 126 205 8.8E-21 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VFU_RS13920 f6936d666b05513faaa4b02c0065c2fb 209 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 157 200 - T 21-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VFU_RS11780 c7944257454bd59b3e840c331e96eb79 783 Gene3D G3DSA:3.40.50.300 309 498 3.0E-33 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS11780 c7944257454bd59b3e840c331e96eb79 783 SUPERFAMILY SSF52540 313 586 8.33E-51 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS11780 c7944257454bd59b3e840c331e96eb79 783 SUPERFAMILY SSF88697 10 200 9.44E-48 T 21-04-2016 IPR015947 PUA-like domain VFU_RS11780 c7944257454bd59b3e840c331e96eb79 783 Gene3D G3DSA:3.30.230.10 590 770 1.9E-75 T 21-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VFU_RS11780 c7944257454bd59b3e840c331e96eb79 783 SMART SM00464 10 201 1.5E-73 T 21-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 VFU_RS11780 c7944257454bd59b3e840c331e96eb79 783 TIGRFAM TIGR00763 lon: endopeptidase La 12 770 0.0 T 21-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 VFU_RS11780 c7944257454bd59b3e840c331e96eb79 783 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 196 1.1E-41 T 21-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 VFU_RS11780 c7944257454bd59b3e840c331e96eb79 783 SMART SM00382 347 491 6.2E-11 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS11780 c7944257454bd59b3e840c331e96eb79 783 Gene3D G3DSA:1.10.8.60 499 583 3.0E-33 T 21-04-2016 VFU_RS11780 c7944257454bd59b3e840c331e96eb79 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 355 374 3.6E-56 T 21-04-2016 VFU_RS11780 c7944257454bd59b3e840c331e96eb79 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 672 691 3.6E-56 T 21-04-2016 VFU_RS11780 c7944257454bd59b3e840c331e96eb79 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 725 743 3.6E-56 T 21-04-2016 VFU_RS11780 c7944257454bd59b3e840c331e96eb79 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 594 610 3.6E-56 T 21-04-2016 VFU_RS11780 c7944257454bd59b3e840c331e96eb79 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 702 721 3.6E-56 T 21-04-2016 VFU_RS11780 c7944257454bd59b3e840c331e96eb79 783 PANTHER PTHR10046:SF43 8 775 0.0 T 21-04-2016 VFU_RS11780 c7944257454bd59b3e840c331e96eb79 783 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 569 771 3.0E-98 T 21-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 VFU_RS11780 c7944257454bd59b3e840c331e96eb79 783 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 351 488 4.8E-17 T 21-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VFU_RS11780 c7944257454bd59b3e840c331e96eb79 783 SUPERFAMILY SSF54211 594 770 2.2E-58 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VFU_RS11780 c7944257454bd59b3e840c331e96eb79 783 PANTHER PTHR10046 8 775 0.0 T 21-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 VFU_RS11780 c7944257454bd59b3e840c331e96eb79 783 Hamap MF_01973 Lon protease [lon]. 11 771 71.848 T 21-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 VFU_RS11780 c7944257454bd59b3e840c331e96eb79 783 PIRSF PIRSF001174 1 774 0.0 T 21-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 VFU_RS04485 04f3cccd3e67d03b84c313504fc2c858 328 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 325 1.4E-38 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS04485 04f3cccd3e67d03b84c313504fc2c858 328 PANTHER PTHR30465 1 325 5.7E-115 T 21-04-2016 VFU_RS04485 04f3cccd3e67d03b84c313504fc2c858 328 PANTHER PTHR30465:SF24 1 325 5.7E-115 T 21-04-2016 VFU_RS04485 04f3cccd3e67d03b84c313504fc2c858 328 Gene3D G3DSA:1.10.3720.10 93 320 9.9E-17 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS04485 04f3cccd3e67d03b84c313504fc2c858 328 SUPERFAMILY SSF161098 93 324 2.88E-13 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS14820 f0c5dc4dcbb9d233ae5b055a59b41fe9 243 Pfam PF04452 RNA methyltransferase 19 236 6.9E-75 T 21-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VFU_RS14820 f0c5dc4dcbb9d233ae5b055a59b41fe9 243 PANTHER PTHR30027 1 243 7.0E-98 T 21-04-2016 VFU_RS14820 f0c5dc4dcbb9d233ae5b055a59b41fe9 243 SUPERFAMILY SSF88697 2 71 1.14E-15 T 21-04-2016 IPR015947 PUA-like domain VFU_RS14820 f0c5dc4dcbb9d233ae5b055a59b41fe9 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 3 242 7.4E-84 T 21-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VFU_RS14820 f0c5dc4dcbb9d233ae5b055a59b41fe9 243 Gene3D G3DSA:3.40.1280.10 75 242 1.2E-59 T 21-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VFU_RS14820 f0c5dc4dcbb9d233ae5b055a59b41fe9 243 PANTHER PTHR30027:SF3 1 243 7.0E-98 T 21-04-2016 VFU_RS14820 f0c5dc4dcbb9d233ae5b055a59b41fe9 243 SUPERFAMILY SSF75217 75 242 1.0E-51 T 21-04-2016 IPR029028 Alpha/beta knot methyltransferases VFU_RS14820 f0c5dc4dcbb9d233ae5b055a59b41fe9 243 Gene3D G3DSA:2.40.240.20 1 70 1.3E-23 T 21-04-2016 VFU_RS14820 f0c5dc4dcbb9d233ae5b055a59b41fe9 243 PIRSF PIRSF015601 3 242 3.4E-54 T 21-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VFU_RS12380 7f072bca143c7417279b991949b42bfa 182 PIRSF PIRSF000232 1 182 2.1E-61 T 21-04-2016 IPR026021 Putative NAD(P)H nitroreductase YdjA-like KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- VFU_RS12380 7f072bca143c7417279b991949b42bfa 182 Pfam PF00881 Nitroreductase family 8 161 1.4E-22 T 21-04-2016 IPR029479 Nitroreductase VFU_RS12380 7f072bca143c7417279b991949b42bfa 182 Gene3D G3DSA:3.40.109.10 1 181 2.6E-42 T 21-04-2016 IPR000415 Nitroreductase-like GO:0016491 VFU_RS12380 7f072bca143c7417279b991949b42bfa 182 PANTHER PTHR23026 1 175 1.6E-85 T 21-04-2016 VFU_RS12380 7f072bca143c7417279b991949b42bfa 182 SUPERFAMILY SSF55469 1 181 6.41E-42 T 21-04-2016 IPR000415 Nitroreductase-like GO:0016491 VFU_RS12380 7f072bca143c7417279b991949b42bfa 182 PANTHER PTHR23026:SF107 1 175 1.6E-85 T 21-04-2016 VFU_RS03670 79202ada7e1aaa0cc3b7074cf328d314 109 SUPERFAMILY SSF52091 1 97 3.92E-18 T 21-04-2016 IPR002645 STAS domain VFU_RS03670 79202ada7e1aaa0cc3b7074cf328d314 109 PANTHER PTHR35849:SF1 1 109 8.8E-41 T 21-04-2016 VFU_RS03670 79202ada7e1aaa0cc3b7074cf328d314 109 PANTHER PTHR35849 1 109 8.8E-41 T 21-04-2016 VFU_RS03670 79202ada7e1aaa0cc3b7074cf328d314 109 Gene3D G3DSA:3.30.750.24 10 96 2.1E-16 T 21-04-2016 IPR002645 STAS domain VFU_RS03670 79202ada7e1aaa0cc3b7074cf328d314 109 Pfam PF13466 STAS domain 16 93 2.8E-19 T 21-04-2016 IPR002645 STAS domain VFU_RS11380 eabb5bc365e3f670f7e9d399c52a93c9 450 SUPERFAMILY SSF52964 29 181 1.96E-42 T 21-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 VFU_RS11380 eabb5bc365e3f670f7e9d399c52a93c9 450 Pfam PF07676 WD40-like Beta Propeller Repeat 257 292 1.5E-7 T 21-04-2016 IPR011659 WD40-like Beta Propeller VFU_RS11380 eabb5bc365e3f670f7e9d399c52a93c9 450 Pfam PF07676 WD40-like Beta Propeller Repeat 222 248 5.0E-9 T 21-04-2016 IPR011659 WD40-like Beta Propeller VFU_RS11380 eabb5bc365e3f670f7e9d399c52a93c9 450 Pfam PF07676 WD40-like Beta Propeller Repeat 300 336 3.3E-13 T 21-04-2016 IPR011659 WD40-like Beta Propeller VFU_RS11380 eabb5bc365e3f670f7e9d399c52a93c9 450 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 17 447 1.1E-170 T 21-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 VFU_RS11380 eabb5bc365e3f670f7e9d399c52a93c9 450 Pfam PF04052 TolB amino-terminal domain 24 126 2.8E-36 T 21-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 VFU_RS11380 eabb5bc365e3f670f7e9d399c52a93c9 450 PANTHER PTHR11731:SF123 1 122 2.7E-121 T 21-04-2016 VFU_RS11380 eabb5bc365e3f670f7e9d399c52a93c9 450 Gene3D G3DSA:3.40.50.10070 24 171 8.9E-54 T 21-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 VFU_RS11380 eabb5bc365e3f670f7e9d399c52a93c9 450 PANTHER PTHR11731:SF123 180 448 2.7E-121 T 21-04-2016 VFU_RS11380 eabb5bc365e3f670f7e9d399c52a93c9 450 Hamap MF_00671 Protein TolB [tolB]. 5 446 35.893 T 21-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 VFU_RS11380 eabb5bc365e3f670f7e9d399c52a93c9 450 PANTHER PTHR11731 180 448 2.7E-121 T 21-04-2016 VFU_RS11380 eabb5bc365e3f670f7e9d399c52a93c9 450 PANTHER PTHR11731 1 122 2.7E-121 T 21-04-2016 VFU_RS11380 eabb5bc365e3f670f7e9d399c52a93c9 450 SUPERFAMILY SSF69304 176 448 4.58E-58 T 21-04-2016 VFU_RS11380 eabb5bc365e3f670f7e9d399c52a93c9 450 Gene3D G3DSA:2.130.10.10 172 448 1.7E-79 T 21-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 VFU_RS13780 3db20a9146b46d75614366d321860d5c 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 2.1E-16 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS13780 3db20a9146b46d75614366d321860d5c 296 PANTHER PTHR30126:SF11 5 292 2.3E-97 T 21-04-2016 VFU_RS13780 3db20a9146b46d75614366d321860d5c 296 Pfam PF03466 LysR substrate binding domain 90 293 1.3E-47 T 21-04-2016 IPR005119 LysR, substrate-binding VFU_RS13780 3db20a9146b46d75614366d321860d5c 296 SUPERFAMILY SSF46785 5 113 2.36E-19 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS13780 3db20a9146b46d75614366d321860d5c 296 SUPERFAMILY SSF53850 92 294 1.0E-40 T 21-04-2016 VFU_RS13780 3db20a9146b46d75614366d321860d5c 296 Gene3D G3DSA:1.10.10.10 5 87 1.5E-20 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS13780 3db20a9146b46d75614366d321860d5c 296 Gene3D G3DSA:3.40.190.10 93 178 7.3E-15 T 21-04-2016 VFU_RS13780 3db20a9146b46d75614366d321860d5c 296 PANTHER PTHR30126 5 292 2.3E-97 T 21-04-2016 VFU_RS13780 3db20a9146b46d75614366d321860d5c 296 Gene3D G3DSA:3.40.190.10 179 262 5.0E-19 T 21-04-2016 VFU_RS13780 3db20a9146b46d75614366d321860d5c 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.4E-5 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS13780 3db20a9146b46d75614366d321860d5c 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.4E-5 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS13780 3db20a9146b46d75614366d321860d5c 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.4E-5 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS13585 4e5ad62b15762e3a418d8141ec254dd3 352 PANTHER PTHR30307:SF0 2 352 2.3E-186 T 21-04-2016 VFU_RS13585 4e5ad62b15762e3a418d8141ec254dd3 352 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 345 5.2E-161 T 21-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 VFU_RS13585 4e5ad62b15762e3a418d8141ec254dd3 352 Gene3D G3DSA:3.40.1780.10 1 62 1.8E-102 T 21-04-2016 VFU_RS13585 4e5ad62b15762e3a418d8141ec254dd3 352 Gene3D G3DSA:3.40.1780.10 179 345 1.8E-102 T 21-04-2016 VFU_RS13585 4e5ad62b15762e3a418d8141ec254dd3 352 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 346 47.388 T 21-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 VFU_RS13585 4e5ad62b15762e3a418d8141ec254dd3 352 Gene3D G3DSA:2.40.10.240 64 142 8.7E-17 T 21-04-2016 VFU_RS13585 4e5ad62b15762e3a418d8141ec254dd3 352 PANTHER PTHR30307 2 352 2.3E-186 T 21-04-2016 VFU_RS13585 4e5ad62b15762e3a418d8141ec254dd3 352 Pfam PF02547 Queuosine biosynthesis protein 3 345 2.0E-134 T 21-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 VFU_RS13585 4e5ad62b15762e3a418d8141ec254dd3 352 SUPERFAMILY SSF111337 1 345 5.49E-141 T 21-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 VFU_RS10880 276e0abbf7afb5d112d69754515e0add 764 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 315 8.8E-118 T 21-04-2016 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 VFU_RS10880 276e0abbf7afb5d112d69754515e0add 764 PANTHER PTHR30519 1 763 0.0 T 21-04-2016 VFU_RS10880 276e0abbf7afb5d112d69754515e0add 764 Gene3D G3DSA:3.20.20.210 4 386 2.5E-146 T 21-04-2016 VFU_RS10880 276e0abbf7afb5d112d69754515e0add 764 Gene3D G3DSA:3.20.20.210 392 758 6.0E-128 T 21-04-2016 VFU_RS10880 276e0abbf7afb5d112d69754515e0add 764 PIRSF PIRSF000382 2 763 0.0 T 21-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 VFU_RS10880 276e0abbf7afb5d112d69754515e0add 764 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 431 753 2.7E-149 T 21-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 VFU_RS10880 276e0abbf7afb5d112d69754515e0add 764 PANTHER PTHR30519:SF0 1 763 0.0 T 21-04-2016 VFU_RS10880 276e0abbf7afb5d112d69754515e0add 764 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 758 35.732 T 21-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 VFU_RS10880 276e0abbf7afb5d112d69754515e0add 764 SUPERFAMILY SSF51726 5 393 2.09E-107 T 21-04-2016 VFU_RS10880 276e0abbf7afb5d112d69754515e0add 764 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 757 0.0 T 21-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 VFU_RS10880 276e0abbf7afb5d112d69754515e0add 764 SUPERFAMILY SSF51726 396 757 3.01E-113 T 21-04-2016 VFU_RS11920 612292f90b24d7132ac74a680bf0625c 521 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 426 515 1.8E-6 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS11920 612292f90b24d7132ac74a680bf0625c 521 Pfam PF07730 Histidine kinase 321 384 2.4E-12 T 21-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 VFU_RS11920 612292f90b24d7132ac74a680bf0625c 521 Gene3D G3DSA:3.30.565.10 396 517 1.3E-7 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS11920 612292f90b24d7132ac74a680bf0625c 521 PRINTS PR00344 Bacterial sensor protein C-terminal signature 475 493 4.2E-5 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS11920 612292f90b24d7132ac74a680bf0625c 521 PRINTS PR00344 Bacterial sensor protein C-terminal signature 459 473 4.2E-5 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS11920 612292f90b24d7132ac74a680bf0625c 521 PRINTS PR00344 Bacterial sensor protein C-terminal signature 501 514 4.2E-5 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS11920 612292f90b24d7132ac74a680bf0625c 521 PANTHER PTHR24421:SF1 176 518 2.6E-72 T 21-04-2016 VFU_RS11920 612292f90b24d7132ac74a680bf0625c 521 SMART SM00387 424 517 1.2E-7 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS11920 612292f90b24d7132ac74a680bf0625c 521 SUPERFAMILY SSF55874 427 517 9.43E-17 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS11920 612292f90b24d7132ac74a680bf0625c 521 PANTHER PTHR24421 176 518 2.6E-72 T 21-04-2016 VFU_RS11920 612292f90b24d7132ac74a680bf0625c 521 Pfam PF05231 MASE1 9 286 6.3E-40 T 21-04-2016 IPR007895 MASE1 VFU_RS11415 81cb0a66349eba7a80a266906c73a5a4 378 PANTHER PTHR30365 1 378 2.0E-192 T 21-04-2016 VFU_RS11415 81cb0a66349eba7a80a266906c73a5a4 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 2.2E-172 T 21-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VFU_RS11415 81cb0a66349eba7a80a266906c73a5a4 378 PIRSF PIRSF000267 2 377 1.3E-124 T 21-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VFU_RS11415 81cb0a66349eba7a80a266906c73a5a4 378 PANTHER PTHR30365:SF6 1 378 2.0E-192 T 21-04-2016 VFU_RS11415 81cb0a66349eba7a80a266906c73a5a4 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 361 6.0E-108 T 21-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VFU_RS05855 3fb03f9b03f78229c3951eb596011d24 543 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 44 462 1.2E-126 T 21-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 VFU_RS05855 3fb03f9b03f78229c3951eb596011d24 543 PANTHER PTHR11819:SF7 9 501 4.6E-148 T 21-04-2016 VFU_RS05855 3fb03f9b03f78229c3951eb596011d24 543 PANTHER PTHR11819 9 501 4.6E-148 T 21-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 VFU_RS05855 3fb03f9b03f78229c3951eb596011d24 543 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 159 184 - T 21-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 VFU_RS05855 3fb03f9b03f78229c3951eb596011d24 543 Pfam PF00474 Sodium:solute symporter family 44 461 1.6E-72 T 21-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 VFU_RS00450 d17e4fa9a0d3394d7f6ac493237fa213 633 SUPERFAMILY SSF55804 1 145 3.4E-36 T 21-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 VFU_RS00450 d17e4fa9a0d3394d7f6ac493237fa213 633 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 5 131 8.3E-39 T 21-04-2016 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VFU_RS00450 d17e4fa9a0d3394d7f6ac493237fa213 633 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 165 253 3.5E-14 T 21-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VFU_RS00450 d17e4fa9a0d3394d7f6ac493237fa213 633 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 276 618 5.2E-87 T 21-04-2016 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 VFU_RS00450 d17e4fa9a0d3394d7f6ac493237fa213 633 SUPERFAMILY SSF52794 162 257 1.55E-32 T 21-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VFU_RS00450 d17e4fa9a0d3394d7f6ac493237fa213 633 Gene3D G3DSA:3.40.50.2300 161 257 1.5E-37 T 21-04-2016 VFU_RS00450 d17e4fa9a0d3394d7f6ac493237fa213 633 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 4 146 4.4E-35 T 21-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VFU_RS00450 d17e4fa9a0d3394d7f6ac493237fa213 633 Pfam PF02378 Phosphotransferase system, EIIC 290 566 5.1E-14 T 21-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VFU_RS00450 d17e4fa9a0d3394d7f6ac493237fa213 633 PANTHER PTHR30505 42 590 0.0 T 21-04-2016 VFU_RS00450 d17e4fa9a0d3394d7f6ac493237fa213 633 Gene3D G3DSA:3.40.930.10 1 146 3.7E-45 T 21-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VFU_RS00450 d17e4fa9a0d3394d7f6ac493237fa213 633 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 163 245 7.7E-28 T 21-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 VFU_RS00450 d17e4fa9a0d3394d7f6ac493237fa213 633 PANTHER PTHR30505:SF1 42 590 0.0 T 21-04-2016 VFU_RS02400 98b3dbdb7c3aa37c1f9a563815e093cc 807 Pfam PF01553 Acyltransferase 289 424 2.1E-23 T 21-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VFU_RS02400 98b3dbdb7c3aa37c1f9a563815e093cc 807 PIRSF PIRSF000437 19 807 0.0 T 21-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 VFU_RS02400 98b3dbdb7c3aa37c1f9a563815e093cc 807 PANTHER PTHR12563 1 118 0.0 T 21-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 VFU_RS02400 98b3dbdb7c3aa37c1f9a563815e093cc 807 PANTHER PTHR12563 144 803 0.0 T 21-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 VFU_RS02400 98b3dbdb7c3aa37c1f9a563815e093cc 807 PANTHER PTHR12563:SF14 1 118 0.0 T 21-04-2016 VFU_RS02400 98b3dbdb7c3aa37c1f9a563815e093cc 807 PANTHER PTHR12563:SF14 144 803 0.0 T 21-04-2016 VFU_RS02400 98b3dbdb7c3aa37c1f9a563815e093cc 807 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 799 0.0 T 21-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 VFU_RS02400 98b3dbdb7c3aa37c1f9a563815e093cc 807 SMART SM00563 300 427 1.2E-26 T 21-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VFU_RS02400 98b3dbdb7c3aa37c1f9a563815e093cc 807 SUPERFAMILY SSF69593 283 507 1.24E-25 T 21-04-2016 VFU_RS02400 98b3dbdb7c3aa37c1f9a563815e093cc 807 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 807 31.831 T 21-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 VFU_RS02400 98b3dbdb7c3aa37c1f9a563815e093cc 807 PIRSF PIRSF500064 2 807 0.0 T 21-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 VFU_RS07690 a2fe1a8bc033122b51a7208f982101de 322 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 130 303 5.6E-22 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS07690 a2fe1a8bc033122b51a7208f982101de 322 SUPERFAMILY SSF161098 106 304 1.13E-25 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS07690 a2fe1a8bc033122b51a7208f982101de 322 PANTHER PTHR30151 108 322 3.0E-92 T 21-04-2016 VFU_RS07690 a2fe1a8bc033122b51a7208f982101de 322 PANTHER PTHR30151 18 68 3.0E-92 T 21-04-2016 VFU_RS07690 a2fe1a8bc033122b51a7208f982101de 322 PANTHER PTHR30151:SF7 108 322 3.0E-92 T 21-04-2016 VFU_RS07690 a2fe1a8bc033122b51a7208f982101de 322 PANTHER PTHR30151:SF7 18 68 3.0E-92 T 21-04-2016 VFU_RS07690 a2fe1a8bc033122b51a7208f982101de 322 Gene3D G3DSA:1.10.3720.10 105 313 9.3E-22 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS04195 788c6327fe6c4dc020060be4ed3f8afc 261 Gene3D G3DSA:1.10.287.70 127 173 1.9E-16 T 21-04-2016 VFU_RS04195 788c6327fe6c4dc020060be4ed3f8afc 261 SUPERFAMILY SSF81324 8 210 1.07E-45 T 21-04-2016 VFU_RS04195 788c6327fe6c4dc020060be4ed3f8afc 261 PANTHER PTHR11537:SF14 13 260 1.1E-24 T 21-04-2016 VFU_RS04195 788c6327fe6c4dc020060be4ed3f8afc 261 Gene3D G3DSA:1.20.120.350 13 126 1.1E-15 T 21-04-2016 IPR027359 Voltage-dependent channel, four helix bundle domain VFU_RS04195 788c6327fe6c4dc020060be4ed3f8afc 261 PANTHER PTHR11537 13 260 1.1E-24 T 21-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VFU_RS04195 788c6327fe6c4dc020060be4ed3f8afc 261 PRINTS PR00169 Potassium channel signature 154 176 2.2E-9 T 21-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VFU_RS04195 788c6327fe6c4dc020060be4ed3f8afc 261 PRINTS PR00169 Potassium channel signature 123 146 2.2E-9 T 21-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VFU_RS04195 788c6327fe6c4dc020060be4ed3f8afc 261 PRINTS PR00169 Potassium channel signature 183 209 2.2E-9 T 21-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VFU_RS04195 788c6327fe6c4dc020060be4ed3f8afc 261 Pfam PF00520 Ion transport protein 47 208 1.5E-15 T 21-04-2016 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 VFU_RS04195 788c6327fe6c4dc020060be4ed3f8afc 261 Gene3D G3DSA:1.20.5.110 175 216 1.3E-17 T 21-04-2016 VFU_RS14195 5bbc0d1588b2553b02bd46e8fe96147e 904 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 20.039 T 21-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VFU_RS14195 5bbc0d1588b2553b02bd46e8fe96147e 904 SMART SM00957 6 403 0.0 T 21-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 VFU_RS14195 5bbc0d1588b2553b02bd46e8fe96147e 904 PRINTS PR00906 SecA protein signature 101 115 2.2E-72 T 21-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VFU_RS14195 5bbc0d1588b2553b02bd46e8fe96147e 904 PRINTS PR00906 SecA protein signature 63 87 2.2E-72 T 21-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VFU_RS14195 5bbc0d1588b2553b02bd46e8fe96147e 904 PRINTS PR00906 SecA protein signature 414 427 2.2E-72 T 21-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VFU_RS14195 5bbc0d1588b2553b02bd46e8fe96147e 904 PRINTS PR00906 SecA protein signature 340 362 2.2E-72 T 21-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VFU_RS14195 5bbc0d1588b2553b02bd46e8fe96147e 904 PRINTS PR00906 SecA protein signature 170 190 2.2E-72 T 21-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VFU_RS14195 5bbc0d1588b2553b02bd46e8fe96147e 904 PRINTS PR00906 SecA protein signature 377 394 2.2E-72 T 21-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VFU_RS14195 5bbc0d1588b2553b02bd46e8fe96147e 904 PRINTS PR00906 SecA protein signature 117 127 2.2E-72 T 21-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VFU_RS14195 5bbc0d1588b2553b02bd46e8fe96147e 904 Gene3D G3DSA:3.40.50.300 418 619 1.2E-88 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS14195 5bbc0d1588b2553b02bd46e8fe96147e 904 SMART SM00958 228 359 8.5E-83 T 21-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 VFU_RS14195 5bbc0d1588b2553b02bd46e8fe96147e 904 Gene3D G3DSA:3.90.1440.10 230 369 1.1E-46 T 21-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 VFU_RS14195 5bbc0d1588b2553b02bd46e8fe96147e 904 PANTHER PTHR30612 551 904 0.0 T 21-04-2016 VFU_RS14195 5bbc0d1588b2553b02bd46e8fe96147e 904 PANTHER PTHR30612 1 521 0.0 T 21-04-2016 VFU_RS14195 5bbc0d1588b2553b02bd46e8fe96147e 904 Gene3D G3DSA:1.10.3060.10 648 831 2.8E-58 T 21-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 VFU_RS14195 5bbc0d1588b2553b02bd46e8fe96147e 904 SUPERFAMILY SSF81767 227 369 2.75E-43 T 21-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 VFU_RS14195 5bbc0d1588b2553b02bd46e8fe96147e 904 SUPERFAMILY SSF52540 418 610 2.66E-56 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS14195 5bbc0d1588b2553b02bd46e8fe96147e 904 SUPERFAMILY SSF52540 369 416 4.56E-86 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS14195 5bbc0d1588b2553b02bd46e8fe96147e 904 SUPERFAMILY SSF52540 5 228 4.56E-86 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS14195 5bbc0d1588b2553b02bd46e8fe96147e 904 ProSitePatterns PS01312 SecA family signature. 501 516 - T 21-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 VFU_RS14195 5bbc0d1588b2553b02bd46e8fe96147e 904 Gene3D G3DSA:3.40.50.300 370 417 1.5E-126 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS14195 5bbc0d1588b2553b02bd46e8fe96147e 904 Gene3D G3DSA:3.40.50.300 2 228 1.5E-126 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS14195 5bbc0d1588b2553b02bd46e8fe96147e 904 Pfam PF01043 SecA preprotein cross-linking domain 232 359 9.7E-39 T 21-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 VFU_RS14195 5bbc0d1588b2553b02bd46e8fe96147e 904 Pfam PF07516 SecA Wing and Scaffold domain 617 829 1.9E-66 T 21-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 VFU_RS14195 5bbc0d1588b2553b02bd46e8fe96147e 904 Pfam PF02810 SEC-C motif 884 902 2.8E-10 T 21-04-2016 IPR004027 SEC-C motif VFU_RS14195 5bbc0d1588b2553b02bd46e8fe96147e 904 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 817 0.0 T 21-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VFU_RS14195 5bbc0d1588b2553b02bd46e8fe96147e 904 Pfam PF07517 SecA DEAD-like domain 7 403 8.7E-134 T 21-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 VFU_RS14195 5bbc0d1588b2553b02bd46e8fe96147e 904 SUPERFAMILY SSF81886 620 840 8.5E-84 T 21-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 VFU_RS14195 5bbc0d1588b2553b02bd46e8fe96147e 904 SUPERFAMILY SSF81886 880 892 8.5E-84 T 21-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 VFU_RS11860 8947ec606106cc8f962ff8d0b912f7de 509 SUPERFAMILY SSF55729 5 139 8.58E-17 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase VFU_RS11860 8947ec606106cc8f962ff8d0b912f7de 509 PANTHER PTHR23088:SF12 208 509 3.4E-127 T 21-04-2016 VFU_RS11860 8947ec606106cc8f962ff8d0b912f7de 509 SUPERFAMILY SSF56317 222 491 2.62E-58 T 21-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VFU_RS11860 8947ec606106cc8f962ff8d0b912f7de 509 Pfam PF00795 Carbon-nitrogen hydrolase 226 485 1.5E-31 T 21-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VFU_RS11860 8947ec606106cc8f962ff8d0b912f7de 509 PANTHER PTHR23088 208 509 3.4E-127 T 21-04-2016 VFU_RS11860 8947ec606106cc8f962ff8d0b912f7de 509 Gene3D G3DSA:3.40.630.30 8 141 1.3E-18 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase VFU_RS11860 8947ec606106cc8f962ff8d0b912f7de 509 Gene3D G3DSA:3.60.110.10 220 505 1.1E-59 T 21-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VFU_RS11860 8947ec606106cc8f962ff8d0b912f7de 509 Pfam PF00583 Acetyltransferase (GNAT) family 56 138 1.1E-5 T 21-04-2016 IPR000182 GNAT domain GO:0008080 VFU_RS13465 0b2690dbaa2e5a4001228a6c44d884f9 495 PANTHER PTHR11649 189 465 5.1E-161 T 21-04-2016 VFU_RS13465 0b2690dbaa2e5a4001228a6c44d884f9 495 PANTHER PTHR11649 1 167 5.1E-161 T 21-04-2016 VFU_RS13465 0b2690dbaa2e5a4001228a6c44d884f9 495 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 205 371 5.0E-25 T 21-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VFU_RS13465 0b2690dbaa2e5a4001228a6c44d884f9 495 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 156 7.3E-21 T 21-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VFU_RS13465 0b2690dbaa2e5a4001228a6c44d884f9 495 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 462 1.4E-180 T 21-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 VFU_RS13465 0b2690dbaa2e5a4001228a6c44d884f9 495 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 382 461 2.2E-26 T 21-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like VFU_RS13465 0b2690dbaa2e5a4001228a6c44d884f9 495 SUPERFAMILY SSF52540 184 468 3.0E-62 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS13465 0b2690dbaa2e5a4001228a6c44d884f9 495 PIRSF PIRSF006485 1 470 7.5E-182 T 21-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 VFU_RS13465 0b2690dbaa2e5a4001228a6c44d884f9 495 Gene3D G3DSA:3.40.50.300 2 171 1.0E-48 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS13465 0b2690dbaa2e5a4001228a6c44d884f9 495 Gene3D G3DSA:3.40.50.300 202 387 5.4E-55 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS13465 0b2690dbaa2e5a4001228a6c44d884f9 495 SUPERFAMILY SSF52540 4 169 2.12E-44 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS13465 0b2690dbaa2e5a4001228a6c44d884f9 495 Hamap MF_00195 GTPase Der [der]. 2 465 39.104 T 21-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 VFU_RS13465 0b2690dbaa2e5a4001228a6c44d884f9 495 PANTHER PTHR11649:SF5 189 465 5.1E-161 T 21-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 VFU_RS13465 0b2690dbaa2e5a4001228a6c44d884f9 495 PANTHER PTHR11649:SF5 1 167 5.1E-161 T 21-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 VFU_RS13465 0b2690dbaa2e5a4001228a6c44d884f9 495 Gene3D G3DSA:3.30.300.20 388 464 1.0E-23 T 21-04-2016 IPR015946 K homology domain-like, alpha/beta VFU_RS13465 0b2690dbaa2e5a4001228a6c44d884f9 495 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.2E-9 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 VFU_RS13465 0b2690dbaa2e5a4001228a6c44d884f9 495 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 1.2E-9 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 VFU_RS13465 0b2690dbaa2e5a4001228a6c44d884f9 495 SMART SM00382 205 348 0.095 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS13465 0b2690dbaa2e5a4001228a6c44d884f9 495 SMART SM00382 1 173 2.1 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS13465 0b2690dbaa2e5a4001228a6c44d884f9 495 Pfam PF01926 50S ribosome-binding GTPase 5 119 3.9E-27 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 VFU_RS13465 0b2690dbaa2e5a4001228a6c44d884f9 495 Pfam PF01926 50S ribosome-binding GTPase 209 326 1.4E-24 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 VFU_RS12830 a78ec695bd1345be2ef77148fc2e131a 511 Gene3D G3DSA:3.60.110.10 213 480 1.1E-24 T 21-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VFU_RS12830 a78ec695bd1345be2ef77148fc2e131a 511 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 8 490 23.652 T 21-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 VFU_RS12830 a78ec695bd1345be2ef77148fc2e131a 511 SUPERFAMILY SSF56317 213 486 4.06E-44 T 21-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VFU_RS12830 a78ec695bd1345be2ef77148fc2e131a 511 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 61 453 8.2E-98 T 21-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 VFU_RS12830 a78ec695bd1345be2ef77148fc2e131a 511 PANTHER PTHR38686 1 509 1.2E-120 T 21-04-2016 VFU_RS12830 a78ec695bd1345be2ef77148fc2e131a 511 Pfam PF00795 Carbon-nitrogen hydrolase 221 470 2.2E-39 T 21-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VFU_RS09985 64d5847b27e33784227067caa34b8c12 766 SUPERFAMILY SSF55821 173 398 1.37E-45 T 21-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain VFU_RS09985 64d5847b27e33784227067caa34b8c12 766 PANTHER PTHR10029:SF4 1 759 1.7E-292 T 21-04-2016 VFU_RS09985 64d5847b27e33784227067caa34b8c12 766 PIRSF PIRSF006256 1 765 5.4E-262 T 21-04-2016 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 UniPathway: UPA00335 VFU_RS09985 64d5847b27e33784227067caa34b8c12 766 Pfam PF07503 HypF finger 106 139 7.6E-17 T 21-04-2016 IPR011125 Zinc finger, HypF-type GO:0008270 UniPathway: UPA00335 VFU_RS09985 64d5847b27e33784227067caa34b8c12 766 Pfam PF07503 HypF finger 156 188 1.8E-15 T 21-04-2016 IPR011125 Zinc finger, HypF-type GO:0008270 UniPathway: UPA00335 VFU_RS09985 64d5847b27e33784227067caa34b8c12 766 ProSitePatterns PS00150 Acylphosphatase signature 1. 8 18 - T 21-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VFU_RS09985 64d5847b27e33784227067caa34b8c12 766 Pfam PF00708 Acylphosphatase 2 87 3.0E-23 T 21-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VFU_RS09985 64d5847b27e33784227067caa34b8c12 766 Gene3D G3DSA:3.30.70.100 1 87 1.7E-26 T 21-04-2016 VFU_RS09985 64d5847b27e33784227067caa34b8c12 766 Pfam PF01300 Telomere recombination 210 392 6.2E-50 T 21-04-2016 IPR006070 YrdC-like domain GO:0003725 VFU_RS09985 64d5847b27e33784227067caa34b8c12 766 SUPERFAMILY SSF54975 1 88 2.83E-24 T 21-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VFU_RS09985 64d5847b27e33784227067caa34b8c12 766 Gene3D G3DSA:3.90.870.10 200 387 4.6E-44 T 21-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain VFU_RS09985 64d5847b27e33784227067caa34b8c12 766 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 6 758 1.8E-225 T 21-04-2016 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 UniPathway: UPA00335 VFU_RS09985 64d5847b27e33784227067caa34b8c12 766 PANTHER PTHR10029 1 759 1.7E-292 T 21-04-2016 VFU_RS11120 2fa6d87c6d6fcbfbdefedbb6131e056a 549 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 300 329 3.8E-10 T 21-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VFU_RS11120 2fa6d87c6d6fcbfbdefedbb6131e056a 549 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 413 442 3.8E-10 T 21-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VFU_RS11120 2fa6d87c6d6fcbfbdefedbb6131e056a 549 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 461 490 3.8E-10 T 21-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VFU_RS11120 2fa6d87c6d6fcbfbdefedbb6131e056a 549 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 187 2.9E-18 T 21-04-2016 IPR024478 4HB MCP domain VFU_RS11120 2fa6d87c6d6fcbfbdefedbb6131e056a 549 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 347 546 1.4E-47 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VFU_RS11120 2fa6d87c6d6fcbfbdefedbb6131e056a 549 PANTHER PTHR32089 184 549 1.4E-139 T 21-04-2016 VFU_RS11120 2fa6d87c6d6fcbfbdefedbb6131e056a 549 Gene3D G3DSA:1.10.287.950 301 518 6.9E-58 T 21-04-2016 VFU_RS11120 2fa6d87c6d6fcbfbdefedbb6131e056a 549 Pfam PF00672 HAMP domain 199 267 5.7E-7 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS11120 2fa6d87c6d6fcbfbdefedbb6131e056a 549 PANTHER PTHR32089:SF39 184 549 1.4E-139 T 21-04-2016 VFU_RS11120 2fa6d87c6d6fcbfbdefedbb6131e056a 549 SMART SM00283 286 547 6.9E-92 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VFU_RS11120 2fa6d87c6d6fcbfbdefedbb6131e056a 549 SUPERFAMILY SSF58104 240 548 1.14E-75 T 21-04-2016 VFU_RS10175 f2331b98a5db5f12cb6c7dfd476f7a0a 204 PANTHER PTHR23416 1 202 1.2E-67 T 21-04-2016 VFU_RS10175 f2331b98a5db5f12cb6c7dfd476f7a0a 204 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 129 164 8.9E-13 T 21-04-2016 IPR001451 Hexapeptide repeat VFU_RS10175 f2331b98a5db5f12cb6c7dfd476f7a0a 204 SUPERFAMILY SSF51161 2 194 2.08E-55 T 21-04-2016 IPR011004 Trimeric LpxA-like VFU_RS10175 f2331b98a5db5f12cb6c7dfd476f7a0a 204 PANTHER PTHR23416:SF58 1 202 1.2E-67 T 21-04-2016 VFU_RS10175 f2331b98a5db5f12cb6c7dfd476f7a0a 204 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 138 166 - T 21-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 VFU_RS10175 f2331b98a5db5f12cb6c7dfd476f7a0a 204 Gene3D G3DSA:2.160.10.10 2 188 1.0E-60 T 21-04-2016 VFU_RS10175 f2331b98a5db5f12cb6c7dfd476f7a0a 204 SMART SM01266 4 58 4.7E-16 T 21-04-2016 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 VFU_RS10175 f2331b98a5db5f12cb6c7dfd476f7a0a 204 Pfam PF12464 Maltose acetyltransferase 6 57 5.9E-12 T 21-04-2016 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 VFU_RS10805 ee9f9a709f4cac4d046b4d3414ed7df1 423 PANTHER PTHR28004 312 416 3.0E-69 T 21-04-2016 VFU_RS10805 ee9f9a709f4cac4d046b4d3414ed7df1 423 PANTHER PTHR28004 36 296 3.0E-69 T 21-04-2016 VFU_RS10805 ee9f9a709f4cac4d046b4d3414ed7df1 423 Gene3D G3DSA:3.20.20.10 88 239 8.1E-13 T 21-04-2016 IPR029066 PLP-binding barrel VFU_RS10805 ee9f9a709f4cac4d046b4d3414ed7df1 423 PANTHER PTHR28004:SF1 312 416 3.0E-69 T 21-04-2016 VFU_RS10805 ee9f9a709f4cac4d046b4d3414ed7df1 423 PANTHER PTHR28004:SF1 36 296 3.0E-69 T 21-04-2016 VFU_RS10805 ee9f9a709f4cac4d046b4d3414ed7df1 423 SMART SM01119 314 410 2.6E-31 T 21-04-2016 IPR026956 D-serine dehydratase-like domain VFU_RS10805 ee9f9a709f4cac4d046b4d3414ed7df1 423 Pfam PF14031 Putative serine dehydratase domain 314 408 3.7E-15 T 21-04-2016 IPR026956 D-serine dehydratase-like domain VFU_RS10805 ee9f9a709f4cac4d046b4d3414ed7df1 423 Pfam PF01168 Alanine racemase, N-terminal domain 51 276 8.1E-14 T 21-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VFU_RS10805 ee9f9a709f4cac4d046b4d3414ed7df1 423 SUPERFAMILY SSF51419 51 283 4.19E-32 T 21-04-2016 IPR029066 PLP-binding barrel VFU_RS05735 153ae454c817259b9058d96100a79230 416 Pfam PF00860 Permease family 3 371 2.0E-91 T 21-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 VFU_RS05735 153ae454c817259b9058d96100a79230 416 PANTHER PTHR11119:SF49 1 413 3.9E-172 T 21-04-2016 VFU_RS05735 153ae454c817259b9058d96100a79230 416 PANTHER PTHR11119 1 413 3.9E-172 T 21-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 VFU_RS05735 153ae454c817259b9058d96100a79230 416 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 3 395 3.8E-111 T 21-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 VFU_RS05735 153ae454c817259b9058d96100a79230 416 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 319 339 - T 21-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 VFU_RS10390 4005a9ccd500d2d1b7d110c7ce66d175 391 SUPERFAMILY SSF52440 2 110 2.16E-34 T 21-04-2016 IPR016185 Pre-ATP-grasp domain VFU_RS10390 4005a9ccd500d2d1b7d110c7ce66d175 391 PANTHER PTHR11609:SF7 1 381 3.4E-224 T 21-04-2016 VFU_RS10390 4005a9ccd500d2d1b7d110c7ce66d175 391 SUPERFAMILY SSF51246 317 389 4.39E-18 T 21-04-2016 IPR011054 Rudiment single hybrid motif VFU_RS10390 4005a9ccd500d2d1b7d110c7ce66d175 391 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 12 390 3.1E-193 T 21-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 VFU_RS10390 4005a9ccd500d2d1b7d110c7ce66d175 391 Gene3D G3DSA:3.30.470.20 197 387 3.3E-71 T 21-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VFU_RS10390 4005a9ccd500d2d1b7d110c7ce66d175 391 SUPERFAMILY SSF56059 111 313 9.19E-58 T 21-04-2016 VFU_RS10390 4005a9ccd500d2d1b7d110c7ce66d175 391 Pfam PF02222 ATP-grasp domain 121 292 6.5E-57 T 21-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 VFU_RS10390 4005a9ccd500d2d1b7d110c7ce66d175 391 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 6 390 51.85 T 21-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 VFU_RS10390 4005a9ccd500d2d1b7d110c7ce66d175 391 Gene3D G3DSA:3.40.50.20 3 118 1.8E-39 T 21-04-2016 IPR016185 Pre-ATP-grasp domain VFU_RS10390 4005a9ccd500d2d1b7d110c7ce66d175 391 Gene3D G3DSA:3.30.1490.20 121 196 1.7E-25 T 21-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VFU_RS10390 4005a9ccd500d2d1b7d110c7ce66d175 391 PANTHER PTHR11609 1 381 3.4E-224 T 21-04-2016 VFU_RS06415 8e9e29f3171e72f7ac9e474ce0a417d4 71 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 2.1E-20 T 21-04-2016 IPR009857 Uncharacterised protein family UPF0352 VFU_RS06415 8e9e29f3171e72f7ac9e474ce0a417d4 71 Gene3D G3DSA:1.10.3390.10 1 70 4.2E-33 T 21-04-2016 IPR023202 YejL-like domain VFU_RS06415 8e9e29f3171e72f7ac9e474ce0a417d4 71 PIRSF PIRSF006188 1 71 9.5E-36 T 21-04-2016 IPR009857 Uncharacterised protein family UPF0352 VFU_RS06415 8e9e29f3171e72f7ac9e474ce0a417d4 71 SUPERFAMILY SSF158651 1 70 1.02E-28 T 21-04-2016 VFU_RS06415 8e9e29f3171e72f7ac9e474ce0a417d4 71 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 9.0E-29 T 21-04-2016 IPR009857 Uncharacterised protein family UPF0352 VFU_RS06415 8e9e29f3171e72f7ac9e474ce0a417d4 71 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 23.25 T 21-04-2016 IPR009857 Uncharacterised protein family UPF0352 VFU_RS10065 105106aef1ee1e6b81db879d5cdb21cf 467 Pfam PF03841 L-seryl-tRNA selenium transferase 90 442 5.5E-94 T 21-04-2016 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 VFU_RS10065 105106aef1ee1e6b81db879d5cdb21cf 467 PANTHER PTHR32328:SF0 10 463 1.4E-106 T 21-04-2016 VFU_RS10065 105106aef1ee1e6b81db879d5cdb21cf 467 Pfam PF12390 Selenocysteine synthase N terminal 19 56 9.0E-6 T 21-04-2016 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 VFU_RS10065 105106aef1ee1e6b81db879d5cdb21cf 467 PANTHER PTHR32328 10 463 1.4E-106 T 21-04-2016 VFU_RS10065 105106aef1ee1e6b81db879d5cdb21cf 467 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 460 142.732 T 21-04-2016 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 VFU_RS10065 105106aef1ee1e6b81db879d5cdb21cf 467 SUPERFAMILY SSF53383 81 460 7.8E-39 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VFU_RS10065 105106aef1ee1e6b81db879d5cdb21cf 467 Gene3D G3DSA:3.40.640.10 87 323 5.6E-25 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VFU_RS10065 105106aef1ee1e6b81db879d5cdb21cf 467 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 19 454 4.5E-135 T 21-04-2016 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 VFU_RS05045 035f235bbc566320a97e566779f19d31 102 Pfam PF01722 BolA-like protein 10 83 2.3E-31 T 21-04-2016 IPR002634 BolA protein VFU_RS05045 035f235bbc566320a97e566779f19d31 102 Gene3D G3DSA:3.30.300.90 1 101 8.8E-34 T 21-04-2016 IPR002634 BolA protein VFU_RS05045 035f235bbc566320a97e566779f19d31 102 PANTHER PTHR12735:SF23 1 102 3.5E-53 T 21-04-2016 VFU_RS05045 035f235bbc566320a97e566779f19d31 102 PIRSF PIRSF003113 1 99 1.7E-37 T 21-04-2016 IPR002634 BolA protein VFU_RS05045 035f235bbc566320a97e566779f19d31 102 SUPERFAMILY SSF82657 1 87 2.49E-32 T 21-04-2016 IPR002634 BolA protein VFU_RS05045 035f235bbc566320a97e566779f19d31 102 PANTHER PTHR12735 1 102 3.5E-53 T 21-04-2016 VFU_RS04010 14550d2676e1412eb947b37c7b5a2414 409 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 21-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VFU_RS04010 14550d2676e1412eb947b37c7b5a2414 409 PANTHER PTHR10996:SF18 1 369 2.2E-243 T 21-04-2016 IPR029015 D-3-phosphoglycerate dehydrogenase, type2 GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|UniPathway: UPA00135 VFU_RS04010 14550d2676e1412eb947b37c7b5a2414 409 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 21-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 VFU_RS04010 14550d2676e1412eb947b37c7b5a2414 409 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 326 2.1E-38 T 21-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 VFU_RS04010 14550d2676e1412eb947b37c7b5a2414 409 SUPERFAMILY SSF51735 108 295 7.81E-59 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS04010 14550d2676e1412eb947b37c7b5a2414 409 Gene3D G3DSA:3.40.50.720 120 297 1.5E-64 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS04010 14550d2676e1412eb947b37c7b5a2414 409 Gene3D G3DSA:3.40.50.720 8 119 3.1E-37 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS04010 14550d2676e1412eb947b37c7b5a2414 409 Gene3D G3DSA:3.30.70.260 324 408 2.2E-29 T 21-04-2016 VFU_RS04010 14550d2676e1412eb947b37c7b5a2414 409 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 21-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VFU_RS04010 14550d2676e1412eb947b37c7b5a2414 409 SUPERFAMILY SSF55021 335 408 1.37E-17 T 21-04-2016 VFU_RS04010 14550d2676e1412eb947b37c7b5a2414 409 SUPERFAMILY SSF52283 7 136 3.4E-49 T 21-04-2016 VFU_RS04010 14550d2676e1412eb947b37c7b5a2414 409 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 9.0E-54 T 21-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VFU_RS04010 14550d2676e1412eb947b37c7b5a2414 409 PANTHER PTHR10996 1 369 2.2E-243 T 21-04-2016 VFU_RS04535 2cd8d38241d9c0245197d0317e1b55d2 395 SUPERFAMILY SSF55174 320 394 3.53E-15 T 21-04-2016 VFU_RS04535 2cd8d38241d9c0245197d0317e1b55d2 395 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 394 48.291 T 21-04-2016 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 VFU_RS04535 2cd8d38241d9c0245197d0317e1b55d2 395 PANTHER PTHR11766 4 395 2.8E-237 T 21-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 VFU_RS04535 2cd8d38241d9c0245197d0317e1b55d2 395 Gene3D G3DSA:3.10.290.10 327 394 2.5E-23 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VFU_RS04535 2cd8d38241d9c0245197d0317e1b55d2 395 Gene3D G3DSA:1.10.240.10 228 326 1.9E-37 T 21-04-2016 VFU_RS04535 2cd8d38241d9c0245197d0317e1b55d2 395 SUPERFAMILY SSF52374 6 315 7.84E-97 T 21-04-2016 VFU_RS04535 2cd8d38241d9c0245197d0317e1b55d2 395 Pfam PF00579 tRNA synthetases class I (W and Y) 30 317 2.3E-79 T 21-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VFU_RS04535 2cd8d38241d9c0245197d0317e1b55d2 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 1.5E-25 T 21-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 VFU_RS04535 2cd8d38241d9c0245197d0317e1b55d2 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 1.5E-25 T 21-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 VFU_RS04535 2cd8d38241d9c0245197d0317e1b55d2 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 1.5E-25 T 21-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 VFU_RS04535 2cd8d38241d9c0245197d0317e1b55d2 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 1.5E-25 T 21-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 VFU_RS04535 2cd8d38241d9c0245197d0317e1b55d2 395 PANTHER PTHR11766:SF1 4 395 2.8E-237 T 21-04-2016 VFU_RS04535 2cd8d38241d9c0245197d0317e1b55d2 395 Gene3D G3DSA:3.40.50.620 11 227 3.8E-83 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VFU_RS04535 2cd8d38241d9c0245197d0317e1b55d2 395 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 4 395 4.7E-128 T 21-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 VFU_RS04535 2cd8d38241d9c0245197d0317e1b55d2 395 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 21-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VFU_RS03440 8fdcc020923e065c0b22b9c480ad7cc1 460 Pfam PF03880 DbpA RNA binding domain 387 457 3.9E-22 T 21-04-2016 IPR005580 DbpA, RNA-binding domain VFU_RS03440 8fdcc020923e065c0b22b9c480ad7cc1 460 PANTHER PTHR24031:SF180 1 438 2.1E-263 T 21-04-2016 VFU_RS03440 8fdcc020923e065c0b22b9c480ad7cc1 460 Pfam PF00271 Helicase conserved C-terminal domain 232 338 3.2E-27 T 21-04-2016 IPR001650 Helicase, C-terminal VFU_RS03440 8fdcc020923e065c0b22b9c480ad7cc1 460 Pfam PF00270 DEAD/DEAH box helicase 28 194 1.8E-47 T 21-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VFU_RS03440 8fdcc020923e065c0b22b9c480ad7cc1 460 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 21-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VFU_RS03440 8fdcc020923e065c0b22b9c480ad7cc1 460 PANTHER PTHR24031 1 438 2.1E-263 T 21-04-2016 VFU_RS03440 8fdcc020923e065c0b22b9c480ad7cc1 460 Gene3D G3DSA:3.40.50.300 4 208 3.3E-77 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS03440 8fdcc020923e065c0b22b9c480ad7cc1 460 Gene3D G3DSA:3.40.50.300 209 370 1.1E-48 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS03440 8fdcc020923e065c0b22b9c480ad7cc1 460 SUPERFAMILY SSF52540 73 359 9.22E-72 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS03440 8fdcc020923e065c0b22b9c480ad7cc1 460 SMART SM00487 23 220 7.7E-56 T 21-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VFU_RS03440 8fdcc020923e065c0b22b9c480ad7cc1 460 SMART SM00490 257 338 1.8E-29 T 21-04-2016 IPR001650 Helicase, C-terminal VFU_RS04320 5232ea76e92eb1510b2fd51b856de761 886 Gene3D G3DSA:3.40.50.970 55 469 7.0E-153 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold VFU_RS04320 5232ea76e92eb1510b2fd51b856de761 886 SUPERFAMILY SSF52922 701 885 5.97E-58 T 21-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 VFU_RS04320 5232ea76e92eb1510b2fd51b856de761 886 PANTHER PTHR11624 480 535 0.0 T 21-04-2016 IPR033247 Transketolase family VFU_RS04320 5232ea76e92eb1510b2fd51b856de761 886 PANTHER PTHR11624 553 767 0.0 T 21-04-2016 IPR033247 Transketolase family VFU_RS04320 5232ea76e92eb1510b2fd51b856de761 886 PANTHER PTHR11624 361 450 0.0 T 21-04-2016 IPR033247 Transketolase family VFU_RS04320 5232ea76e92eb1510b2fd51b856de761 886 PANTHER PTHR11624 73 292 0.0 T 21-04-2016 IPR033247 Transketolase family VFU_RS04320 5232ea76e92eb1510b2fd51b856de761 886 PANTHER PTHR11624 786 868 0.0 T 21-04-2016 IPR033247 Transketolase family VFU_RS04320 5232ea76e92eb1510b2fd51b856de761 886 Gene3D G3DSA:3.40.50.920 706 885 7.4E-74 T 21-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 VFU_RS04320 5232ea76e92eb1510b2fd51b856de761 886 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 104 298 1.8E-9 T 21-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 VFU_RS04320 5232ea76e92eb1510b2fd51b856de761 886 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 360 426 5.7E-5 T 21-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 VFU_RS04320 5232ea76e92eb1510b2fd51b856de761 886 PIRSF PIRSF000156 1 886 0.0 T 21-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 VFU_RS04320 5232ea76e92eb1510b2fd51b856de761 886 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 4 885 0.0 T 21-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 VFU_RS04320 5232ea76e92eb1510b2fd51b856de761 886 PANTHER PTHR11624:SF67 480 535 0.0 T 21-04-2016 VFU_RS04320 5232ea76e92eb1510b2fd51b856de761 886 PANTHER PTHR11624:SF67 553 767 0.0 T 21-04-2016 VFU_RS04320 5232ea76e92eb1510b2fd51b856de761 886 PANTHER PTHR11624:SF67 361 450 0.0 T 21-04-2016 VFU_RS04320 5232ea76e92eb1510b2fd51b856de761 886 PANTHER PTHR11624:SF67 73 292 0.0 T 21-04-2016 VFU_RS04320 5232ea76e92eb1510b2fd51b856de761 886 PANTHER PTHR11624:SF67 786 868 0.0 T 21-04-2016 VFU_RS04320 5232ea76e92eb1510b2fd51b856de761 886 SUPERFAMILY SSF52518 475 700 1.65E-97 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold VFU_RS04320 5232ea76e92eb1510b2fd51b856de761 886 Gene3D G3DSA:3.40.50.970 473 704 2.1E-120 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold VFU_RS04320 5232ea76e92eb1510b2fd51b856de761 886 SUPERFAMILY SSF52518 56 469 6.95E-139 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold VFU_RS14280 73cdc287809cd4d3e39c521ac36ba38a 601 PANTHER PTHR38038 1 598 6.4E-187 T 21-04-2016 VFU_RS14280 73cdc287809cd4d3e39c521ac36ba38a 601 Pfam PF04348 LppC putative lipoprotein 40 599 2.6E-192 T 21-04-2016 IPR007443 Penicillin-binding protein activator LpoA VFU_RS14280 73cdc287809cd4d3e39c521ac36ba38a 601 PANTHER PTHR38038:SF1 1 598 6.4E-187 T 21-04-2016 VFU_RS14280 73cdc287809cd4d3e39c521ac36ba38a 601 Gene3D G3DSA:3.40.50.2300 367 530 8.3E-50 T 21-04-2016 VFU_RS14280 73cdc287809cd4d3e39c521ac36ba38a 601 Gene3D G3DSA:3.40.50.2300 256 366 7.1E-54 T 21-04-2016 VFU_RS14280 73cdc287809cd4d3e39c521ac36ba38a 601 Gene3D G3DSA:3.40.50.2300 531 594 7.1E-54 T 21-04-2016 VFU_RS14280 73cdc287809cd4d3e39c521ac36ba38a 601 SUPERFAMILY SSF53822 454 598 5.1E-70 T 21-04-2016 IPR028082 Periplasmic binding protein-like I VFU_RS14280 73cdc287809cd4d3e39c521ac36ba38a 601 SUPERFAMILY SSF53822 260 426 5.1E-70 T 21-04-2016 IPR028082 Periplasmic binding protein-like I VFU_RS14280 73cdc287809cd4d3e39c521ac36ba38a 601 Hamap MF_01890 Penicillin-binding protein activator LpoA [lpoA]. 1 601 29.1 T 21-04-2016 IPR007443 Penicillin-binding protein activator LpoA VFU_RS09595 4cff3dc1af5e624e803dc46ec130fed5 272 SMART SM00346 11 101 1.1E-24 T 21-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 VFU_RS09595 4cff3dc1af5e624e803dc46ec130fed5 272 Gene3D G3DSA:3.30.450.40 80 253 9.9E-26 T 21-04-2016 IPR029016 GAF domain-like VFU_RS09595 4cff3dc1af5e624e803dc46ec130fed5 272 PANTHER PTHR30136:SF10 3 272 2.6E-84 T 21-04-2016 VFU_RS09595 4cff3dc1af5e624e803dc46ec130fed5 272 SUPERFAMILY SSF46785 12 82 7.27E-12 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS09595 4cff3dc1af5e624e803dc46ec130fed5 272 Pfam PF09339 IclR helix-turn-helix domain 14 62 1.6E-12 T 21-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 VFU_RS09595 4cff3dc1af5e624e803dc46ec130fed5 272 Gene3D G3DSA:1.10.10.10 5 79 1.0E-18 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS09595 4cff3dc1af5e624e803dc46ec130fed5 272 PANTHER PTHR30136 3 272 2.6E-84 T 21-04-2016 VFU_RS09595 4cff3dc1af5e624e803dc46ec130fed5 272 Pfam PF01614 Bacterial transcriptional regulator 134 256 1.6E-14 T 21-04-2016 IPR014757 Transcription regulator IclR, C-terminal VFU_RS09595 4cff3dc1af5e624e803dc46ec130fed5 272 SUPERFAMILY SSF55781 84 256 1.28E-24 T 21-04-2016 IPR029016 GAF domain-like VFU_RS02080 7668fa6ab51872de1ed2521d0842910e 249 TIGRFAM TIGR00760 araD: L-ribulose-5-phosphate 4-epimerase 17 243 2.4E-118 T 21-04-2016 IPR004661 L-ribulose-5-phosphate 4-epimerase GO:0008270|GO:0008742|GO:0019572 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 VFU_RS02080 7668fa6ab51872de1ed2521d0842910e 249 PANTHER PTHR22789:SF8 9 243 1.3E-133 T 21-04-2016 VFU_RS02080 7668fa6ab51872de1ed2521d0842910e 249 PANTHER PTHR22789 9 243 1.3E-133 T 21-04-2016 VFU_RS02080 7668fa6ab51872de1ed2521d0842910e 249 SUPERFAMILY SSF53639 17 235 3.34E-68 T 21-04-2016 IPR001303 Class II aldolase/adducin N-terminal VFU_RS02080 7668fa6ab51872de1ed2521d0842910e 249 SMART SM01007 22 210 2.0E-62 T 21-04-2016 IPR001303 Class II aldolase/adducin N-terminal VFU_RS02080 7668fa6ab51872de1ed2521d0842910e 249 Gene3D G3DSA:3.40.225.10 18 243 5.8E-70 T 21-04-2016 IPR001303 Class II aldolase/adducin N-terminal VFU_RS02080 7668fa6ab51872de1ed2521d0842910e 249 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 23 209 3.7E-44 T 21-04-2016 IPR001303 Class II aldolase/adducin N-terminal VFU_RS13240 c1bb8b7752763ec41d3e1e3795ea5edd 636 Pfam PF00012 Hsp70 protein 4 601 4.2E-264 T 21-04-2016 IPR013126 Heat shock protein 70 family VFU_RS13240 c1bb8b7752763ec41d3e1e3795ea5edd 636 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 4.8E-288 T 21-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 VFU_RS13240 c1bb8b7752763ec41d3e1e3795ea5edd 636 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 631 36.332 T 21-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 VFU_RS13240 c1bb8b7752763ec41d3e1e3795ea5edd 636 Gene3D G3DSA:3.90.640.10 229 314 1.3E-31 T 21-04-2016 VFU_RS13240 c1bb8b7752763ec41d3e1e3795ea5edd 636 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 21-04-2016 IPR018181 Heat shock protein 70, conserved site VFU_RS13240 c1bb8b7752763ec41d3e1e3795ea5edd 636 Gene3D G3DSA:3.30.420.40 195 228 5.4E-32 T 21-04-2016 VFU_RS13240 c1bb8b7752763ec41d3e1e3795ea5edd 636 Gene3D G3DSA:3.30.420.40 318 359 5.4E-32 T 21-04-2016 VFU_RS13240 c1bb8b7752763ec41d3e1e3795ea5edd 636 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 21-04-2016 IPR018181 Heat shock protein 70, conserved site VFU_RS13240 c1bb8b7752763ec41d3e1e3795ea5edd 636 Gene3D G3DSA:3.30.420.40 4 52 5.0E-65 T 21-04-2016 VFU_RS13240 c1bb8b7752763ec41d3e1e3795ea5edd 636 Gene3D G3DSA:3.30.420.40 118 194 5.0E-65 T 21-04-2016 VFU_RS13240 c1bb8b7752763ec41d3e1e3795ea5edd 636 PANTHER PTHR19375:SF173 2 635 0.0 T 21-04-2016 VFU_RS13240 c1bb8b7752763ec41d3e1e3795ea5edd 636 Gene3D G3DSA:3.30.30.30 53 106 1.8E-28 T 21-04-2016 VFU_RS13240 c1bb8b7752763ec41d3e1e3795ea5edd 636 SUPERFAMILY SSF100920 383 539 3.53E-60 T 21-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain VFU_RS13240 c1bb8b7752763ec41d3e1e3795ea5edd 636 PRINTS PR00301 70kDa heat shock protein signature 3 16 6.3E-80 T 21-04-2016 IPR013126 Heat shock protein 70 family VFU_RS13240 c1bb8b7752763ec41d3e1e3795ea5edd 636 PRINTS PR00301 70kDa heat shock protein signature 468 484 6.3E-80 T 21-04-2016 IPR013126 Heat shock protein 70 family VFU_RS13240 c1bb8b7752763ec41d3e1e3795ea5edd 636 PRINTS PR00301 70kDa heat shock protein signature 387 406 6.3E-80 T 21-04-2016 IPR013126 Heat shock protein 70 family VFU_RS13240 c1bb8b7752763ec41d3e1e3795ea5edd 636 PRINTS PR00301 70kDa heat shock protein signature 197 207 6.3E-80 T 21-04-2016 IPR013126 Heat shock protein 70 family VFU_RS13240 c1bb8b7752763ec41d3e1e3795ea5edd 636 PRINTS PR00301 70kDa heat shock protein signature 364 384 6.3E-80 T 21-04-2016 IPR013126 Heat shock protein 70 family VFU_RS13240 c1bb8b7752763ec41d3e1e3795ea5edd 636 PRINTS PR00301 70kDa heat shock protein signature 137 157 6.3E-80 T 21-04-2016 IPR013126 Heat shock protein 70 family VFU_RS13240 c1bb8b7752763ec41d3e1e3795ea5edd 636 PRINTS PR00301 70kDa heat shock protein signature 333 349 6.3E-80 T 21-04-2016 IPR013126 Heat shock protein 70 family VFU_RS13240 c1bb8b7752763ec41d3e1e3795ea5edd 636 PRINTS PR00301 70kDa heat shock protein signature 53 61 6.3E-80 T 21-04-2016 IPR013126 Heat shock protein 70 family VFU_RS13240 c1bb8b7752763ec41d3e1e3795ea5edd 636 PRINTS PR00301 70kDa heat shock protein signature 31 43 6.3E-80 T 21-04-2016 IPR013126 Heat shock protein 70 family VFU_RS13240 c1bb8b7752763ec41d3e1e3795ea5edd 636 PANTHER PTHR19375 2 635 0.0 T 21-04-2016 VFU_RS13240 c1bb8b7752763ec41d3e1e3795ea5edd 636 SUPERFAMILY SSF100934 534 607 9.42E-6 T 21-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain VFU_RS13240 c1bb8b7752763ec41d3e1e3795ea5edd 636 Gene3D G3DSA:1.20.1270.10 531 600 1.3E-25 T 21-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain VFU_RS13240 c1bb8b7752763ec41d3e1e3795ea5edd 636 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 336 350 - T 21-04-2016 IPR018181 Heat shock protein 70, conserved site VFU_RS13240 c1bb8b7752763ec41d3e1e3795ea5edd 636 SUPERFAMILY SSF53067 186 381 7.13E-66 T 21-04-2016 VFU_RS13240 c1bb8b7752763ec41d3e1e3795ea5edd 636 SUPERFAMILY SSF53067 1 182 2.09E-66 T 21-04-2016 VFU_RS13240 c1bb8b7752763ec41d3e1e3795ea5edd 636 Gene3D G3DSA:2.60.34.10 389 530 7.6E-72 T 21-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain VFU_RS08395 33336175a7b459ca4675eb0eb100c214 478 PANTHER PTHR10366 3 241 5.8E-109 T 21-04-2016 VFU_RS08395 33336175a7b459ca4675eb0eb100c214 478 PANTHER PTHR10366 259 318 5.8E-109 T 21-04-2016 VFU_RS08395 33336175a7b459ca4675eb0eb100c214 478 PANTHER PTHR10366:SF401 3 241 5.8E-109 T 21-04-2016 VFU_RS08395 33336175a7b459ca4675eb0eb100c214 478 PANTHER PTHR10366:SF401 259 318 5.8E-109 T 21-04-2016 VFU_RS08395 33336175a7b459ca4675eb0eb100c214 478 Pfam PF11066 Protein of unknown function (DUF2867) 333 465 4.3E-15 T 21-04-2016 IPR021295 Protein of unknown function DUF2867 VFU_RS08395 33336175a7b459ca4675eb0eb100c214 478 Gene3D G3DSA:3.40.50.720 1 222 8.4E-29 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS08395 33336175a7b459ca4675eb0eb100c214 478 Pfam PF13460 NAD(P)H-binding 8 150 1.0E-12 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS08395 33336175a7b459ca4675eb0eb100c214 478 SUPERFAMILY SSF51735 1 294 5.53E-41 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS13040 a9a53685f173c9b731813bf756ac2f56 258 Gene3D G3DSA:3.40.50.1010 4 179 1.7E-46 T 21-04-2016 IPR029060 PIN domain-like VFU_RS13040 a9a53685f173c9b731813bf756ac2f56 258 SMART SM00475 3 254 1.1E-58 T 21-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 VFU_RS13040 a9a53685f173c9b731813bf756ac2f56 258 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 155 1.8E-30 T 21-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 VFU_RS13040 a9a53685f173c9b731813bf756ac2f56 258 PANTHER PTHR10133:SF39 1 258 1.8E-156 T 21-04-2016 VFU_RS13040 a9a53685f173c9b731813bf756ac2f56 258 SUPERFAMILY SSF88723 4 164 7.06E-37 T 21-04-2016 IPR029060 PIN domain-like VFU_RS13040 a9a53685f173c9b731813bf756ac2f56 258 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 165 254 3.2E-22 T 21-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 VFU_RS13040 a9a53685f173c9b731813bf756ac2f56 258 Hamap MF_01192 Flap endonuclease Xni [xni]. 2 255 45.734 T 21-04-2016 IPR022895 Flap endonuclease Xni GO:0048256 VFU_RS13040 a9a53685f173c9b731813bf756ac2f56 258 Gene3D G3DSA:1.10.150.20 180 238 4.7E-18 T 21-04-2016 VFU_RS13040 a9a53685f173c9b731813bf756ac2f56 258 SUPERFAMILY SSF47807 164 254 4.78E-20 T 21-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 VFU_RS13040 a9a53685f173c9b731813bf756ac2f56 258 SMART SM00279 167 202 8.2E-10 T 21-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 VFU_RS13040 a9a53685f173c9b731813bf756ac2f56 258 PANTHER PTHR10133 1 258 1.8E-156 T 21-04-2016 VFU_RS06745 18e6191bcde5276de9d8b84ff920cd5f 120 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 118 1.1E-31 T 21-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 VFU_RS06745 18e6191bcde5276de9d8b84ff920cd5f 120 PIRSF PIRSF002889 1 120 1.5E-31 T 21-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 VFU_RS06745 18e6191bcde5276de9d8b84ff920cd5f 120 Pfam PF00460 Flagella basal body rod protein 11 38 2.7E-7 T 21-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VFU_RS06745 18e6191bcde5276de9d8b84ff920cd5f 120 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 21-04-2016 IPR019776 Flagellar basal body rod protein, conserved site VFU_RS06745 18e6191bcde5276de9d8b84ff920cd5f 120 PANTHER PTHR30435:SF12 2 120 1.2E-35 T 21-04-2016 VFU_RS06745 18e6191bcde5276de9d8b84ff920cd5f 120 PANTHER PTHR30435 2 120 1.2E-35 T 21-04-2016 VFU_RS08595 b551e1cb52ab108b2961d7daaa7bb358 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 423 3.0E-100 T 21-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VFU_RS08595 b551e1cb52ab108b2961d7daaa7bb358 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 422 2.0E-104 T 21-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 VFU_RS08595 b551e1cb52ab108b2961d7daaa7bb358 427 PANTHER PTHR33362 1 422 7.1E-243 T 21-04-2016 VFU_RS08595 b551e1cb52ab108b2961d7daaa7bb358 427 PANTHER PTHR33362:SF7 1 422 7.1E-243 T 21-04-2016 VFU_RS08595 b551e1cb52ab108b2961d7daaa7bb358 427 PIRSF PIRSF006066 1 426 5.0E-73 T 21-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 VFU_RS10950 449cea5736a5323954298276493e7c6c 233 SMART SM00858 110 171 2.6E-8 T 21-04-2016 IPR013974 SAF domain VFU_RS10950 449cea5736a5323954298276493e7c6c 233 Pfam PF13144 Chaperone for flagella basal body P-ring formation 53 231 5.1E-32 T 21-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal VFU_RS10950 449cea5736a5323954298276493e7c6c 233 PANTHER PTHR36307 95 231 1.9E-19 T 21-04-2016 VFU_RS10950 449cea5736a5323954298276493e7c6c 233 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 98 231 3.7E-28 T 21-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal VFU_RS08300 d6f6f55c69f806c54bc4faab500c0af0 356 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 11 127 9.6E-12 T 21-04-2016 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 VFU_RS08300 d6f6f55c69f806c54bc4faab500c0af0 356 Gene3D G3DSA:3.40.50.720 8 150 1.5E-18 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS08300 d6f6f55c69f806c54bc4faab500c0af0 356 SUPERFAMILY SSF51735 7 145 2.8E-16 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS08300 d6f6f55c69f806c54bc4faab500c0af0 356 PANTHER PTHR12286:SF4 1 351 3.2E-52 T 21-04-2016 VFU_RS08300 d6f6f55c69f806c54bc4faab500c0af0 356 PANTHER PTHR12286 1 351 3.2E-52 T 21-04-2016 VFU_RS01550 98d25324ea26e00acfe3c92ecb2bc74f 318 SUPERFAMILY SSF46785 7 88 3.39E-19 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS01550 98d25324ea26e00acfe3c92ecb2bc74f 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 2.2E-17 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS01550 98d25324ea26e00acfe3c92ecb2bc74f 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 2.8E-8 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS01550 98d25324ea26e00acfe3c92ecb2bc74f 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 2.8E-8 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS01550 98d25324ea26e00acfe3c92ecb2bc74f 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 2.8E-8 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS01550 98d25324ea26e00acfe3c92ecb2bc74f 318 SUPERFAMILY SSF53850 92 298 1.32E-39 T 21-04-2016 VFU_RS01550 98d25324ea26e00acfe3c92ecb2bc74f 318 PANTHER PTHR30118 2 308 1.5E-73 T 21-04-2016 VFU_RS01550 98d25324ea26e00acfe3c92ecb2bc74f 318 Gene3D G3DSA:1.10.10.10 5 89 3.9E-27 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS01550 98d25324ea26e00acfe3c92ecb2bc74f 318 PANTHER PTHR30118:SF8 2 308 1.5E-73 T 21-04-2016 VFU_RS01550 98d25324ea26e00acfe3c92ecb2bc74f 318 Gene3D G3DSA:3.40.190.10 175 269 2.4E-21 T 21-04-2016 VFU_RS01550 98d25324ea26e00acfe3c92ecb2bc74f 318 Gene3D G3DSA:3.40.190.10 92 174 1.4E-25 T 21-04-2016 VFU_RS01550 98d25324ea26e00acfe3c92ecb2bc74f 318 Gene3D G3DSA:3.40.190.10 274 302 1.4E-25 T 21-04-2016 VFU_RS01550 98d25324ea26e00acfe3c92ecb2bc74f 318 Pfam PF03466 LysR substrate binding domain 99 299 3.2E-24 T 21-04-2016 IPR005119 LysR, substrate-binding VFU_RS02500 0d36a8f8ed1deb5db309c2a254591a70 467 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 466 3.3E-243 T 21-04-2016 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 VFU_RS02500 0d36a8f8ed1deb5db309c2a254591a70 467 Gene3D G3DSA:1.10.10.60 400 466 3.1E-20 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS02500 0d36a8f8ed1deb5db309c2a254591a70 467 Gene3D G3DSA:3.40.50.2300 6 131 4.5E-35 T 21-04-2016 VFU_RS02500 0d36a8f8ed1deb5db309c2a254591a70 467 SUPERFAMILY SSF46689 382 466 4.3E-19 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS02500 0d36a8f8ed1deb5db309c2a254591a70 467 Pfam PF02954 Bacterial regulatory protein, Fis family 426 466 5.9E-16 T 21-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VFU_RS02500 0d36a8f8ed1deb5db309c2a254591a70 467 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 21-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VFU_RS02500 0d36a8f8ed1deb5db309c2a254591a70 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 449 4.4E-7 T 21-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VFU_RS02500 0d36a8f8ed1deb5db309c2a254591a70 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 467 4.4E-7 T 21-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VFU_RS02500 0d36a8f8ed1deb5db309c2a254591a70 467 Gene3D G3DSA:1.10.8.60 315 391 1.9E-21 T 21-04-2016 VFU_RS02500 0d36a8f8ed1deb5db309c2a254591a70 467 PANTHER PTHR32071 6 466 3.1E-242 T 21-04-2016 VFU_RS02500 0d36a8f8ed1deb5db309c2a254591a70 467 Gene3D G3DSA:3.40.50.300 140 314 5.6E-62 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS02500 0d36a8f8ed1deb5db309c2a254591a70 467 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 21-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VFU_RS02500 0d36a8f8ed1deb5db309c2a254591a70 467 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 166 179 - T 21-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VFU_RS02500 0d36a8f8ed1deb5db309c2a254591a70 467 SUPERFAMILY SSF52172 2 187 1.31E-42 T 21-04-2016 IPR011006 CheY-like superfamily VFU_RS02500 0d36a8f8ed1deb5db309c2a254591a70 467 SMART SM00448 4 115 2.0E-32 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS02500 0d36a8f8ed1deb5db309c2a254591a70 467 PANTHER PTHR32071:SF15 6 466 3.1E-242 T 21-04-2016 VFU_RS02500 0d36a8f8ed1deb5db309c2a254591a70 467 SUPERFAMILY SSF52540 141 385 4.8E-74 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS02500 0d36a8f8ed1deb5db309c2a254591a70 467 Pfam PF00072 Response regulator receiver domain 6 115 2.5E-28 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS02500 0d36a8f8ed1deb5db309c2a254591a70 467 Pfam PF00158 Sigma-54 interaction domain 142 309 1.3E-71 T 21-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VFU_RS02500 0d36a8f8ed1deb5db309c2a254591a70 467 SMART SM00382 162 324 6.3E-10 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS12910 d8970ba3937363e2fe5e5f1c45dac81e 200 PANTHER PTHR33545 1 198 7.3E-65 T 21-04-2016 VFU_RS12910 d8970ba3937363e2fe5e5f1c45dac81e 200 PANTHER PTHR33545:SF5 1 198 7.3E-65 T 21-04-2016 VFU_RS12910 d8970ba3937363e2fe5e5f1c45dac81e 200 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 11 186 2.5E-34 T 21-04-2016 IPR003740 Uncharacterised membrane protein YitT VFU_RS10215 0593c4106078f5b1c6ed55c864ac5a5f 367 SUPERFAMILY SSF52540 4 243 1.36E-85 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS10215 0593c4106078f5b1c6ed55c864ac5a5f 367 SUPERFAMILY SSF50331 236 359 1.53E-25 T 21-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal VFU_RS10215 0593c4106078f5b1c6ed55c864ac5a5f 367 Gene3D G3DSA:2.40.50.140 286 342 1.3E-9 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS10215 0593c4106078f5b1c6ed55c864ac5a5f 367 Gene3D G3DSA:3.40.50.300 4 234 2.3E-76 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS10215 0593c4106078f5b1c6ed55c864ac5a5f 367 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS10215 0593c4106078f5b1c6ed55c864ac5a5f 367 PANTHER PTHR24220:SF572 5 254 2.4E-163 T 21-04-2016 VFU_RS10215 0593c4106078f5b1c6ed55c864ac5a5f 367 PANTHER PTHR24220 5 254 2.4E-163 T 21-04-2016 VFU_RS10215 0593c4106078f5b1c6ed55c864ac5a5f 367 Gene3D G3DSA:2.40.50.100 239 285 6.4E-17 T 21-04-2016 VFU_RS10215 0593c4106078f5b1c6ed55c864ac5a5f 367 Gene3D G3DSA:2.40.50.100 345 358 6.4E-17 T 21-04-2016 VFU_RS10215 0593c4106078f5b1c6ed55c864ac5a5f 367 SMART SM00382 28 211 5.0E-14 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS10215 0593c4106078f5b1c6ed55c864ac5a5f 367 Pfam PF00005 ABC transporter 20 161 4.5E-33 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS10660 d0dba601f2f799f0a674a1d5e2cb700c 782 Gene3D G3DSA:3.40.50.300 191 326 2.3E-13 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS10660 d0dba601f2f799f0a674a1d5e2cb700c 782 SMART SM00847 372 461 0.0048 T 21-04-2016 IPR007502 Helicase-associated domain GO:0004386 VFU_RS10660 d0dba601f2f799f0a674a1d5e2cb700c 782 SUPERFAMILY SSF52540 18 325 1.84E-45 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS10660 d0dba601f2f799f0a674a1d5e2cb700c 782 SMART SM00490 219 315 1.2E-12 T 21-04-2016 IPR001650 Helicase, C-terminal VFU_RS10660 d0dba601f2f799f0a674a1d5e2cb700c 782 SMART SM00487 1 174 4.6E-15 T 21-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VFU_RS10660 d0dba601f2f799f0a674a1d5e2cb700c 782 Gene3D G3DSA:3.40.50.300 4 150 2.1E-38 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS10660 d0dba601f2f799f0a674a1d5e2cb700c 782 Pfam PF00271 Helicase conserved C-terminal domain 202 314 6.9E-12 T 21-04-2016 IPR001650 Helicase, C-terminal VFU_RS10660 d0dba601f2f799f0a674a1d5e2cb700c 782 Pfam PF00270 DEAD/DEAH box helicase 15 149 4.3E-8 T 21-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VFU_RS10660 d0dba601f2f799f0a674a1d5e2cb700c 782 Pfam PF04408 Helicase associated domain (HA2) 373 431 4.6E-7 T 21-04-2016 IPR007502 Helicase-associated domain GO:0004386 VFU_RS10660 d0dba601f2f799f0a674a1d5e2cb700c 782 PANTHER PTHR18934 2 402 5.0E-98 T 21-04-2016 VFU_RS09880 428c217a911d0b201dbb5d950a2ce57a 488 SUPERFAMILY SSF47384 243 321 1.86E-10 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS09880 428c217a911d0b201dbb5d950a2ce57a 488 SMART SM00387 369 481 2.3E-7 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS09880 428c217a911d0b201dbb5d950a2ce57a 488 Pfam PF00512 His Kinase A (phospho-acceptor) domain 260 320 3.6E-8 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS09880 428c217a911d0b201dbb5d950a2ce57a 488 SUPERFAMILY SSF55874 329 479 1.01E-19 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS09880 428c217a911d0b201dbb5d950a2ce57a 488 Gene3D G3DSA:1.10.287.130 255 311 9.8E-10 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS09880 428c217a911d0b201dbb5d950a2ce57a 488 PANTHER PTHR24423:SF474 196 481 2.4E-26 T 21-04-2016 VFU_RS09880 428c217a911d0b201dbb5d950a2ce57a 488 PANTHER PTHR24423:SF474 5 15 2.4E-26 T 21-04-2016 VFU_RS09880 428c217a911d0b201dbb5d950a2ce57a 488 SMART SM00388 258 324 6.5E-6 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS09880 428c217a911d0b201dbb5d950a2ce57a 488 Gene3D G3DSA:3.30.565.10 312 481 1.3E-19 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS09880 428c217a911d0b201dbb5d950a2ce57a 488 Pfam PF14501 GHKL domain 373 468 3.1E-5 T 21-04-2016 IPR032834 Sensor histidine kinase NatK, C-terminal domain VFU_RS09880 428c217a911d0b201dbb5d950a2ce57a 488 PANTHER PTHR24423 196 481 2.4E-26 T 21-04-2016 VFU_RS09880 428c217a911d0b201dbb5d950a2ce57a 488 PANTHER PTHR24423 5 15 2.4E-26 T 21-04-2016 VFU_RS00165 9999aae02de2bb9feca8fb2f849a6f71 471 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 37 467 1.6E-81 T 21-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VFU_RS00165 9999aae02de2bb9feca8fb2f849a6f71 471 Pfam PF00939 Sodium:sulfate symporter transmembrane region 20 468 4.2E-49 T 21-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VFU_RS00165 9999aae02de2bb9feca8fb2f849a6f71 471 PANTHER PTHR10283 1 74 4.8E-144 T 21-04-2016 VFU_RS00165 9999aae02de2bb9feca8fb2f849a6f71 471 PANTHER PTHR10283 94 464 4.8E-144 T 21-04-2016 VFU_RS00165 9999aae02de2bb9feca8fb2f849a6f71 471 PANTHER PTHR10283:SF92 1 74 4.8E-144 T 21-04-2016 VFU_RS00165 9999aae02de2bb9feca8fb2f849a6f71 471 PANTHER PTHR10283:SF92 94 464 4.8E-144 T 21-04-2016 VFU_RS03040 a3caa00930ba53f13d36a6d655790ed0 344 PIRSF PIRSF000114 10 344 4.0E-97 T 21-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VFU_RS03040 a3caa00930ba53f13d36a6d655790ed0 344 Gene3D G3DSA:1.10.1040.10 192 338 9.9E-59 T 21-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VFU_RS03040 a3caa00930ba53f13d36a6d655790ed0 344 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 200 221 - T 21-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VFU_RS03040 a3caa00930ba53f13d36a6d655790ed0 344 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 14 334 37.24 T 21-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VFU_RS03040 a3caa00930ba53f13d36a6d655790ed0 344 SUPERFAMILY SSF48179 191 343 1.53E-56 T 21-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VFU_RS03040 a3caa00930ba53f13d36a6d655790ed0 344 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 16 171 9.5E-48 T 21-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VFU_RS03040 a3caa00930ba53f13d36a6d655790ed0 344 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 192 330 4.8E-52 T 21-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VFU_RS03040 a3caa00930ba53f13d36a6d655790ed0 344 Gene3D G3DSA:3.40.50.720 17 190 1.8E-53 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS03040 a3caa00930ba53f13d36a6d655790ed0 344 PANTHER PTHR11728 8 344 2.8E-139 T 21-04-2016 VFU_RS03040 a3caa00930ba53f13d36a6d655790ed0 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 185 209 2.5E-43 T 21-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VFU_RS03040 a3caa00930ba53f13d36a6d655790ed0 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 250 267 2.5E-43 T 21-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VFU_RS03040 a3caa00930ba53f13d36a6d655790ed0 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 68 95 2.5E-43 T 21-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VFU_RS03040 a3caa00930ba53f13d36a6d655790ed0 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 210 234 2.5E-43 T 21-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VFU_RS03040 a3caa00930ba53f13d36a6d655790ed0 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 18 35 2.5E-43 T 21-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VFU_RS03040 a3caa00930ba53f13d36a6d655790ed0 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 144 164 2.5E-43 T 21-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VFU_RS03040 a3caa00930ba53f13d36a6d655790ed0 344 SUPERFAMILY SSF51735 16 190 3.23E-49 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS06180 13617bd0fe8d26e7f34f3a8c9595c8b4 75 SUPERFAMILY SSF50037 4 74 3.89E-18 T 21-04-2016 IPR008988 Transcriptional repressor, C-terminal VFU_RS06180 13617bd0fe8d26e7f34f3a8c9595c8b4 75 SMART SM00899 1 74 2.0E-22 T 21-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 VFU_RS06180 13617bd0fe8d26e7f34f3a8c9595c8b4 75 PANTHER PTHR33238 1 75 3.3E-23 T 21-04-2016 VFU_RS06180 13617bd0fe8d26e7f34f3a8c9595c8b4 75 Pfam PF04023 FeoA domain 1 73 3.0E-18 T 21-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 VFU_RS11505 6b129a153627f6e3ef99c5fcdd849935 246 PANTHER PTHR30133:SF3 3 246 2.2E-166 T 21-04-2016 VFU_RS11505 6b129a153627f6e3ef99c5fcdd849935 246 Gene3D G3DSA:1.10.3720.10 110 241 3.9E-38 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS11505 6b129a153627f6e3ef99c5fcdd849935 246 Gene3D G3DSA:1.10.3720.10 8 78 3.9E-38 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS11505 6b129a153627f6e3ef99c5fcdd849935 246 SUPERFAMILY SSF161098 11 78 8.24E-38 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS11505 6b129a153627f6e3ef99c5fcdd849935 246 SUPERFAMILY SSF161098 110 233 8.24E-38 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS11505 6b129a153627f6e3ef99c5fcdd849935 246 PANTHER PTHR30133 3 246 2.2E-166 T 21-04-2016 VFU_RS11505 6b129a153627f6e3ef99c5fcdd849935 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 73 1.0E-15 T 21-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 VFU_RS11505 6b129a153627f6e3ef99c5fcdd849935 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 241 5.5E-21 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS02785 3100f55fff0912c6e687b413006471dc 309 Gene3D G3DSA:3.40.50.1370 7 144 1.2E-50 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VFU_RS02785 3100f55fff0912c6e687b413006471dc 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 1.2E-37 T 21-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VFU_RS02785 3100f55fff0912c6e687b413006471dc 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 1.2E-37 T 21-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VFU_RS02785 3100f55fff0912c6e687b413006471dc 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 1.2E-37 T 21-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VFU_RS02785 3100f55fff0912c6e687b413006471dc 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 1.2E-37 T 21-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VFU_RS02785 3100f55fff0912c6e687b413006471dc 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 1.2E-37 T 21-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VFU_RS02785 3100f55fff0912c6e687b413006471dc 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 1.2E-37 T 21-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VFU_RS02785 3100f55fff0912c6e687b413006471dc 309 PANTHER PTHR11405 1 305 4.8E-142 T 21-04-2016 VFU_RS02785 3100f55fff0912c6e687b413006471dc 309 SUPERFAMILY SSF53671 4 306 1.44E-101 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VFU_RS02785 3100f55fff0912c6e687b413006471dc 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 1.7E-26 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VFU_RS02785 3100f55fff0912c6e687b413006471dc 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 1.7E-26 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VFU_RS02785 3100f55fff0912c6e687b413006471dc 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 1.7E-26 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VFU_RS02785 3100f55fff0912c6e687b413006471dc 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 1.7E-26 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VFU_RS02785 3100f55fff0912c6e687b413006471dc 309 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VFU_RS02785 3100f55fff0912c6e687b413006471dc 309 PANTHER PTHR11405:SF16 1 305 4.8E-142 T 21-04-2016 VFU_RS02785 3100f55fff0912c6e687b413006471dc 309 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 1.2E-115 T 21-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VFU_RS02785 3100f55fff0912c6e687b413006471dc 309 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 2.4E-31 T 21-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 VFU_RS02785 3100f55fff0912c6e687b413006471dc 309 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 38.671 T 21-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VFU_RS02785 3100f55fff0912c6e687b413006471dc 309 Gene3D G3DSA:3.40.50.1370 145 292 1.4E-54 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VFU_RS02785 3100f55fff0912c6e687b413006471dc 309 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 4.9E-43 T 21-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 VFU_RS08960 fabec51a07dfd544f07cf6f3af97508c 189 Pfam PF09335 SNARE associated Golgi protein 23 143 8.5E-19 T 21-04-2016 IPR032816 SNARE associated Golgi protein VFU_RS08960 fabec51a07dfd544f07cf6f3af97508c 189 PANTHER PTHR30353:SF8 1 185 6.1E-61 T 21-04-2016 VFU_RS08960 fabec51a07dfd544f07cf6f3af97508c 189 PANTHER PTHR30353 1 185 6.1E-61 T 21-04-2016 IPR032818 DedA family VFU_RS12805 f1a0d884e427e1a6adf30eb8eb0cc242 383 PANTHER PTHR13789 3 383 3.5E-220 T 21-04-2016 VFU_RS12805 f1a0d884e427e1a6adf30eb8eb0cc242 383 Gene3D G3DSA:3.50.50.60 3 180 1.1E-43 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS12805 f1a0d884e427e1a6adf30eb8eb0cc242 383 Gene3D G3DSA:3.50.50.60 265 348 1.1E-43 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS12805 f1a0d884e427e1a6adf30eb8eb0cc242 383 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 292 308 2.7E-19 T 21-04-2016 VFU_RS12805 f1a0d884e427e1a6adf30eb8eb0cc242 383 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 2.7E-19 T 21-04-2016 VFU_RS12805 f1a0d884e427e1a6adf30eb8eb0cc242 383 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 277 292 2.7E-19 T 21-04-2016 VFU_RS12805 f1a0d884e427e1a6adf30eb8eb0cc242 383 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 2.7E-19 T 21-04-2016 VFU_RS12805 f1a0d884e427e1a6adf30eb8eb0cc242 383 PANTHER PTHR13789:SF233 3 383 3.5E-220 T 21-04-2016 VFU_RS12805 f1a0d884e427e1a6adf30eb8eb0cc242 383 Pfam PF01494 FAD binding domain 4 308 2.1E-26 T 21-04-2016 IPR002938 FAD-binding domain GO:0071949 VFU_RS12805 f1a0d884e427e1a6adf30eb8eb0cc242 383 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 382 6.0E-114 T 21-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 VFU_RS12805 f1a0d884e427e1a6adf30eb8eb0cc242 383 SUPERFAMILY SSF51905 264 376 1.14E-57 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS12805 f1a0d884e427e1a6adf30eb8eb0cc242 383 SUPERFAMILY SSF51905 3 175 1.14E-57 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS11775 68c66ab8bec7c4341741d1a1eac95186 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.2E-20 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VFU_RS11775 68c66ab8bec7c4341741d1a1eac95186 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.2E-20 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VFU_RS11775 68c66ab8bec7c4341741d1a1eac95186 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.2E-20 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VFU_RS11775 68c66ab8bec7c4341741d1a1eac95186 90 SMART SM00411 1 90 8.1E-44 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VFU_RS11775 68c66ab8bec7c4341741d1a1eac95186 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 21-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VFU_RS11775 68c66ab8bec7c4341741d1a1eac95186 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.4E-33 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VFU_RS11775 68c66ab8bec7c4341741d1a1eac95186 90 Gene3D G3DSA:4.10.520.10 1 90 8.9E-37 T 21-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 VFU_RS11775 68c66ab8bec7c4341741d1a1eac95186 90 SUPERFAMILY SSF47729 1 90 5.74E-32 T 21-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 VFU_RS11775 68c66ab8bec7c4341741d1a1eac95186 90 PANTHER PTHR33175 1 90 5.5E-45 T 21-04-2016 VFU_RS07020 787c8fd072a8e828646410cf6d410d1f 152 SUPERFAMILY SSF54909 63 152 1.34E-21 T 21-04-2016 IPR011008 Dimeric alpha-beta barrel VFU_RS07020 787c8fd072a8e828646410cf6d410d1f 152 SMART SM00344 3 112 1.6E-46 T 21-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VFU_RS07020 787c8fd072a8e828646410cf6d410d1f 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 1.7E-11 T 21-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VFU_RS07020 787c8fd072a8e828646410cf6d410d1f 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 1.7E-11 T 21-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VFU_RS07020 787c8fd072a8e828646410cf6d410d1f 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 1.7E-11 T 21-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VFU_RS07020 787c8fd072a8e828646410cf6d410d1f 152 Gene3D G3DSA:1.10.10.10 4 55 3.4E-21 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS07020 787c8fd072a8e828646410cf6d410d1f 152 SUPERFAMILY SSF46785 2 61 1.32E-15 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS07020 787c8fd072a8e828646410cf6d410d1f 152 PANTHER PTHR30154 1 152 2.7E-90 T 21-04-2016 VFU_RS07020 787c8fd072a8e828646410cf6d410d1f 152 Gene3D G3DSA:3.30.70.920 56 140 1.3E-29 T 21-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VFU_RS07020 787c8fd072a8e828646410cf6d410d1f 152 Pfam PF01037 Lrp/AsnC ligand binding domain 69 142 2.7E-22 T 21-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VFU_RS07020 787c8fd072a8e828646410cf6d410d1f 152 PANTHER PTHR30154:SF17 1 152 2.7E-90 T 21-04-2016 VFU_RS07020 787c8fd072a8e828646410cf6d410d1f 152 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 49 6.3E-17 T 21-04-2016 VFU_RS13135 5c7f326813523fcf76e01e123136c1b4 41 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 3.0E-8 T 21-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS13135 5c7f326813523fcf76e01e123136c1b4 41 PANTHER PTHR18804:SF11 1 40 1.2E-20 T 21-04-2016 VFU_RS13135 5c7f326813523fcf76e01e123136c1b4 41 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 16.444 T 21-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS13135 5c7f326813523fcf76e01e123136c1b4 41 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 21-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS13135 5c7f326813523fcf76e01e123136c1b4 41 Pfam PF00444 Ribosomal protein L36 1 40 4.7E-17 T 21-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS13135 5c7f326813523fcf76e01e123136c1b4 41 SUPERFAMILY SSF57840 1 40 9.55E-14 T 21-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS13135 5c7f326813523fcf76e01e123136c1b4 41 PANTHER PTHR18804 1 40 1.2E-20 T 21-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS02160 1e3f62e2febabba525051c327bf9a873 932 TIGRFAM TIGR00593 pola: DNA polymerase I 9 932 1.3E-285 T 21-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS02160 1e3f62e2febabba525051c327bf9a873 932 ProSitePatterns PS00447 DNA polymerase family A signature. 757 776 - T 21-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS02160 1e3f62e2febabba525051c327bf9a873 932 Gene3D G3DSA:3.30.420.10 332 545 2.9E-86 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VFU_RS02160 1e3f62e2febabba525051c327bf9a873 932 Gene3D G3DSA:1.20.1060.10 546 666 1.2E-36 T 21-04-2016 VFU_RS02160 1e3f62e2febabba525051c327bf9a873 932 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 2.8E-54 T 21-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 VFU_RS02160 1e3f62e2febabba525051c327bf9a873 932 SUPERFAMILY SSF53098 336 521 2.72E-55 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VFU_RS02160 1e3f62e2febabba525051c327bf9a873 932 Gene3D G3DSA:1.10.150.20 187 253 2.9E-25 T 21-04-2016 VFU_RS02160 1e3f62e2febabba525051c327bf9a873 932 SUPERFAMILY SSF47807 171 291 2.24E-29 T 21-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 VFU_RS02160 1e3f62e2febabba525051c327bf9a873 932 SMART SM00474 333 520 5.2E-43 T 21-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VFU_RS02160 1e3f62e2febabba525051c327bf9a873 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 703 726 1.5E-78 T 21-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS02160 1e3f62e2febabba525051c327bf9a873 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 733 746 1.5E-78 T 21-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS02160 1e3f62e2febabba525051c327bf9a873 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 879 892 1.5E-78 T 21-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS02160 1e3f62e2febabba525051c327bf9a873 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 757 782 1.5E-78 T 21-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS02160 1e3f62e2febabba525051c327bf9a873 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 848 864 1.5E-78 T 21-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS02160 1e3f62e2febabba525051c327bf9a873 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 681 696 1.5E-78 T 21-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS02160 1e3f62e2febabba525051c327bf9a873 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 658 680 1.5E-78 T 21-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS02160 1e3f62e2febabba525051c327bf9a873 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 794 805 1.5E-78 T 21-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS02160 1e3f62e2febabba525051c327bf9a873 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 816 827 1.5E-78 T 21-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS02160 1e3f62e2febabba525051c327bf9a873 932 SMART SM00279 173 208 1.2E-13 T 21-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 VFU_RS02160 1e3f62e2febabba525051c327bf9a873 932 Gene3D G3DSA:3.30.70.370 822 932 2.6E-66 T 21-04-2016 VFU_RS02160 1e3f62e2febabba525051c327bf9a873 932 Gene3D G3DSA:3.30.70.370 667 714 2.6E-66 T 21-04-2016 VFU_RS02160 1e3f62e2febabba525051c327bf9a873 932 Pfam PF00476 DNA polymerase family A 556 930 5.0E-157 T 21-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS02160 1e3f62e2febabba525051c327bf9a873 932 SMART SM00482 689 896 5.3E-119 T 21-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS02160 1e3f62e2febabba525051c327bf9a873 932 Pfam PF01612 3'-5' exonuclease 333 520 1.1E-40 T 21-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VFU_RS02160 1e3f62e2febabba525051c327bf9a873 932 SMART SM00475 7 268 1.8E-121 T 21-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 VFU_RS02160 1e3f62e2febabba525051c327bf9a873 932 PANTHER PTHR10133:SF27 6 288 0.0 T 21-04-2016 VFU_RS02160 1e3f62e2febabba525051c327bf9a873 932 PANTHER PTHR10133:SF27 319 931 0.0 T 21-04-2016 VFU_RS02160 1e3f62e2febabba525051c327bf9a873 932 SUPERFAMILY SSF88723 7 170 2.21E-56 T 21-04-2016 IPR029060 PIN domain-like VFU_RS02160 1e3f62e2febabba525051c327bf9a873 932 Gene3D G3DSA:3.40.50.1010 8 186 1.0E-73 T 21-04-2016 IPR029060 PIN domain-like VFU_RS02160 1e3f62e2febabba525051c327bf9a873 932 SUPERFAMILY SSF56672 525 932 4.23E-159 T 21-04-2016 VFU_RS02160 1e3f62e2febabba525051c327bf9a873 932 PANTHER PTHR10133 6 288 0.0 T 21-04-2016 VFU_RS02160 1e3f62e2febabba525051c327bf9a873 932 PANTHER PTHR10133 319 931 0.0 T 21-04-2016 VFU_RS02160 1e3f62e2febabba525051c327bf9a873 932 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 271 9.4E-28 T 21-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 VFU_RS02160 1e3f62e2febabba525051c327bf9a873 932 Gene3D G3DSA:1.10.150.20 715 821 1.0E-36 T 21-04-2016 VFU_RS04250 8348ec88d185bf36dfe97af1757f1579 65 Pfam PF03884 Domain of unknown function (DUF329) 8 58 5.2E-25 T 21-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 VFU_RS04250 8348ec88d185bf36dfe97af1757f1579 65 SUPERFAMILY SSF57716 5 63 5.42E-22 T 21-04-2016 VFU_RS04250 8348ec88d185bf36dfe97af1757f1579 65 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 4 60 18.658 T 21-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 VFU_RS04250 8348ec88d185bf36dfe97af1757f1579 65 Gene3D G3DSA:3.30.50.10 2 63 1.5E-26 T 21-04-2016 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 VFU_RS04250 8348ec88d185bf36dfe97af1757f1579 65 PANTHER PTHR36150:SF1 3 65 4.2E-26 T 21-04-2016 VFU_RS04250 8348ec88d185bf36dfe97af1757f1579 65 PANTHER PTHR36150 3 65 4.2E-26 T 21-04-2016 VFU_RS20480 6a8d672cb9dd4c7c3a38fa208df37a32 266 SUPERFAMILY SSF64005 34 258 1.44E-88 T 21-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 VFU_RS20480 6a8d672cb9dd4c7c3a38fa208df37a32 266 Pfam PF01255 Putative undecaprenyl diphosphate synthase 42 262 1.8E-81 T 21-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 VFU_RS20480 6a8d672cb9dd4c7c3a38fa208df37a32 266 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 35 262 3.1E-95 T 21-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 VFU_RS20480 6a8d672cb9dd4c7c3a38fa208df37a32 266 Gene3D G3DSA:3.40.1180.10 25 264 1.0E-99 T 21-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 VFU_RS20480 6a8d672cb9dd4c7c3a38fa208df37a32 266 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 208 225 - T 21-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 VFU_RS20480 6a8d672cb9dd4c7c3a38fa208df37a32 266 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 35 263 39.5 T 21-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 VFU_RS20480 6a8d672cb9dd4c7c3a38fa208df37a32 266 PANTHER PTHR10291 25 262 4.8E-125 T 21-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 VFU_RS09435 d486fee557e0d52f12eb4c5e00a5eb85 180 Hamap MF_00906 Cell division protein ZapC [zapC]. 1 177 37.553 T 21-04-2016 IPR009809 Cell division protein ZapC VFU_RS09435 d486fee557e0d52f12eb4c5e00a5eb85 180 PIRSF PIRSF010252 1 178 1.3E-69 T 21-04-2016 IPR009809 Cell division protein ZapC VFU_RS09435 d486fee557e0d52f12eb4c5e00a5eb85 180 Pfam PF07126 Cell-division protein ZapC 1 168 5.4E-67 T 21-04-2016 IPR009809 Cell division protein ZapC VFU_RS04695 23784760d7e6dfa003afb84b16f461f1 685 Pfam PF00990 Diguanylate cyclase, GGDEF domain 242 398 6.9E-46 T 21-04-2016 IPR000160 GGDEF domain VFU_RS04695 23784760d7e6dfa003afb84b16f461f1 685 PANTHER PTHR33121 362 682 1.8E-79 T 21-04-2016 VFU_RS04695 23784760d7e6dfa003afb84b16f461f1 685 PANTHER PTHR33121 59 70 1.8E-79 T 21-04-2016 VFU_RS04695 23784760d7e6dfa003afb84b16f461f1 685 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 238 401 1.2E-41 T 21-04-2016 IPR000160 GGDEF domain VFU_RS04695 23784760d7e6dfa003afb84b16f461f1 685 SUPERFAMILY SSF141868 418 672 5.1E-88 T 21-04-2016 IPR001633 EAL domain VFU_RS04695 23784760d7e6dfa003afb84b16f461f1 685 SMART SM00052 412 660 1.8E-103 T 21-04-2016 IPR001633 EAL domain VFU_RS04695 23784760d7e6dfa003afb84b16f461f1 685 PANTHER PTHR33121:SF13 362 682 1.8E-79 T 21-04-2016 VFU_RS04695 23784760d7e6dfa003afb84b16f461f1 685 PANTHER PTHR33121:SF13 59 70 1.8E-79 T 21-04-2016 VFU_RS04695 23784760d7e6dfa003afb84b16f461f1 685 Gene3D G3DSA:3.20.20.450 415 666 2.4E-93 T 21-04-2016 IPR001633 EAL domain VFU_RS04695 23784760d7e6dfa003afb84b16f461f1 685 SUPERFAMILY SSF55073 247 404 1.33E-48 T 21-04-2016 IPR029787 Nucleotide cyclase VFU_RS04695 23784760d7e6dfa003afb84b16f461f1 685 Pfam PF00563 EAL domain 420 655 3.9E-73 T 21-04-2016 IPR001633 EAL domain VFU_RS04695 23784760d7e6dfa003afb84b16f461f1 685 Gene3D G3DSA:3.30.70.270 243 410 9.6E-55 T 21-04-2016 VFU_RS04695 23784760d7e6dfa003afb84b16f461f1 685 SMART SM00267 231 402 6.8E-63 T 21-04-2016 IPR000160 GGDEF domain VFU_RS09960 4bbbbe3bea8db69d1ec6b20dbe05ccca 236 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 49 211 5.9E-36 T 21-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain VFU_RS09960 4bbbbe3bea8db69d1ec6b20dbe05ccca 236 PIRSF PIRSF005624 14 235 6.7E-98 T 21-04-2016 VFU_RS09960 4bbbbe3bea8db69d1ec6b20dbe05ccca 236 PANTHER PTHR30134:SF2 1 231 5.5E-132 T 21-04-2016 VFU_RS09960 4bbbbe3bea8db69d1ec6b20dbe05ccca 236 SUPERFAMILY SSF52540 20 231 3.25E-33 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS09960 4bbbbe3bea8db69d1ec6b20dbe05ccca 236 Gene3D G3DSA:3.40.50.300 55 137 2.0E-7 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS09960 4bbbbe3bea8db69d1ec6b20dbe05ccca 236 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 22 232 7.4E-92 T 21-04-2016 IPR004392 Hydrogenase accessory protein HypB GO:0006461|GO:0016151 VFU_RS09960 4bbbbe3bea8db69d1ec6b20dbe05ccca 236 PANTHER PTHR30134 1 231 5.5E-132 T 21-04-2016 VFU_RS03675 1c2e3b3c1ace3b660b60e8aaeebc9c9b 84 PIRSF PIRSF003113 1 83 1.4E-21 T 21-04-2016 IPR002634 BolA protein VFU_RS03675 1c2e3b3c1ace3b660b60e8aaeebc9c9b 84 PANTHER PTHR12735:SF24 1 84 5.6E-37 T 21-04-2016 VFU_RS03675 1c2e3b3c1ace3b660b60e8aaeebc9c9b 84 SUPERFAMILY SSF82657 4 82 3.14E-27 T 21-04-2016 IPR002634 BolA protein VFU_RS03675 1c2e3b3c1ace3b660b60e8aaeebc9c9b 84 PANTHER PTHR12735 1 84 5.6E-37 T 21-04-2016 VFU_RS03675 1c2e3b3c1ace3b660b60e8aaeebc9c9b 84 Gene3D G3DSA:3.30.300.90 3 80 1.6E-26 T 21-04-2016 IPR002634 BolA protein VFU_RS03675 1c2e3b3c1ace3b660b60e8aaeebc9c9b 84 Pfam PF01722 BolA-like protein 20 74 2.4E-13 T 21-04-2016 IPR002634 BolA protein VFU_RS01790 d6c4e42a7650dbde21319ed0040d77bb 513 SUPERFAMILY SSF47917 383 511 5.76E-45 T 21-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VFU_RS01790 d6c4e42a7650dbde21319ed0040d77bb 513 SUPERFAMILY SSF52540 96 381 2.16E-94 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS01790 d6c4e42a7650dbde21319ed0040d77bb 513 PANTHER PTHR15184 1 496 6.3E-290 T 21-04-2016 VFU_RS01790 d6c4e42a7650dbde21319ed0040d77bb 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 49.782 T 21-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VFU_RS01790 d6c4e42a7650dbde21319ed0040d77bb 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 21-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VFU_RS01790 d6c4e42a7650dbde21319ed0040d77bb 513 PANTHER PTHR15184:SF3 1 496 6.3E-290 T 21-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VFU_RS01790 d6c4e42a7650dbde21319ed0040d77bb 513 Gene3D G3DSA:1.20.150.20 383 510 7.2E-47 T 21-04-2016 VFU_RS01790 d6c4e42a7650dbde21319ed0040d77bb 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 1.5E-43 T 21-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VFU_RS01790 d6c4e42a7650dbde21319ed0040d77bb 513 Gene3D G3DSA:3.40.50.300 94 382 8.6E-113 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS01790 d6c4e42a7650dbde21319ed0040d77bb 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 1.3E-72 T 21-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VFU_RS01790 d6c4e42a7650dbde21319ed0040d77bb 513 Gene3D G3DSA:2.40.30.20 1 93 3.7E-30 T 21-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VFU_RS01790 d6c4e42a7650dbde21319ed0040d77bb 513 SUPERFAMILY SSF50615 10 94 3.73E-26 T 21-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VFU_RS01790 d6c4e42a7650dbde21319ed0040d77bb 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 92 2.1E-13 T 21-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VFU_RS01790 d6c4e42a7650dbde21319ed0040d77bb 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 7.4E-251 T 21-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VFU_RS08750 87af312d00684e252da4ad6f633cbd03 191 SUPERFAMILY SSF55729 14 184 6.71E-40 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase VFU_RS08750 87af312d00684e252da4ad6f633cbd03 191 PANTHER PTHR13256 16 191 7.4E-72 T 21-04-2016 VFU_RS08750 87af312d00684e252da4ad6f633cbd03 191 Pfam PF13302 Acetyltransferase (GNAT) domain 17 160 7.4E-21 T 21-04-2016 IPR000182 GNAT domain GO:0008080 VFU_RS08750 87af312d00684e252da4ad6f633cbd03 191 Gene3D G3DSA:3.40.630.30 15 185 1.9E-42 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase VFU_RS08750 87af312d00684e252da4ad6f633cbd03 191 PANTHER PTHR13256:SF24 16 191 7.4E-72 T 21-04-2016 VFU_RS04930 27e0e734a171b2a25bbd71ff0a2c1cf4 241 Gene3D G3DSA:1.25.40.10 32 161 3.3E-5 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VFU_RS04930 27e0e734a171b2a25bbd71ff0a2c1cf4 241 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 241 46.627 T 21-04-2016 IPR017689 Outer membrane protein assembly factor BamD VFU_RS04930 27e0e734a171b2a25bbd71ff0a2c1cf4 241 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 9 239 2.0E-79 T 21-04-2016 IPR017689 Outer membrane protein assembly factor BamD VFU_RS04930 27e0e734a171b2a25bbd71ff0a2c1cf4 241 SUPERFAMILY SSF48452 30 119 2.47E-8 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VFU_RS04930 27e0e734a171b2a25bbd71ff0a2c1cf4 241 PANTHER PTHR37423 1 240 4.8E-111 T 21-04-2016 VFU_RS04930 27e0e734a171b2a25bbd71ff0a2c1cf4 241 Pfam PF13525 Outer membrane lipoprotein 26 234 9.5E-80 T 21-04-2016 VFU_RS06305 b0a3e082da84e515a181dfa5448933b4 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 1.3E-95 T 21-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VFU_RS06305 b0a3e082da84e515a181dfa5448933b4 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 1.3E-95 T 21-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VFU_RS06305 b0a3e082da84e515a181dfa5448933b4 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 1.3E-95 T 21-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VFU_RS06305 b0a3e082da84e515a181dfa5448933b4 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 1.3E-95 T 21-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VFU_RS06305 b0a3e082da84e515a181dfa5448933b4 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 1.3E-95 T 21-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VFU_RS06305 b0a3e082da84e515a181dfa5448933b4 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 1.3E-95 T 21-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VFU_RS06305 b0a3e082da84e515a181dfa5448933b4 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 1.3E-95 T 21-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VFU_RS06305 b0a3e082da84e515a181dfa5448933b4 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 1.3E-95 T 21-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VFU_RS06305 b0a3e082da84e515a181dfa5448933b4 651 PANTHER PTHR30009:SF0 1 418 0.0 T 21-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VFU_RS06305 b0a3e082da84e515a181dfa5448933b4 651 PANTHER PTHR30009:SF0 470 651 0.0 T 21-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VFU_RS06305 b0a3e082da84e515a181dfa5448933b4 651 Pfam PF01578 Cytochrome C assembly protein 89 297 2.7E-54 T 21-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 VFU_RS06305 b0a3e082da84e515a181dfa5448933b4 651 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 639 1.9E-128 T 21-04-2016 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal VFU_RS06305 b0a3e082da84e515a181dfa5448933b4 651 PANTHER PTHR30009 1 418 0.0 T 21-04-2016 VFU_RS06305 b0a3e082da84e515a181dfa5448933b4 651 PANTHER PTHR30009 470 651 0.0 T 21-04-2016 VFU_RS06305 b0a3e082da84e515a181dfa5448933b4 651 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 642 2.0E-260 T 21-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VFU_RS06305 b0a3e082da84e515a181dfa5448933b4 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 2.2E-62 T 21-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VFU_RS06305 b0a3e082da84e515a181dfa5448933b4 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 2.2E-62 T 21-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VFU_RS06305 b0a3e082da84e515a181dfa5448933b4 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 2.2E-62 T 21-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VFU_RS06305 b0a3e082da84e515a181dfa5448933b4 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 2.2E-62 T 21-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VFU_RS06305 b0a3e082da84e515a181dfa5448933b4 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 632 645 2.2E-62 T 21-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VFU_RS06305 b0a3e082da84e515a181dfa5448933b4 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 2.2E-62 T 21-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VFU_RS06305 b0a3e082da84e515a181dfa5448933b4 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 2.2E-62 T 21-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VFU_RS07510 b2b18ea7c30f1a5f270ac382161e7edb 461 Gene3D G3DSA:3.40.50.980 147 293 2.3E-9 T 21-04-2016 VFU_RS07510 b2b18ea7c30f1a5f270ac382161e7edb 461 PANTHER PTHR24095 320 444 1.1E-14 T 21-04-2016 VFU_RS07510 b2b18ea7c30f1a5f270ac382161e7edb 461 Pfam PF13193 AMP-binding enzyme C-terminal domain 361 444 4.0E-7 T 21-04-2016 IPR025110 AMP-binding enzyme C-terminal domain VFU_RS07510 b2b18ea7c30f1a5f270ac382161e7edb 461 SUPERFAMILY SSF56801 19 456 5.89E-51 T 21-04-2016 VFU_RS07510 b2b18ea7c30f1a5f270ac382161e7edb 461 Gene3D G3DSA:3.40.50.980 21 146 3.8E-4 T 21-04-2016 VFU_RS07510 b2b18ea7c30f1a5f270ac382161e7edb 461 Pfam PF00501 AMP-binding enzyme 123 296 2.8E-10 T 21-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VFU_RS07510 b2b18ea7c30f1a5f270ac382161e7edb 461 PANTHER PTHR24095:SF43 320 444 1.1E-14 T 21-04-2016 VFU_RS07510 b2b18ea7c30f1a5f270ac382161e7edb 461 Gene3D G3DSA:3.30.300.30 350 454 7.4E-15 T 21-04-2016 VFU_RS03880 cd1971c61d08b10b8984fd0abb949ac2 432 Gene3D G3DSA:1.10.287.950 187 401 2.4E-51 T 21-04-2016 VFU_RS03880 cd1971c61d08b10b8984fd0abb949ac2 432 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 238 430 2.1E-42 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VFU_RS03880 cd1971c61d08b10b8984fd0abb949ac2 432 SUPERFAMILY SSF58104 124 430 5.23E-62 T 21-04-2016 VFU_RS03880 cd1971c61d08b10b8984fd0abb949ac2 432 SMART SM00283 170 431 7.1E-54 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VFU_RS03880 cd1971c61d08b10b8984fd0abb949ac2 432 PANTHER PTHR32089 85 430 6.7E-78 T 21-04-2016 VFU_RS11490 24c865e03229e228fff24c646b229add 705 SMART SM00283 443 704 3.8E-65 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VFU_RS11490 24c865e03229e228fff24c646b229add 705 PANTHER PTHR32089:SF34 22 705 1.0E-176 T 21-04-2016 VFU_RS11490 24c865e03229e228fff24c646b229add 705 Gene3D G3DSA:3.30.450.20 211 339 1.7E-8 T 21-04-2016 VFU_RS11490 24c865e03229e228fff24c646b229add 705 Gene3D G3DSA:1.10.287.950 458 674 1.6E-52 T 21-04-2016 VFU_RS11490 24c865e03229e228fff24c646b229add 705 Pfam PF02743 Cache domain 48 324 5.3E-18 T 21-04-2016 IPR033479 Double Cache domain 1 VFU_RS11490 24c865e03229e228fff24c646b229add 705 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 489 703 5.3E-48 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VFU_RS11490 24c865e03229e228fff24c646b229add 705 SMART SM00304 374 428 4.7E-14 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS11490 24c865e03229e228fff24c646b229add 705 SUPERFAMILY SSF58104 396 705 1.01E-72 T 21-04-2016 VFU_RS11490 24c865e03229e228fff24c646b229add 705 PANTHER PTHR32089 22 705 1.0E-176 T 21-04-2016 VFU_RS11490 24c865e03229e228fff24c646b229add 705 Pfam PF00672 HAMP domain 355 424 6.8E-14 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS10865 0912f8cfa0996eb2fd26fd35fdf188c1 98 PANTHER PTHR33606 1 98 2.6E-33 T 21-04-2016 VFU_RS10865 0912f8cfa0996eb2fd26fd35fdf188c1 98 Gene3D G3DSA:3.30.70.1060 1 98 1.5E-37 T 21-04-2016 VFU_RS10865 0912f8cfa0996eb2fd26fd35fdf188c1 98 Pfam PF03795 YCII-related domain 1 95 7.1E-29 T 21-04-2016 IPR005545 YCII-related VFU_RS10865 0912f8cfa0996eb2fd26fd35fdf188c1 98 SUPERFAMILY SSF54909 1 98 3.4E-32 T 21-04-2016 IPR011008 Dimeric alpha-beta barrel VFU_RS10395 ac8992a46650fd7f5fc673f5c7098da6 436 SUPERFAMILY SSF58104 232 434 4.45E-53 T 21-04-2016 VFU_RS10395 ac8992a46650fd7f5fc673f5c7098da6 436 SMART SM00086 96 138 1.3E-7 T 21-04-2016 IPR001610 PAC motif VFU_RS10395 ac8992a46650fd7f5fc673f5c7098da6 436 SMART SM00086 216 258 1.4E-5 T 21-04-2016 IPR001610 PAC motif VFU_RS10395 ac8992a46650fd7f5fc673f5c7098da6 436 Gene3D G3DSA:1.10.287.950 254 433 6.2E-46 T 21-04-2016 VFU_RS10395 ac8992a46650fd7f5fc673f5c7098da6 436 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 292 433 6.4E-39 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VFU_RS10395 ac8992a46650fd7f5fc673f5c7098da6 436 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 153 260 1.0E-15 T 21-04-2016 IPR000014 PAS domain VFU_RS10395 ac8992a46650fd7f5fc673f5c7098da6 436 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 34 139 7.6E-17 T 21-04-2016 IPR000014 PAS domain VFU_RS10395 ac8992a46650fd7f5fc673f5c7098da6 436 SMART SM00283 233 434 1.1E-22 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VFU_RS10395 ac8992a46650fd7f5fc673f5c7098da6 436 PANTHER PTHR24422:SF10 6 435 1.6E-172 T 21-04-2016 VFU_RS10395 ac8992a46650fd7f5fc673f5c7098da6 436 Gene3D G3DSA:3.30.450.20 157 253 6.3E-20 T 21-04-2016 VFU_RS10395 ac8992a46650fd7f5fc673f5c7098da6 436 Gene3D G3DSA:3.30.450.20 35 137 1.2E-24 T 21-04-2016 VFU_RS10395 ac8992a46650fd7f5fc673f5c7098da6 436 PANTHER PTHR24422 6 435 1.6E-172 T 21-04-2016 VFU_RS10395 ac8992a46650fd7f5fc673f5c7098da6 436 SUPERFAMILY SSF55785 35 135 4.71E-25 T 21-04-2016 IPR000014 PAS domain VFU_RS10395 ac8992a46650fd7f5fc673f5c7098da6 436 Pfam PF08447 PAS fold 168 251 4.6E-12 T 21-04-2016 IPR013655 PAS fold-3 GO:0005515 VFU_RS10395 ac8992a46650fd7f5fc673f5c7098da6 436 SUPERFAMILY SSF55785 156 256 7.68E-21 T 21-04-2016 IPR000014 PAS domain VFU_RS10395 ac8992a46650fd7f5fc673f5c7098da6 436 Pfam PF13426 PAS domain 40 137 1.9E-13 T 21-04-2016 IPR000014 PAS domain VFU_RS12590 df0cf2ef0bcbe6bd028c1f6c1589c5d1 441 PRINTS PR00173 Glutamate-aspartate symporter signature 374 393 1.5E-6 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VFU_RS12590 df0cf2ef0bcbe6bd028c1f6c1589c5d1 441 PRINTS PR00173 Glutamate-aspartate symporter signature 20 40 1.5E-6 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VFU_RS12590 df0cf2ef0bcbe6bd028c1f6c1589c5d1 441 PANTHER PTHR37821 1 441 2.4E-190 T 21-04-2016 VFU_RS12590 df0cf2ef0bcbe6bd028c1f6c1589c5d1 441 Pfam PF13726 Na+-H+ antiporter family 2 88 8.2E-36 T 21-04-2016 IPR032813 Putative Na+/H+ antiporter, N-terminal VFU_RS12590 df0cf2ef0bcbe6bd028c1f6c1589c5d1 441 Pfam PF03553 Na+/H+ antiporter family 150 435 2.6E-75 T 21-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VFU_RS05850 81a8505889a9e7ae09d3a6e4e6376376 620 PANTHER PTHR11911 148 268 4.1E-22 T 21-04-2016 VFU_RS05850 81a8505889a9e7ae09d3a6e4e6376376 620 Pfam PF00571 CBS domain 155 208 4.2E-8 T 21-04-2016 IPR000644 CBS domain VFU_RS05850 81a8505889a9e7ae09d3a6e4e6376376 620 Pfam PF00571 CBS domain 223 273 1.1E-5 T 21-04-2016 IPR000644 CBS domain VFU_RS05850 81a8505889a9e7ae09d3a6e4e6376376 620 Gene3D G3DSA:2.60.120.10 4 136 1.6E-7 T 21-04-2016 IPR014710 RmlC-like jelly roll fold VFU_RS05850 81a8505889a9e7ae09d3a6e4e6376376 620 SUPERFAMILY SSF54631 154 272 2.65E-25 T 21-04-2016 VFU_RS05850 81a8505889a9e7ae09d3a6e4e6376376 620 Pfam PF03445 Putative nucleotidyltransferase DUF294 303 435 5.6E-43 T 21-04-2016 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 VFU_RS05850 81a8505889a9e7ae09d3a6e4e6376376 620 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 474 618 5.2E-38 T 21-04-2016 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding VFU_RS05850 81a8505889a9e7ae09d3a6e4e6376376 620 Gene3D G3DSA:3.10.580.10 152 273 8.9E-28 T 21-04-2016 VFU_RS05850 81a8505889a9e7ae09d3a6e4e6376376 620 SUPERFAMILY SSF51206 4 134 2.23E-13 T 21-04-2016 IPR018490 Cyclic nucleotide-binding-like VFU_RS05850 81a8505889a9e7ae09d3a6e4e6376376 620 SMART SM00116 228 276 2.1 T 21-04-2016 IPR000644 CBS domain VFU_RS05850 81a8505889a9e7ae09d3a6e4e6376376 620 SMART SM00116 162 211 6.4E-8 T 21-04-2016 IPR000644 CBS domain VFU_RS07620 35e09a44a8c99973c42fb26adb2f9b29 264 PANTHER PTHR24220 3 251 3.3E-131 T 21-04-2016 VFU_RS07620 35e09a44a8c99973c42fb26adb2f9b29 264 Pfam PF00005 ABC transporter 22 177 2.8E-22 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS07620 35e09a44a8c99973c42fb26adb2f9b29 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS07620 35e09a44a8c99973c42fb26adb2f9b29 264 SUPERFAMILY SSF52540 2 230 1.09E-47 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS07620 35e09a44a8c99973c42fb26adb2f9b29 264 PANTHER PTHR24220:SF534 3 251 3.3E-131 T 21-04-2016 VFU_RS07620 35e09a44a8c99973c42fb26adb2f9b29 264 SMART SM00382 31 226 1.9E-7 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS07620 35e09a44a8c99973c42fb26adb2f9b29 264 Gene3D G3DSA:3.40.50.300 1 231 3.5E-53 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS09130 5dc8682036e40c2f37ba2a92d4db197d 195 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 5 190 29.358 T 21-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 VFU_RS09130 5dc8682036e40c2f37ba2a92d4db197d 195 PANTHER PTHR19136:SF81 1 190 2.7E-51 T 21-04-2016 VFU_RS09130 5dc8682036e40c2f37ba2a92d4db197d 195 PANTHER PTHR19136 1 190 2.7E-51 T 21-04-2016 VFU_RS09130 5dc8682036e40c2f37ba2a92d4db197d 195 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 8 188 1.6E-72 T 21-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 VFU_RS09130 5dc8682036e40c2f37ba2a92d4db197d 195 Gene3D G3DSA:3.90.550.10 6 192 4.5E-58 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VFU_RS09130 5dc8682036e40c2f37ba2a92d4db197d 195 Pfam PF12804 MobA-like NTP transferase domain 10 158 1.7E-36 T 21-04-2016 IPR025877 MobA-like NTP transferase VFU_RS09130 5dc8682036e40c2f37ba2a92d4db197d 195 SUPERFAMILY SSF53448 10 187 9.2E-36 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VFU_RS03090 d43f14e9880426720b4a5c0d809761c3 244 Gene3D G3DSA:3.40.30.10 3 163 1.0E-62 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS03090 d43f14e9880426720b4a5c0d809761c3 244 PRINTS PR00160 Glutaredoxin signature 228 241 1.4E-13 T 21-04-2016 IPR014025 Glutaredoxin subgroup VFU_RS03090 d43f14e9880426720b4a5c0d809761c3 244 PRINTS PR00160 Glutaredoxin signature 214 227 1.4E-13 T 21-04-2016 IPR014025 Glutaredoxin subgroup VFU_RS03090 d43f14e9880426720b4a5c0d809761c3 244 PRINTS PR00160 Glutaredoxin signature 173 191 1.4E-13 T 21-04-2016 IPR014025 Glutaredoxin subgroup VFU_RS03090 d43f14e9880426720b4a5c0d809761c3 244 SUPERFAMILY SSF52833 2 240 5.38E-45 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS03090 d43f14e9880426720b4a5c0d809761c3 244 Pfam PF00462 Glutaredoxin 173 231 1.2E-17 T 21-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VFU_RS03090 d43f14e9880426720b4a5c0d809761c3 244 PANTHER PTHR10430 1 168 4.3E-106 T 21-04-2016 VFU_RS03090 d43f14e9880426720b4a5c0d809761c3 244 Gene3D G3DSA:3.40.30.10 170 240 3.9E-24 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS03090 d43f14e9880426720b4a5c0d809761c3 244 Pfam PF08534 Redoxin 5 160 3.3E-31 T 21-04-2016 IPR013740 Redoxin GO:0016491 VFU_RS03090 d43f14e9880426720b4a5c0d809761c3 244 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 164 241 5.5E-40 T 21-04-2016 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 VFU_RS03090 d43f14e9880426720b4a5c0d809761c3 244 ProSitePatterns PS00195 Glutaredoxin active site. 175 191 - T 21-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 VFU_RS03090 d43f14e9880426720b4a5c0d809761c3 244 PANTHER PTHR10430:SF19 1 168 4.3E-106 T 21-04-2016 VFU_RS14370 77932e88fdd448ccc60c49a26d1afae6 184 Gene3D G3DSA:2.40.30.60 7 102 2.1E-33 T 21-04-2016 IPR002676 RimM protein GO:0006364 VFU_RS14370 77932e88fdd448ccc60c49a26d1afae6 184 Gene3D G3DSA:2.30.30.240 108 183 1.0E-28 T 21-04-2016 VFU_RS14370 77932e88fdd448ccc60c49a26d1afae6 184 PANTHER PTHR33692 9 184 3.2E-61 T 21-04-2016 VFU_RS14370 77932e88fdd448ccc60c49a26d1afae6 184 SUPERFAMILY SSF50447 15 102 2.15E-23 T 21-04-2016 IPR009000 Translation protein, beta-barrel domain VFU_RS14370 77932e88fdd448ccc60c49a26d1afae6 184 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 16 183 7.5E-56 T 21-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 VFU_RS14370 77932e88fdd448ccc60c49a26d1afae6 184 SUPERFAMILY SSF50346 108 182 2.55E-19 T 21-04-2016 IPR011033 PRC-barrel-like VFU_RS14370 77932e88fdd448ccc60c49a26d1afae6 184 Pfam PF01782 RimM N-terminal domain 17 97 2.1E-24 T 21-04-2016 IPR002676 RimM protein GO:0006364 VFU_RS14370 77932e88fdd448ccc60c49a26d1afae6 184 PANTHER PTHR33692:SF1 9 184 3.2E-61 T 21-04-2016 VFU_RS14370 77932e88fdd448ccc60c49a26d1afae6 184 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 15 184 23.236 T 21-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 VFU_RS14370 77932e88fdd448ccc60c49a26d1afae6 184 Pfam PF05239 PRC-barrel domain 105 179 4.3E-12 T 21-04-2016 IPR027275 PRC-barrel domain VFU_RS04285 ce95500657616d28802c413f7d1ba22a 295 SUPERFAMILY SSF54675 15 128 1.84E-32 T 21-04-2016 VFU_RS04285 ce95500657616d28802c413f7d1ba22a 295 Gene3D G3DSA:3.20.20.70 150 283 3.7E-59 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS04285 ce95500657616d28802c413f7d1ba22a 295 SUPERFAMILY SSF51690 130 294 4.32E-60 T 21-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 VFU_RS04285 ce95500657616d28802c413f7d1ba22a 295 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 26 294 1.9E-92 T 21-04-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 VFU_RS04285 ce95500657616d28802c413f7d1ba22a 295 PIRSF PIRSF006250 16 295 1.1E-99 T 21-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD VFU_RS04285 ce95500657616d28802c413f7d1ba22a 295 Gene3D G3DSA:3.90.1170.20 16 149 8.7E-51 T 21-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 VFU_RS04285 ce95500657616d28802c413f7d1ba22a 295 PANTHER PTHR32179 1 294 2.5E-128 T 21-04-2016 VFU_RS04285 ce95500657616d28802c413f7d1ba22a 295 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 130 293 5.1E-57 T 21-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 VFU_RS04285 ce95500657616d28802c413f7d1ba22a 295 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 41 127 4.5E-26 T 21-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 VFU_RS10070 8756aa227984293cb871d7c20a212ef2 327 Gene3D G3DSA:2.40.50.180 69 104 1.9E-4 T 21-04-2016 VFU_RS10070 8756aa227984293cb871d7c20a212ef2 327 PIRSF PIRSF002867 2 327 3.9E-101 T 21-04-2016 IPR024181 Chemotaxis response regulator CheV VFU_RS10070 8756aa227984293cb871d7c20a212ef2 327 PANTHER PTHR22617 39 179 1.9E-41 T 21-04-2016 VFU_RS10070 8756aa227984293cb871d7c20a212ef2 327 Gene3D G3DSA:3.40.50.2300 195 322 8.1E-30 T 21-04-2016 VFU_RS10070 8756aa227984293cb871d7c20a212ef2 327 PANTHER PTHR22617:SF27 39 179 1.9E-41 T 21-04-2016 VFU_RS10070 8756aa227984293cb871d7c20a212ef2 327 SUPERFAMILY SSF52172 196 324 1.71E-28 T 21-04-2016 IPR011006 CheY-like superfamily VFU_RS10070 8756aa227984293cb871d7c20a212ef2 327 Gene3D G3DSA:2.30.30.40 105 157 7.4E-12 T 21-04-2016 VFU_RS10070 8756aa227984293cb871d7c20a212ef2 327 SMART SM00448 196 321 3.0E-24 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS10070 8756aa227984293cb871d7c20a212ef2 327 Pfam PF00072 Response regulator receiver domain 198 320 1.4E-22 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS10070 8756aa227984293cb871d7c20a212ef2 327 SUPERFAMILY SSF50341 10 168 8.11E-33 T 21-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VFU_RS10070 8756aa227984293cb871d7c20a212ef2 327 SMART SM00260 17 163 3.7E-26 T 21-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VFU_RS10070 8756aa227984293cb871d7c20a212ef2 327 Pfam PF01584 CheW-like domain 38 165 3.8E-30 T 21-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VFU_RS05925 94c7be58809a687917c1c1ea28bcdfb8 103 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 11 102 5.3E-20 T 21-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VFU_RS05925 94c7be58809a687917c1c1ea28bcdfb8 103 Pfam PF02049 Flagellar hook-basal body complex protein FliE 17 103 3.1E-30 T 21-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VFU_RS05925 94c7be58809a687917c1c1ea28bcdfb8 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 32 48 4.9E-13 T 21-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VFU_RS05925 94c7be58809a687917c1c1ea28bcdfb8 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 88 101 4.9E-13 T 21-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VFU_RS05925 94c7be58809a687917c1c1ea28bcdfb8 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 67 83 4.9E-13 T 21-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VFU_RS05925 94c7be58809a687917c1c1ea28bcdfb8 103 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 4 103 16.869 T 21-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VFU_RS05925 94c7be58809a687917c1c1ea28bcdfb8 103 PANTHER PTHR34653 5 103 2.3E-28 T 21-04-2016 VFU_RS06790 5f9ff77585a757db6ab6818891ac5a49 457 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 410 456 1.3E-6 T 21-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VFU_RS06790 5f9ff77585a757db6ab6818891ac5a49 457 PANTHER PTHR30033 1 457 1.4E-73 T 21-04-2016 VFU_RS06790 5f9ff77585a757db6ab6818891ac5a49 457 SUPERFAMILY SSF64518 131 457 6.54E-28 T 21-04-2016 VFU_RS06790 5f9ff77585a757db6ab6818891ac5a49 457 Pfam PF00460 Flagella basal body rod protein 5 33 1.5E-8 T 21-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VFU_RS06790 5f9ff77585a757db6ab6818891ac5a49 457 PANTHER PTHR30033:SF1 1 457 1.4E-73 T 21-04-2016 VFU_RS06790 5f9ff77585a757db6ab6818891ac5a49 457 PRINTS PR01005 Flagellar hook-associated protein signature 122 142 6.8E-11 T 21-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VFU_RS06790 5f9ff77585a757db6ab6818891ac5a49 457 PRINTS PR01005 Flagellar hook-associated protein signature 10 33 6.8E-11 T 21-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VFU_RS06790 5f9ff77585a757db6ab6818891ac5a49 457 PRINTS PR01005 Flagellar hook-associated protein signature 48 70 6.8E-11 T 21-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VFU_RS06790 5f9ff77585a757db6ab6818891ac5a49 457 PRINTS PR01005 Flagellar hook-associated protein signature 155 179 6.8E-11 T 21-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VFU_RS06790 5f9ff77585a757db6ab6818891ac5a49 457 PRINTS PR01005 Flagellar hook-associated protein signature 213 231 6.8E-11 T 21-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VFU_RS06790 5f9ff77585a757db6ab6818891ac5a49 457 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 2 456 5.7E-117 T 21-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VFU_RS12620 74d4dd3a4bc4a4945e5c81acb0c35626 264 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 243 35.313 T 21-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS12620 74d4dd3a4bc4a4945e5c81acb0c35626 264 Gene3D G3DSA:3.30.70.580 1 104 3.4E-39 T 21-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS12620 74d4dd3a4bc4a4945e5c81acb0c35626 264 PANTHER PTHR11142 1 264 1.0E-104 T 21-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS12620 74d4dd3a4bc4a4945e5c81acb0c35626 264 SUPERFAMILY SSF55120 1 256 8.34E-94 T 21-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS12620 74d4dd3a4bc4a4945e5c81acb0c35626 264 Pfam PF01416 tRNA pseudouridine synthase 145 244 5.2E-29 T 21-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS12620 74d4dd3a4bc4a4945e5c81acb0c35626 264 Pfam PF01416 tRNA pseudouridine synthase 8 103 6.0E-11 T 21-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS12620 74d4dd3a4bc4a4945e5c81acb0c35626 264 PIRSF PIRSF001430 1 253 8.7E-77 T 21-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS12620 74d4dd3a4bc4a4945e5c81acb0c35626 264 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 238 4.4E-76 T 21-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS12620 74d4dd3a4bc4a4945e5c81acb0c35626 264 Gene3D G3DSA:3.30.70.660 106 241 7.0E-47 T 21-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS11590 58dcb3f1cec385ea2670a31c6747ef68 582 SUPERFAMILY SSF90123 14 327 1.2E-72 T 21-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VFU_RS11590 58dcb3f1cec385ea2670a31c6747ef68 582 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS11590 58dcb3f1cec385ea2670a31c6747ef68 582 Pfam PF00005 ABC transporter 359 509 7.9E-36 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS11590 58dcb3f1cec385ea2670a31c6747ef68 582 PANTHER PTHR24221 6 582 0.0 T 21-04-2016 VFU_RS11590 58dcb3f1cec385ea2670a31c6747ef68 582 SUPERFAMILY SSF52540 334 580 5.22E-95 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS11590 58dcb3f1cec385ea2670a31c6747ef68 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 582 4.3E-244 T 21-04-2016 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 VFU_RS11590 58dcb3f1cec385ea2670a31c6747ef68 582 Gene3D G3DSA:1.20.1560.10 13 325 3.1E-73 T 21-04-2016 VFU_RS11590 58dcb3f1cec385ea2670a31c6747ef68 582 PANTHER PTHR24221:SF188 6 582 0.0 T 21-04-2016 VFU_RS11590 58dcb3f1cec385ea2670a31c6747ef68 582 Pfam PF00664 ABC transporter transmembrane region 28 295 5.2E-55 T 21-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VFU_RS11590 58dcb3f1cec385ea2670a31c6747ef68 582 Gene3D G3DSA:3.40.50.300 342 574 4.9E-86 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS11590 58dcb3f1cec385ea2670a31c6747ef68 582 SMART SM00382 368 555 2.3E-17 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS07565 42661ca1b1e69c72468b8cf37418b772 300 Gene3D G3DSA:1.10.3720.10 96 297 1.3E-25 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS07565 42661ca1b1e69c72468b8cf37418b772 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 298 3.6E-27 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS07565 42661ca1b1e69c72468b8cf37418b772 300 PANTHER PTHR30465 17 300 2.0E-145 T 21-04-2016 VFU_RS07565 42661ca1b1e69c72468b8cf37418b772 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 76 3.9E-15 T 21-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VFU_RS07565 42661ca1b1e69c72468b8cf37418b772 300 PANTHER PTHR30465:SF9 17 300 2.0E-145 T 21-04-2016 VFU_RS07565 42661ca1b1e69c72468b8cf37418b772 300 SUPERFAMILY SSF161098 96 281 9.68E-27 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS01465 c6291ac3a1728beddc1d8ed2225dd4b3 458 SUPERFAMILY SSF116726 375 437 7.06E-7 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VFU_RS01465 c6291ac3a1728beddc1d8ed2225dd4b3 458 Pfam PF02254 TrkA-N domain 3 115 4.0E-30 T 21-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VFU_RS01465 c6291ac3a1728beddc1d8ed2225dd4b3 458 Pfam PF02254 TrkA-N domain 235 350 1.5E-24 T 21-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VFU_RS01465 c6291ac3a1728beddc1d8ed2225dd4b3 458 SUPERFAMILY SSF51735 1 151 8.9E-37 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS01465 c6291ac3a1728beddc1d8ed2225dd4b3 458 PANTHER PTHR13789 416 440 3.7E-85 T 21-04-2016 VFU_RS01465 c6291ac3a1728beddc1d8ed2225dd4b3 458 PANTHER PTHR13789 1 170 3.7E-85 T 21-04-2016 VFU_RS01465 c6291ac3a1728beddc1d8ed2225dd4b3 458 SUPERFAMILY SSF116726 148 226 9.02E-10 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VFU_RS01465 c6291ac3a1728beddc1d8ed2225dd4b3 458 Gene3D G3DSA:3.30.70.1450 391 436 6.9E-4 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VFU_RS01465 c6291ac3a1728beddc1d8ed2225dd4b3 458 PANTHER PTHR13789:SF225 416 440 3.7E-85 T 21-04-2016 VFU_RS01465 c6291ac3a1728beddc1d8ed2225dd4b3 458 PANTHER PTHR13789:SF225 1 170 3.7E-85 T 21-04-2016 VFU_RS01465 c6291ac3a1728beddc1d8ed2225dd4b3 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 1.7E-34 T 21-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VFU_RS01465 c6291ac3a1728beddc1d8ed2225dd4b3 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 1.7E-34 T 21-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VFU_RS01465 c6291ac3a1728beddc1d8ed2225dd4b3 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 1.7E-34 T 21-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VFU_RS01465 c6291ac3a1728beddc1d8ed2225dd4b3 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 1.7E-34 T 21-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VFU_RS01465 c6291ac3a1728beddc1d8ed2225dd4b3 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 1.7E-34 T 21-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VFU_RS01465 c6291ac3a1728beddc1d8ed2225dd4b3 458 Gene3D G3DSA:3.40.50.720 1 152 9.8E-50 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS01465 c6291ac3a1728beddc1d8ed2225dd4b3 458 Gene3D G3DSA:3.40.50.720 233 376 2.3E-37 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS01465 c6291ac3a1728beddc1d8ed2225dd4b3 458 SUPERFAMILY SSF51735 232 376 1.05E-32 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS01465 c6291ac3a1728beddc1d8ed2225dd4b3 458 Pfam PF02080 TrkA-C domain 391 449 6.1E-9 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VFU_RS01465 c6291ac3a1728beddc1d8ed2225dd4b3 458 Pfam PF02080 TrkA-C domain 156 225 4.1E-11 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VFU_RS06665 c09772cde178f54c48024067b34aa4f4 570 SUPERFAMILY SSF52467 224 364 9.81E-8 T 21-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VFU_RS06665 c09772cde178f54c48024067b34aa4f4 570 Pfam PF16582 Middle domain of thiamine pyrophosphate 188 402 4.5E-41 T 21-04-2016 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 VFU_RS06665 c09772cde178f54c48024067b34aa4f4 570 Gene3D G3DSA:3.40.50.970 12 184 8.9E-43 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold VFU_RS06665 c09772cde178f54c48024067b34aa4f4 570 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 6 567 33.174 T 21-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 VFU_RS06665 c09772cde178f54c48024067b34aa4f4 570 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 420 548 2.1E-5 T 21-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VFU_RS06665 c09772cde178f54c48024067b34aa4f4 570 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 14 173 2.8E-29 T 21-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VFU_RS06665 c09772cde178f54c48024067b34aa4f4 570 Gene3D G3DSA:3.40.50.970 360 560 7.1E-23 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold VFU_RS06665 c09772cde178f54c48024067b34aa4f4 570 SUPERFAMILY SSF52518 9 185 1.12E-31 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold VFU_RS06665 c09772cde178f54c48024067b34aa4f4 570 PIRSF PIRSF004983 3 570 1.0E-187 T 21-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 VFU_RS06665 c09772cde178f54c48024067b34aa4f4 570 SUPERFAMILY SSF52518 376 566 3.21E-26 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold VFU_RS06665 c09772cde178f54c48024067b34aa4f4 570 PANTHER PTHR18968 3 567 1.4E-191 T 21-04-2016 VFU_RS06665 c09772cde178f54c48024067b34aa4f4 570 Gene3D G3DSA:3.40.50.1220 231 339 9.3E-4 T 21-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VFU_RS06665 c09772cde178f54c48024067b34aa4f4 570 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 12 443 1.6E-135 T 21-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 VFU_RS06665 c09772cde178f54c48024067b34aa4f4 570 PANTHER PTHR18968:SF114 3 567 1.4E-191 T 21-04-2016 VFU_RS01270 98f428ec3ac81512f685c32ce5d68546 312 Gene3D G3DSA:1.10.3720.10 91 307 1.0E-27 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS01270 98f428ec3ac81512f685c32ce5d68546 312 SUPERFAMILY SSF161098 93 295 5.1E-25 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS01270 98f428ec3ac81512f685c32ce5d68546 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 309 5.3E-30 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS01270 98f428ec3ac81512f685c32ce5d68546 312 PANTHER PTHR30465:SF67 7 311 2.0E-204 T 21-04-2016 VFU_RS01270 98f428ec3ac81512f685c32ce5d68546 312 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 18 69 5.6E-9 T 21-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VFU_RS01270 98f428ec3ac81512f685c32ce5d68546 312 PANTHER PTHR30465 7 311 2.0E-204 T 21-04-2016 VFU_RS02730 c459ac6ff2eae1b9dc6a25088a0cb58a 90 PANTHER PTHR34476 2 90 2.4E-29 T 21-04-2016 VFU_RS02730 c459ac6ff2eae1b9dc6a25088a0cb58a 90 SMART SM01409 8 61 1.3E-16 T 21-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VFU_RS02730 c459ac6ff2eae1b9dc6a25088a0cb58a 90 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.837 T 21-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VFU_RS02730 c459ac6ff2eae1b9dc6a25088a0cb58a 90 Gene3D G3DSA:3.90.940.10 1 77 4.8E-17 T 21-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VFU_RS02730 c459ac6ff2eae1b9dc6a25088a0cb58a 90 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 1.8E-29 T 21-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VFU_RS02730 c459ac6ff2eae1b9dc6a25088a0cb58a 90 Pfam PF01192 RNA polymerase Rpb6 10 60 3.1E-18 T 21-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VFU_RS02730 c459ac6ff2eae1b9dc6a25088a0cb58a 90 SUPERFAMILY SSF63562 1 78 8.89E-26 T 21-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VFU_RS04645 aab5293485b3bfa7a659d7097395de89 305 SUPERFAMILY SSF48452 35 287 5.82E-67 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VFU_RS04645 aab5293485b3bfa7a659d7097395de89 305 Gene3D G3DSA:1.25.40.10 49 297 2.4E-27 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VFU_RS04645 aab5293485b3bfa7a659d7097395de89 305 SMART SM00028 238 271 11.0 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VFU_RS04645 aab5293485b3bfa7a659d7097395de89 305 SMART SM00028 67 100 0.6 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VFU_RS04645 aab5293485b3bfa7a659d7097395de89 305 SMART SM00028 135 168 330.0 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VFU_RS04645 aab5293485b3bfa7a659d7097395de89 305 SMART SM00028 101 134 5.2E-4 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VFU_RS04645 aab5293485b3bfa7a659d7097395de89 305 PIRSF PIRSF004654 1 295 1.0E-87 T 21-04-2016 IPR023605 Lipoprotein NlpI VFU_RS04645 aab5293485b3bfa7a659d7097395de89 305 PANTHER PTHR23083 238 300 4.6E-20 T 21-04-2016 VFU_RS04645 aab5293485b3bfa7a659d7097395de89 305 PANTHER PTHR23083 49 168 4.6E-20 T 21-04-2016 VFU_RS10055 35468825977f765eb9b4d3245ff0e7ed 201 PANTHER PTHR11938 1 101 2.0E-37 T 21-04-2016 VFU_RS10055 35468825977f765eb9b4d3245ff0e7ed 201 PANTHER PTHR11938 143 172 2.0E-37 T 21-04-2016 VFU_RS10055 35468825977f765eb9b4d3245ff0e7ed 201 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 82 93 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VFU_RS10055 35468825977f765eb9b4d3245ff0e7ed 201 Gene3D G3DSA:3.30.70.20 64 104 7.7E-18 T 21-04-2016 VFU_RS10055 35468825977f765eb9b4d3245ff0e7ed 201 Pfam PF13187 4Fe-4S dicluster domain 82 171 9.3E-8 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VFU_RS10055 35468825977f765eb9b4d3245ff0e7ed 201 Gene3D G3DSA:3.30.70.20 141 183 3.6E-17 T 21-04-2016 VFU_RS10055 35468825977f765eb9b4d3245ff0e7ed 201 Gene3D G3DSA:3.30.70.20 6 63 7.9E-10 T 21-04-2016 VFU_RS10055 35468825977f765eb9b4d3245ff0e7ed 201 PANTHER PTHR11938:SF111 1 101 2.0E-37 T 21-04-2016 VFU_RS10055 35468825977f765eb9b4d3245ff0e7ed 201 PANTHER PTHR11938:SF111 143 172 2.0E-37 T 21-04-2016 VFU_RS10055 35468825977f765eb9b4d3245ff0e7ed 201 SUPERFAMILY SSF54862 3 101 3.01E-40 T 21-04-2016 VFU_RS10055 35468825977f765eb9b4d3245ff0e7ed 201 SUPERFAMILY SSF54862 143 177 3.01E-40 T 21-04-2016 VFU_RS07255 7e6c229df8481105de52d5b682a71e60 539 PANTHER PTHR24095 12 537 2.3E-251 T 21-04-2016 VFU_RS07255 7e6c229df8481105de52d5b682a71e60 539 Gene3D G3DSA:3.40.50.980 29 199 9.9E-28 T 21-04-2016 VFU_RS07255 7e6c229df8481105de52d5b682a71e60 539 Pfam PF13193 AMP-binding enzyme C-terminal domain 452 528 1.3E-12 T 21-04-2016 IPR025110 AMP-binding enzyme C-terminal domain VFU_RS07255 7e6c229df8481105de52d5b682a71e60 539 Gene3D G3DSA:3.30.300.30 438 538 7.6E-28 T 21-04-2016 VFU_RS07255 7e6c229df8481105de52d5b682a71e60 539 Pfam PF00501 AMP-binding enzyme 39 443 4.3E-76 T 21-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VFU_RS07255 7e6c229df8481105de52d5b682a71e60 539 ProSitePatterns PS00455 Putative AMP-binding domain signature. 195 206 - T 21-04-2016 IPR020845 AMP-binding, conserved site VFU_RS07255 7e6c229df8481105de52d5b682a71e60 539 Gene3D G3DSA:3.40.50.980 200 362 3.7E-34 T 21-04-2016 VFU_RS07255 7e6c229df8481105de52d5b682a71e60 539 PANTHER PTHR24095:SF123 12 537 2.3E-251 T 21-04-2016 VFU_RS07255 7e6c229df8481105de52d5b682a71e60 539 SUPERFAMILY SSF56801 8 538 1.31E-133 T 21-04-2016 VFU_RS07255 7e6c229df8481105de52d5b682a71e60 539 TIGRFAM TIGR02275 DHB_AMP_lig: (2,3-dihydroxybenzoyl)adenylate synthase 8 535 1.8E-252 T 21-04-2016 IPR011963 2,3-dihydroxybenzoate-AMP ligase GO:0008668|GO:0019290 VFU_RS07255 7e6c229df8481105de52d5b682a71e60 539 Gene3D G3DSA:2.30.38.10 363 436 4.3E-21 T 21-04-2016 VFU_RS11055 1f867e91db401e3118701b1124a262b6 249 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 49 245 1.0E-77 T 21-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VFU_RS11055 1f867e91db401e3118701b1124a262b6 249 PANTHER PTHR30587 30 247 2.0E-111 T 21-04-2016 VFU_RS11055 1f867e91db401e3118701b1124a262b6 249 Pfam PF00813 FliP family 49 241 3.5E-76 T 21-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VFU_RS11055 1f867e91db401e3118701b1124a262b6 249 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 222 234 - T 21-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VFU_RS11055 1f867e91db401e3118701b1124a262b6 249 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 117 131 1.3E-18 T 21-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VFU_RS11055 1f867e91db401e3118701b1124a262b6 249 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 105 117 1.3E-18 T 21-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VFU_RS11055 1f867e91db401e3118701b1124a262b6 249 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 167 179 1.3E-18 T 21-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VFU_RS11055 1f867e91db401e3118701b1124a262b6 249 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 45 54 1.3E-18 T 21-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VFU_RS11055 1f867e91db401e3118701b1124a262b6 249 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 235 245 1.3E-18 T 21-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VFU_RS11055 1f867e91db401e3118701b1124a262b6 249 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 47 66 9.2E-65 T 21-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VFU_RS11055 1f867e91db401e3118701b1124a262b6 249 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 219 244 9.2E-65 T 21-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VFU_RS11055 1f867e91db401e3118701b1124a262b6 249 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 86 105 9.2E-65 T 21-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VFU_RS11055 1f867e91db401e3118701b1124a262b6 249 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 174 194 9.2E-65 T 21-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VFU_RS11055 1f867e91db401e3118701b1124a262b6 249 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 195 216 9.2E-65 T 21-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VFU_RS11055 1f867e91db401e3118701b1124a262b6 249 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 66 86 9.2E-65 T 21-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VFU_RS11055 1f867e91db401e3118701b1124a262b6 249 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 174 189 - T 21-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VFU_RS11055 1f867e91db401e3118701b1124a262b6 249 PANTHER PTHR30587:SF0 30 247 2.0E-111 T 21-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VFU_RS00375 e66dc93f476af3bac8e958e40118ac10 1143 Pfam PF12860 PAS fold 634 748 1.1E-44 T 21-04-2016 VFU_RS00375 e66dc93f476af3bac8e958e40118ac10 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 966 984 1.3E-9 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS00375 e66dc93f476af3bac8e958e40118ac10 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 933 947 1.3E-9 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS00375 e66dc93f476af3bac8e958e40118ac10 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 990 1003 1.3E-9 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS00375 e66dc93f476af3bac8e958e40118ac10 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 951 961 1.3E-9 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS00375 e66dc93f476af3bac8e958e40118ac10 1143 Gene3D G3DSA:3.30.565.10 854 1006 1.2E-38 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS00375 e66dc93f476af3bac8e958e40118ac10 1143 PANTHER PTHR24423:SF439 626 760 3.2E-236 T 21-04-2016 VFU_RS00375 e66dc93f476af3bac8e958e40118ac10 1143 PANTHER PTHR24423:SF439 179 198 3.2E-236 T 21-04-2016 VFU_RS00375 e66dc93f476af3bac8e958e40118ac10 1143 PANTHER PTHR24423:SF439 9 60 3.2E-236 T 21-04-2016 VFU_RS00375 e66dc93f476af3bac8e958e40118ac10 1143 PANTHER PTHR24423:SF439 786 1141 3.2E-236 T 21-04-2016 VFU_RS00375 e66dc93f476af3bac8e958e40118ac10 1143 SMART SM00387 897 1006 1.8E-27 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS00375 e66dc93f476af3bac8e958e40118ac10 1143 SUPERFAMILY SSF52172 1026 1142 7.97E-19 T 21-04-2016 IPR011006 CheY-like superfamily VFU_RS00375 e66dc93f476af3bac8e958e40118ac10 1143 Pfam PF00512 His Kinase A (phospho-acceptor) domain 788 853 3.5E-11 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS00375 e66dc93f476af3bac8e958e40118ac10 1143 Gene3D G3DSA:1.10.287.130 780 849 8.0E-12 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS00375 e66dc93f476af3bac8e958e40118ac10 1143 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 898 1004 3.8E-19 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS00375 e66dc93f476af3bac8e958e40118ac10 1143 SUPERFAMILY SSF47384 773 854 8.24E-15 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS00375 e66dc93f476af3bac8e958e40118ac10 1143 SUPERFAMILY SSF55785 626 741 3.56E-9 T 21-04-2016 IPR000014 PAS domain VFU_RS00375 e66dc93f476af3bac8e958e40118ac10 1143 SUPERFAMILY SSF55874 843 1002 3.41E-37 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS00375 e66dc93f476af3bac8e958e40118ac10 1143 SMART SM00448 1026 1139 2.3E-17 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS00375 e66dc93f476af3bac8e958e40118ac10 1143 Gene3D G3DSA:3.40.50.2300 1025 1142 4.8E-17 T 21-04-2016 VFU_RS00375 e66dc93f476af3bac8e958e40118ac10 1143 SMART SM00388 788 853 2.7E-12 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS00375 e66dc93f476af3bac8e958e40118ac10 1143 Pfam PF00072 Response regulator receiver domain 1028 1139 2.7E-12 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS00375 e66dc93f476af3bac8e958e40118ac10 1143 Gene3D G3DSA:3.30.450.20 626 741 1.2E-14 T 21-04-2016 VFU_RS00375 e66dc93f476af3bac8e958e40118ac10 1143 PANTHER PTHR24423 626 760 3.2E-236 T 21-04-2016 VFU_RS00375 e66dc93f476af3bac8e958e40118ac10 1143 PANTHER PTHR24423 179 198 3.2E-236 T 21-04-2016 VFU_RS00375 e66dc93f476af3bac8e958e40118ac10 1143 PANTHER PTHR24423 9 60 3.2E-236 T 21-04-2016 VFU_RS00375 e66dc93f476af3bac8e958e40118ac10 1143 PANTHER PTHR24423 786 1141 3.2E-236 T 21-04-2016 VFU_RS01610 e8e6000388dc27bd8bd6d135743338c6 805 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 174 1.1E-23 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS01610 e8e6000388dc27bd8bd6d135743338c6 805 Pfam PF00204 DNA gyrase B 221 391 1.8E-59 T 21-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS01610 e8e6000388dc27bd8bd6d135743338c6 805 SUPERFAMILY SSF56719 395 561 2.88E-88 T 21-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 VFU_RS01610 e8e6000388dc27bd8bd6d135743338c6 805 SUPERFAMILY SSF56719 731 796 2.88E-88 T 21-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 VFU_RS01610 e8e6000388dc27bd8bd6d135743338c6 805 ProSitePatterns PS00177 DNA topoisomerase II signature. 423 431 - T 21-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS01610 e8e6000388dc27bd8bd6d135743338c6 805 PRINTS PR00418 DNA topoisomerase II family signature 737 753 4.8E-71 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS01610 e8e6000388dc27bd8bd6d135743338c6 805 PRINTS PR00418 DNA topoisomerase II family signature 488 504 4.8E-71 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS01610 e8e6000388dc27bd8bd6d135743338c6 805 PRINTS PR00418 DNA topoisomerase II family signature 269 282 4.8E-71 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS01610 e8e6000388dc27bd8bd6d135743338c6 805 PRINTS PR00418 DNA topoisomerase II family signature 421 435 4.8E-71 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS01610 e8e6000388dc27bd8bd6d135743338c6 805 PRINTS PR00418 DNA topoisomerase II family signature 506 523 4.8E-71 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS01610 e8e6000388dc27bd8bd6d135743338c6 805 PRINTS PR00418 DNA topoisomerase II family signature 35 50 4.8E-71 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS01610 e8e6000388dc27bd8bd6d135743338c6 805 PRINTS PR00418 DNA topoisomerase II family signature 113 127 4.8E-71 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS01610 e8e6000388dc27bd8bd6d135743338c6 805 PRINTS PR00418 DNA topoisomerase II family signature 70 83 4.8E-71 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS01610 e8e6000388dc27bd8bd6d135743338c6 805 PRINTS PR00418 DNA topoisomerase II family signature 526 538 4.8E-71 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS01610 e8e6000388dc27bd8bd6d135743338c6 805 Gene3D G3DSA:3.30.230.10 220 393 1.3E-76 T 21-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VFU_RS01610 e8e6000388dc27bd8bd6d135743338c6 805 PANTHER PTHR10169 723 805 0.0 T 21-04-2016 VFU_RS01610 e8e6000388dc27bd8bd6d135743338c6 805 PANTHER PTHR10169 1 554 0.0 T 21-04-2016 VFU_RS01610 e8e6000388dc27bd8bd6d135743338c6 805 SUPERFAMILY SSF54211 221 393 3.03E-58 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VFU_RS01610 e8e6000388dc27bd8bd6d135743338c6 805 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 733 794 9.5E-31 T 21-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS01610 e8e6000388dc27bd8bd6d135743338c6 805 Pfam PF01751 Toprim domain 420 532 1.0E-18 T 21-04-2016 IPR006171 Toprim domain VFU_RS01610 e8e6000388dc27bd8bd6d135743338c6 805 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 805 0.0 T 21-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VFU_RS01610 e8e6000388dc27bd8bd6d135743338c6 805 PRINTS PR01159 DNA gyrase subunit B signature 774 790 1.9E-87 T 21-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS01610 e8e6000388dc27bd8bd6d135743338c6 805 PRINTS PR01159 DNA gyrase subunit B signature 375 395 1.9E-87 T 21-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS01610 e8e6000388dc27bd8bd6d135743338c6 805 PRINTS PR01159 DNA gyrase subunit B signature 758 770 1.9E-87 T 21-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS01610 e8e6000388dc27bd8bd6d135743338c6 805 PRINTS PR01159 DNA gyrase subunit B signature 5 15 1.9E-87 T 21-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS01610 e8e6000388dc27bd8bd6d135743338c6 805 PRINTS PR01159 DNA gyrase subunit B signature 220 242 1.9E-87 T 21-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS01610 e8e6000388dc27bd8bd6d135743338c6 805 PRINTS PR01159 DNA gyrase subunit B signature 180 195 1.9E-87 T 21-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS01610 e8e6000388dc27bd8bd6d135743338c6 805 PRINTS PR01159 DNA gyrase subunit B signature 313 329 1.9E-87 T 21-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS01610 e8e6000388dc27bd8bd6d135743338c6 805 PRINTS PR01159 DNA gyrase subunit B signature 195 208 1.9E-87 T 21-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS01610 e8e6000388dc27bd8bd6d135743338c6 805 PRINTS PR01159 DNA gyrase subunit B signature 361 375 1.9E-87 T 21-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS01610 e8e6000388dc27bd8bd6d135743338c6 805 PRINTS PR01159 DNA gyrase subunit B signature 243 261 1.9E-87 T 21-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS01610 e8e6000388dc27bd8bd6d135743338c6 805 PRINTS PR01159 DNA gyrase subunit B signature 471 480 1.9E-87 T 21-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS01610 e8e6000388dc27bd8bd6d135743338c6 805 Gene3D G3DSA:3.30.565.10 15 214 5.7E-92 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS01610 e8e6000388dc27bd8bd6d135743338c6 805 Gene3D G3DSA:2.40.128.20 651 732 5.2E-4 T 21-04-2016 IPR012674 Calycin VFU_RS01610 e8e6000388dc27bd8bd6d135743338c6 805 SMART SM00433 35 798 1.0E-272 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS01610 e8e6000388dc27bd8bd6d135743338c6 805 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 805 108.305 T 21-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VFU_RS01610 e8e6000388dc27bd8bd6d135743338c6 805 SMART SM00387 31 175 3.4E-27 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS01610 e8e6000388dc27bd8bd6d135743338c6 805 Gene3D G3DSA:3.40.50.670 405 551 6.5E-102 T 21-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS01610 e8e6000388dc27bd8bd6d135743338c6 805 Gene3D G3DSA:3.40.50.670 733 787 6.5E-102 T 21-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS01610 e8e6000388dc27bd8bd6d135743338c6 805 SUPERFAMILY SSF55874 4 212 1.31E-74 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS12430 39676518b5ebd092f782ab568c5a2ce7 201 PIRSF PIRSF015617 6 201 2.2E-64 T 21-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 VFU_RS12430 39676518b5ebd092f782ab568c5a2ce7 201 PANTHER PTHR30069 4 201 2.2E-64 T 21-04-2016 VFU_RS12430 39676518b5ebd092f782ab568c5a2ce7 201 Gene3D G3DSA:3.40.50.300 8 201 1.1E-74 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS12430 39676518b5ebd092f782ab568c5a2ce7 201 SUPERFAMILY SSF52540 12 201 1.02E-69 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS12430 39676518b5ebd092f782ab568c5a2ce7 201 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 29 201 1.8E-68 T 21-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 VFU_RS12430 39676518b5ebd092f782ab568c5a2ce7 201 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 33 201 7.9E-58 T 21-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 VFU_RS12430 39676518b5ebd092f782ab568c5a2ce7 201 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 3 26 4.4E-7 T 21-04-2016 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 VFU_RS13930 aed42c74a591cd6fe0afe9cfbe026938 301 PANTHER PTHR30537 1 299 3.1E-82 T 21-04-2016 VFU_RS13930 aed42c74a591cd6fe0afe9cfbe026938 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 4.2E-9 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS13930 aed42c74a591cd6fe0afe9cfbe026938 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 4.2E-9 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS13930 aed42c74a591cd6fe0afe9cfbe026938 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 4.2E-9 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS13930 aed42c74a591cd6fe0afe9cfbe026938 301 Pfam PF03466 LysR substrate binding domain 90 295 9.5E-31 T 21-04-2016 IPR005119 LysR, substrate-binding VFU_RS13930 aed42c74a591cd6fe0afe9cfbe026938 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 3.4E-20 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS13930 aed42c74a591cd6fe0afe9cfbe026938 301 Gene3D G3DSA:3.40.190.10 181 261 4.9E-17 T 21-04-2016 VFU_RS13930 aed42c74a591cd6fe0afe9cfbe026938 301 SUPERFAMILY SSF53850 91 298 4.5E-32 T 21-04-2016 VFU_RS13930 aed42c74a591cd6fe0afe9cfbe026938 301 PANTHER PTHR30537:SF26 1 299 3.1E-82 T 21-04-2016 VFU_RS13930 aed42c74a591cd6fe0afe9cfbe026938 301 Gene3D G3DSA:3.40.190.10 94 180 3.3E-26 T 21-04-2016 VFU_RS13930 aed42c74a591cd6fe0afe9cfbe026938 301 SUPERFAMILY SSF46785 6 80 2.69E-20 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS13930 aed42c74a591cd6fe0afe9cfbe026938 301 Gene3D G3DSA:1.10.10.10 4 87 7.6E-25 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS13305 77eee3596838b531a5f9f70292129cda 298 SUPERFAMILY SSF46785 6 113 1.72E-22 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS13305 77eee3596838b531a5f9f70292129cda 298 Gene3D G3DSA:1.10.10.10 7 88 4.7E-24 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS13305 77eee3596838b531a5f9f70292129cda 298 PANTHER PTHR30537 1 294 1.7E-115 T 21-04-2016 VFU_RS13305 77eee3596838b531a5f9f70292129cda 298 Gene3D G3DSA:3.40.190.10 94 193 4.9E-29 T 21-04-2016 VFU_RS13305 77eee3596838b531a5f9f70292129cda 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 7.2E-6 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS13305 77eee3596838b531a5f9f70292129cda 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 7.2E-6 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS13305 77eee3596838b531a5f9f70292129cda 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 7.2E-6 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS13305 77eee3596838b531a5f9f70292129cda 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 1.0E-18 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS13305 77eee3596838b531a5f9f70292129cda 298 Pfam PF03466 LysR substrate binding domain 90 292 7.5E-27 T 21-04-2016 IPR005119 LysR, substrate-binding VFU_RS13305 77eee3596838b531a5f9f70292129cda 298 SUPERFAMILY SSF53850 92 292 1.41E-29 T 21-04-2016 VFU_RS13305 77eee3596838b531a5f9f70292129cda 298 PANTHER PTHR30537:SF8 1 294 1.7E-115 T 21-04-2016 VFU_RS04530 d199578f58d93a11f1bd264f61f5ba97 430 Pfam PF04225 Opacity-associated protein A LysM-like domain 72 134 7.1E-5 T 21-04-2016 IPR007340 Opacity-associated protein A VFU_RS04530 d199578f58d93a11f1bd264f61f5ba97 430 PANTHER PTHR21666:SF221 1 410 2.2E-142 T 21-04-2016 VFU_RS04530 d199578f58d93a11f1bd264f61f5ba97 430 Pfam PF08525 Opacity-associated protein A N-terminal motif 4 31 1.4E-5 T 21-04-2016 IPR013731 Opacity-associated protein A, N-terminal VFU_RS04530 d199578f58d93a11f1bd264f61f5ba97 430 Pfam PF01551 Peptidase family M23 295 389 2.7E-30 T 21-04-2016 IPR016047 Peptidase M23 VFU_RS04530 d199578f58d93a11f1bd264f61f5ba97 430 SUPERFAMILY SSF51261 145 390 2.04E-69 T 21-04-2016 IPR011055 Duplicated hybrid motif VFU_RS04530 d199578f58d93a11f1bd264f61f5ba97 430 Gene3D G3DSA:2.70.70.10 250 392 2.0E-43 T 21-04-2016 VFU_RS04530 d199578f58d93a11f1bd264f61f5ba97 430 PANTHER PTHR21666 1 410 2.2E-142 T 21-04-2016 VFU_RS10625 ccf514c006ddd05e5932eff0cf611423 448 SMART SM01230 113 370 2.1E-81 T 21-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VFU_RS10625 ccf514c006ddd05e5932eff0cf611423 448 SUPERFAMILY SSF54368 13 109 1.44E-6 T 21-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VFU_RS10625 ccf514c006ddd05e5932eff0cf611423 448 Gene3D G3DSA:3.10.20.70 14 109 9.4E-6 T 21-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VFU_RS10625 ccf514c006ddd05e5932eff0cf611423 448 Gene3D G3DSA:3.30.590.10 116 435 1.9E-77 T 21-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 VFU_RS10625 ccf514c006ddd05e5932eff0cf611423 448 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 251 266 - T 21-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VFU_RS10625 ccf514c006ddd05e5932eff0cf611423 448 PANTHER PTHR20852:SF7 6 445 7.8E-95 T 21-04-2016 VFU_RS10625 ccf514c006ddd05e5932eff0cf611423 448 Pfam PF00120 Glutamine synthetase, catalytic domain 115 443 4.3E-86 T 21-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VFU_RS10625 ccf514c006ddd05e5932eff0cf611423 448 SUPERFAMILY SSF55931 115 445 6.38E-87 T 21-04-2016 VFU_RS10625 ccf514c006ddd05e5932eff0cf611423 448 PANTHER PTHR20852 6 445 7.8E-95 T 21-04-2016 VFU_RS08025 69f8be618133945dc0b0add678d220eb 242 SUPERFAMILY SSF53335 20 242 4.8E-39 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS08025 69f8be618133945dc0b0add678d220eb 242 Hamap MF_01589 tRNA (cmo5U34)-methyltransferase [cmoA]. 3 242 43.37 T 21-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 VFU_RS08025 69f8be618133945dc0b0add678d220eb 242 PANTHER PTHR10108:SF809 1 241 5.5E-117 T 21-04-2016 VFU_RS08025 69f8be618133945dc0b0add678d220eb 242 Pfam PF13649 Methyltransferase domain 62 158 1.1E-12 T 21-04-2016 VFU_RS08025 69f8be618133945dc0b0add678d220eb 242 PANTHER PTHR10108 1 241 5.5E-117 T 21-04-2016 VFU_RS08025 69f8be618133945dc0b0add678d220eb 242 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 4 242 7.7E-118 T 21-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 VFU_RS08025 69f8be618133945dc0b0add678d220eb 242 Gene3D G3DSA:3.40.50.150 19 241 1.1E-63 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS08025 69f8be618133945dc0b0add678d220eb 242 PIRSF PIRSF006325 1 242 1.2E-125 T 21-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 VFU_RS04240 db62bf503a75f95707b5a9a7f51e6ec8 626 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 170 2.6E-18 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS04240 db62bf503a75f95707b5a9a7f51e6ec8 626 SUPERFAMILY SSF54211 217 382 1.23E-46 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VFU_RS04240 db62bf503a75f95707b5a9a7f51e6ec8 626 SUPERFAMILY SSF56719 388 619 5.23E-80 T 21-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 VFU_RS04240 db62bf503a75f95707b5a9a7f51e6ec8 626 SMART SM00433 34 622 5.5E-213 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS04240 db62bf503a75f95707b5a9a7f51e6ec8 626 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 626 46.978 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VFU_RS04240 db62bf503a75f95707b5a9a7f51e6ec8 626 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 1.9E-127 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VFU_RS04240 db62bf503a75f95707b5a9a7f51e6ec8 626 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 1.9E-127 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VFU_RS04240 db62bf503a75f95707b5a9a7f51e6ec8 626 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 1.9E-127 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VFU_RS04240 db62bf503a75f95707b5a9a7f51e6ec8 626 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 1.9E-127 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VFU_RS04240 db62bf503a75f95707b5a9a7f51e6ec8 626 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 1.9E-127 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VFU_RS04240 db62bf503a75f95707b5a9a7f51e6ec8 626 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 1.9E-127 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VFU_RS04240 db62bf503a75f95707b5a9a7f51e6ec8 626 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 1.9E-127 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VFU_RS04240 db62bf503a75f95707b5a9a7f51e6ec8 626 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 1.9E-127 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VFU_RS04240 db62bf503a75f95707b5a9a7f51e6ec8 626 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 1.9E-127 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VFU_RS04240 db62bf503a75f95707b5a9a7f51e6ec8 626 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 1.9E-127 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VFU_RS04240 db62bf503a75f95707b5a9a7f51e6ec8 626 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 1.9E-127 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VFU_RS04240 db62bf503a75f95707b5a9a7f51e6ec8 626 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 1.9E-127 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VFU_RS04240 db62bf503a75f95707b5a9a7f51e6ec8 626 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 1.9E-127 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VFU_RS04240 db62bf503a75f95707b5a9a7f51e6ec8 626 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 1.9E-127 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VFU_RS04240 db62bf503a75f95707b5a9a7f51e6ec8 626 Gene3D G3DSA:3.40.50.670 398 609 2.9E-80 T 21-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS04240 db62bf503a75f95707b5a9a7f51e6ec8 626 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 3 623 0.0 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VFU_RS04240 db62bf503a75f95707b5a9a7f51e6ec8 626 Pfam PF01751 Toprim domain 413 521 6.6E-12 T 21-04-2016 IPR006171 Toprim domain VFU_RS04240 db62bf503a75f95707b5a9a7f51e6ec8 626 Gene3D G3DSA:3.30.565.10 15 211 3.6E-75 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS04240 db62bf503a75f95707b5a9a7f51e6ec8 626 Gene3D G3DSA:3.30.230.10 216 390 4.1E-48 T 21-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VFU_RS04240 db62bf503a75f95707b5a9a7f51e6ec8 626 SUPERFAMILY SSF55874 5 215 1.72E-65 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS04240 db62bf503a75f95707b5a9a7f51e6ec8 626 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 556 618 1.2E-27 T 21-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS04240 db62bf503a75f95707b5a9a7f51e6ec8 626 Pfam PF00204 DNA gyrase B 218 384 3.1E-42 T 21-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS04240 db62bf503a75f95707b5a9a7f51e6ec8 626 PRINTS PR00418 DNA topoisomerase II family signature 517 529 1.5E-58 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS04240 db62bf503a75f95707b5a9a7f51e6ec8 626 PRINTS PR00418 DNA topoisomerase II family signature 497 514 1.5E-58 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS04240 db62bf503a75f95707b5a9a7f51e6ec8 626 PRINTS PR00418 DNA topoisomerase II family signature 560 576 1.5E-58 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS04240 db62bf503a75f95707b5a9a7f51e6ec8 626 PRINTS PR00418 DNA topoisomerase II family signature 266 279 1.5E-58 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS04240 db62bf503a75f95707b5a9a7f51e6ec8 626 PRINTS PR00418 DNA topoisomerase II family signature 31 46 1.5E-58 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS04240 db62bf503a75f95707b5a9a7f51e6ec8 626 PRINTS PR00418 DNA topoisomerase II family signature 66 79 1.5E-58 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS04240 db62bf503a75f95707b5a9a7f51e6ec8 626 PRINTS PR00418 DNA topoisomerase II family signature 414 428 1.5E-58 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS04240 db62bf503a75f95707b5a9a7f51e6ec8 626 PRINTS PR00418 DNA topoisomerase II family signature 109 123 1.5E-58 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS04240 db62bf503a75f95707b5a9a7f51e6ec8 626 PRINTS PR00418 DNA topoisomerase II family signature 479 495 1.5E-58 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS04240 db62bf503a75f95707b5a9a7f51e6ec8 626 PANTHER PTHR10169 1 622 0.0 T 21-04-2016 VFU_RS04240 db62bf503a75f95707b5a9a7f51e6ec8 626 PANTHER PTHR10169:SF45 1 622 0.0 T 21-04-2016 VFU_RS04240 db62bf503a75f95707b5a9a7f51e6ec8 626 ProSitePatterns PS00177 DNA topoisomerase II signature. 416 424 - T 21-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS04240 db62bf503a75f95707b5a9a7f51e6ec8 626 SMART SM00387 27 173 2.2E-19 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS04710 100ffa20bb93faea43765c45d7be3d2f 239 Pfam PF05175 Methyltransferase small domain 43 145 1.1E-18 T 21-04-2016 IPR007848 Methyltransferase small domain GO:0008168 VFU_RS04710 100ffa20bb93faea43765c45d7be3d2f 239 SUPERFAMILY SSF53335 34 185 1.84E-29 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS04710 100ffa20bb93faea43765c45d7be3d2f 239 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 114 120 - T 21-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VFU_RS04710 100ffa20bb93faea43765c45d7be3d2f 239 Gene3D G3DSA:3.40.50.150 30 230 1.6E-46 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS04710 100ffa20bb93faea43765c45d7be3d2f 239 PANTHER PTHR18895:SF73 32 229 3.0E-65 T 21-04-2016 VFU_RS04710 100ffa20bb93faea43765c45d7be3d2f 239 PANTHER PTHR18895 32 229 3.0E-65 T 21-04-2016 VFU_RS04710 100ffa20bb93faea43765c45d7be3d2f 239 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 9 239 52.912 T 21-04-2016 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 KEGG: 00340+2.1.1.22 VFU_RS07485 d447f8188a280394762749f88011d153 210 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 44 196 6.1E-9 T 21-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like VFU_RS07485 d447f8188a280394762749f88011d153 210 Gene3D G3DSA:2.50.20.10 31 197 2.6E-13 T 21-04-2016 VFU_RS07485 d447f8188a280394762749f88011d153 210 SUPERFAMILY SSF89392 31 196 1.06E-16 T 21-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX VFU_RS05915 194b9be5ca2378670c7f031e8c3bc3d6 350 SUPERFAMILY SSF55874 179 340 5.89E-36 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS05915 194b9be5ca2378670c7f031e8c3bc3d6 350 PANTHER PTHR24423 3 349 2.3E-121 T 21-04-2016 VFU_RS05915 194b9be5ca2378670c7f031e8c3bc3d6 350 SMART SM00091 20 83 1.7E-5 T 21-04-2016 IPR000014 PAS domain VFU_RS05915 194b9be5ca2378670c7f031e8c3bc3d6 350 Pfam PF00512 His Kinase A (phospho-acceptor) domain 124 188 3.2E-10 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS05915 194b9be5ca2378670c7f031e8c3bc3d6 350 SMART SM00388 124 190 3.0E-12 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS05915 194b9be5ca2378670c7f031e8c3bc3d6 350 SUPERFAMILY SSF47384 119 190 8.83E-10 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS05915 194b9be5ca2378670c7f031e8c3bc3d6 350 Gene3D G3DSA:1.10.287.130 121 186 5.4E-7 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS05915 194b9be5ca2378670c7f031e8c3bc3d6 350 SUPERFAMILY SSF55785 7 87 2.28E-9 T 21-04-2016 IPR000014 PAS domain VFU_RS05915 194b9be5ca2378670c7f031e8c3bc3d6 350 Pfam PF13188 PAS domain 20 65 3.5E-7 T 21-04-2016 IPR000014 PAS domain VFU_RS05915 194b9be5ca2378670c7f031e8c3bc3d6 350 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 237 338 7.4E-20 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS05915 194b9be5ca2378670c7f031e8c3bc3d6 350 Gene3D G3DSA:3.30.450.20 20 89 7.3E-9 T 21-04-2016 VFU_RS05915 194b9be5ca2378670c7f031e8c3bc3d6 350 PRINTS PR00344 Bacterial sensor protein C-terminal signature 270 284 2.7E-18 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS05915 194b9be5ca2378670c7f031e8c3bc3d6 350 PRINTS PR00344 Bacterial sensor protein C-terminal signature 288 298 2.7E-18 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS05915 194b9be5ca2378670c7f031e8c3bc3d6 350 PRINTS PR00344 Bacterial sensor protein C-terminal signature 323 336 2.7E-18 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS05915 194b9be5ca2378670c7f031e8c3bc3d6 350 PRINTS PR00344 Bacterial sensor protein C-terminal signature 299 317 2.7E-18 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS05915 194b9be5ca2378670c7f031e8c3bc3d6 350 SMART SM00387 233 339 9.6E-30 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS05915 194b9be5ca2378670c7f031e8c3bc3d6 350 PANTHER PTHR24423:SF474 3 349 2.3E-121 T 21-04-2016 VFU_RS05915 194b9be5ca2378670c7f031e8c3bc3d6 350 Gene3D G3DSA:3.30.565.10 194 338 4.0E-37 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS01570 f660a4755c6b061e3980d4f4f23116eb 82 Gene3D G3DSA:3.30.110.40 9 80 4.4E-27 T 21-04-2016 IPR001455 TusA-like domain VFU_RS01570 f660a4755c6b061e3980d4f4f23116eb 82 PANTHER PTHR33279:SF5 1 80 2.2E-48 T 21-04-2016 VFU_RS01570 f660a4755c6b061e3980d4f4f23116eb 82 PANTHER PTHR33279 1 80 2.2E-48 T 21-04-2016 VFU_RS01570 f660a4755c6b061e3980d4f4f23116eb 82 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 21-04-2016 IPR001455 TusA-like domain VFU_RS01570 f660a4755c6b061e3980d4f4f23116eb 82 Hamap MF_00413 Sulfurtransferase TusA [tusA]. 3 81 28.237 T 21-04-2016 IPR022931 Sulphurtransferase TusA GO:0016783 VFU_RS01570 f660a4755c6b061e3980d4f4f23116eb 82 Pfam PF01206 Sulfurtransferase TusA 12 79 7.4E-22 T 21-04-2016 IPR001455 TusA-like domain VFU_RS01570 f660a4755c6b061e3980d4f4f23116eb 82 SUPERFAMILY SSF64307 9 80 1.31E-23 T 21-04-2016 IPR001455 TusA-like domain VFU_RS08665 9b023071dda1cfd2c2ab0543defd1f1d 121 PANTHER PTHR12589 1 121 6.3E-50 T 21-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein VFU_RS08665 9b023071dda1cfd2c2ab0543defd1f1d 121 PIRSF PIRSF006113 1 120 1.7E-52 T 21-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein VFU_RS08665 9b023071dda1cfd2c2ab0543defd1f1d 121 Gene3D G3DSA:3.30.479.10 1 119 5.2E-40 T 21-04-2016 VFU_RS08665 9b023071dda1cfd2c2ab0543defd1f1d 121 SUPERFAMILY SSF55620 1 118 1.33E-40 T 21-04-2016 VFU_RS08665 9b023071dda1cfd2c2ab0543defd1f1d 121 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 4 96 1.5E-32 T 21-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein VFU_RS08665 9b023071dda1cfd2c2ab0543defd1f1d 121 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 4 119 2.3E-34 T 21-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein VFU_RS22455 8f4e78fec6caa228c981c54f02c2d79c 319 Pfam PF00367 phosphotransferase system, EIIB 2 20 5.2E-6 T 21-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VFU_RS22455 8f4e78fec6caa228c981c54f02c2d79c 319 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 7 89 5.1E-24 T 21-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VFU_RS22455 8f4e78fec6caa228c981c54f02c2d79c 319 PANTHER PTHR30175:SF7 1 317 6.0E-150 T 21-04-2016 VFU_RS22455 8f4e78fec6caa228c981c54f02c2d79c 319 Pfam PF02378 Phosphotransferase system, EIIC 89 316 9.2E-40 T 21-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VFU_RS22455 8f4e78fec6caa228c981c54f02c2d79c 319 SUPERFAMILY SSF55604 2 61 9.55E-14 T 21-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VFU_RS22455 8f4e78fec6caa228c981c54f02c2d79c 319 Gene3D G3DSA:3.30.1360.60 2 62 3.0E-19 T 21-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VFU_RS22455 8f4e78fec6caa228c981c54f02c2d79c 319 PANTHER PTHR30175 1 317 6.0E-150 T 21-04-2016 VFU_RS10030 f012013e1247b4c57e18c834e6c731e6 272 PANTHER PTHR11995 31 204 1.8E-93 T 21-04-2016 VFU_RS10030 f012013e1247b4c57e18c834e6c731e6 272 Gene3D G3DSA:3.40.50.700 38 161 5.4E-29 T 21-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 VFU_RS10030 f012013e1247b4c57e18c834e6c731e6 272 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 132 148 - T 21-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 VFU_RS10030 f012013e1247b4c57e18c834e6c731e6 272 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 49 157 7.4E-25 T 21-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 VFU_RS10030 f012013e1247b4c57e18c834e6c731e6 272 SUPERFAMILY SSF56770 37 171 1.96E-51 T 21-04-2016 VFU_RS10030 f012013e1247b4c57e18c834e6c731e6 272 PANTHER PTHR11995:SF20 31 204 1.8E-93 T 21-04-2016 VFU_RS04975 71f5208bc45af737f4f222139dc43d08 452 SUPERFAMILY SSF51338 371 423 3.7E-16 T 21-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VFU_RS04975 71f5208bc45af737f4f222139dc43d08 452 SUPERFAMILY SSF51338 2 52 3.7E-16 T 21-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VFU_RS04975 71f5208bc45af737f4f222139dc43d08 452 Gene3D G3DSA:3.20.20.140 62 388 2.8E-85 T 21-04-2016 VFU_RS04975 71f5208bc45af737f4f222139dc43d08 452 Pfam PF01979 Amidohydrolase family 49 420 2.1E-48 T 21-04-2016 IPR006680 Amidohydrolase-related GO:0016787 VFU_RS04975 71f5208bc45af737f4f222139dc43d08 452 SUPERFAMILY SSF51556 52 370 1.45E-83 T 21-04-2016 IPR032466 Metal-dependent hydrolase VFU_RS04975 71f5208bc45af737f4f222139dc43d08 452 PANTHER PTHR11271:SF37 20 445 1.3E-92 T 21-04-2016 VFU_RS04975 71f5208bc45af737f4f222139dc43d08 452 PANTHER PTHR11271 20 445 1.3E-92 T 21-04-2016 VFU_RS04975 71f5208bc45af737f4f222139dc43d08 452 Gene3D G3DSA:2.30.40.10 4 61 2.5E-14 T 21-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VFU_RS12595 1f9613b954c14e350ef424587adb63b4 504 SUPERFAMILY SSF56235 2 256 9.44E-71 T 21-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VFU_RS12595 1f9613b954c14e350ef424587adb63b4 504 PIRSF PIRSF000485 1 480 2.2E-168 T 21-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 VFU_RS12595 1f9613b954c14e350ef424587adb63b4 504 PANTHER PTHR11907 1 477 7.9E-256 T 21-04-2016 VFU_RS12595 1f9613b954c14e350ef424587adb63b4 504 SUPERFAMILY SSF53271 249 482 1.27E-70 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like VFU_RS12595 1f9613b954c14e350ef424587adb63b4 504 Gene3D G3DSA:3.60.20.10 2 257 1.4E-63 T 21-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VFU_RS12595 1f9613b954c14e350ef424587adb63b4 504 PANTHER PTHR11907:SF0 1 477 7.9E-256 T 21-04-2016 VFU_RS12595 1f9613b954c14e350ef424587adb63b4 504 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 463 3.0E-165 T 21-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 VFU_RS12595 1f9613b954c14e350ef424587adb63b4 504 Pfam PF00156 Phosphoribosyl transferase domain 292 389 1.1E-6 T 21-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 VFU_RS12595 1f9613b954c14e350ef424587adb63b4 504 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 465 44.42 T 21-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 VFU_RS12595 1f9613b954c14e350ef424587adb63b4 504 Pfam PF13522 Glutamine amidotransferase domain 64 207 1.4E-17 T 21-04-2016 VFU_RS12595 1f9613b954c14e350ef424587adb63b4 504 Gene3D G3DSA:3.40.50.2020 270 443 6.8E-47 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like VFU_RS05225 3aeaf93fb46a59ab06f5ef4a8bdb33cc 324 Pfam PF02769 AIR synthase related protein, C-terminal domain 149 299 8.1E-9 T 21-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VFU_RS05225 3aeaf93fb46a59ab06f5ef4a8bdb33cc 324 PIRSF PIRSF005303 1 320 1.1E-82 T 21-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 VFU_RS05225 3aeaf93fb46a59ab06f5ef4a8bdb33cc 324 SUPERFAMILY SSF56042 142 302 1.2E-34 T 21-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VFU_RS05225 3aeaf93fb46a59ab06f5ef4a8bdb33cc 324 PANTHER PTHR30270:SF0 1 322 2.4E-130 T 21-04-2016 VFU_RS05225 3aeaf93fb46a59ab06f5ef4a8bdb33cc 324 Gene3D G3DSA:3.90.650.10 144 320 3.0E-46 T 21-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VFU_RS05225 3aeaf93fb46a59ab06f5ef4a8bdb33cc 324 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 2 317 28.459 T 21-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 VFU_RS05225 3aeaf93fb46a59ab06f5ef4a8bdb33cc 324 PANTHER PTHR30270 1 322 2.4E-130 T 21-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 VFU_RS05225 3aeaf93fb46a59ab06f5ef4a8bdb33cc 324 Gene3D G3DSA:3.30.1330.10 3 140 6.2E-43 T 21-04-2016 IPR016188 PurM-like, N-terminal domain VFU_RS05225 3aeaf93fb46a59ab06f5ef4a8bdb33cc 324 Pfam PF00586 AIR synthase related protein, N-terminal domain 28 137 2.1E-21 T 21-04-2016 IPR016188 PurM-like, N-terminal domain VFU_RS05225 3aeaf93fb46a59ab06f5ef4a8bdb33cc 324 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 3 320 8.5E-103 T 21-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 VFU_RS05225 3aeaf93fb46a59ab06f5ef4a8bdb33cc 324 SUPERFAMILY SSF55326 3 137 3.66E-34 T 21-04-2016 VFU_RS02505 bb38d0e978f37427191ccdccc5c519dd 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 311 329 1.1E-11 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS02505 bb38d0e978f37427191ccdccc5c519dd 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 282 296 1.1E-11 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS02505 bb38d0e978f37427191ccdccc5c519dd 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 347 1.1E-11 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS02505 bb38d0e978f37427191ccdccc5c519dd 348 SMART SM00388 129 194 2.0E-13 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS02505 bb38d0e978f37427191ccdccc5c519dd 348 PANTHER PTHR24423:SF488 2 266 1.4E-165 T 21-04-2016 VFU_RS02505 bb38d0e978f37427191ccdccc5c519dd 348 PANTHER PTHR24423:SF488 282 348 1.4E-165 T 21-04-2016 VFU_RS02505 bb38d0e978f37427191ccdccc5c519dd 348 SUPERFAMILY SSF55785 4 97 3.05E-10 T 21-04-2016 IPR000014 PAS domain VFU_RS02505 bb38d0e978f37427191ccdccc5c519dd 348 SUPERFAMILY SSF47384 125 190 1.26E-12 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS02505 bb38d0e978f37427191ccdccc5c519dd 348 Pfam PF00512 His Kinase A (phospho-acceptor) domain 133 189 9.6E-15 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS02505 bb38d0e978f37427191ccdccc5c519dd 348 SUPERFAMILY SSF55874 198 347 2.23E-36 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS02505 bb38d0e978f37427191ccdccc5c519dd 348 SMART SM00091 4 72 1.2E-6 T 21-04-2016 IPR000014 PAS domain VFU_RS02505 bb38d0e978f37427191ccdccc5c519dd 348 PANTHER PTHR24423 282 348 1.4E-165 T 21-04-2016 VFU_RS02505 bb38d0e978f37427191ccdccc5c519dd 348 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 7 121 1.2E-6 T 21-04-2016 IPR000014 PAS domain VFU_RS02505 bb38d0e978f37427191ccdccc5c519dd 348 Gene3D G3DSA:3.30.565.10 196 348 1.6E-36 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS02505 bb38d0e978f37427191ccdccc5c519dd 348 Gene3D G3DSA:1.10.287.130 124 186 9.4E-12 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS02505 bb38d0e978f37427191ccdccc5c519dd 348 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 347 2.2E-18 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS02505 bb38d0e978f37427191ccdccc5c519dd 348 PANTHER PTHR24423 2 266 1.4E-165 T 21-04-2016 VFU_RS02505 bb38d0e978f37427191ccdccc5c519dd 348 Pfam PF00989 PAS fold 7 111 9.1E-17 T 21-04-2016 IPR013767 PAS fold GO:0006355 VFU_RS02505 bb38d0e978f37427191ccdccc5c519dd 348 Gene3D G3DSA:3.30.450.20 3 111 7.1E-28 T 21-04-2016 VFU_RS02505 bb38d0e978f37427191ccdccc5c519dd 348 SMART SM00387 233 348 1.4E-29 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS11100 553d3606862329c55072d2a53d780a27 917 Pfam PF05193 Peptidase M16 inactive domain 197 370 1.4E-16 T 21-04-2016 IPR007863 Peptidase M16, C-terminal VFU_RS11100 553d3606862329c55072d2a53d780a27 917 Pfam PF05193 Peptidase M16 inactive domain 668 841 2.6E-10 T 21-04-2016 IPR007863 Peptidase M16, C-terminal VFU_RS11100 553d3606862329c55072d2a53d780a27 917 PANTHER PTHR11851 36 789 5.2E-112 T 21-04-2016 VFU_RS11100 553d3606862329c55072d2a53d780a27 917 SUPERFAMILY SSF63411 264 447 1.92E-6 T 21-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VFU_RS11100 553d3606862329c55072d2a53d780a27 917 SUPERFAMILY SSF63411 21 247 4.71E-42 T 21-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VFU_RS11100 553d3606862329c55072d2a53d780a27 917 Gene3D G3DSA:3.30.830.10 495 721 1.8E-17 T 21-04-2016 IPR011237 Peptidase M16 domain GO:0046872 VFU_RS11100 553d3606862329c55072d2a53d780a27 917 Gene3D G3DSA:3.30.830.10 23 248 1.8E-45 T 21-04-2016 IPR011237 Peptidase M16 domain GO:0046872 VFU_RS11100 553d3606862329c55072d2a53d780a27 917 Pfam PF00675 Insulinase (Peptidase family M16) 49 168 1.1E-25 T 21-04-2016 IPR011765 Peptidase M16, N-terminal VFU_RS11100 553d3606862329c55072d2a53d780a27 917 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 62 85 - T 21-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 VFU_RS11100 553d3606862329c55072d2a53d780a27 917 SUPERFAMILY SSF63411 737 904 1.64E-13 T 21-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VFU_RS11100 553d3606862329c55072d2a53d780a27 917 PANTHER PTHR11851:SF124 36 789 5.2E-112 T 21-04-2016 VFU_RS11100 553d3606862329c55072d2a53d780a27 917 Gene3D G3DSA:3.30.830.10 772 903 2.2E-8 T 21-04-2016 IPR011237 Peptidase M16 domain GO:0046872 VFU_RS11100 553d3606862329c55072d2a53d780a27 917 SUPERFAMILY SSF63411 496 711 1.75E-22 T 21-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VFU_RS05240 22be115f9a794a1c65996a6857e86131 874 PANTHER PTHR13734:SF45 97 688 5.6E-150 T 21-04-2016 VFU_RS05240 22be115f9a794a1c65996a6857e86131 874 SUPERFAMILY SSF55021 689 750 9.92E-9 T 21-04-2016 VFU_RS05240 22be115f9a794a1c65996a6857e86131 874 SUPERFAMILY SSF81301 39 172 6.54E-20 T 21-04-2016 VFU_RS05240 22be115f9a794a1c65996a6857e86131 874 SMART SM00471 447 594 5.0E-10 T 21-04-2016 IPR003607 HD/PDEase domain VFU_RS05240 22be115f9a794a1c65996a6857e86131 874 Pfam PF01966 HD domain 452 584 2.7E-13 T 21-04-2016 IPR006674 HD domain VFU_RS05240 22be115f9a794a1c65996a6857e86131 874 Gene3D G3DSA:3.30.460.10 71 161 1.8E-9 T 21-04-2016 VFU_RS05240 22be115f9a794a1c65996a6857e86131 874 Pfam PF01909 Nucleotidyltransferase domain 57 114 2.0E-7 T 21-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 VFU_RS05240 22be115f9a794a1c65996a6857e86131 874 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 874 339.954 T 21-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 VFU_RS05240 22be115f9a794a1c65996a6857e86131 874 PIRSF PIRSF006288 7 874 0.0 T 21-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 VFU_RS05240 22be115f9a794a1c65996a6857e86131 874 PANTHER PTHR13734 97 688 5.6E-150 T 21-04-2016 VFU_RS05240 22be115f9a794a1c65996a6857e86131 874 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 28 868 0.0 T 21-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 VFU_RS05240 22be115f9a794a1c65996a6857e86131 874 Pfam PF08335 GlnD PII-uridylyltransferase 176 314 2.6E-36 T 21-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 VFU_RS05240 22be115f9a794a1c65996a6857e86131 874 Gene3D G3DSA:3.30.70.260 692 751 1.3E-4 T 21-04-2016 VFU_RS05240 22be115f9a794a1c65996a6857e86131 874 Gene3D G3DSA:3.30.70.260 796 856 4.2E-8 T 21-04-2016 VFU_RS05240 22be115f9a794a1c65996a6857e86131 874 SUPERFAMILY SSF55021 796 854 1.18E-7 T 21-04-2016 VFU_RS05240 22be115f9a794a1c65996a6857e86131 874 SUPERFAMILY SSF109604 418 556 1.69E-13 T 21-04-2016 VFU_RS05240 22be115f9a794a1c65996a6857e86131 874 Gene3D G3DSA:1.10.3210.10 421 610 1.2E-25 T 21-04-2016 IPR006674 HD domain VFU_RS05240 22be115f9a794a1c65996a6857e86131 874 SUPERFAMILY SSF81593 186 310 5.18E-10 T 21-04-2016 VFU_RS07315 e7f4ba3cead52e25949b245593923656 974 Pfam PF13745 HxxPF-repeated domain 851 945 1.2E-6 T 21-04-2016 VFU_RS07315 e7f4ba3cead52e25949b245593923656 974 PANTHER PTHR24095:SF137 435 882 2.7E-55 T 21-04-2016 VFU_RS07315 e7f4ba3cead52e25949b245593923656 974 PANTHER PTHR24095:SF137 901 972 2.7E-55 T 21-04-2016 VFU_RS07315 e7f4ba3cead52e25949b245593923656 974 ProSitePatterns PS00012 Phosphopantetheine attachment site. 469 484 - T 21-04-2016 IPR006162 Phosphopantetheine attachment site VFU_RS07315 e7f4ba3cead52e25949b245593923656 974 SUPERFAMILY SSF47336 441 509 1.83E-12 T 21-04-2016 IPR009081 Phosphopantetheine binding ACP domain VFU_RS07315 e7f4ba3cead52e25949b245593923656 974 SUPERFAMILY SSF52777 22 170 8.78E-10 T 21-04-2016 VFU_RS07315 e7f4ba3cead52e25949b245593923656 974 Pfam PF00668 Condensation domain 27 251 3.8E-7 T 21-04-2016 IPR001242 Condensation domain VFU_RS07315 e7f4ba3cead52e25949b245593923656 974 Pfam PF00668 Condensation domain 529 820 1.0E-40 T 21-04-2016 IPR001242 Condensation domain VFU_RS07315 e7f4ba3cead52e25949b245593923656 974 SUPERFAMILY SSF52777 715 960 4.78E-35 T 21-04-2016 VFU_RS07315 e7f4ba3cead52e25949b245593923656 974 Pfam PF00550 Phosphopantetheine attachment site 442 509 1.4E-9 T 21-04-2016 IPR009081 Phosphopantetheine binding ACP domain VFU_RS07315 e7f4ba3cead52e25949b245593923656 974 PANTHER PTHR24095 435 882 2.7E-55 T 21-04-2016 VFU_RS07315 e7f4ba3cead52e25949b245593923656 974 PANTHER PTHR24095 901 972 2.7E-55 T 21-04-2016 VFU_RS07315 e7f4ba3cead52e25949b245593923656 974 Gene3D G3DSA:1.10.1200.10 438 513 2.7E-16 T 21-04-2016 IPR009081 Phosphopantetheine binding ACP domain VFU_RS07315 e7f4ba3cead52e25949b245593923656 974 SUPERFAMILY SSF52777 534 710 7.41E-36 T 21-04-2016 VFU_RS07315 e7f4ba3cead52e25949b245593923656 974 SMART SM00823 Phosphopantetheine attachment site 445 514 0.0054 T 21-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 VFU_RS13655 d3f415c38793198947dfacac34d025dd 504 SUPERFAMILY SSF109604 315 503 2.39E-45 T 21-04-2016 VFU_RS13655 d3f415c38793198947dfacac34d025dd 504 Gene3D G3DSA:3.30.420.40 10 133 3.4E-43 T 21-04-2016 VFU_RS13655 d3f415c38793198947dfacac34d025dd 504 Gene3D G3DSA:3.30.420.150 134 311 5.9E-55 T 21-04-2016 VFU_RS13655 d3f415c38793198947dfacac34d025dd 504 PANTHER PTHR30005 1 504 1.2E-224 T 21-04-2016 VFU_RS13655 d3f415c38793198947dfacac34d025dd 504 SUPERFAMILY SSF53067 15 135 6.48E-36 T 21-04-2016 VFU_RS13655 d3f415c38793198947dfacac34d025dd 504 PIRSF PIRSF001267 5 504 3.8E-202 T 21-04-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 VFU_RS13655 d3f415c38793198947dfacac34d025dd 504 PANTHER PTHR30005:SF4 1 504 1.2E-224 T 21-04-2016 VFU_RS13655 d3f415c38793198947dfacac34d025dd 504 Pfam PF02541 Ppx/GppA phosphatase family 28 310 6.0E-85 T 21-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 VFU_RS13655 d3f415c38793198947dfacac34d025dd 504 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 14 308 2.5E-103 T 21-04-2016 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 VFU_RS13655 d3f415c38793198947dfacac34d025dd 504 SUPERFAMILY SSF53067 140 311 9.71E-47 T 21-04-2016 VFU_RS11385 dffb441278a6239b444152ffeef0eb68 357 SUPERFAMILY SSF74653 263 357 4.9E-14 T 21-04-2016 VFU_RS11385 dffb441278a6239b444152ffeef0eb68 357 TIGRFAM TIGR02794 tolA_full: protein TolA 12 356 1.6E-83 T 21-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 VFU_RS11385 dffb441278a6239b444152ffeef0eb68 357 Gene3D G3DSA:3.30.1150.10 253 356 5.5E-20 T 21-04-2016 VFU_RS11385 dffb441278a6239b444152ffeef0eb68 357 Pfam PF06519 TolA C-terminal 254 354 2.8E-29 T 21-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 VFU_RS10260 32fe25102cc65e18ee615be7f862c354 686 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 162 660 5.4E-70 T 21-04-2016 IPR001757 P-type ATPase GO:0016021 VFU_RS10260 32fe25102cc65e18ee615be7f862c354 686 Pfam PF00702 haloacid dehalogenase-like hydrolase 375 595 5.5E-37 T 21-04-2016 VFU_RS10260 32fe25102cc65e18ee615be7f862c354 686 Pfam PF00122 E1-E2 ATPase 162 370 6.9E-45 T 21-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 VFU_RS10260 32fe25102cc65e18ee615be7f862c354 686 SUPERFAMILY SSF81653 192 287 7.98E-22 T 21-04-2016 VFU_RS10260 32fe25102cc65e18ee615be7f862c354 686 PANTHER PTHR24093 31 685 7.0E-115 T 21-04-2016 VFU_RS10260 32fe25102cc65e18ee615be7f862c354 686 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 137 683 3.1E-147 T 21-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 VFU_RS10260 32fe25102cc65e18ee615be7f862c354 686 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 505 516 7.0E-27 T 21-04-2016 VFU_RS10260 32fe25102cc65e18ee615be7f862c354 686 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 604 616 7.0E-27 T 21-04-2016 VFU_RS10260 32fe25102cc65e18ee615be7f862c354 686 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 237 251 7.0E-27 T 21-04-2016 VFU_RS10260 32fe25102cc65e18ee615be7f862c354 686 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 581 600 7.0E-27 T 21-04-2016 VFU_RS10260 32fe25102cc65e18ee615be7f862c354 686 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 379 393 7.0E-27 T 21-04-2016 VFU_RS10260 32fe25102cc65e18ee615be7f862c354 686 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 528 538 7.0E-27 T 21-04-2016 VFU_RS10260 32fe25102cc65e18ee615be7f862c354 686 ProSitePatterns PS01229 Hypothetical cof family signature 2. 581 603 - T 21-04-2016 VFU_RS10260 32fe25102cc65e18ee615be7f862c354 686 Gene3D G3DSA:3.40.1110.10 394 507 1.4E-14 T 21-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 VFU_RS10260 32fe25102cc65e18ee615be7f862c354 686 Gene3D G3DSA:3.40.50.1000 508 634 3.1E-44 T 21-04-2016 IPR023214 HAD-like domain VFU_RS10260 32fe25102cc65e18ee615be7f862c354 686 Gene3D G3DSA:3.40.50.1000 354 393 3.1E-44 T 21-04-2016 IPR023214 HAD-like domain VFU_RS10260 32fe25102cc65e18ee615be7f862c354 686 PANTHER PTHR24093:SF50 31 685 7.0E-115 T 21-04-2016 VFU_RS10260 32fe25102cc65e18ee615be7f862c354 686 SUPERFAMILY SSF56784 477 677 6.87E-51 T 21-04-2016 IPR023214 HAD-like domain VFU_RS10260 32fe25102cc65e18ee615be7f862c354 686 SUPERFAMILY SSF56784 378 397 6.87E-51 T 21-04-2016 IPR023214 HAD-like domain VFU_RS10260 32fe25102cc65e18ee615be7f862c354 686 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 381 387 - T 21-04-2016 IPR018303 P-type ATPase, phosphorylation site VFU_RS10260 32fe25102cc65e18ee615be7f862c354 686 Gene3D G3DSA:2.70.150.10 186 287 4.1E-25 T 21-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 VFU_RS07835 e48ecbd23b4e7187379407d151e3dbd7 203 SUPERFAMILY SSF52317 4 202 9.77E-54 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like VFU_RS07835 e48ecbd23b4e7187379407d151e3dbd7 203 Gene3D G3DSA:3.40.50.880 2 203 1.8E-70 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like VFU_RS07835 e48ecbd23b4e7187379407d151e3dbd7 203 PANTHER PTHR21235 5 202 3.7E-84 T 21-04-2016 VFU_RS07835 e48ecbd23b4e7187379407d151e3dbd7 203 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 4 203 34.262 T 21-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 VFU_RS07835 e48ecbd23b4e7187379407d151e3dbd7 203 PIRSF PIRSF000495 3 203 2.1E-65 T 21-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 VFU_RS07835 e48ecbd23b4e7187379407d151e3dbd7 203 PANTHER PTHR21235:SF1 5 202 3.7E-84 T 21-04-2016 VFU_RS07835 e48ecbd23b4e7187379407d151e3dbd7 203 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 5 202 1.8E-68 T 21-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 VFU_RS07835 e48ecbd23b4e7187379407d151e3dbd7 203 Pfam PF00117 Glutamine amidotransferase class-I 7 201 1.9E-18 T 21-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 VFU_RS07590 1c6a68864e37795d599bb35b508c4bd9 425 PANTHER PTHR39084 1 425 1.1E-64 T 21-04-2016 VFU_RS07590 1c6a68864e37795d599bb35b508c4bd9 425 Pfam PF13194 Domain of unknown function (DUF4010) 189 398 2.6E-64 T 21-04-2016 IPR025105 Domain of unknown function DUF4010 VFU_RS07590 1c6a68864e37795d599bb35b508c4bd9 425 Pfam PF02308 MgtC family 16 141 9.7E-20 T 21-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VFU_RS06760 b9dab55e3025be0c67bbac7a68cbfbf0 398 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 320 396 8.0E-17 T 21-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VFU_RS06760 b9dab55e3025be0c67bbac7a68cbfbf0 398 Pfam PF00460 Flagella basal body rod protein 3 33 2.9E-9 T 21-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VFU_RS06760 b9dab55e3025be0c67bbac7a68cbfbf0 398 PANTHER PTHR30435:SF1 276 398 3.8E-76 T 21-04-2016 VFU_RS06760 b9dab55e3025be0c67bbac7a68cbfbf0 398 PANTHER PTHR30435:SF1 1 117 3.8E-76 T 21-04-2016 VFU_RS06760 b9dab55e3025be0c67bbac7a68cbfbf0 398 SUPERFAMILY SSF117143 73 359 2.88E-80 T 21-04-2016 VFU_RS06760 b9dab55e3025be0c67bbac7a68cbfbf0 398 Pfam PF07559 Flagellar basal body protein FlaE 172 279 7.5E-24 T 21-04-2016 IPR011491 Flagellar hook protein FlgE VFU_RS06760 b9dab55e3025be0c67bbac7a68cbfbf0 398 PANTHER PTHR30435 276 398 3.8E-76 T 21-04-2016 VFU_RS06760 b9dab55e3025be0c67bbac7a68cbfbf0 398 PANTHER PTHR30435 1 117 3.8E-76 T 21-04-2016 VFU_RS06760 b9dab55e3025be0c67bbac7a68cbfbf0 398 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 380 1.9E-95 T 21-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G VFU_RS06965 7429ada8c6f31f9b956833fb0ccee45c 122 PRINTS PR00956 Flagellar motor switch protein FliN signature 89 104 3.5E-18 T 21-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VFU_RS06965 7429ada8c6f31f9b956833fb0ccee45c 122 PRINTS PR00956 Flagellar motor switch protein FliN signature 60 76 3.5E-18 T 21-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VFU_RS06965 7429ada8c6f31f9b956833fb0ccee45c 122 PRINTS PR00956 Flagellar motor switch protein FliN signature 43 59 3.5E-18 T 21-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VFU_RS06965 7429ada8c6f31f9b956833fb0ccee45c 122 PRINTS PR00956 Flagellar motor switch protein FliN signature 76 89 3.5E-18 T 21-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VFU_RS06965 7429ada8c6f31f9b956833fb0ccee45c 122 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 45 113 2.3E-19 T 21-04-2016 IPR001543 Surface presentation of antigen (SpoA) VFU_RS06965 7429ada8c6f31f9b956833fb0ccee45c 122 Gene3D G3DSA:2.30.330.10 35 115 9.7E-26 T 21-04-2016 VFU_RS06965 7429ada8c6f31f9b956833fb0ccee45c 122 PANTHER PTHR30034 28 112 1.4E-14 T 21-04-2016 VFU_RS06965 7429ada8c6f31f9b956833fb0ccee45c 122 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 41 115 1.2E-28 T 21-04-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 VFU_RS06965 7429ada8c6f31f9b956833fb0ccee45c 122 SUPERFAMILY SSF101801 40 115 1.83E-19 T 21-04-2016 IPR001543 Surface presentation of antigen (SpoA) VFU_RS06965 7429ada8c6f31f9b956833fb0ccee45c 122 PANTHER PTHR30034:SF1 28 112 1.4E-14 T 21-04-2016 VFU_RS08710 3ba3d44b39830a563c7ebba028bc4dae 180 Gene3D G3DSA:3.90.1520.10 1 176 1.7E-55 T 21-04-2016 VFU_RS08710 3ba3d44b39830a563c7ebba028bc4dae 180 SUPERFAMILY SSF111126 1 176 1.52E-47 T 21-04-2016 IPR024096 NO signalling/Golgi transport ligand-binding domain VFU_RS08710 3ba3d44b39830a563c7ebba028bc4dae 180 Pfam PF07700 Haem-NO-binding 2 161 4.4E-40 T 21-04-2016 IPR011644 Heme-NO binding GO:0020037 KEGG: 00230+4.6.1.2 VFU_RS12840 b58d6c4a990cee26af2b7fa7295b832d 858 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 404 1.3E-79 T 21-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 VFU_RS12840 b58d6c4a990cee26af2b7fa7295b832d 858 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 418 571 2.3E-8 T 21-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VFU_RS12840 b58d6c4a990cee26af2b7fa7295b832d 858 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 608 650 8.1E-8 T 21-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VFU_RS12840 b58d6c4a990cee26af2b7fa7295b832d 858 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 172 8.9E-27 T 21-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VFU_RS12840 b58d6c4a990cee26af2b7fa7295b832d 858 SUPERFAMILY SSF52374 4 226 2.41E-147 T 21-04-2016 VFU_RS12840 b58d6c4a990cee26af2b7fa7295b832d 858 SUPERFAMILY SSF52374 416 667 2.41E-147 T 21-04-2016 VFU_RS12840 b58d6c4a990cee26af2b7fa7295b832d 858 Gene3D G3DSA:1.10.730.10 647 793 3.0E-45 T 21-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VFU_RS12840 b58d6c4a990cee26af2b7fa7295b832d 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 6.8E-52 T 21-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VFU_RS12840 b58d6c4a990cee26af2b7fa7295b832d 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 6.8E-52 T 21-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VFU_RS12840 b58d6c4a990cee26af2b7fa7295b832d 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 556 566 6.8E-52 T 21-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VFU_RS12840 b58d6c4a990cee26af2b7fa7295b832d 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 6.8E-52 T 21-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VFU_RS12840 b58d6c4a990cee26af2b7fa7295b832d 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 523 545 6.8E-52 T 21-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VFU_RS12840 b58d6c4a990cee26af2b7fa7295b832d 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 6.8E-52 T 21-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VFU_RS12840 b58d6c4a990cee26af2b7fa7295b832d 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 6.8E-52 T 21-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VFU_RS12840 b58d6c4a990cee26af2b7fa7295b832d 858 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 857 0.0 T 21-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VFU_RS12840 b58d6c4a990cee26af2b7fa7295b832d 858 PANTHER PTHR11946 240 570 0.0 T 21-04-2016 VFU_RS12840 b58d6c4a990cee26af2b7fa7295b832d 858 PANTHER PTHR11946 613 858 0.0 T 21-04-2016 VFU_RS12840 b58d6c4a990cee26af2b7fa7295b832d 858 PANTHER PTHR11946 1 206 0.0 T 21-04-2016 VFU_RS12840 b58d6c4a990cee26af2b7fa7295b832d 858 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 21-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VFU_RS12840 b58d6c4a990cee26af2b7fa7295b832d 858 Gene3D G3DSA:3.40.50.620 4 222 1.2E-156 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VFU_RS12840 b58d6c4a990cee26af2b7fa7295b832d 858 Gene3D G3DSA:3.40.50.620 617 646 1.2E-156 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VFU_RS12840 b58d6c4a990cee26af2b7fa7295b832d 858 Gene3D G3DSA:3.40.50.620 425 572 1.2E-156 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VFU_RS12840 b58d6c4a990cee26af2b7fa7295b832d 858 PANTHER PTHR11946:SF7 240 570 0.0 T 21-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VFU_RS12840 b58d6c4a990cee26af2b7fa7295b832d 858 PANTHER PTHR11946:SF7 613 858 0.0 T 21-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VFU_RS12840 b58d6c4a990cee26af2b7fa7295b832d 858 PANTHER PTHR11946:SF7 1 206 0.0 T 21-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VFU_RS12840 b58d6c4a990cee26af2b7fa7295b832d 858 SUPERFAMILY SSF50677 226 415 2.3E-57 T 21-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 VFU_RS12840 b58d6c4a990cee26af2b7fa7295b832d 858 Gene3D G3DSA:3.90.740.10 223 424 4.1E-59 T 21-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 VFU_RS12840 b58d6c4a990cee26af2b7fa7295b832d 858 SUPERFAMILY SSF47323 661 857 1.64E-34 T 21-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VFU_RS12840 b58d6c4a990cee26af2b7fa7295b832d 858 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 857 23.382 T 21-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VFU_RS12840 b58d6c4a990cee26af2b7fa7295b832d 858 Pfam PF08264 Anticodon-binding domain of tRNA 700 821 1.2E-14 T 21-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 VFU_RS14230 2538f0ae28459d8fa6f9f55768a85564 352 PANTHER PTHR21015 1 348 5.7E-122 T 21-04-2016 VFU_RS14230 2538f0ae28459d8fa6f9f55768a85564 352 Gene3D G3DSA:3.40.50.2000 246 326 4.2E-8 T 21-04-2016 VFU_RS14230 2538f0ae28459d8fa6f9f55768a85564 352 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 1 345 33.58 T 21-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VFU_RS14230 2538f0ae28459d8fa6f9f55768a85564 352 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 2 137 8.3E-47 T 21-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VFU_RS14230 2538f0ae28459d8fa6f9f55768a85564 352 Gene3D G3DSA:3.40.50.2000 1 188 1.6E-70 T 21-04-2016 VFU_RS14230 2538f0ae28459d8fa6f9f55768a85564 352 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 177 330 1.5E-38 T 21-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VFU_RS14230 2538f0ae28459d8fa6f9f55768a85564 352 PANTHER PTHR21015:SF22 1 348 5.7E-122 T 21-04-2016 VFU_RS14230 2538f0ae28459d8fa6f9f55768a85564 352 SUPERFAMILY SSF53756 1 345 5.69E-124 T 21-04-2016 VFU_RS14230 2538f0ae28459d8fa6f9f55768a85564 352 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 341 4.8E-115 T 21-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VFU_RS07250 482ba512628f82bc201b01132fcc7747 295 Gene3D G3DSA:3.40.50.850 1 213 9.0E-59 T 21-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 VFU_RS07250 482ba512628f82bc201b01132fcc7747 295 SUPERFAMILY SSF52499 1 208 3.01E-58 T 21-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 VFU_RS07250 482ba512628f82bc201b01132fcc7747 295 PANTHER PTHR11080:SF4 6 264 4.4E-102 T 21-04-2016 VFU_RS07250 482ba512628f82bc201b01132fcc7747 295 Gene3D G3DSA:1.10.1200.10 214 283 5.6E-8 T 21-04-2016 IPR009081 Phosphopantetheine binding ACP domain VFU_RS07250 482ba512628f82bc201b01132fcc7747 295 PRINTS PR01398 Isochorismatase signature 80 99 6.8E-47 T 21-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 VFU_RS07250 482ba512628f82bc201b01132fcc7747 295 PRINTS PR01398 Isochorismatase signature 165 183 6.8E-47 T 21-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 VFU_RS07250 482ba512628f82bc201b01132fcc7747 295 PRINTS PR01398 Isochorismatase signature 183 200 6.8E-47 T 21-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 VFU_RS07250 482ba512628f82bc201b01132fcc7747 295 PRINTS PR01398 Isochorismatase signature 63 80 6.8E-47 T 21-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 VFU_RS07250 482ba512628f82bc201b01132fcc7747 295 PRINTS PR01398 Isochorismatase signature 109 131 6.8E-47 T 21-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 VFU_RS07250 482ba512628f82bc201b01132fcc7747 295 PRINTS PR01398 Isochorismatase signature 2 14 6.8E-47 T 21-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 VFU_RS07250 482ba512628f82bc201b01132fcc7747 295 PANTHER PTHR11080 6 264 4.4E-102 T 21-04-2016 VFU_RS07250 482ba512628f82bc201b01132fcc7747 295 PIRSF PIRSF001111 1 289 5.4E-122 T 21-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 VFU_RS07250 482ba512628f82bc201b01132fcc7747 295 Pfam PF00857 Isochorismatase family 32 201 4.0E-34 T 21-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 VFU_RS07250 482ba512628f82bc201b01132fcc7747 295 Pfam PF00550 Phosphopantetheine attachment site 222 276 2.3E-5 T 21-04-2016 IPR009081 Phosphopantetheine binding ACP domain VFU_RS07250 482ba512628f82bc201b01132fcc7747 295 SUPERFAMILY SSF47336 213 288 3.66E-8 T 21-04-2016 IPR009081 Phosphopantetheine binding ACP domain VFU_RS01185 2ee3bb34f061c55bbc64cd46a33ada35 287 Hamap MF_00697 UPF0276 protein . 10 282 44.285 T 21-04-2016 IPR007801 Uncharacterised protein family UPF0276 VFU_RS01185 2ee3bb34f061c55bbc64cd46a33ada35 287 PANTHER PTHR42194:SF1 4 286 7.3E-62 T 21-04-2016 VFU_RS01185 2ee3bb34f061c55bbc64cd46a33ada35 287 Gene3D G3DSA:3.20.20.150 8 278 1.5E-100 T 21-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain VFU_RS01185 2ee3bb34f061c55bbc64cd46a33ada35 287 Pfam PF05114 Protein of unknown function (DUF692) 9 273 7.5E-106 T 21-04-2016 IPR007801 Uncharacterised protein family UPF0276 VFU_RS01185 2ee3bb34f061c55bbc64cd46a33ada35 287 PANTHER PTHR42194 4 286 7.3E-62 T 21-04-2016 VFU_RS01185 2ee3bb34f061c55bbc64cd46a33ada35 287 SUPERFAMILY SSF51658 29 257 3.93E-10 T 21-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain VFU_RS13565 6507878b154491dda0ca40b3e759dac2 315 SUPERFAMILY SSF82866 74 293 5.49E-40 T 21-04-2016 VFU_RS13565 6507878b154491dda0ca40b3e759dac2 315 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 39 285 3.5E-86 T 21-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 VFU_RS13565 6507878b154491dda0ca40b3e759dac2 315 PANTHER PTHR30081 3 312 1.2E-90 T 21-04-2016 VFU_RS13565 6507878b154491dda0ca40b3e759dac2 315 Pfam PF02355 Protein export membrane protein 111 292 2.8E-70 T 21-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VFU_RS13565 6507878b154491dda0ca40b3e759dac2 315 Pfam PF07549 SecD/SecF GG Motif 35 60 8.5E-11 T 21-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VFU_RS13565 6507878b154491dda0ca40b3e759dac2 315 PRINTS PR01755 Bacterial translocase SecF protein signature 153 167 3.5E-32 T 21-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VFU_RS13565 6507878b154491dda0ca40b3e759dac2 315 PRINTS PR01755 Bacterial translocase SecF protein signature 201 219 3.5E-32 T 21-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VFU_RS13565 6507878b154491dda0ca40b3e759dac2 315 PRINTS PR01755 Bacterial translocase SecF protein signature 233 248 3.5E-32 T 21-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VFU_RS13565 6507878b154491dda0ca40b3e759dac2 315 PRINTS PR01755 Bacterial translocase SecF protein signature 38 53 3.5E-32 T 21-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VFU_RS13565 6507878b154491dda0ca40b3e759dac2 315 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 11 296 29.291 T 21-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 VFU_RS13565 6507878b154491dda0ca40b3e759dac2 315 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 117 282 3.3E-56 T 21-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VFU_RS13565 6507878b154491dda0ca40b3e759dac2 315 Gene3D G3DSA:1.20.1640.10 129 293 3.7E-25 T 21-04-2016 VFU_RS09725 b0162ae54645516691647c002b2bff91 940 Gene3D G3DSA:3.30.420.40 5 227 9.4E-34 T 21-04-2016 VFU_RS09725 b0162ae54645516691647c002b2bff91 940 Pfam PF12531 DNA-K related protein 690 937 6.6E-103 T 21-04-2016 IPR021030 Protein of unknown function DUF3731 VFU_RS09725 b0162ae54645516691647c002b2bff91 940 Gene3D G3DSA:3.30.420.40 228 338 7.5E-17 T 21-04-2016 VFU_RS09725 b0162ae54645516691647c002b2bff91 940 Pfam PF00012 Hsp70 protein 132 310 9.4E-15 T 21-04-2016 IPR013126 Heat shock protein 70 family VFU_RS09725 b0162ae54645516691647c002b2bff91 940 SUPERFAMILY SSF53067 403 456 2.25E-20 T 21-04-2016 VFU_RS09725 b0162ae54645516691647c002b2bff91 940 SUPERFAMILY SSF53067 223 369 2.25E-20 T 21-04-2016 VFU_RS09725 b0162ae54645516691647c002b2bff91 940 PANTHER PTHR19375:SF226 44 69 1.1E-92 T 21-04-2016 VFU_RS09725 b0162ae54645516691647c002b2bff91 940 PANTHER PTHR19375:SF226 85 279 1.1E-92 T 21-04-2016 VFU_RS09725 b0162ae54645516691647c002b2bff91 940 PANTHER PTHR19375:SF226 6 23 1.1E-92 T 21-04-2016 VFU_RS09725 b0162ae54645516691647c002b2bff91 940 PANTHER PTHR19375 44 69 1.1E-92 T 21-04-2016 VFU_RS09725 b0162ae54645516691647c002b2bff91 940 PANTHER PTHR19375 85 279 1.1E-92 T 21-04-2016 VFU_RS09725 b0162ae54645516691647c002b2bff91 940 PANTHER PTHR19375 6 23 1.1E-92 T 21-04-2016 VFU_RS09725 b0162ae54645516691647c002b2bff91 940 PRINTS PR00301 70kDa heat shock protein signature 6 19 4.8E-9 T 21-04-2016 IPR013126 Heat shock protein 70 family VFU_RS09725 b0162ae54645516691647c002b2bff91 940 PRINTS PR00301 70kDa heat shock protein signature 165 185 4.8E-9 T 21-04-2016 IPR013126 Heat shock protein 70 family VFU_RS09725 b0162ae54645516691647c002b2bff91 940 PRINTS PR00301 70kDa heat shock protein signature 232 242 4.8E-9 T 21-04-2016 IPR013126 Heat shock protein 70 family VFU_RS09725 b0162ae54645516691647c002b2bff91 940 PRINTS PR00301 70kDa heat shock protein signature 398 418 4.8E-9 T 21-04-2016 IPR013126 Heat shock protein 70 family VFU_RS09725 b0162ae54645516691647c002b2bff91 940 SUPERFAMILY SSF53067 6 209 8.03E-31 T 21-04-2016 VFU_RS13770 9f8b977951317e5617202bad63dd4601 1173 SUPERFAMILY SSF52980 843 1151 1.18E-71 T 21-04-2016 IPR011335 Restriction endonuclease type II-like VFU_RS13770 9f8b977951317e5617202bad63dd4601 1173 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 2 820 2.2E-299 T 21-04-2016 VFU_RS13770 9f8b977951317e5617202bad63dd4601 1173 Gene3D G3DSA:3.40.50.300 672 768 5.1E-7 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS13770 9f8b977951317e5617202bad63dd4601 1173 Gene3D G3DSA:3.40.50.300 374 466 5.1E-7 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS13770 9f8b977951317e5617202bad63dd4601 1173 PANTHER PTHR30591 1 1169 0.0 T 21-04-2016 VFU_RS13770 9f8b977951317e5617202bad63dd4601 1173 Gene3D G3DSA:1.10.10.160 86 182 6.0E-36 T 21-04-2016 IPR013986 DExx box DNA helicase domain VFU_RS13770 9f8b977951317e5617202bad63dd4601 1173 PANTHER PTHR30591:SF1 1 1169 0.0 T 21-04-2016 VFU_RS13770 9f8b977951317e5617202bad63dd4601 1173 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1125 0.0 T 21-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 VFU_RS13770 9f8b977951317e5617202bad63dd4601 1173 SUPERFAMILY SSF52540 2 361 1.26E-122 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS13770 9f8b977951317e5617202bad63dd4601 1173 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1161 13.323 T 21-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 VFU_RS13770 9f8b977951317e5617202bad63dd4601 1173 SUPERFAMILY SSF52540 380 824 7.22E-102 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS13770 9f8b977951317e5617202bad63dd4601 1173 PIRSF PIRSF000980 1 1163 0.0 T 21-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 VFU_RS02270 f80efa32b5efb7891d89bb64a178714e 275 ProSitePatterns PS01229 Hypothetical cof family signature 2. 222 244 - T 21-04-2016 VFU_RS02270 f80efa32b5efb7891d89bb64a178714e 275 PANTHER PTHR10000:SF20 9 275 9.3E-131 T 21-04-2016 VFU_RS02270 f80efa32b5efb7891d89bb64a178714e 275 Gene3D G3DSA:3.40.50.1000 187 274 1.1E-54 T 21-04-2016 IPR023214 HAD-like domain VFU_RS02270 f80efa32b5efb7891d89bb64a178714e 275 Gene3D G3DSA:3.40.50.1000 3 80 1.1E-54 T 21-04-2016 IPR023214 HAD-like domain VFU_RS02270 f80efa32b5efb7891d89bb64a178714e 275 Gene3D G3DSA:3.30.1240.10 91 186 1.1E-23 T 21-04-2016 VFU_RS02270 f80efa32b5efb7891d89bb64a178714e 275 Pfam PF08282 haloacid dehalogenase-like hydrolase 13 270 1.1E-62 T 21-04-2016 IPR023214 HAD-like domain VFU_RS02270 f80efa32b5efb7891d89bb64a178714e 275 PANTHER PTHR10000 9 275 9.3E-131 T 21-04-2016 VFU_RS02270 f80efa32b5efb7891d89bb64a178714e 275 SUPERFAMILY SSF56784 6 274 2.0E-67 T 21-04-2016 IPR023214 HAD-like domain VFU_RS02270 f80efa32b5efb7891d89bb64a178714e 275 ProSitePatterns PS01228 Hypothetical cof family signature 1. 12 23 - T 21-04-2016 IPR000150 Cof protein GO:0016787 VFU_RS02270 f80efa32b5efb7891d89bb64a178714e 275 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 12 270 1.3E-59 T 21-04-2016 IPR000150 Cof protein GO:0016787 VFU_RS02270 f80efa32b5efb7891d89bb64a178714e 275 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 12 241 8.7E-33 T 21-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 VFU_RS06505 f167fe856abbff1cf67249d11de16092 307 Gene3D G3DSA:3.40.366.10 197 301 2.4E-74 T 21-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 VFU_RS06505 f167fe856abbff1cf67249d11de16092 307 Gene3D G3DSA:3.40.366.10 2 122 2.4E-74 T 21-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 VFU_RS06505 f167fe856abbff1cf67249d11de16092 307 SUPERFAMILY SSF52151 190 305 5.23E-81 T 21-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 VFU_RS06505 f167fe856abbff1cf67249d11de16092 307 SUPERFAMILY SSF52151 4 122 5.23E-81 T 21-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 VFU_RS06505 f167fe856abbff1cf67249d11de16092 307 Pfam PF00698 Acyl transferase domain 7 291 3.1E-39 T 21-04-2016 IPR014043 Acyl transferase VFU_RS06505 f167fe856abbff1cf67249d11de16092 307 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 4.5E-126 T 21-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 VFU_RS06505 f167fe856abbff1cf67249d11de16092 307 PANTHER PTHR10982 1 306 2.7E-161 T 21-04-2016 VFU_RS06505 f167fe856abbff1cf67249d11de16092 307 Gene3D G3DSA:3.30.70.250 125 196 8.8E-32 T 21-04-2016 VFU_RS06505 f167fe856abbff1cf67249d11de16092 307 PIRSF PIRSF000446 1 307 8.7E-136 T 21-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 VFU_RS06505 f167fe856abbff1cf67249d11de16092 307 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 306 2.2E-46 T 21-04-2016 IPR020801 Polyketide synthase, acyl transferase domain VFU_RS06505 f167fe856abbff1cf67249d11de16092 307 SUPERFAMILY SSF55048 128 197 2.75E-18 T 21-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 VFU_RS10845 9f5572b68ae68eb9475b3018f2cf15c6 268 Gene3D G3DSA:3.20.20.70 1 267 7.5E-97 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS10845 9f5572b68ae68eb9475b3018f2cf15c6 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 6.7E-97 T 21-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 VFU_RS10845 9f5572b68ae68eb9475b3018f2cf15c6 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 37.852 T 21-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 VFU_RS10845 9f5572b68ae68eb9475b3018f2cf15c6 268 PANTHER PTHR10314 1 51 1.5E-27 T 21-04-2016 VFU_RS10845 9f5572b68ae68eb9475b3018f2cf15c6 268 PANTHER PTHR10314 74 154 1.5E-27 T 21-04-2016 VFU_RS10845 9f5572b68ae68eb9475b3018f2cf15c6 268 SUPERFAMILY SSF51366 1 266 4.62E-92 T 21-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 VFU_RS10845 9f5572b68ae68eb9475b3018f2cf15c6 268 PANTHER PTHR10314:SF4 1 51 1.5E-27 T 21-04-2016 VFU_RS10845 9f5572b68ae68eb9475b3018f2cf15c6 268 PANTHER PTHR10314:SF4 74 154 1.5E-27 T 21-04-2016 VFU_RS10845 9f5572b68ae68eb9475b3018f2cf15c6 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 1.1E-101 T 21-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 VFU_RS10845 9f5572b68ae68eb9475b3018f2cf15c6 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 21-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 VFU_RS00835 3af55fd1f6e1a37b4150d0bcddafd218 224 PANTHER PTHR30471:SF5 1 224 5.5E-146 T 21-04-2016 VFU_RS00835 3af55fd1f6e1a37b4150d0bcddafd218 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 3.8E-78 T 21-04-2016 IPR001405 RadC protein VFU_RS00835 3af55fd1f6e1a37b4150d0bcddafd218 224 PANTHER PTHR30471 1 224 5.5E-146 T 21-04-2016 VFU_RS00835 3af55fd1f6e1a37b4150d0bcddafd218 224 SUPERFAMILY SSF47781 17 91 7.12E-11 T 21-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 VFU_RS00835 3af55fd1f6e1a37b4150d0bcddafd218 224 Gene3D G3DSA:3.40.140.10 101 224 4.7E-51 T 21-04-2016 VFU_RS00835 3af55fd1f6e1a37b4150d0bcddafd218 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 21-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site VFU_RS00835 3af55fd1f6e1a37b4150d0bcddafd218 224 Pfam PF04002 RadC-like JAB domain 104 222 3.2E-45 T 21-04-2016 IPR025657 RadC-like JAB domain VFU_RS01175 d4da3cf850825596b36e22c70e8fc164 724 PANTHER PTHR11070 7 724 3.2E-243 T 21-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 VFU_RS01175 d4da3cf850825596b36e22c70e8fc164 724 Gene3D G3DSA:1.10.486.10 389 542 9.6E-51 T 21-04-2016 VFU_RS01175 d4da3cf850825596b36e22c70e8fc164 724 Gene3D G3DSA:1.10.10.160 115 191 5.0E-23 T 21-04-2016 IPR013986 DExx box DNA helicase domain VFU_RS01175 d4da3cf850825596b36e22c70e8fc164 724 Gene3D G3DSA:3.40.50.300 287 388 6.6E-72 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS01175 d4da3cf850825596b36e22c70e8fc164 724 Gene3D G3DSA:3.40.50.300 553 643 6.6E-72 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS01175 d4da3cf850825596b36e22c70e8fc164 724 Pfam PF13361 UvrD-like helicase C-terminal domain 278 617 3.1E-78 T 21-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VFU_RS01175 d4da3cf850825596b36e22c70e8fc164 724 SUPERFAMILY SSF52540 8 643 1.72E-178 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS01175 d4da3cf850825596b36e22c70e8fc164 724 Pfam PF00580 UvrD/REP helicase N-terminal domain 11 272 1.2E-74 T 21-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 VFU_RS01175 d4da3cf850825596b36e22c70e8fc164 724 TIGRFAM TIGR01075 uvrD: DNA helicase II 7 722 0.0 T 21-04-2016 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 VFU_RS01175 d4da3cf850825596b36e22c70e8fc164 724 Gene3D G3DSA:3.40.50.300 192 286 1.3E-70 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS01175 d4da3cf850825596b36e22c70e8fc164 724 Gene3D G3DSA:3.40.50.300 8 111 1.3E-70 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS01175 d4da3cf850825596b36e22c70e8fc164 724 PANTHER PTHR11070:SF7 7 724 3.2E-243 T 21-04-2016 VFU_RS00170 c1632e5c5a72709810fc9a3d6b0cb071 626 SMART SM00283 364 625 8.0E-71 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VFU_RS00170 c1632e5c5a72709810fc9a3d6b0cb071 626 Gene3D G3DSA:3.30.450.20 152 270 2.8E-23 T 21-04-2016 VFU_RS00170 c1632e5c5a72709810fc9a3d6b0cb071 626 PANTHER PTHR32089:SF59 1 626 1.0E-188 T 21-04-2016 VFU_RS00170 c1632e5c5a72709810fc9a3d6b0cb071 626 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 412 624 6.7E-47 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VFU_RS00170 c1632e5c5a72709810fc9a3d6b0cb071 626 Gene3D G3DSA:1.10.287.950 379 595 1.6E-57 T 21-04-2016 VFU_RS00170 c1632e5c5a72709810fc9a3d6b0cb071 626 PANTHER PTHR32089 1 626 1.0E-188 T 21-04-2016 VFU_RS00170 c1632e5c5a72709810fc9a3d6b0cb071 626 SUPERFAMILY SSF103190 63 176 3.22E-11 T 21-04-2016 IPR029151 Periplasmic sensor domain-like VFU_RS00170 c1632e5c5a72709810fc9a3d6b0cb071 626 Gene3D G3DSA:3.30.450.20 86 151 1.7E-20 T 21-04-2016 VFU_RS00170 c1632e5c5a72709810fc9a3d6b0cb071 626 Pfam PF02743 Cache domain 38 258 3.1E-27 T 21-04-2016 IPR033479 Double Cache domain 1 VFU_RS00170 c1632e5c5a72709810fc9a3d6b0cb071 626 SMART SM00304 384 451 76.0 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS00170 c1632e5c5a72709810fc9a3d6b0cb071 626 SMART SM00304 295 349 1.8E-10 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS00170 c1632e5c5a72709810fc9a3d6b0cb071 626 SUPERFAMILY SSF58104 317 626 6.28E-78 T 21-04-2016 VFU_RS00170 c1632e5c5a72709810fc9a3d6b0cb071 626 Pfam PF00672 HAMP domain 277 344 3.2E-12 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS00170 c1632e5c5a72709810fc9a3d6b0cb071 626 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 491 520 3.1E-21 T 21-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VFU_RS00170 c1632e5c5a72709810fc9a3d6b0cb071 626 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 272 292 3.1E-21 T 21-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VFU_RS00170 c1632e5c5a72709810fc9a3d6b0cb071 626 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 462 489 3.1E-21 T 21-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VFU_RS12370 532e6ca85f2934d1d96c8460a2f65e86 367 Gene3D G3DSA:3.40.50.2300 22 142 1.5E-32 T 21-04-2016 VFU_RS12370 532e6ca85f2934d1d96c8460a2f65e86 367 SMART SM00448 20 132 6.4E-28 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS12370 532e6ca85f2934d1d96c8460a2f65e86 367 SUPERFAMILY SSF52172 21 137 2.7E-32 T 21-04-2016 IPR011006 CheY-like superfamily VFU_RS12370 532e6ca85f2934d1d96c8460a2f65e86 367 Pfam PF00072 Response regulator receiver domain 22 125 2.8E-26 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS12370 532e6ca85f2934d1d96c8460a2f65e86 367 PANTHER PTHR26402 20 122 4.8E-33 T 21-04-2016 VFU_RS07355 59eeb7be4258cb6aa7b0994bbe0dbeb7 284 Gene3D G3DSA:3.40.1190.20 11 270 7.8E-100 T 21-04-2016 IPR029056 Ribokinase-like VFU_RS07355 59eeb7be4258cb6aa7b0994bbe0dbeb7 284 PANTHER PTHR20858 1 284 1.5E-118 T 21-04-2016 VFU_RS07355 59eeb7be4258cb6aa7b0994bbe0dbeb7 284 SUPERFAMILY SSF53613 9 272 2.81E-81 T 21-04-2016 IPR029056 Ribokinase-like VFU_RS07355 59eeb7be4258cb6aa7b0994bbe0dbeb7 284 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 13 270 1.7E-99 T 21-04-2016 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VFU_RS07355 59eeb7be4258cb6aa7b0994bbe0dbeb7 284 Pfam PF08543 Phosphomethylpyrimidine kinase 20 268 7.3E-93 T 21-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 VFU_RS07355 59eeb7be4258cb6aa7b0994bbe0dbeb7 284 PANTHER PTHR20858:SF17 1 284 1.5E-118 T 21-04-2016 VFU_RS05390 6105335ff123fa57c2ffffd2d94b352a 814 Gene3D G3DSA:1.10.540.10 96 235 7.5E-30 T 21-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 VFU_RS05390 6105335ff123fa57c2ffffd2d94b352a 814 PANTHER PTHR10909:SF321 50 532 4.5E-297 T 21-04-2016 VFU_RS05390 6105335ff123fa57c2ffffd2d94b352a 814 PANTHER PTHR10909 50 532 4.5E-297 T 21-04-2016 VFU_RS05390 6105335ff123fa57c2ffffd2d94b352a 814 SUPERFAMILY SSF56645 120 356 1.31E-43 T 21-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 VFU_RS05390 6105335ff123fa57c2ffffd2d94b352a 814 SUPERFAMILY SSF47203 361 508 8.38E-25 T 21-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VFU_RS05390 6105335ff123fa57c2ffffd2d94b352a 814 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 140 234 2.5E-15 T 21-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 VFU_RS05390 6105335ff123fa57c2ffffd2d94b352a 814 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 361 508 2.3E-15 T 21-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VFU_RS05390 6105335ff123fa57c2ffffd2d94b352a 814 Gene3D G3DSA:2.40.110.10 238 348 3.4E-15 T 21-04-2016 VFU_RS05390 6105335ff123fa57c2ffffd2d94b352a 814 Pfam PF09317 Domain of unknown function (DUF1974) 515 796 9.5E-115 T 21-04-2016 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.-|UniPathway: UPA00659 VFU_RS05390 6105335ff123fa57c2ffffd2d94b352a 814 Gene3D G3DSA:1.20.140.10 349 508 5.4E-26 T 21-04-2016 VFU_RS13290 3921a1128b1d8024453b8c7462d7fec5 1087 PANTHER PTHR30195:SF13 858 1011 1.2E-145 T 21-04-2016 VFU_RS13290 3921a1128b1d8024453b8c7462d7fec5 1087 PANTHER PTHR30195:SF13 3 467 1.2E-145 T 21-04-2016 VFU_RS13290 3921a1128b1d8024453b8c7462d7fec5 1087 PANTHER PTHR30195:SF13 495 838 1.2E-145 T 21-04-2016 VFU_RS13290 3921a1128b1d8024453b8c7462d7fec5 1087 Gene3D G3DSA:3.40.50.300 308 520 1.6E-13 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS13290 3921a1128b1d8024453b8c7462d7fec5 1087 SMART SM00487 311 547 2.2E-8 T 21-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VFU_RS13290 3921a1128b1d8024453b8c7462d7fec5 1087 Pfam PF04851 Type III restriction enzyme, res subunit 315 475 2.2E-12 T 21-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VFU_RS13290 3921a1128b1d8024453b8c7462d7fec5 1087 PANTHER PTHR30195 858 1011 1.2E-145 T 21-04-2016 VFU_RS13290 3921a1128b1d8024453b8c7462d7fec5 1087 PANTHER PTHR30195 3 467 1.2E-145 T 21-04-2016 VFU_RS13290 3921a1128b1d8024453b8c7462d7fec5 1087 PANTHER PTHR30195 495 838 1.2E-145 T 21-04-2016 VFU_RS13290 3921a1128b1d8024453b8c7462d7fec5 1087 SUPERFAMILY SSF52540 290 477 8.7E-19 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS13290 3921a1128b1d8024453b8c7462d7fec5 1087 SUPERFAMILY SSF52540 505 571 8.7E-19 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS13290 3921a1128b1d8024453b8c7462d7fec5 1087 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 129 237 1.3E-9 T 21-04-2016 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 VFU_RS13520 ed9af551b14181986e7a6925d95cd57b 617 SUPERFAMILY SSF53067 200 377 5.18E-50 T 21-04-2016 VFU_RS13520 ed9af551b14181986e7a6925d95cd57b 617 Gene3D G3DSA:2.60.34.10 387 528 2.8E-55 T 21-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain VFU_RS13520 ed9af551b14181986e7a6925d95cd57b 617 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 21-04-2016 IPR018181 Heat shock protein 70, conserved site VFU_RS13520 ed9af551b14181986e7a6925d95cd57b 617 Gene3D G3DSA:3.30.420.40 133 205 1.4E-52 T 21-04-2016 VFU_RS13520 ed9af551b14181986e7a6925d95cd57b 617 Gene3D G3DSA:3.30.420.40 21 69 1.4E-52 T 21-04-2016 VFU_RS13520 ed9af551b14181986e7a6925d95cd57b 617 Gene3D G3DSA:1.20.1270.10 529 616 4.7E-31 T 21-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain VFU_RS13520 ed9af551b14181986e7a6925d95cd57b 617 SUPERFAMILY SSF100920 384 537 7.72E-52 T 21-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain VFU_RS13520 ed9af551b14181986e7a6925d95cd57b 617 SUPERFAMILY SSF53067 20 196 2.37E-52 T 21-04-2016 VFU_RS13520 ed9af551b14181986e7a6925d95cd57b 617 Gene3D G3DSA:3.30.420.40 314 356 5.4E-32 T 21-04-2016 VFU_RS13520 ed9af551b14181986e7a6925d95cd57b 617 Gene3D G3DSA:3.30.420.40 206 238 5.4E-32 T 21-04-2016 VFU_RS13520 ed9af551b14181986e7a6925d95cd57b 617 SUPERFAMILY SSF100934 504 616 2.75E-35 T 21-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain VFU_RS13520 ed9af551b14181986e7a6925d95cd57b 617 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 616 2.5E-267 T 21-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 VFU_RS13520 ed9af551b14181986e7a6925d95cd57b 617 Gene3D G3DSA:3.90.640.10 239 309 4.9E-6 T 21-04-2016 VFU_RS13520 ed9af551b14181986e7a6925d95cd57b 617 PANTHER PTHR19375:SF176 19 606 0.0 T 21-04-2016 VFU_RS13520 ed9af551b14181986e7a6925d95cd57b 617 Gene3D G3DSA:3.30.30.30 70 120 4.8E-11 T 21-04-2016 VFU_RS13520 ed9af551b14181986e7a6925d95cd57b 617 Pfam PF00012 Hsp70 protein 22 601 2.2E-193 T 21-04-2016 IPR013126 Heat shock protein 70 family VFU_RS13520 ed9af551b14181986e7a6925d95cd57b 617 PRINTS PR00301 70kDa heat shock protein signature 211 221 4.93E-55 T 21-04-2016 IPR013126 Heat shock protein 70 family VFU_RS13520 ed9af551b14181986e7a6925d95cd57b 617 PRINTS PR00301 70kDa heat shock protein signature 360 380 4.93E-55 T 21-04-2016 IPR013126 Heat shock protein 70 family VFU_RS13520 ed9af551b14181986e7a6925d95cd57b 617 PRINTS PR00301 70kDa heat shock protein signature 329 345 4.93E-55 T 21-04-2016 IPR013126 Heat shock protein 70 family VFU_RS13520 ed9af551b14181986e7a6925d95cd57b 617 PRINTS PR00301 70kDa heat shock protein signature 48 60 4.93E-55 T 21-04-2016 IPR013126 Heat shock protein 70 family VFU_RS13520 ed9af551b14181986e7a6925d95cd57b 617 PRINTS PR00301 70kDa heat shock protein signature 20 33 4.93E-55 T 21-04-2016 IPR013126 Heat shock protein 70 family VFU_RS13520 ed9af551b14181986e7a6925d95cd57b 617 PRINTS PR00301 70kDa heat shock protein signature 152 172 4.93E-55 T 21-04-2016 IPR013126 Heat shock protein 70 family VFU_RS13520 ed9af551b14181986e7a6925d95cd57b 617 PRINTS PR00301 70kDa heat shock protein signature 466 482 4.93E-55 T 21-04-2016 IPR013126 Heat shock protein 70 family VFU_RS13520 ed9af551b14181986e7a6925d95cd57b 617 PRINTS PR00301 70kDa heat shock protein signature 385 404 4.93E-55 T 21-04-2016 IPR013126 Heat shock protein 70 family VFU_RS13520 ed9af551b14181986e7a6925d95cd57b 617 PANTHER PTHR19375 19 606 0.0 T 21-04-2016 VFU_RS13520 ed9af551b14181986e7a6925d95cd57b 617 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 21-04-2016 IPR018181 Heat shock protein 70, conserved site VFU_RS13520 ed9af551b14181986e7a6925d95cd57b 617 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 617 45.806 T 21-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 VFU_RS11155 f4fa54201685e4b8d86d3236a297eb2f 781 PANTHER PTHR32331 1 714 0.0 T 21-04-2016 VFU_RS11155 f4fa54201685e4b8d86d3236a297eb2f 781 Pfam PF11842 Domain of unknown function (DUF3362) 583 725 2.4E-43 T 21-04-2016 IPR024560 Uncharacterised protein family UPF0313, C-terminal VFU_RS11155 f4fa54201685e4b8d86d3236a297eb2f 781 Gene3D G3DSA:3.80.30.20 363 620 6.3E-48 T 21-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe VFU_RS11155 f4fa54201685e4b8d86d3236a297eb2f 781 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 369 389 - T 21-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 VFU_RS11155 f4fa54201685e4b8d86d3236a297eb2f 781 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 21 684 47.878 T 21-04-2016 IPR022946 Uncharacterised protein family UPF0313 VFU_RS11155 f4fa54201685e4b8d86d3236a297eb2f 781 Pfam PF08497 Radical SAM N-terminal 22 368 2.5E-143 T 21-04-2016 IPR013704 Uncharacterised protein family UPF0313, N-terminal VFU_RS11155 f4fa54201685e4b8d86d3236a297eb2f 781 PANTHER PTHR32331:SF3 1 714 0.0 T 21-04-2016 VFU_RS11155 f4fa54201685e4b8d86d3236a297eb2f 781 SMART SM00729 365 615 1.2E-4 T 21-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 VFU_RS11155 f4fa54201685e4b8d86d3236a297eb2f 781 SUPERFAMILY SSF102114 368 429 3.4E-11 T 21-04-2016 VFU_RS11155 f4fa54201685e4b8d86d3236a297eb2f 781 SUPERFAMILY SSF102114 459 606 3.4E-11 T 21-04-2016 VFU_RS11155 f4fa54201685e4b8d86d3236a297eb2f 781 Pfam PF04055 Radical SAM superfamily 369 574 1.9E-19 T 21-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VFU_RS11155 f4fa54201685e4b8d86d3236a297eb2f 781 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 22 634 2.7E-262 T 21-04-2016 IPR022946 Uncharacterised protein family UPF0313 VFU_RS11020 bc415424ac7706aea3060c6bfc61e209 244 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 175 241 6.5E-17 T 21-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VFU_RS11020 bc415424ac7706aea3060c6bfc61e209 244 PANTHER PTHR30435:SF18 1 243 8.2E-56 T 21-04-2016 VFU_RS11020 bc415424ac7706aea3060c6bfc61e209 244 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 5 116 4.2E-26 T 21-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G VFU_RS11020 bc415424ac7706aea3060c6bfc61e209 244 PANTHER PTHR30435 1 243 8.2E-56 T 21-04-2016 VFU_RS11020 bc415424ac7706aea3060c6bfc61e209 244 SUPERFAMILY SSF117143 77 203 3.27E-10 T 21-04-2016 VFU_RS04055 01404aa73cd055564189d69064ea55b5 323 PANTHER PTHR22602 13 303 4.5E-59 T 21-04-2016 VFU_RS04055 01404aa73cd055564189d69064ea55b5 323 PANTHER PTHR22602:SF0 13 303 4.5E-59 T 21-04-2016 VFU_RS04055 01404aa73cd055564189d69064ea55b5 323 SUPERFAMILY SSF103025 16 235 1.26E-54 T 21-04-2016 VFU_RS04055 01404aa73cd055564189d69064ea55b5 323 Gene3D G3DSA:3.30.70.1400 29 113 1.1E-31 T 21-04-2016 VFU_RS04055 01404aa73cd055564189d69064ea55b5 323 SUPERFAMILY SSF101790 237 321 4.97E-20 T 21-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain VFU_RS04055 01404aa73cd055564189d69064ea55b5 323 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 181 245 3.8E-24 T 21-04-2016 IPR017703 YgfZ/GcvT conserved site VFU_RS04055 01404aa73cd055564189d69064ea55b5 323 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 317 43.278 T 21-04-2016 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 VFU_RS06835 90e346a5766ab1b50af4019aed1b2adb 329 PANTHER PTHR33376 1 325 6.2E-68 T 21-04-2016 VFU_RS06835 90e346a5766ab1b50af4019aed1b2adb 329 SUPERFAMILY SSF53850 143 264 1.88E-5 T 21-04-2016 VFU_RS06835 90e346a5766ab1b50af4019aed1b2adb 329 PANTHER PTHR33376:SF6 1 325 6.2E-68 T 21-04-2016 VFU_RS06835 90e346a5766ab1b50af4019aed1b2adb 329 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 38 311 5.9E-65 T 21-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 VFU_RS06835 90e346a5766ab1b50af4019aed1b2adb 329 PIRSF PIRSF006470 1 329 1.6E-66 T 21-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 VFU_RS06835 90e346a5766ab1b50af4019aed1b2adb 329 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 35 276 4.6E-56 T 21-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 VFU_RS11840 a29a927ed548ee88f06e26e0263a59be 241 Pfam PF00072 Response regulator receiver domain 6 116 1.2E-29 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS11840 a29a927ed548ee88f06e26e0263a59be 241 SUPERFAMILY SSF46894 131 234 1.84E-19 T 21-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VFU_RS11840 a29a927ed548ee88f06e26e0263a59be 241 SMART SM00448 4 115 4.7E-43 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS11840 a29a927ed548ee88f06e26e0263a59be 241 Pfam PF00486 Transcriptional regulatory protein, C terminal 161 233 2.8E-13 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VFU_RS11840 a29a927ed548ee88f06e26e0263a59be 241 Gene3D G3DSA:1.10.10.10 133 236 3.3E-19 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS11840 a29a927ed548ee88f06e26e0263a59be 241 Gene3D G3DSA:3.40.50.2300 2 131 6.5E-42 T 21-04-2016 VFU_RS11840 a29a927ed548ee88f06e26e0263a59be 241 SUPERFAMILY SSF52172 2 128 1.38E-41 T 21-04-2016 IPR011006 CheY-like superfamily VFU_RS11840 a29a927ed548ee88f06e26e0263a59be 241 PANTHER PTHR26402 4 238 2.9E-92 T 21-04-2016 VFU_RS11840 a29a927ed548ee88f06e26e0263a59be 241 PANTHER PTHR26402:SF528 4 238 2.9E-92 T 21-04-2016 VFU_RS11840 a29a927ed548ee88f06e26e0263a59be 241 SMART SM00862 156 233 1.6E-10 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VFU_RS13875 b1bccaa5214ae42c252b22196c8934b8 162 Pfam PF07811 TadE-like protein 10 52 2.5E-11 T 21-04-2016 IPR012495 TadE-like VFU_RS14645 adaf983c5e7b2ca5eb1990dba021bd5b 676 SMART SM00482 416 624 2.4E-19 T 21-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS14645 adaf983c5e7b2ca5eb1990dba021bd5b 676 PANTHER PTHR10133 129 179 1.3E-45 T 21-04-2016 VFU_RS14645 adaf983c5e7b2ca5eb1990dba021bd5b 676 PANTHER PTHR10133 202 671 1.3E-45 T 21-04-2016 VFU_RS14645 adaf983c5e7b2ca5eb1990dba021bd5b 676 Gene3D G3DSA:3.30.70.370 395 438 4.5E-23 T 21-04-2016 VFU_RS14645 adaf983c5e7b2ca5eb1990dba021bd5b 676 Gene3D G3DSA:3.30.70.370 556 656 4.5E-23 T 21-04-2016 VFU_RS14645 adaf983c5e7b2ca5eb1990dba021bd5b 676 Gene3D G3DSA:3.30.420.10 118 281 3.1E-10 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VFU_RS14645 adaf983c5e7b2ca5eb1990dba021bd5b 676 Gene3D G3DSA:1.10.150.20 439 555 5.2E-16 T 21-04-2016 VFU_RS14645 adaf983c5e7b2ca5eb1990dba021bd5b 676 PRINTS PR00868 DNA-polymerase family A (pol I) signature 492 517 2.2E-20 T 21-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS14645 adaf983c5e7b2ca5eb1990dba021bd5b 676 PRINTS PR00868 DNA-polymerase family A (pol I) signature 579 595 2.2E-20 T 21-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS14645 adaf983c5e7b2ca5eb1990dba021bd5b 676 PRINTS PR00868 DNA-polymerase family A (pol I) signature 551 562 2.2E-20 T 21-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS14645 adaf983c5e7b2ca5eb1990dba021bd5b 676 PRINTS PR00868 DNA-polymerase family A (pol I) signature 388 410 2.2E-20 T 21-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS14645 adaf983c5e7b2ca5eb1990dba021bd5b 676 PRINTS PR00868 DNA-polymerase family A (pol I) signature 607 620 2.2E-20 T 21-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS14645 adaf983c5e7b2ca5eb1990dba021bd5b 676 SUPERFAMILY SSF56672 262 656 2.78E-70 T 21-04-2016 VFU_RS14645 adaf983c5e7b2ca5eb1990dba021bd5b 676 PANTHER PTHR10133:SF27 129 179 1.3E-45 T 21-04-2016 VFU_RS14645 adaf983c5e7b2ca5eb1990dba021bd5b 676 PANTHER PTHR10133:SF27 202 671 1.3E-45 T 21-04-2016 VFU_RS14645 adaf983c5e7b2ca5eb1990dba021bd5b 676 Gene3D G3DSA:1.20.1060.10 282 394 4.0E-8 T 21-04-2016 VFU_RS14645 adaf983c5e7b2ca5eb1990dba021bd5b 676 Pfam PF00476 DNA polymerase family A 293 657 2.8E-51 T 21-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS08745 4bed1a4ff6aff01a0b31dc6d04fe6c61 514 SUPERFAMILY SSF55785 83 168 8.03E-10 T 21-04-2016 IPR000014 PAS domain VFU_RS08745 4bed1a4ff6aff01a0b31dc6d04fe6c61 514 SUPERFAMILY SSF52540 205 444 1.13E-62 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS08745 4bed1a4ff6aff01a0b31dc6d04fe6c61 514 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 290 305 - T 21-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VFU_RS08745 4bed1a4ff6aff01a0b31dc6d04fe6c61 514 Gene3D G3DSA:3.30.70.260 1 68 7.6E-7 T 21-04-2016 VFU_RS08745 4bed1a4ff6aff01a0b31dc6d04fe6c61 514 Pfam PF00158 Sigma-54 interaction domain 206 370 5.4E-57 T 21-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VFU_RS08745 4bed1a4ff6aff01a0b31dc6d04fe6c61 514 SMART SM00091 80 146 2.0E-4 T 21-04-2016 IPR000014 PAS domain VFU_RS08745 4bed1a4ff6aff01a0b31dc6d04fe6c61 514 Gene3D G3DSA:3.30.450.20 79 169 3.4E-9 T 21-04-2016 VFU_RS08745 4bed1a4ff6aff01a0b31dc6d04fe6c61 514 SMART SM00382 225 368 3.1E-10 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS08745 4bed1a4ff6aff01a0b31dc6d04fe6c61 514 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 229 242 - T 21-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VFU_RS08745 4bed1a4ff6aff01a0b31dc6d04fe6c61 514 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 417 426 - T 21-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VFU_RS08745 4bed1a4ff6aff01a0b31dc6d04fe6c61 514 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 465 513 8.7E-28 T 21-04-2016 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 VFU_RS08745 4bed1a4ff6aff01a0b31dc6d04fe6c61 514 PANTHER PTHR32071 4 511 5.8E-185 T 21-04-2016 VFU_RS08745 4bed1a4ff6aff01a0b31dc6d04fe6c61 514 PANTHER PTHR32071:SF3 4 511 5.8E-185 T 21-04-2016 VFU_RS08745 4bed1a4ff6aff01a0b31dc6d04fe6c61 514 Gene3D G3DSA:3.40.50.300 202 376 3.0E-51 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS08745 4bed1a4ff6aff01a0b31dc6d04fe6c61 514 SUPERFAMILY SSF46689 458 512 1.79E-8 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS08745 4bed1a4ff6aff01a0b31dc6d04fe6c61 514 Gene3D G3DSA:1.10.10.60 459 512 5.5E-25 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS08745 4bed1a4ff6aff01a0b31dc6d04fe6c61 514 SUPERFAMILY SSF55021 1 68 8.14E-7 T 21-04-2016 VFU_RS08745 4bed1a4ff6aff01a0b31dc6d04fe6c61 514 Gene3D G3DSA:1.10.8.60 377 448 5.0E-18 T 21-04-2016 VFU_RS08745 4bed1a4ff6aff01a0b31dc6d04fe6c61 514 Pfam PF13188 PAS domain 84 131 5.2E-4 T 21-04-2016 IPR000014 PAS domain VFU_RS03020 e8a37c2a01a200382da93cb78d9be479 601 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 21-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 VFU_RS03020 e8a37c2a01a200382da93cb78d9be479 601 SUPERFAMILY SSF56425 227 358 5.53E-41 T 21-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain VFU_RS03020 e8a37c2a01a200382da93cb78d9be479 601 Gene3D G3DSA:3.50.50.60 2 233 1.0E-106 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS03020 e8a37c2a01a200382da93cb78d9be479 601 Gene3D G3DSA:3.50.50.60 353 416 1.0E-106 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS03020 e8a37c2a01a200382da93cb78d9be479 601 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 3 582 0.0 T 21-04-2016 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 VFU_RS03020 e8a37c2a01a200382da93cb78d9be479 601 PANTHER PTHR11632:SF50 1 584 0.0 T 21-04-2016 VFU_RS03020 e8a37c2a01a200382da93cb78d9be479 601 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 6.5E-236 T 21-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 VFU_RS03020 e8a37c2a01a200382da93cb78d9be479 601 Gene3D G3DSA:3.90.700.10 234 351 4.8E-35 T 21-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain VFU_RS03020 e8a37c2a01a200382da93cb78d9be479 601 Pfam PF00890 FAD binding domain 7 397 2.1E-112 T 21-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain VFU_RS03020 e8a37c2a01a200382da93cb78d9be479 601 Gene3D G3DSA:4.10.80.40 543 577 3.4E-16 T 21-04-2016 VFU_RS03020 e8a37c2a01a200382da93cb78d9be479 601 SUPERFAMILY SSF46977 444 582 8.63E-44 T 21-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 VFU_RS03020 e8a37c2a01a200382da93cb78d9be479 601 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 2.7E-37 T 21-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 VFU_RS03020 e8a37c2a01a200382da93cb78d9be479 601 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 8.4E-5 T 21-04-2016 VFU_RS03020 e8a37c2a01a200382da93cb78d9be479 601 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 8.4E-5 T 21-04-2016 VFU_RS03020 e8a37c2a01a200382da93cb78d9be479 601 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 6.5E-9 T 21-04-2016 VFU_RS03020 e8a37c2a01a200382da93cb78d9be479 601 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 6.5E-9 T 21-04-2016 VFU_RS03020 e8a37c2a01a200382da93cb78d9be479 601 PIRSF PIRSF000171 1 575 2.5E-44 T 21-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit VFU_RS03020 e8a37c2a01a200382da93cb78d9be479 601 PANTHER PTHR11632 1 584 0.0 T 21-04-2016 VFU_RS03020 e8a37c2a01a200382da93cb78d9be479 601 SUPERFAMILY SSF51905 361 419 5.34E-72 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS03020 e8a37c2a01a200382da93cb78d9be479 601 SUPERFAMILY SSF51905 2 250 5.34E-72 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS03020 e8a37c2a01a200382da93cb78d9be479 601 Gene3D G3DSA:1.20.58.100 426 537 1.3E-36 T 21-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 VFU_RS02490 c0fdd6433339eac07c6869dc026fb173 334 Hamap MF_00540 Adenosine deaminase [add]. 1 331 53.657 T 21-04-2016 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VFU_RS02490 c0fdd6433339eac07c6869dc026fb173 334 Pfam PF00962 Adenosine/AMP deaminase 6 326 9.4E-90 T 21-04-2016 IPR001365 Adenosine/AMP deaminase domain GO:0019239 VFU_RS02490 c0fdd6433339eac07c6869dc026fb173 334 PANTHER PTHR11409 2 333 3.7E-103 T 21-04-2016 VFU_RS02490 c0fdd6433339eac07c6869dc026fb173 334 SUPERFAMILY SSF51556 4 325 1.23E-74 T 21-04-2016 IPR032466 Metal-dependent hydrolase VFU_RS02490 c0fdd6433339eac07c6869dc026fb173 334 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 7 330 2.5E-121 T 21-04-2016 IPR006330 Adenosine/adenine deaminase GO:0019239 VFU_RS02490 c0fdd6433339eac07c6869dc026fb173 334 Gene3D G3DSA:3.20.20.140 3 333 5.9E-96 T 21-04-2016 VFU_RS04960 5bf2b88f2d648f8957293cbb46aec5e9 260 PANTHER PTHR30151 1 260 2.3E-58 T 21-04-2016 VFU_RS04960 5bf2b88f2d648f8957293cbb46aec5e9 260 SUPERFAMILY SSF161098 56 238 1.15E-30 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS04960 5bf2b88f2d648f8957293cbb46aec5e9 260 Gene3D G3DSA:1.10.3720.10 55 246 2.3E-22 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS04960 5bf2b88f2d648f8957293cbb46aec5e9 260 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 246 4.3E-25 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS13590 7f1fbd79ac6d0139cb42b5b3b3d2e848 156 PANTHER PTHR11911:SF90 1 139 3.3E-44 T 21-04-2016 VFU_RS13590 7f1fbd79ac6d0139cb42b5b3b3d2e848 156 Pfam PF00571 CBS domain 4 58 4.2E-13 T 21-04-2016 IPR000644 CBS domain VFU_RS13590 7f1fbd79ac6d0139cb42b5b3b3d2e848 156 Pfam PF00571 CBS domain 79 128 1.8E-9 T 21-04-2016 IPR000644 CBS domain VFU_RS13590 7f1fbd79ac6d0139cb42b5b3b3d2e848 156 SUPERFAMILY SSF54631 1 133 6.19E-33 T 21-04-2016 VFU_RS13590 7f1fbd79ac6d0139cb42b5b3b3d2e848 156 SMART SM00116 84 131 9.2E-7 T 21-04-2016 IPR000644 CBS domain VFU_RS13590 7f1fbd79ac6d0139cb42b5b3b3d2e848 156 SMART SM00116 11 59 1.1E-7 T 21-04-2016 IPR000644 CBS domain VFU_RS13590 7f1fbd79ac6d0139cb42b5b3b3d2e848 156 Gene3D G3DSA:3.20.20.70 3 132 2.7E-31 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS13590 7f1fbd79ac6d0139cb42b5b3b3d2e848 156 PANTHER PTHR11911 1 139 3.3E-44 T 21-04-2016 VFU_RS14485 4bd1cde1ddc1f947cd8b2582a7c69396 350 PANTHER PTHR22942:SF1 3 335 1.7E-203 T 21-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VFU_RS14485 4bd1cde1ddc1f947cd8b2582a7c69396 350 Gene3D G3DSA:3.40.50.300 26 267 8.4E-84 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS14485 4bd1cde1ddc1f947cd8b2582a7c69396 350 SUPERFAMILY SSF54752 269 325 2.09E-20 T 21-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal VFU_RS14485 4bd1cde1ddc1f947cd8b2582a7c69396 350 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 1.5E-168 T 21-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VFU_RS14485 4bd1cde1ddc1f947cd8b2582a7c69396 350 Pfam PF00154 recA bacterial DNA recombination protein 7 267 1.9E-142 T 21-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VFU_RS14485 4bd1cde1ddc1f947cd8b2582a7c69396 350 PRINTS PR00142 RecA protein signature 243 272 7.9E-85 T 21-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VFU_RS14485 4bd1cde1ddc1f947cd8b2582a7c69396 350 PRINTS PR00142 RecA protein signature 297 314 7.9E-85 T 21-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VFU_RS14485 4bd1cde1ddc1f947cd8b2582a7c69396 350 PRINTS PR00142 RecA protein signature 127 156 7.9E-85 T 21-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VFU_RS14485 4bd1cde1ddc1f947cd8b2582a7c69396 350 PRINTS PR00142 RecA protein signature 165 194 7.9E-85 T 21-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VFU_RS14485 4bd1cde1ddc1f947cd8b2582a7c69396 350 PRINTS PR00142 RecA protein signature 93 122 7.9E-85 T 21-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VFU_RS14485 4bd1cde1ddc1f947cd8b2582a7c69396 350 PRINTS PR00142 RecA protein signature 210 238 7.9E-85 T 21-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VFU_RS14485 4bd1cde1ddc1f947cd8b2582a7c69396 350 ProSitePatterns PS00321 recA signature. 213 221 - T 21-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 VFU_RS14485 4bd1cde1ddc1f947cd8b2582a7c69396 350 Hamap MF_00268 Protein RecA [recA]. 5 329 50.267 T 21-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VFU_RS14485 4bd1cde1ddc1f947cd8b2582a7c69396 350 SUPERFAMILY SSF52540 4 266 5.17E-66 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS14485 4bd1cde1ddc1f947cd8b2582a7c69396 350 PANTHER PTHR22942 3 335 1.7E-203 T 21-04-2016 VFU_RS14485 4bd1cde1ddc1f947cd8b2582a7c69396 350 SMART SM00382 57 228 1.6E-8 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS14485 4bd1cde1ddc1f947cd8b2582a7c69396 350 Gene3D G3DSA:3.30.250.10 268 326 2.3E-27 T 21-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal VFU_RS05550 6ce3c26cc3c41d567cc3417d17fcbe74 259 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 259 27.728 T 21-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VFU_RS05550 6ce3c26cc3c41d567cc3417d17fcbe74 259 Pfam PF02107 Flagellar L-ring protein 81 256 2.6E-57 T 21-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VFU_RS05550 6ce3c26cc3c41d567cc3417d17fcbe74 259 PANTHER PTHR34933 1 256 7.6E-135 T 21-04-2016 VFU_RS05550 6ce3c26cc3c41d567cc3417d17fcbe74 259 PRINTS PR01008 Flagellar L-ring protein signature 201 217 4.1E-21 T 21-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VFU_RS05550 6ce3c26cc3c41d567cc3417d17fcbe74 259 PRINTS PR01008 Flagellar L-ring protein signature 103 115 4.1E-21 T 21-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VFU_RS05550 6ce3c26cc3c41d567cc3417d17fcbe74 259 PRINTS PR01008 Flagellar L-ring protein signature 238 252 4.1E-21 T 21-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VFU_RS05550 6ce3c26cc3c41d567cc3417d17fcbe74 259 PRINTS PR01008 Flagellar L-ring protein signature 222 236 4.1E-21 T 21-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VFU_RS05550 6ce3c26cc3c41d567cc3417d17fcbe74 259 PRINTS PR01008 Flagellar L-ring protein signature 175 190 4.1E-21 T 21-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VFU_RS05550 6ce3c26cc3c41d567cc3417d17fcbe74 259 PANTHER PTHR34933:SF2 1 256 7.6E-135 T 21-04-2016 VFU_RS04395 adc0402f1871fda6b6a037886574b793 820 SMART SM00847 387 477 1.4E-7 T 21-04-2016 IPR007502 Helicase-associated domain GO:0004386 VFU_RS04395 adc0402f1871fda6b6a037886574b793 820 PANTHER PTHR18934 3 445 1.9E-132 T 21-04-2016 VFU_RS04395 adc0402f1871fda6b6a037886574b793 820 Pfam PF08482 ATP-dependent helicase C-terminal 673 805 5.6E-51 T 21-04-2016 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal VFU_RS04395 adc0402f1871fda6b6a037886574b793 820 Gene3D G3DSA:3.40.50.300 3 160 5.8E-44 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS04395 adc0402f1871fda6b6a037886574b793 820 PIRSF PIRSF005496 1 819 0.0 T 21-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type VFU_RS04395 adc0402f1871fda6b6a037886574b793 820 PANTHER PTHR18934:SF118 3 445 1.9E-132 T 21-04-2016 VFU_RS04395 adc0402f1871fda6b6a037886574b793 820 Pfam PF00270 DEAD/DEAH box helicase 8 163 3.0E-8 T 21-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VFU_RS04395 adc0402f1871fda6b6a037886574b793 820 Pfam PF04408 Helicase associated domain (HA2) 388 448 1.3E-10 T 21-04-2016 IPR007502 Helicase-associated domain GO:0004386 VFU_RS04395 adc0402f1871fda6b6a037886574b793 820 SUPERFAMILY SSF52540 20 338 2.53E-46 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS04395 adc0402f1871fda6b6a037886574b793 820 SMART SM00490 226 327 5.1E-13 T 21-04-2016 IPR001650 Helicase, C-terminal VFU_RS04395 adc0402f1871fda6b6a037886574b793 820 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 817 0.0 T 21-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type VFU_RS04395 adc0402f1871fda6b6a037886574b793 820 Gene3D G3DSA:3.40.50.300 200 339 1.4E-13 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS04395 adc0402f1871fda6b6a037886574b793 820 SMART SM00487 2 186 1.4E-12 T 21-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VFU_RS04395 adc0402f1871fda6b6a037886574b793 820 Pfam PF00271 Helicase conserved C-terminal domain 204 326 7.4E-11 T 21-04-2016 IPR001650 Helicase, C-terminal VFU_RS00235 cc4fbad50ee177752c2b29a07f9d8641 233 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.402 T 21-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 VFU_RS00235 cc4fbad50ee177752c2b29a07f9d8641 233 PIRSF PIRSF002155 1 227 5.0E-79 T 21-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 VFU_RS00235 cc4fbad50ee177752c2b29a07f9d8641 233 PANTHER PTHR23105:SF5 19 229 4.8E-83 T 21-04-2016 VFU_RS00235 cc4fbad50ee177752c2b29a07f9d8641 233 Gene3D G3DSA:3.30.190.20 18 68 9.7E-48 T 21-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 VFU_RS00235 cc4fbad50ee177752c2b29a07f9d8641 233 Gene3D G3DSA:3.30.190.20 161 225 9.7E-48 T 21-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 VFU_RS00235 cc4fbad50ee177752c2b29a07f9d8641 233 SUPERFAMILY SSF56808 6 225 1.16E-82 T 21-04-2016 IPR023674 Ribosomal protein L1-like VFU_RS00235 cc4fbad50ee177752c2b29a07f9d8641 233 PANTHER PTHR23105 19 229 4.8E-83 T 21-04-2016 VFU_RS00235 cc4fbad50ee177752c2b29a07f9d8641 233 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 2.8E-107 T 21-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 VFU_RS00235 cc4fbad50ee177752c2b29a07f9d8641 233 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 21-04-2016 IPR023673 Ribosomal protein L1, conserved site VFU_RS00235 cc4fbad50ee177752c2b29a07f9d8641 233 Gene3D G3DSA:3.40.50.790 69 159 1.2E-40 T 21-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich VFU_RS00235 cc4fbad50ee177752c2b29a07f9d8641 233 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 3.8E-52 T 21-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein VFU_RS13960 bc4c06df17923e5a128e38db9e690283 326 Gene3D G3DSA:3.40.50.1000 169 297 2.0E-35 T 21-04-2016 IPR023214 HAD-like domain VFU_RS13960 bc4c06df17923e5a128e38db9e690283 326 SUPERFAMILY SSF56784 103 310 1.11E-48 T 21-04-2016 IPR023214 HAD-like domain VFU_RS13960 bc4c06df17923e5a128e38db9e690283 326 PANTHER PTHR10000:SF7 35 316 1.9E-110 T 21-04-2016 VFU_RS13960 bc4c06df17923e5a128e38db9e690283 326 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 102 310 4.1E-82 T 21-04-2016 VFU_RS13960 bc4c06df17923e5a128e38db9e690283 326 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 107 277 7.0E-26 T 21-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 VFU_RS13960 bc4c06df17923e5a128e38db9e690283 326 PANTHER PTHR10000 35 316 1.9E-110 T 21-04-2016 VFU_RS13960 bc4c06df17923e5a128e38db9e690283 326 Pfam PF00702 haloacid dehalogenase-like hydrolase 107 279 6.4E-14 T 21-04-2016 VFU_RS13960 bc4c06df17923e5a128e38db9e690283 326 Gene3D G3DSA:1.10.150.210 117 168 2.1E-27 T 21-04-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 VFU_RS07860 de58ca1fa89cdbebe1a3735b6089fdb4 742 Pfam PF03971 Monomeric isocitrate dehydrogenase 7 740 0.0 T 21-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 VFU_RS07860 de58ca1fa89cdbebe1a3735b6089fdb4 742 PIRSF PIRSF009407 1 742 0.0 T 21-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 VFU_RS07860 de58ca1fa89cdbebe1a3735b6089fdb4 742 SUPERFAMILY SSF53659 5 740 0.0 T 21-04-2016 VFU_RS07860 de58ca1fa89cdbebe1a3735b6089fdb4 742 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 740 0.0 T 21-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 VFU_RS07860 de58ca1fa89cdbebe1a3735b6089fdb4 742 Gene3D G3DSA:3.40.718.10 190 289 6.9E-36 T 21-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 VFU_RS07860 de58ca1fa89cdbebe1a3735b6089fdb4 742 Gene3D G3DSA:3.40.718.10 540 646 6.9E-36 T 21-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 VFU_RS07860 de58ca1fa89cdbebe1a3735b6089fdb4 742 Gene3D G3DSA:3.40.718.10 341 364 6.9E-36 T 21-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 VFU_RS07860 de58ca1fa89cdbebe1a3735b6089fdb4 742 PANTHER PTHR36999 2 742 0.0 T 21-04-2016 VFU_RS15630 3ad916d01cf7cda865902599d67b08a4 278 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 21 278 3.5E-123 T 21-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 VFU_RS15630 3ad916d01cf7cda865902599d67b08a4 278 Gene3D G3DSA:3.40.50.300 20 278 8.9E-92 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS15630 3ad916d01cf7cda865902599d67b08a4 278 SUPERFAMILY SSF52540 20 277 1.21E-60 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS15630 3ad916d01cf7cda865902599d67b08a4 278 Hamap MF_00215 Pantothenate kinase [coaA]. 1 278 151.112 T 21-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 VFU_RS15630 3ad916d01cf7cda865902599d67b08a4 278 PANTHER PTHR10285:SF7 11 271 9.2E-137 T 21-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 VFU_RS15630 3ad916d01cf7cda865902599d67b08a4 278 PANTHER PTHR10285 11 271 9.2E-137 T 21-04-2016 VFU_RS15630 3ad916d01cf7cda865902599d67b08a4 278 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 100 255 5.8E-14 T 21-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 VFU_RS15630 3ad916d01cf7cda865902599d67b08a4 278 PIRSF PIRSF000545 11 278 1.6E-122 T 21-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 VFU_RS13360 abb22a16e54f26bd536a14865e72aa93 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 40 116 2.1E-12 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VFU_RS13360 abb22a16e54f26bd536a14865e72aa93 240 SUPERFAMILY SSF46894 25 118 1.08E-12 T 21-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VFU_RS13360 abb22a16e54f26bd536a14865e72aa93 240 Gene3D G3DSA:1.10.10.10 36 119 3.4E-12 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS13360 abb22a16e54f26bd536a14865e72aa93 240 SMART SM00862 38 116 3.3E-6 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VFU_RS06740 71346b0003fcb052b3605442ff4c7f83 233 Pfam PF13144 Chaperone for flagella basal body P-ring formation 23 229 1.4E-40 T 21-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal VFU_RS06740 71346b0003fcb052b3605442ff4c7f83 233 SMART SM00858 109 170 1.6E-4 T 21-04-2016 IPR013974 SAF domain VFU_RS06740 71346b0003fcb052b3605442ff4c7f83 233 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 97 232 1.4E-34 T 21-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal VFU_RS06740 71346b0003fcb052b3605442ff4c7f83 233 PANTHER PTHR36307 87 229 2.4E-27 T 21-04-2016 VFU_RS09205 9e0b83be3fa9de73fb130d0d486436c1 202 SUPERFAMILY SSF54862 1 183 1.05E-47 T 21-04-2016 VFU_RS09205 9e0b83be3fa9de73fb130d0d486436c1 202 PANTHER PTHR11938 144 182 1.1E-104 T 21-04-2016 VFU_RS09205 9e0b83be3fa9de73fb130d0d486436c1 202 PANTHER PTHR11938 1 125 1.1E-104 T 21-04-2016 VFU_RS09205 9e0b83be3fa9de73fb130d0d486436c1 202 Gene3D G3DSA:3.30.70.20 65 120 4.7E-22 T 21-04-2016 VFU_RS09205 9e0b83be3fa9de73fb130d0d486436c1 202 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VFU_RS09205 9e0b83be3fa9de73fb130d0d486436c1 202 Pfam PF13247 4Fe-4S dicluster domain 54 125 1.4E-10 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VFU_RS09205 9e0b83be3fa9de73fb130d0d486436c1 202 PANTHER PTHR11938:SF96 144 182 1.1E-104 T 21-04-2016 VFU_RS09205 9e0b83be3fa9de73fb130d0d486436c1 202 PANTHER PTHR11938:SF96 1 125 1.1E-104 T 21-04-2016 VFU_RS09205 9e0b83be3fa9de73fb130d0d486436c1 202 Gene3D G3DSA:3.30.70.20 3 64 5.7E-21 T 21-04-2016 VFU_RS09205 9e0b83be3fa9de73fb130d0d486436c1 202 Gene3D G3DSA:3.30.70.20 121 181 5.7E-21 T 21-04-2016 VFU_RS05875 7034b8f12d7b5ff5c555fb40a47a93c6 378 Gene3D G3DSA:1.20.1330.10 279 332 1.8E-60 T 21-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VFU_RS05875 7034b8f12d7b5ff5c555fb40a47a93c6 378 Gene3D G3DSA:1.20.1330.10 55 171 1.8E-60 T 21-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VFU_RS05875 7034b8f12d7b5ff5c555fb40a47a93c6 378 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 8.9E-23 T 21-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VFU_RS05875 7034b8f12d7b5ff5c555fb40a47a93c6 378 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 7.4E-42 T 21-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VFU_RS05875 7034b8f12d7b5ff5c555fb40a47a93c6 378 PANTHER PTHR30244 2 376 9.7E-161 T 21-04-2016 VFU_RS05875 7034b8f12d7b5ff5c555fb40a47a93c6 378 PANTHER PTHR30244:SF1 2 376 9.7E-161 T 21-04-2016 VFU_RS05875 7034b8f12d7b5ff5c555fb40a47a93c6 378 SUPERFAMILY SSF64518 1 376 4.45E-93 T 21-04-2016 VFU_RS05875 7034b8f12d7b5ff5c555fb40a47a93c6 378 PRINTS PR00207 Flagellin signature 76 95 3.8E-25 T 21-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VFU_RS05875 7034b8f12d7b5ff5c555fb40a47a93c6 378 PRINTS PR00207 Flagellin signature 111 134 3.8E-25 T 21-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VFU_RS05875 7034b8f12d7b5ff5c555fb40a47a93c6 378 PRINTS PR00207 Flagellin signature 37 54 3.8E-25 T 21-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VFU_RS05875 7034b8f12d7b5ff5c555fb40a47a93c6 378 Pfam PF07196 Flagellin hook IN motif 199 245 4.9E-9 T 21-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VFU_RS03615 9f40ead6e1889635346c75df1dc5f17f 486 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 373 392 - T 21-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VFU_RS03615 9f40ead6e1889635346c75df1dc5f17f 486 PIRSF PIRSF000774 1 486 7.8E-154 T 21-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VFU_RS03615 9f40ead6e1889635346c75df1dc5f17f 486 Pfam PF04963 Sigma-54 factor, core binding domain 125 314 3.2E-60 T 21-04-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 VFU_RS03615 9f40ead6e1889635346c75df1dc5f17f 486 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 464 471 - T 21-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VFU_RS03615 9f40ead6e1889635346c75df1dc5f17f 486 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 483 3.3E-155 T 21-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VFU_RS03615 9f40ead6e1889635346c75df1dc5f17f 486 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 49 2.7E-17 T 21-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VFU_RS03615 9f40ead6e1889635346c75df1dc5f17f 486 PANTHER PTHR32248 1 486 6.4E-177 T 21-04-2016 VFU_RS03615 9f40ead6e1889635346c75df1dc5f17f 486 PRINTS PR00045 Sigma-54 factor signature 459 477 3.38E-30 T 21-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VFU_RS03615 9f40ead6e1889635346c75df1dc5f17f 486 PRINTS PR00045 Sigma-54 factor signature 385 397 3.38E-30 T 21-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VFU_RS03615 9f40ead6e1889635346c75df1dc5f17f 486 PRINTS PR00045 Sigma-54 factor signature 401 412 3.38E-30 T 21-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VFU_RS03615 9f40ead6e1889635346c75df1dc5f17f 486 PRINTS PR00045 Sigma-54 factor signature 197 214 3.38E-30 T 21-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VFU_RS03615 9f40ead6e1889635346c75df1dc5f17f 486 Pfam PF04552 Sigma-54, DNA binding domain 326 484 1.1E-72 T 21-04-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding VFU_RS03615 9f40ead6e1889635346c75df1dc5f17f 486 PANTHER PTHR32248:SF4 1 486 6.4E-177 T 21-04-2016 VFU_RS02630 cf5a0d14ba34a6aa53948a72e4753f55 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 65 81 2.4E-14 T 21-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VFU_RS02630 cf5a0d14ba34a6aa53948a72e4753f55 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 217 241 2.4E-14 T 21-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VFU_RS02630 cf5a0d14ba34a6aa53948a72e4753f55 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 185 206 2.4E-14 T 21-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VFU_RS02630 cf5a0d14ba34a6aa53948a72e4753f55 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 89 105 2.4E-14 T 21-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VFU_RS02630 cf5a0d14ba34a6aa53948a72e4753f55 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 43 63 2.4E-14 T 21-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VFU_RS02630 cf5a0d14ba34a6aa53948a72e4753f55 275 Gene3D G3DSA:3.30.540.10 6 162 7.2E-45 T 21-04-2016 VFU_RS02630 cf5a0d14ba34a6aa53948a72e4753f55 275 PANTHER PTHR20854:SF5 1 273 7.4E-92 T 21-04-2016 VFU_RS02630 cf5a0d14ba34a6aa53948a72e4753f55 275 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 10 260 6.9E-108 T 21-04-2016 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 VFU_RS02630 cf5a0d14ba34a6aa53948a72e4753f55 275 PANTHER PTHR20854 1 273 7.4E-92 T 21-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VFU_RS02630 cf5a0d14ba34a6aa53948a72e4753f55 275 Gene3D G3DSA:3.40.190.80 163 263 9.8E-36 T 21-04-2016 VFU_RS02630 cf5a0d14ba34a6aa53948a72e4753f55 275 SUPERFAMILY SSF56655 6 272 1.44E-77 T 21-04-2016 VFU_RS02630 cf5a0d14ba34a6aa53948a72e4753f55 275 Pfam PF00459 Inositol monophosphatase family 14 253 9.6E-51 T 21-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VFU_RS04925 fc077f9620a72b4607a29aeb5d5b6b8e 476 Gene3D G3DSA:3.40.190.10 118 210 1.7E-6 T 21-04-2016 VFU_RS04925 fc077f9620a72b4607a29aeb5d5b6b8e 476 SMART SM00062 39 275 1.7E-10 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VFU_RS04925 fc077f9620a72b4607a29aeb5d5b6b8e 476 PANTHER PTHR21666 277 447 3.6E-24 T 21-04-2016 VFU_RS04925 fc077f9620a72b4607a29aeb5d5b6b8e 476 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 263 1.6E-23 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VFU_RS04925 fc077f9620a72b4607a29aeb5d5b6b8e 476 Gene3D G3DSA:1.10.530.10 292 455 5.5E-34 T 21-04-2016 VFU_RS04925 fc077f9620a72b4607a29aeb5d5b6b8e 476 SUPERFAMILY SSF53955 262 449 3.94E-31 T 21-04-2016 IPR023346 Lysozyme-like domain VFU_RS04925 fc077f9620a72b4607a29aeb5d5b6b8e 476 Pfam PF01464 Transglycosylase SLT domain 299 411 5.2E-16 T 21-04-2016 IPR008258 Transglycosylase SLT domain 1 VFU_RS04925 fc077f9620a72b4607a29aeb5d5b6b8e 476 Gene3D G3DSA:3.40.190.10 230 272 2.9E-20 T 21-04-2016 VFU_RS04925 fc077f9620a72b4607a29aeb5d5b6b8e 476 Gene3D G3DSA:3.40.190.10 35 117 2.9E-20 T 21-04-2016 VFU_RS04925 fc077f9620a72b4607a29aeb5d5b6b8e 476 SUPERFAMILY SSF53850 35 272 8.15E-34 T 21-04-2016 VFU_RS00770 bb863fd9119d56b8f46ca1ef8c25d28b 335 Gene3D G3DSA:3.40.50.2000 155 328 1.2E-56 T 21-04-2016 VFU_RS00770 bb863fd9119d56b8f46ca1ef8c25d28b 335 PANTHER PTHR30160:SF7 1 329 4.7E-87 T 21-04-2016 VFU_RS00770 bb863fd9119d56b8f46ca1ef8c25d28b 335 PANTHER PTHR30160 1 329 4.7E-87 T 21-04-2016 VFU_RS00770 bb863fd9119d56b8f46ca1ef8c25d28b 335 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 1 328 3.4E-138 T 21-04-2016 IPR011910 Lipopolysaccharide heptosyltransferase II GO:0009103|GO:0016757 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 VFU_RS00770 bb863fd9119d56b8f46ca1ef8c25d28b 335 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 56 311 7.2E-72 T 21-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 VFU_RS00770 bb863fd9119d56b8f46ca1ef8c25d28b 335 SUPERFAMILY SSF53756 1 329 1.24E-88 T 21-04-2016 VFU_RS00770 bb863fd9119d56b8f46ca1ef8c25d28b 335 Gene3D G3DSA:3.40.50.2000 1 127 2.0E-43 T 21-04-2016 VFU_RS10285 f5d15cf13f64bdd640c9370b8bd5438a 180 PIRSF PIRSF006135 2 179 3.0E-54 T 21-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 VFU_RS10285 f5d15cf13f64bdd640c9370b8bd5438a 180 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 5 176 2.1E-57 T 21-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 VFU_RS10285 f5d15cf13f64bdd640c9370b8bd5438a 180 SUPERFAMILY SSF52540 3 177 5.0E-52 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS10285 f5d15cf13f64bdd640c9370b8bd5438a 180 Gene3D G3DSA:3.40.50.300 3 177 9.2E-61 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS10285 f5d15cf13f64bdd640c9370b8bd5438a 180 PANTHER PTHR34848 3 179 3.3E-68 T 21-04-2016 VFU_RS08950 9d1e4dbf58f1472945fa4e29171d140a 215 SUPERFAMILY SSF47616 85 213 1.85E-31 T 21-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like VFU_RS08950 9d1e4dbf58f1472945fa4e29171d140a 215 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 83 9.7E-17 T 21-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VFU_RS08950 9d1e4dbf58f1472945fa4e29171d140a 215 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 5 214 7.7E-91 T 21-04-2016 IPR005955 Maleylacetoacetate isomerase GO:0003824|GO:0005737|GO:0009072 VFU_RS08950 9d1e4dbf58f1472945fa4e29171d140a 215 PANTHER PTHR11260 1 215 1.5E-105 T 21-04-2016 VFU_RS08950 9d1e4dbf58f1472945fa4e29171d140a 215 Gene3D G3DSA:3.40.30.10 6 83 2.3E-27 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS08950 9d1e4dbf58f1472945fa4e29171d140a 215 Gene3D G3DSA:1.20.1050.10 89 214 2.5E-50 T 21-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like VFU_RS08950 9d1e4dbf58f1472945fa4e29171d140a 215 SUPERFAMILY SSF52833 4 89 2.78E-23 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS08950 9d1e4dbf58f1472945fa4e29171d140a 215 PANTHER PTHR11260:SF289 1 215 1.5E-105 T 21-04-2016 VFU_RS08950 9d1e4dbf58f1472945fa4e29171d140a 215 Pfam PF14497 Glutathione S-transferase, C-terminal domain 125 202 3.7E-6 T 21-04-2016 IPR004046 Glutathione S-transferase, C-terminal VFU_RS00665 8a172918d5f5ab757821688c453c6dd7 183 Gene3D G3DSA:3.40.50.2000 9 129 5.8E-21 T 21-04-2016 VFU_RS00665 8a172918d5f5ab757821688c453c6dd7 183 Pfam PF00534 Glycosyl transferases group 1 8 128 8.5E-25 T 21-04-2016 IPR001296 Glycosyl transferase, family 1 VFU_RS00665 8a172918d5f5ab757821688c453c6dd7 183 SUPERFAMILY SSF53756 4 180 2.42E-38 T 21-04-2016 VFU_RS00665 8a172918d5f5ab757821688c453c6dd7 183 PANTHER PTHR12526 5 179 1.4E-30 T 21-04-2016 VFU_RS07830 a964e934d0b7f219c29ca3f51fc3c67b 357 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 5 164 3.4E-79 T 21-04-2016 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15|UniPathway: UPA00031|UniPathway: UPA00031 VFU_RS07830 a964e934d0b7f219c29ca3f51fc3c67b 357 PANTHER PTHR23133 165 357 7.7E-177 T 21-04-2016 VFU_RS07830 a964e934d0b7f219c29ca3f51fc3c67b 357 SUPERFAMILY SSF54211 169 253 3.41E-33 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VFU_RS07830 a964e934d0b7f219c29ca3f51fc3c67b 357 Pfam PF08645 Polynucleotide kinase 3 phosphatase 6 132 4.5E-6 T 21-04-2016 IPR013954 Polynucleotide kinase 3 phosphatase VFU_RS07830 a964e934d0b7f219c29ca3f51fc3c67b 357 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 147 5.1E-48 T 21-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 VFU_RS07830 a964e934d0b7f219c29ca3f51fc3c67b 357 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 4 357 55.878 T 21-04-2016 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15|UniPathway: UPA00031|UniPathway: UPA00031 VFU_RS07830 a964e934d0b7f219c29ca3f51fc3c67b 357 PANTHER PTHR23133:SF2 12 99 7.7E-177 T 21-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 VFU_RS07830 a964e934d0b7f219c29ca3f51fc3c67b 357 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 321 333 - T 21-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 VFU_RS07830 a964e934d0b7f219c29ca3f51fc3c67b 357 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 169 357 38.341 T 21-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 VFU_RS07830 a964e934d0b7f219c29ca3f51fc3c67b 357 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 6 151 3.6E-28 T 21-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA VFU_RS07830 a964e934d0b7f219c29ca3f51fc3c67b 357 Gene3D G3DSA:3.30.230.40 169 255 1.1E-38 T 21-04-2016 VFU_RS07830 a964e934d0b7f219c29ca3f51fc3c67b 357 Gene3D G3DSA:3.30.230.40 259 357 1.2E-31 T 21-04-2016 VFU_RS07830 a964e934d0b7f219c29ca3f51fc3c67b 357 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 198 339 1.8E-66 T 21-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 VFU_RS07830 a964e934d0b7f219c29ca3f51fc3c67b 357 SUPERFAMILY SSF54211 254 344 1.39E-31 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VFU_RS07830 a964e934d0b7f219c29ca3f51fc3c67b 357 Gene3D G3DSA:3.40.50.1000 3 160 4.9E-43 T 21-04-2016 IPR023214 HAD-like domain VFU_RS07830 a964e934d0b7f219c29ca3f51fc3c67b 357 PANTHER PTHR23133 12 99 7.7E-177 T 21-04-2016 VFU_RS07830 a964e934d0b7f219c29ca3f51fc3c67b 357 PANTHER PTHR23133:SF2 165 357 7.7E-177 T 21-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 VFU_RS07830 a964e934d0b7f219c29ca3f51fc3c67b 357 SUPERFAMILY SSF56784 4 159 5.51E-40 T 21-04-2016 IPR023214 HAD-like domain VFU_RS07830 a964e934d0b7f219c29ca3f51fc3c67b 357 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 228 241 - T 21-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 VFU_RS00585 6dc8835bfbfc04e4d4754a00da364ed7 182 Gene3D G3DSA:2.60.120.10 1 179 1.2E-81 T 21-04-2016 IPR014710 RmlC-like jelly roll fold VFU_RS00585 6dc8835bfbfc04e4d4754a00da364ed7 182 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 176 9.1E-73 T 21-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 VFU_RS00585 6dc8835bfbfc04e4d4754a00da364ed7 182 PANTHER PTHR21047 1 181 1.3E-74 T 21-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 VFU_RS00585 6dc8835bfbfc04e4d4754a00da364ed7 182 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 178 1.8E-77 T 21-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 VFU_RS00585 6dc8835bfbfc04e4d4754a00da364ed7 182 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 181 8.0E-65 T 21-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 VFU_RS00585 6dc8835bfbfc04e4d4754a00da364ed7 182 SUPERFAMILY SSF51182 1 179 8.36E-76 T 21-04-2016 IPR011051 RmlC-like cupin domain VFU_RS00445 06399839390957f39946d3019de74f25 282 Pfam PF12833 Helix-turn-helix domain 201 278 7.8E-22 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VFU_RS00445 06399839390957f39946d3019de74f25 282 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 232 274 - T 21-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VFU_RS00445 06399839390957f39946d3019de74f25 282 SUPERFAMILY SSF46689 231 280 3.94E-14 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS00445 06399839390957f39946d3019de74f25 282 SUPERFAMILY SSF51182 44 101 1.88E-6 T 21-04-2016 IPR011051 RmlC-like cupin domain VFU_RS00445 06399839390957f39946d3019de74f25 282 SMART SM00342 195 278 3.4E-31 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VFU_RS00445 06399839390957f39946d3019de74f25 282 PANTHER PTHR11019 22 282 2.7E-60 T 21-04-2016 VFU_RS00445 06399839390957f39946d3019de74f25 282 Gene3D G3DSA:1.10.10.60 232 280 1.2E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS00445 06399839390957f39946d3019de74f25 282 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 262 278 1.8E-7 T 21-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VFU_RS00445 06399839390957f39946d3019de74f25 282 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 247 262 1.8E-7 T 21-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VFU_RS00445 06399839390957f39946d3019de74f25 282 PANTHER PTHR11019:SF11 22 282 2.7E-60 T 21-04-2016 VFU_RS00445 06399839390957f39946d3019de74f25 282 Gene3D G3DSA:1.10.10.60 174 231 1.0E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS00445 06399839390957f39946d3019de74f25 282 Gene3D G3DSA:2.60.120.10 45 80 3.7E-4 T 21-04-2016 IPR014710 RmlC-like jelly roll fold VFU_RS00445 06399839390957f39946d3019de74f25 282 SUPERFAMILY SSF46689 181 228 3.67E-7 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS14355 81bdf9770b40329409cbada3104d84e0 353 PANTHER PTHR22939:SF93 1 350 6.5E-161 T 21-04-2016 VFU_RS14355 81bdf9770b40329409cbada3104d84e0 353 Pfam PF13365 Trypsin-like peptidase domain 81 215 2.0E-31 T 21-04-2016 VFU_RS14355 81bdf9770b40329409cbada3104d84e0 353 PRINTS PR00834 HtrA/DegQ protease family signature 151 175 1.9E-46 T 21-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VFU_RS14355 81bdf9770b40329409cbada3104d84e0 353 PRINTS PR00834 HtrA/DegQ protease family signature 90 102 1.9E-46 T 21-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VFU_RS14355 81bdf9770b40329409cbada3104d84e0 353 PRINTS PR00834 HtrA/DegQ protease family signature 186 203 1.9E-46 T 21-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VFU_RS14355 81bdf9770b40329409cbada3104d84e0 353 PRINTS PR00834 HtrA/DegQ protease family signature 111 131 1.9E-46 T 21-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VFU_RS14355 81bdf9770b40329409cbada3104d84e0 353 PRINTS PR00834 HtrA/DegQ protease family signature 208 225 1.9E-46 T 21-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VFU_RS14355 81bdf9770b40329409cbada3104d84e0 353 PRINTS PR00834 HtrA/DegQ protease family signature 296 308 1.9E-46 T 21-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VFU_RS14355 81bdf9770b40329409cbada3104d84e0 353 Gene3D G3DSA:2.40.10.10 148 257 9.2E-39 T 21-04-2016 VFU_RS14355 81bdf9770b40329409cbada3104d84e0 353 Gene3D G3DSA:2.40.10.10 34 140 4.7E-34 T 21-04-2016 VFU_RS14355 81bdf9770b40329409cbada3104d84e0 353 SUPERFAMILY SSF50156 239 346 2.76E-21 T 21-04-2016 IPR001478 PDZ domain GO:0005515 VFU_RS14355 81bdf9770b40329409cbada3104d84e0 353 SMART SM00228 256 338 9.6E-8 T 21-04-2016 IPR001478 PDZ domain GO:0005515 VFU_RS14355 81bdf9770b40329409cbada3104d84e0 353 PANTHER PTHR22939 1 350 6.5E-161 T 21-04-2016 VFU_RS14355 81bdf9770b40329409cbada3104d84e0 353 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 2 351 5.0E-174 T 21-04-2016 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 VFU_RS14355 81bdf9770b40329409cbada3104d84e0 353 SUPERFAMILY SSF50494 42 265 4.05E-62 T 21-04-2016 IPR009003 Peptidase S1, PA clan VFU_RS14355 81bdf9770b40329409cbada3104d84e0 353 Pfam PF13180 PDZ domain 257 346 1.6E-15 T 21-04-2016 IPR001478 PDZ domain GO:0005515 VFU_RS14355 81bdf9770b40329409cbada3104d84e0 353 Gene3D G3DSA:2.30.42.10 258 351 1.5E-23 T 21-04-2016 IPR001478 PDZ domain GO:0005515 VFU_RS14615 fe8e45120d44fcad7cf37db81001a556 401 SUPERFAMILY SSF56349 111 387 3.24E-61 T 21-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VFU_RS14615 fe8e45120d44fcad7cf37db81001a556 401 Pfam PF13356 Domain of unknown function (DUF4102) 15 105 1.2E-12 T 21-04-2016 IPR025166 Domain of unknown function DUF4102 VFU_RS14615 fe8e45120d44fcad7cf37db81001a556 401 Gene3D G3DSA:1.10.150.130 113 208 4.4E-17 T 21-04-2016 IPR023109 Integrase/recombinase, N-terminal VFU_RS14615 fe8e45120d44fcad7cf37db81001a556 401 Pfam PF00589 Phage integrase family 215 381 2.4E-25 T 21-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VFU_RS14615 fe8e45120d44fcad7cf37db81001a556 401 PANTHER PTHR30629 28 396 1.2E-42 T 21-04-2016 VFU_RS14615 fe8e45120d44fcad7cf37db81001a556 401 PANTHER PTHR30629:SF2 28 396 1.2E-42 T 21-04-2016 VFU_RS14615 fe8e45120d44fcad7cf37db81001a556 401 Gene3D G3DSA:1.10.443.10 214 388 1.8E-37 T 21-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VFU_RS08525 d71a4a0c49a83d4e0ec2daca43bdd84b 877 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 839 0.0 T 21-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VFU_RS08525 d71a4a0c49a83d4e0ec2daca43bdd84b 877 SUPERFAMILY SSF56719 30 520 1.57E-187 T 21-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 VFU_RS08525 d71a4a0c49a83d4e0ec2daca43bdd84b 877 Gene3D G3DSA:3.30.1360.40 236 332 5.0E-40 T 21-04-2016 IPR024946 Arginine repressor C-terminal-like domain VFU_RS08525 d71a4a0c49a83d4e0ec2daca43bdd84b 877 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 843 30.286 T 21-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VFU_RS08525 d71a4a0c49a83d4e0ec2daca43bdd84b 877 Gene3D G3DSA:3.90.199.10 34 216 2.4E-85 T 21-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 VFU_RS08525 d71a4a0c49a83d4e0ec2daca43bdd84b 877 Gene3D G3DSA:2.120.10.90 530 839 1.7E-140 T 21-04-2016 VFU_RS08525 d71a4a0c49a83d4e0ec2daca43bdd84b 877 Gene3D G3DSA:1.10.268.10 362 496 7.5E-50 T 21-04-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS08525 d71a4a0c49a83d4e0ec2daca43bdd84b 877 PANTHER PTHR10169 2 417 0.0 T 21-04-2016 VFU_RS08525 d71a4a0c49a83d4e0ec2daca43bdd84b 877 PANTHER PTHR10169 449 811 0.0 T 21-04-2016 VFU_RS08525 d71a4a0c49a83d4e0ec2daca43bdd84b 877 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 505 4.1E-158 T 21-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS08525 d71a4a0c49a83d4e0ec2daca43bdd84b 877 SUPERFAMILY SSF101904 532 852 2.75E-113 T 21-04-2016 VFU_RS08525 d71a4a0c49a83d4e0ec2daca43bdd84b 877 PANTHER PTHR10169:SF48 2 417 0.0 T 21-04-2016 VFU_RS08525 d71a4a0c49a83d4e0ec2daca43bdd84b 877 PANTHER PTHR10169:SF48 449 811 0.0 T 21-04-2016 VFU_RS08525 d71a4a0c49a83d4e0ec2daca43bdd84b 877 SMART SM00434 11 498 4.9E-301 T 21-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS08525 d71a4a0c49a83d4e0ec2daca43bdd84b 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 742 786 4.2E-13 T 21-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VFU_RS08525 d71a4a0c49a83d4e0ec2daca43bdd84b 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 736 1.1E-14 T 21-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VFU_RS08525 d71a4a0c49a83d4e0ec2daca43bdd84b 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 636 7.7E-11 T 21-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VFU_RS08525 d71a4a0c49a83d4e0ec2daca43bdd84b 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 792 838 1.7E-12 T 21-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VFU_RS08525 d71a4a0c49a83d4e0ec2daca43bdd84b 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 644 688 3.8E-9 T 21-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VFU_RS08525 d71a4a0c49a83d4e0ec2daca43bdd84b 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 583 2.5E-8 T 21-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VFU_RS09295 00655fef4246fbebe8c265da6eeda544 790 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 272 786 1.2E-124 T 21-04-2016 VFU_RS09295 00655fef4246fbebe8c265da6eeda544 790 Gene3D G3DSA:3.30.70.100 89 159 7.2E-18 T 21-04-2016 VFU_RS09295 00655fef4246fbebe8c265da6eeda544 790 ProSitePatterns PS01229 Hypothetical cof family signature 2. 682 704 - T 21-04-2016 VFU_RS09295 00655fef4246fbebe8c265da6eeda544 790 Pfam PF00403 Heavy-metal-associated domain 93 154 3.8E-11 T 21-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VFU_RS09295 00655fef4246fbebe8c265da6eeda544 790 SUPERFAMILY SSF81665 250 306 1.7E-11 T 21-04-2016 VFU_RS09295 00655fef4246fbebe8c265da6eeda544 790 SUPERFAMILY SSF81665 404 495 1.7E-11 T 21-04-2016 VFU_RS09295 00655fef4246fbebe8c265da6eeda544 790 SUPERFAMILY SSF81665 727 761 1.7E-11 T 21-04-2016 VFU_RS09295 00655fef4246fbebe8c265da6eeda544 790 SUPERFAMILY SSF56784 500 519 4.3E-49 T 21-04-2016 IPR023214 HAD-like domain VFU_RS09295 00655fef4246fbebe8c265da6eeda544 790 SUPERFAMILY SSF56784 554 782 4.3E-49 T 21-04-2016 IPR023214 HAD-like domain VFU_RS09295 00655fef4246fbebe8c265da6eeda544 790 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 245 784 6.3E-163 T 21-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 VFU_RS09295 00655fef4246fbebe8c265da6eeda544 790 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 228 784 1.3E-155 T 21-04-2016 VFU_RS09295 00655fef4246fbebe8c265da6eeda544 790 Gene3D G3DSA:3.40.50.1000 603 751 1.8E-46 T 21-04-2016 IPR023214 HAD-like domain VFU_RS09295 00655fef4246fbebe8c265da6eeda544 790 Gene3D G3DSA:3.40.50.1000 475 517 1.8E-46 T 21-04-2016 IPR023214 HAD-like domain VFU_RS09295 00655fef4246fbebe8c265da6eeda544 790 Pfam PF00122 E1-E2 ATPase 278 492 3.2E-54 T 21-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 VFU_RS09295 00655fef4246fbebe8c265da6eeda544 790 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 4 86 5.5E-28 T 21-04-2016 IPR021993 Putative metal-binding domain of cation transport ATPase VFU_RS09295 00655fef4246fbebe8c265da6eeda544 790 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 279 762 9.7E-76 T 21-04-2016 IPR001757 P-type ATPase GO:0016021 VFU_RS09295 00655fef4246fbebe8c265da6eeda544 790 SUPERFAMILY SSF55008 85 162 1.18E-18 T 21-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VFU_RS09295 00655fef4246fbebe8c265da6eeda544 790 PANTHER PTHR24093 90 784 1.2E-190 T 21-04-2016 VFU_RS09295 00655fef4246fbebe8c265da6eeda544 790 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 503 509 - T 21-04-2016 IPR018303 P-type ATPase, phosphorylation site VFU_RS09295 00655fef4246fbebe8c265da6eeda544 790 PANTHER PTHR24093:SF50 90 784 1.2E-190 T 21-04-2016 VFU_RS09295 00655fef4246fbebe8c265da6eeda544 790 PRINTS PR00943 Copper-transporting ATPase signature 135 155 1.2E-5 T 21-04-2016 VFU_RS09295 00655fef4246fbebe8c265da6eeda544 790 PRINTS PR00943 Copper-transporting ATPase signature 276 295 1.2E-5 T 21-04-2016 VFU_RS09295 00655fef4246fbebe8c265da6eeda544 790 PRINTS PR00943 Copper-transporting ATPase signature 660 677 1.2E-5 T 21-04-2016 VFU_RS09295 00655fef4246fbebe8c265da6eeda544 790 PRINTS PR00943 Copper-transporting ATPase signature 296 314 1.2E-5 T 21-04-2016 VFU_RS09295 00655fef4246fbebe8c265da6eeda544 790 SUPERFAMILY SSF81653 318 402 2.62E-23 T 21-04-2016 VFU_RS09295 00655fef4246fbebe8c265da6eeda544 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 682 701 1.4E-26 T 21-04-2016 VFU_RS09295 00655fef4246fbebe8c265da6eeda544 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 705 717 1.4E-26 T 21-04-2016 VFU_RS09295 00655fef4246fbebe8c265da6eeda544 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 630 640 1.4E-26 T 21-04-2016 VFU_RS09295 00655fef4246fbebe8c265da6eeda544 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 353 367 1.4E-26 T 21-04-2016 VFU_RS09295 00655fef4246fbebe8c265da6eeda544 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 501 515 1.4E-26 T 21-04-2016 VFU_RS09295 00655fef4246fbebe8c265da6eeda544 790 Pfam PF00702 haloacid dehalogenase-like hydrolase 497 695 6.1E-32 T 21-04-2016 VFU_RS09295 00655fef4246fbebe8c265da6eeda544 790 Gene3D G3DSA:2.70.150.10 252 402 7.9E-24 T 21-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 VFU_RS03715 a1303f34cadeae141d0aa79ba57690c9 969 Gene3D G3DSA:3.40.50.300 486 608 7.9E-21 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS03715 a1303f34cadeae141d0aa79ba57690c9 969 PANTHER PTHR10799:SF610 800 841 6.0E-259 T 21-04-2016 VFU_RS03715 a1303f34cadeae141d0aa79ba57690c9 969 PANTHER PTHR10799:SF610 874 950 6.0E-259 T 21-04-2016 VFU_RS03715 a1303f34cadeae141d0aa79ba57690c9 969 PANTHER PTHR10799:SF610 150 354 6.0E-259 T 21-04-2016 VFU_RS03715 a1303f34cadeae141d0aa79ba57690c9 969 PANTHER PTHR10799:SF610 1 9 6.0E-259 T 21-04-2016 VFU_RS03715 a1303f34cadeae141d0aa79ba57690c9 969 PANTHER PTHR10799:SF610 395 695 6.0E-259 T 21-04-2016 VFU_RS03715 a1303f34cadeae141d0aa79ba57690c9 969 SUPERFAMILY SSF52540 115 375 1.2E-36 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS03715 a1303f34cadeae141d0aa79ba57690c9 969 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 967 72.084 T 21-04-2016 IPR023949 RNA polymerase-associated protein RapA GO:0006355 VFU_RS03715 a1303f34cadeae141d0aa79ba57690c9 969 SMART SM00490 519 603 5.1E-17 T 21-04-2016 IPR001650 Helicase, C-terminal VFU_RS03715 a1303f34cadeae141d0aa79ba57690c9 969 SUPERFAMILY SSF52540 273 337 4.35E-43 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS03715 a1303f34cadeae141d0aa79ba57690c9 969 PANTHER PTHR10799 800 841 6.0E-259 T 21-04-2016 VFU_RS03715 a1303f34cadeae141d0aa79ba57690c9 969 PANTHER PTHR10799 874 950 6.0E-259 T 21-04-2016 VFU_RS03715 a1303f34cadeae141d0aa79ba57690c9 969 PANTHER PTHR10799 150 354 6.0E-259 T 21-04-2016 VFU_RS03715 a1303f34cadeae141d0aa79ba57690c9 969 PANTHER PTHR10799 1 9 6.0E-259 T 21-04-2016 VFU_RS03715 a1303f34cadeae141d0aa79ba57690c9 969 PANTHER PTHR10799 395 695 6.0E-259 T 21-04-2016 VFU_RS03715 a1303f34cadeae141d0aa79ba57690c9 969 Gene3D G3DSA:3.40.50.300 164 318 2.5E-16 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS03715 a1303f34cadeae141d0aa79ba57690c9 969 Pfam PF00271 Helicase conserved C-terminal domain 494 603 9.7E-15 T 21-04-2016 IPR001650 Helicase, C-terminal VFU_RS03715 a1303f34cadeae141d0aa79ba57690c9 969 SMART SM00487 150 342 7.4E-17 T 21-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VFU_RS03715 a1303f34cadeae141d0aa79ba57690c9 969 Pfam PF00176 SNF2 family N-terminal domain 174 345 1.1E-15 T 21-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 VFU_RS03715 a1303f34cadeae141d0aa79ba57690c9 969 Pfam PF12137 RNA polymerase recycling family C-terminal 607 966 5.1E-150 T 21-04-2016 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 VFU_RS03715 a1303f34cadeae141d0aa79ba57690c9 969 SUPERFAMILY SSF52540 482 650 4.35E-43 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS13245 1643a1c6869285db353cdc0c409cfe3b 424 PANTHER PTHR11958:SF44 1 408 1.5E-122 T 21-04-2016 VFU_RS13245 1643a1c6869285db353cdc0c409cfe3b 424 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 4.0E-38 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VFU_RS13245 1643a1c6869285db353cdc0c409cfe3b 424 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 4.0E-38 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VFU_RS13245 1643a1c6869285db353cdc0c409cfe3b 424 PRINTS PR00173 Glutamate-aspartate symporter signature 359 379 4.0E-38 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VFU_RS13245 1643a1c6869285db353cdc0c409cfe3b 424 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 4.0E-38 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VFU_RS13245 1643a1c6869285db353cdc0c409cfe3b 424 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 4.0E-38 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VFU_RS13245 1643a1c6869285db353cdc0c409cfe3b 424 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 4.0E-38 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VFU_RS13245 1643a1c6869285db353cdc0c409cfe3b 424 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 4.0E-38 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VFU_RS13245 1643a1c6869285db353cdc0c409cfe3b 424 PRINTS PR00173 Glutamate-aspartate symporter signature 148 170 4.0E-38 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VFU_RS13245 1643a1c6869285db353cdc0c409cfe3b 424 PANTHER PTHR11958 1 408 1.5E-122 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VFU_RS13245 1643a1c6869285db353cdc0c409cfe3b 424 Pfam PF00375 Sodium:dicarboxylate symporter family 6 404 3.1E-113 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VFU_RS13245 1643a1c6869285db353cdc0c409cfe3b 424 Gene3D G3DSA:1.10.3860.10 3 409 1.7E-107 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VFU_RS13245 1643a1c6869285db353cdc0c409cfe3b 424 SUPERFAMILY SSF118215 5 406 5.89E-104 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VFU_RS01470 31ee3e5a6ad4fa4e0b9819ce30399104 481 PANTHER PTHR32024 1 481 0.0 T 21-04-2016 VFU_RS01470 31ee3e5a6ad4fa4e0b9819ce30399104 481 PANTHER PTHR32024:SF3 1 481 0.0 T 21-04-2016 VFU_RS01470 31ee3e5a6ad4fa4e0b9819ce30399104 481 PIRSF PIRSF006247 1 481 5.0E-167 T 21-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 VFU_RS01470 31ee3e5a6ad4fa4e0b9819ce30399104 481 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 464 7.2E-112 T 21-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 VFU_RS01470 31ee3e5a6ad4fa4e0b9819ce30399104 481 Pfam PF02386 Cation transport protein 49 475 6.1E-49 T 21-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 VFU_RS01810 b0780c68c3988836e5223c7dbd0a5110 453 Gene3D G3DSA:2.160.10.10 242 321 1.4E-19 T 21-04-2016 VFU_RS01810 b0780c68c3988836e5223c7dbd0a5110 453 PANTHER PTHR22572 4 446 9.6E-227 T 21-04-2016 VFU_RS01810 b0780c68c3988836e5223c7dbd0a5110 453 Gene3D G3DSA:2.160.10.10 322 451 1.8E-34 T 21-04-2016 VFU_RS01810 b0780c68c3988836e5223c7dbd0a5110 453 Gene3D G3DSA:3.90.550.10 1 241 8.5E-70 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VFU_RS01810 b0780c68c3988836e5223c7dbd0a5110 453 Pfam PF12804 MobA-like NTP transferase domain 5 122 1.2E-22 T 21-04-2016 IPR025877 MobA-like NTP transferase VFU_RS01810 b0780c68c3988836e5223c7dbd0a5110 453 PANTHER PTHR22572:SF115 4 446 9.6E-227 T 21-04-2016 VFU_RS01810 b0780c68c3988836e5223c7dbd0a5110 453 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 449 42.767 T 21-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 VFU_RS01810 b0780c68c3988836e5223c7dbd0a5110 453 SUPERFAMILY SSF51161 252 434 2.7E-50 T 21-04-2016 IPR011004 Trimeric LpxA-like VFU_RS01810 b0780c68c3988836e5223c7dbd0a5110 453 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 451 2.8E-205 T 21-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 VFU_RS01810 b0780c68c3988836e5223c7dbd0a5110 453 SUPERFAMILY SSF53448 1 249 2.29E-64 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VFU_RS01810 b0780c68c3988836e5223c7dbd0a5110 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 314 348 2.0E-5 T 21-04-2016 IPR001451 Hexapeptide repeat VFU_RS01810 b0780c68c3988836e5223c7dbd0a5110 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 266 295 2.5E-4 T 21-04-2016 IPR001451 Hexapeptide repeat VFU_RS01810 b0780c68c3988836e5223c7dbd0a5110 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 392 426 1.3E-7 T 21-04-2016 IPR001451 Hexapeptide repeat VFU_RS01810 b0780c68c3988836e5223c7dbd0a5110 453 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 400 428 - T 21-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 VFU_RS03110 2f4bae41b00b5e35cd72afbf3c81f97b 196 Pfam PF05137 Fimbrial assembly protein (PilN) 103 177 1.3E-13 T 21-04-2016 IPR007813 Fimbrial assembly PilN VFU_RS03110 2f4bae41b00b5e35cd72afbf3c81f97b 196 PANTHER PTHR40278:SF1 1 196 3.9E-45 T 21-04-2016 VFU_RS03110 2f4bae41b00b5e35cd72afbf3c81f97b 196 PANTHER PTHR40278 1 196 3.9E-45 T 21-04-2016 VFU_RS15250 dc85e593564e9764c550abce05f122b9 1226 Pfam PF02574 Homocysteine S-methyltransferase 18 326 6.2E-93 T 21-04-2016 IPR003726 Homocysteine-binding domain VFU_RS15250 dc85e593564e9764c550abce05f122b9 1226 SUPERFAMILY SSF51717 357 631 1.57E-87 T 21-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 VFU_RS15250 dc85e593564e9764c550abce05f122b9 1226 TIGRFAM TIGR02082 metH: methionine synthase 13 1194 0.0 T 21-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 VFU_RS15250 dc85e593564e9764c550abce05f122b9 1226 Gene3D G3DSA:1.10.1240.10 653 737 2.1E-39 T 21-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain VFU_RS15250 dc85e593564e9764c550abce05f122b9 1226 Gene3D G3DSA:3.40.50.280 746 896 2.1E-65 T 21-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 VFU_RS15250 dc85e593564e9764c550abce05f122b9 1226 PIRSF PIRSF000381 3 1197 0.0 T 21-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 VFU_RS15250 dc85e593564e9764c550abce05f122b9 1226 Gene3D G3DSA:3.20.20.20 365 637 7.5E-114 T 21-04-2016 IPR000489 Pterin-binding domain GO:0042558 VFU_RS15250 dc85e593564e9764c550abce05f122b9 1226 Gene3D G3DSA:3.10.196.10 959 1225 3.0E-108 T 21-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 VFU_RS15250 dc85e593564e9764c550abce05f122b9 1226 Pfam PF02607 B12 binding domain 660 734 9.6E-26 T 21-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain VFU_RS15250 dc85e593564e9764c550abce05f122b9 1226 SUPERFAMILY SSF47644 654 740 2.75E-29 T 21-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain VFU_RS15250 dc85e593564e9764c550abce05f122b9 1226 SUPERFAMILY SSF52242 744 895 2.22E-45 T 21-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 VFU_RS15250 dc85e593564e9764c550abce05f122b9 1226 Gene3D G3DSA:3.20.20.330 4 364 5.8E-127 T 21-04-2016 IPR003726 Homocysteine-binding domain VFU_RS15250 dc85e593564e9764c550abce05f122b9 1226 PANTHER PTHR21091 9 403 7.5E-166 T 21-04-2016 VFU_RS15250 dc85e593564e9764c550abce05f122b9 1226 SUPERFAMILY SSF82282 7 400 6.93E-119 T 21-04-2016 IPR003726 Homocysteine-binding domain VFU_RS15250 dc85e593564e9764c550abce05f122b9 1226 SUPERFAMILY SSF56507 903 1225 1.23E-128 T 21-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 VFU_RS15250 dc85e593564e9764c550abce05f122b9 1226 Pfam PF02310 B12 binding domain 749 842 3.6E-18 T 21-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 VFU_RS15250 dc85e593564e9764c550abce05f122b9 1226 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 940 1210 1.9E-123 T 21-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 VFU_RS15250 dc85e593564e9764c550abce05f122b9 1226 PANTHER PTHR21091:SF111 9 403 7.5E-166 T 21-04-2016 VFU_RS15250 dc85e593564e9764c550abce05f122b9 1226 Pfam PF00809 Pterin binding enzyme 361 599 4.6E-59 T 21-04-2016 IPR000489 Pterin-binding domain GO:0042558 VFU_RS15250 dc85e593564e9764c550abce05f122b9 1226 SMART SM01018 658 741 3.0E-45 T 21-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain VFU_RS13470 0622967347d79dfced3e2aeb91d43019 385 PANTHER PTHR32303:SF8 1 361 4.7E-154 T 21-04-2016 VFU_RS13470 0622967347d79dfced3e2aeb91d43019 385 Gene3D G3DSA:2.140.10.10 5 379 8.5E-73 T 21-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain VFU_RS13470 0622967347d79dfced3e2aeb91d43019 385 PANTHER PTHR32303 1 361 4.7E-154 T 21-04-2016 VFU_RS13470 0622967347d79dfced3e2aeb91d43019 385 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 3 384 41.072 T 21-04-2016 IPR017687 Outer membrane protein assembly factor BamB VFU_RS13470 0622967347d79dfced3e2aeb91d43019 385 SUPERFAMILY SSF50998 40 376 5.49E-81 T 21-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily VFU_RS13470 0622967347d79dfced3e2aeb91d43019 385 SMART SM00564 147 178 0.067 T 21-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VFU_RS13470 0622967347d79dfced3e2aeb91d43019 385 SMART SM00564 63 94 3.6E-6 T 21-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VFU_RS13470 0622967347d79dfced3e2aeb91d43019 385 SMART SM00564 321 353 0.0046 T 21-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VFU_RS13470 0622967347d79dfced3e2aeb91d43019 385 SMART SM00564 243 274 130.0 T 21-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VFU_RS13470 0622967347d79dfced3e2aeb91d43019 385 SMART SM00564 280 312 11.0 T 21-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VFU_RS13470 0622967347d79dfced3e2aeb91d43019 385 SMART SM00564 106 138 0.003 T 21-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VFU_RS13470 0622967347d79dfced3e2aeb91d43019 385 SMART SM00564 192 223 110.0 T 21-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VFU_RS13470 0622967347d79dfced3e2aeb91d43019 385 Pfam PF13360 PQQ-like domain 76 310 1.4E-53 T 21-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat VFU_RS13470 0622967347d79dfced3e2aeb91d43019 385 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 8 382 3.0E-139 T 21-04-2016 IPR017687 Outer membrane protein assembly factor BamB VFU_RS15030 2140c868db596b6df38c4ffa583fc5a7 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 9.3E-41 T 21-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 VFU_RS15030 2140c868db596b6df38c4ffa583fc5a7 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.55 T 21-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS15030 2140c868db596b6df38c4ffa583fc5a7 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 21-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS15030 2140c868db596b6df38c4ffa583fc5a7 103 SUPERFAMILY SSF141091 1 102 4.71E-39 T 21-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 VFU_RS15030 2140c868db596b6df38c4ffa583fc5a7 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 7.4E-45 T 21-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS15030 2140c868db596b6df38c4ffa583fc5a7 103 PANTHER PTHR21349 1 101 4.9E-49 T 21-04-2016 VFU_RS10000 ed13161e0f948a756b4a57df1d671f83 685 SUPERFAMILY SSF52540 362 600 2.56E-72 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS10000 ed13161e0f948a756b4a57df1d671f83 685 SMART SM00382 383 537 1.7E-7 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS10000 ed13161e0f948a756b4a57df1d671f83 685 Gene3D G3DSA:3.30.450.40 254 331 5.5E-6 T 21-04-2016 IPR029016 GAF domain-like VFU_RS10000 ed13161e0f948a756b4a57df1d671f83 685 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 576 585 - T 21-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VFU_RS10000 ed13161e0f948a756b4a57df1d671f83 685 Gene3D G3DSA:1.10.10.60 588 676 2.3E-11 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS10000 ed13161e0f948a756b4a57df1d671f83 685 Gene3D G3DSA:3.40.50.300 360 535 5.1E-56 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS10000 ed13161e0f948a756b4a57df1d671f83 685 Pfam PF00158 Sigma-54 interaction domain 363 529 2.5E-67 T 21-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VFU_RS10000 ed13161e0f948a756b4a57df1d671f83 685 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 387 400 - T 21-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VFU_RS10000 ed13161e0f948a756b4a57df1d671f83 685 PANTHER PTHR32071 294 685 3.8E-138 T 21-04-2016 VFU_RS10000 ed13161e0f948a756b4a57df1d671f83 685 Gene3D G3DSA:1.10.8.60 536 587 4.8E-23 T 21-04-2016 VFU_RS10000 ed13161e0f948a756b4a57df1d671f83 685 SUPERFAMILY SSF55781 256 333 4.58E-7 T 21-04-2016 IPR029016 GAF domain-like VFU_RS12920 b6e2fa6073a5c66549e504890778d605 349 PANTHER PTHR30469 27 347 9.8E-188 T 21-04-2016 VFU_RS12920 b6e2fa6073a5c66549e504890778d605 349 SUPERFAMILY SSF111369 44 261 2.22E-39 T 21-04-2016 VFU_RS12920 b6e2fa6073a5c66549e504890778d605 349 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 31 336 1.1E-88 T 21-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 VFU_RS12920 b6e2fa6073a5c66549e504890778d605 349 Gene3D G3DSA:2.40.50.100 56 89 1.1E-17 T 21-04-2016 VFU_RS12920 b6e2fa6073a5c66549e504890778d605 349 Gene3D G3DSA:2.40.50.100 150 181 1.1E-17 T 21-04-2016 VFU_RS12920 b6e2fa6073a5c66549e504890778d605 349 PANTHER PTHR30469:SF13 27 347 9.8E-188 T 21-04-2016 VFU_RS12920 b6e2fa6073a5c66549e504890778d605 349 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 41 255 6.2E-32 T 21-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VFU_RS07350 e3ddd0f8ac5ed2052c43fd33c2667197 268 PANTHER PTHR20857 12 263 2.6E-68 T 21-04-2016 VFU_RS07350 e3ddd0f8ac5ed2052c43fd33c2667197 268 PIRSF PIRSF000513 5 263 1.2E-88 T 21-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 VFU_RS07350 e3ddd0f8ac5ed2052c43fd33c2667197 268 PANTHER PTHR20857:SF19 12 263 2.6E-68 T 21-04-2016 VFU_RS07350 e3ddd0f8ac5ed2052c43fd33c2667197 268 Pfam PF02110 Hydroxyethylthiazole kinase family 12 251 1.4E-70 T 21-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 VFU_RS07350 e3ddd0f8ac5ed2052c43fd33c2667197 268 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 62 70 3.1E-31 T 21-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 VFU_RS07350 e3ddd0f8ac5ed2052c43fd33c2667197 268 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 88 105 3.1E-31 T 21-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 VFU_RS07350 e3ddd0f8ac5ed2052c43fd33c2667197 268 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 31 52 3.1E-31 T 21-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 VFU_RS07350 e3ddd0f8ac5ed2052c43fd33c2667197 268 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 18 25 3.1E-31 T 21-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 VFU_RS07350 e3ddd0f8ac5ed2052c43fd33c2667197 268 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 119 133 3.1E-31 T 21-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 VFU_RS07350 e3ddd0f8ac5ed2052c43fd33c2667197 268 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 163 180 3.1E-31 T 21-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 VFU_RS07350 e3ddd0f8ac5ed2052c43fd33c2667197 268 SUPERFAMILY SSF53613 6 259 4.75E-56 T 21-04-2016 IPR029056 Ribokinase-like VFU_RS07350 e3ddd0f8ac5ed2052c43fd33c2667197 268 Gene3D G3DSA:3.40.1190.20 7 261 5.8E-77 T 21-04-2016 IPR029056 Ribokinase-like VFU_RS07350 e3ddd0f8ac5ed2052c43fd33c2667197 268 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 12 255 28.749 T 21-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 VFU_RS09520 d9a32176cf7101fa784f42751b21b942 352 PANTHER PTHR21225 1 350 3.4E-262 T 21-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 VFU_RS09520 d9a32176cf7101fa784f42751b21b942 352 Gene3D G3DSA:3.20.20.70 10 350 3.5E-145 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS09520 d9a32176cf7101fa784f42751b21b942 352 PANTHER PTHR21225:SF6 1 350 3.4E-262 T 21-04-2016 VFU_RS09520 d9a32176cf7101fa784f42751b21b942 352 SUPERFAMILY SSF51569 8 349 7.97E-130 T 21-04-2016 VFU_RS09520 d9a32176cf7101fa784f42751b21b942 352 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 350 1.3E-158 T 21-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 VFU_RS09520 d9a32176cf7101fa784f42751b21b942 352 Pfam PF00793 DAHP synthetase I family 44 338 2.0E-98 T 21-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 VFU_RS09520 d9a32176cf7101fa784f42751b21b942 352 PIRSF PIRSF001361 1 352 3.6E-155 T 21-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 VFU_RS01215 4c84f9f5acdd2947dc6c60551f23c99a 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 2.65E-28 T 21-04-2016 VFU_RS01215 4c84f9f5acdd2947dc6c60551f23c99a 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 2.65E-28 T 21-04-2016 VFU_RS01215 4c84f9f5acdd2947dc6c60551f23c99a 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 2.65E-28 T 21-04-2016 VFU_RS01215 4c84f9f5acdd2947dc6c60551f23c99a 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 2.65E-28 T 21-04-2016 VFU_RS01215 4c84f9f5acdd2947dc6c60551f23c99a 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.65E-28 T 21-04-2016 VFU_RS01215 4c84f9f5acdd2947dc6c60551f23c99a 451 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 21-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 VFU_RS01215 4c84f9f5acdd2947dc6c60551f23c99a 451 PANTHER PTHR22912:SF106 1 451 3.3E-248 T 21-04-2016 VFU_RS01215 4c84f9f5acdd2947dc6c60551f23c99a 451 Gene3D G3DSA:3.50.50.60 2 138 3.3E-47 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS01215 4c84f9f5acdd2947dc6c60551f23c99a 451 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 319 1.3E-69 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS01215 4c84f9f5acdd2947dc6c60551f23c99a 451 PANTHER PTHR22912 1 451 3.3E-248 T 21-04-2016 VFU_RS01215 4c84f9f5acdd2947dc6c60551f23c99a 451 SUPERFAMILY SSF51905 1 360 3.53E-56 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS01215 4c84f9f5acdd2947dc6c60551f23c99a 451 SUPERFAMILY SSF55424 337 451 1.63E-33 T 21-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 VFU_RS01215 4c84f9f5acdd2947dc6c60551f23c99a 451 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 4 451 1.7E-211 T 21-04-2016 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081 VFU_RS01215 4c84f9f5acdd2947dc6c60551f23c99a 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 7.57E-65 T 21-04-2016 VFU_RS01215 4c84f9f5acdd2947dc6c60551f23c99a 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 7.57E-65 T 21-04-2016 VFU_RS01215 4c84f9f5acdd2947dc6c60551f23c99a 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 403 418 7.57E-65 T 21-04-2016 VFU_RS01215 4c84f9f5acdd2947dc6c60551f23c99a 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 7.57E-65 T 21-04-2016 VFU_RS01215 4c84f9f5acdd2947dc6c60551f23c99a 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 7.57E-65 T 21-04-2016 VFU_RS01215 4c84f9f5acdd2947dc6c60551f23c99a 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 425 445 7.57E-65 T 21-04-2016 VFU_RS01215 4c84f9f5acdd2947dc6c60551f23c99a 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 7.57E-65 T 21-04-2016 VFU_RS01215 4c84f9f5acdd2947dc6c60551f23c99a 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 336 357 7.57E-65 T 21-04-2016 VFU_RS01215 4c84f9f5acdd2947dc6c60551f23c99a 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 7.57E-65 T 21-04-2016 VFU_RS01215 4c84f9f5acdd2947dc6c60551f23c99a 451 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 340 450 2.7E-31 T 21-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VFU_RS01215 4c84f9f5acdd2947dc6c60551f23c99a 451 Gene3D G3DSA:3.30.390.30 327 451 3.5E-40 T 21-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VFU_RS01215 4c84f9f5acdd2947dc6c60551f23c99a 451 Gene3D G3DSA:3.50.50.60 139 326 6.6E-50 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS01215 4c84f9f5acdd2947dc6c60551f23c99a 451 PIRSF PIRSF000350 1 445 1.8E-80 T 21-04-2016 VFU_RS03095 bbcbadbe9ee4f3a5cdd87ae9f6034ad3 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.8E-7 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS03095 bbcbadbe9ee4f3a5cdd87ae9f6034ad3 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.8E-7 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS03095 bbcbadbe9ee4f3a5cdd87ae9f6034ad3 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.8E-7 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS03095 bbcbadbe9ee4f3a5cdd87ae9f6034ad3 298 Pfam PF03466 LysR substrate binding domain 89 287 9.0E-42 T 21-04-2016 IPR005119 LysR, substrate-binding VFU_RS03095 bbcbadbe9ee4f3a5cdd87ae9f6034ad3 298 PANTHER PTHR30346:SF15 1 286 9.3E-130 T 21-04-2016 VFU_RS03095 bbcbadbe9ee4f3a5cdd87ae9f6034ad3 298 Gene3D G3DSA:1.10.10.10 1 83 2.7E-27 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS03095 bbcbadbe9ee4f3a5cdd87ae9f6034ad3 298 Gene3D G3DSA:3.40.190.10 176 267 1.0E-29 T 21-04-2016 VFU_RS03095 bbcbadbe9ee4f3a5cdd87ae9f6034ad3 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 5.0E-20 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS03095 bbcbadbe9ee4f3a5cdd87ae9f6034ad3 298 PANTHER PTHR30346 1 286 9.3E-130 T 21-04-2016 VFU_RS03095 bbcbadbe9ee4f3a5cdd87ae9f6034ad3 298 Gene3D G3DSA:3.40.190.10 90 175 2.0E-18 T 21-04-2016 VFU_RS03095 bbcbadbe9ee4f3a5cdd87ae9f6034ad3 298 SUPERFAMILY SSF46785 1 86 1.94E-22 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS03095 bbcbadbe9ee4f3a5cdd87ae9f6034ad3 298 SUPERFAMILY SSF53850 89 294 1.93E-36 T 21-04-2016 VFU_RS04140 b8ac3fa1f65358daf5ee5800482d5ad9 741 SMART SM00954 250 360 5.4E-64 T 21-04-2016 IPR007685 RelA/SpoT GO:0015969 VFU_RS04140 b8ac3fa1f65358daf5ee5800482d5ad9 741 SUPERFAMILY SSF81271 396 462 1.29E-20 T 21-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VFU_RS04140 b8ac3fa1f65358daf5ee5800482d5ad9 741 Pfam PF13328 HD domain 57 190 2.9E-38 T 21-04-2016 IPR003607 HD/PDEase domain VFU_RS04140 b8ac3fa1f65358daf5ee5800482d5ad9 741 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 64 739 9.9E-182 T 21-04-2016 IPR004811 RelA/SpoT family GO:0015969 VFU_RS04140 b8ac3fa1f65358daf5ee5800482d5ad9 741 PANTHER PTHR21262 54 741 0.0 T 21-04-2016 VFU_RS04140 b8ac3fa1f65358daf5ee5800482d5ad9 741 PANTHER PTHR21262:SF5 54 741 0.0 T 21-04-2016 VFU_RS04140 b8ac3fa1f65358daf5ee5800482d5ad9 741 Pfam PF02824 TGS domain 403 462 3.7E-21 T 21-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 VFU_RS04140 b8ac3fa1f65358daf5ee5800482d5ad9 741 Pfam PF13291 ACT domain 663 739 8.5E-15 T 21-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 VFU_RS04140 b8ac3fa1f65358daf5ee5800482d5ad9 741 SUPERFAMILY SSF109604 50 205 2.76E-43 T 21-04-2016 VFU_RS04140 b8ac3fa1f65358daf5ee5800482d5ad9 741 SUPERFAMILY SSF81301 195 407 3.76E-61 T 21-04-2016 VFU_RS04140 b8ac3fa1f65358daf5ee5800482d5ad9 741 SUPERFAMILY SSF55021 663 739 5.95E-10 T 21-04-2016 VFU_RS04140 b8ac3fa1f65358daf5ee5800482d5ad9 741 Gene3D G3DSA:3.30.70.260 663 737 6.6E-18 T 21-04-2016 VFU_RS04140 b8ac3fa1f65358daf5ee5800482d5ad9 741 Gene3D G3DSA:3.30.460.10 193 339 1.4E-48 T 21-04-2016 VFU_RS04140 b8ac3fa1f65358daf5ee5800482d5ad9 741 Gene3D G3DSA:3.10.20.30 403 464 8.4E-24 T 21-04-2016 IPR012675 Beta-grasp domain VFU_RS04140 b8ac3fa1f65358daf5ee5800482d5ad9 741 Pfam PF04607 Region found in RelA / SpoT proteins 250 359 1.8E-36 T 21-04-2016 IPR007685 RelA/SpoT GO:0015969 VFU_RS05455 d5c936e666c79705a1274abf64f555ec 916 Pfam PF00702 haloacid dehalogenase-like hydrolase 596 812 6.6E-47 T 21-04-2016 VFU_RS05455 d5c936e666c79705a1274abf64f555ec 916 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 602 608 - T 21-04-2016 IPR018303 P-type ATPase, phosphorylation site VFU_RS05455 d5c936e666c79705a1274abf64f555ec 916 PANTHER PTHR24093:SF319 177 908 0.0 T 21-04-2016 VFU_RS05455 d5c936e666c79705a1274abf64f555ec 916 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 312 908 1.1E-183 T 21-04-2016 VFU_RS05455 d5c936e666c79705a1274abf64f555ec 916 ProSitePatterns PS01047 Heavy-metal-associated domain. 182 211 - T 21-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 VFU_RS05455 d5c936e666c79705a1274abf64f555ec 916 Gene3D G3DSA:2.70.150.10 346 499 2.1E-29 T 21-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 VFU_RS05455 d5c936e666c79705a1274abf64f555ec 916 PANTHER PTHR24093 177 908 0.0 T 21-04-2016 VFU_RS05455 d5c936e666c79705a1274abf64f555ec 916 Gene3D G3DSA:3.40.50.1000 726 866 3.0E-55 T 21-04-2016 IPR023214 HAD-like domain VFU_RS05455 d5c936e666c79705a1274abf64f555ec 916 Gene3D G3DSA:3.40.50.1000 572 616 3.0E-55 T 21-04-2016 IPR023214 HAD-like domain VFU_RS05455 d5c936e666c79705a1274abf64f555ec 916 SUPERFAMILY SSF55008 66 129 1.83E-7 T 21-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VFU_RS05455 d5c936e666c79705a1274abf64f555ec 916 Pfam PF00122 E1-E2 ATPase 369 590 2.3E-59 T 21-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 VFU_RS05455 d5c936e666c79705a1274abf64f555ec 916 SUPERFAMILY SSF56784 598 618 5.34E-58 T 21-04-2016 IPR023214 HAD-like domain VFU_RS05455 d5c936e666c79705a1274abf64f555ec 916 SUPERFAMILY SSF56784 656 904 5.34E-58 T 21-04-2016 IPR023214 HAD-like domain VFU_RS05455 d5c936e666c79705a1274abf64f555ec 916 PRINTS PR00943 Copper-transporting ATPase signature 775 792 5.4E-14 T 21-04-2016 VFU_RS05455 d5c936e666c79705a1274abf64f555ec 916 PRINTS PR00943 Copper-transporting ATPase signature 871 885 5.4E-14 T 21-04-2016 VFU_RS05455 d5c936e666c79705a1274abf64f555ec 916 PRINTS PR00943 Copper-transporting ATPase signature 583 598 5.4E-14 T 21-04-2016 VFU_RS05455 d5c936e666c79705a1274abf64f555ec 916 PRINTS PR00943 Copper-transporting ATPase signature 388 406 5.4E-14 T 21-04-2016 VFU_RS05455 d5c936e666c79705a1274abf64f555ec 916 PRINTS PR00943 Copper-transporting ATPase signature 521 535 5.4E-14 T 21-04-2016 VFU_RS05455 d5c936e666c79705a1274abf64f555ec 916 PRINTS PR00943 Copper-transporting ATPase signature 316 335 5.4E-14 T 21-04-2016 VFU_RS05455 d5c936e666c79705a1274abf64f555ec 916 PRINTS PR00943 Copper-transporting ATPase signature 832 846 5.4E-14 T 21-04-2016 VFU_RS05455 d5c936e666c79705a1274abf64f555ec 916 PRINTS PR00943 Copper-transporting ATPase signature 192 206 5.4E-14 T 21-04-2016 VFU_RS05455 d5c936e666c79705a1274abf64f555ec 916 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 745 755 2.3E-29 T 21-04-2016 VFU_RS05455 d5c936e666c79705a1274abf64f555ec 916 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 821 833 2.3E-29 T 21-04-2016 VFU_RS05455 d5c936e666c79705a1274abf64f555ec 916 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 600 614 2.3E-29 T 21-04-2016 VFU_RS05455 d5c936e666c79705a1274abf64f555ec 916 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 448 462 2.3E-29 T 21-04-2016 VFU_RS05455 d5c936e666c79705a1274abf64f555ec 916 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 723 734 2.3E-29 T 21-04-2016 VFU_RS05455 d5c936e666c79705a1274abf64f555ec 916 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 798 817 2.3E-29 T 21-04-2016 VFU_RS05455 d5c936e666c79705a1274abf64f555ec 916 SUPERFAMILY SSF81653 401 498 3.14E-24 T 21-04-2016 VFU_RS05455 d5c936e666c79705a1274abf64f555ec 916 Gene3D G3DSA:3.40.1110.10 617 725 1.2E-20 T 21-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 VFU_RS05455 d5c936e666c79705a1274abf64f555ec 916 ProSitePatterns PS01229 Hypothetical cof family signature 2. 798 820 - T 21-04-2016 VFU_RS05455 d5c936e666c79705a1274abf64f555ec 916 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 370 876 4.7E-89 T 21-04-2016 IPR001757 P-type ATPase GO:0016021 VFU_RS05455 d5c936e666c79705a1274abf64f555ec 916 Pfam PF00403 Heavy-metal-associated domain 182 238 2.7E-12 T 21-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VFU_RS05455 d5c936e666c79705a1274abf64f555ec 916 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 331 907 2.5E-185 T 21-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 VFU_RS05455 d5c936e666c79705a1274abf64f555ec 916 SUPERFAMILY SSF81665 356 402 1.83E-11 T 21-04-2016 VFU_RS05455 d5c936e666c79705a1274abf64f555ec 916 SUPERFAMILY SSF81665 847 862 1.83E-11 T 21-04-2016 VFU_RS05455 d5c936e666c79705a1274abf64f555ec 916 SUPERFAMILY SSF81665 499 594 1.83E-11 T 21-04-2016 VFU_RS05455 d5c936e666c79705a1274abf64f555ec 916 Gene3D G3DSA:3.30.70.100 178 243 5.1E-23 T 21-04-2016 VFU_RS05455 d5c936e666c79705a1274abf64f555ec 916 Gene3D G3DSA:3.30.70.100 66 128 2.2E-9 T 21-04-2016 VFU_RS05455 d5c936e666c79705a1274abf64f555ec 916 SUPERFAMILY SSF55008 178 244 2.49E-18 T 21-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VFU_RS01205 fe0d21d4d24b1110cbc38fc89e3eaded 680 Gene3D G3DSA:1.10.1370.10 140 349 2.9E-140 T 21-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 VFU_RS01205 fe0d21d4d24b1110cbc38fc89e3eaded 680 Gene3D G3DSA:1.10.1370.10 505 678 2.9E-140 T 21-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 VFU_RS01205 fe0d21d4d24b1110cbc38fc89e3eaded 680 SUPERFAMILY SSF55486 1 677 1.14E-209 T 21-04-2016 VFU_RS01205 fe0d21d4d24b1110cbc38fc89e3eaded 680 PANTHER PTHR11804 2 678 0.0 T 21-04-2016 VFU_RS01205 fe0d21d4d24b1110cbc38fc89e3eaded 680 Gene3D G3DSA:3.40.390.10 360 504 5.3E-59 T 21-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 VFU_RS01205 fe0d21d4d24b1110cbc38fc89e3eaded 680 PANTHER PTHR11804:SF8 2 678 0.0 T 21-04-2016 VFU_RS01205 fe0d21d4d24b1110cbc38fc89e3eaded 680 Gene3D G3DSA:1.20.1050.40 9 138 2.8E-28 T 21-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal VFU_RS01205 fe0d21d4d24b1110cbc38fc89e3eaded 680 Pfam PF01432 Peptidase family M3 222 677 8.0E-163 T 21-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 VFU_RS01405 440fa2735add173783d7c5205b20fff4 276 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 5 273 30.96 T 21-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 VFU_RS01405 440fa2735add173783d7c5205b20fff4 276 Gene3D G3DSA:3.40.192.10 3 110 2.4E-35 T 21-04-2016 VFU_RS01405 440fa2735add173783d7c5205b20fff4 276 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 7 274 9.1E-84 T 21-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 VFU_RS01405 440fa2735add173783d7c5205b20fff4 276 PANTHER PTHR21089:SF2 6 275 3.1E-145 T 21-04-2016 VFU_RS01405 440fa2735add173783d7c5205b20fff4 276 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 10 92 5.9E-23 T 21-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 VFU_RS01405 440fa2735add173783d7c5205b20fff4 276 SUPERFAMILY SSF53223 6 105 1.32E-30 T 21-04-2016 VFU_RS01405 440fa2735add173783d7c5205b20fff4 276 Gene3D G3DSA:3.40.50.720 111 248 5.6E-44 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS01405 440fa2735add173783d7c5205b20fff4 276 PANTHER PTHR21089 6 275 3.1E-145 T 21-04-2016 VFU_RS01405 440fa2735add173783d7c5205b20fff4 276 SUPERFAMILY SSF51735 106 273 1.28E-39 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS01405 440fa2735add173783d7c5205b20fff4 276 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 120 195 1.0E-13 T 21-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase VFU_RS12585 b200ffd5032b97c33f95a217fb6be75d 219 Gene3D G3DSA:3.30.420.10 10 211 1.7E-58 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VFU_RS12585 b200ffd5032b97c33f95a217fb6be75d 219 SUPERFAMILY SSF53098 10 208 4.66E-55 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VFU_RS12585 b200ffd5032b97c33f95a217fb6be75d 219 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 209 5.2E-98 T 21-04-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 VFU_RS12585 b200ffd5032b97c33f95a217fb6be75d 219 Hamap MF_00157 Ribonuclease T [rnt]. 1 219 116.378 T 21-04-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 VFU_RS12585 b200ffd5032b97c33f95a217fb6be75d 219 PANTHER PTHR30231:SF2 8 210 4.7E-114 T 21-04-2016 VFU_RS12585 b200ffd5032b97c33f95a217fb6be75d 219 PANTHER PTHR30231 8 210 4.7E-114 T 21-04-2016 VFU_RS12585 b200ffd5032b97c33f95a217fb6be75d 219 SMART SM00479 18 204 4.6E-29 T 21-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VFU_RS12585 b200ffd5032b97c33f95a217fb6be75d 219 Pfam PF00929 Exonuclease 20 195 9.8E-42 T 21-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VFU_RS13635 bb00cae83b85c01cb671baaa06526bdc 272 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 26 272 1.4E-122 T 21-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 VFU_RS13635 bb00cae83b85c01cb671baaa06526bdc 272 SMART SM00382 50 252 2.3E-15 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS13635 bb00cae83b85c01cb671baaa06526bdc 272 PANTHER PTHR24220 27 271 7.9E-137 T 21-04-2016 VFU_RS13635 bb00cae83b85c01cb671baaa06526bdc 272 SUPERFAMILY SSF52540 22 258 1.54E-60 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS13635 bb00cae83b85c01cb671baaa06526bdc 272 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS13635 bb00cae83b85c01cb671baaa06526bdc 272 Pfam PF00005 ABC transporter 41 197 9.1E-32 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS13635 bb00cae83b85c01cb671baaa06526bdc 272 PANTHER PTHR24220:SF585 27 271 7.9E-137 T 21-04-2016 VFU_RS13635 bb00cae83b85c01cb671baaa06526bdc 272 Gene3D G3DSA:3.40.50.300 19 263 7.0E-69 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS12425 61a7522158fe075ea46cfafe06f4d0bd 432 SMART SM00091 18 89 7.4 T 21-04-2016 IPR000014 PAS domain VFU_RS12425 61a7522158fe075ea46cfafe06f4d0bd 432 SMART SM00091 140 208 0.35 T 21-04-2016 IPR000014 PAS domain VFU_RS12425 61a7522158fe075ea46cfafe06f4d0bd 432 SUPERFAMILY SSF55785 153 256 2.09E-21 T 21-04-2016 IPR000014 PAS domain VFU_RS12425 61a7522158fe075ea46cfafe06f4d0bd 432 SUPERFAMILY SSF58104 244 430 2.88E-50 T 21-04-2016 VFU_RS12425 61a7522158fe075ea46cfafe06f4d0bd 432 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 280 431 1.8E-36 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VFU_RS12425 61a7522158fe075ea46cfafe06f4d0bd 432 Gene3D G3DSA:3.30.450.20 32 134 4.1E-17 T 21-04-2016 VFU_RS12425 61a7522158fe075ea46cfafe06f4d0bd 432 Gene3D G3DSA:3.30.450.20 154 250 8.7E-19 T 21-04-2016 VFU_RS12425 61a7522158fe075ea46cfafe06f4d0bd 432 Gene3D G3DSA:1.10.287.950 251 429 2.6E-42 T 21-04-2016 VFU_RS12425 61a7522158fe075ea46cfafe06f4d0bd 432 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 30 136 6.7E-12 T 21-04-2016 IPR000014 PAS domain VFU_RS12425 61a7522158fe075ea46cfafe06f4d0bd 432 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 145 258 6.0E-12 T 21-04-2016 IPR000014 PAS domain VFU_RS12425 61a7522158fe075ea46cfafe06f4d0bd 432 PANTHER PTHR24422:SF12 4 430 1.3E-127 T 21-04-2016 VFU_RS12425 61a7522158fe075ea46cfafe06f4d0bd 432 SMART SM00086 213 255 6.5E-5 T 21-04-2016 IPR001610 PAC motif VFU_RS12425 61a7522158fe075ea46cfafe06f4d0bd 432 SMART SM00086 92 135 75.0 T 21-04-2016 IPR001610 PAC motif VFU_RS12425 61a7522158fe075ea46cfafe06f4d0bd 432 Pfam PF08447 PAS fold 45 128 2.5E-9 T 21-04-2016 IPR013655 PAS fold-3 GO:0005515 VFU_RS12425 61a7522158fe075ea46cfafe06f4d0bd 432 Pfam PF08447 PAS fold 165 247 4.5E-10 T 21-04-2016 IPR013655 PAS fold-3 GO:0005515 VFU_RS12425 61a7522158fe075ea46cfafe06f4d0bd 432 SUPERFAMILY SSF55785 32 131 8.72E-19 T 21-04-2016 IPR000014 PAS domain VFU_RS12425 61a7522158fe075ea46cfafe06f4d0bd 432 SMART SM00283 230 431 2.4E-21 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VFU_RS12425 61a7522158fe075ea46cfafe06f4d0bd 432 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 324 351 1.2E-21 T 21-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VFU_RS12425 61a7522158fe075ea46cfafe06f4d0bd 432 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 353 382 1.2E-21 T 21-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VFU_RS12425 61a7522158fe075ea46cfafe06f4d0bd 432 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 251 280 1.2E-21 T 21-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VFU_RS12425 61a7522158fe075ea46cfafe06f4d0bd 432 PANTHER PTHR24422 4 430 1.3E-127 T 21-04-2016 VFU_RS01535 9c8dbaef5cc2ba0a3fabaf0d06dfa140 613 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 21-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VFU_RS01535 9c8dbaef5cc2ba0a3fabaf0d06dfa140 613 SUPERFAMILY SSF143975 3 420 3.66E-136 T 21-04-2016 VFU_RS01535 9c8dbaef5cc2ba0a3fabaf0d06dfa140 613 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 607 45.242 T 21-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VFU_RS01535 9c8dbaef5cc2ba0a3fabaf0d06dfa140 613 PANTHER PTHR21000 1 371 0.0 T 21-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VFU_RS01535 9c8dbaef5cc2ba0a3fabaf0d06dfa140 613 PANTHER PTHR21000 406 613 0.0 T 21-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VFU_RS01535 9c8dbaef5cc2ba0a3fabaf0d06dfa140 613 PANTHER PTHR21000:SF11 1 371 0.0 T 21-04-2016 VFU_RS01535 9c8dbaef5cc2ba0a3fabaf0d06dfa140 613 PANTHER PTHR21000:SF11 406 613 0.0 T 21-04-2016 VFU_RS01535 9c8dbaef5cc2ba0a3fabaf0d06dfa140 613 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 21-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VFU_RS01535 9c8dbaef5cc2ba0a3fabaf0d06dfa140 613 SUPERFAMILY SSF52016 421 608 1.33E-60 T 21-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VFU_RS01535 9c8dbaef5cc2ba0a3fabaf0d06dfa140 613 Pfam PF00920 Dehydratase family 34 604 8.6E-219 T 21-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VFU_RS01535 9c8dbaef5cc2ba0a3fabaf0d06dfa140 613 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 607 6.5E-267 T 21-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VFU_RS04615 2cfcf6438cab8caff306ad3fa31f51ff 495 Pfam PF08529 NusA N-terminal domain 4 123 3.6E-36 T 21-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 VFU_RS04615 2cfcf6438cab8caff306ad3fa31f51ff 495 SUPERFAMILY SSF54814 279 342 3.84E-15 T 21-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 VFU_RS04615 2cfcf6438cab8caff306ad3fa31f51ff 495 SUPERFAMILY SSF50249 132 199 1.63E-16 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS04615 2cfcf6438cab8caff306ad3fa31f51ff 495 Gene3D G3DSA:3.30.300.20 278 347 2.7E-27 T 21-04-2016 IPR015946 K homology domain-like, alpha/beta VFU_RS04615 2cfcf6438cab8caff306ad3fa31f51ff 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 3.8E-21 T 21-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication VFU_RS04615 2cfcf6438cab8caff306ad3fa31f51ff 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 440 489 2.1E-18 T 21-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication VFU_RS04615 2cfcf6438cab8caff306ad3fa31f51ff 495 SUPERFAMILY SSF47794 429 492 1.88E-16 T 21-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 VFU_RS04615 2cfcf6438cab8caff306ad3fa31f51ff 495 Gene3D G3DSA:2.40.50.140 128 197 1.5E-22 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS04615 2cfcf6438cab8caff306ad3fa31f51ff 495 Gene3D G3DSA:3.30.1480.10 1 124 1.5E-44 T 21-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 VFU_RS04615 2cfcf6438cab8caff306ad3fa31f51ff 495 SUPERFAMILY SSF54814 201 278 4.19E-28 T 21-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 VFU_RS04615 2cfcf6438cab8caff306ad3fa31f51ff 495 PANTHER PTHR22648:SF0 1 448 1.0E-185 T 21-04-2016 VFU_RS04615 2cfcf6438cab8caff306ad3fa31f51ff 495 Pfam PF13184 NusA-like KH domain 230 297 9.7E-27 T 21-04-2016 IPR025249 KH domain, NusA-like GO:0003723 VFU_RS04615 2cfcf6438cab8caff306ad3fa31f51ff 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 5.3E-124 T 21-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 VFU_RS04615 2cfcf6438cab8caff306ad3fa31f51ff 495 SUPERFAMILY SSF47794 349 414 2.67E-16 T 21-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 VFU_RS04615 2cfcf6438cab8caff306ad3fa31f51ff 495 Gene3D G3DSA:3.30.300.20 199 277 8.2E-33 T 21-04-2016 IPR015946 K homology domain-like, alpha/beta VFU_RS04615 2cfcf6438cab8caff306ad3fa31f51ff 495 Pfam PF14520 Helix-hairpin-helix domain 432 486 4.6E-8 T 21-04-2016 VFU_RS04615 2cfcf6438cab8caff306ad3fa31f51ff 495 Gene3D G3DSA:1.10.150.20 357 420 4.6E-21 T 21-04-2016 VFU_RS04615 2cfcf6438cab8caff306ad3fa31f51ff 495 Gene3D G3DSA:1.10.150.20 429 493 1.8E-23 T 21-04-2016 VFU_RS04615 2cfcf6438cab8caff306ad3fa31f51ff 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 424 28.74 T 21-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 VFU_RS04615 2cfcf6438cab8caff306ad3fa31f51ff 495 PANTHER PTHR22648 1 448 1.0E-185 T 21-04-2016 VFU_RS04615 2cfcf6438cab8caff306ad3fa31f51ff 495 SUPERFAMILY SSF69705 1 126 2.09E-40 T 21-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 VFU_RS04615 2cfcf6438cab8caff306ad3fa31f51ff 495 SMART SM00316 133 198 3.9E-6 T 21-04-2016 IPR022967 RNA-binding domain, S1 VFU_RS06950 13abc77b93851530361f29085352f4b7 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 2.2E-23 T 21-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VFU_RS06950 13abc77b93851530361f29085352f4b7 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 2.2E-23 T 21-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VFU_RS06950 13abc77b93851530361f29085352f4b7 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 179 201 2.2E-23 T 21-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VFU_RS06950 13abc77b93851530361f29085352f4b7 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 201 220 2.2E-23 T 21-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VFU_RS06950 13abc77b93851530361f29085352f4b7 258 PANTHER PTHR30065:SF1 1 257 2.0E-68 T 21-04-2016 VFU_RS06950 13abc77b93851530361f29085352f4b7 258 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 15 254 1.4E-57 T 21-04-2016 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 VFU_RS06950 13abc77b93851530361f29085352f4b7 258 Pfam PF01311 Bacterial export proteins, family 1 14 242 2.0E-60 T 21-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VFU_RS06950 13abc77b93851530361f29085352f4b7 258 PANTHER PTHR30065 1 257 2.0E-68 T 21-04-2016 VFU_RS08360 cbb3db610618e1e8f9fda3f4170a1ebd 448 PANTHER PTHR24423:SF496 181 436 1.2E-47 T 21-04-2016 VFU_RS08360 cbb3db610618e1e8f9fda3f4170a1ebd 448 Gene3D G3DSA:3.30.565.10 308 443 1.2E-23 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS08360 cbb3db610618e1e8f9fda3f4170a1ebd 448 SUPERFAMILY SSF55874 308 443 6.02E-22 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS08360 cbb3db610618e1e8f9fda3f4170a1ebd 448 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 343 444 3.7E-8 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS08360 cbb3db610618e1e8f9fda3f4170a1ebd 448 SMART SM00387 340 447 1.2E-12 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS08360 cbb3db610618e1e8f9fda3f4170a1ebd 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 390 1.2E-6 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS08360 cbb3db610618e1e8f9fda3f4170a1ebd 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 425 1.2E-6 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS08360 cbb3db610618e1e8f9fda3f4170a1ebd 448 PANTHER PTHR24423 181 436 1.2E-47 T 21-04-2016 VFU_RS10985 b23a48f4f538dce8306ac58472a6c592 271 Gene3D G3DSA:3.30.1330.60 165 269 2.5E-24 T 21-04-2016 IPR006665 OmpA-like domain VFU_RS10985 b23a48f4f538dce8306ac58472a6c592 271 PANTHER PTHR30128:SF11 153 271 1.2E-20 T 21-04-2016 VFU_RS10985 b23a48f4f538dce8306ac58472a6c592 271 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 251 271 2.0E-5 T 21-04-2016 VFU_RS10985 b23a48f4f538dce8306ac58472a6c592 271 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 213 230 2.0E-5 T 21-04-2016 VFU_RS10985 b23a48f4f538dce8306ac58472a6c592 271 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 231 250 2.0E-5 T 21-04-2016 VFU_RS10985 b23a48f4f538dce8306ac58472a6c592 271 Pfam PF00691 OmpA family 167 262 2.2E-13 T 21-04-2016 IPR006665 OmpA-like domain VFU_RS10985 b23a48f4f538dce8306ac58472a6c592 271 SUPERFAMILY SSF103088 141 267 1.83E-24 T 21-04-2016 IPR006665 OmpA-like domain VFU_RS10985 b23a48f4f538dce8306ac58472a6c592 271 PANTHER PTHR30128 153 271 1.2E-20 T 21-04-2016 VFU_RS00470 f1e837b4cd6f797cd901890ba9650e49 530 Gene3D G3DSA:3.40.140.20 378 520 1.0E-60 T 21-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 VFU_RS00470 f1e837b4cd6f797cd901890ba9650e49 530 Gene3D G3DSA:3.40.50.1380 5 190 1.1E-86 T 21-04-2016 IPR011607 Methylglyoxal synthase-like domain VFU_RS00470 f1e837b4cd6f797cd901890ba9650e49 530 Pfam PF02142 MGS-like domain 19 132 1.2E-29 T 21-04-2016 IPR011607 Methylglyoxal synthase-like domain VFU_RS00470 f1e837b4cd6f797cd901890ba9650e49 530 SMART SM00798 137 462 3.1E-217 T 21-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 VFU_RS00470 f1e837b4cd6f797cd901890ba9650e49 530 PANTHER PTHR11692:SF2 5 530 0.0 T 21-04-2016 VFU_RS00470 f1e837b4cd6f797cd901890ba9650e49 530 Gene3D G3DSA:3.40.140.20 254 373 8.7E-50 T 21-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 VFU_RS00470 f1e837b4cd6f797cd901890ba9650e49 530 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 530 45.685 T 21-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 VFU_RS00470 f1e837b4cd6f797cd901890ba9650e49 530 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 530 2.1E-259 T 21-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 VFU_RS00470 f1e837b4cd6f797cd901890ba9650e49 530 PANTHER PTHR11692 5 530 0.0 T 21-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 VFU_RS00470 f1e837b4cd6f797cd901890ba9650e49 530 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 461 9.3E-119 T 21-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 VFU_RS00470 f1e837b4cd6f797cd901890ba9650e49 530 SUPERFAMILY SSF52335 7 197 6.54E-72 T 21-04-2016 IPR011607 Methylglyoxal synthase-like domain VFU_RS00470 f1e837b4cd6f797cd901890ba9650e49 530 SMART SM00851 19 132 7.0E-61 T 21-04-2016 IPR011607 Methylglyoxal synthase-like domain VFU_RS00470 f1e837b4cd6f797cd901890ba9650e49 530 PIRSF PIRSF000414 1 530 9.1E-228 T 21-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 VFU_RS00470 f1e837b4cd6f797cd901890ba9650e49 530 SUPERFAMILY SSF53927 222 530 5.01E-130 T 21-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 VFU_RS05270 2403a2ef4b704ea2ff93f6a8829549a9 250 Pfam PF01255 Putative undecaprenyl diphosphate synthase 18 238 1.5E-81 T 21-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 VFU_RS05270 2403a2ef4b704ea2ff93f6a8829549a9 250 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 11 239 39.5 T 21-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 VFU_RS05270 2403a2ef4b704ea2ff93f6a8829549a9 250 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 184 201 - T 21-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 VFU_RS05270 2403a2ef4b704ea2ff93f6a8829549a9 250 SUPERFAMILY SSF64005 10 234 1.18E-88 T 21-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 VFU_RS05270 2403a2ef4b704ea2ff93f6a8829549a9 250 PANTHER PTHR10291 1 250 1.9E-126 T 21-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 VFU_RS05270 2403a2ef4b704ea2ff93f6a8829549a9 250 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 11 238 2.5E-95 T 21-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 VFU_RS05270 2403a2ef4b704ea2ff93f6a8829549a9 250 Gene3D G3DSA:3.40.1180.10 4 245 2.0E-100 T 21-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 VFU_RS12745 d4911993c1e9c837827e6c0fe1dd870d 309 Pfam PF16200 C-terminal region of band_7 241 303 1.3E-7 T 21-04-2016 IPR032435 Band 7, C-terminal extension VFU_RS12745 d4911993c1e9c837827e6c0fe1dd870d 309 PRINTS PR00721 Stomatin signature 77 98 6.5E-30 T 21-04-2016 IPR001972 Stomatin family GO:0016020 VFU_RS12745 d4911993c1e9c837827e6c0fe1dd870d 309 PRINTS PR00721 Stomatin signature 156 174 6.5E-30 T 21-04-2016 IPR001972 Stomatin family GO:0016020 VFU_RS12745 d4911993c1e9c837827e6c0fe1dd870d 309 PRINTS PR00721 Stomatin signature 112 129 6.5E-30 T 21-04-2016 IPR001972 Stomatin family GO:0016020 VFU_RS12745 d4911993c1e9c837827e6c0fe1dd870d 309 PRINTS PR00721 Stomatin signature 175 196 6.5E-30 T 21-04-2016 IPR001972 Stomatin family GO:0016020 VFU_RS12745 d4911993c1e9c837827e6c0fe1dd870d 309 PRINTS PR00721 Stomatin signature 132 155 6.5E-30 T 21-04-2016 IPR001972 Stomatin family GO:0016020 VFU_RS12745 d4911993c1e9c837827e6c0fe1dd870d 309 SUPERFAMILY SSF117892 53 187 5.75E-42 T 21-04-2016 IPR001107 Band 7 domain VFU_RS12745 d4911993c1e9c837827e6c0fe1dd870d 309 SMART SM00244 22 180 2.4E-59 T 21-04-2016 IPR001107 Band 7 domain VFU_RS12745 d4911993c1e9c837827e6c0fe1dd870d 309 PANTHER PTHR10264 6 301 1.4E-117 T 21-04-2016 IPR001972 Stomatin family GO:0016020 VFU_RS12745 d4911993c1e9c837827e6c0fe1dd870d 309 Pfam PF01145 SPFH domain / Band 7 family 26 207 3.1E-35 T 21-04-2016 IPR001107 Band 7 domain VFU_RS12745 d4911993c1e9c837827e6c0fe1dd870d 309 PANTHER PTHR10264:SF27 6 301 1.4E-117 T 21-04-2016 VFU_RS12745 d4911993c1e9c837827e6c0fe1dd870d 309 ProSitePatterns PS01270 Band 7 protein family signature. 136 164 - T 21-04-2016 IPR018080 Band 7/stomatin-like, conserved site VFU_RS13740 3905724f32c83d6c7d1a33bff0cb8f53 371 PANTHER PTHR30124:SF0 13 369 1.8E-125 T 21-04-2016 VFU_RS13740 3905724f32c83d6c7d1a33bff0cb8f53 371 PANTHER PTHR30124 13 369 1.8E-125 T 21-04-2016 VFU_RS13740 3905724f32c83d6c7d1a33bff0cb8f53 371 SMART SM00925 123 256 1.8E-66 T 21-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 VFU_RS13740 3905724f32c83d6c7d1a33bff0cb8f53 371 Pfam PF06725 3D domain 276 352 8.4E-21 T 21-04-2016 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 VFU_RS13740 3905724f32c83d6c7d1a33bff0cb8f53 371 SUPERFAMILY SSF50685 24 354 5.23E-103 T 21-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain VFU_RS13740 3905724f32c83d6c7d1a33bff0cb8f53 371 Pfam PF03562 MltA specific insert domain 148 256 4.3E-31 T 21-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 VFU_RS13740 3905724f32c83d6c7d1a33bff0cb8f53 371 Gene3D G3DSA:2.40.40.10 165 355 5.5E-43 T 21-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain VFU_RS13740 3905724f32c83d6c7d1a33bff0cb8f53 371 Gene3D G3DSA:2.40.40.10 77 163 6.1E-10 T 21-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain VFU_RS15375 e4e0c76e7fed750406477c706457ac7d 158 SUPERFAMILY SSF47240 1 153 2.24E-56 T 21-04-2016 IPR009078 Ferritin-like superfamily VFU_RS15375 e4e0c76e7fed750406477c706457ac7d 158 Pfam PF00210 Ferritin-like domain 8 143 7.0E-41 T 21-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 VFU_RS15375 e4e0c76e7fed750406477c706457ac7d 158 PANTHER PTHR30295 1 153 1.7E-53 T 21-04-2016 VFU_RS15375 e4e0c76e7fed750406477c706457ac7d 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 21-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VFU_RS15375 e4e0c76e7fed750406477c706457ac7d 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 157 4.2E-83 T 21-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VFU_RS15375 e4e0c76e7fed750406477c706457ac7d 158 Gene3D G3DSA:1.20.1260.10 1 155 1.1E-66 T 21-04-2016 IPR012347 Ferritin-related VFU_RS15375 e4e0c76e7fed750406477c706457ac7d 158 PANTHER PTHR30295:SF9 1 153 1.7E-53 T 21-04-2016 VFU_RS15375 e4e0c76e7fed750406477c706457ac7d 158 PIRSF PIRSF002560 1 157 9.6E-73 T 21-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VFU_RS15375 e4e0c76e7fed750406477c706457ac7d 158 PRINTS PR00601 Bacterioferritin signature 3 22 1.2E-72 T 21-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VFU_RS15375 e4e0c76e7fed750406477c706457ac7d 158 PRINTS PR00601 Bacterioferritin signature 65 85 1.2E-72 T 21-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VFU_RS15375 e4e0c76e7fed750406477c706457ac7d 158 PRINTS PR00601 Bacterioferritin signature 23 43 1.2E-72 T 21-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VFU_RS15375 e4e0c76e7fed750406477c706457ac7d 158 PRINTS PR00601 Bacterioferritin signature 44 64 1.2E-72 T 21-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VFU_RS15375 e4e0c76e7fed750406477c706457ac7d 158 PRINTS PR00601 Bacterioferritin signature 86 106 1.2E-72 T 21-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VFU_RS15375 e4e0c76e7fed750406477c706457ac7d 158 PRINTS PR00601 Bacterioferritin signature 128 149 1.2E-72 T 21-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VFU_RS15375 e4e0c76e7fed750406477c706457ac7d 158 PRINTS PR00601 Bacterioferritin signature 107 127 1.2E-72 T 21-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VFU_RS07505 733b63880d99c15731812ba5d6c2b1af 123 Gene3D G3DSA:3.10.129.10 12 113 1.0E-12 T 21-04-2016 IPR029069 HotDog domain VFU_RS07505 733b63880d99c15731812ba5d6c2b1af 123 SUPERFAMILY SSF54637 13 112 2.05E-13 T 21-04-2016 IPR029069 HotDog domain VFU_RS07505 733b63880d99c15731812ba5d6c2b1af 123 PIRSF PIRSF030962 1 123 1.9E-50 T 21-04-2016 IPR016962 Dehydrase, ECs4332, predicted VFU_RS06320 38815f865832235d549ff616f5a98f6f 407 SUPERFAMILY SSF48452 164 270 8.22E-13 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VFU_RS06320 38815f865832235d549ff616f5a98f6f 407 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 3 116 1.4E-31 T 21-04-2016 IPR017560 Cytochrome c-type biogenesis protein CcmI VFU_RS06320 38815f865832235d549ff616f5a98f6f 407 Gene3D G3DSA:1.25.40.10 164 207 6.7E-4 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VFU_RS06320 38815f865832235d549ff616f5a98f6f 407 PANTHER PTHR30009 94 315 1.6E-19 T 21-04-2016 VFU_RS06320 38815f865832235d549ff616f5a98f6f 407 Gene3D G3DSA:1.25.40.10 208 290 3.1E-19 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VFU_RS06320 38815f865832235d549ff616f5a98f6f 407 Pfam PF14559 Tetratricopeptide repeat 179 247 2.3E-8 T 21-04-2016 VFU_RS06320 38815f865832235d549ff616f5a98f6f 407 PANTHER PTHR30009:SF10 94 315 1.6E-19 T 21-04-2016 VFU_RS11940 520d170ffddd42a7bf5ceddaba6aec68 352 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS11940 520d170ffddd42a7bf5ceddaba6aec68 352 PANTHER PTHR24220:SF536 8 331 1.1E-221 T 21-04-2016 VFU_RS11940 520d170ffddd42a7bf5ceddaba6aec68 352 PANTHER PTHR24220 8 331 1.1E-221 T 21-04-2016 VFU_RS11940 520d170ffddd42a7bf5ceddaba6aec68 352 SUPERFAMILY SSF50331 239 348 2.27E-13 T 21-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal VFU_RS11940 520d170ffddd42a7bf5ceddaba6aec68 352 Pfam PF00005 ABC transporter 24 164 1.8E-34 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS11940 520d170ffddd42a7bf5ceddaba6aec68 352 SUPERFAMILY SSF52540 7 244 5.06E-85 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS11940 520d170ffddd42a7bf5ceddaba6aec68 352 Gene3D G3DSA:3.40.50.300 3 239 2.7E-80 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS11940 520d170ffddd42a7bf5ceddaba6aec68 352 Pfam PF08402 TOBE domain 276 326 4.4E-6 T 21-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 VFU_RS11940 520d170ffddd42a7bf5ceddaba6aec68 352 SMART SM00382 31 214 4.9E-18 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS00085 2406078e4b0f8515a8227e7d06366cf8 649 PANTHER PTHR10073 3 378 1.7E-154 T 21-04-2016 VFU_RS00085 2406078e4b0f8515a8227e7d06366cf8 649 SMART SM01340 212 330 1.9E-58 T 21-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 VFU_RS00085 2406078e4b0f8515a8227e7d06366cf8 649 SUPERFAMILY SSF118116 463 647 3.66E-39 T 21-04-2016 VFU_RS00085 2406078e4b0f8515a8227e7d06366cf8 649 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 120 1.8E-11 T 21-04-2016 VFU_RS00085 2406078e4b0f8515a8227e7d06366cf8 649 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 212 329 5.8E-40 T 21-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 VFU_RS00085 2406078e4b0f8515a8227e7d06366cf8 649 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 647 25.668 T 21-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 VFU_RS00085 2406078e4b0f8515a8227e7d06366cf8 649 Pfam PF08676 MutL C terminal dimerisation domain 464 599 2.1E-28 T 21-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 VFU_RS00085 2406078e4b0f8515a8227e7d06366cf8 649 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 21-04-2016 IPR014762 DNA mismatch repair, conserved site VFU_RS00085 2406078e4b0f8515a8227e7d06366cf8 649 Gene3D G3DSA:3.30.565.10 1 217 1.3E-78 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS00085 2406078e4b0f8515a8227e7d06366cf8 649 SMART SM00853 467 608 1.1E-16 T 21-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 VFU_RS00085 2406078e4b0f8515a8227e7d06366cf8 649 SUPERFAMILY SSF54211 191 330 1.67E-38 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VFU_RS00085 2406078e4b0f8515a8227e7d06366cf8 649 SUPERFAMILY SSF55874 1 204 2.23E-55 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS00085 2406078e4b0f8515a8227e7d06366cf8 649 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 310 2.8E-103 T 21-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 VFU_RS00085 2406078e4b0f8515a8227e7d06366cf8 649 Gene3D G3DSA:3.30.230.10 218 329 1.8E-39 T 21-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VFU_RS10515 9af66a08886160f870b83cf111bc30bd 400 Pfam PF01979 Amidohydrolase family 57 373 5.6E-14 T 21-04-2016 IPR006680 Amidohydrolase-related GO:0016787 VFU_RS10515 9af66a08886160f870b83cf111bc30bd 400 Gene3D G3DSA:2.30.40.10 1 70 1.3E-16 T 21-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VFU_RS10515 9af66a08886160f870b83cf111bc30bd 400 PANTHER PTHR22642 47 385 3.6E-142 T 21-04-2016 VFU_RS10515 9af66a08886160f870b83cf111bc30bd 400 Hamap MF_00372 Imidazolonepropionase [hutI]. 2 398 40.932 T 21-04-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VFU_RS10515 9af66a08886160f870b83cf111bc30bd 400 PANTHER PTHR22642:SF1 47 385 3.6E-142 T 21-04-2016 VFU_RS10515 9af66a08886160f870b83cf111bc30bd 400 Gene3D G3DSA:2.30.40.10 344 379 4.0E-6 T 21-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VFU_RS10515 9af66a08886160f870b83cf111bc30bd 400 SUPERFAMILY SSF51556 59 358 3.52E-82 T 21-04-2016 IPR032466 Metal-dependent hydrolase VFU_RS10515 9af66a08886160f870b83cf111bc30bd 400 TIGRFAM TIGR01224 hutI: imidazolonepropionase 24 396 1.1E-154 T 21-04-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VFU_RS10515 9af66a08886160f870b83cf111bc30bd 400 Gene3D G3DSA:3.20.20.140 71 343 3.5E-40 T 21-04-2016 VFU_RS10515 9af66a08886160f870b83cf111bc30bd 400 SUPERFAMILY SSF51338 1 59 6.11E-25 T 21-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VFU_RS10515 9af66a08886160f870b83cf111bc30bd 400 SUPERFAMILY SSF51338 360 399 6.11E-25 T 21-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VFU_RS14410 eaa239c28ae32187caa67540912b58ee 951 Pfam PF05193 Peptidase M16 inactive domain 219 392 3.1E-29 T 21-04-2016 IPR007863 Peptidase M16, C-terminal VFU_RS14410 eaa239c28ae32187caa67540912b58ee 951 Pfam PF05193 Peptidase M16 inactive domain 686 857 6.5E-24 T 21-04-2016 IPR007863 Peptidase M16, C-terminal VFU_RS14410 eaa239c28ae32187caa67540912b58ee 951 SUPERFAMILY SSF63411 519 722 4.67E-42 T 21-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VFU_RS14410 eaa239c28ae32187caa67540912b58ee 951 SUPERFAMILY SSF63411 49 258 1.1E-55 T 21-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VFU_RS14410 eaa239c28ae32187caa67540912b58ee 951 PANTHER PTHR11851:SF136 12 856 4.1E-283 T 21-04-2016 VFU_RS14410 eaa239c28ae32187caa67540912b58ee 951 Gene3D G3DSA:3.30.830.10 283 462 2.3E-21 T 21-04-2016 IPR011237 Peptidase M16 domain GO:0046872 VFU_RS14410 eaa239c28ae32187caa67540912b58ee 951 SUPERFAMILY SSF63411 737 940 1.83E-37 T 21-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VFU_RS14410 eaa239c28ae32187caa67540912b58ee 951 SUPERFAMILY SSF63411 281 467 1.23E-29 T 21-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VFU_RS14410 eaa239c28ae32187caa67540912b58ee 951 Gene3D G3DSA:3.30.830.10 522 732 1.4E-46 T 21-04-2016 IPR011237 Peptidase M16 domain GO:0046872 VFU_RS14410 eaa239c28ae32187caa67540912b58ee 951 Gene3D G3DSA:3.30.830.10 50 267 3.2E-57 T 21-04-2016 IPR011237 Peptidase M16 domain GO:0046872 VFU_RS14410 eaa239c28ae32187caa67540912b58ee 951 Pfam PF00675 Insulinase (Peptidase family M16) 62 179 4.5E-18 T 21-04-2016 IPR011765 Peptidase M16, N-terminal VFU_RS14410 eaa239c28ae32187caa67540912b58ee 951 Pfam PF00675 Insulinase (Peptidase family M16) 538 643 3.5E-9 T 21-04-2016 IPR011765 Peptidase M16, N-terminal VFU_RS14410 eaa239c28ae32187caa67540912b58ee 951 Gene3D G3DSA:3.30.830.10 745 929 3.0E-22 T 21-04-2016 IPR011237 Peptidase M16 domain GO:0046872 VFU_RS14410 eaa239c28ae32187caa67540912b58ee 951 PANTHER PTHR11851 12 856 4.1E-283 T 21-04-2016 VFU_RS13840 6fa651e6ea39e214779210ae694c2465 356 PANTHER PTHR33567 1 356 1.5E-104 T 21-04-2016 VFU_RS13840 6fa651e6ea39e214779210ae694c2465 356 TIGRFAM TIGR00937 2A51: chromate efflux transporter 1 350 1.1E-74 T 21-04-2016 IPR014047 Chromate transporter, long chain VFU_RS13840 6fa651e6ea39e214779210ae694c2465 356 Pfam PF02417 Chromate transporter 187 350 1.8E-32 T 21-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 VFU_RS13840 6fa651e6ea39e214779210ae694c2465 356 Pfam PF02417 Chromate transporter 1 138 8.5E-24 T 21-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 VFU_RS13840 6fa651e6ea39e214779210ae694c2465 356 PIRSF PIRSF004810 1 356 5.9E-97 T 21-04-2016 IPR014047 Chromate transporter, long chain VFU_RS13840 6fa651e6ea39e214779210ae694c2465 356 PANTHER PTHR33567:SF3 1 356 1.5E-104 T 21-04-2016 VFU_RS10200 263176e9ea831f73bf628d9d4e6bc62b 281 PANTHER PTHR32243:SF34 2 281 4.7E-167 T 21-04-2016 VFU_RS10200 263176e9ea831f73bf628d9d4e6bc62b 281 Gene3D G3DSA:1.10.3720.10 5 268 2.2E-64 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS10200 263176e9ea831f73bf628d9d4e6bc62b 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 274 4.5E-20 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS10200 263176e9ea831f73bf628d9d4e6bc62b 281 PANTHER PTHR32243 2 281 4.7E-167 T 21-04-2016 VFU_RS10200 263176e9ea831f73bf628d9d4e6bc62b 281 SUPERFAMILY SSF161098 6 281 1.4E-68 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS00095 23fad54ea9bbb6661ebd6e50c2b88c2f 154 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 134 4.3E-42 T 21-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 VFU_RS00095 23fad54ea9bbb6661ebd6e50c2b88c2f 154 PANTHER PTHR33540:SF2 1 152 6.5E-54 T 21-04-2016 VFU_RS00095 23fad54ea9bbb6661ebd6e50c2b88c2f 154 Gene3D G3DSA:3.40.50.300 4 151 2.7E-51 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS00095 23fad54ea9bbb6661ebd6e50c2b88c2f 154 PANTHER PTHR33540 1 152 6.5E-54 T 21-04-2016 VFU_RS00095 23fad54ea9bbb6661ebd6e50c2b88c2f 154 SUPERFAMILY SSF52540 28 151 2.33E-23 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS00095 23fad54ea9bbb6661ebd6e50c2b88c2f 154 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 139 3.5E-51 T 21-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 VFU_RS01340 9c4b6a34187d51b1f6161fb4a14fc015 1040 SUPERFAMILY SSF82714 701 783 5.36E-18 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VFU_RS01340 9c4b6a34187d51b1f6161fb4a14fc015 1040 Gene3D G3DSA:3.30.2090.10 700 787 3.3E-19 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VFU_RS01340 9c4b6a34187d51b1f6161fb4a14fc015 1040 Gene3D G3DSA:1.20.1640.10 284 500 1.0E-55 T 21-04-2016 VFU_RS01340 9c4b6a34187d51b1f6161fb4a14fc015 1040 PANTHER PTHR32063 1 1029 0.0 T 21-04-2016 VFU_RS01340 9c4b6a34187d51b1f6161fb4a14fc015 1040 SUPERFAMILY SSF82714 182 263 1.03E-16 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VFU_RS01340 9c4b6a34187d51b1f6161fb4a14fc015 1040 SUPERFAMILY SSF82866 290 489 4.97E-47 T 21-04-2016 VFU_RS01340 9c4b6a34187d51b1f6161fb4a14fc015 1040 SUPERFAMILY SSF82693 136 181 1.66E-19 T 21-04-2016 VFU_RS01340 9c4b6a34187d51b1f6161fb4a14fc015 1040 SUPERFAMILY SSF82693 267 323 1.66E-19 T 21-04-2016 VFU_RS01340 9c4b6a34187d51b1f6161fb4a14fc015 1040 Gene3D G3DSA:3.30.2090.10 181 263 6.8E-18 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VFU_RS01340 9c4b6a34187d51b1f6161fb4a14fc015 1040 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 1.2E-73 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS01340 9c4b6a34187d51b1f6161fb4a14fc015 1040 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.2E-73 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS01340 9c4b6a34187d51b1f6161fb4a14fc015 1040 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 1.2E-73 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS01340 9c4b6a34187d51b1f6161fb4a14fc015 1040 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 1.2E-73 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS01340 9c4b6a34187d51b1f6161fb4a14fc015 1040 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 1.2E-73 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS01340 9c4b6a34187d51b1f6161fb4a14fc015 1040 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.2E-73 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS01340 9c4b6a34187d51b1f6161fb4a14fc015 1040 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 1.2E-73 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS01340 9c4b6a34187d51b1f6161fb4a14fc015 1040 PRINTS PR00702 Acriflavin resistance protein family signature 603 617 1.2E-73 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS01340 9c4b6a34187d51b1f6161fb4a14fc015 1040 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 1.2E-73 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS01340 9c4b6a34187d51b1f6161fb4a14fc015 1040 Gene3D G3DSA:1.10.3850.10 792 1006 4.8E-56 T 21-04-2016 VFU_RS01340 9c4b6a34187d51b1f6161fb4a14fc015 1040 SUPERFAMILY SSF82866 782 1008 1.31E-45 T 21-04-2016 VFU_RS01340 9c4b6a34187d51b1f6161fb4a14fc015 1040 Gene3D G3DSA:3.30.70.1430 41 141 1.9E-28 T 21-04-2016 VFU_RS01340 9c4b6a34187d51b1f6161fb4a14fc015 1040 SUPERFAMILY SSF82693 41 130 2.17E-23 T 21-04-2016 VFU_RS01340 9c4b6a34187d51b1f6161fb4a14fc015 1040 SUPERFAMILY SSF82693 553 650 8.63E-19 T 21-04-2016 VFU_RS01340 9c4b6a34187d51b1f6161fb4a14fc015 1040 PANTHER PTHR32063:SF28 1 1029 0.0 T 21-04-2016 VFU_RS01340 9c4b6a34187d51b1f6161fb4a14fc015 1040 Gene3D G3DSA:3.30.70.1430 555 650 7.9E-13 T 21-04-2016 VFU_RS01340 9c4b6a34187d51b1f6161fb4a14fc015 1040 Pfam PF00873 AcrB/AcrD/AcrF family 4 1003 3.9E-272 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS06195 a8e38c047942cadfe8821f00c0447397 142 SUPERFAMILY SSF54197 3 133 5.95E-33 T 21-04-2016 IPR011146 HIT-like domain GO:0003824 VFU_RS06195 a8e38c047942cadfe8821f00c0447397 142 PANTHER PTHR23089 34 130 1.8E-16 T 21-04-2016 IPR001310 Histidine triad (HIT) protein VFU_RS06195 a8e38c047942cadfe8821f00c0447397 142 Pfam PF01230 HIT domain 11 100 1.1E-18 T 21-04-2016 IPR001310 Histidine triad (HIT) protein VFU_RS06195 a8e38c047942cadfe8821f00c0447397 142 Gene3D G3DSA:3.30.428.10 2 134 8.2E-36 T 21-04-2016 IPR011146 HIT-like domain GO:0003824 VFU_RS06195 a8e38c047942cadfe8821f00c0447397 142 PIRSF PIRSF000714 2 138 3.0E-52 T 21-04-2016 IPR026026 Histidine triad hydrolase, Hint-type VFU_RS06195 a8e38c047942cadfe8821f00c0447397 142 PANTHER PTHR23089:SF13 34 130 1.8E-16 T 21-04-2016 VFU_RS09950 fa89494b1033dfa17f1171b69db8e12d 419 SUPERFAMILY SSF52821 166 277 7.99E-23 T 21-04-2016 IPR001763 Rhodanese-like domain VFU_RS09950 fa89494b1033dfa17f1171b69db8e12d 419 Pfam PF00581 Rhodanese-like domain 36 132 8.9E-9 T 21-04-2016 IPR001763 Rhodanese-like domain VFU_RS09950 fa89494b1033dfa17f1171b69db8e12d 419 Pfam PF00581 Rhodanese-like domain 170 261 1.7E-13 T 21-04-2016 IPR001763 Rhodanese-like domain VFU_RS09950 fa89494b1033dfa17f1171b69db8e12d 419 Pfam PF00581 Rhodanese-like domain 304 417 1.2E-9 T 21-04-2016 IPR001763 Rhodanese-like domain VFU_RS09950 fa89494b1033dfa17f1171b69db8e12d 419 Gene3D G3DSA:3.40.250.10 287 417 2.5E-26 T 21-04-2016 IPR001763 Rhodanese-like domain VFU_RS09950 fa89494b1033dfa17f1171b69db8e12d 419 SMART SM00450 25 137 0.0065 T 21-04-2016 IPR001763 Rhodanese-like domain VFU_RS09950 fa89494b1033dfa17f1171b69db8e12d 419 SMART SM00450 153 266 6.4E-12 T 21-04-2016 IPR001763 Rhodanese-like domain VFU_RS09950 fa89494b1033dfa17f1171b69db8e12d 419 SMART SM00450 294 419 3.5E-7 T 21-04-2016 IPR001763 Rhodanese-like domain VFU_RS09950 fa89494b1033dfa17f1171b69db8e12d 419 Gene3D G3DSA:3.40.250.10 139 277 5.0E-30 T 21-04-2016 IPR001763 Rhodanese-like domain VFU_RS09950 fa89494b1033dfa17f1171b69db8e12d 419 SUPERFAMILY SSF52821 25 125 1.11E-13 T 21-04-2016 IPR001763 Rhodanese-like domain VFU_RS09950 fa89494b1033dfa17f1171b69db8e12d 419 SUPERFAMILY SSF52821 286 417 2.88E-26 T 21-04-2016 IPR001763 Rhodanese-like domain VFU_RS09950 fa89494b1033dfa17f1171b69db8e12d 419 Gene3D G3DSA:3.40.250.10 25 132 1.2E-13 T 21-04-2016 IPR001763 Rhodanese-like domain VFU_RS09950 fa89494b1033dfa17f1171b69db8e12d 419 ProSitePatterns PS00380 Rhodanese signature 1. 180 191 - T 21-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 VFU_RS09950 fa89494b1033dfa17f1171b69db8e12d 419 PANTHER PTHR11364 126 416 1.4E-123 T 21-04-2016 VFU_RS09950 fa89494b1033dfa17f1171b69db8e12d 419 PANTHER PTHR11364:SF15 126 416 1.4E-123 T 21-04-2016 VFU_RS07070 712385d418686f47c386c6141927d21f 249 Pfam PF12833 Helix-turn-helix domain 164 241 2.9E-19 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VFU_RS07070 712385d418686f47c386c6141927d21f 249 Gene3D G3DSA:2.60.120.10 12 63 1.7E-5 T 21-04-2016 IPR014710 RmlC-like jelly roll fold VFU_RS07070 712385d418686f47c386c6141927d21f 249 Gene3D G3DSA:1.10.10.60 139 195 2.7E-12 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS07070 712385d418686f47c386c6141927d21f 249 SUPERFAMILY SSF51182 15 164 7.5E-8 T 21-04-2016 IPR011051 RmlC-like cupin domain VFU_RS07070 712385d418686f47c386c6141927d21f 249 PANTHER PTHR11019:SF53 8 248 1.8E-43 T 21-04-2016 VFU_RS07070 712385d418686f47c386c6141927d21f 249 SMART SM00342 158 240 3.5E-24 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VFU_RS07070 712385d418686f47c386c6141927d21f 249 SUPERFAMILY SSF46689 201 242 7.89E-8 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS07070 712385d418686f47c386c6141927d21f 249 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 195 236 - T 21-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VFU_RS07070 712385d418686f47c386c6141927d21f 249 SUPERFAMILY SSF46689 141 193 5.82E-9 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS07070 712385d418686f47c386c6141927d21f 249 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 209 224 3.9E-5 T 21-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VFU_RS07070 712385d418686f47c386c6141927d21f 249 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 224 240 3.9E-5 T 21-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VFU_RS07070 712385d418686f47c386c6141927d21f 249 Gene3D G3DSA:1.10.10.60 202 242 2.1E-9 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS07070 712385d418686f47c386c6141927d21f 249 PANTHER PTHR11019 8 248 1.8E-43 T 21-04-2016 VFU_RS00065 870791d51168aa9d443034a206c9fabb 397 PANTHER PTHR10264:SF51 7 384 4.5E-205 T 21-04-2016 IPR010201 HflK GO:0016021 VFU_RS00065 870791d51168aa9d443034a206c9fabb 397 TIGRFAM TIGR01933 hflK: HflK protein 89 349 1.6E-123 T 21-04-2016 IPR010201 HflK GO:0016021 VFU_RS00065 870791d51168aa9d443034a206c9fabb 397 PRINTS PR00721 Stomatin signature 94 116 8.1E-7 T 21-04-2016 IPR001972 Stomatin family GO:0016020 VFU_RS00065 870791d51168aa9d443034a206c9fabb 397 PRINTS PR00721 Stomatin signature 141 162 8.1E-7 T 21-04-2016 IPR001972 Stomatin family GO:0016020 VFU_RS00065 870791d51168aa9d443034a206c9fabb 397 PRINTS PR00721 Stomatin signature 197 220 8.1E-7 T 21-04-2016 IPR001972 Stomatin family GO:0016020 VFU_RS00065 870791d51168aa9d443034a206c9fabb 397 Pfam PF01145 SPFH domain / Band 7 family 91 262 2.9E-31 T 21-04-2016 IPR001107 Band 7 domain VFU_RS00065 870791d51168aa9d443034a206c9fabb 397 SMART SM00244 87 247 1.1E-50 T 21-04-2016 IPR001107 Band 7 domain VFU_RS00065 870791d51168aa9d443034a206c9fabb 397 Pfam PF12221 Bacterial membrane protein N terminal 1 56 8.7E-15 T 21-04-2016 IPR020980 Menbrane protein HflK, N-terminal VFU_RS00065 870791d51168aa9d443034a206c9fabb 397 PANTHER PTHR10264 7 384 4.5E-205 T 21-04-2016 IPR001972 Stomatin family GO:0016020 VFU_RS00065 870791d51168aa9d443034a206c9fabb 397 SUPERFAMILY SSF117892 120 252 1.96E-22 T 21-04-2016 IPR001107 Band 7 domain VFU_RS04400 1c5e9f428823948a7819d74d15df8702 782 Pfam PF00912 Transglycosylase 181 352 1.9E-59 T 21-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 VFU_RS04400 1c5e9f428823948a7819d74d15df8702 782 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 185 719 4.1E-154 T 21-04-2016 VFU_RS04400 1c5e9f428823948a7819d74d15df8702 782 Pfam PF14814 Bifunctional transglycosylase second domain 85 168 1.1E-25 T 21-04-2016 IPR028166 Bifunctional transglycosylase second domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VFU_RS04400 1c5e9f428823948a7819d74d15df8702 782 Gene3D G3DSA:3.40.710.10 355 749 1.9E-105 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VFU_RS04400 1c5e9f428823948a7819d74d15df8702 782 PIRSF PIRSF002799 10 782 0.0 T 21-04-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VFU_RS04400 1c5e9f428823948a7819d74d15df8702 782 PANTHER PTHR32282 168 735 2.1E-262 T 21-04-2016 VFU_RS04400 1c5e9f428823948a7819d74d15df8702 782 Gene3D G3DSA:1.20.5.100 29 67 2.2E-5 T 21-04-2016 VFU_RS04400 1c5e9f428823948a7819d74d15df8702 782 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 40 761 0.0 T 21-04-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VFU_RS04400 1c5e9f428823948a7819d74d15df8702 782 SUPERFAMILY SSF53955 181 375 2.81E-69 T 21-04-2016 IPR023346 Lysozyme-like domain VFU_RS04400 1c5e9f428823948a7819d74d15df8702 782 Pfam PF00905 Penicillin binding protein transpeptidase domain 444 683 1.5E-21 T 21-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VFU_RS04400 1c5e9f428823948a7819d74d15df8702 782 Gene3D G3DSA:1.10.3810.10 178 354 3.8E-68 T 21-04-2016 VFU_RS04400 1c5e9f428823948a7819d74d15df8702 782 Gene3D G3DSA:3.30.2060.10 83 172 5.1E-28 T 21-04-2016 VFU_RS04400 1c5e9f428823948a7819d74d15df8702 782 PANTHER PTHR32282:SF11 168 735 2.1E-262 T 21-04-2016 VFU_RS04400 1c5e9f428823948a7819d74d15df8702 782 SUPERFAMILY SSF56601 334 356 1.36E-106 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VFU_RS04400 1c5e9f428823948a7819d74d15df8702 782 SUPERFAMILY SSF56601 384 758 1.36E-106 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VFU_RS07825 cf3991bcdd4fc80c4f12d1dda21ce4e9 346 Gene3D G3DSA:3.90.1150.10 259 344 2.3E-12 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VFU_RS07825 cf3991bcdd4fc80c4f12d1dda21ce4e9 346 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 206 215 - T 21-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 VFU_RS07825 cf3991bcdd4fc80c4f12d1dda21ce4e9 346 PANTHER PTHR11751:SF398 3 338 3.1E-98 T 21-04-2016 VFU_RS07825 cf3991bcdd4fc80c4f12d1dda21ce4e9 346 Pfam PF00155 Aminotransferase class I and II 41 339 4.3E-57 T 21-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VFU_RS07825 cf3991bcdd4fc80c4f12d1dda21ce4e9 346 SUPERFAMILY SSF53383 10 344 4.4E-75 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VFU_RS07825 cf3991bcdd4fc80c4f12d1dda21ce4e9 346 Gene3D G3DSA:3.40.640.10 41 253 1.9E-73 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VFU_RS07825 cf3991bcdd4fc80c4f12d1dda21ce4e9 346 PANTHER PTHR11751 3 338 3.1E-98 T 21-04-2016 VFU_RS07825 cf3991bcdd4fc80c4f12d1dda21ce4e9 346 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 345 53.975 T 21-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 VFU_RS07825 cf3991bcdd4fc80c4f12d1dda21ce4e9 346 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 6 343 1.3E-120 T 21-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 VFU_RS10495 c4d001720e9d59c2661cdd2b30cd820d 188 SUPERFAMILY SSF50104 1 65 1.14E-10 T 21-04-2016 IPR008991 Translation protein SH3-like domain VFU_RS10495 c4d001720e9d59c2661cdd2b30cd820d 188 SMART SM01185 69 124 1.1E-14 T 21-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 VFU_RS10495 c4d001720e9d59c2661cdd2b30cd820d 188 SUPERFAMILY SSF50249 67 129 7.71E-12 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS10495 c4d001720e9d59c2661cdd2b30cd820d 188 ProSitePatterns PS01275 Elongation factor P signature. 153 172 - T 21-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 VFU_RS10495 c4d001720e9d59c2661cdd2b30cd820d 188 PANTHER PTHR30053:SF5 1 188 2.2E-108 T 21-04-2016 VFU_RS10495 c4d001720e9d59c2661cdd2b30cd820d 188 PIRSF PIRSF005901 1 188 1.4E-59 T 21-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 VFU_RS10495 c4d001720e9d59c2661cdd2b30cd820d 188 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 188 5.1E-95 T 21-04-2016 IPR011897 Translation elongation factor P-like, YeiP VFU_RS10495 c4d001720e9d59c2661cdd2b30cd820d 188 PANTHER PTHR30053 1 188 2.2E-108 T 21-04-2016 VFU_RS10495 c4d001720e9d59c2661cdd2b30cd820d 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 124 8.2E-14 T 21-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 VFU_RS10495 c4d001720e9d59c2661cdd2b30cd820d 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 4.6E-15 T 21-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 VFU_RS10495 c4d001720e9d59c2661cdd2b30cd820d 188 Gene3D G3DSA:2.40.50.140 67 129 4.8E-16 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS10495 c4d001720e9d59c2661cdd2b30cd820d 188 Pfam PF09285 Elongation factor P, C-terminal 132 187 2.6E-18 T 21-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 VFU_RS10495 c4d001720e9d59c2661cdd2b30cd820d 188 Gene3D G3DSA:2.40.50.140 131 188 2.7E-21 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS10495 c4d001720e9d59c2661cdd2b30cd820d 188 Gene3D G3DSA:2.30.30.30 1 64 3.1E-12 T 21-04-2016 IPR014722 Ribosomal protein L2 domain 2 VFU_RS10495 c4d001720e9d59c2661cdd2b30cd820d 188 SMART SM00841 132 187 5.3E-25 T 21-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 VFU_RS10495 c4d001720e9d59c2661cdd2b30cd820d 188 SUPERFAMILY SSF50249 132 188 2.57E-14 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS10495 c4d001720e9d59c2661cdd2b30cd820d 188 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 188 45.575 T 21-04-2016 IPR011897 Translation elongation factor P-like, YeiP VFU_RS07780 0cab3851ab14da2aa10dc08174fc670b 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 332 446 6.9E-52 T 21-04-2016 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 VFU_RS07780 0cab3851ab14da2aa10dc08174fc670b 456 Gene3D G3DSA:1.20.200.10 120 390 3.3E-88 T 21-04-2016 VFU_RS07780 0cab3851ab14da2aa10dc08174fc670b 456 Gene3D G3DSA:1.10.275.10 1 119 2.4E-49 T 21-04-2016 IPR024083 Fumarase/histidase, N-terminal VFU_RS07780 0cab3851ab14da2aa10dc08174fc670b 456 Pfam PF00206 Lyase 14 313 2.4E-72 T 21-04-2016 IPR022761 Fumarate lyase, N-terminal VFU_RS07780 0cab3851ab14da2aa10dc08174fc670b 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 455 3.3E-148 T 21-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 VFU_RS07780 0cab3851ab14da2aa10dc08174fc670b 456 SUPERFAMILY SSF48557 4 449 1.57E-109 T 21-04-2016 IPR008948 L-Aspartase-like GO:0003824 VFU_RS07780 0cab3851ab14da2aa10dc08174fc670b 456 ProSitePatterns PS00163 Fumarate lyases signature. 295 304 - T 21-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 VFU_RS07780 0cab3851ab14da2aa10dc08174fc670b 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 8.6E-19 T 21-04-2016 IPR000362 Fumarate lyase family VFU_RS07780 0cab3851ab14da2aa10dc08174fc670b 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 8.6E-19 T 21-04-2016 IPR000362 Fumarate lyase family VFU_RS07780 0cab3851ab14da2aa10dc08174fc670b 456 PRINTS PR00149 Fumarate lyase superfamily signature 252 279 8.6E-19 T 21-04-2016 IPR000362 Fumarate lyase family VFU_RS07780 0cab3851ab14da2aa10dc08174fc670b 456 PRINTS PR00149 Fumarate lyase superfamily signature 295 311 8.6E-19 T 21-04-2016 IPR000362 Fumarate lyase family VFU_RS07780 0cab3851ab14da2aa10dc08174fc670b 456 PANTHER PTHR11444 4 456 0.0 T 21-04-2016 IPR000362 Fumarate lyase family VFU_RS07780 0cab3851ab14da2aa10dc08174fc670b 456 PANTHER PTHR11444:SF17 4 456 0.0 T 21-04-2016 VFU_RS07780 0cab3851ab14da2aa10dc08174fc670b 456 Gene3D G3DSA:1.10.40.30 391 446 8.6E-34 T 21-04-2016 VFU_RS08430 15a8770abb102150157239ba6411ac39 425 Pfam PF02321 Outer membrane efflux protein 12 201 2.0E-25 T 21-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VFU_RS08430 15a8770abb102150157239ba6411ac39 425 Pfam PF02321 Outer membrane efflux protein 221 405 2.4E-24 T 21-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VFU_RS08430 15a8770abb102150157239ba6411ac39 425 PANTHER PTHR30026:SF4 1 425 2.7E-97 T 21-04-2016 VFU_RS08430 15a8770abb102150157239ba6411ac39 425 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 9 420 1.9E-116 T 21-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 VFU_RS08430 15a8770abb102150157239ba6411ac39 425 PANTHER PTHR30026 1 425 2.7E-97 T 21-04-2016 VFU_RS08430 15a8770abb102150157239ba6411ac39 425 Gene3D G3DSA:1.20.1600.10 6 408 1.8E-63 T 21-04-2016 VFU_RS08430 15a8770abb102150157239ba6411ac39 425 SUPERFAMILY SSF56954 11 420 5.36E-83 T 21-04-2016 VFU_RS06280 50cd86a7ebf3faa8cd2ca085ba4a62c5 206 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS06280 50cd86a7ebf3faa8cd2ca085ba4a62c5 206 PANTHER PTHR24220:SF508 3 189 1.2E-94 T 21-04-2016 VFU_RS06280 50cd86a7ebf3faa8cd2ca085ba4a62c5 206 SMART SM00382 26 205 1.7E-4 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS06280 50cd86a7ebf3faa8cd2ca085ba4a62c5 206 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 203 9.4E-78 T 21-04-2016 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 VFU_RS06280 50cd86a7ebf3faa8cd2ca085ba4a62c5 206 SUPERFAMILY SSF52540 2 194 1.3E-42 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS06280 50cd86a7ebf3faa8cd2ca085ba4a62c5 206 Gene3D G3DSA:3.40.50.300 1 192 2.4E-42 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS06280 50cd86a7ebf3faa8cd2ca085ba4a62c5 206 Pfam PF00005 ABC transporter 19 158 4.4E-29 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS06280 50cd86a7ebf3faa8cd2ca085ba4a62c5 206 PANTHER PTHR24220 3 189 1.2E-94 T 21-04-2016 VFU_RS14235 f71b3d5dfee8583f9d697a5f9dbf6937 397 PANTHER PTHR30474:SF2 3 397 6.1E-181 T 21-04-2016 VFU_RS14235 f71b3d5dfee8583f9d697a5f9dbf6937 397 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 24 380 2.8E-130 T 21-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 VFU_RS14235 f71b3d5dfee8583f9d697a5f9dbf6937 397 PANTHER PTHR30474 3 397 6.1E-181 T 21-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 VFU_RS14235 f71b3d5dfee8583f9d697a5f9dbf6937 397 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 22 390 41.25 T 21-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 VFU_RS14235 f71b3d5dfee8583f9d697a5f9dbf6937 397 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 339 363 - T 21-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 VFU_RS14235 f71b3d5dfee8583f9d697a5f9dbf6937 397 Pfam PF01098 Cell cycle protein 26 381 1.4E-115 T 21-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 VFU_RS05030 90415a16283d4cec7953de7cc765a0ec 181 PANTHER PTHR11071:SF265 23 180 3.9E-57 T 21-04-2016 VFU_RS05030 90415a16283d4cec7953de7cc765a0ec 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 61 73 5.5E-10 T 21-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 VFU_RS05030 90415a16283d4cec7953de7cc765a0ec 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 35 50 5.5E-10 T 21-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 VFU_RS05030 90415a16283d4cec7953de7cc765a0ec 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 5.5E-10 T 21-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 VFU_RS05030 90415a16283d4cec7953de7cc765a0ec 181 SUPERFAMILY SSF50891 18 180 9.2E-52 T 21-04-2016 IPR029000 Cyclophilin-like domain VFU_RS05030 90415a16283d4cec7953de7cc765a0ec 181 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 22 178 4.6E-43 T 21-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 VFU_RS05030 90415a16283d4cec7953de7cc765a0ec 181 PANTHER PTHR11071 23 180 3.9E-57 T 21-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 VFU_RS05030 90415a16283d4cec7953de7cc765a0ec 181 Gene3D G3DSA:2.40.100.10 20 180 2.5E-48 T 21-04-2016 IPR029000 Cyclophilin-like domain VFU_RS05030 90415a16283d4cec7953de7cc765a0ec 181 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 56 73 - T 21-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 VFU_RS04555 9a30b21456e46a3dd615bfd6253f2782 347 Pfam PF13609 Gram-negative porin 9 309 3.4E-26 T 21-04-2016 VFU_RS04555 9a30b21456e46a3dd615bfd6253f2782 347 PANTHER PTHR34501 2 347 4.8E-79 T 21-04-2016 VFU_RS04555 9a30b21456e46a3dd615bfd6253f2782 347 PANTHER PTHR34501:SF2 2 347 4.8E-79 T 21-04-2016 VFU_RS04555 9a30b21456e46a3dd615bfd6253f2782 347 SUPERFAMILY SSF56935 23 347 1.83E-51 T 21-04-2016 VFU_RS04555 9a30b21456e46a3dd615bfd6253f2782 347 Gene3D G3DSA:2.40.160.10 23 347 5.7E-56 T 21-04-2016 IPR023614 Porin domain VFU_RS09280 daf0baf7165be79f93e180930d69d933 250 Pfam PF13545 Crp-like helix-turn-helix domain 168 241 1.4E-17 T 21-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VFU_RS09280 daf0baf7165be79f93e180930d69d933 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 2.6E-11 T 21-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VFU_RS09280 daf0baf7165be79f93e180930d69d933 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 2.6E-11 T 21-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VFU_RS09280 daf0baf7165be79f93e180930d69d933 250 SMART SM00419 187 235 4.3E-15 T 21-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VFU_RS09280 daf0baf7165be79f93e180930d69d933 250 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 6.7E-15 T 21-04-2016 IPR000595 Cyclic nucleotide-binding domain VFU_RS09280 daf0baf7165be79f93e180930d69d933 250 Gene3D G3DSA:1.10.10.10 170 244 4.2E-27 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS09280 daf0baf7165be79f93e180930d69d933 250 PANTHER PTHR24567 1 244 1.3E-132 T 21-04-2016 VFU_RS09280 daf0baf7165be79f93e180930d69d933 250 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 21-04-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 VFU_RS09280 daf0baf7165be79f93e180930d69d933 250 SUPERFAMILY SSF51206 23 162 2.49E-31 T 21-04-2016 IPR018490 Cyclic nucleotide-binding-like VFU_RS09280 daf0baf7165be79f93e180930d69d933 250 SMART SM00100 30 151 1.7E-20 T 21-04-2016 IPR000595 Cyclic nucleotide-binding domain VFU_RS09280 daf0baf7165be79f93e180930d69d933 250 PANTHER PTHR24567:SF28 1 244 1.3E-132 T 21-04-2016 VFU_RS09280 daf0baf7165be79f93e180930d69d933 250 SUPERFAMILY SSF46785 165 244 2.54E-21 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS09280 daf0baf7165be79f93e180930d69d933 250 Gene3D G3DSA:2.60.120.10 18 169 4.7E-41 T 21-04-2016 IPR014710 RmlC-like jelly roll fold VFU_RS03435 36296a2f9550ff95795c2fddaef15ba7 150 Gene3D G3DSA:3.40.630.30 2 148 8.7E-49 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase VFU_RS03435 36296a2f9550ff95795c2fddaef15ba7 150 Pfam PF13673 Acetyltransferase (GNAT) domain 46 148 1.5E-16 T 21-04-2016 IPR000182 GNAT domain GO:0008080 VFU_RS03435 36296a2f9550ff95795c2fddaef15ba7 150 PANTHER PTHR23091:SF275 9 149 9.0E-43 T 21-04-2016 VFU_RS03435 36296a2f9550ff95795c2fddaef15ba7 150 PANTHER PTHR23091 9 149 9.0E-43 T 21-04-2016 VFU_RS03435 36296a2f9550ff95795c2fddaef15ba7 150 SUPERFAMILY SSF55729 1 149 3.84E-35 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase VFU_RS05840 26e872e81eba3c8b68466c9120fdbf83 335 Gene3D G3DSA:3.40.50.2300 167 331 1.0E-50 T 21-04-2016 VFU_RS05840 26e872e81eba3c8b68466c9120fdbf83 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 4.4E-7 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VFU_RS05840 26e872e81eba3c8b68466c9120fdbf83 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 4.4E-7 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VFU_RS05840 26e872e81eba3c8b68466c9120fdbf83 335 SUPERFAMILY SSF53822 61 331 4.93E-79 T 21-04-2016 IPR028082 Periplasmic binding protein-like I VFU_RS05840 26e872e81eba3c8b68466c9120fdbf83 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VFU_RS05840 26e872e81eba3c8b68466c9120fdbf83 335 Gene3D G3DSA:1.10.260.40 2 57 2.5E-23 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VFU_RS05840 26e872e81eba3c8b68466c9120fdbf83 335 PANTHER PTHR30146 1 330 1.4E-167 T 21-04-2016 VFU_RS05840 26e872e81eba3c8b68466c9120fdbf83 335 PANTHER PTHR30146:SF55 1 330 1.4E-167 T 21-04-2016 VFU_RS05840 26e872e81eba3c8b68466c9120fdbf83 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.3E-18 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VFU_RS05840 26e872e81eba3c8b68466c9120fdbf83 335 SUPERFAMILY SSF47413 1 60 2.73E-16 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VFU_RS05840 26e872e81eba3c8b68466c9120fdbf83 335 SMART SM00354 1 71 5.3E-32 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VFU_RS05840 26e872e81eba3c8b68466c9120fdbf83 335 Pfam PF13377 Periplasmic binding protein-like domain 168 330 6.4E-34 T 21-04-2016 VFU_RS05840 26e872e81eba3c8b68466c9120fdbf83 335 Gene3D G3DSA:3.40.50.2300 58 166 4.9E-49 T 21-04-2016 VFU_RS13050 2076d1a5be4d5fa8d0637fde8aae0931 132 Pfam PF04241 Protein of unknown function (DUF423) 20 110 1.2E-29 T 21-04-2016 IPR006696 Protein of unknown function DUF423 VFU_RS13050 2076d1a5be4d5fa8d0637fde8aae0931 132 PANTHER PTHR10584 6 67 1.4E-17 T 21-04-2016 VFU_RS13050 2076d1a5be4d5fa8d0637fde8aae0931 132 PANTHER PTHR10584:SF191 6 67 1.4E-17 T 21-04-2016 VFU_RS08895 761b86a77cac91df901e5441a31977b2 139 Gene3D G3DSA:1.10.10.10 5 138 5.9E-35 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS08895 761b86a77cac91df901e5441a31977b2 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 79 1.7E-10 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VFU_RS08895 761b86a77cac91df901e5441a31977b2 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 99 1.7E-10 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VFU_RS08895 761b86a77cac91df901e5441a31977b2 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 133 1.7E-10 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VFU_RS08895 761b86a77cac91df901e5441a31977b2 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 47 63 1.7E-10 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VFU_RS08895 761b86a77cac91df901e5441a31977b2 139 SMART SM00347 23 123 2.4E-18 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VFU_RS08895 761b86a77cac91df901e5441a31977b2 139 SUPERFAMILY SSF46785 5 138 3.43E-29 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS08895 761b86a77cac91df901e5441a31977b2 139 Pfam PF01047 MarR family 30 87 1.6E-15 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VFU_RS08895 761b86a77cac91df901e5441a31977b2 139 PANTHER PTHR33164 6 139 1.2E-23 T 21-04-2016 VFU_RS00775 2fd1eeee2234f41e42bb320305e4c6c9 421 SUPERFAMILY SSF53756 50 404 2.2E-14 T 21-04-2016 VFU_RS00775 2fd1eeee2234f41e42bb320305e4c6c9 421 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 33 209 1.2E-58 T 21-04-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 VFU_RS00775 2fd1eeee2234f41e42bb320305e4c6c9 421 PANTHER PTHR23417 188 419 1.0E-110 T 21-04-2016 VFU_RS00775 2fd1eeee2234f41e42bb320305e4c6c9 421 PANTHER PTHR23417 128 138 1.0E-110 T 21-04-2016 VFU_RS00775 2fd1eeee2234f41e42bb320305e4c6c9 421 PANTHER PTHR23417 1 109 1.0E-110 T 21-04-2016 VFU_RS00775 2fd1eeee2234f41e42bb320305e4c6c9 421 PANTHER PTHR23417:SF2 188 419 1.0E-110 T 21-04-2016 VFU_RS00775 2fd1eeee2234f41e42bb320305e4c6c9 421 PANTHER PTHR23417:SF2 128 138 1.0E-110 T 21-04-2016 VFU_RS00775 2fd1eeee2234f41e42bb320305e4c6c9 421 PANTHER PTHR23417:SF2 1 109 1.0E-110 T 21-04-2016 VFU_RS07320 389c7dadbc9e080f9cd01d24dbea2493 268 PANTHER PTHR24220 10 265 1.3E-151 T 21-04-2016 VFU_RS07320 389c7dadbc9e080f9cd01d24dbea2493 268 SMART SM00382 33 230 7.7E-15 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS07320 389c7dadbc9e080f9cd01d24dbea2493 268 SUPERFAMILY SSF52540 9 235 8.74E-63 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS07320 389c7dadbc9e080f9cd01d24dbea2493 268 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS07320 389c7dadbc9e080f9cd01d24dbea2493 268 Pfam PF00005 ABC transporter 25 172 4.3E-31 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS07320 389c7dadbc9e080f9cd01d24dbea2493 268 Gene3D G3DSA:3.40.50.300 9 240 7.9E-65 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS07320 389c7dadbc9e080f9cd01d24dbea2493 268 PANTHER PTHR24220:SF438 10 265 1.3E-151 T 21-04-2016 VFU_RS06285 e7449dd9473bbe5be28c58889335ce54 222 PIRSF PIRSF002764 1 222 2.1E-84 T 21-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria VFU_RS06285 e7449dd9473bbe5be28c58889335ce54 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 103 121 5.04E-71 T 21-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VFU_RS06285 e7449dd9473bbe5be28c58889335ce54 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 195 218 5.04E-71 T 21-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VFU_RS06285 e7449dd9473bbe5be28c58889335ce54 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 29 50 5.04E-71 T 21-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VFU_RS06285 e7449dd9473bbe5be28c58889335ce54 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 78 101 5.04E-71 T 21-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VFU_RS06285 e7449dd9473bbe5be28c58889335ce54 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 55 72 5.04E-71 T 21-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VFU_RS06285 e7449dd9473bbe5be28c58889335ce54 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 158 177 5.04E-71 T 21-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VFU_RS06285 e7449dd9473bbe5be28c58889335ce54 222 PANTHER PTHR30070:SF1 2 222 1.5E-73 T 21-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VFU_RS06285 e7449dd9473bbe5be28c58889335ce54 222 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 8 218 3.2E-94 T 21-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria VFU_RS06285 e7449dd9473bbe5be28c58889335ce54 222 Pfam PF03379 CcmB protein 5 219 1.1E-91 T 21-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VFU_RS06285 e7449dd9473bbe5be28c58889335ce54 222 PANTHER PTHR30070 2 222 1.5E-73 T 21-04-2016 VFU_RS05050 0c14803b9e5d55d4e783398e9dee051e 428 PANTHER PTHR37839:SF1 1 428 1.4E-210 T 21-04-2016 VFU_RS05050 0c14803b9e5d55d4e783398e9dee051e 428 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 428 6.7E-199 T 21-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 VFU_RS05050 0c14803b9e5d55d4e783398e9dee051e 428 Pfam PF11973 NQRA C-terminal domain 243 292 3.2E-21 T 21-04-2016 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 VFU_RS05050 0c14803b9e5d55d4e783398e9dee051e 428 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 428 43.253 T 21-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 VFU_RS05050 0c14803b9e5d55d4e783398e9dee051e 428 PANTHER PTHR37839 1 428 1.4E-210 T 21-04-2016 VFU_RS05050 0c14803b9e5d55d4e783398e9dee051e 428 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 2 238 1.0E-103 T 21-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 VFU_RS09170 e59877242fa4194bf22ce59a0dc5e0b8 279 PANTHER PTHR30592:SF2 1 278 3.2E-183 T 21-04-2016 VFU_RS09170 e59877242fa4194bf22ce59a0dc5e0b8 279 Gene3D G3DSA:3.40.140.10 133 270 2.9E-52 T 21-04-2016 VFU_RS09170 e59877242fa4194bf22ce59a0dc5e0b8 279 PANTHER PTHR30592 1 278 3.2E-183 T 21-04-2016 VFU_RS09170 e59877242fa4194bf22ce59a0dc5e0b8 279 SUPERFAMILY SSF53927 15 266 3.31E-71 T 21-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 VFU_RS09170 e59877242fa4194bf22ce59a0dc5e0b8 279 Gene3D G3DSA:3.10.20.10 36 118 4.5E-17 T 21-04-2016 VFU_RS09170 e59877242fa4194bf22ce59a0dc5e0b8 279 PIRSF PIRSF015626 1 271 3.0E-99 T 21-04-2016 IPR003786 Protein FdhD GO:0016783 VFU_RS09170 e59877242fa4194bf22ce59a0dc5e0b8 279 Pfam PF02634 FdhD/NarQ family 35 266 2.1E-74 T 21-04-2016 IPR003786 Protein FdhD GO:0016783 VFU_RS06015 f95b3b38b7ed433ce4411018fba50ae5 207 Pfam PF03458 UPF0126 domain 5 78 9.3E-20 T 21-04-2016 IPR005115 Uncharacterised domain UPF0126 VFU_RS06015 f95b3b38b7ed433ce4411018fba50ae5 207 Pfam PF03458 UPF0126 domain 92 162 1.5E-18 T 21-04-2016 IPR005115 Uncharacterised domain UPF0126 VFU_RS06015 f95b3b38b7ed433ce4411018fba50ae5 207 PANTHER PTHR30506 1 207 2.4E-119 T 21-04-2016 VFU_RS06015 f95b3b38b7ed433ce4411018fba50ae5 207 PANTHER PTHR30506:SF2 1 207 2.4E-119 T 21-04-2016 VFU_RS04255 4765c3599760c09f1566dd78be5aab4f 246 Pfam PF07072 Protein of unknown function (DUF1342) 18 224 4.0E-75 T 21-04-2016 IPR009777 Cell division protein ZapD VFU_RS04255 4765c3599760c09f1566dd78be5aab4f 246 Gene3D G3DSA:2.60.440.10 173 245 2.0E-31 T 21-04-2016 IPR027462 Z ring-associated protein D, C-terminal domain VFU_RS04255 4765c3599760c09f1566dd78be5aab4f 246 PANTHER PTHR39455 1 246 3.3E-111 T 21-04-2016 VFU_RS04255 4765c3599760c09f1566dd78be5aab4f 246 Hamap MF_01092 Cell division protein ZapD [zapD]. 3 245 32.275 T 21-04-2016 IPR009777 Cell division protein ZapD VFU_RS04255 4765c3599760c09f1566dd78be5aab4f 246 PANTHER PTHR39455:SF1 1 246 3.3E-111 T 21-04-2016 VFU_RS04255 4765c3599760c09f1566dd78be5aab4f 246 Gene3D G3DSA:1.10.3900.10 12 172 1.8E-62 T 21-04-2016 VFU_RS04255 4765c3599760c09f1566dd78be5aab4f 246 SUPERFAMILY SSF160950 1 245 1.57E-90 T 21-04-2016 VFU_RS14380 460f0ac8341a8a18371cfd8e416ba00d 459 SMART SM00963 1 86 1.4E-36 T 21-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 VFU_RS14380 460f0ac8341a8a18371cfd8e416ba00d 459 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 2.6E-22 T 21-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 VFU_RS14380 460f0ac8341a8a18371cfd8e416ba00d 459 SMART SM00962 100 296 5.9E-115 T 21-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 VFU_RS14380 460f0ac8341a8a18371cfd8e416ba00d 459 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 21-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 VFU_RS14380 460f0ac8341a8a18371cfd8e416ba00d 459 Gene3D G3DSA:3.40.50.300 93 297 1.4E-77 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS14380 460f0ac8341a8a18371cfd8e416ba00d 459 PANTHER PTHR11564:SF7 1 435 1.3E-273 T 21-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 VFU_RS14380 460f0ac8341a8a18371cfd8e416ba00d 459 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 5.3E-180 T 21-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 VFU_RS14380 460f0ac8341a8a18371cfd8e416ba00d 459 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 4.2E-74 T 21-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 VFU_RS14380 460f0ac8341a8a18371cfd8e416ba00d 459 Pfam PF02978 Signal peptide binding domain 329 427 1.4E-33 T 21-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 VFU_RS14380 460f0ac8341a8a18371cfd8e416ba00d 459 SUPERFAMILY SSF47446 329 430 2.94E-38 T 21-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 VFU_RS14380 460f0ac8341a8a18371cfd8e416ba00d 459 SMART SM00382 99 247 1.4E-9 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS14380 460f0ac8341a8a18371cfd8e416ba00d 459 Gene3D G3DSA:1.10.260.30 329 432 1.3E-41 T 21-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 VFU_RS14380 460f0ac8341a8a18371cfd8e416ba00d 459 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 34.334 T 21-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 VFU_RS14380 460f0ac8341a8a18371cfd8e416ba00d 459 SUPERFAMILY SSF52540 42 353 8.76E-57 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS14380 460f0ac8341a8a18371cfd8e416ba00d 459 Gene3D G3DSA:1.20.120.140 2 89 1.5E-35 T 21-04-2016 VFU_RS14380 460f0ac8341a8a18371cfd8e416ba00d 459 PANTHER PTHR11564 1 435 1.3E-273 T 21-04-2016 VFU_RS06185 1790530bbb8bf8f31daa1082dac6ebdf 756 Pfam PF07670 Nucleoside recognition 349 440 1.6E-13 T 21-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 VFU_RS06185 1790530bbb8bf8f31daa1082dac6ebdf 756 Pfam PF07670 Nucleoside recognition 509 689 1.9E-36 T 21-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 VFU_RS06185 1790530bbb8bf8f31daa1082dac6ebdf 756 Pfam PF07664 Ferrous iron transport protein B C terminus 452 504 4.6E-20 T 21-04-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 VFU_RS06185 1790530bbb8bf8f31daa1082dac6ebdf 756 PANTHER PTHR11649:SF37 657 724 2.3E-252 T 21-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 VFU_RS06185 1790530bbb8bf8f31daa1082dac6ebdf 756 PANTHER PTHR11649:SF37 260 608 2.3E-252 T 21-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 VFU_RS06185 1790530bbb8bf8f31daa1082dac6ebdf 756 PANTHER PTHR11649:SF37 4 149 2.3E-252 T 21-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 VFU_RS06185 1790530bbb8bf8f31daa1082dac6ebdf 756 Gene3D G3DSA:3.40.50.300 4 168 5.5E-33 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS06185 1790530bbb8bf8f31daa1082dac6ebdf 756 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 9 686 1.2E-178 T 21-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 VFU_RS06185 1790530bbb8bf8f31daa1082dac6ebdf 756 PANTHER PTHR11649 657 724 2.3E-252 T 21-04-2016 VFU_RS06185 1790530bbb8bf8f31daa1082dac6ebdf 756 PANTHER PTHR11649 260 608 2.3E-252 T 21-04-2016 VFU_RS06185 1790530bbb8bf8f31daa1082dac6ebdf 756 PANTHER PTHR11649 4 149 2.3E-252 T 21-04-2016 VFU_RS06185 1790530bbb8bf8f31daa1082dac6ebdf 756 Pfam PF02421 Ferrous iron transport protein B 4 161 6.0E-57 T 21-04-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 VFU_RS06185 1790530bbb8bf8f31daa1082dac6ebdf 756 SUPERFAMILY SSF52540 4 172 3.11E-37 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS04515 16575024ef76f19066cfedc34c36f579 113 Pfam PF01521 Iron-sulphur cluster biosynthesis 8 108 2.8E-19 T 21-04-2016 IPR000361 FeS cluster biogenesis VFU_RS04515 16575024ef76f19066cfedc34c36f579 113 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 94 111 - T 21-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site VFU_RS04515 16575024ef76f19066cfedc34c36f579 113 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 113 3.8E-37 T 21-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 VFU_RS04515 16575024ef76f19066cfedc34c36f579 113 PANTHER PTHR10072 8 113 1.5E-46 T 21-04-2016 VFU_RS04515 16575024ef76f19066cfedc34c36f579 113 Gene3D G3DSA:2.60.300.12 6 99 1.9E-31 T 21-04-2016 IPR000361 FeS cluster biogenesis VFU_RS04515 16575024ef76f19066cfedc34c36f579 113 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 113 35.835 T 21-04-2016 IPR023063 FeS cluster insertion protein ErpA GO:0016226 VFU_RS04515 16575024ef76f19066cfedc34c36f579 113 SUPERFAMILY SSF89360 8 102 7.26E-30 T 21-04-2016 IPR000361 FeS cluster biogenesis VFU_RS00995 27f359be9878ab17e394a3fedccde2c6 346 SUPERFAMILY SSF53098 219 315 1.14E-7 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VFU_RS00995 27f359be9878ab17e394a3fedccde2c6 346 Pfam PF13551 Winged helix-turn helix 32 87 4.5E-8 T 21-04-2016 VFU_RS00995 27f359be9878ab17e394a3fedccde2c6 346 Pfam PF13358 DDE superfamily endonuclease 167 309 6.2E-35 T 21-04-2016 VFU_RS00995 27f359be9878ab17e394a3fedccde2c6 346 Pfam PF13592 Winged helix-turn helix 98 156 2.0E-21 T 21-04-2016 IPR025959 Winged helix-turn helix domain VFU_RS00995 27f359be9878ab17e394a3fedccde2c6 346 SUPERFAMILY SSF46689 15 131 2.87E-25 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS07995 c839c1662949038fa0eae1f891adc22e 243 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 10 240 49.887 T 21-04-2016 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 VFU_RS07995 c839c1662949038fa0eae1f891adc22e 243 Pfam PF04288 MukE-like family 10 235 8.1E-120 T 21-04-2016 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 VFU_RS00605 b15848360fe80e1b6e8e7328dfdb45fb 247 SUPERFAMILY SSF51735 3 243 3.01E-53 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS00605 b15848360fe80e1b6e8e7328dfdb45fb 247 Gene3D G3DSA:3.40.50.720 3 243 4.1E-54 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS00605 b15848360fe80e1b6e8e7328dfdb45fb 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.0E-25 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS00605 b15848360fe80e1b6e8e7328dfdb45fb 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 2.0E-25 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS00605 b15848360fe80e1b6e8e7328dfdb45fb 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 2.0E-25 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS00605 b15848360fe80e1b6e8e7328dfdb45fb 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 2.0E-25 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS00605 b15848360fe80e1b6e8e7328dfdb45fb 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 2.0E-25 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS00605 b15848360fe80e1b6e8e7328dfdb45fb 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 2.0E-25 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS00605 b15848360fe80e1b6e8e7328dfdb45fb 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 3.3E-5 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS00605 b15848360fe80e1b6e8e7328dfdb45fb 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 3.3E-5 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS00605 b15848360fe80e1b6e8e7328dfdb45fb 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 3.3E-5 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS00605 b15848360fe80e1b6e8e7328dfdb45fb 247 PANTHER PTHR24322:SF57 7 135 2.2E-26 T 21-04-2016 VFU_RS00605 b15848360fe80e1b6e8e7328dfdb45fb 247 PANTHER PTHR24322:SF57 151 183 2.2E-26 T 21-04-2016 VFU_RS00605 b15848360fe80e1b6e8e7328dfdb45fb 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 242 8.3E-43 T 21-04-2016 VFU_RS00605 b15848360fe80e1b6e8e7328dfdb45fb 247 PANTHER PTHR24322 7 135 2.2E-26 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS00605 b15848360fe80e1b6e8e7328dfdb45fb 247 PANTHER PTHR24322 151 183 2.2E-26 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS04425 def24a8684d8092a0d8703f55e452599 409 SUPERFAMILY SSF111352 12 383 4.32E-106 T 21-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 VFU_RS04425 def24a8684d8092a0d8703f55e452599 409 TIGRFAM TIGR03644 marine_trans_1: probable ammonium transporter, marine subtype 12 405 6.6E-204 T 21-04-2016 IPR019879 Ammonium transporter, marine subtype VFU_RS04425 def24a8684d8092a0d8703f55e452599 409 PANTHER PTHR11730:SF6 2 76 1.4E-143 T 21-04-2016 VFU_RS04425 def24a8684d8092a0d8703f55e452599 409 PANTHER PTHR11730:SF6 95 404 1.4E-143 T 21-04-2016 VFU_RS04425 def24a8684d8092a0d8703f55e452599 409 PANTHER PTHR11730 2 76 1.4E-143 T 21-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 VFU_RS04425 def24a8684d8092a0d8703f55e452599 409 PANTHER PTHR11730 95 404 1.4E-143 T 21-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 VFU_RS04425 def24a8684d8092a0d8703f55e452599 409 ProSitePatterns PS01219 Ammonium transporters signature. 163 188 - T 21-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 VFU_RS04425 def24a8684d8092a0d8703f55e452599 409 Gene3D G3DSA:1.10.3430.10 27 398 2.0E-108 T 21-04-2016 IPR029020 Ammonium/urea transporter VFU_RS04425 def24a8684d8092a0d8703f55e452599 409 Pfam PF00909 Ammonium Transporter Family 18 398 7.0E-100 T 21-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 VFU_RS03105 90baf7d7887158d85f55d3722979459b 334 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 3 221 1.5E-71 T 21-04-2016 IPR005883 Type IV pilus assembly protein PilM VFU_RS03105 90baf7d7887158d85f55d3722979459b 334 Pfam PF11104 Type IV pilus assembly protein PilM; 239 324 5.0E-10 T 21-04-2016 IPR005883 Type IV pilus assembly protein PilM VFU_RS03105 90baf7d7887158d85f55d3722979459b 334 Pfam PF11104 Type IV pilus assembly protein PilM; 8 218 1.5E-33 T 21-04-2016 IPR005883 Type IV pilus assembly protein PilM VFU_RS03105 90baf7d7887158d85f55d3722979459b 334 SUPERFAMILY SSF53067 5 161 2.1E-5 T 21-04-2016 VFU_RS03105 90baf7d7887158d85f55d3722979459b 334 PANTHER PTHR32432:SF3 1 329 1.4E-52 T 21-04-2016 VFU_RS03105 90baf7d7887158d85f55d3722979459b 334 PANTHER PTHR32432 1 329 1.4E-52 T 21-04-2016 VFU_RS03105 90baf7d7887158d85f55d3722979459b 334 Gene3D G3DSA:3.30.420.40 3 99 1.6E-5 T 21-04-2016 VFU_RS03105 90baf7d7887158d85f55d3722979459b 334 Gene3D G3DSA:3.30.420.40 185 290 7.1E-6 T 21-04-2016 VFU_RS09045 4b1668f687022195e6332707d8b56ee5 392 Gene3D G3DSA:1.25.40.10 268 372 9.8E-10 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VFU_RS09045 4b1668f687022195e6332707d8b56ee5 392 PANTHER PTHR23083 33 148 1.5E-18 T 21-04-2016 VFU_RS09045 4b1668f687022195e6332707d8b56ee5 392 PANTHER PTHR23083 184 372 1.5E-18 T 21-04-2016 VFU_RS09045 4b1668f687022195e6332707d8b56ee5 392 SMART SM00028 137 170 440.0 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VFU_RS09045 4b1668f687022195e6332707d8b56ee5 392 SMART SM00028 338 371 66.0 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VFU_RS09045 4b1668f687022195e6332707d8b56ee5 392 SMART SM00028 100 133 29.0 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VFU_RS09045 4b1668f687022195e6332707d8b56ee5 392 SMART SM00028 274 307 66.0 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VFU_RS09045 4b1668f687022195e6332707d8b56ee5 392 SUPERFAMILY SSF48452 32 227 8.73E-13 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VFU_RS09045 4b1668f687022195e6332707d8b56ee5 392 Pfam PF13432 Tetratricopeptide repeat 105 163 1.9E-4 T 21-04-2016 VFU_RS09045 4b1668f687022195e6332707d8b56ee5 392 SUPERFAMILY SSF48452 267 372 6.64E-10 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VFU_RS09045 4b1668f687022195e6332707d8b56ee5 392 Gene3D G3DSA:1.25.40.10 120 229 3.9E-13 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VFU_RS09045 4b1668f687022195e6332707d8b56ee5 392 Gene3D G3DSA:1.25.40.10 25 119 1.4E-5 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VFU_RS06070 95fa65e96746a7feb2c7e355e14f212d 127 PANTHER PTHR33931 3 127 3.8E-58 T 21-04-2016 VFU_RS06070 95fa65e96746a7feb2c7e355e14f212d 127 PANTHER PTHR33931:SF3 3 127 3.8E-58 T 21-04-2016 VFU_RS06070 95fa65e96746a7feb2c7e355e14f212d 127 Pfam PF03788 LrgA family 13 106 8.2E-29 T 21-04-2016 IPR005538 LrgA/CidA family GO:0016021 VFU_RS00980 da52cbede0d4fe90b3db105486ccc5f8 445 Pfam PF00512 His Kinase A (phospho-acceptor) domain 224 288 6.1E-12 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS00980 da52cbede0d4fe90b3db105486ccc5f8 445 PANTHER PTHR24423:SF354 163 440 2.1E-84 T 21-04-2016 VFU_RS00980 da52cbede0d4fe90b3db105486ccc5f8 445 PANTHER PTHR24423:SF354 3 9 2.1E-84 T 21-04-2016 VFU_RS00980 da52cbede0d4fe90b3db105486ccc5f8 445 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 332 442 1.1E-17 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS00980 da52cbede0d4fe90b3db105486ccc5f8 445 Gene3D G3DSA:1.10.287.130 213 276 1.2E-10 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS00980 da52cbede0d4fe90b3db105486ccc5f8 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 369 383 3.3E-8 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS00980 da52cbede0d4fe90b3db105486ccc5f8 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 423 3.3E-8 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS00980 da52cbede0d4fe90b3db105486ccc5f8 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 397 3.3E-8 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS00980 da52cbede0d4fe90b3db105486ccc5f8 445 Pfam PF00672 HAMP domain 149 219 1.0E-6 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS00980 da52cbede0d4fe90b3db105486ccc5f8 445 SMART SM00387 332 444 4.7E-29 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS00980 da52cbede0d4fe90b3db105486ccc5f8 445 Gene3D G3DSA:3.30.565.10 277 442 1.4E-33 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS00980 da52cbede0d4fe90b3db105486ccc5f8 445 PANTHER PTHR24423 163 440 2.1E-84 T 21-04-2016 VFU_RS00980 da52cbede0d4fe90b3db105486ccc5f8 445 PANTHER PTHR24423 3 9 2.1E-84 T 21-04-2016 VFU_RS00980 da52cbede0d4fe90b3db105486ccc5f8 445 SMART SM00388 223 289 1.1E-13 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS00980 da52cbede0d4fe90b3db105486ccc5f8 445 SUPERFAMILY SSF55874 279 441 1.57E-32 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS00980 da52cbede0d4fe90b3db105486ccc5f8 445 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 7 440 5.9E-113 T 21-04-2016 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 VFU_RS00980 da52cbede0d4fe90b3db105486ccc5f8 445 SUPERFAMILY SSF47384 206 288 1.37E-14 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS08185 71fe082b8b8b9e2ba5cb7ff3831480c5 186 Gene3D G3DSA:1.10.340.30 7 184 3.6E-80 T 21-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 VFU_RS08185 71fe082b8b8b9e2ba5cb7ff3831480c5 186 SUPERFAMILY SSF48150 7 184 8.63E-76 T 21-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 VFU_RS08185 71fe082b8b8b9e2ba5cb7ff3831480c5 186 Pfam PF03352 Methyladenine glycosylase 10 185 7.0E-76 T 21-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 VFU_RS08185 71fe082b8b8b9e2ba5cb7ff3831480c5 186 PANTHER PTHR30037:SF4 8 184 2.9E-105 T 21-04-2016 VFU_RS08185 71fe082b8b8b9e2ba5cb7ff3831480c5 186 PANTHER PTHR30037 8 184 2.9E-105 T 21-04-2016 VFU_RS12700 b2e1decd9ecee9e48c5bd53f5a113636 183 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 158 3.3E-24 T 21-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type VFU_RS12700 b2e1decd9ecee9e48c5bd53f5a113636 183 PANTHER PTHR11124 1 151 9.5E-55 T 21-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 VFU_RS12700 b2e1decd9ecee9e48c5bd53f5a113636 183 ProSitePatterns PS01269 Uncharacterized protein family UPF0025 signature. 121 145 - T 21-04-2016 IPR020935 Phosphodiesterase YfcE, conserved site KEGG: 00564+3.1.4.-|KEGG: 00565+3.1.4.- VFU_RS12700 b2e1decd9ecee9e48c5bd53f5a113636 183 PANTHER PTHR11124:SF14 1 151 9.5E-55 T 21-04-2016 VFU_RS12700 b2e1decd9ecee9e48c5bd53f5a113636 183 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 168 8.7E-31 T 21-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 VFU_RS12700 b2e1decd9ecee9e48c5bd53f5a113636 183 SUPERFAMILY SSF56300 1 164 1.06E-35 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like VFU_RS12700 b2e1decd9ecee9e48c5bd53f5a113636 183 Gene3D G3DSA:3.60.21.10 1 162 2.3E-43 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like VFU_RS05510 3afe87b848b301b777c4a157436e5a17 308 SMART SM00448 182 302 1.3E-19 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS05510 3afe87b848b301b777c4a157436e5a17 308 Pfam PF01584 CheW-like domain 21 155 1.2E-34 T 21-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VFU_RS05510 3afe87b848b301b777c4a157436e5a17 308 SUPERFAMILY SSF52172 183 306 1.85E-25 T 21-04-2016 IPR011006 CheY-like superfamily VFU_RS05510 3afe87b848b301b777c4a157436e5a17 308 PIRSF PIRSF002867 1 308 5.1E-104 T 21-04-2016 IPR024181 Chemotaxis response regulator CheV VFU_RS05510 3afe87b848b301b777c4a157436e5a17 308 SMART SM00260 17 153 2.7E-24 T 21-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VFU_RS05510 3afe87b848b301b777c4a157436e5a17 308 Pfam PF00072 Response regulator receiver domain 184 302 1.4E-18 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS05510 3afe87b848b301b777c4a157436e5a17 308 PANTHER PTHR22617:SF30 1 169 6.8E-107 T 21-04-2016 VFU_RS05510 3afe87b848b301b777c4a157436e5a17 308 PANTHER PTHR22617 1 169 6.8E-107 T 21-04-2016 VFU_RS05510 3afe87b848b301b777c4a157436e5a17 308 Gene3D G3DSA:2.30.30.40 88 145 4.6E-4 T 21-04-2016 VFU_RS05510 3afe87b848b301b777c4a157436e5a17 308 SUPERFAMILY SSF50341 16 157 7.59E-36 T 21-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VFU_RS05510 3afe87b848b301b777c4a157436e5a17 308 Gene3D G3DSA:3.40.50.2300 182 306 4.2E-27 T 21-04-2016 VFU_RS09470 2a7ebc1b5f93e42840ca0619ba5811cc 209 SUPERFAMILY SSF48657 5 117 3.92E-38 T 21-04-2016 IPR016103 ProQ/FinO domain VFU_RS09470 2a7ebc1b5f93e42840ca0619ba5811cc 209 PANTHER PTHR38106:SF1 1 209 3.2E-81 T 21-04-2016 VFU_RS09470 2a7ebc1b5f93e42840ca0619ba5811cc 209 PANTHER PTHR38106 1 209 3.2E-81 T 21-04-2016 VFU_RS09470 2a7ebc1b5f93e42840ca0619ba5811cc 209 Pfam PF04352 ProQ/FINO family 8 115 1.7E-41 T 21-04-2016 IPR016103 ProQ/FinO domain VFU_RS09470 2a7ebc1b5f93e42840ca0619ba5811cc 209 Gene3D G3DSA:1.10.1710.10 3 118 3.4E-36 T 21-04-2016 IPR016103 ProQ/FinO domain VFU_RS09470 2a7ebc1b5f93e42840ca0619ba5811cc 209 SMART SM00945 5 119 3.2E-60 T 21-04-2016 IPR016103 ProQ/FinO domain VFU_RS09470 2a7ebc1b5f93e42840ca0619ba5811cc 209 Hamap MF_00749 RNA chaperone ProQ [proQ]. 3 209 29.794 T 21-04-2016 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 VFU_RS11740 1263b03c85249cf3b18bbe022ca2335c 389 SUPERFAMILY SSF81901 39 273 5.23E-18 T 21-04-2016 VFU_RS11740 1263b03c85249cf3b18bbe022ca2335c 389 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 387 37.262 T 21-04-2016 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 VFU_RS11740 1263b03c85249cf3b18bbe022ca2335c 389 Gene3D G3DSA:1.25.40.10 33 279 3.7E-29 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VFU_RS11740 1263b03c85249cf3b18bbe022ca2335c 389 PANTHER PTHR23083 8 322 2.0E-34 T 21-04-2016 VFU_RS11740 1263b03c85249cf3b18bbe022ca2335c 389 SMART SM00028 141 174 140.0 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VFU_RS11740 1263b03c85249cf3b18bbe022ca2335c 389 SMART SM00028 180 213 0.76 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VFU_RS11740 1263b03c85249cf3b18bbe022ca2335c 389 SMART SM00028 214 247 20.0 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VFU_RS11740 1263b03c85249cf3b18bbe022ca2335c 389 SMART SM00028 69 102 81.0 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VFU_RS11740 1263b03c85249cf3b18bbe022ca2335c 389 Pfam PF13176 Tetratricopeptide repeat 71 94 0.03 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VFU_RS08440 7e11bd4e1293af4bedf16b4527cfb746 961 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 533 893 9.4E-65 T 21-04-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 VFU_RS08440 7e11bd4e1293af4bedf16b4527cfb746 961 PANTHER PTHR11999 485 959 1.9E-172 T 21-04-2016 VFU_RS08440 7e11bd4e1293af4bedf16b4527cfb746 961 PANTHER PTHR11999:SF106 485 959 1.9E-172 T 21-04-2016 VFU_RS08440 7e11bd4e1293af4bedf16b4527cfb746 961 Gene3D G3DSA:3.40.640.10 88 338 4.1E-66 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VFU_RS08440 7e11bd4e1293af4bedf16b4527cfb746 961 Gene3D G3DSA:3.40.640.10 572 845 1.0E-87 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VFU_RS08440 7e11bd4e1293af4bedf16b4527cfb746 961 SUPERFAMILY SSF53383 42 464 6.68E-112 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VFU_RS08440 7e11bd4e1293af4bedf16b4527cfb746 961 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 34 465 1.4E-156 T 21-04-2016 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|UniPathway: UPA00067 VFU_RS08440 7e11bd4e1293af4bedf16b4527cfb746 961 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 780 801 - T 21-04-2016 IPR021115 Pyridoxal-phosphate binding site GO:0016831 VFU_RS08440 7e11bd4e1293af4bedf16b4527cfb746 961 SUPERFAMILY SSF53383 513 959 1.15E-111 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VFU_RS08440 7e11bd4e1293af4bedf16b4527cfb746 961 Gene3D G3DSA:3.90.1150.10 339 463 9.2E-42 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VFU_RS08440 7e11bd4e1293af4bedf16b4527cfb746 961 Pfam PF00202 Aminotransferase class-III 51 464 1.1E-93 T 21-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VFU_RS08440 7e11bd4e1293af4bedf16b4527cfb746 961 Gene3D G3DSA:3.90.1150.10 846 959 7.4E-41 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VFU_RS08440 7e11bd4e1293af4bedf16b4527cfb746 961 Gene3D G3DSA:1.20.1650.10 464 561 1.1E-40 T 21-04-2016 VFU_RS04525 808f5385c493b3a72e829ca477622cce 1026 Gene3D G3DSA:3.30.70.1430 41 136 5.1E-24 T 21-04-2016 VFU_RS04525 808f5385c493b3a72e829ca477622cce 1026 SUPERFAMILY SSF82866 290 491 6.02E-40 T 21-04-2016 VFU_RS04525 808f5385c493b3a72e829ca477622cce 1026 SUPERFAMILY SSF82714 184 263 6.54E-11 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VFU_RS04525 808f5385c493b3a72e829ca477622cce 1026 Gene3D G3DSA:3.30.2090.10 185 263 1.3E-9 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VFU_RS04525 808f5385c493b3a72e829ca477622cce 1026 SUPERFAMILY SSF82693 143 181 2.04E-11 T 21-04-2016 VFU_RS04525 808f5385c493b3a72e829ca477622cce 1026 SUPERFAMILY SSF82693 267 325 2.04E-11 T 21-04-2016 VFU_RS04525 808f5385c493b3a72e829ca477622cce 1026 PANTHER PTHR32063 1 1026 0.0 T 21-04-2016 VFU_RS04525 808f5385c493b3a72e829ca477622cce 1026 Gene3D G3DSA:1.20.1640.10 284 499 3.0E-50 T 21-04-2016 VFU_RS04525 808f5385c493b3a72e829ca477622cce 1026 Pfam PF00873 AcrB/AcrD/AcrF family 6 1021 2.7E-169 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS04525 808f5385c493b3a72e829ca477622cce 1026 SUPERFAMILY SSF82714 706 787 5.89E-6 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VFU_RS04525 808f5385c493b3a72e829ca477622cce 1026 SUPERFAMILY SSF82866 788 1023 1.24E-48 T 21-04-2016 VFU_RS04525 808f5385c493b3a72e829ca477622cce 1026 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 1.7E-28 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS04525 808f5385c493b3a72e829ca477622cce 1026 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 1.7E-28 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS04525 808f5385c493b3a72e829ca477622cce 1026 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.7E-28 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS04525 808f5385c493b3a72e829ca477622cce 1026 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 1.7E-28 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS04525 808f5385c493b3a72e829ca477622cce 1026 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.7E-28 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS04525 808f5385c493b3a72e829ca477622cce 1026 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.7E-28 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS04525 808f5385c493b3a72e829ca477622cce 1026 Gene3D G3DSA:3.30.2090.10 707 787 2.0E-5 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VFU_RS04525 808f5385c493b3a72e829ca477622cce 1026 PANTHER PTHR32063:SF31 1 1026 0.0 T 21-04-2016 VFU_RS04525 808f5385c493b3a72e829ca477622cce 1026 SUPERFAMILY SSF82693 41 133 2.3E-22 T 21-04-2016 VFU_RS04525 808f5385c493b3a72e829ca477622cce 1026 Gene3D G3DSA:1.10.3850.10 795 1022 4.8E-57 T 21-04-2016 VFU_RS12635 3ddeab61624ee4aff79b35f0acbeb026 496 SUPERFAMILY SSF55604 410 484 2.35E-20 T 21-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VFU_RS12635 3ddeab61624ee4aff79b35f0acbeb026 496 Pfam PF00367 phosphotransferase system, EIIB 413 446 1.8E-12 T 21-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VFU_RS12635 3ddeab61624ee4aff79b35f0acbeb026 496 Pfam PF02378 Phosphotransferase system, EIIC 11 324 1.3E-80 T 21-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VFU_RS12635 3ddeab61624ee4aff79b35f0acbeb026 496 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 482 1.1E-225 T 21-04-2016 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 VFU_RS12635 3ddeab61624ee4aff79b35f0acbeb026 496 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 424 441 - T 21-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VFU_RS12635 3ddeab61624ee4aff79b35f0acbeb026 496 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 384 471 1.7E-22 T 21-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VFU_RS12635 3ddeab61624ee4aff79b35f0acbeb026 496 PANTHER PTHR30009:SF4 4 496 7.2E-232 T 21-04-2016 VFU_RS12635 3ddeab61624ee4aff79b35f0acbeb026 496 Gene3D G3DSA:3.30.1360.60 408 484 7.2E-26 T 21-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VFU_RS12635 3ddeab61624ee4aff79b35f0acbeb026 496 PANTHER PTHR30009 4 496 7.2E-232 T 21-04-2016 VFU_RS03590 f1d028ed05d18662a843debbef2ae4f0 452 Pfam PF01769 Divalent cation transporter 323 445 2.7E-22 T 21-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 VFU_RS03590 f1d028ed05d18662a843debbef2ae4f0 452 PANTHER PTHR11911:SF99 1 422 8.1E-112 T 21-04-2016 VFU_RS03590 f1d028ed05d18662a843debbef2ae4f0 452 Pfam PF00571 CBS domain 213 257 1.7E-4 T 21-04-2016 IPR000644 CBS domain VFU_RS03590 f1d028ed05d18662a843debbef2ae4f0 452 Pfam PF00571 CBS domain 140 196 4.1E-5 T 21-04-2016 IPR000644 CBS domain VFU_RS03590 f1d028ed05d18662a843debbef2ae4f0 452 Pfam PF03448 MgtE intracellular N domain 36 137 2.4E-25 T 21-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain VFU_RS03590 f1d028ed05d18662a843debbef2ae4f0 452 SMART SM00924 36 139 5.5E-34 T 21-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain VFU_RS03590 f1d028ed05d18662a843debbef2ae4f0 452 TIGRFAM TIGR00400 mgtE: magnesium transporter 17 451 4.7E-87 T 21-04-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 VFU_RS03590 f1d028ed05d18662a843debbef2ae4f0 452 Gene3D G3DSA:3.10.580.10 132 262 2.5E-18 T 21-04-2016 VFU_RS03590 f1d028ed05d18662a843debbef2ae4f0 452 Gene3D G3DSA:1.25.60.10 9 131 4.4E-28 T 21-04-2016 VFU_RS03590 f1d028ed05d18662a843debbef2ae4f0 452 SUPERFAMILY SSF54631 138 278 5.56E-29 T 21-04-2016 VFU_RS03590 f1d028ed05d18662a843debbef2ae4f0 452 SUPERFAMILY SSF161093 280 451 3.66E-44 T 21-04-2016 VFU_RS03590 f1d028ed05d18662a843debbef2ae4f0 452 PANTHER PTHR11911 1 422 8.1E-112 T 21-04-2016 VFU_RS03590 f1d028ed05d18662a843debbef2ae4f0 452 SUPERFAMILY SSF158791 11 136 5.1E-30 T 21-04-2016 VFU_RS03590 f1d028ed05d18662a843debbef2ae4f0 452 Gene3D G3DSA:1.10.357.20 280 451 3.0E-48 T 21-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 VFU_RS06945 56faa208495055f2cb87d3b07a7edd4e 376 PANTHER PTHR30531:SF4 1 362 9.5E-126 T 21-04-2016 VFU_RS06945 56faa208495055f2cb87d3b07a7edd4e 376 SUPERFAMILY SSF160544 245 352 5.23E-35 T 21-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal VFU_RS06945 56faa208495055f2cb87d3b07a7edd4e 376 Gene3D G3DSA:3.40.1690.10 219 357 5.7E-57 T 21-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal VFU_RS06945 56faa208495055f2cb87d3b07a7edd4e 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 273 288 2.4E-36 T 21-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VFU_RS06945 56faa208495055f2cb87d3b07a7edd4e 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 11 33 2.4E-36 T 21-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VFU_RS06945 56faa208495055f2cb87d3b07a7edd4e 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 229 246 2.4E-36 T 21-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VFU_RS06945 56faa208495055f2cb87d3b07a7edd4e 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 209 227 2.4E-36 T 21-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VFU_RS06945 56faa208495055f2cb87d3b07a7edd4e 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 303 324 2.4E-36 T 21-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VFU_RS06945 56faa208495055f2cb87d3b07a7edd4e 376 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 8 353 4.2E-117 T 21-04-2016 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 VFU_RS06945 56faa208495055f2cb87d3b07a7edd4e 376 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 348 5.9E-119 T 21-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VFU_RS06945 56faa208495055f2cb87d3b07a7edd4e 376 PANTHER PTHR30531 1 362 9.5E-126 T 21-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VFU_RS12545 132288370faf6219525a632ce239e714 824 Hamap MF_00461 Electron transport complex subunit RsxC [rsxC]. 1 778 245.17 T 21-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 VFU_RS12545 132288370faf6219525a632ce239e714 824 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 140 283 2.6E-45 T 21-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain VFU_RS12545 132288370faf6219525a632ce239e714 824 PANTHER PTHR11780 1 483 7.0E-245 T 21-04-2016 VFU_RS12545 132288370faf6219525a632ce239e714 824 Pfam PF10531 SLBB domain 296 345 1.2E-8 T 21-04-2016 IPR019554 Soluble ligand binding domain VFU_RS12545 132288370faf6219525a632ce239e714 824 SUPERFAMILY SSF46548 337 445 5.76E-20 T 21-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 VFU_RS12545 132288370faf6219525a632ce239e714 824 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 417 428 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VFU_RS12545 132288370faf6219525a632ce239e714 824 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 378 389 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VFU_RS12545 132288370faf6219525a632ce239e714 824 Pfam PF13237 4Fe-4S dicluster domain 377 428 1.8E-8 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VFU_RS12545 132288370faf6219525a632ce239e714 824 PANTHER PTHR11780:SF1 1 483 7.0E-245 T 21-04-2016 VFU_RS12545 132288370faf6219525a632ce239e714 824 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 448 5.2E-190 T 21-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 VFU_RS12545 132288370faf6219525a632ce239e714 824 SUPERFAMILY SSF142019 95 302 1.07E-58 T 21-04-2016 VFU_RS12545 132288370faf6219525a632ce239e714 824 Gene3D G3DSA:1.10.1060.10 363 448 5.3E-19 T 21-04-2016 VFU_RS12545 132288370faf6219525a632ce239e714 824 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 116 8.7E-35 T 21-04-2016 IPR026902 RnfC Barrel sandwich hybrid domain VFU_RS10730 b9aa88c0ece798fe5a7efc1a303b1aac 133 Gene3D G3DSA:3.30.2130.10 1 130 8.4E-51 T 21-04-2016 VFU_RS10730 b9aa88c0ece798fe5a7efc1a303b1aac 133 PANTHER PTHR39199:SF1 1 133 3.0E-48 T 21-04-2016 VFU_RS10730 b9aa88c0ece798fe5a7efc1a303b1aac 133 Pfam PF10000 ACT domain 2 70 4.5E-23 T 21-04-2016 IPR018717 Domain of unknown function DUF2241 VFU_RS10730 b9aa88c0ece798fe5a7efc1a303b1aac 133 PANTHER PTHR39199 1 133 3.0E-48 T 21-04-2016 VFU_RS10730 b9aa88c0ece798fe5a7efc1a303b1aac 133 Pfam PF13840 ACT domain 72 127 8.9E-13 T 21-04-2016 IPR027795 GATS-like ACT domain VFU_RS10730 b9aa88c0ece798fe5a7efc1a303b1aac 133 SUPERFAMILY SSF55021 70 130 5.6E-20 T 21-04-2016 VFU_RS10730 b9aa88c0ece798fe5a7efc1a303b1aac 133 SUPERFAMILY SSF55021 3 66 1.65E-15 T 21-04-2016 VFU_RS14525 fb72264f05743d1bb004054ee97d3c72 158 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 35.961 T 21-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 VFU_RS14525 fb72264f05743d1bb004054ee97d3c72 158 SUPERFAMILY SSF69765 1 157 2.88E-65 T 21-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 VFU_RS14525 fb72264f05743d1bb004054ee97d3c72 158 PANTHER PTHR32125 1 158 9.8E-58 T 21-04-2016 VFU_RS14525 fb72264f05743d1bb004054ee97d3c72 158 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 157 9.9E-69 T 21-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 VFU_RS14525 fb72264f05743d1bb004054ee97d3c72 158 Gene3D G3DSA:3.30.1330.50 1 157 8.2E-72 T 21-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 VFU_RS14525 fb72264f05743d1bb004054ee97d3c72 158 Pfam PF02542 YgbB family 2 155 4.0E-65 T 21-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 VFU_RS14525 fb72264f05743d1bb004054ee97d3c72 158 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 21-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 VFU_RS01280 b6df6c3af9da4617802f0bb13aba095e 518 PANTHER PTHR30290 26 514 1.2E-179 T 21-04-2016 VFU_RS01280 b6df6c3af9da4617802f0bb13aba095e 518 SUPERFAMILY SSF53850 26 516 1.39E-127 T 21-04-2016 VFU_RS01280 b6df6c3af9da4617802f0bb13aba095e 518 PIRSF PIRSF002741 18 503 4.6E-93 T 21-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VFU_RS01280 b6df6c3af9da4617802f0bb13aba095e 518 Gene3D G3DSA:3.10.105.10 292 487 5.7E-54 T 21-04-2016 VFU_RS01280 b6df6c3af9da4617802f0bb13aba095e 518 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 67 425 1.8E-83 T 21-04-2016 IPR000914 Solute-binding protein family 5 domain VFU_RS01280 b6df6c3af9da4617802f0bb13aba095e 518 PANTHER PTHR30290:SF24 26 514 1.2E-179 T 21-04-2016 VFU_RS01280 b6df6c3af9da4617802f0bb13aba095e 518 Gene3D G3DSA:3.90.76.10 33 189 2.6E-33 T 21-04-2016 VFU_RS01280 b6df6c3af9da4617802f0bb13aba095e 518 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 72 93 - T 21-04-2016 IPR023765 Solute-binding protein family 5, conserved site VFU_RS01280 b6df6c3af9da4617802f0bb13aba095e 518 Gene3D G3DSA:3.40.190.10 190 291 1.9E-32 T 21-04-2016 VFU_RS12215 09d40aa314d73f24bc74280e103c8589 300 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 5 230 1.2E-49 T 21-04-2016 IPR009228 Capsid scaffolding protein GpO GO:0019069 VFU_RS11015 89fb7bb314c3421e1695e6b01dee6279 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 136 2.1E-45 T 21-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G VFU_RS11015 89fb7bb314c3421e1695e6b01dee6279 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 149 243 2.7E-30 T 21-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G VFU_RS11015 89fb7bb314c3421e1695e6b01dee6279 261 PANTHER PTHR30435:SF19 1 259 1.3E-117 T 21-04-2016 VFU_RS11015 89fb7bb314c3421e1695e6b01dee6279 261 PANTHER PTHR30435 1 259 1.3E-117 T 21-04-2016 VFU_RS11015 89fb7bb314c3421e1695e6b01dee6279 261 Pfam PF00460 Flagella basal body rod protein 7 35 1.7E-9 T 21-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VFU_RS11015 89fb7bb314c3421e1695e6b01dee6279 261 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 21-04-2016 IPR019776 Flagellar basal body rod protein, conserved site VFU_RS11015 89fb7bb314c3421e1695e6b01dee6279 261 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 1.9E-108 T 21-04-2016 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 VFU_RS11015 89fb7bb314c3421e1695e6b01dee6279 261 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 183 259 5.4E-24 T 21-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VFU_RS11015 89fb7bb314c3421e1695e6b01dee6279 261 SUPERFAMILY SSF117143 93 222 5.75E-35 T 21-04-2016 VFU_RS03910 c1a0bd5a56ada966748b3a2b8ea57fc2 421 SMART SM00471 168 304 6.9E-7 T 21-04-2016 IPR003607 HD/PDEase domain VFU_RS03910 c1a0bd5a56ada966748b3a2b8ea57fc2 421 Pfam PF11871 Domain of unknown function (DUF3391) 4 141 9.6E-30 T 21-04-2016 IPR021812 Protein of unknown function DUF3391 VFU_RS03910 c1a0bd5a56ada966748b3a2b8ea57fc2 421 Gene3D G3DSA:1.10.3210.10 170 332 1.2E-18 T 21-04-2016 IPR006674 HD domain VFU_RS03910 c1a0bd5a56ada966748b3a2b8ea57fc2 421 SUPERFAMILY SSF109604 168 333 6.68E-25 T 21-04-2016 VFU_RS03910 c1a0bd5a56ada966748b3a2b8ea57fc2 421 TIGRFAM TIGR00277 HDIG: HDIG domain 170 263 1.3E-7 T 21-04-2016 IPR006675 HDIG domain VFU_RS03910 c1a0bd5a56ada966748b3a2b8ea57fc2 421 Pfam PF01966 HD domain 174 294 5.4E-15 T 21-04-2016 IPR006674 HD domain VFU_RS02535 462b3dcf2f07d81ac36f0112bedceec9 304 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 13 270 3.1E-80 T 21-04-2016 IPR017039 Virulence factor BrkB VFU_RS02535 462b3dcf2f07d81ac36f0112bedceec9 304 Pfam PF03631 Virulence factor BrkB 24 271 6.5E-57 T 21-04-2016 IPR017039 Virulence factor BrkB VFU_RS02535 462b3dcf2f07d81ac36f0112bedceec9 304 PIRSF PIRSF035875 2 292 2.4E-53 T 21-04-2016 IPR017039 Virulence factor BrkB VFU_RS02535 462b3dcf2f07d81ac36f0112bedceec9 304 PANTHER PTHR30213 13 279 2.8E-104 T 21-04-2016 VFU_RS02535 462b3dcf2f07d81ac36f0112bedceec9 304 PANTHER PTHR30213:SF0 13 279 2.8E-104 T 21-04-2016 VFU_RS02535 462b3dcf2f07d81ac36f0112bedceec9 304 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 12 287 23.572 T 21-04-2016 IPR023679 Uncharacterised protein family UPF0761, bacterial VFU_RS00695 e95dc5f52820ebdda5e1e56507ff58eb 720 Pfam PF13807 G-rich domain on putative tyrosine kinase 369 449 1.4E-34 T 21-04-2016 IPR032807 Tyrosine kinase, G-rich domain VFU_RS00695 e95dc5f52820ebdda5e1e56507ff58eb 720 SUPERFAMILY SSF52540 527 704 6.06E-36 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS00695 e95dc5f52820ebdda5e1e56507ff58eb 720 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 509 712 6.9E-51 T 21-04-2016 IPR005702 Exopolysaccharide synthesis protein GO:0045226 VFU_RS00695 e95dc5f52820ebdda5e1e56507ff58eb 720 PANTHER PTHR32309:SF17 187 720 1.5E-226 T 21-04-2016 VFU_RS00695 e95dc5f52820ebdda5e1e56507ff58eb 720 PANTHER PTHR32309:SF17 14 124 1.5E-226 T 21-04-2016 VFU_RS00695 e95dc5f52820ebdda5e1e56507ff58eb 720 Gene3D G3DSA:3.40.50.300 523 704 3.6E-33 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS00695 e95dc5f52820ebdda5e1e56507ff58eb 720 Pfam PF02706 Chain length determinant protein 15 254 3.4E-39 T 21-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 VFU_RS00695 e95dc5f52820ebdda5e1e56507ff58eb 720 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 531 700 5.4E-11 T 21-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain VFU_RS00695 e95dc5f52820ebdda5e1e56507ff58eb 720 PANTHER PTHR32309 187 720 1.5E-226 T 21-04-2016 VFU_RS00695 e95dc5f52820ebdda5e1e56507ff58eb 720 PANTHER PTHR32309 14 124 1.5E-226 T 21-04-2016 VFU_RS11335 b6ea3a16fa1dafddcc37bce5afc1bf59 262 SUPERFAMILY SSF46785 5 68 1.43E-11 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS11335 b6ea3a16fa1dafddcc37bce5afc1bf59 262 Pfam PF00455 DeoR C terminal sensor domain 75 232 3.7E-51 T 21-04-2016 IPR014036 DeoR C-terminal sensor domain VFU_RS11335 b6ea3a16fa1dafddcc37bce5afc1bf59 262 PANTHER PTHR30363 1 253 6.2E-79 T 21-04-2016 VFU_RS11335 b6ea3a16fa1dafddcc37bce5afc1bf59 262 SMART SM00420 6 58 2.3E-9 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VFU_RS11335 b6ea3a16fa1dafddcc37bce5afc1bf59 262 SMART SM01134 73 233 4.4E-67 T 21-04-2016 VFU_RS11335 b6ea3a16fa1dafddcc37bce5afc1bf59 262 PANTHER PTHR30363:SF11 1 253 6.2E-79 T 21-04-2016 VFU_RS11335 b6ea3a16fa1dafddcc37bce5afc1bf59 262 Gene3D G3DSA:1.10.10.10 5 52 6.0E-7 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS11335 b6ea3a16fa1dafddcc37bce5afc1bf59 262 Gene3D G3DSA:3.40.50.1360 77 215 2.1E-14 T 21-04-2016 VFU_RS11335 b6ea3a16fa1dafddcc37bce5afc1bf59 262 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 6.5E-13 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VFU_RS11335 b6ea3a16fa1dafddcc37bce5afc1bf59 262 SUPERFAMILY SSF100950 74 234 8.29E-33 T 21-04-2016 VFU_RS01840 97be344b142be0d98cec53158f68c35c 723 SUPERFAMILY SSF51735 315 496 3.74E-54 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS01840 97be344b142be0d98cec53158f68c35c 723 Gene3D G3DSA:1.10.1040.10 633 719 1.8E-19 T 21-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VFU_RS01840 97be344b142be0d98cec53158f68c35c 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 593 5.4E-26 T 21-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VFU_RS01840 97be344b142be0d98cec53158f68c35c 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 628 702 8.7E-5 T 21-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VFU_RS01840 97be344b142be0d98cec53158f68c35c 723 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 716 52.384 T 21-04-2016 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VFU_RS01840 97be344b142be0d98cec53158f68c35c 723 PANTHER PTHR23309:SF18 8 719 0.0 T 21-04-2016 VFU_RS01840 97be344b142be0d98cec53158f68c35c 723 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 715 0.0 T 21-04-2016 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VFU_RS01840 97be344b142be0d98cec53158f68c35c 723 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 317 495 1.3E-58 T 21-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VFU_RS01840 97be344b142be0d98cec53158f68c35c 723 PANTHER PTHR23309 8 719 0.0 T 21-04-2016 VFU_RS01840 97be344b142be0d98cec53158f68c35c 723 Gene3D G3DSA:3.90.226.10 4 201 2.0E-58 T 21-04-2016 IPR029045 ClpP/crotonase-like domain VFU_RS01840 97be344b142be0d98cec53158f68c35c 723 Gene3D G3DSA:3.90.226.10 235 296 2.0E-58 T 21-04-2016 IPR029045 ClpP/crotonase-like domain VFU_RS01840 97be344b142be0d98cec53158f68c35c 723 SUPERFAMILY SSF52096 2 305 1.08E-66 T 21-04-2016 IPR029045 ClpP/crotonase-like domain VFU_RS01840 97be344b142be0d98cec53158f68c35c 723 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 207 1.6E-39 T 21-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 VFU_RS01840 97be344b142be0d98cec53158f68c35c 723 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 518 - T 21-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VFU_RS01840 97be344b142be0d98cec53158f68c35c 723 Gene3D G3DSA:3.40.50.720 311 498 5.4E-58 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS01840 97be344b142be0d98cec53158f68c35c 723 SUPERFAMILY SSF48179 626 715 2.13E-24 T 21-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VFU_RS01840 97be344b142be0d98cec53158f68c35c 723 Gene3D G3DSA:1.10.1040.10 499 593 7.6E-22 T 21-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VFU_RS01840 97be344b142be0d98cec53158f68c35c 723 SUPERFAMILY SSF48179 496 602 3.32E-28 T 21-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VFU_RS03015 3dc3e768d1f20e6fb5a5426889483fcd 246 PANTHER PTHR11921 3 229 4.8E-102 T 21-04-2016 VFU_RS03015 3dc3e768d1f20e6fb5a5426889483fcd 246 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VFU_RS03015 3dc3e768d1f20e6fb5a5426889483fcd 246 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 111 4.9E-34 T 21-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 VFU_RS03015 3dc3e768d1f20e6fb5a5426889483fcd 246 Gene3D G3DSA:1.10.1060.10 107 230 4.9E-35 T 21-04-2016 VFU_RS03015 3dc3e768d1f20e6fb5a5426889483fcd 246 SUPERFAMILY SSF46548 107 226 1.74E-30 T 21-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 VFU_RS03015 3dc3e768d1f20e6fb5a5426889483fcd 246 SUPERFAMILY SSF54292 5 106 2.42E-29 T 21-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VFU_RS03015 3dc3e768d1f20e6fb5a5426889483fcd 246 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 3.0E-94 T 21-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 VFU_RS03015 3dc3e768d1f20e6fb5a5426889483fcd 246 Gene3D G3DSA:3.10.20.30 3 106 1.9E-34 T 21-04-2016 IPR012675 Beta-grasp domain VFU_RS03015 3dc3e768d1f20e6fb5a5426889483fcd 246 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 21-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VFU_RS03015 3dc3e768d1f20e6fb5a5426889483fcd 246 Pfam PF13183 4Fe-4S dicluster domain 147 219 7.4E-11 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VFU_RS06525 f8945ecd5128b76daa28357be7018234 267 ProSitePatterns PS00770 Aminotransferases class-IV signature. 173 202 - T 21-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 VFU_RS06525 f8945ecd5128b76daa28357be7018234 267 SUPERFAMILY SSF56752 1 260 2.35E-69 T 21-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 VFU_RS06525 f8945ecd5128b76daa28357be7018234 267 Gene3D G3DSA:3.20.10.10 124 261 4.2E-43 T 21-04-2016 VFU_RS06525 f8945ecd5128b76daa28357be7018234 267 Pfam PF01063 Amino-transferase class IV 24 246 2.2E-46 T 21-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 VFU_RS06525 f8945ecd5128b76daa28357be7018234 267 PANTHER PTHR11825:SF55 1 247 1.3E-74 T 21-04-2016 VFU_RS06525 f8945ecd5128b76daa28357be7018234 267 Gene3D G3DSA:3.30.470.10 1 106 1.0E-32 T 21-04-2016 VFU_RS06525 f8945ecd5128b76daa28357be7018234 267 PANTHER PTHR11825 1 247 1.3E-74 T 21-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 VFU_RS06525 f8945ecd5128b76daa28357be7018234 267 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 263 1.4E-101 T 21-04-2016 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543|UniPathway: UPA00077 VFU_RS08035 d1c93803adcc722a623b5f45392392c4 591 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 7.1E-15 T 21-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VFU_RS08035 d1c93803adcc722a623b5f45392392c4 591 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 583 5.0E-264 T 21-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 VFU_RS08035 d1c93803adcc722a623b5f45392392c4 591 Pfam PF02938 GAD domain 307 406 3.2E-32 T 21-04-2016 IPR029351 GAD domain VFU_RS08035 d1c93803adcc722a623b5f45392392c4 591 Gene3D G3DSA:3.30.1360.30 276 413 7.5E-50 T 21-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 VFU_RS08035 d1c93803adcc722a623b5f45392392c4 591 Gene3D G3DSA:3.30.930.10 414 584 3.0E-109 T 21-04-2016 VFU_RS08035 d1c93803adcc722a623b5f45392392c4 591 Gene3D G3DSA:3.30.930.10 131 275 3.0E-109 T 21-04-2016 VFU_RS08035 d1c93803adcc722a623b5f45392392c4 591 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 558 1.1E-105 T 21-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VFU_RS08035 d1c93803adcc722a623b5f45392392c4 591 SUPERFAMILY SSF50249 1 105 1.73E-33 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS08035 d1c93803adcc722a623b5f45392392c4 591 SUPERFAMILY SSF55261 288 419 7.36E-47 T 21-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 VFU_RS08035 d1c93803adcc722a623b5f45392392c4 591 SUPERFAMILY SSF55681 420 583 2.87E-103 T 21-04-2016 VFU_RS08035 d1c93803adcc722a623b5f45392392c4 591 SUPERFAMILY SSF55681 108 287 2.87E-103 T 21-04-2016 VFU_RS08035 d1c93803adcc722a623b5f45392392c4 591 PANTHER PTHR22594 370 571 3.7E-252 T 21-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VFU_RS08035 d1c93803adcc722a623b5f45392392c4 591 PANTHER PTHR22594 1 296 3.7E-252 T 21-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VFU_RS08035 d1c93803adcc722a623b5f45392392c4 591 PANTHER PTHR22594:SF5 370 571 3.7E-252 T 21-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 VFU_RS08035 d1c93803adcc722a623b5f45392392c4 591 PANTHER PTHR22594:SF5 1 296 3.7E-252 T 21-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 VFU_RS08035 d1c93803adcc722a623b5f45392392c4 591 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 1 563 36.568 T 21-04-2016 VFU_RS08035 d1c93803adcc722a623b5f45392392c4 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 2.7E-26 T 21-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VFU_RS08035 d1c93803adcc722a623b5f45392392c4 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 2.7E-26 T 21-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VFU_RS08035 d1c93803adcc722a623b5f45392392c4 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 2.7E-26 T 21-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VFU_RS08035 d1c93803adcc722a623b5f45392392c4 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 2.7E-26 T 21-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VFU_RS08035 d1c93803adcc722a623b5f45392392c4 591 Gene3D G3DSA:2.40.50.140 1 106 5.3E-39 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS03060 3db53f46e98baad019923b5d217a0262 378 Pfam PF07687 Peptidase dimerisation domain 174 285 7.5E-26 T 21-04-2016 IPR011650 Peptidase M20, dimerisation domain VFU_RS03060 3db53f46e98baad019923b5d217a0262 378 Gene3D G3DSA:3.30.70.360 186 287 3.6E-26 T 21-04-2016 IPR011650 Peptidase M20, dimerisation domain VFU_RS03060 3db53f46e98baad019923b5d217a0262 378 Pfam PF01546 Peptidase family M20/M25/M40 72 373 3.3E-32 T 21-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 VFU_RS03060 3db53f46e98baad019923b5d217a0262 378 SUPERFAMILY SSF53187 301 377 1.17E-55 T 21-04-2016 VFU_RS03060 3db53f46e98baad019923b5d217a0262 378 SUPERFAMILY SSF53187 3 176 1.17E-55 T 21-04-2016 VFU_RS03060 3db53f46e98baad019923b5d217a0262 378 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 71 80 - T 21-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VFU_RS03060 3db53f46e98baad019923b5d217a0262 378 Hamap MF_01108 Acetylornithine deacetylase [argE]. 1 378 62.959 T 21-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 VFU_RS03060 3db53f46e98baad019923b5d217a0262 378 Gene3D G3DSA:3.40.630.10 319 377 1.6E-60 T 21-04-2016 VFU_RS03060 3db53f46e98baad019923b5d217a0262 378 Gene3D G3DSA:3.40.630.10 4 185 1.6E-60 T 21-04-2016 VFU_RS03060 3db53f46e98baad019923b5d217a0262 378 SUPERFAMILY SSF55031 177 292 6.73E-23 T 21-04-2016 IPR011650 Peptidase M20, dimerisation domain VFU_RS03060 3db53f46e98baad019923b5d217a0262 378 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 106 143 - T 21-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VFU_RS03060 3db53f46e98baad019923b5d217a0262 378 PANTHER PTHR11014 6 377 5.9E-205 T 21-04-2016 VFU_RS03060 3db53f46e98baad019923b5d217a0262 378 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 8 372 1.0E-125 T 21-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 VFU_RS03060 3db53f46e98baad019923b5d217a0262 378 PANTHER PTHR11014:SF75 6 377 5.9E-205 T 21-04-2016 VFU_RS08785 6ba7718dfca753e1d0d990e725d839f2 313 PANTHER PTHR30537 1 311 2.2E-141 T 21-04-2016 VFU_RS08785 6ba7718dfca753e1d0d990e725d839f2 313 PANTHER PTHR30537:SF21 1 311 2.2E-141 T 21-04-2016 VFU_RS08785 6ba7718dfca753e1d0d990e725d839f2 313 Gene3D G3DSA:3.40.190.10 179 262 1.0E-16 T 21-04-2016 VFU_RS08785 6ba7718dfca753e1d0d990e725d839f2 313 SUPERFAMILY SSF53850 89 298 1.09E-39 T 21-04-2016 VFU_RS08785 6ba7718dfca753e1d0d990e725d839f2 313 Gene3D G3DSA:3.40.190.10 92 178 5.1E-21 T 21-04-2016 VFU_RS08785 6ba7718dfca753e1d0d990e725d839f2 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 6.9E-6 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS08785 6ba7718dfca753e1d0d990e725d839f2 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 6.9E-6 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS08785 6ba7718dfca753e1d0d990e725d839f2 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 6.9E-6 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS08785 6ba7718dfca753e1d0d990e725d839f2 313 SUPERFAMILY SSF46785 4 112 2.6E-20 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS08785 6ba7718dfca753e1d0d990e725d839f2 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.8E-19 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS08785 6ba7718dfca753e1d0d990e725d839f2 313 Gene3D G3DSA:1.10.10.10 4 83 2.9E-24 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS08785 6ba7718dfca753e1d0d990e725d839f2 313 Pfam PF03466 LysR substrate binding domain 88 294 4.2E-36 T 21-04-2016 IPR005119 LysR, substrate-binding VFU_RS07635 bafec7067ff3d7ebe598667d6f948151 183 Pfam PF13633 Prokaryotic N-terminal methylation site 6 28 1.5E-7 T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site VFU_RS07635 bafec7067ff3d7ebe598667d6f948151 183 SUPERFAMILY SSF54523 7 129 6.98E-17 T 21-04-2016 VFU_RS07635 bafec7067ff3d7ebe598667d6f948151 183 Gene3D G3DSA:3.30.700.10 7 57 2.7E-8 T 21-04-2016 VFU_RS07635 bafec7067ff3d7ebe598667d6f948151 183 PANTHER PTHR30093 1 117 3.4E-27 T 21-04-2016 VFU_RS07635 bafec7067ff3d7ebe598667d6f948151 183 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 26 2.3E-7 T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site VFU_RS07635 bafec7067ff3d7ebe598667d6f948151 183 PANTHER PTHR30093:SF10 1 117 3.4E-27 T 21-04-2016 VFU_RS15210 c707a69f598e3d3a5c6df1fa476ec9b5 664 Gene3D G3DSA:3.20.20.450 405 636 7.2E-35 T 21-04-2016 IPR001633 EAL domain VFU_RS15210 c707a69f598e3d3a5c6df1fa476ec9b5 664 PANTHER PTHR33121:SF16 396 635 2.3E-27 T 21-04-2016 VFU_RS15210 c707a69f598e3d3a5c6df1fa476ec9b5 664 SUPERFAMILY SSF55073 233 385 1.1E-14 T 21-04-2016 IPR029787 Nucleotide cyclase VFU_RS15210 c707a69f598e3d3a5c6df1fa476ec9b5 664 Pfam PF00563 EAL domain 430 636 3.9E-41 T 21-04-2016 IPR001633 EAL domain VFU_RS15210 c707a69f598e3d3a5c6df1fa476ec9b5 664 SMART SM00267 216 386 6.0E-7 T 21-04-2016 IPR000160 GGDEF domain VFU_RS15210 c707a69f598e3d3a5c6df1fa476ec9b5 664 PANTHER PTHR33121 396 635 2.3E-27 T 21-04-2016 VFU_RS15210 c707a69f598e3d3a5c6df1fa476ec9b5 664 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 40 134 1.7E-30 T 21-04-2016 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 VFU_RS15210 c707a69f598e3d3a5c6df1fa476ec9b5 664 SUPERFAMILY SSF141868 428 636 1.57E-37 T 21-04-2016 IPR001633 EAL domain VFU_RS15210 c707a69f598e3d3a5c6df1fa476ec9b5 664 Gene3D G3DSA:3.30.70.270 230 388 9.3E-17 T 21-04-2016 VFU_RS15210 c707a69f598e3d3a5c6df1fa476ec9b5 664 SMART SM00052 397 648 2.5E-16 T 21-04-2016 IPR001633 EAL domain VFU_RS15210 c707a69f598e3d3a5c6df1fa476ec9b5 664 Pfam PF00990 Diguanylate cyclase, GGDEF domain 229 381 4.7E-16 T 21-04-2016 IPR000160 GGDEF domain VFU_RS13715 bdacd5965eabca687e88e181caab2b58 296 Gene3D G3DSA:3.40.50.720 1 173 1.2E-40 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS13715 bdacd5965eabca687e88e181caab2b58 296 PANTHER PTHR21708 1 295 4.9E-75 T 21-04-2016 VFU_RS13715 bdacd5965eabca687e88e181caab2b58 296 SUPERFAMILY SSF48179 168 290 9.18E-37 T 21-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VFU_RS13715 bdacd5965eabca687e88e181caab2b58 296 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 142 6.4E-30 T 21-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 VFU_RS13715 bdacd5965eabca687e88e181caab2b58 296 SUPERFAMILY SSF51735 1 166 2.03E-48 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS13715 bdacd5965eabca687e88e181caab2b58 296 PANTHER PTHR21708:SF24 1 295 4.9E-75 T 21-04-2016 VFU_RS13715 bdacd5965eabca687e88e181caab2b58 296 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 168 289 1.4E-38 T 21-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 VFU_RS13715 bdacd5965eabca687e88e181caab2b58 296 Gene3D G3DSA:1.10.1040.10 174 291 6.4E-46 T 21-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VFU_RS13715 bdacd5965eabca687e88e181caab2b58 296 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 292 2.8E-85 T 21-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 VFU_RS04610 575ac661ac94f8998e6730b50f15a5f6 151 SUPERFAMILY SSF74942 84 151 1.57E-16 T 21-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal VFU_RS04610 575ac661ac94f8998e6730b50f15a5f6 151 Pfam PF02576 Putative ribosome maturation factor RimP 14 147 1.9E-48 T 21-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 VFU_RS04610 575ac661ac94f8998e6730b50f15a5f6 151 PANTHER PTHR33867 1 151 1.6E-56 T 21-04-2016 VFU_RS04610 575ac661ac94f8998e6730b50f15a5f6 151 Gene3D G3DSA:2.30.30.180 88 148 1.6E-11 T 21-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal VFU_RS04610 575ac661ac94f8998e6730b50f15a5f6 151 SUPERFAMILY SSF75420 3 83 1.14E-25 T 21-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal VFU_RS04610 575ac661ac94f8998e6730b50f15a5f6 151 Gene3D G3DSA:3.30.300.70 2 80 1.4E-32 T 21-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal VFU_RS04610 575ac661ac94f8998e6730b50f15a5f6 151 PANTHER PTHR33867:SF1 1 151 1.6E-56 T 21-04-2016 VFU_RS04610 575ac661ac94f8998e6730b50f15a5f6 151 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 23.845 T 21-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 VFU_RS07265 e2826808a619232941388b0c20c480fc 261 PANTHER PTHR24322:SF513 157 188 3.8E-41 T 21-04-2016 VFU_RS07265 e2826808a619232941388b0c20c480fc 261 PANTHER PTHR24322:SF513 12 141 3.8E-41 T 21-04-2016 VFU_RS07265 e2826808a619232941388b0c20c480fc 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 21-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VFU_RS07265 e2826808a619232941388b0c20c480fc 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 258 3.6E-53 T 21-04-2016 VFU_RS07265 e2826808a619232941388b0c20c480fc 261 TIGRFAM TIGR04316 dhbA_paeA: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 10 260 1.6E-113 T 21-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VFU_RS07265 e2826808a619232941388b0c20c480fc 261 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 179 0.0075 T 21-04-2016 VFU_RS07265 e2826808a619232941388b0c20c480fc 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 14 31 4.5E-57 T 21-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VFU_RS07265 e2826808a619232941388b0c20c480fc 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 107 127 4.5E-57 T 21-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VFU_RS07265 e2826808a619232941388b0c20c480fc 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 87 104 4.5E-57 T 21-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VFU_RS07265 e2826808a619232941388b0c20c480fc 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 211 230 4.5E-57 T 21-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VFU_RS07265 e2826808a619232941388b0c20c480fc 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 172 195 4.5E-57 T 21-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VFU_RS07265 e2826808a619232941388b0c20c480fc 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 237 256 4.5E-57 T 21-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VFU_RS07265 e2826808a619232941388b0c20c480fc 261 Gene3D G3DSA:3.40.50.720 2 259 4.9E-72 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS07265 e2826808a619232941388b0c20c480fc 261 PANTHER PTHR24322 157 188 3.8E-41 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS07265 e2826808a619232941388b0c20c480fc 261 PANTHER PTHR24322 12 141 3.8E-41 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS07265 e2826808a619232941388b0c20c480fc 261 SUPERFAMILY SSF51735 7 259 3.55E-68 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS02710 df6f1cf37dcdb32367c82c39fa41f435 463 TIGRFAM TIGR03173 pbuX: xanthine permease 28 447 2.3E-130 T 21-04-2016 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 VFU_RS02710 df6f1cf37dcdb32367c82c39fa41f435 463 PANTHER PTHR11119:SF44 4 448 9.7E-261 T 21-04-2016 VFU_RS02710 df6f1cf37dcdb32367c82c39fa41f435 463 PANTHER PTHR11119 4 448 9.7E-261 T 21-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 VFU_RS02710 df6f1cf37dcdb32367c82c39fa41f435 463 Pfam PF00860 Permease family 23 415 1.4E-97 T 21-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 VFU_RS02710 df6f1cf37dcdb32367c82c39fa41f435 463 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 18 445 3.0E-126 T 21-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 VFU_RS02710 df6f1cf37dcdb32367c82c39fa41f435 463 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 363 383 - T 21-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 VFU_RS04305 c7f90e5500358bf6c697c16bf0011add 254 PANTHER PTHR35272 3 253 8.6E-95 T 21-04-2016 VFU_RS04305 c7f90e5500358bf6c697c16bf0011add 254 Gene3D G3DSA:3.40.30.10 118 253 1.8E-43 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS04305 c7f90e5500358bf6c697c16bf0011add 254 Pfam PF13098 Thioredoxin-like domain 123 251 9.9E-26 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS04305 c7f90e5500358bf6c697c16bf0011add 254 SUPERFAMILY SSF52833 111 253 8.59E-39 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS04305 c7f90e5500358bf6c697c16bf0011add 254 ProSitePatterns PS00194 Thioredoxin family active site. 130 148 - T 21-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 VFU_RS04305 c7f90e5500358bf6c697c16bf0011add 254 PANTHER PTHR35272:SF3 3 253 8.6E-95 T 21-04-2016 VFU_RS04305 c7f90e5500358bf6c697c16bf0011add 254 Pfam PF10411 Disulfide bond isomerase protein N-terminus 42 91 1.0E-13 T 21-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal VFU_RS04305 c7f90e5500358bf6c697c16bf0011add 254 SUPERFAMILY SSF54423 39 92 3.01E-13 T 21-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal VFU_RS04305 c7f90e5500358bf6c697c16bf0011add 254 Gene3D G3DSA:3.10.450.70 38 93 5.1E-20 T 21-04-2016 IPR009094 Disulphide bond isomerase, DsbC, N-terminal VFU_RS04810 b703678d65e1deccc89970b0d2559481 948 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 21-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VFU_RS04810 b703678d65e1deccc89970b0d2559481 948 SUPERFAMILY SSF52374 408 652 8.45E-138 T 21-04-2016 VFU_RS04810 b703678d65e1deccc89970b0d2559481 948 SUPERFAMILY SSF52374 4 202 8.45E-138 T 21-04-2016 VFU_RS04810 b703678d65e1deccc89970b0d2559481 948 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 854 2.6E-293 T 21-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 VFU_RS04810 b703678d65e1deccc89970b0d2559481 948 SUPERFAMILY SSF47323 657 939 4.67E-74 T 21-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VFU_RS04810 b703678d65e1deccc89970b0d2559481 948 Pfam PF06827 Zinc finger found in FPG and IleRS 909 936 9.6E-7 T 21-04-2016 IPR010663 Zinc finger, FPG/IleRS-type VFU_RS04810 b703678d65e1deccc89970b0d2559481 948 PANTHER PTHR11946 288 918 0.0 T 21-04-2016 VFU_RS04810 b703678d65e1deccc89970b0d2559481 948 PANTHER PTHR11946 237 262 0.0 T 21-04-2016 VFU_RS04810 b703678d65e1deccc89970b0d2559481 948 PANTHER PTHR11946 6 215 0.0 T 21-04-2016 VFU_RS04810 b703678d65e1deccc89970b0d2559481 948 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 939 21.507 T 21-04-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 VFU_RS04810 b703678d65e1deccc89970b0d2559481 948 Gene3D G3DSA:3.40.50.620 408 641 1.6E-137 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VFU_RS04810 b703678d65e1deccc89970b0d2559481 948 Gene3D G3DSA:3.40.50.620 17 205 1.6E-137 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VFU_RS04810 b703678d65e1deccc89970b0d2559481 948 SUPERFAMILY SSF50677 203 408 4.32E-55 T 21-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 VFU_RS04810 b703678d65e1deccc89970b0d2559481 948 Gene3D G3DSA:1.10.730.10 646 838 1.7E-39 T 21-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VFU_RS04810 b703678d65e1deccc89970b0d2559481 948 PANTHER PTHR11946:SF11 288 918 0.0 T 21-04-2016 VFU_RS04810 b703678d65e1deccc89970b0d2559481 948 PANTHER PTHR11946:SF11 237 262 0.0 T 21-04-2016 VFU_RS04810 b703678d65e1deccc89970b0d2559481 948 PANTHER PTHR11946:SF11 6 215 0.0 T 21-04-2016 VFU_RS04810 b703678d65e1deccc89970b0d2559481 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 566 575 5.3E-32 T 21-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 VFU_RS04810 b703678d65e1deccc89970b0d2559481 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 5.3E-32 T 21-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 VFU_RS04810 b703678d65e1deccc89970b0d2559481 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 241 264 5.3E-32 T 21-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 VFU_RS04810 b703678d65e1deccc89970b0d2559481 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 406 421 5.3E-32 T 21-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 VFU_RS04810 b703678d65e1deccc89970b0d2559481 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 531 544 5.3E-32 T 21-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 VFU_RS04810 b703678d65e1deccc89970b0d2559481 948 Pfam PF08264 Anticodon-binding domain of tRNA 690 852 1.2E-26 T 21-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 VFU_RS04810 b703678d65e1deccc89970b0d2559481 948 Gene3D G3DSA:3.90.740.10 207 394 4.0E-55 T 21-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 VFU_RS04810 b703678d65e1deccc89970b0d2559481 948 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 646 1.8E-229 T 21-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VFU_RS14500 9a5ff48dfcc65cd98ca69ac27d51be67 329 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 3 324 39.705 T 21-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS14500 9a5ff48dfcc65cd98ca69ac27d51be67 329 SUPERFAMILY SSF88946 51 160 4.71E-46 T 21-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS14500 9a5ff48dfcc65cd98ca69ac27d51be67 329 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 86 313 6.0E-37 T 21-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS14500 9a5ff48dfcc65cd98ca69ac27d51be67 329 PANTHER PTHR30603:SF15 1 329 1.1E-185 T 21-04-2016 VFU_RS14500 9a5ff48dfcc65cd98ca69ac27d51be67 329 SUPERFAMILY SSF88659 220 319 4.36E-24 T 21-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS14500 9a5ff48dfcc65cd98ca69ac27d51be67 329 SUPERFAMILY SSF88659 163 236 2.01E-15 T 21-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS14500 9a5ff48dfcc65cd98ca69ac27d51be67 329 Pfam PF00140 Sigma-70 factor, region 1.2 52 85 2.7E-13 T 21-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS14500 9a5ff48dfcc65cd98ca69ac27d51be67 329 Gene3D G3DSA:1.10.601.10 18 159 2.0E-60 T 21-04-2016 VFU_RS14500 9a5ff48dfcc65cd98ca69ac27d51be67 329 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 45 324 6.5E-139 T 21-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS14500 9a5ff48dfcc65cd98ca69ac27d51be67 329 PANTHER PTHR30603 1 329 1.1E-185 T 21-04-2016 VFU_RS14500 9a5ff48dfcc65cd98ca69ac27d51be67 329 PRINTS PR00046 Major sigma-70 factor signature 283 298 1.4E-27 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS14500 9a5ff48dfcc65cd98ca69ac27d51be67 329 PRINTS PR00046 Major sigma-70 factor signature 114 127 1.4E-27 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS14500 9a5ff48dfcc65cd98ca69ac27d51be67 329 PRINTS PR00046 Major sigma-70 factor signature 262 274 1.4E-27 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS14500 9a5ff48dfcc65cd98ca69ac27d51be67 329 PRINTS PR00046 Major sigma-70 factor signature 138 146 1.4E-27 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS14500 9a5ff48dfcc65cd98ca69ac27d51be67 329 PRINTS PR00046 Major sigma-70 factor signature 298 309 1.4E-27 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS14500 9a5ff48dfcc65cd98ca69ac27d51be67 329 Pfam PF04545 Sigma-70, region 4 258 311 6.9E-18 T 21-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS14500 9a5ff48dfcc65cd98ca69ac27d51be67 329 Gene3D G3DSA:1.10.10.10 253 318 9.9E-24 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS14500 9a5ff48dfcc65cd98ca69ac27d51be67 329 Pfam PF04539 Sigma-70 region 3 170 243 5.2E-22 T 21-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS14500 9a5ff48dfcc65cd98ca69ac27d51be67 329 Gene3D G3DSA:1.10.10.10 163 212 9.2E-16 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS14500 9a5ff48dfcc65cd98ca69ac27d51be67 329 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 283 309 - T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS14500 9a5ff48dfcc65cd98ca69ac27d51be67 329 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 114 127 - T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS14500 9a5ff48dfcc65cd98ca69ac27d51be67 329 Pfam PF04542 Sigma-70 region 2 90 159 6.4E-20 T 21-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS04730 948a009aea87cd42537003c0fe985c0e 444 Gene3D G3DSA:1.10.10.60 383 438 4.3E-10 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS04730 948a009aea87cd42537003c0fe985c0e 444 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 170 183 - T 21-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VFU_RS04730 948a009aea87cd42537003c0fe985c0e 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 21-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VFU_RS04730 948a009aea87cd42537003c0fe985c0e 444 SMART SM00382 166 303 2.4E-4 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS04730 948a009aea87cd42537003c0fe985c0e 444 SUPERFAMILY SSF52172 27 190 4.69E-6 T 21-04-2016 IPR011006 CheY-like superfamily VFU_RS04730 948a009aea87cd42537003c0fe985c0e 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 419 439 3.6E-5 T 21-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VFU_RS04730 948a009aea87cd42537003c0fe985c0e 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 402 419 3.6E-5 T 21-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VFU_RS04730 948a009aea87cd42537003c0fe985c0e 444 SUPERFAMILY SSF46689 350 438 1.25E-9 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS04730 948a009aea87cd42537003c0fe985c0e 444 PANTHER PTHR32071 27 444 1.5E-222 T 21-04-2016 VFU_RS04730 948a009aea87cd42537003c0fe985c0e 444 Gene3D G3DSA:3.40.50.300 145 311 6.4E-45 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS04730 948a009aea87cd42537003c0fe985c0e 444 Pfam PF00158 Sigma-54 interaction domain 146 305 2.8E-37 T 21-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VFU_RS04730 948a009aea87cd42537003c0fe985c0e 444 SUPERFAMILY SSF52540 146 378 3.27E-48 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS04730 948a009aea87cd42537003c0fe985c0e 444 Pfam PF02954 Bacterial regulatory protein, Fis family 396 435 6.4E-8 T 21-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VFU_RS04730 948a009aea87cd42537003c0fe985c0e 444 PANTHER PTHR32071:SF34 27 444 1.5E-222 T 21-04-2016 VFU_RS04730 948a009aea87cd42537003c0fe985c0e 444 Gene3D G3DSA:1.10.8.60 312 382 2.4E-23 T 21-04-2016 VFU_RS01160 a8e927952d81b22f06ab1ef884dc8329 266 SUPERFAMILY SSF46689 167 216 2.02E-9 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS01160 a8e927952d81b22f06ab1ef884dc8329 266 SUPERFAMILY SSF46689 219 263 2.96E-8 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS01160 a8e927952d81b22f06ab1ef884dc8329 266 PANTHER PTHR11019:SF94 1 261 2.0E-106 T 21-04-2016 VFU_RS01160 a8e927952d81b22f06ab1ef884dc8329 266 Pfam PF12833 Helix-turn-helix domain 188 263 6.9E-21 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VFU_RS01160 a8e927952d81b22f06ab1ef884dc8329 266 Pfam PF02311 AraC-like ligand binding domain 13 142 1.5E-21 T 21-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VFU_RS01160 a8e927952d81b22f06ab1ef884dc8329 266 PANTHER PTHR11019 1 261 2.0E-106 T 21-04-2016 VFU_RS01160 a8e927952d81b22f06ab1ef884dc8329 266 Gene3D G3DSA:2.60.120.280 22 101 5.7E-13 T 21-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VFU_RS01160 a8e927952d81b22f06ab1ef884dc8329 266 Gene3D G3DSA:1.10.10.60 165 219 5.2E-17 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS01160 a8e927952d81b22f06ab1ef884dc8329 266 SMART SM00342 182 264 2.0E-23 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VFU_RS01160 a8e927952d81b22f06ab1ef884dc8329 266 SUPERFAMILY SSF51215 23 137 5.49E-18 T 21-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VFU_RS01160 a8e927952d81b22f06ab1ef884dc8329 266 Gene3D G3DSA:1.10.10.60 220 263 1.6E-11 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS02735 adb4bad0e877aa714f68e3ed2596562e 207 Gene3D G3DSA:3.40.50.300 88 203 1.4E-53 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS02735 adb4bad0e877aa714f68e3ed2596562e 207 Gene3D G3DSA:3.40.50.300 2 17 1.4E-53 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS02735 adb4bad0e877aa714f68e3ed2596562e 207 SUPERFAMILY SSF52540 3 189 3.36E-70 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS02735 adb4bad0e877aa714f68e3ed2596562e 207 Pfam PF00625 Guanylate kinase 5 185 2.6E-60 T 21-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit VFU_RS02735 adb4bad0e877aa714f68e3ed2596562e 207 PANTHER PTHR23117:SF13 1 200 1.2E-101 T 21-04-2016 VFU_RS02735 adb4bad0e877aa714f68e3ed2596562e 207 Gene3D G3DSA:3.40.50.300 18 41 8.7E-4 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS02735 adb4bad0e877aa714f68e3ed2596562e 207 PANTHER PTHR23117 1 200 1.2E-101 T 21-04-2016 VFU_RS02735 adb4bad0e877aa714f68e3ed2596562e 207 Gene3D G3DSA:3.30.63.10 42 87 3.9E-29 T 21-04-2016 VFU_RS02735 adb4bad0e877aa714f68e3ed2596562e 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 1.4E-75 T 21-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 VFU_RS02735 adb4bad0e877aa714f68e3ed2596562e 207 SMART SM00072 3 187 1.2E-74 T 21-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit VFU_RS02735 adb4bad0e877aa714f68e3ed2596562e 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 37.793 T 21-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 VFU_RS02735 adb4bad0e877aa714f68e3ed2596562e 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 21-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 VFU_RS06075 1047cce32ea11bba041730fe9343658f 231 PANTHER PTHR30249 1 231 1.4E-130 T 21-04-2016 VFU_RS06075 1047cce32ea11bba041730fe9343658f 231 PANTHER PTHR30249:SF4 1 231 1.4E-130 T 21-04-2016 VFU_RS06075 1047cce32ea11bba041730fe9343658f 231 Pfam PF04172 LrgB-like family 16 226 2.2E-70 T 21-04-2016 IPR007300 CidB/LrgB family VFU_RS08945 a0526ee9eda29a0b5b49a32c095194f5 345 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 83 334 7.9E-40 T 21-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 VFU_RS08945 a0526ee9eda29a0b5b49a32c095194f5 345 PANTHER PTHR11820:SF85 10 268 1.4E-144 T 21-04-2016 VFU_RS08945 a0526ee9eda29a0b5b49a32c095194f5 345 PANTHER PTHR11820:SF85 284 336 1.4E-144 T 21-04-2016 VFU_RS08945 a0526ee9eda29a0b5b49a32c095194f5 345 Gene3D G3DSA:3.90.850.10 68 270 2.1E-38 T 21-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 VFU_RS08945 a0526ee9eda29a0b5b49a32c095194f5 345 Gene3D G3DSA:3.90.850.10 306 317 2.1E-38 T 21-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 VFU_RS08945 a0526ee9eda29a0b5b49a32c095194f5 345 SUPERFAMILY SSF56529 77 335 9.62E-55 T 21-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 VFU_RS08945 a0526ee9eda29a0b5b49a32c095194f5 345 PANTHER PTHR11820 10 268 1.4E-144 T 21-04-2016 VFU_RS08945 a0526ee9eda29a0b5b49a32c095194f5 345 PANTHER PTHR11820 284 336 1.4E-144 T 21-04-2016 VFU_RS11390 a4092abe1cd6a892eebf6580e6c7c9c3 147 PANTHER PTHR30558:SF7 4 144 2.2E-55 T 21-04-2016 VFU_RS11390 a4092abe1cd6a892eebf6580e6c7c9c3 147 PANTHER PTHR30558 4 144 2.2E-55 T 21-04-2016 VFU_RS11390 a4092abe1cd6a892eebf6580e6c7c9c3 147 TIGRFAM TIGR02801 tolR: protein TolR 12 144 6.0E-38 T 21-04-2016 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 VFU_RS11390 a4092abe1cd6a892eebf6580e6c7c9c3 147 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 144 6.3E-26 T 21-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 VFU_RS10690 3cd4f69790e7a0940349a41e974368a6 241 PANTHER PTHR39168:SF1 22 241 3.2E-44 T 21-04-2016 VFU_RS10690 3cd4f69790e7a0940349a41e974368a6 241 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 29 44 3.5E-5 T 21-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VFU_RS10690 3cd4f69790e7a0940349a41e974368a6 241 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 62 77 3.5E-5 T 21-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VFU_RS10690 3cd4f69790e7a0940349a41e974368a6 241 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 77 92 3.5E-5 T 21-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VFU_RS10690 3cd4f69790e7a0940349a41e974368a6 241 Pfam PF12840 Helix-turn-helix domain 27 82 9.7E-10 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS10690 3cd4f69790e7a0940349a41e974368a6 241 SMART SM00418 27 106 3.7E-16 T 21-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VFU_RS10690 3cd4f69790e7a0940349a41e974368a6 241 PANTHER PTHR39168 22 241 3.2E-44 T 21-04-2016 VFU_RS10690 3cd4f69790e7a0940349a41e974368a6 241 Gene3D G3DSA:1.10.10.10 11 107 1.9E-22 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS10690 3cd4f69790e7a0940349a41e974368a6 241 SUPERFAMILY SSF46785 21 107 1.48E-19 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS04120 6a0e0f8ac85a6639649768fc4c1bafb8 243 SUPERFAMILY SSF63892 4 242 1.83E-101 T 21-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 VFU_RS04120 6a0e0f8ac85a6639649768fc4c1bafb8 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 131.62 T 21-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 VFU_RS04120 6a0e0f8ac85a6639649768fc4c1bafb8 243 Gene3D G3DSA:3.20.20.70 3 242 1.1E-111 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS04120 6a0e0f8ac85a6639649768fc4c1bafb8 243 PANTHER PTHR30456:SF0 2 243 6.0E-144 T 21-04-2016 VFU_RS04120 6a0e0f8ac85a6639649768fc4c1bafb8 243 PANTHER PTHR30456 2 243 6.0E-144 T 21-04-2016 VFU_RS04120 6a0e0f8ac85a6639649768fc4c1bafb8 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 238 4.5E-98 T 21-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 VFU_RS04120 6a0e0f8ac85a6639649768fc4c1bafb8 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 4.1E-104 T 21-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 VFU_RS10825 dcef65d5e163dcd8a756fdbf95acacb4 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 3.0E-13 T 21-04-2016 VFU_RS10825 dcef65d5e163dcd8a756fdbf95acacb4 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 82 93 3.0E-13 T 21-04-2016 VFU_RS10825 dcef65d5e163dcd8a756fdbf95acacb4 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 55 64 3.0E-13 T 21-04-2016 VFU_RS10825 dcef65d5e163dcd8a756fdbf95acacb4 196 Gene3D G3DSA:3.40.50.880 6 192 1.0E-55 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like VFU_RS10825 dcef65d5e163dcd8a756fdbf95acacb4 196 Pfam PF00117 Glutamine amidotransferase class-I 9 189 4.2E-45 T 21-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 VFU_RS10825 dcef65d5e163dcd8a756fdbf95acacb4 196 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 52 66 2.2E-5 T 21-04-2016 VFU_RS10825 dcef65d5e163dcd8a756fdbf95acacb4 196 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 82 98 2.2E-5 T 21-04-2016 VFU_RS10825 dcef65d5e163dcd8a756fdbf95acacb4 196 PANTHER PTHR11922:SF25 6 192 2.5E-85 T 21-04-2016 VFU_RS10825 dcef65d5e163dcd8a756fdbf95acacb4 196 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 7 191 2.6E-55 T 21-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VFU_RS10825 dcef65d5e163dcd8a756fdbf95acacb4 196 SUPERFAMILY SSF52317 6 195 3.77E-49 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like VFU_RS10825 dcef65d5e163dcd8a756fdbf95acacb4 196 PANTHER PTHR11922 6 192 2.5E-85 T 21-04-2016 VFU_RS10825 dcef65d5e163dcd8a756fdbf95acacb4 196 PRINTS PR00097 Anthranilate synthase component II signature 55 64 3.6E-34 T 21-04-2016 VFU_RS10825 dcef65d5e163dcd8a756fdbf95acacb4 196 PRINTS PR00097 Anthranilate synthase component II signature 7 21 3.6E-34 T 21-04-2016 VFU_RS10825 dcef65d5e163dcd8a756fdbf95acacb4 196 PRINTS PR00097 Anthranilate synthase component II signature 107 115 3.6E-34 T 21-04-2016 VFU_RS10825 dcef65d5e163dcd8a756fdbf95acacb4 196 PRINTS PR00097 Anthranilate synthase component II signature 127 139 3.6E-34 T 21-04-2016 VFU_RS10825 dcef65d5e163dcd8a756fdbf95acacb4 196 PRINTS PR00097 Anthranilate synthase component II signature 82 93 3.6E-34 T 21-04-2016 VFU_RS10825 dcef65d5e163dcd8a756fdbf95acacb4 196 PRINTS PR00097 Anthranilate synthase component II signature 169 182 3.6E-34 T 21-04-2016 VFU_RS15360 b75629d19a2d9bd766fb2adc87219332 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 21-04-2016 IPR020070 Ribosomal protein L9, N-terminal VFU_RS15360 b75629d19a2d9bd766fb2adc87219332 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 9.0E-54 T 21-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS15360 b75629d19a2d9bd766fb2adc87219332 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 25.823 T 21-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS15360 b75629d19a2d9bd766fb2adc87219332 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 4.6E-25 T 21-04-2016 IPR020069 Ribosomal protein L9, C-terminal VFU_RS15360 b75629d19a2d9bd766fb2adc87219332 149 Gene3D G3DSA:3.10.430.100 61 149 2.9E-28 T 21-04-2016 IPR020069 Ribosomal protein L9, C-terminal VFU_RS15360 b75629d19a2d9bd766fb2adc87219332 149 SUPERFAMILY SSF55658 1 57 1.01E-18 T 21-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal VFU_RS15360 b75629d19a2d9bd766fb2adc87219332 149 Gene3D G3DSA:3.40.5.10 1 52 8.1E-25 T 21-04-2016 IPR020070 Ribosomal protein L9, N-terminal VFU_RS15360 b75629d19a2d9bd766fb2adc87219332 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 3.3E-21 T 21-04-2016 IPR020070 Ribosomal protein L9, N-terminal VFU_RS15360 b75629d19a2d9bd766fb2adc87219332 149 SUPERFAMILY SSF55653 60 149 9.94E-26 T 21-04-2016 IPR020069 Ribosomal protein L9, C-terminal VFU_RS15360 b75629d19a2d9bd766fb2adc87219332 149 PANTHER PTHR21368 1 149 3.1E-52 T 21-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS06660 0b08ccd9e79c0ccff97f8c37dda95810 435 PANTHER PTHR11236:SF3 38 425 3.2E-132 T 21-04-2016 VFU_RS06660 0b08ccd9e79c0ccff97f8c37dda95810 435 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 85 424 4.6E-105 T 21-04-2016 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 VFU_RS06660 0b08ccd9e79c0ccff97f8c37dda95810 435 SUPERFAMILY SSF56322 31 425 2.49E-99 T 21-04-2016 IPR005801 ADC synthase GO:0009058 VFU_RS06660 0b08ccd9e79c0ccff97f8c37dda95810 435 Gene3D G3DSA:3.60.120.10 15 425 4.4E-88 T 21-04-2016 IPR005801 ADC synthase GO:0009058 VFU_RS06660 0b08ccd9e79c0ccff97f8c37dda95810 435 Hamap MF_01935 Isochorismate synthase MenF [menF]. 4 427 37.785 T 21-04-2016 VFU_RS06660 0b08ccd9e79c0ccff97f8c37dda95810 435 PANTHER PTHR11236 38 425 3.2E-132 T 21-04-2016 VFU_RS06660 0b08ccd9e79c0ccff97f8c37dda95810 435 Pfam PF00425 chorismate binding enzyme 165 417 8.4E-71 T 21-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal VFU_RS01805 476bedb7e67329e5216f31c7620062ae 140 SUPERFAMILY SSF46604 89 138 1.57E-14 T 21-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain VFU_RS01805 476bedb7e67329e5216f31c7620062ae 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 91 1.0E-38 T 21-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 VFU_RS01805 476bedb7e67329e5216f31c7620062ae 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 134 7.9E-11 T 21-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain VFU_RS01805 476bedb7e67329e5216f31c7620062ae 140 Gene3D G3DSA:2.60.15.10 5 92 1.5E-28 T 21-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 VFU_RS01805 476bedb7e67329e5216f31c7620062ae 140 PANTHER PTHR13822 1 140 2.8E-43 T 21-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VFU_RS01805 476bedb7e67329e5216f31c7620062ae 140 SUPERFAMILY SSF51344 5 87 1.01E-23 T 21-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 VFU_RS01805 476bedb7e67329e5216f31c7620062ae 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 134 5.9E-43 T 21-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VFU_RS01805 476bedb7e67329e5216f31c7620062ae 140 Gene3D G3DSA:1.20.5.440 93 135 5.7E-23 T 21-04-2016 VFU_RS01805 476bedb7e67329e5216f31c7620062ae 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 85 2.3E-28 T 21-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 VFU_RS01805 476bedb7e67329e5216f31c7620062ae 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 4 132 20.199 T 21-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VFU_RS04895 c0ca23db9d8c07c6bd00847d1817fa60 97 Gene3D G3DSA:1.10.1270.10 2 96 2.2E-36 T 21-04-2016 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 VFU_RS04895 c0ca23db9d8c07c6bd00847d1817fa60 97 PANTHER PTHR38025 1 96 4.3E-33 T 21-04-2016 VFU_RS04895 c0ca23db9d8c07c6bd00847d1817fa60 97 Pfam PF01371 Trp repressor protein 9 94 8.3E-31 T 21-04-2016 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 VFU_RS04895 c0ca23db9d8c07c6bd00847d1817fa60 97 SUPERFAMILY SSF48295 2 96 6.28E-29 T 21-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 VFU_RS04895 c0ca23db9d8c07c6bd00847d1817fa60 97 PANTHER PTHR38025:SF1 1 96 4.3E-33 T 21-04-2016 VFU_RS04895 c0ca23db9d8c07c6bd00847d1817fa60 97 Hamap MF_00475 Trp operon repressor [trpR]. 6 97 20.495 T 21-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 VFU_RS04895 c0ca23db9d8c07c6bd00847d1817fa60 97 TIGRFAM TIGR01321 TrpR: trp operon repressor 1 83 4.1E-25 T 21-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 VFU_RS04895 c0ca23db9d8c07c6bd00847d1817fa60 97 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 6 91 1.0E-30 T 21-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 VFU_RS04895 c0ca23db9d8c07c6bd00847d1817fa60 97 PIRSF PIRSF003196 1 97 6.1E-37 T 21-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 VFU_RS11360 3bbec87f08923bb9af5ac75cd1f52215 189 SUPERFAMILY SSF101327 3 176 1.7E-29 T 21-04-2016 IPR011978 Uncharacterised protein family UPF0149 VFU_RS11360 3bbec87f08923bb9af5ac75cd1f52215 189 Pfam PF03695 Uncharacterised protein family (UPF0149) 3 178 1.2E-32 T 21-04-2016 IPR011978 Uncharacterised protein family UPF0149 VFU_RS11360 3bbec87f08923bb9af5ac75cd1f52215 189 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 3 174 1.9E-40 T 21-04-2016 IPR011978 Uncharacterised protein family UPF0149 VFU_RS12775 e668ccc00ca604d861fbcf5141cddbde 287 SMART SM00771 147 277 4.2E-70 T 21-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 VFU_RS12775 e668ccc00ca604d861fbcf5141cddbde 287 PANTHER PTHR38685:SF1 1 280 2.5E-66 T 21-04-2016 VFU_RS12775 e668ccc00ca604d861fbcf5141cddbde 287 SUPERFAMILY SSF64383 149 282 1.28E-47 T 21-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 VFU_RS12775 e668ccc00ca604d861fbcf5141cddbde 287 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 149 276 9.2E-46 T 21-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 VFU_RS12775 e668ccc00ca604d861fbcf5141cddbde 287 Gene3D G3DSA:3.30.1400.10 147 283 6.1E-57 T 21-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 VFU_RS12775 e668ccc00ca604d861fbcf5141cddbde 287 PANTHER PTHR38685 1 280 2.5E-66 T 21-04-2016 VFU_RS12775 e668ccc00ca604d861fbcf5141cddbde 287 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 3 277 2.6E-86 T 21-04-2016 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 VFU_RS12775 e668ccc00ca604d861fbcf5141cddbde 287 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 150 285 1.0E-65 T 21-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 VFU_RS12775 e668ccc00ca604d861fbcf5141cddbde 287 Hamap MF_00509 Cell division protein ZipA [zipA]. 2 279 24.486 T 21-04-2016 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 VFU_RS10775 3f0561e7eea295c492d0db1806a49df4 816 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 166 605 1.7E-110 T 21-04-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VFU_RS10775 3f0561e7eea295c492d0db1806a49df4 816 PRINTS PR00738 Glycosyl hydrolase family 20 signature 241 258 1.2E-40 T 21-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VFU_RS10775 3f0561e7eea295c492d0db1806a49df4 816 PRINTS PR00738 Glycosyl hydrolase family 20 signature 189 210 1.2E-40 T 21-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VFU_RS10775 3f0561e7eea295c492d0db1806a49df4 816 PRINTS PR00738 Glycosyl hydrolase family 20 signature 291 309 1.2E-40 T 21-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VFU_RS10775 3f0561e7eea295c492d0db1806a49df4 816 PRINTS PR00738 Glycosyl hydrolase family 20 signature 313 326 1.2E-40 T 21-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VFU_RS10775 3f0561e7eea295c492d0db1806a49df4 816 PRINTS PR00738 Glycosyl hydrolase family 20 signature 125 145 1.2E-40 T 21-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VFU_RS10775 3f0561e7eea295c492d0db1806a49df4 816 PRINTS PR00738 Glycosyl hydrolase family 20 signature 160 177 1.2E-40 T 21-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VFU_RS10775 3f0561e7eea295c492d0db1806a49df4 816 SUPERFAMILY SSF51445 166 425 3.84E-100 T 21-04-2016 IPR017853 Glycoside hydrolase superfamily VFU_RS10775 3f0561e7eea295c492d0db1806a49df4 816 SUPERFAMILY SSF51445 530 618 3.84E-100 T 21-04-2016 IPR017853 Glycoside hydrolase superfamily VFU_RS10775 3f0561e7eea295c492d0db1806a49df4 816 SUPERFAMILY SSF55545 31 165 6.8E-29 T 21-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like VFU_RS10775 3f0561e7eea295c492d0db1806a49df4 816 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 30 162 8.2E-14 T 21-04-2016 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VFU_RS10775 3f0561e7eea295c492d0db1806a49df4 816 Gene3D G3DSA:3.30.379.10 26 163 4.1E-27 T 21-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like VFU_RS10775 3f0561e7eea295c492d0db1806a49df4 816 PANTHER PTHR22600 7 429 4.6E-130 T 21-04-2016 VFU_RS10775 3f0561e7eea295c492d0db1806a49df4 816 PANTHER PTHR22600 559 618 4.6E-130 T 21-04-2016 VFU_RS10775 3f0561e7eea295c492d0db1806a49df4 816 Gene3D G3DSA:3.20.20.80 164 455 3.0E-127 T 21-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VFU_RS10775 3f0561e7eea295c492d0db1806a49df4 816 Gene3D G3DSA:3.20.20.80 553 624 3.0E-127 T 21-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VFU_RS13505 66566827fee49702a87d6483ae75b112 430 PANTHER PTHR11963:SF20 43 430 3.1E-247 T 21-04-2016 VFU_RS13505 66566827fee49702a87d6483ae75b112 430 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 109 421 4.1E-100 T 21-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VFU_RS13505 66566827fee49702a87d6483ae75b112 430 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 275 282 - T 21-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VFU_RS13505 66566827fee49702a87d6483ae75b112 430 Gene3D G3DSA:3.40.630.10 96 428 6.6E-117 T 21-04-2016 VFU_RS13505 66566827fee49702a87d6483ae75b112 430 SUPERFAMILY SSF53187 104 427 6.28E-102 T 21-04-2016 VFU_RS13505 66566827fee49702a87d6483ae75b112 430 PIRSF PIRSF036388 1 430 8.2E-226 T 21-04-2016 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 VFU_RS13505 66566827fee49702a87d6483ae75b112 430 PRINTS PR00481 Cytosol aminopeptidase signature 271 291 5.5E-47 T 21-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VFU_RS13505 66566827fee49702a87d6483ae75b112 430 PRINTS PR00481 Cytosol aminopeptidase signature 299 314 5.5E-47 T 21-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VFU_RS13505 66566827fee49702a87d6483ae75b112 430 PRINTS PR00481 Cytosol aminopeptidase signature 212 233 5.5E-47 T 21-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VFU_RS13505 66566827fee49702a87d6483ae75b112 430 PRINTS PR00481 Cytosol aminopeptidase signature 190 207 5.5E-47 T 21-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VFU_RS13505 66566827fee49702a87d6483ae75b112 430 PRINTS PR00481 Cytosol aminopeptidase signature 249 270 5.5E-47 T 21-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VFU_RS13505 66566827fee49702a87d6483ae75b112 430 Pfam PF12404 Peptidase 5 81 2.4E-32 T 21-04-2016 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 VFU_RS13505 66566827fee49702a87d6483ae75b112 430 Hamap MF_00504 Peptidase B [pepB]. 3 427 65.177 T 21-04-2016 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 VFU_RS13505 66566827fee49702a87d6483ae75b112 430 PANTHER PTHR11963 43 430 3.1E-247 T 21-04-2016 VFU_RS03190 e6c5f5861df991c228a7f1858ebad71e 485 SUPERFAMILY SSF53720 3 449 2.09E-125 T 21-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 VFU_RS03190 e6c5f5861df991c228a7f1858ebad71e 485 Gene3D G3DSA:3.40.605.10 4 256 6.8E-75 T 21-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 VFU_RS03190 e6c5f5861df991c228a7f1858ebad71e 485 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 3 484 2.6E-226 T 21-04-2016 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71|UniPathway: UPA00185 VFU_RS03190 e6c5f5861df991c228a7f1858ebad71e 485 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 1 485 55.947 T 21-04-2016 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71|UniPathway: UPA00185 VFU_RS03190 e6c5f5861df991c228a7f1858ebad71e 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 242 249 - T 21-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 VFU_RS03190 e6c5f5861df991c228a7f1858ebad71e 485 PANTHER PTHR11699 1 469 9.1E-288 T 21-04-2016 VFU_RS03190 e6c5f5861df991c228a7f1858ebad71e 485 Pfam PF00171 Aldehyde dehydrogenase family 9 453 7.6E-123 T 21-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 VFU_RS03190 e6c5f5861df991c228a7f1858ebad71e 485 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 21-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 VFU_RS03190 e6c5f5861df991c228a7f1858ebad71e 485 Gene3D G3DSA:3.40.309.10 257 442 2.4E-47 T 21-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 VFU_RS03190 e6c5f5861df991c228a7f1858ebad71e 485 PANTHER PTHR11699:SF197 1 469 9.1E-288 T 21-04-2016 VFU_RS03225 658a9d73425f9a3e6510fe5292e62515 640 PANTHER PTHR19211 1 557 0.0 T 21-04-2016 VFU_RS03225 658a9d73425f9a3e6510fe5292e62515 640 SUPERFAMILY SSF52540 277 494 1.24E-43 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS03225 658a9d73425f9a3e6510fe5292e62515 640 Pfam PF00005 ABC transporter 17 178 2.0E-20 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS03225 658a9d73425f9a3e6510fe5292e62515 640 Pfam PF00005 ABC transporter 328 459 7.6E-24 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS03225 658a9d73425f9a3e6510fe5292e62515 640 SMART SM00382 337 503 9.4E-11 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS03225 658a9d73425f9a3e6510fe5292e62515 640 SMART SM00382 26 223 4.7E-12 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS03225 658a9d73425f9a3e6510fe5292e62515 640 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS03225 658a9d73425f9a3e6510fe5292e62515 640 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS03225 658a9d73425f9a3e6510fe5292e62515 640 SUPERFAMILY SSF52540 119 257 2.04E-43 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS03225 658a9d73425f9a3e6510fe5292e62515 640 SUPERFAMILY SSF52540 2 92 2.04E-43 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS03225 658a9d73425f9a3e6510fe5292e62515 640 Gene3D G3DSA:3.40.50.300 2 273 4.8E-45 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS03225 658a9d73425f9a3e6510fe5292e62515 640 Pfam PF12848 ABC transporter 217 294 1.3E-27 T 21-04-2016 IPR032781 ABC-transporter extension domain VFU_RS03225 658a9d73425f9a3e6510fe5292e62515 640 Gene3D G3DSA:3.40.50.300 310 543 1.1E-43 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS03225 658a9d73425f9a3e6510fe5292e62515 640 PANTHER PTHR19211:SF49 1 557 0.0 T 21-04-2016 VFU_RS19960 ccc9da61a9dbadf9a2596c6bc9c08765 322 Gene3D G3DSA:3.30.70.270 126 289 4.3E-53 T 21-04-2016 VFU_RS19960 ccc9da61a9dbadf9a2596c6bc9c08765 322 Gene3D G3DSA:3.30.450.20 1 104 1.0E-4 T 21-04-2016 VFU_RS19960 ccc9da61a9dbadf9a2596c6bc9c08765 322 Pfam PF13188 PAS domain 3 48 2.3E-5 T 21-04-2016 IPR000014 PAS domain VFU_RS19960 ccc9da61a9dbadf9a2596c6bc9c08765 322 PANTHER PTHR10799 153 320 1.5E-47 T 21-04-2016 VFU_RS19960 ccc9da61a9dbadf9a2596c6bc9c08765 322 Pfam PF00990 Diguanylate cyclase, GGDEF domain 125 277 8.8E-44 T 21-04-2016 IPR000160 GGDEF domain VFU_RS19960 ccc9da61a9dbadf9a2596c6bc9c08765 322 SMART SM00267 113 281 9.4E-61 T 21-04-2016 IPR000160 GGDEF domain VFU_RS19960 ccc9da61a9dbadf9a2596c6bc9c08765 322 PANTHER PTHR10799:SF657 153 320 1.5E-47 T 21-04-2016 VFU_RS19960 ccc9da61a9dbadf9a2596c6bc9c08765 322 SUPERFAMILY SSF55073 129 283 1.02E-47 T 21-04-2016 IPR029787 Nucleotide cyclase VFU_RS19960 ccc9da61a9dbadf9a2596c6bc9c08765 322 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 125 278 7.5E-38 T 21-04-2016 IPR000160 GGDEF domain VFU_RS12335 a0b88d11efb264c37ae9e7ba8ed7dc30 232 Hamap MF_01146 Aquaporin Z [aqpZ]. 1 229 35.6 T 21-04-2016 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 VFU_RS12335 a0b88d11efb264c37ae9e7ba8ed7dc30 232 PANTHER PTHR19139:SF103 1 228 1.2E-75 T 21-04-2016 VFU_RS12335 a0b88d11efb264c37ae9e7ba8ed7dc30 232 SUPERFAMILY SSF81338 2 226 1.05E-69 T 21-04-2016 IPR023271 Aquaporin-like VFU_RS12335 a0b88d11efb264c37ae9e7ba8ed7dc30 232 PRINTS PR00783 Major intrinsic protein family signature 42 66 1.73E-51 T 21-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VFU_RS12335 a0b88d11efb264c37ae9e7ba8ed7dc30 232 PRINTS PR00783 Major intrinsic protein family signature 166 188 1.73E-51 T 21-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VFU_RS12335 a0b88d11efb264c37ae9e7ba8ed7dc30 232 PRINTS PR00783 Major intrinsic protein family signature 205 225 1.73E-51 T 21-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VFU_RS12335 a0b88d11efb264c37ae9e7ba8ed7dc30 232 PRINTS PR00783 Major intrinsic protein family signature 79 98 1.73E-51 T 21-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VFU_RS12335 a0b88d11efb264c37ae9e7ba8ed7dc30 232 PRINTS PR00783 Major intrinsic protein family signature 2 21 1.73E-51 T 21-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VFU_RS12335 a0b88d11efb264c37ae9e7ba8ed7dc30 232 PRINTS PR00783 Major intrinsic protein family signature 136 154 1.73E-51 T 21-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VFU_RS12335 a0b88d11efb264c37ae9e7ba8ed7dc30 232 ProSitePatterns PS00221 MIP family signature. 60 68 - T 21-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 VFU_RS12335 a0b88d11efb264c37ae9e7ba8ed7dc30 232 PANTHER PTHR19139 1 228 1.2E-75 T 21-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VFU_RS12335 a0b88d11efb264c37ae9e7ba8ed7dc30 232 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 222 5.8E-61 T 21-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VFU_RS12335 a0b88d11efb264c37ae9e7ba8ed7dc30 232 Pfam PF00230 Major intrinsic protein 2 222 1.7E-50 T 21-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VFU_RS12335 a0b88d11efb264c37ae9e7ba8ed7dc30 232 Gene3D G3DSA:1.20.1080.10 1 228 1.2E-68 T 21-04-2016 IPR023271 Aquaporin-like VFU_RS12645 eb7b48048660f403efab6a2463bf3eb2 404 ProSitePatterns PS01125 ROK family signature. 217 244 - T 21-04-2016 IPR000600 ROK family VFU_RS12645 eb7b48048660f403efab6a2463bf3eb2 404 SUPERFAMILY SSF53067 85 391 4.11E-56 T 21-04-2016 VFU_RS12645 eb7b48048660f403efab6a2463bf3eb2 404 SUPERFAMILY SSF46785 11 75 6.07E-17 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS12645 eb7b48048660f403efab6a2463bf3eb2 404 Gene3D G3DSA:1.10.10.10 11 78 4.3E-25 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS12645 eb7b48048660f403efab6a2463bf3eb2 404 Pfam PF00480 ROK family 86 390 1.1E-74 T 21-04-2016 IPR000600 ROK family VFU_RS12645 eb7b48048660f403efab6a2463bf3eb2 404 PANTHER PTHR18964:SF128 61 286 1.5E-188 T 21-04-2016 VFU_RS12645 eb7b48048660f403efab6a2463bf3eb2 404 PANTHER PTHR18964:SF128 304 401 1.5E-188 T 21-04-2016 VFU_RS12645 eb7b48048660f403efab6a2463bf3eb2 404 PANTHER PTHR18964 61 286 1.5E-188 T 21-04-2016 VFU_RS12645 eb7b48048660f403efab6a2463bf3eb2 404 PANTHER PTHR18964 304 401 1.5E-188 T 21-04-2016 VFU_RS12645 eb7b48048660f403efab6a2463bf3eb2 404 Gene3D G3DSA:3.30.420.40 222 374 2.6E-48 T 21-04-2016 VFU_RS12645 eb7b48048660f403efab6a2463bf3eb2 404 Gene3D G3DSA:3.30.420.40 83 221 9.8E-34 T 21-04-2016 VFU_RS05565 7bdba50ad386dcdad973b69f4332367b 644 SUPERFAMILY SSF64518 510 642 1.7E-24 T 21-04-2016 VFU_RS05565 7bdba50ad386dcdad973b69f4332367b 644 SUPERFAMILY SSF64518 169 409 1.7E-24 T 21-04-2016 VFU_RS05565 7bdba50ad386dcdad973b69f4332367b 644 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 599 642 9.6E-10 T 21-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VFU_RS05565 7bdba50ad386dcdad973b69f4332367b 644 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 5 338 3.8E-58 T 21-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VFU_RS05565 7bdba50ad386dcdad973b69f4332367b 644 PANTHER PTHR30033:SF1 515 644 1.5E-106 T 21-04-2016 VFU_RS05565 7bdba50ad386dcdad973b69f4332367b 644 PANTHER PTHR30033:SF1 1 489 1.5E-106 T 21-04-2016 VFU_RS05565 7bdba50ad386dcdad973b69f4332367b 644 PRINTS PR01005 Flagellar hook-associated protein signature 50 72 1.2E-8 T 21-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VFU_RS05565 7bdba50ad386dcdad973b69f4332367b 644 PRINTS PR01005 Flagellar hook-associated protein signature 158 182 1.2E-8 T 21-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VFU_RS05565 7bdba50ad386dcdad973b69f4332367b 644 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 1.2E-8 T 21-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VFU_RS05565 7bdba50ad386dcdad973b69f4332367b 644 PRINTS PR01005 Flagellar hook-associated protein signature 406 423 1.2E-8 T 21-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VFU_RS05565 7bdba50ad386dcdad973b69f4332367b 644 PANTHER PTHR30033 515 644 1.5E-106 T 21-04-2016 VFU_RS05565 7bdba50ad386dcdad973b69f4332367b 644 PANTHER PTHR30033 1 489 1.5E-106 T 21-04-2016 VFU_RS12565 e93ccf4f1b6c39c0a6f609922d5f0b63 213 PIRSF PIRSF001435 1 210 2.1E-51 T 21-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 VFU_RS12565 e93ccf4f1b6c39c0a6f609922d5f0b63 213 PANTHER PTHR10359 1 212 3.5E-91 T 21-04-2016 VFU_RS12565 e93ccf4f1b6c39c0a6f609922d5f0b63 213 SMART SM00525 186 206 1.8E-5 T 21-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 VFU_RS12565 e93ccf4f1b6c39c0a6f609922d5f0b63 213 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 21-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site VFU_RS12565 e93ccf4f1b6c39c0a6f609922d5f0b63 213 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.424 T 21-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 VFU_RS12565 e93ccf4f1b6c39c0a6f609922d5f0b63 213 Gene3D G3DSA:1.10.340.30 23 122 1.8E-33 T 21-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 VFU_RS12565 e93ccf4f1b6c39c0a6f609922d5f0b63 213 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 1.6E-18 T 21-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 VFU_RS12565 e93ccf4f1b6c39c0a6f609922d5f0b63 213 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 21-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 VFU_RS12565 e93ccf4f1b6c39c0a6f609922d5f0b63 213 PANTHER PTHR10359:SF18 1 212 3.5E-91 T 21-04-2016 VFU_RS12565 e93ccf4f1b6c39c0a6f609922d5f0b63 213 TIGRFAM TIGR01083 nth: endonuclease III 5 194 3.2E-89 T 21-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 VFU_RS12565 e93ccf4f1b6c39c0a6f609922d5f0b63 213 Gene3D G3DSA:1.10.1670.10 123 208 3.2E-35 T 21-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal VFU_RS12565 e93ccf4f1b6c39c0a6f609922d5f0b63 213 Pfam PF00633 Helix-hairpin-helix motif 100 127 5.0E-8 T 21-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 VFU_RS12565 e93ccf4f1b6c39c0a6f609922d5f0b63 213 SMART SM00478 38 185 3.2E-51 T 21-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 VFU_RS12565 e93ccf4f1b6c39c0a6f609922d5f0b63 213 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 7.7E-5 T 21-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 VFU_RS12565 e93ccf4f1b6c39c0a6f609922d5f0b63 213 SUPERFAMILY SSF48150 4 207 5.97E-72 T 21-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 VFU_RS02725 0b28ca467762dc8d6a6b66fd4a967af4 706 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 1.2E-34 T 21-04-2016 IPR007685 RelA/SpoT GO:0015969 VFU_RS02725 0b28ca467762dc8d6a6b66fd4a967af4 706 SUPERFAMILY SSF55021 632 703 4.96E-9 T 21-04-2016 VFU_RS02725 0b28ca467762dc8d6a6b66fd4a967af4 706 Gene3D G3DSA:3.30.70.260 630 697 3.6E-11 T 21-04-2016 VFU_RS02725 0b28ca467762dc8d6a6b66fd4a967af4 706 SUPERFAMILY SSF81301 180 393 3.27E-59 T 21-04-2016 VFU_RS02725 0b28ca467762dc8d6a6b66fd4a967af4 706 Pfam PF13328 HD domain 28 175 1.1E-52 T 21-04-2016 IPR003607 HD/PDEase domain VFU_RS02725 0b28ca467762dc8d6a6b66fd4a967af4 706 SUPERFAMILY SSF81271 376 448 4.91E-21 T 21-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VFU_RS02725 0b28ca467762dc8d6a6b66fd4a967af4 706 PANTHER PTHR21262 3 706 0.0 T 21-04-2016 VFU_RS02725 0b28ca467762dc8d6a6b66fd4a967af4 706 Gene3D G3DSA:3.10.20.30 388 448 6.8E-21 T 21-04-2016 IPR012675 Beta-grasp domain VFU_RS02725 0b28ca467762dc8d6a6b66fd4a967af4 706 SMART SM00471 41 153 5.2E-10 T 21-04-2016 IPR003607 HD/PDEase domain VFU_RS02725 0b28ca467762dc8d6a6b66fd4a967af4 706 SMART SM00954 235 345 2.3E-58 T 21-04-2016 IPR007685 RelA/SpoT GO:0015969 VFU_RS02725 0b28ca467762dc8d6a6b66fd4a967af4 706 Gene3D G3DSA:3.30.460.10 178 324 5.7E-46 T 21-04-2016 VFU_RS02725 0b28ca467762dc8d6a6b66fd4a967af4 706 Pfam PF02824 TGS domain 389 447 3.9E-20 T 21-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 VFU_RS02725 0b28ca467762dc8d6a6b66fd4a967af4 706 Pfam PF13291 ACT domain 627 703 9.3E-18 T 21-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 VFU_RS02725 0b28ca467762dc8d6a6b66fd4a967af4 706 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 27 703 2.7E-272 T 21-04-2016 IPR004811 RelA/SpoT family GO:0015969 VFU_RS02725 0b28ca467762dc8d6a6b66fd4a967af4 706 SUPERFAMILY SSF109604 3 190 1.29E-73 T 21-04-2016 VFU_RS02725 0b28ca467762dc8d6a6b66fd4a967af4 706 PANTHER PTHR21262:SF0 3 706 0.0 T 21-04-2016 VFU_RS12475 013bc1868f5446a8a3874ca36e482621 318 Pfam PF08448 PAS fold 21 136 2.1E-8 T 21-04-2016 IPR013656 PAS fold-4 VFU_RS12475 013bc1868f5446a8a3874ca36e482621 318 PANTHER PTHR10799 186 312 7.2E-21 T 21-04-2016 VFU_RS12475 013bc1868f5446a8a3874ca36e482621 318 PANTHER PTHR10799 108 144 7.2E-21 T 21-04-2016 VFU_RS12475 013bc1868f5446a8a3874ca36e482621 318 Gene3D G3DSA:3.30.70.270 155 318 7.7E-43 T 21-04-2016 VFU_RS12475 013bc1868f5446a8a3874ca36e482621 318 SUPERFAMILY SSF55785 15 95 1.83E-6 T 21-04-2016 IPR000014 PAS domain VFU_RS12475 013bc1868f5446a8a3874ca36e482621 318 SUPERFAMILY SSF55073 158 318 4.39E-41 T 21-04-2016 IPR029787 Nucleotide cyclase VFU_RS12475 013bc1868f5446a8a3874ca36e482621 318 Gene3D G3DSA:3.30.450.20 16 134 8.5E-9 T 21-04-2016 VFU_RS12475 013bc1868f5446a8a3874ca36e482621 318 Pfam PF00990 Diguanylate cyclase, GGDEF domain 154 313 3.8E-40 T 21-04-2016 IPR000160 GGDEF domain VFU_RS12475 013bc1868f5446a8a3874ca36e482621 318 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 149 315 1.4E-40 T 21-04-2016 IPR000160 GGDEF domain VFU_RS12475 013bc1868f5446a8a3874ca36e482621 318 PANTHER PTHR10799:SF750 186 312 7.2E-21 T 21-04-2016 VFU_RS12475 013bc1868f5446a8a3874ca36e482621 318 PANTHER PTHR10799:SF750 108 144 7.2E-21 T 21-04-2016 VFU_RS12475 013bc1868f5446a8a3874ca36e482621 318 SMART SM00267 142 318 5.1E-49 T 21-04-2016 IPR000160 GGDEF domain VFU_RS11445 6317e5148641a7eaaba2d7f4a10846ec 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 160 5.8E-48 T 21-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 VFU_RS11445 6317e5148641a7eaaba2d7f4a10846ec 164 SUPERFAMILY SSF50891 1 162 6.14E-58 T 21-04-2016 IPR029000 Cyclophilin-like domain VFU_RS11445 6317e5148641a7eaaba2d7f4a10846ec 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 21-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 VFU_RS11445 6317e5148641a7eaaba2d7f4a10846ec 164 Gene3D G3DSA:2.40.100.10 2 162 5.1E-53 T 21-04-2016 IPR029000 Cyclophilin-like domain VFU_RS11445 6317e5148641a7eaaba2d7f4a10846ec 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 7.7E-12 T 21-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 VFU_RS11445 6317e5148641a7eaaba2d7f4a10846ec 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 7.7E-12 T 21-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 VFU_RS11445 6317e5148641a7eaaba2d7f4a10846ec 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 7.7E-12 T 21-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 VFU_RS11445 6317e5148641a7eaaba2d7f4a10846ec 164 PANTHER PTHR11071 1 164 4.8E-78 T 21-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 VFU_RS11445 6317e5148641a7eaaba2d7f4a10846ec 164 PANTHER PTHR11071:SF192 1 164 4.8E-78 T 21-04-2016 VFU_RS11445 6317e5148641a7eaaba2d7f4a10846ec 164 PIRSF PIRSF001467 1 163 3.1E-28 T 21-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 VFU_RS05545 8431671a40aa9c02a960d3ce05ff7169 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 21-04-2016 IPR019776 Flagellar basal body rod protein, conserved site VFU_RS05545 8431671a40aa9c02a960d3ce05ff7169 262 PANTHER PTHR30435:SF19 1 262 1.4E-135 T 21-04-2016 VFU_RS05545 8431671a40aa9c02a960d3ce05ff7169 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 184 260 4.5E-24 T 21-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VFU_RS05545 8431671a40aa9c02a960d3ce05ff7169 262 SUPERFAMILY SSF117143 92 223 1.24E-34 T 21-04-2016 VFU_RS05545 8431671a40aa9c02a960d3ce05ff7169 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 261 4.0E-117 T 21-04-2016 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 VFU_RS05545 8431671a40aa9c02a960d3ce05ff7169 262 PANTHER PTHR30435 1 262 1.4E-135 T 21-04-2016 VFU_RS05545 8431671a40aa9c02a960d3ce05ff7169 262 Pfam PF00460 Flagella basal body rod protein 5 35 4.0E-12 T 21-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VFU_RS05545 8431671a40aa9c02a960d3ce05ff7169 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 137 3.5E-40 T 21-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G VFU_RS05545 8431671a40aa9c02a960d3ce05ff7169 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 149 244 4.0E-30 T 21-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G VFU_RS03520 505ecedeea984c81180de1af4b51817a 211 Pfam PF01625 Peptide methionine sulfoxide reductase 45 197 6.1E-66 T 21-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 VFU_RS03520 505ecedeea984c81180de1af4b51817a 211 PANTHER PTHR10173 1 201 1.3E-97 T 21-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 VFU_RS03520 505ecedeea984c81180de1af4b51817a 211 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 42 203 36.975 T 21-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 VFU_RS03520 505ecedeea984c81180de1af4b51817a 211 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 43 197 3.4E-67 T 21-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 VFU_RS03520 505ecedeea984c81180de1af4b51817a 211 PANTHER PTHR10173:SF36 1 201 1.3E-97 T 21-04-2016 VFU_RS03520 505ecedeea984c81180de1af4b51817a 211 SUPERFAMILY SSF55068 3 207 6.15E-79 T 21-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 VFU_RS03520 505ecedeea984c81180de1af4b51817a 211 Gene3D G3DSA:3.30.1060.10 4 197 8.6E-79 T 21-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 VFU_RS14830 7e38d8726b9181cb1cc5b5bd1049bd5f 187 SUPERFAMILY SSF143456 1 187 1.7E-67 T 21-04-2016 VFU_RS14830 7e38d8726b9181cb1cc5b5bd1049bd5f 187 Gene3D G3DSA:3.40.1740.10 131 178 1.0E-37 T 21-04-2016 VFU_RS14830 7e38d8726b9181cb1cc5b5bd1049bd5f 187 Gene3D G3DSA:3.40.1740.10 2 40 1.0E-37 T 21-04-2016 VFU_RS14830 7e38d8726b9181cb1cc5b5bd1049bd5f 187 PANTHER PTHR30327 1 187 9.7E-70 T 21-04-2016 VFU_RS14830 7e38d8726b9181cb1cc5b5bd1049bd5f 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 187 39.08 T 21-04-2016 IPR003774 Protein of unknown function UPF0301 VFU_RS14830 7e38d8726b9181cb1cc5b5bd1049bd5f 187 Gene3D G3DSA:3.30.70.1300 42 130 3.3E-29 T 21-04-2016 VFU_RS14830 7e38d8726b9181cb1cc5b5bd1049bd5f 187 PANTHER PTHR30327:SF1 1 187 9.7E-70 T 21-04-2016 VFU_RS14830 7e38d8726b9181cb1cc5b5bd1049bd5f 187 Pfam PF02622 Uncharacterized ACR, COG1678 12 174 7.3E-52 T 21-04-2016 IPR003774 Protein of unknown function UPF0301 VFU_RS06995 c9405b194d89b3fcce966a570b5d3e74 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 41 67 1.7E-29 T 21-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VFU_RS06995 c9405b194d89b3fcce966a570b5d3e74 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 12 28 1.7E-29 T 21-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VFU_RS06995 c9405b194d89b3fcce966a570b5d3e74 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 254 274 1.7E-29 T 21-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VFU_RS06995 c9405b194d89b3fcce966a570b5d3e74 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 232 252 1.7E-29 T 21-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VFU_RS06995 c9405b194d89b3fcce966a570b5d3e74 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 278 304 1.7E-29 T 21-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VFU_RS06995 c9405b194d89b3fcce966a570b5d3e74 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 121 144 1.7E-29 T 21-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VFU_RS06995 c9405b194d89b3fcce966a570b5d3e74 339 PANTHER PTHR30534:SF0 1 339 5.5E-73 T 21-04-2016 VFU_RS06995 c9405b194d89b3fcce966a570b5d3e74 339 Gene3D G3DSA:1.10.220.30 112 194 2.6E-25 T 21-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical VFU_RS06995 c9405b194d89b3fcce966a570b5d3e74 339 Gene3D G3DSA:1.10.220.30 13 78 4.9E-15 T 21-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical VFU_RS06995 c9405b194d89b3fcce966a570b5d3e74 339 SUPERFAMILY SSF48029 12 114 3.01E-18 T 21-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical VFU_RS06995 c9405b194d89b3fcce966a570b5d3e74 339 PANTHER PTHR30534 1 339 5.5E-73 T 21-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VFU_RS06995 c9405b194d89b3fcce966a570b5d3e74 339 Gene3D G3DSA:1.10.220.30 240 335 1.0E-25 T 21-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical VFU_RS06995 c9405b194d89b3fcce966a570b5d3e74 339 Pfam PF14841 FliG middle domain 123 194 7.4E-21 T 21-04-2016 IPR032779 Flagellar motor switch protein FliG, middle domain VFU_RS06995 c9405b194d89b3fcce966a570b5d3e74 339 Pfam PF01706 FliG C-terminal domain 224 330 8.2E-26 T 21-04-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal VFU_RS06995 c9405b194d89b3fcce966a570b5d3e74 339 SUPERFAMILY SSF48029 121 330 4.19E-55 T 21-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical VFU_RS06995 c9405b194d89b3fcce966a570b5d3e74 339 Pfam PF14842 FliG N-terminal domain 11 109 1.0E-22 T 21-04-2016 IPR028263 Flagellar motor switch protein FliG, N-terminal domain VFU_RS01445 91f299a40634ba88f2770d80146f792f 372 PANTHER PTHR34700:SF2 21 355 6.2E-78 T 21-04-2016 VFU_RS01445 91f299a40634ba88f2770d80146f792f 372 Gene3D G3DSA:3.10.350.10 41 90 3.7E-8 T 21-04-2016 IPR018392 LysM domain VFU_RS01445 91f299a40634ba88f2770d80146f792f 372 Pfam PF01476 LysM domain 44 89 2.2E-11 T 21-04-2016 IPR018392 LysM domain VFU_RS01445 91f299a40634ba88f2770d80146f792f 372 SMART SM00257 43 91 4.4E-7 T 21-04-2016 IPR018392 LysM domain VFU_RS01445 91f299a40634ba88f2770d80146f792f 372 PANTHER PTHR34700 21 355 6.2E-78 T 21-04-2016 VFU_RS01445 91f299a40634ba88f2770d80146f792f 372 SUPERFAMILY SSF54106 42 90 2.88E-7 T 21-04-2016 IPR018392 LysM domain VFU_RS10945 be81baaab1acff8b751ed9a7c35ed8b8 695 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 137 160 - T 21-04-2016 IPR025505 FHIPEP conserved site VFU_RS10945 be81baaab1acff8b751ed9a7c35ed8b8 695 PANTHER PTHR30161 9 695 3.4E-280 T 21-04-2016 VFU_RS10945 be81baaab1acff8b751ed9a7c35ed8b8 695 Pfam PF00771 FHIPEP family 21 685 6.1E-228 T 21-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VFU_RS10945 be81baaab1acff8b751ed9a7c35ed8b8 695 PANTHER PTHR30161:SF1 9 695 3.4E-280 T 21-04-2016 VFU_RS10945 be81baaab1acff8b751ed9a7c35ed8b8 695 PIRSF PIRSF005419 3 695 7.8E-217 T 21-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VFU_RS10945 be81baaab1acff8b751ed9a7c35ed8b8 695 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 65 84 6.6E-53 T 21-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VFU_RS10945 be81baaab1acff8b751ed9a7c35ed8b8 695 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 151 169 6.6E-53 T 21-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VFU_RS10945 be81baaab1acff8b751ed9a7c35ed8b8 695 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 181 198 6.6E-53 T 21-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VFU_RS10945 be81baaab1acff8b751ed9a7c35ed8b8 695 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 132 148 6.6E-53 T 21-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VFU_RS10945 be81baaab1acff8b751ed9a7c35ed8b8 695 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 28 41 6.6E-53 T 21-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VFU_RS10945 be81baaab1acff8b751ed9a7c35ed8b8 695 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 232 246 6.6E-53 T 21-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VFU_RS10585 cab4e673084551b5fcca2678e2645f2f 423 SUPERFAMILY SSF53383 19 420 2.25E-132 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VFU_RS10585 cab4e673084551b5fcca2678e2645f2f 423 Pfam PF00202 Aminotransferase class-III 17 419 2.2E-128 T 21-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VFU_RS10585 cab4e673084551b5fcca2678e2645f2f 423 Gene3D G3DSA:3.40.640.10 59 317 1.2E-84 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VFU_RS10585 cab4e673084551b5fcca2678e2645f2f 423 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 272 - T 21-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VFU_RS10585 cab4e673084551b5fcca2678e2645f2f 423 PANTHER PTHR11986 5 419 3.0E-185 T 21-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VFU_RS10585 cab4e673084551b5fcca2678e2645f2f 423 PANTHER PTHR11986:SF17 5 419 3.0E-185 T 21-04-2016 VFU_RS10585 cab4e673084551b5fcca2678e2645f2f 423 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 9 420 4.2E-178 T 21-04-2016 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 VFU_RS10585 cab4e673084551b5fcca2678e2645f2f 423 Gene3D G3DSA:3.90.1150.10 3 58 2.4E-38 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VFU_RS10585 cab4e673084551b5fcca2678e2645f2f 423 Gene3D G3DSA:3.90.1150.10 319 420 2.4E-38 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VFU_RS11605 53c23d4314a84711308a51c9733ed18b 414 PANTHER PTHR30489 1 414 7.1E-80 T 21-04-2016 VFU_RS11605 53c23d4314a84711308a51c9733ed18b 414 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 413 5.9E-156 T 21-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 VFU_RS11605 53c23d4314a84711308a51c9733ed18b 414 Pfam PF02687 FtsX-like permease family 274 407 1.3E-18 T 21-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 VFU_RS11605 53c23d4314a84711308a51c9733ed18b 414 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 4 414 9.2E-208 T 21-04-2016 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0006810|GO:0009276|GO:0016021 VFU_RS11605 53c23d4314a84711308a51c9733ed18b 414 Pfam PF12704 MacB-like periplasmic core domain 30 240 1.1E-12 T 21-04-2016 IPR025857 MacB-like periplasmic core domain VFU_RS09405 be9ab7bde9e9586bb0d18338f44dd99f 172 Pfam PF07977 FabA-like domain 29 158 1.6E-54 T 21-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 VFU_RS09405 be9ab7bde9e9586bb0d18338f44dd99f 172 SUPERFAMILY SSF54637 3 169 5.67E-57 T 21-04-2016 IPR029069 HotDog domain VFU_RS09405 be9ab7bde9e9586bb0d18338f44dd99f 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 51.668 T 21-04-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 VFU_RS09405 be9ab7bde9e9586bb0d18338f44dd99f 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 172 4.7E-93 T 21-04-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 VFU_RS09405 be9ab7bde9e9586bb0d18338f44dd99f 172 Gene3D G3DSA:3.10.129.10 2 169 4.1E-60 T 21-04-2016 IPR029069 HotDog domain VFU_RS05295 4deeeafb0d3f4bd8926788f722dfcdf7 169 PANTHER PTHR35089:SF1 2 168 6.2E-47 T 21-04-2016 VFU_RS05295 4deeeafb0d3f4bd8926788f722dfcdf7 169 SUPERFAMILY SSF111384 26 168 1.83E-30 T 21-04-2016 IPR024930 Skp domain VFU_RS05295 4deeeafb0d3f4bd8926788f722dfcdf7 169 Pfam PF03938 Outer membrane protein (OmpH-like) 13 167 1.0E-23 T 21-04-2016 IPR005632 Chaperone protein Skp GO:0051082 VFU_RS05295 4deeeafb0d3f4bd8926788f722dfcdf7 169 Gene3D G3DSA:3.30.910.20 17 64 1.4E-30 T 21-04-2016 VFU_RS05295 4deeeafb0d3f4bd8926788f722dfcdf7 169 Gene3D G3DSA:3.30.910.20 102 169 1.4E-30 T 21-04-2016 VFU_RS05295 4deeeafb0d3f4bd8926788f722dfcdf7 169 PANTHER PTHR35089 2 168 6.2E-47 T 21-04-2016 VFU_RS05295 4deeeafb0d3f4bd8926788f722dfcdf7 169 PIRSF PIRSF002094 1 169 2.3E-39 T 21-04-2016 IPR005632 Chaperone protein Skp GO:0051082 VFU_RS05295 4deeeafb0d3f4bd8926788f722dfcdf7 169 SMART SM00935 15 169 1.5E-40 T 21-04-2016 IPR005632 Chaperone protein Skp GO:0051082 VFU_RS06250 2d7d400aa30c897911e7c8db8edc4778 761 Pfam PF01627 Hpt domain 8 100 5.1E-18 T 21-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VFU_RS06250 2d7d400aa30c897911e7c8db8edc4778 761 PANTHER PTHR22617:SF6 184 754 6.9E-273 T 21-04-2016 VFU_RS06250 2d7d400aa30c897911e7c8db8edc4778 761 PANTHER PTHR22617:SF6 1 152 6.9E-273 T 21-04-2016 VFU_RS06250 2d7d400aa30c897911e7c8db8edc4778 761 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 372 431 3.0E-12 T 21-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 VFU_RS06250 2d7d400aa30c897911e7c8db8edc4778 761 SUPERFAMILY SSF47384 373 432 6.28E-14 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS06250 2d7d400aa30c897911e7c8db8edc4778 761 Pfam PF01584 CheW-like domain 625 754 4.1E-22 T 21-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VFU_RS06250 2d7d400aa30c897911e7c8db8edc4778 761 Gene3D G3DSA:1.20.120.160 4 127 9.4E-38 T 21-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VFU_RS06250 2d7d400aa30c897911e7c8db8edc4778 761 Gene3D G3DSA:2.40.50.180 643 707 4.6E-12 T 21-04-2016 VFU_RS06250 2d7d400aa30c897911e7c8db8edc4778 761 PANTHER PTHR22617 184 754 6.9E-273 T 21-04-2016 VFU_RS06250 2d7d400aa30c897911e7c8db8edc4778 761 PANTHER PTHR22617 1 152 6.9E-273 T 21-04-2016 VFU_RS06250 2d7d400aa30c897911e7c8db8edc4778 761 Gene3D G3DSA:2.30.30.40 708 752 2.3E-21 T 21-04-2016 VFU_RS06250 2d7d400aa30c897911e7c8db8edc4778 761 Gene3D G3DSA:2.30.30.40 619 640 2.3E-21 T 21-04-2016 VFU_RS06250 2d7d400aa30c897911e7c8db8edc4778 761 Gene3D G3DSA:3.30.565.10 434 618 5.4E-37 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS06250 2d7d400aa30c897911e7c8db8edc4778 761 SUPERFAMILY SSF50341 618 752 3.53E-29 T 21-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VFU_RS06250 2d7d400aa30c897911e7c8db8edc4778 761 SUPERFAMILY SSF55874 434 617 5.63E-39 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS06250 2d7d400aa30c897911e7c8db8edc4778 761 SMART SM00260 611 752 1.0E-34 T 21-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VFU_RS06250 2d7d400aa30c897911e7c8db8edc4778 761 SMART SM00073 6 103 2.7E-18 T 21-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VFU_RS06250 2d7d400aa30c897911e7c8db8edc4778 761 SMART SM01231 371 431 1.7E-17 T 21-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 VFU_RS06250 2d7d400aa30c897911e7c8db8edc4778 761 PRINTS PR00344 Bacterial sensor protein C-terminal signature 563 573 1.0E-11 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS06250 2d7d400aa30c897911e7c8db8edc4778 761 PRINTS PR00344 Bacterial sensor protein C-terminal signature 603 616 1.0E-11 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS06250 2d7d400aa30c897911e7c8db8edc4778 761 PRINTS PR00344 Bacterial sensor protein C-terminal signature 521 535 1.0E-11 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS06250 2d7d400aa30c897911e7c8db8edc4778 761 PRINTS PR00344 Bacterial sensor protein C-terminal signature 579 597 1.0E-11 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS06250 2d7d400aa30c897911e7c8db8edc4778 761 Gene3D G3DSA:1.10.287.560 372 432 9.0E-19 T 21-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 VFU_RS06250 2d7d400aa30c897911e7c8db8edc4778 761 SUPERFAMILY SSF47226 6 128 9.81E-32 T 21-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VFU_RS06250 2d7d400aa30c897911e7c8db8edc4778 761 SMART SM00387 476 619 6.3E-22 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS06250 2d7d400aa30c897911e7c8db8edc4778 761 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 479 618 3.1E-17 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS05520 136dc4f4ebb09ff9fba007308a275691 131 PANTHER PTHR30435 2 131 1.4E-43 T 21-04-2016 VFU_RS05520 136dc4f4ebb09ff9fba007308a275691 131 PIRSF PIRSF002889 1 131 6.4E-34 T 21-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 VFU_RS05520 136dc4f4ebb09ff9fba007308a275691 131 PANTHER PTHR30435:SF12 2 131 1.4E-43 T 21-04-2016 VFU_RS05520 136dc4f4ebb09ff9fba007308a275691 131 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 129 1.0E-28 T 21-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 VFU_RS05520 136dc4f4ebb09ff9fba007308a275691 131 Pfam PF00460 Flagella basal body rod protein 22 39 1.3E-4 T 21-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VFU_RS06270 9a729cd24bf6e0edccd5a3e7df380c9d 164 SMART SM00260 16 153 9.2E-50 T 21-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VFU_RS06270 9a729cd24bf6e0edccd5a3e7df380c9d 164 PANTHER PTHR22617:SF26 1 164 3.2E-112 T 21-04-2016 VFU_RS06270 9a729cd24bf6e0edccd5a3e7df380c9d 164 PANTHER PTHR22617 1 164 3.2E-112 T 21-04-2016 VFU_RS06270 9a729cd24bf6e0edccd5a3e7df380c9d 164 Pfam PF01584 CheW-like domain 20 156 4.2E-40 T 21-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VFU_RS06270 9a729cd24bf6e0edccd5a3e7df380c9d 164 Gene3D G3DSA:2.40.50.180 59 94 3.9E-9 T 21-04-2016 VFU_RS06270 9a729cd24bf6e0edccd5a3e7df380c9d 164 SUPERFAMILY SSF50341 14 158 1.02E-41 T 21-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VFU_RS06270 9a729cd24bf6e0edccd5a3e7df380c9d 164 Gene3D G3DSA:2.30.30.40 95 146 7.3E-9 T 21-04-2016 VFU_RS02900 30d405123819eac3fb2738fe96c5a61f 72 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 21-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS02900 30d405123819eac3fb2738fe96c5a61f 72 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 67 2.5E-35 T 21-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS02900 30d405123819eac3fb2738fe96c5a61f 72 PANTHER PTHR33280:SF2 1 66 2.5E-37 T 21-04-2016 VFU_RS02900 30d405123819eac3fb2738fe96c5a61f 72 Pfam PF01197 Ribosomal protein L31 1 66 2.6E-32 T 21-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS02900 30d405123819eac3fb2738fe96c5a61f 72 PANTHER PTHR33280 1 66 2.5E-37 T 21-04-2016 VFU_RS02900 30d405123819eac3fb2738fe96c5a61f 72 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 69 32.135 T 21-04-2016 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS02900 30d405123819eac3fb2738fe96c5a61f 72 PRINTS PR01249 Ribosomal protein L31 signature 32 47 1.9E-23 T 21-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS02900 30d405123819eac3fb2738fe96c5a61f 72 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.9E-23 T 21-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS02900 30d405123819eac3fb2738fe96c5a61f 72 PRINTS PR01249 Ribosomal protein L31 signature 47 65 1.9E-23 T 21-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS02900 30d405123819eac3fb2738fe96c5a61f 72 SUPERFAMILY SSF143800 1 68 7.85E-28 T 21-04-2016 VFU_RS14840 319218b4b857ff22c0d9c6f990c7884a 368 Pfam PF00437 Type II/IV secretion system protein 117 251 6.1E-36 T 21-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VFU_RS14840 319218b4b857ff22c0d9c6f990c7884a 368 Gene3D G3DSA:3.40.50.300 100 342 2.7E-62 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS14840 319218b4b857ff22c0d9c6f990c7884a 368 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 9.4E-126 T 21-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 VFU_RS14840 319218b4b857ff22c0d9c6f990c7884a 368 PANTHER PTHR30486 1 368 1.2E-159 T 21-04-2016 VFU_RS14840 319218b4b857ff22c0d9c6f990c7884a 368 PANTHER PTHR30486:SF3 1 368 1.2E-159 T 21-04-2016 VFU_RS14840 319218b4b857ff22c0d9c6f990c7884a 368 SUPERFAMILY SSF52540 5 334 1.11E-65 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS00840 17d9e07df2aba83971e112f73bdcbead 559 PANTHER PTHR32089 68 559 1.2E-208 T 21-04-2016 VFU_RS00840 17d9e07df2aba83971e112f73bdcbead 559 Pfam PF17200 Single Cache domain 2 51 194 1.0E-38 T 21-04-2016 IPR033480 Single Cache domain 2 VFU_RS00840 17d9e07df2aba83971e112f73bdcbead 559 PANTHER PTHR32089:SF55 68 559 1.2E-208 T 21-04-2016 VFU_RS00840 17d9e07df2aba83971e112f73bdcbead 559 SMART SM00283 301 558 1.2E-54 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VFU_RS00840 17d9e07df2aba83971e112f73bdcbead 559 Gene3D G3DSA:3.30.450.20 40 187 1.8E-47 T 21-04-2016 VFU_RS00840 17d9e07df2aba83971e112f73bdcbead 559 Pfam PF00672 HAMP domain 209 278 9.4E-15 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS00840 17d9e07df2aba83971e112f73bdcbead 559 SUPERFAMILY SSF58104 250 559 1.96E-73 T 21-04-2016 VFU_RS00840 17d9e07df2aba83971e112f73bdcbead 559 SMART SM01049 46 135 9.1E-33 T 21-04-2016 IPR033480 Single Cache domain 2 VFU_RS00840 17d9e07df2aba83971e112f73bdcbead 559 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 366 557 4.4E-43 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VFU_RS00840 17d9e07df2aba83971e112f73bdcbead 559 SMART SM00304 228 282 6.4E-10 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS00840 17d9e07df2aba83971e112f73bdcbead 559 Gene3D G3DSA:1.10.287.950 315 529 3.8E-55 T 21-04-2016 VFU_RS06895 080748cac5cf9bf6eca763139f596297 285 PANTHER PTHR30433 1 277 1.4E-102 T 21-04-2016 VFU_RS06895 080748cac5cf9bf6eca763139f596297 285 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 21-04-2016 IPR000540 Flagellar motor protein MotA, conserved site VFU_RS06895 080748cac5cf9bf6eca763139f596297 285 Pfam PF01618 MotA/TolQ/ExbB proton channel family 138 238 1.2E-8 T 21-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 VFU_RS06895 080748cac5cf9bf6eca763139f596297 285 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 281 5.6E-113 T 21-04-2016 IPR022522 Flagellar motor stator, MotA VFU_RS06895 080748cac5cf9bf6eca763139f596297 285 PANTHER PTHR30433:SF4 1 277 1.4E-102 T 21-04-2016 IPR022522 Flagellar motor stator, MotA VFU_RS08385 f4946b110c4424ffd9ef1e17a7256f40 402 PANTHER PTHR23502:SF39 17 390 1.3E-181 T 21-04-2016 VFU_RS08385 f4946b110c4424ffd9ef1e17a7256f40 402 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 17 396 2.5E-118 T 21-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 VFU_RS08385 f4946b110c4424ffd9ef1e17a7256f40 402 SUPERFAMILY SSF103473 8 400 2.35E-64 T 21-04-2016 IPR020846 Major facilitator superfamily domain VFU_RS08385 f4946b110c4424ffd9ef1e17a7256f40 402 Gene3D G3DSA:1.20.1250.20 224 398 3.8E-8 T 21-04-2016 VFU_RS08385 f4946b110c4424ffd9ef1e17a7256f40 402 Gene3D G3DSA:1.20.1250.20 21 202 2.2E-30 T 21-04-2016 VFU_RS08385 f4946b110c4424ffd9ef1e17a7256f40 402 Pfam PF07690 Major Facilitator Superfamily 26 365 5.2E-49 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VFU_RS08385 f4946b110c4424ffd9ef1e17a7256f40 402 PANTHER PTHR23502 17 390 1.3E-181 T 21-04-2016 VFU_RS08700 af339d696d97f00bceb98e65c9cdc3c3 417 PANTHER PTHR32195 11 417 9.1E-187 T 21-04-2016 VFU_RS08700 af339d696d97f00bceb98e65c9cdc3c3 417 Pfam PF03222 Tryptophan/tyrosine permease family 28 414 1.4E-15 T 21-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 VFU_RS08700 af339d696d97f00bceb98e65c9cdc3c3 417 PANTHER PTHR32195:SF19 11 417 9.1E-187 T 21-04-2016 VFU_RS04155 257df1170339c1004d66a414f50fd39c 433 PANTHER PTHR11902 1 428 2.3E-271 T 21-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS04155 257df1170339c1004d66a414f50fd39c 433 Gene3D G3DSA:3.30.390.10 3 126 2.2E-54 T 21-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VFU_RS04155 257df1170339c1004d66a414f50fd39c 433 Hamap MF_00318 Enolase [eno]. 2 417 44.349 T 21-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS04155 257df1170339c1004d66a414f50fd39c 433 PRINTS PR00148 Enolase signature 37 51 4.0E-44 T 21-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS04155 257df1170339c1004d66a414f50fd39c 433 PRINTS PR00148 Enolase signature 107 123 4.0E-44 T 21-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS04155 257df1170339c1004d66a414f50fd39c 433 PRINTS PR00148 Enolase signature 317 328 4.0E-44 T 21-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS04155 257df1170339c1004d66a414f50fd39c 433 PRINTS PR00148 Enolase signature 165 178 4.0E-44 T 21-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS04155 257df1170339c1004d66a414f50fd39c 433 PRINTS PR00148 Enolase signature 369 386 4.0E-44 T 21-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS04155 257df1170339c1004d66a414f50fd39c 433 PRINTS PR00148 Enolase signature 340 354 4.0E-44 T 21-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS04155 257df1170339c1004d66a414f50fd39c 433 PIRSF PIRSF001400 1 431 1.9E-191 T 21-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS04155 257df1170339c1004d66a414f50fd39c 433 Gene3D G3DSA:3.20.20.120 128 429 4.7E-136 T 21-04-2016 IPR029065 Enolase C-terminal domain-like VFU_RS04155 257df1170339c1004d66a414f50fd39c 433 SUPERFAMILY SSF51604 143 428 4.39E-126 T 21-04-2016 IPR029065 Enolase C-terminal domain-like VFU_RS04155 257df1170339c1004d66a414f50fd39c 433 Pfam PF03952 Enolase, N-terminal domain 4 134 5.8E-58 T 21-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VFU_RS04155 257df1170339c1004d66a414f50fd39c 433 SMART SM01192 143 431 3.6E-213 T 21-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VFU_RS04155 257df1170339c1004d66a414f50fd39c 433 SMART SM01193 4 134 9.5E-93 T 21-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VFU_RS04155 257df1170339c1004d66a414f50fd39c 433 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 429 2.4E-207 T 21-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS04155 257df1170339c1004d66a414f50fd39c 433 ProSitePatterns PS00164 Enolase signature. 340 353 - T 21-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS04155 257df1170339c1004d66a414f50fd39c 433 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 430 2.0E-137 T 21-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VFU_RS04155 257df1170339c1004d66a414f50fd39c 433 SUPERFAMILY SSF54826 3 138 5.4E-56 T 21-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VFU_RS15035 65a46e791019564b1fab6839c2f60894 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 21-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 VFU_RS15035 65a46e791019564b1fab6839c2f60894 323 Gene3D G3DSA:1.10.600.10 3 323 4.8E-101 T 21-04-2016 IPR008949 Isoprenoid synthase domain VFU_RS15035 65a46e791019564b1fab6839c2f60894 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 21-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 VFU_RS15035 65a46e791019564b1fab6839c2f60894 323 PANTHER PTHR12001 8 323 2.5E-125 T 21-04-2016 IPR017446 Polyprenyl synthetase-related VFU_RS15035 65a46e791019564b1fab6839c2f60894 323 SUPERFAMILY SSF48576 4 322 1.92E-100 T 21-04-2016 IPR008949 Isoprenoid synthase domain VFU_RS15035 65a46e791019564b1fab6839c2f60894 323 PANTHER PTHR12001:SF47 8 323 2.5E-125 T 21-04-2016 VFU_RS15035 65a46e791019564b1fab6839c2f60894 323 Pfam PF00348 Polyprenyl synthetase 32 273 6.5E-72 T 21-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 VFU_RS14875 9bc6c092907ea6e6ee1be08d8e672ed6 199 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 193 9.7E-66 T 21-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 VFU_RS14875 9bc6c092907ea6e6ee1be08d8e672ed6 199 PANTHER PTHR11067:SF9 1 196 4.0E-82 T 21-04-2016 VFU_RS14875 9bc6c092907ea6e6ee1be08d8e672ed6 199 Pfam PF01725 Ham1 family 4 192 7.9E-57 T 21-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 VFU_RS14875 9bc6c092907ea6e6ee1be08d8e672ed6 199 PANTHER PTHR11067 1 196 4.0E-82 T 21-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 VFU_RS14875 9bc6c092907ea6e6ee1be08d8e672ed6 199 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 2 196 51.876 T 21-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 VFU_RS14875 9bc6c092907ea6e6ee1be08d8e672ed6 199 SUPERFAMILY SSF52972 1 195 4.45E-75 T 21-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like VFU_RS14875 9bc6c092907ea6e6ee1be08d8e672ed6 199 Gene3D G3DSA:3.90.950.10 1 196 6.6E-83 T 21-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like VFU_RS03340 b9242c76682098ee6e7b27e9f2fcc46e 142 ProSitePatterns PS00358 Ribosomal protein L5 signature. 20 36 - T 21-04-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS03340 b9242c76682098ee6e7b27e9f2fcc46e 142 SUPERFAMILY SSF55282 1 142 2.83E-64 T 21-04-2016 IPR022803 Ribosomal protein L5 domain VFU_RS03340 b9242c76682098ee6e7b27e9f2fcc46e 142 Pfam PF00281 Ribosomal protein L5 1 43 4.3E-18 T 21-04-2016 IPR031310 Ribosomal protein L5, N-terminal VFU_RS03340 b9242c76682098ee6e7b27e9f2fcc46e 142 PIRSF PIRSF002161 1 142 2.0E-54 T 21-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 VFU_RS03340 b9242c76682098ee6e7b27e9f2fcc46e 142 Pfam PF00673 ribosomal L5P family C-terminus 47 140 8.8E-42 T 21-04-2016 IPR031309 Ribosomal protein L5, C-terminal VFU_RS03340 b9242c76682098ee6e7b27e9f2fcc46e 142 Gene3D G3DSA:3.30.1440.10 1 142 5.8E-65 T 21-04-2016 IPR022803 Ribosomal protein L5 domain VFU_RS03340 b9242c76682098ee6e7b27e9f2fcc46e 142 PANTHER PTHR11994 1 141 5.4E-82 T 21-04-2016 VFU_RS03340 b9242c76682098ee6e7b27e9f2fcc46e 142 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 142 32.772 T 21-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS06240 5074d15da8940c2b3f2071f5fb8e167f 122 Pfam PF00072 Response regulator receiver domain 3 115 1.3E-32 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS06240 5074d15da8940c2b3f2071f5fb8e167f 122 PANTHER PTHR26402 1 121 5.8E-43 T 21-04-2016 VFU_RS06240 5074d15da8940c2b3f2071f5fb8e167f 122 SMART SM00448 1 115 4.0E-35 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS06240 5074d15da8940c2b3f2071f5fb8e167f 122 SUPERFAMILY SSF52172 1 121 1.71E-37 T 21-04-2016 IPR011006 CheY-like superfamily VFU_RS06240 5074d15da8940c2b3f2071f5fb8e167f 122 Gene3D G3DSA:3.40.50.2300 1 121 2.5E-39 T 21-04-2016 VFU_RS02950 6c1acc6cc5fa4d2022937cacf418531f 115 PANTHER PTHR37950 2 115 1.7E-38 T 21-04-2016 VFU_RS02950 6c1acc6cc5fa4d2022937cacf418531f 115 Gene3D G3DSA:3.30.429.10 1 115 3.5E-39 T 21-04-2016 VFU_RS02950 6c1acc6cc5fa4d2022937cacf418531f 115 SUPERFAMILY SSF55331 2 115 9.3E-36 T 21-04-2016 IPR014347 Tautomerase/MIF superfamily VFU_RS02950 6c1acc6cc5fa4d2022937cacf418531f 115 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 90 1.9E-6 T 21-04-2016 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10|UniPathway: UPA00208 VFU_RS02950 6c1acc6cc5fa4d2022937cacf418531f 115 PANTHER PTHR37950:SF1 2 115 1.7E-38 T 21-04-2016 VFU_RS03585 569144fc9bcce1977ec47cea0bca1c22 447 Pfam PF01523 Putative modulator of DNA gyrase 32 324 3.5E-55 T 21-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VFU_RS03585 569144fc9bcce1977ec47cea0bca1c22 447 PANTHER PTHR30624 2 447 9.0E-189 T 21-04-2016 VFU_RS03585 569144fc9bcce1977ec47cea0bca1c22 447 PANTHER PTHR30624:SF1 2 447 9.0E-189 T 21-04-2016 VFU_RS03585 569144fc9bcce1977ec47cea0bca1c22 447 SUPERFAMILY SSF111283 13 447 4.05E-128 T 21-04-2016 VFU_RS02560 eb56bae477c8d34146cac012fe0cd7e1 291 Gene3D G3DSA:3.90.1280.10 225 281 6.8E-23 T 21-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 VFU_RS02560 eb56bae477c8d34146cac012fe0cd7e1 291 Gene3D G3DSA:3.55.30.10 3 175 1.7E-66 T 21-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 VFU_RS02560 eb56bae477c8d34146cac012fe0cd7e1 291 SUPERFAMILY SSF118352 223 281 2.49E-18 T 21-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 VFU_RS02560 eb56bae477c8d34146cac012fe0cd7e1 291 PANTHER PTHR30111:SF1 6 287 1.5E-78 T 21-04-2016 VFU_RS02560 eb56bae477c8d34146cac012fe0cd7e1 291 PIRSF PIRSF005261 1 284 3.5E-72 T 21-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 VFU_RS02560 eb56bae477c8d34146cac012fe0cd7e1 291 Gene3D G3DSA:1.10.287.480 176 224 4.8E-26 T 21-04-2016 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain VFU_RS02560 eb56bae477c8d34146cac012fe0cd7e1 291 Hamap MF_00117 33 kDa chaperonin [hslO]. 3 283 32.503 T 21-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 VFU_RS02560 eb56bae477c8d34146cac012fe0cd7e1 291 PANTHER PTHR30111 6 287 1.5E-78 T 21-04-2016 VFU_RS02560 eb56bae477c8d34146cac012fe0cd7e1 291 Pfam PF01430 Hsp33 protein 5 272 5.0E-82 T 21-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 VFU_RS02560 eb56bae477c8d34146cac012fe0cd7e1 291 SUPERFAMILY SSF64397 4 231 8.11E-78 T 21-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 VFU_RS12825 addc398457a4cb0a78964248dfda15fa 291 SMART SM00116 76 125 0.051 T 21-04-2016 IPR000644 CBS domain VFU_RS12825 addc398457a4cb0a78964248dfda15fa 291 SMART SM00116 139 187 0.028 T 21-04-2016 IPR000644 CBS domain VFU_RS12825 addc398457a4cb0a78964248dfda15fa 291 SMART SM01091 203 281 1.1E-30 T 21-04-2016 IPR005170 Transporter-associated domain VFU_RS12825 addc398457a4cb0a78964248dfda15fa 291 Gene3D G3DSA:3.10.580.10 53 195 2.2E-25 T 21-04-2016 VFU_RS12825 addc398457a4cb0a78964248dfda15fa 291 SUPERFAMILY SSF54631 57 198 1.83E-33 T 21-04-2016 VFU_RS12825 addc398457a4cb0a78964248dfda15fa 291 PANTHER PTHR22777 20 291 5.7E-115 T 21-04-2016 VFU_RS12825 addc398457a4cb0a78964248dfda15fa 291 SUPERFAMILY SSF56176 198 280 7.63E-23 T 21-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 VFU_RS12825 addc398457a4cb0a78964248dfda15fa 291 PANTHER PTHR22777:SF17 20 291 5.7E-115 T 21-04-2016 VFU_RS12825 addc398457a4cb0a78964248dfda15fa 291 Pfam PF03471 Transporter associated domain 204 279 9.1E-23 T 21-04-2016 IPR005170 Transporter-associated domain VFU_RS12825 addc398457a4cb0a78964248dfda15fa 291 Pfam PF00571 CBS domain 137 187 1.4E-6 T 21-04-2016 IPR000644 CBS domain VFU_RS12825 addc398457a4cb0a78964248dfda15fa 291 Pfam PF00571 CBS domain 67 124 7.8E-8 T 21-04-2016 IPR000644 CBS domain VFU_RS12825 addc398457a4cb0a78964248dfda15fa 291 Gene3D G3DSA:3.30.465.10 196 281 3.3E-30 T 21-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 VFU_RS10190 0fdb8e4ebb1bc516f8a5fc1c82187afe 688 Pfam PF08532 Beta-galactosidase trimerisation domain 402 617 1.4E-64 T 21-04-2016 IPR013738 Beta-galactosidase trimerisation GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VFU_RS10190 0fdb8e4ebb1bc516f8a5fc1c82187afe 688 Gene3D G3DSA:3.40.50.880 400 620 1.2E-56 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like VFU_RS10190 0fdb8e4ebb1bc516f8a5fc1c82187afe 688 PANTHER PTHR36447:SF1 1 688 1.2E-231 T 21-04-2016 VFU_RS10190 0fdb8e4ebb1bc516f8a5fc1c82187afe 688 PANTHER PTHR36447 1 688 1.2E-231 T 21-04-2016 VFU_RS10190 0fdb8e4ebb1bc516f8a5fc1c82187afe 688 Pfam PF02449 Beta-galactosidase 19 390 4.7E-148 T 21-04-2016 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VFU_RS10190 0fdb8e4ebb1bc516f8a5fc1c82187afe 688 PIRSF PIRSF001084 7 687 4.6E-230 T 21-04-2016 IPR003476 Glycoside hydrolase, family 42 GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VFU_RS10190 0fdb8e4ebb1bc516f8a5fc1c82187afe 688 SUPERFAMILY SSF51445 14 371 9.64E-110 T 21-04-2016 IPR017853 Glycoside hydrolase superfamily VFU_RS10190 0fdb8e4ebb1bc516f8a5fc1c82187afe 688 SUPERFAMILY SSF52317 400 618 2.9E-57 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like VFU_RS10190 0fdb8e4ebb1bc516f8a5fc1c82187afe 688 Gene3D G3DSA:3.20.20.80 16 395 1.1E-123 T 21-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VFU_RS11275 41059faa37de11bd920edb7c380eaa81 373 SUPERFAMILY SSF53187 2 186 1.14E-42 T 21-04-2016 VFU_RS11275 41059faa37de11bd920edb7c380eaa81 373 SUPERFAMILY SSF53187 298 373 1.14E-42 T 21-04-2016 VFU_RS11275 41059faa37de11bd920edb7c380eaa81 373 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 72 81 - T 21-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VFU_RS11275 41059faa37de11bd920edb7c380eaa81 373 Pfam PF01546 Peptidase family M20/M25/M40 73 370 3.0E-24 T 21-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 VFU_RS11275 41059faa37de11bd920edb7c380eaa81 373 PANTHER PTHR11014 6 373 1.6E-81 T 21-04-2016 VFU_RS11275 41059faa37de11bd920edb7c380eaa81 373 Gene3D G3DSA:3.40.630.10 2 177 1.4E-40 T 21-04-2016 VFU_RS11275 41059faa37de11bd920edb7c380eaa81 373 Gene3D G3DSA:3.40.630.10 287 373 1.4E-40 T 21-04-2016 VFU_RS11275 41059faa37de11bd920edb7c380eaa81 373 Gene3D G3DSA:3.30.70.360 178 281 1.8E-28 T 21-04-2016 IPR011650 Peptidase M20, dimerisation domain VFU_RS11275 41059faa37de11bd920edb7c380eaa81 373 PIRSF PIRSF037238 1 373 1.5E-147 T 21-04-2016 IPR017150 Peptidase M20, glutamate carboxypeptidase VFU_RS11275 41059faa37de11bd920edb7c380eaa81 373 SUPERFAMILY SSF55031 177 284 5.63E-25 T 21-04-2016 IPR011650 Peptidase M20, dimerisation domain VFU_RS11275 41059faa37de11bd920edb7c380eaa81 373 PANTHER PTHR11014:SF64 6 373 1.6E-81 T 21-04-2016 VFU_RS11275 41059faa37de11bd920edb7c380eaa81 373 Pfam PF07687 Peptidase dimerisation domain 175 271 1.1E-22 T 21-04-2016 IPR011650 Peptidase M20, dimerisation domain VFU_RS11765 9b066afccf7cd5ce80f24afb8067b0ef 98 Gene3D G3DSA:1.10.150.280 23 98 6.9E-19 T 21-04-2016 VFU_RS11765 9b066afccf7cd5ce80f24afb8067b0ef 98 SMART SM00278 46 65 7.0 T 21-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VFU_RS11765 9b066afccf7cd5ce80f24afb8067b0ef 98 SMART SM00278 76 95 140.0 T 21-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VFU_RS11765 9b066afccf7cd5ce80f24afb8067b0ef 98 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 30 98 8.7E-25 T 21-04-2016 IPR004509 Competence protein ComEA, helix-hairpin-helix domain VFU_RS11765 9b066afccf7cd5ce80f24afb8067b0ef 98 SUPERFAMILY SSF47781 27 98 5.67E-26 T 21-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 VFU_RS11765 9b066afccf7cd5ce80f24afb8067b0ef 98 Pfam PF12836 Helix-hairpin-helix motif 35 96 6.3E-21 T 21-04-2016 VFU_RS11765 9b066afccf7cd5ce80f24afb8067b0ef 98 PANTHER PTHR21180 23 96 3.1E-23 T 21-04-2016 VFU_RS22705 f0e00b3225fa2de50cc8f08edf154bbb 123 PANTHER PTHR11778:SF0 1 123 3.2E-72 T 21-04-2016 VFU_RS22705 f0e00b3225fa2de50cc8f08edf154bbb 123 PANTHER PTHR11778 1 123 3.2E-72 T 21-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VFU_RS22705 f0e00b3225fa2de50cc8f08edf154bbb 123 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 4 119 2.0E-14 T 21-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VFU_RS22705 f0e00b3225fa2de50cc8f08edf154bbb 123 Gene3D G3DSA:3.30.930.10 1 123 5.0E-54 T 21-04-2016 VFU_RS22705 f0e00b3225fa2de50cc8f08edf154bbb 123 PRINTS PR00981 Seryl-tRNA synthetase signature 70 86 7.2E-20 T 21-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VFU_RS22705 f0e00b3225fa2de50cc8f08edf154bbb 123 PRINTS PR00981 Seryl-tRNA synthetase signature 35 48 7.2E-20 T 21-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VFU_RS22705 f0e00b3225fa2de50cc8f08edf154bbb 123 PRINTS PR00981 Seryl-tRNA synthetase signature 52 68 7.2E-20 T 21-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VFU_RS22705 f0e00b3225fa2de50cc8f08edf154bbb 123 SUPERFAMILY SSF55681 2 122 4.26E-37 T 21-04-2016 VFU_RS10955 a13aa7727126162762a7f68723e49220 139 Pfam PF05130 FlgN protein 19 134 6.7E-8 T 21-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 VFU_RS10955 a13aa7727126162762a7f68723e49220 139 Gene3D G3DSA:1.20.58.300 18 134 1.7E-6 T 21-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 VFU_RS10955 a13aa7727126162762a7f68723e49220 139 SUPERFAMILY SSF140566 18 133 8.37E-9 T 21-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 VFU_RS01155 d78c96a26aa6faa6e4efe57727309c4c 305 PANTHER PTHR22911 2 305 5.5E-151 T 21-04-2016 VFU_RS01155 d78c96a26aa6faa6e4efe57727309c4c 305 TIGRFAM TIGR00688 rarD: protein RarD 10 264 2.3E-84 T 21-04-2016 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 VFU_RS01155 d78c96a26aa6faa6e4efe57727309c4c 305 SUPERFAMILY SSF103481 48 145 9.02E-13 T 21-04-2016 VFU_RS01155 d78c96a26aa6faa6e4efe57727309c4c 305 Pfam PF00892 EamA-like transporter family 11 145 4.2E-15 T 21-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VFU_RS01155 d78c96a26aa6faa6e4efe57727309c4c 305 SUPERFAMILY SSF103481 192 290 1.96E-7 T 21-04-2016 VFU_RS01155 d78c96a26aa6faa6e4efe57727309c4c 305 PANTHER PTHR22911:SF41 2 305 5.5E-151 T 21-04-2016 VFU_RS03580 1b6a5f8648a94fa2a0f4ea775a2ee39d 175 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 8 172 23.264 T 21-04-2016 IPR006839 Ribosome-associated, YjgA VFU_RS03580 1b6a5f8648a94fa2a0f4ea775a2ee39d 175 Pfam PF04751 Protein of unknown function (DUF615) 18 168 7.5E-55 T 21-04-2016 IPR006839 Ribosome-associated, YjgA VFU_RS03580 1b6a5f8648a94fa2a0f4ea775a2ee39d 175 PANTHER PTHR38101:SF1 1 174 6.8E-76 T 21-04-2016 VFU_RS03580 1b6a5f8648a94fa2a0f4ea775a2ee39d 175 PIRSF PIRSF016183 1 174 5.9E-71 T 21-04-2016 IPR006839 Ribosome-associated, YjgA VFU_RS03580 1b6a5f8648a94fa2a0f4ea775a2ee39d 175 SUPERFAMILY SSF158710 30 170 9.42E-52 T 21-04-2016 VFU_RS03580 1b6a5f8648a94fa2a0f4ea775a2ee39d 175 Gene3D G3DSA:1.10.60.30 104 172 1.9E-28 T 21-04-2016 IPR023153 PSPTO4464-like domain VFU_RS03580 1b6a5f8648a94fa2a0f4ea775a2ee39d 175 PANTHER PTHR38101 1 174 6.8E-76 T 21-04-2016 VFU_RS03580 1b6a5f8648a94fa2a0f4ea775a2ee39d 175 Gene3D G3DSA:1.10.60.30 31 102 6.4E-33 T 21-04-2016 IPR023153 PSPTO4464-like domain VFU_RS06540 e5b1a68bf2443a46eed421c5299f7ef0 321 Pfam PF13177 DNA polymerase III, delta subunit 10 165 5.0E-49 T 21-04-2016 VFU_RS06540 e5b1a68bf2443a46eed421c5299f7ef0 321 PANTHER PTHR11669 10 318 1.5E-54 T 21-04-2016 VFU_RS06540 e5b1a68bf2443a46eed421c5299f7ef0 321 Gene3D G3DSA:3.40.50.300 6 165 2.1E-52 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS06540 e5b1a68bf2443a46eed421c5299f7ef0 321 SUPERFAMILY SSF52540 5 183 2.54E-41 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS06540 e5b1a68bf2443a46eed421c5299f7ef0 321 PANTHER PTHR11669:SF8 10 318 1.5E-54 T 21-04-2016 VFU_RS06540 e5b1a68bf2443a46eed421c5299f7ef0 321 SUPERFAMILY SSF48019 208 320 3.57E-17 T 21-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 VFU_RS06540 e5b1a68bf2443a46eed421c5299f7ef0 321 Gene3D G3DSA:1.20.272.10 207 320 1.9E-29 T 21-04-2016 VFU_RS06540 e5b1a68bf2443a46eed421c5299f7ef0 321 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 12 196 9.2E-62 T 21-04-2016 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS06540 e5b1a68bf2443a46eed421c5299f7ef0 321 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 206 316 1.2E-22 T 21-04-2016 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS02945 8aab47ea0c4551cf394ff9d16773cd5b 256 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 241 1.5E-76 T 21-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 VFU_RS02945 8aab47ea0c4551cf394ff9d16773cd5b 256 SUPERFAMILY SSF51351 2 250 2.88E-89 T 21-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 VFU_RS02945 8aab47ea0c4551cf394ff9d16773cd5b 256 ProSitePatterns PS00171 Triosephosphate isomerase active site. 167 177 - T 21-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 VFU_RS02945 8aab47ea0c4551cf394ff9d16773cd5b 256 PANTHER PTHR21139 1 256 2.0E-122 T 21-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 VFU_RS02945 8aab47ea0c4551cf394ff9d16773cd5b 256 Pfam PF00121 Triosephosphate isomerase 5 247 7.8E-87 T 21-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 VFU_RS02945 8aab47ea0c4551cf394ff9d16773cd5b 256 Gene3D G3DSA:3.20.20.70 1 253 9.4E-99 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS02945 8aab47ea0c4551cf394ff9d16773cd5b 256 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 251 39.515 T 21-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 VFU_RS05260 ccab01d2e80fa74abe7d995a1c90163e 243 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 44.054 T 21-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 VFU_RS05260 ccab01d2e80fa74abe7d995a1c90163e 243 PANTHER PTHR21499 4 240 6.6E-113 T 21-04-2016 VFU_RS05260 ccab01d2e80fa74abe7d995a1c90163e 243 PANTHER PTHR21499:SF23 4 240 6.6E-113 T 21-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 VFU_RS05260 ccab01d2e80fa74abe7d995a1c90163e 243 SUPERFAMILY SSF53633 7 240 1.06E-71 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VFU_RS05260 ccab01d2e80fa74abe7d995a1c90163e 243 PIRSF PIRSF005650 4 243 4.6E-89 T 21-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 VFU_RS05260 ccab01d2e80fa74abe7d995a1c90163e 243 Pfam PF00696 Amino acid kinase family 11 219 2.2E-26 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VFU_RS05260 ccab01d2e80fa74abe7d995a1c90163e 243 Gene3D G3DSA:3.40.1160.10 2 240 1.5E-86 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VFU_RS05260 ccab01d2e80fa74abe7d995a1c90163e 243 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 1.9E-102 T 21-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 VFU_RS05075 747a18e7dc337caf444bd6db38eb5ccf 407 SUPERFAMILY SSF63380 105 272 5.96E-35 T 21-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 VFU_RS05075 747a18e7dc337caf444bd6db38eb5ccf 407 Pfam PF00970 Oxidoreductase FAD-binding domain 204 266 1.3E-8 T 21-04-2016 IPR008333 Oxidoreductase, FAD-binding domain VFU_RS05075 747a18e7dc337caf444bd6db38eb5ccf 407 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 1 407 63.12 T 21-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 VFU_RS05075 747a18e7dc337caf444bd6db38eb5ccf 407 Gene3D G3DSA:2.40.30.10 124 264 6.0E-61 T 21-04-2016 VFU_RS05075 747a18e7dc337caf444bd6db38eb5ccf 407 Gene3D G3DSA:3.40.50.80 269 406 4.7E-42 T 21-04-2016 VFU_RS05075 747a18e7dc337caf444bd6db38eb5ccf 407 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 40 115 1.5E-10 T 21-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VFU_RS05075 747a18e7dc337caf444bd6db38eb5ccf 407 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 3 407 2.4E-227 T 21-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 VFU_RS05075 747a18e7dc337caf444bd6db38eb5ccf 407 Gene3D G3DSA:3.10.20.30 34 123 3.2E-20 T 21-04-2016 IPR012675 Beta-grasp domain VFU_RS05075 747a18e7dc337caf444bd6db38eb5ccf 407 PIRSF PIRSF000044 1 407 2.7E-219 T 21-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 VFU_RS05075 747a18e7dc337caf444bd6db38eb5ccf 407 Pfam PF00175 Oxidoreductase NAD-binding domain 277 385 1.2E-17 T 21-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VFU_RS05075 747a18e7dc337caf444bd6db38eb5ccf 407 SUPERFAMILY SSF52343 258 402 8.38E-37 T 21-04-2016 VFU_RS05075 747a18e7dc337caf444bd6db38eb5ccf 407 PANTHER PTHR19370:SF32 62 176 4.5E-143 T 21-04-2016 VFU_RS05075 747a18e7dc337caf444bd6db38eb5ccf 407 PANTHER PTHR19370:SF32 205 407 4.5E-143 T 21-04-2016 VFU_RS05075 747a18e7dc337caf444bd6db38eb5ccf 407 PANTHER PTHR19370 62 176 4.5E-143 T 21-04-2016 VFU_RS05075 747a18e7dc337caf444bd6db38eb5ccf 407 PANTHER PTHR19370 205 407 4.5E-143 T 21-04-2016 VFU_RS05075 747a18e7dc337caf444bd6db38eb5ccf 407 SUPERFAMILY SSF54292 37 124 1.04E-20 T 21-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VFU_RS15145 9ce8788fec67faf3774233341a3caa78 185 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site VFU_RS15145 9ce8788fec67faf3774233341a3caa78 185 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 26 5.8E-4 T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site VFU_RS08175 234dc18c00ac63dfad15a7f81570ac66 358 PANTHER PTHR30469:SF10 6 358 6.2E-116 T 21-04-2016 VFU_RS08175 234dc18c00ac63dfad15a7f81570ac66 358 PANTHER PTHR30469 6 358 6.2E-116 T 21-04-2016 VFU_RS08175 234dc18c00ac63dfad15a7f81570ac66 358 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 351 1.8E-67 T 21-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 VFU_RS08175 234dc18c00ac63dfad15a7f81570ac66 358 Pfam PF13533 Biotin-lipoyl like 60 101 2.2E-13 T 21-04-2016 VFU_RS08175 234dc18c00ac63dfad15a7f81570ac66 358 Pfam PF13437 HlyD family secretion protein 153 251 5.2E-9 T 21-04-2016 VFU_RS08175 234dc18c00ac63dfad15a7f81570ac66 358 Gene3D G3DSA:2.40.50.100 59 89 1.4E-19 T 21-04-2016 VFU_RS08175 234dc18c00ac63dfad15a7f81570ac66 358 Gene3D G3DSA:2.40.50.100 150 181 1.4E-19 T 21-04-2016 VFU_RS08175 234dc18c00ac63dfad15a7f81570ac66 358 SUPERFAMILY SSF111369 48 266 9.55E-30 T 21-04-2016 VFU_RS05480 d29d8592f30af83268fbf712052988f6 377 Pfam PF16539 Flagellar assembly protein T, middle domain 114 256 1.9E-41 T 21-04-2016 IPR032386 Flagellar assembly protein T, middle domain VFU_RS05480 d29d8592f30af83268fbf712052988f6 377 Pfam PF16538 Flagellar assembly protein T, C-terminal domain 299 375 1.1E-26 T 21-04-2016 IPR032388 Flagellar assembly protein T, C-terminal VFU_RS05480 d29d8592f30af83268fbf712052988f6 377 Pfam PF16548 Flagellar assembly protein T, N-terminal domain 24 110 1.0E-25 T 21-04-2016 IPR032370 Flagellar assembly protein T, N-terminal VFU_RS05170 ed3928649b8a8f56fcbeb12b63d94808 154 SUPERFAMILY SSF53271 4 141 5.11E-31 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like VFU_RS05170 ed3928649b8a8f56fcbeb12b63d94808 154 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 153 39.604 T 21-04-2016 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22|UniPathway: UPA00602 VFU_RS05170 ed3928649b8a8f56fcbeb12b63d94808 154 Gene3D G3DSA:3.40.50.2020 1 145 7.7E-43 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like VFU_RS05170 ed3928649b8a8f56fcbeb12b63d94808 154 PANTHER PTHR39563 2 152 7.3E-113 T 21-04-2016 VFU_RS05170 ed3928649b8a8f56fcbeb12b63d94808 154 Pfam PF00156 Phosphoribosyl transferase domain 28 143 3.9E-17 T 21-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 VFU_RS13725 ce9354d2f36b574fbaea46638241b171 403 SUPERFAMILY SSF53383 3 400 5.78E-125 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VFU_RS13725 ce9354d2f36b574fbaea46638241b171 403 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 4 403 6.2E-155 T 21-04-2016 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 VFU_RS13725 ce9354d2f36b574fbaea46638241b171 403 PANTHER PTHR11601 7 403 2.5E-179 T 21-04-2016 VFU_RS13725 ce9354d2f36b574fbaea46638241b171 403 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 6 401 3.2E-166 T 21-04-2016 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 VFU_RS13725 ce9354d2f36b574fbaea46638241b171 403 Gene3D G3DSA:3.90.1150.10 283 398 2.6E-25 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VFU_RS13725 ce9354d2f36b574fbaea46638241b171 403 PANTHER PTHR11601:SF17 7 403 2.5E-179 T 21-04-2016 VFU_RS13725 ce9354d2f36b574fbaea46638241b171 403 Gene3D G3DSA:3.40.640.10 35 282 1.0E-83 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VFU_RS13725 ce9354d2f36b574fbaea46638241b171 403 PIRSF PIRSF005572 21 402 2.4E-55 T 21-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 VFU_RS13725 ce9354d2f36b574fbaea46638241b171 403 Pfam PF00266 Aminotransferase class-V 24 392 3.4E-150 T 21-04-2016 IPR000192 Aminotransferase class V domain VFU_RS01775 a909fcd6bbd97c2a817942ce1a3b8a03 84 PRINTS PR00124 ATP synthase C subunit signature 11 30 1.7E-6 T 21-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 VFU_RS01775 a909fcd6bbd97c2a817942ce1a3b8a03 84 PRINTS PR00124 ATP synthase C subunit signature 49 74 1.7E-6 T 21-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 VFU_RS01775 a909fcd6bbd97c2a817942ce1a3b8a03 84 PRINTS PR00124 ATP synthase C subunit signature 32 47 1.7E-6 T 21-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 VFU_RS01775 a909fcd6bbd97c2a817942ce1a3b8a03 84 Gene3D G3DSA:1.20.20.10 2 78 1.8E-32 T 21-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 VFU_RS01775 a909fcd6bbd97c2a817942ce1a3b8a03 84 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 21-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site VFU_RS01775 a909fcd6bbd97c2a817942ce1a3b8a03 84 Pfam PF00137 ATP synthase subunit C 10 72 1.0E-10 T 21-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 VFU_RS01775 a909fcd6bbd97c2a817942ce1a3b8a03 84 PANTHER PTHR10031 8 77 1.8E-20 T 21-04-2016 VFU_RS01775 a909fcd6bbd97c2a817942ce1a3b8a03 84 Hamap MF_01396 ATP synthase subunit c [atpH]. 8 76 14.624 T 21-04-2016 VFU_RS01775 a909fcd6bbd97c2a817942ce1a3b8a03 84 SUPERFAMILY SSF81333 3 78 1.7E-19 T 21-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 VFU_RS01775 a909fcd6bbd97c2a817942ce1a3b8a03 84 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 19 76 1.2E-30 T 21-04-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 VFU_RS01025 e9e59d9e02121dc786392a0ff03c2365 148 SUPERFAMILY SSF46955 3 111 4.76E-27 T 21-04-2016 IPR009061 Putative DNA-binding domain VFU_RS01025 e9e59d9e02121dc786392a0ff03c2365 148 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.8E-9 T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VFU_RS01025 e9e59d9e02121dc786392a0ff03c2365 148 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.8E-9 T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VFU_RS01025 e9e59d9e02121dc786392a0ff03c2365 148 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.8E-9 T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VFU_RS01025 e9e59d9e02121dc786392a0ff03c2365 148 Gene3D G3DSA:1.10.1660.10 56 134 4.8E-19 T 21-04-2016 VFU_RS01025 e9e59d9e02121dc786392a0ff03c2365 148 PANTHER PTHR30204 5 99 6.5E-21 T 21-04-2016 VFU_RS01025 e9e59d9e02121dc786392a0ff03c2365 148 Gene3D G3DSA:1.10.1660.10 3 55 1.1E-20 T 21-04-2016 VFU_RS01025 e9e59d9e02121dc786392a0ff03c2365 148 PANTHER PTHR30204:SF18 5 99 6.5E-21 T 21-04-2016 VFU_RS01025 e9e59d9e02121dc786392a0ff03c2365 148 Pfam PF13411 MerR HTH family regulatory protein 4 68 2.1E-14 T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VFU_RS01025 e9e59d9e02121dc786392a0ff03c2365 148 SMART SM00422 1 70 6.8E-15 T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VFU_RS02125 8d8f928727debd6703f16679fc8c7eed 544 Pfam PF03109 ABC1 family 112 230 1.4E-35 T 21-04-2016 IPR004147 UbiB domain VFU_RS02125 8d8f928727debd6703f16679fc8c7eed 544 SUPERFAMILY SSF56112 94 158 7.53E-47 T 21-04-2016 IPR011009 Protein kinase-like domain VFU_RS02125 8d8f928727debd6703f16679fc8c7eed 544 SUPERFAMILY SSF56112 193 436 7.53E-47 T 21-04-2016 IPR011009 Protein kinase-like domain VFU_RS02125 8d8f928727debd6703f16679fc8c7eed 544 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 539 56.961 T 21-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 VFU_RS02125 8d8f928727debd6703f16679fc8c7eed 544 PANTHER PTHR10566:SF79 1 458 6.9E-291 T 21-04-2016 VFU_RS02125 8d8f928727debd6703f16679fc8c7eed 544 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 445 3.9E-178 T 21-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 VFU_RS02125 8d8f928727debd6703f16679fc8c7eed 544 PANTHER PTHR10566 1 458 6.9E-291 T 21-04-2016 VFU_RS06920 09c0ba72d2aa6ed6a8c9491689bef990 128 Gene3D G3DSA:1.20.120.340 8 125 3.6E-36 T 21-04-2016 IPR003713 Flagellar protein FliS GO:0044780 VFU_RS06920 09c0ba72d2aa6ed6a8c9491689bef990 128 SUPERFAMILY SSF101116 9 125 3.27E-34 T 21-04-2016 IPR003713 Flagellar protein FliS GO:0044780 VFU_RS06920 09c0ba72d2aa6ed6a8c9491689bef990 128 Pfam PF02561 Flagellar protein FliS 7 122 3.2E-33 T 21-04-2016 IPR003713 Flagellar protein FliS GO:0044780 VFU_RS06920 09c0ba72d2aa6ed6a8c9491689bef990 128 PANTHER PTHR34773 1 121 1.5E-35 T 21-04-2016 VFU_RS06920 09c0ba72d2aa6ed6a8c9491689bef990 128 PIRSF PIRSF039090 1 128 6.5E-39 T 21-04-2016 IPR003713 Flagellar protein FliS GO:0044780 VFU_RS06920 09c0ba72d2aa6ed6a8c9491689bef990 128 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 123 2.9E-25 T 21-04-2016 IPR003713 Flagellar protein FliS GO:0044780 VFU_RS12185 169ef7add9a0c843e4375a031548abf3 373 Pfam PF10758 Protein of unknown function (DUF2586) 4 364 4.8E-160 T 21-04-2016 IPR019694 Bacteriophage HP1, Orf23 VFU_RS15245 d9d61188e1521c782b3f1a8f285e70b4 448 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 6 448 4.5E-123 T 21-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VFU_RS15245 d9d61188e1521c782b3f1a8f285e70b4 448 Pfam PF00696 Amino acid kinase family 6 278 9.7E-49 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VFU_RS15245 d9d61188e1521c782b3f1a8f285e70b4 448 PIRSF PIRSF000726 2 448 1.4E-125 T 21-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VFU_RS15245 d9d61188e1521c782b3f1a8f285e70b4 448 SUPERFAMILY SSF55021 378 447 1.37E-11 T 21-04-2016 VFU_RS15245 d9d61188e1521c782b3f1a8f285e70b4 448 ProSitePatterns PS00324 Aspartokinase signature. 6 14 - T 21-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VFU_RS15245 d9d61188e1521c782b3f1a8f285e70b4 448 PANTHER PTHR21499:SF3 6 448 4.0E-144 T 21-04-2016 VFU_RS15245 d9d61188e1521c782b3f1a8f285e70b4 448 PANTHER PTHR21499 6 448 4.0E-144 T 21-04-2016 VFU_RS15245 d9d61188e1521c782b3f1a8f285e70b4 448 SUPERFAMILY SSF53633 6 293 7.99E-80 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VFU_RS15245 d9d61188e1521c782b3f1a8f285e70b4 448 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 6 448 1.8E-121 T 21-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VFU_RS15245 d9d61188e1521c782b3f1a8f285e70b4 448 Gene3D G3DSA:3.40.1160.10 107 295 6.8E-63 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VFU_RS15245 d9d61188e1521c782b3f1a8f285e70b4 448 Gene3D G3DSA:3.40.1160.10 6 53 6.8E-63 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VFU_RS15245 d9d61188e1521c782b3f1a8f285e70b4 448 SUPERFAMILY SSF55021 297 394 1.42E-19 T 21-04-2016 VFU_RS06685 7e3d8cc2ad502c59d5d3d2ff9cc7c5d7 463 PANTHER PTHR24096:SF109 3 462 2.3E-152 T 21-04-2016 VFU_RS06685 7e3d8cc2ad502c59d5d3d2ff9cc7c5d7 463 Gene3D G3DSA:3.40.50.980 152 289 1.0E-28 T 21-04-2016 VFU_RS06685 7e3d8cc2ad502c59d5d3d2ff9cc7c5d7 463 SUPERFAMILY SSF56801 4 455 3.92E-88 T 21-04-2016 VFU_RS06685 7e3d8cc2ad502c59d5d3d2ff9cc7c5d7 463 ProSitePatterns PS00455 Putative AMP-binding domain signature. 143 154 - T 21-04-2016 IPR020845 AMP-binding, conserved site VFU_RS06685 7e3d8cc2ad502c59d5d3d2ff9cc7c5d7 463 Gene3D G3DSA:3.30.300.30 355 451 8.6E-17 T 21-04-2016 VFU_RS06685 7e3d8cc2ad502c59d5d3d2ff9cc7c5d7 463 PANTHER PTHR24096 3 462 2.3E-152 T 21-04-2016 VFU_RS06685 7e3d8cc2ad502c59d5d3d2ff9cc7c5d7 463 Gene3D G3DSA:2.30.38.10 307 354 4.0E-6 T 21-04-2016 VFU_RS06685 7e3d8cc2ad502c59d5d3d2ff9cc7c5d7 463 Pfam PF00501 AMP-binding enzyme 5 360 2.3E-53 T 21-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VFU_RS06685 7e3d8cc2ad502c59d5d3d2ff9cc7c5d7 463 Gene3D G3DSA:3.40.50.980 5 151 3.7E-25 T 21-04-2016 VFU_RS06685 7e3d8cc2ad502c59d5d3d2ff9cc7c5d7 463 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 25 448 7.9E-131 T 21-04-2016 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 VFU_RS04415 b531093264862b44b7c7a482384f6c00 123 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 122 29.801 T 21-04-2016 IPR008249 Uncharacterised protein family UPF0231 VFU_RS04415 b531093264862b44b7c7a482384f6c00 123 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 120 4.4E-42 T 21-04-2016 IPR008249 Uncharacterised protein family UPF0231 VFU_RS04415 b531093264862b44b7c7a482384f6c00 123 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 120 4.0E-42 T 21-04-2016 IPR008249 Uncharacterised protein family UPF0231 VFU_RS04415 b531093264862b44b7c7a482384f6c00 123 PIRSF PIRSF006287 1 123 1.8E-47 T 21-04-2016 IPR008249 Uncharacterised protein family UPF0231 VFU_RS00580 b1f31e9d9945edfbd6a28ab1da7c51af 374 SUPERFAMILY SSF53383 6 372 2.69E-82 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VFU_RS00580 b1f31e9d9945edfbd6a28ab1da7c51af 374 PANTHER PTHR30244 1 365 7.2E-62 T 21-04-2016 VFU_RS00580 b1f31e9d9945edfbd6a28ab1da7c51af 374 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 367 9.2E-75 T 21-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VFU_RS00580 b1f31e9d9945edfbd6a28ab1da7c51af 374 Gene3D G3DSA:3.90.1150.10 258 373 1.2E-25 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VFU_RS00580 b1f31e9d9945edfbd6a28ab1da7c51af 374 PIRSF PIRSF000390 1 374 5.8E-68 T 21-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VFU_RS00580 b1f31e9d9945edfbd6a28ab1da7c51af 374 PANTHER PTHR30244:SF3 1 365 7.2E-62 T 21-04-2016 VFU_RS00580 b1f31e9d9945edfbd6a28ab1da7c51af 374 Gene3D G3DSA:3.40.640.10 9 256 1.7E-59 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VFU_RS08705 f648340e16a0aec75f8e762fde020059 201 PANTHER PTHR12992 38 190 2.1E-48 T 21-04-2016 VFU_RS08705 f648340e16a0aec75f8e762fde020059 201 SUPERFAMILY SSF55811 38 190 8.8E-34 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VFU_RS08705 f648340e16a0aec75f8e762fde020059 201 Gene3D G3DSA:3.90.79.10 34 197 2.7E-39 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VFU_RS08705 f648340e16a0aec75f8e762fde020059 201 Pfam PF00293 NUDIX domain 47 150 4.1E-15 T 21-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 VFU_RS01630 3f16b2eec7c48fe377f6e4e5e8e52e2c 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 25 243 2.6E-56 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VFU_RS01630 3f16b2eec7c48fe377f6e4e5e8e52e2c 248 PANTHER PTHR18966 25 246 2.0E-112 T 21-04-2016 VFU_RS01630 3f16b2eec7c48fe377f6e4e5e8e52e2c 248 SUPERFAMILY SSF53850 1 246 1.2E-57 T 21-04-2016 VFU_RS01630 3f16b2eec7c48fe377f6e4e5e8e52e2c 248 SMART SM00079 24 244 0.0078 T 21-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 VFU_RS01630 3f16b2eec7c48fe377f6e4e5e8e52e2c 248 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 46 59 - T 21-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 VFU_RS01630 3f16b2eec7c48fe377f6e4e5e8e52e2c 248 PANTHER PTHR18966:SF205 25 246 2.0E-112 T 21-04-2016 VFU_RS01630 3f16b2eec7c48fe377f6e4e5e8e52e2c 248 Gene3D G3DSA:3.40.190.10 204 247 8.6E-35 T 21-04-2016 VFU_RS01630 3f16b2eec7c48fe377f6e4e5e8e52e2c 248 Gene3D G3DSA:3.40.190.10 23 100 8.6E-35 T 21-04-2016 VFU_RS01630 3f16b2eec7c48fe377f6e4e5e8e52e2c 248 SMART SM00062 24 245 4.3E-70 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VFU_RS01630 3f16b2eec7c48fe377f6e4e5e8e52e2c 248 Gene3D G3DSA:3.40.190.10 101 200 7.4E-28 T 21-04-2016 VFU_RS05790 6605ab53409a18088aa25af865969f95 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 287 1.7E-116 T 21-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VFU_RS05790 6605ab53409a18088aa25af865969f95 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 21-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VFU_RS05790 6605ab53409a18088aa25af865969f95 292 SMART SM01130 1 290 1.3E-136 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VFU_RS05790 6605ab53409a18088aa25af865969f95 292 PANTHER PTHR12128:SF34 1 292 1.2E-140 T 21-04-2016 VFU_RS05790 6605ab53409a18088aa25af865969f95 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 2.0E-34 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VFU_RS05790 6605ab53409a18088aa25af865969f95 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 2.0E-34 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VFU_RS05790 6605ab53409a18088aa25af865969f95 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 2.0E-34 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VFU_RS05790 6605ab53409a18088aa25af865969f95 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 2.0E-34 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VFU_RS05790 6605ab53409a18088aa25af865969f95 292 Gene3D G3DSA:3.20.20.70 1 291 1.3E-112 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS05790 6605ab53409a18088aa25af865969f95 292 Pfam PF00701 Dihydrodipicolinate synthetase family 2 288 2.2E-108 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VFU_RS05790 6605ab53409a18088aa25af865969f95 292 PANTHER PTHR12128 1 292 1.2E-140 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VFU_RS05790 6605ab53409a18088aa25af865969f95 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 64.481 T 21-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VFU_RS05790 6605ab53409a18088aa25af865969f95 292 PIRSF PIRSF001365 1 291 1.7E-89 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VFU_RS05790 6605ab53409a18088aa25af865969f95 292 SUPERFAMILY SSF51569 2 288 4.19E-97 T 21-04-2016 VFU_RS05790 6605ab53409a18088aa25af865969f95 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 21-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VFU_RS04865 742a456b4631d6d6a76a2ae53683843c 558 Pfam PF13492 GAF domain 242 351 1.1E-7 T 21-04-2016 IPR003018 GAF domain GO:0005515 VFU_RS04865 742a456b4631d6d6a76a2ae53683843c 558 SUPERFAMILY SSF55781 227 351 3.08E-8 T 21-04-2016 IPR029016 GAF domain-like VFU_RS04865 742a456b4631d6d6a76a2ae53683843c 558 Gene3D G3DSA:3.30.450.40 248 346 3.5E-5 T 21-04-2016 IPR029016 GAF domain-like VFU_RS04865 742a456b4631d6d6a76a2ae53683843c 558 Gene3D G3DSA:3.30.565.10 414 554 5.1E-11 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS04865 742a456b4631d6d6a76a2ae53683843c 558 Pfam PF06580 Histidine kinase 366 444 8.3E-28 T 21-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 VFU_RS04865 742a456b4631d6d6a76a2ae53683843c 558 PANTHER PTHR34220:SF3 1 553 1.1E-279 T 21-04-2016 VFU_RS04865 742a456b4631d6d6a76a2ae53683843c 558 Pfam PF07694 5TMR of 5TMR-LYT 25 194 5.2E-60 T 21-04-2016 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 VFU_RS04865 742a456b4631d6d6a76a2ae53683843c 558 PANTHER PTHR34220 1 553 1.1E-279 T 21-04-2016 VFU_RS04865 742a456b4631d6d6a76a2ae53683843c 558 SUPERFAMILY SSF55874 420 553 5.07E-10 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS10210 4fc545ffa7c7992ebef869ed55603522 412 Gene3D G3DSA:3.40.190.10 153 332 1.4E-50 T 21-04-2016 VFU_RS10210 4fc545ffa7c7992ebef869ed55603522 412 PRINTS PR00181 Maltose binding protein signature 69 87 2.5E-10 T 21-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 VFU_RS10210 4fc545ffa7c7992ebef869ed55603522 412 PRINTS PR00181 Maltose binding protein signature 304 325 2.5E-10 T 21-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 VFU_RS10210 4fc545ffa7c7992ebef869ed55603522 412 PRINTS PR00181 Maltose binding protein signature 150 169 2.5E-10 T 21-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 VFU_RS10210 4fc545ffa7c7992ebef869ed55603522 412 PRINTS PR00181 Maltose binding protein signature 362 381 2.5E-10 T 21-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 VFU_RS10210 4fc545ffa7c7992ebef869ed55603522 412 PRINTS PR00181 Maltose binding protein signature 129 148 2.5E-10 T 21-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 VFU_RS10210 4fc545ffa7c7992ebef869ed55603522 412 Gene3D G3DSA:3.40.190.10 45 152 3.6E-20 T 21-04-2016 VFU_RS10210 4fc545ffa7c7992ebef869ed55603522 412 PANTHER PTHR30061:SF21 5 410 5.5E-117 T 21-04-2016 VFU_RS10210 4fc545ffa7c7992ebef869ed55603522 412 PANTHER PTHR30061 5 410 5.5E-117 T 21-04-2016 VFU_RS10210 4fc545ffa7c7992ebef869ed55603522 412 SUPERFAMILY SSF53850 26 400 9.72E-88 T 21-04-2016 VFU_RS10210 4fc545ffa7c7992ebef869ed55603522 412 Pfam PF13416 Bacterial extracellular solute-binding protein 46 348 1.9E-52 T 21-04-2016 VFU_RS02780 9a92c812388e3aa8bc333ecb0f6e48fd 153 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 150 1.7E-60 T 21-04-2016 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 VFU_RS02780 9a92c812388e3aa8bc333ecb0f6e48fd 153 PANTHER PTHR35805:SF1 2 153 4.4E-68 T 21-04-2016 VFU_RS02780 9a92c812388e3aa8bc333ecb0f6e48fd 153 SUPERFAMILY SSF54893 1 100 4.71E-36 T 21-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VFU_RS02780 9a92c812388e3aa8bc333ecb0f6e48fd 153 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 33.533 T 21-04-2016 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 VFU_RS02780 9a92c812388e3aa8bc333ecb0f6e48fd 153 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 149 8.0E-20 T 21-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal VFU_RS02780 9a92c812388e3aa8bc333ecb0f6e48fd 153 Gene3D G3DSA:3.30.70.140 2 98 1.7E-36 T 21-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VFU_RS02780 9a92c812388e3aa8bc333ecb0f6e48fd 153 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 97 2.4E-30 T 21-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VFU_RS02780 9a92c812388e3aa8bc333ecb0f6e48fd 153 Gene3D G3DSA:2.30.30.20 101 152 3.5E-23 T 21-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal VFU_RS02780 9a92c812388e3aa8bc333ecb0f6e48fd 153 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 8.0E-38 T 21-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VFU_RS02780 9a92c812388e3aa8bc333ecb0f6e48fd 153 SUPERFAMILY SSF57825 101 151 1.44E-15 T 21-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal VFU_RS02780 9a92c812388e3aa8bc333ecb0f6e48fd 153 PANTHER PTHR35805 2 153 4.4E-68 T 21-04-2016 VFU_RS11890 70d49382f68958aa01184c7e5e82cdaf 252 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 117 136 4.9E-5 T 21-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VFU_RS11890 70d49382f68958aa01184c7e5e82cdaf 252 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 213 221 4.9E-5 T 21-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VFU_RS11890 70d49382f68958aa01184c7e5e82cdaf 252 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 54 61 4.9E-5 T 21-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VFU_RS11890 70d49382f68958aa01184c7e5e82cdaf 252 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 152 163 4.9E-5 T 21-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VFU_RS11890 70d49382f68958aa01184c7e5e82cdaf 252 SUPERFAMILY SSF63380 7 97 5.2E-18 T 21-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 VFU_RS11890 70d49382f68958aa01184c7e5e82cdaf 252 Gene3D G3DSA:3.40.50.80 113 252 4.4E-37 T 21-04-2016 VFU_RS11890 70d49382f68958aa01184c7e5e82cdaf 252 PANTHER PTHR19370:SF98 7 235 1.7E-62 T 21-04-2016 VFU_RS11890 70d49382f68958aa01184c7e5e82cdaf 252 Gene3D G3DSA:2.40.30.10 7 102 1.6E-20 T 21-04-2016 VFU_RS11890 70d49382f68958aa01184c7e5e82cdaf 252 PANTHER PTHR19370 7 235 1.7E-62 T 21-04-2016 VFU_RS11890 70d49382f68958aa01184c7e5e82cdaf 252 SUPERFAMILY SSF52343 112 239 1.02E-30 T 21-04-2016 VFU_RS11890 70d49382f68958aa01184c7e5e82cdaf 252 Pfam PF00175 Oxidoreductase NAD-binding domain 118 227 4.1E-16 T 21-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VFU_RS11890 70d49382f68958aa01184c7e5e82cdaf 252 Pfam PF00970 Oxidoreductase FAD-binding domain 22 94 7.0E-7 T 21-04-2016 IPR008333 Oxidoreductase, FAD-binding domain VFU_RS05160 c6ec8bbfd5d892d97c33837ac865adfa 440 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 21 434 5.2E-89 T 21-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 VFU_RS05160 c6ec8bbfd5d892d97c33837ac865adfa 440 PANTHER PTHR33362 4 439 4.1E-84 T 21-04-2016 VFU_RS05160 c6ec8bbfd5d892d97c33837ac865adfa 440 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 428 1.9E-74 T 21-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VFU_RS05160 c6ec8bbfd5d892d97c33837ac865adfa 440 PIRSF PIRSF006066 5 440 8.2E-75 T 21-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 VFU_RS05160 c6ec8bbfd5d892d97c33837ac865adfa 440 PANTHER PTHR33362:SF7 4 439 4.1E-84 T 21-04-2016 VFU_RS03885 f5bdaf4a40974ffc4c1fef92162b186e 768 Pfam PF00563 EAL domain 519 753 8.3E-62 T 21-04-2016 IPR001633 EAL domain VFU_RS03885 f5bdaf4a40974ffc4c1fef92162b186e 768 SMART SM00052 512 758 2.5E-78 T 21-04-2016 IPR001633 EAL domain VFU_RS03885 f5bdaf4a40974ffc4c1fef92162b186e 768 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 345 502 5.7E-31 T 21-04-2016 IPR000160 GGDEF domain VFU_RS03885 f5bdaf4a40974ffc4c1fef92162b186e 768 SUPERFAMILY SSF55073 354 501 5.34E-35 T 21-04-2016 IPR029787 Nucleotide cyclase VFU_RS03885 f5bdaf4a40974ffc4c1fef92162b186e 768 SUPERFAMILY SSF141868 519 763 6.28E-73 T 21-04-2016 IPR001633 EAL domain VFU_RS03885 f5bdaf4a40974ffc4c1fef92162b186e 768 Gene3D G3DSA:3.30.70.270 350 510 6.8E-40 T 21-04-2016 VFU_RS03885 f5bdaf4a40974ffc4c1fef92162b186e 768 PANTHER PTHR33121 417 764 1.1E-75 T 21-04-2016 VFU_RS03885 f5bdaf4a40974ffc4c1fef92162b186e 768 Gene3D G3DSA:3.30.450.20 91 192 2.7E-5 T 21-04-2016 VFU_RS03885 f5bdaf4a40974ffc4c1fef92162b186e 768 PANTHER PTHR33121:SF13 417 764 1.1E-75 T 21-04-2016 VFU_RS03885 f5bdaf4a40974ffc4c1fef92162b186e 768 Gene3D G3DSA:3.20.20.450 515 764 7.1E-77 T 21-04-2016 IPR001633 EAL domain VFU_RS03885 f5bdaf4a40974ffc4c1fef92162b186e 768 Pfam PF00990 Diguanylate cyclase, GGDEF domain 349 493 6.2E-34 T 21-04-2016 IPR000160 GGDEF domain VFU_RS03885 f5bdaf4a40974ffc4c1fef92162b186e 768 SMART SM00267 338 502 6.6E-43 T 21-04-2016 IPR000160 GGDEF domain VFU_RS06375 e0cbf92f6c4c8f0a9c6c9a08692d8107 397 Pfam PF00155 Aminotransferase class I and II 27 393 2.4E-78 T 21-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VFU_RS06375 e0cbf92f6c4c8f0a9c6c9a08692d8107 397 SUPERFAMILY SSF53383 2 392 3.91E-112 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VFU_RS06375 e0cbf92f6c4c8f0a9c6c9a08692d8107 397 Gene3D G3DSA:3.40.640.10 46 317 1.8E-101 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VFU_RS06375 e0cbf92f6c4c8f0a9c6c9a08692d8107 397 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 245 258 - T 21-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 VFU_RS06375 e0cbf92f6c4c8f0a9c6c9a08692d8107 397 PRINTS PR00799 Aspartate aminotransferase signature 176 195 5.1E-35 T 21-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VFU_RS06375 e0cbf92f6c4c8f0a9c6c9a08692d8107 397 PRINTS PR00799 Aspartate aminotransferase signature 207 219 5.1E-35 T 21-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VFU_RS06375 e0cbf92f6c4c8f0a9c6c9a08692d8107 397 PRINTS PR00799 Aspartate aminotransferase signature 275 300 5.1E-35 T 21-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VFU_RS06375 e0cbf92f6c4c8f0a9c6c9a08692d8107 397 PRINTS PR00799 Aspartate aminotransferase signature 343 361 5.1E-35 T 21-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VFU_RS06375 e0cbf92f6c4c8f0a9c6c9a08692d8107 397 PANTHER PTHR11879 5 396 2.3E-235 T 21-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VFU_RS06375 e0cbf92f6c4c8f0a9c6c9a08692d8107 397 PANTHER PTHR11879:SF7 5 396 2.3E-235 T 21-04-2016 VFU_RS09100 af91609118451a5bae117d5ea667441b 685 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 488 680 3.1E-40 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VFU_RS09100 af91609118451a5bae117d5ea667441b 685 SUPERFAMILY SSF58104 375 683 4.19E-58 T 21-04-2016 VFU_RS09100 af91609118451a5bae117d5ea667441b 685 PANTHER PTHR32089:SF44 303 685 1.6E-134 T 21-04-2016 VFU_RS09100 af91609118451a5bae117d5ea667441b 685 Gene3D G3DSA:1.10.287.950 437 654 9.0E-48 T 21-04-2016 VFU_RS09100 af91609118451a5bae117d5ea667441b 685 PANTHER PTHR32089 303 685 1.6E-134 T 21-04-2016 VFU_RS09100 af91609118451a5bae117d5ea667441b 685 SMART SM00283 422 683 3.8E-37 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VFU_RS04940 bdc2222a103a347494463c0f9af71f7c 244 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 19 240 2.2E-72 T 21-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase VFU_RS04940 bdc2222a103a347494463c0f9af71f7c 244 PANTHER PTHR30616 1 243 2.2E-123 T 21-04-2016 VFU_RS04940 bdc2222a103a347494463c0f9af71f7c 244 PANTHER PTHR30616:SF3 1 243 2.2E-123 T 21-04-2016 VFU_RS04940 bdc2222a103a347494463c0f9af71f7c 244 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 25 241 3.6E-61 T 21-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase VFU_RS04940 bdc2222a103a347494463c0f9af71f7c 244 Gene3D G3DSA:3.60.140.10 2 242 3.1E-94 T 21-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase VFU_RS04940 bdc2222a103a347494463c0f9af71f7c 244 SUPERFAMILY SSF64438 2 242 1.47E-83 T 21-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic VFU_RS11270 bb71b0324021db9aa336959b8548f405 483 PANTHER PTHR11699:SF49 1 479 1.1E-277 T 21-04-2016 VFU_RS11270 bb71b0324021db9aa336959b8548f405 483 SUPERFAMILY SSF53720 5 480 2.75E-171 T 21-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 VFU_RS11270 bb71b0324021db9aa336959b8548f405 483 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 30 475 6.1E-204 T 21-04-2016 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 UniPathway: UPA00733 VFU_RS11270 bb71b0324021db9aa336959b8548f405 483 Gene3D G3DSA:3.40.605.10 10 267 1.9E-101 T 21-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 VFU_RS11270 bb71b0324021db9aa336959b8548f405 483 Pfam PF00171 Aldehyde dehydrogenase family 19 476 3.4E-168 T 21-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 VFU_RS11270 bb71b0324021db9aa336959b8548f405 483 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 21-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 VFU_RS11270 bb71b0324021db9aa336959b8548f405 483 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 21-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 VFU_RS11270 bb71b0324021db9aa336959b8548f405 483 Gene3D G3DSA:3.40.309.10 268 452 4.4E-66 T 21-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 VFU_RS11270 bb71b0324021db9aa336959b8548f405 483 PANTHER PTHR11699 1 479 1.1E-277 T 21-04-2016 VFU_RS03245 155dc498937c0d817edca3a8b3558d41 187 SUPERFAMILY SSF54534 2 140 2.75E-33 T 21-04-2016 VFU_RS03245 155dc498937c0d817edca3a8b3558d41 187 PANTHER PTHR10516 1 83 2.2E-55 T 21-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type VFU_RS03245 155dc498937c0d817edca3a8b3558d41 187 PANTHER PTHR10516 129 185 2.2E-55 T 21-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type VFU_RS03245 155dc498937c0d817edca3a8b3558d41 187 PANTHER PTHR10516:SF316 1 83 2.2E-55 T 21-04-2016 VFU_RS03245 155dc498937c0d817edca3a8b3558d41 187 PANTHER PTHR10516:SF316 129 185 2.2E-55 T 21-04-2016 VFU_RS03245 155dc498937c0d817edca3a8b3558d41 187 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 136 1.1E-10 T 21-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 VFU_RS03245 155dc498937c0d817edca3a8b3558d41 187 Gene3D G3DSA:3.10.50.40 2 80 3.7E-18 T 21-04-2016 VFU_RS03245 155dc498937c0d817edca3a8b3558d41 187 Gene3D G3DSA:3.10.50.40 126 141 3.7E-18 T 21-04-2016 VFU_RS01085 89b72377cf5cc7f479d1e8c5c48bcfb5 66 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 1 52 6.7E-25 T 21-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) VFU_RS01085 89b72377cf5cc7f479d1e8c5c48bcfb5 66 SUPERFAMILY SSF46955 2 57 4.58E-5 T 21-04-2016 IPR009061 Putative DNA-binding domain VFU_RS01085 89b72377cf5cc7f479d1e8c5c48bcfb5 66 PANTHER PTHR36154 1 66 1.2E-21 T 21-04-2016 VFU_RS02515 c59797779c798b185e891cd662b576b2 469 SMART SM01230 102 379 6.4E-154 T 21-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VFU_RS02515 c59797779c798b185e891cd662b576b2 469 SUPERFAMILY SSF54368 3 100 4.71E-36 T 21-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VFU_RS02515 c59797779c798b185e891cd662b576b2 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 21-04-2016 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VFU_RS02515 c59797779c798b185e891cd662b576b2 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 1.2E-139 T 21-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VFU_RS02515 c59797779c798b185e891cd662b576b2 469 Gene3D G3DSA:3.30.590.10 106 457 4.3E-141 T 21-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 VFU_RS02515 c59797779c798b185e891cd662b576b2 469 PANTHER PTHR20852 1 138 5.7E-273 T 21-04-2016 VFU_RS02515 c59797779c798b185e891cd662b576b2 469 PANTHER PTHR20852 160 469 5.7E-273 T 21-04-2016 VFU_RS02515 c59797779c798b185e891cd662b576b2 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 4.9E-31 T 21-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VFU_RS02515 c59797779c798b185e891cd662b576b2 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 21-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VFU_RS02515 c59797779c798b185e891cd662b576b2 469 Gene3D G3DSA:3.10.20.70 3 105 1.1E-39 T 21-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VFU_RS02515 c59797779c798b185e891cd662b576b2 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 21-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VFU_RS02515 c59797779c798b185e891cd662b576b2 469 PANTHER PTHR20852:SF15 1 138 5.7E-273 T 21-04-2016 VFU_RS02515 c59797779c798b185e891cd662b576b2 469 PANTHER PTHR20852:SF15 160 469 5.7E-273 T 21-04-2016 VFU_RS02515 c59797779c798b185e891cd662b576b2 469 SUPERFAMILY SSF55931 102 468 2.45E-138 T 21-04-2016 VFU_RS02515 c59797779c798b185e891cd662b576b2 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 9.9E-213 T 21-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VFU_RS04405 9353e59fbe6576a864017d51be0a330b 749 Gene3D G3DSA:3.40.1090.10 21 216 2.7E-16 T 21-04-2016 VFU_RS04405 9353e59fbe6576a864017d51be0a330b 749 PANTHER PTHR14226:SF37 16 108 2.8E-97 T 21-04-2016 VFU_RS04405 9353e59fbe6576a864017d51be0a330b 749 PANTHER PTHR14226:SF37 124 445 2.8E-97 T 21-04-2016 VFU_RS04405 9353e59fbe6576a864017d51be0a330b 749 Pfam PF01734 Patatin-like phospholipase 22 213 6.9E-33 T 21-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 VFU_RS04405 9353e59fbe6576a864017d51be0a330b 749 Pfam PF07244 Surface antigen variable number repeat 333 403 6.8E-6 T 21-04-2016 IPR010827 Surface antigen variable number GO:0019867 VFU_RS04405 9353e59fbe6576a864017d51be0a330b 749 PANTHER PTHR14226 16 108 2.8E-97 T 21-04-2016 VFU_RS04405 9353e59fbe6576a864017d51be0a330b 749 PANTHER PTHR14226 124 445 2.8E-97 T 21-04-2016 VFU_RS04405 9353e59fbe6576a864017d51be0a330b 749 SUPERFAMILY SSF52151 17 89 9.42E-60 T 21-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 VFU_RS04405 9353e59fbe6576a864017d51be0a330b 749 SUPERFAMILY SSF52151 123 309 9.42E-60 T 21-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 VFU_RS08170 e52de5e6a7144883f3b29d3ea05b61d0 346 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 340 1.0E-86 T 21-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 VFU_RS08170 e52de5e6a7144883f3b29d3ea05b61d0 346 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 252 1.8E-10 T 21-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VFU_RS08170 e52de5e6a7144883f3b29d3ea05b61d0 346 PANTHER PTHR30469 1 338 1.4E-125 T 21-04-2016 VFU_RS08170 e52de5e6a7144883f3b29d3ea05b61d0 346 PANTHER PTHR30469:SF10 1 338 1.4E-125 T 21-04-2016 VFU_RS08170 e52de5e6a7144883f3b29d3ea05b61d0 346 SUPERFAMILY SSF111369 46 265 6.15E-31 T 21-04-2016 VFU_RS08170 e52de5e6a7144883f3b29d3ea05b61d0 346 Gene3D G3DSA:2.40.50.100 62 91 2.7E-14 T 21-04-2016 VFU_RS08170 e52de5e6a7144883f3b29d3ea05b61d0 346 Gene3D G3DSA:2.40.50.100 152 184 2.7E-14 T 21-04-2016 VFU_RS13535 48ef9d1ed675c4741bf9798aceccda2e 127 Gene3D G3DSA:3.90.1010.10 2 126 1.2E-55 T 21-04-2016 VFU_RS13535 48ef9d1ed675c4741bf9798aceccda2e 127 PANTHER PTHR10093:SF3 1 127 7.1E-101 T 21-04-2016 VFU_RS13535 48ef9d1ed675c4741bf9798aceccda2e 127 SUPERFAMILY SSF82649 1 125 1.05E-47 T 21-04-2016 VFU_RS13535 48ef9d1ed675c4741bf9798aceccda2e 127 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 7.1E-69 T 21-04-2016 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 VFU_RS13535 48ef9d1ed675c4741bf9798aceccda2e 127 PANTHER PTHR10093 1 127 7.1E-101 T 21-04-2016 VFU_RS13535 48ef9d1ed675c4741bf9798aceccda2e 127 Pfam PF01592 NifU-like N terminal domain 2 125 1.0E-56 T 21-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 VFU_RS00215 7993d4dff2efbe6f50ba95a42bcbdd29 1400 PANTHER PTHR19376:SF32 570 943 0.0 T 21-04-2016 VFU_RS00215 7993d4dff2efbe6f50ba95a42bcbdd29 1400 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 15 1375 10.453 T 21-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VFU_RS00215 7993d4dff2efbe6f50ba95a42bcbdd29 1400 PANTHER PTHR19376:SF32 1302 1379 0.0 T 21-04-2016 VFU_RS00215 7993d4dff2efbe6f50ba95a42bcbdd29 1400 PANTHER PTHR19376:SF32 4 551 0.0 T 21-04-2016 VFU_RS00215 7993d4dff2efbe6f50ba95a42bcbdd29 1400 PANTHER PTHR19376:SF32 1176 1261 0.0 T 21-04-2016 VFU_RS00215 7993d4dff2efbe6f50ba95a42bcbdd29 1400 PANTHER PTHR19376 961 1157 0.0 T 21-04-2016 VFU_RS00215 7993d4dff2efbe6f50ba95a42bcbdd29 1400 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 3.9E-19 T 21-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VFU_RS00215 7993d4dff2efbe6f50ba95a42bcbdd29 1400 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 2.4E-87 T 21-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VFU_RS00215 7993d4dff2efbe6f50ba95a42bcbdd29 1400 Gene3D G3DSA:2.40.50.100 1156 1209 1.6E-7 T 21-04-2016 VFU_RS00215 7993d4dff2efbe6f50ba95a42bcbdd29 1400 PANTHER PTHR19376 570 943 0.0 T 21-04-2016 VFU_RS00215 7993d4dff2efbe6f50ba95a42bcbdd29 1400 PANTHER PTHR19376:SF32 961 1157 0.0 T 21-04-2016 VFU_RS00215 7993d4dff2efbe6f50ba95a42bcbdd29 1400 SMART SM00663 235 514 1.1E-184 T 21-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VFU_RS00215 7993d4dff2efbe6f50ba95a42bcbdd29 1400 SUPERFAMILY SSF64484 1133 1363 0.0 T 21-04-2016 VFU_RS00215 7993d4dff2efbe6f50ba95a42bcbdd29 1400 SUPERFAMILY SSF64484 16 944 0.0 T 21-04-2016 VFU_RS00215 7993d4dff2efbe6f50ba95a42bcbdd29 1400 Gene3D G3DSA:2.40.40.20 417 489 2.5E-37 T 21-04-2016 VFU_RS00215 7993d4dff2efbe6f50ba95a42bcbdd29 1400 Gene3D G3DSA:2.40.40.20 349 376 2.5E-37 T 21-04-2016 VFU_RS00215 7993d4dff2efbe6f50ba95a42bcbdd29 1400 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1314 3.4E-77 T 21-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VFU_RS00215 7993d4dff2efbe6f50ba95a42bcbdd29 1400 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 9.7E-28 T 21-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VFU_RS00215 7993d4dff2efbe6f50ba95a42bcbdd29 1400 Hamap MF_01323 DNA-directed RNA polymerase subunit gamma [rpoC1]. 13 742 32.416 T 21-04-2016 VFU_RS00215 7993d4dff2efbe6f50ba95a42bcbdd29 1400 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1366 0.0 T 21-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VFU_RS00215 7993d4dff2efbe6f50ba95a42bcbdd29 1400 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 485 1.9E-27 T 21-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VFU_RS00215 7993d4dff2efbe6f50ba95a42bcbdd29 1400 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 395 4.4E-8 T 21-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VFU_RS00215 7993d4dff2efbe6f50ba95a42bcbdd29 1400 PANTHER PTHR19376 1302 1379 0.0 T 21-04-2016 VFU_RS00215 7993d4dff2efbe6f50ba95a42bcbdd29 1400 PANTHER PTHR19376 4 551 0.0 T 21-04-2016 VFU_RS00215 7993d4dff2efbe6f50ba95a42bcbdd29 1400 PANTHER PTHR19376 1176 1261 0.0 T 21-04-2016 VFU_RS19285 7d07ef288f619f2e61bcbf6eeb81da2d 164 ProSitePatterns PS00761 Signal peptidases I signature 3. 148 161 - T 21-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 VFU_RS19285 7d07ef288f619f2e61bcbf6eeb81da2d 164 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 1 164 1.5E-32 T 21-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VFU_RS19285 7d07ef288f619f2e61bcbf6eeb81da2d 164 Gene3D G3DSA:2.170.230.10 65 142 2.5E-20 T 21-04-2016 IPR019766 Peptidase S26A, all-beta subdomain VFU_RS19285 7d07ef288f619f2e61bcbf6eeb81da2d 164 ProSitePatterns PS00760 Signal peptidases I lysine active site. 57 69 - T 21-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 VFU_RS19285 7d07ef288f619f2e61bcbf6eeb81da2d 164 PANTHER PTHR12383:SF27 1 102 1.8E-60 T 21-04-2016 VFU_RS19285 7d07ef288f619f2e61bcbf6eeb81da2d 164 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 143 162 2.3E-16 T 21-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VFU_RS19285 7d07ef288f619f2e61bcbf6eeb81da2d 164 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 55 67 2.3E-16 T 21-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VFU_RS19285 7d07ef288f619f2e61bcbf6eeb81da2d 164 PANTHER PTHR12383:SF27 125 164 1.8E-60 T 21-04-2016 VFU_RS19285 7d07ef288f619f2e61bcbf6eeb81da2d 164 Pfam PF00717 Peptidase S24-like 1 72 2.2E-20 T 21-04-2016 IPR019759 Peptidase S24/S26A/S26B VFU_RS19285 7d07ef288f619f2e61bcbf6eeb81da2d 164 PANTHER PTHR12383 125 164 1.8E-60 T 21-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VFU_RS19285 7d07ef288f619f2e61bcbf6eeb81da2d 164 PANTHER PTHR12383 1 102 1.8E-60 T 21-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VFU_RS19285 7d07ef288f619f2e61bcbf6eeb81da2d 164 Gene3D G3DSA:2.10.109.10 143 164 1.4E-38 T 21-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain VFU_RS19285 7d07ef288f619f2e61bcbf6eeb81da2d 164 Gene3D G3DSA:2.10.109.10 1 64 1.4E-38 T 21-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain VFU_RS19285 7d07ef288f619f2e61bcbf6eeb81da2d 164 SUPERFAMILY SSF51306 1 164 7.59E-52 T 21-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C VFU_RS09955 79f8e0705386f40c0e771eda9a69838a 121 PANTHER PTHR34874 4 121 4.4E-52 T 21-04-2016 VFU_RS09955 79f8e0705386f40c0e771eda9a69838a 121 Pfam PF02635 DsrE/DsrF-like family 6 119 4.6E-18 T 21-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein VFU_RS09955 79f8e0705386f40c0e771eda9a69838a 121 SUPERFAMILY SSF75169 5 119 1.11E-25 T 21-04-2016 IPR027396 DsrEFH-like VFU_RS09955 79f8e0705386f40c0e771eda9a69838a 121 PANTHER PTHR34874:SF2 4 121 4.4E-52 T 21-04-2016 VFU_RS09955 79f8e0705386f40c0e771eda9a69838a 121 Gene3D G3DSA:3.40.1260.10 4 119 9.7E-34 T 21-04-2016 IPR027396 DsrEFH-like VFU_RS07220 ede7d53e4ff1b57a79477d10955e9c58 144 PANTHER PTHR23091:SF236 2 125 1.4E-24 T 21-04-2016 VFU_RS07220 ede7d53e4ff1b57a79477d10955e9c58 144 SUPERFAMILY SSF55729 2 134 1.18E-29 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase VFU_RS07220 ede7d53e4ff1b57a79477d10955e9c58 144 Gene3D G3DSA:3.40.630.30 2 125 2.7E-30 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase VFU_RS07220 ede7d53e4ff1b57a79477d10955e9c58 144 PANTHER PTHR23091 2 125 1.4E-24 T 21-04-2016 VFU_RS07220 ede7d53e4ff1b57a79477d10955e9c58 144 Pfam PF00583 Acetyltransferase (GNAT) family 52 125 4.8E-15 T 21-04-2016 IPR000182 GNAT domain GO:0008080 VFU_RS13455 5063e2c47b56a6cd4affe755e05804ca 84 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 15 77 8.0E-25 T 21-04-2016 IPR010807 Protein of unknown function DUF1407 VFU_RS13455 5063e2c47b56a6cd4affe755e05804ca 84 SUPERFAMILY SSF161187 11 79 2.22E-27 T 21-04-2016 IPR029037 YfgJ-like VFU_RS13455 5063e2c47b56a6cd4affe755e05804ca 84 Pfam PF07191 zinc-ribbons 14 77 6.7E-28 T 21-04-2016 IPR010807 Protein of unknown function DUF1407 VFU_RS13455 5063e2c47b56a6cd4affe755e05804ca 84 Gene3D G3DSA:2.10.290.10 11 79 4.4E-30 T 21-04-2016 IPR029037 YfgJ-like VFU_RS09210 e0deaa423d9afc7945b2f87b5583cda1 353 Gene3D G3DSA:1.20.950.20 120 335 4.3E-63 T 21-04-2016 VFU_RS09210 e0deaa423d9afc7945b2f87b5583cda1 353 PANTHER PTHR30074:SF2 33 345 5.5E-159 T 21-04-2016 VFU_RS09210 e0deaa423d9afc7945b2f87b5583cda1 353 PANTHER PTHR30074 33 345 5.5E-159 T 21-04-2016 VFU_RS09210 e0deaa423d9afc7945b2f87b5583cda1 353 SUPERFAMILY SSF81342 120 334 1.26E-45 T 21-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 VFU_RS09210 e0deaa423d9afc7945b2f87b5583cda1 353 Pfam PF01292 Prokaryotic cytochrome b561 126 307 1.6E-25 T 21-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 VFU_RS09210 e0deaa423d9afc7945b2f87b5583cda1 353 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 123 327 9.4E-82 T 21-04-2016 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 VFU_RS08215 ba51c3d39737feb88c0893f97b795808 310 PANTHER PTHR11061:SF34 1 267 7.7E-93 T 21-04-2016 VFU_RS08215 ba51c3d39737feb88c0893f97b795808 310 SUPERFAMILY SSF53335 7 288 1.84E-52 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS08215 ba51c3d39737feb88c0893f97b795808 310 Gene3D G3DSA:3.40.50.150 44 309 2.3E-55 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS08215 ba51c3d39737feb88c0893f97b795808 310 PANTHER PTHR11061 1 267 7.7E-93 T 21-04-2016 VFU_RS08215 ba51c3d39737feb88c0893f97b795808 310 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 25 310 7.9E-160 T 21-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 VFU_RS04920 fb3035ab796e2a614ea2dd38240c92c5 109 Gene3D G3DSA:3.30.160.100 2 92 4.1E-30 T 21-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 VFU_RS04920 fb3035ab796e2a614ea2dd38240c92c5 109 PANTHER PTHR33231 1 109 1.9E-53 T 21-04-2016 VFU_RS04920 fb3035ab796e2a614ea2dd38240c92c5 109 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 100 1.1E-30 T 21-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 VFU_RS04920 fb3035ab796e2a614ea2dd38240c92c5 109 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 92 1.3E-22 T 21-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 VFU_RS04920 fb3035ab796e2a614ea2dd38240c92c5 109 PANTHER PTHR33231:SF3 1 109 1.9E-53 T 21-04-2016 VFU_RS04920 fb3035ab796e2a614ea2dd38240c92c5 109 SUPERFAMILY SSF69754 1 103 1.44E-29 T 21-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 VFU_RS10180 8484eff70245afbfa2ae067c11bfd7da 549 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 355 547 2.0E-35 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VFU_RS10180 8484eff70245afbfa2ae067c11bfd7da 549 Pfam PF00672 HAMP domain 202 269 1.8E-10 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS10180 8484eff70245afbfa2ae067c11bfd7da 549 PANTHER PTHR32089 169 549 5.3E-70 T 21-04-2016 VFU_RS10180 8484eff70245afbfa2ae067c11bfd7da 549 Gene3D G3DSA:1.10.287.950 305 518 3.6E-41 T 21-04-2016 VFU_RS10180 8484eff70245afbfa2ae067c11bfd7da 549 SMART SM00283 287 548 3.1E-25 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VFU_RS10180 8484eff70245afbfa2ae067c11bfd7da 549 SMART SM00304 218 272 3.3E-9 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS10180 8484eff70245afbfa2ae067c11bfd7da 549 SUPERFAMILY SSF58104 240 549 2.35E-54 T 21-04-2016 VFU_RS03985 c1587c0b26183998936c1a8a8c6c0d99 348 Gene3D G3DSA:3.40.50.2000 9 125 4.3E-4 T 21-04-2016 VFU_RS03985 c1587c0b26183998936c1a8a8c6c0d99 348 Gene3D G3DSA:3.40.50.2000 215 300 5.7E-4 T 21-04-2016 VFU_RS03985 c1587c0b26183998936c1a8a8c6c0d99 348 SUPERFAMILY SSF53756 11 299 2.51E-11 T 21-04-2016 VFU_RS03985 c1587c0b26183998936c1a8a8c6c0d99 348 TIGRFAM TIGR00661 MJ1255: conserved hypothetical protein 3 310 8.5E-108 T 21-04-2016 IPR005262 Conserved hypothetical protein CHP00661 KEGG: 00540+2.4.-.- VFU_RS03985 c1587c0b26183998936c1a8a8c6c0d99 348 Pfam PF13528 Glycosyl transferase family 1 2 299 1.3E-36 T 21-04-2016 VFU_RS07530 229fc4652dad19aba90a4c12440ba422 254 SUPERFAMILY SSF69593 1 247 8.76E-25 T 21-04-2016 VFU_RS07530 229fc4652dad19aba90a4c12440ba422 254 Gene3D G3DSA:3.40.1130.10 54 181 1.5E-8 T 21-04-2016 VFU_RS07530 229fc4652dad19aba90a4c12440ba422 254 PANTHER PTHR10434 1 183 1.8E-20 T 21-04-2016 VFU_RS07530 229fc4652dad19aba90a4c12440ba422 254 Pfam PF01553 Acyltransferase 73 189 3.0E-15 T 21-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VFU_RS07530 229fc4652dad19aba90a4c12440ba422 254 SMART SM00563 86 196 6.3E-13 T 21-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VFU_RS06510 183109777d808233cdddab576cf159f1 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 1.7E-67 T 21-04-2016 VFU_RS06510 183109777d808233cdddab576cf159f1 244 PANTHER PTHR24322 151 183 1.7E-76 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS06510 183109777d808233cdddab576cf159f1 244 PANTHER PTHR24322 10 135 1.7E-76 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS06510 183109777d808233cdddab576cf159f1 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 21-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VFU_RS06510 183109777d808233cdddab576cf159f1 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 242 8.9E-101 T 21-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 VFU_RS06510 183109777d808233cdddab576cf159f1 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 6.9E-17 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS06510 183109777d808233cdddab576cf159f1 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 6.9E-17 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS06510 183109777d808233cdddab576cf159f1 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 6.9E-17 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS06510 183109777d808233cdddab576cf159f1 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 215 1.9E-5 T 21-04-2016 VFU_RS06510 183109777d808233cdddab576cf159f1 244 Gene3D G3DSA:3.40.50.720 1 243 1.1E-90 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS06510 183109777d808233cdddab576cf159f1 244 PANTHER PTHR24322:SF635 151 183 1.7E-76 T 21-04-2016 VFU_RS06510 183109777d808233cdddab576cf159f1 244 PANTHER PTHR24322:SF635 10 135 1.7E-76 T 21-04-2016 VFU_RS06510 183109777d808233cdddab576cf159f1 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 8.3E-53 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS06510 183109777d808233cdddab576cf159f1 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 8.3E-53 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS06510 183109777d808233cdddab576cf159f1 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 8.3E-53 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS06510 183109777d808233cdddab576cf159f1 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 8.3E-53 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS06510 183109777d808233cdddab576cf159f1 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 8.3E-53 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS06510 183109777d808233cdddab576cf159f1 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 8.3E-53 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS06510 183109777d808233cdddab576cf159f1 244 SUPERFAMILY SSF51735 4 243 1.28E-87 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS13580 d504badb637a254e4ff8d398f9bc2662 379 PANTHER PTHR21148:SF26 1 370 1.0E-188 T 21-04-2016 VFU_RS13580 d504badb637a254e4ff8d398f9bc2662 379 PANTHER PTHR21148 1 370 1.0E-188 T 21-04-2016 VFU_RS13580 d504badb637a254e4ff8d398f9bc2662 379 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 5 369 3.8E-178 T 21-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 VFU_RS13580 d504badb637a254e4ff8d398f9bc2662 379 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 3 361 58.316 T 21-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 VFU_RS13580 d504badb637a254e4ff8d398f9bc2662 379 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 5 369 8.3E-187 T 21-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 VFU_RS13580 d504badb637a254e4ff8d398f9bc2662 379 Gene3D G3DSA:3.20.20.105 2 368 7.9E-172 T 21-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 VFU_RS13580 d504badb637a254e4ff8d398f9bc2662 379 Pfam PF01702 Queuine tRNA-ribosyltransferase 128 363 1.8E-96 T 21-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 VFU_RS13580 d504badb637a254e4ff8d398f9bc2662 379 SUPERFAMILY SSF51713 3 366 4.05E-164 T 21-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 VFU_RS04560 13a767ac354af9ae807de34c7116f548 157 SUPERFAMILY SSF54534 81 156 5.89E-24 T 21-04-2016 VFU_RS04560 13a767ac354af9ae807de34c7116f548 157 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 47 - T 21-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VFU_RS04560 13a767ac354af9ae807de34c7116f548 157 PIRSF PIRSF006092 1 157 9.1E-46 T 21-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 VFU_RS04560 13a767ac354af9ae807de34c7116f548 157 SUPERFAMILY SSF46557 2 75 1.27E-24 T 21-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 VFU_RS04560 13a767ac354af9ae807de34c7116f548 157 Pfam PF03449 Transcription elongation factor, N-terminal 4 73 3.5E-24 T 21-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 VFU_RS04560 13a767ac354af9ae807de34c7116f548 157 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 31.997 T 21-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 VFU_RS04560 13a767ac354af9ae807de34c7116f548 157 Gene3D G3DSA:3.10.50.30 78 156 1.2E-31 T 21-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VFU_RS04560 13a767ac354af9ae807de34c7116f548 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 156 2.0E-27 T 21-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VFU_RS04560 13a767ac354af9ae807de34c7116f548 157 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 154 1.0E-52 T 21-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 VFU_RS04560 13a767ac354af9ae807de34c7116f548 157 PANTHER PTHR30437 1 156 1.5E-62 T 21-04-2016 VFU_RS04560 13a767ac354af9ae807de34c7116f548 157 Gene3D G3DSA:1.10.287.180 1 74 5.1E-28 T 21-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 VFU_RS04560 13a767ac354af9ae807de34c7116f548 157 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 21-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VFU_RS11755 ef5397b88af1de072d25321cce531f5a 556 PRINTS PR00681 Ribosomal protein S1 signature 84 103 4.9E-97 T 21-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VFU_RS11755 ef5397b88af1de072d25321cce531f5a 556 PRINTS PR00681 Ribosomal protein S1 signature 212 233 4.9E-97 T 21-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VFU_RS11755 ef5397b88af1de072d25321cce531f5a 556 PRINTS PR00681 Ribosomal protein S1 signature 155 175 4.9E-97 T 21-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VFU_RS11755 ef5397b88af1de072d25321cce531f5a 556 PRINTS PR00681 Ribosomal protein S1 signature 21 39 4.9E-97 T 21-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VFU_RS11755 ef5397b88af1de072d25321cce531f5a 556 PRINTS PR00681 Ribosomal protein S1 signature 330 348 4.9E-97 T 21-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VFU_RS11755 ef5397b88af1de072d25321cce531f5a 556 PRINTS PR00681 Ribosomal protein S1 signature 108 124 4.9E-97 T 21-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VFU_RS11755 ef5397b88af1de072d25321cce531f5a 556 PRINTS PR00681 Ribosomal protein S1 signature 39 53 4.9E-97 T 21-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VFU_RS11755 ef5397b88af1de072d25321cce531f5a 556 PRINTS PR00681 Ribosomal protein S1 signature 290 309 4.9E-97 T 21-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VFU_RS11755 ef5397b88af1de072d25321cce531f5a 556 PRINTS PR00681 Ribosomal protein S1 signature 126 143 4.9E-97 T 21-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VFU_RS11755 ef5397b88af1de072d25321cce531f5a 556 SUPERFAMILY SSF50249 88 174 2.61E-13 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS11755 ef5397b88af1de072d25321cce531f5a 556 SUPERFAMILY SSF50249 190 277 2.09E-26 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS11755 ef5397b88af1de072d25321cce531f5a 556 Pfam PF00575 S1 RNA binding domain 449 520 6.9E-15 T 21-04-2016 IPR003029 S1 domain GO:0003676 VFU_RS11755 ef5397b88af1de072d25321cce531f5a 556 Pfam PF00575 S1 RNA binding domain 362 434 2.1E-20 T 21-04-2016 IPR003029 S1 domain GO:0003676 VFU_RS11755 ef5397b88af1de072d25321cce531f5a 556 Pfam PF00575 S1 RNA binding domain 18 86 1.2E-6 T 21-04-2016 IPR003029 S1 domain GO:0003676 VFU_RS11755 ef5397b88af1de072d25321cce531f5a 556 Pfam PF00575 S1 RNA binding domain 275 347 5.0E-21 T 21-04-2016 IPR003029 S1 domain GO:0003676 VFU_RS11755 ef5397b88af1de072d25321cce531f5a 556 Pfam PF00575 S1 RNA binding domain 189 260 1.8E-21 T 21-04-2016 IPR003029 S1 domain GO:0003676 VFU_RS11755 ef5397b88af1de072d25321cce531f5a 556 Pfam PF00575 S1 RNA binding domain 103 171 5.8E-8 T 21-04-2016 IPR003029 S1 domain GO:0003676 VFU_RS11755 ef5397b88af1de072d25321cce531f5a 556 SMART SM00316 103 171 1.2E-7 T 21-04-2016 IPR022967 RNA-binding domain, S1 VFU_RS11755 ef5397b88af1de072d25321cce531f5a 556 SMART SM00316 190 260 1.2E-27 T 21-04-2016 IPR022967 RNA-binding domain, S1 VFU_RS11755 ef5397b88af1de072d25321cce531f5a 556 SMART SM00316 362 434 4.6E-21 T 21-04-2016 IPR022967 RNA-binding domain, S1 VFU_RS11755 ef5397b88af1de072d25321cce531f5a 556 SMART SM00316 275 347 1.9E-27 T 21-04-2016 IPR022967 RNA-binding domain, S1 VFU_RS11755 ef5397b88af1de072d25321cce531f5a 556 SMART SM00316 449 520 7.4E-20 T 21-04-2016 IPR022967 RNA-binding domain, S1 VFU_RS11755 ef5397b88af1de072d25321cce531f5a 556 SMART SM00316 19 87 4.9E-4 T 21-04-2016 IPR022967 RNA-binding domain, S1 VFU_RS11755 ef5397b88af1de072d25321cce531f5a 556 SUPERFAMILY SSF50249 429 539 2.31E-23 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS11755 ef5397b88af1de072d25321cce531f5a 556 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 1.3E-230 T 21-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VFU_RS11755 ef5397b88af1de072d25321cce531f5a 556 PANTHER PTHR10724 1 514 7.6E-275 T 21-04-2016 VFU_RS11755 ef5397b88af1de072d25321cce531f5a 556 PIRSF PIRSF002111 1 534 7.1E-218 T 21-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VFU_RS11755 ef5397b88af1de072d25321cce531f5a 556 Gene3D G3DSA:2.40.50.140 102 172 1.2E-13 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS11755 ef5397b88af1de072d25321cce531f5a 556 SUPERFAMILY SSF50249 4 112 8.06E-18 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS11755 ef5397b88af1de072d25321cce531f5a 556 Gene3D G3DSA:2.40.50.140 192 278 1.4E-29 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS11755 ef5397b88af1de072d25321cce531f5a 556 Gene3D G3DSA:2.40.50.140 279 362 3.7E-30 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS11755 ef5397b88af1de072d25321cce531f5a 556 Gene3D G3DSA:2.40.50.140 21 101 6.8E-11 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS11755 ef5397b88af1de072d25321cce531f5a 556 PANTHER PTHR10724:SF6 1 514 7.6E-275 T 21-04-2016 VFU_RS11755 ef5397b88af1de072d25321cce531f5a 556 Gene3D G3DSA:2.40.50.140 363 442 2.9E-25 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS11755 ef5397b88af1de072d25321cce531f5a 556 Gene3D G3DSA:2.40.50.140 445 531 2.6E-21 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS11755 ef5397b88af1de072d25321cce531f5a 556 SUPERFAMILY SSF50249 347 438 8.21E-21 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS11755 ef5397b88af1de072d25321cce531f5a 556 SUPERFAMILY SSF50249 255 364 1.0E-28 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS14730 af269732480586def5d7ff277bf95580 470 Gene3D G3DSA:3.40.1380.20 327 468 2.4E-44 T 21-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS14730 af269732480586def5d7ff277bf95580 470 SUPERFAMILY SSF50800 70 167 6.8E-30 T 21-04-2016 IPR011037 Pyruvate kinase-like, insert domain VFU_RS14730 af269732480586def5d7ff277bf95580 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 6.5E-188 T 21-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS14730 af269732480586def5d7ff277bf95580 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 2.3E-79 T 21-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS14730 af269732480586def5d7ff277bf95580 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 2.3E-79 T 21-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS14730 af269732480586def5d7ff277bf95580 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 2.3E-79 T 21-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS14730 af269732480586def5d7ff277bf95580 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 2.3E-79 T 21-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS14730 af269732480586def5d7ff277bf95580 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 2.3E-79 T 21-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS14730 af269732480586def5d7ff277bf95580 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 2.3E-79 T 21-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS14730 af269732480586def5d7ff277bf95580 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 2.3E-79 T 21-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS14730 af269732480586def5d7ff277bf95580 470 Gene3D G3DSA:2.40.33.10 73 168 5.7E-33 T 21-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS14730 af269732480586def5d7ff277bf95580 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 21-04-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS14730 af269732480586def5d7ff277bf95580 470 Gene3D G3DSA:3.20.20.60 2 72 1.4E-117 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VFU_RS14730 af269732480586def5d7ff277bf95580 470 Gene3D G3DSA:3.20.20.60 169 326 1.4E-117 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VFU_RS14730 af269732480586def5d7ff277bf95580 470 PANTHER PTHR11817 1 464 2.1E-256 T 21-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS14730 af269732480586def5d7ff277bf95580 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 1.2E-29 T 21-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS14730 af269732480586def5d7ff277bf95580 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 341 5.6E-156 T 21-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS14730 af269732480586def5d7ff277bf95580 470 SUPERFAMILY SSF51621 1 74 1.47E-101 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VFU_RS14730 af269732480586def5d7ff277bf95580 470 SUPERFAMILY SSF51621 156 339 1.47E-101 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VFU_RS14730 af269732480586def5d7ff277bf95580 470 SUPERFAMILY SSF52935 323 469 1.57E-34 T 21-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS07490 4c65a0583129fcf7cd4c42be427ac370 148 Pfam PF13279 Thioesterase-like superfamily 18 123 6.3E-14 T 21-04-2016 VFU_RS07490 4c65a0583129fcf7cd4c42be427ac370 148 Gene3D G3DSA:3.10.129.10 12 130 3.2E-35 T 21-04-2016 IPR029069 HotDog domain VFU_RS07490 4c65a0583129fcf7cd4c42be427ac370 148 PANTHER PTHR31793:SF9 18 134 5.0E-26 T 21-04-2016 VFU_RS07490 4c65a0583129fcf7cd4c42be427ac370 148 PANTHER PTHR31793 18 134 5.0E-26 T 21-04-2016 VFU_RS07490 4c65a0583129fcf7cd4c42be427ac370 148 SUPERFAMILY SSF54637 9 143 5.29E-31 T 21-04-2016 IPR029069 HotDog domain VFU_RS07535 c71218bfd02f428164c879a00c1d38b1 240 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 28 238 5.4E-74 T 21-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal VFU_RS15310 21a3b50ac7f9422011348eb845dbe42e 221 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 8 221 1.9E-52 T 21-04-2016 IPR026387 Outer membrane protein VFU_RS15310 21a3b50ac7f9422011348eb845dbe42e 221 Pfam PF13505 Outer membrane protein beta-barrel domain 9 221 4.5E-17 T 21-04-2016 IPR027385 Outer membrane protein beta-barrel VFU_RS07055 22cda3b512bcff561c9a589779183970 668 PANTHER PTHR32089:SF34 197 668 3.0E-93 T 21-04-2016 VFU_RS07055 22cda3b512bcff561c9a589779183970 668 PANTHER PTHR32089 197 668 3.0E-93 T 21-04-2016 VFU_RS07055 22cda3b512bcff561c9a589779183970 668 SMART SM00283 409 667 3.6E-51 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VFU_RS07055 22cda3b512bcff561c9a589779183970 668 Gene3D G3DSA:1.10.287.950 423 636 4.1E-49 T 21-04-2016 VFU_RS07055 22cda3b512bcff561c9a589779183970 668 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 475 666 5.2E-41 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VFU_RS07055 22cda3b512bcff561c9a589779183970 668 SMART SM00304 337 391 1.5E-9 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS07055 22cda3b512bcff561c9a589779183970 668 Pfam PF00672 HAMP domain 318 387 3.7E-11 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS07055 22cda3b512bcff561c9a589779183970 668 SUPERFAMILY SSF58104 359 668 4.45E-67 T 21-04-2016 VFU_RS03375 4b6ba1581a9e0b6e5af0afe384d87ffe 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 3 143 3.7E-50 T 21-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 VFU_RS03375 4b6ba1581a9e0b6e5af0afe384d87ffe 144 PANTHER PTHR12934 1 144 2.2E-68 T 21-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 VFU_RS03375 4b6ba1581a9e0b6e5af0afe384d87ffe 144 SUPERFAMILY SSF52080 4 143 1.44E-46 T 21-04-2016 IPR021131 Ribosomal protein L18e/L15P VFU_RS03375 4b6ba1581a9e0b6e5af0afe384d87ffe 144 Gene3D G3DSA:3.100.10.10 32 143 2.3E-27 T 21-04-2016 VFU_RS03375 4b6ba1581a9e0b6e5af0afe384d87ffe 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.052 T 21-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 VFU_RS03375 4b6ba1581a9e0b6e5af0afe384d87ffe 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 21-04-2016 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS03375 4b6ba1581a9e0b6e5af0afe384d87ffe 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 1.1E-31 T 21-04-2016 IPR021131 Ribosomal protein L18e/L15P VFU_RS07095 149709d7b456c1d7455225d799e7a730 271 PANTHER PTHR11019:SF46 152 263 1.4E-24 T 21-04-2016 VFU_RS07095 149709d7b456c1d7455225d799e7a730 271 Pfam PF12833 Helix-turn-helix domain 179 256 2.5E-16 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VFU_RS07095 149709d7b456c1d7455225d799e7a730 271 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 209 251 - T 21-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VFU_RS07095 149709d7b456c1d7455225d799e7a730 271 SUPERFAMILY SSF46689 208 257 4.18E-10 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS07095 149709d7b456c1d7455225d799e7a730 271 SMART SM00342 173 255 1.2E-22 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VFU_RS07095 149709d7b456c1d7455225d799e7a730 271 PANTHER PTHR11019 152 263 1.4E-24 T 21-04-2016 VFU_RS07095 149709d7b456c1d7455225d799e7a730 271 Gene3D G3DSA:1.10.10.60 207 254 1.1E-11 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS11805 fe4fe3f333e9c1a7a8adc8db7ea83954 444 Pfam PF00158 Sigma-54 interaction domain 144 310 2.0E-69 T 21-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VFU_RS11805 fe4fe3f333e9c1a7a8adc8db7ea83954 444 SUPERFAMILY SSF52172 2 188 4.84E-37 T 21-04-2016 IPR011006 CheY-like superfamily VFU_RS11805 fe4fe3f333e9c1a7a8adc8db7ea83954 444 Pfam PF02954 Bacterial regulatory protein, Fis family 395 435 6.5E-8 T 21-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VFU_RS11805 fe4fe3f333e9c1a7a8adc8db7ea83954 444 Gene3D G3DSA:3.40.50.300 143 316 7.7E-55 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS11805 fe4fe3f333e9c1a7a8adc8db7ea83954 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 21-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VFU_RS11805 fe4fe3f333e9c1a7a8adc8db7ea83954 444 PANTHER PTHR32071 1 443 3.6E-265 T 21-04-2016 VFU_RS11805 fe4fe3f333e9c1a7a8adc8db7ea83954 444 SUPERFAMILY SSF52540 144 374 4.48E-67 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS11805 fe4fe3f333e9c1a7a8adc8db7ea83954 444 PANTHER PTHR32071:SF11 1 443 3.6E-265 T 21-04-2016 VFU_RS11805 fe4fe3f333e9c1a7a8adc8db7ea83954 444 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 21-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VFU_RS11805 fe4fe3f333e9c1a7a8adc8db7ea83954 444 Gene3D G3DSA:1.10.10.60 369 437 6.3E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS11805 fe4fe3f333e9c1a7a8adc8db7ea83954 444 Pfam PF00072 Response regulator receiver domain 4 114 1.4E-23 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS11805 fe4fe3f333e9c1a7a8adc8db7ea83954 444 Gene3D G3DSA:3.40.50.2300 3 127 2.1E-31 T 21-04-2016 VFU_RS11805 fe4fe3f333e9c1a7a8adc8db7ea83954 444 Gene3D G3DSA:1.10.8.60 317 368 2.1E-22 T 21-04-2016 VFU_RS11805 fe4fe3f333e9c1a7a8adc8db7ea83954 444 SMART SM00382 164 308 9.4E-11 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS11805 fe4fe3f333e9c1a7a8adc8db7ea83954 444 SMART SM00448 2 114 9.5E-23 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS11805 fe4fe3f333e9c1a7a8adc8db7ea83954 444 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 168 181 - T 21-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VFU_RS11805 fe4fe3f333e9c1a7a8adc8db7ea83954 444 SUPERFAMILY SSF46689 385 438 5.73E-10 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS06150 31f859afc9f30d1e330001f80c6c1eea 388 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 42.603 T 21-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 VFU_RS06150 31f859afc9f30d1e330001f80c6c1eea 388 Gene3D G3DSA:3.30.470.20 96 239 8.3E-58 T 21-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VFU_RS06150 31f859afc9f30d1e330001f80c6c1eea 388 PIRSF PIRSF001554 1 388 1.8E-154 T 21-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 VFU_RS06150 31f859afc9f30d1e330001f80c6c1eea 388 Gene3D G3DSA:3.30.1490.20 22 95 1.5E-31 T 21-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VFU_RS06150 31f859afc9f30d1e330001f80c6c1eea 388 Gene3D G3DSA:3.40.50.261 241 383 3.3E-66 T 21-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 VFU_RS06150 31f859afc9f30d1e330001f80c6c1eea 388 Pfam PF00549 CoA-ligase 262 382 3.4E-25 T 21-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 VFU_RS06150 31f859afc9f30d1e330001f80c6c1eea 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 3.7E-173 T 21-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 VFU_RS06150 31f859afc9f30d1e330001f80c6c1eea 388 PANTHER PTHR11815 1 388 1.7E-229 T 21-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 VFU_RS06150 31f859afc9f30d1e330001f80c6c1eea 388 SUPERFAMILY SSF52210 240 385 9.94E-54 T 21-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 VFU_RS06150 31f859afc9f30d1e330001f80c6c1eea 388 SUPERFAMILY SSF56059 1 238 1.0E-79 T 21-04-2016 VFU_RS06150 31f859afc9f30d1e330001f80c6c1eea 388 Pfam PF08442 ATP-grasp domain 2 203 2.4E-79 T 21-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 VFU_RS06150 31f859afc9f30d1e330001f80c6c1eea 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 21-04-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 VFU_RS12040 3051d4931b70dc40f2f6e0fe001a3fd5 667 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 327 1.8E-84 T 21-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 VFU_RS12040 3051d4931b70dc40f2f6e0fe001a3fd5 667 Gene3D G3DSA:3.20.20.70 1 358 1.2E-119 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS12040 3051d4931b70dc40f2f6e0fe001a3fd5 667 SUPERFAMILY SSF51905 520 664 1.37E-18 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS12040 3051d4931b70dc40f2f6e0fe001a3fd5 667 SUPERFAMILY SSF51905 373 431 1.37E-18 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS12040 3051d4931b70dc40f2f6e0fe001a3fd5 667 Gene3D G3DSA:3.50.50.60 469 620 2.4E-42 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS12040 3051d4931b70dc40f2f6e0fe001a3fd5 667 Gene3D G3DSA:3.50.50.60 359 460 2.7E-27 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS12040 3051d4931b70dc40f2f6e0fe001a3fd5 667 PANTHER PTHR22893 2 416 6.3E-244 T 21-04-2016 VFU_RS12040 3051d4931b70dc40f2f6e0fe001a3fd5 667 SUPERFAMILY SSF51971 332 515 1.26E-41 T 21-04-2016 VFU_RS12040 3051d4931b70dc40f2f6e0fe001a3fd5 667 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 374 628 8.1E-26 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS12040 3051d4931b70dc40f2f6e0fe001a3fd5 667 PRINTS PR00419 Adrenodoxin reductase family signature 375 397 8.6E-10 T 21-04-2016 VFU_RS12040 3051d4931b70dc40f2f6e0fe001a3fd5 667 PRINTS PR00419 Adrenodoxin reductase family signature 398 411 8.6E-10 T 21-04-2016 VFU_RS12040 3051d4931b70dc40f2f6e0fe001a3fd5 667 SUPERFAMILY SSF51395 2 361 5.38E-108 T 21-04-2016 VFU_RS12040 3051d4931b70dc40f2f6e0fe001a3fd5 667 PANTHER PTHR22893:SF25 2 416 6.3E-244 T 21-04-2016 VFU_RS15045 c4ae45dd88d443d0f240be7ff0a40d08 310 PIRSF PIRSF000102 1 307 1.9E-61 T 21-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 VFU_RS15045 c4ae45dd88d443d0f240be7ff0a40d08 310 SUPERFAMILY SSF56327 147 309 6.64E-41 T 21-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VFU_RS15045 c4ae45dd88d443d0f240be7ff0a40d08 310 Gene3D G3DSA:3.40.50.720 1 145 3.4E-57 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS15045 c4ae45dd88d443d0f240be7ff0a40d08 310 Gene3D G3DSA:3.90.110.10 147 310 9.9E-61 T 21-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VFU_RS15045 c4ae45dd88d443d0f240be7ff0a40d08 310 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 308 7.4E-49 T 21-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 VFU_RS15045 c4ae45dd88d443d0f240be7ff0a40d08 310 PANTHER PTHR11540 1 310 5.5E-219 T 21-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 VFU_RS15045 c4ae45dd88d443d0f240be7ff0a40d08 310 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 21-04-2016 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: REACT_474 VFU_RS15045 c4ae45dd88d443d0f240be7ff0a40d08 310 PANTHER PTHR11540:SF22 1 310 5.5E-219 T 21-04-2016 VFU_RS15045 c4ae45dd88d443d0f240be7ff0a40d08 310 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 3.6E-46 T 21-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 VFU_RS15045 c4ae45dd88d443d0f240be7ff0a40d08 310 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 310 57.62 T 21-04-2016 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 VFU_RS15045 c4ae45dd88d443d0f240be7ff0a40d08 310 SUPERFAMILY SSF51735 1 145 9.36E-39 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS15045 c4ae45dd88d443d0f240be7ff0a40d08 310 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 310 7.1E-130 T 21-04-2016 IPR010097 Malate dehydrogenase, type 1 GO:0006108|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 VFU_RS05155 5ed0113a637236fc2afe9c5c9a379b52 205 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 31 161 8.1E-26 T 21-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component VFU_RS05155 5ed0113a637236fc2afe9c5c9a379b52 205 PANTHER PTHR35011 27 184 2.0E-20 T 21-04-2016 VFU_RS12710 6b252a3f294bf9caf25ce3e23feec227 116 SUPERFAMILY SSF54913 1 102 4.45E-21 T 21-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta VFU_RS12710 6b252a3f294bf9caf25ce3e23feec227 116 SMART SM00938 6 104 1.1E-5 T 21-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VFU_RS12710 6b252a3f294bf9caf25ce3e23feec227 116 Gene3D G3DSA:3.30.70.120 3 102 1.2E-8 T 21-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VFU_RS06295 a7d6c90fb1dcf751bfebb6ca01e65394 68 PANTHER PTHR37531 1 68 2.8E-23 T 21-04-2016 VFU_RS06295 a7d6c90fb1dcf751bfebb6ca01e65394 68 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 56 2.7E-16 T 21-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 VFU_RS06295 a7d6c90fb1dcf751bfebb6ca01e65394 68 Pfam PF04995 Heme exporter protein D (CcmD) 13 56 2.8E-17 T 21-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 VFU_RS06295 a7d6c90fb1dcf751bfebb6ca01e65394 68 PANTHER PTHR37531:SF1 1 68 2.8E-23 T 21-04-2016 VFU_RS08150 b45e85db3f0610e01d2c4cd4686cbc9f 342 SUPERFAMILY SSF46689 282 336 1.97E-6 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS08150 b45e85db3f0610e01d2c4cd4686cbc9f 342 PANTHER PTHR32071 1 342 7.6E-213 T 21-04-2016 VFU_RS08150 b45e85db3f0610e01d2c4cd4686cbc9f 342 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 5 334 1.1E-162 T 21-04-2016 IPR014317 Transcription activator PspF VFU_RS08150 b45e85db3f0610e01d2c4cd4686cbc9f 342 PANTHER PTHR32071:SF38 1 342 7.6E-213 T 21-04-2016 VFU_RS08150 b45e85db3f0610e01d2c4cd4686cbc9f 342 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 91 106 - T 21-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VFU_RS08150 b45e85db3f0610e01d2c4cd4686cbc9f 342 Gene3D G3DSA:1.10.8.60 177 227 3.5E-22 T 21-04-2016 VFU_RS08150 b45e85db3f0610e01d2c4cd4686cbc9f 342 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 219 228 - T 21-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VFU_RS08150 b45e85db3f0610e01d2c4cd4686cbc9f 342 Gene3D G3DSA:1.10.10.60 228 323 3.9E-9 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS08150 b45e85db3f0610e01d2c4cd4686cbc9f 342 SUPERFAMILY SSF52540 4 239 3.5E-65 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS08150 b45e85db3f0610e01d2c4cd4686cbc9f 342 Gene3D G3DSA:3.40.50.300 3 176 7.3E-53 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS08150 b45e85db3f0610e01d2c4cd4686cbc9f 342 Pfam PF02954 Bacterial regulatory protein, Fis family 295 328 6.9E-5 T 21-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VFU_RS08150 b45e85db3f0610e01d2c4cd4686cbc9f 342 SMART SM00382 25 177 2.8E-9 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS08150 b45e85db3f0610e01d2c4cd4686cbc9f 342 Pfam PF00158 Sigma-54 interaction domain 5 168 1.1E-57 T 21-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VFU_RS10780 4bd9b4f73a738274a6f9df07fcec1967 212 PANTHER PTHR30246 1 211 4.9E-111 T 21-04-2016 VFU_RS10780 4bd9b4f73a738274a6f9df07fcec1967 212 Pfam PF01081 KDPG and KHG aldolase 11 202 2.9E-75 T 21-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VFU_RS10780 4bd9b4f73a738274a6f9df07fcec1967 212 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 40 49 - T 21-04-2016 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562|UniPathway: UPA00227|UniPathway: UPA00856 VFU_RS10780 4bd9b4f73a738274a6f9df07fcec1967 212 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 128 141 - T 21-04-2016 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VFU_RS10780 4bd9b4f73a738274a6f9df07fcec1967 212 SUPERFAMILY SSF51569 3 210 4.76E-69 T 21-04-2016 VFU_RS10780 4bd9b4f73a738274a6f9df07fcec1967 212 Gene3D G3DSA:3.20.20.70 5 211 2.1E-75 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS10780 4bd9b4f73a738274a6f9df07fcec1967 212 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 10 209 7.0E-83 T 21-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VFU_RS10780 4bd9b4f73a738274a6f9df07fcec1967 212 PANTHER PTHR30246:SF5 1 211 4.9E-111 T 21-04-2016 VFU_RS00400 593fa4068baba1194a58c48f58156e3b 149 SUPERFAMILY SSF52304 4 145 1.44E-62 T 21-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 VFU_RS00400 593fa4068baba1194a58c48f58156e3b 149 Pfam PF01220 Dehydroquinase class II 6 142 1.7E-60 T 21-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 VFU_RS00400 593fa4068baba1194a58c48f58156e3b 149 PIRSF PIRSF001399 3 149 6.8E-61 T 21-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 VFU_RS00400 593fa4068baba1194a58c48f58156e3b 149 PANTHER PTHR21272 2 149 5.4E-91 T 21-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 VFU_RS00400 593fa4068baba1194a58c48f58156e3b 149 Gene3D G3DSA:3.40.50.9100 5 147 2.3E-69 T 21-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 VFU_RS00400 593fa4068baba1194a58c48f58156e3b 149 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 21-04-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 VFU_RS00400 593fa4068baba1194a58c48f58156e3b 149 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 145 5.7E-66 T 21-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 VFU_RS00400 593fa4068baba1194a58c48f58156e3b 149 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 149 75.348 T 21-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 VFU_RS00400 593fa4068baba1194a58c48f58156e3b 149 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 21 149 1.0E-60 T 21-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 VFU_RS11255 6e8f8eebfd6f8494f8dcfcc61feeeff6 208 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 54 - T 21-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VFU_RS11255 6e8f8eebfd6f8494f8dcfcc61feeeff6 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 2.9E-7 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VFU_RS11255 6e8f8eebfd6f8494f8dcfcc61feeeff6 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 2.9E-7 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VFU_RS11255 6e8f8eebfd6f8494f8dcfcc61feeeff6 208 Gene3D G3DSA:1.10.357.10 3 206 2.2E-38 T 21-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 VFU_RS11255 6e8f8eebfd6f8494f8dcfcc61feeeff6 208 PANTHER PTHR30055:SF73 4 174 1.9E-48 T 21-04-2016 VFU_RS11255 6e8f8eebfd6f8494f8dcfcc61feeeff6 208 SUPERFAMILY SSF46689 3 74 2.87E-18 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS11255 6e8f8eebfd6f8494f8dcfcc61feeeff6 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 4.5E-12 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VFU_RS11255 6e8f8eebfd6f8494f8dcfcc61feeeff6 208 PANTHER PTHR30055 4 174 1.9E-48 T 21-04-2016 VFU_RS11255 6e8f8eebfd6f8494f8dcfcc61feeeff6 208 SUPERFAMILY SSF48498 80 207 1.25E-41 T 21-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal VFU_RS00380 377c0bf4a4693d82c11c9858d3e0c3a7 393 Gene3D G3DSA:1.20.1250.20 13 190 4.1E-14 T 21-04-2016 VFU_RS00380 377c0bf4a4693d82c11c9858d3e0c3a7 393 PIRSF PIRSF004925 2 386 9.1E-105 T 21-04-2016 IPR026032 Probable 3-phenylpropionic acid transporter VFU_RS00380 377c0bf4a4693d82c11c9858d3e0c3a7 393 PANTHER PTHR23522:SF3 1 393 3.2E-143 T 21-04-2016 VFU_RS00380 377c0bf4a4693d82c11c9858d3e0c3a7 393 SUPERFAMILY SSF103473 7 373 1.7E-37 T 21-04-2016 IPR020846 Major facilitator superfamily domain VFU_RS00380 377c0bf4a4693d82c11c9858d3e0c3a7 393 Gene3D G3DSA:1.20.1250.20 199 373 5.6E-21 T 21-04-2016 VFU_RS00380 377c0bf4a4693d82c11c9858d3e0c3a7 393 Pfam PF12832 MFS_1 like family 13 361 4.2E-44 T 21-04-2016 IPR024989 Major facilitator superfamily associated domain VFU_RS00380 377c0bf4a4693d82c11c9858d3e0c3a7 393 PANTHER PTHR23522 1 393 3.2E-143 T 21-04-2016 VFU_RS07060 529f895a0efe3068ce9e74de4d681b05 697 PANTHER PTHR32552:SF37 45 697 1.3E-157 T 21-04-2016 VFU_RS07060 529f895a0efe3068ce9e74de4d681b05 697 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 55 697 1.2E-95 T 21-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 VFU_RS07060 529f895a0efe3068ce9e74de4d681b05 697 Gene3D G3DSA:2.40.170.20 171 697 5.5E-114 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 VFU_RS07060 529f895a0efe3068ce9e74de4d681b05 697 Pfam PF00593 TonB dependent receptor 466 696 5.3E-26 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 VFU_RS07060 529f895a0efe3068ce9e74de4d681b05 697 PANTHER PTHR32552 45 697 1.3E-157 T 21-04-2016 VFU_RS07060 529f895a0efe3068ce9e74de4d681b05 697 Gene3D G3DSA:2.170.130.10 39 162 3.2E-27 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 VFU_RS07060 529f895a0efe3068ce9e74de4d681b05 697 SUPERFAMILY SSF56935 24 697 2.38E-108 T 21-04-2016 VFU_RS07060 529f895a0efe3068ce9e74de4d681b05 697 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 151 1.3E-11 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 VFU_RS08235 a62aa62fb309e35679f476facacc5412 566 SUPERFAMILY SSF161098 300 538 2.22E-26 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS08235 a62aa62fb309e35679f476facacc5412 566 SUPERFAMILY SSF161098 6 271 2.88E-21 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS08235 a62aa62fb309e35679f476facacc5412 566 Gene3D G3DSA:1.10.3720.10 6 275 8.2E-17 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS08235 a62aa62fb309e35679f476facacc5412 566 Gene3D G3DSA:1.10.3720.10 302 546 4.3E-22 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS08235 a62aa62fb309e35679f476facacc5412 566 PANTHER PTHR30183 1 548 1.2E-192 T 21-04-2016 VFU_RS08235 a62aa62fb309e35679f476facacc5412 566 PANTHER PTHR30183:SF6 1 548 1.2E-192 T 21-04-2016 VFU_RS15105 ad8cefd83479d8910ead74f249709e6d 188 PIRSF PIRSF006305 1 188 1.6E-56 T 21-04-2016 IPR003697 Maf-like protein GO:0005737 VFU_RS15105 ad8cefd83479d8910ead74f249709e6d 188 Gene3D G3DSA:3.90.950.10 4 187 9.8E-71 T 21-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like VFU_RS15105 ad8cefd83479d8910ead74f249709e6d 188 Pfam PF02545 Maf-like protein 5 186 1.8E-61 T 21-04-2016 IPR003697 Maf-like protein GO:0005737 VFU_RS15105 ad8cefd83479d8910ead74f249709e6d 188 TIGRFAM TIGR00172 maf: septum formation protein Maf 4 184 2.7E-59 T 21-04-2016 IPR003697 Maf-like protein GO:0005737 VFU_RS15105 ad8cefd83479d8910ead74f249709e6d 188 PANTHER PTHR11746 121 184 1.4E-14 T 21-04-2016 VFU_RS15105 ad8cefd83479d8910ead74f249709e6d 188 SUPERFAMILY SSF52972 2 186 2.88E-63 T 21-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like VFU_RS15105 ad8cefd83479d8910ead74f249709e6d 188 Hamap MF_00528 Septum formation protein Maf [maf]. 5 188 30.058 T 21-04-2016 IPR003697 Maf-like protein GO:0005737 VFU_RS07090 41c652b40d132210046a6de0faf39e0b 178 PANTHER PTHR30289 18 178 1.8E-71 T 21-04-2016 VFU_RS07090 41c652b40d132210046a6de0faf39e0b 178 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 39 175 7.1E-33 T 21-04-2016 IPR005247 YbhB/YbcL VFU_RS07090 41c652b40d132210046a6de0faf39e0b 178 SUPERFAMILY SSF49777 22 178 9.94E-47 T 21-04-2016 IPR008914 Phosphatidylethanolamine-binding protein VFU_RS07090 41c652b40d132210046a6de0faf39e0b 178 Gene3D G3DSA:3.90.280.10 21 178 1.8E-49 T 21-04-2016 IPR008914 Phosphatidylethanolamine-binding protein VFU_RS07090 41c652b40d132210046a6de0faf39e0b 178 Pfam PF01161 Phosphatidylethanolamine-binding protein 41 175 1.8E-34 T 21-04-2016 IPR008914 Phosphatidylethanolamine-binding protein VFU_RS07090 41c652b40d132210046a6de0faf39e0b 178 PANTHER PTHR30289:SF0 18 178 1.8E-71 T 21-04-2016 VFU_RS11680 849333ed149912978085778217fc944a 386 Gene3D G3DSA:3.40.50.10770 1 140 6.1E-62 T 21-04-2016 VFU_RS11680 849333ed149912978085778217fc944a 386 Gene3D G3DSA:3.40.1350.10 241 382 2.9E-59 T 21-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 VFU_RS11680 849333ed149912978085778217fc944a 386 Gene3D G3DSA:1.10.10.680 162 240 3.3E-52 T 21-04-2016 VFU_RS11680 849333ed149912978085778217fc944a 386 Pfam PF09002 Domain of unknown function (DUF1887) 1 379 3.1E-166 T 21-04-2016 IPR015093 Protein of unknown function DUF1887 VFU_RS11680 849333ed149912978085778217fc944a 386 SUPERFAMILY SSF52980 1 382 1.97E-119 T 21-04-2016 IPR011335 Restriction endonuclease type II-like VFU_RS13950 14b09909023262c7b5a11cb530df2795 459 SMART SM00382 93 246 1.4E-8 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS13950 14b09909023262c7b5a11cb530df2795 459 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 453 1.5E-223 T 21-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 VFU_RS13950 14b09909023262c7b5a11cb530df2795 459 Gene3D G3DSA:3.30.230.10 286 455 1.4E-37 T 21-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VFU_RS13950 14b09909023262c7b5a11cb530df2795 459 PANTHER PTHR32472 1 453 1.5E-222 T 21-04-2016 VFU_RS13950 14b09909023262c7b5a11cb530df2795 459 SUPERFAMILY SSF54211 305 455 2.81E-42 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VFU_RS13950 14b09909023262c7b5a11cb530df2795 459 SUPERFAMILY SSF54211 257 271 2.81E-42 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VFU_RS13950 14b09909023262c7b5a11cb530df2795 459 PRINTS PR01874 DNA repair protein radA signature 85 113 8.9E-94 T 21-04-2016 VFU_RS13950 14b09909023262c7b5a11cb530df2795 459 PRINTS PR01874 DNA repair protein radA signature 324 347 8.9E-94 T 21-04-2016 VFU_RS13950 14b09909023262c7b5a11cb530df2795 459 PRINTS PR01874 DNA repair protein radA signature 250 276 8.9E-94 T 21-04-2016 VFU_RS13950 14b09909023262c7b5a11cb530df2795 459 PRINTS PR01874 DNA repair protein radA signature 176 200 8.9E-94 T 21-04-2016 VFU_RS13950 14b09909023262c7b5a11cb530df2795 459 PRINTS PR01874 DNA repair protein radA signature 126 143 8.9E-94 T 21-04-2016 VFU_RS13950 14b09909023262c7b5a11cb530df2795 459 PRINTS PR01874 DNA repair protein radA signature 215 243 8.9E-94 T 21-04-2016 VFU_RS13950 14b09909023262c7b5a11cb530df2795 459 PRINTS PR01874 DNA repair protein radA signature 10 34 8.9E-94 T 21-04-2016 VFU_RS13950 14b09909023262c7b5a11cb530df2795 459 Pfam PF13481 AAA domain 71 224 4.5E-15 T 21-04-2016 VFU_RS13950 14b09909023262c7b5a11cb530df2795 459 Gene3D G3DSA:3.40.50.300 62 279 3.7E-50 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS13950 14b09909023262c7b5a11cb530df2795 459 SUPERFAMILY SSF52540 70 291 2.59E-48 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS13950 14b09909023262c7b5a11cb530df2795 459 Pfam PF13541 Subunit ChlI of Mg-chelatase 347 432 4.5E-9 T 21-04-2016 VFU_RS01705 11d9c15335f21a5400956c96ab742581 543 PANTHER PTHR11699:SF168 1 469 5.2E-127 T 21-04-2016 VFU_RS01705 11d9c15335f21a5400956c96ab742581 543 Gene3D G3DSA:3.40.605.10 11 229 2.3E-26 T 21-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 VFU_RS01705 11d9c15335f21a5400956c96ab742581 543 SUPERFAMILY SSF53720 10 451 9.82E-81 T 21-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 VFU_RS01705 11d9c15335f21a5400956c96ab742581 543 TIGRFAM TIGR02518 EutH_ACDH: acetaldehyde dehydrogenase (acetylating) 4 461 3.3E-213 T 21-04-2016 IPR013357 Acetaldehyde dehydrogenase, acetylating VFU_RS01705 11d9c15335f21a5400956c96ab742581 543 PANTHER PTHR11699 1 469 5.2E-127 T 21-04-2016 VFU_RS01705 11d9c15335f21a5400956c96ab742581 543 Gene3D G3DSA:3.40.309.10 230 277 8.3E-23 T 21-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 VFU_RS01705 11d9c15335f21a5400956c96ab742581 543 Gene3D G3DSA:3.40.309.10 314 406 8.3E-23 T 21-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 VFU_RS01705 11d9c15335f21a5400956c96ab742581 543 Pfam PF00171 Aldehyde dehydrogenase family 12 272 8.4E-28 T 21-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 VFU_RS13940 65c3cc9e6516d7e4e29cbade6240d588 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 66 8.1E-18 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS13940 65c3cc9e6516d7e4e29cbade6240d588 310 SUPERFAMILY SSF46785 6 87 1.28E-20 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS13940 65c3cc9e6516d7e4e29cbade6240d588 310 Gene3D G3DSA:1.10.10.10 8 83 2.6E-23 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS13940 65c3cc9e6516d7e4e29cbade6240d588 310 PANTHER PTHR30537:SF26 1 307 1.7E-83 T 21-04-2016 VFU_RS13940 65c3cc9e6516d7e4e29cbade6240d588 310 PANTHER PTHR30537 1 307 1.7E-83 T 21-04-2016 VFU_RS13940 65c3cc9e6516d7e4e29cbade6240d588 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 6.4E-6 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS13940 65c3cc9e6516d7e4e29cbade6240d588 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 6.4E-6 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS13940 65c3cc9e6516d7e4e29cbade6240d588 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 6.4E-6 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS13940 65c3cc9e6516d7e4e29cbade6240d588 310 Pfam PF03466 LysR substrate binding domain 93 289 1.4E-27 T 21-04-2016 IPR005119 LysR, substrate-binding VFU_RS13940 65c3cc9e6516d7e4e29cbade6240d588 310 SUPERFAMILY SSF53850 95 295 9.23E-34 T 21-04-2016 VFU_RS13940 65c3cc9e6516d7e4e29cbade6240d588 310 Gene3D G3DSA:3.40.190.10 95 177 3.0E-30 T 21-04-2016 VFU_RS13940 65c3cc9e6516d7e4e29cbade6240d588 310 Gene3D G3DSA:3.40.190.10 178 257 4.1E-10 T 21-04-2016 VFU_RS07855 7a393b09a2c1c2023c23acf296bd5e06 183 PANTHER PTHR21600 5 109 4.6E-84 T 21-04-2016 VFU_RS07855 7a393b09a2c1c2023c23acf296bd5e06 183 PANTHER PTHR21600 126 182 4.6E-84 T 21-04-2016 VFU_RS07855 7a393b09a2c1c2023c23acf296bd5e06 183 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 12 181 8.4E-57 T 21-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VFU_RS07855 7a393b09a2c1c2023c23acf296bd5e06 183 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 43 57 - T 21-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VFU_RS07855 7a393b09a2c1c2023c23acf296bd5e06 183 PANTHER PTHR21600:SF23 5 109 4.6E-84 T 21-04-2016 VFU_RS07855 7a393b09a2c1c2023c23acf296bd5e06 183 PANTHER PTHR21600:SF23 126 182 4.6E-84 T 21-04-2016 VFU_RS07855 7a393b09a2c1c2023c23acf296bd5e06 183 SUPERFAMILY SSF55120 6 182 9.92E-43 T 21-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS07855 7a393b09a2c1c2023c23acf296bd5e06 183 Pfam PF00849 RNA pseudouridylate synthase 8 151 1.9E-14 T 21-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS11975 b21785d877650deb35bfa427172e3f4f 220 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 5 216 4.3E-78 T 21-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 VFU_RS11975 b21785d877650deb35bfa427172e3f4f 220 PANTHER PTHR34108 1 205 3.1E-60 T 21-04-2016 VFU_RS11975 b21785d877650deb35bfa427172e3f4f 220 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 115 215 2.6E-32 T 21-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 VFU_RS11975 b21785d877650deb35bfa427172e3f4f 220 PANTHER PTHR34108:SF1 1 205 3.1E-60 T 21-04-2016 VFU_RS11975 b21785d877650deb35bfa427172e3f4f 220 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 102 3.7E-32 T 21-04-2016 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 VFU_RS11975 b21785d877650deb35bfa427172e3f4f 220 Gene3D G3DSA:2.160.20.70 101 218 5.8E-39 T 21-04-2016 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 VFU_RS11975 b21785d877650deb35bfa427172e3f4f 220 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 4 219 28.335 T 21-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 VFU_RS11975 b21785d877650deb35bfa427172e3f4f 220 SUPERFAMILY SSF63848 113 216 1.1E-30 T 21-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 VFU_RS07450 e948c814cdf4efbbb623dd2d641190a8 127 Pfam PF04342 Putative member of DMT superfamily (DUF486) 10 114 9.4E-45 T 21-04-2016 IPR007437 Putative member of DMT superfamily VFU_RS07450 e948c814cdf4efbbb623dd2d641190a8 127 PANTHER PTHR38482 2 119 2.6E-54 T 21-04-2016 VFU_RS07450 e948c814cdf4efbbb623dd2d641190a8 127 PIRSF PIRSF021239 4 117 6.6E-53 T 21-04-2016 IPR007437 Putative member of DMT superfamily VFU_RS11570 bdf4e0053577b6300baeb8007fe9e703 515 Pfam PF04293 SpoVR like protein 23 452 4.2E-175 T 21-04-2016 IPR007390 Sporulation stage V, protein R VFU_RS11570 bdf4e0053577b6300baeb8007fe9e703 515 PANTHER PTHR30029 13 515 7.8E-235 T 21-04-2016 VFU_RS11570 bdf4e0053577b6300baeb8007fe9e703 515 PANTHER PTHR30029:SF2 13 515 7.8E-235 T 21-04-2016 VFU_RS18155 eb8887bd094266ee6e96454f7535c4c6 251 SMART SM00267 94 251 2.1E-30 T 21-04-2016 IPR000160 GGDEF domain VFU_RS18155 eb8887bd094266ee6e96454f7535c4c6 251 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 2 97 2.3E-7 T 21-04-2016 IPR000014 PAS domain VFU_RS18155 eb8887bd094266ee6e96454f7535c4c6 251 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 102 250 1.2E-37 T 21-04-2016 IPR000160 GGDEF domain VFU_RS18155 eb8887bd094266ee6e96454f7535c4c6 251 SUPERFAMILY SSF55073 111 250 3.84E-35 T 21-04-2016 IPR029787 Nucleotide cyclase VFU_RS18155 eb8887bd094266ee6e96454f7535c4c6 251 Pfam PF00990 Diguanylate cyclase, GGDEF domain 107 250 2.1E-32 T 21-04-2016 IPR000160 GGDEF domain VFU_RS18155 eb8887bd094266ee6e96454f7535c4c6 251 PANTHER PTHR10799 141 251 4.9E-24 T 21-04-2016 VFU_RS18155 eb8887bd094266ee6e96454f7535c4c6 251 SUPERFAMILY SSF55785 2 103 4.19E-9 T 21-04-2016 IPR000014 PAS domain VFU_RS18155 eb8887bd094266ee6e96454f7535c4c6 251 PANTHER PTHR10799:SF710 141 251 4.9E-24 T 21-04-2016 VFU_RS18155 eb8887bd094266ee6e96454f7535c4c6 251 Gene3D G3DSA:3.30.70.270 107 251 2.7E-39 T 21-04-2016 VFU_RS18155 eb8887bd094266ee6e96454f7535c4c6 251 Gene3D G3DSA:3.30.450.20 2 93 6.2E-10 T 21-04-2016 VFU_RS01690 1716134767f93d594df572f26fdb9be3 1138 Pfam PF01228 Glycine radical 1016 1119 2.9E-24 T 21-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 VFU_RS01690 1716134767f93d594df572f26fdb9be3 1138 ProSitePatterns PS00850 Glycine radical domain signature. 1108 1116 - T 21-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VFU_RS01690 1716134767f93d594df572f26fdb9be3 1138 SUPERFAMILY SSF51998 6 308 5.04E-44 T 21-04-2016 VFU_RS01690 1716134767f93d594df572f26fdb9be3 1138 TIGRFAM TIGR04394 choline_CutC: choline trimethylamine-lyase 350 1138 0.0 T 21-04-2016 IPR030897 Choline trimethylamine-lyase GO:0016829 MetaCyc: PWY-7167|UniPathway: UPA00117 VFU_RS01690 1716134767f93d594df572f26fdb9be3 1138 SUPERFAMILY SSF51998 350 1135 6.87E-233 T 21-04-2016 VFU_RS01690 1716134767f93d594df572f26fdb9be3 1138 PANTHER PTHR30191:SF6 346 1138 2.2E-299 T 21-04-2016 VFU_RS01690 1716134767f93d594df572f26fdb9be3 1138 Gene3D G3DSA:3.20.70.20 4 320 1.5E-56 T 21-04-2016 VFU_RS01690 1716134767f93d594df572f26fdb9be3 1138 Gene3D G3DSA:3.20.70.20 346 1135 5.2E-238 T 21-04-2016 VFU_RS01690 1716134767f93d594df572f26fdb9be3 1138 PANTHER PTHR30191 346 1138 2.2E-299 T 21-04-2016 VFU_RS01690 1716134767f93d594df572f26fdb9be3 1138 Pfam PF02901 Pyruvate formate lyase-like 8 85 4.2E-6 T 21-04-2016 IPR004184 Pyruvate formate lyase domain GO:0003824 VFU_RS01690 1716134767f93d594df572f26fdb9be3 1138 Pfam PF02901 Pyruvate formate lyase-like 104 319 3.2E-41 T 21-04-2016 IPR004184 Pyruvate formate lyase domain GO:0003824 VFU_RS01690 1716134767f93d594df572f26fdb9be3 1138 Pfam PF02901 Pyruvate formate lyase-like 351 999 1.8E-218 T 21-04-2016 IPR004184 Pyruvate formate lyase domain GO:0003824 VFU_RS02700 11f9b8b49229a6fd7e7cd7c00637114d 240 SMART SM00862 156 232 1.0E-20 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VFU_RS02700 11f9b8b49229a6fd7e7cd7c00637114d 240 PANTHER PTHR26402:SF292 5 235 8.9E-113 T 21-04-2016 VFU_RS02700 11f9b8b49229a6fd7e7cd7c00637114d 240 Gene3D G3DSA:3.40.50.2300 2 123 3.9E-41 T 21-04-2016 VFU_RS02700 11f9b8b49229a6fd7e7cd7c00637114d 240 PANTHER PTHR26402 5 235 8.9E-113 T 21-04-2016 VFU_RS02700 11f9b8b49229a6fd7e7cd7c00637114d 240 SMART SM00448 5 116 9.0E-44 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS02700 11f9b8b49229a6fd7e7cd7c00637114d 240 SUPERFAMILY SSF46894 132 234 1.5E-26 T 21-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VFU_RS02700 11f9b8b49229a6fd7e7cd7c00637114d 240 SUPERFAMILY SSF52172 3 127 1.01E-41 T 21-04-2016 IPR011006 CheY-like superfamily VFU_RS02700 11f9b8b49229a6fd7e7cd7c00637114d 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 232 6.1E-22 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VFU_RS02700 11f9b8b49229a6fd7e7cd7c00637114d 240 Gene3D G3DSA:1.10.10.10 134 235 2.0E-31 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS02700 11f9b8b49229a6fd7e7cd7c00637114d 240 Pfam PF00072 Response regulator receiver domain 7 117 3.5E-29 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS06765 ec0d9243a21d7d4aa77182176f9c35d1 243 PANTHER PTHR30435 1 240 3.1E-60 T 21-04-2016 VFU_RS06765 ec0d9243a21d7d4aa77182176f9c35d1 243 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 120 2.1E-31 T 21-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G VFU_RS06765 ec0d9243a21d7d4aa77182176f9c35d1 243 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 169 239 3.5E-16 T 21-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VFU_RS06765 ec0d9243a21d7d4aa77182176f9c35d1 243 PANTHER PTHR30435:SF18 1 240 3.1E-60 T 21-04-2016 VFU_RS06765 ec0d9243a21d7d4aa77182176f9c35d1 243 Pfam PF00460 Flagella basal body rod protein 7 35 1.2E-5 T 21-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VFU_RS06765 ec0d9243a21d7d4aa77182176f9c35d1 243 SUPERFAMILY SSF117143 77 176 1.02E-12 T 21-04-2016 VFU_RS08200 d99971e0c747fdb9fd0834e20aca716b 444 PANTHER PTHR11616:SF167 3 442 2.4E-162 T 21-04-2016 VFU_RS08200 d99971e0c747fdb9fd0834e20aca716b 444 Pfam PF00209 Sodium:neurotransmitter symporter family 144 442 1.3E-25 T 21-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VFU_RS08200 d99971e0c747fdb9fd0834e20aca716b 444 Pfam PF00209 Sodium:neurotransmitter symporter family 6 121 9.8E-20 T 21-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VFU_RS08200 d99971e0c747fdb9fd0834e20aca716b 444 PANTHER PTHR11616 3 442 2.4E-162 T 21-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VFU_RS08200 d99971e0c747fdb9fd0834e20aca716b 444 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 43 62 4.0E-8 T 21-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VFU_RS08200 d99971e0c747fdb9fd0834e20aca716b 444 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 14 35 4.0E-8 T 21-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VFU_RS08200 d99971e0c747fdb9fd0834e20aca716b 444 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 307 326 4.0E-8 T 21-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VFU_RS08200 d99971e0c747fdb9fd0834e20aca716b 444 SUPERFAMILY SSF161070 6 443 1.57E-118 T 21-04-2016 VFU_RS07375 fcc713373ed316d6f86680b879ad816d 524 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 66 433 1.9E-64 T 21-04-2016 IPR000914 Solute-binding protein family 5 domain VFU_RS07375 fcc713373ed316d6f86680b879ad816d 524 PANTHER PTHR30290:SF9 1 515 1.4E-110 T 21-04-2016 VFU_RS07375 fcc713373ed316d6f86680b879ad816d 524 PIRSF PIRSF002741 21 523 4.8E-68 T 21-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VFU_RS07375 fcc713373ed316d6f86680b879ad816d 524 Gene3D G3DSA:3.10.105.10 269 493 2.8E-39 T 21-04-2016 VFU_RS07375 fcc713373ed316d6f86680b879ad816d 524 PANTHER PTHR30290 1 515 1.4E-110 T 21-04-2016 VFU_RS07375 fcc713373ed316d6f86680b879ad816d 524 SUPERFAMILY SSF53850 23 517 1.14E-97 T 21-04-2016 VFU_RS07375 fcc713373ed316d6f86680b879ad816d 524 Gene3D G3DSA:3.40.190.10 124 268 2.2E-28 T 21-04-2016 VFU_RS05950 b50bb68ea2f04512084aedce991f2283 150 PIRSF PIRSF019404 1 146 2.0E-29 T 21-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 VFU_RS05950 b50bb68ea2f04512084aedce991f2283 150 Pfam PF02050 Flagellar FliJ protein 17 140 1.9E-30 T 21-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 VFU_RS05950 b50bb68ea2f04512084aedce991f2283 150 PANTHER PTHR38786 1 147 2.4E-43 T 21-04-2016 VFU_RS05950 b50bb68ea2f04512084aedce991f2283 150 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 3 142 4.4E-34 T 21-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 VFU_RS07400 17c4f58b0c8c8ee7bd5b5198e3576ca7 289 Gene3D G3DSA:3.20.80.10 134 287 7.8E-17 T 21-04-2016 IPR011256 Regulatory factor, effector binding domain VFU_RS07400 17c4f58b0c8c8ee7bd5b5198e3576ca7 289 Gene3D G3DSA:1.10.10.60 4 61 5.1E-20 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS07400 17c4f58b0c8c8ee7bd5b5198e3576ca7 289 SMART SM00342 25 108 1.4E-30 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VFU_RS07400 17c4f58b0c8c8ee7bd5b5198e3576ca7 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 92 108 8.8E-7 T 21-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VFU_RS07400 17c4f58b0c8c8ee7bd5b5198e3576ca7 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 77 92 8.8E-7 T 21-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VFU_RS07400 17c4f58b0c8c8ee7bd5b5198e3576ca7 289 PANTHER PTHR11019 4 116 1.3E-33 T 21-04-2016 VFU_RS07400 17c4f58b0c8c8ee7bd5b5198e3576ca7 289 SUPERFAMILY SSF46689 62 109 1.88E-11 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS07400 17c4f58b0c8c8ee7bd5b5198e3576ca7 289 SUPERFAMILY SSF55136 210 287 1.6E-17 T 21-04-2016 IPR011256 Regulatory factor, effector binding domain VFU_RS07400 17c4f58b0c8c8ee7bd5b5198e3576ca7 289 SUPERFAMILY SSF46689 9 59 4.48E-11 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS07400 17c4f58b0c8c8ee7bd5b5198e3576ca7 289 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 62 104 - T 21-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VFU_RS07400 17c4f58b0c8c8ee7bd5b5198e3576ca7 289 Pfam PF06445 GyrI-like small molecule binding domain 201 286 2.9E-13 T 21-04-2016 IPR029442 GyrI-like small molecule binding domain VFU_RS07400 17c4f58b0c8c8ee7bd5b5198e3576ca7 289 Gene3D G3DSA:1.10.10.60 62 112 1.1E-17 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS07400 17c4f58b0c8c8ee7bd5b5198e3576ca7 289 Pfam PF12833 Helix-turn-helix domain 31 109 7.6E-23 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VFU_RS07400 17c4f58b0c8c8ee7bd5b5198e3576ca7 289 SMART SM00871 136 287 2.0E-13 T 21-04-2016 IPR010499 Bacterial transcription activator, effector binding VFU_RS01985 4917c6c1b298be3850f0bc6a13b9937c 399 ProSitePatterns PS00216 Sugar transport proteins signature 1. 67 83 - T 21-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 VFU_RS01985 4917c6c1b298be3850f0bc6a13b9937c 399 PANTHER PTHR23502:SF19 14 390 1.2E-114 T 21-04-2016 VFU_RS01985 4917c6c1b298be3850f0bc6a13b9937c 399 SUPERFAMILY SSF103473 11 390 1.57E-58 T 21-04-2016 IPR020846 Major facilitator superfamily domain VFU_RS01985 4917c6c1b298be3850f0bc6a13b9937c 399 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 11 385 2.6E-70 T 21-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 VFU_RS01985 4917c6c1b298be3850f0bc6a13b9937c 399 PANTHER PTHR23502 14 390 1.2E-114 T 21-04-2016 VFU_RS01985 4917c6c1b298be3850f0bc6a13b9937c 399 Pfam PF07690 Major Facilitator Superfamily 18 354 1.2E-47 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VFU_RS01985 4917c6c1b298be3850f0bc6a13b9937c 399 Gene3D G3DSA:1.20.1250.20 212 384 3.2E-8 T 21-04-2016 VFU_RS01985 4917c6c1b298be3850f0bc6a13b9937c 399 Gene3D G3DSA:1.20.1250.20 13 196 4.5E-33 T 21-04-2016 VFU_RS14775 ed5b8a5aa5041f0d06614a5716b6796e 387 Gene3D G3DSA:3.40.50.1260 5 174 4.4E-65 T 21-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VFU_RS14775 ed5b8a5aa5041f0d06614a5716b6796e 387 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 21-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VFU_RS14775 ed5b8a5aa5041f0d06614a5716b6796e 387 PANTHER PTHR11406 1 387 7.1E-197 T 21-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VFU_RS14775 ed5b8a5aa5041f0d06614a5716b6796e 387 Pfam PF00162 Phosphoglycerate kinase 6 373 4.1E-137 T 21-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VFU_RS14775 ed5b8a5aa5041f0d06614a5716b6796e 387 Gene3D G3DSA:3.40.50.1270 175 371 7.0E-79 T 21-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VFU_RS14775 ed5b8a5aa5041f0d06614a5716b6796e 387 SUPERFAMILY SSF53748 3 382 7.89E-145 T 21-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VFU_RS14775 ed5b8a5aa5041f0d06614a5716b6796e 387 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 2.5E-83 T 21-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VFU_RS14775 ed5b8a5aa5041f0d06614a5716b6796e 387 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 2.5E-83 T 21-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VFU_RS14775 ed5b8a5aa5041f0d06614a5716b6796e 387 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 2.5E-83 T 21-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VFU_RS14775 ed5b8a5aa5041f0d06614a5716b6796e 387 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 2.5E-83 T 21-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VFU_RS14775 ed5b8a5aa5041f0d06614a5716b6796e 387 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 2.5E-83 T 21-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VFU_RS14775 ed5b8a5aa5041f0d06614a5716b6796e 387 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 2.5E-83 T 21-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VFU_RS14775 ed5b8a5aa5041f0d06614a5716b6796e 387 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 2.5E-83 T 21-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VFU_RS14775 ed5b8a5aa5041f0d06614a5716b6796e 387 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 2.5E-83 T 21-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VFU_RS14775 ed5b8a5aa5041f0d06614a5716b6796e 387 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 2.5E-83 T 21-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VFU_RS14775 ed5b8a5aa5041f0d06614a5716b6796e 387 PIRSF PIRSF000724 1 387 1.1E-134 T 21-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VFU_RS14775 ed5b8a5aa5041f0d06614a5716b6796e 387 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 38.431 T 21-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VFU_RS08405 788f869543c8e3a6569779145d7e5b3e 223 SMART SM00382 30 218 2.7E-10 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS08405 788f869543c8e3a6569779145d7e5b3e 223 Pfam PF00005 ABC transporter 21 167 9.6E-31 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS08405 788f869543c8e3a6569779145d7e5b3e 223 PANTHER PTHR24220 3 217 6.6E-106 T 21-04-2016 VFU_RS08405 788f869543c8e3a6569779145d7e5b3e 223 Gene3D G3DSA:3.40.50.300 1 217 1.1E-58 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS08405 788f869543c8e3a6569779145d7e5b3e 223 SUPERFAMILY SSF52540 1 218 5.58E-60 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS08405 788f869543c8e3a6569779145d7e5b3e 223 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS08405 788f869543c8e3a6569779145d7e5b3e 223 PANTHER PTHR24220:SF430 3 217 6.6E-106 T 21-04-2016 VFU_RS05365 422897b88f7befbe9e883261c7c9efbc 252 Gene3D G3DSA:3.60.15.10 4 252 1.3E-85 T 21-04-2016 IPR001279 Metallo-beta-lactamase VFU_RS05365 422897b88f7befbe9e883261c7c9efbc 252 PIRSF PIRSF005457 1 252 6.6E-97 T 21-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 VFU_RS05365 422897b88f7befbe9e883261c7c9efbc 252 Pfam PF00753 Metallo-beta-lactamase superfamily 14 166 5.0E-20 T 21-04-2016 IPR001279 Metallo-beta-lactamase VFU_RS05365 422897b88f7befbe9e883261c7c9efbc 252 PANTHER PTHR11935 1 252 4.1E-97 T 21-04-2016 VFU_RS05365 422897b88f7befbe9e883261c7c9efbc 252 PANTHER PTHR11935:SF7 1 252 4.1E-97 T 21-04-2016 VFU_RS05365 422897b88f7befbe9e883261c7c9efbc 252 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 252 3.9E-103 T 21-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 VFU_RS05365 422897b88f7befbe9e883261c7c9efbc 252 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 167 252 2.6E-24 T 21-04-2016 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 VFU_RS05365 422897b88f7befbe9e883261c7c9efbc 252 SMART SM00849 12 166 6.8E-35 T 21-04-2016 IPR001279 Metallo-beta-lactamase VFU_RS05365 422897b88f7befbe9e883261c7c9efbc 252 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 252 44.974 T 21-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 VFU_RS05365 422897b88f7befbe9e883261c7c9efbc 252 SUPERFAMILY SSF56281 3 252 3.28E-70 T 21-04-2016 IPR001279 Metallo-beta-lactamase VFU_RS15385 4c790723516754e2f122421683fcf1d2 311 Pfam PF00009 Elongation factor Tu GTP binding domain 1 118 4.9E-28 T 21-04-2016 VFU_RS15385 4c790723516754e2f122421683fcf1d2 311 Gene3D G3DSA:3.40.50.300 1 128 3.9E-37 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS15385 4c790723516754e2f122421683fcf1d2 311 PANTHER PTHR23115 1 310 2.6E-222 T 21-04-2016 VFU_RS15385 4c790723516754e2f122421683fcf1d2 311 PANTHER PTHR23115:SF151 1 310 2.6E-222 T 21-04-2016 VFU_RS15385 4c790723516754e2f122421683fcf1d2 311 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 310 6.9E-180 T 21-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 VFU_RS15385 4c790723516754e2f122421683fcf1d2 311 Pfam PF03144 Elongation factor Tu domain 2 142 210 6.9E-17 T 21-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 VFU_RS15385 4c790723516754e2f122421683fcf1d2 311 SUPERFAMILY SSF50447 122 218 2.95E-30 T 21-04-2016 IPR009000 Translation protein, beta-barrel domain VFU_RS15385 4c790723516754e2f122421683fcf1d2 311 PRINTS PR00315 GTP-binding elongation factor signature 11 22 8.2E-5 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VFU_RS15385 4c790723516754e2f122421683fcf1d2 311 PRINTS PR00315 GTP-binding elongation factor signature 48 57 8.2E-5 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VFU_RS15385 4c790723516754e2f122421683fcf1d2 311 Pfam PF03143 Elongation factor Tu C-terminal domain 215 309 1.1E-33 T 21-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal VFU_RS15385 4c790723516754e2f122421683fcf1d2 311 SUPERFAMILY SSF52540 1 136 7.9E-34 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS15385 4c790723516754e2f122421683fcf1d2 311 Gene3D G3DSA:2.40.30.10 217 310 3.3E-47 T 21-04-2016 VFU_RS15385 4c790723516754e2f122421683fcf1d2 311 SUPERFAMILY SSF50465 215 310 1.3E-35 T 21-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VFU_RS15385 4c790723516754e2f122421683fcf1d2 311 Gene3D G3DSA:2.40.30.10 129 215 8.1E-36 T 21-04-2016 VFU_RS02195 357737357291c46715cbafc0cdfc77c9 393 SUPERFAMILY SSF48452 306 389 9.21E-11 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VFU_RS02195 357737357291c46715cbafc0cdfc77c9 393 Gene3D G3DSA:1.25.40.10 311 389 4.9E-11 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VFU_RS02195 357737357291c46715cbafc0cdfc77c9 393 PANTHER PTHR23083 257 389 1.9E-98 T 21-04-2016 VFU_RS02195 357737357291c46715cbafc0cdfc77c9 393 PANTHER PTHR23083 1 219 1.9E-98 T 21-04-2016 VFU_RS02195 357737357291c46715cbafc0cdfc77c9 393 SMART SM00028 327 360 0.0053 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VFU_RS02195 357737357291c46715cbafc0cdfc77c9 393 PANTHER PTHR23083:SF396 257 389 1.9E-98 T 21-04-2016 VFU_RS02195 357737357291c46715cbafc0cdfc77c9 393 PANTHER PTHR23083:SF396 1 219 1.9E-98 T 21-04-2016 VFU_RS02195 357737357291c46715cbafc0cdfc77c9 393 SUPERFAMILY SSF48452 85 209 7.17E-6 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VFU_RS02195 357737357291c46715cbafc0cdfc77c9 393 Pfam PF07219 HemY protein N-terminus 26 132 9.6E-27 T 21-04-2016 IPR010817 HemY, N-terminal UniPathway: UPA00252 VFU_RS02195 357737357291c46715cbafc0cdfc77c9 393 Pfam PF07719 Tetratricopeptide repeat 327 356 1.9E-5 T 21-04-2016 IPR013105 Tetratricopeptide repeat 2 VFU_RS02195 357737357291c46715cbafc0cdfc77c9 393 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 3 386 2.7E-117 T 21-04-2016 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 UniPathway: UPA00252 VFU_RS02195 357737357291c46715cbafc0cdfc77c9 393 Gene3D G3DSA:1.25.40.10 85 204 4.9E-5 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VFU_RS01715 4f5652d8023810aca79a86f97c86238b 94 PANTHER PTHR33941 1 87 2.4E-39 T 21-04-2016 VFU_RS01715 4f5652d8023810aca79a86f97c86238b 94 SUPERFAMILY SSF143414 3 90 2.75E-31 T 21-04-2016 VFU_RS01715 4f5652d8023810aca79a86f97c86238b 94 SMART SM00877 3 79 5.6E-36 T 21-04-2016 IPR000249 Microcompartment protein, bacteria VFU_RS01715 4f5652d8023810aca79a86f97c86238b 94 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 2 65 4.0E-20 T 21-04-2016 VFU_RS01715 4f5652d8023810aca79a86f97c86238b 94 Pfam PF00936 BMC domain 4 79 1.0E-28 T 21-04-2016 IPR000249 Microcompartment protein, bacteria VFU_RS01715 4f5652d8023810aca79a86f97c86238b 94 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 21 40 - T 21-04-2016 IPR020808 Bacterial microcompartments protein, conserved site VFU_RS06475 1fd830fb8d476597a2f4caaef6a2c298 316 SMART SM00363 20 77 3.2E-7 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VFU_RS06475 1fd830fb8d476597a2f4caaef6a2c298 316 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 142 156 - T 21-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS06475 1fd830fb8d476597a2f4caaef6a2c298 316 PANTHER PTHR11079 4 79 1.3E-155 T 21-04-2016 VFU_RS06475 1fd830fb8d476597a2f4caaef6a2c298 316 PANTHER PTHR11079 96 316 1.3E-155 T 21-04-2016 VFU_RS06475 1fd830fb8d476597a2f4caaef6a2c298 316 SUPERFAMILY SSF55174 19 70 1.07E-8 T 21-04-2016 VFU_RS06475 1fd830fb8d476597a2f4caaef6a2c298 316 Pfam PF01479 S4 domain 20 66 9.9E-10 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VFU_RS06475 1fd830fb8d476597a2f4caaef6a2c298 316 Gene3D G3DSA:3.10.290.10 20 68 1.2E-7 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VFU_RS06475 1fd830fb8d476597a2f4caaef6a2c298 316 PANTHER PTHR11079:SF84 4 79 1.3E-155 T 21-04-2016 VFU_RS06475 1fd830fb8d476597a2f4caaef6a2c298 316 PANTHER PTHR11079:SF84 96 316 1.3E-155 T 21-04-2016 VFU_RS06475 1fd830fb8d476597a2f4caaef6a2c298 316 Pfam PF00849 RNA pseudouridylate synthase 103 248 8.7E-32 T 21-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS06475 1fd830fb8d476597a2f4caaef6a2c298 316 SUPERFAMILY SSF55120 92 313 2.56E-66 T 21-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS06475 1fd830fb8d476597a2f4caaef6a2c298 316 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 313 3.2E-92 T 21-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS01625 d8d1974fedf08ccbaf6ba3f843e8d87e 468 Gene3D G3DSA:1.10.8.60 299 366 9.3E-32 T 21-04-2016 VFU_RS01625 d8d1974fedf08ccbaf6ba3f843e8d87e 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 166 186 1.7E-54 T 21-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like VFU_RS01625 d8d1974fedf08ccbaf6ba3f843e8d87e 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 198 212 1.7E-54 T 21-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like VFU_RS01625 d8d1974fedf08ccbaf6ba3f843e8d87e 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 230 244 1.7E-54 T 21-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like VFU_RS01625 d8d1974fedf08ccbaf6ba3f843e8d87e 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 264 291 1.7E-54 T 21-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like VFU_RS01625 d8d1974fedf08ccbaf6ba3f843e8d87e 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 426 445 1.7E-54 T 21-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like VFU_RS01625 d8d1974fedf08ccbaf6ba3f843e8d87e 468 SUPERFAMILY SSF48295 364 467 7.85E-38 T 21-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 VFU_RS01625 d8d1974fedf08ccbaf6ba3f843e8d87e 468 Pfam PF11638 DnaA N-terminal domain 4 64 2.6E-18 T 21-04-2016 IPR024633 DnaA N-terminal domain VFU_RS01625 d8d1974fedf08ccbaf6ba3f843e8d87e 468 PANTHER PTHR30050:SF2 131 468 6.6E-246 T 21-04-2016 VFU_RS01625 d8d1974fedf08ccbaf6ba3f843e8d87e 468 Gene3D G3DSA:1.10.1750.10 367 467 1.6E-42 T 21-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 VFU_RS01625 d8d1974fedf08ccbaf6ba3f843e8d87e 468 PANTHER PTHR30050:SF2 1 104 6.6E-246 T 21-04-2016 VFU_RS01625 d8d1974fedf08ccbaf6ba3f843e8d87e 468 ProSitePatterns PS01008 DnaA protein signature. 426 445 - T 21-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 VFU_RS01625 d8d1974fedf08ccbaf6ba3f843e8d87e 468 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 377 445 3.6E-32 T 21-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 VFU_RS01625 d8d1974fedf08ccbaf6ba3f843e8d87e 468 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 467 34.523 T 21-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 VFU_RS01625 d8d1974fedf08ccbaf6ba3f843e8d87e 468 SMART SM00760 376 445 9.0E-45 T 21-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 VFU_RS01625 d8d1974fedf08ccbaf6ba3f843e8d87e 468 PANTHER PTHR30050 131 468 6.6E-246 T 21-04-2016 VFU_RS01625 d8d1974fedf08ccbaf6ba3f843e8d87e 468 SMART SM00382 165 378 4.5E-7 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS01625 d8d1974fedf08ccbaf6ba3f843e8d87e 468 Pfam PF00308 Bacterial dnaA protein 134 350 1.6E-98 T 21-04-2016 IPR013317 Chromosomal replication initiator protein DnaA VFU_RS01625 d8d1974fedf08ccbaf6ba3f843e8d87e 468 PANTHER PTHR30050 1 104 6.6E-246 T 21-04-2016 VFU_RS01625 d8d1974fedf08ccbaf6ba3f843e8d87e 468 SUPERFAMILY SSF52540 133 344 3.6E-45 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS01625 d8d1974fedf08ccbaf6ba3f843e8d87e 468 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 466 5.7E-187 T 21-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 VFU_RS01625 d8d1974fedf08ccbaf6ba3f843e8d87e 468 Gene3D G3DSA:3.40.50.300 123 297 2.2E-62 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS08980 74c915055a2b9bbb5029555248fef063 252 Gene3D G3DSA:1.10.10.10 2 59 1.7E-12 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS08980 74c915055a2b9bbb5029555248fef063 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 1.1E-15 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VFU_RS08980 74c915055a2b9bbb5029555248fef063 252 SMART SM01134 73 234 1.4E-56 T 21-04-2016 VFU_RS08980 74c915055a2b9bbb5029555248fef063 252 PANTHER PTHR30363 1 252 3.9E-91 T 21-04-2016 VFU_RS08980 74c915055a2b9bbb5029555248fef063 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 25 39 1.2E-7 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VFU_RS08980 74c915055a2b9bbb5029555248fef063 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 39 57 1.2E-7 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VFU_RS08980 74c915055a2b9bbb5029555248fef063 252 PANTHER PTHR30363:SF1 1 252 3.9E-91 T 21-04-2016 VFU_RS08980 74c915055a2b9bbb5029555248fef063 252 SUPERFAMILY SSF100950 74 233 5.58E-25 T 21-04-2016 VFU_RS08980 74c915055a2b9bbb5029555248fef063 252 SUPERFAMILY SSF46785 3 76 1.86E-13 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS08980 74c915055a2b9bbb5029555248fef063 252 SMART SM00420 6 59 1.1E-13 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VFU_RS08980 74c915055a2b9bbb5029555248fef063 252 Pfam PF00455 DeoR C terminal sensor domain 75 232 7.2E-45 T 21-04-2016 IPR014036 DeoR C-terminal sensor domain VFU_RS08980 74c915055a2b9bbb5029555248fef063 252 Gene3D G3DSA:3.30.750.70 78 134 4.7E-13 T 21-04-2016 VFU_RS09550 9030c0584339d6d3feb4087d5ee2f3f3 212 PANTHER PTHR30086:SF2 1 212 2.1E-94 T 21-04-2016 VFU_RS09550 9030c0584339d6d3feb4087d5ee2f3f3 212 PANTHER PTHR30086 1 212 2.1E-94 T 21-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VFU_RS09550 9030c0584339d6d3feb4087d5ee2f3f3 212 Pfam PF01810 LysE type translocator 15 208 3.3E-31 T 21-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VFU_RS09550 9030c0584339d6d3feb4087d5ee2f3f3 212 PIRSF PIRSF006324 1 210 5.0E-53 T 21-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VFU_RS07925 f2ba81c84d894051d717eb99098b977e 876 SMART SM00437 280 534 1.5E-121 T 21-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 VFU_RS07925 f2ba81c84d894051d717eb99098b977e 876 Gene3D G3DSA:3.40.50.140 1 171 9.9E-57 T 21-04-2016 IPR006171 Toprim domain VFU_RS07925 f2ba81c84d894051d717eb99098b977e 876 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 317 331 - T 21-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 VFU_RS07925 f2ba81c84d894051d717eb99098b977e 876 Gene3D G3DSA:2.20.25.10 814 871 8.4E-29 T 21-04-2016 VFU_RS07925 f2ba81c84d894051d717eb99098b977e 876 Pfam PF01131 DNA topoisomerase 165 572 8.6E-128 T 21-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VFU_RS07925 f2ba81c84d894051d717eb99098b977e 876 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 729 54.763 T 21-04-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 VFU_RS07925 f2ba81c84d894051d717eb99098b977e 876 PANTHER PTHR11390:SF27 1 37 0.0 T 21-04-2016 VFU_RS07925 f2ba81c84d894051d717eb99098b977e 876 PANTHER PTHR11390:SF27 76 782 0.0 T 21-04-2016 VFU_RS07925 f2ba81c84d894051d717eb99098b977e 876 SMART SM00436 141 229 1.9E-48 T 21-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 VFU_RS07925 f2ba81c84d894051d717eb99098b977e 876 SUPERFAMILY SSF56712 3 616 1.44E-199 T 21-04-2016 IPR023405 DNA topoisomerase, type IA, core domain VFU_RS07925 f2ba81c84d894051d717eb99098b977e 876 SUPERFAMILY SSF57783 706 748 2.38E-5 T 21-04-2016 VFU_RS07925 f2ba81c84d894051d717eb99098b977e 876 Pfam PF01751 Toprim domain 5 150 9.9E-32 T 21-04-2016 IPR006171 Toprim domain VFU_RS07925 f2ba81c84d894051d717eb99098b977e 876 PANTHER PTHR11390 1 37 0.0 T 21-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VFU_RS07925 f2ba81c84d894051d717eb99098b977e 876 PANTHER PTHR11390 76 782 0.0 T 21-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VFU_RS07925 f2ba81c84d894051d717eb99098b977e 876 Gene3D G3DSA:2.70.20.10 221 342 4.7E-35 T 21-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 VFU_RS07925 f2ba81c84d894051d717eb99098b977e 876 Gene3D G3DSA:2.70.20.10 346 480 1.7E-32 T 21-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 VFU_RS07925 f2ba81c84d894051d717eb99098b977e 876 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 714 751 4.1E-9 T 21-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 VFU_RS07925 f2ba81c84d894051d717eb99098b977e 876 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 605 629 1.3E-4 T 21-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 VFU_RS07925 f2ba81c84d894051d717eb99098b977e 876 SMART SM00493 3 140 3.6E-31 T 21-04-2016 IPR006171 Toprim domain VFU_RS07925 f2ba81c84d894051d717eb99098b977e 876 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 641 1.1E-249 T 21-04-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 VFU_RS07925 f2ba81c84d894051d717eb99098b977e 876 Gene3D G3DSA:3.30.65.10 751 812 1.3E-26 T 21-04-2016 VFU_RS07925 f2ba81c84d894051d717eb99098b977e 876 Gene3D G3DSA:3.30.65.10 594 630 2.1E-10 T 21-04-2016 VFU_RS07925 f2ba81c84d894051d717eb99098b977e 876 Gene3D G3DSA:3.30.65.10 713 749 2.4E-9 T 21-04-2016 VFU_RS07925 f2ba81c84d894051d717eb99098b977e 876 SUPERFAMILY SSF57783 815 871 3.23E-21 T 21-04-2016 VFU_RS07925 f2ba81c84d894051d717eb99098b977e 876 SUPERFAMILY SSF57783 750 813 6.12E-20 T 21-04-2016 VFU_RS07925 f2ba81c84d894051d717eb99098b977e 876 Pfam PF08272 Topoisomerase I zinc-ribbon-like 830 869 2.2E-18 T 21-04-2016 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 VFU_RS07925 f2ba81c84d894051d717eb99098b977e 876 Pfam PF08272 Topoisomerase I zinc-ribbon-like 763 799 7.6E-11 T 21-04-2016 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 VFU_RS07925 f2ba81c84d894051d717eb99098b977e 876 Gene3D G3DSA:1.10.460.10 172 219 2.1E-59 T 21-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VFU_RS07925 f2ba81c84d894051d717eb99098b977e 876 Gene3D G3DSA:1.10.460.10 481 585 2.1E-59 T 21-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VFU_RS07925 f2ba81c84d894051d717eb99098b977e 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 322 331 2.5E-35 T 21-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VFU_RS07925 f2ba81c84d894051d717eb99098b977e 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 114 127 2.5E-35 T 21-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VFU_RS07925 f2ba81c84d894051d717eb99098b977e 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 398 414 2.5E-35 T 21-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VFU_RS07925 f2ba81c84d894051d717eb99098b977e 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 497 511 2.5E-35 T 21-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VFU_RS07925 f2ba81c84d894051d717eb99098b977e 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 199 217 2.5E-35 T 21-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VFU_RS05285 2e4750d2f7a6ad266b2fe053d258e13f 452 PANTHER PTHR22939:SF78 137 452 8.5E-96 T 21-04-2016 VFU_RS05285 2e4750d2f7a6ad266b2fe053d258e13f 452 SMART SM00228 212 281 1.3E-4 T 21-04-2016 IPR001478 PDZ domain GO:0005515 VFU_RS05285 2e4750d2f7a6ad266b2fe053d258e13f 452 SMART SM00228 115 186 0.12 T 21-04-2016 IPR001478 PDZ domain GO:0005515 VFU_RS05285 2e4750d2f7a6ad266b2fe053d258e13f 452 PANTHER PTHR22939 137 452 8.5E-96 T 21-04-2016 VFU_RS05285 2e4750d2f7a6ad266b2fe053d258e13f 452 SUPERFAMILY SSF50156 91 186 9.73E-12 T 21-04-2016 IPR001478 PDZ domain GO:0005515 VFU_RS05285 2e4750d2f7a6ad266b2fe053d258e13f 452 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 4 452 1.3E-135 T 21-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 VFU_RS05285 2e4750d2f7a6ad266b2fe053d258e13f 452 Gene3D G3DSA:2.30.42.10 201 291 2.6E-16 T 21-04-2016 IPR001478 PDZ domain GO:0005515 VFU_RS05285 2e4750d2f7a6ad266b2fe053d258e13f 452 Gene3D G3DSA:2.30.42.10 95 183 2.7E-12 T 21-04-2016 IPR001478 PDZ domain GO:0005515 VFU_RS05285 2e4750d2f7a6ad266b2fe053d258e13f 452 Pfam PF02163 Peptidase family M50 11 440 3.0E-86 T 21-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 VFU_RS05285 2e4750d2f7a6ad266b2fe053d258e13f 452 SUPERFAMILY SSF50156 197 291 1.09E-15 T 21-04-2016 IPR001478 PDZ domain GO:0005515 VFU_RS05285 2e4750d2f7a6ad266b2fe053d258e13f 452 Pfam PF13180 PDZ domain 228 288 7.8E-7 T 21-04-2016 IPR001478 PDZ domain GO:0005515 VFU_RS13985 cdac39e4878c541bb6dc4d9207a8c71a 259 PANTHER PTHR10889:SF3 5 254 1.5E-118 T 21-04-2016 VFU_RS13985 cdac39e4878c541bb6dc4d9207a8c71a 259 Pfam PF01791 DeoC/LacD family aldolase 11 239 3.0E-47 T 21-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 VFU_RS13985 cdac39e4878c541bb6dc4d9207a8c71a 259 SUPERFAMILY SSF51569 6 246 1.99E-82 T 21-04-2016 VFU_RS13985 cdac39e4878c541bb6dc4d9207a8c71a 259 SMART SM01133 10 245 1.7E-80 T 21-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 VFU_RS13985 cdac39e4878c541bb6dc4d9207a8c71a 259 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 231 1.8E-80 T 21-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 VFU_RS13985 cdac39e4878c541bb6dc4d9207a8c71a 259 PANTHER PTHR10889 5 254 1.5E-118 T 21-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 VFU_RS13985 cdac39e4878c541bb6dc4d9207a8c71a 259 PIRSF PIRSF001357 5 253 7.5E-77 T 21-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 VFU_RS13985 cdac39e4878c541bb6dc4d9207a8c71a 259 Gene3D G3DSA:3.20.20.70 3 249 6.4E-92 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS13985 cdac39e4878c541bb6dc4d9207a8c71a 259 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 259 53.011 T 21-04-2016 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 VFU_RS10980 f26c08950eef94f31f6247bc42ec35dc 116 Pfam PF02049 Flagellar hook-basal body complex protein FliE 42 116 2.0E-18 T 21-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VFU_RS10980 f26c08950eef94f31f6247bc42ec35dc 116 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 15 116 13.382 T 21-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VFU_RS01170 96eef271721956303b1c29a6ec05f8c5 584 PANTHER PTHR11686 1 583 6.3E-285 T 21-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VFU_RS01170 96eef271721956303b1c29a6ec05f8c5 584 Pfam PF01019 Gamma-glutamyltranspeptidase 64 579 2.1E-160 T 21-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VFU_RS01170 96eef271721956303b1c29a6ec05f8c5 584 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 50 576 1.4E-132 T 21-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VFU_RS01170 96eef271721956303b1c29a6ec05f8c5 584 SUPERFAMILY SSF56235 41 583 1.43E-168 T 21-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VFU_RS01170 96eef271721956303b1c29a6ec05f8c5 584 PANTHER PTHR11686:SF27 1 583 6.3E-285 T 21-04-2016 VFU_RS01170 96eef271721956303b1c29a6ec05f8c5 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 266 282 2.3E-61 T 21-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VFU_RS01170 96eef271721956303b1c29a6ec05f8c5 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 463 478 2.3E-61 T 21-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VFU_RS01170 96eef271721956303b1c29a6ec05f8c5 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 487 504 2.3E-61 T 21-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VFU_RS01170 96eef271721956303b1c29a6ec05f8c5 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 164 183 2.3E-61 T 21-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VFU_RS01170 96eef271721956303b1c29a6ec05f8c5 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 405 423 2.3E-61 T 21-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VFU_RS01170 96eef271721956303b1c29a6ec05f8c5 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 71 96 2.3E-61 T 21-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VFU_RS01170 96eef271721956303b1c29a6ec05f8c5 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 146 164 2.3E-61 T 21-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VFU_RS01170 96eef271721956303b1c29a6ec05f8c5 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 427 445 2.3E-61 T 21-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VFU_RS01170 96eef271721956303b1c29a6ec05f8c5 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 296 315 2.3E-61 T 21-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VFU_RS09830 5463a5bb8927d2f36a7235b5cbd5b58e 91 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 21-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VFU_RS09830 5463a5bb8927d2f36a7235b5cbd5b58e 91 Pfam PF00708 Acylphosphatase 7 90 1.5E-22 T 21-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VFU_RS09830 5463a5bb8927d2f36a7235b5cbd5b58e 91 PANTHER PTHR10029 2 91 7.6E-23 T 21-04-2016 VFU_RS09830 5463a5bb8927d2f36a7235b5cbd5b58e 91 SUPERFAMILY SSF54975 2 90 8.29E-26 T 21-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VFU_RS09830 5463a5bb8927d2f36a7235b5cbd5b58e 91 Gene3D G3DSA:3.30.70.100 7 90 7.6E-27 T 21-04-2016 VFU_RS09830 5463a5bb8927d2f36a7235b5cbd5b58e 91 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 21-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VFU_RS04500 4b3b3e6fdb9a919d5a59767f9e10a280 340 SUPERFAMILY SSF53335 153 337 1.6E-25 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS04500 4b3b3e6fdb9a919d5a59767f9e10a280 340 PANTHER PTHR18895:SF70 78 336 2.2E-112 T 21-04-2016 VFU_RS04500 4b3b3e6fdb9a919d5a59767f9e10a280 340 Gene3D G3DSA:3.40.50.150 169 337 3.5E-22 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS04500 4b3b3e6fdb9a919d5a59767f9e10a280 340 Pfam PF05175 Methyltransferase small domain 172 336 2.2E-59 T 21-04-2016 IPR007848 Methyltransferase small domain GO:0008168 VFU_RS04500 4b3b3e6fdb9a919d5a59767f9e10a280 340 PANTHER PTHR18895 78 336 2.2E-112 T 21-04-2016 VFU_RS04500 4b3b3e6fdb9a919d5a59767f9e10a280 340 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 269 275 - T 21-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VFU_RS04500 4b3b3e6fdb9a919d5a59767f9e10a280 340 Pfam PF08468 Methyltransferase small domain N-terminal 8 163 1.3E-55 T 21-04-2016 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VFU_RS04500 4b3b3e6fdb9a919d5a59767f9e10a280 340 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 340 45.951 T 21-04-2016 IPR023543 rRNA small subunit methyltransferase C GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VFU_RS10900 2ad7b281b003f3e3a790b0fa24c96b3a 231 SUPERFAMILY SSF88659 98 165 1.0E-9 T 21-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS10900 2ad7b281b003f3e3a790b0fa24c96b3a 231 Pfam PF04545 Sigma-70, region 4 178 225 6.9E-7 T 21-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS10900 2ad7b281b003f3e3a790b0fa24c96b3a 231 SUPERFAMILY SSF88946 22 95 2.75E-7 T 21-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS10900 2ad7b281b003f3e3a790b0fa24c96b3a 231 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 24 228 7.5E-17 T 21-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS10900 2ad7b281b003f3e3a790b0fa24c96b3a 231 Gene3D G3DSA:1.10.10.10 172 230 1.7E-7 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS10900 2ad7b281b003f3e3a790b0fa24c96b3a 231 Gene3D G3DSA:1.10.10.10 99 143 8.4E-8 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS10900 2ad7b281b003f3e3a790b0fa24c96b3a 231 SUPERFAMILY SSF88659 150 229 1.18E-9 T 21-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS08880 00714f21528699dad74068b976e54804 865 PANTHER PTHR11670:SF43 1 682 0.0 T 21-04-2016 VFU_RS08880 00714f21528699dad74068b976e54804 865 PANTHER PTHR11670:SF43 725 865 0.0 T 21-04-2016 VFU_RS08880 00714f21528699dad74068b976e54804 865 SUPERFAMILY SSF53732 12 599 9.29E-186 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS08880 00714f21528699dad74068b976e54804 865 Gene3D G3DSA:3.30.499.10 366 552 1.2E-55 T 21-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS08880 00714f21528699dad74068b976e54804 865 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 37 861 1.7E-288 T 21-04-2016 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 VFU_RS08880 00714f21528699dad74068b976e54804 865 Gene3D G3DSA:3.20.19.10 611 862 7.5E-64 T 21-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VFU_RS08880 00714f21528699dad74068b976e54804 865 Pfam PF00694 Aconitase C-terminal domain 662 793 7.1E-31 T 21-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS08880 00714f21528699dad74068b976e54804 865 SUPERFAMILY SSF52016 604 862 2.94E-68 T 21-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VFU_RS08880 00714f21528699dad74068b976e54804 865 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 8 864 0.0 T 21-04-2016 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|UniPathway: UPA00946 VFU_RS08880 00714f21528699dad74068b976e54804 865 PRINTS PR00415 Aconitase family signature 470 483 1.2E-25 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS08880 00714f21528699dad74068b976e54804 865 PRINTS PR00415 Aconitase family signature 168 176 1.2E-25 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS08880 00714f21528699dad74068b976e54804 865 PRINTS PR00415 Aconitase family signature 197 210 1.2E-25 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS08880 00714f21528699dad74068b976e54804 865 PRINTS PR00415 Aconitase family signature 366 380 1.2E-25 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS08880 00714f21528699dad74068b976e54804 865 PRINTS PR00415 Aconitase family signature 408 419 1.2E-25 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS08880 00714f21528699dad74068b976e54804 865 PRINTS PR00415 Aconitase family signature 287 300 1.2E-25 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS08880 00714f21528699dad74068b976e54804 865 PRINTS PR00415 Aconitase family signature 211 226 1.2E-25 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS08880 00714f21528699dad74068b976e54804 865 PRINTS PR00415 Aconitase family signature 273 286 1.2E-25 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS08880 00714f21528699dad74068b976e54804 865 PRINTS PR00415 Aconitase family signature 144 157 1.2E-25 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS08880 00714f21528699dad74068b976e54804 865 Pfam PF00330 Aconitase family (aconitate hydratase) 76 539 1.6E-146 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS08880 00714f21528699dad74068b976e54804 865 Gene3D G3DSA:3.30.499.10 29 232 8.3E-59 T 21-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS08880 00714f21528699dad74068b976e54804 865 Gene3D G3DSA:3.40.1060.10 233 365 3.0E-34 T 21-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS08880 00714f21528699dad74068b976e54804 865 PANTHER PTHR11670 1 682 0.0 T 21-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS08880 00714f21528699dad74068b976e54804 865 PANTHER PTHR11670 725 865 0.0 T 21-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS00735 92a7d8b465290c7a33e7de666add5677 388 PANTHER PTHR11374 1 384 8.2E-236 T 21-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 VFU_RS00735 92a7d8b465290c7a33e7de666add5677 388 PIRSF PIRSF000124 1 388 3.1E-140 T 21-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 VFU_RS00735 92a7d8b465290c7a33e7de666add5677 388 SMART SM00984 300 387 1.1E-15 T 21-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 VFU_RS00735 92a7d8b465290c7a33e7de666add5677 388 Gene3D G3DSA:1.10.1040.10 198 284 1.1E-34 T 21-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VFU_RS00735 92a7d8b465290c7a33e7de666add5677 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 2.1E-104 T 21-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 VFU_RS00735 92a7d8b465290c7a33e7de666add5677 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 4.7E-26 T 21-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 VFU_RS00735 92a7d8b465290c7a33e7de666add5677 388 Gene3D G3DSA:3.40.50.720 285 388 3.3E-50 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS00735 92a7d8b465290c7a33e7de666add5677 388 SUPERFAMILY SSF48179 191 287 3.06E-30 T 21-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VFU_RS00735 92a7d8b465290c7a33e7de666add5677 388 PIRSF PIRSF500134 1 343 2.2E-124 T 21-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 VFU_RS00735 92a7d8b465290c7a33e7de666add5677 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 169 1.7E-33 T 21-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 VFU_RS00735 92a7d8b465290c7a33e7de666add5677 388 SUPERFAMILY SSF52413 283 387 2.88E-28 T 21-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 VFU_RS00735 92a7d8b465290c7a33e7de666add5677 388 PANTHER PTHR11374:SF17 1 384 8.2E-236 T 21-04-2016 VFU_RS00735 92a7d8b465290c7a33e7de666add5677 388 Gene3D G3DSA:3.40.50.720 1 197 4.3E-68 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS00735 92a7d8b465290c7a33e7de666add5677 388 SUPERFAMILY SSF51735 1 194 2.66E-48 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS00735 92a7d8b465290c7a33e7de666add5677 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 378 2.0E-9 T 21-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 VFU_RS01770 f4955ddd770326f66d862645d81fa83f 270 PANTHER PTHR11410:SF7 135 270 4.9E-100 T 21-04-2016 VFU_RS01770 f4955ddd770326f66d862645d81fa83f 270 PANTHER PTHR11410:SF7 31 119 4.9E-100 T 21-04-2016 VFU_RS01770 f4955ddd770326f66d862645d81fa83f 270 PANTHER PTHR11410 135 270 4.9E-100 T 21-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VFU_RS01770 f4955ddd770326f66d862645d81fa83f 270 PANTHER PTHR11410 31 119 4.9E-100 T 21-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VFU_RS01770 f4955ddd770326f66d862645d81fa83f 270 Pfam PF00119 ATP synthase A chain 44 262 1.6E-57 T 21-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VFU_RS01770 f4955ddd770326f66d862645d81fa83f 270 ProSitePatterns PS00449 ATP synthase a subunit signature. 203 212 - T 21-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site VFU_RS01770 f4955ddd770326f66d862645d81fa83f 270 PRINTS PR00123 ATP synthase A subunit signature 200 222 3.57E-14 T 21-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VFU_RS01770 f4955ddd770326f66d862645d81fa83f 270 PRINTS PR00123 ATP synthase A subunit signature 101 117 3.57E-14 T 21-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VFU_RS01770 f4955ddd770326f66d862645d81fa83f 270 PRINTS PR00123 ATP synthase A subunit signature 248 263 3.57E-14 T 21-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VFU_RS01770 f4955ddd770326f66d862645d81fa83f 270 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 35 263 5.2E-44 T 21-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VFU_RS01770 f4955ddd770326f66d862645d81fa83f 270 SUPERFAMILY SSF81336 93 262 7.98E-50 T 21-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VFU_RS01770 f4955ddd770326f66d862645d81fa83f 270 Hamap MF_01393 ATP synthase subunit a [atpB]. 14 268 15.562 T 21-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VFU_RS01770 f4955ddd770326f66d862645d81fa83f 270 Gene3D G3DSA:1.20.120.220 94 267 2.5E-60 T 21-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VFU_RS10115 c668d5efe1363b735a44150fae412e00 124 Pfam PF13671 AAA domain 5 100 3.4E-13 T 21-04-2016 VFU_RS10115 c668d5efe1363b735a44150fae412e00 124 PANTHER PTHR13308 5 122 7.8E-18 T 21-04-2016 VFU_RS10115 c668d5efe1363b735a44150fae412e00 124 PANTHER PTHR13308:SF11 5 122 7.8E-18 T 21-04-2016 VFU_RS10115 c668d5efe1363b735a44150fae412e00 124 Gene3D G3DSA:3.40.50.300 5 100 4.3E-19 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS10115 c668d5efe1363b735a44150fae412e00 124 SUPERFAMILY SSF52540 6 99 1.41E-10 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS05105 d648dc5a70febd954355a0ef04b5c34c 505 SUPERFAMILY SSF55073 344 501 1.02E-32 T 21-04-2016 IPR029787 Nucleotide cyclase VFU_RS05105 d648dc5a70febd954355a0ef04b5c34c 505 Gene3D G3DSA:3.30.70.270 340 501 9.1E-39 T 21-04-2016 VFU_RS05105 d648dc5a70febd954355a0ef04b5c34c 505 Pfam PF05228 CHASE4 domain 58 211 7.7E-23 T 21-04-2016 IPR007892 CHASE4 VFU_RS05105 d648dc5a70febd954355a0ef04b5c34c 505 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 335 502 4.2E-36 T 21-04-2016 IPR000160 GGDEF domain VFU_RS05105 d648dc5a70febd954355a0ef04b5c34c 505 PANTHER PTHR10799:SF750 255 496 2.5E-20 T 21-04-2016 VFU_RS05105 d648dc5a70febd954355a0ef04b5c34c 505 SMART SM00267 328 502 8.3E-45 T 21-04-2016 IPR000160 GGDEF domain VFU_RS05105 d648dc5a70febd954355a0ef04b5c34c 505 Pfam PF00990 Diguanylate cyclase, GGDEF domain 340 497 2.0E-37 T 21-04-2016 IPR000160 GGDEF domain VFU_RS05105 d648dc5a70febd954355a0ef04b5c34c 505 PANTHER PTHR10799 255 496 2.5E-20 T 21-04-2016 VFU_RS03330 bbd349748825f5f1aa4154209b749be1 123 SMART SM01374 1 123 2.8E-86 T 21-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VFU_RS03330 bbd349748825f5f1aa4154209b749be1 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 6.2E-59 T 21-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 VFU_RS03330 bbd349748825f5f1aa4154209b749be1 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 21-04-2016 IPR019972 Ribosomal protein L14P, conserved site VFU_RS03330 bbd349748825f5f1aa4154209b749be1 123 PANTHER PTHR11761 1 123 2.8E-77 T 21-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VFU_RS03330 bbd349748825f5f1aa4154209b749be1 123 SUPERFAMILY SSF50193 2 122 1.09E-51 T 21-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VFU_RS03330 bbd349748825f5f1aa4154209b749be1 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 28.101 T 21-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VFU_RS03330 bbd349748825f5f1aa4154209b749be1 123 Gene3D G3DSA:2.40.150.20 1 123 1.5E-55 T 21-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VFU_RS03330 bbd349748825f5f1aa4154209b749be1 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 4.9E-55 T 21-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VFU_RS03045 5c23bdebe91b596b3e27765accdb8ba0 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 21-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 VFU_RS03045 5c23bdebe91b596b3e27765accdb8ba0 273 PANTHER PTHR23416:SF2 5 259 3.0E-150 T 21-04-2016 VFU_RS03045 5c23bdebe91b596b3e27765accdb8ba0 273 Gene3D G3DSA:1.10.3130.10 7 142 6.2E-47 T 21-04-2016 VFU_RS03045 5c23bdebe91b596b3e27765accdb8ba0 273 PANTHER PTHR23416 5 259 3.0E-150 T 21-04-2016 VFU_RS03045 5c23bdebe91b596b3e27765accdb8ba0 273 SMART SM00971 9 113 3.9E-60 T 21-04-2016 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 VFU_RS03045 5c23bdebe91b596b3e27765accdb8ba0 273 SUPERFAMILY SSF51161 9 259 3.88E-63 T 21-04-2016 IPR011004 Trimeric LpxA-like VFU_RS03045 5c23bdebe91b596b3e27765accdb8ba0 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 1.4E-8 T 21-04-2016 IPR001451 Hexapeptide repeat VFU_RS03045 5c23bdebe91b596b3e27765accdb8ba0 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 82 242 1.4E-74 T 21-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 VFU_RS03045 5c23bdebe91b596b3e27765accdb8ba0 273 Gene3D G3DSA:2.160.10.10 143 250 4.8E-31 T 21-04-2016 VFU_RS03045 5c23bdebe91b596b3e27765accdb8ba0 273 Pfam PF06426 Serine acetyltransferase, N-terminal 9 112 3.1E-38 T 21-04-2016 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 VFU_RS10475 20078d6d1ca4d38e95474a8d4c5c3bd3 609 Gene3D G3DSA:1.10.150.20 554 608 6.1E-23 T 21-04-2016 VFU_RS10475 20078d6d1ca4d38e95474a8d4c5c3bd3 609 PANTHER PTHR30562 8 607 1.4E-282 T 21-04-2016 VFU_RS10475 20078d6d1ca4d38e95474a8d4c5c3bd3 609 SUPERFAMILY SSF82771 15 99 1.14E-23 T 21-04-2016 IPR000305 GIY-YIG nuclease superfamily VFU_RS10475 20078d6d1ca4d38e95474a8d4c5c3bd3 609 Pfam PF02151 UvrB/uvrC motif 204 237 1.7E-5 T 21-04-2016 IPR001943 UVR domain GO:0005515 VFU_RS10475 20078d6d1ca4d38e95474a8d4c5c3bd3 609 Hamap MF_00203 UvrABC system protein C [uvrC]. 3 606 28.321 T 21-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 VFU_RS10475 20078d6d1ca4d38e95474a8d4c5c3bd3 609 SMART SM00465 16 97 9.4E-24 T 21-04-2016 IPR000305 GIY-YIG nuclease superfamily VFU_RS10475 20078d6d1ca4d38e95474a8d4c5c3bd3 609 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 8 588 1.6E-212 T 21-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 VFU_RS10475 20078d6d1ca4d38e95474a8d4c5c3bd3 609 Gene3D G3DSA:3.40.1440.10 15 96 1.4E-12 T 21-04-2016 IPR027299 GIY-YIG domain VFU_RS10475 20078d6d1ca4d38e95474a8d4c5c3bd3 609 PANTHER PTHR30562:SF1 8 607 1.4E-282 T 21-04-2016 VFU_RS10475 20078d6d1ca4d38e95474a8d4c5c3bd3 609 Pfam PF01541 GIY-YIG catalytic domain 17 92 1.7E-13 T 21-04-2016 IPR000305 GIY-YIG nuclease superfamily VFU_RS10475 20078d6d1ca4d38e95474a8d4c5c3bd3 609 SMART SM00278 555 574 0.24 T 21-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VFU_RS10475 20078d6d1ca4d38e95474a8d4c5c3bd3 609 SMART SM00278 587 606 510.0 T 21-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VFU_RS10475 20078d6d1ca4d38e95474a8d4c5c3bd3 609 Pfam PF14520 Helix-hairpin-helix domain 557 608 2.4E-9 T 21-04-2016 VFU_RS10475 20078d6d1ca4d38e95474a8d4c5c3bd3 609 Gene3D G3DSA:4.10.860.10 182 242 6.3E-18 T 21-04-2016 IPR001943 UVR domain GO:0005515 VFU_RS10475 20078d6d1ca4d38e95474a8d4c5c3bd3 609 SUPERFAMILY SSF47781 520 608 4.13E-19 T 21-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 VFU_RS10475 20078d6d1ca4d38e95474a8d4c5c3bd3 609 SUPERFAMILY SSF46600 189 242 2.75E-12 T 21-04-2016 IPR001943 UVR domain GO:0005515 VFU_RS10475 20078d6d1ca4d38e95474a8d4c5c3bd3 609 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 389 541 1.1E-43 T 21-04-2016 IPR001162 UvrC family homology region VFU_RS10010 d3793da5a716402f1865a78831711618 139 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 7 53 2.2E-13 T 21-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 VFU_RS10010 d3793da5a716402f1865a78831711618 139 PANTHER PTHR11615 1 139 2.8E-46 T 21-04-2016 VFU_RS10010 d3793da5a716402f1865a78831711618 139 SUPERFAMILY SSF53706 1 139 8.77E-47 T 21-04-2016 VFU_RS10010 d3793da5a716402f1865a78831711618 139 SMART SM00926 1 54 4.9E-14 T 21-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 VFU_RS10010 d3793da5a716402f1865a78831711618 139 Gene3D G3DSA:2.20.25.90 2 54 5.4E-20 T 21-04-2016 VFU_RS10010 d3793da5a716402f1865a78831711618 139 Pfam PF00384 Molybdopterin oxidoreductase 61 138 5.9E-16 T 21-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 VFU_RS10010 d3793da5a716402f1865a78831711618 139 Gene3D G3DSA:3.40.50.740 61 136 1.0E-24 T 21-04-2016 VFU_RS10010 d3793da5a716402f1865a78831711618 139 PANTHER PTHR11615:SF112 1 139 2.8E-46 T 21-04-2016 VFU_RS11225 7fdd91b3b9ae78097db5eb81f7619e8e 284 PANTHER PTHR30514:SF7 1 272 4.2E-195 T 21-04-2016 VFU_RS11225 7fdd91b3b9ae78097db5eb81f7619e8e 284 Pfam PF01380 SIS domain 124 252 5.4E-26 T 21-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 VFU_RS11225 7fdd91b3b9ae78097db5eb81f7619e8e 284 PANTHER PTHR30514 1 272 4.2E-195 T 21-04-2016 VFU_RS11225 7fdd91b3b9ae78097db5eb81f7619e8e 284 Gene3D G3DSA:3.40.50.10490 96 271 1.9E-37 T 21-04-2016 VFU_RS11225 7fdd91b3b9ae78097db5eb81f7619e8e 284 SUPERFAMILY SSF53697 93 279 3.71E-40 T 21-04-2016 VFU_RS11225 7fdd91b3b9ae78097db5eb81f7619e8e 284 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 1.0E-28 T 21-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 VFU_RS11225 7fdd91b3b9ae78097db5eb81f7619e8e 284 Gene3D G3DSA:1.10.10.10 1 80 2.5E-31 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS11225 7fdd91b3b9ae78097db5eb81f7619e8e 284 SUPERFAMILY SSF46689 1 80 1.58E-21 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS14575 2bba11d7cc433850adfbc1208b30817f 147 Gene3D G3DSA:1.10.10.410 91 147 2.3E-23 T 21-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal VFU_RS14575 2bba11d7cc433850adfbc1208b30817f 147 PANTHER PTHR28055:SF1 1 147 2.9E-51 T 21-04-2016 VFU_RS14575 2bba11d7cc433850adfbc1208b30817f 147 PANTHER PTHR28055 1 147 2.9E-51 T 21-04-2016 VFU_RS14575 2bba11d7cc433850adfbc1208b30817f 147 Pfam PF09424 Yqey-like protein 5 146 1.7E-56 T 21-04-2016 IPR019004 Uncharacterised domain YOR215C, mitochondrial VFU_RS14575 2bba11d7cc433850adfbc1208b30817f 147 SUPERFAMILY SSF89095 1 146 2.41E-43 T 21-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 VFU_RS14575 2bba11d7cc433850adfbc1208b30817f 147 Gene3D G3DSA:1.10.1510.10 1 90 6.0E-33 T 21-04-2016 VFU_RS09235 86082c3edbb2bef4384083a00afda9e0 343 Pfam PF13416 Bacterial extracellular solute-binding protein 42 301 4.1E-37 T 21-04-2016 VFU_RS09235 86082c3edbb2bef4384083a00afda9e0 343 PIRSF PIRSF019574 1 343 5.4E-109 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VFU_RS09235 86082c3edbb2bef4384083a00afda9e0 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 91 104 1.3E-71 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VFU_RS09235 86082c3edbb2bef4384083a00afda9e0 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 75 89 1.3E-71 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VFU_RS09235 86082c3edbb2bef4384083a00afda9e0 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 247 266 1.3E-71 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VFU_RS09235 86082c3edbb2bef4384083a00afda9e0 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 203 222 1.3E-71 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VFU_RS09235 86082c3edbb2bef4384083a00afda9e0 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 32 48 1.3E-71 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VFU_RS09235 86082c3edbb2bef4384083a00afda9e0 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 122 138 1.3E-71 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VFU_RS09235 86082c3edbb2bef4384083a00afda9e0 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 48 69 1.3E-71 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VFU_RS09235 86082c3edbb2bef4384083a00afda9e0 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 166 185 1.3E-71 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VFU_RS09235 86082c3edbb2bef4384083a00afda9e0 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 148 162 1.3E-71 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VFU_RS09235 86082c3edbb2bef4384083a00afda9e0 343 Gene3D G3DSA:3.40.190.10 27 143 1.3E-23 T 21-04-2016 VFU_RS09235 86082c3edbb2bef4384083a00afda9e0 343 PANTHER PTHR30222:SF10 1 338 5.8E-164 T 21-04-2016 VFU_RS09235 86082c3edbb2bef4384083a00afda9e0 343 SUPERFAMILY SSF53850 26 331 3.65E-86 T 21-04-2016 VFU_RS09235 86082c3edbb2bef4384083a00afda9e0 343 Gene3D G3DSA:3.40.190.10 144 287 6.9E-56 T 21-04-2016 VFU_RS09235 86082c3edbb2bef4384083a00afda9e0 343 PANTHER PTHR30222 1 338 5.8E-164 T 21-04-2016 VFU_RS09035 13965ca34dfca02dfe8eda485b87c3a9 134 PANTHER PTHR30558:SF3 1 133 3.3E-34 T 21-04-2016 VFU_RS09035 13965ca34dfca02dfe8eda485b87c3a9 134 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 132 7.9E-29 T 21-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 VFU_RS09035 13965ca34dfca02dfe8eda485b87c3a9 134 PANTHER PTHR30558 1 133 3.3E-34 T 21-04-2016 VFU_RS11700 176b9b4b1c457f99e43545a4645b9b48 963 SUPERFAMILY SSF46785 895 958 4.15E-21 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS11700 176b9b4b1c457f99e43545a4645b9b48 963 SUPERFAMILY SSF52540 552 864 1.22E-48 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS11700 176b9b4b1c457f99e43545a4645b9b48 963 SMART SM00843 895 960 2.1E-38 T 21-04-2016 IPR018541 FtsK gamma domain VFU_RS11700 176b9b4b1c457f99e43545a4645b9b48 963 Gene3D G3DSA:3.40.50.300 552 858 7.5E-92 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS11700 176b9b4b1c457f99e43545a4645b9b48 963 PANTHER PTHR22683:SF41 29 958 0.0 T 21-04-2016 VFU_RS11700 176b9b4b1c457f99e43545a4645b9b48 963 Pfam PF01580 FtsK/SpoIIIE family 578 791 1.9E-70 T 21-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 VFU_RS11700 176b9b4b1c457f99e43545a4645b9b48 963 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 28 199 8.9E-42 T 21-04-2016 IPR025199 DNA translocase FtsK, 4TM region VFU_RS11700 176b9b4b1c457f99e43545a4645b9b48 963 Pfam PF09397 Ftsk gamma domain 897 957 4.5E-26 T 21-04-2016 IPR018541 FtsK gamma domain VFU_RS11700 176b9b4b1c457f99e43545a4645b9b48 963 PANTHER PTHR22683 29 958 0.0 T 21-04-2016 VFU_RS02635 ad4842ca23c53ec2f4a6576293b6959e 182 Pfam PF00293 NUDIX domain 46 159 1.4E-16 T 21-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 VFU_RS02635 ad4842ca23c53ec2f4a6576293b6959e 182 PRINTS PR00502 NUDIX hydrolase family signature 75 89 3.8E-5 T 21-04-2016 IPR020476 NUDIX hydrolase VFU_RS02635 ad4842ca23c53ec2f4a6576293b6959e 182 PRINTS PR00502 NUDIX hydrolase family signature 89 104 3.8E-5 T 21-04-2016 IPR020476 NUDIX hydrolase VFU_RS02635 ad4842ca23c53ec2f4a6576293b6959e 182 PANTHER PTHR11839 1 181 9.8E-98 T 21-04-2016 VFU_RS02635 ad4842ca23c53ec2f4a6576293b6959e 182 PANTHER PTHR11839:SF12 1 181 9.8E-98 T 21-04-2016 VFU_RS02635 ad4842ca23c53ec2f4a6576293b6959e 182 Gene3D G3DSA:3.90.79.10 9 181 4.9E-44 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VFU_RS02635 ad4842ca23c53ec2f4a6576293b6959e 182 SUPERFAMILY SSF55811 8 180 7.31E-40 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VFU_RS02635 ad4842ca23c53ec2f4a6576293b6959e 182 ProSitePatterns PS00893 Nudix box signature. 80 101 - T 21-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VFU_RS07730 f37ee0cbda3026c9ccd7f2294ca32b97 231 Gene3D G3DSA:3.40.50.300 4 220 5.7E-80 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS07730 f37ee0cbda3026c9ccd7f2294ca32b97 231 PIRSF PIRSF006755 1 227 3.6E-79 T 21-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 VFU_RS07730 f37ee0cbda3026c9ccd7f2294ca32b97 231 Pfam PF13500 AAA domain 4 211 8.8E-39 T 21-04-2016 VFU_RS07730 f37ee0cbda3026c9ccd7f2294ca32b97 231 SUPERFAMILY SSF52540 1 215 6.91E-63 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS07730 f37ee0cbda3026c9ccd7f2294ca32b97 231 PANTHER PTHR21343 1 225 2.0E-117 T 21-04-2016 VFU_RS07730 f37ee0cbda3026c9ccd7f2294ca32b97 231 PANTHER PTHR21343:SF13 1 225 2.0E-117 T 21-04-2016 VFU_RS07730 f37ee0cbda3026c9ccd7f2294ca32b97 231 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 176 2.9E-54 T 21-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 VFU_RS07730 f37ee0cbda3026c9ccd7f2294ca32b97 231 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 218 29.575 T 21-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 VFU_RS01525 515f8a6ec1ed2972bcd6f13ff9ea35b3 94 Pfam PF13710 ACT domain 12 73 1.2E-21 T 21-04-2016 VFU_RS01525 515f8a6ec1ed2972bcd6f13ff9ea35b3 94 SUPERFAMILY SSF55021 3 74 1.54E-10 T 21-04-2016 VFU_RS01525 515f8a6ec1ed2972bcd6f13ff9ea35b3 94 Gene3D G3DSA:3.30.70.260 1 74 4.5E-12 T 21-04-2016 VFU_RS04070 be8ef7dfbf57ef2b4f315ee59d81480a 536 PIRSF PIRSF000171 1 532 7.4E-39 T 21-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit VFU_RS04070 be8ef7dfbf57ef2b4f315ee59d81480a 536 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 7 520 4.0E-212 T 21-04-2016 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 VFU_RS04070 be8ef7dfbf57ef2b4f315ee59d81480a 536 Gene3D G3DSA:3.90.700.10 244 348 5.5E-38 T 21-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain VFU_RS04070 be8ef7dfbf57ef2b4f315ee59d81480a 536 PANTHER PTHR11632 5 535 5.1E-272 T 21-04-2016 VFU_RS04070 be8ef7dfbf57ef2b4f315ee59d81480a 536 PANTHER PTHR11632:SF27 5 535 5.1E-272 T 21-04-2016 VFU_RS04070 be8ef7dfbf57ef2b4f315ee59d81480a 536 Gene3D G3DSA:3.50.50.60 349 412 1.2E-103 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS04070 be8ef7dfbf57ef2b4f315ee59d81480a 536 Gene3D G3DSA:3.50.50.60 3 243 1.2E-103 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS04070 be8ef7dfbf57ef2b4f315ee59d81480a 536 Pfam PF00890 FAD binding domain 10 392 2.6E-100 T 21-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain VFU_RS04070 be8ef7dfbf57ef2b4f315ee59d81480a 536 Gene3D G3DSA:1.20.58.100 422 521 3.2E-34 T 21-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 VFU_RS04070 be8ef7dfbf57ef2b4f315ee59d81480a 536 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 521 1.4E-14 T 21-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 VFU_RS04070 be8ef7dfbf57ef2b4f315ee59d81480a 536 SUPERFAMILY SSF51905 5 255 1.63E-73 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS04070 be8ef7dfbf57ef2b4f315ee59d81480a 536 SUPERFAMILY SSF51905 356 447 1.63E-73 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS04070 be8ef7dfbf57ef2b4f315ee59d81480a 536 SUPERFAMILY SSF46977 425 525 3.92E-32 T 21-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 VFU_RS04070 be8ef7dfbf57ef2b4f315ee59d81480a 536 SUPERFAMILY SSF56425 238 353 1.18E-41 T 21-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain VFU_RS04070 be8ef7dfbf57ef2b4f315ee59d81480a 536 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 1.6E-8 T 21-04-2016 VFU_RS04070 be8ef7dfbf57ef2b4f315ee59d81480a 536 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 1.6E-8 T 21-04-2016 VFU_RS00255 1cc128a07f103f3bf3f9a2ff1f2c681b 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 1.7E-33 T 21-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal VFU_RS00255 1cc128a07f103f3bf3f9a2ff1f2c681b 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 21-04-2016 IPR031157 Tr-type G domain, conserved site VFU_RS00255 1cc128a07f103f3bf3f9a2ff1f2c681b 394 Gene3D G3DSA:3.40.50.300 4 211 6.7E-68 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS00255 1cc128a07f103f3bf3f9a2ff1f2c681b 394 Gene3D G3DSA:2.40.30.10 212 298 1.3E-35 T 21-04-2016 VFU_RS00255 1cc128a07f103f3bf3f9a2ff1f2c681b 394 Gene3D G3DSA:2.40.30.10 300 393 5.1E-47 T 21-04-2016 VFU_RS00255 1cc128a07f103f3bf3f9a2ff1f2c681b 394 PANTHER PTHR23115 1 393 7.6E-288 T 21-04-2016 VFU_RS00255 1cc128a07f103f3bf3f9a2ff1f2c681b 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 4.9E-58 T 21-04-2016 VFU_RS00255 1cc128a07f103f3bf3f9a2ff1f2c681b 394 SUPERFAMILY SSF52540 6 219 1.59E-60 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS00255 1cc128a07f103f3bf3f9a2ff1f2c681b 394 PANTHER PTHR23115:SF151 1 393 7.6E-288 T 21-04-2016 VFU_RS00255 1cc128a07f103f3bf3f9a2ff1f2c681b 394 SUPERFAMILY SSF50465 298 393 2.04E-35 T 21-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VFU_RS00255 1cc128a07f103f3bf3f9a2ff1f2c681b 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 6.1E-14 T 21-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VFU_RS00255 1cc128a07f103f3bf3f9a2ff1f2c681b 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.753 T 21-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 VFU_RS00255 1cc128a07f103f3bf3f9a2ff1f2c681b 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 1.0E-16 T 21-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 VFU_RS00255 1cc128a07f103f3bf3f9a2ff1f2c681b 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 7.0E-24 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VFU_RS00255 1cc128a07f103f3bf3f9a2ff1f2c681b 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 7.0E-24 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VFU_RS00255 1cc128a07f103f3bf3f9a2ff1f2c681b 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 7.0E-24 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VFU_RS00255 1cc128a07f103f3bf3f9a2ff1f2c681b 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 7.0E-24 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VFU_RS00255 1cc128a07f103f3bf3f9a2ff1f2c681b 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 7.0E-24 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VFU_RS00255 1cc128a07f103f3bf3f9a2ff1f2c681b 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 2.0E-231 T 21-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 VFU_RS00255 1cc128a07f103f3bf3f9a2ff1f2c681b 394 SUPERFAMILY SSF50447 205 301 4.52E-30 T 21-04-2016 IPR009000 Translation protein, beta-barrel domain VFU_RS08485 1311c25f36aa8812be4ba26d51a47b53 495 Gene3D G3DSA:1.10.1040.10 197 451 2.6E-99 T 21-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VFU_RS08485 1311c25f36aa8812be4ba26d51a47b53 495 SUPERFAMILY SSF48179 193 488 1.02E-110 T 21-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VFU_RS08485 1311c25f36aa8812be4ba26d51a47b53 495 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 195 485 3.1E-117 T 21-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VFU_RS08485 1311c25f36aa8812be4ba26d51a47b53 495 Gene3D G3DSA:3.40.50.720 2 196 8.4E-44 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS08485 1311c25f36aa8812be4ba26d51a47b53 495 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 270 282 - T 21-04-2016 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VFU_RS08485 1311c25f36aa8812be4ba26d51a47b53 495 SUPERFAMILY SSF51735 3 173 4.63E-37 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS08485 1311c25f36aa8812be4ba26d51a47b53 495 SMART SM01350 195 486 2.0E-179 T 21-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VFU_RS08485 1311c25f36aa8812be4ba26d51a47b53 495 Gene3D G3DSA:1.20.5.320 453 491 5.1E-19 T 21-04-2016 IPR012284 6-phosphogluconate dehydrogenase, domain 3 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VFU_RS08485 1311c25f36aa8812be4ba26d51a47b53 495 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 170 9.2E-35 T 21-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 VFU_RS08485 1311c25f36aa8812be4ba26d51a47b53 495 PANTHER PTHR11811:SF25 1 491 1.6E-221 T 21-04-2016 VFU_RS08485 1311c25f36aa8812be4ba26d51a47b53 495 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 4 486 3.9E-171 T 21-04-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VFU_RS08485 1311c25f36aa8812be4ba26d51a47b53 495 PIRSF PIRSF000109 1 494 5.5E-169 T 21-04-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VFU_RS08485 1311c25f36aa8812be4ba26d51a47b53 495 PANTHER PTHR11811 1 491 1.6E-221 T 21-04-2016 VFU_RS08485 1311c25f36aa8812be4ba26d51a47b53 495 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 184 212 3.6E-50 T 21-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VFU_RS08485 1311c25f36aa8812be4ba26d51a47b53 495 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 266 293 3.6E-50 T 21-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VFU_RS08485 1311c25f36aa8812be4ba26d51a47b53 495 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 373 395 3.6E-50 T 21-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VFU_RS08485 1311c25f36aa8812be4ba26d51a47b53 495 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 72 101 3.6E-50 T 21-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VFU_RS08485 1311c25f36aa8812be4ba26d51a47b53 495 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 3 26 3.6E-50 T 21-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VFU_RS11130 30ea246c1e119dd7028af4a32a14417e 307 PANTHER PTHR30537 1 301 5.9E-103 T 21-04-2016 VFU_RS11130 30ea246c1e119dd7028af4a32a14417e 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 67 1.6E-15 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS11130 30ea246c1e119dd7028af4a32a14417e 307 SUPERFAMILY SSF46785 15 85 1.68E-16 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS11130 30ea246c1e119dd7028af4a32a14417e 307 Gene3D G3DSA:3.40.190.10 182 264 3.1E-8 T 21-04-2016 VFU_RS11130 30ea246c1e119dd7028af4a32a14417e 307 Gene3D G3DSA:1.10.10.10 15 86 8.8E-19 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS11130 30ea246c1e119dd7028af4a32a14417e 307 SUPERFAMILY SSF53850 93 301 4.16E-45 T 21-04-2016 VFU_RS11130 30ea246c1e119dd7028af4a32a14417e 307 PANTHER PTHR30537:SF5 1 301 5.9E-103 T 21-04-2016 VFU_RS11130 30ea246c1e119dd7028af4a32a14417e 307 Pfam PF03466 LysR substrate binding domain 93 297 3.9E-42 T 21-04-2016 IPR005119 LysR, substrate-binding VFU_RS11130 30ea246c1e119dd7028af4a32a14417e 307 Gene3D G3DSA:3.40.190.10 96 181 2.7E-21 T 21-04-2016 VFU_RS06830 302132fcf901603717747c50891162d9 279 Pfam PF04962 KduI/IolB family 66 272 2.6E-32 T 21-04-2016 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 VFU_RS06830 302132fcf901603717747c50891162d9 279 Gene3D G3DSA:2.60.120.500 134 279 1.3E-70 T 21-04-2016 IPR027447 5-keto-4-deoxyuronate isomerase, C-terminal domain KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 VFU_RS06830 302132fcf901603717747c50891162d9 279 Gene3D G3DSA:2.60.120.520 20 133 3.2E-44 T 21-04-2016 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal domain KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 VFU_RS06830 302132fcf901603717747c50891162d9 279 PIRSF PIRSF006625 1 279 1.8E-118 T 21-04-2016 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 VFU_RS06830 302132fcf901603717747c50891162d9 279 SUPERFAMILY SSF51182 1 263 8.3E-97 T 21-04-2016 IPR011051 RmlC-like cupin domain VFU_RS06830 302132fcf901603717747c50891162d9 279 Hamap MF_00687 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [kduI]. 1 279 51.285 T 21-04-2016 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 VFU_RS06830 302132fcf901603717747c50891162d9 279 PANTHER PTHR38461 1 279 4.0E-134 T 21-04-2016 VFU_RS01645 09b01eca39910a6e4d0ea6033fd29887 118 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 56 70 - T 21-04-2016 IPR020539 Ribonuclease P, conserved site GO:0004526 VFU_RS01645 09b01eca39910a6e4d0ea6033fd29887 118 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 115 17.068 T 21-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VFU_RS01645 09b01eca39910a6e4d0ea6033fd29887 118 SUPERFAMILY SSF54211 4 114 5.06E-30 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VFU_RS01645 09b01eca39910a6e4d0ea6033fd29887 118 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 16 104 3.0E-41 T 21-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VFU_RS01645 09b01eca39910a6e4d0ea6033fd29887 118 Pfam PF00825 Ribonuclease P 6 112 2.0E-32 T 21-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VFU_RS01645 09b01eca39910a6e4d0ea6033fd29887 118 PANTHER PTHR33992 2 114 2.8E-38 T 21-04-2016 VFU_RS01645 09b01eca39910a6e4d0ea6033fd29887 118 Gene3D G3DSA:3.30.230.10 4 113 7.1E-33 T 21-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VFU_RS01645 09b01eca39910a6e4d0ea6033fd29887 118 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 6 113 4.2E-27 T 21-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VFU_RS11565 ddc4880a26fa665e536b62e2e33151b4 422 Pfam PF04285 Protein of unknown function (DUF444) 3 420 7.2E-189 T 21-04-2016 IPR006698 Uncharacterised protein family UPF0229 VFU_RS11565 ddc4880a26fa665e536b62e2e33151b4 422 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 422 40.831 T 21-04-2016 IPR006698 Uncharacterised protein family UPF0229 VFU_RS11565 ddc4880a26fa665e536b62e2e33151b4 422 PANTHER PTHR30510 1 420 1.1E-191 T 21-04-2016 VFU_RS02000 9a518abc1cd8f07f6f78cbc32224a40b 761 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 327 490 1.2E-32 T 21-04-2016 IPR000160 GGDEF domain VFU_RS02000 9a518abc1cd8f07f6f78cbc32224a40b 761 Pfam PF00563 EAL domain 511 745 4.5E-60 T 21-04-2016 IPR001633 EAL domain VFU_RS02000 9a518abc1cd8f07f6f78cbc32224a40b 761 SMART SM00267 319 491 1.1E-42 T 21-04-2016 IPR000160 GGDEF domain VFU_RS02000 9a518abc1cd8f07f6f78cbc32224a40b 761 Pfam PF08448 PAS fold 89 197 1.7E-6 T 21-04-2016 IPR013656 PAS fold-4 VFU_RS02000 9a518abc1cd8f07f6f78cbc32224a40b 761 Gene3D G3DSA:3.30.70.270 332 494 3.2E-43 T 21-04-2016 VFU_RS02000 9a518abc1cd8f07f6f78cbc32224a40b 761 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 206 323 9.5E-13 T 21-04-2016 IPR000014 PAS domain VFU_RS02000 9a518abc1cd8f07f6f78cbc32224a40b 761 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 81 203 3.6E-8 T 21-04-2016 IPR000014 PAS domain VFU_RS02000 9a518abc1cd8f07f6f78cbc32224a40b 761 Pfam PF00990 Diguanylate cyclase, GGDEF domain 330 487 3.1E-35 T 21-04-2016 IPR000160 GGDEF domain VFU_RS02000 9a518abc1cd8f07f6f78cbc32224a40b 761 SMART SM00091 208 274 9.9E-4 T 21-04-2016 IPR000014 PAS domain VFU_RS02000 9a518abc1cd8f07f6f78cbc32224a40b 761 SMART SM00091 83 150 0.0017 T 21-04-2016 IPR000014 PAS domain VFU_RS02000 9a518abc1cd8f07f6f78cbc32224a40b 761 Pfam PF13426 PAS domain 219 317 2.9E-9 T 21-04-2016 IPR000014 PAS domain VFU_RS02000 9a518abc1cd8f07f6f78cbc32224a40b 761 Gene3D G3DSA:3.30.450.20 75 193 1.8E-13 T 21-04-2016 VFU_RS02000 9a518abc1cd8f07f6f78cbc32224a40b 761 Gene3D G3DSA:3.30.450.20 194 316 5.2E-18 T 21-04-2016 VFU_RS02000 9a518abc1cd8f07f6f78cbc32224a40b 761 SUPERFAMILY SSF141868 509 756 1.11E-70 T 21-04-2016 IPR001633 EAL domain VFU_RS02000 9a518abc1cd8f07f6f78cbc32224a40b 761 PANTHER PTHR33121 35 43 9.9E-46 T 21-04-2016 VFU_RS02000 9a518abc1cd8f07f6f78cbc32224a40b 761 PANTHER PTHR33121 452 759 9.9E-46 T 21-04-2016 VFU_RS02000 9a518abc1cd8f07f6f78cbc32224a40b 761 SUPERFAMILY SSF55785 193 317 1.68E-18 T 21-04-2016 IPR000014 PAS domain VFU_RS02000 9a518abc1cd8f07f6f78cbc32224a40b 761 SMART SM00052 503 750 3.4E-66 T 21-04-2016 IPR001633 EAL domain VFU_RS02000 9a518abc1cd8f07f6f78cbc32224a40b 761 PANTHER PTHR33121:SF10 35 43 9.9E-46 T 21-04-2016 VFU_RS02000 9a518abc1cd8f07f6f78cbc32224a40b 761 PANTHER PTHR33121:SF10 452 759 9.9E-46 T 21-04-2016 VFU_RS02000 9a518abc1cd8f07f6f78cbc32224a40b 761 SUPERFAMILY SSF55073 335 492 6.2E-40 T 21-04-2016 IPR029787 Nucleotide cyclase VFU_RS02000 9a518abc1cd8f07f6f78cbc32224a40b 761 SUPERFAMILY SSF55785 71 194 4.54E-12 T 21-04-2016 IPR000014 PAS domain VFU_RS02000 9a518abc1cd8f07f6f78cbc32224a40b 761 Gene3D G3DSA:3.20.20.450 511 755 3.8E-71 T 21-04-2016 IPR001633 EAL domain VFU_RS01980 963e49a1c4c9d8eb5d5c7f28fc01110e 313 Gene3D G3DSA:3.40.190.10 190 280 7.6E-33 T 21-04-2016 VFU_RS01980 963e49a1c4c9d8eb5d5c7f28fc01110e 313 SUPERFAMILY SSF46785 7 85 4.24E-16 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS01980 963e49a1c4c9d8eb5d5c7f28fc01110e 313 PANTHER PTHR30118 1 306 1.8E-195 T 21-04-2016 VFU_RS01980 963e49a1c4c9d8eb5d5c7f28fc01110e 313 Gene3D G3DSA:3.40.190.10 92 189 1.4E-15 T 21-04-2016 VFU_RS01980 963e49a1c4c9d8eb5d5c7f28fc01110e 313 SUPERFAMILY SSF53850 92 306 1.18E-46 T 21-04-2016 VFU_RS01980 963e49a1c4c9d8eb5d5c7f28fc01110e 313 Pfam PF03466 LysR substrate binding domain 96 307 3.2E-29 T 21-04-2016 IPR005119 LysR, substrate-binding VFU_RS01980 963e49a1c4c9d8eb5d5c7f28fc01110e 313 Gene3D G3DSA:1.10.10.10 2 89 7.0E-26 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS01980 963e49a1c4c9d8eb5d5c7f28fc01110e 313 PANTHER PTHR30118:SF9 1 306 1.8E-195 T 21-04-2016 VFU_RS01980 963e49a1c4c9d8eb5d5c7f28fc01110e 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 2.9E-6 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS01980 963e49a1c4c9d8eb5d5c7f28fc01110e 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 2.9E-6 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS01980 963e49a1c4c9d8eb5d5c7f28fc01110e 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 2.9E-6 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS01980 963e49a1c4c9d8eb5d5c7f28fc01110e 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 2.7E-16 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS05135 0267bdb3cde569194f7d0035c729d92b 594 Pfam PF00155 Aminotransferase class I and II 141 475 1.6E-8 T 21-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VFU_RS05135 0267bdb3cde569194f7d0035c729d92b 594 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 53 69 5.0E-5 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VFU_RS05135 0267bdb3cde569194f7d0035c729d92b 594 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 53 5.0E-5 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VFU_RS05135 0267bdb3cde569194f7d0035c729d92b 594 PANTHER PTHR11751:SF294 138 484 1.9E-53 T 21-04-2016 VFU_RS05135 0267bdb3cde569194f7d0035c729d92b 594 Gene3D G3DSA:1.10.10.10 6 80 6.2E-18 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS05135 0267bdb3cde569194f7d0035c729d92b 594 SUPERFAMILY SSF53383 125 482 2.17E-61 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VFU_RS05135 0267bdb3cde569194f7d0035c729d92b 594 PANTHER PTHR11751 138 484 1.9E-53 T 21-04-2016 VFU_RS05135 0267bdb3cde569194f7d0035c729d92b 594 SUPERFAMILY SSF46785 8 82 6.47E-14 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS05135 0267bdb3cde569194f7d0035c729d92b 594 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 79 6.3E-6 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VFU_RS05135 0267bdb3cde569194f7d0035c729d92b 594 SMART SM00345 20 79 3.1E-4 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VFU_RS05135 0267bdb3cde569194f7d0035c729d92b 594 Gene3D G3DSA:3.40.640.10 167 372 1.1E-40 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VFU_RS00090 b1ca931b888416e6af5ddd90f1589938 572 SUPERFAMILY SSF54106 409 452 1.96E-10 T 21-04-2016 IPR018392 LysM domain VFU_RS00090 b1ca931b888416e6af5ddd90f1589938 572 PANTHER PTHR30404:SF1 2 421 5.4E-201 T 21-04-2016 VFU_RS00090 b1ca931b888416e6af5ddd90f1589938 572 SMART SM00257 474 517 3.6E-12 T 21-04-2016 IPR018392 LysM domain VFU_RS00090 b1ca931b888416e6af5ddd90f1589938 572 SMART SM00257 409 452 1.3E-14 T 21-04-2016 IPR018392 LysM domain VFU_RS00090 b1ca931b888416e6af5ddd90f1589938 572 SMART SM00257 527 570 8.4E-15 T 21-04-2016 IPR018392 LysM domain VFU_RS00090 b1ca931b888416e6af5ddd90f1589938 572 Gene3D G3DSA:3.40.630.40 316 392 2.9E-57 T 21-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 VFU_RS00090 b1ca931b888416e6af5ddd90f1589938 572 Gene3D G3DSA:3.40.630.40 167 264 2.9E-57 T 21-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 VFU_RS00090 b1ca931b888416e6af5ddd90f1589938 572 Pfam PF11741 AMIN domain 33 135 9.7E-18 T 21-04-2016 IPR021731 AMIN domain VFU_RS00090 b1ca931b888416e6af5ddd90f1589938 572 SUPERFAMILY SSF54106 473 517 2.09E-9 T 21-04-2016 IPR018392 LysM domain VFU_RS00090 b1ca931b888416e6af5ddd90f1589938 572 Pfam PF01476 LysM domain 410 452 6.3E-12 T 21-04-2016 IPR018392 LysM domain VFU_RS00090 b1ca931b888416e6af5ddd90f1589938 572 Pfam PF01476 LysM domain 528 570 6.5E-14 T 21-04-2016 IPR018392 LysM domain VFU_RS00090 b1ca931b888416e6af5ddd90f1589938 572 Pfam PF01476 LysM domain 475 516 2.9E-11 T 21-04-2016 IPR018392 LysM domain VFU_RS00090 b1ca931b888416e6af5ddd90f1589938 572 PANTHER PTHR30404 2 421 5.4E-201 T 21-04-2016 VFU_RS00090 b1ca931b888416e6af5ddd90f1589938 572 SMART SM00646 229 388 1.3E-67 T 21-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 VFU_RS00090 b1ca931b888416e6af5ddd90f1589938 572 SUPERFAMILY SSF53187 315 391 2.79E-52 T 21-04-2016 VFU_RS00090 b1ca931b888416e6af5ddd90f1589938 572 SUPERFAMILY SSF53187 167 263 2.79E-52 T 21-04-2016 VFU_RS00090 b1ca931b888416e6af5ddd90f1589938 572 Gene3D G3DSA:3.10.350.10 407 453 1.1E-15 T 21-04-2016 IPR018392 LysM domain VFU_RS00090 b1ca931b888416e6af5ddd90f1589938 572 Gene3D G3DSA:3.10.350.10 472 517 1.1E-15 T 21-04-2016 IPR018392 LysM domain VFU_RS00090 b1ca931b888416e6af5ddd90f1589938 572 SUPERFAMILY SSF54106 527 570 3.14E-10 T 21-04-2016 IPR018392 LysM domain VFU_RS00090 b1ca931b888416e6af5ddd90f1589938 572 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 169 387 2.7E-49 T 21-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 VFU_RS00090 b1ca931b888416e6af5ddd90f1589938 572 Gene3D G3DSA:3.10.350.10 527 571 4.3E-16 T 21-04-2016 IPR018392 LysM domain VFU_RS07435 b0a00b85e39127b43194495db9daa7cb 543 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 98 398 3.8E-89 T 21-04-2016 IPR013148 Glycosyl hydrolase family 32, N-terminal VFU_RS07435 b0a00b85e39127b43194495db9daa7cb 543 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 437 502 4.8E-8 T 21-04-2016 IPR013189 Glycosyl hydrolase family 32, C-terminal VFU_RS07435 b0a00b85e39127b43194495db9daa7cb 543 Gene3D G3DSA:2.115.10.20 104 395 1.8E-20 T 21-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain VFU_RS07435 b0a00b85e39127b43194495db9daa7cb 543 SUPERFAMILY SSF75005 91 398 9.89E-89 T 21-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain VFU_RS07435 b0a00b85e39127b43194495db9daa7cb 543 PANTHER PTHR30175 44 543 7.4E-137 T 21-04-2016 VFU_RS07435 b0a00b85e39127b43194495db9daa7cb 543 PANTHER PTHR30175:SF0 44 543 7.4E-137 T 21-04-2016 VFU_RS07435 b0a00b85e39127b43194495db9daa7cb 543 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 98 111 - T 21-04-2016 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 VFU_RS07435 b0a00b85e39127b43194495db9daa7cb 543 SMART SM00640 98 502 5.0E-119 T 21-04-2016 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 VFU_RS07435 b0a00b85e39127b43194495db9daa7cb 543 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 91 512 3.0E-135 T 21-04-2016 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26|UniPathway: UPA00238 VFU_RS07435 b0a00b85e39127b43194495db9daa7cb 543 SUPERFAMILY SSF49899 401 534 3.01E-22 T 21-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain VFU_RS07435 b0a00b85e39127b43194495db9daa7cb 543 Gene3D G3DSA:2.60.120.560 396 536 1.6E-28 T 21-04-2016 IPR013189 Glycosyl hydrolase family 32, C-terminal VFU_RS14095 4d77df6372fded3309699df0f489224f 1511 Pfam PF00310 Glutamine amidotransferases class-II 21 443 9.1E-186 T 21-04-2016 IPR017932 Glutamine amidotransferase type 2 domain VFU_RS14095 4d77df6372fded3309699df0f489224f 1511 Pfam PF01493 GXGXG motif 1267 1452 2.4E-82 T 21-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 VFU_RS14095 4d77df6372fded3309699df0f489224f 1511 Gene3D G3DSA:3.60.20.10 21 454 1.5E-182 T 21-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VFU_RS14095 4d77df6372fded3309699df0f489224f 1511 PANTHER PTHR11938:SF1 10 1502 0.0 T 21-04-2016 VFU_RS14095 4d77df6372fded3309699df0f489224f 1511 Pfam PF04898 Glutamate synthase central domain 472 756 1.0E-115 T 21-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 VFU_RS14095 4d77df6372fded3309699df0f489224f 1511 Gene3D G3DSA:3.20.20.70 455 804 2.9E-108 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS14095 4d77df6372fded3309699df0f489224f 1511 Pfam PF01645 Conserved region in glutamate synthase 817 1187 2.6E-149 T 21-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 VFU_RS14095 4d77df6372fded3309699df0f489224f 1511 Gene3D G3DSA:2.160.20.60 1241 1507 1.3E-107 T 21-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 VFU_RS14095 4d77df6372fded3309699df0f489224f 1511 SUPERFAMILY SSF51395 461 1220 1.61E-267 T 21-04-2016 VFU_RS14095 4d77df6372fded3309699df0f489224f 1511 PANTHER PTHR11938 10 1502 0.0 T 21-04-2016 VFU_RS14095 4d77df6372fded3309699df0f489224f 1511 SUPERFAMILY SSF56235 21 447 1.05E-152 T 21-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VFU_RS14095 4d77df6372fded3309699df0f489224f 1511 SUPERFAMILY SSF69336 1235 1498 1.09E-95 T 21-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 VFU_RS14095 4d77df6372fded3309699df0f489224f 1511 Gene3D G3DSA:3.20.20.70 834 1219 1.4E-178 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS02800 98bd1d229ff1e405adce4514cc7e2f40 406 SUPERFAMILY SSF55909 3 406 2.14E-130 T 21-04-2016 VFU_RS02800 98bd1d229ff1e405adce4514cc7e2f40 406 Hamap MF_00242 Arginine deiminase [arcA]. 1 406 44.544 T 21-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VFU_RS02800 98bd1d229ff1e405adce4514cc7e2f40 406 PRINTS PR01466 Bacterial arginine deiminase signature 177 192 4.6E-45 T 21-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VFU_RS02800 98bd1d229ff1e405adce4514cc7e2f40 406 PRINTS PR01466 Bacterial arginine deiminase signature 2 22 4.6E-45 T 21-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VFU_RS02800 98bd1d229ff1e405adce4514cc7e2f40 406 PRINTS PR01466 Bacterial arginine deiminase signature 385 403 4.6E-45 T 21-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VFU_RS02800 98bd1d229ff1e405adce4514cc7e2f40 406 PRINTS PR01466 Bacterial arginine deiminase signature 342 359 4.6E-45 T 21-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VFU_RS02800 98bd1d229ff1e405adce4514cc7e2f40 406 PRINTS PR01466 Bacterial arginine deiminase signature 362 376 4.6E-45 T 21-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VFU_RS02800 98bd1d229ff1e405adce4514cc7e2f40 406 PRINTS PR01466 Bacterial arginine deiminase signature 149 167 4.6E-45 T 21-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VFU_RS02800 98bd1d229ff1e405adce4514cc7e2f40 406 PIRSF PIRSF006356 1 406 2.4E-150 T 21-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VFU_RS02800 98bd1d229ff1e405adce4514cc7e2f40 406 PANTHER PTHR12737 149 291 1.5E-120 T 21-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VFU_RS02800 98bd1d229ff1e405adce4514cc7e2f40 406 PANTHER PTHR12737 309 406 1.5E-120 T 21-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VFU_RS02800 98bd1d229ff1e405adce4514cc7e2f40 406 PANTHER PTHR12737 2 91 1.5E-120 T 21-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VFU_RS02800 98bd1d229ff1e405adce4514cc7e2f40 406 PANTHER PTHR12737:SF13 149 291 1.5E-120 T 21-04-2016 VFU_RS02800 98bd1d229ff1e405adce4514cc7e2f40 406 PANTHER PTHR12737:SF13 309 406 1.5E-120 T 21-04-2016 VFU_RS02800 98bd1d229ff1e405adce4514cc7e2f40 406 PANTHER PTHR12737:SF13 2 91 1.5E-120 T 21-04-2016 VFU_RS02800 98bd1d229ff1e405adce4514cc7e2f40 406 TIGRFAM TIGR01078 arcA: arginine deiminase 4 406 8.7E-162 T 21-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VFU_RS02800 98bd1d229ff1e405adce4514cc7e2f40 406 Gene3D G3DSA:3.75.10.10 149 406 5.7E-129 T 21-04-2016 VFU_RS02800 98bd1d229ff1e405adce4514cc7e2f40 406 Gene3D G3DSA:3.75.10.10 1 67 5.7E-129 T 21-04-2016 VFU_RS02800 98bd1d229ff1e405adce4514cc7e2f40 406 Pfam PF02274 Amidinotransferase 19 403 4.7E-95 T 21-04-2016 VFU_RS07495 1b6b7f2305266cffd3fd589f177d1bf9 514 Gene3D G3DSA:1.20.200.10 204 511 1.3E-101 T 21-04-2016 VFU_RS07495 1b6b7f2305266cffd3fd589f177d1bf9 514 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 145 161 - T 21-04-2016 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 VFU_RS07495 1b6b7f2305266cffd3fd589f177d1bf9 514 PANTHER PTHR10362 1 511 4.1E-185 T 21-04-2016 VFU_RS07495 1b6b7f2305266cffd3fd589f177d1bf9 514 Pfam PF00221 Aromatic amino acid lyase 16 482 4.3E-163 T 21-04-2016 IPR001106 Aromatic amino acid lyase VFU_RS07495 1b6b7f2305266cffd3fd589f177d1bf9 514 PANTHER PTHR10362:SF7 1 511 4.1E-185 T 21-04-2016 VFU_RS07495 1b6b7f2305266cffd3fd589f177d1bf9 514 Gene3D G3DSA:1.10.275.10 3 203 8.3E-65 T 21-04-2016 IPR024083 Fumarase/histidase, N-terminal VFU_RS07495 1b6b7f2305266cffd3fd589f177d1bf9 514 SUPERFAMILY SSF48557 4 512 1.88E-173 T 21-04-2016 IPR008948 L-Aspartase-like GO:0003824 VFU_RS15200 82245f02ad6225e85cf102081f18a5a5 216 Pfam PF04612 Type II secretion system (T2SS), protein M 8 94 1.8E-8 T 21-04-2016 IPR007690 Type II secretion system, protein M GO:0006858 VFU_RS15200 82245f02ad6225e85cf102081f18a5a5 216 Gene3D G3DSA:3.30.70.60 112 192 5.9E-4 T 21-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 VFU_RS14495 88d17b5052aba38efa74ccbdd7bc31ee 853 SUPERFAMILY SSF53150 114 266 4.32E-41 T 21-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 VFU_RS14495 88d17b5052aba38efa74ccbdd7bc31ee 853 Pfam PF05190 MutS family domain IV 427 517 9.9E-31 T 21-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 VFU_RS14495 88d17b5052aba38efa74ccbdd7bc31ee 853 Gene3D G3DSA:3.40.1170.10 4 120 4.2E-51 T 21-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 VFU_RS14495 88d17b5052aba38efa74ccbdd7bc31ee 853 Pfam PF01624 MutS domain I 8 119 3.4E-41 T 21-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 VFU_RS14495 88d17b5052aba38efa74ccbdd7bc31ee 853 Pfam PF05188 MutS domain II 128 253 1.9E-31 T 21-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 VFU_RS14495 88d17b5052aba38efa74ccbdd7bc31ee 853 SMART SM00533 283 590 1.6E-114 T 21-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 VFU_RS14495 88d17b5052aba38efa74ccbdd7bc31ee 853 PANTHER PTHR11361 3 853 0.0 T 21-04-2016 VFU_RS14495 88d17b5052aba38efa74ccbdd7bc31ee 853 Gene3D G3DSA:1.10.1420.10 264 467 6.1E-58 T 21-04-2016 VFU_RS14495 88d17b5052aba38efa74ccbdd7bc31ee 853 SMART SM00534 606 793 6.5E-117 T 21-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 VFU_RS14495 88d17b5052aba38efa74ccbdd7bc31ee 853 Pfam PF00488 MutS domain V 609 796 2.6E-86 T 21-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 VFU_RS14495 88d17b5052aba38efa74ccbdd7bc31ee 853 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 687 703 - T 21-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 VFU_RS14495 88d17b5052aba38efa74ccbdd7bc31ee 853 SUPERFAMILY SSF52540 566 797 1.04E-60 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS14495 88d17b5052aba38efa74ccbdd7bc31ee 853 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 7 851 0.0 T 21-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 VFU_RS14495 88d17b5052aba38efa74ccbdd7bc31ee 853 Gene3D G3DSA:3.40.50.300 566 797 2.6E-83 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS14495 88d17b5052aba38efa74ccbdd7bc31ee 853 SUPERFAMILY SSF48334 267 564 7.72E-95 T 21-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 VFU_RS14495 88d17b5052aba38efa74ccbdd7bc31ee 853 PANTHER PTHR11361:SF86 3 853 0.0 T 21-04-2016 VFU_RS14495 88d17b5052aba38efa74ccbdd7bc31ee 853 Pfam PF05192 MutS domain III 269 558 6.4E-42 T 21-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 VFU_RS14495 88d17b5052aba38efa74ccbdd7bc31ee 853 Gene3D G3DSA:3.30.420.110 127 255 4.3E-41 T 21-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 VFU_RS14495 88d17b5052aba38efa74ccbdd7bc31ee 853 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 7 845 25.464 T 21-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 VFU_RS14495 88d17b5052aba38efa74ccbdd7bc31ee 853 SUPERFAMILY SSF55271 4 113 6.28E-42 T 21-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 VFU_RS01785 5e108e4d7aa43849e66789d893460c71 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 6.0E-53 T 21-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 VFU_RS01785 5e108e4d7aa43849e66789d893460c71 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 19.221 T 21-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 VFU_RS01785 5e108e4d7aa43849e66789d893460c71 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 7.2E-63 T 21-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 VFU_RS01785 5e108e4d7aa43849e66789d893460c71 177 Gene3D G3DSA:1.10.520.20 3 105 1.6E-36 T 21-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain VFU_RS01785 5e108e4d7aa43849e66789d893460c71 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 4.3E-28 T 21-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 VFU_RS01785 5e108e4d7aa43849e66789d893460c71 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 4.3E-28 T 21-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 VFU_RS01785 5e108e4d7aa43849e66789d893460c71 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 4.3E-28 T 21-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 VFU_RS01785 5e108e4d7aa43849e66789d893460c71 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 4.3E-28 T 21-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 VFU_RS01785 5e108e4d7aa43849e66789d893460c71 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 4.3E-28 T 21-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 VFU_RS01785 5e108e4d7aa43849e66789d893460c71 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 21-04-2016 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 VFU_RS01785 5e108e4d7aa43849e66789d893460c71 177 SUPERFAMILY SSF47928 3 105 1.57E-28 T 21-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain VFU_RS01785 5e108e4d7aa43849e66789d893460c71 177 PANTHER PTHR11910 7 176 4.9E-55 T 21-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 VFU_RS07890 bde3aa1b40a8c3155c829d13ba89a6ec 755 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 520 538 - T 21-04-2016 IPR028299 ClpA/B, conserved site 2 VFU_RS07890 bde3aa1b40a8c3155c829d13ba89a6ec 755 Gene3D G3DSA:3.40.50.300 444 664 2.5E-53 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS07890 bde3aa1b40a8c3155c829d13ba89a6ec 755 SMART SM00382 489 656 4.9E-7 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS07890 bde3aa1b40a8c3155c829d13ba89a6ec 755 SMART SM00382 208 353 3.8E-11 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS07890 bde3aa1b40a8c3155c829d13ba89a6ec 755 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 304 316 - T 21-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 VFU_RS07890 bde3aa1b40a8c3155c829d13ba89a6ec 755 PANTHER PTHR11638 1 754 0.0 T 21-04-2016 VFU_RS07890 bde3aa1b40a8c3155c829d13ba89a6ec 755 PANTHER PTHR11638:SF111 1 754 0.0 T 21-04-2016 VFU_RS07890 bde3aa1b40a8c3155c829d13ba89a6ec 755 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 213 326 5.8E-12 T 21-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VFU_RS07890 bde3aa1b40a8c3155c829d13ba89a6ec 755 SUPERFAMILY SSF52540 439 744 3.62E-72 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS07890 bde3aa1b40a8c3155c829d13ba89a6ec 755 Gene3D G3DSA:1.10.8.60 354 438 3.0E-31 T 21-04-2016 VFU_RS07890 bde3aa1b40a8c3155c829d13ba89a6ec 755 Gene3D G3DSA:1.10.1780.10 1 142 4.7E-44 T 21-04-2016 IPR004176 Clp, N-terminal GO:0019538 VFU_RS07890 bde3aa1b40a8c3155c829d13ba89a6ec 755 Gene3D G3DSA:3.40.50.300 170 351 4.0E-41 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS07890 bde3aa1b40a8c3155c829d13ba89a6ec 755 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 3.8E-12 T 21-04-2016 IPR004176 Clp, N-terminal GO:0019538 VFU_RS07890 bde3aa1b40a8c3155c829d13ba89a6ec 755 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 655 735 3.7E-24 T 21-04-2016 IPR019489 Clp ATPase, C-terminal VFU_RS07890 bde3aa1b40a8c3155c829d13ba89a6ec 755 SUPERFAMILY SSF81923 1 142 2.22E-59 T 21-04-2016 IPR004176 Clp, N-terminal GO:0019538 VFU_RS07890 bde3aa1b40a8c3155c829d13ba89a6ec 755 SUPERFAMILY SSF52540 170 423 1.04E-64 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS07890 bde3aa1b40a8c3155c829d13ba89a6ec 755 Gene3D G3DSA:1.10.8.60 665 751 3.5E-30 T 21-04-2016 VFU_RS07890 bde3aa1b40a8c3155c829d13ba89a6ec 755 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 535 553 1.6E-35 T 21-04-2016 IPR001270 ClpA/B family GO:0005524 VFU_RS07890 bde3aa1b40a8c3155c829d13ba89a6ec 755 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 564 582 1.6E-35 T 21-04-2016 IPR001270 ClpA/B family GO:0005524 VFU_RS07890 bde3aa1b40a8c3155c829d13ba89a6ec 755 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 597 611 1.6E-35 T 21-04-2016 IPR001270 ClpA/B family GO:0005524 VFU_RS07890 bde3aa1b40a8c3155c829d13ba89a6ec 755 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 493 511 1.6E-35 T 21-04-2016 IPR001270 ClpA/B family GO:0005524 VFU_RS07890 bde3aa1b40a8c3155c829d13ba89a6ec 755 SMART SM01086 655 744 1.7E-36 T 21-04-2016 IPR019489 Clp ATPase, C-terminal VFU_RS07890 bde3aa1b40a8c3155c829d13ba89a6ec 755 Pfam PF07724 AAA domain (Cdc48 subfamily) 488 648 7.5E-47 T 21-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VFU_RS07890 bde3aa1b40a8c3155c829d13ba89a6ec 755 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 736 0.0 T 21-04-2016 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 VFU_RS12950 b553fc8fc0b62504b6a5ca708e72fa51 202 ProSitePatterns PS00622 LuxR-type HTH domain signature. 157 184 - T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VFU_RS12950 b553fc8fc0b62504b6a5ca708e72fa51 202 Gene3D G3DSA:1.10.10.10 117 196 1.0E-24 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS12950 b553fc8fc0b62504b6a5ca708e72fa51 202 SUPERFAMILY SSF52172 1 125 1.22E-28 T 21-04-2016 IPR011006 CheY-like superfamily VFU_RS12950 b553fc8fc0b62504b6a5ca708e72fa51 202 PANTHER PTHR26402:SF500 2 195 1.8E-89 T 21-04-2016 VFU_RS12950 b553fc8fc0b62504b6a5ca708e72fa51 202 Gene3D G3DSA:3.40.50.2300 1 116 3.5E-29 T 21-04-2016 VFU_RS12950 b553fc8fc0b62504b6a5ca708e72fa51 202 Pfam PF00072 Response regulator receiver domain 4 113 2.1E-24 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS12950 b553fc8fc0b62504b6a5ca708e72fa51 202 PANTHER PTHR26402 2 195 1.8E-89 T 21-04-2016 VFU_RS12950 b553fc8fc0b62504b6a5ca708e72fa51 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 1.2E-11 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VFU_RS12950 b553fc8fc0b62504b6a5ca708e72fa51 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 1.2E-11 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VFU_RS12950 b553fc8fc0b62504b6a5ca708e72fa51 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 1.2E-11 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VFU_RS12950 b553fc8fc0b62504b6a5ca708e72fa51 202 SMART SM00448 2 112 7.4E-27 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS12950 b553fc8fc0b62504b6a5ca708e72fa51 202 SUPERFAMILY SSF46894 124 196 1.16E-19 T 21-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VFU_RS12950 b553fc8fc0b62504b6a5ca708e72fa51 202 SMART SM00421 140 197 1.2E-21 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VFU_RS12950 b553fc8fc0b62504b6a5ca708e72fa51 202 Pfam PF00196 Bacterial regulatory proteins, luxR family 141 196 3.8E-21 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VFU_RS14400 8b9ee00711a4da27b38e4727c6e2b506 201 SUPERFAMILY SSF53955 8 166 6.83E-24 T 21-04-2016 IPR023346 Lysozyme-like domain VFU_RS14400 8b9ee00711a4da27b38e4727c6e2b506 201 Gene3D G3DSA:1.10.530.10 49 164 3.6E-7 T 21-04-2016 VFU_RS02075 7a79c9b485ed6c475e0721a8bc03a72b 570 Gene3D G3DSA:3.30.420.40 9 288 1.0E-36 T 21-04-2016 VFU_RS02075 7a79c9b485ed6c475e0721a8bc03a72b 570 PIRSF PIRSF000538 9 561 5.4E-47 T 21-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 VFU_RS02075 7a79c9b485ed6c475e0721a8bc03a72b 570 Gene3D G3DSA:3.30.420.40 293 555 3.8E-45 T 21-04-2016 VFU_RS02075 7a79c9b485ed6c475e0721a8bc03a72b 570 TIGRFAM TIGR01234 L-ribulokinase: ribulokinase 10 554 1.8E-190 T 21-04-2016 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16|UniPathway: UPA00145 VFU_RS02075 7a79c9b485ed6c475e0721a8bc03a72b 570 PANTHER PTHR10196:SF62 11 541 1.8E-237 T 21-04-2016 VFU_RS02075 7a79c9b485ed6c475e0721a8bc03a72b 570 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 11 287 1.6E-16 T 21-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 VFU_RS02075 7a79c9b485ed6c475e0721a8bc03a72b 570 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 297 507 1.0E-34 T 21-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 VFU_RS02075 7a79c9b485ed6c475e0721a8bc03a72b 570 PANTHER PTHR10196 11 541 1.8E-237 T 21-04-2016 VFU_RS02075 7a79c9b485ed6c475e0721a8bc03a72b 570 Hamap MF_00520 Ribulokinase [araB]. 8 564 45.211 T 21-04-2016 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16|UniPathway: UPA00145 VFU_RS02075 7a79c9b485ed6c475e0721a8bc03a72b 570 SUPERFAMILY SSF53067 10 290 2.36E-28 T 21-04-2016 VFU_RS02075 7a79c9b485ed6c475e0721a8bc03a72b 570 SUPERFAMILY SSF53067 293 554 2.37E-45 T 21-04-2016 VFU_RS05180 f26dc72787131fbd793b296187fb4fdb 129 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 2 129 31.111 T 21-04-2016 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 VFU_RS05180 f26dc72787131fbd793b296187fb4fdb 129 Pfam PF07417 Transcriptional regulator Crl 6 123 6.4E-50 T 21-04-2016 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 VFU_RS11705 cbd66f177c2cae7bbe441ee54d0d9862 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 2.7E-23 T 21-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VFU_RS11705 cbd66f177c2cae7bbe441ee54d0d9862 164 Gene3D G3DSA:3.30.70.920 65 161 1.3E-32 T 21-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VFU_RS11705 cbd66f177c2cae7bbe441ee54d0d9862 164 PANTHER PTHR30154:SF0 4 162 2.6E-106 T 21-04-2016 VFU_RS11705 cbd66f177c2cae7bbe441ee54d0d9862 164 Gene3D G3DSA:1.10.10.10 13 64 6.3E-27 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS11705 cbd66f177c2cae7bbe441ee54d0d9862 164 SUPERFAMILY SSF54909 74 158 1.34E-21 T 21-04-2016 IPR011008 Dimeric alpha-beta barrel VFU_RS11705 cbd66f177c2cae7bbe441ee54d0d9862 164 SUPERFAMILY SSF46785 12 70 2.17E-19 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS11705 cbd66f177c2cae7bbe441ee54d0d9862 164 PANTHER PTHR30154 4 162 2.6E-106 T 21-04-2016 VFU_RS11705 cbd66f177c2cae7bbe441ee54d0d9862 164 SMART SM00344 12 121 7.3E-55 T 21-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VFU_RS11705 cbd66f177c2cae7bbe441ee54d0d9862 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 9.1E-23 T 21-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VFU_RS11705 cbd66f177c2cae7bbe441ee54d0d9862 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 9.1E-23 T 21-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VFU_RS11705 cbd66f177c2cae7bbe441ee54d0d9862 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 9.1E-23 T 21-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VFU_RS11705 cbd66f177c2cae7bbe441ee54d0d9862 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 59 6.1E-22 T 21-04-2016 VFU_RS11705 cbd66f177c2cae7bbe441ee54d0d9862 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 21-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VFU_RS01165 6d868532e2ac9b1e9b34b08c3d03a0dd 218 PANTHER PTHR30086 2 217 2.6E-86 T 21-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VFU_RS01165 6d868532e2ac9b1e9b34b08c3d03a0dd 218 PANTHER PTHR30086:SF13 2 217 2.6E-86 T 21-04-2016 VFU_RS01165 6d868532e2ac9b1e9b34b08c3d03a0dd 218 Pfam PF01810 LysE type translocator 16 210 1.7E-38 T 21-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VFU_RS01165 6d868532e2ac9b1e9b34b08c3d03a0dd 218 PIRSF PIRSF006324 1 213 1.1E-48 T 21-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VFU_RS04490 41712f772f0e0d4c7a989024ac17a940 556 Gene3D G3DSA:3.90.76.10 43 192 2.9E-40 T 21-04-2016 VFU_RS04490 41712f772f0e0d4c7a989024ac17a940 556 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 80 102 - T 21-04-2016 IPR023765 Solute-binding protein family 5, conserved site VFU_RS04490 41712f772f0e0d4c7a989024ac17a940 556 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 75 452 1.0E-77 T 21-04-2016 IPR000914 Solute-binding protein family 5 domain VFU_RS04490 41712f772f0e0d4c7a989024ac17a940 556 SUPERFAMILY SSF53850 40 539 3.26E-107 T 21-04-2016 VFU_RS04490 41712f772f0e0d4c7a989024ac17a940 556 Gene3D G3DSA:3.10.105.10 270 511 1.3E-50 T 21-04-2016 VFU_RS04490 41712f772f0e0d4c7a989024ac17a940 556 PANTHER PTHR30290 42 539 1.0E-162 T 21-04-2016 VFU_RS04490 41712f772f0e0d4c7a989024ac17a940 556 PANTHER PTHR30290:SF31 42 539 1.0E-162 T 21-04-2016 VFU_RS04490 41712f772f0e0d4c7a989024ac17a940 556 PIRSF PIRSF002741 7 533 2.2E-66 T 21-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VFU_RS10745 4fb00744684f8b1e9c675fbb8d59d4f3 595 SMART SM00382 375 564 8.1E-12 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS10745 4fb00744684f8b1e9c675fbb8d59d4f3 595 SUPERFAMILY SSF52540 347 580 1.66E-58 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS10745 4fb00744684f8b1e9c675fbb8d59d4f3 595 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS10745 4fb00744684f8b1e9c675fbb8d59d4f3 595 Pfam PF00005 ABC transporter 369 512 6.6E-28 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS10745 4fb00744684f8b1e9c675fbb8d59d4f3 595 SUPERFAMILY SSF90123 12 329 1.07E-55 T 21-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VFU_RS10745 4fb00744684f8b1e9c675fbb8d59d4f3 595 PANTHER PTHR24221 1 593 0.0 T 21-04-2016 VFU_RS10745 4fb00744684f8b1e9c675fbb8d59d4f3 595 Pfam PF00664 ABC transporter transmembrane region 25 292 9.1E-41 T 21-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VFU_RS10745 4fb00744684f8b1e9c675fbb8d59d4f3 595 PANTHER PTHR24221:SF261 1 593 0.0 T 21-04-2016 VFU_RS10745 4fb00744684f8b1e9c675fbb8d59d4f3 595 Gene3D G3DSA:3.40.50.300 358 587 6.5E-56 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS10745 4fb00744684f8b1e9c675fbb8d59d4f3 595 Gene3D G3DSA:1.20.1560.10 12 329 3.6E-48 T 21-04-2016 VFU_RS10745 4fb00744684f8b1e9c675fbb8d59d4f3 595 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 20 554 2.7E-173 T 21-04-2016 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 VFU_RS09330 eacde3d5dc0c423ac8b9c99956017eac 328 PANTHER PTHR40252:SF2 1 326 1.2E-111 T 21-04-2016 VFU_RS09330 eacde3d5dc0c423ac8b9c99956017eac 328 Pfam PF10442 FIST C domain 160 306 2.2E-17 T 21-04-2016 IPR019494 FIST, C-domain VFU_RS09330 eacde3d5dc0c423ac8b9c99956017eac 328 PANTHER PTHR40252 1 326 1.2E-111 T 21-04-2016 VFU_RS09330 eacde3d5dc0c423ac8b9c99956017eac 328 SMART SM01204 160 307 9.2E-28 T 21-04-2016 IPR019494 FIST, C-domain VFU_RS09330 eacde3d5dc0c423ac8b9c99956017eac 328 Pfam PF08495 FIST N domain 12 158 5.4E-17 T 21-04-2016 IPR013702 FIST domain, N-terminal VFU_RS09330 eacde3d5dc0c423ac8b9c99956017eac 328 SMART SM00897 12 159 1.4E-6 T 21-04-2016 IPR013702 FIST domain, N-terminal VFU_RS13675 2b227e40997bf74cd50a02cdcec67ce6 304 Pfam PF04381 Putative exonuclease, RdgC 1 298 4.1E-124 T 21-04-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 VFU_RS13675 2b227e40997bf74cd50a02cdcec67ce6 304 PANTHER PTHR38103 2 304 4.6E-159 T 21-04-2016 VFU_RS13675 2b227e40997bf74cd50a02cdcec67ce6 304 PANTHER PTHR38103:SF1 2 304 4.6E-159 T 21-04-2016 VFU_RS13675 2b227e40997bf74cd50a02cdcec67ce6 304 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 301 38.694 T 21-04-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 VFU_RS11430 119e2bf008f69aea1dc487c1305da866 205 PANTHER PTHR33796 2 205 4.7E-83 T 21-04-2016 VFU_RS11430 119e2bf008f69aea1dc487c1305da866 205 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 205 31.658 T 21-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 VFU_RS11430 119e2bf008f69aea1dc487c1305da866 205 SUPERFAMILY SSF47781 66 136 4.89E-20 T 21-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 VFU_RS11430 119e2bf008f69aea1dc487c1305da866 205 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 204 6.3E-65 T 21-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 VFU_RS11430 119e2bf008f69aea1dc487c1305da866 205 SUPERFAMILY SSF46929 159 204 2.62E-12 T 21-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 VFU_RS11430 119e2bf008f69aea1dc487c1305da866 205 Pfam PF07499 RuvA, C-terminal domain 161 204 8.2E-18 T 21-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 VFU_RS11430 119e2bf008f69aea1dc487c1305da866 205 SMART SM00278 73 92 160.0 T 21-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VFU_RS11430 119e2bf008f69aea1dc487c1305da866 205 SMART SM00278 108 127 0.071 T 21-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VFU_RS11430 119e2bf008f69aea1dc487c1305da866 205 Pfam PF14520 Helix-hairpin-helix domain 72 130 2.1E-14 T 21-04-2016 VFU_RS11430 119e2bf008f69aea1dc487c1305da866 205 Gene3D G3DSA:2.40.50.140 2 65 1.9E-27 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS11430 119e2bf008f69aea1dc487c1305da866 205 Gene3D G3DSA:1.10.8.10 159 205 5.4E-24 T 21-04-2016 VFU_RS11430 119e2bf008f69aea1dc487c1305da866 205 Pfam PF01330 RuvA N terminal domain 2 62 3.0E-21 T 21-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 VFU_RS11430 119e2bf008f69aea1dc487c1305da866 205 SUPERFAMILY SSF50249 2 63 3.94E-18 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS11430 119e2bf008f69aea1dc487c1305da866 205 Gene3D G3DSA:1.10.150.20 67 142 1.1E-29 T 21-04-2016 VFU_RS08425 5b89b87072d023cc2fad4f907764b964 203 PRINTS PR01021 OMPA domain signature 129 145 3.2E-11 T 21-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VFU_RS08425 5b89b87072d023cc2fad4f907764b964 203 PRINTS PR01021 OMPA domain signature 84 106 3.2E-11 T 21-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VFU_RS08425 5b89b87072d023cc2fad4f907764b964 203 PRINTS PR01021 OMPA domain signature 114 129 3.2E-11 T 21-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VFU_RS08425 5b89b87072d023cc2fad4f907764b964 203 SUPERFAMILY SSF103088 57 183 1.57E-32 T 21-04-2016 IPR006665 OmpA-like domain VFU_RS08425 5b89b87072d023cc2fad4f907764b964 203 PANTHER PTHR30128 29 201 5.4E-55 T 21-04-2016 VFU_RS08425 5b89b87072d023cc2fad4f907764b964 203 Gene3D G3DSA:4.10.1080.10 35 73 1.3E-5 T 21-04-2016 IPR028974 TSP type-3 repeat GO:0005509 VFU_RS08425 5b89b87072d023cc2fad4f907764b964 203 Gene3D G3DSA:3.30.1330.60 77 185 2.4E-33 T 21-04-2016 IPR006665 OmpA-like domain VFU_RS08425 5b89b87072d023cc2fad4f907764b964 203 PANTHER PTHR30128:SF15 29 201 5.4E-55 T 21-04-2016 VFU_RS08425 5b89b87072d023cc2fad4f907764b964 203 Pfam PF00691 OmpA family 83 178 1.0E-21 T 21-04-2016 IPR006665 OmpA-like domain VFU_RS08425 5b89b87072d023cc2fad4f907764b964 203 SUPERFAMILY SSF103647 22 70 2.62E-8 T 21-04-2016 IPR028974 TSP type-3 repeat GO:0005509 VFU_RS04740 3cbcdd23bd530147afb5a08f81f59718 344 SUPERFAMILY SSF51430 1 344 1.57E-107 T 21-04-2016 IPR023210 NADP-dependent oxidoreductase domain VFU_RS04740 3cbcdd23bd530147afb5a08f81f59718 344 PANTHER PTHR11732:SF112 1 137 1.1E-204 T 21-04-2016 VFU_RS04740 3cbcdd23bd530147afb5a08f81f59718 344 PANTHER PTHR11732:SF112 155 344 1.1E-204 T 21-04-2016 VFU_RS04740 3cbcdd23bd530147afb5a08f81f59718 344 Pfam PF00248 Aldo/keto reductase family 15 335 3.5E-72 T 21-04-2016 IPR023210 NADP-dependent oxidoreductase domain VFU_RS04740 3cbcdd23bd530147afb5a08f81f59718 344 Gene3D G3DSA:3.20.20.100 1 343 6.6E-105 T 21-04-2016 IPR023210 NADP-dependent oxidoreductase domain VFU_RS04740 3cbcdd23bd530147afb5a08f81f59718 344 PANTHER PTHR11732 1 137 1.1E-204 T 21-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta VFU_RS04740 3cbcdd23bd530147afb5a08f81f59718 344 PANTHER PTHR11732 155 344 1.1E-204 T 21-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta VFU_RS03160 a792bd1bbaf6e54b7ad5e9f18f5ee011 338 PANTHER PTHR10055 2 338 9.2E-175 T 21-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 VFU_RS03160 a792bd1bbaf6e54b7ad5e9f18f5ee011 338 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 335 40.291 T 21-04-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 VFU_RS03160 a792bd1bbaf6e54b7ad5e9f18f5ee011 338 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 334 7.9E-106 T 21-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 VFU_RS03160 a792bd1bbaf6e54b7ad5e9f18f5ee011 338 Gene3D G3DSA:1.10.240.10 209 328 8.4E-18 T 21-04-2016 VFU_RS03160 a792bd1bbaf6e54b7ad5e9f18f5ee011 338 Pfam PF00579 tRNA synthetases class I (W and Y) 3 289 7.7E-77 T 21-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VFU_RS03160 a792bd1bbaf6e54b7ad5e9f18f5ee011 338 SUPERFAMILY SSF52374 5 334 2.65E-89 T 21-04-2016 VFU_RS03160 a792bd1bbaf6e54b7ad5e9f18f5ee011 338 PANTHER PTHR10055:SF10 2 338 9.2E-175 T 21-04-2016 VFU_RS03160 a792bd1bbaf6e54b7ad5e9f18f5ee011 338 Gene3D G3DSA:3.40.50.620 4 208 1.0E-84 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VFU_RS03160 a792bd1bbaf6e54b7ad5e9f18f5ee011 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 5.1E-26 T 21-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 VFU_RS03160 a792bd1bbaf6e54b7ad5e9f18f5ee011 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 5.1E-26 T 21-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 VFU_RS03160 a792bd1bbaf6e54b7ad5e9f18f5ee011 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 198 208 5.1E-26 T 21-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 VFU_RS03160 a792bd1bbaf6e54b7ad5e9f18f5ee011 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 5.1E-26 T 21-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 VFU_RS00865 6ae0733f6bcf17fd7b14c264d51f1278 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 1.1E-23 T 21-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 VFU_RS00865 6ae0733f6bcf17fd7b14c264d51f1278 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 21-04-2016 IPR018336 Ribonuclease PH, conserved site VFU_RS00865 6ae0733f6bcf17fd7b14c264d51f1278 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 4.4E-111 T 21-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 VFU_RS00865 6ae0733f6bcf17fd7b14c264d51f1278 238 PANTHER PTHR11953 1 238 1.5E-87 T 21-04-2016 VFU_RS00865 6ae0733f6bcf17fd7b14c264d51f1278 238 Hamap MF_00564 Ribonuclease PH [rph]. 1 237 48.091 T 21-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 VFU_RS00865 6ae0733f6bcf17fd7b14c264d51f1278 238 Gene3D G3DSA:3.30.230.70 6 235 2.3E-35 T 21-04-2016 IPR027408 PNPase/RNase PH domain VFU_RS00865 6ae0733f6bcf17fd7b14c264d51f1278 238 PANTHER PTHR11953:SF0 1 238 1.5E-87 T 21-04-2016 VFU_RS00865 6ae0733f6bcf17fd7b14c264d51f1278 238 SUPERFAMILY SSF55666 153 236 1.17E-25 T 21-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 VFU_RS00865 6ae0733f6bcf17fd7b14c264d51f1278 238 Pfam PF03725 3' exoribonuclease family, domain 2 159 224 2.2E-10 T 21-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 VFU_RS00865 6ae0733f6bcf17fd7b14c264d51f1278 238 SUPERFAMILY SSF54211 1 181 2.78E-43 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VFU_RS13665 41994fcaafe8ff673d4054f954d8a855 432 Gene3D G3DSA:3.30.565.10 259 427 1.2E-41 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS13665 41994fcaafe8ff673d4054f954d8a855 432 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 94 424 5.9E-138 T 21-04-2016 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 VFU_RS13665 41994fcaafe8ff673d4054f954d8a855 432 PANTHER PTHR24423:SF554 1 432 2.7E-215 T 21-04-2016 VFU_RS13665 41994fcaafe8ff673d4054f954d8a855 432 SMART SM00388 205 272 2.7E-20 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS13665 41994fcaafe8ff673d4054f954d8a855 432 Pfam PF00989 PAS fold 99 179 1.9E-8 T 21-04-2016 IPR013767 PAS fold GO:0006355 VFU_RS13665 41994fcaafe8ff673d4054f954d8a855 432 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 271 5.0E-16 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS13665 41994fcaafe8ff673d4054f954d8a855 432 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 318 427 2.2E-21 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS13665 41994fcaafe8ff673d4054f954d8a855 432 Gene3D G3DSA:3.30.450.20 98 196 7.2E-11 T 21-04-2016 VFU_RS13665 41994fcaafe8ff673d4054f954d8a855 432 Pfam PF11808 Domain of unknown function (DUF3329) 7 91 2.1E-31 T 21-04-2016 IPR021766 Protein of unknown function DUF3329 GO:0004673 VFU_RS13665 41994fcaafe8ff673d4054f954d8a855 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 6.0E-13 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS13665 41994fcaafe8ff673d4054f954d8a855 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 426 6.0E-13 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS13665 41994fcaafe8ff673d4054f954d8a855 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 407 6.0E-13 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS13665 41994fcaafe8ff673d4054f954d8a855 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 6.0E-13 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS13665 41994fcaafe8ff673d4054f954d8a855 432 SMART SM00091 98 164 5.2E-6 T 21-04-2016 IPR000014 PAS domain VFU_RS13665 41994fcaafe8ff673d4054f954d8a855 432 Gene3D G3DSA:1.10.287.130 197 258 1.9E-19 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS13665 41994fcaafe8ff673d4054f954d8a855 432 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 99 204 3.4E-6 T 21-04-2016 IPR000014 PAS domain VFU_RS13665 41994fcaafe8ff673d4054f954d8a855 432 SMART SM00387 317 429 4.2E-33 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS13665 41994fcaafe8ff673d4054f954d8a855 432 PANTHER PTHR24423 1 432 2.7E-215 T 21-04-2016 VFU_RS13665 41994fcaafe8ff673d4054f954d8a855 432 SUPERFAMILY SSF47384 192 271 1.92E-18 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS13665 41994fcaafe8ff673d4054f954d8a855 432 SUPERFAMILY SSF55785 86 197 3.49E-11 T 21-04-2016 IPR000014 PAS domain VFU_RS13665 41994fcaafe8ff673d4054f954d8a855 432 SUPERFAMILY SSF55874 261 427 1.26E-40 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS13185 4bcb1c27bae87bd7eac73efac330a123 189 PANTHER PTHR11079:SF72 12 159 2.6E-49 T 21-04-2016 VFU_RS13185 4bcb1c27bae87bd7eac73efac330a123 189 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 61 98 - T 21-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VFU_RS13185 4bcb1c27bae87bd7eac73efac330a123 189 Pfam PF14437 MafB19-like deaminase 12 157 1.2E-32 T 21-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 VFU_RS13185 4bcb1c27bae87bd7eac73efac330a123 189 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 16 157 45.386 T 21-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 VFU_RS13185 4bcb1c27bae87bd7eac73efac330a123 189 Gene3D G3DSA:3.40.140.10 9 155 1.5E-58 T 21-04-2016 VFU_RS13185 4bcb1c27bae87bd7eac73efac330a123 189 PANTHER PTHR11079 12 159 2.6E-49 T 21-04-2016 VFU_RS13185 4bcb1c27bae87bd7eac73efac330a123 189 SUPERFAMILY SSF53927 9 161 2.17E-55 T 21-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 VFU_RS06440 ecc5a9b547886c4fa57662d02d86efca 291 SUPERFAMILY SSF81324 22 235 3.14E-52 T 21-04-2016 VFU_RS06440 ecc5a9b547886c4fa57662d02d86efca 291 PANTHER PTHR11537 1 275 2.8E-99 T 21-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VFU_RS06440 ecc5a9b547886c4fa57662d02d86efca 291 PANTHER PTHR11537:SF137 1 275 2.8E-99 T 21-04-2016 VFU_RS06440 ecc5a9b547886c4fa57662d02d86efca 291 PRINTS PR00169 Potassium channel signature 84 104 3.2E-39 T 21-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VFU_RS06440 ecc5a9b547886c4fa57662d02d86efca 291 PRINTS PR00169 Potassium channel signature 207 233 3.2E-39 T 21-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VFU_RS06440 ecc5a9b547886c4fa57662d02d86efca 291 PRINTS PR00169 Potassium channel signature 120 146 3.2E-39 T 21-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VFU_RS06440 ecc5a9b547886c4fa57662d02d86efca 291 PRINTS PR00169 Potassium channel signature 16 44 3.2E-39 T 21-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VFU_RS06440 ecc5a9b547886c4fa57662d02d86efca 291 PRINTS PR00169 Potassium channel signature 149 172 3.2E-39 T 21-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VFU_RS06440 ecc5a9b547886c4fa57662d02d86efca 291 PRINTS PR00169 Potassium channel signature 178 200 3.2E-39 T 21-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VFU_RS06440 ecc5a9b547886c4fa57662d02d86efca 291 PRINTS PR00169 Potassium channel signature 58 81 3.2E-39 T 21-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VFU_RS06440 ecc5a9b547886c4fa57662d02d86efca 291 Gene3D G3DSA:1.10.287.70 23 233 8.9E-55 T 21-04-2016 VFU_RS06440 ecc5a9b547886c4fa57662d02d86efca 291 Pfam PF00520 Ion transport protein 23 235 4.6E-31 T 21-04-2016 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 VFU_RS05905 1e5d54b5a085ff75a994dd3cfea6472b 136 PANTHER PTHR34773 1 128 2.4E-42 T 21-04-2016 VFU_RS05905 1e5d54b5a085ff75a994dd3cfea6472b 136 SUPERFAMILY SSF101116 6 127 1.7E-38 T 21-04-2016 IPR003713 Flagellar protein FliS GO:0044780 VFU_RS05905 1e5d54b5a085ff75a994dd3cfea6472b 136 Pfam PF02561 Flagellar protein FliS 6 122 4.1E-37 T 21-04-2016 IPR003713 Flagellar protein FliS GO:0044780 VFU_RS05905 1e5d54b5a085ff75a994dd3cfea6472b 136 PIRSF PIRSF039090 1 133 8.2E-43 T 21-04-2016 IPR003713 Flagellar protein FliS GO:0044780 VFU_RS05905 1e5d54b5a085ff75a994dd3cfea6472b 136 Gene3D G3DSA:1.20.120.340 6 127 3.2E-41 T 21-04-2016 IPR003713 Flagellar protein FliS GO:0044780 VFU_RS05905 1e5d54b5a085ff75a994dd3cfea6472b 136 TIGRFAM TIGR00208 fliS: flagellar protein FliS 4 122 1.0E-22 T 21-04-2016 IPR003713 Flagellar protein FliS GO:0044780 VFU_RS05530 9264c40cae31fa44d66290b502f6d78d 235 PANTHER PTHR30435 17 224 7.5E-59 T 21-04-2016 VFU_RS05530 9264c40cae31fa44d66290b502f6d78d 235 PANTHER PTHR30435:SF15 17 224 7.5E-59 T 21-04-2016 VFU_RS05530 9264c40cae31fa44d66290b502f6d78d 235 Pfam PF13861 FlgD Tudor-like domain 93 229 3.4E-14 T 21-04-2016 IPR025963 FlgD Tudor-like domain VFU_RS05530 9264c40cae31fa44d66290b502f6d78d 235 Pfam PF03963 Flagellar hook capping protein - N-terminal region 20 84 6.7E-22 T 21-04-2016 IPR005648 Flagellar hook capping protein VFU_RS05530 9264c40cae31fa44d66290b502f6d78d 235 Pfam PF13860 FlgD Ig-like domain 118 184 2.5E-19 T 21-04-2016 IPR025965 FlgD Ig-like domain VFU_RS12640 abbd603274734af2e475a2501e47eb11 378 PANTHER PTHR11113:SF7 1 374 7.5E-171 T 21-04-2016 VFU_RS12640 abbd603274734af2e475a2501e47eb11 378 SUPERFAMILY SSF51556 54 347 2.6E-101 T 21-04-2016 IPR032466 Metal-dependent hydrolase VFU_RS12640 abbd603274734af2e475a2501e47eb11 378 Gene3D G3DSA:2.30.40.10 2 54 1.9E-10 T 21-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VFU_RS12640 abbd603274734af2e475a2501e47eb11 378 Gene3D G3DSA:2.30.40.10 347 363 1.9E-10 T 21-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VFU_RS12640 abbd603274734af2e475a2501e47eb11 378 Pfam PF01979 Amidohydrolase family 51 374 3.6E-37 T 21-04-2016 IPR006680 Amidohydrolase-related GO:0016787 VFU_RS12640 abbd603274734af2e475a2501e47eb11 378 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 374 5.2E-159 T 21-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 VFU_RS12640 abbd603274734af2e475a2501e47eb11 378 PIRSF PIRSF038994 1 378 1.0E-119 T 21-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 VFU_RS12640 abbd603274734af2e475a2501e47eb11 378 SUPERFAMILY SSF51338 1 53 4.08E-19 T 21-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VFU_RS12640 abbd603274734af2e475a2501e47eb11 378 PANTHER PTHR11113 1 374 7.5E-171 T 21-04-2016 VFU_RS12640 abbd603274734af2e475a2501e47eb11 378 Gene3D G3DSA:3.20.20.140 55 346 2.3E-100 T 21-04-2016 VFU_RS03990 61fdaba6230469544555bb841cd05bba 319 PANTHER PTHR30118 14 319 1.1E-152 T 21-04-2016 VFU_RS03990 61fdaba6230469544555bb841cd05bba 319 Gene3D G3DSA:3.40.190.10 189 281 2.6E-15 T 21-04-2016 VFU_RS03990 61fdaba6230469544555bb841cd05bba 319 SUPERFAMILY SSF46785 22 99 2.95E-20 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS03990 61fdaba6230469544555bb841cd05bba 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 84 1.2E-18 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS03990 61fdaba6230469544555bb841cd05bba 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.4E-7 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS03990 61fdaba6230469544555bb841cd05bba 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 61 72 1.4E-7 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS03990 61fdaba6230469544555bb841cd05bba 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 61 1.4E-7 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS03990 61fdaba6230469544555bb841cd05bba 319 Gene3D G3DSA:1.10.10.10 17 101 4.9E-34 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS03990 61fdaba6230469544555bb841cd05bba 319 Gene3D G3DSA:3.40.190.10 106 188 4.5E-25 T 21-04-2016 VFU_RS03990 61fdaba6230469544555bb841cd05bba 319 Gene3D G3DSA:3.40.190.10 287 314 4.5E-25 T 21-04-2016 VFU_RS03990 61fdaba6230469544555bb841cd05bba 319 SUPERFAMILY SSF53850 106 309 8.51E-40 T 21-04-2016 VFU_RS03990 61fdaba6230469544555bb841cd05bba 319 PANTHER PTHR30118:SF6 14 319 1.1E-152 T 21-04-2016 VFU_RS03990 61fdaba6230469544555bb841cd05bba 319 Pfam PF03466 LysR substrate binding domain 124 308 1.7E-23 T 21-04-2016 IPR005119 LysR, substrate-binding VFU_RS13700 23e2b688f272231890ec95db3d92bb55 194 Pfam PF04545 Sigma-70, region 4 139 186 2.3E-14 T 21-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS13700 23e2b688f272231890ec95db3d92bb55 194 PANTHER PTHR30173:SF31 3 192 1.6E-63 T 21-04-2016 VFU_RS13700 23e2b688f272231890ec95db3d92bb55 194 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 28 187 6.8E-29 T 21-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS13700 23e2b688f272231890ec95db3d92bb55 194 PANTHER PTHR30173 3 192 1.6E-63 T 21-04-2016 VFU_RS13700 23e2b688f272231890ec95db3d92bb55 194 Gene3D G3DSA:1.10.1740.10 10 115 6.0E-24 T 21-04-2016 VFU_RS13700 23e2b688f272231890ec95db3d92bb55 194 Gene3D G3DSA:1.10.10.10 127 190 1.8E-18 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS13700 23e2b688f272231890ec95db3d92bb55 194 Pfam PF04542 Sigma-70 region 2 37 99 6.3E-16 T 21-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS13700 23e2b688f272231890ec95db3d92bb55 194 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 54 86 - T 21-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS13700 23e2b688f272231890ec95db3d92bb55 194 SUPERFAMILY SSF88659 127 188 8.04E-15 T 21-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS13700 23e2b688f272231890ec95db3d92bb55 194 SUPERFAMILY SSF88946 7 118 1.41E-25 T 21-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS03645 84d75126990a451324aca35da02ce968 321 PANTHER PTHR10846 19 317 6.4E-83 T 21-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 VFU_RS03645 84d75126990a451324aca35da02ce968 321 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 3 311 1.3E-84 T 21-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 VFU_RS03645 84d75126990a451324aca35da02ce968 321 Pfam PF01699 Sodium/calcium exchanger protein 175 316 2.6E-27 T 21-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 VFU_RS03645 84d75126990a451324aca35da02ce968 321 Pfam PF01699 Sodium/calcium exchanger protein 5 143 2.2E-27 T 21-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 VFU_RS05700 60c85242b00e9d29b306306c18f233de 362 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 359 2.6E-170 T 21-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 VFU_RS05700 60c85242b00e9d29b306306c18f233de 362 PANTHER PTHR11075 1 358 1.2E-180 T 21-04-2016 VFU_RS05700 60c85242b00e9d29b306306c18f233de 362 SUPERFAMILY SSF75620 12 355 3.01E-136 T 21-04-2016 VFU_RS05700 60c85242b00e9d29b306306c18f233de 362 PANTHER PTHR11075:SF9 1 358 1.2E-180 T 21-04-2016 VFU_RS05700 60c85242b00e9d29b306306c18f233de 362 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 40.483 T 21-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 VFU_RS05700 60c85242b00e9d29b306306c18f233de 362 Gene3D G3DSA:3.30.160.20 217 290 4.7E-36 T 21-04-2016 IPR014720 Double-stranded RNA-binding domain VFU_RS05700 60c85242b00e9d29b306306c18f233de 362 Pfam PF00472 RF-1 domain 218 323 1.2E-41 T 21-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VFU_RS05700 60c85242b00e9d29b306306c18f233de 362 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 21-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VFU_RS05700 60c85242b00e9d29b306306c18f233de 362 Gene3D G3DSA:1.20.58.410 7 94 9.4E-25 T 21-04-2016 VFU_RS05700 60c85242b00e9d29b306306c18f233de 362 Pfam PF03462 PCRF domain 13 205 1.5E-76 T 21-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 VFU_RS05700 60c85242b00e9d29b306306c18f233de 362 SMART SM00937 67 180 2.0E-67 T 21-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 VFU_RS08445 9a28b2cc0690a456287c821c18036552 414 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 3 145 2.8E-32 T 21-04-2016 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 VFU_RS08445 9a28b2cc0690a456287c821c18036552 414 Gene3D G3DSA:3.40.50.720 2 196 1.3E-31 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS08445 9a28b2cc0690a456287c821c18036552 414 SUPERFAMILY SSF51735 1 179 1.09E-17 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS08445 9a28b2cc0690a456287c821c18036552 414 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 149 394 1.1E-28 T 21-04-2016 IPR032095 Saccharopine dehydrogenase, C-terminal VFU_RS08445 9a28b2cc0690a456287c821c18036552 414 PANTHER PTHR12286 3 410 3.6E-155 T 21-04-2016 VFU_RS08445 9a28b2cc0690a456287c821c18036552 414 PANTHER PTHR12286:SF6 3 410 3.6E-155 T 21-04-2016 VFU_RS05235 0b7ac50d83cbbb30dd7b162f93ea70e8 126 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 126 29.307 T 21-04-2016 IPR020911 Uncharacterised protein family UPF0325 VFU_RS05235 0b7ac50d83cbbb30dd7b162f93ea70e8 126 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 126 9.0E-60 T 21-04-2016 IPR020911 Uncharacterised protein family UPF0325 VFU_RS05235 0b7ac50d83cbbb30dd7b162f93ea70e8 126 Pfam PF11944 Protein of unknown function (DUF3461) 1 126 7.8E-56 T 21-04-2016 IPR020911 Uncharacterised protein family UPF0325 VFU_RS07180 55906413f21fb4ff5498dd45e07688a7 1030 Gene3D G3DSA:3.40.228.10 469 569 6.1E-42 T 21-04-2016 VFU_RS07180 55906413f21fb4ff5498dd45e07688a7 1030 Gene3D G3DSA:3.40.228.10 265 379 6.1E-42 T 21-04-2016 VFU_RS07180 55906413f21fb4ff5498dd45e07688a7 1030 Pfam PF00384 Molybdopterin oxidoreductase 244 693 1.2E-21 T 21-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 VFU_RS07180 55906413f21fb4ff5498dd45e07688a7 1030 SUPERFAMILY SSF53706 69 111 2.17E-117 T 21-04-2016 VFU_RS07180 55906413f21fb4ff5498dd45e07688a7 1030 SUPERFAMILY SSF53706 138 900 2.17E-117 T 21-04-2016 VFU_RS07180 55906413f21fb4ff5498dd45e07688a7 1030 Gene3D G3DSA:2.20.25.90 71 158 1.7E-12 T 21-04-2016 VFU_RS07180 55906413f21fb4ff5498dd45e07688a7 1030 PANTHER PTHR11615 71 106 8.6E-135 T 21-04-2016 VFU_RS07180 55906413f21fb4ff5498dd45e07688a7 1030 PANTHER PTHR11615 126 186 8.6E-135 T 21-04-2016 VFU_RS07180 55906413f21fb4ff5498dd45e07688a7 1030 PANTHER PTHR11615 558 765 8.6E-135 T 21-04-2016 VFU_RS07180 55906413f21fb4ff5498dd45e07688a7 1030 PANTHER PTHR11615 208 371 8.6E-135 T 21-04-2016 VFU_RS07180 55906413f21fb4ff5498dd45e07688a7 1030 PANTHER PTHR11615 419 494 8.6E-135 T 21-04-2016 VFU_RS07180 55906413f21fb4ff5498dd45e07688a7 1030 PANTHER PTHR11615 802 1029 8.6E-135 T 21-04-2016 VFU_RS07180 55906413f21fb4ff5498dd45e07688a7 1030 Gene3D G3DSA:3.40.50.740 720 739 6.4E-29 T 21-04-2016 VFU_RS07180 55906413f21fb4ff5498dd45e07688a7 1030 Gene3D G3DSA:3.40.50.740 159 264 6.4E-29 T 21-04-2016 VFU_RS07180 55906413f21fb4ff5498dd45e07688a7 1030 Gene3D G3DSA:3.40.50.740 619 688 6.4E-29 T 21-04-2016 VFU_RS07180 55906413f21fb4ff5498dd45e07688a7 1030 SMART SM00926 72 154 1.0E-12 T 21-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 VFU_RS07180 55906413f21fb4ff5498dd45e07688a7 1030 Pfam PF01568 Molydopterin dinucleotide binding domain 898 986 3.2E-13 T 21-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 VFU_RS07180 55906413f21fb4ff5498dd45e07688a7 1030 Gene3D G3DSA:2.40.40.20 863 1030 1.3E-27 T 21-04-2016 VFU_RS07180 55906413f21fb4ff5498dd45e07688a7 1030 PANTHER PTHR11615:SF136 71 106 8.6E-135 T 21-04-2016 VFU_RS07180 55906413f21fb4ff5498dd45e07688a7 1030 PANTHER PTHR11615:SF136 126 186 8.6E-135 T 21-04-2016 VFU_RS07180 55906413f21fb4ff5498dd45e07688a7 1030 PANTHER PTHR11615:SF136 558 765 8.6E-135 T 21-04-2016 VFU_RS07180 55906413f21fb4ff5498dd45e07688a7 1030 PANTHER PTHR11615:SF136 208 371 8.6E-135 T 21-04-2016 VFU_RS07180 55906413f21fb4ff5498dd45e07688a7 1030 PANTHER PTHR11615:SF136 419 494 8.6E-135 T 21-04-2016 VFU_RS07180 55906413f21fb4ff5498dd45e07688a7 1030 PANTHER PTHR11615:SF136 802 1029 8.6E-135 T 21-04-2016 VFU_RS07180 55906413f21fb4ff5498dd45e07688a7 1030 SUPERFAMILY SSF50692 881 1007 1.67E-24 T 21-04-2016 IPR009010 Aspartate decarboxylase-like domain VFU_RS17450 38f29fabb7b791c10bed0bbc40321ada 366 SMART SM00382 40 228 8.1E-8 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS17450 38f29fabb7b791c10bed0bbc40321ada 366 Pfam PF00005 ABC transporter 31 180 1.7E-33 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS17450 38f29fabb7b791c10bed0bbc40321ada 366 Pfam PF00005 ABC transporter 282 354 3.0E-6 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS17450 38f29fabb7b791c10bed0bbc40321ada 366 PANTHER PTHR24220 17 366 6.2E-171 T 21-04-2016 VFU_RS17450 38f29fabb7b791c10bed0bbc40321ada 366 SUPERFAMILY SSF52540 16 234 1.3E-58 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS17450 38f29fabb7b791c10bed0bbc40321ada 366 SUPERFAMILY SSF52540 281 363 2.03E-12 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS17450 38f29fabb7b791c10bed0bbc40321ada 366 Gene3D G3DSA:3.40.50.300 282 363 6.8E-13 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS17450 38f29fabb7b791c10bed0bbc40321ada 366 Gene3D G3DSA:3.40.50.300 13 233 1.5E-62 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS17450 38f29fabb7b791c10bed0bbc40321ada 366 PANTHER PTHR24220:SF516 17 366 6.2E-171 T 21-04-2016 VFU_RS06275 ecc5ad62e5341d387e3aa4b06c53a9d9 169 Pfam PF10975 Protein of unknown function (DUF2802) 68 135 1.8E-22 T 21-04-2016 IPR021244 Protein of unknown function DUF2802 VFU_RS03070 41ade7229869a202e0f71a0db3b56596 263 TIGRFAM TIGR00761 argB: acetylglutamate kinase 9 234 1.7E-65 T 21-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VFU_RS03070 41ade7229869a202e0f71a0db3b56596 263 Hamap MF_00082_B Acetylglutamate kinase [argB]. 5 262 26.47 T 21-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VFU_RS03070 41ade7229869a202e0f71a0db3b56596 263 SUPERFAMILY SSF53633 6 262 5.24E-58 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VFU_RS03070 41ade7229869a202e0f71a0db3b56596 263 Pfam PF00696 Amino acid kinase family 9 238 3.0E-35 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VFU_RS03070 41ade7229869a202e0f71a0db3b56596 263 PANTHER PTHR23342 3 262 1.2E-85 T 21-04-2016 VFU_RS03070 41ade7229869a202e0f71a0db3b56596 263 PIRSF PIRSF000728 1 263 1.9E-69 T 21-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VFU_RS03070 41ade7229869a202e0f71a0db3b56596 263 Gene3D G3DSA:3.40.1160.10 7 260 5.2E-75 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VFU_RS10635 d5e83fec08f2a7226917756a60e298ac 335 PANTHER PTHR30386:SF7 5 334 1.1E-82 T 21-04-2016 VFU_RS10635 d5e83fec08f2a7226917756a60e298ac 335 SUPERFAMILY SSF111369 40 119 2.35E-11 T 21-04-2016 VFU_RS10635 d5e83fec08f2a7226917756a60e298ac 335 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 146 282 1.4E-16 T 21-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VFU_RS10635 d5e83fec08f2a7226917756a60e298ac 335 Gene3D G3DSA:2.40.50.100 203 237 5.9E-20 T 21-04-2016 VFU_RS10635 d5e83fec08f2a7226917756a60e298ac 335 Gene3D G3DSA:2.40.50.100 42 72 5.9E-20 T 21-04-2016 VFU_RS10635 d5e83fec08f2a7226917756a60e298ac 335 PANTHER PTHR30386 5 334 1.1E-82 T 21-04-2016 VFU_RS10635 d5e83fec08f2a7226917756a60e298ac 335 Pfam PF13533 Biotin-lipoyl like 39 86 1.1E-14 T 21-04-2016 VFU_RS10635 d5e83fec08f2a7226917756a60e298ac 335 SUPERFAMILY SSF111369 178 250 2.75E-8 T 21-04-2016 VFU_RS06480 975f10aa97b2177cfd2e8d7885fe9657 193 SUPERFAMILY SSF52972 1 186 9.81E-58 T 21-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like VFU_RS06480 975f10aa97b2177cfd2e8d7885fe9657 193 Hamap MF_00528 Septum formation protein Maf [maf]. 5 192 29.492 T 21-04-2016 IPR003697 Maf-like protein GO:0005737 VFU_RS06480 975f10aa97b2177cfd2e8d7885fe9657 193 Gene3D G3DSA:3.90.950.10 3 190 1.1E-55 T 21-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like VFU_RS06480 975f10aa97b2177cfd2e8d7885fe9657 193 PANTHER PTHR11746 124 188 9.7E-31 T 21-04-2016 VFU_RS06480 975f10aa97b2177cfd2e8d7885fe9657 193 PANTHER PTHR11746:SF102 124 188 9.7E-31 T 21-04-2016 VFU_RS06480 975f10aa97b2177cfd2e8d7885fe9657 193 TIGRFAM TIGR00172 maf: septum formation protein Maf 4 185 8.1E-53 T 21-04-2016 IPR003697 Maf-like protein GO:0005737 VFU_RS06480 975f10aa97b2177cfd2e8d7885fe9657 193 PIRSF PIRSF006305 1 193 9.4E-47 T 21-04-2016 IPR003697 Maf-like protein GO:0005737 VFU_RS06480 975f10aa97b2177cfd2e8d7885fe9657 193 Pfam PF02545 Maf-like protein 5 187 6.5E-46 T 21-04-2016 IPR003697 Maf-like protein GO:0005737 VFU_RS00395 aa398ce5698786173123cb59d7156283 649 PANTHER PTHR24095:SF178 6 642 0.0 T 21-04-2016 VFU_RS00395 aa398ce5698786173123cb59d7156283 649 Pfam PF00501 AMP-binding enzyme 84 522 1.5E-90 T 21-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VFU_RS00395 aa398ce5698786173123cb59d7156283 649 Gene3D G3DSA:3.40.50.980 267 424 1.1E-25 T 21-04-2016 VFU_RS00395 aa398ce5698786173123cb59d7156283 649 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 609 3.5E-25 T 21-04-2016 IPR025110 AMP-binding enzyme C-terminal domain VFU_RS00395 aa398ce5698786173123cb59d7156283 649 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 21 643 0.0 T 21-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 VFU_RS00395 aa398ce5698786173123cb59d7156283 649 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 21-04-2016 IPR020845 AMP-binding, conserved site VFU_RS00395 aa398ce5698786173123cb59d7156283 649 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 645 52.607 T 21-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 VFU_RS00395 aa398ce5698786173123cb59d7156283 649 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 1.9E-19 T 21-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 VFU_RS00395 aa398ce5698786173123cb59d7156283 649 SUPERFAMILY SSF56801 10 644 1.44E-183 T 21-04-2016 VFU_RS00395 aa398ce5698786173123cb59d7156283 649 Gene3D G3DSA:3.40.50.980 80 266 1.2E-43 T 21-04-2016 VFU_RS00395 aa398ce5698786173123cb59d7156283 649 Gene3D G3DSA:3.30.300.30 518 637 9.3E-28 T 21-04-2016 VFU_RS00395 aa398ce5698786173123cb59d7156283 649 Gene3D G3DSA:2.30.38.10 439 515 4.7E-9 T 21-04-2016 VFU_RS00395 aa398ce5698786173123cb59d7156283 649 PANTHER PTHR24095 6 642 0.0 T 21-04-2016 VFU_RS04520 0cc649e88538681e8810043f9203e50e 366 PANTHER PTHR30469:SF15 5 366 1.3E-77 T 21-04-2016 VFU_RS04520 0cc649e88538681e8810043f9203e50e 366 SUPERFAMILY SSF111369 71 285 3.66E-30 T 21-04-2016 VFU_RS04520 0cc649e88538681e8810043f9203e50e 366 Gene3D G3DSA:2.40.50.100 176 208 3.7E-14 T 21-04-2016 VFU_RS04520 0cc649e88538681e8810043f9203e50e 366 Gene3D G3DSA:2.40.50.100 82 115 3.7E-14 T 21-04-2016 VFU_RS04520 0cc649e88538681e8810043f9203e50e 366 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 69 276 1.5E-20 T 21-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VFU_RS04520 0cc649e88538681e8810043f9203e50e 366 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 63 357 3.6E-48 T 21-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 VFU_RS04520 0cc649e88538681e8810043f9203e50e 366 PANTHER PTHR30469 5 366 1.3E-77 T 21-04-2016 VFU_RS12255 76d309552b267452b85c1f9603b561e5 967 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 560 644 9.4E-35 T 21-04-2016 IPR008766 Replication gene A protein GO:0006260 VFU_RS12255 76d309552b267452b85c1f9603b561e5 967 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 209 493 1.2E-90 T 21-04-2016 IPR008766 Replication gene A protein GO:0006260 VFU_RS02350 c854807533b330df7dc99affaec092a0 199 Pfam PF03602 Conserved hypothetical protein 95 19 194 1.2E-63 T 21-04-2016 VFU_RS02350 c854807533b330df7dc99affaec092a0 199 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 131 137 - T 21-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VFU_RS02350 c854807533b330df7dc99affaec092a0 199 PANTHER PTHR18895:SF60 3 199 1.2E-51 T 21-04-2016 VFU_RS02350 c854807533b330df7dc99affaec092a0 199 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 15 196 3.4E-62 T 21-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VFU_RS02350 c854807533b330df7dc99affaec092a0 199 PIRSF PIRSF004553 18 198 6.4E-55 T 21-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VFU_RS02350 c854807533b330df7dc99affaec092a0 199 PANTHER PTHR18895 3 199 1.2E-51 T 21-04-2016 VFU_RS02350 c854807533b330df7dc99affaec092a0 199 Gene3D G3DSA:3.40.50.150 11 197 1.6E-68 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS02350 c854807533b330df7dc99affaec092a0 199 SUPERFAMILY SSF53335 18 195 5.44E-55 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS08070 e6720c6998e1c6e3a9e8429dc3041b65 280 Gene3D G3DSA:1.20.1080.10 30 279 4.0E-87 T 21-04-2016 IPR023271 Aquaporin-like VFU_RS08070 e6720c6998e1c6e3a9e8429dc3041b65 280 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 82 91 - T 21-04-2016 IPR024002 Formate/nitrite transporter, conserved site VFU_RS08070 e6720c6998e1c6e3a9e8429dc3041b65 280 PANTHER PTHR30520 1 227 1.8E-101 T 21-04-2016 VFU_RS08070 e6720c6998e1c6e3a9e8429dc3041b65 280 PANTHER PTHR30520 244 277 1.8E-101 T 21-04-2016 VFU_RS08070 e6720c6998e1c6e3a9e8429dc3041b65 280 PANTHER PTHR30520:SF4 1 227 1.8E-101 T 21-04-2016 VFU_RS08070 e6720c6998e1c6e3a9e8429dc3041b65 280 PANTHER PTHR30520:SF4 244 277 1.8E-101 T 21-04-2016 VFU_RS08070 e6720c6998e1c6e3a9e8429dc3041b65 280 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 13 278 1.6E-113 T 21-04-2016 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 VFU_RS08070 e6720c6998e1c6e3a9e8429dc3041b65 280 Pfam PF01226 Formate/nitrite transporter 13 275 1.3E-77 T 21-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 VFU_RS08070 e6720c6998e1c6e3a9e8429dc3041b65 280 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 167 177 - T 21-04-2016 IPR024002 Formate/nitrite transporter, conserved site VFU_RS08070 e6720c6998e1c6e3a9e8429dc3041b65 280 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 26 279 5.3E-81 T 21-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 VFU_RS00595 dd9d0f25868373d3c2248c3c7eebb676 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 180 5.2E-31 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS00595 dd9d0f25868373d3c2248c3c7eebb676 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 116 132 5.2E-31 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS00595 dd9d0f25868373d3c2248c3c7eebb676 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 196 216 5.2E-31 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS00595 dd9d0f25868373d3c2248c3c7eebb676 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 69 80 5.2E-31 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS00595 dd9d0f25868373d3c2248c3c7eebb676 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 161 5.2E-31 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS00595 dd9d0f25868373d3c2248c3c7eebb676 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 5.2E-31 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS00595 dd9d0f25868373d3c2248c3c7eebb676 233 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 228 5.0E-48 T 21-04-2016 VFU_RS00595 dd9d0f25868373d3c2248c3c7eebb676 233 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 69 80 4.1E-13 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS00595 dd9d0f25868373d3c2248c3c7eebb676 233 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 122 130 4.1E-13 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS00595 dd9d0f25868373d3c2248c3c7eebb676 233 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 161 4.1E-13 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS00595 dd9d0f25868373d3c2248c3c7eebb676 233 PANTHER PTHR24322 7 126 7.4E-45 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS00595 dd9d0f25868373d3c2248c3c7eebb676 233 PANTHER PTHR24322 142 174 7.4E-45 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS00595 dd9d0f25868373d3c2248c3c7eebb676 233 Gene3D G3DSA:3.40.50.720 5 230 1.9E-70 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS00595 dd9d0f25868373d3c2248c3c7eebb676 233 SUPERFAMILY SSF51735 5 230 1.49E-61 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS03480 1fcb49b54009633b970fe43754f94170 299 Pfam PF10987 Protein of unknown function (DUF2806) 58 276 2.7E-84 T 21-04-2016 IPR021254 Protein of unknown function DUF2806 VFU_RS03480 1fcb49b54009633b970fe43754f94170 299 TIGRFAM TIGR03899 TIGR03899: TIGR03899 family protein 37 286 2.5E-104 T 21-04-2016 IPR021254 Protein of unknown function DUF2806 VFU_RS03260 8aea4f9d24b5f078aab0b87ccbe26629 211 PANTHER PTHR11102 33 175 6.6E-15 T 21-04-2016 VFU_RS03260 8aea4f9d24b5f078aab0b87ccbe26629 211 Pfam PF08238 Sel1 repeat 149 171 180.0 T 21-04-2016 IPR006597 Sel1-like repeat VFU_RS03260 8aea4f9d24b5f078aab0b87ccbe26629 211 Pfam PF08238 Sel1 repeat 76 106 0.15 T 21-04-2016 IPR006597 Sel1-like repeat VFU_RS03260 8aea4f9d24b5f078aab0b87ccbe26629 211 Pfam PF08238 Sel1 repeat 108 143 7.5E-6 T 21-04-2016 IPR006597 Sel1-like repeat VFU_RS03260 8aea4f9d24b5f078aab0b87ccbe26629 211 SUPERFAMILY SSF81901 64 176 3.79E-22 T 21-04-2016 VFU_RS03260 8aea4f9d24b5f078aab0b87ccbe26629 211 Gene3D G3DSA:1.25.40.10 64 178 2.2E-19 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VFU_RS03260 8aea4f9d24b5f078aab0b87ccbe26629 211 SMART SM00671 108 143 1.0E-6 T 21-04-2016 IPR006597 Sel1-like repeat VFU_RS03260 8aea4f9d24b5f078aab0b87ccbe26629 211 SMART SM00671 144 179 31.0 T 21-04-2016 IPR006597 Sel1-like repeat VFU_RS03260 8aea4f9d24b5f078aab0b87ccbe26629 211 SMART SM00671 72 107 0.017 T 21-04-2016 IPR006597 Sel1-like repeat VFU_RS04315 f166127113a705e17c9db8b94918ade1 256 Pfam PF07729 FCD domain 99 226 9.3E-20 T 21-04-2016 IPR011711 GntR, C-terminal VFU_RS04315 f166127113a705e17c9db8b94918ade1 256 SUPERFAMILY SSF46785 5 78 1.14E-22 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS04315 f166127113a705e17c9db8b94918ade1 256 PANTHER PTHR11751:SF355 92 115 6.9E-47 T 21-04-2016 VFU_RS04315 f166127113a705e17c9db8b94918ade1 256 PANTHER PTHR11751:SF355 1 76 6.9E-47 T 21-04-2016 VFU_RS04315 f166127113a705e17c9db8b94918ade1 256 SMART SM00895 99 227 2.9E-20 T 21-04-2016 IPR011711 GntR, C-terminal VFU_RS04315 f166127113a705e17c9db8b94918ade1 256 SMART SM00345 15 74 1.1E-27 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VFU_RS04315 f166127113a705e17c9db8b94918ade1 256 SUPERFAMILY SSF48008 97 235 1.96E-21 T 21-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VFU_RS04315 f166127113a705e17c9db8b94918ade1 256 PANTHER PTHR11751 92 115 6.9E-47 T 21-04-2016 VFU_RS04315 f166127113a705e17c9db8b94918ade1 256 PANTHER PTHR11751 1 76 6.9E-47 T 21-04-2016 VFU_RS04315 f166127113a705e17c9db8b94918ade1 256 Gene3D G3DSA:1.10.10.10 7 78 6.4E-27 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS04315 f166127113a705e17c9db8b94918ade1 256 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 7.6E-25 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VFU_RS04315 f166127113a705e17c9db8b94918ade1 256 Gene3D G3DSA:1.20.120.530 98 238 2.8E-20 T 21-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VFU_RS04315 f166127113a705e17c9db8b94918ade1 256 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 1.85E-9 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VFU_RS04315 f166127113a705e17c9db8b94918ade1 256 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 1.85E-9 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VFU_RS02595 32871e839db4c10812cabc842c2ec156 193 PRINTS PR00885 Bacterial general secretion pathway protein H signature 2 16 3.5E-21 T 21-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VFU_RS02595 32871e839db4c10812cabc842c2ec156 193 PRINTS PR00885 Bacterial general secretion pathway protein H signature 143 158 3.5E-21 T 21-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VFU_RS02595 32871e839db4c10812cabc842c2ec156 193 PRINTS PR00885 Bacterial general secretion pathway protein H signature 17 31 3.5E-21 T 21-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VFU_RS02595 32871e839db4c10812cabc842c2ec156 193 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 4 183 2.5E-13 T 21-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VFU_RS02595 32871e839db4c10812cabc842c2ec156 193 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 4.6E-6 T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site VFU_RS02595 32871e839db4c10812cabc842c2ec156 193 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site VFU_RS02595 32871e839db4c10812cabc842c2ec156 193 Pfam PF12019 Type II transport protein GspH 42 179 2.8E-10 T 21-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 VFU_RS02595 32871e839db4c10812cabc842c2ec156 193 Gene3D G3DSA:3.55.40.10 37 190 1.9E-44 T 21-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 VFU_RS02595 32871e839db4c10812cabc842c2ec156 193 SUPERFAMILY SSF54523 7 91 2.59E-6 T 21-04-2016 VFU_RS05935 6fd0caf0e44c9c57b93a08fd4dc99911 350 SUPERFAMILY SSF48029 24 134 5.36E-20 T 21-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical VFU_RS05935 6fd0caf0e44c9c57b93a08fd4dc99911 350 PANTHER PTHR30534 10 350 4.5E-108 T 21-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VFU_RS05935 6fd0caf0e44c9c57b93a08fd4dc99911 350 SUPERFAMILY SSF48029 132 343 2.88E-66 T 21-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical VFU_RS05935 6fd0caf0e44c9c57b93a08fd4dc99911 350 Gene3D G3DSA:1.10.220.30 27 92 7.0E-15 T 21-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical VFU_RS05935 6fd0caf0e44c9c57b93a08fd4dc99911 350 Gene3D G3DSA:1.10.220.30 123 207 3.0E-31 T 21-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical VFU_RS05935 6fd0caf0e44c9c57b93a08fd4dc99911 350 PIRSF PIRSF003161 18 350 1.8E-111 T 21-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VFU_RS05935 6fd0caf0e44c9c57b93a08fd4dc99911 350 Pfam PF14842 FliG N-terminal domain 23 123 2.9E-27 T 21-04-2016 IPR028263 Flagellar motor switch protein FliG, N-terminal domain VFU_RS05935 6fd0caf0e44c9c57b93a08fd4dc99911 350 PANTHER PTHR30534:SF0 10 350 4.5E-108 T 21-04-2016 VFU_RS05935 6fd0caf0e44c9c57b93a08fd4dc99911 350 Pfam PF14841 FliG middle domain 133 205 1.4E-25 T 21-04-2016 IPR032779 Flagellar motor switch protein FliG, middle domain VFU_RS05935 6fd0caf0e44c9c57b93a08fd4dc99911 350 PRINTS PR00954 Flagellar motor switch protein FliG signature 23 39 5.5E-57 T 21-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VFU_RS05935 6fd0caf0e44c9c57b93a08fd4dc99911 350 PRINTS PR00954 Flagellar motor switch protein FliG signature 52 78 5.5E-57 T 21-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VFU_RS05935 6fd0caf0e44c9c57b93a08fd4dc99911 350 PRINTS PR00954 Flagellar motor switch protein FliG signature 244 264 5.5E-57 T 21-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VFU_RS05935 6fd0caf0e44c9c57b93a08fd4dc99911 350 PRINTS PR00954 Flagellar motor switch protein FliG signature 290 316 5.5E-57 T 21-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VFU_RS05935 6fd0caf0e44c9c57b93a08fd4dc99911 350 PRINTS PR00954 Flagellar motor switch protein FliG signature 132 155 5.5E-57 T 21-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VFU_RS05935 6fd0caf0e44c9c57b93a08fd4dc99911 350 PRINTS PR00954 Flagellar motor switch protein FliG signature 266 286 5.5E-57 T 21-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VFU_RS05935 6fd0caf0e44c9c57b93a08fd4dc99911 350 PRINTS PR00954 Flagellar motor switch protein FliG signature 213 238 5.5E-57 T 21-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VFU_RS05935 6fd0caf0e44c9c57b93a08fd4dc99911 350 Pfam PF01706 FliG C-terminal domain 236 342 7.8E-40 T 21-04-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal VFU_RS05935 6fd0caf0e44c9c57b93a08fd4dc99911 350 Gene3D G3DSA:1.10.220.30 213 348 4.4E-40 T 21-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical VFU_RS05935 6fd0caf0e44c9c57b93a08fd4dc99911 350 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 19 348 1.2E-93 T 21-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VFU_RS09230 a30867d6d219cbe9c87d823c50c6ba1f 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 120 136 5.4E-86 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VFU_RS09230 a30867d6d219cbe9c87d823c50c6ba1f 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 89 102 5.4E-86 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VFU_RS09230 a30867d6d219cbe9c87d823c50c6ba1f 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 201 220 5.4E-86 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VFU_RS09230 a30867d6d219cbe9c87d823c50c6ba1f 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 73 87 5.4E-86 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VFU_RS09230 a30867d6d219cbe9c87d823c50c6ba1f 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 164 183 5.4E-86 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VFU_RS09230 a30867d6d219cbe9c87d823c50c6ba1f 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 290 316 5.4E-86 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VFU_RS09230 a30867d6d219cbe9c87d823c50c6ba1f 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 146 160 5.4E-86 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VFU_RS09230 a30867d6d219cbe9c87d823c50c6ba1f 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 30 46 5.4E-86 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VFU_RS09230 a30867d6d219cbe9c87d823c50c6ba1f 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 245 264 5.4E-86 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VFU_RS09230 a30867d6d219cbe9c87d823c50c6ba1f 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 46 67 5.4E-86 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VFU_RS09230 a30867d6d219cbe9c87d823c50c6ba1f 346 PIRSF PIRSF019574 1 345 2.0E-123 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VFU_RS09230 a30867d6d219cbe9c87d823c50c6ba1f 346 Pfam PF13416 Bacterial extracellular solute-binding protein 40 311 5.1E-44 T 21-04-2016 VFU_RS09230 a30867d6d219cbe9c87d823c50c6ba1f 346 PANTHER PTHR30222:SF10 9 342 9.2E-173 T 21-04-2016 VFU_RS09230 a30867d6d219cbe9c87d823c50c6ba1f 346 SUPERFAMILY SSF53850 24 342 6.14E-95 T 21-04-2016 VFU_RS09230 a30867d6d219cbe9c87d823c50c6ba1f 346 PANTHER PTHR30222 9 342 9.2E-173 T 21-04-2016 VFU_RS09230 a30867d6d219cbe9c87d823c50c6ba1f 346 Gene3D G3DSA:3.40.190.10 131 267 7.6E-25 T 21-04-2016 VFU_RS09230 a30867d6d219cbe9c87d823c50c6ba1f 346 Gene3D G3DSA:3.40.190.10 23 129 6.7E-64 T 21-04-2016 VFU_RS09230 a30867d6d219cbe9c87d823c50c6ba1f 346 Gene3D G3DSA:3.40.190.10 268 311 6.7E-64 T 21-04-2016 VFU_RS11450 bcb67744ae779a97f18b9462efbe1009 243 Gene3D G3DSA:3.60.21.10 173 203 5.9E-17 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like VFU_RS11450 bcb67744ae779a97f18b9462efbe1009 243 Gene3D G3DSA:3.60.21.10 1 125 5.9E-17 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like VFU_RS11450 bcb67744ae779a97f18b9462efbe1009 243 SUPERFAMILY SSF56300 1 222 1.36E-30 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like VFU_RS11450 bcb67744ae779a97f18b9462efbe1009 243 PANTHER PTHR34990 1 240 6.7E-115 T 21-04-2016 VFU_RS11450 bcb67744ae779a97f18b9462efbe1009 243 PANTHER PTHR34990:SF1 1 240 6.7E-115 T 21-04-2016 VFU_RS11450 bcb67744ae779a97f18b9462efbe1009 243 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 240 119.829 T 21-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 VFU_RS11450 bcb67744ae779a97f18b9462efbe1009 243 Pfam PF00149 Calcineurin-like phosphoesterase 1 199 8.4E-10 T 21-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 VFU_RS11450 bcb67744ae779a97f18b9462efbe1009 243 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 231 4.6E-109 T 21-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 VFU_RS02695 65fc85a7f9c12f5f3c80dbffd5db6668 201 SUPERFAMILY SSF51569 2 200 2.01E-67 T 21-04-2016 VFU_RS02695 65fc85a7f9c12f5f3c80dbffd5db6668 201 Pfam PF01081 KDPG and KHG aldolase 4 197 4.4E-74 T 21-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VFU_RS02695 65fc85a7f9c12f5f3c80dbffd5db6668 201 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 123 136 - T 21-04-2016 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VFU_RS02695 65fc85a7f9c12f5f3c80dbffd5db6668 201 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 35 44 - T 21-04-2016 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562|UniPathway: UPA00227|UniPathway: UPA00856 VFU_RS02695 65fc85a7f9c12f5f3c80dbffd5db6668 201 PANTHER PTHR30246 1 201 1.9E-133 T 21-04-2016 VFU_RS02695 65fc85a7f9c12f5f3c80dbffd5db6668 201 PANTHER PTHR30246:SF5 1 201 1.9E-133 T 21-04-2016 VFU_RS02695 65fc85a7f9c12f5f3c80dbffd5db6668 201 Gene3D G3DSA:3.20.20.70 2 200 2.2E-76 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS02695 65fc85a7f9c12f5f3c80dbffd5db6668 201 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 4 200 4.4E-84 T 21-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VFU_RS08340 7c0751e0aa90466b6eb7c82ec1882985 559 SMART SM01274 75 255 1.3E-103 T 21-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VFU_RS08340 7c0751e0aa90466b6eb7c82ec1882985 559 Pfam PF03949 Malic enzyme, NAD binding domain 265 525 4.6E-98 T 21-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 VFU_RS08340 7c0751e0aa90466b6eb7c82ec1882985 559 SMART SM00919 265 525 1.6E-121 T 21-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 VFU_RS08340 7c0751e0aa90466b6eb7c82ec1882985 559 PIRSF PIRSF000106 2 557 4.9E-220 T 21-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 VFU_RS08340 7c0751e0aa90466b6eb7c82ec1882985 559 Gene3D G3DSA:3.40.50.10380 10 262 2.0E-115 T 21-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VFU_RS08340 7c0751e0aa90466b6eb7c82ec1882985 559 PRINTS PR00072 Malic enzyme signature 292 308 1.1E-74 T 21-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 VFU_RS08340 7c0751e0aa90466b6eb7c82ec1882985 559 PRINTS PR00072 Malic enzyme signature 236 254 1.1E-74 T 21-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 VFU_RS08340 7c0751e0aa90466b6eb7c82ec1882985 559 PRINTS PR00072 Malic enzyme signature 141 170 1.1E-74 T 21-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 VFU_RS08340 7c0751e0aa90466b6eb7c82ec1882985 559 PRINTS PR00072 Malic enzyme signature 261 277 1.1E-74 T 21-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 VFU_RS08340 7c0751e0aa90466b6eb7c82ec1882985 559 PRINTS PR00072 Malic enzyme signature 81 105 1.1E-74 T 21-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 VFU_RS08340 7c0751e0aa90466b6eb7c82ec1882985 559 PRINTS PR00072 Malic enzyme signature 403 419 1.1E-74 T 21-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 VFU_RS08340 7c0751e0aa90466b6eb7c82ec1882985 559 PRINTS PR00072 Malic enzyme signature 177 199 1.1E-74 T 21-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 VFU_RS08340 7c0751e0aa90466b6eb7c82ec1882985 559 Gene3D G3DSA:3.40.50.720 263 557 2.9E-102 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS08340 7c0751e0aa90466b6eb7c82ec1882985 559 PANTHER PTHR23406 5 556 0.0 T 21-04-2016 VFU_RS08340 7c0751e0aa90466b6eb7c82ec1882985 559 PANTHER PTHR23406:SF25 5 556 0.0 T 21-04-2016 VFU_RS08340 7c0751e0aa90466b6eb7c82ec1882985 559 ProSitePatterns PS00331 Malic enzymes signature. 261 277 - T 21-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 VFU_RS08340 7c0751e0aa90466b6eb7c82ec1882985 559 Pfam PF00390 Malic enzyme, N-terminal domain 75 254 9.9E-78 T 21-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VFU_RS08340 7c0751e0aa90466b6eb7c82ec1882985 559 SUPERFAMILY SSF53223 6 264 1.15E-107 T 21-04-2016 VFU_RS08340 7c0751e0aa90466b6eb7c82ec1882985 559 SUPERFAMILY SSF51735 265 556 2.23E-88 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS00250 637f9db32bd6c9c321fa326b0d80eebc 126 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 72 122 2.1E-20 T 21-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 VFU_RS00250 637f9db32bd6c9c321fa326b0d80eebc 126 Gene3D G3DSA:1.20.5.1030 65 122 1.1E-23 T 21-04-2016 VFU_RS00250 637f9db32bd6c9c321fa326b0d80eebc 126 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 72 122 5.6E-17 T 21-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 VFU_RS00250 637f9db32bd6c9c321fa326b0d80eebc 126 PRINTS PR01650 Bacterial translocase SecE signature 90 110 3.58E-41 T 21-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 VFU_RS00250 637f9db32bd6c9c321fa326b0d80eebc 126 PRINTS PR01650 Bacterial translocase SecE signature 45 66 3.58E-41 T 21-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 VFU_RS00250 637f9db32bd6c9c321fa326b0d80eebc 126 PRINTS PR01650 Bacterial translocase SecE signature 66 86 3.58E-41 T 21-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 VFU_RS00250 637f9db32bd6c9c321fa326b0d80eebc 126 PRINTS PR01650 Bacterial translocase SecE signature 110 126 3.58E-41 T 21-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 VFU_RS00250 637f9db32bd6c9c321fa326b0d80eebc 126 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 72 100 - T 21-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 VFU_RS00250 637f9db32bd6c9c321fa326b0d80eebc 126 Hamap MF_00422 Protein translocase subunit SecE [secE]. 68 122 13.395 T 21-04-2016 IPR022943 Preprotein translocase subunit SecE VFU_RS00250 637f9db32bd6c9c321fa326b0d80eebc 126 PANTHER PTHR33910:SF1 2 126 3.1E-29 T 21-04-2016 VFU_RS00250 637f9db32bd6c9c321fa326b0d80eebc 126 PANTHER PTHR33910 2 126 3.1E-29 T 21-04-2016 VFU_RS14390 b41111d1a37b703d19eb4916adc365c9 424 Gene3D G3DSA:3.30.465.10 319 418 1.1E-22 T 21-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 VFU_RS14390 b41111d1a37b703d19eb4916adc365c9 424 Pfam PF01595 Domain of unknown function DUF21 13 181 6.7E-50 T 21-04-2016 IPR002550 Domain of unknown function DUF21 VFU_RS14390 b41111d1a37b703d19eb4916adc365c9 424 PANTHER PTHR22777:SF3 2 418 8.8E-156 T 21-04-2016 VFU_RS14390 b41111d1a37b703d19eb4916adc365c9 424 Pfam PF00571 CBS domain 278 326 1.7E-5 T 21-04-2016 IPR000644 CBS domain VFU_RS14390 b41111d1a37b703d19eb4916adc365c9 424 SUPERFAMILY SSF56176 339 421 2.4E-20 T 21-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 VFU_RS14390 b41111d1a37b703d19eb4916adc365c9 424 PANTHER PTHR22777 2 418 8.8E-156 T 21-04-2016 VFU_RS14390 b41111d1a37b703d19eb4916adc365c9 424 Gene3D G3DSA:3.10.580.10 192 318 1.5E-13 T 21-04-2016 VFU_RS14390 b41111d1a37b703d19eb4916adc365c9 424 SMART SM01091 342 420 2.4E-23 T 21-04-2016 IPR005170 Transporter-associated domain VFU_RS14390 b41111d1a37b703d19eb4916adc365c9 424 Pfam PF03471 Transporter associated domain 344 419 1.2E-16 T 21-04-2016 IPR005170 Transporter-associated domain VFU_RS14390 b41111d1a37b703d19eb4916adc365c9 424 SUPERFAMILY SSF54631 192 329 3.79E-25 T 21-04-2016 VFU_RS02230 9d1fe0dffb1742e661fffa6c033e8c6e 417 PANTHER PTHR11482 3 416 2.6E-178 T 21-04-2016 VFU_RS02230 9d1fe0dffb1742e661fffa6c033e8c6e 417 SUPERFAMILY SSF50621 259 414 5.44E-52 T 21-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 VFU_RS02230 9d1fe0dffb1742e661fffa6c033e8c6e 417 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 5 412 9.9E-168 T 21-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VFU_RS02230 9d1fe0dffb1742e661fffa6c033e8c6e 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 165 174 1.6E-28 T 21-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VFU_RS02230 9d1fe0dffb1742e661fffa6c033e8c6e 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 380 402 1.6E-28 T 21-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VFU_RS02230 9d1fe0dffb1742e661fffa6c033e8c6e 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 76 93 1.6E-28 T 21-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VFU_RS02230 9d1fe0dffb1742e661fffa6c033e8c6e 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 300 318 1.6E-28 T 21-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VFU_RS02230 9d1fe0dffb1742e661fffa6c033e8c6e 417 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 287 390 1.6E-17 T 21-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 VFU_RS02230 9d1fe0dffb1742e661fffa6c033e8c6e 417 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 58 76 - T 21-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 VFU_RS02230 9d1fe0dffb1742e661fffa6c033e8c6e 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 58 76 1.3E-26 T 21-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 VFU_RS02230 9d1fe0dffb1742e661fffa6c033e8c6e 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 370 383 1.3E-26 T 21-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 VFU_RS02230 9d1fe0dffb1742e661fffa6c033e8c6e 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 272 291 1.3E-26 T 21-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 VFU_RS02230 9d1fe0dffb1742e661fffa6c033e8c6e 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 78 90 1.3E-26 T 21-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 VFU_RS02230 9d1fe0dffb1742e661fffa6c033e8c6e 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 191 204 1.3E-26 T 21-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 VFU_RS02230 9d1fe0dffb1742e661fffa6c033e8c6e 417 Gene3D G3DSA:2.40.37.10 269 414 2.5E-48 T 21-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 VFU_RS02230 9d1fe0dffb1742e661fffa6c033e8c6e 417 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 36 283 6.2E-74 T 21-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 VFU_RS02230 9d1fe0dffb1742e661fffa6c033e8c6e 417 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 16 413 40.811 T 21-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VFU_RS02230 9d1fe0dffb1742e661fffa6c033e8c6e 417 PANTHER PTHR11482:SF5 3 416 2.6E-178 T 21-04-2016 VFU_RS02230 9d1fe0dffb1742e661fffa6c033e8c6e 417 Gene3D G3DSA:3.20.20.10 37 268 2.0E-81 T 21-04-2016 IPR029066 PLP-binding barrel VFU_RS02230 9d1fe0dffb1742e661fffa6c033e8c6e 417 SUPERFAMILY SSF51419 27 284 1.18E-80 T 21-04-2016 IPR029066 PLP-binding barrel VFU_RS02575 70c9de9e5a452fca114d7634959d054f 675 PRINTS PR01032 Gene IV protein signature 593 615 1.4E-11 T 21-04-2016 VFU_RS02575 70c9de9e5a452fca114d7634959d054f 675 PRINTS PR01032 Gene IV protein signature 540 568 1.4E-11 T 21-04-2016 VFU_RS02575 70c9de9e5a452fca114d7634959d054f 675 PRINTS PR01032 Gene IV protein signature 472 495 1.4E-11 T 21-04-2016 VFU_RS02575 70c9de9e5a452fca114d7634959d054f 675 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 30 622 2.2E-161 T 21-04-2016 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 VFU_RS02575 70c9de9e5a452fca114d7634959d054f 675 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 558 591 - T 21-04-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 VFU_RS02575 70c9de9e5a452fca114d7634959d054f 675 PANTHER PTHR30332:SF3 17 640 1.5E-292 T 21-04-2016 VFU_RS02575 70c9de9e5a452fca114d7634959d054f 675 Pfam PF03958 Bacterial type II/III secretion system short domain 192 259 5.4E-16 T 21-04-2016 IPR005644 NolW-like VFU_RS02575 70c9de9e5a452fca114d7634959d054f 675 Pfam PF03958 Bacterial type II/III secretion system short domain 126 188 2.2E-8 T 21-04-2016 IPR005644 NolW-like VFU_RS02575 70c9de9e5a452fca114d7634959d054f 675 Pfam PF03958 Bacterial type II/III secretion system short domain 267 346 3.7E-17 T 21-04-2016 IPR005644 NolW-like VFU_RS02575 70c9de9e5a452fca114d7634959d054f 675 PANTHER PTHR30332 17 640 1.5E-292 T 21-04-2016 VFU_RS02575 70c9de9e5a452fca114d7634959d054f 675 PRINTS PR00811 Bacterial general secretion pathway protein D signature 577 595 9.8E-37 T 21-04-2016 IPR001775 GspD/PilQ family VFU_RS02575 70c9de9e5a452fca114d7634959d054f 675 PRINTS PR00811 Bacterial general secretion pathway protein D signature 447 471 9.8E-37 T 21-04-2016 IPR001775 GspD/PilQ family VFU_RS02575 70c9de9e5a452fca114d7634959d054f 675 PRINTS PR00811 Bacterial general secretion pathway protein D signature 600 614 9.8E-37 T 21-04-2016 IPR001775 GspD/PilQ family VFU_RS02575 70c9de9e5a452fca114d7634959d054f 675 PRINTS PR00811 Bacterial general secretion pathway protein D signature 346 356 9.8E-37 T 21-04-2016 IPR001775 GspD/PilQ family VFU_RS02575 70c9de9e5a452fca114d7634959d054f 675 PRINTS PR00811 Bacterial general secretion pathway protein D signature 482 492 9.8E-37 T 21-04-2016 IPR001775 GspD/PilQ family VFU_RS02575 70c9de9e5a452fca114d7634959d054f 675 Pfam PF00263 Bacterial type II and III secretion system protein 451 613 5.9E-51 T 21-04-2016 IPR004846 Type II/III secretion system GO:0009306 VFU_RS14705 7874b296e5bee09cdfb28557e34fcb06 451 Gene3D G3DSA:1.25.60.10 3 125 8.4E-18 T 21-04-2016 VFU_RS14705 7874b296e5bee09cdfb28557e34fcb06 451 TIGRFAM TIGR00400 mgtE: magnesium transporter 5 445 1.2E-107 T 21-04-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 VFU_RS14705 7874b296e5bee09cdfb28557e34fcb06 451 Pfam PF03448 MgtE intracellular N domain 32 130 3.3E-17 T 21-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain VFU_RS14705 7874b296e5bee09cdfb28557e34fcb06 451 SMART SM00116 140 193 2.2 T 21-04-2016 IPR000644 CBS domain VFU_RS14705 7874b296e5bee09cdfb28557e34fcb06 451 SMART SM00116 204 252 0.017 T 21-04-2016 IPR000644 CBS domain VFU_RS14705 7874b296e5bee09cdfb28557e34fcb06 451 Gene3D G3DSA:1.10.357.20 275 445 6.4E-54 T 21-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 VFU_RS14705 7874b296e5bee09cdfb28557e34fcb06 451 SUPERFAMILY SSF161093 279 445 2.22E-48 T 21-04-2016 VFU_RS14705 7874b296e5bee09cdfb28557e34fcb06 451 SUPERFAMILY SSF158791 2 129 6.54E-21 T 21-04-2016 VFU_RS14705 7874b296e5bee09cdfb28557e34fcb06 451 Pfam PF01769 Divalent cation transporter 318 439 4.9E-27 T 21-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 VFU_RS14705 7874b296e5bee09cdfb28557e34fcb06 451 Pfam PF00571 CBS domain 200 249 0.0015 T 21-04-2016 IPR000644 CBS domain VFU_RS14705 7874b296e5bee09cdfb28557e34fcb06 451 Pfam PF00571 CBS domain 133 191 1.1E-7 T 21-04-2016 IPR000644 CBS domain VFU_RS14705 7874b296e5bee09cdfb28557e34fcb06 451 SUPERFAMILY SSF54631 132 260 7.83E-27 T 21-04-2016 VFU_RS14705 7874b296e5bee09cdfb28557e34fcb06 451 SMART SM00924 24 133 5.5E-17 T 21-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain VFU_RS14705 7874b296e5bee09cdfb28557e34fcb06 451 PANTHER PTHR41394 3 446 1.2E-34 T 21-04-2016 VFU_RS14705 7874b296e5bee09cdfb28557e34fcb06 451 Gene3D G3DSA:3.10.580.10 126 257 6.5E-20 T 21-04-2016 VFU_RS14000 e967643aec6d5250ce989bc05b48254f 273 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 200 216 - T 21-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VFU_RS14000 e967643aec6d5250ce989bc05b48254f 273 PANTHER PTHR10060 9 267 1.5E-79 T 21-04-2016 IPR001130 TatD family GO:0016788 VFU_RS14000 e967643aec6d5250ce989bc05b48254f 273 Pfam PF01026 TatD related DNase 13 264 2.7E-61 T 21-04-2016 IPR001130 TatD family GO:0016788 VFU_RS14000 e967643aec6d5250ce989bc05b48254f 273 SUPERFAMILY SSF51556 12 265 2.33E-69 T 21-04-2016 IPR032466 Metal-dependent hydrolase VFU_RS14000 e967643aec6d5250ce989bc05b48254f 273 PIRSF PIRSF005902 1 268 1.1E-62 T 21-04-2016 IPR001130 TatD family GO:0016788 VFU_RS14000 e967643aec6d5250ce989bc05b48254f 273 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 12 20 - T 21-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VFU_RS14000 e967643aec6d5250ce989bc05b48254f 273 Gene3D G3DSA:3.20.20.140 7 265 1.0E-73 T 21-04-2016 VFU_RS08990 707292271641cd8153d8ed110531606d 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 275 1.3E-13 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS08990 707292271641cd8153d8ed110531606d 280 Gene3D G3DSA:1.10.3720.10 5 269 1.2E-42 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS08990 707292271641cd8153d8ed110531606d 280 PANTHER PTHR32243:SF31 1 278 6.8E-116 T 21-04-2016 IPR030165 sn-glycerol-3-phosphate transport system permease protein UgpE GO:0001407|GO:0005887|GO:0015794|GO:0055052 VFU_RS08990 707292271641cd8153d8ed110531606d 280 SUPERFAMILY SSF161098 8 277 8.5E-51 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS08990 707292271641cd8153d8ed110531606d 280 PANTHER PTHR32243 1 278 6.8E-116 T 21-04-2016 VFU_RS01220 5e331c9018123778b3c55a5ea94f392c 140 PANTHER PTHR33164:SF16 6 135 2.4E-21 T 21-04-2016 VFU_RS01220 5e331c9018123778b3c55a5ea94f392c 140 PANTHER PTHR33164 6 135 2.4E-21 T 21-04-2016 VFU_RS01220 5e331c9018123778b3c55a5ea94f392c 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 4.6E-16 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VFU_RS01220 5e331c9018123778b3c55a5ea94f392c 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 4.6E-16 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VFU_RS01220 5e331c9018123778b3c55a5ea94f392c 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 4.6E-16 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VFU_RS01220 5e331c9018123778b3c55a5ea94f392c 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 4.6E-16 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VFU_RS01220 5e331c9018123778b3c55a5ea94f392c 140 SUPERFAMILY SSF46785 5 136 8.54E-31 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS01220 5e331c9018123778b3c55a5ea94f392c 140 Gene3D G3DSA:1.10.10.10 3 137 7.8E-34 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS01220 5e331c9018123778b3c55a5ea94f392c 140 SMART SM00347 23 124 1.0E-15 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VFU_RS01220 5e331c9018123778b3c55a5ea94f392c 140 Pfam PF01047 MarR family 38 88 1.5E-10 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VFU_RS14240 7e780fc9fee7c6bb1119211419fa9999 439 Pfam PF08245 Mur ligase middle domain 113 281 1.1E-29 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VFU_RS14240 7e780fc9fee7c6bb1119211419fa9999 439 PANTHER PTHR23135 1 439 6.7E-151 T 21-04-2016 VFU_RS14240 7e780fc9fee7c6bb1119211419fa9999 439 SUPERFAMILY SSF53623 98 299 2.75E-52 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VFU_RS14240 7e780fc9fee7c6bb1119211419fa9999 439 PANTHER PTHR23135:SF2 1 439 6.7E-151 T 21-04-2016 VFU_RS14240 7e780fc9fee7c6bb1119211419fa9999 439 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 9 436 7.2E-138 T 21-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VFU_RS14240 7e780fc9fee7c6bb1119211419fa9999 439 SUPERFAMILY SSF51984 8 97 4.45E-17 T 21-04-2016 VFU_RS14240 7e780fc9fee7c6bb1119211419fa9999 439 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 8 438 33.201 T 21-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VFU_RS14240 7e780fc9fee7c6bb1119211419fa9999 439 Gene3D G3DSA:3.40.50.720 8 96 1.8E-19 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS14240 7e780fc9fee7c6bb1119211419fa9999 439 Gene3D G3DSA:3.40.1190.10 97 301 1.1E-61 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VFU_RS14240 7e780fc9fee7c6bb1119211419fa9999 439 SUPERFAMILY SSF53244 301 437 5.49E-43 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VFU_RS14240 7e780fc9fee7c6bb1119211419fa9999 439 Pfam PF02875 Mur ligase family, glutamate ligase domain 304 354 1.2E-5 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VFU_RS14240 7e780fc9fee7c6bb1119211419fa9999 439 Gene3D G3DSA:3.90.190.20 303 434 1.0E-40 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VFU_RS07550 0ecea657c5814df2b9b54641aa219c2d 413 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 2.3E-7 T 21-04-2016 VFU_RS07550 0ecea657c5814df2b9b54641aa219c2d 413 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 2.3E-7 T 21-04-2016 VFU_RS07550 0ecea657c5814df2b9b54641aa219c2d 413 Pfam PF01494 FAD binding domain 7 166 2.0E-18 T 21-04-2016 IPR002938 FAD-binding domain GO:0071949 VFU_RS07550 0ecea657c5814df2b9b54641aa219c2d 413 PANTHER PTHR10617:SF113 7 411 1.3E-126 T 21-04-2016 VFU_RS07550 0ecea657c5814df2b9b54641aa219c2d 413 Gene3D G3DSA:3.50.50.60 5 180 7.6E-34 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS07550 0ecea657c5814df2b9b54641aa219c2d 413 Gene3D G3DSA:3.50.50.60 281 323 7.6E-34 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS07550 0ecea657c5814df2b9b54641aa219c2d 413 PANTHER PTHR10617 7 411 1.3E-126 T 21-04-2016 VFU_RS07550 0ecea657c5814df2b9b54641aa219c2d 413 SUPERFAMILY SSF51905 5 175 2.98E-45 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS07550 0ecea657c5814df2b9b54641aa219c2d 413 SUPERFAMILY SSF51905 285 359 2.98E-45 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS14665 7973a6a502b4edcfe42fd46a618b1c14 60 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 29 49 - T 21-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 VFU_RS08005 676ee7b11e198053284b4658a48bfeb5 321 Gene3D G3DSA:3.30.470.20 230 288 2.6E-6 T 21-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VFU_RS08005 676ee7b11e198053284b4658a48bfeb5 321 SUPERFAMILY SSF56059 49 205 6.76E-21 T 21-04-2016 VFU_RS08005 676ee7b11e198053284b4658a48bfeb5 321 SUPERFAMILY SSF56059 235 283 6.76E-21 T 21-04-2016 VFU_RS08005 676ee7b11e198053284b4658a48bfeb5 321 Gene3D G3DSA:3.30.1490.20 71 102 3.5E-4 T 21-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VFU_RS08005 676ee7b11e198053284b4658a48bfeb5 321 Gene3D G3DSA:3.30.470.20 165 206 3.0E-4 T 21-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VFU_RS08005 676ee7b11e198053284b4658a48bfeb5 321 Pfam PF14397 Sugar-transfer associated ATP-grasp 24 297 1.4E-115 T 21-04-2016 VFU_RS08005 676ee7b11e198053284b4658a48bfeb5 321 TIGRFAM TIGR02291 rimK_rel_E_lig: alpha-L-glutamate ligase homolog 8 320 3.0E-168 T 21-04-2016 IPR011758 Alpha-L-glutamate ligase-related protein VFU_RS04945 3b0e0acf642c1c17ebf6c57402664666 857 SMART SM00382 597 768 2.1E-9 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS04945 3b0e0acf642c1c17ebf6c57402664666 857 SMART SM00382 198 343 9.6E-13 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS04945 3b0e0acf642c1c17ebf6c57402664666 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 854 0.0 T 21-04-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 VFU_RS04945 3b0e0acf642c1c17ebf6c57402664666 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 21-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 VFU_RS04945 3b0e0acf642c1c17ebf6c57402664666 857 PANTHER PTHR11638 1 854 0.0 T 21-04-2016 VFU_RS04945 3b0e0acf642c1c17ebf6c57402664666 857 Gene3D G3DSA:3.40.50.300 550 777 1.3E-58 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS04945 3b0e0acf642c1c17ebf6c57402664666 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 4.3E-42 T 21-04-2016 IPR001270 ClpA/B family GO:0005524 VFU_RS04945 3b0e0acf642c1c17ebf6c57402664666 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 4.3E-42 T 21-04-2016 IPR001270 ClpA/B family GO:0005524 VFU_RS04945 3b0e0acf642c1c17ebf6c57402664666 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 4.3E-42 T 21-04-2016 IPR001270 ClpA/B family GO:0005524 VFU_RS04945 3b0e0acf642c1c17ebf6c57402664666 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 4.3E-42 T 21-04-2016 IPR001270 ClpA/B family GO:0005524 VFU_RS04945 3b0e0acf642c1c17ebf6c57402664666 857 SMART SM01086 766 855 4.1E-38 T 21-04-2016 IPR019489 Clp ATPase, C-terminal VFU_RS04945 3b0e0acf642c1c17ebf6c57402664666 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 335 2.0E-13 T 21-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VFU_RS04945 3b0e0acf642c1c17ebf6c57402664666 857 Gene3D G3DSA:1.10.8.60 343 428 8.5E-37 T 21-04-2016 VFU_RS04945 3b0e0acf642c1c17ebf6c57402664666 857 PANTHER PTHR11638:SF18 1 854 0.0 T 21-04-2016 VFU_RS04945 3b0e0acf642c1c17ebf6c57402664666 857 SUPERFAMILY SSF52540 546 851 1.23E-83 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS04945 3b0e0acf642c1c17ebf6c57402664666 857 SUPERFAMILY SSF52540 159 545 1.62E-100 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS04945 3b0e0acf642c1c17ebf6c57402664666 857 Gene3D G3DSA:3.40.50.300 160 342 5.2E-51 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS04945 3b0e0acf642c1c17ebf6c57402664666 857 Gene3D G3DSA:1.10.8.60 778 855 1.3E-31 T 21-04-2016 VFU_RS04945 3b0e0acf642c1c17ebf6c57402664666 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 845 3.7E-27 T 21-04-2016 IPR019489 Clp ATPase, C-terminal VFU_RS04945 3b0e0acf642c1c17ebf6c57402664666 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 21-04-2016 IPR028299 ClpA/B, conserved site 2 VFU_RS04945 3b0e0acf642c1c17ebf6c57402664666 857 SUPERFAMILY SSF81923 4 156 4.22E-41 T 21-04-2016 IPR004176 Clp, N-terminal GO:0019538 VFU_RS04945 3b0e0acf642c1c17ebf6c57402664666 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 759 1.7E-57 T 21-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VFU_RS04945 3b0e0acf642c1c17ebf6c57402664666 857 Gene3D G3DSA:1.10.1780.10 1 148 3.5E-45 T 21-04-2016 IPR004176 Clp, N-terminal GO:0019538 VFU_RS04945 3b0e0acf642c1c17ebf6c57402664666 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 2.3E-13 T 21-04-2016 IPR004176 Clp, N-terminal GO:0019538 VFU_RS04945 3b0e0acf642c1c17ebf6c57402664666 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 3.3E-12 T 21-04-2016 IPR004176 Clp, N-terminal GO:0019538 VFU_RS09250 77ddbc6d25d5d7585a995a28fabd8cf0 378 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 48 372 1.3E-155 T 21-04-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 VFU_RS09250 77ddbc6d25d5d7585a995a28fabd8cf0 378 PANTHER PTHR24220 19 318 1.9E-158 T 21-04-2016 VFU_RS09250 77ddbc6d25d5d7585a995a28fabd8cf0 378 PANTHER PTHR24220:SF150 19 318 1.9E-158 T 21-04-2016 VFU_RS09250 77ddbc6d25d5d7585a995a28fabd8cf0 378 Gene3D G3DSA:3.40.50.300 15 248 6.9E-82 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS09250 77ddbc6d25d5d7585a995a28fabd8cf0 378 SMART SM00382 42 225 8.9E-20 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS09250 77ddbc6d25d5d7585a995a28fabd8cf0 378 SUPERFAMILY SSF50331 250 373 2.04E-9 T 21-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal VFU_RS09250 77ddbc6d25d5d7585a995a28fabd8cf0 378 Pfam PF00005 ABC transporter 35 174 2.8E-35 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS09250 77ddbc6d25d5d7585a995a28fabd8cf0 378 SUPERFAMILY SSF52540 18 256 1.26E-87 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS09250 77ddbc6d25d5d7585a995a28fabd8cf0 378 Pfam PF08402 TOBE domain 292 372 3.0E-10 T 21-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 VFU_RS09250 77ddbc6d25d5d7585a995a28fabd8cf0 378 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS07820 3340f69c5019030903ff9646e9366049 430 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 227 259 - T 21-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VFU_RS07820 3340f69c5019030903ff9646e9366049 430 PIRSF PIRSF000099 1 427 1.2E-166 T 21-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VFU_RS07820 3340f69c5019030903ff9646e9366049 430 PANTHER PTHR21256 1 430 9.3E-290 T 21-04-2016 VFU_RS07820 3340f69c5019030903ff9646e9366049 430 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 424 41.577 T 21-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VFU_RS07820 3340f69c5019030903ff9646e9366049 430 Gene3D G3DSA:3.40.50.620 236 304 8.1E-4 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VFU_RS07820 3340f69c5019030903ff9646e9366049 430 Pfam PF00815 Histidinol dehydrogenase 27 424 8.6E-169 T 21-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VFU_RS07820 3340f69c5019030903ff9646e9366049 430 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 423 4.7E-164 T 21-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VFU_RS07820 3340f69c5019030903ff9646e9366049 430 PRINTS PR00083 Histidinol dehydrogenase signature 227 248 7.7E-101 T 21-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VFU_RS07820 3340f69c5019030903ff9646e9366049 430 PRINTS PR00083 Histidinol dehydrogenase signature 358 376 7.7E-101 T 21-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VFU_RS07820 3340f69c5019030903ff9646e9366049 430 PRINTS PR00083 Histidinol dehydrogenase signature 249 268 7.7E-101 T 21-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VFU_RS07820 3340f69c5019030903ff9646e9366049 430 PRINTS PR00083 Histidinol dehydrogenase signature 195 220 7.7E-101 T 21-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VFU_RS07820 3340f69c5019030903ff9646e9366049 430 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 7.7E-101 T 21-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VFU_RS07820 3340f69c5019030903ff9646e9366049 430 PRINTS PR00083 Histidinol dehydrogenase signature 165 191 7.7E-101 T 21-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VFU_RS07820 3340f69c5019030903ff9646e9366049 430 PRINTS PR00083 Histidinol dehydrogenase signature 134 160 7.7E-101 T 21-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VFU_RS07820 3340f69c5019030903ff9646e9366049 430 PRINTS PR00083 Histidinol dehydrogenase signature 317 342 7.7E-101 T 21-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VFU_RS07820 3340f69c5019030903ff9646e9366049 430 PANTHER PTHR21256:SF14 1 430 9.3E-290 T 21-04-2016 VFU_RS07820 3340f69c5019030903ff9646e9366049 430 Gene3D G3DSA:3.40.50.1980 28 235 1.7E-80 T 21-04-2016 VFU_RS07820 3340f69c5019030903ff9646e9366049 430 SUPERFAMILY SSF53720 4 424 2.94E-89 T 21-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 VFU_RS06695 2325714bcd7b1fbcaedd2d415e5d48bb 307 Pfam PF03601 Conserved hypothetical protein 698 27 288 2.0E-52 T 21-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 VFU_RS06695 2325714bcd7b1fbcaedd2d415e5d48bb 307 PANTHER PTHR30106 17 305 5.4E-109 T 21-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 VFU_RS06695 2325714bcd7b1fbcaedd2d415e5d48bb 307 PANTHER PTHR30106:SF1 17 305 5.4E-109 T 21-04-2016 VFU_RS09720 b0410c810aaf96456beb0a98bb73d35b 639 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 229 242 - T 21-04-2016 IPR018181 Heat shock protein 70, conserved site VFU_RS09720 b0410c810aaf96456beb0a98bb73d35b 639 PRINTS PR00301 70kDa heat shock protein signature 17 30 1.4E-8 T 21-04-2016 IPR013126 Heat shock protein 70 family VFU_RS09720 b0410c810aaf96456beb0a98bb73d35b 639 PRINTS PR00301 70kDa heat shock protein signature 419 439 1.4E-8 T 21-04-2016 IPR013126 Heat shock protein 70 family VFU_RS09720 b0410c810aaf96456beb0a98bb73d35b 639 PRINTS PR00301 70kDa heat shock protein signature 235 245 1.4E-8 T 21-04-2016 IPR013126 Heat shock protein 70 family VFU_RS09720 b0410c810aaf96456beb0a98bb73d35b 639 PRINTS PR00301 70kDa heat shock protein signature 168 188 1.4E-8 T 21-04-2016 IPR013126 Heat shock protein 70 family VFU_RS09720 b0410c810aaf96456beb0a98bb73d35b 639 SUPERFAMILY SSF53067 16 210 1.47E-28 T 21-04-2016 VFU_RS09720 b0410c810aaf96456beb0a98bb73d35b 639 Gene3D G3DSA:3.30.420.40 236 328 8.5E-19 T 21-04-2016 VFU_RS09720 b0410c810aaf96456beb0a98bb73d35b 639 Pfam PF00012 Hsp70 protein 19 347 1.0E-16 T 21-04-2016 IPR013126 Heat shock protein 70 family VFU_RS09720 b0410c810aaf96456beb0a98bb73d35b 639 SUPERFAMILY SSF53067 419 478 4.03E-26 T 21-04-2016 VFU_RS09720 b0410c810aaf96456beb0a98bb73d35b 639 SUPERFAMILY SSF53067 224 374 4.03E-26 T 21-04-2016 VFU_RS09720 b0410c810aaf96456beb0a98bb73d35b 639 PANTHER PTHR19375 16 72 1.8E-49 T 21-04-2016 VFU_RS09720 b0410c810aaf96456beb0a98bb73d35b 639 PANTHER PTHR19375 88 343 1.8E-49 T 21-04-2016 VFU_RS09720 b0410c810aaf96456beb0a98bb73d35b 639 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 21 28 - T 21-04-2016 IPR018181 Heat shock protein 70, conserved site VFU_RS09720 b0410c810aaf96456beb0a98bb73d35b 639 PANTHER PTHR19375:SF176 16 72 1.8E-49 T 21-04-2016 VFU_RS09720 b0410c810aaf96456beb0a98bb73d35b 639 PANTHER PTHR19375:SF176 88 343 1.8E-49 T 21-04-2016 VFU_RS09720 b0410c810aaf96456beb0a98bb73d35b 639 Gene3D G3DSA:3.30.420.40 17 107 5.7E-32 T 21-04-2016 VFU_RS09720 b0410c810aaf96456beb0a98bb73d35b 639 Gene3D G3DSA:3.30.420.40 146 235 5.7E-32 T 21-04-2016 VFU_RS07115 aef873cb142ab947d9c614700d5f3218 1047 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1043 0.0 T 21-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 VFU_RS07115 aef873cb142ab947d9c614700d5f3218 1047 Gene3D G3DSA:3.30.70.1430 46 142 6.8E-24 T 21-04-2016 VFU_RS07115 aef873cb142ab947d9c614700d5f3218 1047 Pfam PF00873 AcrB/AcrD/AcrF family 5 1032 7.9E-241 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS07115 aef873cb142ab947d9c614700d5f3218 1047 SUPERFAMILY SSF82693 137 184 2.62E-22 T 21-04-2016 VFU_RS07115 aef873cb142ab947d9c614700d5f3218 1047 PANTHER PTHR32063:SF19 2 1039 0.0 T 21-04-2016 VFU_RS07115 aef873cb142ab947d9c614700d5f3218 1047 SUPERFAMILY SSF82866 799 1037 1.31E-50 T 21-04-2016 VFU_RS07115 aef873cb142ab947d9c614700d5f3218 1047 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 2.4E-32 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS07115 aef873cb142ab947d9c614700d5f3218 1047 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 2.4E-32 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS07115 aef873cb142ab947d9c614700d5f3218 1047 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 2.4E-32 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS07115 aef873cb142ab947d9c614700d5f3218 1047 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 2.4E-32 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS07115 aef873cb142ab947d9c614700d5f3218 1047 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 2.4E-32 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS07115 aef873cb142ab947d9c614700d5f3218 1047 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 2.4E-32 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS07115 aef873cb142ab947d9c614700d5f3218 1047 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 2.4E-32 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS07115 aef873cb142ab947d9c614700d5f3218 1047 SUPERFAMILY SSF82693 271 328 2.62E-22 T 21-04-2016 VFU_RS07115 aef873cb142ab947d9c614700d5f3218 1047 Gene3D G3DSA:3.30.2090.10 185 269 8.3E-19 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VFU_RS07115 aef873cb142ab947d9c614700d5f3218 1047 Gene3D G3DSA:3.30.2090.10 717 800 2.0E-19 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VFU_RS07115 aef873cb142ab947d9c614700d5f3218 1047 Gene3D G3DSA:1.10.3850.10 806 1035 1.4E-52 T 21-04-2016 VFU_RS07115 aef873cb142ab947d9c614700d5f3218 1047 Gene3D G3DSA:1.10.3850.10 278 499 1.6E-67 T 21-04-2016 VFU_RS07115 aef873cb142ab947d9c614700d5f3218 1047 PANTHER PTHR32063 2 1039 0.0 T 21-04-2016 VFU_RS07115 aef873cb142ab947d9c614700d5f3218 1047 SUPERFAMILY SSF82693 46 127 2.38E-19 T 21-04-2016 VFU_RS07115 aef873cb142ab947d9c614700d5f3218 1047 SUPERFAMILY SSF82866 294 498 5.75E-43 T 21-04-2016 VFU_RS07115 aef873cb142ab947d9c614700d5f3218 1047 SUPERFAMILY SSF82714 185 269 1.96E-17 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VFU_RS07115 aef873cb142ab947d9c614700d5f3218 1047 SUPERFAMILY SSF82714 716 800 5.1E-18 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VFU_RS07940 1df211453fa7b0ba8e7310803a7a4c95 484 PANTHER PTHR12526:SF397 4 482 1.8E-143 T 21-04-2016 VFU_RS07940 1df211453fa7b0ba8e7310803a7a4c95 484 Hamap MF_00484 Glycogen synthase [glgA]. 4 481 41.035 T 21-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 VFU_RS07940 1df211453fa7b0ba8e7310803a7a4c95 484 Pfam PF00534 Glycosyl transferases group 1 297 443 1.1E-14 T 21-04-2016 IPR001296 Glycosyl transferase, family 1 VFU_RS07940 1df211453fa7b0ba8e7310803a7a4c95 484 SUPERFAMILY SSF53756 5 480 1.53E-115 T 21-04-2016 VFU_RS07940 1df211453fa7b0ba8e7310803a7a4c95 484 PANTHER PTHR12526 4 482 1.8E-143 T 21-04-2016 VFU_RS07940 1df211453fa7b0ba8e7310803a7a4c95 484 Pfam PF08323 Starch synthase catalytic domain 5 236 1.2E-69 T 21-04-2016 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 VFU_RS07940 1df211453fa7b0ba8e7310803a7a4c95 484 Gene3D G3DSA:3.40.50.2000 254 462 1.3E-66 T 21-04-2016 VFU_RS07940 1df211453fa7b0ba8e7310803a7a4c95 484 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 5 479 1.9E-158 T 21-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 VFU_RS08505 dee81065fe64a1cb65316bbe24091e57 92 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 74 2.8E-9 T 21-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VFU_RS08505 dee81065fe64a1cb65316bbe24091e57 92 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 35 43 - T 21-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VFU_RS08505 dee81065fe64a1cb65316bbe24091e57 92 SUPERFAMILY SSF54292 4 82 6.95E-18 T 21-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VFU_RS08505 dee81065fe64a1cb65316bbe24091e57 92 Gene3D G3DSA:3.10.20.30 10 81 2.1E-17 T 21-04-2016 IPR012675 Beta-grasp domain VFU_RS10440 23ded1dea19965e8cdd92bc57bc316c9 346 Gene3D G3DSA:2.120.10.30 8 346 1.0E-83 T 21-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like VFU_RS10440 23ded1dea19965e8cdd92bc57bc316c9 346 SUPERFAMILY SSF50952 6 344 3.01E-35 T 21-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 VFU_RS10440 23ded1dea19965e8cdd92bc57bc316c9 346 PANTHER PTHR19328 8 340 4.2E-51 T 21-04-2016 VFU_RS10440 23ded1dea19965e8cdd92bc57bc316c9 346 Pfam PF07995 Glucose / Sorbosone dehydrogenase 22 343 6.6E-107 T 21-04-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 VFU_RS02970 e7135d8409cce3d3f4902b629eac9053 96 PANTHER PTHR10772 1 96 4.5E-40 T 21-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VFU_RS02970 e7135d8409cce3d3f4902b629eac9053 96 SMART SM00883 2 95 2.1E-49 T 21-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VFU_RS02970 e7135d8409cce3d3f4902b629eac9053 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 21-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 VFU_RS02970 e7135d8409cce3d3f4902b629eac9053 96 SUPERFAMILY SSF50129 1 96 4.71E-31 T 21-04-2016 IPR011032 GroES-like VFU_RS02970 e7135d8409cce3d3f4902b629eac9053 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 24.67 T 21-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VFU_RS02970 e7135d8409cce3d3f4902b629eac9053 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 4.8E-31 T 21-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VFU_RS02970 e7135d8409cce3d3f4902b629eac9053 96 Gene3D G3DSA:2.30.33.40 1 96 1.6E-32 T 21-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VFU_RS02970 e7135d8409cce3d3f4902b629eac9053 96 PRINTS PR00297 10kDa chaperonin signature 60 72 1.0E-27 T 21-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VFU_RS02970 e7135d8409cce3d3f4902b629eac9053 96 PRINTS PR00297 10kDa chaperonin signature 25 46 1.0E-27 T 21-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VFU_RS02970 e7135d8409cce3d3f4902b629eac9053 96 PRINTS PR00297 10kDa chaperonin signature 82 95 1.0E-27 T 21-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VFU_RS02970 e7135d8409cce3d3f4902b629eac9053 96 PRINTS PR00297 10kDa chaperonin signature 3 18 1.0E-27 T 21-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VFU_RS03960 d0faab5273c22c0320a1a298a7f5fde2 468 Gene3D G3DSA:3.30.499.10 4 160 2.7E-22 T 21-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS03960 d0faab5273c22c0320a1a298a7f5fde2 468 PRINTS PR00415 Aconitase family signature 110 118 3.2E-50 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS03960 d0faab5273c22c0320a1a298a7f5fde2 468 PRINTS PR00415 Aconitase family signature 211 224 3.2E-50 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS03960 d0faab5273c22c0320a1a298a7f5fde2 468 PRINTS PR00415 Aconitase family signature 345 356 3.2E-50 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS03960 d0faab5273c22c0320a1a298a7f5fde2 468 PRINTS PR00415 Aconitase family signature 135 150 3.2E-50 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS03960 d0faab5273c22c0320a1a298a7f5fde2 468 PRINTS PR00415 Aconitase family signature 401 414 3.2E-50 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS03960 d0faab5273c22c0320a1a298a7f5fde2 468 PRINTS PR00415 Aconitase family signature 197 210 3.2E-50 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS03960 d0faab5273c22c0320a1a298a7f5fde2 468 PRINTS PR00415 Aconitase family signature 288 302 3.2E-50 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS03960 d0faab5273c22c0320a1a298a7f5fde2 468 PRINTS PR00415 Aconitase family signature 84 97 3.2E-50 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS03960 d0faab5273c22c0320a1a298a7f5fde2 468 PRINTS PR00415 Aconitase family signature 121 134 3.2E-50 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS03960 d0faab5273c22c0320a1a298a7f5fde2 468 Gene3D G3DSA:3.30.499.10 313 468 2.8E-64 T 21-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS03960 d0faab5273c22c0320a1a298a7f5fde2 468 Gene3D G3DSA:3.40.1060.10 168 282 3.5E-40 T 21-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS03960 d0faab5273c22c0320a1a298a7f5fde2 468 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 3 468 61.07 T 21-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS03960 d0faab5273c22c0320a1a298a7f5fde2 468 SUPERFAMILY SSF53732 4 467 6.8E-166 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS03960 d0faab5273c22c0320a1a298a7f5fde2 468 ProSitePatterns PS00450 Aconitase family signature 1. 341 357 - T 21-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS03960 d0faab5273c22c0320a1a298a7f5fde2 468 PANTHER PTHR11670:SF38 1 309 3.6E-268 T 21-04-2016 VFU_RS03960 d0faab5273c22c0320a1a298a7f5fde2 468 PANTHER PTHR11670:SF38 329 468 3.6E-268 T 21-04-2016 VFU_RS03960 d0faab5273c22c0320a1a298a7f5fde2 468 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 4 467 1.3E-266 T 21-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS03960 d0faab5273c22c0320a1a298a7f5fde2 468 PANTHER PTHR11670 1 309 3.6E-268 T 21-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS03960 d0faab5273c22c0320a1a298a7f5fde2 468 PANTHER PTHR11670 329 468 3.6E-268 T 21-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS03960 d0faab5273c22c0320a1a298a7f5fde2 468 Pfam PF00330 Aconitase family (aconitate hydratase) 9 459 2.2E-156 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS03960 d0faab5273c22c0320a1a298a7f5fde2 468 ProSitePatterns PS01244 Aconitase family signature 2. 401 414 - T 21-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS12035 6fbd7f5532155a0e5764ae9acc59d279 277 SUPERFAMILY SSF55021 4 65 8.74E-9 T 21-04-2016 VFU_RS12035 6fbd7f5532155a0e5764ae9acc59d279 277 Pfam PF00551 Formyl transferase 82 259 4.7E-49 T 21-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VFU_RS12035 6fbd7f5532155a0e5764ae9acc59d279 277 PANTHER PTHR10520 6 271 3.3E-133 T 21-04-2016 VFU_RS12035 6fbd7f5532155a0e5764ae9acc59d279 277 Gene3D G3DSA:3.30.70.260 3 70 2.8E-11 T 21-04-2016 VFU_RS12035 6fbd7f5532155a0e5764ae9acc59d279 277 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 5 277 2.8E-122 T 21-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 VFU_RS12035 6fbd7f5532155a0e5764ae9acc59d279 277 Pfam PF01842 ACT domain 5 66 4.1E-8 T 21-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 VFU_RS12035 6fbd7f5532155a0e5764ae9acc59d279 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 83 105 9.2E-63 T 21-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 VFU_RS12035 6fbd7f5532155a0e5764ae9acc59d279 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 251 276 9.2E-63 T 21-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 VFU_RS12035 6fbd7f5532155a0e5764ae9acc59d279 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 9.2E-63 T 21-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 VFU_RS12035 6fbd7f5532155a0e5764ae9acc59d279 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 9.2E-63 T 21-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 VFU_RS12035 6fbd7f5532155a0e5764ae9acc59d279 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 105 132 9.2E-63 T 21-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 VFU_RS12035 6fbd7f5532155a0e5764ae9acc59d279 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 229 251 9.2E-63 T 21-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 VFU_RS12035 6fbd7f5532155a0e5764ae9acc59d279 277 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 277 44.475 T 21-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 VFU_RS12035 6fbd7f5532155a0e5764ae9acc59d279 277 SUPERFAMILY SSF53328 82 276 3.14E-59 T 21-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VFU_RS12035 6fbd7f5532155a0e5764ae9acc59d279 277 Gene3D G3DSA:3.40.50.170 82 275 2.7E-55 T 21-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VFU_RS12035 6fbd7f5532155a0e5764ae9acc59d279 277 PIRSF PIRSF036480 1 277 1.7E-110 T 21-04-2016 VFU_RS12035 6fbd7f5532155a0e5764ae9acc59d279 277 PANTHER PTHR10520:SF7 6 271 3.3E-133 T 21-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 VFU_RS10810 66a252dff7c41ed58e9592916d57635c 287 Gene3D G3DSA:1.10.10.10 6 79 2.3E-24 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS10810 66a252dff7c41ed58e9592916d57635c 287 Pfam PF01418 Helix-turn-helix domain, rpiR family 7 78 1.4E-15 T 21-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 VFU_RS10810 66a252dff7c41ed58e9592916d57635c 287 SUPERFAMILY SSF53697 97 260 9.91E-35 T 21-04-2016 VFU_RS10810 66a252dff7c41ed58e9592916d57635c 287 PANTHER PTHR30514:SF1 4 277 1.2E-62 T 21-04-2016 VFU_RS10810 66a252dff7c41ed58e9592916d57635c 287 PANTHER PTHR30514 4 277 1.2E-62 T 21-04-2016 VFU_RS10810 66a252dff7c41ed58e9592916d57635c 287 Pfam PF01380 SIS domain 124 250 2.2E-17 T 21-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 VFU_RS10810 66a252dff7c41ed58e9592916d57635c 287 Gene3D G3DSA:3.40.50.10490 96 265 1.0E-31 T 21-04-2016 VFU_RS10810 66a252dff7c41ed58e9592916d57635c 287 SUPERFAMILY SSF46689 5 79 3.94E-18 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS11165 f28f0bf48ec6c759577a9f6fff12e44c 312 SUPERFAMILY SSF75005 6 310 4.83E-63 T 21-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain VFU_RS11165 f28f0bf48ec6c759577a9f6fff12e44c 312 PANTHER PTHR22925 6 308 1.1E-92 T 21-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 VFU_RS11165 f28f0bf48ec6c759577a9f6fff12e44c 312 PANTHER PTHR22925:SF12 6 308 1.1E-92 T 21-04-2016 VFU_RS11165 f28f0bf48ec6c759577a9f6fff12e44c 312 Pfam PF04616 Glycosyl hydrolases family 43 6 306 3.2E-65 T 21-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 VFU_RS11165 f28f0bf48ec6c759577a9f6fff12e44c 312 PIRSF PIRSF025414 1 312 1.5E-129 T 21-04-2016 IPR016828 Alpha-L-arabinofuranosidase KEGG: 00520+3.2.1.55|UniPathway: UPA00667 VFU_RS11165 f28f0bf48ec6c759577a9f6fff12e44c 312 Gene3D G3DSA:2.115.10.20 4 309 7.2E-87 T 21-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain VFU_RS07560 74818e031b1672997ef900c496fd93d0 306 PANTHER PTHR30465:SF74 1 306 1.2E-156 T 21-04-2016 VFU_RS07560 74818e031b1672997ef900c496fd93d0 306 Gene3D G3DSA:1.10.3720.10 88 302 3.9E-20 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS07560 74818e031b1672997ef900c496fd93d0 306 PANTHER PTHR30465 1 306 1.2E-156 T 21-04-2016 VFU_RS07560 74818e031b1672997ef900c496fd93d0 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 7.0E-42 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS07560 74818e031b1672997ef900c496fd93d0 306 SUPERFAMILY SSF161098 88 290 6.92E-21 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS01660 ef1b4862ab12bd879e12e01f93cf6c1d 109 Pfam PF00893 Small Multidrug Resistance protein 6 96 6.4E-22 T 21-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 VFU_RS01660 ef1b4862ab12bd879e12e01f93cf6c1d 109 PANTHER PTHR30561:SF1 1 109 3.8E-28 T 21-04-2016 VFU_RS01660 ef1b4862ab12bd879e12e01f93cf6c1d 109 PANTHER PTHR30561 1 109 3.8E-28 T 21-04-2016 VFU_RS01660 ef1b4862ab12bd879e12e01f93cf6c1d 109 SUPERFAMILY SSF103481 8 107 1.06E-17 T 21-04-2016 VFU_RS08925 bd5de635a0b05f2dbcb938c31defa87e 370 Gene3D G3DSA:3.40.630.10 4 177 2.8E-66 T 21-04-2016 VFU_RS08925 bd5de635a0b05f2dbcb938c31defa87e 370 Gene3D G3DSA:3.40.630.10 287 364 2.8E-66 T 21-04-2016 VFU_RS08925 bd5de635a0b05f2dbcb938c31defa87e 370 PANTHER PTHR11014:SF61 1 361 3.0E-133 T 21-04-2016 VFU_RS08925 bd5de635a0b05f2dbcb938c31defa87e 370 Gene3D G3DSA:3.30.70.360 178 281 1.8E-23 T 21-04-2016 IPR011650 Peptidase M20, dimerisation domain VFU_RS08925 bd5de635a0b05f2dbcb938c31defa87e 370 Pfam PF01546 Peptidase family M20/M25/M40 73 366 1.2E-18 T 21-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 VFU_RS08925 bd5de635a0b05f2dbcb938c31defa87e 370 SUPERFAMILY SSF55031 177 289 6.8E-22 T 21-04-2016 IPR011650 Peptidase M20, dimerisation domain VFU_RS08925 bd5de635a0b05f2dbcb938c31defa87e 370 PANTHER PTHR11014 1 361 3.0E-133 T 21-04-2016 VFU_RS08925 bd5de635a0b05f2dbcb938c31defa87e 370 TIGRFAM TIGR01883 PepT-like: peptidase T-like protein 8 362 3.0E-158 T 21-04-2016 IPR010162 Peptidase M20B, peptidase T VFU_RS08925 bd5de635a0b05f2dbcb938c31defa87e 370 SUPERFAMILY SSF53187 7 175 5.76E-57 T 21-04-2016 VFU_RS08925 bd5de635a0b05f2dbcb938c31defa87e 370 SUPERFAMILY SSF53187 287 366 5.76E-57 T 21-04-2016 VFU_RS08925 bd5de635a0b05f2dbcb938c31defa87e 370 Pfam PF07687 Peptidase dimerisation domain 180 273 1.4E-14 T 21-04-2016 IPR011650 Peptidase M20, dimerisation domain VFU_RS12065 23d2e72ef4b883c930671def43ead152 138 PANTHER PTHR10173 8 135 1.4E-57 T 21-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 VFU_RS12065 23d2e72ef4b883c930671def43ead152 138 Pfam PF01641 SelR domain 15 132 4.6E-52 T 21-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 VFU_RS12065 23d2e72ef4b883c930671def43ead152 138 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 9 134 36.637 T 21-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 VFU_RS12065 23d2e72ef4b883c930671def43ead152 138 PANTHER PTHR10173:SF18 8 135 1.4E-57 T 21-04-2016 VFU_RS12065 23d2e72ef4b883c930671def43ead152 138 SUPERFAMILY SSF51316 9 136 7.85E-57 T 21-04-2016 IPR011057 Mss4-like VFU_RS12065 23d2e72ef4b883c930671def43ead152 138 Gene3D G3DSA:2.170.150.20 5 136 4.6E-60 T 21-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 VFU_RS12065 23d2e72ef4b883c930671def43ead152 138 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 10 135 2.4E-55 T 21-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 VFU_RS05230 713d14d28b31e1fd2fb91d4de593e8c2 168 SUPERFAMILY SSF101307 8 161 3.01E-47 T 21-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 VFU_RS05230 713d14d28b31e1fd2fb91d4de593e8c2 168 Pfam PF04608 Phosphatidylglycerophosphatase A 15 160 1.4E-52 T 21-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 VFU_RS05230 713d14d28b31e1fd2fb91d4de593e8c2 168 PANTHER PTHR36305 1 166 3.8E-71 T 21-04-2016 VFU_RS05230 713d14d28b31e1fd2fb91d4de593e8c2 168 PIRSF PIRSF006162 4 166 5.0E-55 T 21-04-2016 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 VFU_RS12000 3a8abbe00c0584994013eeb0aba4cbfe 565 Gene3D G3DSA:2.30.38.10 379 452 3.0E-31 T 21-04-2016 VFU_RS12000 3a8abbe00c0584994013eeb0aba4cbfe 565 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 21-04-2016 IPR020845 AMP-binding, conserved site VFU_RS12000 3a8abbe00c0584994013eeb0aba4cbfe 565 PANTHER PTHR24096 11 153 2.3E-170 T 21-04-2016 VFU_RS12000 3a8abbe00c0584994013eeb0aba4cbfe 565 PANTHER PTHR24096 176 554 2.3E-170 T 21-04-2016 VFU_RS12000 3a8abbe00c0584994013eeb0aba4cbfe 565 Pfam PF00501 AMP-binding enzyme 29 461 1.4E-107 T 21-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VFU_RS12000 3a8abbe00c0584994013eeb0aba4cbfe 565 Gene3D G3DSA:3.40.50.980 217 378 2.4E-41 T 21-04-2016 VFU_RS12000 3a8abbe00c0584994013eeb0aba4cbfe 565 SUPERFAMILY SSF56801 13 553 2.09E-148 T 21-04-2016 VFU_RS12000 3a8abbe00c0584994013eeb0aba4cbfe 565 Pfam PF13193 AMP-binding enzyme C-terminal domain 470 544 1.2E-16 T 21-04-2016 IPR025110 AMP-binding enzyme C-terminal domain VFU_RS12000 3a8abbe00c0584994013eeb0aba4cbfe 565 Gene3D G3DSA:3.40.50.980 24 152 1.5E-39 T 21-04-2016 VFU_RS12000 3a8abbe00c0584994013eeb0aba4cbfe 565 Gene3D G3DSA:3.40.50.980 185 216 1.5E-39 T 21-04-2016 VFU_RS12000 3a8abbe00c0584994013eeb0aba4cbfe 565 Gene3D G3DSA:3.30.300.30 456 552 2.1E-26 T 21-04-2016 VFU_RS04445 2df547fb104ca079686654ccadb75996 470 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 2 135 6.4E-36 T 21-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VFU_RS04445 2df547fb104ca079686654ccadb75996 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 214 227 2.1E-11 T 21-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VFU_RS04445 2df547fb104ca079686654ccadb75996 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 242 257 2.1E-11 T 21-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VFU_RS04445 2df547fb104ca079686654ccadb75996 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 2.1E-11 T 21-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VFU_RS04445 2df547fb104ca079686654ccadb75996 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 180 199 2.1E-11 T 21-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VFU_RS04445 2df547fb104ca079686654ccadb75996 470 PANTHER PTHR22573:SF2 1 468 1.0E-129 T 21-04-2016 VFU_RS04445 2df547fb104ca079686654ccadb75996 470 Gene3D G3DSA:3.40.120.10 181 255 9.3E-24 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VFU_RS04445 2df547fb104ca079686654ccadb75996 470 Gene3D G3DSA:3.40.120.10 2 179 4.7E-45 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VFU_RS04445 2df547fb104ca079686654ccadb75996 470 Gene3D G3DSA:3.40.120.10 256 382 2.7E-34 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VFU_RS04445 2df547fb104ca079686654ccadb75996 470 PANTHER PTHR22573 1 468 1.0E-129 T 21-04-2016 VFU_RS04445 2df547fb104ca079686654ccadb75996 470 SUPERFAMILY SSF55957 374 466 1.44E-18 T 21-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VFU_RS04445 2df547fb104ca079686654ccadb75996 470 Gene3D G3DSA:3.30.310.50 395 468 3.7E-19 T 21-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VFU_RS04445 2df547fb104ca079686654ccadb75996 470 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 419 464 3.5E-9 T 21-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VFU_RS04445 2df547fb104ca079686654ccadb75996 470 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 267 378 2.6E-25 T 21-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VFU_RS04445 2df547fb104ca079686654ccadb75996 470 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 162 262 4.2E-24 T 21-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VFU_RS04445 2df547fb104ca079686654ccadb75996 470 SUPERFAMILY SSF53738 2 187 1.96E-38 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VFU_RS04445 2df547fb104ca079686654ccadb75996 470 SUPERFAMILY SSF53738 250 379 3.1E-29 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VFU_RS04210 ce391a0c7250843000ff2998f067a478 476 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 332 472 3.9E-62 T 21-04-2016 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 VFU_RS04210 ce391a0c7250843000ff2998f067a478 476 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 42.994 T 21-04-2016 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 VFU_RS04210 ce391a0c7250843000ff2998f067a478 476 PANTHER PTHR10584 1 340 9.2E-144 T 21-04-2016 VFU_RS04210 ce391a0c7250843000ff2998f067a478 476 Pfam PF00294 pfkB family carbohydrate kinase 13 302 1.4E-49 T 21-04-2016 IPR011611 Carbohydrate kinase PfkB VFU_RS04210 ce391a0c7250843000ff2998f067a478 476 SUPERFAMILY SSF53613 12 307 3.27E-58 T 21-04-2016 IPR029056 Ribokinase-like VFU_RS04210 ce391a0c7250843000ff2998f067a478 476 Gene3D G3DSA:3.40.1190.20 13 313 1.4E-67 T 21-04-2016 IPR029056 Ribokinase-like VFU_RS04210 ce391a0c7250843000ff2998f067a478 476 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 21-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VFU_RS04210 ce391a0c7250843000ff2998f067a478 476 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 7 312 6.9E-127 T 21-04-2016 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 VFU_RS04210 ce391a0c7250843000ff2998f067a478 476 Pfam PF01467 Cytidylyltransferase-like 345 469 4.4E-16 T 21-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VFU_RS04210 ce391a0c7250843000ff2998f067a478 476 PANTHER PTHR10584:SF159 1 340 9.2E-144 T 21-04-2016 VFU_RS04210 ce391a0c7250843000ff2998f067a478 476 Gene3D G3DSA:3.40.50.620 340 461 8.9E-36 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VFU_RS04210 ce391a0c7250843000ff2998f067a478 476 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 2.8E-18 T 21-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VFU_RS04210 ce391a0c7250843000ff2998f067a478 476 SUPERFAMILY SSF52374 340 471 3.85E-24 T 21-04-2016 VFU_RS11825 8f0a9275e2bf626e20c10eae483895ed 377 Gene3D G3DSA:3.30.70.80 32 94 3.4E-13 T 21-04-2016 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 VFU_RS11825 8f0a9275e2bf626e20c10eae483895ed 377 PRINTS PR00723 Subtilisin serine protease family (S8) signature 139 158 3.2E-17 T 21-04-2016 IPR015500 Peptidase S8, subtilisin-related VFU_RS11825 8f0a9275e2bf626e20c10eae483895ed 377 PRINTS PR00723 Subtilisin serine protease family (S8) signature 178 191 3.2E-17 T 21-04-2016 IPR015500 Peptidase S8, subtilisin-related VFU_RS11825 8f0a9275e2bf626e20c10eae483895ed 377 PRINTS PR00723 Subtilisin serine protease family (S8) signature 337 353 3.2E-17 T 21-04-2016 IPR015500 Peptidase S8, subtilisin-related VFU_RS11825 8f0a9275e2bf626e20c10eae483895ed 377 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 182 192 - T 21-04-2016 IPR022398 Peptidase S8, subtilisin, His-active site VFU_RS11825 8f0a9275e2bf626e20c10eae483895ed 377 PANTHER PTHR10795 125 350 1.7E-65 T 21-04-2016 IPR015500 Peptidase S8, subtilisin-related VFU_RS11825 8f0a9275e2bf626e20c10eae483895ed 377 PANTHER PTHR10795 1 103 1.7E-65 T 21-04-2016 IPR015500 Peptidase S8, subtilisin-related VFU_RS11825 8f0a9275e2bf626e20c10eae483895ed 377 SUPERFAMILY SSF54897 31 101 4.7E-11 T 21-04-2016 IPR009020 Proteinase inhibitor, propeptide VFU_RS11825 8f0a9275e2bf626e20c10eae483895ed 377 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 338 348 - T 21-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site VFU_RS11825 8f0a9275e2bf626e20c10eae483895ed 377 SUPERFAMILY SSF52743 124 351 8.51E-58 T 21-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 VFU_RS11825 8f0a9275e2bf626e20c10eae483895ed 377 PANTHER PTHR10795:SF389 125 350 1.7E-65 T 21-04-2016 VFU_RS11825 8f0a9275e2bf626e20c10eae483895ed 377 PANTHER PTHR10795:SF389 1 103 1.7E-65 T 21-04-2016 VFU_RS11825 8f0a9275e2bf626e20c10eae483895ed 377 Pfam PF00082 Subtilase family 146 352 5.7E-34 T 21-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 VFU_RS11825 8f0a9275e2bf626e20c10eae483895ed 377 Gene3D G3DSA:3.40.50.200 95 354 6.4E-65 T 21-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 VFU_RS14315 48a7a4ad4d16b6f6c8585c4ac1511f1a 421 PANTHER PTHR19271 247 414 3.2E-269 T 21-04-2016 VFU_RS14315 48a7a4ad4d16b6f6c8585c4ac1511f1a 421 PANTHER PTHR19271 1 221 3.2E-269 T 21-04-2016 VFU_RS14315 48a7a4ad4d16b6f6c8585c4ac1511f1a 421 Gene3D G3DSA:1.20.810.10 6 415 3.7E-158 T 21-04-2016 IPR027387 Cytochrome b/b6-like domain VFU_RS14315 48a7a4ad4d16b6f6c8585c4ac1511f1a 421 Pfam PF00033 Cytochrome b/b6/petB 23 211 1.5E-66 T 21-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 VFU_RS14315 48a7a4ad4d16b6f6c8585c4ac1511f1a 421 SUPERFAMILY SSF81342 248 296 2.98E-93 T 21-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 VFU_RS14315 48a7a4ad4d16b6f6c8585c4ac1511f1a 421 SUPERFAMILY SSF81342 6 221 2.98E-93 T 21-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 VFU_RS14315 48a7a4ad4d16b6f6c8585c4ac1511f1a 421 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 295 396 5.6E-41 T 21-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 VFU_RS14315 48a7a4ad4d16b6f6c8585c4ac1511f1a 421 PANTHER PTHR19271:SF9 247 414 3.2E-269 T 21-04-2016 VFU_RS14315 48a7a4ad4d16b6f6c8585c4ac1511f1a 421 PANTHER PTHR19271:SF9 1 221 3.2E-269 T 21-04-2016 VFU_RS14315 48a7a4ad4d16b6f6c8585c4ac1511f1a 421 SUPERFAMILY SSF81648 297 411 3.71E-33 T 21-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 VFU_RS14315 48a7a4ad4d16b6f6c8585c4ac1511f1a 421 PIRSF PIRSF038885 1 421 2.4E-153 T 21-04-2016 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 VFU_RS08930 56d47c0fdae06f143bfa83277422a816 513 PANTHER PTHR33121 205 492 5.7E-70 T 21-04-2016 VFU_RS08930 56d47c0fdae06f143bfa83277422a816 513 PANTHER PTHR33121 86 114 5.7E-70 T 21-04-2016 VFU_RS08930 56d47c0fdae06f143bfa83277422a816 513 SUPERFAMILY SSF141868 256 494 8.11E-68 T 21-04-2016 IPR001633 EAL domain VFU_RS08930 56d47c0fdae06f143bfa83277422a816 513 Pfam PF12792 CSS motif domain associated with EAL 47 162 5.9E-7 T 21-04-2016 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain VFU_RS08930 56d47c0fdae06f143bfa83277422a816 513 SMART SM00052 250 492 8.9E-74 T 21-04-2016 IPR001633 EAL domain VFU_RS08930 56d47c0fdae06f143bfa83277422a816 513 PANTHER PTHR33121:SF1 205 492 5.7E-70 T 21-04-2016 VFU_RS08930 56d47c0fdae06f143bfa83277422a816 513 PANTHER PTHR33121:SF1 86 114 5.7E-70 T 21-04-2016 VFU_RS08930 56d47c0fdae06f143bfa83277422a816 513 Pfam PF00563 EAL domain 257 487 2.3E-58 T 21-04-2016 IPR001633 EAL domain VFU_RS08930 56d47c0fdae06f143bfa83277422a816 513 Gene3D G3DSA:3.20.20.450 254 493 3.2E-68 T 21-04-2016 IPR001633 EAL domain VFU_RS06045 b92149c39b201dd259c8ec16c8bbf1a0 381 SUPERFAMILY SSF52283 4 130 2.34E-22 T 21-04-2016 VFU_RS06045 b92149c39b201dd259c8ec16c8bbf1a0 381 Gene3D G3DSA:3.40.50.720 1 115 1.3E-32 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS06045 b92149c39b201dd259c8ec16c8bbf1a0 381 SUPERFAMILY SSF51735 93 258 1.44E-34 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS06045 b92149c39b201dd259c8ec16c8bbf1a0 381 PANTHER PTHR10996 1 331 2.5E-167 T 21-04-2016 VFU_RS06045 b92149c39b201dd259c8ec16c8bbf1a0 381 Pfam PF11890 Domain of unknown function (DUF3410) 290 370 8.5E-29 T 21-04-2016 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181|UniPathway: UPA00244 VFU_RS06045 b92149c39b201dd259c8ec16c8bbf1a0 381 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 281 1.5E-22 T 21-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 VFU_RS06045 b92149c39b201dd259c8ec16c8bbf1a0 381 Gene3D G3DSA:3.40.50.720 116 259 2.3E-36 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS06045 b92149c39b201dd259c8ec16c8bbf1a0 381 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 198 214 - T 21-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VFU_RS06045 b92149c39b201dd259c8ec16c8bbf1a0 381 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 358 45.443 T 21-04-2016 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181|UniPathway: UPA00244 VFU_RS06045 b92149c39b201dd259c8ec16c8bbf1a0 381 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 257 6.0E-33 T 21-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VFU_RS06045 b92149c39b201dd259c8ec16c8bbf1a0 381 PANTHER PTHR10996:SF111 1 331 2.5E-167 T 21-04-2016 VFU_RS13015 db09e54897a6b9ba224ed55711490e75 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 129 2.4E-48 T 21-04-2016 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 VFU_RS13015 db09e54897a6b9ba224ed55711490e75 281 PANTHER PTHR34354:SF1 2 281 6.1E-102 T 21-04-2016 VFU_RS13015 db09e54897a6b9ba224ed55711490e75 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 160.272 T 21-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 VFU_RS13015 db09e54897a6b9ba224ed55711490e75 281 Gene3D G3DSA:3.30.1130.10 144 280 1.6E-54 T 21-04-2016 VFU_RS13015 db09e54897a6b9ba224ed55711490e75 281 SUPERFAMILY SSF55620 184 267 6.82E-9 T 21-04-2016 VFU_RS13015 db09e54897a6b9ba224ed55711490e75 281 TIGRFAM TIGR03138 QueF: queuine synthase 11 281 5.1E-127 T 21-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 VFU_RS13015 db09e54897a6b9ba224ed55711490e75 281 PANTHER PTHR34354 2 281 6.1E-102 T 21-04-2016 VFU_RS13015 db09e54897a6b9ba224ed55711490e75 281 Gene3D G3DSA:3.30.1130.10 21 133 1.1E-44 T 21-04-2016 VFU_RS13015 db09e54897a6b9ba224ed55711490e75 281 Pfam PF14489 QueF-like protein 194 270 8.1E-26 T 21-04-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 VFU_RS13015 db09e54897a6b9ba224ed55711490e75 281 PIRSF PIRSF004750 6 281 9.8E-129 T 21-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 VFU_RS03305 1dc3f83136094783a7b663c808a99eff 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 21-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 VFU_RS03305 1dc3f83136094783a7b663c808a99eff 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.757 T 21-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 VFU_RS03305 1dc3f83136094783a7b663c808a99eff 92 PANTHER PTHR11880 1 91 6.8E-58 T 21-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 VFU_RS03305 1dc3f83136094783a7b663c808a99eff 92 SUPERFAMILY SSF54570 3 84 1.01E-35 T 21-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 VFU_RS03305 1dc3f83136094783a7b663c808a99eff 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 1.1E-46 T 21-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 VFU_RS03305 1dc3f83136094783a7b663c808a99eff 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 6.9E-25 T 21-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 VFU_RS03305 1dc3f83136094783a7b663c808a99eff 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 6.9E-25 T 21-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 VFU_RS03305 1dc3f83136094783a7b663c808a99eff 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 6.9E-25 T 21-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 VFU_RS03305 1dc3f83136094783a7b663c808a99eff 92 Pfam PF00203 Ribosomal protein S19 3 83 2.9E-37 T 21-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 VFU_RS03305 1dc3f83136094783a7b663c808a99eff 92 Gene3D G3DSA:3.30.860.10 1 91 2.3E-41 T 21-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 VFU_RS03305 1dc3f83136094783a7b663c808a99eff 92 PIRSF PIRSF002144 1 92 9.2E-32 T 21-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 VFU_RS08495 dd32389523f026110de3fe16fa8d13b2 413 Pfam PF00994 Probable molybdopterin binding domain 5 170 2.2E-31 T 21-04-2016 IPR001453 MoaB/Mog domain VFU_RS08495 dd32389523f026110de3fe16fa8d13b2 413 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 2 164 2.9E-26 T 21-04-2016 IPR001453 MoaB/Mog domain VFU_RS08495 dd32389523f026110de3fe16fa8d13b2 413 Gene3D G3DSA:3.40.980.10 2 204 1.5E-30 T 21-04-2016 IPR001453 MoaB/Mog domain VFU_RS08495 dd32389523f026110de3fe16fa8d13b2 413 PIRSF PIRSF006728 1 392 2.4E-113 T 21-04-2016 IPR008135 Competence-induced protein CinA VFU_RS08495 dd32389523f026110de3fe16fa8d13b2 413 PANTHER PTHR13939:SF3 2 287 1.4E-154 T 21-04-2016 VFU_RS08495 dd32389523f026110de3fe16fa8d13b2 413 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 404 1.5E-78 T 21-04-2016 IPR008135 Competence-induced protein CinA VFU_RS08495 dd32389523f026110de3fe16fa8d13b2 413 PANTHER PTHR13939 2 287 1.4E-154 T 21-04-2016 VFU_RS08495 dd32389523f026110de3fe16fa8d13b2 413 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 412 102.03 T 21-04-2016 IPR008135 Competence-induced protein CinA VFU_RS08495 dd32389523f026110de3fe16fa8d13b2 413 SMART SM00852 5 172 1.1E-31 T 21-04-2016 IPR001453 MoaB/Mog domain VFU_RS08495 dd32389523f026110de3fe16fa8d13b2 413 SUPERFAMILY SSF53218 2 206 9.82E-37 T 21-04-2016 IPR001453 MoaB/Mog domain VFU_RS09790 9e72f05969d19d2269de0af237a3b788 274 PANTHER PTHR10000 1 268 8.4E-134 T 21-04-2016 VFU_RS09790 9e72f05969d19d2269de0af237a3b788 274 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 262 1.2E-65 T 21-04-2016 IPR023214 HAD-like domain VFU_RS09790 9e72f05969d19d2269de0af237a3b788 274 ProSitePatterns PS01229 Hypothetical cof family signature 2. 216 238 - T 21-04-2016 VFU_RS09790 9e72f05969d19d2269de0af237a3b788 274 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 262 7.1E-61 T 21-04-2016 IPR000150 Cof protein GO:0016787 VFU_RS09790 9e72f05969d19d2269de0af237a3b788 274 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 21-04-2016 IPR000150 Cof protein GO:0016787 VFU_RS09790 9e72f05969d19d2269de0af237a3b788 274 Gene3D G3DSA:3.30.1240.10 87 180 4.8E-31 T 21-04-2016 VFU_RS09790 9e72f05969d19d2269de0af237a3b788 274 Gene3D G3DSA:3.40.50.1000 181 268 2.4E-57 T 21-04-2016 IPR023214 HAD-like domain VFU_RS09790 9e72f05969d19d2269de0af237a3b788 274 Gene3D G3DSA:3.40.50.1000 1 75 2.4E-57 T 21-04-2016 IPR023214 HAD-like domain VFU_RS09790 9e72f05969d19d2269de0af237a3b788 274 PANTHER PTHR10000:SF29 1 268 8.4E-134 T 21-04-2016 VFU_RS09790 9e72f05969d19d2269de0af237a3b788 274 SUPERFAMILY SSF56784 1 266 1.28E-74 T 21-04-2016 IPR023214 HAD-like domain VFU_RS09790 9e72f05969d19d2269de0af237a3b788 274 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 235 6.5E-28 T 21-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 VFU_RS22760 040f221780d02365c887cf3b5b2ac731 195 SMART SM00877 3 79 2.1E-19 T 21-04-2016 IPR000249 Microcompartment protein, bacteria VFU_RS22760 040f221780d02365c887cf3b5b2ac731 195 SUPERFAMILY SSF143414 4 88 5.49E-19 T 21-04-2016 VFU_RS22760 040f221780d02365c887cf3b5b2ac731 195 PANTHER PTHR33941 1 87 4.1E-16 T 21-04-2016 VFU_RS22760 040f221780d02365c887cf3b5b2ac731 195 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 4 49 5.0E-4 T 21-04-2016 VFU_RS22760 040f221780d02365c887cf3b5b2ac731 195 Pfam PF00936 BMC domain 4 66 6.0E-18 T 21-04-2016 IPR000249 Microcompartment protein, bacteria VFU_RS11735 753d24be456e0624127d4512864c7a9c 231 PANTHER PTHR32119:SF2 1 230 1.6E-120 T 21-04-2016 VFU_RS11735 753d24be456e0624127d4512864c7a9c 231 Gene3D G3DSA:3.20.20.70 2 229 1.2E-90 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS11735 753d24be456e0624127d4512864c7a9c 231 SUPERFAMILY SSF51366 3 229 1.44E-78 T 21-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 VFU_RS11735 753d24be456e0624127d4512864c7a9c 231 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 225 3.8E-54 T 21-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 VFU_RS11735 753d24be456e0624127d4512864c7a9c 231 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 3 231 40.078 T 21-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 VFU_RS11735 753d24be456e0624127d4512864c7a9c 231 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 57 70 - T 21-04-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 VFU_RS11735 753d24be456e0624127d4512864c7a9c 231 SMART SM00934 5 226 3.9E-101 T 21-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 VFU_RS11735 753d24be456e0624127d4512864c7a9c 231 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 6 226 2.0E-58 T 21-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 VFU_RS11735 753d24be456e0624127d4512864c7a9c 231 PANTHER PTHR32119 1 230 1.6E-120 T 21-04-2016 VFU_RS14310 9ae440ff383cd88845763c281a9a218c 245 PANTHER PTHR10266:SF3 188 245 1.4E-84 T 21-04-2016 VFU_RS14310 9ae440ff383cd88845763c281a9a218c 245 PANTHER PTHR10266:SF3 1 162 1.4E-84 T 21-04-2016 VFU_RS14310 9ae440ff383cd88845763c281a9a218c 245 Gene3D G3DSA:1.20.5.100 214 245 6.1E-10 T 21-04-2016 VFU_RS14310 9ae440ff383cd88845763c281a9a218c 245 Gene3D G3DSA:1.10.760.10 16 210 3.4E-62 T 21-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VFU_RS14310 9ae440ff383cd88845763c281a9a218c 245 Pfam PF02167 Cytochrome C1 family 34 244 2.2E-16 T 21-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 VFU_RS14310 9ae440ff383cd88845763c281a9a218c 245 SUPERFAMILY SSF46626 16 209 9.17E-49 T 21-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VFU_RS14310 9ae440ff383cd88845763c281a9a218c 245 PANTHER PTHR10266 188 245 1.4E-84 T 21-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 VFU_RS14310 9ae440ff383cd88845763c281a9a218c 245 PANTHER PTHR10266 1 162 1.4E-84 T 21-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 VFU_RS07430 0ba0ccf9279847d7cbafc7f12637963e 328 SUPERFAMILY SSF53822 58 318 2.94E-58 T 21-04-2016 IPR028082 Periplasmic binding protein-like I VFU_RS07430 0ba0ccf9279847d7cbafc7f12637963e 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.1E-6 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VFU_RS07430 0ba0ccf9279847d7cbafc7f12637963e 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.1E-6 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VFU_RS07430 0ba0ccf9279847d7cbafc7f12637963e 328 Gene3D G3DSA:3.40.50.2300 174 308 2.2E-34 T 21-04-2016 VFU_RS07430 0ba0ccf9279847d7cbafc7f12637963e 328 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VFU_RS07430 0ba0ccf9279847d7cbafc7f12637963e 328 PANTHER PTHR30146 1 328 2.1E-108 T 21-04-2016 VFU_RS07430 0ba0ccf9279847d7cbafc7f12637963e 328 PANTHER PTHR30146:SF30 1 328 2.1E-108 T 21-04-2016 VFU_RS07430 0ba0ccf9279847d7cbafc7f12637963e 328 SMART SM00354 1 71 3.1E-33 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VFU_RS07430 0ba0ccf9279847d7cbafc7f12637963e 328 SUPERFAMILY SSF47413 1 60 2.55E-16 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VFU_RS07430 0ba0ccf9279847d7cbafc7f12637963e 328 Pfam PF13377 Periplasmic binding protein-like domain 170 328 6.8E-28 T 21-04-2016 VFU_RS07430 0ba0ccf9279847d7cbafc7f12637963e 328 Gene3D G3DSA:1.10.260.40 3 53 5.7E-23 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VFU_RS07430 0ba0ccf9279847d7cbafc7f12637963e 328 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 4.8E-18 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VFU_RS07430 0ba0ccf9279847d7cbafc7f12637963e 328 Gene3D G3DSA:3.40.50.2300 54 173 3.1E-37 T 21-04-2016 VFU_RS04215 a227eb2798514f6e2f4bd265ddda6679 439 Gene3D G3DSA:1.20.1600.10 18 427 6.0E-82 T 21-04-2016 VFU_RS04215 a227eb2798514f6e2f4bd265ddda6679 439 SUPERFAMILY SSF56954 2 426 4.32E-93 T 21-04-2016 VFU_RS04215 a227eb2798514f6e2f4bd265ddda6679 439 Pfam PF02321 Outer membrane efflux protein 25 207 2.7E-30 T 21-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VFU_RS04215 a227eb2798514f6e2f4bd265ddda6679 439 Pfam PF02321 Outer membrane efflux protein 231 420 1.5E-32 T 21-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VFU_RS04215 a227eb2798514f6e2f4bd265ddda6679 439 PANTHER PTHR30026:SF3 1 434 1.5E-144 T 21-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 VFU_RS04215 a227eb2798514f6e2f4bd265ddda6679 439 PANTHER PTHR30026 1 434 1.5E-144 T 21-04-2016 VFU_RS04215 a227eb2798514f6e2f4bd265ddda6679 439 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 22 434 1.1E-110 T 21-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 VFU_RS13980 17ad8c31ce256f10ce605389c1bf2cef 442 Gene3D G3DSA:3.90.1170.30 339 432 2.2E-33 T 21-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 VFU_RS13980 17ad8c31ce256f10ce605389c1bf2cef 442 SUPERFAMILY SSF54680 337 437 5.89E-29 T 21-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 VFU_RS13980 17ad8c31ce256f10ce605389c1bf2cef 442 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 350 423 3.1E-23 T 21-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 VFU_RS13980 17ad8c31ce256f10ce605389c1bf2cef 442 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 1.2E-21 T 21-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain VFU_RS13980 17ad8c31ce256f10ce605389c1bf2cef 442 PANTHER PTHR10515:SF0 5 441 7.9E-217 T 21-04-2016 VFU_RS13980 17ad8c31ce256f10ce605389c1bf2cef 442 SUPERFAMILY SSF47648 2 70 1.13E-21 T 21-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain VFU_RS13980 17ad8c31ce256f10ce605389c1bf2cef 442 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 423 1.3E-160 T 21-04-2016 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 VFU_RS13980 17ad8c31ce256f10ce605389c1bf2cef 442 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 3 427 7.8E-214 T 21-04-2016 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 VFU_RS13980 17ad8c31ce256f10ce605389c1bf2cef 442 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 21-04-2016 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 VFU_RS13980 17ad8c31ce256f10ce605389c1bf2cef 442 SMART SM00941 350 424 3.4E-28 T 21-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 VFU_RS13980 17ad8c31ce256f10ce605389c1bf2cef 442 Gene3D G3DSA:3.40.1030.10 75 338 1.4E-109 T 21-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 VFU_RS13980 17ad8c31ce256f10ce605389c1bf2cef 442 Pfam PF00591 Glycosyl transferase family, a/b domain 80 309 3.6E-49 T 21-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 VFU_RS13980 17ad8c31ce256f10ce605389c1bf2cef 442 SUPERFAMILY SSF52418 73 333 3.53E-88 T 21-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 VFU_RS13980 17ad8c31ce256f10ce605389c1bf2cef 442 Hamap MF_01628 Thymidine phosphorylase [deoA]. 1 438 51.097 T 21-04-2016 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 VFU_RS13980 17ad8c31ce256f10ce605389c1bf2cef 442 Gene3D G3DSA:1.20.970.10 2 67 1.1E-29 T 21-04-2016 VFU_RS13980 17ad8c31ce256f10ce605389c1bf2cef 442 PANTHER PTHR10515 5 441 7.9E-217 T 21-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 VFU_RS13980 17ad8c31ce256f10ce605389c1bf2cef 442 PIRSF PIRSF000478 1 438 4.6E-150 T 21-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 VFU_RS02370 8c3ca907c82a2343c36ead518b33c645 285 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS02370 8c3ca907c82a2343c36ead518b33c645 285 PANTHER PTHR30376 2 285 1.0E-126 T 21-04-2016 VFU_RS02370 8c3ca907c82a2343c36ead518b33c645 285 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 281 3.3E-35 T 21-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS02370 8c3ca907c82a2343c36ead518b33c645 285 Pfam PF04542 Sigma-70 region 2 53 122 2.9E-17 T 21-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS02370 8c3ca907c82a2343c36ead518b33c645 285 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 284 53.498 T 21-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 VFU_RS02370 8c3ca907c82a2343c36ead518b33c645 285 SUPERFAMILY SSF88946 11 122 8.63E-41 T 21-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS02370 8c3ca907c82a2343c36ead518b33c645 285 Pfam PF00140 Sigma-70 factor, region 1.2 14 40 6.5E-8 T 21-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS02370 8c3ca907c82a2343c36ead518b33c645 285 SUPERFAMILY SSF88659 198 282 1.05E-19 T 21-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS02370 8c3ca907c82a2343c36ead518b33c645 285 Pfam PF04545 Sigma-70, region 4 229 279 2.2E-16 T 21-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS02370 8c3ca907c82a2343c36ead518b33c645 285 Gene3D G3DSA:1.10.10.10 224 281 2.7E-20 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS02370 8c3ca907c82a2343c36ead518b33c645 285 PRINTS PR00046 Major sigma-70 factor signature 233 245 1.4E-18 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS02370 8c3ca907c82a2343c36ead518b33c645 285 PRINTS PR00046 Major sigma-70 factor signature 267 278 1.4E-18 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS02370 8c3ca907c82a2343c36ead518b33c645 285 PRINTS PR00046 Major sigma-70 factor signature 77 90 1.4E-18 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS02370 8c3ca907c82a2343c36ead518b33c645 285 PRINTS PR00046 Major sigma-70 factor signature 252 267 1.4E-18 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS02370 8c3ca907c82a2343c36ead518b33c645 285 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 252 278 - T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS02370 8c3ca907c82a2343c36ead518b33c645 285 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 15 282 1.7E-126 T 21-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 VFU_RS02370 8c3ca907c82a2343c36ead518b33c645 285 Gene3D G3DSA:1.10.601.10 13 122 1.3E-34 T 21-04-2016 VFU_RS12020 ebf70bd07bfa7b1999fa36070e349f7d 233 SUPERFAMILY SSF53067 4 108 4.75E-32 T 21-04-2016 VFU_RS12020 ebf70bd07bfa7b1999fa36070e349f7d 233 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 221 5.1E-69 T 21-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 VFU_RS12020 ebf70bd07bfa7b1999fa36070e349f7d 233 SUPERFAMILY SSF53067 112 219 1.29E-27 T 21-04-2016 VFU_RS12020 ebf70bd07bfa7b1999fa36070e349f7d 233 PANTHER PTHR11735:SF11 1 138 2.3E-59 T 21-04-2016 VFU_RS12020 ebf70bd07bfa7b1999fa36070e349f7d 233 Pfam PF00814 Glycoprotease family 30 152 1.2E-31 T 21-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VFU_RS12020 ebf70bd07bfa7b1999fa36070e349f7d 233 PANTHER PTHR11735 1 138 2.3E-59 T 21-04-2016 VFU_RS12020 ebf70bd07bfa7b1999fa36070e349f7d 233 Gene3D G3DSA:3.30.420.40 4 133 1.6E-46 T 21-04-2016 VFU_RS04760 77fc64ff35a11831481b9d8e0c492748 748 Gene3D G3DSA:3.20.20.60 421 736 7.1E-96 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VFU_RS04760 77fc64ff35a11831481b9d8e0c492748 748 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 612 630 - T 21-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 VFU_RS04760 77fc64ff35a11831481b9d8e0c492748 748 Pfam PF01590 GAF domain 20 152 2.5E-13 T 21-04-2016 IPR003018 GAF domain GO:0005515 VFU_RS04760 77fc64ff35a11831481b9d8e0c492748 748 SMART SM00065 17 163 7.7E-20 T 21-04-2016 IPR003018 GAF domain GO:0005515 VFU_RS04760 77fc64ff35a11831481b9d8e0c492748 748 Gene3D G3DSA:3.30.450.40 1 159 3.8E-44 T 21-04-2016 IPR029016 GAF domain-like VFU_RS04760 77fc64ff35a11831481b9d8e0c492748 748 SUPERFAMILY SSF47831 197 311 2.48E-27 T 21-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VFU_RS04760 77fc64ff35a11831481b9d8e0c492748 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 1.6E-22 T 21-04-2016 VFU_RS04760 77fc64ff35a11831481b9d8e0c492748 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 612 627 1.6E-22 T 21-04-2016 VFU_RS04760 77fc64ff35a11831481b9d8e0c492748 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 629 644 1.6E-22 T 21-04-2016 VFU_RS04760 77fc64ff35a11831481b9d8e0c492748 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 665 677 1.6E-22 T 21-04-2016 VFU_RS04760 77fc64ff35a11831481b9d8e0c492748 748 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 423 706 3.2E-92 T 21-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 VFU_RS04760 77fc64ff35a11831481b9d8e0c492748 748 PANTHER PTHR22931:SF23 181 715 8.9E-298 T 21-04-2016 VFU_RS04760 77fc64ff35a11831481b9d8e0c492748 748 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 351 362 - T 21-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 VFU_RS04760 77fc64ff35a11831481b9d8e0c492748 748 Gene3D G3DSA:1.10.274.10 196 301 2.0E-32 T 21-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VFU_RS04760 77fc64ff35a11831481b9d8e0c492748 748 Gene3D G3DSA:3.50.30.10 302 418 1.4E-28 T 21-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VFU_RS04760 77fc64ff35a11831481b9d8e0c492748 748 Pfam PF00391 PEP-utilising enzyme, mobile domain 319 391 3.0E-16 T 21-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VFU_RS04760 77fc64ff35a11831481b9d8e0c492748 748 SUPERFAMILY SSF55781 2 158 1.11E-31 T 21-04-2016 IPR029016 GAF domain-like VFU_RS04760 77fc64ff35a11831481b9d8e0c492748 748 PANTHER PTHR22931 181 715 8.9E-298 T 21-04-2016 VFU_RS04760 77fc64ff35a11831481b9d8e0c492748 748 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 171 723 7.1E-137 T 21-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 VFU_RS04760 77fc64ff35a11831481b9d8e0c492748 748 SUPERFAMILY SSF51621 419 714 4.71E-95 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VFU_RS04760 77fc64ff35a11831481b9d8e0c492748 748 Pfam PF05524 PEP-utilising enzyme, N-terminal 173 294 4.0E-25 T 21-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VFU_RS04760 77fc64ff35a11831481b9d8e0c492748 748 SUPERFAMILY SSF52009 293 413 6.67E-26 T 21-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VFU_RS00940 81eb01d88455d65eeb8141d1b0811b52 454 SUPERFAMILY SSF56954 7 436 2.35E-46 T 21-04-2016 VFU_RS00940 81eb01d88455d65eeb8141d1b0811b52 454 Gene3D G3DSA:1.20.1600.10 37 436 3.5E-32 T 21-04-2016 VFU_RS00940 81eb01d88455d65eeb8141d1b0811b52 454 Pfam PF02321 Outer membrane efflux protein 258 437 1.3E-19 T 21-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VFU_RS00940 81eb01d88455d65eeb8141d1b0811b52 454 Pfam PF02321 Outer membrane efflux protein 41 222 5.1E-6 T 21-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VFU_RS11915 26a4299b0af788805bc4b9e1ebceadc6 208 Pfam PF00072 Response regulator receiver domain 4 116 2.1E-26 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS11915 26a4299b0af788805bc4b9e1ebceadc6 208 PANTHER PTHR26402:SF612 2 201 8.4E-134 T 21-04-2016 VFU_RS11915 26a4299b0af788805bc4b9e1ebceadc6 208 Gene3D G3DSA:1.10.10.10 150 204 2.8E-22 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS11915 26a4299b0af788805bc4b9e1ebceadc6 208 SUPERFAMILY SSF52172 1 125 6.69E-29 T 21-04-2016 IPR011006 CheY-like superfamily VFU_RS11915 26a4299b0af788805bc4b9e1ebceadc6 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 175 6.0E-12 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VFU_RS11915 26a4299b0af788805bc4b9e1ebceadc6 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 187 6.0E-12 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VFU_RS11915 26a4299b0af788805bc4b9e1ebceadc6 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 145 159 6.0E-12 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VFU_RS11915 26a4299b0af788805bc4b9e1ebceadc6 208 ProSitePatterns PS00622 LuxR-type HTH domain signature. 159 186 - T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VFU_RS11915 26a4299b0af788805bc4b9e1ebceadc6 208 SMART SM00448 2 115 4.3E-24 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS11915 26a4299b0af788805bc4b9e1ebceadc6 208 SMART SM00421 142 199 3.2E-21 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VFU_RS11915 26a4299b0af788805bc4b9e1ebceadc6 208 SUPERFAMILY SSF46894 135 205 1.97E-20 T 21-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VFU_RS11915 26a4299b0af788805bc4b9e1ebceadc6 208 Gene3D G3DSA:3.40.50.2300 1 149 2.4E-33 T 21-04-2016 VFU_RS11915 26a4299b0af788805bc4b9e1ebceadc6 208 PANTHER PTHR26402 2 201 8.4E-134 T 21-04-2016 VFU_RS11915 26a4299b0af788805bc4b9e1ebceadc6 208 Pfam PF00196 Bacterial regulatory proteins, luxR family 145 199 2.1E-20 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VFU_RS07140 de7c0fe1afad329d762749870a2f48e7 536 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 529 50.618 T 21-04-2016 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 VFU_RS07140 de7c0fe1afad329d762749870a2f48e7 536 SMART SM00490 257 338 2.4E-31 T 21-04-2016 IPR001650 Helicase, C-terminal VFU_RS07140 de7c0fe1afad329d762749870a2f48e7 536 PANTHER PTHR24031 1 535 5.4E-204 T 21-04-2016 VFU_RS07140 de7c0fe1afad329d762749870a2f48e7 536 Pfam PF00271 Helicase conserved C-terminal domain 232 338 3.1E-26 T 21-04-2016 IPR001650 Helicase, C-terminal VFU_RS07140 de7c0fe1afad329d762749870a2f48e7 536 SUPERFAMILY SSF52540 73 353 1.95E-73 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS07140 de7c0fe1afad329d762749870a2f48e7 536 PANTHER PTHR24031:SF0 1 535 5.4E-204 T 21-04-2016 VFU_RS07140 de7c0fe1afad329d762749870a2f48e7 536 Gene3D G3DSA:3.40.50.300 2 217 8.0E-81 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS07140 de7c0fe1afad329d762749870a2f48e7 536 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 21-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VFU_RS07140 de7c0fe1afad329d762749870a2f48e7 536 SMART SM00487 20 219 6.8E-59 T 21-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VFU_RS07140 de7c0fe1afad329d762749870a2f48e7 536 Gene3D G3DSA:3.40.50.300 218 378 4.0E-49 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS07140 de7c0fe1afad329d762749870a2f48e7 536 Pfam PF00270 DEAD/DEAH box helicase 26 193 2.2E-46 T 21-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VFU_RS02065 7abd2b485aad28fe071374955b492145 504 ProSitePatterns PS00211 ABC transporters family signature. 400 414 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS02065 7abd2b485aad28fe071374955b492145 504 SMART SM00382 32 220 8.1E-8 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS02065 7abd2b485aad28fe071374955b492145 504 SMART SM00382 281 476 1.8E-5 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS02065 7abd2b485aad28fe071374955b492145 504 SUPERFAMILY SSF52540 8 226 2.93E-58 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS02065 7abd2b485aad28fe071374955b492145 504 PANTHER PTHR24220 9 381 2.6E-175 T 21-04-2016 VFU_RS02065 7abd2b485aad28fe071374955b492145 504 Gene3D G3DSA:3.40.50.300 274 491 2.5E-45 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS02065 7abd2b485aad28fe071374955b492145 504 Gene3D G3DSA:3.40.50.300 6 225 3.8E-62 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS02065 7abd2b485aad28fe071374955b492145 504 Pfam PF00005 ABC transporter 23 172 3.2E-33 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS02065 7abd2b485aad28fe071374955b492145 504 Pfam PF00005 ABC transporter 274 427 1.2E-17 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS02065 7abd2b485aad28fe071374955b492145 504 PANTHER PTHR24220:SF516 9 381 2.6E-175 T 21-04-2016 VFU_RS02065 7abd2b485aad28fe071374955b492145 504 SUPERFAMILY SSF52540 273 490 9.37E-44 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS03165 98e3a399d435b3d64fca12cfedd4c501 877 SUPERFAMILY SSF74853 41 131 1.15E-5 T 21-04-2016 IPR001322 Lamin Tail Domain VFU_RS03165 98e3a399d435b3d64fca12cfedd4c501 877 PANTHER PTHR33607 752 855 4.0E-196 T 21-04-2016 VFU_RS03165 98e3a399d435b3d64fca12cfedd4c501 877 PANTHER PTHR33607 505 727 4.0E-196 T 21-04-2016 VFU_RS03165 98e3a399d435b3d64fca12cfedd4c501 877 PANTHER PTHR33607 8 485 4.0E-196 T 21-04-2016 VFU_RS03165 98e3a399d435b3d64fca12cfedd4c501 877 Gene3D G3DSA:3.60.10.10 476 745 4.9E-22 T 21-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VFU_RS03165 98e3a399d435b3d64fca12cfedd4c501 877 Gene3D G3DSA:3.60.10.10 782 847 4.9E-22 T 21-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VFU_RS03165 98e3a399d435b3d64fca12cfedd4c501 877 SUPERFAMILY SSF56219 474 734 2.02E-29 T 21-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VFU_RS03165 98e3a399d435b3d64fca12cfedd4c501 877 SUPERFAMILY SSF56219 765 848 2.02E-29 T 21-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VFU_RS03165 98e3a399d435b3d64fca12cfedd4c501 877 PANTHER PTHR33607:SF1 752 855 4.0E-196 T 21-04-2016 VFU_RS03165 98e3a399d435b3d64fca12cfedd4c501 877 PANTHER PTHR33607:SF1 505 727 4.0E-196 T 21-04-2016 VFU_RS03165 98e3a399d435b3d64fca12cfedd4c501 877 PANTHER PTHR33607:SF1 8 485 4.0E-196 T 21-04-2016 VFU_RS03165 98e3a399d435b3d64fca12cfedd4c501 877 Pfam PF00932 Lamin Tail Domain 27 134 2.8E-13 T 21-04-2016 IPR001322 Lamin Tail Domain VFU_RS05115 6c705642f2e3a52ed03701c71cb9968c 332 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 26 293 5.4E-68 T 21-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 VFU_RS05115 6c705642f2e3a52ed03701c71cb9968c 332 SUPERFAMILY SSF53187 2 295 1.55E-76 T 21-04-2016 VFU_RS05115 6c705642f2e3a52ed03701c71cb9968c 332 Gene3D G3DSA:3.40.630.10 13 208 1.4E-26 T 21-04-2016 VFU_RS05115 6c705642f2e3a52ed03701c71cb9968c 332 PIRSF PIRSF039012 1 301 6.9E-91 T 21-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 VFU_RS05115 6c705642f2e3a52ed03701c71cb9968c 332 PANTHER PTHR37326 1 313 1.6E-116 T 21-04-2016 VFU_RS05115 6c705642f2e3a52ed03701c71cb9968c 332 PANTHER PTHR37326:SF1 1 313 1.6E-116 T 21-04-2016 VFU_RS05115 6c705642f2e3a52ed03701c71cb9968c 332 Gene3D G3DSA:2.40.50.100 228 289 8.0E-5 T 21-04-2016 VFU_RS02840 7ce0850f4495a600b51310002b4efadb 459 SUPERFAMILY SSF47384 228 304 9.61E-14 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS02840 7ce0850f4495a600b51310002b4efadb 459 SMART SM00387 349 459 1.5E-29 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS02840 7ce0850f4495a600b51310002b4efadb 459 Gene3D G3DSA:3.30.565.10 291 457 2.8E-35 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS02840 7ce0850f4495a600b51310002b4efadb 459 SUPERFAMILY SSF55874 295 457 2.23E-33 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS02840 7ce0850f4495a600b51310002b4efadb 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 412 1.9E-12 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS02840 7ce0850f4495a600b51310002b4efadb 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 398 1.9E-12 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS02840 7ce0850f4495a600b51310002b4efadb 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 1.9E-12 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS02840 7ce0850f4495a600b51310002b4efadb 459 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 351 458 5.9E-19 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS02840 7ce0850f4495a600b51310002b4efadb 459 PANTHER PTHR24423 11 57 1.8E-160 T 21-04-2016 VFU_RS02840 7ce0850f4495a600b51310002b4efadb 459 PANTHER PTHR24423 183 457 1.8E-160 T 21-04-2016 VFU_RS02840 7ce0850f4495a600b51310002b4efadb 459 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 36 167 7.9E-60 T 21-04-2016 IPR032404 Two-component sensor protein CpxA, periplasmic domain VFU_RS02840 7ce0850f4495a600b51310002b4efadb 459 Pfam PF00672 HAMP domain 172 238 5.0E-13 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS02840 7ce0850f4495a600b51310002b4efadb 459 Gene3D G3DSA:1.10.287.130 233 290 2.5E-15 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS02840 7ce0850f4495a600b51310002b4efadb 459 SMART SM00388 243 305 1.9E-11 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS02840 7ce0850f4495a600b51310002b4efadb 459 Pfam PF00512 His Kinase A (phospho-acceptor) domain 244 303 3.3E-11 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS02840 7ce0850f4495a600b51310002b4efadb 459 SMART SM00304 189 242 1.5E-8 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS02840 7ce0850f4495a600b51310002b4efadb 459 PANTHER PTHR24423:SF553 11 57 1.8E-160 T 21-04-2016 VFU_RS02840 7ce0850f4495a600b51310002b4efadb 459 PANTHER PTHR24423:SF553 183 457 1.8E-160 T 21-04-2016 VFU_RS06225 642cff5c8b3e980b8e06c9c78097a986 512 PANTHER PTHR11564:SF3 207 489 2.0E-94 T 21-04-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 VFU_RS06225 642cff5c8b3e980b8e06c9c78097a986 512 Gene3D G3DSA:3.40.50.300 298 489 4.0E-44 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS06225 642cff5c8b3e980b8e06c9c78097a986 512 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 2 387 3.5E-86 T 21-04-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 VFU_RS06225 642cff5c8b3e980b8e06c9c78097a986 512 Pfam PF00448 SRP54-type protein, GTPase domain 301 489 4.2E-38 T 21-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 VFU_RS06225 642cff5c8b3e980b8e06c9c78097a986 512 SMART SM00962 299 492 1.1E-64 T 21-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 VFU_RS06225 642cff5c8b3e980b8e06c9c78097a986 512 SUPERFAMILY SSF52540 295 487 7.82E-34 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS06225 642cff5c8b3e980b8e06c9c78097a986 512 PANTHER PTHR11564 207 489 2.0E-94 T 21-04-2016 VFU_RS06225 642cff5c8b3e980b8e06c9c78097a986 512 SMART SM00382 298 436 7.3E-7 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS05425 047f8b2b46385c1d1f4c7747a9bacc0f 192 PANTHER PTHR35562 1 184 7.7E-80 T 21-04-2016 VFU_RS05425 047f8b2b46385c1d1f4c7747a9bacc0f 192 SMART SM00463 91 174 7.9E-11 T 21-04-2016 IPR002625 Smr domain VFU_RS05425 047f8b2b46385c1d1f4c7747a9bacc0f 192 SUPERFAMILY SSF160443 92 174 2.88E-13 T 21-04-2016 IPR002625 Smr domain VFU_RS05425 047f8b2b46385c1d1f4c7747a9bacc0f 192 PANTHER PTHR35562:SF2 1 184 7.7E-80 T 21-04-2016 VFU_RS05425 047f8b2b46385c1d1f4c7747a9bacc0f 192 Pfam PF01713 Smr domain 94 174 8.2E-19 T 21-04-2016 IPR002625 Smr domain VFU_RS10120 52454669274c7ec6fcacea113b9a4e6c 313 PIRSF PIRSF000450 1 309 3.1E-148 T 21-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 VFU_RS10120 52454669274c7ec6fcacea113b9a4e6c 313 Gene3D G3DSA:3.40.50.880 34 301 3.7E-122 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like VFU_RS10120 52454669274c7ec6fcacea113b9a4e6c 313 PANTHER PTHR20919:SF0 2 313 3.4E-159 T 21-04-2016 VFU_RS10120 52454669274c7ec6fcacea113b9a4e6c 313 Hamap MF_00295 Homoserine O-succinyltransferase [metA]. 1 301 53.336 T 21-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 VFU_RS10120 52454669274c7ec6fcacea113b9a4e6c 313 SUPERFAMILY SSF52317 17 297 4.58E-102 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like VFU_RS10120 52454669274c7ec6fcacea113b9a4e6c 313 PANTHER PTHR20919 2 313 3.4E-159 T 21-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 VFU_RS10120 52454669274c7ec6fcacea113b9a4e6c 313 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 3.0E-127 T 21-04-2016 VFU_RS10120 52454669274c7ec6fcacea113b9a4e6c 313 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 302 5.9E-163 T 21-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 VFU_RS10120 52454669274c7ec6fcacea113b9a4e6c 313 Pfam PF04204 Homoserine O-succinyltransferase 2 299 3.5E-135 T 21-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 VFU_RS13730 769135ec3c05b0c55997baa6add8a9f7 143 SUPERFAMILY SSF82649 4 141 6.8E-48 T 21-04-2016 VFU_RS13730 769135ec3c05b0c55997baa6add8a9f7 143 PANTHER PTHR12735:SF11 6 140 9.9E-49 T 21-04-2016 VFU_RS13730 769135ec3c05b0c55997baa6add8a9f7 143 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 6 140 7.6E-45 T 21-04-2016 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE VFU_RS13730 769135ec3c05b0c55997baa6add8a9f7 143 Pfam PF02657 Fe-S metabolism associated domain 21 139 4.4E-45 T 21-04-2016 IPR003808 Fe-S metabolism associated domain, SufE-like UniPathway: UPA00266 VFU_RS13730 769135ec3c05b0c55997baa6add8a9f7 143 Gene3D G3DSA:3.90.1010.10 6 142 1.4E-52 T 21-04-2016 VFU_RS13730 769135ec3c05b0c55997baa6add8a9f7 143 PANTHER PTHR12735 6 140 9.9E-49 T 21-04-2016 VFU_RS00100 54303e8fa474347a0f52a681a55f3d2f 370 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 10 343 1.0E-152 T 21-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 VFU_RS00100 54303e8fa474347a0f52a681a55f3d2f 370 Pfam PF13484 4Fe-4S double cluster binding domain 188 252 3.5E-20 T 21-04-2016 VFU_RS00100 54303e8fa474347a0f52a681a55f3d2f 370 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 189 200 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VFU_RS00100 54303e8fa474347a0f52a681a55f3d2f 370 PANTHER PTHR30002:SF4 1 362 6.5E-195 T 21-04-2016 VFU_RS00100 54303e8fa474347a0f52a681a55f3d2f 370 SUPERFAMILY SSF54862 165 314 1.72E-21 T 21-04-2016 VFU_RS00100 54303e8fa474347a0f52a681a55f3d2f 370 PANTHER PTHR30002 1 362 6.5E-195 T 21-04-2016 VFU_RS00100 54303e8fa474347a0f52a681a55f3d2f 370 Gene3D G3DSA:3.30.70.20 186 253 1.5E-8 T 21-04-2016 VFU_RS00100 54303e8fa474347a0f52a681a55f3d2f 370 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 3 311 50.92 T 21-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 VFU_RS00100 54303e8fa474347a0f52a681a55f3d2f 370 Pfam PF08331 Domain of unknown function (DUF1730) 58 136 4.8E-24 T 21-04-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700|UniPathway: UPA00392 VFU_RS14055 323e3119f51c55f1b451094e92f43953 153 PIRSF PIRSF028680 1 153 1.8E-54 T 21-04-2016 IPR016895 Uncharacterised conserved protein UCP028680 VFU_RS07710 ea1a191eba9e80116e17978a46b18d4f 429 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 10 418 3.4E-177 T 21-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 VFU_RS07710 ea1a191eba9e80116e17978a46b18d4f 429 Pfam PF00202 Aminotransferase class-III 24 418 1.7E-129 T 21-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VFU_RS07710 ea1a191eba9e80116e17978a46b18d4f 429 Gene3D G3DSA:3.40.640.10 59 326 3.0E-93 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VFU_RS07710 ea1a191eba9e80116e17978a46b18d4f 429 Gene3D G3DSA:3.90.1150.10 3 58 1.1E-53 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VFU_RS07710 ea1a191eba9e80116e17978a46b18d4f 429 Gene3D G3DSA:3.90.1150.10 329 419 1.1E-53 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VFU_RS07710 ea1a191eba9e80116e17978a46b18d4f 429 PIRSF PIRSF000521 22 421 6.6E-39 T 21-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VFU_RS07710 ea1a191eba9e80116e17978a46b18d4f 429 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 421 47.823 T 21-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 VFU_RS07710 ea1a191eba9e80116e17978a46b18d4f 429 PANTHER PTHR11986:SF8 2 426 7.6E-201 T 21-04-2016 VFU_RS07710 ea1a191eba9e80116e17978a46b18d4f 429 SUPERFAMILY SSF53383 4 419 1.03E-132 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VFU_RS07710 ea1a191eba9e80116e17978a46b18d4f 429 PANTHER PTHR11986 2 426 7.6E-201 T 21-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VFU_RS07710 ea1a191eba9e80116e17978a46b18d4f 429 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 239 276 - T 21-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VFU_RS03690 3f1396caf3ce554478ea358f50abb1d3 129 PANTHER PTHR11803 1 128 1.7E-52 T 21-04-2016 IPR006175 YjgF/YER057c/UK114 family VFU_RS03690 3f1396caf3ce554478ea358f50abb1d3 129 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 104 122 - T 21-04-2016 IPR019897 RidA, conserved site VFU_RS03690 3f1396caf3ce554478ea358f50abb1d3 129 Pfam PF01042 Endoribonuclease L-PSP 8 127 1.9E-43 T 21-04-2016 IPR006175 YjgF/YER057c/UK114 family VFU_RS03690 3f1396caf3ce554478ea358f50abb1d3 129 Gene3D G3DSA:3.30.1330.40 5 128 4.4E-47 T 21-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like VFU_RS03690 3f1396caf3ce554478ea358f50abb1d3 129 SUPERFAMILY SSF55298 2 128 1.57E-44 T 21-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like VFU_RS03690 3f1396caf3ce554478ea358f50abb1d3 129 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 127 2.3E-52 T 21-04-2016 IPR006056 RidA family VFU_RS11610 3e5fd8aed265dfaee43fc1675cb213f3 228 PANTHER PTHR24220 6 222 5.9E-121 T 21-04-2016 VFU_RS11610 3e5fd8aed265dfaee43fc1675cb213f3 228 SUPERFAMILY SSF52540 4 226 5.58E-68 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS11610 3e5fd8aed265dfaee43fc1675cb213f3 228 PANTHER PTHR24220:SF111 6 222 5.9E-121 T 21-04-2016 VFU_RS11610 3e5fd8aed265dfaee43fc1675cb213f3 228 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS11610 3e5fd8aed265dfaee43fc1675cb213f3 228 Pfam PF00005 ABC transporter 24 172 6.9E-33 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS11610 3e5fd8aed265dfaee43fc1675cb213f3 228 Gene3D G3DSA:3.40.50.300 3 226 4.9E-65 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS11610 3e5fd8aed265dfaee43fc1675cb213f3 228 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 4 223 3.0E-108 T 21-04-2016 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 VFU_RS11610 3e5fd8aed265dfaee43fc1675cb213f3 228 SMART SM00382 33 221 2.8E-11 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS12350 ca7e0014970132f452796e8087c01aac 700 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 559 697 2.8E-49 T 21-04-2016 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS12350 ca7e0014970132f452796e8087c01aac 700 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 234 360 1.2E-30 T 21-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 VFU_RS12350 ca7e0014970132f452796e8087c01aac 700 Pfam PF13177 DNA polymerase III, delta subunit 20 178 3.5E-44 T 21-04-2016 VFU_RS12350 ca7e0014970132f452796e8087c01aac 700 PANTHER PTHR11669:SF0 1 432 9.6E-179 T 21-04-2016 VFU_RS12350 ca7e0014970132f452796e8087c01aac 700 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 483 557 3.5E-22 T 21-04-2016 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS12350 ca7e0014970132f452796e8087c01aac 700 Gene3D G3DSA:3.40.50.300 15 166 1.4E-66 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS12350 ca7e0014970132f452796e8087c01aac 700 Gene3D G3DSA:1.10.8.60 167 242 3.8E-32 T 21-04-2016 VFU_RS12350 ca7e0014970132f452796e8087c01aac 700 SUPERFAMILY SSF52540 32 222 1.0E-56 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS12350 ca7e0014970132f452796e8087c01aac 700 PANTHER PTHR11669 1 432 9.6E-179 T 21-04-2016 VFU_RS12350 ca7e0014970132f452796e8087c01aac 700 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 4.3E-133 T 21-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 VFU_RS12350 ca7e0014970132f452796e8087c01aac 700 SMART SM00382 37 179 9.5E-6 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS12350 ca7e0014970132f452796e8087c01aac 700 SUPERFAMILY SSF48019 243 361 2.47E-33 T 21-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 VFU_RS12350 ca7e0014970132f452796e8087c01aac 700 Gene3D G3DSA:1.20.272.10 243 360 3.1E-45 T 21-04-2016 VFU_RS00365 439ab0546151a73dad8a28d49fd9b82e 435 Gene3D G3DSA:3.40.50.300 224 382 1.5E-50 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS00365 439ab0546151a73dad8a28d49fd9b82e 435 SUPERFAMILY SSF52540 85 362 2.23E-71 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS00365 439ab0546151a73dad8a28d49fd9b82e 435 Pfam PF00271 Helicase conserved C-terminal domain 243 351 1.4E-30 T 21-04-2016 IPR001650 Helicase, C-terminal VFU_RS00365 439ab0546151a73dad8a28d49fd9b82e 435 Gene3D G3DSA:3.40.50.300 7 223 7.5E-74 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS00365 439ab0546151a73dad8a28d49fd9b82e 435 PANTHER PTHR24031 1 432 6.4E-281 T 21-04-2016 VFU_RS00365 439ab0546151a73dad8a28d49fd9b82e 435 PANTHER PTHR24031:SF173 1 432 6.4E-281 T 21-04-2016 VFU_RS00365 439ab0546151a73dad8a28d49fd9b82e 435 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 50.537 T 21-04-2016 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 VFU_RS00365 439ab0546151a73dad8a28d49fd9b82e 435 SMART SM00487 28 234 2.3E-54 T 21-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VFU_RS00365 439ab0546151a73dad8a28d49fd9b82e 435 Pfam PF00270 DEAD/DEAH box helicase 33 207 8.5E-45 T 21-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VFU_RS00365 439ab0546151a73dad8a28d49fd9b82e 435 SMART SM00490 270 351 3.8E-33 T 21-04-2016 IPR001650 Helicase, C-terminal VFU_RS00365 439ab0546151a73dad8a28d49fd9b82e 435 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 21-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VFU_RS01695 0a863328768c3c0f1054b66c32fd8501 382 Gene3D G3DSA:3.40.50.1970 1 166 1.9E-46 T 21-04-2016 VFU_RS01695 0a863328768c3c0f1054b66c32fd8501 382 SUPERFAMILY SSF56796 4 374 1.02E-103 T 21-04-2016 VFU_RS01695 0a863328768c3c0f1054b66c32fd8501 382 PANTHER PTHR11496 1 379 1.2E-143 T 21-04-2016 VFU_RS01695 0a863328768c3c0f1054b66c32fd8501 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 365 7.0E-104 T 21-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 VFU_RS01695 0a863328768c3c0f1054b66c32fd8501 382 Gene3D G3DSA:1.20.1090.10 168 374 2.3E-65 T 21-04-2016 VFU_RS01695 0a863328768c3c0f1054b66c32fd8501 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 155 183 - T 21-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VFU_RS01695 0a863328768c3c0f1054b66c32fd8501 382 PANTHER PTHR11496:SF71 1 379 1.2E-143 T 21-04-2016 VFU_RS01695 0a863328768c3c0f1054b66c32fd8501 382 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 242 262 - T 21-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VFU_RS07295 c239f668eb844f26165556b70f79fa29 345 Gene3D G3DSA:1.10.3470.10 16 340 9.4E-97 T 21-04-2016 IPR029022 ABC transporter, BtuC-like VFU_RS07295 c239f668eb844f26165556b70f79fa29 345 Pfam PF01032 FecCD transport family 29 339 7.2E-90 T 21-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 VFU_RS07295 c239f668eb844f26165556b70f79fa29 345 SUPERFAMILY SSF81345 10 339 2.35E-78 T 21-04-2016 IPR029022 ABC transporter, BtuC-like VFU_RS07295 c239f668eb844f26165556b70f79fa29 345 PANTHER PTHR30472 8 345 1.3E-154 T 21-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 VFU_RS07295 c239f668eb844f26165556b70f79fa29 345 PANTHER PTHR30472:SF31 8 345 1.3E-154 T 21-04-2016 VFU_RS01845 ddcbeffc46cf8dbfb417db8433cefdc9 207 Gene3D G3DSA:3.30.230.30 6 135 3.6E-43 T 21-04-2016 IPR001498 Impact, N-terminal VFU_RS01845 ddcbeffc46cf8dbfb417db8433cefdc9 207 PANTHER PTHR16301 1 207 5.7E-57 T 21-04-2016 IPR023582 Impact family VFU_RS01845 ddcbeffc46cf8dbfb417db8433cefdc9 207 Pfam PF01205 Uncharacterized protein family UPF0029 20 127 3.7E-25 T 21-04-2016 IPR001498 Impact, N-terminal VFU_RS01845 ddcbeffc46cf8dbfb417db8433cefdc9 207 SUPERFAMILY SSF54211 4 134 1.71E-43 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VFU_RS01845 ddcbeffc46cf8dbfb417db8433cefdc9 207 PANTHER PTHR16301:SF0 1 207 5.7E-57 T 21-04-2016 VFU_RS01845 ddcbeffc46cf8dbfb417db8433cefdc9 207 SUPERFAMILY SSF54980 139 203 1.38E-9 T 21-04-2016 IPR009022 Elongation factor G, III-V domain VFU_RS01845 ddcbeffc46cf8dbfb417db8433cefdc9 207 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 5 201 1.7E-63 T 21-04-2016 IPR015796 Impact family, bacterial/archaeal VFU_RS01845 ddcbeffc46cf8dbfb417db8433cefdc9 207 Pfam PF09186 Domain of unknown function (DUF1949) 143 196 1.2E-10 T 21-04-2016 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal VFU_RS01845 ddcbeffc46cf8dbfb417db8433cefdc9 207 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 82 111 - T 21-04-2016 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site VFU_RS01845 ddcbeffc46cf8dbfb417db8433cefdc9 207 Gene3D G3DSA:3.30.70.240 141 205 3.3E-11 T 21-04-2016 IPR000640 Translation elongation factor EFG, V domain VFU_RS04115 41bdfff24eac32edad9ae92c5ea43e91 241 TIGRFAM TIGR00613 reco: DNA repair protein RecO 7 230 1.5E-43 T 21-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 VFU_RS04115 41bdfff24eac32edad9ae92c5ea43e91 241 Pfam PF11967 Recombination protein O N terminal 5 77 7.3E-24 T 21-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal VFU_RS04115 41bdfff24eac32edad9ae92c5ea43e91 241 Gene3D G3DSA:2.40.50.140 7 76 3.6E-9 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS04115 41bdfff24eac32edad9ae92c5ea43e91 241 SUPERFAMILY SSF57863 86 165 1.96E-12 T 21-04-2016 VFU_RS04115 41bdfff24eac32edad9ae92c5ea43e91 241 PANTHER PTHR33991 2 241 5.2E-67 T 21-04-2016 VFU_RS04115 41bdfff24eac32edad9ae92c5ea43e91 241 SUPERFAMILY SSF50249 6 76 1.1E-15 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS04115 41bdfff24eac32edad9ae92c5ea43e91 241 Pfam PF02565 Recombination protein O C terminal 86 226 2.0E-24 T 21-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 VFU_RS04115 41bdfff24eac32edad9ae92c5ea43e91 241 Hamap MF_00201 DNA repair protein RecO [recO]. 2 231 23.25 T 21-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 VFU_RS14985 ce286cdbdb88c71e5f1c0c9e58297ae7 333 Gene3D G3DSA:3.40.718.10 2 328 1.1E-130 T 21-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 VFU_RS14985 ce286cdbdb88c71e5f1c0c9e58297ae7 333 SUPERFAMILY SSF53659 4 326 3.36E-111 T 21-04-2016 VFU_RS14985 ce286cdbdb88c71e5f1c0c9e58297ae7 333 PANTHER PTHR30004:SF5 1 329 4.8E-209 T 21-04-2016 VFU_RS14985 ce286cdbdb88c71e5f1c0c9e58297ae7 333 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 2 325 35.476 T 21-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 VFU_RS14985 ce286cdbdb88c71e5f1c0c9e58297ae7 333 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 5 324 1.6E-126 T 21-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 VFU_RS14985 ce286cdbdb88c71e5f1c0c9e58297ae7 333 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 32 321 1.5E-105 T 21-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 VFU_RS14985 ce286cdbdb88c71e5f1c0c9e58297ae7 333 PANTHER PTHR30004 1 329 4.8E-209 T 21-04-2016 VFU_RS02440 86fc2003c80b7c9dae3862ae3cd64346 369 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 11 368 4.0E-187 T 21-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 VFU_RS02440 86fc2003c80b7c9dae3862ae3cd64346 369 SUPERFAMILY SSF53335 10 367 1.0E-54 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS02440 86fc2003c80b7c9dae3862ae3cd64346 369 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 301 330 - T 21-04-2016 IPR030390 RNA methyltransferase TrmA, active site VFU_RS02440 86fc2003c80b7c9dae3862ae3cd64346 369 PANTHER PTHR11061:SF25 11 368 3.9E-226 T 21-04-2016 VFU_RS02440 86fc2003c80b7c9dae3862ae3cd64346 369 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 350 360 - T 21-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site VFU_RS02440 86fc2003c80b7c9dae3862ae3cd64346 369 Gene3D G3DSA:3.40.50.150 155 367 4.0E-45 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS02440 86fc2003c80b7c9dae3862ae3cd64346 369 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 368 44.649 T 21-04-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 VFU_RS02440 86fc2003c80b7c9dae3862ae3cd64346 369 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 11 368 4.3E-188 T 21-04-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 VFU_RS02440 86fc2003c80b7c9dae3862ae3cd64346 369 PANTHER PTHR11061 11 368 3.9E-226 T 21-04-2016 VFU_RS08885 1ac99c59f4493b95bf57ca76405c5346 418 PANTHER PTHR30349 21 275 2.0E-123 T 21-04-2016 VFU_RS08885 1ac99c59f4493b95bf57ca76405c5346 418 SUPERFAMILY SSF54506 209 413 3.77E-76 T 21-04-2016 VFU_RS08885 1ac99c59f4493b95bf57ca76405c5346 418 SUPERFAMILY SSF54506 28 205 2.28E-68 T 21-04-2016 VFU_RS08885 1ac99c59f4493b95bf57ca76405c5346 418 Gene3D G3DSA:3.10.310.10 27 216 2.9E-89 T 21-04-2016 VFU_RS08885 1ac99c59f4493b95bf57ca76405c5346 418 Gene3D G3DSA:3.10.310.10 217 394 2.1E-79 T 21-04-2016 VFU_RS08885 1ac99c59f4493b95bf57ca76405c5346 418 PANTHER PTHR30349:SF21 21 275 2.0E-123 T 21-04-2016 VFU_RS08885 1ac99c59f4493b95bf57ca76405c5346 418 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 28 414 5.3E-227 T 21-04-2016 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 UniPathway: UPA00946 VFU_RS08885 1ac99c59f4493b95bf57ca76405c5346 418 Pfam PF04303 PrpF protein 29 411 6.4E-175 T 21-04-2016 IPR007400 PrpF protein VFU_RS17445 29b994eb3ff66a72740bce3ec8a21659 135 Pfam PF00005 ABC transporter 23 68 1.1E-6 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS17445 29b994eb3ff66a72740bce3ec8a21659 135 PANTHER PTHR24220 34 134 4.8E-21 T 21-04-2016 VFU_RS17445 29b994eb3ff66a72740bce3ec8a21659 135 Gene3D G3DSA:3.40.50.300 17 131 3.8E-30 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS17445 29b994eb3ff66a72740bce3ec8a21659 135 SUPERFAMILY SSF52540 15 130 1.05E-28 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS14800 2d4f0bae80cb0675e4043bc928007ede 384 PIRSF PIRSF000497 1 381 1.2E-174 T 21-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VFU_RS14800 2d4f0bae80cb0675e4043bc928007ede 384 Gene3D G3DSA:3.30.300.10 11 132 2.0E-49 T 21-04-2016 VFU_RS14800 2d4f0bae80cb0675e4043bc928007ede 384 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 58.968 T 21-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VFU_RS14800 2d4f0bae80cb0675e4043bc928007ede 384 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 2.0E-46 T 21-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VFU_RS14800 2d4f0bae80cb0675e4043bc928007ede 384 SUPERFAMILY SSF55973 3 109 2.94E-47 T 21-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VFU_RS14800 2d4f0bae80cb0675e4043bc928007ede 384 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 7.1E-43 T 21-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VFU_RS14800 2d4f0bae80cb0675e4043bc928007ede 384 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 379 1.5E-197 T 21-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VFU_RS14800 2d4f0bae80cb0675e4043bc928007ede 384 PANTHER PTHR11964 1 376 4.6E-279 T 21-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VFU_RS14800 2d4f0bae80cb0675e4043bc928007ede 384 SUPERFAMILY SSF55973 111 232 1.18E-52 T 21-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VFU_RS14800 2d4f0bae80cb0675e4043bc928007ede 384 Gene3D G3DSA:3.30.300.10 244 381 2.3E-69 T 21-04-2016 VFU_RS14800 2d4f0bae80cb0675e4043bc928007ede 384 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 21-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VFU_RS14800 2d4f0bae80cb0675e4043bc928007ede 384 Gene3D G3DSA:3.30.300.10 133 233 3.7E-44 T 21-04-2016 VFU_RS14800 2d4f0bae80cb0675e4043bc928007ede 384 SUPERFAMILY SSF55973 233 382 1.1E-69 T 21-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VFU_RS14800 2d4f0bae80cb0675e4043bc928007ede 384 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 369 2.0E-68 T 21-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VFU_RS14800 2d4f0bae80cb0675e4043bc928007ede 384 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 21-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VFU_RS08675 071a7353d3824214967689a8d6aba9f1 1135 SUPERFAMILY SSF103647 325 398 5.89E-8 T 21-04-2016 IPR028974 TSP type-3 repeat GO:0005509 VFU_RS08675 071a7353d3824214967689a8d6aba9f1 1135 Gene3D G3DSA:4.10.1080.10 239 319 1.1E-13 T 21-04-2016 IPR028974 TSP type-3 repeat GO:0005509 VFU_RS08675 071a7353d3824214967689a8d6aba9f1 1135 Gene3D G3DSA:4.10.1080.10 196 207 1.1E-13 T 21-04-2016 IPR028974 TSP type-3 repeat GO:0005509 VFU_RS08675 071a7353d3824214967689a8d6aba9f1 1135 Gene3D G3DSA:4.10.1080.10 320 398 3.0E-7 T 21-04-2016 IPR028974 TSP type-3 repeat GO:0005509 VFU_RS08675 071a7353d3824214967689a8d6aba9f1 1135 SUPERFAMILY SSF103647 232 327 8.76E-9 T 21-04-2016 IPR028974 TSP type-3 repeat GO:0005509 VFU_RS09395 0590d89bdd49b2299f8f73a55543ddfb 149 Pfam PF06303 Organiser of macrodomain of Terminus of chromosome 1 147 5.2E-71 T 21-04-2016 IPR009390 Macrodomain Ter protein, MatP GO:0043565 VFU_RS09395 0590d89bdd49b2299f8f73a55543ddfb 149 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 29.122 T 21-04-2016 IPR009390 Macrodomain Ter protein, MatP GO:0043565 VFU_RS09395 0590d89bdd49b2299f8f73a55543ddfb 149 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 134 4.0E-63 T 21-04-2016 IPR009390 Macrodomain Ter protein, MatP GO:0043565 VFU_RS10085 76430ed0bdf966c443f13bd8f02576ad 540 Gene3D G3DSA:1.10.287.130 311 378 2.7E-21 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS10085 76430ed0bdf966c443f13bd8f02576ad 540 Pfam PF00989 PAS fold 217 269 6.3E-6 T 21-04-2016 IPR013767 PAS fold GO:0006355 VFU_RS10085 76430ed0bdf966c443f13bd8f02576ad 540 Gene3D G3DSA:3.30.450.20 32 172 1.1E-45 T 21-04-2016 VFU_RS10085 76430ed0bdf966c443f13bd8f02576ad 540 Gene3D G3DSA:3.30.565.10 389 537 1.3E-19 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS10085 76430ed0bdf966c443f13bd8f02576ad 540 PANTHER PTHR24423:SF487 88 159 3.0E-109 T 21-04-2016 VFU_RS10085 76430ed0bdf966c443f13bd8f02576ad 540 PANTHER PTHR24423:SF487 192 538 3.0E-109 T 21-04-2016 VFU_RS10085 76430ed0bdf966c443f13bd8f02576ad 540 SUPERFAMILY SSF55890 323 409 6.41E-10 T 21-04-2016 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 VFU_RS10085 76430ed0bdf966c443f13bd8f02576ad 540 Gene3D G3DSA:3.30.450.20 220 310 2.6E-7 T 21-04-2016 VFU_RS10085 76430ed0bdf966c443f13bd8f02576ad 540 PANTHER PTHR24423 88 159 3.0E-109 T 21-04-2016 VFU_RS10085 76430ed0bdf966c443f13bd8f02576ad 540 PANTHER PTHR24423 192 538 3.0E-109 T 21-04-2016 VFU_RS10085 76430ed0bdf966c443f13bd8f02576ad 540 Pfam PF17203 Single cache domain 3 38 169 1.4E-18 T 21-04-2016 IPR033463 Single cache domain 3 VFU_RS10085 76430ed0bdf966c443f13bd8f02576ad 540 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 424 537 3.1E-13 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS10085 76430ed0bdf966c443f13bd8f02576ad 540 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 481 1.3E-7 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS10085 76430ed0bdf966c443f13bd8f02576ad 540 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 535 1.3E-7 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS10085 76430ed0bdf966c443f13bd8f02576ad 540 PRINTS PR00344 Bacterial sensor protein C-terminal signature 498 516 1.3E-7 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS10085 76430ed0bdf966c443f13bd8f02576ad 540 SMART SM00387 419 538 4.1E-13 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS10085 76430ed0bdf966c443f13bd8f02576ad 540 SUPERFAMILY SSF55874 404 535 2.1E-20 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS10085 76430ed0bdf966c443f13bd8f02576ad 540 SUPERFAMILY SSF55785 218 307 1.92E-10 T 21-04-2016 IPR000014 PAS domain VFU_RS10085 76430ed0bdf966c443f13bd8f02576ad 540 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 320 372 2.6E-9 T 21-04-2016 VFU_RS10085 76430ed0bdf966c443f13bd8f02576ad 540 SUPERFAMILY SSF103190 39 170 6.67E-36 T 21-04-2016 IPR029151 Periplasmic sensor domain-like VFU_RS13230 36b69278ae58d665787fd90a85ab4196 121 SUPERFAMILY SSF54523 1 104 8.63E-15 T 21-04-2016 VFU_RS13230 36b69278ae58d665787fd90a85ab4196 121 Gene3D G3DSA:3.30.700.10 1 91 1.2E-8 T 21-04-2016 VFU_RS13230 36b69278ae58d665787fd90a85ab4196 121 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 16 101 2.3E-15 T 21-04-2016 IPR031982 Type IV minor pilin ComP VFU_RS02705 41dc7ec918964033f0a12432ed79af69 435 SUPERFAMILY SSF55874 289 434 4.06E-35 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS02705 41dc7ec918964033f0a12432ed79af69 435 Pfam PF00672 HAMP domain 158 222 4.2E-14 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS02705 41dc7ec918964033f0a12432ed79af69 435 SMART SM00387 326 435 2.5E-29 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS02705 41dc7ec918964033f0a12432ed79af69 435 SUPERFAMILY SSF158472 176 222 9.68E-5 T 21-04-2016 VFU_RS02705 41dc7ec918964033f0a12432ed79af69 435 Gene3D G3DSA:3.30.565.10 289 434 1.2E-34 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS02705 41dc7ec918964033f0a12432ed79af69 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 391 2.4E-12 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS02705 41dc7ec918964033f0a12432ed79af69 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 414 2.4E-12 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS02705 41dc7ec918964033f0a12432ed79af69 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 363 377 2.4E-12 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS02705 41dc7ec918964033f0a12432ed79af69 435 SMART SM00388 227 287 1.7E-9 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS02705 41dc7ec918964033f0a12432ed79af69 435 SMART SM00304 174 226 4.4E-10 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS02705 41dc7ec918964033f0a12432ed79af69 435 SUPERFAMILY SSF47384 221 282 1.51E-11 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS02705 41dc7ec918964033f0a12432ed79af69 435 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 327 433 2.1E-20 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS02705 41dc7ec918964033f0a12432ed79af69 435 Pfam PF00512 His Kinase A (phospho-acceptor) domain 230 281 3.2E-9 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS02705 41dc7ec918964033f0a12432ed79af69 435 PANTHER PTHR24423 168 433 4.3E-62 T 21-04-2016 VFU_RS02705 41dc7ec918964033f0a12432ed79af69 435 Gene3D G3DSA:1.10.287.130 218 281 1.4E-18 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS02775 de8037b3656ee1eb8c5a8fa332133b65 161 Pfam PF02863 Arginine repressor, C-terminal domain 93 151 6.2E-18 T 21-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 VFU_RS02775 de8037b3656ee1eb8c5a8fa332133b65 161 SUPERFAMILY SSF46785 13 81 3.7E-18 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS02775 de8037b3656ee1eb8c5a8fa332133b65 161 SUPERFAMILY SSF55252 91 155 1.44E-16 T 21-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 VFU_RS02775 de8037b3656ee1eb8c5a8fa332133b65 161 PANTHER PTHR34471:SF1 9 155 4.9E-34 T 21-04-2016 VFU_RS02775 de8037b3656ee1eb8c5a8fa332133b65 161 Pfam PF01316 Arginine repressor, DNA binding domain 18 80 2.1E-14 T 21-04-2016 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 UniPathway: UPA00068 VFU_RS02775 de8037b3656ee1eb8c5a8fa332133b65 161 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 96 136 3.0E-14 T 21-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 VFU_RS02775 de8037b3656ee1eb8c5a8fa332133b65 161 Hamap MF_00173 Arginine repressor [argR]. 1 161 40.923 T 21-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 VFU_RS02775 de8037b3656ee1eb8c5a8fa332133b65 161 Gene3D G3DSA:3.30.1360.40 84 154 3.1E-21 T 21-04-2016 IPR024946 Arginine repressor C-terminal-like domain VFU_RS02775 de8037b3656ee1eb8c5a8fa332133b65 161 PANTHER PTHR34471 9 155 4.9E-34 T 21-04-2016 VFU_RS02775 de8037b3656ee1eb8c5a8fa332133b65 161 Gene3D G3DSA:1.10.10.10 13 83 8.0E-27 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS02775 de8037b3656ee1eb8c5a8fa332133b65 161 PRINTS PR01467 Bacterial arginine repressor signature 49 64 2.7E-19 T 21-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 VFU_RS02775 de8037b3656ee1eb8c5a8fa332133b65 161 PRINTS PR01467 Bacterial arginine repressor signature 32 45 2.7E-19 T 21-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 VFU_RS02775 de8037b3656ee1eb8c5a8fa332133b65 161 PRINTS PR01467 Bacterial arginine repressor signature 97 110 2.7E-19 T 21-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 VFU_RS02775 de8037b3656ee1eb8c5a8fa332133b65 161 PRINTS PR01467 Bacterial arginine repressor signature 127 142 2.7E-19 T 21-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 VFU_RS07075 4b8dee9cec1c5af7ae6604e90a97a91c 509 SUPERFAMILY SSF53474 259 502 8.39E-41 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold VFU_RS07075 4b8dee9cec1c5af7ae6604e90a97a91c 509 SUPERFAMILY SSF81296 122 253 6.3E-22 T 21-04-2016 IPR014756 Immunoglobulin E-set VFU_RS07075 4b8dee9cec1c5af7ae6604e90a97a91c 509 Pfam PF00756 Putative esterase 275 501 2.4E-28 T 21-04-2016 IPR000801 Putative esterase VFU_RS07075 4b8dee9cec1c5af7ae6604e90a97a91c 509 Gene3D G3DSA:2.60.40.10 116 235 8.8E-20 T 21-04-2016 IPR013783 Immunoglobulin-like fold VFU_RS07075 4b8dee9cec1c5af7ae6604e90a97a91c 509 PANTHER PTHR10907 177 461 5.6E-48 T 21-04-2016 VFU_RS07075 4b8dee9cec1c5af7ae6604e90a97a91c 509 PANTHER PTHR10907:SF55 177 461 5.6E-48 T 21-04-2016 VFU_RS07075 4b8dee9cec1c5af7ae6604e90a97a91c 509 Pfam PF11806 Domain of unknown function (DUF3327) 149 255 9.1E-11 T 21-04-2016 IPR021764 Enterochelin esterase, N-terminal GO:0005506|GO:0005737|GO:0006826|GO:0008849 VFU_RS07075 4b8dee9cec1c5af7ae6604e90a97a91c 509 Gene3D G3DSA:3.40.50.1820 250 506 3.6E-58 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold VFU_RS13660 17e599475af0dae6912768fd21441332 317 SUPERFAMILY SSF53850 31 313 3.1E-64 T 21-04-2016 VFU_RS13660 17e599475af0dae6912768fd21441332 317 Gene3D G3DSA:3.40.190.10 260 310 7.2E-8 T 21-04-2016 VFU_RS13660 17e599475af0dae6912768fd21441332 317 Gene3D G3DSA:3.40.190.10 36 114 7.2E-8 T 21-04-2016 VFU_RS13660 17e599475af0dae6912768fd21441332 317 Gene3D G3DSA:3.40.190.10 117 259 1.2E-33 T 21-04-2016 VFU_RS13660 17e599475af0dae6912768fd21441332 317 Pfam PF12849 PBP superfamily domain 29 288 1.4E-27 T 21-04-2016 IPR024370 PBP domain VFU_RS13660 17e599475af0dae6912768fd21441332 317 PANTHER PTHR30570:SF5 33 317 2.7E-160 T 21-04-2016 VFU_RS13660 17e599475af0dae6912768fd21441332 317 PANTHER PTHR30570 33 317 2.7E-160 T 21-04-2016 VFU_RS13660 17e599475af0dae6912768fd21441332 317 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 5 301 4.1E-75 T 21-04-2016 IPR011862 Phosphate binding protein GO:0006810 VFU_RS08335 5ce35dcd530729197084da9a4110afb8 454 Gene3D G3DSA:1.10.275.10 8 107 8.3E-32 T 21-04-2016 IPR024083 Fumarase/histidase, N-terminal VFU_RS08335 5ce35dcd530729197084da9a4110afb8 454 PANTHER PTHR11444 5 444 5.1E-94 T 21-04-2016 IPR000362 Fumarate lyase family VFU_RS08335 5ce35dcd530729197084da9a4110afb8 454 PANTHER PTHR11444:SF21 5 444 5.1E-94 T 21-04-2016 VFU_RS08335 5ce35dcd530729197084da9a4110afb8 454 Pfam PF00206 Lyase 22 296 2.8E-37 T 21-04-2016 IPR022761 Fumarate lyase, N-terminal VFU_RS08335 5ce35dcd530729197084da9a4110afb8 454 ProSitePatterns PS00163 Fumarate lyases signature. 278 287 - T 21-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 VFU_RS08335 5ce35dcd530729197084da9a4110afb8 454 SUPERFAMILY SSF48557 13 449 8.8E-88 T 21-04-2016 IPR008948 L-Aspartase-like GO:0003824 VFU_RS08335 5ce35dcd530729197084da9a4110afb8 454 Pfam PF10397 Adenylosuccinate lyase C-terminus 368 442 8.4E-14 T 21-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 VFU_RS08335 5ce35dcd530729197084da9a4110afb8 454 Gene3D G3DSA:1.10.40.30 374 443 1.4E-17 T 21-04-2016 VFU_RS08335 5ce35dcd530729197084da9a4110afb8 454 PRINTS PR00149 Fumarate lyase superfamily signature 150 168 2.9E-17 T 21-04-2016 IPR000362 Fumarate lyase family VFU_RS08335 5ce35dcd530729197084da9a4110afb8 454 PRINTS PR00149 Fumarate lyase superfamily signature 235 262 2.9E-17 T 21-04-2016 IPR000362 Fumarate lyase family VFU_RS08335 5ce35dcd530729197084da9a4110afb8 454 PRINTS PR00149 Fumarate lyase superfamily signature 278 294 2.9E-17 T 21-04-2016 IPR000362 Fumarate lyase family VFU_RS08335 5ce35dcd530729197084da9a4110afb8 454 PRINTS PR00149 Fumarate lyase superfamily signature 105 123 2.9E-17 T 21-04-2016 IPR000362 Fumarate lyase family VFU_RS08335 5ce35dcd530729197084da9a4110afb8 454 SMART SM00998 366 444 9.2E-17 T 21-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 VFU_RS08335 5ce35dcd530729197084da9a4110afb8 454 PRINTS PR00145 Argininosuccinate lyase family signature 235 259 1.2E-6 T 21-04-2016 VFU_RS08335 5ce35dcd530729197084da9a4110afb8 454 PRINTS PR00145 Argininosuccinate lyase family signature 278 294 1.2E-6 T 21-04-2016 VFU_RS08335 5ce35dcd530729197084da9a4110afb8 454 PRINTS PR00145 Argininosuccinate lyase family signature 104 126 1.2E-6 T 21-04-2016 VFU_RS08335 5ce35dcd530729197084da9a4110afb8 454 PRINTS PR00145 Argininosuccinate lyase family signature 145 165 1.2E-6 T 21-04-2016 VFU_RS08335 5ce35dcd530729197084da9a4110afb8 454 Gene3D G3DSA:1.20.200.10 108 373 5.1E-61 T 21-04-2016 VFU_RS11235 1de8e6938ede28c0c948dbb80e83c8e5 88 PANTHER PTHR10168:SF85 1 81 9.2E-44 T 21-04-2016 VFU_RS11235 1de8e6938ede28c0c948dbb80e83c8e5 88 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 85 8.7E-49 T 21-04-2016 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 VFU_RS11235 1de8e6938ede28c0c948dbb80e83c8e5 88 Pfam PF00462 Glutaredoxin 3 69 9.4E-16 T 21-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VFU_RS11235 1de8e6938ede28c0c948dbb80e83c8e5 88 SUPERFAMILY SSF52833 3 81 3.52E-20 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS11235 1de8e6938ede28c0c948dbb80e83c8e5 88 PANTHER PTHR10168 1 81 9.2E-44 T 21-04-2016 VFU_RS11235 1de8e6938ede28c0c948dbb80e83c8e5 88 PRINTS PR00160 Glutaredoxin signature 66 79 1.4E-10 T 21-04-2016 IPR014025 Glutaredoxin subgroup VFU_RS11235 1de8e6938ede28c0c948dbb80e83c8e5 88 PRINTS PR00160 Glutaredoxin signature 3 21 1.4E-10 T 21-04-2016 IPR014025 Glutaredoxin subgroup VFU_RS11235 1de8e6938ede28c0c948dbb80e83c8e5 88 PRINTS PR00160 Glutaredoxin signature 52 65 1.4E-10 T 21-04-2016 IPR014025 Glutaredoxin subgroup VFU_RS11235 1de8e6938ede28c0c948dbb80e83c8e5 88 Gene3D G3DSA:3.40.30.10 2 81 2.4E-25 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS04040 d01d60862ea9856694cc4dd468eb8ffe 409 Pfam PF01494 FAD binding domain 5 348 4.2E-25 T 21-04-2016 IPR002938 FAD-binding domain GO:0071949 VFU_RS04040 d01d60862ea9856694cc4dd468eb8ffe 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 6.1E-19 T 21-04-2016 VFU_RS04040 d01d60862ea9856694cc4dd468eb8ffe 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 6.1E-19 T 21-04-2016 VFU_RS04040 d01d60862ea9856694cc4dd468eb8ffe 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 6.1E-19 T 21-04-2016 VFU_RS04040 d01d60862ea9856694cc4dd468eb8ffe 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 6.1E-19 T 21-04-2016 VFU_RS04040 d01d60862ea9856694cc4dd468eb8ffe 409 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 21-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 VFU_RS04040 d01d60862ea9856694cc4dd468eb8ffe 409 SUPERFAMILY SSF51905 268 385 9.33E-58 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS04040 d01d60862ea9856694cc4dd468eb8ffe 409 SUPERFAMILY SSF51905 5 177 9.33E-58 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS04040 d01d60862ea9856694cc4dd468eb8ffe 409 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 391 3.2E-135 T 21-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 VFU_RS04040 d01d60862ea9856694cc4dd468eb8ffe 409 PANTHER PTHR13789 2 399 5.8E-161 T 21-04-2016 VFU_RS04040 d01d60862ea9856694cc4dd468eb8ffe 409 PANTHER PTHR13789:SF5 2 399 5.8E-161 T 21-04-2016 VFU_RS04040 d01d60862ea9856694cc4dd468eb8ffe 409 Gene3D G3DSA:3.50.50.60 4 182 3.9E-44 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS04040 d01d60862ea9856694cc4dd468eb8ffe 409 Gene3D G3DSA:3.50.50.60 269 357 3.9E-44 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS03280 987e2811ffae0c9aeeddf6e4e23fbe37 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.898 T 21-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 VFU_RS03280 987e2811ffae0c9aeeddf6e4e23fbe37 103 SUPERFAMILY SSF54999 5 101 1.7E-36 T 21-04-2016 IPR027486 Ribosomal protein S10 domain VFU_RS03280 987e2811ffae0c9aeeddf6e4e23fbe37 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 3.3E-18 T 21-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 VFU_RS03280 987e2811ffae0c9aeeddf6e4e23fbe37 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 3.3E-18 T 21-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 VFU_RS03280 987e2811ffae0c9aeeddf6e4e23fbe37 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 3.3E-18 T 21-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 VFU_RS03280 987e2811ffae0c9aeeddf6e4e23fbe37 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 8.0E-35 T 21-04-2016 IPR027486 Ribosomal protein S10 domain VFU_RS03280 987e2811ffae0c9aeeddf6e4e23fbe37 103 SMART SM01403 7 101 8.0E-56 T 21-04-2016 IPR027486 Ribosomal protein S10 domain VFU_RS03280 987e2811ffae0c9aeeddf6e4e23fbe37 103 Gene3D G3DSA:3.30.70.600 3 102 2.7E-43 T 21-04-2016 IPR027486 Ribosomal protein S10 domain VFU_RS03280 987e2811ffae0c9aeeddf6e4e23fbe37 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 21-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS03280 987e2811ffae0c9aeeddf6e4e23fbe37 103 PANTHER PTHR11700 1 102 1.5E-54 T 21-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 VFU_RS03280 987e2811ffae0c9aeeddf6e4e23fbe37 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.1E-45 T 21-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 VFU_RS03145 2c5c45f06bbc429b2451a7cfc3614d68 276 PANTHER PTHR30481 2 272 2.0E-120 T 21-04-2016 VFU_RS03145 2c5c45f06bbc429b2451a7cfc3614d68 276 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 268 1.2E-93 T 21-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VFU_RS03145 2c5c45f06bbc429b2451a7cfc3614d68 276 PANTHER PTHR30481:SF3 2 272 2.0E-120 T 21-04-2016 VFU_RS03145 2c5c45f06bbc429b2451a7cfc3614d68 276 SUPERFAMILY SSF53335 5 268 8.31E-73 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS03145 2c5c45f06bbc429b2451a7cfc3614d68 276 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 1.8E-17 T 21-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VFU_RS03145 2c5c45f06bbc429b2451a7cfc3614d68 276 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 1.8E-17 T 21-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VFU_RS03145 2c5c45f06bbc429b2451a7cfc3614d68 276 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 1.8E-17 T 21-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VFU_RS03145 2c5c45f06bbc429b2451a7cfc3614d68 276 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 1.8E-17 T 21-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VFU_RS03145 2c5c45f06bbc429b2451a7cfc3614d68 276 PIRSF PIRSF000398 1 275 3.9E-71 T 21-04-2016 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 VFU_RS03145 2c5c45f06bbc429b2451a7cfc3614d68 276 Gene3D G3DSA:1.10.1020.10 60 156 1.5E-33 T 21-04-2016 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 VFU_RS03145 2c5c45f06bbc429b2451a7cfc3614d68 276 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 21-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VFU_RS03145 2c5c45f06bbc429b2451a7cfc3614d68 276 Gene3D G3DSA:3.40.50.150 1 59 1.8E-50 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS03145 2c5c45f06bbc429b2451a7cfc3614d68 276 Gene3D G3DSA:3.40.50.150 160 267 1.8E-50 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS03145 2c5c45f06bbc429b2451a7cfc3614d68 276 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 252 2.8E-68 T 21-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VFU_RS14350 e53be272b0330e0bba15d568166ff35f 455 SMART SM00228 374 447 8.5E-8 T 21-04-2016 IPR001478 PDZ domain GO:0005515 VFU_RS14350 e53be272b0330e0bba15d568166ff35f 455 SMART SM00228 267 349 7.5E-18 T 21-04-2016 IPR001478 PDZ domain GO:0005515 VFU_RS14350 e53be272b0330e0bba15d568166ff35f 455 SUPERFAMILY SSF50494 37 263 6.63E-66 T 21-04-2016 IPR009003 Peptidase S1, PA clan VFU_RS14350 e53be272b0330e0bba15d568166ff35f 455 PANTHER PTHR22939:SF101 1 455 1.9E-208 T 21-04-2016 VFU_RS14350 e53be272b0330e0bba15d568166ff35f 455 Pfam PF13180 PDZ domain 269 358 3.4E-18 T 21-04-2016 IPR001478 PDZ domain GO:0005515 VFU_RS14350 e53be272b0330e0bba15d568166ff35f 455 PANTHER PTHR22939 1 455 1.9E-208 T 21-04-2016 VFU_RS14350 e53be272b0330e0bba15d568166ff35f 455 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 372 444 4.3E-9 T 21-04-2016 IPR001478 PDZ domain GO:0005515 VFU_RS14350 e53be272b0330e0bba15d568166ff35f 455 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 39 453 8.8E-167 T 21-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 VFU_RS14350 e53be272b0330e0bba15d568166ff35f 455 Gene3D G3DSA:2.40.10.10 37 155 1.5E-34 T 21-04-2016 VFU_RS14350 e53be272b0330e0bba15d568166ff35f 455 Gene3D G3DSA:2.30.42.10 387 454 4.0E-17 T 21-04-2016 IPR001478 PDZ domain GO:0005515 VFU_RS14350 e53be272b0330e0bba15d568166ff35f 455 SUPERFAMILY SSF50156 382 454 6.05E-15 T 21-04-2016 IPR001478 PDZ domain GO:0005515 VFU_RS14350 e53be272b0330e0bba15d568166ff35f 455 Gene3D G3DSA:2.40.10.10 156 269 8.6E-45 T 21-04-2016 VFU_RS14350 e53be272b0330e0bba15d568166ff35f 455 Gene3D G3DSA:2.30.42.10 270 365 6.5E-32 T 21-04-2016 IPR001478 PDZ domain GO:0005515 VFU_RS14350 e53be272b0330e0bba15d568166ff35f 455 Pfam PF13365 Trypsin-like peptidase domain 92 228 1.2E-31 T 21-04-2016 VFU_RS14350 e53be272b0330e0bba15d568166ff35f 455 PRINTS PR00834 HtrA/DegQ protease family signature 199 216 6.6E-58 T 21-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VFU_RS14350 e53be272b0330e0bba15d568166ff35f 455 PRINTS PR00834 HtrA/DegQ protease family signature 221 238 6.6E-58 T 21-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VFU_RS14350 e53be272b0330e0bba15d568166ff35f 455 PRINTS PR00834 HtrA/DegQ protease family signature 164 188 6.6E-58 T 21-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VFU_RS14350 e53be272b0330e0bba15d568166ff35f 455 PRINTS PR00834 HtrA/DegQ protease family signature 102 114 6.6E-58 T 21-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VFU_RS14350 e53be272b0330e0bba15d568166ff35f 455 PRINTS PR00834 HtrA/DegQ protease family signature 123 143 6.6E-58 T 21-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VFU_RS14350 e53be272b0330e0bba15d568166ff35f 455 PRINTS PR00834 HtrA/DegQ protease family signature 307 319 6.6E-58 T 21-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VFU_RS14350 e53be272b0330e0bba15d568166ff35f 455 SUPERFAMILY SSF50156 225 350 4.86E-28 T 21-04-2016 IPR001478 PDZ domain GO:0005515 VFU_RS04015 2a0c0455c1ec376e7eca50a84fdc0bed 218 SUPERFAMILY SSF100950 1 146 3.58E-47 T 21-04-2016 VFU_RS04015 2a0c0455c1ec376e7eca50a84fdc0bed 218 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 2.3E-57 T 21-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 VFU_RS04015 2a0c0455c1ec376e7eca50a84fdc0bed 218 Gene3D G3DSA:3.40.50.1360 1 136 3.7E-57 T 21-04-2016 VFU_RS04015 2a0c0455c1ec376e7eca50a84fdc0bed 218 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 214 4.9E-67 T 21-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 VFU_RS04015 2a0c0455c1ec376e7eca50a84fdc0bed 218 Gene3D G3DSA:3.30.70.260 137 196 4.8E-29 T 21-04-2016 VFU_RS04015 2a0c0455c1ec376e7eca50a84fdc0bed 218 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 33.491 T 21-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 VFU_RS04015 2a0c0455c1ec376e7eca50a84fdc0bed 218 PANTHER PTHR11934:SF11 1 218 1.4E-143 T 21-04-2016 VFU_RS04015 2a0c0455c1ec376e7eca50a84fdc0bed 218 PANTHER PTHR11934 1 218 1.4E-143 T 21-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 VFU_RS04015 2a0c0455c1ec376e7eca50a84fdc0bed 218 SUPERFAMILY SSF75445 127 198 1.57E-23 T 21-04-2016 VFU_RS08110 ec801e6910e1ae804e2551ed4cf00f76 301 Gene3D G3DSA:3.90.1640.10 2 174 1.4E-55 T 21-04-2016 VFU_RS08110 ec801e6910e1ae804e2551ed4cf00f76 301 PANTHER PTHR12112 1 301 7.6E-105 T 21-04-2016 VFU_RS08110 ec801e6910e1ae804e2551ed4cf00f76 301 SMART SM01131 178 300 2.2E-33 T 21-04-2016 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 VFU_RS08110 ec801e6910e1ae804e2551ed4cf00f76 301 Pfam PF02833 DHHA2 domain 181 297 6.6E-15 T 21-04-2016 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 VFU_RS08110 ec801e6910e1ae804e2551ed4cf00f76 301 Pfam PF01368 DHH family 2 142 1.4E-21 T 21-04-2016 IPR001667 DDH domain VFU_RS08110 ec801e6910e1ae804e2551ed4cf00f76 301 SUPERFAMILY SSF64182 1 298 5.49E-66 T 21-04-2016 VFU_RS08110 ec801e6910e1ae804e2551ed4cf00f76 301 PANTHER PTHR12112:SF17 1 301 7.6E-105 T 21-04-2016 VFU_RS12660 2dd0d625fadfd14bc066585fc728aafe 166 Pfam PF02357 Transcription termination factor nusG 2 94 1.6E-21 T 21-04-2016 IPR006645 NusG, N-terminal GO:0006355 VFU_RS12660 2dd0d625fadfd14bc066585fc728aafe 166 Gene3D G3DSA:3.30.70.940 1 99 4.0E-22 T 21-04-2016 IPR006645 NusG, N-terminal GO:0006355 VFU_RS12660 2dd0d625fadfd14bc066585fc728aafe 166 SUPERFAMILY SSF82679 1 100 5.1E-30 T 21-04-2016 IPR006645 NusG, N-terminal GO:0006355 VFU_RS12660 2dd0d625fadfd14bc066585fc728aafe 166 PANTHER PTHR30265:SF3 1 159 2.1E-46 T 21-04-2016 VFU_RS12660 2dd0d625fadfd14bc066585fc728aafe 166 SMART SM00738 1 101 1.7E-29 T 21-04-2016 IPR006645 NusG, N-terminal GO:0006355 VFU_RS12660 2dd0d625fadfd14bc066585fc728aafe 166 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 165 44.465 T 21-04-2016 IPR010215 Transcription antitermination protein RfaH GO:0006355 VFU_RS12660 2dd0d625fadfd14bc066585fc728aafe 166 PANTHER PTHR30265 1 159 2.1E-46 T 21-04-2016 VFU_RS12660 2dd0d625fadfd14bc066585fc728aafe 166 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 162 7.5E-63 T 21-04-2016 IPR010215 Transcription antitermination protein RfaH GO:0006355 VFU_RS03500 9e361c976137a7f765c435ad74394281 238 PANTHER PTHR24220 14 228 5.0E-78 T 21-04-2016 VFU_RS03500 9e361c976137a7f765c435ad74394281 238 SUPERFAMILY SSF52540 6 228 1.05E-50 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS03500 9e361c976137a7f765c435ad74394281 238 SMART SM00382 39 232 1.7E-10 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS03500 9e361c976137a7f765c435ad74394281 238 PANTHER PTHR24220:SF578 14 228 5.0E-78 T 21-04-2016 VFU_RS03500 9e361c976137a7f765c435ad74394281 238 Gene3D G3DSA:3.40.50.300 11 217 4.4E-54 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS03500 9e361c976137a7f765c435ad74394281 238 Pfam PF00005 ABC transporter 35 184 1.7E-26 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS14685 e749f2c17dc7a5dda152e42bf5641504 392 Pfam PF00155 Aminotransferase class I and II 35 384 4.7E-41 T 21-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VFU_RS14685 e749f2c17dc7a5dda152e42bf5641504 392 Gene3D G3DSA:3.40.640.10 46 251 5.6E-42 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VFU_RS14685 e749f2c17dc7a5dda152e42bf5641504 392 PANTHER PTHR11751:SF361 8 392 1.6E-157 T 21-04-2016 VFU_RS14685 e749f2c17dc7a5dda152e42bf5641504 392 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 7 389 1.9E-107 T 21-04-2016 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 VFU_RS14685 e749f2c17dc7a5dda152e42bf5641504 392 Gene3D G3DSA:3.90.1150.10 252 389 3.0E-34 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VFU_RS14685 e749f2c17dc7a5dda152e42bf5641504 392 SUPERFAMILY SSF53383 5 388 1.06E-79 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VFU_RS14685 e749f2c17dc7a5dda152e42bf5641504 392 PANTHER PTHR11751 8 392 1.6E-157 T 21-04-2016 VFU_RS10385 3cf96d27caf208d4448e3ebf4161be3b 437 Pfam PF01794 Ferric reductase like transmembrane component 37 165 9.1E-13 T 21-04-2016 IPR013130 Ferric reductase transmembrane component-like domain VFU_RS10385 3cf96d27caf208d4448e3ebf4161be3b 437 Gene3D G3DSA:2.40.30.10 214 308 9.3E-14 T 21-04-2016 VFU_RS10385 3cf96d27caf208d4448e3ebf4161be3b 437 SUPERFAMILY SSF52343 309 435 2.62E-24 T 21-04-2016 VFU_RS10385 3cf96d27caf208d4448e3ebf4161be3b 437 Gene3D G3DSA:3.40.50.80 315 435 4.9E-20 T 21-04-2016 VFU_RS10385 3cf96d27caf208d4448e3ebf4161be3b 437 PANTHER PTHR11972:SF23 36 436 5.6E-30 T 21-04-2016 VFU_RS10385 3cf96d27caf208d4448e3ebf4161be3b 437 PANTHER PTHR11972 36 436 5.6E-30 T 21-04-2016 VFU_RS10385 3cf96d27caf208d4448e3ebf4161be3b 437 SUPERFAMILY SSF63380 230 308 2.55E-13 T 21-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 VFU_RS10385 3cf96d27caf208d4448e3ebf4161be3b 437 Pfam PF00175 Oxidoreductase NAD-binding domain 319 414 1.0E-6 T 21-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VFU_RS06780 a0efc971e7549b2022dce22667530155 373 Pfam PF02119 Flagellar P-ring protein 31 372 1.9E-136 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VFU_RS06780 a0efc971e7549b2022dce22667530155 373 PRINTS PR01010 Flagellar P-ring protein signature 90 109 1.1E-77 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VFU_RS06780 a0efc971e7549b2022dce22667530155 373 PRINTS PR01010 Flagellar P-ring protein signature 260 272 1.1E-77 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VFU_RS06780 a0efc971e7549b2022dce22667530155 373 PRINTS PR01010 Flagellar P-ring protein signature 30 45 1.1E-77 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VFU_RS06780 a0efc971e7549b2022dce22667530155 373 PRINTS PR01010 Flagellar P-ring protein signature 64 79 1.1E-77 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VFU_RS06780 a0efc971e7549b2022dce22667530155 373 PRINTS PR01010 Flagellar P-ring protein signature 196 214 1.1E-77 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VFU_RS06780 a0efc971e7549b2022dce22667530155 373 PRINTS PR01010 Flagellar P-ring protein signature 129 147 1.1E-77 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VFU_RS06780 a0efc971e7549b2022dce22667530155 373 PRINTS PR01010 Flagellar P-ring protein signature 170 188 1.1E-77 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VFU_RS06780 a0efc971e7549b2022dce22667530155 373 PRINTS PR01010 Flagellar P-ring protein signature 112 129 1.1E-77 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VFU_RS06780 a0efc971e7549b2022dce22667530155 373 PRINTS PR01010 Flagellar P-ring protein signature 45 60 1.1E-77 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VFU_RS06780 a0efc971e7549b2022dce22667530155 373 PANTHER PTHR30381:SF1 1 373 1.3E-176 T 21-04-2016 VFU_RS06780 a0efc971e7549b2022dce22667530155 373 PANTHER PTHR30381 1 373 1.3E-176 T 21-04-2016 VFU_RS06780 a0efc971e7549b2022dce22667530155 373 Hamap MF_00416 Flagellar P-ring protein [flgI]. 6 373 37.106 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VFU_RS04825 92a567dd841a4c4fc91f844575e296e1 320 Pfam PF02401 LytB protein 7 288 5.2E-91 T 21-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 VFU_RS04825 92a567dd841a4c4fc91f844575e296e1 320 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 6 290 4.5E-95 T 21-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 VFU_RS04825 92a567dd841a4c4fc91f844575e296e1 320 PANTHER PTHR30426 5 316 2.4E-155 T 21-04-2016 VFU_RS04825 92a567dd841a4c4fc91f844575e296e1 320 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 5 292 37.503 T 21-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 VFU_RS03745 e73549ecc664c75407cfc73d55355dd0 502 SUPERFAMILY SSF52949 1 184 6.47E-52 T 21-04-2016 VFU_RS03745 e73549ecc664c75407cfc73d55355dd0 502 PANTHER PTHR11963 7 502 9.4E-264 T 21-04-2016 VFU_RS03745 e73549ecc664c75407cfc73d55355dd0 502 SUPERFAMILY SSF53187 179 496 1.91E-125 T 21-04-2016 VFU_RS03745 e73549ecc664c75407cfc73d55355dd0 502 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 187 489 6.0E-119 T 21-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VFU_RS03745 e73549ecc664c75407cfc73d55355dd0 502 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 349 356 - T 21-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VFU_RS03745 e73549ecc664c75407cfc73d55355dd0 502 Gene3D G3DSA:3.40.220.10 1 161 1.4E-67 T 21-04-2016 VFU_RS03745 e73549ecc664c75407cfc73d55355dd0 502 PRINTS PR00481 Cytosol aminopeptidase signature 286 307 5.1E-55 T 21-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VFU_RS03745 e73549ecc664c75407cfc73d55355dd0 502 PRINTS PR00481 Cytosol aminopeptidase signature 373 388 5.1E-55 T 21-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VFU_RS03745 e73549ecc664c75407cfc73d55355dd0 502 PRINTS PR00481 Cytosol aminopeptidase signature 264 281 5.1E-55 T 21-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VFU_RS03745 e73549ecc664c75407cfc73d55355dd0 502 PRINTS PR00481 Cytosol aminopeptidase signature 345 365 5.1E-55 T 21-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VFU_RS03745 e73549ecc664c75407cfc73d55355dd0 502 PRINTS PR00481 Cytosol aminopeptidase signature 323 344 5.1E-55 T 21-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VFU_RS03745 e73549ecc664c75407cfc73d55355dd0 502 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 497 40.914 T 21-04-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 VFU_RS03745 e73549ecc664c75407cfc73d55355dd0 502 Gene3D G3DSA:3.40.630.10 171 499 1.1E-139 T 21-04-2016 VFU_RS03745 e73549ecc664c75407cfc73d55355dd0 502 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 8.9E-34 T 21-04-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VFU_RS03745 e73549ecc664c75407cfc73d55355dd0 502 PANTHER PTHR11963:SF13 7 502 9.4E-264 T 21-04-2016 VFU_RS02190 9df9712139edccfbe01155a0fa58a1f3 462 PANTHER PTHR13932 4 456 1.5E-264 T 21-04-2016 VFU_RS02190 9df9712139edccfbe01155a0fa58a1f3 462 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 13 462 3.9E-205 T 21-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 VFU_RS02190 9df9712139edccfbe01155a0fa58a1f3 462 SUPERFAMILY SSF102114 11 449 9.29E-144 T 21-04-2016 VFU_RS02190 9df9712139edccfbe01155a0fa58a1f3 462 SMART SM00729 57 277 1.2E-52 T 21-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 VFU_RS02190 9df9712139edccfbe01155a0fa58a1f3 462 PIRSF PIRSF000167 8 459 3.7E-172 T 21-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 VFU_RS02190 9df9712139edccfbe01155a0fa58a1f3 462 Pfam PF06969 HemN C-terminal domain 368 436 1.8E-11 T 21-04-2016 IPR010723 HemN, C-terminal VFU_RS02190 9df9712139edccfbe01155a0fa58a1f3 462 Pfam PF04055 Radical SAM superfamily 62 232 2.9E-17 T 21-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VFU_RS02190 9df9712139edccfbe01155a0fa58a1f3 462 Gene3D G3DSA:3.80.30.20 58 289 7.7E-31 T 21-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe VFU_RS02190 9df9712139edccfbe01155a0fa58a1f3 462 PANTHER PTHR13932:SF6 4 456 1.5E-264 T 21-04-2016 VFU_RS06625 cf06fcdf7a6d583a11b1c0a8a4c2dbd2 356 PANTHER PTHR33209:SF2 1 356 3.9E-200 T 21-04-2016 VFU_RS06625 cf06fcdf7a6d583a11b1c0a8a4c2dbd2 356 Gene3D G3DSA:3.90.226.10 278 313 1.0E-35 T 21-04-2016 IPR029045 ClpP/crotonase-like domain VFU_RS06625 cf06fcdf7a6d583a11b1c0a8a4c2dbd2 356 Gene3D G3DSA:3.90.226.10 105 212 1.0E-35 T 21-04-2016 IPR029045 ClpP/crotonase-like domain VFU_RS06625 cf06fcdf7a6d583a11b1c0a8a4c2dbd2 356 PANTHER PTHR33209 1 356 3.9E-200 T 21-04-2016 VFU_RS06625 cf06fcdf7a6d583a11b1c0a8a4c2dbd2 356 SUPERFAMILY SSF52096 106 216 1.99E-28 T 21-04-2016 IPR029045 ClpP/crotonase-like domain VFU_RS06625 cf06fcdf7a6d583a11b1c0a8a4c2dbd2 356 SUPERFAMILY SSF52096 247 306 1.99E-28 T 21-04-2016 IPR029045 ClpP/crotonase-like domain VFU_RS06625 cf06fcdf7a6d583a11b1c0a8a4c2dbd2 356 Pfam PF08496 Peptidase family S49 N-terminal 5 165 4.3E-56 T 21-04-2016 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 VFU_RS06625 cf06fcdf7a6d583a11b1c0a8a4c2dbd2 356 Pfam PF01343 Peptidase family S49 168 316 4.4E-46 T 21-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 VFU_RS05725 0fbfc34ebcba7bc472ddadb37dafa2b8 554 PANTHER PTHR11575 1 554 4.5E-245 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VFU_RS05725 0fbfc34ebcba7bc472ddadb37dafa2b8 554 PANTHER PTHR11575:SF27 1 554 4.5E-245 T 21-04-2016 VFU_RS05725 0fbfc34ebcba7bc472ddadb37dafa2b8 554 Gene3D G3DSA:3.90.780.10 367 541 6.7E-51 T 21-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 VFU_RS05725 0fbfc34ebcba7bc472ddadb37dafa2b8 554 Pfam PF00149 Calcineurin-like phosphoesterase 38 259 1.4E-21 T 21-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 VFU_RS05725 0fbfc34ebcba7bc472ddadb37dafa2b8 554 Pfam PF02872 5'-nucleotidase, C-terminal domain 366 512 7.3E-33 T 21-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 VFU_RS05725 0fbfc34ebcba7bc472ddadb37dafa2b8 554 ProSitePatterns PS00785 5'-nucleotidase signature 1. 38 50 - T 21-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 VFU_RS05725 0fbfc34ebcba7bc472ddadb37dafa2b8 554 Gene3D G3DSA:3.60.21.10 32 364 5.7E-102 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like VFU_RS05725 0fbfc34ebcba7bc472ddadb37dafa2b8 554 SUPERFAMILY SSF55816 366 542 2.35E-51 T 21-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 VFU_RS05725 0fbfc34ebcba7bc472ddadb37dafa2b8 554 SUPERFAMILY SSF56300 31 364 5.36E-100 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like VFU_RS05725 0fbfc34ebcba7bc472ddadb37dafa2b8 554 PRINTS PR01607 Apyrase family signature 242 265 2.3E-52 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VFU_RS05725 0fbfc34ebcba7bc472ddadb37dafa2b8 554 PRINTS PR01607 Apyrase family signature 487 506 2.3E-52 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VFU_RS05725 0fbfc34ebcba7bc472ddadb37dafa2b8 554 PRINTS PR01607 Apyrase family signature 287 307 2.3E-52 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VFU_RS05725 0fbfc34ebcba7bc472ddadb37dafa2b8 554 PRINTS PR01607 Apyrase family signature 36 54 2.3E-52 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VFU_RS05725 0fbfc34ebcba7bc472ddadb37dafa2b8 554 PRINTS PR01607 Apyrase family signature 211 228 2.3E-52 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VFU_RS05725 0fbfc34ebcba7bc472ddadb37dafa2b8 554 PRINTS PR01607 Apyrase family signature 420 443 2.3E-52 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VFU_RS05725 0fbfc34ebcba7bc472ddadb37dafa2b8 554 ProSitePatterns PS00786 5'-nucleotidase signature 2. 113 124 - T 21-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 VFU_RS03265 02b99dad37be683d0622361942803775 611 PANTHER PTHR10342 223 582 1.1E-140 T 21-04-2016 VFU_RS03265 02b99dad37be683d0622361942803775 611 SUPERFAMILY SSF53649 248 585 9.95E-64 T 21-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VFU_RS03265 02b99dad37be683d0622361942803775 611 PANTHER PTHR10342:SF235 223 582 1.1E-140 T 21-04-2016 VFU_RS03265 02b99dad37be683d0622361942803775 611 Pfam PF00884 Sulfatase 251 526 3.9E-37 T 21-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 VFU_RS03265 02b99dad37be683d0622361942803775 611 Pfam PF11893 Domain of unknown function (DUF3413) 2 242 2.0E-68 T 21-04-2016 IPR024588 Inner membrane protein YejM, N-terminal VFU_RS03265 02b99dad37be683d0622361942803775 611 Gene3D G3DSA:3.40.720.10 251 547 4.8E-45 T 21-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VFU_RS03265 02b99dad37be683d0622361942803775 611 PIRSF PIRSF004950 1 611 4.3E-215 T 21-04-2016 IPR012159 Inner membrane protein YejM VFU_RS07600 59d6ccad8fbb35b7a495e90bcd711313 398 PIRSF PIRSF000722 1 398 9.7E-150 T 21-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VFU_RS07600 59d6ccad8fbb35b7a495e90bcd711313 398 PRINTS PR00471 Acetate kinase family signature 298 311 8.2E-46 T 21-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VFU_RS07600 59d6ccad8fbb35b7a495e90bcd711313 398 PRINTS PR00471 Acetate kinase family signature 321 337 8.2E-46 T 21-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VFU_RS07600 59d6ccad8fbb35b7a495e90bcd711313 398 PRINTS PR00471 Acetate kinase family signature 377 389 8.2E-46 T 21-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VFU_RS07600 59d6ccad8fbb35b7a495e90bcd711313 398 PRINTS PR00471 Acetate kinase family signature 202 223 8.2E-46 T 21-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VFU_RS07600 59d6ccad8fbb35b7a495e90bcd711313 398 PRINTS PR00471 Acetate kinase family signature 172 185 8.2E-46 T 21-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VFU_RS07600 59d6ccad8fbb35b7a495e90bcd711313 398 PRINTS PR00471 Acetate kinase family signature 5 16 8.2E-46 T 21-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VFU_RS07600 59d6ccad8fbb35b7a495e90bcd711313 398 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 21-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VFU_RS07600 59d6ccad8fbb35b7a495e90bcd711313 398 Gene3D G3DSA:3.30.420.40 204 395 3.1E-77 T 21-04-2016 VFU_RS07600 59d6ccad8fbb35b7a495e90bcd711313 398 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 202 219 - T 21-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VFU_RS07600 59d6ccad8fbb35b7a495e90bcd711313 398 SUPERFAMILY SSF53067 3 195 2.33E-65 T 21-04-2016 VFU_RS07600 59d6ccad8fbb35b7a495e90bcd711313 398 TIGRFAM TIGR00016 ackA: acetate kinase 2 396 2.0E-174 T 21-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VFU_RS07600 59d6ccad8fbb35b7a495e90bcd711313 398 SUPERFAMILY SSF53067 155 396 1.57E-87 T 21-04-2016 VFU_RS07600 59d6ccad8fbb35b7a495e90bcd711313 398 Hamap MF_00020 Acetate kinase [ackA]. 1 398 190.517 T 21-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VFU_RS07600 59d6ccad8fbb35b7a495e90bcd711313 398 Pfam PF00871 Acetokinase family 5 390 2.1E-167 T 21-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VFU_RS07600 59d6ccad8fbb35b7a495e90bcd711313 398 Gene3D G3DSA:3.30.420.40 90 203 4.4E-10 T 21-04-2016 VFU_RS07600 59d6ccad8fbb35b7a495e90bcd711313 398 PANTHER PTHR21060:SF15 1 398 1.2E-269 T 21-04-2016 VFU_RS07600 59d6ccad8fbb35b7a495e90bcd711313 398 PANTHER PTHR21060 1 398 1.2E-269 T 21-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VFU_RS13195 d6b2e4e9ba4945838e67fd2541f3ce01 376 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 34 160 1.2E-25 T 21-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VFU_RS13195 d6b2e4e9ba4945838e67fd2541f3ce01 376 Gene3D G3DSA:3.90.180.10 3 195 1.0E-67 T 21-04-2016 IPR011032 GroES-like VFU_RS13195 d6b2e4e9ba4945838e67fd2541f3ce01 376 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 8 375 4.5E-228 T 21-04-2016 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00040+1.1.1.-|KEGG: 00051+1.1.1.-|KEGG: 00071+1.1.1.1|KEGG: 00140+1.1.1.-|KEGG: 00240+1.1.1.-|KEGG: 00253+1.1.1.-|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00362+1.1.1.-|KEGG: 00363+1.1.1.-|KEGG: 00365+1.1.1.-|KEGG: 00400+1.1.1.-|KEGG: 00520+1.1.1.-|KEGG: 00523+1.1.1.-|KEGG: 00591+1.1.1.-|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00622+1.1.1.-|KEGG: 00625+1.1.1.1+1.1.1.-|KEGG: 00626+1.1.1.1|KEGG: 00633+1.1.1.-|KEGG: 00640+1.1.1.-|KEGG: 00650+1.1.1.-|KEGG: 00680+1.1.1.284+1.1.1.-|KEGG: 00720+1.1.1.-|KEGG: 00750+1.1.1.-|KEGG: 00830+1.1.1.1+1.1.1.-|KEGG: 00950+1.1.1.-|KEGG: 00966+1.1.1.-|KEGG: 00980+1.1.1.1|KEGG: 00981+1.1.1.-|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 VFU_RS13195 d6b2e4e9ba4945838e67fd2541f3ce01 376 SUPERFAMILY SSF51735 166 340 2.08E-49 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS13195 d6b2e4e9ba4945838e67fd2541f3ce01 376 SUPERFAMILY SSF50129 3 191 1.92E-72 T 21-04-2016 IPR011032 GroES-like VFU_RS13195 d6b2e4e9ba4945838e67fd2541f3ce01 376 SUPERFAMILY SSF50129 324 375 1.22E-12 T 21-04-2016 IPR011032 GroES-like VFU_RS13195 d6b2e4e9ba4945838e67fd2541f3ce01 376 PANTHER PTHR11695 134 376 3.1E-218 T 21-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 VFU_RS13195 d6b2e4e9ba4945838e67fd2541f3ce01 376 PANTHER PTHR11695 21 114 3.1E-218 T 21-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 VFU_RS13195 d6b2e4e9ba4945838e67fd2541f3ce01 376 SMART SM00829 16 373 7.7E-4 T 21-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VFU_RS13195 d6b2e4e9ba4945838e67fd2541f3ce01 376 PANTHER PTHR11695:SF560 134 376 3.1E-218 T 21-04-2016 VFU_RS13195 d6b2e4e9ba4945838e67fd2541f3ce01 376 PANTHER PTHR11695:SF560 21 114 3.1E-218 T 21-04-2016 VFU_RS13195 d6b2e4e9ba4945838e67fd2541f3ce01 376 Pfam PF00107 Zinc-binding dehydrogenase 203 322 4.8E-26 T 21-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VFU_RS13195 d6b2e4e9ba4945838e67fd2541f3ce01 376 Gene3D G3DSA:3.40.50.720 196 315 2.0E-45 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS13195 d6b2e4e9ba4945838e67fd2541f3ce01 376 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 67 81 - T 21-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 VFU_RS10895 792e285d02d08ded3d2b24e8e1672078 285 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 21-04-2016 IPR000540 Flagellar motor protein MotA, conserved site VFU_RS10895 792e285d02d08ded3d2b24e8e1672078 285 PANTHER PTHR30433 1 285 2.9E-79 T 21-04-2016 VFU_RS10895 792e285d02d08ded3d2b24e8e1672078 285 Pfam PF01618 MotA/TolQ/ExbB proton channel family 138 235 5.4E-12 T 21-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 VFU_RS10895 792e285d02d08ded3d2b24e8e1672078 285 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 281 1.2E-96 T 21-04-2016 IPR022522 Flagellar motor stator, MotA VFU_RS10895 792e285d02d08ded3d2b24e8e1672078 285 PANTHER PTHR30433:SF4 1 285 2.9E-79 T 21-04-2016 IPR022522 Flagellar motor stator, MotA VFU_RS19945 f325fa38954989dffef01c6f11cb9129 138 PANTHER PTHR30217:SF8 1 138 1.5E-91 T 21-04-2016 VFU_RS19945 f325fa38954989dffef01c6f11cb9129 138 PANTHER PTHR30217 1 138 1.5E-91 T 21-04-2016 VFU_RS19945 f325fa38954989dffef01c6f11cb9129 138 Pfam PF01136 Peptidase family U32 3 102 3.0E-6 T 21-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VFU_RS03075 7fc26b358ceaafaa1ba0d4617d905eaf 405 SUPERFAMILY SSF69864 177 399 2.22E-85 T 21-04-2016 VFU_RS03075 7fc26b358ceaafaa1ba0d4617d905eaf 405 PANTHER PTHR11587:SF6 6 401 0.0 T 21-04-2016 VFU_RS03075 7fc26b358ceaafaa1ba0d4617d905eaf 405 Gene3D G3DSA:3.90.1260.10 179 401 1.4E-86 T 21-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VFU_RS03075 7fc26b358ceaafaa1ba0d4617d905eaf 405 Gene3D G3DSA:3.40.50.620 7 175 2.0E-61 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VFU_RS03075 7fc26b358ceaafaa1ba0d4617d905eaf 405 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 12 20 - T 21-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VFU_RS03075 7fc26b358ceaafaa1ba0d4617d905eaf 405 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 121 132 - T 21-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VFU_RS03075 7fc26b358ceaafaa1ba0d4617d905eaf 405 TIGRFAM TIGR00032 argG: argininosuccinate synthase 8 395 6.4E-136 T 21-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VFU_RS03075 7fc26b358ceaafaa1ba0d4617d905eaf 405 PANTHER PTHR11587 6 401 0.0 T 21-04-2016 VFU_RS03075 7fc26b358ceaafaa1ba0d4617d905eaf 405 Hamap MF_00005 Argininosuccinate synthase [argG]. 6 402 51.627 T 21-04-2016 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VFU_RS03075 7fc26b358ceaafaa1ba0d4617d905eaf 405 SUPERFAMILY SSF52402 7 170 1.32E-46 T 21-04-2016 VFU_RS03075 7fc26b358ceaafaa1ba0d4617d905eaf 405 Pfam PF00764 Arginosuccinate synthase 10 396 2.9E-144 T 21-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VFU_RS08135 c67d5ddb06079ef1b45a893c14aa7ed0 295 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 65 2.9E-10 T 21-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VFU_RS08135 c67d5ddb06079ef1b45a893c14aa7ed0 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 292 7.3E-21 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS08135 c67d5ddb06079ef1b45a893c14aa7ed0 295 PANTHER PTHR30465:SF49 7 295 4.2E-158 T 21-04-2016 VFU_RS08135 c67d5ddb06079ef1b45a893c14aa7ed0 295 PANTHER PTHR30465 7 295 4.2E-158 T 21-04-2016 VFU_RS08135 c67d5ddb06079ef1b45a893c14aa7ed0 295 Gene3D G3DSA:1.10.3720.10 87 291 6.0E-23 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS08135 c67d5ddb06079ef1b45a893c14aa7ed0 295 SUPERFAMILY SSF161098 89 276 6.02E-25 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS08210 6184a7ca5be439c8cdca91dd5a58664f 231 PANTHER PTHR11079 3 218 2.2E-117 T 21-04-2016 VFU_RS08210 6184a7ca5be439c8cdca91dd5a58664f 231 SUPERFAMILY SSF55120 2 196 4.48E-46 T 21-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS08210 6184a7ca5be439c8cdca91dd5a58664f 231 PANTHER PTHR11079:SF62 3 218 2.2E-117 T 21-04-2016 VFU_RS08210 6184a7ca5be439c8cdca91dd5a58664f 231 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 47 61 - T 21-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS08210 6184a7ca5be439c8cdca91dd5a58664f 231 Pfam PF00849 RNA pseudouridylate synthase 10 153 2.2E-27 T 21-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS08210 6184a7ca5be439c8cdca91dd5a58664f 231 TIGRFAM TIGR01621 RluA-like: pseudouridine synthase Rlu family protein, TIGR01621 1 220 1.4E-107 T 21-04-2016 IPR006508 Pseudouridine synthase, RluA-like KEGG: 00627+5.4.99.- VFU_RS01615 714373f081fd1845a2bf37d841fe7a98 359 SUPERFAMILY SSF52540 1 341 7.63E-41 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS01615 714373f081fd1845a2bf37d841fe7a98 359 ProSitePatterns PS00617 RecF protein signature 1. 118 138 - T 21-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 VFU_RS01615 714373f081fd1845a2bf37d841fe7a98 359 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 359 96.215 T 21-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 VFU_RS01615 714373f081fd1845a2bf37d841fe7a98 359 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 356 1.8E-116 T 21-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 VFU_RS01615 714373f081fd1845a2bf37d841fe7a98 359 PANTHER PTHR32182 1 358 1.2E-69 T 21-04-2016 VFU_RS01615 714373f081fd1845a2bf37d841fe7a98 359 PANTHER PTHR32182:SF0 1 358 1.2E-69 T 21-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 VFU_RS01615 714373f081fd1845a2bf37d841fe7a98 359 Gene3D G3DSA:3.40.50.300 1 172 8.2E-41 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS01615 714373f081fd1845a2bf37d841fe7a98 359 Gene3D G3DSA:3.40.50.300 231 340 8.2E-41 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS01615 714373f081fd1845a2bf37d841fe7a98 359 ProSitePatterns PS00618 RecF protein signature 2. 299 317 - T 21-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 VFU_RS01615 714373f081fd1845a2bf37d841fe7a98 359 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 355 2.7E-36 T 21-04-2016 IPR003395 RecF/RecN/SMC, N-terminal VFU_RS21050 8c53ae4e2af3c1bdb03495aaf0ea8b6a 257 Pfam PF08345 Flagellar M-ring protein C-terminal 179 244 3.4E-16 T 21-04-2016 IPR013556 Flagellar M-ring C-terminal VFU_RS21050 8c53ae4e2af3c1bdb03495aaf0ea8b6a 257 PANTHER PTHR30046:SF0 6 257 4.0E-95 T 21-04-2016 VFU_RS21050 8c53ae4e2af3c1bdb03495aaf0ea8b6a 257 PANTHER PTHR30046 6 257 4.0E-95 T 21-04-2016 VFU_RS21050 8c53ae4e2af3c1bdb03495aaf0ea8b6a 257 PRINTS PR01009 Flagellar M-ring protein signature 192 210 1.7E-17 T 21-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VFU_RS21050 8c53ae4e2af3c1bdb03495aaf0ea8b6a 257 PRINTS PR01009 Flagellar M-ring protein signature 79 93 1.7E-17 T 21-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VFU_RS21050 8c53ae4e2af3c1bdb03495aaf0ea8b6a 257 PRINTS PR01009 Flagellar M-ring protein signature 122 140 1.7E-17 T 21-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VFU_RS21050 8c53ae4e2af3c1bdb03495aaf0ea8b6a 257 PRINTS PR01009 Flagellar M-ring protein signature 47 65 1.7E-17 T 21-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VFU_RS21050 8c53ae4e2af3c1bdb03495aaf0ea8b6a 257 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 6 250 9.4E-50 T 21-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VFU_RS21050 8c53ae4e2af3c1bdb03495aaf0ea8b6a 257 Pfam PF01514 Secretory protein of YscJ/FliF family 3 146 8.4E-46 T 21-04-2016 IPR006182 Secretory protein YscJ/FliF VFU_RS07840 8f43a4bcb95010fbe485d5ee6707184c 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 8.2E-78 T 21-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 VFU_RS07840 8f43a4bcb95010fbe485d5ee6707184c 245 SUPERFAMILY SSF51366 1 242 9.42E-63 T 21-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 VFU_RS07840 8f43a4bcb95010fbe485d5ee6707184c 245 Pfam PF00977 Histidine biosynthesis protein 1 234 5.0E-75 T 21-04-2016 IPR006062 Histidine biosynthesis GO:0000105 VFU_RS07840 8f43a4bcb95010fbe485d5ee6707184c 245 PANTHER PTHR21235:SF15 1 244 1.4E-109 T 21-04-2016 VFU_RS07840 8f43a4bcb95010fbe485d5ee6707184c 245 Gene3D G3DSA:3.20.20.70 1 242 1.6E-75 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS07840 8f43a4bcb95010fbe485d5ee6707184c 245 PANTHER PTHR21235 1 244 1.4E-109 T 21-04-2016 VFU_RS07840 8f43a4bcb95010fbe485d5ee6707184c 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 34.504 T 21-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 VFU_RS08875 428a2f37d1b0718ed76f9a3dca15e553 381 ProSitePatterns PS00480 Citrate synthase signature. 263 275 - T 21-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 VFU_RS08875 428a2f37d1b0718ed76f9a3dca15e553 381 PIRSF PIRSF001369 8 381 7.9E-116 T 21-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 VFU_RS08875 428a2f37d1b0718ed76f9a3dca15e553 381 Gene3D G3DSA:1.10.580.10 21 242 1.0E-73 T 21-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 VFU_RS08875 428a2f37d1b0718ed76f9a3dca15e553 381 Gene3D G3DSA:1.10.230.10 243 327 2.2E-30 T 21-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain VFU_RS08875 428a2f37d1b0718ed76f9a3dca15e553 381 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 15 380 1.9E-161 T 21-04-2016 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 VFU_RS08875 428a2f37d1b0718ed76f9a3dca15e553 381 PRINTS PR00143 Citrate synthase signature 333 347 1.2E-36 T 21-04-2016 IPR002020 Citrate synthase GO:0046912 VFU_RS08875 428a2f37d1b0718ed76f9a3dca15e553 381 PRINTS PR00143 Citrate synthase signature 313 329 1.2E-36 T 21-04-2016 IPR002020 Citrate synthase GO:0046912 VFU_RS08875 428a2f37d1b0718ed76f9a3dca15e553 381 PRINTS PR00143 Citrate synthase signature 203 231 1.2E-36 T 21-04-2016 IPR002020 Citrate synthase GO:0046912 VFU_RS08875 428a2f37d1b0718ed76f9a3dca15e553 381 PRINTS PR00143 Citrate synthase signature 256 276 1.2E-36 T 21-04-2016 IPR002020 Citrate synthase GO:0046912 VFU_RS08875 428a2f37d1b0718ed76f9a3dca15e553 381 PRINTS PR00143 Citrate synthase signature 181 196 1.2E-36 T 21-04-2016 IPR002020 Citrate synthase GO:0046912 VFU_RS08875 428a2f37d1b0718ed76f9a3dca15e553 381 PRINTS PR00143 Citrate synthase signature 130 143 1.2E-36 T 21-04-2016 IPR002020 Citrate synthase GO:0046912 VFU_RS08875 428a2f37d1b0718ed76f9a3dca15e553 381 SUPERFAMILY SSF48256 14 380 6.67E-125 T 21-04-2016 IPR002020 Citrate synthase GO:0046912 VFU_RS08875 428a2f37d1b0718ed76f9a3dca15e553 381 PANTHER PTHR11739 15 380 6.3E-154 T 21-04-2016 IPR002020 Citrate synthase GO:0046912 VFU_RS08875 428a2f37d1b0718ed76f9a3dca15e553 381 Pfam PF00285 Citrate synthase, C-terminal domain 15 362 1.8E-113 T 21-04-2016 IPR002020 Citrate synthase GO:0046912 VFU_RS08875 428a2f37d1b0718ed76f9a3dca15e553 381 PANTHER PTHR11739:SF12 15 380 6.3E-154 T 21-04-2016 VFU_RS00285 1017e375fe24fbdfffd5367a8395796e 320 Pfam PF02237 Biotin protein ligase C terminal domain 272 317 4.8E-10 T 21-04-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15 VFU_RS00285 1017e375fe24fbdfffd5367a8395796e 320 PANTHER PTHR12835 16 317 5.9E-89 T 21-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 VFU_RS00285 1017e375fe24fbdfffd5367a8395796e 320 SUPERFAMILY SSF46785 6 60 7.49E-10 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS00285 1017e375fe24fbdfffd5367a8395796e 320 Gene3D G3DSA:1.10.10.10 3 63 1.2E-22 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS00285 1017e375fe24fbdfffd5367a8395796e 320 Gene3D G3DSA:2.30.30.100 271 318 1.7E-21 T 21-04-2016 VFU_RS00285 1017e375fe24fbdfffd5367a8395796e 320 Pfam PF08279 HTH domain 9 59 6.8E-9 T 21-04-2016 IPR013196 Helix-turn-helix, type 11 VFU_RS00285 1017e375fe24fbdfffd5367a8395796e 320 SUPERFAMILY SSF50037 271 317 9.61E-11 T 21-04-2016 IPR008988 Transcriptional repressor, C-terminal VFU_RS00285 1017e375fe24fbdfffd5367a8395796e 320 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 80 317 5.7E-69 T 21-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 VFU_RS00285 1017e375fe24fbdfffd5367a8395796e 320 Gene3D G3DSA:3.30.930.10 69 269 2.2E-59 T 21-04-2016 VFU_RS00285 1017e375fe24fbdfffd5367a8395796e 320 SUPERFAMILY SSF55681 70 268 1.99E-59 T 21-04-2016 VFU_RS00285 1017e375fe24fbdfffd5367a8395796e 320 Pfam PF03099 Biotin/lipoate A/B protein ligase family 85 207 4.2E-21 T 21-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 VFU_RS00285 1017e375fe24fbdfffd5367a8395796e 320 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 7 317 32.863 T 21-04-2016 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 VFU_RS05250 eefbf3bd4421411d38a63c43f6d848cb 253 PANTHER PTHR12534 1 242 1.3E-123 T 21-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 VFU_RS05250 eefbf3bd4421411d38a63c43f6d848cb 253 Pfam PF00318 Ribosomal protein S2 20 235 4.7E-95 T 21-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS05250 eefbf3bd4421411d38a63c43f6d848cb 253 SUPERFAMILY SSF52313 17 241 1.83E-96 T 21-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain VFU_RS05250 eefbf3bd4421411d38a63c43f6d848cb 253 Gene3D G3DSA:3.40.50.10490 34 110 1.1E-65 T 21-04-2016 VFU_RS05250 eefbf3bd4421411d38a63c43f6d848cb 253 Gene3D G3DSA:3.40.50.10490 169 242 1.1E-65 T 21-04-2016 VFU_RS05250 eefbf3bd4421411d38a63c43f6d848cb 253 PRINTS PR00395 Ribosomal protein S2 signature 98 115 6.0E-38 T 21-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS05250 eefbf3bd4421411d38a63c43f6d848cb 253 PRINTS PR00395 Ribosomal protein S2 signature 186 197 6.0E-38 T 21-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS05250 eefbf3bd4421411d38a63c43f6d848cb 253 PRINTS PR00395 Ribosomal protein S2 signature 207 221 6.0E-38 T 21-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS05250 eefbf3bd4421411d38a63c43f6d848cb 253 PRINTS PR00395 Ribosomal protein S2 signature 48 57 6.0E-38 T 21-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS05250 eefbf3bd4421411d38a63c43f6d848cb 253 PRINTS PR00395 Ribosomal protein S2 signature 17 35 6.0E-38 T 21-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS05250 eefbf3bd4421411d38a63c43f6d848cb 253 PRINTS PR00395 Ribosomal protein S2 signature 169 186 6.0E-38 T 21-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS05250 eefbf3bd4421411d38a63c43f6d848cb 253 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 17 28 - T 21-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 VFU_RS05250 eefbf3bd4421411d38a63c43f6d848cb 253 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 13 236 41.35 T 21-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 VFU_RS05250 eefbf3bd4421411d38a63c43f6d848cb 253 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 169 193 - T 21-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 VFU_RS05250 eefbf3bd4421411d38a63c43f6d848cb 253 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 14 237 1.7E-108 T 21-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 VFU_RS05250 eefbf3bd4421411d38a63c43f6d848cb 253 Gene3D G3DSA:1.10.287.610 111 163 3.1E-27 T 21-04-2016 VFU_RS00655 046fdd95a3c962b300b6ba27ebc4f668 276 Gene3D G3DSA:3.90.550.10 8 246 8.8E-31 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VFU_RS00655 046fdd95a3c962b300b6ba27ebc4f668 276 PANTHER PTHR22916 7 262 2.3E-22 T 21-04-2016 VFU_RS00655 046fdd95a3c962b300b6ba27ebc4f668 276 SUPERFAMILY SSF53448 7 238 4.13E-28 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VFU_RS00655 046fdd95a3c962b300b6ba27ebc4f668 276 PANTHER PTHR22916:SF28 7 262 2.3E-22 T 21-04-2016 VFU_RS00655 046fdd95a3c962b300b6ba27ebc4f668 276 Pfam PF00535 Glycosyl transferase family 2 11 135 1.2E-10 T 21-04-2016 IPR001173 Glycosyltransferase 2-like VFU_RS06990 5c41808fa94e3409a9b5a676068f27d3 579 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 39 568 1.8E-72 T 21-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VFU_RS06990 5c41808fa94e3409a9b5a676068f27d3 579 PIRSF PIRSF004862 21 570 1.1E-123 T 21-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VFU_RS06990 5c41808fa94e3409a9b5a676068f27d3 579 PRINTS PR01009 Flagellar M-ring protein signature 215 233 4.7E-27 T 21-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VFU_RS06990 5c41808fa94e3409a9b5a676068f27d3 579 PRINTS PR01009 Flagellar M-ring protein signature 357 381 4.7E-27 T 21-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VFU_RS06990 5c41808fa94e3409a9b5a676068f27d3 579 PRINTS PR01009 Flagellar M-ring protein signature 286 304 4.7E-27 T 21-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VFU_RS06990 5c41808fa94e3409a9b5a676068f27d3 579 PRINTS PR01009 Flagellar M-ring protein signature 171 185 4.7E-27 T 21-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VFU_RS06990 5c41808fa94e3409a9b5a676068f27d3 579 PRINTS PR01009 Flagellar M-ring protein signature 139 157 4.7E-27 T 21-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VFU_RS06990 5c41808fa94e3409a9b5a676068f27d3 579 Pfam PF01514 Secretory protein of YscJ/FliF family 48 239 7.8E-62 T 21-04-2016 IPR006182 Secretory protein YscJ/FliF VFU_RS06990 5c41808fa94e3409a9b5a676068f27d3 579 PANTHER PTHR30046:SF0 19 570 3.6E-118 T 21-04-2016 VFU_RS06990 5c41808fa94e3409a9b5a676068f27d3 579 PANTHER PTHR30046 19 570 3.6E-118 T 21-04-2016 VFU_RS06990 5c41808fa94e3409a9b5a676068f27d3 579 Pfam PF08345 Flagellar M-ring protein C-terminal 273 427 2.0E-36 T 21-04-2016 IPR013556 Flagellar M-ring C-terminal VFU_RS05220 cbc25ebd03a753dfd6ffa0ef69e47615 156 PANTHER PTHR11078 5 154 7.0E-47 T 21-04-2016 IPR011605 NusB antitermination factor GO:0006353 VFU_RS05220 cbc25ebd03a753dfd6ffa0ef69e47615 156 Gene3D G3DSA:1.10.940.10 9 155 3.7E-42 T 21-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 VFU_RS05220 cbc25ebd03a753dfd6ffa0ef69e47615 156 Pfam PF01029 NusB family 11 149 3.7E-35 T 21-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 VFU_RS05220 cbc25ebd03a753dfd6ffa0ef69e47615 156 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 8 153 22.823 T 21-04-2016 IPR011605 NusB antitermination factor GO:0006353 VFU_RS05220 cbc25ebd03a753dfd6ffa0ef69e47615 156 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 10 150 9.5E-42 T 21-04-2016 IPR011605 NusB antitermination factor GO:0006353 VFU_RS05220 cbc25ebd03a753dfd6ffa0ef69e47615 156 SUPERFAMILY SSF48013 7 153 6.67E-39 T 21-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 VFU_RS09545 608d7162a0749c574a47dd0d43ba16e6 461 Pfam PF01235 Sodium:alanine symporter family 54 454 1.5E-139 T 21-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VFU_RS09545 608d7162a0749c574a47dd0d43ba16e6 461 PRINTS PR00175 Sodium/alanine symporter signature 307 325 4.7E-52 T 21-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VFU_RS09545 608d7162a0749c574a47dd0d43ba16e6 461 PRINTS PR00175 Sodium/alanine symporter signature 353 375 4.7E-52 T 21-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VFU_RS09545 608d7162a0749c574a47dd0d43ba16e6 461 PRINTS PR00175 Sodium/alanine symporter signature 412 432 4.7E-52 T 21-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VFU_RS09545 608d7162a0749c574a47dd0d43ba16e6 461 PRINTS PR00175 Sodium/alanine symporter signature 92 114 4.7E-52 T 21-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VFU_RS09545 608d7162a0749c574a47dd0d43ba16e6 461 PRINTS PR00175 Sodium/alanine symporter signature 184 202 4.7E-52 T 21-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VFU_RS09545 608d7162a0749c574a47dd0d43ba16e6 461 PRINTS PR00175 Sodium/alanine symporter signature 212 231 4.7E-52 T 21-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VFU_RS09545 608d7162a0749c574a47dd0d43ba16e6 461 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 92 107 - T 21-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VFU_RS09545 608d7162a0749c574a47dd0d43ba16e6 461 PANTHER PTHR30330:SF3 1 461 5.8E-233 T 21-04-2016 VFU_RS09545 608d7162a0749c574a47dd0d43ba16e6 461 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 442 8.5E-155 T 21-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VFU_RS09545 608d7162a0749c574a47dd0d43ba16e6 461 PANTHER PTHR30330 1 461 5.8E-233 T 21-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VFU_RS02765 a18a8816f2ff35f2ab8f86874d687a37 1194 SUPERFAMILY SSF51445 511 1086 8.99E-132 T 21-04-2016 IPR017853 Glycoside hydrolase superfamily VFU_RS02765 a18a8816f2ff35f2ab8f86874d687a37 1194 PANTHER PTHR10357 664 823 1.5E-161 T 21-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 VFU_RS02765 a18a8816f2ff35f2ab8f86874d687a37 1194 TIGRFAM TIGR02103 pullul_strch: alpha-1,6-glucosidases, pullulanase-type 288 1191 0.0 T 21-04-2016 IPR011839 Alpha-1,6-glucosidases, pullulanase-type GO:0005975|GO:0051060 VFU_RS02765 a18a8816f2ff35f2ab8f86874d687a37 1194 Gene3D G3DSA:3.20.20.80 530 608 6.3E-78 T 21-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VFU_RS02765 a18a8816f2ff35f2ab8f86874d687a37 1194 Gene3D G3DSA:3.20.20.80 1059 1086 6.3E-78 T 21-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VFU_RS02765 a18a8816f2ff35f2ab8f86874d687a37 1194 Gene3D G3DSA:3.20.20.80 666 859 6.3E-78 T 21-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VFU_RS02765 a18a8816f2ff35f2ab8f86874d687a37 1194 Gene3D G3DSA:3.20.20.80 915 1022 6.3E-78 T 21-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VFU_RS02765 a18a8816f2ff35f2ab8f86874d687a37 1194 Pfam PF11852 Domain of unknown function (DUF3372) 1023 1190 6.0E-48 T 21-04-2016 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal VFU_RS02765 a18a8816f2ff35f2ab8f86874d687a37 1194 Pfam PF03714 Bacterial pullanase-associated domain 172 275 1.9E-11 T 21-04-2016 IPR005323 Bacterial pullanase-associated domain GO:0005975|GO:0030246 VFU_RS02765 a18a8816f2ff35f2ab8f86874d687a37 1194 Pfam PF03714 Bacterial pullanase-associated domain 42 158 9.5E-13 T 21-04-2016 IPR005323 Bacterial pullanase-associated domain GO:0005975|GO:0030246 VFU_RS02765 a18a8816f2ff35f2ab8f86874d687a37 1194 SUPERFAMILY SSF49452 14 158 2.65E-26 T 21-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 VFU_RS02765 a18a8816f2ff35f2ab8f86874d687a37 1194 SUPERFAMILY SSF81296 415 518 1.42E-22 T 21-04-2016 IPR014756 Immunoglobulin E-set VFU_RS02765 a18a8816f2ff35f2ab8f86874d687a37 1194 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 415 499 1.3E-13 T 21-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 VFU_RS02765 a18a8816f2ff35f2ab8f86874d687a37 1194 PANTHER PTHR10357 397 604 1.5E-161 T 21-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 VFU_RS02765 a18a8816f2ff35f2ab8f86874d687a37 1194 PANTHER PTHR10357 1062 1190 1.5E-161 T 21-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 VFU_RS02765 a18a8816f2ff35f2ab8f86874d687a37 1194 PANTHER PTHR10357 842 1036 1.5E-161 T 21-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 VFU_RS02765 a18a8816f2ff35f2ab8f86874d687a37 1194 SUPERFAMILY SSF81296 279 405 2.52E-20 T 21-04-2016 IPR014756 Immunoglobulin E-set VFU_RS02765 a18a8816f2ff35f2ab8f86874d687a37 1194 SUPERFAMILY SSF51011 1088 1191 1.08E-25 T 21-04-2016 VFU_RS02765 a18a8816f2ff35f2ab8f86874d687a37 1194 Gene3D G3DSA:2.60.40.10 415 513 6.8E-17 T 21-04-2016 IPR013783 Immunoglobulin-like fold VFU_RS02765 a18a8816f2ff35f2ab8f86874d687a37 1194 PANTHER PTHR10357:SF99 664 823 1.5E-161 T 21-04-2016 VFU_RS02765 a18a8816f2ff35f2ab8f86874d687a37 1194 SUPERFAMILY SSF49452 166 275 3.27E-28 T 21-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 VFU_RS02765 a18a8816f2ff35f2ab8f86874d687a37 1194 PANTHER PTHR10357:SF99 397 604 1.5E-161 T 21-04-2016 VFU_RS02765 a18a8816f2ff35f2ab8f86874d687a37 1194 PANTHER PTHR10357:SF99 1062 1190 1.5E-161 T 21-04-2016 VFU_RS02765 a18a8816f2ff35f2ab8f86874d687a37 1194 PANTHER PTHR10357:SF99 842 1036 1.5E-161 T 21-04-2016 VFU_RS05055 fde7e7e550a1712ac547c71058760480 414 PANTHER PTHR30578 3 414 3.7E-261 T 21-04-2016 VFU_RS05055 fde7e7e550a1712ac547c71058760480 414 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 412 36.423 T 21-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VFU_RS05055 fde7e7e550a1712ac547c71058760480 414 PANTHER PTHR30578:SF1 3 414 3.7E-261 T 21-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VFU_RS05055 fde7e7e550a1712ac547c71058760480 414 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 408 1.2E-201 T 21-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VFU_RS05055 fde7e7e550a1712ac547c71058760480 414 Pfam PF03116 NQR2, RnfD, RnfE family 41 406 8.8E-108 T 21-04-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 VFU_RS05055 fde7e7e550a1712ac547c71058760480 414 PIRSF PIRSF016055 1 414 2.7E-200 T 21-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VFU_RS15240 3bf3a2b220f6c977f78e4bcfe9711580 373 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 209 - T 21-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VFU_RS15240 3bf3a2b220f6c977f78e4bcfe9711580 373 PANTHER PTHR21152 1 371 1.0E-126 T 21-04-2016 VFU_RS15240 3bf3a2b220f6c977f78e4bcfe9711580 373 SUPERFAMILY SSF53383 9 371 1.17E-102 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VFU_RS15240 3bf3a2b220f6c977f78e4bcfe9711580 373 Gene3D G3DSA:3.90.1150.10 268 372 1.0E-37 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VFU_RS15240 3bf3a2b220f6c977f78e4bcfe9711580 373 Gene3D G3DSA:3.40.640.10 23 267 4.4E-59 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VFU_RS15240 3bf3a2b220f6c977f78e4bcfe9711580 373 Pfam PF00266 Aminotransferase class-V 13 339 1.3E-38 T 21-04-2016 IPR000192 Aminotransferase class V domain VFU_RS15240 3bf3a2b220f6c977f78e4bcfe9711580 373 PIRSF PIRSF000524 5 373 2.7E-110 T 21-04-2016 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 VFU_RS03620 a189928026ad9685e061fa005d592128 241 PANTHER PTHR24220 5 238 1.4E-151 T 21-04-2016 VFU_RS03620 a189928026ad9685e061fa005d592128 241 Pfam PF00005 ABC transporter 20 166 5.1E-34 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS03620 a189928026ad9685e061fa005d592128 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 214 236 4.2E-9 T 21-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal VFU_RS03620 a189928026ad9685e061fa005d592128 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS03620 a189928026ad9685e061fa005d592128 241 PANTHER PTHR24220:SF497 5 238 1.4E-151 T 21-04-2016 VFU_RS03620 a189928026ad9685e061fa005d592128 241 Gene3D G3DSA:3.40.50.300 3 235 1.8E-69 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS03620 a189928026ad9685e061fa005d592128 241 SUPERFAMILY SSF52540 3 237 2.27E-64 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS03620 a189928026ad9685e061fa005d592128 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 241 2.5E-126 T 21-04-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 VFU_RS03620 a189928026ad9685e061fa005d592128 241 SMART SM00382 28 231 5.4E-8 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS07615 218ef6e713cd6c060c8b993ee1c6a299 323 Pfam PF02653 Branched-chain amino acid transport system / permease component 7 268 3.1E-28 T 21-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 VFU_RS07615 218ef6e713cd6c060c8b993ee1c6a299 323 PANTHER PTHR32196 1 305 9.1E-145 T 21-04-2016 VFU_RS07615 218ef6e713cd6c060c8b993ee1c6a299 323 PANTHER PTHR32196:SF27 1 305 9.1E-145 T 21-04-2016 VFU_RS14170 b3901a38d0e8ca33ae8eb27eb36dbd47 294 Pfam PF03466 LysR substrate binding domain 90 289 3.2E-17 T 21-04-2016 IPR005119 LysR, substrate-binding VFU_RS14170 b3901a38d0e8ca33ae8eb27eb36dbd47 294 PANTHER PTHR30126 5 287 1.4E-37 T 21-04-2016 VFU_RS14170 b3901a38d0e8ca33ae8eb27eb36dbd47 294 SUPERFAMILY SSF53850 91 291 3.44E-16 T 21-04-2016 VFU_RS14170 b3901a38d0e8ca33ae8eb27eb36dbd47 294 SUPERFAMILY SSF46785 5 90 1.88E-18 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS14170 b3901a38d0e8ca33ae8eb27eb36dbd47 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 3.1E-17 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS14170 b3901a38d0e8ca33ae8eb27eb36dbd47 294 Gene3D G3DSA:3.40.190.10 191 254 4.0E-4 T 21-04-2016 VFU_RS14170 b3901a38d0e8ca33ae8eb27eb36dbd47 294 Gene3D G3DSA:3.40.190.10 86 190 1.3E-8 T 21-04-2016 VFU_RS14170 b3901a38d0e8ca33ae8eb27eb36dbd47 294 Gene3D G3DSA:1.10.10.10 5 85 8.3E-22 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS08600 1597e9fe92e33310b4aa9bbbc73e5452 455 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 357 446 1.7E-7 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS08600 1597e9fe92e33310b4aa9bbbc73e5452 455 PANTHER PTHR24421:SF1 104 447 1.1E-68 T 21-04-2016 VFU_RS08600 1597e9fe92e33310b4aa9bbbc73e5452 455 PANTHER PTHR24421 104 447 1.1E-68 T 21-04-2016 VFU_RS08600 1597e9fe92e33310b4aa9bbbc73e5452 455 SMART SM00387 354 448 3.4E-8 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS08600 1597e9fe92e33310b4aa9bbbc73e5452 455 PIRSF PIRSF037314 1 455 5.8E-184 T 21-04-2016 IPR017171 Signal transduction histidine kinase, MctS VFU_RS08600 1597e9fe92e33310b4aa9bbbc73e5452 455 SMART SM01049 42 133 3.5E-30 T 21-04-2016 IPR033480 Single Cache domain 2 VFU_RS08600 1597e9fe92e33310b4aa9bbbc73e5452 455 Gene3D G3DSA:3.30.450.20 37 184 7.0E-50 T 21-04-2016 VFU_RS08600 1597e9fe92e33310b4aa9bbbc73e5452 455 Pfam PF17200 Single Cache domain 2 45 192 1.9E-43 T 21-04-2016 IPR033480 Single Cache domain 2 VFU_RS08600 1597e9fe92e33310b4aa9bbbc73e5452 455 Pfam PF07730 Histidine kinase 250 315 1.2E-15 T 21-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 VFU_RS08600 1597e9fe92e33310b4aa9bbbc73e5452 455 SUPERFAMILY SSF55874 324 444 4.85E-19 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS08600 1597e9fe92e33310b4aa9bbbc73e5452 455 Gene3D G3DSA:3.30.565.10 337 446 6.0E-12 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS12055 795f892b69417d677420b9af5aabeefb 94 Pfam PF07023 Protein of unknown function (DUF1315) 5 84 6.4E-28 T 21-04-2016 IPR009749 Protein of unknown function DUF1315 VFU_RS21980 95d2f892539ba963237318f8a24ccc9d 279 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 1 276 2.8E-46 T 21-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VFU_RS21980 95d2f892539ba963237318f8a24ccc9d 279 Pfam PF08345 Flagellar M-ring protein C-terminal 119 273 3.9E-37 T 21-04-2016 IPR013556 Flagellar M-ring C-terminal VFU_RS21980 95d2f892539ba963237318f8a24ccc9d 279 PANTHER PTHR30046 1 275 2.1E-63 T 21-04-2016 VFU_RS21980 95d2f892539ba963237318f8a24ccc9d 279 PANTHER PTHR30046:SF0 1 275 2.1E-63 T 21-04-2016 VFU_RS21980 95d2f892539ba963237318f8a24ccc9d 279 PRINTS PR01009 Flagellar M-ring protein signature 132 150 2.2E-20 T 21-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VFU_RS21980 95d2f892539ba963237318f8a24ccc9d 279 PRINTS PR01009 Flagellar M-ring protein signature 61 79 2.2E-20 T 21-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VFU_RS21980 95d2f892539ba963237318f8a24ccc9d 279 PRINTS PR01009 Flagellar M-ring protein signature 203 227 2.2E-20 T 21-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VFU_RS21980 95d2f892539ba963237318f8a24ccc9d 279 PRINTS PR01009 Flagellar M-ring protein signature 17 31 2.2E-20 T 21-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VFU_RS21980 95d2f892539ba963237318f8a24ccc9d 279 Pfam PF01514 Secretory protein of YscJ/FliF family 1 85 3.6E-29 T 21-04-2016 IPR006182 Secretory protein YscJ/FliF VFU_RS00760 02baa6b461698e9ca0933c2c956888a7 289 Pfam PF01636 Phosphotransferase enzyme family 143 217 1.4E-7 T 21-04-2016 IPR002575 Aminoglycoside phosphotransferase VFU_RS00760 02baa6b461698e9ca0933c2c956888a7 289 SUPERFAMILY SSF56112 141 233 3.48E-9 T 21-04-2016 IPR011009 Protein kinase-like domain VFU_RS00760 02baa6b461698e9ca0933c2c956888a7 289 Gene3D G3DSA:3.90.1200.10 149 216 3.9E-9 T 21-04-2016 VFU_RS11325 5e04398b013d9e076fc4393c6298c776 387 PANTHER PTHR32502 232 384 2.5E-138 T 21-04-2016 VFU_RS11325 5e04398b013d9e076fc4393c6298c776 387 PANTHER PTHR32502 1 185 2.5E-138 T 21-04-2016 VFU_RS11325 5e04398b013d9e076fc4393c6298c776 387 SUPERFAMILY SSF53697 20 370 1.82E-50 T 21-04-2016 VFU_RS11325 5e04398b013d9e076fc4393c6298c776 387 PANTHER PTHR32502:SF3 232 384 2.5E-138 T 21-04-2016 VFU_RS11325 5e04398b013d9e076fc4393c6298c776 387 PANTHER PTHR32502:SF3 1 185 2.5E-138 T 21-04-2016 VFU_RS11325 5e04398b013d9e076fc4393c6298c776 387 Gene3D G3DSA:3.40.50.10490 209 373 3.8E-45 T 21-04-2016 VFU_RS11325 5e04398b013d9e076fc4393c6298c776 387 TIGRFAM TIGR02815 agaS_fam: putative sugar isomerase, AgaS family 17 379 8.5E-176 T 21-04-2016 IPR014180 Sugar isomerase, AgaS GO:0016861 KEGG: 00040+5.3.1.-|KEGG: 00052+5.3.1.- VFU_RS11325 5e04398b013d9e076fc4393c6298c776 387 Pfam PF01380 SIS domain 59 191 4.9E-16 T 21-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 VFU_RS11325 5e04398b013d9e076fc4393c6298c776 387 Gene3D G3DSA:3.40.50.10490 4 194 1.3E-69 T 21-04-2016 VFU_RS02680 9f63d31a280a817672eec97ffb5821fe 601 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 6 597 3.7E-248 T 21-04-2016 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12|UniPathway: UPA00226 VFU_RS02680 9f63d31a280a817672eec97ffb5821fe 601 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 504 515 - T 21-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VFU_RS02680 9f63d31a280a817672eec97ffb5821fe 601 SUPERFAMILY SSF52016 418 598 4.0E-54 T 21-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VFU_RS02680 9f63d31a280a817672eec97ffb5821fe 601 PANTHER PTHR21000 3 595 0.0 T 21-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VFU_RS02680 9f63d31a280a817672eec97ffb5821fe 601 SUPERFAMILY SSF143975 4 417 1.31E-128 T 21-04-2016 VFU_RS02680 9f63d31a280a817672eec97ffb5821fe 601 Pfam PF00920 Dehydratase family 67 594 1.6E-147 T 21-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VFU_RS02680 9f63d31a280a817672eec97ffb5821fe 601 PANTHER PTHR21000:SF9 3 595 0.0 T 21-04-2016 VFU_RS02680 9f63d31a280a817672eec97ffb5821fe 601 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 155 165 - T 21-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VFU_RS07475 f837093224490ad53bf397e71a64550d 204 Pfam PF11659 Protein of unknown function (DUF3261) 10 167 4.7E-44 T 21-04-2016 IPR021675 Protein of unknown function DUF3261 VFU_RS11595 9e14d3d52ddbe745ceb88bc7e96d7109 643 PANTHER PTHR30619:SF2 1 639 1.0E-173 T 21-04-2016 VFU_RS11595 9e14d3d52ddbe745ceb88bc7e96d7109 643 PANTHER PTHR30619 1 639 1.0E-173 T 21-04-2016 VFU_RS11595 9e14d3d52ddbe745ceb88bc7e96d7109 643 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 25 609 9.5E-128 T 21-04-2016 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 VFU_RS11595 9e14d3d52ddbe745ceb88bc7e96d7109 643 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 127 299 1.5E-31 T 21-04-2016 IPR004477 ComEC/Rec2-related protein VFU_RS11595 9e14d3d52ddbe745ceb88bc7e96d7109 643 SUPERFAMILY SSF56281 385 624 8.68E-42 T 21-04-2016 IPR001279 Metallo-beta-lactamase VFU_RS11595 9e14d3d52ddbe745ceb88bc7e96d7109 643 Pfam PF03772 Competence protein 105 358 3.3E-56 T 21-04-2016 IPR004477 ComEC/Rec2-related protein VFU_RS11595 9e14d3d52ddbe745ceb88bc7e96d7109 643 Gene3D G3DSA:3.60.15.10 381 606 7.6E-30 T 21-04-2016 IPR001279 Metallo-beta-lactamase VFU_RS11595 9e14d3d52ddbe745ceb88bc7e96d7109 643 SMART SM00849 397 580 3.0E-11 T 21-04-2016 IPR001279 Metallo-beta-lactamase VFU_RS11595 9e14d3d52ddbe745ceb88bc7e96d7109 643 Pfam PF00753 Metallo-beta-lactamase superfamily 395 574 7.3E-12 T 21-04-2016 IPR001279 Metallo-beta-lactamase VFU_RS09700 93f43812413c0f57570da5bdf3363eff 176 Pfam PF00929 Exonuclease 7 171 6.8E-11 T 21-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VFU_RS09700 93f43812413c0f57570da5bdf3363eff 176 SMART SM00479 5 176 3.5E-4 T 21-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VFU_RS09700 93f43812413c0f57570da5bdf3363eff 176 Gene3D G3DSA:3.30.420.10 2 176 6.1E-39 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VFU_RS09700 93f43812413c0f57570da5bdf3363eff 176 SUPERFAMILY SSF53098 3 175 1.26E-29 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VFU_RS09700 93f43812413c0f57570da5bdf3363eff 176 PANTHER PTHR23044:SF5 1 176 1.5E-60 T 21-04-2016 VFU_RS09700 93f43812413c0f57570da5bdf3363eff 176 PANTHER PTHR23044 1 176 1.5E-60 T 21-04-2016 VFU_RS12895 d381ef96a761187b0ad908324102adb8 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 321 4.3E-151 T 21-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 VFU_RS12895 d381ef96a761187b0ad908324102adb8 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 155.621 T 21-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 VFU_RS12895 d381ef96a761187b0ad908324102adb8 321 Pfam PF04055 Radical SAM superfamily 91 252 6.7E-18 T 21-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VFU_RS12895 d381ef96a761187b0ad908324102adb8 321 PANTHER PTHR10949 4 321 3.2E-179 T 21-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 VFU_RS12895 d381ef96a761187b0ad908324102adb8 321 Gene3D G3DSA:3.20.20.70 53 312 2.2E-70 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS12895 d381ef96a761187b0ad908324102adb8 321 PIRSF PIRSF005963 1 321 2.0E-129 T 21-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 VFU_RS12895 d381ef96a761187b0ad908324102adb8 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 26 73 1.9E-8 T 21-04-2016 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 VFU_RS12895 d381ef96a761187b0ad908324102adb8 321 SMART SM00729 84 293 1.4E-19 T 21-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 VFU_RS12895 d381ef96a761187b0ad908324102adb8 321 SUPERFAMILY SSF102114 52 316 4.97E-68 T 21-04-2016 VFU_RS11220 64a9aebd669ea363f62835e937814ec3 547 TIGRFAM TIGR03799 NOD_PanD_pyr: putative pyridoxal-dependent aspartate 1-decarboxylase 6 527 6.0E-295 T 21-04-2016 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent VFU_RS11220 64a9aebd669ea363f62835e937814ec3 547 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 62 442 1.1E-54 T 21-04-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 VFU_RS11220 64a9aebd669ea363f62835e937814ec3 547 Gene3D G3DSA:3.40.640.10 116 395 2.6E-85 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VFU_RS11220 64a9aebd669ea363f62835e937814ec3 547 PANTHER PTHR11999 51 193 1.2E-156 T 21-04-2016 VFU_RS11220 64a9aebd669ea363f62835e937814ec3 547 PANTHER PTHR11999 209 545 1.2E-156 T 21-04-2016 VFU_RS11220 64a9aebd669ea363f62835e937814ec3 547 Gene3D G3DSA:3.90.1150.10 396 529 2.2E-39 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VFU_RS11220 64a9aebd669ea363f62835e937814ec3 547 SUPERFAMILY SSF53383 25 528 4.97E-115 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VFU_RS11220 64a9aebd669ea363f62835e937814ec3 547 PANTHER PTHR11999:SF5 51 193 1.2E-156 T 21-04-2016 VFU_RS11220 64a9aebd669ea363f62835e937814ec3 547 PANTHER PTHR11999:SF5 209 545 1.2E-156 T 21-04-2016 VFU_RS12045 22d689a31c4695d0359e72e0c6756824 616 Gene3D G3DSA:3.90.226.10 217 312 6.3E-60 T 21-04-2016 IPR029045 ClpP/crotonase-like domain VFU_RS12045 22d689a31c4695d0359e72e0c6756824 616 Gene3D G3DSA:3.90.226.10 468 552 9.8E-66 T 21-04-2016 IPR029045 ClpP/crotonase-like domain VFU_RS12045 22d689a31c4695d0359e72e0c6756824 616 Gene3D G3DSA:3.90.226.10 324 431 9.8E-66 T 21-04-2016 IPR029045 ClpP/crotonase-like domain VFU_RS12045 22d689a31c4695d0359e72e0c6756824 616 Gene3D G3DSA:3.90.226.10 30 174 6.3E-60 T 21-04-2016 IPR029045 ClpP/crotonase-like domain VFU_RS12045 22d689a31c4695d0359e72e0c6756824 616 PIRSF PIRSF001217 8 616 5.6E-224 T 21-04-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 VFU_RS12045 22d689a31c4695d0359e72e0c6756824 616 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 608 3.6E-191 T 21-04-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 VFU_RS12045 22d689a31c4695d0359e72e0c6756824 616 SUPERFAMILY SSF52096 324 439 2.98E-42 T 21-04-2016 IPR029045 ClpP/crotonase-like domain VFU_RS12045 22d689a31c4695d0359e72e0c6756824 616 SUPERFAMILY SSF52096 467 529 2.98E-42 T 21-04-2016 IPR029045 ClpP/crotonase-like domain VFU_RS12045 22d689a31c4695d0359e72e0c6756824 616 PANTHER PTHR33209:SF1 1 616 2.9E-220 T 21-04-2016 VFU_RS12045 22d689a31c4695d0359e72e0c6756824 616 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 327 540 3.8E-55 T 21-04-2016 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 VFU_RS12045 22d689a31c4695d0359e72e0c6756824 616 SUPERFAMILY SSF52096 209 284 3.38E-28 T 21-04-2016 IPR029045 ClpP/crotonase-like domain VFU_RS12045 22d689a31c4695d0359e72e0c6756824 616 SUPERFAMILY SSF52096 53 178 3.38E-28 T 21-04-2016 IPR029045 ClpP/crotonase-like domain VFU_RS12045 22d689a31c4695d0359e72e0c6756824 616 PANTHER PTHR33209 1 616 2.9E-220 T 21-04-2016 VFU_RS12045 22d689a31c4695d0359e72e0c6756824 616 Pfam PF01343 Peptidase family S49 391 541 5.5E-45 T 21-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 VFU_RS12045 22d689a31c4695d0359e72e0c6756824 616 Pfam PF01343 Peptidase family S49 138 293 2.3E-31 T 21-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 VFU_RS00345 d60a012a37606986269aeb91635ea0d7 617 PANTHER PTHR30108:SF1 1 468 4.3E-247 T 21-04-2016 VFU_RS00345 d60a012a37606986269aeb91635ea0d7 617 Gene3D G3DSA:1.20.5.570 584 617 1.9E-17 T 21-04-2016 VFU_RS00345 d60a012a37606986269aeb91635ea0d7 617 Gene3D G3DSA:3.40.1670.10 337 454 1.2E-49 T 21-04-2016 VFU_RS00345 d60a012a37606986269aeb91635ea0d7 617 Gene3D G3DSA:3.40.1670.10 480 582 1.3E-26 T 21-04-2016 VFU_RS00345 d60a012a37606986269aeb91635ea0d7 617 SUPERFAMILY SSF143968 323 460 3.01E-52 T 21-04-2016 VFU_RS00345 d60a012a37606986269aeb91635ea0d7 617 PANTHER PTHR30108 1 468 4.3E-247 T 21-04-2016 VFU_RS00345 d60a012a37606986269aeb91635ea0d7 617 SUPERFAMILY SSF143968 480 614 6.93E-30 T 21-04-2016 VFU_RS00345 d60a012a37606986269aeb91635ea0d7 617 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 480 568 2.3E-15 T 21-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 VFU_RS00345 d60a012a37606986269aeb91635ea0d7 617 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 431 1.1E-161 T 21-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 VFU_RS00345 d60a012a37606986269aeb91635ea0d7 617 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 455 1.5E-165 T 21-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 VFU_RS00345 d60a012a37606986269aeb91635ea0d7 617 SUPERFAMILY SSF50475 3 322 2.12E-123 T 21-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 VFU_RS04000 b9c8bb7286615f07a20bab34bc40d374 573 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 395 544 9.0E-50 T 21-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VFU_RS04000 b9c8bb7286615f07a20bab34bc40d374 573 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 568 1.3E-275 T 21-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VFU_RS04000 b9c8bb7286615f07a20bab34bc40d374 573 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 172 8.0E-60 T 21-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VFU_RS04000 b9c8bb7286615f07a20bab34bc40d374 573 Gene3D G3DSA:3.40.50.1220 191 357 5.5E-67 T 21-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VFU_RS04000 b9c8bb7286615f07a20bab34bc40d374 573 SUPERFAMILY SSF52518 1 182 8.84E-66 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold VFU_RS04000 b9c8bb7286615f07a20bab34bc40d374 573 PANTHER PTHR18968 3 573 0.0 T 21-04-2016 VFU_RS04000 b9c8bb7286615f07a20bab34bc40d374 573 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 197 331 1.8E-46 T 21-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 VFU_RS04000 b9c8bb7286615f07a20bab34bc40d374 573 Gene3D G3DSA:3.40.50.970 358 557 2.2E-75 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold VFU_RS04000 b9c8bb7286615f07a20bab34bc40d374 573 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 432 451 - T 21-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 VFU_RS04000 b9c8bb7286615f07a20bab34bc40d374 573 Gene3D G3DSA:3.40.50.970 3 178 9.2E-77 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold VFU_RS04000 b9c8bb7286615f07a20bab34bc40d374 573 SUPERFAMILY SSF52518 372 566 2.95E-68 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold VFU_RS04000 b9c8bb7286615f07a20bab34bc40d374 573 PANTHER PTHR18968:SF116 3 573 0.0 T 21-04-2016 VFU_RS04000 b9c8bb7286615f07a20bab34bc40d374 573 SUPERFAMILY SSF52467 190 363 1.55E-64 T 21-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VFU_RS05110 ff7f465293a2743f92ef11ec0d27ea67 451 Pfam PF00209 Sodium:neurotransmitter symporter family 7 134 2.0E-21 T 21-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VFU_RS05110 ff7f465293a2743f92ef11ec0d27ea67 451 Pfam PF00209 Sodium:neurotransmitter symporter family 151 449 1.2E-25 T 21-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VFU_RS05110 ff7f465293a2743f92ef11ec0d27ea67 451 PANTHER PTHR11616:SF167 3 450 1.4E-173 T 21-04-2016 VFU_RS05110 ff7f465293a2743f92ef11ec0d27ea67 451 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 15 36 2.9E-10 T 21-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VFU_RS05110 ff7f465293a2743f92ef11ec0d27ea67 451 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 311 330 2.9E-10 T 21-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VFU_RS05110 ff7f465293a2743f92ef11ec0d27ea67 451 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 44 63 2.9E-10 T 21-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VFU_RS05110 ff7f465293a2743f92ef11ec0d27ea67 451 SUPERFAMILY SSF161070 7 450 5.89E-118 T 21-04-2016 VFU_RS05110 ff7f465293a2743f92ef11ec0d27ea67 451 PANTHER PTHR11616 3 450 1.4E-173 T 21-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VFU_RS15295 50529302a1fb0226a70e717d29e2acc6 577 PANTHER PTHR11493 18 566 3.4E-271 T 21-04-2016 VFU_RS15295 50529302a1fb0226a70e717d29e2acc6 577 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 484 500 - T 21-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VFU_RS15295 50529302a1fb0226a70e717d29e2acc6 577 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 178 334 1.9E-45 T 21-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VFU_RS15295 50529302a1fb0226a70e717d29e2acc6 577 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 436 547 6.2E-5 T 21-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VFU_RS15295 50529302a1fb0226a70e717d29e2acc6 577 Gene3D G3DSA:3.90.480.10 79 151 2.2E-60 T 21-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VFU_RS15295 50529302a1fb0226a70e717d29e2acc6 577 Gene3D G3DSA:3.90.480.10 347 427 2.2E-60 T 21-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VFU_RS15295 50529302a1fb0226a70e717d29e2acc6 577 SUPERFAMILY SSF55124 351 427 9.65E-21 T 21-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VFU_RS15295 50529302a1fb0226a70e717d29e2acc6 577 PANTHER PTHR11493:SF47 18 566 3.4E-271 T 21-04-2016 VFU_RS15295 50529302a1fb0226a70e717d29e2acc6 577 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 15 577 58.192 T 21-04-2016 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VFU_RS15295 50529302a1fb0226a70e717d29e2acc6 577 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 358 419 6.7E-14 T 21-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VFU_RS15295 50529302a1fb0226a70e717d29e2acc6 577 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 84 141 1.1E-12 T 21-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VFU_RS15295 50529302a1fb0226a70e717d29e2acc6 577 SUPERFAMILY SSF55124 19 150 9.16E-27 T 21-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VFU_RS15295 50529302a1fb0226a70e717d29e2acc6 577 SUPERFAMILY SSF56014 434 566 1.57E-32 T 21-04-2016 VFU_RS15295 50529302a1fb0226a70e717d29e2acc6 577 Gene3D G3DSA:3.30.413.10 435 564 1.6E-33 T 21-04-2016 VFU_RS15295 50529302a1fb0226a70e717d29e2acc6 577 Gene3D G3DSA:3.30.413.10 154 345 4.6E-72 T 21-04-2016 VFU_RS15295 50529302a1fb0226a70e717d29e2acc6 577 SUPERFAMILY SSF56014 154 349 2.22E-60 T 21-04-2016 VFU_RS15295 50529302a1fb0226a70e717d29e2acc6 577 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 24 565 8.2E-283 T 21-04-2016 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VFU_RS15295 50529302a1fb0226a70e717d29e2acc6 577 PRINTS PR00397 Sirohaem Fe-binding site signature 484 502 4.7E-9 T 21-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VFU_RS15295 50529302a1fb0226a70e717d29e2acc6 577 PRINTS PR00397 Sirohaem Fe-binding site signature 435 453 4.7E-9 T 21-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VFU_RS04855 9f18b57f07967f03ec0e9e682db88869 329 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 228 245 - T 21-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 VFU_RS04855 9f18b57f07967f03ec0e9e682db88869 329 SUPERFAMILY SSF51445 2 281 1.9E-86 T 21-04-2016 IPR017853 Glycoside hydrolase superfamily VFU_RS04855 9f18b57f07967f03ec0e9e682db88869 329 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 13 283 2.8E-83 T 21-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 VFU_RS04855 9f18b57f07967f03ec0e9e682db88869 329 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 3 326 45.709 T 21-04-2016 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00544 VFU_RS04855 9f18b57f07967f03ec0e9e682db88869 329 Gene3D G3DSA:3.20.20.300 3 286 3.7E-91 T 21-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 VFU_RS04855 9f18b57f07967f03ec0e9e682db88869 329 PANTHER PTHR30480 4 326 6.9E-121 T 21-04-2016 VFU_RS04855 9f18b57f07967f03ec0e9e682db88869 329 PANTHER PTHR30480:SF7 4 326 6.9E-121 T 21-04-2016 VFU_RS06515 999106e20a17a0ee7caf460bdd26bda1 77 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.891 T 21-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 VFU_RS06515 999106e20a17a0ee7caf460bdd26bda1 77 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 21-04-2016 IPR006162 Phosphopantetheine attachment site VFU_RS06515 999106e20a17a0ee7caf460bdd26bda1 77 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 2.0E-37 T 21-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 VFU_RS06515 999106e20a17a0ee7caf460bdd26bda1 77 PANTHER PTHR20863 4 75 2.1E-31 T 21-04-2016 VFU_RS06515 999106e20a17a0ee7caf460bdd26bda1 77 Gene3D G3DSA:1.10.1200.10 3 75 3.3E-35 T 21-04-2016 IPR009081 Phosphopantetheine binding ACP domain VFU_RS06515 999106e20a17a0ee7caf460bdd26bda1 77 Pfam PF00550 Phosphopantetheine attachment site 6 73 2.1E-16 T 21-04-2016 IPR009081 Phosphopantetheine binding ACP domain VFU_RS06515 999106e20a17a0ee7caf460bdd26bda1 77 SUPERFAMILY SSF47336 2 76 5.23E-24 T 21-04-2016 IPR009081 Phosphopantetheine binding ACP domain VFU_RS12985 c0d7c51cde41452e4f2a8aa2d5a9652d 185 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 4 178 2.2E-79 T 21-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 VFU_RS12985 c0d7c51cde41452e4f2a8aa2d5a9652d 185 Pfam PF13242 HAD-hyrolase-like 107 176 1.1E-11 T 21-04-2016 VFU_RS12985 c0d7c51cde41452e4f2a8aa2d5a9652d 185 SUPERFAMILY SSF56784 4 181 4.35E-48 T 21-04-2016 IPR023214 HAD-like domain VFU_RS12985 c0d7c51cde41452e4f2a8aa2d5a9652d 185 PANTHER PTHR23133 1 183 7.9E-70 T 21-04-2016 VFU_RS12985 c0d7c51cde41452e4f2a8aa2d5a9652d 185 PANTHER PTHR23133:SF3 1 183 7.9E-70 T 21-04-2016 VFU_RS12985 c0d7c51cde41452e4f2a8aa2d5a9652d 185 Gene3D G3DSA:3.40.50.1000 3 181 1.1E-59 T 21-04-2016 IPR023214 HAD-like domain VFU_RS12985 c0d7c51cde41452e4f2a8aa2d5a9652d 185 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 152 4.1E-39 T 21-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 VFU_RS12985 c0d7c51cde41452e4f2a8aa2d5a9652d 185 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 5 154 2.4E-36 T 21-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA VFU_RS12985 c0d7c51cde41452e4f2a8aa2d5a9652d 185 PIRSF PIRSF004682 1 184 4.2E-63 T 21-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 VFU_RS12770 58d0a5c33590860e2aff944f52bbd63a 669 SMART SM00278 446 465 100.0 T 21-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VFU_RS12770 58d0a5c33590860e2aff944f52bbd63a 669 SMART SM00278 544 563 180.0 T 21-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VFU_RS12770 58d0a5c33590860e2aff944f52bbd63a 669 SMART SM00278 480 499 0.27 T 21-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VFU_RS12770 58d0a5c33590860e2aff944f52bbd63a 669 SUPERFAMILY SSF47781 404 584 6.3E-60 T 21-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 VFU_RS12770 58d0a5c33590860e2aff944f52bbd63a 669 Gene3D G3DSA:2.40.50.140 319 391 2.4E-35 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS12770 58d0a5c33590860e2aff944f52bbd63a 669 SUPERFAMILY SSF50249 318 399 3.43E-29 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS12770 58d0a5c33590860e2aff944f52bbd63a 669 Gene3D G3DSA:3.40.50.10190 592 669 1.9E-24 T 21-04-2016 IPR001357 BRCT domain VFU_RS12770 58d0a5c33590860e2aff944f52bbd63a 669 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 594 668 7.4E-12 T 21-04-2016 IPR001357 BRCT domain VFU_RS12770 58d0a5c33590860e2aff944f52bbd63a 669 Gene3D G3DSA:1.10.150.20 435 501 4.9E-26 T 21-04-2016 VFU_RS12770 58d0a5c33590860e2aff944f52bbd63a 669 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 407 434 1.2E-9 T 21-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 VFU_RS12770 58d0a5c33590860e2aff944f52bbd63a 669 Pfam PF14520 Helix-hairpin-helix domain 446 500 1.1E-5 T 21-04-2016 VFU_RS12770 58d0a5c33590860e2aff944f52bbd63a 669 SMART SM00292 594 669 3.8E-10 T 21-04-2016 IPR001357 BRCT domain VFU_RS12770 58d0a5c33590860e2aff944f52bbd63a 669 Hamap MF_01588 DNA ligase [ligA]. 2 668 53.933 T 21-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 VFU_RS12770 58d0a5c33590860e2aff944f52bbd63a 669 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 322 398 6.2E-36 T 21-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 VFU_RS12770 58d0a5c33590860e2aff944f52bbd63a 669 Gene3D G3DSA:1.10.287.610 2 67 1.3E-29 T 21-04-2016 VFU_RS12770 58d0a5c33590860e2aff944f52bbd63a 669 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 331 346 - T 21-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site VFU_RS12770 58d0a5c33590860e2aff944f52bbd63a 669 Pfam PF12826 Helix-hairpin-helix motif 510 573 6.3E-23 T 21-04-2016 VFU_RS12770 58d0a5c33590860e2aff944f52bbd63a 669 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 3 318 4.5E-135 T 21-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 VFU_RS12770 58d0a5c33590860e2aff944f52bbd63a 669 SMART SM00532 3 448 3.6E-281 T 21-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 VFU_RS12770 58d0a5c33590860e2aff944f52bbd63a 669 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 115 144 - T 21-04-2016 IPR018239 NAD-dependent DNA ligase, active site VFU_RS12770 58d0a5c33590860e2aff944f52bbd63a 669 SUPERFAMILY SSF52113 592 668 5.23E-18 T 21-04-2016 IPR001357 BRCT domain VFU_RS12770 58d0a5c33590860e2aff944f52bbd63a 669 PIRSF PIRSF001604 1 669 8.2E-254 T 21-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 VFU_RS12770 58d0a5c33590860e2aff944f52bbd63a 669 PANTHER PTHR23389:SF9 1 532 2.2E-207 T 21-04-2016 VFU_RS12770 58d0a5c33590860e2aff944f52bbd63a 669 Gene3D G3DSA:3.30.470.30 119 252 6.8E-51 T 21-04-2016 VFU_RS12770 58d0a5c33590860e2aff944f52bbd63a 669 PANTHER PTHR23389 1 532 2.2E-207 T 21-04-2016 VFU_RS12770 58d0a5c33590860e2aff944f52bbd63a 669 SUPERFAMILY SSF56091 2 316 7.63E-125 T 21-04-2016 VFU_RS12770 58d0a5c33590860e2aff944f52bbd63a 669 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 11 664 4.8E-267 T 21-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 VFU_RS12770 58d0a5c33590860e2aff944f52bbd63a 669 Gene3D G3DSA:1.10.150.20 504 584 1.3E-30 T 21-04-2016 VFU_RS05095 2d540602b5f5bb2320d53139beffb2c5 354 PANTHER PTHR11076:SF32 1 354 1.4E-195 T 21-04-2016 VFU_RS05095 2d540602b5f5bb2320d53139beffb2c5 354 Pfam PF00817 impB/mucB/samB family 11 158 8.0E-50 T 21-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS05095 2d540602b5f5bb2320d53139beffb2c5 354 SUPERFAMILY SSF56672 3 238 9.78E-92 T 21-04-2016 VFU_RS05095 2d540602b5f5bb2320d53139beffb2c5 354 Gene3D G3DSA:3.30.70.270 70 168 2.0E-33 T 21-04-2016 VFU_RS05095 2d540602b5f5bb2320d53139beffb2c5 354 Pfam PF11799 impB/mucB/samB family C-terminal domain 241 340 2.5E-5 T 21-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS05095 2d540602b5f5bb2320d53139beffb2c5 354 Gene3D G3DSA:3.30.1490.100 241 354 2.3E-40 T 21-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS05095 2d540602b5f5bb2320d53139beffb2c5 354 Hamap MF_01113 DNA polymerase IV [dinB]. 5 353 36.82 T 21-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS05095 2d540602b5f5bb2320d53139beffb2c5 354 SUPERFAMILY SSF100879 245 353 4.32E-24 T 21-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS05095 2d540602b5f5bb2320d53139beffb2c5 354 Gene3D G3DSA:1.10.150.20 169 238 1.1E-21 T 21-04-2016 VFU_RS05095 2d540602b5f5bb2320d53139beffb2c5 354 PANTHER PTHR11076 1 354 1.4E-195 T 21-04-2016 VFU_RS02910 0ccb9e00e979f88daf1e5be13f09e0ba 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.3E-20 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VFU_RS02910 0ccb9e00e979f88daf1e5be13f09e0ba 335 SUPERFAMILY SSF47413 1 59 1.69E-17 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VFU_RS02910 0ccb9e00e979f88daf1e5be13f09e0ba 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VFU_RS02910 0ccb9e00e979f88daf1e5be13f09e0ba 335 SMART SM00354 1 71 1.2E-33 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VFU_RS02910 0ccb9e00e979f88daf1e5be13f09e0ba 335 PANTHER PTHR30146 1 335 3.3E-149 T 21-04-2016 VFU_RS02910 0ccb9e00e979f88daf1e5be13f09e0ba 335 PANTHER PTHR30146:SF4 1 335 3.3E-149 T 21-04-2016 VFU_RS02910 0ccb9e00e979f88daf1e5be13f09e0ba 335 SUPERFAMILY SSF53822 60 332 9.11E-90 T 21-04-2016 IPR028082 Periplasmic binding protein-like I VFU_RS02910 0ccb9e00e979f88daf1e5be13f09e0ba 335 Gene3D G3DSA:3.40.50.2300 58 167 2.9E-33 T 21-04-2016 VFU_RS02910 0ccb9e00e979f88daf1e5be13f09e0ba 335 Gene3D G3DSA:3.40.50.2300 168 330 1.2E-64 T 21-04-2016 VFU_RS02910 0ccb9e00e979f88daf1e5be13f09e0ba 335 Gene3D G3DSA:1.10.260.40 1 57 1.7E-24 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VFU_RS02910 0ccb9e00e979f88daf1e5be13f09e0ba 335 Pfam PF13377 Periplasmic binding protein-like domain 168 328 2.1E-41 T 21-04-2016 VFU_RS15175 355dd9f5e459d636c8a37a4194afad07 574 SUPERFAMILY SSF52540 180 559 1.27E-92 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS15175 355dd9f5e459d636c8a37a4194afad07 574 SMART SM00382 314 435 0.0047 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS15175 355dd9f5e459d636c8a37a4194afad07 574 PANTHER PTHR30258:SF11 1 571 0.0 T 21-04-2016 VFU_RS15175 355dd9f5e459d636c8a37a4194afad07 574 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 42 147 6.3E-21 T 21-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 VFU_RS15175 355dd9f5e459d636c8a37a4194afad07 574 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 381 395 - T 21-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VFU_RS15175 355dd9f5e459d636c8a37a4194afad07 574 PANTHER PTHR30258 1 571 0.0 T 21-04-2016 VFU_RS15175 355dd9f5e459d636c8a37a4194afad07 574 Pfam PF00437 Type II/IV secretion system protein 191 453 4.7E-75 T 21-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VFU_RS15175 355dd9f5e459d636c8a37a4194afad07 574 Gene3D G3DSA:3.40.50.300 291 559 3.1E-89 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS15175 355dd9f5e459d636c8a37a4194afad07 574 Gene3D G3DSA:3.30.450.90 160 286 5.9E-46 T 21-04-2016 VFU_RS15175 355dd9f5e459d636c8a37a4194afad07 574 SUPERFAMILY SSF160246 4 145 2.51E-37 T 21-04-2016 VFU_RS03425 892dae1d364999aa39ba6e63780fcf0b 192 Pfam PF04225 Opacity-associated protein A LysM-like domain 109 192 1.0E-37 T 21-04-2016 IPR007340 Opacity-associated protein A VFU_RS03425 892dae1d364999aa39ba6e63780fcf0b 192 Pfam PF08525 Opacity-associated protein A N-terminal motif 40 66 5.2E-8 T 21-04-2016 IPR013731 Opacity-associated protein A, N-terminal VFU_RS19685 42752d4203292f153cb857f7711f1a74 338 PANTHER PTHR37469 202 338 7.6E-161 T 21-04-2016 VFU_RS19685 42752d4203292f153cb857f7711f1a74 338 SUPERFAMILY SSF74650 1 52 2.23E-6 T 21-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 VFU_RS19685 42752d4203292f153cb857f7711f1a74 338 PANTHER PTHR37469:SF1 202 338 7.6E-161 T 21-04-2016 VFU_RS19685 42752d4203292f153cb857f7711f1a74 338 Gene3D G3DSA:2.70.98.40 1 108 5.7E-19 T 21-04-2016 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 VFU_RS19685 42752d4203292f153cb857f7711f1a74 338 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 79 338 2.2E-115 T 21-04-2016 IPR033432 Glycosyl hydrolase 36, catalytic domain VFU_RS19685 42752d4203292f153cb857f7711f1a74 338 PANTHER PTHR37469 1 176 7.6E-161 T 21-04-2016 VFU_RS19685 42752d4203292f153cb857f7711f1a74 338 SUPERFAMILY SSF48208 56 337 7.14E-53 T 21-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 VFU_RS19685 42752d4203292f153cb857f7711f1a74 338 PANTHER PTHR37469:SF1 1 176 7.6E-161 T 21-04-2016 VFU_RS19685 42752d4203292f153cb857f7711f1a74 338 Pfam PF06165 Glycosyltransferase family 36 1 50 4.3E-10 T 21-04-2016 IPR010383 Glycosyl hydrolase 94 VFU_RS04690 3bc2a706ed0c73fb2800893c51a0dace 147 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 13 143 5.9E-37 T 21-04-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 VFU_RS04690 3bc2a706ed0c73fb2800893c51a0dace 147 Pfam PF00583 Acetyltransferase (GNAT) family 49 122 2.3E-14 T 21-04-2016 IPR000182 GNAT domain GO:0008080 VFU_RS04690 3bc2a706ed0c73fb2800893c51a0dace 147 Gene3D G3DSA:3.40.630.30 2 144 2.1E-30 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase VFU_RS04690 3bc2a706ed0c73fb2800893c51a0dace 147 SUPERFAMILY SSF55729 1 145 9.79E-32 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase VFU_RS04690 3bc2a706ed0c73fb2800893c51a0dace 147 PANTHER PTHR23091:SF247 1 143 2.6E-28 T 21-04-2016 VFU_RS04690 3bc2a706ed0c73fb2800893c51a0dace 147 PANTHER PTHR23091 1 143 2.6E-28 T 21-04-2016 VFU_RS04345 166229504eb14045ad5c0c380dce8d85 222 PANTHER PTHR11002 1 207 3.0E-134 T 21-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VFU_RS04345 166229504eb14045ad5c0c380dce8d85 222 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 21-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VFU_RS04345 166229504eb14045ad5c0c380dce8d85 222 Gene3D G3DSA:3.40.1050.10 1 214 1.0E-78 T 21-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VFU_RS04345 166229504eb14045ad5c0c380dce8d85 222 SUPERFAMILY SSF53056 2 214 8.5E-75 T 21-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VFU_RS04345 166229504eb14045ad5c0c380dce8d85 222 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 21-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VFU_RS04345 166229504eb14045ad5c0c380dce8d85 222 Pfam PF00484 Carbonic anhydrase 38 188 6.7E-49 T 21-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VFU_RS04345 166229504eb14045ad5c0c380dce8d85 222 SMART SM00947 30 192 2.6E-66 T 21-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VFU_RS04345 166229504eb14045ad5c0c380dce8d85 222 PANTHER PTHR11002:SF11 1 207 3.0E-134 T 21-04-2016 VFU_RS00180 f458af5769dcd042fc1c045234e175c1 510 PANTHER PTHR31637 4 509 1.5E-285 T 21-04-2016 VFU_RS00180 f458af5769dcd042fc1c045234e175c1 510 PIRSF PIRSF001492 1 510 3.6E-203 T 21-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VFU_RS00180 f458af5769dcd042fc1c045234e175c1 510 SUPERFAMILY SSF64158 78 308 3.27E-82 T 21-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VFU_RS00180 f458af5769dcd042fc1c045234e175c1 510 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 83 297 9.1E-80 T 21-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VFU_RS00180 f458af5769dcd042fc1c045234e175c1 510 PANTHER PTHR31637:SF0 4 509 1.5E-285 T 21-04-2016 VFU_RS00180 f458af5769dcd042fc1c045234e175c1 510 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 5 509 1.1E-227 T 21-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VFU_RS00180 f458af5769dcd042fc1c045234e175c1 510 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 5 510 49.712 T 21-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VFU_RS00180 f458af5769dcd042fc1c045234e175c1 510 Pfam PF01676 Metalloenzyme superfamily 5 494 6.1E-81 T 21-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 VFU_RS00180 f458af5769dcd042fc1c045234e175c1 510 Gene3D G3DSA:3.40.1450.10 79 308 8.5E-95 T 21-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VFU_RS00180 f458af5769dcd042fc1c045234e175c1 510 SUPERFAMILY SSF53649 5 78 1.15E-76 T 21-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VFU_RS00180 f458af5769dcd042fc1c045234e175c1 510 SUPERFAMILY SSF53649 306 509 1.15E-76 T 21-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VFU_RS00180 f458af5769dcd042fc1c045234e175c1 510 Gene3D G3DSA:3.40.720.10 313 509 1.5E-88 T 21-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VFU_RS00180 f458af5769dcd042fc1c045234e175c1 510 Gene3D G3DSA:3.40.720.10 5 78 1.5E-88 T 21-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VFU_RS06205 f21850adcc70fbc919861c4aa733a809 197 SUPERFAMILY SSF54593 2 196 6.19E-63 T 21-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VFU_RS06205 f21850adcc70fbc919861c4aa733a809 197 Gene3D G3DSA:3.10.180.10 3 197 2.0E-67 T 21-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VFU_RS06205 f21850adcc70fbc919861c4aa733a809 197 Pfam PF06185 YecM protein 14 196 2.1E-66 T 21-04-2016 IPR010393 Protein of unknown function DUF991 VFU_RS06205 f21850adcc70fbc919861c4aa733a809 197 PANTHER PTHR37519 4 197 8.7E-81 T 21-04-2016 VFU_RS06205 f21850adcc70fbc919861c4aa733a809 197 PANTHER PTHR37519:SF1 4 197 8.7E-81 T 21-04-2016 VFU_RS07650 cd3361edfaa6757878aa4b139b023ce6 449 Gene3D G3DSA:1.10.3710.10 349 447 1.5E-34 T 21-04-2016 VFU_RS07650 cd3361edfaa6757878aa4b139b023ce6 449 Pfam PF16193 AAA C-terminal domain 189 268 4.8E-19 T 21-04-2016 IPR032423 AAA ATPase, C-terminal domain VFU_RS07650 cd3361edfaa6757878aa4b139b023ce6 449 PANTHER PTHR13779 12 449 1.1E-199 T 21-04-2016 VFU_RS07650 cd3361edfaa6757878aa4b139b023ce6 449 Gene3D G3DSA:3.40.50.300 13 154 1.0E-33 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS07650 cd3361edfaa6757878aa4b139b023ce6 449 Pfam PF12002 MgsA AAA+ ATPase C terminal 269 435 1.8E-66 T 21-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal VFU_RS07650 cd3361edfaa6757878aa4b139b023ce6 449 PANTHER PTHR13779:SF7 12 449 1.1E-199 T 21-04-2016 VFU_RS07650 cd3361edfaa6757878aa4b139b023ce6 449 SUPERFAMILY SSF48019 253 435 4.14E-73 T 21-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 VFU_RS07650 cd3361edfaa6757878aa4b139b023ce6 449 SUPERFAMILY SSF52540 10 235 6.24E-45 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS07650 cd3361edfaa6757878aa4b139b023ce6 449 Gene3D G3DSA:1.10.8.60 155 243 1.4E-7 T 21-04-2016 VFU_RS07650 cd3361edfaa6757878aa4b139b023ce6 449 Gene3D G3DSA:1.20.272.10 250 348 4.0E-42 T 21-04-2016 VFU_RS07650 cd3361edfaa6757878aa4b139b023ce6 449 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 54 159 1.4E-16 T 21-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VFU_RS07650 cd3361edfaa6757878aa4b139b023ce6 449 SMART SM00382 50 166 1.3E-13 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS10500 f5684264225eb6cf3ccc2f282e778134 106 Gene3D G3DSA:3.10.450.140 6 105 3.4E-44 T 21-04-2016 IPR007376 dsDNA mimic, putative VFU_RS10500 f5684264225eb6cf3ccc2f282e778134 106 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 18 104 3.0E-41 T 21-04-2016 IPR007376 dsDNA mimic, putative VFU_RS10500 f5684264225eb6cf3ccc2f282e778134 106 SUPERFAMILY SSF102816 3 105 2.09E-46 T 21-04-2016 IPR007376 dsDNA mimic, putative VFU_RS10500 f5684264225eb6cf3ccc2f282e778134 106 Hamap MF_00680 UPF0263 protein YciU [yciU]. 1 106 35.354 T 21-04-2016 IPR007376 dsDNA mimic, putative VFU_RS10500 f5684264225eb6cf3ccc2f282e778134 106 PIRSF PIRSF004916 1 105 3.0E-51 T 21-04-2016 IPR007376 dsDNA mimic, putative VFU_RS10500 f5684264225eb6cf3ccc2f282e778134 106 Pfam PF04269 Protein of unknown function, DUF440 5 105 4.0E-44 T 21-04-2016 IPR007376 dsDNA mimic, putative VFU_RS12570 e0579698a8d46ac05f82b96cf75a270c 138 SUPERFAMILY SSF54593 2 130 1.01E-36 T 21-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VFU_RS12570 e0579698a8d46ac05f82b96cf75a270c 138 Gene3D G3DSA:3.10.180.10 5 131 1.3E-47 T 21-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VFU_RS12570 e0579698a8d46ac05f82b96cf75a270c 138 PANTHER PTHR10374 1 130 1.4E-61 T 21-04-2016 VFU_RS12570 e0579698a8d46ac05f82b96cf75a270c 138 ProSitePatterns PS00935 Glyoxalase I signature 2. 72 84 - T 21-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 VFU_RS12570 e0579698a8d46ac05f82b96cf75a270c 138 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 3 136 2.3E-68 T 21-04-2016 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 VFU_RS12570 e0579698a8d46ac05f82b96cf75a270c 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 126 1.1E-23 T 21-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VFU_RS12570 e0579698a8d46ac05f82b96cf75a270c 138 ProSitePatterns PS00934 Glyoxalase I signature 1. 8 29 - T 21-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 VFU_RS11200 e4abd80065196ea9c6c361fe9259c8d1 197 Gene3D G3DSA:1.10.150.20 114 196 6.6E-28 T 21-04-2016 VFU_RS11200 e4abd80065196ea9c6c361fe9259c8d1 197 Gene3D G3DSA:3.30.1460.30 2 99 3.6E-25 T 21-04-2016 IPR007076 TfoX, N-terminal VFU_RS11200 e4abd80065196ea9c6c361fe9259c8d1 197 PANTHER PTHR36121 1 192 6.4E-45 T 21-04-2016 VFU_RS11200 e4abd80065196ea9c6c361fe9259c8d1 197 SUPERFAMILY SSF159894 4 102 1.02E-24 T 21-04-2016 VFU_RS11200 e4abd80065196ea9c6c361fe9259c8d1 197 Pfam PF04993 TfoX N-terminal domain 14 99 4.8E-21 T 21-04-2016 IPR007076 TfoX, N-terminal VFU_RS11200 e4abd80065196ea9c6c361fe9259c8d1 197 PIRSF PIRSF028788 12 197 8.3E-34 T 21-04-2016 IPR026256 Transcriptional regulator, TfoX/Sxy-type VFU_RS11200 e4abd80065196ea9c6c361fe9259c8d1 197 Pfam PF04994 TfoX C-terminal domain 114 192 9.0E-27 T 21-04-2016 IPR007077 TfoX, C-terminal VFU_RS11200 e4abd80065196ea9c6c361fe9259c8d1 197 PANTHER PTHR36121:SF1 1 192 6.4E-45 T 21-04-2016 VFU_RS03970 0602ea235a29021bad942f1fc4164f3a 516 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 21-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 VFU_RS03970 0602ea235a29021bad942f1fc4164f3a 516 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 498 1.8E-30 T 21-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 VFU_RS03970 0602ea235a29021bad942f1fc4164f3a 516 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 508 42.392 T 21-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 VFU_RS03970 0602ea235a29021bad942f1fc4164f3a 516 PANTHER PTHR10277 1 507 7.8E-248 T 21-04-2016 VFU_RS03970 0602ea235a29021bad942f1fc4164f3a 516 SMART SM00917 369 499 2.1E-28 T 21-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 VFU_RS03970 0602ea235a29021bad942f1fc4164f3a 516 SUPERFAMILY SSF110921 393 498 1.02E-20 T 21-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 VFU_RS03970 0602ea235a29021bad942f1fc4164f3a 516 Pfam PF00682 HMGL-like 4 273 4.1E-100 T 21-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 VFU_RS03970 0602ea235a29021bad942f1fc4164f3a 516 Gene3D G3DSA:3.20.20.70 1 347 3.8E-145 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS03970 0602ea235a29021bad942f1fc4164f3a 516 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 496 2.8E-237 T 21-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 VFU_RS03970 0602ea235a29021bad942f1fc4164f3a 516 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 21-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 VFU_RS03970 0602ea235a29021bad942f1fc4164f3a 516 PANTHER PTHR10277:SF9 1 507 7.8E-248 T 21-04-2016 VFU_RS03970 0602ea235a29021bad942f1fc4164f3a 516 SUPERFAMILY SSF51569 1 291 7.87E-100 T 21-04-2016 VFU_RS09915 60318da5492081d4dfd6158f40d6384d 438 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 141 263 1.0E-11 T 21-04-2016 IPR000014 PAS domain VFU_RS09915 60318da5492081d4dfd6158f40d6384d 438 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 35 139 2.3E-7 T 21-04-2016 IPR000014 PAS domain VFU_RS09915 60318da5492081d4dfd6158f40d6384d 438 PANTHER PTHR24422:SF10 1 436 1.8E-97 T 21-04-2016 VFU_RS09915 60318da5492081d4dfd6158f40d6384d 438 Gene3D G3DSA:3.30.450.20 154 254 4.8E-17 T 21-04-2016 VFU_RS09915 60318da5492081d4dfd6158f40d6384d 438 Gene3D G3DSA:3.30.450.20 35 134 7.5E-14 T 21-04-2016 VFU_RS09915 60318da5492081d4dfd6158f40d6384d 438 SUPERFAMILY SSF58104 249 435 2.49E-51 T 21-04-2016 VFU_RS09915 60318da5492081d4dfd6158f40d6384d 438 PANTHER PTHR24422 1 436 1.8E-97 T 21-04-2016 VFU_RS09915 60318da5492081d4dfd6158f40d6384d 438 Pfam PF13426 PAS domain 37 134 5.8E-8 T 21-04-2016 IPR000014 PAS domain VFU_RS09915 60318da5492081d4dfd6158f40d6384d 438 SUPERFAMILY SSF55785 154 259 2.09E-18 T 21-04-2016 IPR000014 PAS domain VFU_RS09915 60318da5492081d4dfd6158f40d6384d 438 SMART SM00283 248 435 3.4E-17 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VFU_RS09915 60318da5492081d4dfd6158f40d6384d 438 Pfam PF08447 PAS fold 166 252 2.2E-11 T 21-04-2016 IPR013655 PAS fold-3 GO:0005515 VFU_RS09915 60318da5492081d4dfd6158f40d6384d 438 Gene3D G3DSA:1.10.287.950 255 435 7.3E-46 T 21-04-2016 VFU_RS09915 60318da5492081d4dfd6158f40d6384d 438 SUPERFAMILY SSF55785 35 134 1.41E-11 T 21-04-2016 IPR000014 PAS domain VFU_RS09915 60318da5492081d4dfd6158f40d6384d 438 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 288 434 2.7E-38 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VFU_RS04005 e98cd6a87f4f2826692c25280fc875c7 165 Pfam PF10369 Small subunit of acetolactate synthase 85 159 9.2E-25 T 21-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VFU_RS04005 e98cd6a87f4f2826692c25280fc875c7 165 PANTHER PTHR30239 1 163 3.0E-87 T 21-04-2016 VFU_RS04005 e98cd6a87f4f2826692c25280fc875c7 165 Pfam PF13710 ACT domain 12 74 2.9E-18 T 21-04-2016 VFU_RS04005 e98cd6a87f4f2826692c25280fc875c7 165 Gene3D G3DSA:3.30.70.260 1 79 5.4E-37 T 21-04-2016 VFU_RS04005 e98cd6a87f4f2826692c25280fc875c7 165 Gene3D G3DSA:3.30.70.1150 84 163 9.3E-28 T 21-04-2016 VFU_RS04005 e98cd6a87f4f2826692c25280fc875c7 165 SUPERFAMILY SSF55021 80 163 7.48E-26 T 21-04-2016 VFU_RS04005 e98cd6a87f4f2826692c25280fc875c7 165 SUPERFAMILY SSF55021 3 77 3.15E-22 T 21-04-2016 VFU_RS04005 e98cd6a87f4f2826692c25280fc875c7 165 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 4 76 2.0E-33 T 21-04-2016 VFU_RS04005 e98cd6a87f4f2826692c25280fc875c7 165 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 3 160 1.5E-61 T 21-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VFU_RS11435 f83cba6fd2c852461e585c35d43f8972 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 47.93 T 21-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VFU_RS11435 f83cba6fd2c852461e585c35d43f8972 173 PANTHER PTHR30194 1 169 1.0E-72 T 21-04-2016 VFU_RS11435 f83cba6fd2c852461e585c35d43f8972 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 155 1.1E-75 T 21-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VFU_RS11435 f83cba6fd2c852461e585c35d43f8972 173 SUPERFAMILY SSF53098 3 156 2.4E-55 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VFU_RS11435 f83cba6fd2c852461e585c35d43f8972 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 4.9E-63 T 21-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VFU_RS11435 f83cba6fd2c852461e585c35d43f8972 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 4.5E-42 T 21-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VFU_RS11435 f83cba6fd2c852461e585c35d43f8972 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 4.5E-42 T 21-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VFU_RS11435 f83cba6fd2c852461e585c35d43f8972 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 4.5E-42 T 21-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VFU_RS11435 f83cba6fd2c852461e585c35d43f8972 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 4.5E-42 T 21-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VFU_RS11435 f83cba6fd2c852461e585c35d43f8972 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 4.5E-42 T 21-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VFU_RS11435 f83cba6fd2c852461e585c35d43f8972 173 Gene3D G3DSA:3.30.420.10 3 156 1.5E-67 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VFU_RS11435 f83cba6fd2c852461e585c35d43f8972 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 21-04-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 VFU_RS13790 e41e53d588ad19aa9b0ba7a01c3b0d7d 343 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 2 340 46.219 T 21-04-2016 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 VFU_RS13790 e41e53d588ad19aa9b0ba7a01c3b0d7d 343 SUPERFAMILY SSF51161 90 323 1.94E-35 T 21-04-2016 IPR011004 Trimeric LpxA-like VFU_RS13790 e41e53d588ad19aa9b0ba7a01c3b0d7d 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 253 285 4.6E-13 T 21-04-2016 IPR001451 Hexapeptide repeat VFU_RS13790 e41e53d588ad19aa9b0ba7a01c3b0d7d 343 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 131 171 8.2E-16 T 21-04-2016 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117|UniPathway: UPA00034 VFU_RS13790 e41e53d588ad19aa9b0ba7a01c3b0d7d 343 TIGRFAM TIGR03536 DapD_gpp: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 343 4.8E-178 T 21-04-2016 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria KEGG: 00300+2.3.1.117|UniPathway: UPA00034 VFU_RS13790 e41e53d588ad19aa9b0ba7a01c3b0d7d 343 Gene3D G3DSA:3.30.60.70 131 171 8.1E-22 T 21-04-2016 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117|UniPathway: UPA00034 VFU_RS13790 e41e53d588ad19aa9b0ba7a01c3b0d7d 343 Gene3D G3DSA:2.160.10.10 173 340 2.8E-34 T 21-04-2016 VFU_RS11550 48490f6b3779545e3e39c4c2a0d40cda 166 Gene3D G3DSA:1.10.287.680 1 52 6.5E-30 T 21-04-2016 IPR023145 YfbU, helix-hairpin domain VFU_RS11550 48490f6b3779545e3e39c4c2a0d40cda 166 Gene3D G3DSA:1.10.3190.10 53 166 2.3E-46 T 21-04-2016 IPR023146 YfbU, alpha-helical bundle domain VFU_RS11550 48490f6b3779545e3e39c4c2a0d40cda 166 PIRSF PIRSF006272 1 166 5.5E-76 T 21-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU VFU_RS11550 48490f6b3779545e3e39c4c2a0d40cda 166 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 166 37.46 T 21-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU VFU_RS11550 48490f6b3779545e3e39c4c2a0d40cda 166 Pfam PF03887 YfbU domain 1 166 1.4E-68 T 21-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU VFU_RS11550 48490f6b3779545e3e39c4c2a0d40cda 166 SUPERFAMILY SSF116960 1 166 1.14E-62 T 21-04-2016 VFU_RS11550 48490f6b3779545e3e39c4c2a0d40cda 166 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 166 1.0E-77 T 21-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU VFU_RS08620 6d87c89df0fb7b3a6e9872a7c8fee938 627 PANTHER PTHR32089:SF59 1 627 0.0 T 21-04-2016 VFU_RS08620 6d87c89df0fb7b3a6e9872a7c8fee938 627 Pfam PF02743 Cache domain 42 258 2.7E-30 T 21-04-2016 IPR033479 Double Cache domain 1 VFU_RS08620 6d87c89df0fb7b3a6e9872a7c8fee938 627 Gene3D G3DSA:1.10.287.950 380 597 3.7E-56 T 21-04-2016 VFU_RS08620 6d87c89df0fb7b3a6e9872a7c8fee938 627 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 273 293 8.29E-22 T 21-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VFU_RS08620 6d87c89df0fb7b3a6e9872a7c8fee938 627 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 492 521 8.29E-22 T 21-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VFU_RS08620 6d87c89df0fb7b3a6e9872a7c8fee938 627 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 463 490 8.29E-22 T 21-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VFU_RS08620 6d87c89df0fb7b3a6e9872a7c8fee938 627 SMART SM00283 358 626 3.1E-64 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VFU_RS08620 6d87c89df0fb7b3a6e9872a7c8fee938 627 Gene3D G3DSA:3.30.450.20 134 273 5.9E-31 T 21-04-2016 VFU_RS08620 6d87c89df0fb7b3a6e9872a7c8fee938 627 PANTHER PTHR32089 1 627 0.0 T 21-04-2016 VFU_RS08620 6d87c89df0fb7b3a6e9872a7c8fee938 627 SUPERFAMILY SSF103190 89 175 2.15E-11 T 21-04-2016 IPR029151 Periplasmic sensor domain-like VFU_RS08620 6d87c89df0fb7b3a6e9872a7c8fee938 627 Pfam PF00672 HAMP domain 278 346 1.6E-12 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS08620 6d87c89df0fb7b3a6e9872a7c8fee938 627 SUPERFAMILY SSF58104 318 627 2.09E-76 T 21-04-2016 VFU_RS08620 6d87c89df0fb7b3a6e9872a7c8fee938 627 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 429 625 2.1E-47 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VFU_RS08620 6d87c89df0fb7b3a6e9872a7c8fee938 627 SMART SM00304 353 403 15.0 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS08620 6d87c89df0fb7b3a6e9872a7c8fee938 627 SMART SM00304 296 350 3.5E-10 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS02375 5593a44b5cc498cfa1f07f1f2d2a5ce6 106 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 106 33.303 T 21-04-2016 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 VFU_RS02375 5593a44b5cc498cfa1f07f1f2d2a5ce6 106 Gene3D G3DSA:3.40.250.10 2 104 1.2E-29 T 21-04-2016 IPR001763 Rhodanese-like domain VFU_RS02375 5593a44b5cc498cfa1f07f1f2d2a5ce6 106 SMART SM00450 7 102 3.0E-18 T 21-04-2016 IPR001763 Rhodanese-like domain VFU_RS02375 5593a44b5cc498cfa1f07f1f2d2a5ce6 106 PANTHER PTHR12231 18 104 6.5E-15 T 21-04-2016 VFU_RS02375 5593a44b5cc498cfa1f07f1f2d2a5ce6 106 Pfam PF00581 Rhodanese-like domain 13 98 8.7E-12 T 21-04-2016 IPR001763 Rhodanese-like domain VFU_RS02375 5593a44b5cc498cfa1f07f1f2d2a5ce6 106 SUPERFAMILY SSF52821 1 105 2.1E-29 T 21-04-2016 IPR001763 Rhodanese-like domain VFU_RS01650 82562df9371c8aae42f0aaf89e44d6b4 540 Pfam PF14849 YidC periplasmic domain 66 340 7.7E-85 T 21-04-2016 IPR028053 Membrane insertase YidC, N-terminal VFU_RS01650 82562df9371c8aae42f0aaf89e44d6b4 540 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 350 529 7.3E-73 T 21-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal VFU_RS01650 82562df9371c8aae42f0aaf89e44d6b4 540 PANTHER PTHR12428:SF14 168 538 3.1E-142 T 21-04-2016 VFU_RS01650 82562df9371c8aae42f0aaf89e44d6b4 540 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 349 1.3E-113 T 21-04-2016 IPR028053 Membrane insertase YidC, N-terminal VFU_RS01650 82562df9371c8aae42f0aaf89e44d6b4 540 PRINTS PR01900 YidC translocation/secretion protein signature 465 480 5.8E-27 T 21-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VFU_RS01650 82562df9371c8aae42f0aaf89e44d6b4 540 PRINTS PR01900 YidC translocation/secretion protein signature 485 509 5.8E-27 T 21-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VFU_RS01650 82562df9371c8aae42f0aaf89e44d6b4 540 PRINTS PR01900 YidC translocation/secretion protein signature 336 352 5.8E-27 T 21-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VFU_RS01650 82562df9371c8aae42f0aaf89e44d6b4 540 PANTHER PTHR12428 168 538 3.1E-142 T 21-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VFU_RS01650 82562df9371c8aae42f0aaf89e44d6b4 540 Pfam PF02096 60Kd inner membrane protein 351 530 4.7E-63 T 21-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VFU_RS01650 82562df9371c8aae42f0aaf89e44d6b4 540 PRINTS PR00701 60kDa inner membrane protein signature 249 264 3.5E-100 T 21-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VFU_RS01650 82562df9371c8aae42f0aaf89e44d6b4 540 PRINTS PR00701 60kDa inner membrane protein signature 459 481 3.5E-100 T 21-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VFU_RS01650 82562df9371c8aae42f0aaf89e44d6b4 540 PRINTS PR00701 60kDa inner membrane protein signature 2 23 3.5E-100 T 21-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VFU_RS01650 82562df9371c8aae42f0aaf89e44d6b4 540 PRINTS PR00701 60kDa inner membrane protein signature 321 341 3.5E-100 T 21-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VFU_RS01650 82562df9371c8aae42f0aaf89e44d6b4 540 PRINTS PR00701 60kDa inner membrane protein signature 412 435 3.5E-100 T 21-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VFU_RS01650 82562df9371c8aae42f0aaf89e44d6b4 540 PRINTS PR00701 60kDa inner membrane protein signature 71 92 3.5E-100 T 21-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VFU_RS01650 82562df9371c8aae42f0aaf89e44d6b4 540 PRINTS PR00701 60kDa inner membrane protein signature 496 519 3.5E-100 T 21-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VFU_RS01650 82562df9371c8aae42f0aaf89e44d6b4 540 PRINTS PR00701 60kDa inner membrane protein signature 161 181 3.5E-100 T 21-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VFU_RS01650 82562df9371c8aae42f0aaf89e44d6b4 540 PRINTS PR00701 60kDa inner membrane protein signature 214 232 3.5E-100 T 21-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VFU_RS01650 82562df9371c8aae42f0aaf89e44d6b4 540 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 532 25.774 T 21-04-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 VFU_RS02745 d915267235b137bc1f95b4e8461eb0e6 567 PANTHER PTHR11819 4 307 1.1E-237 T 21-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 VFU_RS02745 d915267235b137bc1f95b4e8461eb0e6 567 PANTHER PTHR11819 340 567 1.1E-237 T 21-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 VFU_RS02745 d915267235b137bc1f95b4e8461eb0e6 567 PANTHER PTHR11819:SF159 4 307 1.1E-237 T 21-04-2016 VFU_RS02745 d915267235b137bc1f95b4e8461eb0e6 567 PANTHER PTHR11819:SF159 340 567 1.1E-237 T 21-04-2016 VFU_RS02745 d915267235b137bc1f95b4e8461eb0e6 567 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 8 558 7.6E-262 T 21-04-2016 IPR019899 Sodium/solute symporter, VC2705 subfamily VFU_RS02745 d915267235b137bc1f95b4e8461eb0e6 567 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 471 491 - T 21-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 VFU_RS02745 d915267235b137bc1f95b4e8461eb0e6 567 Pfam PF00474 Sodium:solute symporter family 33 297 1.1E-33 T 21-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 VFU_RS02745 d915267235b137bc1f95b4e8461eb0e6 567 Pfam PF00474 Sodium:solute symporter family 368 489 3.1E-19 T 21-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 VFU_RS04715 d88c7e6517d5093db29753fa232ab537 437 Pfam PF05525 Branched-chain amino acid transport protein 8 425 1.1E-147 T 21-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 VFU_RS04715 d88c7e6517d5093db29753fa232ab537 437 PANTHER PTHR30588:SF0 2 437 1.1E-192 T 21-04-2016 VFU_RS04715 d88c7e6517d5093db29753fa232ab537 437 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 413 4.0E-131 T 21-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 VFU_RS04715 d88c7e6517d5093db29753fa232ab537 437 PANTHER PTHR30588 2 437 1.1E-192 T 21-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 VFU_RS02905 8dc6a7c31ba2827c956795506c6520e3 733 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 732 25.194 T 21-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 VFU_RS02905 8dc6a7c31ba2827c956795506c6520e3 733 PANTHER PTHR30580 1 733 1.0E-276 T 21-04-2016 VFU_RS02905 8dc6a7c31ba2827c956795506c6520e3 733 Gene3D G3DSA:3.40.50.300 457 632 5.1E-34 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS02905 8dc6a7c31ba2827c956795506c6520e3 733 SUPERFAMILY SSF52540 461 612 8.31E-27 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS02905 8dc6a7c31ba2827c956795506c6520e3 733 TIGRFAM TIGR00595 priA: primosomal protein N' 221 729 1.1E-191 T 21-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 VFU_RS02905 8dc6a7c31ba2827c956795506c6520e3 733 SMART SM00487 194 390 5.8E-17 T 21-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VFU_RS02905 8dc6a7c31ba2827c956795506c6520e3 733 Pfam PF00270 DEAD/DEAH box helicase 204 363 2.4E-14 T 21-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VFU_RS02905 8dc6a7c31ba2827c956795506c6520e3 733 Pfam PF00271 Helicase conserved C-terminal domain 500 588 5.2E-7 T 21-04-2016 IPR001650 Helicase, C-terminal VFU_RS02905 8dc6a7c31ba2827c956795506c6520e3 733 SMART SM00490 492 589 7.9E-12 T 21-04-2016 IPR001650 Helicase, C-terminal VFU_RS02905 8dc6a7c31ba2827c956795506c6520e3 733 SUPERFAMILY SSF52540 197 379 1.35E-39 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS02905 8dc6a7c31ba2827c956795506c6520e3 733 Gene3D G3DSA:3.40.50.300 198 381 5.5E-38 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS06040 da5e6e482d6ed59a7fc8525c91af6008 403 SMART SM00825 Beta-ketoacyl synthase 4 403 2.5E-14 T 21-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VFU_RS06040 da5e6e482d6ed59a7fc8525c91af6008 403 Gene3D G3DSA:3.40.47.10 6 257 1.2E-63 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VFU_RS06040 da5e6e482d6ed59a7fc8525c91af6008 403 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 3.4E-45 T 21-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal VFU_RS06040 da5e6e482d6ed59a7fc8525c91af6008 403 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 21-04-2016 IPR018201 Beta-ketoacyl synthase, active site VFU_RS06040 da5e6e482d6ed59a7fc8525c91af6008 403 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 358 2.3E-28 T 21-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal VFU_RS06040 da5e6e482d6ed59a7fc8525c91af6008 403 PANTHER PTHR11712 1 401 1.3E-177 T 21-04-2016 VFU_RS06040 da5e6e482d6ed59a7fc8525c91af6008 403 Gene3D G3DSA:3.40.47.10 261 402 8.9E-51 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VFU_RS06040 da5e6e482d6ed59a7fc8525c91af6008 403 SUPERFAMILY SSF53901 1 251 1.3E-67 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VFU_RS06040 da5e6e482d6ed59a7fc8525c91af6008 403 SUPERFAMILY SSF53901 213 401 3.84E-62 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VFU_RS02715 21e98a15d6d5dd15e4a0cd95c7caf47a 692 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 28 663 1.2E-234 T 21-04-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 VFU_RS02715 21e98a15d6d5dd15e4a0cd95c7caf47a 692 SMART SM00487 264 458 3.6E-31 T 21-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VFU_RS02715 21e98a15d6d5dd15e4a0cd95c7caf47a 692 PANTHER PTHR24031 258 281 3.8E-131 T 21-04-2016 VFU_RS02715 21e98a15d6d5dd15e4a0cd95c7caf47a 692 PANTHER PTHR24031 625 666 3.8E-131 T 21-04-2016 VFU_RS02715 21e98a15d6d5dd15e4a0cd95c7caf47a 692 PANTHER PTHR24031 298 602 3.8E-131 T 21-04-2016 VFU_RS02715 21e98a15d6d5dd15e4a0cd95c7caf47a 692 SUPERFAMILY SSF52540 216 452 6.29E-57 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS02715 21e98a15d6d5dd15e4a0cd95c7caf47a 692 Pfam PF00270 DEAD/DEAH box helicase 271 432 1.8E-18 T 21-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VFU_RS02715 21e98a15d6d5dd15e4a0cd95c7caf47a 692 PANTHER PTHR24031:SF249 258 281 3.8E-131 T 21-04-2016 VFU_RS02715 21e98a15d6d5dd15e4a0cd95c7caf47a 692 PANTHER PTHR24031:SF249 625 666 3.8E-131 T 21-04-2016 VFU_RS02715 21e98a15d6d5dd15e4a0cd95c7caf47a 692 PANTHER PTHR24031:SF249 298 602 3.8E-131 T 21-04-2016 VFU_RS02715 21e98a15d6d5dd15e4a0cd95c7caf47a 692 Pfam PF17191 RecG wedge domain 13 170 9.6E-20 T 21-04-2016 IPR033454 RecG, wedge domain VFU_RS02715 21e98a15d6d5dd15e4a0cd95c7caf47a 692 SUPERFAMILY SSF52540 507 652 8.43E-45 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS02715 21e98a15d6d5dd15e4a0cd95c7caf47a 692 Gene3D G3DSA:3.40.50.300 254 452 1.4E-56 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS02715 21e98a15d6d5dd15e4a0cd95c7caf47a 692 SUPERFAMILY SSF52540 291 341 8.43E-45 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS02715 21e98a15d6d5dd15e4a0cd95c7caf47a 692 Gene3D G3DSA:1.10.150.20 2 36 4.6E-6 T 21-04-2016 VFU_RS02715 21e98a15d6d5dd15e4a0cd95c7caf47a 692 Gene3D G3DSA:2.40.50.140 46 140 4.4E-32 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS02715 21e98a15d6d5dd15e4a0cd95c7caf47a 692 SMART SM00490 504 588 5.3E-22 T 21-04-2016 IPR001650 Helicase, C-terminal VFU_RS02715 21e98a15d6d5dd15e4a0cd95c7caf47a 692 SUPERFAMILY SSF50249 8 173 6.17E-40 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS02715 21e98a15d6d5dd15e4a0cd95c7caf47a 692 Pfam PF00271 Helicase conserved C-terminal domain 480 587 1.7E-18 T 21-04-2016 IPR001650 Helicase, C-terminal VFU_RS02715 21e98a15d6d5dd15e4a0cd95c7caf47a 692 Gene3D G3DSA:3.40.50.300 453 637 2.3E-42 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS11170 58c57d5c9626a0eaf522e17b839b208b 192 Gene3D G3DSA:2.160.10.10 5 188 1.8E-61 T 21-04-2016 VFU_RS11170 58c57d5c9626a0eaf522e17b839b208b 192 SMART SM01266 4 58 7.0E-12 T 21-04-2016 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 VFU_RS11170 58c57d5c9626a0eaf522e17b839b208b 192 Pfam PF12464 Maltose acetyltransferase 7 57 8.3E-11 T 21-04-2016 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 VFU_RS11170 58c57d5c9626a0eaf522e17b839b208b 192 PANTHER PTHR23416:SF60 7 191 8.9E-68 T 21-04-2016 VFU_RS11170 58c57d5c9626a0eaf522e17b839b208b 192 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 93 106 0.12 T 21-04-2016 IPR001451 Hexapeptide repeat VFU_RS11170 58c57d5c9626a0eaf522e17b839b208b 192 PANTHER PTHR23416 7 191 8.9E-68 T 21-04-2016 VFU_RS11170 58c57d5c9626a0eaf522e17b839b208b 192 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 130 164 6.5E-11 T 21-04-2016 IPR001451 Hexapeptide repeat VFU_RS11170 58c57d5c9626a0eaf522e17b839b208b 192 SUPERFAMILY SSF51161 4 183 4.71E-55 T 21-04-2016 IPR011004 Trimeric LpxA-like VFU_RS14395 9821ba392bceae082e0ae0862ef7064a 172 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 34.505 T 21-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VFU_RS14395 9821ba392bceae082e0ae0862ef7064a 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 1.6E-50 T 21-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VFU_RS14395 9821ba392bceae082e0ae0862ef7064a 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 1.6E-50 T 21-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VFU_RS14395 9821ba392bceae082e0ae0862ef7064a 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 1.6E-50 T 21-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VFU_RS14395 9821ba392bceae082e0ae0862ef7064a 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 1.6E-50 T 21-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VFU_RS14395 9821ba392bceae082e0ae0862ef7064a 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 1.6E-50 T 21-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VFU_RS14395 9821ba392bceae082e0ae0862ef7064a 172 PIRSF PIRSF006160 1 162 5.0E-65 T 21-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VFU_RS14395 9821ba392bceae082e0ae0862ef7064a 172 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 154 3.3E-60 T 21-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VFU_RS14395 9821ba392bceae082e0ae0862ef7064a 172 PANTHER PTHR35799 2 169 1.8E-99 T 21-04-2016 VFU_RS14395 9821ba392bceae082e0ae0862ef7064a 172 Gene3D G3DSA:3.30.1360.80 1 171 5.4E-74 T 21-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VFU_RS14395 9821ba392bceae082e0ae0862ef7064a 172 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 154 7.0E-77 T 21-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VFU_RS14395 9821ba392bceae082e0ae0862ef7064a 172 SUPERFAMILY SSF63411 4 162 2.01E-64 T 21-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VFU_RS03130 e8e07b3cd8a61f185db0cce5a378578e 172 Gene3D G3DSA:3.40.50.300 2 171 8.4E-59 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS03130 e8e07b3cd8a61f185db0cce5a378578e 172 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 29.587 T 21-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 VFU_RS03130 e8e07b3cd8a61f185db0cce5a378578e 172 PANTHER PTHR21087 1 172 6.7E-74 T 21-04-2016 VFU_RS03130 e8e07b3cd8a61f185db0cce5a378578e 172 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 21-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 VFU_RS03130 e8e07b3cd8a61f185db0cce5a378578e 172 PRINTS PR01100 Shikimate kinase family signature 7 22 4.0E-29 T 21-04-2016 VFU_RS03130 e8e07b3cd8a61f185db0cce5a378578e 172 PRINTS PR01100 Shikimate kinase family signature 98 115 4.0E-29 T 21-04-2016 VFU_RS03130 e8e07b3cd8a61f185db0cce5a378578e 172 PRINTS PR01100 Shikimate kinase family signature 31 44 4.0E-29 T 21-04-2016 VFU_RS03130 e8e07b3cd8a61f185db0cce5a378578e 172 PRINTS PR01100 Shikimate kinase family signature 77 86 4.0E-29 T 21-04-2016 VFU_RS03130 e8e07b3cd8a61f185db0cce5a378578e 172 PRINTS PR01100 Shikimate kinase family signature 59 67 4.0E-29 T 21-04-2016 VFU_RS03130 e8e07b3cd8a61f185db0cce5a378578e 172 SUPERFAMILY SSF52540 4 169 2.13E-32 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS03130 e8e07b3cd8a61f185db0cce5a378578e 172 Pfam PF01202 Shikimate kinase 13 169 9.4E-58 T 21-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 VFU_RS13970 fdf1ad235fc8a1bfe35fc7d83095de94 241 PANTHER PTHR21234:SF8 3 235 8.3E-85 T 21-04-2016 VFU_RS13970 fdf1ad235fc8a1bfe35fc7d83095de94 241 Gene3D G3DSA:3.40.50.1580 10 233 2.0E-84 T 21-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VFU_RS13970 fdf1ad235fc8a1bfe35fc7d83095de94 241 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.595 T 21-04-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VFU_RS13970 fdf1ad235fc8a1bfe35fc7d83095de94 241 SUPERFAMILY SSF53167 3 235 9.03E-94 T 21-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VFU_RS13970 fdf1ad235fc8a1bfe35fc7d83095de94 241 Pfam PF01048 Phosphorylase superfamily 15 222 2.8E-41 T 21-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VFU_RS13970 fdf1ad235fc8a1bfe35fc7d83095de94 241 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 1.2E-119 T 21-04-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VFU_RS13970 fdf1ad235fc8a1bfe35fc7d83095de94 241 PANTHER PTHR21234 3 235 8.3E-85 T 21-04-2016 IPR018017 Nucleoside phosphorylase VFU_RS13970 fdf1ad235fc8a1bfe35fc7d83095de94 241 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 21-04-2016 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VFU_RS10290 00483e4d07ffcdc7caebe3acb1258571 267 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 15 247 7.2E-33 T 21-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 VFU_RS10290 00483e4d07ffcdc7caebe3acb1258571 267 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 267 47.059 T 21-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 VFU_RS10290 00483e4d07ffcdc7caebe3acb1258571 267 PANTHER PTHR34148 2 261 3.1E-53 T 21-04-2016 VFU_RS10290 00483e4d07ffcdc7caebe3acb1258571 267 Pfam PF02654 Cobalamin-5-phosphate synthase 15 248 2.0E-50 T 21-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 VFU_RS10290 00483e4d07ffcdc7caebe3acb1258571 267 PANTHER PTHR34148:SF1 2 261 3.1E-53 T 21-04-2016 VFU_RS02425 8cac2c77a4212c52338a2bc2a802e220 466 PIRSF PIRSF000350 1 463 9.9E-70 T 21-04-2016 VFU_RS02425 8cac2c77a4212c52338a2bc2a802e220 466 Gene3D G3DSA:3.50.50.60 149 335 3.6E-49 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS02425 8cac2c77a4212c52338a2bc2a802e220 466 Gene3D G3DSA:3.30.390.30 345 460 4.0E-33 T 21-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VFU_RS02425 8cac2c77a4212c52338a2bc2a802e220 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 2.9E-28 T 21-04-2016 VFU_RS02425 8cac2c77a4212c52338a2bc2a802e220 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 2.9E-28 T 21-04-2016 VFU_RS02425 8cac2c77a4212c52338a2bc2a802e220 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.9E-28 T 21-04-2016 VFU_RS02425 8cac2c77a4212c52338a2bc2a802e220 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 2.9E-28 T 21-04-2016 VFU_RS02425 8cac2c77a4212c52338a2bc2a802e220 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 2.9E-28 T 21-04-2016 VFU_RS02425 8cac2c77a4212c52338a2bc2a802e220 466 SUPERFAMILY SSF51905 2 322 1.12E-56 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS02425 8cac2c77a4212c52338a2bc2a802e220 466 PANTHER PTHR22912 1 461 1.0E-281 T 21-04-2016 VFU_RS02425 8cac2c77a4212c52338a2bc2a802e220 466 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 2 466 64.584 T 21-04-2016 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 VFU_RS02425 8cac2c77a4212c52338a2bc2a802e220 466 SUPERFAMILY SSF55424 345 463 2.23E-30 T 21-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 VFU_RS02425 8cac2c77a4212c52338a2bc2a802e220 466 PANTHER PTHR22912:SF93 1 461 1.0E-281 T 21-04-2016 VFU_RS02425 8cac2c77a4212c52338a2bc2a802e220 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 326 5.5E-60 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS02425 8cac2c77a4212c52338a2bc2a802e220 466 Gene3D G3DSA:3.50.50.60 6 148 5.3E-32 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS02425 8cac2c77a4212c52338a2bc2a802e220 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 7.5E-52 T 21-04-2016 VFU_RS02425 8cac2c77a4212c52338a2bc2a802e220 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 7.5E-52 T 21-04-2016 VFU_RS02425 8cac2c77a4212c52338a2bc2a802e220 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 7.5E-52 T 21-04-2016 VFU_RS02425 8cac2c77a4212c52338a2bc2a802e220 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 7.5E-52 T 21-04-2016 VFU_RS02425 8cac2c77a4212c52338a2bc2a802e220 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 7.5E-52 T 21-04-2016 VFU_RS02425 8cac2c77a4212c52338a2bc2a802e220 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 7.5E-52 T 21-04-2016 VFU_RS02425 8cac2c77a4212c52338a2bc2a802e220 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 7.5E-52 T 21-04-2016 VFU_RS02425 8cac2c77a4212c52338a2bc2a802e220 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 7.5E-52 T 21-04-2016 VFU_RS02425 8cac2c77a4212c52338a2bc2a802e220 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 7.5E-52 T 21-04-2016 VFU_RS02425 8cac2c77a4212c52338a2bc2a802e220 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 457 8.5E-30 T 21-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VFU_RS14585 733573a6cba0c20889b1a554dfc87e13 628 SUPERFAMILY SSF88659 524 626 1.13E-25 T 21-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS14585 733573a6cba0c20889b1a554dfc87e13 628 Pfam PF03979 Sigma-70 factor, region 1.1 4 80 2.9E-28 T 21-04-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 VFU_RS14585 733573a6cba0c20889b1a554dfc87e13 628 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 418 431 - T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS14585 733573a6cba0c20889b1a554dfc87e13 628 Gene3D G3DSA:1.10.10.10 467 518 1.3E-26 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS14585 733573a6cba0c20889b1a554dfc87e13 628 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 390 615 1.2E-37 T 21-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS14585 733573a6cba0c20889b1a554dfc87e13 628 Pfam PF04545 Sigma-70, region 4 562 615 1.6E-19 T 21-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS14585 733573a6cba0c20889b1a554dfc87e13 628 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 627 46.299 T 21-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 VFU_RS14585 733573a6cba0c20889b1a554dfc87e13 628 SUPERFAMILY SSF88946 115 461 1.91E-98 T 21-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS14585 733573a6cba0c20889b1a554dfc87e13 628 Pfam PF04542 Sigma-70 region 2 394 463 1.8E-21 T 21-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS14585 733573a6cba0c20889b1a554dfc87e13 628 PANTHER PTHR30603:SF0 341 627 7.1E-251 T 21-04-2016 VFU_RS14585 733573a6cba0c20889b1a554dfc87e13 628 PANTHER PTHR30603:SF0 1 152 7.1E-251 T 21-04-2016 VFU_RS14585 733573a6cba0c20889b1a554dfc87e13 628 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 1.5E-12 T 21-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS14585 733573a6cba0c20889b1a554dfc87e13 628 Gene3D G3DSA:1.10.10.10 559 627 5.8E-33 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS14585 733573a6cba0c20889b1a554dfc87e13 628 Gene3D G3DSA:1.10.601.10 112 463 6.5E-132 T 21-04-2016 VFU_RS14585 733573a6cba0c20889b1a554dfc87e13 628 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 390 626 1.9E-120 T 21-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 VFU_RS14585 733573a6cba0c20889b1a554dfc87e13 628 Pfam PF04539 Sigma-70 region 3 473 548 1.3E-28 T 21-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS14585 733573a6cba0c20889b1a554dfc87e13 628 Pfam PF04546 Sigma-70, non-essential region 139 363 6.3E-67 T 21-04-2016 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS14585 733573a6cba0c20889b1a554dfc87e13 628 PANTHER PTHR30603 341 627 7.1E-251 T 21-04-2016 VFU_RS14585 733573a6cba0c20889b1a554dfc87e13 628 PANTHER PTHR30603 1 152 7.1E-251 T 21-04-2016 VFU_RS14585 733573a6cba0c20889b1a554dfc87e13 628 PRINTS PR00046 Major sigma-70 factor signature 602 613 3.4E-31 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS14585 733573a6cba0c20889b1a554dfc87e13 628 PRINTS PR00046 Major sigma-70 factor signature 418 431 3.4E-31 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS14585 733573a6cba0c20889b1a554dfc87e13 628 PRINTS PR00046 Major sigma-70 factor signature 566 578 3.4E-31 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS14585 733573a6cba0c20889b1a554dfc87e13 628 PRINTS PR00046 Major sigma-70 factor signature 442 450 3.4E-31 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS14585 733573a6cba0c20889b1a554dfc87e13 628 PRINTS PR00046 Major sigma-70 factor signature 587 602 3.4E-31 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS14585 733573a6cba0c20889b1a554dfc87e13 628 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 587 613 - T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS14585 733573a6cba0c20889b1a554dfc87e13 628 SUPERFAMILY SSF88659 467 540 2.28E-20 T 21-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS14225 00c69702b6262af4f89d71ee6f042b6f 486 Gene3D G3DSA:3.40.50.720 25 110 7.8E-38 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS14225 00c69702b6262af4f89d71ee6f042b6f 486 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 22 479 43.482 T 21-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VFU_RS14225 00c69702b6262af4f89d71ee6f042b6f 486 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 25 473 7.7E-189 T 21-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VFU_RS14225 00c69702b6262af4f89d71ee6f042b6f 486 SUPERFAMILY SSF51984 23 109 1.31E-28 T 21-04-2016 VFU_RS14225 00c69702b6262af4f89d71ee6f042b6f 486 SUPERFAMILY SSF53623 108 323 2.62E-72 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VFU_RS14225 00c69702b6262af4f89d71ee6f042b6f 486 Gene3D G3DSA:3.90.190.20 329 475 1.3E-57 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VFU_RS14225 00c69702b6262af4f89d71ee6f042b6f 486 Pfam PF08245 Mur ligase middle domain 127 307 2.3E-28 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VFU_RS14225 00c69702b6262af4f89d71ee6f042b6f 486 SUPERFAMILY SSF53244 326 474 8.24E-49 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VFU_RS14225 00c69702b6262af4f89d71ee6f042b6f 486 Gene3D G3DSA:3.40.1190.10 111 328 7.9E-83 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VFU_RS14225 00c69702b6262af4f89d71ee6f042b6f 486 Pfam PF01225 Mur ligase family, catalytic domain 25 121 5.3E-29 T 21-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 VFU_RS14225 00c69702b6262af4f89d71ee6f042b6f 486 PANTHER PTHR23135:SF5 17 467 3.9E-228 T 21-04-2016 VFU_RS14225 00c69702b6262af4f89d71ee6f042b6f 486 Pfam PF02875 Mur ligase family, glutamate ligase domain 329 417 8.0E-22 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VFU_RS14225 00c69702b6262af4f89d71ee6f042b6f 486 PANTHER PTHR23135 17 467 3.9E-228 T 21-04-2016 VFU_RS08435 538c5071b8b5ad3c9ed1575aaa71edf9 1297 PANTHER PTHR24027:SF248 116 891 4.4E-34 T 21-04-2016 VFU_RS08435 538c5071b8b5ad3c9ed1575aaa71edf9 1297 PANTHER PTHR24027:SF248 1291 1297 4.4E-34 T 21-04-2016 VFU_RS08435 538c5071b8b5ad3c9ed1575aaa71edf9 1297 SMART SM00112 185 276 0.028 T 21-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 VFU_RS08435 538c5071b8b5ad3c9ed1575aaa71edf9 1297 SMART SM00112 677 768 5.3E-5 T 21-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 VFU_RS08435 538c5071b8b5ad3c9ed1575aaa71edf9 1297 SMART SM00112 431 522 0.017 T 21-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 VFU_RS08435 538c5071b8b5ad3c9ed1575aaa71edf9 1297 SMART SM00112 308 399 0.0084 T 21-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 VFU_RS08435 538c5071b8b5ad3c9ed1575aaa71edf9 1297 SMART SM00112 791 880 2.0E-5 T 21-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 VFU_RS08435 538c5071b8b5ad3c9ed1575aaa71edf9 1297 SMART SM00112 554 645 0.0043 T 21-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 VFU_RS08435 538c5071b8b5ad3c9ed1575aaa71edf9 1297 SUPERFAMILY SSF49313 644 746 5.42E-8 T 21-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 VFU_RS08435 538c5071b8b5ad3c9ed1575aaa71edf9 1297 Gene3D G3DSA:2.60.40.60 768 882 1.3E-12 T 21-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 VFU_RS08435 538c5071b8b5ad3c9ed1575aaa71edf9 1297 Gene3D G3DSA:2.60.40.60 656 767 4.1E-11 T 21-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 VFU_RS08435 538c5071b8b5ad3c9ed1575aaa71edf9 1297 SUPERFAMILY SSF49313 535 624 6.57E-8 T 21-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 VFU_RS08435 538c5071b8b5ad3c9ed1575aaa71edf9 1297 SUPERFAMILY SSF49313 398 503 2.14E-7 T 21-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 VFU_RS08435 538c5071b8b5ad3c9ed1575aaa71edf9 1297 Gene3D G3DSA:2.60.40.60 150 267 3.5E-10 T 21-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 VFU_RS08435 538c5071b8b5ad3c9ed1575aaa71edf9 1297 Gene3D G3DSA:2.60.40.60 535 635 1.8E-10 T 21-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 VFU_RS08435 538c5071b8b5ad3c9ed1575aaa71edf9 1297 Gene3D G3DSA:2.60.40.60 412 512 5.6E-10 T 21-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 VFU_RS08435 538c5071b8b5ad3c9ed1575aaa71edf9 1297 Gene3D G3DSA:2.60.40.60 289 389 1.6E-10 T 21-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 VFU_RS08435 538c5071b8b5ad3c9ed1575aaa71edf9 1297 SUPERFAMILY SSF49313 764 867 1.57E-11 T 21-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 VFU_RS08435 538c5071b8b5ad3c9ed1575aaa71edf9 1297 PANTHER PTHR24027 116 891 4.4E-34 T 21-04-2016 VFU_RS08435 538c5071b8b5ad3c9ed1575aaa71edf9 1297 PANTHER PTHR24027 1291 1297 4.4E-34 T 21-04-2016 VFU_RS08435 538c5071b8b5ad3c9ed1575aaa71edf9 1297 SUPERFAMILY SSF49313 150 265 1.3E-8 T 21-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 VFU_RS08435 538c5071b8b5ad3c9ed1575aaa71edf9 1297 SUPERFAMILY SSF49313 275 377 7.99E-8 T 21-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 VFU_RS08435 538c5071b8b5ad3c9ed1575aaa71edf9 1297 Pfam PF08548 Peptidase M10 serralysin C terminal 1185 1242 1.1E-7 T 21-04-2016 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 VFU_RS08325 bcdf8e4d99545e3e6027d3933b9b32f5 347 SUPERFAMILY SSF56935 24 347 1.5E-39 T 21-04-2016 VFU_RS08325 bcdf8e4d99545e3e6027d3933b9b32f5 347 PANTHER PTHR34501 4 347 4.6E-21 T 21-04-2016 VFU_RS08325 bcdf8e4d99545e3e6027d3933b9b32f5 347 Pfam PF13609 Gram-negative porin 16 325 5.0E-25 T 21-04-2016 VFU_RS08325 bcdf8e4d99545e3e6027d3933b9b32f5 347 PANTHER PTHR34501:SF2 4 347 4.6E-21 T 21-04-2016 VFU_RS08325 bcdf8e4d99545e3e6027d3933b9b32f5 347 Gene3D G3DSA:2.40.160.10 24 347 2.1E-39 T 21-04-2016 IPR023614 Porin domain VFU_RS08460 4a95112b68afdf9aa624bdc4c3e8d5d6 170 PIRSF PIRSF028103 1 170 9.0E-42 T 21-04-2016 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 VFU_RS08460 4a95112b68afdf9aa624bdc4c3e8d5d6 170 PANTHER PTHR34875 5 166 2.8E-27 T 21-04-2016 VFU_RS08460 4a95112b68afdf9aa624bdc4c3e8d5d6 170 SUPERFAMILY SSF55021 88 167 2.33E-11 T 21-04-2016 VFU_RS08460 4a95112b68afdf9aa624bdc4c3e8d5d6 170 Gene3D G3DSA:3.30.70.260 4 74 7.8E-4 T 21-04-2016 VFU_RS08460 4a95112b68afdf9aa624bdc4c3e8d5d6 170 Gene3D G3DSA:3.30.70.260 85 166 2.0E-15 T 21-04-2016 VFU_RS08460 4a95112b68afdf9aa624bdc4c3e8d5d6 170 Pfam PF13740 ACT domain 4 58 4.6E-8 T 21-04-2016 VFU_RS09150 43dd83e883e7f9f8012ae16b110096b8 489 Pfam PF02954 Bacterial regulatory protein, Fis family 439 480 8.5E-8 T 21-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VFU_RS09150 43dd83e883e7f9f8012ae16b110096b8 489 SMART SM00382 175 318 1.2E-11 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS09150 43dd83e883e7f9f8012ae16b110096b8 489 SMART SM00448 16 127 2.1E-29 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS09150 43dd83e883e7f9f8012ae16b110096b8 489 PANTHER PTHR32071:SF18 1 480 4.3E-215 T 21-04-2016 VFU_RS09150 43dd83e883e7f9f8012ae16b110096b8 489 SUPERFAMILY SSF52172 16 199 4.84E-39 T 21-04-2016 IPR011006 CheY-like superfamily VFU_RS09150 43dd83e883e7f9f8012ae16b110096b8 489 Gene3D G3DSA:1.10.8.60 327 386 4.4E-16 T 21-04-2016 VFU_RS09150 43dd83e883e7f9f8012ae16b110096b8 489 Gene3D G3DSA:3.40.50.300 153 326 2.1E-56 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS09150 43dd83e883e7f9f8012ae16b110096b8 489 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 367 376 - T 21-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VFU_RS09150 43dd83e883e7f9f8012ae16b110096b8 489 Pfam PF00158 Sigma-54 interaction domain 155 320 8.5E-69 T 21-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VFU_RS09150 43dd83e883e7f9f8012ae16b110096b8 489 Gene3D G3DSA:1.10.10.60 431 480 6.6E-17 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS09150 43dd83e883e7f9f8012ae16b110096b8 489 SUPERFAMILY SSF52540 154 384 2.7E-67 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS09150 43dd83e883e7f9f8012ae16b110096b8 489 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 240 255 - T 21-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VFU_RS09150 43dd83e883e7f9f8012ae16b110096b8 489 Gene3D G3DSA:3.40.50.2300 17 139 2.4E-30 T 21-04-2016 VFU_RS09150 43dd83e883e7f9f8012ae16b110096b8 489 Pfam PF00072 Response regulator receiver domain 18 128 1.3E-24 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS09150 43dd83e883e7f9f8012ae16b110096b8 489 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 179 192 - T 21-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VFU_RS09150 43dd83e883e7f9f8012ae16b110096b8 489 SUPERFAMILY SSF46689 367 480 1.57E-10 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS09150 43dd83e883e7f9f8012ae16b110096b8 489 PANTHER PTHR32071 1 480 4.3E-215 T 21-04-2016 VFU_RS01050 c2c262b5d92dcfe353932143f8b44736 748 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 631 650 1.8E-28 T 21-04-2016 VFU_RS01050 c2c262b5d92dcfe353932143f8b44736 748 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 556 567 1.8E-28 T 21-04-2016 VFU_RS01050 c2c262b5d92dcfe353932143f8b44736 748 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 280 294 1.8E-28 T 21-04-2016 VFU_RS01050 c2c262b5d92dcfe353932143f8b44736 748 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 432 446 1.8E-28 T 21-04-2016 VFU_RS01050 c2c262b5d92dcfe353932143f8b44736 748 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 578 588 1.8E-28 T 21-04-2016 VFU_RS01050 c2c262b5d92dcfe353932143f8b44736 748 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 654 666 1.8E-28 T 21-04-2016 VFU_RS01050 c2c262b5d92dcfe353932143f8b44736 748 PANTHER PTHR24093:SF319 8 741 6.5E-290 T 21-04-2016 VFU_RS01050 c2c262b5d92dcfe353932143f8b44736 748 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 434 440 - T 21-04-2016 IPR018303 P-type ATPase, phosphorylation site VFU_RS01050 c2c262b5d92dcfe353932143f8b44736 748 SUPERFAMILY SSF81653 234 330 3.53E-30 T 21-04-2016 VFU_RS01050 c2c262b5d92dcfe353932143f8b44736 748 Gene3D G3DSA:3.30.70.100 7 69 1.4E-18 T 21-04-2016 VFU_RS01050 c2c262b5d92dcfe353932143f8b44736 748 Gene3D G3DSA:3.40.50.1000 559 699 9.6E-55 T 21-04-2016 IPR023214 HAD-like domain VFU_RS01050 c2c262b5d92dcfe353932143f8b44736 748 Gene3D G3DSA:3.40.50.1000 403 446 9.6E-55 T 21-04-2016 IPR023214 HAD-like domain VFU_RS01050 c2c262b5d92dcfe353932143f8b44736 748 Pfam PF00403 Heavy-metal-associated domain 11 66 7.2E-12 T 21-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VFU_RS01050 c2c262b5d92dcfe353932143f8b44736 748 SUPERFAMILY SSF56784 489 737 2.53E-57 T 21-04-2016 IPR023214 HAD-like domain VFU_RS01050 c2c262b5d92dcfe353932143f8b44736 748 SUPERFAMILY SSF56784 432 450 2.53E-57 T 21-04-2016 IPR023214 HAD-like domain VFU_RS01050 c2c262b5d92dcfe353932143f8b44736 748 PANTHER PTHR24093 8 741 6.5E-290 T 21-04-2016 VFU_RS01050 c2c262b5d92dcfe353932143f8b44736 748 Pfam PF00702 haloacid dehalogenase-like hydrolase 428 645 4.4E-41 T 21-04-2016 VFU_RS01050 c2c262b5d92dcfe353932143f8b44736 748 Gene3D G3DSA:2.70.150.10 162 330 2.3E-34 T 21-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 VFU_RS01050 c2c262b5d92dcfe353932143f8b44736 748 SUPERFAMILY SSF55008 4 74 1.7E-17 T 21-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VFU_RS01050 c2c262b5d92dcfe353932143f8b44736 748 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 145 741 3.9E-184 T 21-04-2016 VFU_RS01050 c2c262b5d92dcfe353932143f8b44736 748 Gene3D G3DSA:3.40.1110.10 447 558 7.6E-25 T 21-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 VFU_RS01050 c2c262b5d92dcfe353932143f8b44736 748 Pfam PF00122 E1-E2 ATPase 201 423 5.3E-65 T 21-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 VFU_RS01050 c2c262b5d92dcfe353932143f8b44736 748 SUPERFAMILY SSF81665 680 710 1.2E-10 T 21-04-2016 VFU_RS01050 c2c262b5d92dcfe353932143f8b44736 748 SUPERFAMILY SSF81665 331 426 1.2E-10 T 21-04-2016 VFU_RS01050 c2c262b5d92dcfe353932143f8b44736 748 SUPERFAMILY SSF81665 201 234 1.2E-10 T 21-04-2016 VFU_RS01050 c2c262b5d92dcfe353932143f8b44736 748 PRINTS PR00943 Copper-transporting ATPase signature 148 167 3.4E-11 T 21-04-2016 VFU_RS01050 c2c262b5d92dcfe353932143f8b44736 748 PRINTS PR00943 Copper-transporting ATPase signature 353 367 3.4E-11 T 21-04-2016 VFU_RS01050 c2c262b5d92dcfe353932143f8b44736 748 PRINTS PR00943 Copper-transporting ATPase signature 220 238 3.4E-11 T 21-04-2016 VFU_RS01050 c2c262b5d92dcfe353932143f8b44736 748 PRINTS PR00943 Copper-transporting ATPase signature 48 68 3.4E-11 T 21-04-2016 VFU_RS01050 c2c262b5d92dcfe353932143f8b44736 748 PRINTS PR00943 Copper-transporting ATPase signature 608 625 3.4E-11 T 21-04-2016 VFU_RS01050 c2c262b5d92dcfe353932143f8b44736 748 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 208 708 5.9E-92 T 21-04-2016 IPR001757 P-type ATPase GO:0016021 VFU_RS01050 c2c262b5d92dcfe353932143f8b44736 748 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 163 740 3.3E-187 T 21-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 VFU_RS08225 3e3ad0dcaef47f07b156f84beabcd8c6 208 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 89 - T 21-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VFU_RS08225 3e3ad0dcaef47f07b156f84beabcd8c6 208 Pfam PF01066 CDP-alcohol phosphatidyltransferase 27 89 3.0E-9 T 21-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VFU_RS09085 8fbd10229827faae0c131ddd9f56f4f9 288 PANTHER PTHR12149:SF8 1 286 1.6E-105 T 21-04-2016 VFU_RS09085 8fbd10229827faae0c131ddd9f56f4f9 288 PIRSF PIRSF006221 1 288 2.9E-104 T 21-04-2016 IPR016477 Fructosamine/Ketosamine-3-kinase VFU_RS09085 8fbd10229827faae0c131ddd9f56f4f9 288 Pfam PF03881 Fructosamine kinase 1 287 6.5E-121 T 21-04-2016 IPR016477 Fructosamine/Ketosamine-3-kinase VFU_RS09085 8fbd10229827faae0c131ddd9f56f4f9 288 Gene3D G3DSA:3.90.1200.10 104 248 3.5E-6 T 21-04-2016 VFU_RS09085 8fbd10229827faae0c131ddd9f56f4f9 288 SUPERFAMILY SSF56112 3 282 1.48E-40 T 21-04-2016 IPR011009 Protein kinase-like domain VFU_RS09085 8fbd10229827faae0c131ddd9f56f4f9 288 PANTHER PTHR12149 1 286 1.6E-105 T 21-04-2016 VFU_RS04540 b2858c981887fcc3cabe8cd5dfa6cf14 133 PANTHER PTHR35813:SF1 1 129 4.4E-23 T 21-04-2016 VFU_RS04540 b2858c981887fcc3cabe8cd5dfa6cf14 133 PIRSF PIRSF016789 5 126 2.4E-30 T 21-04-2016 IPR007401 Protein of unknown function DUF454 VFU_RS04540 b2858c981887fcc3cabe8cd5dfa6cf14 133 Pfam PF04304 Protein of unknown function (DUF454) 9 121 3.7E-31 T 21-04-2016 IPR007401 Protein of unknown function DUF454 VFU_RS04540 b2858c981887fcc3cabe8cd5dfa6cf14 133 PANTHER PTHR35813 1 129 4.4E-23 T 21-04-2016 VFU_RS03220 d0f72f7ff6553b0d045c227c38df376e 157 Pfam PF09523 Protein of unknown function (DUF2390) 15 115 3.2E-27 T 21-04-2016 IPR012659 Conserved hypothetical protein CHP02444 VFU_RS03220 d0f72f7ff6553b0d045c227c38df376e 157 TIGRFAM TIGR02444 TIGR02444: TIGR02444 family protein 13 119 1.4E-35 T 21-04-2016 IPR012659 Conserved hypothetical protein CHP02444 VFU_RS12050 d59a7a68f0cffab9ee70fac79162f1ee 337 SMART SM00870 5 324 1.5E-138 T 21-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 VFU_RS12050 d59a7a68f0cffab9ee70fac79162f1ee 337 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 21-04-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 VFU_RS12050 d59a7a68f0cffab9ee70fac79162f1ee 337 Gene3D G3DSA:3.40.50.40 212 336 3.3E-47 T 21-04-2016 IPR027473 L-asparaginase, C-terminal domain VFU_RS12050 d59a7a68f0cffab9ee70fac79162f1ee 337 SUPERFAMILY SSF53774 3 336 1.06E-112 T 21-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 VFU_RS12050 d59a7a68f0cffab9ee70fac79162f1ee 337 PIRSF PIRSF500176 2 333 4.6E-109 T 21-04-2016 VFU_RS12050 d59a7a68f0cffab9ee70fac79162f1ee 337 PIRSF PIRSF001220 1 335 1.9E-94 T 21-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 VFU_RS12050 d59a7a68f0cffab9ee70fac79162f1ee 337 Gene3D G3DSA:3.40.50.1170 4 195 2.5E-80 T 21-04-2016 IPR027474 L-asparaginase, N-terminal VFU_RS12050 d59a7a68f0cffab9ee70fac79162f1ee 337 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 21-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 VFU_RS12050 d59a7a68f0cffab9ee70fac79162f1ee 337 PANTHER PTHR11707 1 336 2.7E-248 T 21-04-2016 VFU_RS12050 d59a7a68f0cffab9ee70fac79162f1ee 337 Pfam PF00710 Asparaginase, N-terminal 5 191 5.0E-68 T 21-04-2016 IPR027474 L-asparaginase, N-terminal VFU_RS12050 d59a7a68f0cffab9ee70fac79162f1ee 337 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 4 336 2.9E-115 T 21-04-2016 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 VFU_RS12050 d59a7a68f0cffab9ee70fac79162f1ee 337 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 5.4E-16 T 21-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 VFU_RS12050 d59a7a68f0cffab9ee70fac79162f1ee 337 PRINTS PR00139 Asparaginase/glutaminase family signature 261 279 5.4E-16 T 21-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 VFU_RS12050 d59a7a68f0cffab9ee70fac79162f1ee 337 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 5.4E-16 T 21-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 VFU_RS12050 d59a7a68f0cffab9ee70fac79162f1ee 337 PANTHER PTHR11707:SF31 1 336 2.7E-248 T 21-04-2016 VFU_RS13600 f350ee23ef053ab6ecbcee992cba3641 436 PIRSF PIRSF001362 1 436 8.0E-225 T 21-04-2016 VFU_RS13600 f350ee23ef053ab6ecbcee992cba3641 436 SUPERFAMILY SSF51621 6 436 5.83E-154 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VFU_RS13600 f350ee23ef053ab6ecbcee992cba3641 436 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 258 436 6.5E-90 T 21-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 VFU_RS13600 f350ee23ef053ab6ecbcee992cba3641 436 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 10 257 8.8E-114 T 21-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 VFU_RS13600 f350ee23ef053ab6ecbcee992cba3641 436 ProSitePatterns PS00161 Isocitrate lyase signature. 195 200 - T 21-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 VFU_RS13600 f350ee23ef053ab6ecbcee992cba3641 436 Pfam PF00463 Isocitrate lyase family 259 436 6.8E-53 T 21-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 VFU_RS13600 f350ee23ef053ab6ecbcee992cba3641 436 Pfam PF00463 Isocitrate lyase family 14 257 5.9E-62 T 21-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 VFU_RS13600 f350ee23ef053ab6ecbcee992cba3641 436 PANTHER PTHR21631 3 436 1.5E-171 T 21-04-2016 VFU_RS13600 f350ee23ef053ab6ecbcee992cba3641 436 Gene3D G3DSA:3.20.20.60 7 419 1.0E-168 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VFU_RS14335 c58d4b2120817b9dcc717649ac20c6b4 142 PIRSF PIRSF002181 1 142 4.6E-53 T 21-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 VFU_RS14335 c58d4b2120817b9dcc717649ac20c6b4 142 Gene3D G3DSA:3.90.1180.10 3 141 4.6E-66 T 21-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 VFU_RS14335 c58d4b2120817b9dcc717649ac20c6b4 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 21-04-2016 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 VFU_RS14335 c58d4b2120817b9dcc717649ac20c6b4 142 Pfam PF00572 Ribosomal protein L13 15 138 1.1E-57 T 21-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 VFU_RS14335 c58d4b2120817b9dcc717649ac20c6b4 142 PANTHER PTHR11545 1 142 5.1E-80 T 21-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 VFU_RS14335 c58d4b2120817b9dcc717649ac20c6b4 142 SUPERFAMILY SSF52161 1 140 5.23E-61 T 21-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 VFU_RS14335 c58d4b2120817b9dcc717649ac20c6b4 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.952 T 21-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 VFU_RS14335 c58d4b2120817b9dcc717649ac20c6b4 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 2.8E-65 T 21-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 VFU_RS07165 268d20524608133b44eec5efa2b71cbb 610 SMART SM00388 386 455 2.6E-9 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS07165 268d20524608133b44eec5efa2b71cbb 610 Gene3D G3DSA:3.40.190.10 138 244 4.0E-6 T 21-04-2016 VFU_RS07165 268d20524608133b44eec5efa2b71cbb 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 594 607 7.4E-9 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS07165 268d20524608133b44eec5efa2b71cbb 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 570 588 7.4E-9 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS07165 268d20524608133b44eec5efa2b71cbb 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 544 558 7.4E-9 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS07165 268d20524608133b44eec5efa2b71cbb 610 Pfam PF00512 His Kinase A (phospho-acceptor) domain 388 451 3.3E-10 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS07165 268d20524608133b44eec5efa2b71cbb 610 Gene3D G3DSA:3.30.565.10 454 608 1.4E-30 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS07165 268d20524608133b44eec5efa2b71cbb 610 SUPERFAMILY SSF53850 65 291 9.62E-17 T 21-04-2016 VFU_RS07165 268d20524608133b44eec5efa2b71cbb 610 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 52 292 3.9E-35 T 21-04-2016 VFU_RS07165 268d20524608133b44eec5efa2b71cbb 610 SUPERFAMILY SSF55874 444 608 1.31E-29 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS07165 268d20524608133b44eec5efa2b71cbb 610 Gene3D G3DSA:1.10.287.130 384 449 7.7E-6 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS07165 268d20524608133b44eec5efa2b71cbb 610 SUPERFAMILY SSF47384 379 451 1.82E-9 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS07165 268d20524608133b44eec5efa2b71cbb 610 SMART SM00387 497 610 6.6E-14 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS07165 268d20524608133b44eec5efa2b71cbb 610 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 498 607 5.4E-12 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS07165 268d20524608133b44eec5efa2b71cbb 610 PANTHER PTHR24423 365 607 3.4E-45 T 21-04-2016 VFU_RS07165 268d20524608133b44eec5efa2b71cbb 610 PANTHER PTHR24423 19 30 3.4E-45 T 21-04-2016 VFU_RS07165 268d20524608133b44eec5efa2b71cbb 610 PANTHER PTHR24423:SF485 365 607 3.4E-45 T 21-04-2016 VFU_RS07165 268d20524608133b44eec5efa2b71cbb 610 PANTHER PTHR24423:SF485 19 30 3.4E-45 T 21-04-2016 VFU_RS05345 0849520a30472d4b639e8a7a9eff80fd 112 PANTHER PTHR30115 1 112 2.1E-68 T 21-04-2016 VFU_RS05345 0849520a30472d4b639e8a7a9eff80fd 112 SMART SM00938 4 105 3.3E-69 T 21-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VFU_RS05345 0849520a30472d4b639e8a7a9eff80fd 112 Gene3D G3DSA:3.30.70.120 1 112 1.4E-51 T 21-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VFU_RS05345 0849520a30472d4b639e8a7a9eff80fd 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 21-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 VFU_RS05345 0849520a30472d4b639e8a7a9eff80fd 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.5E-44 T 21-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VFU_RS05345 0849520a30472d4b639e8a7a9eff80fd 112 PIRSF PIRSF039144 1 112 2.3E-58 T 21-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VFU_RS05345 0849520a30472d4b639e8a7a9eff80fd 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 21-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 VFU_RS05345 0849520a30472d4b639e8a7a9eff80fd 112 PRINTS PR00340 P-II protein signature 83 103 1.1E-43 T 21-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VFU_RS05345 0849520a30472d4b639e8a7a9eff80fd 112 PRINTS PR00340 P-II protein signature 52 75 1.1E-43 T 21-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VFU_RS05345 0849520a30472d4b639e8a7a9eff80fd 112 PRINTS PR00340 P-II protein signature 2 17 1.1E-43 T 21-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VFU_RS05345 0849520a30472d4b639e8a7a9eff80fd 112 PRINTS PR00340 P-II protein signature 23 41 1.1E-43 T 21-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VFU_RS05345 0849520a30472d4b639e8a7a9eff80fd 112 SUPERFAMILY SSF54913 1 112 6.35E-47 T 21-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta VFU_RS02495 faa3bde874ea819f86418cd69bd93b77 852 SUPERFAMILY SSF141868 597 845 6.8E-83 T 21-04-2016 IPR001633 EAL domain VFU_RS02495 faa3bde874ea819f86418cd69bd93b77 852 Pfam PF00990 Diguanylate cyclase, GGDEF domain 429 573 7.8E-27 T 21-04-2016 IPR000160 GGDEF domain VFU_RS02495 faa3bde874ea819f86418cd69bd93b77 852 SMART SM00052 590 838 4.2E-101 T 21-04-2016 IPR001633 EAL domain VFU_RS02495 faa3bde874ea819f86418cd69bd93b77 852 Gene3D G3DSA:3.30.450.20 164 218 4.1E-13 T 21-04-2016 VFU_RS02495 faa3bde874ea819f86418cd69bd93b77 852 Gene3D G3DSA:3.30.450.20 83 131 4.1E-13 T 21-04-2016 VFU_RS02495 faa3bde874ea819f86418cd69bd93b77 852 Pfam PF02743 Cache domain 148 328 1.7E-17 T 21-04-2016 IPR033479 Double Cache domain 1 VFU_RS02495 faa3bde874ea819f86418cd69bd93b77 852 Pfam PF00563 EAL domain 599 833 1.4E-67 T 21-04-2016 IPR001633 EAL domain VFU_RS02495 faa3bde874ea819f86418cd69bd93b77 852 SUPERFAMILY SSF55073 432 574 6.51E-29 T 21-04-2016 IPR029787 Nucleotide cyclase VFU_RS02495 faa3bde874ea819f86418cd69bd93b77 852 SMART SM00267 416 580 2.0E-28 T 21-04-2016 IPR000160 GGDEF domain VFU_RS02495 faa3bde874ea819f86418cd69bd93b77 852 Gene3D G3DSA:3.20.20.450 593 840 2.5E-89 T 21-04-2016 IPR001633 EAL domain VFU_RS02495 faa3bde874ea819f86418cd69bd93b77 852 PANTHER PTHR33121:SF13 536 848 2.8E-75 T 21-04-2016 VFU_RS02495 faa3bde874ea819f86418cd69bd93b77 852 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 426 574 6.9E-19 T 21-04-2016 IPR000160 GGDEF domain VFU_RS02495 faa3bde874ea819f86418cd69bd93b77 852 Gene3D G3DSA:3.30.70.270 429 585 1.8E-30 T 21-04-2016 VFU_RS02495 faa3bde874ea819f86418cd69bd93b77 852 PANTHER PTHR33121 536 848 2.8E-75 T 21-04-2016 VFU_RS10540 384d320cb392def82c5e0719c7dd5ab5 153 PANTHER PTHR12714:SF7 12 153 8.5E-23 T 21-04-2016 VFU_RS10540 384d320cb392def82c5e0719c7dd5ab5 153 Pfam PF04191 Phospholipid methyltransferase 43 141 1.9E-13 T 21-04-2016 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|UniPathway: UPA00753 VFU_RS10540 384d320cb392def82c5e0719c7dd5ab5 153 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 108 153 9.0E-11 T 21-04-2016 VFU_RS10540 384d320cb392def82c5e0719c7dd5ab5 153 PANTHER PTHR12714 12 153 8.5E-23 T 21-04-2016 VFU_RS05185 fad7ad7a97bb9ccf28c70afe53a8ffdb 385 SMART SM00359 292 375 7.3E-23 T 21-04-2016 IPR002478 PUA domain GO:0003723 VFU_RS05185 fad7ad7a97bb9ccf28c70afe53a8ffdb 385 Hamap MF_00456 Glutamate 5-kinase [proB]. 20 273 35.831 T 21-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 VFU_RS05185 fad7ad7a97bb9ccf28c70afe53a8ffdb 385 PANTHER PTHR11063 20 385 7.6E-136 T 21-04-2016 VFU_RS05185 fad7ad7a97bb9ccf28c70afe53a8ffdb 385 Pfam PF00696 Amino acid kinase family 21 249 2.4E-42 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VFU_RS05185 fad7ad7a97bb9ccf28c70afe53a8ffdb 385 SUPERFAMILY SSF88697 292 382 8.84E-25 T 21-04-2016 IPR015947 PUA-like domain VFU_RS05185 fad7ad7a97bb9ccf28c70afe53a8ffdb 385 TIGRFAM TIGR01027 proB: glutamate 5-kinase 20 382 3.1E-149 T 21-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 VFU_RS05185 fad7ad7a97bb9ccf28c70afe53a8ffdb 385 ProSitePatterns PS00902 Glutamate 5-kinase signature. 222 239 - T 21-04-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 VFU_RS05185 fad7ad7a97bb9ccf28c70afe53a8ffdb 385 SUPERFAMILY SSF53633 21 271 2.09E-65 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VFU_RS05185 fad7ad7a97bb9ccf28c70afe53a8ffdb 385 Gene3D G3DSA:2.30.130.10 290 381 8.0E-27 T 21-04-2016 IPR015947 PUA-like domain VFU_RS05185 fad7ad7a97bb9ccf28c70afe53a8ffdb 385 PRINTS PR00474 Glutamate 5-kinase family signature 57 71 1.9E-54 T 21-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 VFU_RS05185 fad7ad7a97bb9ccf28c70afe53a8ffdb 385 PRINTS PR00474 Glutamate 5-kinase family signature 224 244 1.9E-54 T 21-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 VFU_RS05185 fad7ad7a97bb9ccf28c70afe53a8ffdb 385 PRINTS PR00474 Glutamate 5-kinase family signature 91 119 1.9E-54 T 21-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 VFU_RS05185 fad7ad7a97bb9ccf28c70afe53a8ffdb 385 PRINTS PR00474 Glutamate 5-kinase family signature 131 152 1.9E-54 T 21-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 VFU_RS05185 fad7ad7a97bb9ccf28c70afe53a8ffdb 385 PRINTS PR00474 Glutamate 5-kinase family signature 163 190 1.9E-54 T 21-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 VFU_RS05185 fad7ad7a97bb9ccf28c70afe53a8ffdb 385 Gene3D G3DSA:3.40.1160.10 19 275 8.2E-58 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VFU_RS05185 fad7ad7a97bb9ccf28c70afe53a8ffdb 385 PIRSF PIRSF000729 16 384 6.2E-139 T 21-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 VFU_RS05185 fad7ad7a97bb9ccf28c70afe53a8ffdb 385 Pfam PF01472 PUA domain 292 364 6.2E-26 T 21-04-2016 IPR002478 PUA domain GO:0003723 VFU_RS02300 fb495fdf56f18f8b65afa86fd05b2452 165 SUPERFAMILY SSF52799 14 160 2.04E-32 T 21-04-2016 IPR029021 Protein-tyrosine phosphatase-like VFU_RS02300 fb495fdf56f18f8b65afa86fd05b2452 165 Pfam PF05706 Cyclin-dependent kinase inhibitor 3 (CDKN3) 32 129 8.9E-10 T 21-04-2016 IPR022778 CDKN3 domain GO:0004721|GO:0004725 KEGG: 04660+3.1.3.16 VFU_RS02300 fb495fdf56f18f8b65afa86fd05b2452 165 Gene3D G3DSA:3.90.190.10 14 161 6.4E-35 T 21-04-2016 IPR029021 Protein-tyrosine phosphatase-like VFU_RS02300 fb495fdf56f18f8b65afa86fd05b2452 165 PANTHER PTHR23339 21 158 1.2E-21 T 21-04-2016 VFU_RS02300 fb495fdf56f18f8b65afa86fd05b2452 165 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 109 119 - T 21-04-2016 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311|GO:0016791 VFU_RS02300 fb495fdf56f18f8b65afa86fd05b2452 165 PANTHER PTHR23339:SF64 21 158 1.2E-21 T 21-04-2016 VFU_RS08375 9e0341034279d7538d76ca77dbc66798 578 SMART SM00490 262 344 1.6E-11 T 21-04-2016 IPR001650 Helicase, C-terminal VFU_RS08375 9e0341034279d7538d76ca77dbc66798 578 SUPERFAMILY SSF57829 425 465 2.38E-6 T 21-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 VFU_RS08375 9e0341034279d7538d76ca77dbc66798 578 Gene3D G3DSA:3.40.50.300 236 363 2.4E-22 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS08375 9e0341034279d7538d76ca77dbc66798 578 Gene3D G3DSA:3.40.50.300 2 154 4.1E-31 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS08375 9e0341034279d7538d76ca77dbc66798 578 SUPERFAMILY SSF52540 48 188 1.01E-38 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS08375 9e0341034279d7538d76ca77dbc66798 578 SUPERFAMILY SSF52540 236 362 1.01E-38 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS08375 9e0341034279d7538d76ca77dbc66798 578 PANTHER PTHR24031 232 366 2.2E-153 T 21-04-2016 VFU_RS08375 9e0341034279d7538d76ca77dbc66798 578 PANTHER PTHR24031 1 162 2.2E-153 T 21-04-2016 VFU_RS08375 9e0341034279d7538d76ca77dbc66798 578 PANTHER PTHR24031 186 196 2.2E-153 T 21-04-2016 VFU_RS08375 9e0341034279d7538d76ca77dbc66798 578 PANTHER PTHR24031 443 573 2.2E-153 T 21-04-2016 VFU_RS08375 9e0341034279d7538d76ca77dbc66798 578 PANTHER PTHR24031:SF319 232 366 2.2E-153 T 21-04-2016 VFU_RS08375 9e0341034279d7538d76ca77dbc66798 578 PANTHER PTHR24031:SF319 1 162 2.2E-153 T 21-04-2016 VFU_RS08375 9e0341034279d7538d76ca77dbc66798 578 PANTHER PTHR24031:SF319 186 196 2.2E-153 T 21-04-2016 VFU_RS08375 9e0341034279d7538d76ca77dbc66798 578 PANTHER PTHR24031:SF319 443 573 2.2E-153 T 21-04-2016 VFU_RS08375 9e0341034279d7538d76ca77dbc66798 578 SMART SM00487 1 178 6.6E-13 T 21-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VFU_RS08375 9e0341034279d7538d76ca77dbc66798 578 Pfam PF04851 Type III restriction enzyme, res subunit 2 154 2.0E-23 T 21-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VFU_RS08375 9e0341034279d7538d76ca77dbc66798 578 Pfam PF00271 Helicase conserved C-terminal domain 239 343 1.2E-14 T 21-04-2016 IPR001650 Helicase, C-terminal VFU_RS01095 a69e6fdd8f321831b4b98c4e37ab5f7a 245 Pfam PF11726 Protein of unknown function (DUF3296) 40 220 1.6E-41 T 21-04-2016 IPR021723 Inovirus Gp2 VFU_RS03635 d73aee9f746e4266447384432ebe89cf 185 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 23 175 1.6E-62 T 21-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 VFU_RS03635 d73aee9f746e4266447384432ebe89cf 185 Pfam PF08282 haloacid dehalogenase-like hydrolase 92 157 1.3E-8 T 21-04-2016 IPR023214 HAD-like domain VFU_RS03635 d73aee9f746e4266447384432ebe89cf 185 PIRSF PIRSF006118 10 185 1.2E-73 T 21-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 VFU_RS03635 d73aee9f746e4266447384432ebe89cf 185 SUPERFAMILY SSF56784 21 178 7.75E-40 T 21-04-2016 IPR023214 HAD-like domain VFU_RS03635 d73aee9f746e4266447384432ebe89cf 185 Gene3D G3DSA:3.40.50.1000 14 175 9.9E-45 T 21-04-2016 IPR023214 HAD-like domain VFU_RS03635 d73aee9f746e4266447384432ebe89cf 185 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 24 137 1.3E-13 T 21-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA VFU_RS03635 d73aee9f746e4266447384432ebe89cf 185 PANTHER PTHR21485 9 181 1.3E-61 T 21-04-2016 VFU_RS11240 b94909678410fe8e4ea8935d9902166e 560 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 393 544 8.1E-37 T 21-04-2016 IPR006512 YidE/YbjL duplication VFU_RS11240 b94909678410fe8e4ea8935d9902166e 560 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 21 172 9.5E-31 T 21-04-2016 IPR006512 YidE/YbjL duplication VFU_RS11240 b94909678410fe8e4ea8935d9902166e 560 Pfam PF02080 TrkA-C domain 309 374 2.9E-9 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VFU_RS11240 b94909678410fe8e4ea8935d9902166e 560 Pfam PF02080 TrkA-C domain 230 281 1.1E-8 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VFU_RS11240 b94909678410fe8e4ea8935d9902166e 560 PANTHER PTHR30445:SF4 3 559 0.0 T 21-04-2016 VFU_RS11240 b94909678410fe8e4ea8935d9902166e 560 SUPERFAMILY SSF116726 294 377 1.96E-10 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VFU_RS11240 b94909678410fe8e4ea8935d9902166e 560 Gene3D G3DSA:3.30.70.1450 308 377 1.2E-7 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VFU_RS11240 b94909678410fe8e4ea8935d9902166e 560 PANTHER PTHR30445 3 559 0.0 T 21-04-2016 VFU_RS11240 b94909678410fe8e4ea8935d9902166e 560 Gene3D G3DSA:3.30.70.1450 231 289 5.2E-8 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VFU_RS11240 b94909678410fe8e4ea8935d9902166e 560 Pfam PF06826 Predicted Permease Membrane Region 17 185 1.8E-38 T 21-04-2016 IPR006512 YidE/YbjL duplication VFU_RS11240 b94909678410fe8e4ea8935d9902166e 560 Pfam PF06826 Predicted Permease Membrane Region 389 557 1.7E-42 T 21-04-2016 IPR006512 YidE/YbjL duplication VFU_RS11240 b94909678410fe8e4ea8935d9902166e 560 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 560 58.49 T 21-04-2016 IPR023017 Transport protein YbjL, putative VFU_RS11240 b94909678410fe8e4ea8935d9902166e 560 SUPERFAMILY SSF116726 230 285 2.75E-10 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VFU_RS10300 732097d03a586119d827f4db8726c87b 203 SMART SM00903 19 167 7.8E-5 T 21-04-2016 IPR002563 Flavin reductase like domain GO:0010181 VFU_RS10300 732097d03a586119d827f4db8726c87b 203 Gene3D G3DSA:2.30.110.10 12 191 4.3E-54 T 21-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 VFU_RS10300 732097d03a586119d827f4db8726c87b 203 Pfam PF01613 Flavin reductase like domain 22 163 3.9E-17 T 21-04-2016 IPR002563 Flavin reductase like domain GO:0010181 VFU_RS10300 732097d03a586119d827f4db8726c87b 203 SUPERFAMILY SSF50475 1 198 1.13E-35 T 21-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 VFU_RS10300 732097d03a586119d827f4db8726c87b 203 PANTHER PTHR33798:SF1 1 202 1.4E-55 T 21-04-2016 VFU_RS10300 732097d03a586119d827f4db8726c87b 203 PANTHER PTHR33798 1 202 1.4E-55 T 21-04-2016 VFU_RS06445 42775f5323bc6354b55da09cb4beebd4 211 PANTHER PTHR33508 1 210 8.1E-92 T 21-04-2016 VFU_RS06445 42775f5323bc6354b55da09cb4beebd4 211 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 5 203 8.2E-67 T 21-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VFU_RS06445 42775f5323bc6354b55da09cb4beebd4 211 PANTHER PTHR33508:SF1 1 210 8.1E-92 T 21-04-2016 VFU_RS06445 42775f5323bc6354b55da09cb4beebd4 211 Pfam PF01914 MarC family integral membrane protein 6 207 5.1E-65 T 21-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VFU_RS03450 04c48511a1c7893de311e905f2216e51 653 Gene3D G3DSA:3.60.21.10 19 365 3.1E-96 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like VFU_RS03450 04c48511a1c7893de311e905f2216e51 653 Pfam PF02872 5'-nucleotidase, C-terminal domain 362 554 9.3E-23 T 21-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 VFU_RS03450 04c48511a1c7893de311e905f2216e51 653 PANTHER PTHR11575 1 651 0.0 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VFU_RS03450 04c48511a1c7893de311e905f2216e51 653 Pfam PF00149 Calcineurin-like phosphoesterase 30 265 1.9E-10 T 21-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 VFU_RS03450 04c48511a1c7893de311e905f2216e51 653 Gene3D G3DSA:3.90.780.10 366 602 8.2E-41 T 21-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 VFU_RS03450 04c48511a1c7893de311e905f2216e51 653 ProSitePatterns PS00786 5'-nucleotidase signature 2. 115 126 - T 21-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 VFU_RS03450 04c48511a1c7893de311e905f2216e51 653 SUPERFAMILY SSF56300 23 360 9.49E-89 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like VFU_RS03450 04c48511a1c7893de311e905f2216e51 653 PRINTS PR01607 Apyrase family signature 434 457 5.6E-30 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VFU_RS03450 04c48511a1c7893de311e905f2216e51 653 PRINTS PR01607 Apyrase family signature 289 309 5.6E-30 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VFU_RS03450 04c48511a1c7893de311e905f2216e51 653 PRINTS PR01607 Apyrase family signature 28 46 5.6E-30 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VFU_RS03450 04c48511a1c7893de311e905f2216e51 653 PRINTS PR01607 Apyrase family signature 536 555 5.6E-30 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VFU_RS03450 04c48511a1c7893de311e905f2216e51 653 PRINTS PR01607 Apyrase family signature 249 272 5.6E-30 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VFU_RS03450 04c48511a1c7893de311e905f2216e51 653 PRINTS PR01607 Apyrase family signature 221 238 5.6E-30 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VFU_RS03450 04c48511a1c7893de311e905f2216e51 653 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 29 652 0.0 T 21-04-2016 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 VFU_RS03450 04c48511a1c7893de311e905f2216e51 653 SUPERFAMILY SSF55816 361 603 1.44E-37 T 21-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 VFU_RS03450 04c48511a1c7893de311e905f2216e51 653 PANTHER PTHR11575:SF6 1 651 0.0 T 21-04-2016 VFU_RS06770 7c7903b363dd79f63714868407a60315 261 SUPERFAMILY SSF117143 92 222 2.09E-35 T 21-04-2016 VFU_RS06770 7c7903b363dd79f63714868407a60315 261 PANTHER PTHR30435:SF19 1 259 1.7E-122 T 21-04-2016 VFU_RS06770 7c7903b363dd79f63714868407a60315 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 148 243 6.0E-32 T 21-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G VFU_RS06770 7c7903b363dd79f63714868407a60315 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 136 2.1E-45 T 21-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G VFU_RS06770 7c7903b363dd79f63714868407a60315 261 Pfam PF00460 Flagella basal body rod protein 5 35 4.4E-11 T 21-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VFU_RS06770 7c7903b363dd79f63714868407a60315 261 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 21-04-2016 IPR019776 Flagellar basal body rod protein, conserved site VFU_RS06770 7c7903b363dd79f63714868407a60315 261 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 5.9E-117 T 21-04-2016 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 VFU_RS06770 7c7903b363dd79f63714868407a60315 261 PANTHER PTHR30435 1 259 1.7E-122 T 21-04-2016 VFU_RS06770 7c7903b363dd79f63714868407a60315 261 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 258 7.6E-27 T 21-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VFU_RS04050 7b6cd0dad841be662e11b2c2118e0a52 158 Pfam PF04073 Aminoacyl-tRNA editing domain 28 146 7.4E-26 T 21-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VFU_RS04050 7b6cd0dad841be662e11b2c2118e0a52 158 Gene3D G3DSA:3.90.960.10 6 156 3.7E-39 T 21-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VFU_RS04050 7b6cd0dad841be662e11b2c2118e0a52 158 SUPERFAMILY SSF55826 6 155 9.94E-36 T 21-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VFU_RS04050 7b6cd0dad841be662e11b2c2118e0a52 158 PANTHER PTHR30411 7 155 5.1E-22 T 21-04-2016 VFU_RS14845 479edeea5eca4a3a3bb5f54ad08b32f9 345 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 331 8.0E-151 T 21-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 VFU_RS14845 479edeea5eca4a3a3bb5f54ad08b32f9 345 SUPERFAMILY SSF52540 5 336 6.46E-77 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS14845 479edeea5eca4a3a3bb5f54ad08b32f9 345 Gene3D G3DSA:3.40.50.300 100 338 1.1E-73 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS14845 479edeea5eca4a3a3bb5f54ad08b32f9 345 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 21-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VFU_RS14845 479edeea5eca4a3a3bb5f54ad08b32f9 345 PANTHER PTHR30486 1 339 5.2E-195 T 21-04-2016 VFU_RS14845 479edeea5eca4a3a3bb5f54ad08b32f9 345 PANTHER PTHR30486:SF6 1 339 5.2E-195 T 21-04-2016 VFU_RS14845 479edeea5eca4a3a3bb5f54ad08b32f9 345 Pfam PF00437 Type II/IV secretion system protein 12 270 1.8E-45 T 21-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VFU_RS05370 72b5b928557bbcae0081e7cc686b08ef 244 PANTHER PTHR10108 72 223 8.4E-80 T 21-04-2016 VFU_RS05370 72b5b928557bbcae0081e7cc686b08ef 244 PANTHER PTHR10108:SF836 72 223 8.4E-80 T 21-04-2016 VFU_RS05370 72b5b928557bbcae0081e7cc686b08ef 244 Gene3D G3DSA:3.40.50.150 75 213 1.3E-17 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS05370 72b5b928557bbcae0081e7cc686b08ef 244 SUPERFAMILY SSF53335 73 212 2.67E-20 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS05370 72b5b928557bbcae0081e7cc686b08ef 244 Pfam PF08241 Methyltransferase domain 74 125 3.5E-10 T 21-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 VFU_RS11355 52bc725de355584f939952552e5ead82 796 SUPERFAMILY SSF47384 328 407 3.92E-18 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS11355 52bc725de355584f939952552e5ead82 796 Gene3D G3DSA:1.10.287.130 335 392 1.8E-14 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS11355 52bc725de355584f939952552e5ead82 796 SUPERFAMILY SSF55874 395 565 1.24E-43 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS11355 52bc725de355584f939952552e5ead82 796 SUPERFAMILY SSF52172 585 714 3.27E-29 T 21-04-2016 IPR011006 CheY-like superfamily VFU_RS11355 52bc725de355584f939952552e5ead82 796 Pfam PF00072 Response regulator receiver domain 589 701 1.9E-19 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS11355 52bc725de355584f939952552e5ead82 796 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 454 564 2.5E-29 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS11355 52bc725de355584f939952552e5ead82 796 Pfam PF00512 His Kinase A (phospho-acceptor) domain 341 406 2.2E-17 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS11355 52bc725de355584f939952552e5ead82 796 SMART SM00388 341 406 1.7E-21 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS11355 52bc725de355584f939952552e5ead82 796 Gene3D G3DSA:3.30.565.10 393 569 2.6E-45 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS11355 52bc725de355584f939952552e5ead82 796 Gene3D G3DSA:3.30.450.20 114 186 2.1E-9 T 21-04-2016 VFU_RS11355 52bc725de355584f939952552e5ead82 796 Gene3D G3DSA:3.40.50.2300 585 705 3.1E-32 T 21-04-2016 VFU_RS11355 52bc725de355584f939952552e5ead82 796 SMART SM00387 453 568 3.0E-36 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS11355 52bc725de355584f939952552e5ead82 796 SMART SM00448 587 701 3.3E-23 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS11355 52bc725de355584f939952552e5ead82 796 PANTHER PTHR24423 23 37 7.3E-131 T 21-04-2016 VFU_RS11355 52bc725de355584f939952552e5ead82 796 PANTHER PTHR24423 276 747 7.3E-131 T 21-04-2016 VFU_RS11355 52bc725de355584f939952552e5ead82 796 PRINTS PR00344 Bacterial sensor protein C-terminal signature 552 565 7.0E-17 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS11355 52bc725de355584f939952552e5ead82 796 PRINTS PR00344 Bacterial sensor protein C-terminal signature 528 546 7.0E-17 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS11355 52bc725de355584f939952552e5ead82 796 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 521 7.0E-17 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS11355 52bc725de355584f939952552e5ead82 796 PRINTS PR00344 Bacterial sensor protein C-terminal signature 493 507 7.0E-17 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS01940 ec0608092e3d231c967869ca54a21869 370 PANTHER PTHR22976 3 365 1.2E-205 T 21-04-2016 VFU_RS01940 ec0608092e3d231c967869ca54a21869 370 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 3 366 8.5E-171 T 21-04-2016 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892|UniPathway: UPA00060 VFU_RS01940 ec0608092e3d231c967869ca54a21869 370 Gene3D G3DSA:3.20.20.70 37 358 5.6E-46 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS01940 ec0608092e3d231c967869ca54a21869 370 PANTHER PTHR22976:SF17 3 365 1.2E-205 T 21-04-2016 VFU_RS01940 ec0608092e3d231c967869ca54a21869 370 SUPERFAMILY SSF102114 37 343 2.35E-53 T 21-04-2016 VFU_RS01940 ec0608092e3d231c967869ca54a21869 370 Pfam PF04055 Radical SAM superfamily 81 219 5.2E-10 T 21-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VFU_RS01940 ec0608092e3d231c967869ca54a21869 370 SMART SM00876 256 359 9.6E-30 T 21-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 VFU_RS01940 ec0608092e3d231c967869ca54a21869 370 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 256 358 4.1E-23 T 21-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 VFU_RS06705 8dfe3d81744c450fd0b3f9ad13b713ba 196 PANTHER PTHR30055 1 196 2.3E-91 T 21-04-2016 VFU_RS06705 8dfe3d81744c450fd0b3f9ad13b713ba 196 PANTHER PTHR30055:SF85 1 196 2.3E-91 T 21-04-2016 VFU_RS06705 8dfe3d81744c450fd0b3f9ad13b713ba 196 SUPERFAMILY SSF48498 82 195 2.36E-20 T 21-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal VFU_RS06705 8dfe3d81744c450fd0b3f9ad13b713ba 196 SUPERFAMILY SSF46689 4 73 8.74E-6 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS06705 8dfe3d81744c450fd0b3f9ad13b713ba 196 Pfam PF13305 WHG domain 93 172 3.1E-11 T 21-04-2016 IPR025996 WHG domain VFU_RS06705 8dfe3d81744c450fd0b3f9ad13b713ba 196 Gene3D G3DSA:1.10.357.10 2 196 4.9E-30 T 21-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 VFU_RS02755 1661c246e8bb22dd3c0977cef0d0dc35 581 Pfam PF02080 TrkA-C domain 418 484 1.8E-11 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VFU_RS02755 1661c246e8bb22dd3c0977cef0d0dc35 581 PANTHER PTHR32507:SF7 1 575 3.1E-285 T 21-04-2016 IPR030151 K(+)/H(+) antiporter NhaP GO:0005451|GO:0006813|GO:0016021 VFU_RS02755 1661c246e8bb22dd3c0977cef0d0dc35 581 Gene3D G3DSA:3.30.70.1450 422 485 9.3E-7 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VFU_RS02755 1661c246e8bb22dd3c0977cef0d0dc35 581 SMART SM01091 493 572 7.6E-11 T 21-04-2016 IPR005170 Transporter-associated domain VFU_RS02755 1661c246e8bb22dd3c0977cef0d0dc35 581 Pfam PF00999 Sodium/hydrogen exchanger family 15 386 6.0E-56 T 21-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VFU_RS02755 1661c246e8bb22dd3c0977cef0d0dc35 581 Hamap MF_01075 K(+)/H(+) antiporter NhaP2 [nhaP2]. 1 575 51.034 T 21-04-2016 IPR023729 K(+)/H(+) antiporter NhaP2 GO:0005451|GO:0006812|GO:0006813|GO:0006884|GO:0016021 VFU_RS02755 1661c246e8bb22dd3c0977cef0d0dc35 581 SUPERFAMILY SSF116726 412 484 1.01E-9 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VFU_RS02755 1661c246e8bb22dd3c0977cef0d0dc35 581 Pfam PF03471 Transporter associated domain 497 570 9.3E-8 T 21-04-2016 IPR005170 Transporter-associated domain VFU_RS02755 1661c246e8bb22dd3c0977cef0d0dc35 581 Gene3D G3DSA:3.30.465.10 500 569 7.9E-9 T 21-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 VFU_RS02755 1661c246e8bb22dd3c0977cef0d0dc35 581 SUPERFAMILY SSF56176 499 570 9.27E-10 T 21-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 VFU_RS02755 1661c246e8bb22dd3c0977cef0d0dc35 581 PANTHER PTHR32507 1 575 3.1E-285 T 21-04-2016 VFU_RS09165 46ecba771b643deb509153829bdad5f7 782 Gene3D G3DSA:3.40.50.300 459 588 1.8E-7 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS09165 46ecba771b643deb509153829bdad5f7 782 SUPERFAMILY SSF52540 457 635 2.05E-11 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS10600 f4e70f0f5a5c999079732f3c723a679f 289 PANTHER PTHR23088:SF11 1 286 2.8E-135 T 21-04-2016 VFU_RS10600 f4e70f0f5a5c999079732f3c723a679f 289 TIGRFAM TIGR03381 agmatine_aguB: N-carbamoylputrescine amidase 5 282 1.0E-139 T 21-04-2016 IPR017755 N-carbamoylputrescine amidase GO:0006596|GO:0050126 KEGG: 00330+3.5.1.53|MetaCyc: PWY-43|UniPathway: UPA00534 VFU_RS10600 f4e70f0f5a5c999079732f3c723a679f 289 PANTHER PTHR23088 1 286 2.8E-135 T 21-04-2016 VFU_RS10600 f4e70f0f5a5c999079732f3c723a679f 289 Pfam PF00795 Carbon-nitrogen hydrolase 8 266 1.2E-57 T 21-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VFU_RS10600 f4e70f0f5a5c999079732f3c723a679f 289 Gene3D G3DSA:3.60.110.10 3 282 1.1E-96 T 21-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VFU_RS10600 f4e70f0f5a5c999079732f3c723a679f 289 SUPERFAMILY SSF56317 3 282 1.15E-83 T 21-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VFU_RS04035 815ae6f87ae099e1be339311c71ca70c 394 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 8 389 2.5E-122 T 21-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 VFU_RS04035 815ae6f87ae099e1be339311c71ca70c 394 PANTHER PTHR13789 1 394 2.8E-178 T 21-04-2016 VFU_RS04035 815ae6f87ae099e1be339311c71ca70c 394 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 298 311 - T 21-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 VFU_RS04035 815ae6f87ae099e1be339311c71ca70c 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 1.8E-10 T 21-04-2016 VFU_RS04035 815ae6f87ae099e1be339311c71ca70c 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 160 175 1.8E-10 T 21-04-2016 VFU_RS04035 815ae6f87ae099e1be339311c71ca70c 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 284 299 1.8E-10 T 21-04-2016 VFU_RS04035 815ae6f87ae099e1be339311c71ca70c 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 299 315 1.8E-10 T 21-04-2016 VFU_RS04035 815ae6f87ae099e1be339311c71ca70c 394 Gene3D G3DSA:3.50.50.60 6 186 2.6E-34 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS04035 815ae6f87ae099e1be339311c71ca70c 394 Gene3D G3DSA:3.50.50.60 272 356 2.6E-34 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS04035 815ae6f87ae099e1be339311c71ca70c 394 SUPERFAMILY SSF51905 7 181 1.82E-50 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS04035 815ae6f87ae099e1be339311c71ca70c 394 SUPERFAMILY SSF51905 271 384 1.82E-50 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS04035 815ae6f87ae099e1be339311c71ca70c 394 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 8 390 1.1E-149 T 21-04-2016 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 KEGG: 00130+1.14.13.-|KEGG: 00140+1.14.13.-|KEGG: 00232+1.14.13.-|KEGG: 00261+1.14.13.-|KEGG: 00340+1.14.13.-|KEGG: 00360+1.14.13.-|KEGG: 00361+1.14.13.-|KEGG: 00362+1.14.13.-|KEGG: 00363+1.14.13.-|KEGG: 00380+1.14.13.-|KEGG: 00403+1.14.13.-|KEGG: 00590+1.14.13.-|KEGG: 00591+1.14.13.-|KEGG: 00622+1.14.13.-|KEGG: 00623+1.14.13.-|KEGG: 00624+1.14.13.-|KEGG: 00625+1.14.13.-|KEGG: 00626+1.14.13.-|KEGG: 00627+1.14.13.-|KEGG: 00640+1.14.13.-|KEGG: 00643+1.14.13.-|KEGG: 00830+1.14.13.-|KEGG: 00903+1.14.13.-|KEGG: 00904+1.14.13.-|KEGG: 00905+1.14.13.-|KEGG: 00906+1.14.13.-|KEGG: 00930+1.14.13.-|KEGG: 00940+1.14.13.-|KEGG: 00941+1.14.13.-|KEGG: 00943+1.14.13.-|KEGG: 00945+1.14.13.-|KEGG: 00950+1.14.13.-|KEGG: 00966+1.14.13.-|KEGG: 00980+1.14.13.-|KEGG: 00982+1.14.13.-|KEGG: 00983+1.14.13.-|UniPathway: UPA00232 VFU_RS04035 815ae6f87ae099e1be339311c71ca70c 394 PANTHER PTHR13789:SF214 1 394 2.8E-178 T 21-04-2016 VFU_RS04035 815ae6f87ae099e1be339311c71ca70c 394 Pfam PF01494 FAD binding domain 7 321 1.2E-24 T 21-04-2016 IPR002938 FAD-binding domain GO:0071949 VFU_RS07595 47696be569fb7f7fc0705d8ae049b91e 713 Gene3D G3DSA:3.40.50.10750 523 681 1.7E-68 T 21-04-2016 VFU_RS07595 47696be569fb7f7fc0705d8ae049b91e 713 SUPERFAMILY SSF75138 228 352 1.24E-24 T 21-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like VFU_RS07595 47696be569fb7f7fc0705d8ae049b91e 713 SUPERFAMILY SSF53659 391 708 2.59E-96 T 21-04-2016 VFU_RS07595 47696be569fb7f7fc0705d8ae049b91e 713 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 405 705 5.8E-133 T 21-04-2016 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 VFU_RS07595 47696be569fb7f7fc0705d8ae049b91e 713 PANTHER PTHR23406:SF3 182 713 4.3E-56 T 21-04-2016 VFU_RS07595 47696be569fb7f7fc0705d8ae049b91e 713 PIRSF PIRSF006107 1 713 0.0 T 21-04-2016 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 VFU_RS07595 47696be569fb7f7fc0705d8ae049b91e 713 Pfam PF13500 AAA domain 3 228 5.3E-49 T 21-04-2016 VFU_RS07595 47696be569fb7f7fc0705d8ae049b91e 713 Pfam PF07085 DRTGG domain 232 343 5.9E-28 T 21-04-2016 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 VFU_RS07595 47696be569fb7f7fc0705d8ae049b91e 713 Gene3D G3DSA:3.40.50.300 2 222 7.4E-10 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS07595 47696be569fb7f7fc0705d8ae049b91e 713 PANTHER PTHR23406 182 713 4.3E-56 T 21-04-2016 VFU_RS07595 47696be569fb7f7fc0705d8ae049b91e 713 SUPERFAMILY SSF52540 1 239 2.66E-27 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS07595 47696be569fb7f7fc0705d8ae049b91e 713 Pfam PF01515 Phosphate acetyl/butaryl transferase 390 705 3.5E-125 T 21-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 VFU_RS07595 47696be569fb7f7fc0705d8ae049b91e 713 Gene3D G3DSA:3.40.1390.20 224 364 4.9E-30 T 21-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like VFU_RS03175 8a482189b5f601ecc9b05c7940ad0af6 192 PRINTS PR00097 Anthranilate synthase component II signature 2 16 4.64E-36 T 21-04-2016 VFU_RS03175 8a482189b5f601ecc9b05c7940ad0af6 192 PRINTS PR00097 Anthranilate synthase component II signature 99 107 4.64E-36 T 21-04-2016 VFU_RS03175 8a482189b5f601ecc9b05c7940ad0af6 192 PRINTS PR00097 Anthranilate synthase component II signature 119 131 4.64E-36 T 21-04-2016 VFU_RS03175 8a482189b5f601ecc9b05c7940ad0af6 192 PRINTS PR00097 Anthranilate synthase component II signature 74 85 4.64E-36 T 21-04-2016 VFU_RS03175 8a482189b5f601ecc9b05c7940ad0af6 192 PRINTS PR00097 Anthranilate synthase component II signature 47 56 4.64E-36 T 21-04-2016 VFU_RS03175 8a482189b5f601ecc9b05c7940ad0af6 192 PRINTS PR00097 Anthranilate synthase component II signature 169 182 4.64E-36 T 21-04-2016 VFU_RS03175 8a482189b5f601ecc9b05c7940ad0af6 192 PANTHER PTHR11922 1 191 1.1E-93 T 21-04-2016 VFU_RS03175 8a482189b5f601ecc9b05c7940ad0af6 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 3.58E-5 T 21-04-2016 VFU_RS03175 8a482189b5f601ecc9b05c7940ad0af6 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 3.58E-5 T 21-04-2016 VFU_RS03175 8a482189b5f601ecc9b05c7940ad0af6 192 Pfam PF00117 Glutamine amidotransferase class-I 4 190 3.1E-53 T 21-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 VFU_RS03175 8a482189b5f601ecc9b05c7940ad0af6 192 SUPERFAMILY SSF52317 1 191 1.13E-54 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like VFU_RS03175 8a482189b5f601ecc9b05c7940ad0af6 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 4.24E-13 T 21-04-2016 VFU_RS03175 8a482189b5f601ecc9b05c7940ad0af6 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 4.24E-13 T 21-04-2016 VFU_RS03175 8a482189b5f601ecc9b05c7940ad0af6 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 4.24E-13 T 21-04-2016 VFU_RS03175 8a482189b5f601ecc9b05c7940ad0af6 192 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 192 7.5E-87 T 21-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VFU_RS03175 8a482189b5f601ecc9b05c7940ad0af6 192 Gene3D G3DSA:3.40.50.880 2 191 2.0E-66 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like VFU_RS03175 8a482189b5f601ecc9b05c7940ad0af6 192 PANTHER PTHR11922:SF7 1 191 1.1E-93 T 21-04-2016 VFU_RS06260 f481d9b43d8619208a7fdb434a225311 258 Pfam PF13614 AAA domain 4 181 3.7E-51 T 21-04-2016 IPR025669 AAA domain VFU_RS06260 f481d9b43d8619208a7fdb434a225311 258 PANTHER PTHR13696:SF69 1 258 4.0E-155 T 21-04-2016 VFU_RS06260 f481d9b43d8619208a7fdb434a225311 258 Gene3D G3DSA:3.40.50.300 3 248 3.7E-58 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS06260 f481d9b43d8619208a7fdb434a225311 258 PANTHER PTHR13696 1 258 4.0E-155 T 21-04-2016 VFU_RS06260 f481d9b43d8619208a7fdb434a225311 258 SUPERFAMILY SSF52540 1 252 3.97E-57 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS12265 ce92fe3f610cc30d086fd25e62b0db48 155 SUPERFAMILY SSF88697 5 46 7.46E-9 T 21-04-2016 IPR015947 PUA-like domain VFU_RS12265 ce92fe3f610cc30d086fd25e62b0db48 155 Pfam PF12961 Domain of Unknown Function with PDB structure (DUF3850) 7 81 4.5E-30 T 21-04-2016 VFU_RS12265 ce92fe3f610cc30d086fd25e62b0db48 155 Gene3D G3DSA:3.10.480.10 6 57 4.0E-6 T 21-04-2016 VFU_RS03115 45b916cbb1a92e56f746192bc173b55a 196 Pfam PF04350 Pilus assembly protein, PilO 47 189 1.3E-45 T 21-04-2016 IPR007445 Pilus assembly protein, PilO VFU_RS03115 45b916cbb1a92e56f746192bc173b55a 196 Gene3D G3DSA:3.30.70.60 92 193 4.8E-31 T 21-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 VFU_RS03115 45b916cbb1a92e56f746192bc173b55a 196 PIRSF PIRSF016482 1 196 2.8E-75 T 21-04-2016 IPR007445 Pilus assembly protein, PilO VFU_RS03115 45b916cbb1a92e56f746192bc173b55a 196 PANTHER PTHR39555:SF1 1 196 4.7E-54 T 21-04-2016 VFU_RS03115 45b916cbb1a92e56f746192bc173b55a 196 PANTHER PTHR39555 1 196 4.7E-54 T 21-04-2016 VFU_RS09285 bf047d2b3245378f7eaa10d6a399e9cc 224 PANTHER PTHR42208:SF1 1 224 1.4E-58 T 21-04-2016 VFU_RS09285 bf047d2b3245378f7eaa10d6a399e9cc 224 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 8 211 4.9E-55 T 21-04-2016 VFU_RS09285 bf047d2b3245378f7eaa10d6a399e9cc 224 PANTHER PTHR42208 1 224 1.4E-58 T 21-04-2016 VFU_RS07985 99fabf7f9629dcb304a716b8245afb5a 263 Pfam PF08241 Methyltransferase domain 52 148 2.6E-12 T 21-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 VFU_RS07985 99fabf7f9629dcb304a716b8245afb5a 263 PANTHER PTHR10108 3 205 9.8E-28 T 21-04-2016 VFU_RS07985 99fabf7f9629dcb304a716b8245afb5a 263 SUPERFAMILY SSF53335 6 241 6.72E-33 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS07985 99fabf7f9629dcb304a716b8245afb5a 263 PANTHER PTHR10108:SF919 3 205 9.8E-28 T 21-04-2016 VFU_RS07985 99fabf7f9629dcb304a716b8245afb5a 263 Gene3D G3DSA:3.40.50.150 39 260 2.0E-26 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS11495 f48afe66c31d0215023b13311673e851 269 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 267 8.5E-100 T 21-04-2016 VFU_RS11495 f48afe66c31d0215023b13311673e851 269 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 21-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 VFU_RS11495 f48afe66c31d0215023b13311673e851 269 Gene3D G3DSA:3.60.10.10 1 267 1.1E-83 T 21-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VFU_RS11495 f48afe66c31d0215023b13311673e851 269 PANTHER PTHR22748:SF7 1 267 1.5E-132 T 21-04-2016 VFU_RS11495 f48afe66c31d0215023b13311673e851 269 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 198 214 - T 21-04-2016 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 VFU_RS11495 f48afe66c31d0215023b13311673e851 269 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 260 2.3E-25 T 21-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VFU_RS11495 f48afe66c31d0215023b13311673e851 269 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 267 4.0E-87 T 21-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 VFU_RS11495 f48afe66c31d0215023b13311673e851 269 SUPERFAMILY SSF56219 1 267 6.41E-87 T 21-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VFU_RS11495 f48afe66c31d0215023b13311673e851 269 PANTHER PTHR22748 1 267 1.5E-132 T 21-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 VFU_RS10530 24bed37feff8771253061e29ed075752 511 SUPERFAMILY SSF48557 4 509 2.98E-195 T 21-04-2016 IPR008948 L-Aspartase-like GO:0003824 VFU_RS10530 24bed37feff8771253061e29ed075752 511 Gene3D G3DSA:1.10.275.10 4 197 1.2E-74 T 21-04-2016 IPR024083 Fumarase/histidase, N-terminal VFU_RS10530 24bed37feff8771253061e29ed075752 511 Pfam PF00221 Aromatic amino acid lyase 11 470 5.8E-189 T 21-04-2016 IPR001106 Aromatic amino acid lyase VFU_RS10530 24bed37feff8771253061e29ed075752 511 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 21-04-2016 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 VFU_RS10530 24bed37feff8771253061e29ed075752 511 PANTHER PTHR10362 3 495 1.4E-253 T 21-04-2016 VFU_RS10530 24bed37feff8771253061e29ed075752 511 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 5 506 5.1E-217 T 21-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VFU_RS10530 24bed37feff8771253061e29ed075752 511 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 504 44.833 T 21-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VFU_RS10530 24bed37feff8771253061e29ed075752 511 Gene3D G3DSA:1.20.200.10 198 500 4.5E-130 T 21-04-2016 VFU_RS02055 a5c90b076f9678458404ddb0617e1197 319 Gene3D G3DSA:3.40.50.2300 141 306 1.8E-45 T 21-04-2016 VFU_RS02055 a5c90b076f9678458404ddb0617e1197 319 Gene3D G3DSA:3.40.50.2300 26 140 2.9E-26 T 21-04-2016 VFU_RS02055 a5c90b076f9678458404ddb0617e1197 319 SUPERFAMILY SSF53822 23 307 1.73E-69 T 21-04-2016 IPR028082 Periplasmic binding protein-like I VFU_RS02055 a5c90b076f9678458404ddb0617e1197 319 PANTHER PTHR32196:SF20 5 284 4.1E-144 T 21-04-2016 VFU_RS02055 a5c90b076f9678458404ddb0617e1197 319 PANTHER PTHR32196 5 284 4.1E-144 T 21-04-2016 VFU_RS02055 a5c90b076f9678458404ddb0617e1197 319 Pfam PF13407 Periplasmic binding protein domain 33 277 5.0E-43 T 21-04-2016 IPR025997 Periplasmic binding protein VFU_RS03370 fa2b6ea283a1d2ae93ee95c140b5adcb 58 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 2.5E-21 T 21-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain VFU_RS03370 fa2b6ea283a1d2ae93ee95c140b5adcb 58 SUPERFAMILY SSF55129 1 58 1.83E-23 T 21-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain VFU_RS03370 fa2b6ea283a1d2ae93ee95c140b5adcb 58 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 22.06 T 21-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 VFU_RS03370 fa2b6ea283a1d2ae93ee95c140b5adcb 58 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 9.1E-27 T 21-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 VFU_RS03370 fa2b6ea283a1d2ae93ee95c140b5adcb 58 ProSitePatterns PS00634 Ribosomal protein L30 signature. 22 54 - T 21-04-2016 IPR018038 Ribosomal protein L30, conserved site VFU_RS03370 fa2b6ea283a1d2ae93ee95c140b5adcb 58 Gene3D G3DSA:3.30.1390.20 1 58 4.5E-33 T 21-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain VFU_RS03370 fa2b6ea283a1d2ae93ee95c140b5adcb 58 PIRSF PIRSF002211 1 58 1.0E-28 T 21-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 VFU_RS03370 fa2b6ea283a1d2ae93ee95c140b5adcb 58 PANTHER PTHR15892 1 58 2.5E-30 T 21-04-2016 VFU_RS10360 2470b059734638ed5fb3ee692bb1b652 226 Pfam PF04172 LrgB-like family 6 217 1.4E-72 T 21-04-2016 IPR007300 CidB/LrgB family VFU_RS10360 2470b059734638ed5fb3ee692bb1b652 226 PANTHER PTHR30249 1 217 1.6E-95 T 21-04-2016 VFU_RS10360 2470b059734638ed5fb3ee692bb1b652 226 PANTHER PTHR30249:SF5 1 217 1.6E-95 T 21-04-2016 VFU_RS01915 0966f420b46dfa1e5e9e3ae9529e85d8 649 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 143 597 56.193 T 21-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 VFU_RS01915 0966f420b46dfa1e5e9e3ae9529e85d8 649 Pfam PF13667 ThiC-associated domain 22 104 1.7E-32 T 21-04-2016 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 VFU_RS01915 0966f420b46dfa1e5e9e3ae9529e85d8 649 Pfam PF01964 Radical SAM ThiC family 144 592 3.3E-200 T 21-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 VFU_RS01915 0966f420b46dfa1e5e9e3ae9529e85d8 649 PANTHER PTHR30557 136 166 0.0 T 21-04-2016 VFU_RS01915 0966f420b46dfa1e5e9e3ae9529e85d8 649 PANTHER PTHR30557 194 643 0.0 T 21-04-2016 VFU_RS01915 0966f420b46dfa1e5e9e3ae9529e85d8 649 PANTHER PTHR30557 4 102 0.0 T 21-04-2016 VFU_RS01915 0966f420b46dfa1e5e9e3ae9529e85d8 649 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 143 594 1.6E-218 T 21-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 VFU_RS01915 0966f420b46dfa1e5e9e3ae9529e85d8 649 PANTHER PTHR30557:SF1 136 166 0.0 T 21-04-2016 VFU_RS01915 0966f420b46dfa1e5e9e3ae9529e85d8 649 PANTHER PTHR30557:SF1 194 643 0.0 T 21-04-2016 VFU_RS01915 0966f420b46dfa1e5e9e3ae9529e85d8 649 PANTHER PTHR30557:SF1 4 102 0.0 T 21-04-2016 VFU_RS15000 27fbc52d3f02fc33821ee212f94efe08 271 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 269 48.047 T 21-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 VFU_RS15000 27fbc52d3f02fc33821ee212f94efe08 271 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 2 267 6.0E-113 T 21-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 VFU_RS15000 27fbc52d3f02fc33821ee212f94efe08 271 PIRSF PIRSF000903 1 271 3.7E-116 T 21-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 VFU_RS15000 27fbc52d3f02fc33821ee212f94efe08 271 Gene3D G3DSA:3.60.21.10 4 130 1.9E-53 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like VFU_RS15000 27fbc52d3f02fc33821ee212f94efe08 271 Gene3D G3DSA:3.60.21.10 167 263 1.9E-53 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like VFU_RS15000 27fbc52d3f02fc33821ee212f94efe08 271 PANTHER PTHR24032:SF27 2 266 2.4E-136 T 21-04-2016 VFU_RS15000 27fbc52d3f02fc33821ee212f94efe08 271 PANTHER PTHR24032 2 266 2.4E-136 T 21-04-2016 VFU_RS15000 27fbc52d3f02fc33821ee212f94efe08 271 Pfam PF00149 Calcineurin-like phosphoesterase 5 159 7.1E-14 T 21-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 VFU_RS15000 27fbc52d3f02fc33821ee212f94efe08 271 SUPERFAMILY SSF56300 4 247 3.3E-56 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like VFU_RS03355 5e388c5e622ddca7885951b03c218963 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 21-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS03355 5e388c5e622ddca7885951b03c218963 177 Pfam PF00347 Ribosomal protein L6 11 82 7.4E-21 T 21-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 VFU_RS03355 5e388c5e622ddca7885951b03c218963 177 Pfam PF00347 Ribosomal protein L6 91 164 5.3E-18 T 21-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 VFU_RS03355 5e388c5e622ddca7885951b03c218963 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 1.2E-73 T 21-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VFU_RS03355 5e388c5e622ddca7885951b03c218963 177 PANTHER PTHR11655:SF14 1 176 8.5E-88 T 21-04-2016 VFU_RS03355 5e388c5e622ddca7885951b03c218963 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.296 T 21-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VFU_RS03355 5e388c5e622ddca7885951b03c218963 177 Gene3D G3DSA:3.90.930.12 83 177 1.3E-39 T 21-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 VFU_RS03355 5e388c5e622ddca7885951b03c218963 177 SUPERFAMILY SSF56053 83 177 2.22E-35 T 21-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 VFU_RS03355 5e388c5e622ddca7885951b03c218963 177 PIRSF PIRSF002162 1 177 6.8E-44 T 21-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 VFU_RS03355 5e388c5e622ddca7885951b03c218963 177 Gene3D G3DSA:3.90.930.12 2 82 6.7E-30 T 21-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 VFU_RS03355 5e388c5e622ddca7885951b03c218963 177 SUPERFAMILY SSF56053 1 82 1.96E-25 T 21-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 VFU_RS03355 5e388c5e622ddca7885951b03c218963 177 PANTHER PTHR11655 1 176 8.5E-88 T 21-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 VFU_RS03355 5e388c5e622ddca7885951b03c218963 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 2.4E-33 T 21-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VFU_RS03355 5e388c5e622ddca7885951b03c218963 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 2.4E-33 T 21-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VFU_RS03355 5e388c5e622ddca7885951b03c218963 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 2.4E-33 T 21-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VFU_RS12650 96419af76ee8d62bff832378cc89130b 528 Pfam PF00999 Sodium/hydrogen exchanger family 4 347 1.8E-35 T 21-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VFU_RS12650 96419af76ee8d62bff832378cc89130b 528 PANTHER PTHR16254 3 527 4.8E-159 T 21-04-2016 VFU_RS12650 96419af76ee8d62bff832378cc89130b 528 Gene3D G3DSA:3.40.50.720 381 526 4.5E-49 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS12650 96419af76ee8d62bff832378cc89130b 528 SUPERFAMILY SSF51735 387 518 2.7E-15 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS12650 96419af76ee8d62bff832378cc89130b 528 Pfam PF02254 TrkA-N domain 388 504 1.0E-18 T 21-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VFU_RS12650 96419af76ee8d62bff832378cc89130b 528 PANTHER PTHR16254:SF14 3 527 4.8E-159 T 21-04-2016 VFU_RS09635 c7dc15bcfe05b65a35358f58b6cfff77 337 Pfam PF00682 HMGL-like 6 262 2.0E-73 T 21-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 VFU_RS09635 c7dc15bcfe05b65a35358f58b6cfff77 337 SUPERFAMILY SSF89000 288 336 6.28E-19 T 21-04-2016 VFU_RS09635 c7dc15bcfe05b65a35358f58b6cfff77 337 Gene3D G3DSA:1.10.8.60 275 337 5.0E-34 T 21-04-2016 VFU_RS09635 c7dc15bcfe05b65a35358f58b6cfff77 337 TIGRFAM TIGR03217 4OH_2_O_val_ald: 4-hydroxy-2-oxovalerate aldolase 5 336 5.5E-178 T 21-04-2016 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 VFU_RS09635 c7dc15bcfe05b65a35358f58b6cfff77 337 Hamap MF_01656 4-hydroxy-2-oxovalerate aldolase [mhpE]. 1 337 221.015 T 21-04-2016 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 VFU_RS09635 c7dc15bcfe05b65a35358f58b6cfff77 337 Gene3D G3DSA:3.20.20.70 4 263 6.8E-57 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS09635 c7dc15bcfe05b65a35358f58b6cfff77 337 PANTHER PTHR10277:SF3 1 337 7.1E-120 T 21-04-2016 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 VFU_RS09635 c7dc15bcfe05b65a35358f58b6cfff77 337 PANTHER PTHR10277 1 337 7.1E-120 T 21-04-2016 VFU_RS09635 c7dc15bcfe05b65a35358f58b6cfff77 337 SUPERFAMILY SSF51569 4 276 7.14E-66 T 21-04-2016 VFU_RS09635 c7dc15bcfe05b65a35358f58b6cfff77 337 Pfam PF07836 DmpG-like communication domain 274 334 4.4E-31 T 21-04-2016 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 VFU_RS09635 c7dc15bcfe05b65a35358f58b6cfff77 337 ProDom PD005364 ALDOLASE 4-HYDROXY-2-OXOVALERATE LYASE PYRUVATE 4.1.3.- PLASMID HMG-COA LYASE-LIKE TRANSFERASE HOA 272 336 1.0E-25 T 21-04-2016 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 VFU_RS04420 3a4f1a228537eaa40fcabe2ed5ad66a2 112 PIRSF PIRSF039144 1 112 1.8E-55 T 21-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VFU_RS04420 3a4f1a228537eaa40fcabe2ed5ad66a2 112 PRINTS PR00340 P-II protein signature 83 103 1.7E-40 T 21-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VFU_RS04420 3a4f1a228537eaa40fcabe2ed5ad66a2 112 PRINTS PR00340 P-II protein signature 52 75 1.7E-40 T 21-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VFU_RS04420 3a4f1a228537eaa40fcabe2ed5ad66a2 112 PRINTS PR00340 P-II protein signature 23 41 1.7E-40 T 21-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VFU_RS04420 3a4f1a228537eaa40fcabe2ed5ad66a2 112 PRINTS PR00340 P-II protein signature 2 17 1.7E-40 T 21-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VFU_RS04420 3a4f1a228537eaa40fcabe2ed5ad66a2 112 SUPERFAMILY SSF54913 1 112 3.81E-45 T 21-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta VFU_RS04420 3a4f1a228537eaa40fcabe2ed5ad66a2 112 PANTHER PTHR30115 1 112 1.6E-82 T 21-04-2016 VFU_RS04420 3a4f1a228537eaa40fcabe2ed5ad66a2 112 SMART SM00938 4 105 6.4E-68 T 21-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VFU_RS04420 3a4f1a228537eaa40fcabe2ed5ad66a2 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 21-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 VFU_RS04420 3a4f1a228537eaa40fcabe2ed5ad66a2 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 2.9E-43 T 21-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VFU_RS04420 3a4f1a228537eaa40fcabe2ed5ad66a2 112 PANTHER PTHR30115:SF15 1 112 1.6E-82 T 21-04-2016 VFU_RS04420 3a4f1a228537eaa40fcabe2ed5ad66a2 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 21-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 VFU_RS04420 3a4f1a228537eaa40fcabe2ed5ad66a2 112 Gene3D G3DSA:3.30.70.120 1 112 1.3E-50 T 21-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VFU_RS14040 29dd19a779ab7829f2c7a0aac1504e61 427 PANTHER PTHR10314 25 426 1.1E-134 T 21-04-2016 VFU_RS14040 29dd19a779ab7829f2c7a0aac1504e61 427 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 91 366 7.4E-22 T 21-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VFU_RS14040 29dd19a779ab7829f2c7a0aac1504e61 427 SUPERFAMILY SSF53686 1 425 1.44E-129 T 21-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VFU_RS14040 29dd19a779ab7829f2c7a0aac1504e61 427 Pfam PF14821 Threonine synthase N terminus 8 78 7.4E-9 T 21-04-2016 IPR029144 Threonine synthase, N-terminal VFU_RS14040 29dd19a779ab7829f2c7a0aac1504e61 427 PANTHER PTHR10314:SF1 25 426 1.1E-134 T 21-04-2016 VFU_RS14040 29dd19a779ab7829f2c7a0aac1504e61 427 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 95 109 - T 21-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 VFU_RS14040 29dd19a779ab7829f2c7a0aac1504e61 427 TIGRFAM TIGR00260 thrC: threonine synthase 51 391 6.7E-113 T 21-04-2016 IPR004450 Threonine synthase-like VFU_RS14040 29dd19a779ab7829f2c7a0aac1504e61 427 Gene3D G3DSA:3.40.50.1100 193 399 1.2E-66 T 21-04-2016 VFU_RS14040 29dd19a779ab7829f2c7a0aac1504e61 427 Gene3D G3DSA:3.40.50.1100 104 192 5.3E-13 T 21-04-2016 VFU_RS14040 29dd19a779ab7829f2c7a0aac1504e61 427 Gene3D G3DSA:3.90.1380.10 1 82 2.6E-18 T 21-04-2016 IPR029144 Threonine synthase, N-terminal VFU_RS14180 65ac1bba228a5eb5e0a2458ea08802b4 379 SMART SM01097 3 133 3.7E-93 T 21-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VFU_RS14180 65ac1bba228a5eb5e0a2458ea08802b4 379 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.1E-5 T 21-04-2016 VFU_RS14180 65ac1bba228a5eb5e0a2458ea08802b4 379 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.1E-5 T 21-04-2016 VFU_RS14180 65ac1bba228a5eb5e0a2458ea08802b4 379 PRINTS PR00097 Anthranilate synthase component II signature 236 245 1.1E-5 T 21-04-2016 VFU_RS14180 65ac1bba228a5eb5e0a2458ea08802b4 379 SUPERFAMILY SSF52317 153 377 1.32E-64 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like VFU_RS14180 65ac1bba228a5eb5e0a2458ea08802b4 379 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 48.875 T 21-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VFU_RS14180 65ac1bba228a5eb5e0a2458ea08802b4 379 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 375 6.6E-151 T 21-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VFU_RS14180 65ac1bba228a5eb5e0a2458ea08802b4 379 SUPERFAMILY SSF52021 4 142 1.05E-57 T 21-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VFU_RS14180 65ac1bba228a5eb5e0a2458ea08802b4 379 Gene3D G3DSA:3.40.50.880 154 378 2.7E-85 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like VFU_RS14180 65ac1bba228a5eb5e0a2458ea08802b4 379 PANTHER PTHR11405 189 379 1.3E-255 T 21-04-2016 VFU_RS14180 65ac1bba228a5eb5e0a2458ea08802b4 379 PANTHER PTHR11405 3 173 1.3E-255 T 21-04-2016 VFU_RS14180 65ac1bba228a5eb5e0a2458ea08802b4 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 3.5E-11 T 21-04-2016 VFU_RS14180 65ac1bba228a5eb5e0a2458ea08802b4 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 3.5E-11 T 21-04-2016 VFU_RS14180 65ac1bba228a5eb5e0a2458ea08802b4 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 3.5E-11 T 21-04-2016 VFU_RS14180 65ac1bba228a5eb5e0a2458ea08802b4 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 5.5E-40 T 21-04-2016 VFU_RS14180 65ac1bba228a5eb5e0a2458ea08802b4 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 5.5E-40 T 21-04-2016 VFU_RS14180 65ac1bba228a5eb5e0a2458ea08802b4 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 5.5E-40 T 21-04-2016 VFU_RS14180 65ac1bba228a5eb5e0a2458ea08802b4 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 5.5E-40 T 21-04-2016 VFU_RS14180 65ac1bba228a5eb5e0a2458ea08802b4 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 5.5E-40 T 21-04-2016 VFU_RS14180 65ac1bba228a5eb5e0a2458ea08802b4 379 Gene3D G3DSA:3.50.30.20 4 145 3.6E-63 T 21-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VFU_RS14180 65ac1bba228a5eb5e0a2458ea08802b4 379 Pfam PF00117 Glutamine amidotransferase class-I 197 372 1.4E-48 T 21-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 VFU_RS14180 65ac1bba228a5eb5e0a2458ea08802b4 379 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 1.9E-53 T 21-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VFU_RS03205 12d4a18fe8149a9f20436685c65ddcec 289 PANTHER PTHR10285:SF72 1 284 3.9E-153 T 21-04-2016 VFU_RS03205 12d4a18fe8149a9f20436685c65ddcec 289 SUPERFAMILY SSF52540 4 286 4.99E-47 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS03205 12d4a18fe8149a9f20436685c65ddcec 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 8.1E-28 T 21-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 VFU_RS03205 12d4a18fe8149a9f20436685c65ddcec 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 8.1E-28 T 21-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 VFU_RS03205 12d4a18fe8149a9f20436685c65ddcec 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 8.1E-28 T 21-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 VFU_RS03205 12d4a18fe8149a9f20436685c65ddcec 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 8.1E-28 T 21-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 VFU_RS03205 12d4a18fe8149a9f20436685c65ddcec 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 2.8E-70 T 21-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 VFU_RS03205 12d4a18fe8149a9f20436685c65ddcec 289 PANTHER PTHR10285 1 284 3.9E-153 T 21-04-2016 VFU_RS03205 12d4a18fe8149a9f20436685c65ddcec 289 Gene3D G3DSA:3.40.50.300 1 288 1.3E-125 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS03610 bf1c33dea35304cbe05b30448bacc42b 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 2.8E-27 T 21-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 VFU_RS03610 bf1c33dea35304cbe05b30448bacc42b 95 PANTHER PTHR33231 1 95 1.2E-39 T 21-04-2016 VFU_RS03610 bf1c33dea35304cbe05b30448bacc42b 95 Gene3D G3DSA:3.30.160.100 1 95 7.1E-37 T 21-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 VFU_RS03610 bf1c33dea35304cbe05b30448bacc42b 95 SUPERFAMILY SSF69754 1 95 4.45E-33 T 21-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 VFU_RS03610 bf1c33dea35304cbe05b30448bacc42b 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 3.4E-32 T 21-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 VFU_RS13345 59c832a549adb9a61733d1461c77b7f4 774 Pfam PF13954 PapC N-terminal domain 1 118 3.7E-19 T 21-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 VFU_RS13345 59c832a549adb9a61733d1461c77b7f4 774 Pfam PF00577 Outer membrane usher protein 139 689 3.7E-117 T 21-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 VFU_RS13345 59c832a549adb9a61733d1461c77b7f4 774 PANTHER PTHR30451 1 761 2.3E-140 T 21-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 VFU_RS13345 59c832a549adb9a61733d1461c77b7f4 774 SUPERFAMILY SSF141729 2 109 1.57E-12 T 21-04-2016 VFU_RS13345 59c832a549adb9a61733d1461c77b7f4 774 Pfam PF13953 PapC C-terminal domain 707 761 2.4E-12 T 21-04-2016 IPR025949 PapC-like, C-terminal domain VFU_RS04935 379abffc1ff84b532f0e4b4d323074bb 324 Pfam PF00849 RNA pseudouridylate synthase 92 241 3.2E-30 T 21-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS04935 379abffc1ff84b532f0e4b4d323074bb 324 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 21-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS04935 379abffc1ff84b532f0e4b4d323074bb 324 PANTHER PTHR11079:SF73 6 323 8.7E-154 T 21-04-2016 VFU_RS04935 379abffc1ff84b532f0e4b4d323074bb 324 Gene3D G3DSA:3.10.290.10 18 69 8.6E-13 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VFU_RS04935 379abffc1ff84b532f0e4b4d323074bb 324 Pfam PF01479 S4 domain 18 63 6.3E-8 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VFU_RS04935 379abffc1ff84b532f0e4b4d323074bb 324 SUPERFAMILY SSF55174 17 69 4.88E-11 T 21-04-2016 VFU_RS04935 379abffc1ff84b532f0e4b4d323074bb 324 SMART SM00363 18 83 4.4E-8 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VFU_RS04935 379abffc1ff84b532f0e4b4d323074bb 324 SUPERFAMILY SSF55120 77 316 5.96E-80 T 21-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS04935 379abffc1ff84b532f0e4b4d323074bb 324 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 14 313 7.3E-106 T 21-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS04935 379abffc1ff84b532f0e4b4d323074bb 324 PANTHER PTHR11079 6 323 8.7E-154 T 21-04-2016 VFU_RS02145 b5b633e92efc2e7b2958cbed0f8529f0 253 PANTHER PTHR10060:SF21 1 253 1.8E-150 T 21-04-2016 VFU_RS02145 b5b633e92efc2e7b2958cbed0f8529f0 253 SUPERFAMILY SSF51556 1 253 2.16E-77 T 21-04-2016 IPR032466 Metal-dependent hydrolase VFU_RS02145 b5b633e92efc2e7b2958cbed0f8529f0 253 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 1 252 1.3E-69 T 21-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 VFU_RS02145 b5b633e92efc2e7b2958cbed0f8529f0 253 PANTHER PTHR10060 1 253 1.8E-150 T 21-04-2016 IPR001130 TatD family GO:0016788 VFU_RS02145 b5b633e92efc2e7b2958cbed0f8529f0 253 Pfam PF01026 TatD related DNase 2 252 1.2E-63 T 21-04-2016 IPR001130 TatD family GO:0016788 VFU_RS02145 b5b633e92efc2e7b2958cbed0f8529f0 253 Gene3D G3DSA:3.20.20.140 1 253 5.9E-76 T 21-04-2016 VFU_RS02145 b5b633e92efc2e7b2958cbed0f8529f0 253 PIRSF PIRSF005902 1 253 1.5E-67 T 21-04-2016 IPR001130 TatD family GO:0016788 VFU_RS09905 c05e09d01b1878bf5e780e5985a1cf06 285 SUPERFAMILY SSF82861 21 104 2.88E-14 T 21-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 VFU_RS09905 c05e09d01b1878bf5e780e5985a1cf06 285 Pfam PF00924 Mechanosensitive ion channel 63 259 3.2E-51 T 21-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VFU_RS09905 c05e09d01b1878bf5e780e5985a1cf06 285 SUPERFAMILY SSF50182 105 171 5.23E-14 T 21-04-2016 IPR010920 LSM domain VFU_RS09905 c05e09d01b1878bf5e780e5985a1cf06 285 PANTHER PTHR30221:SF7 11 277 1.2E-68 T 21-04-2016 VFU_RS09905 c05e09d01b1878bf5e780e5985a1cf06 285 PANTHER PTHR30221 11 277 1.2E-68 T 21-04-2016 VFU_RS09905 c05e09d01b1878bf5e780e5985a1cf06 285 Gene3D G3DSA:3.30.70.100 174 257 3.0E-21 T 21-04-2016 VFU_RS09905 c05e09d01b1878bf5e780e5985a1cf06 285 SUPERFAMILY SSF82689 172 269 1.31E-26 T 21-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 VFU_RS09905 c05e09d01b1878bf5e780e5985a1cf06 285 Gene3D G3DSA:2.30.30.60 121 170 2.6E-11 T 21-04-2016 VFU_RS04460 96a767a486d624ac82f844f51cecd37f 291 PANTHER PTHR12862:SF5 4 277 5.6E-79 T 21-04-2016 VFU_RS04460 96a767a486d624ac82f844f51cecd37f 291 Gene3D G3DSA:3.30.420.40 4 79 8.0E-4 T 21-04-2016 VFU_RS04460 96a767a486d624ac82f844f51cecd37f 291 SUPERFAMILY SSF53067 114 283 2.76E-44 T 21-04-2016 VFU_RS04460 96a767a486d624ac82f844f51cecd37f 291 SUPERFAMILY SSF53067 3 112 4.29E-23 T 21-04-2016 VFU_RS04460 96a767a486d624ac82f844f51cecd37f 291 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 7 283 4.1E-41 T 21-04-2016 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type VFU_RS04460 96a767a486d624ac82f844f51cecd37f 291 PANTHER PTHR12862 4 277 5.6E-79 T 21-04-2016 VFU_RS03300 fdc5354e4f4e1e27839333c3d167d966 274 PANTHER PTHR13691 1 274 4.7E-147 T 21-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS03300 fdc5354e4f4e1e27839333c3d167d966 274 SMART SM01383 42 118 3.0E-47 T 21-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS03300 fdc5354e4f4e1e27839333c3d167d966 274 SUPERFAMILY SSF50104 127 272 2.41E-61 T 21-04-2016 IPR008991 Translation protein SH3-like domain VFU_RS03300 fdc5354e4f4e1e27839333c3d167d966 274 SMART SM01382 124 252 3.5E-91 T 21-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 VFU_RS03300 fdc5354e4f4e1e27839333c3d167d966 274 Gene3D G3DSA:2.40.50.140 1 114 3.5E-50 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS03300 fdc5354e4f4e1e27839333c3d167d966 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 5.4E-56 T 21-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 VFU_RS03300 fdc5354e4f4e1e27839333c3d167d966 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 21-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 VFU_RS03300 fdc5354e4f4e1e27839333c3d167d966 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 46.963 T 21-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 VFU_RS03300 fdc5354e4f4e1e27839333c3d167d966 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 3.1E-130 T 21-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 VFU_RS03300 fdc5354e4f4e1e27839333c3d167d966 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 1.2E-34 T 21-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS03300 fdc5354e4f4e1e27839333c3d167d966 274 Gene3D G3DSA:2.30.30.30 119 195 9.5E-33 T 21-04-2016 IPR014722 Ribosomal protein L2 domain 2 VFU_RS03300 fdc5354e4f4e1e27839333c3d167d966 274 SUPERFAMILY SSF50249 2 125 1.13E-49 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS03300 fdc5354e4f4e1e27839333c3d167d966 274 PIRSF PIRSF002158 13 274 2.4E-100 T 21-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS03300 fdc5354e4f4e1e27839333c3d167d966 274 Gene3D G3DSA:4.10.950.10 196 273 2.0E-35 T 21-04-2016 IPR014726 Ribosomal protein L2, domain 3 VFU_RS04655 ff33f817bc097c4696b89bf6a0c2b5cd 444 PANTHER PTHR11206:SF132 1 430 1.1E-131 T 21-04-2016 VFU_RS04655 ff33f817bc097c4696b89bf6a0c2b5cd 444 PIRSF PIRSF006603 1 435 3.3E-68 T 21-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VFU_RS04655 ff33f817bc097c4696b89bf6a0c2b5cd 444 Pfam PF01554 MatE 240 399 4.1E-14 T 21-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VFU_RS04655 ff33f817bc097c4696b89bf6a0c2b5cd 444 Pfam PF01554 MatE 15 176 8.4E-22 T 21-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VFU_RS04655 ff33f817bc097c4696b89bf6a0c2b5cd 444 TIGRFAM TIGR00797 matE: MATE efflux family protein 15 410 2.8E-52 T 21-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VFU_RS04655 ff33f817bc097c4696b89bf6a0c2b5cd 444 PANTHER PTHR11206 1 430 1.1E-131 T 21-04-2016 VFU_RS09870 a810eed069dee460f2eb6c5dc61c2446 724 Gene3D G3DSA:1.10.420.10 310 409 9.5E-47 T 21-04-2016 VFU_RS09870 a810eed069dee460f2eb6c5dc61c2446 724 Gene3D G3DSA:1.10.420.10 252 274 9.5E-47 T 21-04-2016 VFU_RS09870 a810eed069dee460f2eb6c5dc61c2446 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 67 92 1.7E-53 T 21-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 VFU_RS09870 a810eed069dee460f2eb6c5dc61c2446 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 26 48 1.7E-53 T 21-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 VFU_RS09870 a810eed069dee460f2eb6c5dc61c2446 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 478 504 1.7E-53 T 21-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 VFU_RS09870 a810eed069dee460f2eb6c5dc61c2446 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 52 65 1.7E-53 T 21-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 VFU_RS09870 a810eed069dee460f2eb6c5dc61c2446 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 267 290 1.7E-53 T 21-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 VFU_RS09870 a810eed069dee460f2eb6c5dc61c2446 724 PANTHER PTHR30555 1 724 0.0 T 21-04-2016 VFU_RS09870 a810eed069dee460f2eb6c5dc61c2446 724 SUPERFAMILY SSF48113 432 722 4.42E-112 T 21-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 VFU_RS09870 a810eed069dee460f2eb6c5dc61c2446 724 Gene3D G3DSA:1.10.520.10 239 251 1.7E-75 T 21-04-2016 VFU_RS09870 a810eed069dee460f2eb6c5dc61c2446 724 Gene3D G3DSA:1.10.520.10 702 723 1.4E-55 T 21-04-2016 VFU_RS09870 a810eed069dee460f2eb6c5dc61c2446 724 Gene3D G3DSA:1.10.520.10 47 201 1.7E-75 T 21-04-2016 VFU_RS09870 a810eed069dee460f2eb6c5dc61c2446 724 Gene3D G3DSA:1.10.520.10 434 578 1.4E-55 T 21-04-2016 VFU_RS09870 a810eed069dee460f2eb6c5dc61c2446 724 PANTHER PTHR30555:SF0 1 724 0.0 T 21-04-2016 VFU_RS09870 a810eed069dee460f2eb6c5dc61c2446 724 PRINTS PR00458 Haem peroxidase superfamily signature 318 333 2.7E-18 T 21-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VFU_RS09870 a810eed069dee460f2eb6c5dc61c2446 724 PRINTS PR00458 Haem peroxidase superfamily signature 150 167 2.7E-18 T 21-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VFU_RS09870 a810eed069dee460f2eb6c5dc61c2446 724 PRINTS PR00458 Haem peroxidase superfamily signature 259 274 2.7E-18 T 21-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VFU_RS09870 a810eed069dee460f2eb6c5dc61c2446 724 PRINTS PR00458 Haem peroxidase superfamily signature 168 180 2.7E-18 T 21-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VFU_RS09870 a810eed069dee460f2eb6c5dc61c2446 724 PRINTS PR00458 Haem peroxidase superfamily signature 90 104 2.7E-18 T 21-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VFU_RS09870 a810eed069dee460f2eb6c5dc61c2446 724 Gene3D G3DSA:1.10.420.10 579 699 1.8E-45 T 21-04-2016 VFU_RS09870 a810eed069dee460f2eb6c5dc61c2446 724 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 11 723 0.0 T 21-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 VFU_RS09870 a810eed069dee460f2eb6c5dc61c2446 724 SUPERFAMILY SSF48113 18 431 2.5E-152 T 21-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 VFU_RS09870 a810eed069dee460f2eb6c5dc61c2446 724 Hamap MF_01961 Catalase-peroxidase [katG]. 7 724 39.797 T 21-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 VFU_RS09870 a810eed069dee460f2eb6c5dc61c2446 724 ProSitePatterns PS00436 Peroxidases active site signature. 90 101 - T 21-04-2016 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 VFU_RS09870 a810eed069dee460f2eb6c5dc61c2446 724 Pfam PF00141 Peroxidase 69 397 3.8E-51 T 21-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VFU_RS09870 a810eed069dee460f2eb6c5dc61c2446 724 Pfam PF00141 Peroxidase 406 698 1.3E-36 T 21-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VFU_RS05080 a3f4b8119f6479ad01845489d87bc100 334 PANTHER PTHR30040:SF3 1 334 1.1E-177 T 21-04-2016 VFU_RS05080 a3f4b8119f6479ad01845489d87bc100 334 SUPERFAMILY SSF143631 23 332 7.85E-103 T 21-04-2016 IPR003374 ApbE-like domain VFU_RS05080 a3f4b8119f6479ad01845489d87bc100 334 Pfam PF02424 ApbE family 31 309 5.3E-85 T 21-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 VFU_RS05080 a3f4b8119f6479ad01845489d87bc100 334 PANTHER PTHR30040 1 334 1.1E-177 T 21-04-2016 VFU_RS05080 a3f4b8119f6479ad01845489d87bc100 334 PIRSF PIRSF006268 1 333 1.9E-93 T 21-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 VFU_RS13735 15ed5e1c4b1c76eb307c915cf7f899f2 269 PANTHER PTHR10953:SF159 201 266 1.5E-141 T 21-04-2016 VFU_RS13735 15ed5e1c4b1c76eb307c915cf7f899f2 269 PANTHER PTHR10953:SF159 13 168 1.5E-141 T 21-04-2016 VFU_RS13735 15ed5e1c4b1c76eb307c915cf7f899f2 269 SUPERFAMILY SSF69572 9 267 6.54E-64 T 21-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VFU_RS13735 15ed5e1c4b1c76eb307c915cf7f899f2 269 Pfam PF00899 ThiF family 23 208 2.5E-38 T 21-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VFU_RS13735 15ed5e1c4b1c76eb307c915cf7f899f2 269 PANTHER PTHR10953 201 266 1.5E-141 T 21-04-2016 VFU_RS13735 15ed5e1c4b1c76eb307c915cf7f899f2 269 PANTHER PTHR10953 13 168 1.5E-141 T 21-04-2016 VFU_RS13735 15ed5e1c4b1c76eb307c915cf7f899f2 269 Gene3D G3DSA:3.40.50.720 5 266 2.4E-55 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS04165 7238681184bb9682ed9fa7778cdeae93 530 Pfam PF01471 Putative peptidoglycan binding domain 459 515 8.6E-8 T 21-04-2016 IPR002477 Peptidoglycan binding-like VFU_RS04165 7238681184bb9682ed9fa7778cdeae93 530 SMART SM00382 42 195 1.0E-8 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS04165 7238681184bb9682ed9fa7778cdeae93 530 PANTHER PTHR35894:SF2 2 528 1.6E-228 T 21-04-2016 VFU_RS04165 7238681184bb9682ed9fa7778cdeae93 530 PANTHER PTHR35894 2 528 1.6E-228 T 21-04-2016 VFU_RS04165 7238681184bb9682ed9fa7778cdeae93 530 SUPERFAMILY SSF52540 10 263 8.33E-34 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS04165 7238681184bb9682ed9fa7778cdeae93 530 Pfam PF13401 AAA domain 42 168 2.3E-21 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS04165 7238681184bb9682ed9fa7778cdeae93 530 Gene3D G3DSA:3.40.50.300 27 183 9.1E-22 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS04165 7238681184bb9682ed9fa7778cdeae93 530 SUPERFAMILY SSF47090 449 522 2.43E-11 T 21-04-2016 IPR002477 Peptidoglycan binding-like VFU_RS04165 7238681184bb9682ed9fa7778cdeae93 530 Gene3D G3DSA:1.10.101.10 451 521 1.2E-12 T 21-04-2016 IPR002477 Peptidoglycan binding-like VFU_RS02205 78f8829af3d897cdea4bcf8aea6e226e 242 SUPERFAMILY SSF69618 1 241 1.83E-52 T 21-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VFU_RS02205 78f8829af3d897cdea4bcf8aea6e226e 242 Gene3D G3DSA:3.40.50.10090 30 142 2.9E-14 T 21-04-2016 VFU_RS02205 78f8829af3d897cdea4bcf8aea6e226e 242 PANTHER PTHR38042:SF1 1 242 4.8E-70 T 21-04-2016 VFU_RS02205 78f8829af3d897cdea4bcf8aea6e226e 242 PANTHER PTHR38042 1 242 4.8E-70 T 21-04-2016 VFU_RS02205 78f8829af3d897cdea4bcf8aea6e226e 242 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 237 1.3E-33 T 21-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VFU_RS02205 78f8829af3d897cdea4bcf8aea6e226e 242 Gene3D G3DSA:3.40.50.10090 143 241 2.4E-7 T 21-04-2016 VFU_RS12540 3bf41bad359c9b059a6acfbe4d835cc6 199 PIRSF PIRSF005784 3 188 9.9E-87 T 21-04-2016 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 VFU_RS12540 3bf41bad359c9b059a6acfbe4d835cc6 199 PANTHER PTHR11938:SF64 1 183 4.9E-92 T 21-04-2016 VFU_RS12540 3bf41bad359c9b059a6acfbe4d835cc6 199 Hamap MF_00463 Electron transport complex subunit RsxB [rsxB]. 4 182 42.768 T 21-04-2016 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 VFU_RS12540 3bf41bad359c9b059a6acfbe4d835cc6 199 PANTHER PTHR11938 1 183 4.9E-92 T 21-04-2016 VFU_RS12540 3bf41bad359c9b059a6acfbe4d835cc6 199 Pfam PF14697 4Fe-4S dicluster domain 107 161 6.4E-18 T 21-04-2016 VFU_RS12540 3bf41bad359c9b059a6acfbe4d835cc6 199 Pfam PF04060 Putative Fe-S cluster 44 75 9.1E-15 T 21-04-2016 IPR007202 4Fe-4S domain GO:0051536 VFU_RS12540 3bf41bad359c9b059a6acfbe4d835cc6 199 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 1 187 1.9E-87 T 21-04-2016 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 VFU_RS12540 3bf41bad359c9b059a6acfbe4d835cc6 199 Gene3D G3DSA:3.30.70.20 120 176 2.8E-17 T 21-04-2016 VFU_RS12540 3bf41bad359c9b059a6acfbe4d835cc6 199 SUPERFAMILY SSF54862 37 173 1.13E-31 T 21-04-2016 VFU_RS12540 3bf41bad359c9b059a6acfbe4d835cc6 199 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 144 155 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VFU_RS12540 3bf41bad359c9b059a6acfbe4d835cc6 199 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 114 125 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VFU_RS12540 3bf41bad359c9b059a6acfbe4d835cc6 199 Gene3D G3DSA:1.10.1060.10 47 119 2.5E-5 T 21-04-2016 VFU_RS03560 1cff53149da4d81097f592df95fab1ff 207 SUPERFAMILY SSF52507 6 202 3.01E-56 T 21-04-2016 IPR003382 Flavoprotein GO:0003824 VFU_RS03560 1cff53149da4d81097f592df95fab1ff 207 PANTHER PTHR30108 78 206 1.0E-81 T 21-04-2016 VFU_RS03560 1cff53149da4d81097f592df95fab1ff 207 PANTHER PTHR30108 1 61 1.0E-81 T 21-04-2016 VFU_RS03560 1cff53149da4d81097f592df95fab1ff 207 Gene3D G3DSA:3.40.50.1950 7 205 4.2E-74 T 21-04-2016 IPR003382 Flavoprotein GO:0003824 VFU_RS03560 1cff53149da4d81097f592df95fab1ff 207 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 8 201 7.1E-56 T 21-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 VFU_RS03560 1cff53149da4d81097f592df95fab1ff 207 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 6 203 34.522 T 21-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 VFU_RS03560 1cff53149da4d81097f592df95fab1ff 207 PANTHER PTHR30108:SF2 78 206 1.0E-81 T 21-04-2016 VFU_RS03560 1cff53149da4d81097f592df95fab1ff 207 PANTHER PTHR30108:SF2 1 61 1.0E-81 T 21-04-2016 VFU_RS03560 1cff53149da4d81097f592df95fab1ff 207 Pfam PF02441 Flavoprotein 7 144 2.1E-22 T 21-04-2016 IPR003382 Flavoprotein GO:0003824 VFU_RS10400 b3eed5704d00e8630b0ef3012c4c9635 215 PANTHER PTHR10259:SF16 1 214 1.8E-98 T 21-04-2016 VFU_RS10400 b3eed5704d00e8630b0ef3012c4c9635 215 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 2 215 36.34 T 21-04-2016 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67 VFU_RS10400 b3eed5704d00e8630b0ef3012c4c9635 215 Gene3D G3DSA:3.40.50.150 17 214 1.0E-58 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS10400 b3eed5704d00e8630b0ef3012c4c9635 215 PANTHER PTHR10259 1 214 1.8E-98 T 21-04-2016 VFU_RS10400 b3eed5704d00e8630b0ef3012c4c9635 215 PIRSF PIRSF023956 1 215 2.0E-75 T 21-04-2016 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67 VFU_RS10400 b3eed5704d00e8630b0ef3012c4c9635 215 SUPERFAMILY SSF53335 2 213 1.26E-55 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS10400 b3eed5704d00e8630b0ef3012c4c9635 215 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 5 214 7.0E-80 T 21-04-2016 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 VFU_RS10400 b3eed5704d00e8630b0ef3012c4c9635 215 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 3 214 6.8E-75 T 21-04-2016 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67 VFU_RS02995 b576bbac51c6f5b26dca99c6465a0e52 340 TIGRFAM TIGR00238 TIGR00238: KamA family protein 13 328 6.1E-123 T 21-04-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase VFU_RS02995 b576bbac51c6f5b26dca99c6465a0e52 340 Gene3D G3DSA:3.20.20.70 105 313 5.2E-13 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS02995 b576bbac51c6f5b26dca99c6465a0e52 340 Pfam PF04055 Radical SAM superfamily 117 235 9.7E-10 T 21-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VFU_RS02995 b576bbac51c6f5b26dca99c6465a0e52 340 Pfam PF13353 4Fe-4S single cluster domain 115 182 6.6E-7 T 21-04-2016 VFU_RS02995 b576bbac51c6f5b26dca99c6465a0e52 340 SUPERFAMILY SSF102114 102 324 2.88E-24 T 21-04-2016 VFU_RS02995 b576bbac51c6f5b26dca99c6465a0e52 340 PANTHER PTHR30538:SF1 13 337 4.1E-129 T 21-04-2016 VFU_RS02995 b576bbac51c6f5b26dca99c6465a0e52 340 PANTHER PTHR30538 13 337 4.1E-129 T 21-04-2016 VFU_RS02995 b576bbac51c6f5b26dca99c6465a0e52 340 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 16 335 5.7E-152 T 21-04-2016 IPR022462 Lysine-2,3-aminomutase-like VFU_RS02995 b576bbac51c6f5b26dca99c6465a0e52 340 PIRSF PIRSF004911 3 340 2.6E-112 T 21-04-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase VFU_RS00590 3d8b67221c849a5bf3af0b93bc2ef995 442 PANTHER PTHR24095 32 423 4.5E-60 T 21-04-2016 VFU_RS00590 3d8b67221c849a5bf3af0b93bc2ef995 442 SUPERFAMILY SSF56801 5 434 5.76E-74 T 21-04-2016 VFU_RS00590 3d8b67221c849a5bf3af0b93bc2ef995 442 Gene3D G3DSA:3.40.50.980 134 275 5.0E-26 T 21-04-2016 VFU_RS00590 3d8b67221c849a5bf3af0b93bc2ef995 442 Gene3D G3DSA:2.30.38.10 296 342 3.0E-11 T 21-04-2016 VFU_RS00590 3d8b67221c849a5bf3af0b93bc2ef995 442 Pfam PF00501 AMP-binding enzyme 7 348 5.6E-46 T 21-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VFU_RS00590 3d8b67221c849a5bf3af0b93bc2ef995 442 ProSitePatterns PS00455 Putative AMP-binding domain signature. 124 135 - T 21-04-2016 IPR020845 AMP-binding, conserved site VFU_RS00590 3d8b67221c849a5bf3af0b93bc2ef995 442 Gene3D G3DSA:3.30.300.30 343 425 1.2E-13 T 21-04-2016 VFU_RS00590 3d8b67221c849a5bf3af0b93bc2ef995 442 Gene3D G3DSA:3.40.50.980 3 133 6.7E-13 T 21-04-2016 VFU_RS00590 3d8b67221c849a5bf3af0b93bc2ef995 442 Pfam PF13193 AMP-binding enzyme C-terminal domain 357 424 1.5E-7 T 21-04-2016 IPR025110 AMP-binding enzyme C-terminal domain VFU_RS06005 1ca68f0857add3f5e936df356e677207 310 Pfam PF05175 Methyltransferase small domain 134 216 1.2E-17 T 21-04-2016 IPR007848 Methyltransferase small domain GO:0008168 VFU_RS06005 1ca68f0857add3f5e936df356e677207 310 Gene3D G3DSA:1.10.8.10 15 106 7.6E-7 T 21-04-2016 VFU_RS06005 1ca68f0857add3f5e936df356e677207 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 302 1.7E-97 T 21-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 VFU_RS06005 1ca68f0857add3f5e936df356e677207 310 SUPERFAMILY SSF53335 16 293 3.19E-51 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS06005 1ca68f0857add3f5e936df356e677207 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 21-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VFU_RS06005 1ca68f0857add3f5e936df356e677207 310 PANTHER PTHR18895 4 298 9.8E-181 T 21-04-2016 VFU_RS06005 1ca68f0857add3f5e936df356e677207 310 PANTHER PTHR18895:SF66 4 298 9.8E-181 T 21-04-2016 VFU_RS06005 1ca68f0857add3f5e936df356e677207 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 5.1E-138 T 21-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 VFU_RS06005 1ca68f0857add3f5e936df356e677207 310 PIRSF PIRSF037167 2 307 4.0E-149 T 21-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 VFU_RS06005 1ca68f0857add3f5e936df356e677207 310 Gene3D G3DSA:3.40.50.150 108 289 1.5E-53 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS06005 1ca68f0857add3f5e936df356e677207 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 54.034 T 21-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 VFU_RS06005 1ca68f0857add3f5e936df356e677207 310 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 69 265 9.8E-60 T 21-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 VFU_RS06960 3394e5e9d8ccc23f6d1eb14da5d8b733 252 Pfam PF00813 FliP family 54 246 5.1E-75 T 21-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VFU_RS06960 3394e5e9d8ccc23f6d1eb14da5d8b733 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 224 249 7.0E-65 T 21-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VFU_RS06960 3394e5e9d8ccc23f6d1eb14da5d8b733 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 179 199 7.0E-65 T 21-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VFU_RS06960 3394e5e9d8ccc23f6d1eb14da5d8b733 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 91 110 7.0E-65 T 21-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VFU_RS06960 3394e5e9d8ccc23f6d1eb14da5d8b733 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 52 71 7.0E-65 T 21-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VFU_RS06960 3394e5e9d8ccc23f6d1eb14da5d8b733 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 71 91 7.0E-65 T 21-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VFU_RS06960 3394e5e9d8ccc23f6d1eb14da5d8b733 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 200 221 7.0E-65 T 21-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VFU_RS06960 3394e5e9d8ccc23f6d1eb14da5d8b733 252 PANTHER PTHR30587:SF0 35 252 2.7E-110 T 21-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VFU_RS06960 3394e5e9d8ccc23f6d1eb14da5d8b733 252 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 227 239 - T 21-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VFU_RS06960 3394e5e9d8ccc23f6d1eb14da5d8b733 252 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 179 194 - T 21-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VFU_RS06960 3394e5e9d8ccc23f6d1eb14da5d8b733 252 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 54 250 1.7E-76 T 21-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VFU_RS06960 3394e5e9d8ccc23f6d1eb14da5d8b733 252 PANTHER PTHR30587 35 252 2.7E-110 T 21-04-2016 VFU_RS06960 3394e5e9d8ccc23f6d1eb14da5d8b733 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 172 184 2.8E-15 T 21-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VFU_RS06960 3394e5e9d8ccc23f6d1eb14da5d8b733 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 122 136 2.8E-15 T 21-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VFU_RS06960 3394e5e9d8ccc23f6d1eb14da5d8b733 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 110 122 2.8E-15 T 21-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VFU_RS06960 3394e5e9d8ccc23f6d1eb14da5d8b733 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 240 250 2.8E-15 T 21-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VFU_RS06960 3394e5e9d8ccc23f6d1eb14da5d8b733 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 150 162 2.8E-15 T 21-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VFU_RS06960 3394e5e9d8ccc23f6d1eb14da5d8b733 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 50 59 2.8E-15 T 21-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VFU_RS02170 354ca75ba14a83dbf08f17de3304dc3e 205 Pfam PF00034 Cytochrome c 25 104 8.1E-11 T 21-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VFU_RS02170 354ca75ba14a83dbf08f17de3304dc3e 205 Pfam PF00034 Cytochrome c 116 201 2.0E-9 T 21-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VFU_RS02170 354ca75ba14a83dbf08f17de3304dc3e 205 PANTHER PTHR33751:SF3 1 205 4.7E-76 T 21-04-2016 VFU_RS02170 354ca75ba14a83dbf08f17de3304dc3e 205 PIRSF PIRSF000005 1 205 9.7E-64 T 21-04-2016 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 VFU_RS02170 354ca75ba14a83dbf08f17de3304dc3e 205 Gene3D G3DSA:1.10.760.10 29 131 2.0E-28 T 21-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VFU_RS02170 354ca75ba14a83dbf08f17de3304dc3e 205 SUPERFAMILY SSF46626 114 203 1.65E-19 T 21-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VFU_RS02170 354ca75ba14a83dbf08f17de3304dc3e 205 Gene3D G3DSA:1.10.760.10 132 203 4.7E-29 T 21-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VFU_RS02170 354ca75ba14a83dbf08f17de3304dc3e 205 PANTHER PTHR33751 1 205 4.7E-76 T 21-04-2016 VFU_RS02170 354ca75ba14a83dbf08f17de3304dc3e 205 PRINTS PR00605 Class IC cytochrome C signature 30 41 9.1E-5 T 21-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VFU_RS02170 354ca75ba14a83dbf08f17de3304dc3e 205 PRINTS PR00605 Class IC cytochrome C signature 79 101 9.1E-5 T 21-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VFU_RS02170 354ca75ba14a83dbf08f17de3304dc3e 205 SUPERFAMILY SSF46626 6 105 1.72E-21 T 21-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VFU_RS08000 61f13219076d994e201ceca58697b4cb 1486 PANTHER PTHR18937:SF201 99 529 0.0 T 21-04-2016 VFU_RS08000 61f13219076d994e201ceca58697b4cb 1486 PANTHER PTHR18937:SF201 554 625 0.0 T 21-04-2016 VFU_RS08000 61f13219076d994e201ceca58697b4cb 1486 PANTHER PTHR18937:SF201 1427 1460 0.0 T 21-04-2016 VFU_RS08000 61f13219076d994e201ceca58697b4cb 1486 PANTHER PTHR18937:SF201 898 939 0.0 T 21-04-2016 VFU_RS08000 61f13219076d994e201ceca58697b4cb 1486 PANTHER PTHR18937:SF201 978 1117 0.0 T 21-04-2016 VFU_RS08000 61f13219076d994e201ceca58697b4cb 1486 PANTHER PTHR18937:SF201 1213 1249 0.0 T 21-04-2016 VFU_RS08000 61f13219076d994e201ceca58697b4cb 1486 PANTHER PTHR18937:SF201 848 879 0.0 T 21-04-2016 VFU_RS08000 61f13219076d994e201ceca58697b4cb 1486 PANTHER PTHR18937:SF201 649 815 0.0 T 21-04-2016 VFU_RS08000 61f13219076d994e201ceca58697b4cb 1486 Pfam PF16330 MukB hinge domain 647 811 1.0E-72 T 21-04-2016 IPR032520 MukB, hinge domain VFU_RS08000 61f13219076d994e201ceca58697b4cb 1486 PIRSF PIRSF005246 1 1486 0.0 T 21-04-2016 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 VFU_RS08000 61f13219076d994e201ceca58697b4cb 1486 Pfam PF04310 MukB N-terminal 2 227 9.8E-122 T 21-04-2016 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 VFU_RS08000 61f13219076d994e201ceca58697b4cb 1486 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 1 1472 10.844 T 21-04-2016 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 VFU_RS08000 61f13219076d994e201ceca58697b4cb 1486 PANTHER PTHR18937 99 529 0.0 T 21-04-2016 VFU_RS08000 61f13219076d994e201ceca58697b4cb 1486 PANTHER PTHR18937 554 625 0.0 T 21-04-2016 VFU_RS08000 61f13219076d994e201ceca58697b4cb 1486 PANTHER PTHR18937 1427 1460 0.0 T 21-04-2016 VFU_RS08000 61f13219076d994e201ceca58697b4cb 1486 PANTHER PTHR18937 898 939 0.0 T 21-04-2016 VFU_RS08000 61f13219076d994e201ceca58697b4cb 1486 PANTHER PTHR18937 978 1117 0.0 T 21-04-2016 VFU_RS08000 61f13219076d994e201ceca58697b4cb 1486 PANTHER PTHR18937 1213 1249 0.0 T 21-04-2016 VFU_RS08000 61f13219076d994e201ceca58697b4cb 1486 PANTHER PTHR18937 848 879 0.0 T 21-04-2016 VFU_RS08000 61f13219076d994e201ceca58697b4cb 1486 PANTHER PTHR18937 649 815 0.0 T 21-04-2016 VFU_RS08000 61f13219076d994e201ceca58697b4cb 1486 SUPERFAMILY SSF52540 23 224 2.13E-23 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS08000 61f13219076d994e201ceca58697b4cb 1486 SUPERFAMILY SSF52540 1284 1434 1.13E-5 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS08000 61f13219076d994e201ceca58697b4cb 1486 SUPERFAMILY SSF52540 21 55 1.13E-5 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS08000 61f13219076d994e201ceca58697b4cb 1486 Gene3D G3DSA:3.40.1140.10 1 225 1.8E-43 T 21-04-2016 VFU_RS08000 61f13219076d994e201ceca58697b4cb 1486 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1337 1425 5.5E-15 T 21-04-2016 VFU_RS04970 6bfff412cf0f287b917b0274e14fface 330 SUPERFAMILY SSF53850 28 261 7.26E-38 T 21-04-2016 VFU_RS04970 6bfff412cf0f287b917b0274e14fface 330 Gene3D G3DSA:3.40.190.10 113 241 4.6E-15 T 21-04-2016 VFU_RS04970 6bfff412cf0f287b917b0274e14fface 330 PANTHER PTHR31528 11 329 2.2E-63 T 21-04-2016 IPR027939 NMT1/THI5 family GO:0009228 UniPathway: UPA00060 VFU_RS04970 6bfff412cf0f287b917b0274e14fface 330 Pfam PF09084 NMT1/THI5 like 41 255 3.8E-53 T 21-04-2016 IPR015168 SsuA/THI5-like VFU_RS03400 5a3c4f33588e8fad83253a408d2df34e 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 21-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 VFU_RS03400 5a3c4f33588e8fad83253a408d2df34e 206 PANTHER PTHR11831 1 206 1.1E-94 T 21-04-2016 IPR022801 Ribosomal protein S4/S9 VFU_RS03400 5a3c4f33588e8fad83253a408d2df34e 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 2.1E-30 T 21-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 VFU_RS03400 5a3c4f33588e8fad83253a408d2df34e 206 PANTHER PTHR11831:SF4 1 206 1.1E-94 T 21-04-2016 VFU_RS03400 5a3c4f33588e8fad83253a408d2df34e 206 Pfam PF01479 S4 domain 97 143 4.7E-18 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VFU_RS03400 5a3c4f33588e8fad83253a408d2df34e 206 SMART SM01390 3 95 6.9E-50 T 21-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 VFU_RS03400 5a3c4f33588e8fad83253a408d2df34e 206 Gene3D G3DSA:1.10.1050.10 1 101 5.7E-41 T 21-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 VFU_RS03400 5a3c4f33588e8fad83253a408d2df34e 206 Gene3D G3DSA:3.10.290.10 102 190 1.6E-31 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VFU_RS03400 5a3c4f33588e8fad83253a408d2df34e 206 SUPERFAMILY SSF55174 3 206 6.28E-72 T 21-04-2016 VFU_RS03400 5a3c4f33588e8fad83253a408d2df34e 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 5.7E-85 T 21-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 VFU_RS03400 5a3c4f33588e8fad83253a408d2df34e 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.377 T 21-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 VFU_RS03400 5a3c4f33588e8fad83253a408d2df34e 206 SMART SM00363 96 160 1.3E-19 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VFU_RS04805 9815b20ea0d6558487937cb8b2acb924 311 Gene3D G3DSA:3.40.50.620 1 186 2.2E-66 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VFU_RS04805 9815b20ea0d6558487937cb8b2acb924 311 Pfam PF01687 Riboflavin kinase 184 306 2.4E-38 T 21-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 VFU_RS04805 9815b20ea0d6558487937cb8b2acb924 311 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 307 5.5E-104 T 21-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 VFU_RS04805 9815b20ea0d6558487937cb8b2acb924 311 Gene3D G3DSA:2.40.30.30 188 308 9.4E-40 T 21-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 VFU_RS04805 9815b20ea0d6558487937cb8b2acb924 311 SUPERFAMILY SSF82114 175 308 2.09E-44 T 21-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 VFU_RS04805 9815b20ea0d6558487937cb8b2acb924 311 PANTHER PTHR22749 1 308 2.8E-140 T 21-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 VFU_RS04805 9815b20ea0d6558487937cb8b2acb924 311 SMART SM00904 183 307 9.5E-63 T 21-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 VFU_RS04805 9815b20ea0d6558487937cb8b2acb924 311 PIRSF PIRSF004491 1 311 5.3E-105 T 21-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 VFU_RS04805 9815b20ea0d6558487937cb8b2acb924 311 SUPERFAMILY SSF52374 15 175 8.16E-34 T 21-04-2016 VFU_RS04805 9815b20ea0d6558487937cb8b2acb924 311 PANTHER PTHR22749:SF0 1 308 2.8E-140 T 21-04-2016 VFU_RS04805 9815b20ea0d6558487937cb8b2acb924 311 Pfam PF06574 FAD synthetase 12 167 2.4E-57 T 21-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 VFU_RS02420 be303c130250fe79a8e706ee05c23161 434 TIGRFAM TIGR00797 matE: MATE efflux family protein 11 405 7.2E-71 T 21-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VFU_RS02420 be303c130250fe79a8e706ee05c23161 434 PANTHER PTHR11206:SF94 1 429 5.9E-129 T 21-04-2016 VFU_RS02420 be303c130250fe79a8e706ee05c23161 434 Pfam PF01554 MatE 238 386 1.0E-10 T 21-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VFU_RS02420 be303c130250fe79a8e706ee05c23161 434 Pfam PF01554 MatE 11 171 2.7E-23 T 21-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VFU_RS02420 be303c130250fe79a8e706ee05c23161 434 PANTHER PTHR11206 1 429 5.9E-129 T 21-04-2016 VFU_RS11535 0f4d772d145b8e00b2422dc8121d8995 626 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 385 414 7.4E-23 T 21-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VFU_RS11535 0f4d772d145b8e00b2422dc8121d8995 626 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 462 489 7.4E-23 T 21-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VFU_RS11535 0f4d772d145b8e00b2422dc8121d8995 626 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 491 520 7.4E-23 T 21-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VFU_RS11535 0f4d772d145b8e00b2422dc8121d8995 626 Gene3D G3DSA:1.10.287.950 382 596 1.2E-48 T 21-04-2016 VFU_RS11535 0f4d772d145b8e00b2422dc8121d8995 626 SMART SM00304 295 349 2.3E-5 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS11535 0f4d772d145b8e00b2422dc8121d8995 626 SMART SM00283 364 625 4.0E-55 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VFU_RS11535 0f4d772d145b8e00b2422dc8121d8995 626 PANTHER PTHR32089:SF62 1 626 8.4E-148 T 21-04-2016 VFU_RS11535 0f4d772d145b8e00b2422dc8121d8995 626 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 427 624 4.8E-42 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VFU_RS11535 0f4d772d145b8e00b2422dc8121d8995 626 SUPERFAMILY SSF58104 315 625 1.92E-61 T 21-04-2016 VFU_RS11535 0f4d772d145b8e00b2422dc8121d8995 626 Pfam PF00672 HAMP domain 276 344 6.2E-8 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS11535 0f4d772d145b8e00b2422dc8121d8995 626 PANTHER PTHR32089 1 626 8.4E-148 T 21-04-2016 VFU_RS01325 c027d462db677e4d872b33a19b9a8796 671 SUPERFAMILY SSF52540 1 640 3.09E-163 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS01325 c027d462db677e4d872b33a19b9a8796 671 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 669 0.0 T 21-04-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 VFU_RS01325 c027d462db677e4d872b33a19b9a8796 671 Pfam PF13361 UvrD-like helicase C-terminal domain 271 615 4.4E-75 T 21-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VFU_RS01325 c027d462db677e4d872b33a19b9a8796 671 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 2.1E-78 T 21-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 VFU_RS01325 c027d462db677e4d872b33a19b9a8796 671 Gene3D G3DSA:3.40.50.300 280 382 3.7E-63 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS01325 c027d462db677e4d872b33a19b9a8796 671 Gene3D G3DSA:3.40.50.300 552 641 3.7E-63 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS01325 c027d462db677e4d872b33a19b9a8796 671 PANTHER PTHR11070 1 669 0.0 T 21-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 VFU_RS01325 c027d462db677e4d872b33a19b9a8796 671 Gene3D G3DSA:1.10.10.160 108 181 2.6E-26 T 21-04-2016 IPR013986 DExx box DNA helicase domain VFU_RS01325 c027d462db677e4d872b33a19b9a8796 671 Gene3D G3DSA:1.10.486.10 383 516 5.3E-42 T 21-04-2016 VFU_RS01325 c027d462db677e4d872b33a19b9a8796 671 Gene3D G3DSA:3.40.50.300 2 104 1.3E-65 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS01325 c027d462db677e4d872b33a19b9a8796 671 Gene3D G3DSA:3.40.50.300 182 279 1.3E-65 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS01325 c027d462db677e4d872b33a19b9a8796 671 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 670 40.721 T 21-04-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 VFU_RS01325 c027d462db677e4d872b33a19b9a8796 671 PANTHER PTHR11070:SF19 1 669 0.0 T 21-04-2016 VFU_RS13370 a1799dca83d3e2a06ec6ea37cd970704 556 Pfam PF00182 Chitinase class I 105 327 2.5E-31 T 21-04-2016 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 VFU_RS13370 a1799dca83d3e2a06ec6ea37cd970704 556 SMART SM00495 508 553 0.0081 T 21-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VFU_RS13370 a1799dca83d3e2a06ec6ea37cd970704 556 SMART SM00495 434 476 1.2E-8 T 21-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VFU_RS13370 a1799dca83d3e2a06ec6ea37cd970704 556 PANTHER PTHR22595 54 358 1.9E-145 T 21-04-2016 VFU_RS13370 a1799dca83d3e2a06ec6ea37cd970704 556 SUPERFAMILY SSF53955 87 350 7.87E-54 T 21-04-2016 IPR023346 Lysozyme-like domain VFU_RS13370 a1799dca83d3e2a06ec6ea37cd970704 556 Gene3D G3DSA:2.10.10.20 435 474 1.7E-14 T 21-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VFU_RS13370 a1799dca83d3e2a06ec6ea37cd970704 556 Gene3D G3DSA:1.10.530.10 211 349 5.9E-55 T 21-04-2016 VFU_RS13370 a1799dca83d3e2a06ec6ea37cd970704 556 Gene3D G3DSA:1.10.530.10 87 154 5.9E-55 T 21-04-2016 VFU_RS13370 a1799dca83d3e2a06ec6ea37cd970704 556 SUPERFAMILY SSF51055 435 475 2.35E-12 T 21-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VFU_RS13370 a1799dca83d3e2a06ec6ea37cd970704 556 PANTHER PTHR22595:SF49 54 358 1.9E-145 T 21-04-2016 VFU_RS13370 a1799dca83d3e2a06ec6ea37cd970704 556 Pfam PF02839 Carbohydrate binding domain 435 473 1.2E-11 T 21-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VFU_RS10075 1ec909165b1d4210360511c6442f6d38 231 PANTHER PTHR38834:SF1 3 231 9.7E-90 T 21-04-2016 VFU_RS10075 1ec909165b1d4210360511c6442f6d38 231 PANTHER PTHR38834 3 231 9.7E-90 T 21-04-2016 VFU_RS10075 1ec909165b1d4210360511c6442f6d38 231 SUPERFAMILY SSF53850 4 230 1.78E-31 T 21-04-2016 VFU_RS10075 1ec909165b1d4210360511c6442f6d38 231 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 8 214 9.6E-20 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VFU_RS10075 1ec909165b1d4210360511c6442f6d38 231 Gene3D G3DSA:3.40.190.10 8 80 2.2E-11 T 21-04-2016 VFU_RS10075 1ec909165b1d4210360511c6442f6d38 231 Gene3D G3DSA:3.40.190.10 186 230 2.2E-11 T 21-04-2016 VFU_RS10075 1ec909165b1d4210360511c6442f6d38 231 Gene3D G3DSA:3.40.190.10 81 173 3.5E-4 T 21-04-2016 VFU_RS08240 840227634463c7f10b051d5573abd56b 381 SUPERFAMILY SSF53850 31 377 2.0E-42 T 21-04-2016 VFU_RS08240 840227634463c7f10b051d5573abd56b 381 PIRSF PIRSF029172 1 380 5.1E-171 T 21-04-2016 IPR027020 Protein ynjB VFU_RS08240 840227634463c7f10b051d5573abd56b 381 Gene3D G3DSA:3.40.190.10 151 312 7.7E-13 T 21-04-2016 VFU_RS08240 840227634463c7f10b051d5573abd56b 381 Pfam PF13416 Bacterial extracellular solute-binding protein 54 326 4.1E-26 T 21-04-2016 VFU_RS08240 840227634463c7f10b051d5573abd56b 381 PANTHER PTHR30006:SF12 223 381 1.3E-159 T 21-04-2016 VFU_RS08240 840227634463c7f10b051d5573abd56b 381 PANTHER PTHR30006:SF12 5 205 1.3E-159 T 21-04-2016 VFU_RS08240 840227634463c7f10b051d5573abd56b 381 Gene3D G3DSA:3.40.190.10 30 150 9.3E-21 T 21-04-2016 VFU_RS08240 840227634463c7f10b051d5573abd56b 381 Gene3D G3DSA:3.40.190.10 313 343 9.3E-21 T 21-04-2016 VFU_RS08240 840227634463c7f10b051d5573abd56b 381 PANTHER PTHR30006 223 381 1.3E-159 T 21-04-2016 VFU_RS08240 840227634463c7f10b051d5573abd56b 381 PANTHER PTHR30006 5 205 1.3E-159 T 21-04-2016 VFU_RS03550 1830eea68ecf61b515f5d76e7c756132 336 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 6 197 1.4E-77 T 21-04-2016 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 VFU_RS03550 1830eea68ecf61b515f5d76e7c756132 336 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 273 285 - T 21-04-2016 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474 VFU_RS03550 1830eea68ecf61b515f5d76e7c756132 336 PIRSF PIRSF000904 1 335 1.7E-126 T 21-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 VFU_RS03550 1830eea68ecf61b515f5d76e7c756132 336 PIRSF PIRSF500210 1 335 4.7E-129 T 21-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 VFU_RS03550 1830eea68ecf61b515f5d76e7c756132 336 Gene3D G3DSA:3.30.540.10 5 198 4.3E-81 T 21-04-2016 VFU_RS03550 1830eea68ecf61b515f5d76e7c756132 336 Gene3D G3DSA:3.40.190.80 200 332 6.6E-60 T 21-04-2016 VFU_RS03550 1830eea68ecf61b515f5d76e7c756132 336 SUPERFAMILY SSF56655 3 331 2.49E-114 T 21-04-2016 VFU_RS03550 1830eea68ecf61b515f5d76e7c756132 336 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 5 333 43.324 T 21-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 VFU_RS03550 1830eea68ecf61b515f5d76e7c756132 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 30 57 3.1E-76 T 21-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 VFU_RS03550 1830eea68ecf61b515f5d76e7c756132 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 307 332 3.1E-76 T 21-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 VFU_RS03550 1830eea68ecf61b515f5d76e7c756132 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 151 174 3.1E-76 T 21-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 VFU_RS03550 1830eea68ecf61b515f5d76e7c756132 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 208 235 3.1E-76 T 21-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 VFU_RS03550 1830eea68ecf61b515f5d76e7c756132 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 67 93 3.1E-76 T 21-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 VFU_RS03550 1830eea68ecf61b515f5d76e7c756132 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 182 205 3.1E-76 T 21-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 VFU_RS03550 1830eea68ecf61b515f5d76e7c756132 336 PANTHER PTHR11556 2 332 2.5E-190 T 21-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 VFU_RS14550 2157199664baf41673fc93b18b241ab5 117 TIGRFAM TIGR00526 folB_dom: FolB domain 1 116 8.1E-38 T 21-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VFU_RS14550 2157199664baf41673fc93b18b241ab5 117 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 114 2.1E-29 T 21-04-2016 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VFU_RS14550 2157199664baf41673fc93b18b241ab5 117 Pfam PF02152 Dihydroneopterin aldolase 4 113 7.6E-33 T 21-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VFU_RS14550 2157199664baf41673fc93b18b241ab5 117 Gene3D G3DSA:3.30.1130.10 1 115 2.1E-43 T 21-04-2016 VFU_RS14550 2157199664baf41673fc93b18b241ab5 117 SMART SM00905 4 114 2.3E-49 T 21-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VFU_RS14550 2157199664baf41673fc93b18b241ab5 117 PANTHER PTHR20941 1 117 1.4E-36 T 21-04-2016 VFU_RS14550 2157199664baf41673fc93b18b241ab5 117 SUPERFAMILY SSF55620 1 115 4.73E-37 T 21-04-2016 VFU_RS15205 f0a7e4e348b49544c9d54ddbe9207915 481 PIRSF PIRSF028153 1 481 3.5E-192 T 21-04-2016 IPR016871 MSHA biogenesis protein, MshI VFU_RS15205 f0a7e4e348b49544c9d54ddbe9207915 481 SUPERFAMILY SSF53067 45 155 3.63E-12 T 21-04-2016 VFU_RS02690 a5d7b1678b7d97301144ecc4846b3051 459 PIRSF PIRSF002746 9 459 4.9E-148 T 21-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 VFU_RS02690 a5d7b1678b7d97301144ecc4846b3051 459 PANTHER PTHR30354:SF2 9 459 5.1E-242 T 21-04-2016 VFU_RS02690 a5d7b1678b7d97301144ecc4846b3051 459 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 14 459 2.2E-108 T 21-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 VFU_RS02690 a5d7b1678b7d97301144ecc4846b3051 459 PANTHER PTHR30354 9 459 5.1E-242 T 21-04-2016 VFU_RS02690 a5d7b1678b7d97301144ecc4846b3051 459 Pfam PF02447 GntP family permease 13 458 6.4E-121 T 21-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 VFU_RS07015 75859d9e40db17a01c126f33d4c5017d 355 PANTHER PTHR10314:SF126 7 350 5.4E-209 T 21-04-2016 VFU_RS07015 75859d9e40db17a01c126f33d4c5017d 355 PANTHER PTHR10314 7 350 5.4E-209 T 21-04-2016 VFU_RS07015 75859d9e40db17a01c126f33d4c5017d 355 Gene3D G3DSA:3.40.50.1100 48 143 1.2E-22 T 21-04-2016 VFU_RS07015 75859d9e40db17a01c126f33d4c5017d 355 Gene3D G3DSA:3.40.50.1100 144 334 1.3E-37 T 21-04-2016 VFU_RS07015 75859d9e40db17a01c126f33d4c5017d 355 SUPERFAMILY SSF53686 23 335 4.19E-70 T 21-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VFU_RS07015 75859d9e40db17a01c126f33d4c5017d 355 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 36 316 9.7E-41 T 21-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VFU_RS10195 103be0b7abf1326a32452651762c726a 410 SUPERFAMILY SSF51445 48 408 7.62E-95 T 21-04-2016 IPR017853 Glycoside hydrolase superfamily VFU_RS10195 103be0b7abf1326a32452651762c726a 410 Pfam PF07745 Glycosyl hydrolase family 53 51 407 1.9E-123 T 21-04-2016 IPR011683 Glycosyl hydrolase family 53 GO:0015926 VFU_RS10195 103be0b7abf1326a32452651762c726a 410 PANTHER PTHR34983 6 408 1.8E-161 T 21-04-2016 VFU_RS10195 103be0b7abf1326a32452651762c726a 410 Gene3D G3DSA:3.20.20.80 41 408 2.5E-144 T 21-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VFU_RS10195 103be0b7abf1326a32452651762c726a 410 PANTHER PTHR34983:SF1 6 408 1.8E-161 T 21-04-2016 VFU_RS14740 5f09c032212f00e52dc4168e43e2e128 606 SUPERFAMILY SSF55073 450 600 1.18E-40 T 21-04-2016 IPR029787 Nucleotide cyclase VFU_RS14740 5f09c032212f00e52dc4168e43e2e128 606 Gene3D G3DSA:3.30.450.20 190 282 6.8E-19 T 21-04-2016 VFU_RS14740 5f09c032212f00e52dc4168e43e2e128 606 Gene3D G3DSA:3.30.450.20 335 434 1.4E-13 T 21-04-2016 VFU_RS14740 5f09c032212f00e52dc4168e43e2e128 606 Pfam PF00990 Diguanylate cyclase, GGDEF domain 447 595 9.0E-38 T 21-04-2016 IPR000160 GGDEF domain VFU_RS14740 5f09c032212f00e52dc4168e43e2e128 606 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 329 441 2.9E-13 T 21-04-2016 IPR000014 PAS domain VFU_RS14740 5f09c032212f00e52dc4168e43e2e128 606 Gene3D G3DSA:3.30.450.20 58 189 7.2E-25 T 21-04-2016 VFU_RS14740 5f09c032212f00e52dc4168e43e2e128 606 PANTHER PTHR10799:SF750 269 446 5.5E-16 T 21-04-2016 VFU_RS14740 5f09c032212f00e52dc4168e43e2e128 606 PANTHER PTHR10799:SF750 1 10 5.5E-16 T 21-04-2016 VFU_RS14740 5f09c032212f00e52dc4168e43e2e128 606 PANTHER PTHR10799:SF750 480 596 5.5E-16 T 21-04-2016 VFU_RS14740 5f09c032212f00e52dc4168e43e2e128 606 SUPERFAMILY SSF103190 190 279 9.42E-16 T 21-04-2016 IPR029151 Periplasmic sensor domain-like VFU_RS14740 5f09c032212f00e52dc4168e43e2e128 606 SMART SM00267 434 599 7.2E-47 T 21-04-2016 IPR000160 GGDEF domain VFU_RS14740 5f09c032212f00e52dc4168e43e2e128 606 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 443 598 1.2E-41 T 21-04-2016 IPR000160 GGDEF domain VFU_RS14740 5f09c032212f00e52dc4168e43e2e128 606 PANTHER PTHR10799 269 446 5.5E-16 T 21-04-2016 VFU_RS14740 5f09c032212f00e52dc4168e43e2e128 606 PANTHER PTHR10799 1 10 5.5E-16 T 21-04-2016 VFU_RS14740 5f09c032212f00e52dc4168e43e2e128 606 PANTHER PTHR10799 480 596 5.5E-16 T 21-04-2016 VFU_RS14740 5f09c032212f00e52dc4168e43e2e128 606 Gene3D G3DSA:1.20.5.170 10 56 8.2E-24 T 21-04-2016 VFU_RS14740 5f09c032212f00e52dc4168e43e2e128 606 Gene3D G3DSA:3.30.70.270 447 601 1.5E-43 T 21-04-2016 VFU_RS14740 5f09c032212f00e52dc4168e43e2e128 606 SUPERFAMILY SSF55785 333 443 1.29E-16 T 21-04-2016 IPR000014 PAS domain VFU_RS14740 5f09c032212f00e52dc4168e43e2e128 606 Pfam PF13426 PAS domain 333 433 2.0E-8 T 21-04-2016 IPR000014 PAS domain VFU_RS14740 5f09c032212f00e52dc4168e43e2e128 606 SUPERFAMILY SSF103190 21 189 9.42E-32 T 21-04-2016 IPR029151 Periplasmic sensor domain-like VFU_RS09770 6da722ab0974b935c96f0dc87e271563 815 Gene3D G3DSA:3.90.55.10 500 606 6.4E-32 T 21-04-2016 VFU_RS09770 6da722ab0974b935c96f0dc87e271563 815 SUPERFAMILY SSF53706 44 667 1.31E-160 T 21-04-2016 VFU_RS09770 6da722ab0974b935c96f0dc87e271563 815 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 43 813 0.0 T 21-04-2016 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 VFU_RS09770 6da722ab0974b935c96f0dc87e271563 815 Gene3D G3DSA:2.40.40.20 651 808 3.1E-56 T 21-04-2016 VFU_RS09770 6da722ab0974b935c96f0dc87e271563 815 Pfam PF01568 Molydopterin dinucleotide binding domain 675 787 2.1E-25 T 21-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 VFU_RS09770 6da722ab0974b935c96f0dc87e271563 815 Pfam PF00384 Molybdopterin oxidoreductase 86 555 7.8E-99 T 21-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 VFU_RS09770 6da722ab0974b935c96f0dc87e271563 815 PANTHER PTHR11615 443 814 0.0 T 21-04-2016 VFU_RS09770 6da722ab0974b935c96f0dc87e271563 815 PANTHER PTHR11615 1 425 0.0 T 21-04-2016 VFU_RS09770 6da722ab0974b935c96f0dc87e271563 815 Gene3D G3DSA:3.40.50.740 79 180 1.1E-44 T 21-04-2016 VFU_RS09770 6da722ab0974b935c96f0dc87e271563 815 Gene3D G3DSA:3.40.50.740 393 499 1.1E-44 T 21-04-2016 VFU_RS09770 6da722ab0974b935c96f0dc87e271563 815 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 498 515 - T 21-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 VFU_RS09770 6da722ab0974b935c96f0dc87e271563 815 SUPERFAMILY SSF50692 670 812 1.06E-42 T 21-04-2016 IPR009010 Aspartate decarboxylase-like domain VFU_RS09770 6da722ab0974b935c96f0dc87e271563 815 Gene3D G3DSA:3.40.228.10 184 392 7.9E-57 T 21-04-2016 VFU_RS09770 6da722ab0974b935c96f0dc87e271563 815 PANTHER PTHR11615:SF19 443 814 0.0 T 21-04-2016 VFU_RS09770 6da722ab0974b935c96f0dc87e271563 815 PANTHER PTHR11615:SF19 1 425 0.0 T 21-04-2016 VFU_RS09770 6da722ab0974b935c96f0dc87e271563 815 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 32 2.6E-5 T 21-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VFU_RS14245 4e61a303fd0e7216f78dc31c54a723af 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.458 T 21-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VFU_RS14245 4e61a303fd0e7216f78dc31c54a723af 360 PANTHER PTHR22926 2 360 7.5E-191 T 21-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VFU_RS14245 4e61a303fd0e7216f78dc31c54a723af 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 21-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VFU_RS14245 4e61a303fd0e7216f78dc31c54a723af 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 21-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VFU_RS14245 4e61a303fd0e7216f78dc31c54a723af 360 Pfam PF00953 Glycosyl transferase family 4 99 283 9.4E-37 T 21-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VFU_RS14245 4e61a303fd0e7216f78dc31c54a723af 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 1.0E-156 T 21-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VFU_RS14245 4e61a303fd0e7216f78dc31c54a723af 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 1.0E-5 T 21-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VFU_RS14245 4e61a303fd0e7216f78dc31c54a723af 360 PANTHER PTHR22926:SF5 2 360 7.5E-191 T 21-04-2016 VFU_RS07785 ed89f25cfdb6353b4b8fdc89dc71a9cc 205 Gene3D G3DSA:1.10.3890.10 3 204 1.1E-87 T 21-04-2016 IPR007451 Uncharacterised protein family UPF0274 VFU_RS07785 ed89f25cfdb6353b4b8fdc89dc71a9cc 205 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 203 36.051 T 21-04-2016 IPR007451 Uncharacterised protein family UPF0274 VFU_RS07785 ed89f25cfdb6353b4b8fdc89dc71a9cc 205 Pfam PF04356 Protein of unknown function (DUF489) 7 195 5.2E-77 T 21-04-2016 IPR007451 Uncharacterised protein family UPF0274 VFU_RS07785 ed89f25cfdb6353b4b8fdc89dc71a9cc 205 PANTHER PTHR38100:SF1 2 205 4.6E-98 T 21-04-2016 VFU_RS07785 ed89f25cfdb6353b4b8fdc89dc71a9cc 205 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 194 2.0E-98 T 21-04-2016 IPR007451 Uncharacterised protein family UPF0274 VFU_RS07785 ed89f25cfdb6353b4b8fdc89dc71a9cc 205 SUPERFAMILY SSF101322 2 204 1.44E-80 T 21-04-2016 IPR007451 Uncharacterised protein family UPF0274 VFU_RS07785 ed89f25cfdb6353b4b8fdc89dc71a9cc 205 PANTHER PTHR38100 2 205 4.6E-98 T 21-04-2016 VFU_RS05995 e7fbacdc8a8bc66d021fc36f33424f98 376 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 353 1.3E-136 T 21-04-2016 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 VFU_RS05995 e7fbacdc8a8bc66d021fc36f33424f98 376 Gene3D G3DSA:3.40.1690.10 218 357 5.4E-62 T 21-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal VFU_RS05995 e7fbacdc8a8bc66d021fc36f33424f98 376 PANTHER PTHR30531 1 361 5.7E-249 T 21-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VFU_RS05995 e7fbacdc8a8bc66d021fc36f33424f98 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 8.4E-40 T 21-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VFU_RS05995 e7fbacdc8a8bc66d021fc36f33424f98 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 8.4E-40 T 21-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VFU_RS05995 e7fbacdc8a8bc66d021fc36f33424f98 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 8.4E-40 T 21-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VFU_RS05995 e7fbacdc8a8bc66d021fc36f33424f98 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 8.4E-40 T 21-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VFU_RS05995 e7fbacdc8a8bc66d021fc36f33424f98 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 8.4E-40 T 21-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VFU_RS05995 e7fbacdc8a8bc66d021fc36f33424f98 376 SUPERFAMILY SSF160544 250 355 1.29E-39 T 21-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal VFU_RS05995 e7fbacdc8a8bc66d021fc36f33424f98 376 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 5.0E-123 T 21-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VFU_RS05995 e7fbacdc8a8bc66d021fc36f33424f98 376 PANTHER PTHR30531:SF4 1 361 5.7E-249 T 21-04-2016 VFU_RS01995 365e15ecb8e5f582ab7dce1703ecbeae 154 PANTHER PTHR30154 1 154 1.4E-64 T 21-04-2016 VFU_RS01995 365e15ecb8e5f582ab7dce1703ecbeae 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 1.4E-10 T 21-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VFU_RS01995 365e15ecb8e5f582ab7dce1703ecbeae 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 1.4E-10 T 21-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VFU_RS01995 365e15ecb8e5f582ab7dce1703ecbeae 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 1.4E-10 T 21-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VFU_RS01995 365e15ecb8e5f582ab7dce1703ecbeae 154 Pfam PF01037 Lrp/AsnC ligand binding domain 75 145 2.4E-16 T 21-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VFU_RS01995 365e15ecb8e5f582ab7dce1703ecbeae 154 Gene3D G3DSA:3.30.70.920 71 145 1.5E-22 T 21-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VFU_RS01995 365e15ecb8e5f582ab7dce1703ecbeae 154 Gene3D G3DSA:1.10.10.10 4 59 9.2E-22 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS01995 365e15ecb8e5f582ab7dce1703ecbeae 154 SUPERFAMILY SSF46785 7 68 6.39E-19 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS01995 365e15ecb8e5f582ab7dce1703ecbeae 154 PANTHER PTHR30154:SF2 1 154 1.4E-64 T 21-04-2016 VFU_RS01995 365e15ecb8e5f582ab7dce1703ecbeae 154 SMART SM00344 8 115 2.9E-41 T 21-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VFU_RS01995 365e15ecb8e5f582ab7dce1703ecbeae 154 Pfam PF13404 AsnC-type helix-turn-helix domain 8 49 9.4E-15 T 21-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VFU_RS01995 365e15ecb8e5f582ab7dce1703ecbeae 154 SUPERFAMILY SSF54909 69 154 5.09E-19 T 21-04-2016 IPR011008 Dimeric alpha-beta barrel VFU_RS07345 91de5cb5a2dd02417df8df74eb1ddf86 215 PANTHER PTHR20857 1 208 5.0E-76 T 21-04-2016 VFU_RS07345 91de5cb5a2dd02417df8df74eb1ddf86 215 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 6 198 7.7E-66 T 21-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 VFU_RS07345 91de5cb5a2dd02417df8df74eb1ddf86 215 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 4 204 27.469 T 21-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 VFU_RS07345 91de5cb5a2dd02417df8df74eb1ddf86 215 PANTHER PTHR20857:SF15 1 208 5.0E-76 T 21-04-2016 VFU_RS07345 91de5cb5a2dd02417df8df74eb1ddf86 215 Gene3D G3DSA:3.20.20.70 3 206 5.8E-76 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS07345 91de5cb5a2dd02417df8df74eb1ddf86 215 SUPERFAMILY SSF51391 3 201 1.31E-65 T 21-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 VFU_RS07345 91de5cb5a2dd02417df8df74eb1ddf86 215 Pfam PF02581 Thiamine monophosphate synthase/TENI 6 186 7.3E-65 T 21-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 VFU_RS14715 f8e537c451d42271c05fe7510e238ec9 592 Gene3D G3DSA:3.40.630.30 319 455 2.5E-7 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase VFU_RS14715 f8e537c451d42271c05fe7510e238ec9 592 SUPERFAMILY SSF69593 51 210 1.83E-8 T 21-04-2016 VFU_RS14715 f8e537c451d42271c05fe7510e238ec9 592 Pfam PF13444 Acetyltransferase (GNAT) domain 331 432 3.8E-22 T 21-04-2016 VFU_RS14715 f8e537c451d42271c05fe7510e238ec9 592 PANTHER PTHR37323:SF1 1 588 7.7E-126 T 21-04-2016 VFU_RS14715 f8e537c451d42271c05fe7510e238ec9 592 SUPERFAMILY SSF55729 314 454 5.83E-25 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase VFU_RS14715 f8e537c451d42271c05fe7510e238ec9 592 PANTHER PTHR37323 1 588 7.7E-126 T 21-04-2016 VFU_RS14715 f8e537c451d42271c05fe7510e238ec9 592 Pfam PF01553 Acyltransferase 68 195 4.1E-6 T 21-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VFU_RS14715 f8e537c451d42271c05fe7510e238ec9 592 SMART SM00563 75 199 1.3E-6 T 21-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VFU_RS07145 a88fa3d3ff3c38e237201a5d2ca3912e 651 PIRSF PIRSF005091 11 637 4.5E-93 T 21-04-2016 IPR012160 Lipoteichoic acid synthase-like KEGG: 00440+2.7.8.-|KEGG: 00513+2.7.8.-|KEGG: 00540+2.7.8.-|KEGG: 00564+2.7.8.-|KEGG: 00600+2.7.8.-|KEGG: 00770+2.7.8.-|UniPathway: UPA00556 VFU_RS07145 a88fa3d3ff3c38e237201a5d2ca3912e 651 PANTHER PTHR10342 282 600 5.6E-79 T 21-04-2016 VFU_RS07145 a88fa3d3ff3c38e237201a5d2ca3912e 651 PANTHER PTHR10342:SF236 282 600 5.6E-79 T 21-04-2016 VFU_RS07145 a88fa3d3ff3c38e237201a5d2ca3912e 651 Pfam PF00884 Sulfatase 293 563 7.0E-43 T 21-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 VFU_RS07145 a88fa3d3ff3c38e237201a5d2ca3912e 651 Gene3D G3DSA:3.40.720.10 293 579 1.1E-40 T 21-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VFU_RS07145 a88fa3d3ff3c38e237201a5d2ca3912e 651 SUPERFAMILY SSF53649 291 588 1.57E-64 T 21-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VFU_RS11260 bb80915cc353c5553b199a1429427aba 313 Gene3D G3DSA:3.40.50.1100 128 299 1.2E-16 T 21-04-2016 VFU_RS11260 bb80915cc353c5553b199a1429427aba 313 Gene3D G3DSA:3.40.50.1100 43 117 2.0E-5 T 21-04-2016 VFU_RS11260 bb80915cc353c5553b199a1429427aba 313 PIRSF PIRSF006278 4 308 4.7E-22 T 21-04-2016 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase VFU_RS11260 bb80915cc353c5553b199a1429427aba 313 SUPERFAMILY SSF53686 15 303 9.21E-52 T 21-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VFU_RS07955 a803be35c5df16455a93288f4c94e26e 228 Pfam PF09335 SNARE associated Golgi protein 65 182 2.3E-21 T 21-04-2016 IPR032816 SNARE associated Golgi protein VFU_RS07955 a803be35c5df16455a93288f4c94e26e 228 PANTHER PTHR12677 5 216 1.8E-42 T 21-04-2016 IPR015414 Transmembrane protein TMEM64/TMEM41 GO:0016021 VFU_RS15160 bb5bee49d62bf7c0f3b45d81227cf9e4 191 Gene3D G3DSA:3.30.700.10 8 54 2.6E-6 T 21-04-2016 VFU_RS15160 bb5bee49d62bf7c0f3b45d81227cf9e4 191 PANTHER PTHR30093 1 61 1.3E-13 T 21-04-2016 VFU_RS15160 bb5bee49d62bf7c0f3b45d81227cf9e4 191 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 3 27 3.1E-7 T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site VFU_RS15160 bb5bee49d62bf7c0f3b45d81227cf9e4 191 SUPERFAMILY SSF54523 8 166 8.63E-14 T 21-04-2016 VFU_RS15160 bb5bee49d62bf7c0f3b45d81227cf9e4 191 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 28 1.7E-6 T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site VFU_RS15160 bb5bee49d62bf7c0f3b45d81227cf9e4 191 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site VFU_RS14100 0b2a2a57f5fd7891f8825e0692dba85d 489 SUPERFAMILY SSF46548 2 155 1.26E-34 T 21-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 VFU_RS14100 0b2a2a57f5fd7891f8825e0692dba85d 489 Gene3D G3DSA:3.50.50.60 234 407 2.6E-39 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS14100 0b2a2a57f5fd7891f8825e0692dba85d 489 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 146 459 6.4E-25 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS14100 0b2a2a57f5fd7891f8825e0692dba85d 489 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 38 131 2.2E-24 T 21-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II VFU_RS14100 0b2a2a57f5fd7891f8825e0692dba85d 489 SUPERFAMILY SSF51971 143 407 7.65E-65 T 21-04-2016 VFU_RS14100 0b2a2a57f5fd7891f8825e0692dba85d 489 PANTHER PTHR11938 43 319 1.8E-148 T 21-04-2016 VFU_RS14100 0b2a2a57f5fd7891f8825e0692dba85d 489 PANTHER PTHR11938 335 473 1.8E-148 T 21-04-2016 VFU_RS14100 0b2a2a57f5fd7891f8825e0692dba85d 489 PRINTS PR00419 Adrenodoxin reductase family signature 286 300 1.6E-23 T 21-04-2016 VFU_RS14100 0b2a2a57f5fd7891f8825e0692dba85d 489 PRINTS PR00419 Adrenodoxin reductase family signature 211 221 1.6E-23 T 21-04-2016 VFU_RS14100 0b2a2a57f5fd7891f8825e0692dba85d 489 PRINTS PR00419 Adrenodoxin reductase family signature 169 182 1.6E-23 T 21-04-2016 VFU_RS14100 0b2a2a57f5fd7891f8825e0692dba85d 489 PRINTS PR00419 Adrenodoxin reductase family signature 146 168 1.6E-23 T 21-04-2016 VFU_RS14100 0b2a2a57f5fd7891f8825e0692dba85d 489 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 478 4.0E-198 T 21-04-2016 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 VFU_RS14100 0b2a2a57f5fd7891f8825e0692dba85d 489 PANTHER PTHR11938:SF75 43 319 1.8E-148 T 21-04-2016 VFU_RS14100 0b2a2a57f5fd7891f8825e0692dba85d 489 PANTHER PTHR11938:SF75 335 473 1.8E-148 T 21-04-2016 VFU_RS14100 0b2a2a57f5fd7891f8825e0692dba85d 489 Gene3D G3DSA:3.40.50.720 411 481 4.6E-38 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS14100 0b2a2a57f5fd7891f8825e0692dba85d 489 Gene3D G3DSA:3.40.50.720 148 233 4.6E-38 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS14100 0b2a2a57f5fd7891f8825e0692dba85d 489 SUPERFAMILY SSF51971 386 479 2.12E-8 T 21-04-2016 VFU_RS14100 0b2a2a57f5fd7891f8825e0692dba85d 489 Gene3D G3DSA:1.10.1060.10 3 147 1.5E-38 T 21-04-2016 VFU_RS09515 c9599347964da87389a16daf3c6b3e8c 295 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 97 267 3.4E-17 T 21-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 VFU_RS09515 c9599347964da87389a16daf3c6b3e8c 295 PANTHER PTHR22931 108 262 2.6E-34 T 21-04-2016 VFU_RS09515 c9599347964da87389a16daf3c6b3e8c 295 PANTHER PTHR22931:SF7 108 262 2.6E-34 T 21-04-2016 VFU_RS09515 c9599347964da87389a16daf3c6b3e8c 295 Gene3D G3DSA:3.20.20.60 74 284 1.8E-37 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VFU_RS09515 c9599347964da87389a16daf3c6b3e8c 295 SUPERFAMILY SSF51621 101 271 6.28E-32 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VFU_RS09440 ac63abed5b6d73a236cb83a9d77d3763 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 336 1.4E-92 T 21-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 VFU_RS09440 ac63abed5b6d73a236cb83a9d77d3763 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 7.5E-149 T 21-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VFU_RS09440 ac63abed5b6d73a236cb83a9d77d3763 336 Gene3D G3DSA:3.20.20.70 1 336 5.0E-128 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS09440 ac63abed5b6d73a236cb83a9d77d3763 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 21-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 VFU_RS09440 ac63abed5b6d73a236cb83a9d77d3763 336 PANTHER PTHR11938 5 335 9.0E-104 T 21-04-2016 VFU_RS09440 ac63abed5b6d73a236cb83a9d77d3763 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 51.522 T 21-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VFU_RS09440 ac63abed5b6d73a236cb83a9d77d3763 336 PIRSF PIRSF000164 10 336 4.0E-102 T 21-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 VFU_RS09440 ac63abed5b6d73a236cb83a9d77d3763 336 SUPERFAMILY SSF51395 1 336 5.5E-107 T 21-04-2016 VFU_RS09440 ac63abed5b6d73a236cb83a9d77d3763 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 21-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 VFU_RS00460 e7935b01c0b10b9d0cf64703d5457424 297 Gene3D G3DSA:3.30.420.40 131 275 1.4E-44 T 21-04-2016 VFU_RS00460 e7935b01c0b10b9d0cf64703d5457424 297 SUPERFAMILY SSF53067 2 296 1.5E-57 T 21-04-2016 VFU_RS00460 e7935b01c0b10b9d0cf64703d5457424 297 PANTHER PTHR18964:SF134 1 297 1.4E-122 T 21-04-2016 VFU_RS00460 e7935b01c0b10b9d0cf64703d5457424 297 Gene3D G3DSA:3.30.420.40 2 130 2.0E-35 T 21-04-2016 VFU_RS00460 e7935b01c0b10b9d0cf64703d5457424 297 Pfam PF00480 ROK family 3 295 9.5E-72 T 21-04-2016 IPR000600 ROK family VFU_RS00460 e7935b01c0b10b9d0cf64703d5457424 297 ProSitePatterns PS01125 ROK family signature. 129 156 - T 21-04-2016 IPR000600 ROK family VFU_RS00460 e7935b01c0b10b9d0cf64703d5457424 297 PANTHER PTHR18964 1 297 1.4E-122 T 21-04-2016 VFU_RS04830 e6cabeb55f521856d7b5100b8617c05c 494 PANTHER PTHR30252:SF0 1 470 1.1E-171 T 21-04-2016 VFU_RS04830 e6cabeb55f521856d7b5100b8617c05c 494 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 328 437 1.0E-21 T 21-04-2016 IPR025299 CstA, C-terminal domain VFU_RS04830 e6cabeb55f521856d7b5100b8617c05c 494 PANTHER PTHR30252 1 470 1.1E-171 T 21-04-2016 VFU_RS04830 e6cabeb55f521856d7b5100b8617c05c 494 Pfam PF02554 Carbon starvation protein CstA 5 144 3.1E-32 T 21-04-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 VFU_RS12320 367b892dc21581179e4c79c4484c6fad 352 PANTHER PTHR30349 89 352 1.2E-29 T 21-04-2016 VFU_RS12320 367b892dc21581179e4c79c4484c6fad 352 Pfam PF00589 Phage integrase family 177 324 4.2E-16 T 21-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VFU_RS12320 367b892dc21581179e4c79c4484c6fad 352 PANTHER PTHR30349:SF20 89 352 1.2E-29 T 21-04-2016 VFU_RS12320 367b892dc21581179e4c79c4484c6fad 352 SUPERFAMILY SSF56349 65 332 1.38E-38 T 21-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VFU_RS12320 367b892dc21581179e4c79c4484c6fad 352 Gene3D G3DSA:1.10.443.10 174 334 2.4E-32 T 21-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VFU_RS14215 356268159e1f0d57d395446fa741a9ac 420 Gene3D G3DSA:3.30.1490.110 100 166 1.2E-13 T 21-04-2016 VFU_RS14215 356268159e1f0d57d395446fa741a9ac 420 PIRSF PIRSF003101 1 420 8.1E-148 T 21-04-2016 IPR020823 Cell division protein FtsA GO:0007049 VFU_RS14215 356268159e1f0d57d395446fa741a9ac 420 Gene3D G3DSA:3.30.420.40 3 83 1.2E-22 T 21-04-2016 VFU_RS14215 356268159e1f0d57d395446fa741a9ac 420 Gene3D G3DSA:3.30.420.40 168 208 1.2E-22 T 21-04-2016 VFU_RS14215 356268159e1f0d57d395446fa741a9ac 420 Gene3D G3DSA:3.30.420.40 298 359 1.6E-26 T 21-04-2016 VFU_RS14215 356268159e1f0d57d395446fa741a9ac 420 Gene3D G3DSA:3.30.420.40 209 234 1.6E-26 T 21-04-2016 VFU_RS14215 356268159e1f0d57d395446fa741a9ac 420 Pfam PF14450 Cell division protein FtsA 207 381 1.8E-24 T 21-04-2016 VFU_RS14215 356268159e1f0d57d395446fa741a9ac 420 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 2.6E-28 T 21-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 VFU_RS14215 356268159e1f0d57d395446fa741a9ac 420 SMART SM00842 10 196 3.8E-96 T 21-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 VFU_RS14215 356268159e1f0d57d395446fa741a9ac 420 SUPERFAMILY SSF53067 8 221 1.2E-59 T 21-04-2016 VFU_RS14215 356268159e1f0d57d395446fa741a9ac 420 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 2.1E-151 T 21-04-2016 IPR020823 Cell division protein FtsA GO:0007049 VFU_RS14215 356268159e1f0d57d395446fa741a9ac 420 PANTHER PTHR32432 1 406 1.7E-166 T 21-04-2016 VFU_RS14215 356268159e1f0d57d395446fa741a9ac 420 Gene3D G3DSA:3.90.640.10 235 297 2.3E-19 T 21-04-2016 VFU_RS14215 356268159e1f0d57d395446fa741a9ac 420 PANTHER PTHR32432:SF4 1 406 1.7E-166 T 21-04-2016 VFU_RS14215 356268159e1f0d57d395446fa741a9ac 420 SUPERFAMILY SSF53067 198 384 4.46E-45 T 21-04-2016 VFU_RS14215 356268159e1f0d57d395446fa741a9ac 420 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 420 29.334 T 21-04-2016 IPR020823 Cell division protein FtsA GO:0007049 VFU_RS06215 8864554964fa5aa446188d7daf31bd40 155 SUPERFAMILY SSF53254 1 144 4.93E-20 T 21-04-2016 IPR029033 Histidine phosphatase superfamily VFU_RS06215 8864554964fa5aa446188d7daf31bd40 155 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 155 1.5E-36 T 21-04-2016 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0008969 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- VFU_RS06215 8864554964fa5aa446188d7daf31bd40 155 Gene3D G3DSA:3.40.50.1240 1 155 1.6E-35 T 21-04-2016 IPR029033 Histidine phosphatase superfamily VFU_RS06215 8864554964fa5aa446188d7daf31bd40 155 SMART SM00855 2 117 5.3E-6 T 21-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 VFU_RS06215 8864554964fa5aa446188d7daf31bd40 155 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 78 9.6E-8 T 21-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 VFU_RS00025 d3b0553e1b484b405ac4e69d4626c820 118 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 3 118 3.6E-43 T 21-04-2016 IPR017462 Sulphur relay, TusC/DsrF VFU_RS00025 d3b0553e1b484b405ac4e69d4626c820 118 PANTHER PTHR38780 1 118 3.0E-49 T 21-04-2016 VFU_RS00025 d3b0553e1b484b405ac4e69d4626c820 118 SUPERFAMILY SSF75169 1 118 2.69E-32 T 21-04-2016 IPR027396 DsrEFH-like VFU_RS00025 d3b0553e1b484b405ac4e69d4626c820 118 PANTHER PTHR38780:SF1 1 118 3.0E-49 T 21-04-2016 VFU_RS00025 d3b0553e1b484b405ac4e69d4626c820 118 Pfam PF02635 DsrE/DsrF-like family 2 118 7.1E-22 T 21-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein VFU_RS00025 d3b0553e1b484b405ac4e69d4626c820 118 Gene3D G3DSA:3.40.1260.10 2 118 1.2E-41 T 21-04-2016 IPR027396 DsrEFH-like VFU_RS13810 76dab1fe1b70192571d74651125d0bca 483 Gene3D G3DSA:3.30.1490.20 283 356 7.0E-12 T 21-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VFU_RS13810 76dab1fe1b70192571d74651125d0bca 483 Gene3D G3DSA:3.40.50.20 208 275 1.7E-10 T 21-04-2016 IPR016185 Pre-ATP-grasp domain VFU_RS13810 76dab1fe1b70192571d74651125d0bca 483 Pfam PF08443 RimK-like ATP-grasp domain 277 455 3.1E-12 T 21-04-2016 IPR013651 ATP-grasp fold, RimK-type VFU_RS13810 76dab1fe1b70192571d74651125d0bca 483 Gene3D G3DSA:3.30.470.20 276 282 2.6E-5 T 21-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VFU_RS13810 76dab1fe1b70192571d74651125d0bca 483 Gene3D G3DSA:3.30.470.20 357 454 2.6E-5 T 21-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VFU_RS13810 76dab1fe1b70192571d74651125d0bca 483 PANTHER PTHR11609:SF4 154 481 5.1E-143 T 21-04-2016 VFU_RS13810 76dab1fe1b70192571d74651125d0bca 483 Pfam PF14401 RimK-like ATPgrasp N-terminal domain 27 167 3.1E-45 T 21-04-2016 IPR025839 RimK-like ATPgrasp N-terminal domain VFU_RS13810 76dab1fe1b70192571d74651125d0bca 483 PANTHER PTHR11609 154 481 5.1E-143 T 21-04-2016 VFU_RS13810 76dab1fe1b70192571d74651125d0bca 483 SUPERFAMILY SSF56059 268 476 2.47E-41 T 21-04-2016 VFU_RS10685 6631b052a153ed3c48c1a40c85cf014e 127 Gene3D G3DSA:3.30.70.260 70 107 0.001 T 21-04-2016 VFU_RS10685 6631b052a153ed3c48c1a40c85cf014e 127 SUPERFAMILY SSF55021 4 67 5.72E-6 T 21-04-2016 VFU_RS03965 1e930679e8886350f508f1d0e91fc333 363 SMART SM01329 7 356 2.2E-202 T 21-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 VFU_RS03965 1e930679e8886350f508f1d0e91fc333 363 PANTHER PTHR11835 1 362 8.3E-211 T 21-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 VFU_RS03965 1e930679e8886350f508f1d0e91fc333 363 SUPERFAMILY SSF53659 4 362 3.84E-124 T 21-04-2016 VFU_RS03965 1e930679e8886350f508f1d0e91fc333 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 356 2.3E-137 T 21-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 VFU_RS03965 1e930679e8886350f508f1d0e91fc333 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 6 360 51.286 T 21-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 VFU_RS03965 1e930679e8886350f508f1d0e91fc333 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 248 267 - T 21-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 VFU_RS03965 1e930679e8886350f508f1d0e91fc333 363 PANTHER PTHR11835:SF35 1 362 8.3E-211 T 21-04-2016 VFU_RS03965 1e930679e8886350f508f1d0e91fc333 363 Gene3D G3DSA:3.40.718.10 3 360 1.7E-134 T 21-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 VFU_RS03965 1e930679e8886350f508f1d0e91fc333 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 7 355 4.3E-165 T 21-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 VFU_RS03285 432d0de65b1d9e6770cea65469527334 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 4.1E-95 T 21-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS03285 432d0de65b1d9e6770cea65469527334 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 21-04-2016 IPR019926 Ribosomal protein L3, conserved site VFU_RS03285 432d0de65b1d9e6770cea65469527334 209 PANTHER PTHR11229 1 208 2.6E-126 T 21-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS03285 432d0de65b1d9e6770cea65469527334 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 41.273 T 21-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS03285 432d0de65b1d9e6770cea65469527334 209 Pfam PF00297 Ribosomal protein L3 94 182 1.3E-16 T 21-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS03285 432d0de65b1d9e6770cea65469527334 209 SUPERFAMILY SSF50447 1 208 1.5E-84 T 21-04-2016 IPR009000 Translation protein, beta-barrel domain VFU_RS03285 432d0de65b1d9e6770cea65469527334 209 Gene3D G3DSA:2.40.30.10 3 32 8.2E-11 T 21-04-2016 VFU_RS03285 432d0de65b1d9e6770cea65469527334 209 Gene3D G3DSA:2.40.30.10 158 207 8.2E-11 T 21-04-2016 VFU_RS03285 432d0de65b1d9e6770cea65469527334 209 Gene3D G3DSA:4.10.960.10 77 157 8.9E-39 T 21-04-2016 VFU_RS01210 757e433791d51a1bc1f8c3d9cea30f7c 279 Gene3D G3DSA:3.40.50.150 1 279 8.0E-117 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS01210 757e433791d51a1bc1f8c3d9cea30f7c 279 SUPERFAMILY SSF53335 9 275 1.2E-96 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS01210 757e433791d51a1bc1f8c3d9cea30f7c 279 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 41.482 T 21-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 VFU_RS01210 757e433791d51a1bc1f8c3d9cea30f7c 279 PANTHER PTHR37426 2 279 2.8E-160 T 21-04-2016 VFU_RS01210 757e433791d51a1bc1f8c3d9cea30f7c 279 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 277 2.2E-117 T 21-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 VFU_RS01210 757e433791d51a1bc1f8c3d9cea30f7c 279 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 161 167 - T 21-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VFU_RS01210 757e433791d51a1bc1f8c3d9cea30f7c 279 PANTHER PTHR37426:SF1 2 279 2.8E-160 T 21-04-2016 VFU_RS01210 757e433791d51a1bc1f8c3d9cea30f7c 279 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 241 247 - T 21-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VFU_RS00820 16b4b77e9b34a8cb43c6830ab0f9ee9f 278 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 1.7E-27 T 21-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 VFU_RS00820 16b4b77e9b34a8cb43c6830ab0f9ee9f 278 PANTHER PTHR22993:SF15 1 269 1.2E-129 T 21-04-2016 VFU_RS00820 16b4b77e9b34a8cb43c6830ab0f9ee9f 278 Pfam PF06827 Zinc finger found in FPG and IleRS 241 270 1.0E-10 T 21-04-2016 IPR010663 Zinc finger, FPG/IleRS-type VFU_RS00820 16b4b77e9b34a8cb43c6830ab0f9ee9f 278 SUPERFAMILY SSF81624 2 138 6.8E-40 T 21-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 VFU_RS00820 16b4b77e9b34a8cb43c6830ab0f9ee9f 278 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 4.9E-96 T 21-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 VFU_RS00820 16b4b77e9b34a8cb43c6830ab0f9ee9f 278 SUPERFAMILY SSF46946 130 221 1.44E-30 T 21-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 VFU_RS00820 16b4b77e9b34a8cb43c6830ab0f9ee9f 278 SMART SM00898 2 115 1.8E-51 T 21-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 VFU_RS00820 16b4b77e9b34a8cb43c6830ab0f9ee9f 278 Gene3D G3DSA:3.20.190.10 2 129 5.0E-37 T 21-04-2016 VFU_RS00820 16b4b77e9b34a8cb43c6830ab0f9ee9f 278 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 21-04-2016 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 VFU_RS00820 16b4b77e9b34a8cb43c6830ab0f9ee9f 278 Gene3D G3DSA:1.10.8.50 130 269 1.8E-52 T 21-04-2016 VFU_RS00820 16b4b77e9b34a8cb43c6830ab0f9ee9f 278 PANTHER PTHR22993 1 269 1.2E-129 T 21-04-2016 VFU_RS00820 16b4b77e9b34a8cb43c6830ab0f9ee9f 278 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 43.672 T 21-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 VFU_RS00820 16b4b77e9b34a8cb43c6830ab0f9ee9f 278 SMART SM01232 129 221 4.8E-47 T 21-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 VFU_RS00820 16b4b77e9b34a8cb43c6830ab0f9ee9f 278 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 2.8E-31 T 21-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 VFU_RS00820 16b4b77e9b34a8cb43c6830ab0f9ee9f 278 SUPERFAMILY SSF57716 217 269 1.23E-17 T 21-04-2016 VFU_RS01720 2570bb2b329cae96c13337ffa07db2ff 92 PANTHER PTHR33941 1 87 4.8E-38 T 21-04-2016 VFU_RS01720 2570bb2b329cae96c13337ffa07db2ff 92 Pfam PF00936 BMC domain 4 79 6.8E-28 T 21-04-2016 IPR000249 Microcompartment protein, bacteria VFU_RS01720 2570bb2b329cae96c13337ffa07db2ff 92 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 21 40 - T 21-04-2016 IPR020808 Bacterial microcompartments protein, conserved site VFU_RS01720 2570bb2b329cae96c13337ffa07db2ff 92 SMART SM00877 3 79 6.8E-35 T 21-04-2016 IPR000249 Microcompartment protein, bacteria VFU_RS01720 2570bb2b329cae96c13337ffa07db2ff 92 SUPERFAMILY SSF143414 3 89 9.94E-31 T 21-04-2016 VFU_RS01720 2570bb2b329cae96c13337ffa07db2ff 92 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 3 45 1.0E-16 T 21-04-2016 VFU_RS05215 6e2f9a518a1b62cc73626325b4c47ef3 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 5.2E-55 T 21-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VFU_RS05215 6e2f9a518a1b62cc73626325b4c47ef3 156 Gene3D G3DSA:3.40.50.960 3 154 1.1E-63 T 21-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VFU_RS05215 6e2f9a518a1b62cc73626325b4c47ef3 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 5.1E-54 T 21-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VFU_RS05215 6e2f9a518a1b62cc73626325b4c47ef3 156 SUPERFAMILY SSF52121 4 154 6.15E-59 T 21-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VFU_RS05215 6e2f9a518a1b62cc73626325b4c47ef3 156 PANTHER PTHR21058 1 155 1.3E-76 T 21-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VFU_RS05215 6e2f9a518a1b62cc73626325b4c47ef3 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 30.929 T 21-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VFU_RS03390 2af904cf177250b2aa43de70f09cd87f 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 21-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 VFU_RS03390 2af904cf177250b2aa43de70f09cd87f 118 PANTHER PTHR10871 2 118 1.0E-67 T 21-04-2016 VFU_RS03390 2af904cf177250b2aa43de70f09cd87f 118 SUPERFAMILY SSF46946 2 114 6.77E-45 T 21-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 VFU_RS03390 2af904cf177250b2aa43de70f09cd87f 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 3.7E-53 T 21-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS03390 2af904cf177250b2aa43de70f09cd87f 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 9.9E-32 T 21-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS03390 2af904cf177250b2aa43de70f09cd87f 118 Gene3D G3DSA:1.10.8.50 2 71 3.9E-27 T 21-04-2016 VFU_RS03390 2af904cf177250b2aa43de70f09cd87f 118 Gene3D G3DSA:4.10.910.10 72 118 3.5E-27 T 21-04-2016 IPR027437 30s ribosomal protein S13, C-terminal VFU_RS03390 2af904cf177250b2aa43de70f09cd87f 118 PIRSF PIRSF002134 1 118 1.1E-40 T 21-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS03390 2af904cf177250b2aa43de70f09cd87f 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 25.371 T 21-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS02540 6723ffa06a51540ec35f282c653783e8 144 PANTHER PTHR10472 2 143 3.4E-68 T 21-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 VFU_RS02540 6723ffa06a51540ec35f282c653783e8 144 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 142 7.0E-50 T 21-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 VFU_RS02540 6723ffa06a51540ec35f282c653783e8 144 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 2 144 9.5E-62 T 21-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 VFU_RS02540 6723ffa06a51540ec35f282c653783e8 144 Gene3D G3DSA:3.50.80.10 3 143 1.0E-52 T 21-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain VFU_RS02540 6723ffa06a51540ec35f282c653783e8 144 SUPERFAMILY SSF69500 2 143 2.62E-53 T 21-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain VFU_RS02540 6723ffa06a51540ec35f282c653783e8 144 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 144 33.181 T 21-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 VFU_RS03755 1ad64d22ff368f75d9b8c831c7aa1fb5 356 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 354 2.1E-133 T 21-04-2016 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 VFU_RS03755 1ad64d22ff368f75d9b8c831c7aa1fb5 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 354 2.6E-71 T 21-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 VFU_RS03755 1ad64d22ff368f75d9b8c831c7aa1fb5 356 PANTHER PTHR33529:SF1 1 355 9.7E-153 T 21-04-2016 VFU_RS03755 1ad64d22ff368f75d9b8c831c7aa1fb5 356 PANTHER PTHR33529 1 355 9.7E-153 T 21-04-2016 VFU_RS10415 8b7aee9e2fe7b0f766ad066dc49d914b 795 SUPERFAMILY SSF56037 195 394 1.57E-77 T 21-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 VFU_RS10415 8b7aee9e2fe7b0f766ad066dc49d914b 795 SMART SM00896 701 794 1.8E-44 T 21-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 VFU_RS10415 8b7aee9e2fe7b0f766ad066dc49d914b 795 Gene3D G3DSA:3.30.930.10 493 689 9.6E-68 T 21-04-2016 VFU_RS10415 8b7aee9e2fe7b0f766ad066dc49d914b 795 Pfam PF01588 Putative tRNA binding domain 45 145 2.9E-26 T 21-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 VFU_RS10415 8b7aee9e2fe7b0f766ad066dc49d914b 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 5.7E-281 T 21-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 VFU_RS10415 8b7aee9e2fe7b0f766ad066dc49d914b 795 SMART SM00874 403 471 1.7E-29 T 21-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 VFU_RS10415 8b7aee9e2fe7b0f766ad066dc49d914b 795 Gene3D G3DSA:2.40.50.140 42 153 2.4E-44 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS10415 8b7aee9e2fe7b0f766ad066dc49d914b 795 Gene3D G3DSA:3.30.56.10 1 38 2.1E-25 T 21-04-2016 VFU_RS10415 8b7aee9e2fe7b0f766ad066dc49d914b 795 Gene3D G3DSA:3.30.56.10 155 184 2.1E-25 T 21-04-2016 VFU_RS10415 8b7aee9e2fe7b0f766ad066dc49d914b 795 SUPERFAMILY SSF46955 403 475 8.97E-20 T 21-04-2016 IPR009061 Putative DNA-binding domain VFU_RS10415 8b7aee9e2fe7b0f766ad066dc49d914b 795 SUPERFAMILY SSF55681 467 689 2.39E-54 T 21-04-2016 VFU_RS10415 8b7aee9e2fe7b0f766ad066dc49d914b 795 Gene3D G3DSA:3.30.56.20 402 475 9.7E-27 T 21-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 VFU_RS10415 8b7aee9e2fe7b0f766ad066dc49d914b 795 SMART SM00873 212 385 4.6E-100 T 21-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 VFU_RS10415 8b7aee9e2fe7b0f766ad066dc49d914b 795 Pfam PF03484 tRNA synthetase B5 domain 406 471 6.7E-18 T 21-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 VFU_RS10415 8b7aee9e2fe7b0f766ad066dc49d914b 795 PANTHER PTHR10947:SF0 2 794 0.0 T 21-04-2016 VFU_RS10415 8b7aee9e2fe7b0f766ad066dc49d914b 795 PANTHER PTHR10947 2 794 0.0 T 21-04-2016 VFU_RS10415 8b7aee9e2fe7b0f766ad066dc49d914b 795 Gene3D G3DSA:3.30.70.380 703 794 3.2E-30 T 21-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 VFU_RS10415 8b7aee9e2fe7b0f766ad066dc49d914b 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 47.192 T 21-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 VFU_RS10415 8b7aee9e2fe7b0f766ad066dc49d914b 795 SUPERFAMILY SSF54991 697 794 2.22E-29 T 21-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 VFU_RS10415 8b7aee9e2fe7b0f766ad066dc49d914b 795 Gene3D G3DSA:3.50.40.10 198 392 7.6E-86 T 21-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 VFU_RS10415 8b7aee9e2fe7b0f766ad066dc49d914b 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 6.0E-29 T 21-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 VFU_RS10415 8b7aee9e2fe7b0f766ad066dc49d914b 795 SUPERFAMILY SSF50249 38 196 3.67E-47 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS10415 8b7aee9e2fe7b0f766ad066dc49d914b 795 Pfam PF03483 B3/4 domain 212 385 2.2E-72 T 21-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 VFU_RS12485 091e7ceed1e4daf88d69a412260e7e7a 81 Pfam PF02597 ThiS family 4 81 4.6E-23 T 21-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 VFU_RS12485 091e7ceed1e4daf88d69a412260e7e7a 81 SUPERFAMILY SSF54285 1 81 2.18E-23 T 21-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VFU_RS12485 091e7ceed1e4daf88d69a412260e7e7a 81 PANTHER PTHR33359 1 81 1.1E-26 T 21-04-2016 VFU_RS12485 091e7ceed1e4daf88d69a412260e7e7a 81 Gene3D G3DSA:3.10.20.30 1 81 2.6E-25 T 21-04-2016 IPR012675 Beta-grasp domain VFU_RS12485 091e7ceed1e4daf88d69a412260e7e7a 81 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 81 3.2E-22 T 21-04-2016 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 UniPathway: UPA00344 VFU_RS10420 e18615f26770b9032c64a5e9a17adc63 327 PANTHER PTHR11538 92 327 3.8E-117 T 21-04-2016 VFU_RS10420 e18615f26770b9032c64a5e9a17adc63 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 2.9E-107 T 21-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 VFU_RS10420 e18615f26770b9032c64a5e9a17adc63 327 Gene3D G3DSA:3.30.930.10 10 327 2.5E-135 T 21-04-2016 VFU_RS10420 e18615f26770b9032c64a5e9a17adc63 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 327 1.4E-114 T 21-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 VFU_RS10420 e18615f26770b9032c64a5e9a17adc63 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 49.473 T 21-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 VFU_RS10420 e18615f26770b9032c64a5e9a17adc63 327 SUPERFAMILY SSF55681 92 327 9.03E-83 T 21-04-2016 VFU_RS10420 e18615f26770b9032c64a5e9a17adc63 327 SUPERFAMILY SSF46589 13 99 1.36E-22 T 21-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 VFU_RS10420 e18615f26770b9032c64a5e9a17adc63 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 2.3E-25 T 21-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 VFU_RS08690 5524d5cc14629ebcd16477e624b334b8 395 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 374 1.3E-51 T 21-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 VFU_RS08690 5524d5cc14629ebcd16477e624b334b8 395 SUPERFAMILY SSF111369 52 265 9.68E-26 T 21-04-2016 VFU_RS08690 5524d5cc14629ebcd16477e624b334b8 395 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 49 264 4.4E-18 T 21-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VFU_RS08690 5524d5cc14629ebcd16477e624b334b8 395 PANTHER PTHR30572:SF3 1 376 1.2E-135 T 21-04-2016 VFU_RS08690 5524d5cc14629ebcd16477e624b334b8 395 PANTHER PTHR30572 1 376 1.2E-135 T 21-04-2016 VFU_RS08690 5524d5cc14629ebcd16477e624b334b8 395 Gene3D G3DSA:2.40.50.100 62 94 2.0E-19 T 21-04-2016 VFU_RS08690 5524d5cc14629ebcd16477e624b334b8 395 Gene3D G3DSA:2.40.50.100 183 215 2.0E-19 T 21-04-2016 VFU_RS11870 30fc9893827d707edf41c69f7119ad56 637 PANTHER PTHR33121 359 629 1.3E-60 T 21-04-2016 VFU_RS11870 30fc9893827d707edf41c69f7119ad56 637 Pfam PF00990 Diguanylate cyclase, GGDEF domain 197 352 5.6E-24 T 21-04-2016 IPR000160 GGDEF domain VFU_RS11870 30fc9893827d707edf41c69f7119ad56 637 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 194 358 9.2E-22 T 21-04-2016 IPR000160 GGDEF domain VFU_RS11870 30fc9893827d707edf41c69f7119ad56 637 Gene3D G3DSA:3.20.20.450 381 623 3.8E-71 T 21-04-2016 IPR001633 EAL domain VFU_RS11870 30fc9893827d707edf41c69f7119ad56 637 Gene3D G3DSA:3.30.70.270 199 365 4.4E-30 T 21-04-2016 VFU_RS11870 30fc9893827d707edf41c69f7119ad56 637 SUPERFAMILY SSF55073 202 362 2.12E-24 T 21-04-2016 IPR029787 Nucleotide cyclase VFU_RS11870 30fc9893827d707edf41c69f7119ad56 637 SMART SM00267 186 360 1.1E-16 T 21-04-2016 IPR000160 GGDEF domain VFU_RS11870 30fc9893827d707edf41c69f7119ad56 637 PANTHER PTHR33121:SF13 359 629 1.3E-60 T 21-04-2016 VFU_RS11870 30fc9893827d707edf41c69f7119ad56 637 SUPERFAMILY SSF141868 381 625 1.57E-67 T 21-04-2016 IPR001633 EAL domain VFU_RS11870 30fc9893827d707edf41c69f7119ad56 637 SMART SM00052 373 617 4.5E-76 T 21-04-2016 IPR001633 EAL domain VFU_RS11870 30fc9893827d707edf41c69f7119ad56 637 Pfam PF00563 EAL domain 382 612 4.6E-62 T 21-04-2016 IPR001633 EAL domain VFU_RS08725 ab838926d6928df957c23c08fb28721e 505 PANTHER PTHR30389 1 502 0.0 T 21-04-2016 VFU_RS08725 ab838926d6928df957c23c08fb28721e 505 PIRSF PIRSF001394 1 505 6.1E-216 T 21-04-2016 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 VFU_RS08725 ab838926d6928df957c23c08fb28721e 505 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 284 3.4E-62 T 21-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 VFU_RS08725 ab838926d6928df957c23c08fb28721e 505 PANTHER PTHR30389:SF1 1 502 0.0 T 21-04-2016 VFU_RS08725 ab838926d6928df957c23c08fb28721e 505 SUPERFAMILY SSF117457 317 489 5.75E-63 T 21-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 VFU_RS08725 ab838926d6928df957c23c08fb28721e 505 Pfam PF05683 Fumarase C-terminus 289 490 3.6E-83 T 21-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 VFU_RS08725 ab838926d6928df957c23c08fb28721e 505 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 326 487 1.4E-49 T 21-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 VFU_RS08725 ab838926d6928df957c23c08fb28721e 505 Gene3D G3DSA:3.20.130.10 303 490 1.7E-73 T 21-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 VFU_RS08725 ab838926d6928df957c23c08fb28721e 505 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 1.3E-97 T 21-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 VFU_RS04550 5326ab808b8f6b79a1d2ff93445e8bd4 483 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 36 435 6.3E-97 T 21-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VFU_RS04550 5326ab808b8f6b79a1d2ff93445e8bd4 483 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 56 442 7.6E-96 T 21-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VFU_RS04550 5326ab808b8f6b79a1d2ff93445e8bd4 483 PANTHER PTHR30023:SF0 34 472 1.0E-94 T 21-04-2016 VFU_RS04550 5326ab808b8f6b79a1d2ff93445e8bd4 483 Gene3D G3DSA:3.40.710.10 221 451 4.2E-54 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VFU_RS04550 5326ab808b8f6b79a1d2ff93445e8bd4 483 SUPERFAMILY SSF56601 34 452 1.69E-79 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VFU_RS04550 5326ab808b8f6b79a1d2ff93445e8bd4 483 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 283 305 3.9E-25 T 21-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VFU_RS04550 5326ab808b8f6b79a1d2ff93445e8bd4 483 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 421 434 3.9E-25 T 21-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VFU_RS04550 5326ab808b8f6b79a1d2ff93445e8bd4 483 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 342 356 3.9E-25 T 21-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VFU_RS04550 5326ab808b8f6b79a1d2ff93445e8bd4 483 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 357 371 3.9E-25 T 21-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VFU_RS04550 5326ab808b8f6b79a1d2ff93445e8bd4 483 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 62 81 3.9E-25 T 21-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VFU_RS04550 5326ab808b8f6b79a1d2ff93445e8bd4 483 PANTHER PTHR30023 34 472 1.0E-94 T 21-04-2016 VFU_RS02100 8e8cfd85d66af634e655915b691c6f9f 276 PANTHER PTHR33525 1 230 3.9E-45 T 21-04-2016 VFU_RS02100 8e8cfd85d66af634e655915b691c6f9f 276 SUPERFAMILY SSF109604 5 250 8.17E-55 T 21-04-2016 VFU_RS02100 8e8cfd85d66af634e655915b691c6f9f 276 Pfam PF08668 HDOD domain 13 206 2.5E-48 T 21-04-2016 IPR013976 Metal-dependent hydrolase HDOD VFU_RS02100 8e8cfd85d66af634e655915b691c6f9f 276 Gene3D G3DSA:1.10.3150.10 4 257 3.3E-61 T 21-04-2016 IPR013976 Metal-dependent hydrolase HDOD VFU_RS02100 8e8cfd85d66af634e655915b691c6f9f 276 PANTHER PTHR33525:SF3 1 230 3.9E-45 T 21-04-2016 VFU_RS14765 72d48073ad3f87177f65e49e69aaeabb 287 Pfam PF00924 Mechanosensitive ion channel 77 274 9.0E-58 T 21-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VFU_RS14765 72d48073ad3f87177f65e49e69aaeabb 287 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 149 183 - T 21-04-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 VFU_RS14765 72d48073ad3f87177f65e49e69aaeabb 287 SUPERFAMILY SSF82861 33 118 2.88E-17 T 21-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 VFU_RS14765 72d48073ad3f87177f65e49e69aaeabb 287 Gene3D G3DSA:3.30.70.100 188 272 1.7E-31 T 21-04-2016 VFU_RS14765 72d48073ad3f87177f65e49e69aaeabb 287 SUPERFAMILY SSF50182 120 185 7.85E-17 T 21-04-2016 IPR010920 LSM domain VFU_RS14765 72d48073ad3f87177f65e49e69aaeabb 287 Pfam PF05552 Conserved TM helix 21 69 2.1E-11 T 21-04-2016 IPR008910 Conserved TM helix VFU_RS14765 72d48073ad3f87177f65e49e69aaeabb 287 PANTHER PTHR30221:SF7 17 285 8.8E-114 T 21-04-2016 VFU_RS14765 72d48073ad3f87177f65e49e69aaeabb 287 Gene3D G3DSA:2.30.30.60 135 184 9.3E-19 T 21-04-2016 VFU_RS14765 72d48073ad3f87177f65e49e69aaeabb 287 SUPERFAMILY SSF82689 187 284 6.28E-35 T 21-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 VFU_RS14765 72d48073ad3f87177f65e49e69aaeabb 287 PANTHER PTHR30221 17 285 8.8E-114 T 21-04-2016 VFU_RS12690 faa045304cc13332d95bcda1dd6afbe5 173 ProDom PD016359 TRANSMEMBRANE TOXS REGULATORY MEMBRANE PERIPLASMIC 1 172 3.0E-65 T 21-04-2016 VFU_RS01055 f364b4652430bdded447aaff01556987 117 SUPERFAMILY SSF49503 15 116 9.75E-17 T 21-04-2016 IPR008972 Cupredoxin VFU_RS01055 f364b4652430bdded447aaff01556987 117 Gene3D G3DSA:2.60.40.420 23 114 6.3E-9 T 21-04-2016 IPR008972 Cupredoxin VFU_RS01055 f364b4652430bdded447aaff01556987 117 Pfam PF13473 Cupredoxin-like domain 11 114 1.3E-29 T 21-04-2016 IPR028096 EfeO-type cupredoxin-like domain VFU_RS12860 f605636a02267dea47ae7a9cf2e0c86a 156 SUPERFAMILY SSF75217 2 154 2.51E-50 T 21-04-2016 IPR029028 Alpha/beta knot methyltransferases VFU_RS12860 f605636a02267dea47ae7a9cf2e0c86a 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 27.549 T 21-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VFU_RS12860 f605636a02267dea47ae7a9cf2e0c86a 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 1 156 9.7E-78 T 21-04-2016 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VFU_RS12860 f605636a02267dea47ae7a9cf2e0c86a 156 Pfam PF02590 Predicted SPOUT methyltransferase 2 154 2.9E-49 T 21-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VFU_RS12860 f605636a02267dea47ae7a9cf2e0c86a 156 PIRSF PIRSF004505 1 155 1.8E-44 T 21-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VFU_RS12860 f605636a02267dea47ae7a9cf2e0c86a 156 PANTHER PTHR33603 1 155 2.2E-72 T 21-04-2016 VFU_RS12860 f605636a02267dea47ae7a9cf2e0c86a 156 PANTHER PTHR33603:SF1 1 155 2.2E-72 T 21-04-2016 VFU_RS12860 f605636a02267dea47ae7a9cf2e0c86a 156 Gene3D G3DSA:3.40.1280.10 2 155 2.3E-55 T 21-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VFU_RS08695 64c0ee496984a3614a14e3b32b00f6b6 453 PANTHER PTHR30182:SF5 1 453 0.0 T 21-04-2016 VFU_RS08695 64c0ee496984a3614a14e3b32b00f6b6 453 Pfam PF03315 Serine dehydratase beta chain 3 155 3.8E-54 T 21-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 VFU_RS08695 64c0ee496984a3614a14e3b32b00f6b6 453 Gene3D G3DSA:3.30.1330.90 10 157 5.8E-52 T 21-04-2016 IPR029009 Allosteric substrate binding domain VFU_RS08695 64c0ee496984a3614a14e3b32b00f6b6 453 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 1.6E-226 T 21-04-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 VFU_RS08695 64c0ee496984a3614a14e3b32b00f6b6 453 Pfam PF03313 Serine dehydratase alpha chain 184 448 7.0E-98 T 21-04-2016 IPR005130 Serine dehydratase-like, alpha subunit VFU_RS08695 64c0ee496984a3614a14e3b32b00f6b6 453 SUPERFAMILY SSF143548 16 157 7.06E-44 T 21-04-2016 IPR029009 Allosteric substrate binding domain VFU_RS08695 64c0ee496984a3614a14e3b32b00f6b6 453 PANTHER PTHR30182 1 453 0.0 T 21-04-2016 VFU_RS03295 63362a05b0ad8e4bfe385f32feb71e5e 100 Pfam PF00276 Ribosomal protein L23 9 95 1.3E-31 T 21-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 VFU_RS03295 63362a05b0ad8e4bfe385f32feb71e5e 100 PANTHER PTHR11620 9 95 1.9E-34 T 21-04-2016 VFU_RS03295 63362a05b0ad8e4bfe385f32feb71e5e 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 21-04-2016 IPR001014 Ribosomal protein L23/L25, conserved site VFU_RS03295 63362a05b0ad8e4bfe385f32feb71e5e 100 Gene3D G3DSA:3.30.70.330 6 98 7.4E-36 T 21-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 VFU_RS03295 63362a05b0ad8e4bfe385f32feb71e5e 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.67 T 21-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 VFU_RS03295 63362a05b0ad8e4bfe385f32feb71e5e 100 SUPERFAMILY SSF54189 6 97 4.68E-32 T 21-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS01815 ac1e13778ca3f3d04fbfbc4e74f9300a 245 SUPERFAMILY SSF161098 41 227 5.36E-47 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS01815 ac1e13778ca3f3d04fbfbc4e74f9300a 245 Gene3D G3DSA:1.10.3720.10 41 241 5.6E-50 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS01815 ac1e13778ca3f3d04fbfbc4e74f9300a 245 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 38 136 4.5E-29 T 21-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 VFU_RS01815 ac1e13778ca3f3d04fbfbc4e74f9300a 245 PANTHER PTHR30614 37 245 5.2E-81 T 21-04-2016 VFU_RS01815 ac1e13778ca3f3d04fbfbc4e74f9300a 245 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 60 241 9.4E-27 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS06940 3d3c642366ce1c4bc60f2c016e64beb9 697 PANTHER PTHR30161:SF1 1 695 0.0 T 21-04-2016 VFU_RS06940 3d3c642366ce1c4bc60f2c016e64beb9 697 PANTHER PTHR30161 1 695 0.0 T 21-04-2016 VFU_RS06940 3d3c642366ce1c4bc60f2c016e64beb9 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 185 202 6.0E-55 T 21-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VFU_RS06940 3d3c642366ce1c4bc60f2c016e64beb9 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 155 173 6.0E-55 T 21-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VFU_RS06940 3d3c642366ce1c4bc60f2c016e64beb9 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 236 250 6.0E-55 T 21-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VFU_RS06940 3d3c642366ce1c4bc60f2c016e64beb9 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 136 152 6.0E-55 T 21-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VFU_RS06940 3d3c642366ce1c4bc60f2c016e64beb9 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 69 88 6.0E-55 T 21-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VFU_RS06940 3d3c642366ce1c4bc60f2c016e64beb9 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 32 45 6.0E-55 T 21-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VFU_RS06940 3d3c642366ce1c4bc60f2c016e64beb9 697 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 141 164 - T 21-04-2016 IPR025505 FHIPEP conserved site VFU_RS06940 3d3c642366ce1c4bc60f2c016e64beb9 697 PIRSF PIRSF005419 2 697 4.6E-220 T 21-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VFU_RS06940 3d3c642366ce1c4bc60f2c016e64beb9 697 Pfam PF00771 FHIPEP family 25 688 3.0E-239 T 21-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VFU_RS10435 95e9eaa279d1401eea8a3e11b70a53a5 382 SUPERFAMILY SSF55073 211 366 1.57E-45 T 21-04-2016 IPR029787 Nucleotide cyclase VFU_RS10435 95e9eaa279d1401eea8a3e11b70a53a5 382 Gene3D G3DSA:1.20.120.50 1 131 2.1E-29 T 21-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 VFU_RS10435 95e9eaa279d1401eea8a3e11b70a53a5 382 Pfam PF01814 Hemerythrin HHE cation binding domain 13 128 1.2E-9 T 21-04-2016 IPR012312 Haemerythrin-like VFU_RS10435 95e9eaa279d1401eea8a3e11b70a53a5 382 SMART SM00267 195 367 6.5E-53 T 21-04-2016 IPR000160 GGDEF domain VFU_RS10435 95e9eaa279d1401eea8a3e11b70a53a5 382 Pfam PF00990 Diguanylate cyclase, GGDEF domain 207 363 1.2E-42 T 21-04-2016 IPR000160 GGDEF domain VFU_RS10435 95e9eaa279d1401eea8a3e11b70a53a5 382 PANTHER PTHR10799:SF750 7 137 5.2E-24 T 21-04-2016 VFU_RS10435 95e9eaa279d1401eea8a3e11b70a53a5 382 PANTHER PTHR10799:SF750 239 376 5.2E-24 T 21-04-2016 VFU_RS10435 95e9eaa279d1401eea8a3e11b70a53a5 382 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 202 367 7.9E-47 T 21-04-2016 IPR000160 GGDEF domain VFU_RS10435 95e9eaa279d1401eea8a3e11b70a53a5 382 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 5 131 5.3E-30 T 21-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 VFU_RS10435 95e9eaa279d1401eea8a3e11b70a53a5 382 PANTHER PTHR10799 7 137 5.2E-24 T 21-04-2016 VFU_RS10435 95e9eaa279d1401eea8a3e11b70a53a5 382 PANTHER PTHR10799 239 376 5.2E-24 T 21-04-2016 VFU_RS10435 95e9eaa279d1401eea8a3e11b70a53a5 382 SUPERFAMILY SSF47188 1 131 1.7E-26 T 21-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 VFU_RS10435 95e9eaa279d1401eea8a3e11b70a53a5 382 Gene3D G3DSA:3.30.70.270 208 368 6.3E-48 T 21-04-2016 VFU_RS10785 07cd0d827a004b4e575a148161d65eb8 314 PANTHER PTHR10584:SF57 8 307 3.5E-106 T 21-04-2016 VFU_RS10785 07cd0d827a004b4e575a148161d65eb8 314 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 260 273 - T 21-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VFU_RS10785 07cd0d827a004b4e575a148161d65eb8 314 Pfam PF00294 pfkB family carbohydrate kinase 7 308 1.8E-45 T 21-04-2016 IPR011611 Carbohydrate kinase PfkB VFU_RS10785 07cd0d827a004b4e575a148161d65eb8 314 PANTHER PTHR10584 8 307 3.5E-106 T 21-04-2016 VFU_RS10785 07cd0d827a004b4e575a148161d65eb8 314 SUPERFAMILY SSF53613 6 304 1.54E-62 T 21-04-2016 IPR029056 Ribokinase-like VFU_RS10785 07cd0d827a004b4e575a148161d65eb8 314 Gene3D G3DSA:3.40.1190.20 3 309 1.1E-66 T 21-04-2016 IPR029056 Ribokinase-like VFU_RS02380 c2770aacf7f81c028ea0b7aeca55d735 281 SUPERFAMILY SSF144091 96 269 1.19E-39 T 21-04-2016 VFU_RS02380 c2770aacf7f81c028ea0b7aeca55d735 281 PANTHER PTHR22936 1 270 5.8E-81 T 21-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 VFU_RS02380 c2770aacf7f81c028ea0b7aeca55d735 281 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 87 4.7E-32 T 21-04-2016 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 VFU_RS02380 c2770aacf7f81c028ea0b7aeca55d735 281 Pfam PF01694 Rhomboid family 134 269 1.5E-30 T 21-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 VFU_RS02380 c2770aacf7f81c028ea0b7aeca55d735 281 Gene3D G3DSA:1.20.1540.10 98 268 1.6E-32 T 21-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 VFU_RS02380 c2770aacf7f81c028ea0b7aeca55d735 281 PANTHER PTHR22936:SF30 1 270 5.8E-81 T 21-04-2016 VFU_RS02380 c2770aacf7f81c028ea0b7aeca55d735 281 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 3 271 3.3E-119 T 21-04-2016 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 VFU_RS09615 f60434bc79b9f5d3e0216f314f830b1c 105 SUPERFAMILY SSF50022 1 103 6.55E-29 T 21-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 VFU_RS09615 f60434bc79b9f5d3e0216f314f830b1c 105 PANTHER PTHR21496 1 103 6.0E-39 T 21-04-2016 VFU_RS09615 f60434bc79b9f5d3e0216f314f830b1c 105 PANTHER PTHR21496:SF11 1 103 6.0E-39 T 21-04-2016 VFU_RS09615 f60434bc79b9f5d3e0216f314f830b1c 105 Pfam PF00355 Rieske [2Fe-2S] domain 4 89 1.9E-17 T 21-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 VFU_RS09615 f60434bc79b9f5d3e0216f314f830b1c 105 Gene3D G3DSA:2.102.10.10 1 103 1.9E-30 T 21-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 VFU_RS07330 a461fae26a64f4349d14a5078fcad508 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 6.2E-20 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VFU_RS07330 a461fae26a64f4349d14a5078fcad508 334 Gene3D G3DSA:3.40.50.2300 58 166 1.2E-38 T 21-04-2016 VFU_RS07330 a461fae26a64f4349d14a5078fcad508 334 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 60 272 6.6E-36 T 21-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain VFU_RS07330 a461fae26a64f4349d14a5078fcad508 334 SUPERFAMILY SSF47413 1 59 2.39E-17 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VFU_RS07330 a461fae26a64f4349d14a5078fcad508 334 SMART SM00354 1 71 2.7E-34 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VFU_RS07330 a461fae26a64f4349d14a5078fcad508 334 Gene3D G3DSA:1.10.260.40 2 57 5.6E-25 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VFU_RS07330 a461fae26a64f4349d14a5078fcad508 334 PANTHER PTHR30146:SF48 1 332 1.9E-128 T 21-04-2016 VFU_RS07330 a461fae26a64f4349d14a5078fcad508 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 9.2E-6 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VFU_RS07330 a461fae26a64f4349d14a5078fcad508 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 9.2E-6 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VFU_RS07330 a461fae26a64f4349d14a5078fcad508 334 PANTHER PTHR30146 1 332 1.9E-128 T 21-04-2016 VFU_RS07330 a461fae26a64f4349d14a5078fcad508 334 Gene3D G3DSA:3.40.50.2300 167 331 1.3E-49 T 21-04-2016 VFU_RS07330 a461fae26a64f4349d14a5078fcad508 334 SUPERFAMILY SSF53822 61 331 5.34E-72 T 21-04-2016 IPR028082 Periplasmic binding protein-like I VFU_RS03005 2da9a1ca9676bffa8de1e6b468689cb7 120 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 5 116 2.0E-56 T 21-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 VFU_RS03005 2da9a1ca9676bffa8de1e6b468689cb7 120 PIRSF PIRSF000179 1 120 1.6E-57 T 21-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 VFU_RS03005 2da9a1ca9676bffa8de1e6b468689cb7 120 Gene3D G3DSA:1.20.1300.10 2 120 2.2E-54 T 21-04-2016 VFU_RS03005 2da9a1ca9676bffa8de1e6b468689cb7 120 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 2 120 25.027 T 21-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 VFU_RS03005 2da9a1ca9676bffa8de1e6b468689cb7 120 Pfam PF02313 Fumarate reductase subunit D 6 118 1.5E-46 T 21-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 VFU_RS03005 2da9a1ca9676bffa8de1e6b468689cb7 120 SUPERFAMILY SSF81343 2 120 1.5E-51 T 21-04-2016 VFU_RS04495 db9de711253344226cd319704357f862 1130 SMART SM00091 874 939 1.7E-4 T 21-04-2016 IPR000014 PAS domain VFU_RS04495 db9de711253344226cd319704357f862 1130 Gene3D G3DSA:3.30.450.20 234 353 7.9E-5 T 21-04-2016 VFU_RS04495 db9de711253344226cd319704357f862 1130 PANTHER PTHR24423:SF374 3 18 7.8E-140 T 21-04-2016 VFU_RS04495 db9de711253344226cd319704357f862 1130 PANTHER PTHR24423:SF374 371 428 7.8E-140 T 21-04-2016 VFU_RS04495 db9de711253344226cd319704357f862 1130 PANTHER PTHR24423:SF374 457 881 7.8E-140 T 21-04-2016 VFU_RS04495 db9de711253344226cd319704357f862 1130 PANTHER PTHR24423:SF374 148 214 7.8E-140 T 21-04-2016 VFU_RS04495 db9de711253344226cd319704357f862 1130 PRINTS PR00344 Bacterial sensor protein C-terminal signature 610 624 3.4E-14 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS04495 db9de711253344226cd319704357f862 1130 PRINTS PR00344 Bacterial sensor protein C-terminal signature 628 638 3.4E-14 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS04495 db9de711253344226cd319704357f862 1130 PRINTS PR00344 Bacterial sensor protein C-terminal signature 645 663 3.4E-14 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS04495 db9de711253344226cd319704357f862 1130 PRINTS PR00344 Bacterial sensor protein C-terminal signature 669 682 3.4E-14 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS04495 db9de711253344226cd319704357f862 1130 Pfam PF00672 HAMP domain 358 427 7.7E-16 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS04495 db9de711253344226cd319704357f862 1130 SMART SM00448 723 836 1.1E-44 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS04495 db9de711253344226cd319704357f862 1130 Gene3D G3DSA:3.30.565.10 513 687 2.3E-46 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS04495 db9de711253344226cd319704357f862 1130 Gene3D G3DSA:1.10.287.130 452 512 6.9E-15 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS04495 db9de711253344226cd319704357f862 1130 SMART SM00388 459 527 6.1E-17 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS04495 db9de711253344226cd319704357f862 1130 SUPERFAMILY SSF47384 444 528 1.08E-18 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS04495 db9de711253344226cd319704357f862 1130 PANTHER PTHR24423 3 18 7.8E-140 T 21-04-2016 VFU_RS04495 db9de711253344226cd319704357f862 1130 PANTHER PTHR24423 371 428 7.8E-140 T 21-04-2016 VFU_RS04495 db9de711253344226cd319704357f862 1130 PANTHER PTHR24423 457 881 7.8E-140 T 21-04-2016 VFU_RS04495 db9de711253344226cd319704357f862 1130 PANTHER PTHR24423 148 214 7.8E-140 T 21-04-2016 VFU_RS04495 db9de711253344226cd319704357f862 1130 SUPERFAMILY SSF55785 862 926 5.33E-7 T 21-04-2016 IPR000014 PAS domain VFU_RS04495 db9de711253344226cd319704357f862 1130 SUPERFAMILY SSF158472 378 428 4.32E-11 T 21-04-2016 VFU_RS04495 db9de711253344226cd319704357f862 1130 Gene3D G3DSA:3.30.450.20 869 928 3.1E-8 T 21-04-2016 VFU_RS04495 db9de711253344226cd319704357f862 1130 SMART SM00304 377 430 2.4E-13 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS04495 db9de711253344226cd319704357f862 1130 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 575 683 3.7E-27 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS04495 db9de711253344226cd319704357f862 1130 SUPERFAMILY SSF55874 516 687 1.13E-46 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS04495 db9de711253344226cd319704357f862 1130 SUPERFAMILY SSF52172 718 849 7.97E-41 T 21-04-2016 IPR011006 CheY-like superfamily VFU_RS04495 db9de711253344226cd319704357f862 1130 SMART SM00387 574 685 5.1E-38 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS04495 db9de711253344226cd319704357f862 1130 Pfam PF00512 His Kinase A (phospho-acceptor) domain 460 525 1.0E-14 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS04495 db9de711253344226cd319704357f862 1130 Gene3D G3DSA:3.40.50.2300 722 847 1.1E-41 T 21-04-2016 VFU_RS04495 db9de711253344226cd319704357f862 1130 Pfam PF00072 Response regulator receiver domain 726 836 2.1E-31 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS04495 db9de711253344226cd319704357f862 1130 Pfam PF00989 PAS fold 877 923 6.7E-5 T 21-04-2016 IPR013767 PAS fold GO:0006355 VFU_RS07735 7da3134f86bacc8ae5faa00bdc08cc71 287 Pfam PF01435 Peptidase family M48 79 286 4.3E-40 T 21-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 VFU_RS07735 7da3134f86bacc8ae5faa00bdc08cc71 287 Gene3D G3DSA:3.30.2010.10 73 160 6.2E-33 T 21-04-2016 VFU_RS07735 7da3134f86bacc8ae5faa00bdc08cc71 287 PANTHER PTHR10120:SF19 1 286 4.5E-101 T 21-04-2016 VFU_RS07735 7da3134f86bacc8ae5faa00bdc08cc71 287 PANTHER PTHR10120 1 286 4.5E-101 T 21-04-2016 VFU_RS07735 7da3134f86bacc8ae5faa00bdc08cc71 287 Hamap MF_00188 Protease HtpX [htpX]. 1 287 25.246 T 21-04-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 VFU_RS00740 c8ca11d416c1209344d0b8c888eb5758 328 PANTHER PTHR30606 18 323 1.9E-133 T 21-04-2016 VFU_RS00740 c8ca11d416c1209344d0b8c888eb5758 328 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 19 323 1.6E-112 T 21-04-2016 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24|UniPathway: UPA00030|UniPathway: UPA00360 VFU_RS00740 c8ca11d416c1209344d0b8c888eb5758 328 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 13 319 50.543 T 21-04-2016 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24|UniPathway: UPA00030|UniPathway: UPA00360 VFU_RS00740 c8ca11d416c1209344d0b8c888eb5758 328 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 21 314 3.3E-81 T 21-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VFU_RS00740 c8ca11d416c1209344d0b8c888eb5758 328 PANTHER PTHR30606:SF4 18 323 1.9E-133 T 21-04-2016 VFU_RS00740 c8ca11d416c1209344d0b8c888eb5758 328 PIRSF PIRSF026649 18 323 3.3E-88 T 21-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VFU_RS15170 ed4128c90b0a12c0c8a0ff4294d77cbf 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 4.7E-9 T 21-04-2016 IPR003004 GspF/PilC family VFU_RS15170 ed4128c90b0a12c0c8a0ff4294d77cbf 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 4.7E-9 T 21-04-2016 IPR003004 GspF/PilC family VFU_RS15170 ed4128c90b0a12c0c8a0ff4294d77cbf 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 4.7E-9 T 21-04-2016 IPR003004 GspF/PilC family VFU_RS15170 ed4128c90b0a12c0c8a0ff4294d77cbf 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 4.7E-9 T 21-04-2016 IPR003004 GspF/PilC family VFU_RS15170 ed4128c90b0a12c0c8a0ff4294d77cbf 407 Pfam PF00482 Type II secretion system (T2SS), protein F 274 396 1.5E-27 T 21-04-2016 IPR018076 Type II secretion system F domain VFU_RS15170 ed4128c90b0a12c0c8a0ff4294d77cbf 407 Pfam PF00482 Type II secretion system (T2SS), protein F 71 194 3.4E-28 T 21-04-2016 IPR018076 Type II secretion system F domain VFU_RS15170 ed4128c90b0a12c0c8a0ff4294d77cbf 407 PANTHER PTHR30012:SF4 2 405 3.9E-258 T 21-04-2016 VFU_RS15170 ed4128c90b0a12c0c8a0ff4294d77cbf 407 PANTHER PTHR30012 2 405 3.9E-258 T 21-04-2016 VFU_RS01355 ac17a9fdb81fe25a1ba21e5e1976419b 297 Pfam PF03466 LysR substrate binding domain 88 289 1.7E-35 T 21-04-2016 IPR005119 LysR, substrate-binding VFU_RS01355 ac17a9fdb81fe25a1ba21e5e1976419b 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 4.1E-18 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS01355 ac17a9fdb81fe25a1ba21e5e1976419b 297 PANTHER PTHR30126 1 297 4.4E-175 T 21-04-2016 VFU_RS01355 ac17a9fdb81fe25a1ba21e5e1976419b 297 SUPERFAMILY SSF46785 1 85 1.04E-20 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS01355 ac17a9fdb81fe25a1ba21e5e1976419b 297 Gene3D G3DSA:3.40.190.10 82 198 4.6E-20 T 21-04-2016 VFU_RS01355 ac17a9fdb81fe25a1ba21e5e1976419b 297 SUPERFAMILY SSF53850 89 291 1.19E-30 T 21-04-2016 VFU_RS01355 ac17a9fdb81fe25a1ba21e5e1976419b 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.2E-6 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS01355 ac17a9fdb81fe25a1ba21e5e1976419b 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.2E-6 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS01355 ac17a9fdb81fe25a1ba21e5e1976419b 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.2E-6 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS01355 ac17a9fdb81fe25a1ba21e5e1976419b 297 PANTHER PTHR30126:SF14 1 297 4.4E-175 T 21-04-2016 VFU_RS01355 ac17a9fdb81fe25a1ba21e5e1976419b 297 Gene3D G3DSA:1.10.10.10 1 81 5.2E-25 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS01355 ac17a9fdb81fe25a1ba21e5e1976419b 297 Gene3D G3DSA:3.40.190.10 199 261 4.8E-11 T 21-04-2016 VFU_RS11925 b3b0a3722c438f716a02484fcf084f50 439 PANTHER PTHR11662 4 430 1.1E-221 T 21-04-2016 VFU_RS11925 b3b0a3722c438f716a02484fcf084f50 439 PIRSF PIRSF002808 4 437 4.6E-127 T 21-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 VFU_RS11925 b3b0a3722c438f716a02484fcf084f50 439 Gene3D G3DSA:1.20.1250.20 17 216 1.9E-49 T 21-04-2016 VFU_RS11925 b3b0a3722c438f716a02484fcf084f50 439 PANTHER PTHR11662:SF286 4 430 1.1E-221 T 21-04-2016 VFU_RS11925 b3b0a3722c438f716a02484fcf084f50 439 SUPERFAMILY SSF103473 16 431 6.41E-79 T 21-04-2016 IPR020846 Major facilitator superfamily domain VFU_RS11925 b3b0a3722c438f716a02484fcf084f50 439 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 31 408 7.8E-126 T 21-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 VFU_RS11925 b3b0a3722c438f716a02484fcf084f50 439 Pfam PF07690 Major Facilitator Superfamily 31 391 3.9E-50 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VFU_RS11925 b3b0a3722c438f716a02484fcf084f50 439 Gene3D G3DSA:1.20.1250.20 238 429 4.0E-39 T 21-04-2016 VFU_RS12070 fa18d6cc5f041f401e2aec4257c69994 331 Gene3D G3DSA:3.30.360.10 159 314 4.5E-87 T 21-04-2016 VFU_RS12070 fa18d6cc5f041f401e2aec4257c69994 331 SMART SM00846 3 150 1.6E-96 T 21-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 VFU_RS12070 fa18d6cc5f041f401e2aec4257c69994 331 SUPERFAMILY SSF55347 149 312 6.85E-81 T 21-04-2016 VFU_RS12070 fa18d6cc5f041f401e2aec4257c69994 331 Gene3D G3DSA:3.40.50.720 1 158 1.4E-79 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS12070 fa18d6cc5f041f401e2aec4257c69994 331 SUPERFAMILY SSF51735 3 166 1.49E-68 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS12070 fa18d6cc5f041f401e2aec4257c69994 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 1.9E-137 T 21-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS12070 fa18d6cc5f041f401e2aec4257c69994 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 21-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 VFU_RS12070 fa18d6cc5f041f401e2aec4257c69994 331 PIRSF PIRSF000149 1 331 3.0E-137 T 21-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VFU_RS12070 fa18d6cc5f041f401e2aec4257c69994 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 2.9E-46 T 21-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VFU_RS12070 fa18d6cc5f041f401e2aec4257c69994 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 2.9E-46 T 21-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VFU_RS12070 fa18d6cc5f041f401e2aec4257c69994 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 2.9E-46 T 21-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VFU_RS12070 fa18d6cc5f041f401e2aec4257c69994 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 2.9E-46 T 21-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VFU_RS12070 fa18d6cc5f041f401e2aec4257c69994 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 2.9E-46 T 21-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VFU_RS12070 fa18d6cc5f041f401e2aec4257c69994 331 PANTHER PTHR10836 1 331 1.1E-245 T 21-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VFU_RS12070 fa18d6cc5f041f401e2aec4257c69994 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 150 2.0E-61 T 21-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 VFU_RS12070 fa18d6cc5f041f401e2aec4257c69994 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 1.1E-71 T 21-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 VFU_RS00530 0c8d687e30fbd72e95e91a32bf07643b 530 PANTHER PTHR21666 338 524 9.7E-34 T 21-04-2016 VFU_RS00530 0c8d687e30fbd72e95e91a32bf07643b 530 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 376 404 - T 21-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VFU_RS00530 0c8d687e30fbd72e95e91a32bf07643b 530 Gene3D G3DSA:1.10.530.10 340 525 3.7E-37 T 21-04-2016 VFU_RS00530 0c8d687e30fbd72e95e91a32bf07643b 530 SUPERFAMILY SSF53955 348 477 1.36E-33 T 21-04-2016 IPR023346 Lysozyme-like domain VFU_RS00530 0c8d687e30fbd72e95e91a32bf07643b 530 SUPERFAMILY SSF53955 506 525 1.36E-33 T 21-04-2016 IPR023346 Lysozyme-like domain VFU_RS00530 0c8d687e30fbd72e95e91a32bf07643b 530 Pfam PF01464 Transglycosylase SLT domain 360 484 1.6E-27 T 21-04-2016 IPR008258 Transglycosylase SLT domain 1 VFU_RS07210 49c4efd4441df82de6f0c9db95277336 302 PANTHER PTHR12715:SF12 22 302 8.7E-65 T 21-04-2016 VFU_RS07210 49c4efd4441df82de6f0c9db95277336 302 Pfam PF00892 EamA-like transporter family 168 301 5.5E-29 T 21-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VFU_RS07210 49c4efd4441df82de6f0c9db95277336 302 Pfam PF00892 EamA-like transporter family 20 152 2.1E-22 T 21-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VFU_RS07210 49c4efd4441df82de6f0c9db95277336 302 SUPERFAMILY SSF103481 202 301 2.62E-15 T 21-04-2016 VFU_RS07210 49c4efd4441df82de6f0c9db95277336 302 SUPERFAMILY SSF103481 53 155 2.22E-14 T 21-04-2016 VFU_RS07210 49c4efd4441df82de6f0c9db95277336 302 PANTHER PTHR12715 22 302 8.7E-65 T 21-04-2016 VFU_RS07175 086df3fe27e7d3957e5d327242f02917 367 Pfam PF03916 Polysulphide reductase, NrfD 10 311 3.5E-18 T 21-04-2016 IPR005614 NrfD family VFU_RS10590 f566ac90de0a22cd3b51f060e75449c8 477 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 23 468 1.9E-206 T 21-04-2016 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 UniPathway: UPA00733 VFU_RS10590 f566ac90de0a22cd3b51f060e75449c8 477 Gene3D G3DSA:3.40.605.10 21 262 5.1E-91 T 21-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 VFU_RS10590 f566ac90de0a22cd3b51f060e75449c8 477 PANTHER PTHR11699:SF49 18 477 2.3E-261 T 21-04-2016 VFU_RS10590 f566ac90de0a22cd3b51f060e75449c8 477 Pfam PF00171 Aldehyde dehydrogenase family 21 468 1.8E-165 T 21-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 VFU_RS10590 f566ac90de0a22cd3b51f060e75449c8 477 Gene3D G3DSA:3.40.309.10 263 445 8.7E-73 T 21-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 VFU_RS10590 f566ac90de0a22cd3b51f060e75449c8 477 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 21-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 VFU_RS10590 f566ac90de0a22cd3b51f060e75449c8 477 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 21-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 VFU_RS10590 f566ac90de0a22cd3b51f060e75449c8 477 PANTHER PTHR11699 18 477 2.3E-261 T 21-04-2016 VFU_RS10590 f566ac90de0a22cd3b51f060e75449c8 477 SUPERFAMILY SSF53720 21 473 9.42E-164 T 21-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 VFU_RS10835 e2aa50374770741d22b51af046aa42fe 476 SUPERFAMILY SSF51366 280 474 5.65E-55 T 21-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 VFU_RS10835 e2aa50374770741d22b51af046aa42fe 476 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 73 91 - T 21-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 VFU_RS10835 e2aa50374770741d22b51af046aa42fe 476 SUPERFAMILY SSF51366 34 276 4.36E-82 T 21-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 VFU_RS10835 e2aa50374770741d22b51af046aa42fe 476 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 280 471 1.3E-54 T 21-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 VFU_RS10835 e2aa50374770741d22b51af046aa42fe 476 Gene3D G3DSA:3.20.20.70 283 475 3.2E-63 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS10835 e2aa50374770741d22b51af046aa42fe 476 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 278 476 31.1 T 21-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 VFU_RS10835 e2aa50374770741d22b51af046aa42fe 476 Gene3D G3DSA:3.20.20.70 24 282 1.9E-101 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS10835 e2aa50374770741d22b51af046aa42fe 476 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 26 277 35.084 T 21-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 VFU_RS10835 e2aa50374770741d22b51af046aa42fe 476 Pfam PF00218 Indole-3-glycerol phosphate synthase 28 274 5.9E-96 T 21-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 VFU_RS10835 e2aa50374770741d22b51af046aa42fe 476 PANTHER PTHR22854:SF2 2 305 5.1E-141 T 21-04-2016 VFU_RS10835 e2aa50374770741d22b51af046aa42fe 476 PANTHER PTHR22854 2 305 5.1E-141 T 21-04-2016 VFU_RS10505 704baf4761c52bcd16116ec0dc9d33d5 105 SMART SM01022 7 105 9.6E-27 T 21-04-2016 IPR007374 ASCH domain VFU_RS10505 704baf4761c52bcd16116ec0dc9d33d5 105 Pfam PF04266 ASCH domain 7 103 2.3E-15 T 21-04-2016 IPR007374 ASCH domain VFU_RS10505 704baf4761c52bcd16116ec0dc9d33d5 105 Hamap MF_00684 UPF0267 protein YqfB [yqfB]. 3 104 30.582 T 21-04-2016 IPR008314 Uncharacterised conserved protein UCP029143 VFU_RS10505 704baf4761c52bcd16116ec0dc9d33d5 105 Gene3D G3DSA:2.30.130.30 3 104 2.5E-44 T 21-04-2016 VFU_RS10505 704baf4761c52bcd16116ec0dc9d33d5 105 PANTHER PTHR38088 3 105 7.0E-51 T 21-04-2016 VFU_RS10505 704baf4761c52bcd16116ec0dc9d33d5 105 SUPERFAMILY SSF88697 4 104 2.65E-32 T 21-04-2016 IPR015947 PUA-like domain VFU_RS10505 704baf4761c52bcd16116ec0dc9d33d5 105 PIRSF PIRSF029143 2 105 9.3E-46 T 21-04-2016 IPR008314 Uncharacterised conserved protein UCP029143 VFU_RS10505 704baf4761c52bcd16116ec0dc9d33d5 105 PANTHER PTHR38088:SF2 3 105 7.0E-51 T 21-04-2016 VFU_RS13560 2a0b95877c47b6f348577f651748ab3b 185 PANTHER PTHR11080 10 182 4.6E-43 T 21-04-2016 VFU_RS13560 2a0b95877c47b6f348577f651748ab3b 185 Gene3D G3DSA:3.40.50.850 8 180 4.0E-47 T 21-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 VFU_RS13560 2a0b95877c47b6f348577f651748ab3b 185 PANTHER PTHR11080:SF37 10 182 4.6E-43 T 21-04-2016 VFU_RS13560 2a0b95877c47b6f348577f651748ab3b 185 Pfam PF00857 Isochorismatase family 10 177 1.6E-38 T 21-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 VFU_RS13560 2a0b95877c47b6f348577f651748ab3b 185 SUPERFAMILY SSF52499 8 182 2.62E-47 T 21-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 VFU_RS10295 b301763ebcca82067103192be8a84860 342 SUPERFAMILY SSF52733 2 341 1.11E-109 T 21-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 VFU_RS10295 b301763ebcca82067103192be8a84860 342 Gene3D G3DSA:1.10.1610.10 2 60 3.3E-24 T 21-04-2016 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 VFU_RS10295 b301763ebcca82067103192be8a84860 342 Gene3D G3DSA:3.40.50.10210 61 323 9.4E-104 T 21-04-2016 VFU_RS10295 b301763ebcca82067103192be8a84860 342 Pfam PF02277 Phosphoribosyltransferase 2 340 2.0E-124 T 21-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 VFU_RS10295 b301763ebcca82067103192be8a84860 342 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 1 342 35.914 T 21-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 VFU_RS10295 b301763ebcca82067103192be8a84860 342 PANTHER PTHR21712:SF4 2 342 3.6E-109 T 21-04-2016 VFU_RS10295 b301763ebcca82067103192be8a84860 342 PANTHER PTHR21712 2 342 3.6E-109 T 21-04-2016 VFU_RS10295 b301763ebcca82067103192be8a84860 342 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 3 340 3.6E-126 T 21-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 VFU_RS05695 770aabd00feb1317e9df4e95ed8bec42 419 PANTHER PTHR21089 270 357 3.3E-144 T 21-04-2016 VFU_RS05695 770aabd00feb1317e9df4e95ed8bec42 419 PANTHER PTHR21089 67 254 3.3E-144 T 21-04-2016 VFU_RS05695 770aabd00feb1317e9df4e95ed8bec42 419 SUPERFAMILY SSF51735 161 313 3.24E-36 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS05695 770aabd00feb1317e9df4e95ed8bec42 419 PIRSF PIRSF000445 1 419 1.1E-156 T 21-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 VFU_RS05695 770aabd00feb1317e9df4e95ed8bec42 419 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 97 120 - T 21-04-2016 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 VFU_RS05695 770aabd00feb1317e9df4e95ed8bec42 419 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 416 30.651 T 21-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 VFU_RS05695 770aabd00feb1317e9df4e95ed8bec42 419 PANTHER PTHR21089:SF3 270 357 3.3E-144 T 21-04-2016 VFU_RS05695 770aabd00feb1317e9df4e95ed8bec42 419 PANTHER PTHR21089:SF3 67 254 3.3E-144 T 21-04-2016 VFU_RS05695 770aabd00feb1317e9df4e95ed8bec42 419 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 415 8.0E-146 T 21-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 VFU_RS05695 770aabd00feb1317e9df4e95ed8bec42 419 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 318 414 2.2E-21 T 21-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 VFU_RS05695 770aabd00feb1317e9df4e95ed8bec42 419 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 154 8.8E-52 T 21-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 VFU_RS05695 770aabd00feb1317e9df4e95ed8bec42 419 SUPERFAMILY SSF69742 1 156 2.75E-48 T 21-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 VFU_RS05695 770aabd00feb1317e9df4e95ed8bec42 419 SUPERFAMILY SSF69075 315 416 2.75E-26 T 21-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 VFU_RS05695 770aabd00feb1317e9df4e95ed8bec42 419 Gene3D G3DSA:3.40.50.720 182 355 4.3E-39 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS05695 770aabd00feb1317e9df4e95ed8bec42 419 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 170 304 2.4E-50 T 21-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase VFU_RS08095 76f5335bad8e037b557790cbd1a6c1f7 227 Gene3D G3DSA:3.40.190.10 71 159 3.4E-8 T 21-04-2016 VFU_RS08095 76f5335bad8e037b557790cbd1a6c1f7 227 PANTHER PTHR35936:SF4 2 226 2.2E-41 T 21-04-2016 VFU_RS08095 76f5335bad8e037b557790cbd1a6c1f7 227 SUPERFAMILY SSF53850 3 215 4.01E-42 T 21-04-2016 VFU_RS08095 76f5335bad8e037b557790cbd1a6c1f7 227 SMART SM00062 7 219 0.0032 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VFU_RS08095 76f5335bad8e037b557790cbd1a6c1f7 227 PANTHER PTHR35936 2 226 2.2E-41 T 21-04-2016 VFU_RS08095 76f5335bad8e037b557790cbd1a6c1f7 227 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 3 215 8.1E-29 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VFU_RS08095 76f5335bad8e037b557790cbd1a6c1f7 227 Gene3D G3DSA:3.40.190.10 3 70 7.7E-17 T 21-04-2016 VFU_RS08095 76f5335bad8e037b557790cbd1a6c1f7 227 Gene3D G3DSA:3.40.190.10 175 215 7.7E-17 T 21-04-2016 VFU_RS06095 4bed416092baa25c1b3275545f3e1ec1 179 Gene3D G3DSA:1.20.1380.10 67 179 1.8E-50 T 21-04-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 VFU_RS06095 4bed416092baa25c1b3275545f3e1ec1 179 PIRSF PIRSF019401 1 179 1.5E-53 T 21-04-2016 IPR005621 Negative modulator of initiation of replicationr SeqA GO:0003677|GO:0032297 VFU_RS06095 4bed416092baa25c1b3275545f3e1ec1 179 Gene3D G3DSA:1.10.1220.10 1 39 7.7E-25 T 21-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 VFU_RS06095 4bed416092baa25c1b3275545f3e1ec1 179 Pfam PF03925 SeqA protein C-terminal domain 70 177 1.2E-45 T 21-04-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 VFU_RS06095 4bed416092baa25c1b3275545f3e1ec1 179 SUPERFAMILY SSF82808 65 178 9.42E-48 T 21-04-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 VFU_RS06095 4bed416092baa25c1b3275545f3e1ec1 179 SUPERFAMILY SSF47598 1 34 7.78E-13 T 21-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 VFU_RS06095 4bed416092baa25c1b3275545f3e1ec1 179 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 179 41.044 T 21-04-2016 IPR005621 Negative modulator of initiation of replicationr SeqA GO:0003677|GO:0032297 VFU_RS09965 cc1c0b822bb5690914c04469eeec9a06 113 PANTHER PTHR34535 2 113 1.1E-32 T 21-04-2016 VFU_RS09965 cc1c0b822bb5690914c04469eeec9a06 113 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 112 1.6E-30 T 21-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 VFU_RS09965 cc1c0b822bb5690914c04469eeec9a06 113 PIRSF PIRSF004761 1 113 5.7E-33 T 21-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 VFU_RS09965 cc1c0b822bb5690914c04469eeec9a06 113 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 113 2.7E-31 T 21-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 VFU_RS09965 cc1c0b822bb5690914c04469eeec9a06 113 Hamap MF_00213 Probable hydrogenase nickel incorporation protein HypA [hypA]. 1 113 22.956 T 21-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 VFU_RS12495 a3ff2302a807b4ef2168460b6758fa7d 170 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 72 85 - T 21-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 VFU_RS12495 a3ff2302a807b4ef2168460b6758fa7d 170 SUPERFAMILY SSF53218 7 168 6.41E-48 T 21-04-2016 IPR001453 MoaB/Mog domain VFU_RS12495 a3ff2302a807b4ef2168460b6758fa7d 170 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 12 152 7.1E-38 T 21-04-2016 IPR001453 MoaB/Mog domain VFU_RS12495 a3ff2302a807b4ef2168460b6758fa7d 170 PANTHER PTHR10192 4 168 1.0E-99 T 21-04-2016 VFU_RS12495 a3ff2302a807b4ef2168460b6758fa7d 170 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 7 168 2.2E-85 T 21-04-2016 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 UniPathway: UPA00344 VFU_RS12495 a3ff2302a807b4ef2168460b6758fa7d 170 Pfam PF00994 Probable molybdopterin binding domain 14 155 2.8E-35 T 21-04-2016 IPR001453 MoaB/Mog domain VFU_RS12495 a3ff2302a807b4ef2168460b6758fa7d 170 SMART SM00852 14 158 1.7E-29 T 21-04-2016 IPR001453 MoaB/Mog domain VFU_RS12495 a3ff2302a807b4ef2168460b6758fa7d 170 Gene3D G3DSA:3.40.980.10 6 166 4.9E-51 T 21-04-2016 IPR001453 MoaB/Mog domain VFU_RS12495 a3ff2302a807b4ef2168460b6758fa7d 170 PANTHER PTHR10192:SF18 4 168 1.0E-99 T 21-04-2016 VFU_RS12495 a3ff2302a807b4ef2168460b6758fa7d 170 PIRSF PIRSF006443 1 166 7.2E-67 T 21-04-2016 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 UniPathway: UPA00344 VFU_RS02245 49adc25b367d771f275d1eeeebb02d74 309 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 17 305 2.2E-108 T 21-04-2016 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 VFU_RS02245 49adc25b367d771f275d1eeeebb02d74 309 SUPERFAMILY SSF56349 15 297 2.47E-52 T 21-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VFU_RS02245 49adc25b367d771f275d1eeeebb02d74 309 Pfam PF00589 Phage integrase family 121 289 2.4E-47 T 21-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VFU_RS02245 49adc25b367d771f275d1eeeebb02d74 309 Gene3D G3DSA:1.10.443.10 122 297 2.2E-50 T 21-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VFU_RS02245 49adc25b367d771f275d1eeeebb02d74 309 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 12 303 35.271 T 21-04-2016 IPR023009 Tyrosine recombinase XerC/XerD VFU_RS02245 49adc25b367d771f275d1eeeebb02d74 309 Gene3D G3DSA:1.10.150.130 14 109 1.8E-21 T 21-04-2016 IPR023109 Integrase/recombinase, N-terminal VFU_RS02245 49adc25b367d771f275d1eeeebb02d74 309 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 16 99 1.2E-20 T 21-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VFU_RS02245 49adc25b367d771f275d1eeeebb02d74 309 PANTHER PTHR30349:SF17 16 306 1.1E-151 T 21-04-2016 VFU_RS02245 49adc25b367d771f275d1eeeebb02d74 309 PANTHER PTHR30349 16 306 1.1E-151 T 21-04-2016 VFU_RS12155 50d6b773c3854efe814284338a3bc310 87 Gene3D G3DSA:3.30.2220.10 18 75 3.5E-4 T 21-04-2016 VFU_RS12155 50d6b773c3854efe814284338a3bc310 87 ProDom PD068655 ORF26 3'REGION LYS GENE PRECURSOR ORF30 SIGNAL PHAGE 5 86 4.0E-12 T 21-04-2016 IPR024406 Phage tail assembly chaperone TAC_10 VFU_RS12155 50d6b773c3854efe814284338a3bc310 87 Pfam PF10963 Phage tail assembly chaperone 5 87 4.1E-31 T 21-04-2016 IPR024406 Phage tail assembly chaperone TAC_10 VFU_RS03125 b75554e3c412ec2e5d8ad9c6c33ec3c0 574 PRINTS PR00811 Bacterial general secretion pathway protein D signature 560 574 2.2E-19 T 21-04-2016 IPR001775 GspD/PilQ family VFU_RS03125 b75554e3c412ec2e5d8ad9c6c33ec3c0 574 PRINTS PR00811 Bacterial general secretion pathway protein D signature 410 434 2.2E-19 T 21-04-2016 IPR001775 GspD/PilQ family VFU_RS03125 b75554e3c412ec2e5d8ad9c6c33ec3c0 574 PRINTS PR00811 Bacterial general secretion pathway protein D signature 537 555 2.2E-19 T 21-04-2016 IPR001775 GspD/PilQ family VFU_RS03125 b75554e3c412ec2e5d8ad9c6c33ec3c0 574 PRINTS PR00811 Bacterial general secretion pathway protein D signature 318 328 2.2E-19 T 21-04-2016 IPR001775 GspD/PilQ family VFU_RS03125 b75554e3c412ec2e5d8ad9c6c33ec3c0 574 PRINTS PR00811 Bacterial general secretion pathway protein D signature 445 455 2.2E-19 T 21-04-2016 IPR001775 GspD/PilQ family VFU_RS03125 b75554e3c412ec2e5d8ad9c6c33ec3c0 574 PANTHER PTHR30604 22 574 7.0E-137 T 21-04-2016 VFU_RS03125 b75554e3c412ec2e5d8ad9c6c33ec3c0 574 Pfam PF03958 Bacterial type II/III secretion system short domain 253 318 1.0E-10 T 21-04-2016 IPR005644 NolW-like VFU_RS03125 b75554e3c412ec2e5d8ad9c6c33ec3c0 574 Pfam PF07660 Secretin and TonB N terminus short domain 179 227 6.7E-7 T 21-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 VFU_RS03125 b75554e3c412ec2e5d8ad9c6c33ec3c0 574 SMART SM00965 179 227 2.2E-9 T 21-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 VFU_RS03125 b75554e3c412ec2e5d8ad9c6c33ec3c0 574 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 154 572 1.3E-162 T 21-04-2016 IPR013355 Type IV pilus secretin PilQ GO:0009297|GO:0009306 VFU_RS03125 b75554e3c412ec2e5d8ad9c6c33ec3c0 574 Pfam PF00263 Bacterial type II and III secretion system protein 414 572 1.2E-45 T 21-04-2016 IPR004846 Type II/III secretion system GO:0009306 VFU_RS03125 b75554e3c412ec2e5d8ad9c6c33ec3c0 574 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 518 551 - T 21-04-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 VFU_RS05195 db9733a7b77dc5759814c9ad38c18146 149 PANTHER PTHR30455:SF2 2 149 7.4E-76 T 21-04-2016 VFU_RS05195 db9733a7b77dc5759814c9ad38c18146 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 1.0E-72 T 21-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 VFU_RS05195 db9733a7b77dc5759814c9ad38c18146 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 90.95 T 21-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 VFU_RS05195 db9733a7b77dc5759814c9ad38c18146 149 PANTHER PTHR30455 2 149 7.4E-76 T 21-04-2016 VFU_RS05195 db9733a7b77dc5759814c9ad38c18146 149 Pfam PF03477 ATP cone domain 50 136 1.0E-16 T 21-04-2016 IPR005144 ATP-cone domain VFU_RS10580 f3615ce4e1e85df73ab1d8af91fc9674 367 PANTHER PTHR11609:SF1 39 367 4.7E-74 T 21-04-2016 VFU_RS10580 f3615ce4e1e85df73ab1d8af91fc9674 367 TIGRFAM TIGR02735 purC_vibrio: phosphoribosylaminoimidazole-succinocarboxamide synthase 2 366 7.4E-220 T 21-04-2016 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 VFU_RS10580 f3615ce4e1e85df73ab1d8af91fc9674 367 Pfam PF01259 SAICAR synthetase 22 293 7.5E-49 T 21-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 VFU_RS10580 f3615ce4e1e85df73ab1d8af91fc9674 367 PANTHER PTHR11609 39 367 4.7E-74 T 21-04-2016 VFU_RS10580 f3615ce4e1e85df73ab1d8af91fc9674 367 ProSitePatterns PS01057 SAICAR synthetase signature 1. 124 138 - T 21-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 VFU_RS10580 f3615ce4e1e85df73ab1d8af91fc9674 367 Gene3D G3DSA:3.30.200.20 13 135 8.4E-34 T 21-04-2016 VFU_RS10580 f3615ce4e1e85df73ab1d8af91fc9674 367 SUPERFAMILY SSF56104 14 343 3.92E-65 T 21-04-2016 VFU_RS10580 f3615ce4e1e85df73ab1d8af91fc9674 367 Gene3D G3DSA:3.30.470.20 136 282 3.1E-41 T 21-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VFU_RS10580 f3615ce4e1e85df73ab1d8af91fc9674 367 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 19 342 21.691 T 21-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 VFU_RS02885 1fe498482fdb2f0002219b01def4a4ab 388 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 4 383 4.1E-202 T 21-04-2016 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|UniPathway: UPA00051 VFU_RS02885 1fe498482fdb2f0002219b01def4a4ab 388 SUPERFAMILY SSF53383 11 383 7.74E-115 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VFU_RS02885 1fe498482fdb2f0002219b01def4a4ab 388 Gene3D G3DSA:3.40.640.10 5 247 1.4E-83 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VFU_RS02885 1fe498482fdb2f0002219b01def4a4ab 388 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 381 7.0E-134 T 21-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VFU_RS02885 1fe498482fdb2f0002219b01def4a4ab 388 PANTHER PTHR11808 3 386 8.0E-172 T 21-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VFU_RS02885 1fe498482fdb2f0002219b01def4a4ab 388 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 191 205 - T 21-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VFU_RS02885 1fe498482fdb2f0002219b01def4a4ab 388 PANTHER PTHR11808:SF15 3 386 8.0E-172 T 21-04-2016 VFU_RS02885 1fe498482fdb2f0002219b01def4a4ab 388 Gene3D G3DSA:3.90.1150.10 250 385 2.8E-48 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VFU_RS02885 1fe498482fdb2f0002219b01def4a4ab 388 PIRSF PIRSF001434 1 385 9.6E-129 T 21-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VFU_RS12890 f8def25c8ac4dd43df1d141f97c5f065 218 PANTHER PTHR10993 1 209 2.2E-77 T 21-04-2016 VFU_RS12890 f8def25c8ac4dd43df1d141f97c5f065 218 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 74 127 8.0E-23 T 21-04-2016 VFU_RS12890 f8def25c8ac4dd43df1d141f97c5f065 218 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 26 203 1.1E-72 T 21-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 VFU_RS12890 f8def25c8ac4dd43df1d141f97c5f065 218 Pfam PF03099 Biotin/lipoate A/B protein ligase family 58 158 1.1E-8 T 21-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 VFU_RS12890 f8def25c8ac4dd43df1d141f97c5f065 218 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 70 85 - T 21-04-2016 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 VFU_RS12890 f8def25c8ac4dd43df1d141f97c5f065 218 SUPERFAMILY SSF55681 3 205 4.81E-72 T 21-04-2016 VFU_RS12890 f8def25c8ac4dd43df1d141f97c5f065 218 PIRSF PIRSF016262 1 215 6.0E-63 T 21-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 VFU_RS12890 f8def25c8ac4dd43df1d141f97c5f065 218 Gene3D G3DSA:3.90.1550.10 3 202 2.4E-73 T 21-04-2016 VFU_RS12890 f8def25c8ac4dd43df1d141f97c5f065 218 Hamap MF_00013 Octanoyltransferase [lipB]. 4 205 38.857 T 21-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 VFU_RS14860 d080d4ec0517fabb07f76f76a3299602 167 PANTHER PTHR33219 1 167 1.5E-74 T 21-04-2016 VFU_RS14860 d080d4ec0517fabb07f76f76a3299602 167 PANTHER PTHR33219:SF5 1 167 1.5E-74 T 21-04-2016 VFU_RS14860 d080d4ec0517fabb07f76f76a3299602 167 Pfam PF02325 YGGT family 1 60 1.9E-15 T 21-04-2016 IPR003425 CCB3/YggT GO:0016020 VFU_RS14860 d080d4ec0517fabb07f76f76a3299602 167 Pfam PF02325 YGGT family 91 155 8.6E-20 T 21-04-2016 IPR003425 CCB3/YggT GO:0016020 VFU_RS13075 503223e37caebbfe9b78e168adb4f54b 254 Pfam PF01618 MotA/TolQ/ExbB proton channel family 99 213 4.4E-22 T 21-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 VFU_RS13075 503223e37caebbfe9b78e168adb4f54b 254 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 182 199 - T 21-04-2016 IPR000540 Flagellar motor protein MotA, conserved site VFU_RS13075 503223e37caebbfe9b78e168adb4f54b 254 PANTHER PTHR30433 2 254 3.1E-127 T 21-04-2016 VFU_RS13075 503223e37caebbfe9b78e168adb4f54b 254 PANTHER PTHR30433:SF2 2 254 3.1E-127 T 21-04-2016 IPR022522 Flagellar motor stator, MotA VFU_RS04625 3071900a380af42e9e5063392f562ac6 131 PANTHER PTHR33515 1 131 7.3E-48 T 21-04-2016 VFU_RS04625 3071900a380af42e9e5063392f562ac6 131 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 118 21.277 T 21-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 VFU_RS04625 3071900a380af42e9e5063392f562ac6 131 SUPERFAMILY SSF89919 2 105 3.53E-32 T 21-04-2016 IPR023799 Ribosome-binding factor A domain VFU_RS04625 3071900a380af42e9e5063392f562ac6 131 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 98 4.0E-46 T 21-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 VFU_RS04625 3071900a380af42e9e5063392f562ac6 131 ProSitePatterns PS01319 Ribosome-binding factor A signature. 77 98 - T 21-04-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 VFU_RS04625 3071900a380af42e9e5063392f562ac6 131 Gene3D G3DSA:3.30.300.20 4 119 3.3E-37 T 21-04-2016 IPR015946 K homology domain-like, alpha/beta VFU_RS04625 3071900a380af42e9e5063392f562ac6 131 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 3 116 2.9E-35 T 21-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 VFU_RS04625 3071900a380af42e9e5063392f562ac6 131 Pfam PF02033 Ribosome-binding factor A 7 110 3.8E-30 T 21-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 VFU_RS14275 6836d4829e757a4e1473e542f0b539d6 287 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 213 7.2E-29 T 21-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 VFU_RS14275 6836d4829e757a4e1473e542f0b539d6 287 Gene3D G3DSA:3.40.1010.10 13 121 3.8E-16 T 21-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 VFU_RS14275 6836d4829e757a4e1473e542f0b539d6 287 PANTHER PTHR21091 12 251 7.2E-94 T 21-04-2016 VFU_RS14275 6836d4829e757a4e1473e542f0b539d6 287 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 21-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VFU_RS14275 6836d4829e757a4e1473e542f0b539d6 287 PANTHER PTHR21091:SF18 12 251 7.2E-94 T 21-04-2016 VFU_RS14275 6836d4829e757a4e1473e542f0b539d6 287 SUPERFAMILY SSF53790 12 232 5.63E-86 T 21-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 VFU_RS14275 6836d4829e757a4e1473e542f0b539d6 287 Gene3D G3DSA:3.30.950.10 122 235 8.7E-45 T 21-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 VFU_RS14275 6836d4829e757a4e1473e542f0b539d6 287 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 284 1.1E-101 T 21-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VFU_RS14275 6836d4829e757a4e1473e542f0b539d6 287 PIRSF PIRSF005917 1 286 5.7E-108 T 21-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VFU_RS14275 6836d4829e757a4e1473e542f0b539d6 287 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.47 T 21-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VFU_RS01665 5ae0712ef9a80597d8692d7088369958 136 Pfam PF00893 Small Multidrug Resistance protein 7 101 3.9E-20 T 21-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 VFU_RS01665 5ae0712ef9a80597d8692d7088369958 136 SUPERFAMILY SSF103481 29 114 2.35E-16 T 21-04-2016 VFU_RS01665 5ae0712ef9a80597d8692d7088369958 136 PANTHER PTHR30561 4 118 9.3E-35 T 21-04-2016 VFU_RS01665 5ae0712ef9a80597d8692d7088369958 136 PANTHER PTHR30561:SF1 4 118 9.3E-35 T 21-04-2016 VFU_RS05465 88585d54f21f49302d9cf3116b569287 332 Pfam PF01389 OmpA-like transmembrane domain 20 172 2.2E-37 T 21-04-2016 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 VFU_RS05465 88585d54f21f49302d9cf3116b569287 332 SUPERFAMILY SSF56925 19 172 2.17E-32 T 21-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VFU_RS05465 88585d54f21f49302d9cf3116b569287 332 Pfam PF00691 OmpA family 223 317 7.5E-24 T 21-04-2016 IPR006665 OmpA-like domain VFU_RS05465 88585d54f21f49302d9cf3116b569287 332 PRINTS PR01021 OMPA domain signature 268 284 7.9E-12 T 21-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VFU_RS05465 88585d54f21f49302d9cf3116b569287 332 PRINTS PR01021 OMPA domain signature 223 245 7.9E-12 T 21-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VFU_RS05465 88585d54f21f49302d9cf3116b569287 332 PRINTS PR01021 OMPA domain signature 253 268 7.9E-12 T 21-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VFU_RS05465 88585d54f21f49302d9cf3116b569287 332 PANTHER PTHR30128 4 330 2.6E-104 T 21-04-2016 VFU_RS05465 88585d54f21f49302d9cf3116b569287 332 Gene3D G3DSA:2.40.160.20 6 194 3.7E-51 T 21-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VFU_RS05465 88585d54f21f49302d9cf3116b569287 332 SUPERFAMILY SSF103088 197 323 1.57E-36 T 21-04-2016 IPR006665 OmpA-like domain VFU_RS05465 88585d54f21f49302d9cf3116b569287 332 PANTHER PTHR30128:SF15 4 330 2.6E-104 T 21-04-2016 VFU_RS05465 88585d54f21f49302d9cf3116b569287 332 Gene3D G3DSA:3.30.1330.60 210 323 2.1E-40 T 21-04-2016 IPR006665 OmpA-like domain VFU_RS04860 8954f178fda0be3b55e5b3b72fbda697 238 Gene3D G3DSA:2.20.25.10 215 237 3.2E-7 T 21-04-2016 VFU_RS04860 8954f178fda0be3b55e5b3b72fbda697 238 SMART SM00448 2 112 5.2E-28 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS04860 8954f178fda0be3b55e5b3b72fbda697 238 SMART SM00850 142 236 3.7E-27 T 21-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 VFU_RS04860 8954f178fda0be3b55e5b3b72fbda697 238 Pfam PF00072 Response regulator receiver domain 5 112 9.5E-24 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS04860 8954f178fda0be3b55e5b3b72fbda697 238 PANTHER PTHR26402 2 115 1.3E-35 T 21-04-2016 VFU_RS04860 8954f178fda0be3b55e5b3b72fbda697 238 PANTHER PTHR26402:SF524 2 115 1.3E-35 T 21-04-2016 VFU_RS04860 8954f178fda0be3b55e5b3b72fbda697 238 SUPERFAMILY SSF52172 1 124 1.27E-31 T 21-04-2016 IPR011006 CheY-like superfamily VFU_RS04860 8954f178fda0be3b55e5b3b72fbda697 238 Gene3D G3DSA:2.40.50.40 140 198 7.8E-10 T 21-04-2016 VFU_RS04860 8954f178fda0be3b55e5b3b72fbda697 238 Gene3D G3DSA:3.40.50.2300 1 121 1.7E-31 T 21-04-2016 VFU_RS04860 8954f178fda0be3b55e5b3b72fbda697 238 Pfam PF04397 LytTr DNA-binding domain 143 235 1.8E-24 T 21-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 VFU_RS06465 edfac5858914e031045b0c9fbe238955 252 Pfam PF04338 Protein of unknown function, DUF481 42 252 1.1E-41 T 21-04-2016 IPR007433 Protein of unknown function DUF481 VFU_RS06465 edfac5858914e031045b0c9fbe238955 252 SUPERFAMILY SSF56935 38 203 6.96E-5 T 21-04-2016 VFU_RS13525 75851b64aec344c7394b73c6888963a7 171 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 169 2.4E-42 T 21-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 VFU_RS13525 75851b64aec344c7394b73c6888963a7 171 PANTHER PTHR14021 1 166 1.3E-52 T 21-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 VFU_RS13525 75851b64aec344c7394b73c6888963a7 171 PANTHER PTHR14021:SF15 1 166 1.3E-52 T 21-04-2016 VFU_RS13525 75851b64aec344c7394b73c6888963a7 171 Gene3D G3DSA:1.20.1280.20 81 170 2.4E-31 T 21-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 VFU_RS13525 75851b64aec344c7394b73c6888963a7 171 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 170 25.593 T 21-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 VFU_RS13525 75851b64aec344c7394b73c6888963a7 171 SUPERFAMILY SSF47144 78 170 2.62E-25 T 21-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 VFU_RS13525 75851b64aec344c7394b73c6888963a7 171 Pfam PF00226 DnaJ domain 2 70 8.3E-7 T 21-04-2016 IPR001623 DnaJ domain VFU_RS13525 75851b64aec344c7394b73c6888963a7 171 SMART SM00271 1 66 5.0E-8 T 21-04-2016 IPR001623 DnaJ domain VFU_RS13525 75851b64aec344c7394b73c6888963a7 171 SUPERFAMILY SSF46565 1 74 6.8E-17 T 21-04-2016 IPR001623 DnaJ domain VFU_RS13525 75851b64aec344c7394b73c6888963a7 171 Gene3D G3DSA:1.10.287.110 1 73 3.4E-25 T 21-04-2016 IPR001623 DnaJ domain VFU_RS13525 75851b64aec344c7394b73c6888963a7 171 Pfam PF07743 HSCB C-terminal oligomerisation domain 87 163 1.9E-18 T 21-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 VFU_RS10015 b204d9d2de822336d9499fbaf24515c0 181 SUPERFAMILY SSF54862 1 165 1.26E-42 T 21-04-2016 VFU_RS10015 b204d9d2de822336d9499fbaf24515c0 181 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VFU_RS10015 b204d9d2de822336d9499fbaf24515c0 181 PANTHER PTHR11938:SF111 1 153 1.2E-60 T 21-04-2016 VFU_RS10015 b204d9d2de822336d9499fbaf24515c0 181 Pfam PF13247 4Fe-4S dicluster domain 53 155 7.7E-9 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VFU_RS10015 b204d9d2de822336d9499fbaf24515c0 181 Gene3D G3DSA:3.30.70.20 70 95 4.2E-18 T 21-04-2016 VFU_RS10015 b204d9d2de822336d9499fbaf24515c0 181 PANTHER PTHR11938 1 153 1.2E-60 T 21-04-2016 VFU_RS10015 b204d9d2de822336d9499fbaf24515c0 181 Gene3D G3DSA:3.30.70.20 96 170 3.1E-17 T 21-04-2016 VFU_RS10015 b204d9d2de822336d9499fbaf24515c0 181 Gene3D G3DSA:3.30.70.20 6 69 4.2E-10 T 21-04-2016 VFU_RS08220 ff60d2d8cd66c5ddb12a74e05602f93e 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 126 143 4.7E-10 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VFU_RS08220 ff60d2d8cd66c5ddb12a74e05602f93e 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 34 55 4.7E-10 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VFU_RS08220 ff60d2d8cd66c5ddb12a74e05602f93e 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 101 117 4.7E-10 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VFU_RS08220 ff60d2d8cd66c5ddb12a74e05602f93e 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 69 87 4.7E-10 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VFU_RS08220 ff60d2d8cd66c5ddb12a74e05602f93e 297 SMART SM01130 1 295 1.2E-66 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VFU_RS08220 ff60d2d8cd66c5ddb12a74e05602f93e 297 SUPERFAMILY SSF51569 1 295 3.56E-66 T 21-04-2016 VFU_RS08220 ff60d2d8cd66c5ddb12a74e05602f93e 297 PIRSF PIRSF001365 1 297 4.8E-58 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VFU_RS08220 ff60d2d8cd66c5ddb12a74e05602f93e 297 PANTHER PTHR12128 1 294 2.6E-47 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VFU_RS08220 ff60d2d8cd66c5ddb12a74e05602f93e 297 Gene3D G3DSA:3.20.20.70 1 296 2.4E-88 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS08220 ff60d2d8cd66c5ddb12a74e05602f93e 297 Pfam PF00701 Dihydrodipicolinate synthetase family 2 293 8.1E-38 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VFU_RS10725 c48fb35cfdb83fe8d35a0c0cc9df6d23 218 Pfam PF10014 2OG-Fe dioxygenase 24 208 3.2E-52 T 21-04-2016 IPR018724 2OG-Fe dioxygenase VFU_RS02555 29bf4edc8effa90c0ea6d66f014e5cac 542 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 11 541 3.3E-276 T 21-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 VFU_RS02555 29bf4edc8effa90c0ea6d66f014e5cac 542 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 266 281 - T 21-04-2016 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 VFU_RS02555 29bf4edc8effa90c0ea6d66f014e5cac 542 Pfam PF01293 Phosphoenolpyruvate carboxykinase 24 492 1.3E-209 T 21-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 VFU_RS02555 29bf4edc8effa90c0ea6d66f014e5cac 542 Hamap MF_00453 Phosphoenolpyruvate carboxykinase [ATP] [pckA]. 18 539 54.883 T 21-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 VFU_RS02555 29bf4edc8effa90c0ea6d66f014e5cac 542 PANTHER PTHR30031 5 542 0.0 T 21-04-2016 VFU_RS02555 29bf4edc8effa90c0ea6d66f014e5cac 542 SUPERFAMILY SSF68923 11 228 8.2E-87 T 21-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 VFU_RS02555 29bf4edc8effa90c0ea6d66f014e5cac 542 PANTHER PTHR30031:SF0 5 542 0.0 T 21-04-2016 VFU_RS02555 29bf4edc8effa90c0ea6d66f014e5cac 542 PIRSF PIRSF006294 4 541 1.2E-226 T 21-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 VFU_RS02555 29bf4edc8effa90c0ea6d66f014e5cac 542 Gene3D G3DSA:3.40.449.10 24 228 1.2E-85 T 21-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 VFU_RS02555 29bf4edc8effa90c0ea6d66f014e5cac 542 SUPERFAMILY SSF53795 230 541 2.49E-128 T 21-04-2016 VFU_RS02555 29bf4edc8effa90c0ea6d66f014e5cac 542 Gene3D G3DSA:3.90.228.20 352 540 8.6E-122 T 21-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 VFU_RS02555 29bf4edc8effa90c0ea6d66f014e5cac 542 Gene3D G3DSA:3.90.228.20 229 291 8.6E-122 T 21-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 VFU_RS20300 289555b8c5d294268b340a48c6499439 123 Pfam PF02508 Rnf-Nqr subunit, membrane protein 1 122 1.1E-47 T 21-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 VFU_RS20300 289555b8c5d294268b340a48c6499439 123 PANTHER PTHR30586 1 122 5.6E-88 T 21-04-2016 VFU_RS20300 289555b8c5d294268b340a48c6499439 123 PANTHER PTHR30586:SF1 1 122 5.6E-88 T 21-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 VFU_RS09070 aa5b4a4009c6ec552217ffe9d701c34c 458 PIRSF PIRSF006603 4 455 2.9E-59 T 21-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VFU_RS09070 aa5b4a4009c6ec552217ffe9d701c34c 458 PANTHER PTHR11206:SF153 3 454 1.0E-208 T 21-04-2016 VFU_RS09070 aa5b4a4009c6ec552217ffe9d701c34c 458 Pfam PF01554 MatE 245 406 6.3E-35 T 21-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VFU_RS09070 aa5b4a4009c6ec552217ffe9d701c34c 458 Pfam PF01554 MatE 19 178 5.2E-34 T 21-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VFU_RS09070 aa5b4a4009c6ec552217ffe9d701c34c 458 PANTHER PTHR11206 3 454 1.0E-208 T 21-04-2016 VFU_RS09070 aa5b4a4009c6ec552217ffe9d701c34c 458 TIGRFAM TIGR00797 matE: MATE efflux family protein 19 423 3.8E-113 T 21-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VFU_RS11110 5deaecb92f334dcbe12daaad90df84c7 200 SUPERFAMILY SSF52833 3 87 1.71E-11 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS11110 5deaecb92f334dcbe12daaad90df84c7 200 PANTHER PTHR11260:SF144 1 187 6.1E-21 T 21-04-2016 VFU_RS11110 5deaecb92f334dcbe12daaad90df84c7 200 Gene3D G3DSA:3.40.30.10 4 92 1.8E-16 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS11110 5deaecb92f334dcbe12daaad90df84c7 200 SUPERFAMILY SSF47616 77 190 4.72E-7 T 21-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like VFU_RS11110 5deaecb92f334dcbe12daaad90df84c7 200 Gene3D G3DSA:1.20.1050.10 93 188 1.5E-23 T 21-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like VFU_RS11110 5deaecb92f334dcbe12daaad90df84c7 200 Pfam PF13409 Glutathione S-transferase, N-terminal domain 9 73 2.1E-9 T 21-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VFU_RS11110 5deaecb92f334dcbe12daaad90df84c7 200 PANTHER PTHR11260 1 187 6.1E-21 T 21-04-2016 VFU_RS00705 c6f7cd76d85eae9401f29a2cd7b8175f 378 PANTHER PTHR33619:SF3 15 369 3.4E-74 T 21-04-2016 VFU_RS00705 c6f7cd76d85eae9401f29a2cd7b8175f 378 Gene3D G3DSA:3.10.560.10 166 245 5.5E-29 T 21-04-2016 VFU_RS00705 c6f7cd76d85eae9401f29a2cd7b8175f 378 Pfam PF10531 SLBB domain 257 304 1.3E-5 T 21-04-2016 IPR019554 Soluble ligand binding domain VFU_RS00705 c6f7cd76d85eae9401f29a2cd7b8175f 378 Pfam PF10531 SLBB domain 174 222 2.5E-9 T 21-04-2016 IPR019554 Soluble ligand binding domain VFU_RS00705 c6f7cd76d85eae9401f29a2cd7b8175f 378 Gene3D G3DSA:3.30.1950.10 90 165 1.9E-31 T 21-04-2016 VFU_RS00705 c6f7cd76d85eae9401f29a2cd7b8175f 378 Gene3D G3DSA:1.20.5.70 345 378 2.1E-21 T 21-04-2016 VFU_RS00705 c6f7cd76d85eae9401f29a2cd7b8175f 378 Gene3D G3DSA:3.10.560.10 246 343 4.4E-33 T 21-04-2016 VFU_RS00705 c6f7cd76d85eae9401f29a2cd7b8175f 378 PANTHER PTHR33619 15 369 3.4E-74 T 21-04-2016 VFU_RS00705 c6f7cd76d85eae9401f29a2cd7b8175f 378 Pfam PF02563 Polysaccharide biosynthesis/export protein 83 166 8.2E-27 T 21-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 VFU_RS12850 ae1143647bee743b62d38fcca4c47680 341 Gene3D G3DSA:1.10.8.60 144 221 3.2E-33 T 21-04-2016 VFU_RS12850 ae1143647bee743b62d38fcca4c47680 341 PANTHER PTHR34388 1 341 5.0E-84 T 21-04-2016 VFU_RS12850 ae1143647bee743b62d38fcca4c47680 341 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 331 7.1E-106 T 21-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 VFU_RS12850 ae1143647bee743b62d38fcca4c47680 341 SUPERFAMILY SSF48019 211 333 8.33E-35 T 21-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 VFU_RS12850 ae1143647bee743b62d38fcca4c47680 341 Pfam PF06144 DNA polymerase III, delta subunit 20 189 2.8E-45 T 21-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 VFU_RS12850 ae1143647bee743b62d38fcca4c47680 341 Gene3D G3DSA:1.20.272.20 222 334 7.2E-47 T 21-04-2016 VFU_RS12850 ae1143647bee743b62d38fcca4c47680 341 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 213 332 1.0E-37 T 21-04-2016 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS12850 ae1143647bee743b62d38fcca4c47680 341 SUPERFAMILY SSF52540 1 208 4.78E-48 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS12850 ae1143647bee743b62d38fcca4c47680 341 Gene3D G3DSA:3.40.50.300 1 138 1.5E-54 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS09975 686082832b61ce85cfeacd313251b1f4 383 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 7 372 2.8E-149 T 21-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 VFU_RS09975 686082832b61ce85cfeacd313251b1f4 383 PANTHER PTHR30149:SF0 6 380 3.5E-188 T 21-04-2016 VFU_RS09975 686082832b61ce85cfeacd313251b1f4 383 PANTHER PTHR30149 6 380 3.5E-188 T 21-04-2016 VFU_RS09975 686082832b61ce85cfeacd313251b1f4 383 Pfam PF01924 Hydrogenase formation hypA family 16 369 8.4E-150 T 21-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 VFU_RS09975 686082832b61ce85cfeacd313251b1f4 383 PIRSF PIRSF005622 5 374 8.2E-157 T 21-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 VFU_RS00845 fdc467414dae438892b7ffb1e60a38df 405 SUPERFAMILY SSF52507 1 182 6.8E-62 T 21-04-2016 IPR003382 Flavoprotein GO:0003824 VFU_RS00845 fdc467414dae438892b7ffb1e60a38df 405 SUPERFAMILY SSF102645 184 403 2.75E-78 T 21-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 VFU_RS00845 fdc467414dae438892b7ffb1e60a38df 405 Gene3D G3DSA:3.40.50.10300 187 404 7.3E-87 T 21-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 VFU_RS00845 fdc467414dae438892b7ffb1e60a38df 405 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 4 398 7.2E-147 T 21-04-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 VFU_RS00845 fdc467414dae438892b7ffb1e60a38df 405 Gene3D G3DSA:3.40.50.1950 2 186 2.3E-66 T 21-04-2016 IPR003382 Flavoprotein GO:0003824 VFU_RS00845 fdc467414dae438892b7ffb1e60a38df 405 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 186 370 1.1E-75 T 21-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 VFU_RS00845 fdc467414dae438892b7ffb1e60a38df 405 PANTHER PTHR14359:SF20 2 401 4.6E-194 T 21-04-2016 VFU_RS00845 fdc467414dae438892b7ffb1e60a38df 405 PANTHER PTHR14359 2 401 4.6E-194 T 21-04-2016 VFU_RS00845 fdc467414dae438892b7ffb1e60a38df 405 Pfam PF02441 Flavoprotein 7 135 4.2E-32 T 21-04-2016 IPR003382 Flavoprotein GO:0003824 VFU_RS08795 160e1415a4f29ed465db32e9d5c7ef48 217 PANTHER PTHR23026:SF101 1 216 3.2E-95 T 21-04-2016 VFU_RS08795 160e1415a4f29ed465db32e9d5c7ef48 217 Pfam PF00881 Nitroreductase family 8 193 2.3E-28 T 21-04-2016 IPR029479 Nitroreductase VFU_RS08795 160e1415a4f29ed465db32e9d5c7ef48 217 Gene3D G3DSA:3.40.109.10 1 215 1.8E-61 T 21-04-2016 IPR000415 Nitroreductase-like GO:0016491 VFU_RS08795 160e1415a4f29ed465db32e9d5c7ef48 217 SUPERFAMILY SSF55469 1 216 9.95E-63 T 21-04-2016 IPR000415 Nitroreductase-like GO:0016491 VFU_RS08795 160e1415a4f29ed465db32e9d5c7ef48 217 PANTHER PTHR23026 1 216 3.2E-95 T 21-04-2016 VFU_RS04465 0f77df436c8aa134b5a09049e9e31ae2 574 Pfam PF02927 Cellulase N-terminal ig-like domain 4 84 2.3E-7 T 21-04-2016 IPR004197 Cellulase, Ig-like domain GO:0005975|GO:0008810 VFU_RS04465 0f77df436c8aa134b5a09049e9e31ae2 574 SUPERFAMILY SSF81296 2 90 2.17E-11 T 21-04-2016 IPR014756 Immunoglobulin E-set VFU_RS04465 0f77df436c8aa134b5a09049e9e31ae2 574 Pfam PF00759 Glycosyl hydrolase family 9 100 500 9.9E-23 T 21-04-2016 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 VFU_RS04465 0f77df436c8aa134b5a09049e9e31ae2 574 Gene3D G3DSA:2.60.40.10 4 91 1.1E-12 T 21-04-2016 IPR013783 Immunoglobulin-like fold VFU_RS04465 0f77df436c8aa134b5a09049e9e31ae2 574 Gene3D G3DSA:1.50.10.10 99 561 3.6E-67 T 21-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 VFU_RS04465 0f77df436c8aa134b5a09049e9e31ae2 574 SUPERFAMILY SSF48208 84 565 1.97E-87 T 21-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 VFU_RS04145 95237c0b3e8a2326bf228595c20d66ec 266 SUPERFAMILY SSF101386 2 105 6.11E-23 T 21-04-2016 VFU_RS04145 95237c0b3e8a2326bf228595c20d66ec 266 TIGRFAM TIGR00444 mazG: MazG family protein 11 260 1.4E-101 T 21-04-2016 IPR011551 NTP pyrophosphohydrolase MazG VFU_RS04145 95237c0b3e8a2326bf228595c20d66ec 266 Gene3D G3DSA:1.10.287.1080 20 72 2.3E-6 T 21-04-2016 VFU_RS04145 95237c0b3e8a2326bf228595c20d66ec 266 Gene3D G3DSA:1.10.287.1080 134 223 1.9E-11 T 21-04-2016 VFU_RS04145 95237c0b3e8a2326bf228595c20d66ec 266 PANTHER PTHR30522:SF0 5 266 8.9E-122 T 21-04-2016 IPR011551 NTP pyrophosphohydrolase MazG VFU_RS04145 95237c0b3e8a2326bf228595c20d66ec 266 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 28 101 5.7E-26 T 21-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core VFU_RS04145 95237c0b3e8a2326bf228595c20d66ec 266 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 171 229 1.3E-6 T 21-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core VFU_RS04145 95237c0b3e8a2326bf228595c20d66ec 266 PANTHER PTHR30522 5 266 8.9E-122 T 21-04-2016 VFU_RS04145 95237c0b3e8a2326bf228595c20d66ec 266 SUPERFAMILY SSF101386 139 240 1.29E-23 T 21-04-2016 VFU_RS09795 7ac2bede433d2554261e3e7c7d1432dc 312 Gene3D G3DSA:1.10.8.210 150 210 5.0E-17 T 21-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 VFU_RS09795 7ac2bede433d2554261e3e7c7d1432dc 312 Pfam PF10414 Sirohaem synthase dimerisation region 151 204 7.8E-11 T 21-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 VFU_RS09795 7ac2bede433d2554261e3e7c7d1432dc 312 SUPERFAMILY SSF51735 1 113 6.3E-27 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS09795 7ac2bede433d2554261e3e7c7d1432dc 312 Gene3D G3DSA:3.40.50.720 1 113 6.5E-40 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS09795 7ac2bede433d2554261e3e7c7d1432dc 312 PANTHER PTHR35330 1 229 8.0E-56 T 21-04-2016 VFU_RS09795 7ac2bede433d2554261e3e7c7d1432dc 312 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 195 8.5E-59 T 21-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 VFU_RS09795 7ac2bede433d2554261e3e7c7d1432dc 312 Gene3D G3DSA:3.40.1010.10 213 288 1.1E-4 T 21-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 VFU_RS09795 7ac2bede433d2554261e3e7c7d1432dc 312 Gene3D G3DSA:3.30.160.110 114 149 1.1E-15 T 21-04-2016 VFU_RS09795 7ac2bede433d2554261e3e7c7d1432dc 312 Pfam PF13241 Putative NAD(P)-binding 6 116 5.2E-30 T 21-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 VFU_RS09795 7ac2bede433d2554261e3e7c7d1432dc 312 SUPERFAMILY SSF53790 224 290 3.34E-5 T 21-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 VFU_RS09795 7ac2bede433d2554261e3e7c7d1432dc 312 SUPERFAMILY SSF75615 109 206 1.03E-21 T 21-04-2016 VFU_RS14005 cd2b49fabbacc324144cbd2c35e40258 257 Pfam PF03883 Protein of unknown function (DUF328) 1 243 2.3E-93 T 21-04-2016 IPR005583 Peroxide stress protein YaaA VFU_RS14005 cd2b49fabbacc324144cbd2c35e40258 257 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 38.418 T 21-04-2016 IPR005583 Peroxide stress protein YaaA VFU_RS14005 cd2b49fabbacc324144cbd2c35e40258 257 PANTHER PTHR30283:SF3 2 255 2.0E-120 T 21-04-2016 VFU_RS14005 cd2b49fabbacc324144cbd2c35e40258 257 PANTHER PTHR30283 2 255 2.0E-120 T 21-04-2016 VFU_RS09935 a484f6ecec8f3fc6633afbaa2571e1bb 352 Gene3D G3DSA:3.30.70.270 181 338 5.0E-45 T 21-04-2016 VFU_RS09935 a484f6ecec8f3fc6633afbaa2571e1bb 352 Pfam PF00990 Diguanylate cyclase, GGDEF domain 179 333 1.1E-36 T 21-04-2016 IPR000160 GGDEF domain VFU_RS09935 a484f6ecec8f3fc6633afbaa2571e1bb 352 SMART SM00267 168 337 2.0E-47 T 21-04-2016 IPR000160 GGDEF domain VFU_RS09935 a484f6ecec8f3fc6633afbaa2571e1bb 352 SUPERFAMILY SSF55073 184 336 2.12E-39 T 21-04-2016 IPR029787 Nucleotide cyclase VFU_RS09935 a484f6ecec8f3fc6633afbaa2571e1bb 352 PANTHER PTHR10799 72 333 1.7E-20 T 21-04-2016 VFU_RS09935 a484f6ecec8f3fc6633afbaa2571e1bb 352 PANTHER PTHR10799:SF710 72 333 1.7E-20 T 21-04-2016 VFU_RS09935 a484f6ecec8f3fc6633afbaa2571e1bb 352 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 177 336 1.3E-39 T 21-04-2016 IPR000160 GGDEF domain VFU_RS05515 fd080e3c09d49c568b3b8446055d7e38 275 Pfam PF01739 CheR methyltransferase, SAM binding domain 76 269 7.2E-68 T 21-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal VFU_RS05515 fd080e3c09d49c568b3b8446055d7e38 275 PANTHER PTHR24422 1 275 4.7E-123 T 21-04-2016 VFU_RS05515 fd080e3c09d49c568b3b8446055d7e38 275 PANTHER PTHR24422:SF9 1 275 4.7E-123 T 21-04-2016 VFU_RS05515 fd080e3c09d49c568b3b8446055d7e38 275 SUPERFAMILY SSF53335 76 269 1.2E-49 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS05515 fd080e3c09d49c568b3b8446055d7e38 275 SMART SM00138 8 272 2.8E-133 T 21-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VFU_RS05515 fd080e3c09d49c568b3b8446055d7e38 275 Pfam PF03705 CheR methyltransferase, all-alpha domain 9 57 8.5E-11 T 21-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal VFU_RS05515 fd080e3c09d49c568b3b8446055d7e38 275 PRINTS PR00996 Glutamate methyltransferase family signature 231 254 3.5E-43 T 21-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VFU_RS05515 fd080e3c09d49c568b3b8446055d7e38 275 PRINTS PR00996 Glutamate methyltransferase family signature 143 159 3.5E-43 T 21-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VFU_RS05515 fd080e3c09d49c568b3b8446055d7e38 275 PRINTS PR00996 Glutamate methyltransferase family signature 30 43 3.5E-43 T 21-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VFU_RS05515 fd080e3c09d49c568b3b8446055d7e38 275 PRINTS PR00996 Glutamate methyltransferase family signature 212 226 3.5E-43 T 21-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VFU_RS05515 fd080e3c09d49c568b3b8446055d7e38 275 PRINTS PR00996 Glutamate methyltransferase family signature 106 126 3.5E-43 T 21-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VFU_RS05515 fd080e3c09d49c568b3b8446055d7e38 275 PRINTS PR00996 Glutamate methyltransferase family signature 69 81 3.5E-43 T 21-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VFU_RS05515 fd080e3c09d49c568b3b8446055d7e38 275 Gene3D G3DSA:3.40.50.150 75 270 2.3E-63 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS05515 fd080e3c09d49c568b3b8446055d7e38 275 SUPERFAMILY SSF47757 3 75 3.4E-15 T 21-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal VFU_RS05515 fd080e3c09d49c568b3b8446055d7e38 275 Gene3D G3DSA:1.10.155.10 3 74 9.7E-16 T 21-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal VFU_RS11835 09841ff4838403a1299a0303ddc2158b 484 PANTHER PTHR24423 221 479 3.7E-44 T 21-04-2016 VFU_RS11835 09841ff4838403a1299a0303ddc2158b 484 Pfam PF00672 HAMP domain 210 276 1.3E-10 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS11835 09841ff4838403a1299a0303ddc2158b 484 SMART SM00387 377 482 2.9E-26 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS11835 09841ff4838403a1299a0303ddc2158b 484 SUPERFAMILY SSF55874 340 479 1.07E-30 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS11835 09841ff4838403a1299a0303ddc2158b 484 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 381 481 1.1E-17 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS11835 09841ff4838403a1299a0303ddc2158b 484 Gene3D G3DSA:1.10.287.130 270 331 1.5E-11 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS11835 09841ff4838403a1299a0303ddc2158b 484 SMART SM00304 227 279 3.6E-4 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS11835 09841ff4838403a1299a0303ddc2158b 484 SUPERFAMILY SSF47384 264 327 1.47E-10 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS11835 09841ff4838403a1299a0303ddc2158b 484 PANTHER PTHR24423:SF533 221 479 3.7E-44 T 21-04-2016 VFU_RS11835 09841ff4838403a1299a0303ddc2158b 484 Gene3D G3DSA:3.30.565.10 347 479 4.6E-29 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS11835 09841ff4838403a1299a0303ddc2158b 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 425 3.0E-11 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS11835 09841ff4838403a1299a0303ddc2158b 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 460 3.0E-11 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS11835 09841ff4838403a1299a0303ddc2158b 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 439 3.0E-11 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS11835 09841ff4838403a1299a0303ddc2158b 484 SMART SM00388 280 338 0.0045 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS14770 c94576dac3ebf4179a5788a1260e273b 358 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 357 9.7E-182 T 21-04-2016 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 VFU_RS14770 c94576dac3ebf4179a5788a1260e273b 358 PANTHER PTHR30559:SF0 2 358 1.2E-248 T 21-04-2016 VFU_RS14770 c94576dac3ebf4179a5788a1260e273b 358 PANTHER PTHR30559 2 358 1.2E-248 T 21-04-2016 VFU_RS14770 c94576dac3ebf4179a5788a1260e273b 358 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 354 3.2E-91 T 21-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VFU_RS14770 c94576dac3ebf4179a5788a1260e273b 358 SUPERFAMILY SSF51569 4 356 1.81E-131 T 21-04-2016 VFU_RS14770 c94576dac3ebf4179a5788a1260e273b 358 PIRSF PIRSF001359 13 358 1.5E-97 T 21-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VFU_RS14770 c94576dac3ebf4179a5788a1260e273b 358 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 171 182 - T 21-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VFU_RS14770 c94576dac3ebf4179a5788a1260e273b 358 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 356 2.2E-112 T 21-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VFU_RS14770 c94576dac3ebf4179a5788a1260e273b 358 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 99 111 - T 21-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VFU_RS14770 c94576dac3ebf4179a5788a1260e273b 358 Gene3D G3DSA:3.20.20.70 11 355 1.1E-125 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS13055 ecc1f2d11b2f11e286b6ceccb7d399c6 211 Pfam PF12697 Alpha/beta hydrolase family 19 120 4.2E-6 T 21-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VFU_RS13055 ecc1f2d11b2f11e286b6ceccb7d399c6 211 Gene3D G3DSA:3.40.50.1820 16 183 5.8E-33 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold VFU_RS13055 ecc1f2d11b2f11e286b6ceccb7d399c6 211 PANTHER PTHR13136 20 204 4.5E-54 T 21-04-2016 IPR026555 KAT8 regulatory NSL complex subunit 3/Testis-expressed sequence 30 protein VFU_RS13055 ecc1f2d11b2f11e286b6ceccb7d399c6 211 SUPERFAMILY SSF53474 11 182 2.61E-27 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold VFU_RS13055 ecc1f2d11b2f11e286b6ceccb7d399c6 211 PANTHER PTHR13136:SF4 20 204 4.5E-54 T 21-04-2016 VFU_RS06735 2036f1bf37bfba2df8509bb5972fe7a8 93 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 90 2.9E-18 T 21-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 VFU_RS06735 2036f1bf37bfba2df8509bb5972fe7a8 93 Pfam PF04316 Anti-sigma-28 factor, FlgM 42 86 4.7E-7 T 21-04-2016 IPR031316 Anti-sigma-28 factor FlgM, C-terminal VFU_RS06735 2036f1bf37bfba2df8509bb5972fe7a8 93 SUPERFAMILY SSF101498 1 89 9.42E-10 T 21-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 VFU_RS02275 1e655ac586ec6d70d1d0c285c6f9972f 326 PANTHER PTHR11614:SF100 7 321 1.1E-122 T 21-04-2016 VFU_RS02275 1e655ac586ec6d70d1d0c285c6f9972f 326 PRINTS PR00111 Alpha/beta hydrolase fold signature 77 92 5.4E-6 T 21-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VFU_RS02275 1e655ac586ec6d70d1d0c285c6f9972f 326 PRINTS PR00111 Alpha/beta hydrolase fold signature 130 143 5.4E-6 T 21-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VFU_RS02275 1e655ac586ec6d70d1d0c285c6f9972f 326 PRINTS PR00111 Alpha/beta hydrolase fold signature 258 272 5.4E-6 T 21-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VFU_RS02275 1e655ac586ec6d70d1d0c285c6f9972f 326 Gene3D G3DSA:3.40.50.1820 21 319 1.5E-39 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold VFU_RS02275 1e655ac586ec6d70d1d0c285c6f9972f 326 SUPERFAMILY SSF53474 33 316 3.85E-38 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold VFU_RS02275 1e655ac586ec6d70d1d0c285c6f9972f 326 Pfam PF12146 Serine aminopeptidase, S33 48 305 8.2E-58 T 21-04-2016 IPR022742 Serine aminopeptidase, S33 VFU_RS02275 1e655ac586ec6d70d1d0c285c6f9972f 326 PANTHER PTHR11614 7 321 1.1E-122 T 21-04-2016 VFU_RS17535 e10a4ece447c21c0fe757abf7595aab1 143 PANTHER PTHR10133 23 143 5.4E-30 T 21-04-2016 VFU_RS17535 e10a4ece447c21c0fe757abf7595aab1 143 Pfam PF01612 3'-5' exonuclease 29 142 3.8E-25 T 21-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VFU_RS17535 e10a4ece447c21c0fe757abf7595aab1 143 SUPERFAMILY SSF53098 26 143 5.23E-32 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VFU_RS17535 e10a4ece447c21c0fe757abf7595aab1 143 Gene3D G3DSA:3.30.420.10 28 143 6.5E-44 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VFU_RS17535 e10a4ece447c21c0fe757abf7595aab1 143 PANTHER PTHR10133:SF27 23 143 5.4E-30 T 21-04-2016 VFU_RS04245 019ee73ffa633c743e90fc4ba5099682 757 Gene3D G3DSA:2.120.10.90 498 732 3.9E-28 T 21-04-2016 VFU_RS04245 019ee73ffa633c743e90fc4ba5099682 757 PANTHER PTHR10169:SF30 1 526 0.0 T 21-04-2016 VFU_RS04245 019ee73ffa633c743e90fc4ba5099682 757 SMART SM00434 13 463 3.7E-234 T 21-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS04245 019ee73ffa633c743e90fc4ba5099682 757 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 647 693 9.3E-9 T 21-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VFU_RS04245 019ee73ffa633c743e90fc4ba5099682 757 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 600 641 0.0056 T 21-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VFU_RS04245 019ee73ffa633c743e90fc4ba5099682 757 PANTHER PTHR10169 1 526 0.0 T 21-04-2016 VFU_RS04245 019ee73ffa633c743e90fc4ba5099682 757 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 6 745 33.924 T 21-04-2016 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VFU_RS04245 019ee73ffa633c743e90fc4ba5099682 757 SUPERFAMILY SSF56719 33 485 4.32E-156 T 21-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 VFU_RS04245 019ee73ffa633c743e90fc4ba5099682 757 Gene3D G3DSA:3.30.1360.40 240 333 3.9E-25 T 21-04-2016 IPR024946 Arginine repressor C-terminal-like domain VFU_RS04245 019ee73ffa633c743e90fc4ba5099682 757 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 10 744 0.0 T 21-04-2016 VFU_RS04245 019ee73ffa633c743e90fc4ba5099682 757 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 34 470 7.2E-137 T 21-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS04245 019ee73ffa633c743e90fc4ba5099682 757 Gene3D G3DSA:3.90.199.10 32 239 2.8E-106 T 21-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 VFU_RS04245 019ee73ffa633c743e90fc4ba5099682 757 Gene3D G3DSA:3.90.199.10 335 399 2.8E-106 T 21-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 VFU_RS04245 019ee73ffa633c743e90fc4ba5099682 757 SUPERFAMILY SSF101904 499 743 9.02E-51 T 21-04-2016 VFU_RS10135 9cf213ab28c6ec1dc49579bb9e7c4f78 365 SUPERFAMILY SSF53335 84 353 1.54E-31 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS10135 9cf213ab28c6ec1dc49579bb9e7c4f78 365 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 45 355 54.544 T 21-04-2016 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 VFU_RS10135 9cf213ab28c6ec1dc49579bb9e7c4f78 365 Pfam PF05971 Protein of unknown function (DUF890) 45 353 3.6E-139 T 21-04-2016 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 VFU_RS10135 9cf213ab28c6ec1dc49579bb9e7c4f78 365 PIRSF PIRSF029038 34 365 1.4E-152 T 21-04-2016 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 VFU_RS10135 9cf213ab28c6ec1dc49579bb9e7c4f78 365 PANTHER PTHR13393 268 357 2.7E-116 T 21-04-2016 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 VFU_RS10135 9cf213ab28c6ec1dc49579bb9e7c4f78 365 PANTHER PTHR13393 29 249 2.7E-116 T 21-04-2016 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 VFU_RS10135 9cf213ab28c6ec1dc49579bb9e7c4f78 365 Gene3D G3DSA:3.40.50.150 141 242 1.3E-7 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS10135 9cf213ab28c6ec1dc49579bb9e7c4f78 365 PANTHER PTHR13393:SF0 268 357 2.7E-116 T 21-04-2016 VFU_RS10135 9cf213ab28c6ec1dc49579bb9e7c4f78 365 PANTHER PTHR13393:SF0 29 249 2.7E-116 T 21-04-2016 VFU_RS06455 ffe09e5e7297f74922bb0121a718afde 291 SUPERFAMILY SSF103481 197 290 4.58E-5 T 21-04-2016 VFU_RS06455 ffe09e5e7297f74922bb0121a718afde 291 SUPERFAMILY SSF103481 41 143 3.92E-8 T 21-04-2016 VFU_RS06455 ffe09e5e7297f74922bb0121a718afde 291 PANTHER PTHR22911 1 290 1.9E-118 T 21-04-2016 VFU_RS06455 ffe09e5e7297f74922bb0121a718afde 291 PANTHER PTHR22911:SF65 1 290 1.9E-118 T 21-04-2016 VFU_RS05305 e9ba55068619c79f9ace358307f7d0e8 152 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 10 148 5.6E-59 T 21-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 VFU_RS05305 e9ba55068619c79f9ace358307f7d0e8 152 SUPERFAMILY SSF54637 8 148 5.04E-50 T 21-04-2016 IPR029069 HotDog domain VFU_RS05305 e9ba55068619c79f9ace358307f7d0e8 152 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 10 151 36.708 T 21-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 VFU_RS05305 e9ba55068619c79f9ace358307f7d0e8 152 PANTHER PTHR30272 1 152 1.2E-83 T 21-04-2016 VFU_RS05305 e9ba55068619c79f9ace358307f7d0e8 152 Gene3D G3DSA:3.10.129.10 4 149 3.7E-58 T 21-04-2016 IPR029069 HotDog domain VFU_RS05305 e9ba55068619c79f9ace358307f7d0e8 152 Pfam PF07977 FabA-like domain 19 143 3.9E-40 T 21-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 VFU_RS06220 0711be61b217ec83f208deb17d4df6fe 697 PANTHER PTHR30161:SF1 4 697 0.0 T 21-04-2016 VFU_RS06220 0711be61b217ec83f208deb17d4df6fe 697 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 694 2.6E-266 T 21-04-2016 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 VFU_RS06220 0711be61b217ec83f208deb17d4df6fe 697 PANTHER PTHR30161 4 697 0.0 T 21-04-2016 VFU_RS06220 0711be61b217ec83f208deb17d4df6fe 697 Pfam PF00771 FHIPEP family 32 687 3.1E-268 T 21-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VFU_RS06220 0711be61b217ec83f208deb17d4df6fe 697 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 21-04-2016 IPR025505 FHIPEP conserved site VFU_RS06220 0711be61b217ec83f208deb17d4df6fe 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 2.9E-56 T 21-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VFU_RS06220 0711be61b217ec83f208deb17d4df6fe 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 2.9E-56 T 21-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VFU_RS06220 0711be61b217ec83f208deb17d4df6fe 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 2.9E-56 T 21-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VFU_RS06220 0711be61b217ec83f208deb17d4df6fe 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 2.9E-56 T 21-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VFU_RS06220 0711be61b217ec83f208deb17d4df6fe 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 2.9E-56 T 21-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VFU_RS06220 0711be61b217ec83f208deb17d4df6fe 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 2.9E-56 T 21-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VFU_RS06220 0711be61b217ec83f208deb17d4df6fe 697 PIRSF PIRSF005419 10 697 1.5E-251 T 21-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VFU_RS09810 a2c06e7636f3429cffbc46c3dbc669d2 365 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 173 359 4.6E-24 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS09810 a2c06e7636f3429cffbc46c3dbc669d2 365 PANTHER PTHR30085 63 365 2.6E-179 T 21-04-2016 VFU_RS09810 a2c06e7636f3429cffbc46c3dbc669d2 365 SUPERFAMILY SSF161098 155 345 5.89E-41 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS09810 a2c06e7636f3429cffbc46c3dbc669d2 365 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 155 251 6.4E-22 T 21-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 VFU_RS09810 a2c06e7636f3429cffbc46c3dbc669d2 365 Gene3D G3DSA:1.10.3720.10 155 360 1.2E-46 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS09810 a2c06e7636f3429cffbc46c3dbc669d2 365 PANTHER PTHR30085:SF3 63 365 2.6E-179 T 21-04-2016 VFU_RS04700 e3b9711c6b88c7772f6a7e1aada9812c 529 SUPERFAMILY SSF50447 262 393 8.25E-28 T 21-04-2016 IPR009000 Translation protein, beta-barrel domain VFU_RS04700 e3b9711c6b88c7772f6a7e1aada9812c 529 Gene3D G3DSA:2.40.30.10 293 394 1.1E-24 T 21-04-2016 VFU_RS04700 e3b9711c6b88c7772f6a7e1aada9812c 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 21-04-2016 IPR031157 Tr-type G domain, conserved site VFU_RS04700 e3b9711c6b88c7772f6a7e1aada9812c 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 3.3E-10 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VFU_RS04700 e3b9711c6b88c7772f6a7e1aada9812c 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 3.3E-10 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VFU_RS04700 e3b9711c6b88c7772f6a7e1aada9812c 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 3.3E-10 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VFU_RS04700 e3b9711c6b88c7772f6a7e1aada9812c 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 3.3E-10 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VFU_RS04700 e3b9711c6b88c7772f6a7e1aada9812c 529 PANTHER PTHR23115:SF69 9 184 1.0E-249 T 21-04-2016 VFU_RS04700 e3b9711c6b88c7772f6a7e1aada9812c 529 PANTHER PTHR23115:SF69 251 472 1.0E-249 T 21-04-2016 VFU_RS04700 e3b9711c6b88c7772f6a7e1aada9812c 529 PANTHER PTHR23115 9 184 1.0E-249 T 21-04-2016 VFU_RS04700 e3b9711c6b88c7772f6a7e1aada9812c 529 PANTHER PTHR23115 251 472 1.0E-249 T 21-04-2016 VFU_RS04700 e3b9711c6b88c7772f6a7e1aada9812c 529 Gene3D G3DSA:3.40.50.300 10 282 3.5E-64 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS04700 e3b9711c6b88c7772f6a7e1aada9812c 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 52.029 T 21-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 VFU_RS04700 e3b9711c6b88c7772f6a7e1aada9812c 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 5.1E-46 T 21-04-2016 IPR032090 Peptide chain release factor 3, C-terminal VFU_RS04700 e3b9711c6b88c7772f6a7e1aada9812c 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 5 529 3.3E-303 T 21-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 VFU_RS04700 e3b9711c6b88c7772f6a7e1aada9812c 529 SUPERFAMILY SSF52540 10 277 3.25E-85 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS04700 e3b9711c6b88c7772f6a7e1aada9812c 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 6.6E-46 T 21-04-2016 VFU_RS04700 e3b9711c6b88c7772f6a7e1aada9812c 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 5.6E-9 T 21-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 VFU_RS04700 e3b9711c6b88c7772f6a7e1aada9812c 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 159 3.6E-19 T 21-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VFU_RS04700 e3b9711c6b88c7772f6a7e1aada9812c 529 Gene3D G3DSA:3.30.70.870 395 463 5.2E-14 T 21-04-2016 VFU_RS04700 e3b9711c6b88c7772f6a7e1aada9812c 529 SUPERFAMILY SSF54980 393 468 2.81E-17 T 21-04-2016 IPR009022 Elongation factor G, III-V domain VFU_RS00240 50d4cb682892baa540bf69afb63bee69 142 PANTHER PTHR11661 1 142 8.3E-72 T 21-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 VFU_RS00240 50d4cb682892baa540bf69afb63bee69 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 21-04-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 VFU_RS00240 50d4cb682892baa540bf69afb63bee69 142 Gene3D G3DSA:3.30.1550.10 2 72 1.4E-37 T 21-04-2016 IPR020784 Ribosomal protein L11, N-terminal VFU_RS00240 50d4cb682892baa540bf69afb63bee69 142 SUPERFAMILY SSF54747 3 73 1.44E-29 T 21-04-2016 IPR020784 Ribosomal protein L11, N-terminal VFU_RS00240 50d4cb682892baa540bf69afb63bee69 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 1.2E-23 T 21-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 VFU_RS00240 50d4cb682892baa540bf69afb63bee69 142 SUPERFAMILY SSF46906 68 141 2.88E-25 T 21-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 VFU_RS00240 50d4cb682892baa540bf69afb63bee69 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 3.3E-29 T 21-04-2016 IPR020784 Ribosomal protein L11, N-terminal VFU_RS00240 50d4cb682892baa540bf69afb63bee69 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 1.6E-64 T 21-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 VFU_RS00240 50d4cb682892baa540bf69afb63bee69 142 Gene3D G3DSA:1.10.10.250 73 141 8.7E-30 T 21-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 VFU_RS00240 50d4cb682892baa540bf69afb63bee69 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 71 6.0E-14 T 21-04-2016 VFU_RS00240 50d4cb682892baa540bf69afb63bee69 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.715 T 21-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 VFU_RS00240 50d4cb682892baa540bf69afb63bee69 142 SMART SM00649 9 141 9.5E-83 T 21-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 VFU_RS07760 f5312cda4b05e99408945f62de5dc63c 414 PANTHER PTHR10108 347 412 4.6E-109 T 21-04-2016 VFU_RS07760 f5312cda4b05e99408945f62de5dc63c 414 PANTHER PTHR10108 68 326 4.6E-109 T 21-04-2016 VFU_RS07760 f5312cda4b05e99408945f62de5dc63c 414 Gene3D G3DSA:3.40.50.150 135 411 4.6E-97 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS07760 f5312cda4b05e99408945f62de5dc63c 414 PIRSF PIRSF003085 13 414 1.2E-122 T 21-04-2016 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 VFU_RS07760 f5312cda4b05e99408945f62de5dc63c 414 Pfam PF02353 Mycolic acid cyclopropane synthetase 139 406 2.6E-81 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS07760 f5312cda4b05e99408945f62de5dc63c 414 PANTHER PTHR10108:SF805 347 412 4.6E-109 T 21-04-2016 VFU_RS07760 f5312cda4b05e99408945f62de5dc63c 414 PANTHER PTHR10108:SF805 68 326 4.6E-109 T 21-04-2016 VFU_RS07760 f5312cda4b05e99408945f62de5dc63c 414 SUPERFAMILY SSF53335 57 365 2.76E-85 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS14470 9c6f458edf77cbb21c3690adbed05f81 395 PANTHER PTHR21499 1 390 4.9E-132 T 21-04-2016 VFU_RS14470 9c6f458edf77cbb21c3690adbed05f81 395 PIRSF PIRSF000726 59 385 1.1E-73 T 21-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VFU_RS14470 9c6f458edf77cbb21c3690adbed05f81 395 SUPERFAMILY SSF55021 311 381 7.1E-5 T 21-04-2016 VFU_RS14470 9c6f458edf77cbb21c3690adbed05f81 395 Gene3D G3DSA:3.40.1160.10 4 245 1.1E-72 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VFU_RS14470 9c6f458edf77cbb21c3690adbed05f81 395 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 65 379 9.8E-78 T 21-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VFU_RS14470 9c6f458edf77cbb21c3690adbed05f81 395 SUPERFAMILY SSF53633 6 242 1.44E-75 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VFU_RS14470 9c6f458edf77cbb21c3690adbed05f81 395 Pfam PF00696 Amino acid kinase family 5 231 3.8E-53 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VFU_RS14470 9c6f458edf77cbb21c3690adbed05f81 395 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 21-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VFU_RS14470 9c6f458edf77cbb21c3690adbed05f81 395 PANTHER PTHR21499:SF27 1 390 4.9E-132 T 21-04-2016 VFU_RS01275 5361cbc3df81fef643dc743124dfa5bd 325 PANTHER PTHR30465:SF47 1 320 2.3E-205 T 21-04-2016 VFU_RS01275 5361cbc3df81fef643dc743124dfa5bd 325 PANTHER PTHR30465 1 320 2.3E-205 T 21-04-2016 VFU_RS01275 5361cbc3df81fef643dc743124dfa5bd 325 Gene3D G3DSA:1.10.3720.10 88 312 1.3E-15 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS01275 5361cbc3df81fef643dc743124dfa5bd 325 SUPERFAMILY SSF161098 90 302 5.89E-15 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS01275 5361cbc3df81fef643dc743124dfa5bd 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 318 8.6E-38 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS08630 23efd8d8c0a2f47e8e857f51d745524a 629 PANTHER PTHR11911:SF110 147 454 6.3E-39 T 21-04-2016 VFU_RS08630 23efd8d8c0a2f47e8e857f51d745524a 629 Gene3D G3DSA:2.60.120.10 7 139 9.0E-25 T 21-04-2016 IPR014710 RmlC-like jelly roll fold VFU_RS08630 23efd8d8c0a2f47e8e857f51d745524a 629 Pfam PF03445 Putative nucleotidyltransferase DUF294 305 442 2.5E-45 T 21-04-2016 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 VFU_RS08630 23efd8d8c0a2f47e8e857f51d745524a 629 PANTHER PTHR11911 147 454 6.3E-39 T 21-04-2016 VFU_RS08630 23efd8d8c0a2f47e8e857f51d745524a 629 SUPERFAMILY SSF54631 150 278 1.59E-27 T 21-04-2016 VFU_RS08630 23efd8d8c0a2f47e8e857f51d745524a 629 SUPERFAMILY SSF51206 7 129 3.27E-28 T 21-04-2016 IPR018490 Cyclic nucleotide-binding-like VFU_RS08630 23efd8d8c0a2f47e8e857f51d745524a 629 Pfam PF00027 Cyclic nucleotide-binding domain 37 119 2.7E-13 T 21-04-2016 IPR000595 Cyclic nucleotide-binding domain VFU_RS08630 23efd8d8c0a2f47e8e857f51d745524a 629 Pfam PF00571 CBS domain 153 215 1.0E-6 T 21-04-2016 IPR000644 CBS domain VFU_RS08630 23efd8d8c0a2f47e8e857f51d745524a 629 Pfam PF00571 CBS domain 226 278 1.4E-10 T 21-04-2016 IPR000644 CBS domain VFU_RS08630 23efd8d8c0a2f47e8e857f51d745524a 629 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 479 622 1.5E-45 T 21-04-2016 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding VFU_RS08630 23efd8d8c0a2f47e8e857f51d745524a 629 SMART SM00116 233 280 5.5E-6 T 21-04-2016 IPR000644 CBS domain VFU_RS08630 23efd8d8c0a2f47e8e857f51d745524a 629 SMART SM00116 159 216 0.012 T 21-04-2016 IPR000644 CBS domain VFU_RS08630 23efd8d8c0a2f47e8e857f51d745524a 629 SMART SM00100 17 134 1.3E-7 T 21-04-2016 IPR000595 Cyclic nucleotide-binding domain VFU_RS08630 23efd8d8c0a2f47e8e857f51d745524a 629 Gene3D G3DSA:3.10.580.10 149 277 1.0E-29 T 21-04-2016 VFU_RS12990 b810e63348976ec51365518ab813d7fa 344 SUPERFAMILY SSF52540 1 239 1.86E-82 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS12990 b810e63348976ec51365518ab813d7fa 344 Pfam PF00005 ABC transporter 21 169 3.0E-35 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS12990 b810e63348976ec51365518ab813d7fa 344 Pfam PF09383 NIL domain 268 339 1.5E-21 T 21-04-2016 IPR018449 NIL domain VFU_RS12990 b810e63348976ec51365518ab813d7fa 344 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 3.4E-198 T 21-04-2016 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 VFU_RS12990 b810e63348976ec51365518ab813d7fa 344 SMART SM00382 30 224 6.5E-13 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS12990 b810e63348976ec51365518ab813d7fa 344 SUPERFAMILY SSF55021 248 343 1.26E-24 T 21-04-2016 VFU_RS12990 b810e63348976ec51365518ab813d7fa 344 Gene3D G3DSA:3.30.70.260 237 343 6.3E-31 T 21-04-2016 VFU_RS12990 b810e63348976ec51365518ab813d7fa 344 PANTHER PTHR24220 3 332 2.0E-175 T 21-04-2016 VFU_RS12990 b810e63348976ec51365518ab813d7fa 344 Gene3D G3DSA:3.40.50.300 1 236 1.3E-81 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS12990 b810e63348976ec51365518ab813d7fa 344 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS12990 b810e63348976ec51365518ab813d7fa 344 SMART SM00930 265 340 2.5E-25 T 21-04-2016 IPR018449 NIL domain VFU_RS12990 b810e63348976ec51365518ab813d7fa 344 PANTHER PTHR24220:SF455 3 332 2.0E-175 T 21-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 VFU_RS08715 e212e61f24d1930d32fe1e4b5979254b 568 SMART SM00387 316 427 1.1E-37 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS08715 e212e61f24d1930d32fe1e4b5979254b 568 SUPERFAMILY SSF52172 452 568 2.85E-35 T 21-04-2016 IPR011006 CheY-like superfamily VFU_RS08715 e212e61f24d1930d32fe1e4b5979254b 568 SUPERFAMILY SSF55874 258 427 4.85E-48 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS08715 e212e61f24d1930d32fe1e4b5979254b 568 Pfam PF00512 His Kinase A (phospho-acceptor) domain 206 269 3.1E-18 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS08715 e212e61f24d1930d32fe1e4b5979254b 568 Gene3D G3DSA:3.30.565.10 271 428 4.0E-45 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS08715 e212e61f24d1930d32fe1e4b5979254b 568 Gene3D G3DSA:3.40.50.2300 450 567 2.4E-38 T 21-04-2016 VFU_RS08715 e212e61f24d1930d32fe1e4b5979254b 568 PANTHER PTHR24423 31 49 3.0E-134 T 21-04-2016 VFU_RS08715 e212e61f24d1930d32fe1e4b5979254b 568 PANTHER PTHR24423 202 567 3.0E-134 T 21-04-2016 VFU_RS08715 e212e61f24d1930d32fe1e4b5979254b 568 Pfam PF00072 Response regulator receiver domain 454 563 1.8E-26 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS08715 e212e61f24d1930d32fe1e4b5979254b 568 SMART SM00448 452 563 1.1E-30 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS08715 e212e61f24d1930d32fe1e4b5979254b 568 Gene3D G3DSA:1.10.287.130 196 265 7.6E-16 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS08715 e212e61f24d1930d32fe1e4b5979254b 568 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 316 426 4.2E-29 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS08715 e212e61f24d1930d32fe1e4b5979254b 568 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 405 3.1E-17 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS08715 e212e61f24d1930d32fe1e4b5979254b 568 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 424 3.1E-17 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS08715 e212e61f24d1930d32fe1e4b5979254b 568 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 380 3.1E-17 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS08715 e212e61f24d1930d32fe1e4b5979254b 568 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 366 3.1E-17 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS08715 e212e61f24d1930d32fe1e4b5979254b 568 SMART SM00388 204 269 2.1E-20 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS08715 e212e61f24d1930d32fe1e4b5979254b 568 SUPERFAMILY SSF47384 194 269 6.28E-19 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS14120 f4a0a57e4bff3bf323a7a2add1917a9f 231 Pfam PF01048 Phosphorylase superfamily 2 227 2.9E-49 T 21-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VFU_RS14120 f4a0a57e4bff3bf323a7a2add1917a9f 231 Gene3D G3DSA:3.40.50.1580 1 230 1.6E-81 T 21-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VFU_RS14120 f4a0a57e4bff3bf323a7a2add1917a9f 231 SUPERFAMILY SSF53167 1 230 9.43E-74 T 21-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VFU_RS14120 f4a0a57e4bff3bf323a7a2add1917a9f 231 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 228 3.4E-102 T 21-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 VFU_RS14120 f4a0a57e4bff3bf323a7a2add1917a9f 231 PANTHER PTHR21234 1 230 5.9E-63 T 21-04-2016 IPR018017 Nucleoside phosphorylase VFU_RS14120 f4a0a57e4bff3bf323a7a2add1917a9f 231 PANTHER PTHR21234:SF16 1 230 5.9E-63 T 21-04-2016 VFU_RS14120 f4a0a57e4bff3bf323a7a2add1917a9f 231 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 230 47.973 T 21-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 VFU_RS07845 093569fb1d80d8b3f05be1a305f8f765 257 SUPERFAMILY SSF51366 1 256 1.1E-73 T 21-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 VFU_RS07845 093569fb1d80d8b3f05be1a305f8f765 257 PANTHER PTHR21235:SF2 1 256 5.1E-117 T 21-04-2016 VFU_RS07845 093569fb1d80d8b3f05be1a305f8f765 257 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 8.1E-113 T 21-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 VFU_RS07845 093569fb1d80d8b3f05be1a305f8f765 257 PANTHER PTHR21235 1 256 5.1E-117 T 21-04-2016 VFU_RS07845 093569fb1d80d8b3f05be1a305f8f765 257 Gene3D G3DSA:3.20.20.70 4 256 4.3E-88 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS07845 093569fb1d80d8b3f05be1a305f8f765 257 Pfam PF00977 Histidine biosynthesis protein 5 239 1.1E-77 T 21-04-2016 IPR006062 Histidine biosynthesis GO:0000105 VFU_RS07845 093569fb1d80d8b3f05be1a305f8f765 257 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 44.277 T 21-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 VFU_RS04190 807aabc3dbecaff1f70a9d3aa4c67d13 505 PANTHER PTHR39569:SF1 2 505 9.7E-149 T 21-04-2016 VFU_RS04190 807aabc3dbecaff1f70a9d3aa4c67d13 505 SMART SM01118 2 203 1.2E-40 T 21-04-2016 IPR023577 CYTH domain VFU_RS04190 807aabc3dbecaff1f70a9d3aa4c67d13 505 Pfam PF01928 CYTH domain 3 197 1.5E-32 T 21-04-2016 IPR023577 CYTH domain VFU_RS04190 807aabc3dbecaff1f70a9d3aa4c67d13 505 Gene3D G3DSA:2.40.320.10 1 210 2.2E-38 T 21-04-2016 IPR023577 CYTH domain VFU_RS04190 807aabc3dbecaff1f70a9d3aa4c67d13 505 SMART SM00880 229 497 4.2E-21 T 21-04-2016 IPR007899 CHAD domain VFU_RS04190 807aabc3dbecaff1f70a9d3aa4c67d13 505 PANTHER PTHR39569 2 505 9.7E-149 T 21-04-2016 VFU_RS04190 807aabc3dbecaff1f70a9d3aa4c67d13 505 Pfam PF05235 CHAD domain 230 395 6.6E-8 T 21-04-2016 IPR007899 CHAD domain VFU_RS04190 807aabc3dbecaff1f70a9d3aa4c67d13 505 SUPERFAMILY SSF55154 1 214 1.16E-51 T 21-04-2016 IPR033469 CYTH-like domain VFU_RS14115 7cd2c57de8bd65a95ecc616e6d6260ec 121 PIRSF PIRSF026426 1 119 1.8E-41 T 21-04-2016 IPR010865 Protein of unknown function DUF1499 VFU_RS14115 7cd2c57de8bd65a95ecc616e6d6260ec 121 Pfam PF07386 Protein of unknown function (DUF1499) 8 112 2.2E-21 T 21-04-2016 IPR010865 Protein of unknown function DUF1499 VFU_RS14115 7cd2c57de8bd65a95ecc616e6d6260ec 121 PANTHER PTHR34801 7 121 9.3E-35 T 21-04-2016 VFU_RS01795 d455337ef61a1d845a48d5bacace5ef5 288 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 288 3.7E-111 T 21-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VFU_RS01795 d455337ef61a1d845a48d5bacace5ef5 288 Gene3D G3DSA:3.40.1380.10 64 191 6.8E-44 T 21-04-2016 VFU_RS01795 d455337ef61a1d845a48d5bacace5ef5 288 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 288 36.547 T 21-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VFU_RS01795 d455337ef61a1d845a48d5bacace5ef5 288 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 274 287 - T 21-04-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site VFU_RS01795 d455337ef61a1d845a48d5bacace5ef5 288 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.3E-36 T 21-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VFU_RS01795 d455337ef61a1d845a48d5bacace5ef5 288 PRINTS PR00126 ATP synthase gamma subunit signature 235 254 1.3E-36 T 21-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VFU_RS01795 d455337ef61a1d845a48d5bacace5ef5 288 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 1.3E-36 T 21-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VFU_RS01795 d455337ef61a1d845a48d5bacace5ef5 288 PRINTS PR00126 ATP synthase gamma subunit signature 266 287 1.3E-36 T 21-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VFU_RS01795 d455337ef61a1d845a48d5bacace5ef5 288 Gene3D G3DSA:1.10.287.80 203 236 8.7E-39 T 21-04-2016 VFU_RS01795 d455337ef61a1d845a48d5bacace5ef5 288 Gene3D G3DSA:1.10.287.80 19 60 8.7E-39 T 21-04-2016 VFU_RS01795 d455337ef61a1d845a48d5bacace5ef5 288 Gene3D G3DSA:1.10.287.80 237 283 1.5E-30 T 21-04-2016 VFU_RS01795 d455337ef61a1d845a48d5bacace5ef5 288 PANTHER PTHR11693 1 288 9.8E-129 T 21-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VFU_RS01795 d455337ef61a1d845a48d5bacace5ef5 288 SUPERFAMILY SSF52943 2 288 9.81E-96 T 21-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain VFU_RS01795 d455337ef61a1d845a48d5bacace5ef5 288 Pfam PF00231 ATP synthase 5 287 2.8E-92 T 21-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VFU_RS07645 009b6c0f5916c12a19b65cb789c506f6 198 SUPERFAMILY SSF89392 20 197 3.06E-50 T 21-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX VFU_RS07645 009b6c0f5916c12a19b65cb789c506f6 198 Gene3D G3DSA:2.50.20.10 20 197 1.2E-51 T 21-04-2016 VFU_RS07645 009b6c0f5916c12a19b65cb789c506f6 198 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 29 186 3.0E-54 T 21-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like VFU_RS07645 009b6c0f5916c12a19b65cb789c506f6 198 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 10 197 1.9E-58 T 21-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 VFU_RS07645 009b6c0f5916c12a19b65cb789c506f6 198 PANTHER PTHR35869 4 198 4.2E-52 T 21-04-2016 VFU_RS07645 009b6c0f5916c12a19b65cb789c506f6 198 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 5 196 30.775 T 21-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 VFU_RS03870 09c4041139cdb5e63314b6f0fd25bcb0 301 SUPERFAMILY SSF46785 3 82 9.85E-21 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS03870 09c4041139cdb5e63314b6f0fd25bcb0 301 Gene3D G3DSA:3.40.190.10 177 257 6.1E-11 T 21-04-2016 VFU_RS03870 09c4041139cdb5e63314b6f0fd25bcb0 301 PANTHER PTHR30537 1 289 2.8E-80 T 21-04-2016 VFU_RS03870 09c4041139cdb5e63314b6f0fd25bcb0 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 3.7E-19 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS03870 09c4041139cdb5e63314b6f0fd25bcb0 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 6.7E-5 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS03870 09c4041139cdb5e63314b6f0fd25bcb0 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 6.7E-5 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS03870 09c4041139cdb5e63314b6f0fd25bcb0 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 6.7E-5 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS03870 09c4041139cdb5e63314b6f0fd25bcb0 301 Pfam PF03466 LysR substrate binding domain 88 288 6.1E-19 T 21-04-2016 IPR005119 LysR, substrate-binding VFU_RS03870 09c4041139cdb5e63314b6f0fd25bcb0 301 Gene3D G3DSA:3.40.190.10 91 176 7.2E-16 T 21-04-2016 VFU_RS03870 09c4041139cdb5e63314b6f0fd25bcb0 301 Gene3D G3DSA:1.10.10.10 3 82 4.3E-23 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS03870 09c4041139cdb5e63314b6f0fd25bcb0 301 SUPERFAMILY SSF53850 90 292 7.78E-20 T 21-04-2016 VFU_RS03870 09c4041139cdb5e63314b6f0fd25bcb0 301 PANTHER PTHR30537:SF26 1 289 2.8E-80 T 21-04-2016 VFU_RS15110 cf3c4f859d9c7790301fbd46c876f5cc 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 9 154 1.7E-37 T 21-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 VFU_RS15110 cf3c4f859d9c7790301fbd46c876f5cc 162 Pfam PF04093 rod shape-determining protein MreD 8 154 6.7E-42 T 21-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 VFU_RS15110 cf3c4f859d9c7790301fbd46c876f5cc 162 PANTHER PTHR37484 1 162 3.6E-68 T 21-04-2016 VFU_RS15110 cf3c4f859d9c7790301fbd46c876f5cc 162 PIRSF PIRSF018472 1 162 2.0E-43 T 21-04-2016 IPR026034 Cell shape-determining protein MreD, proteobacterial type VFU_RS01410 efeac268cfe1deaa3ae8cc4ceb1cafc3 304 PRINTS PR00073 Coprogen oxidase signature 166 195 1.9E-68 T 21-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VFU_RS01410 efeac268cfe1deaa3ae8cc4ceb1cafc3 304 PRINTS PR00073 Coprogen oxidase signature 31 47 1.9E-68 T 21-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VFU_RS01410 efeac268cfe1deaa3ae8cc4ceb1cafc3 304 PRINTS PR00073 Coprogen oxidase signature 238 265 1.9E-68 T 21-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VFU_RS01410 efeac268cfe1deaa3ae8cc4ceb1cafc3 304 PRINTS PR00073 Coprogen oxidase signature 266 292 1.9E-68 T 21-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VFU_RS01410 efeac268cfe1deaa3ae8cc4ceb1cafc3 304 PRINTS PR00073 Coprogen oxidase signature 94 118 1.9E-68 T 21-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VFU_RS01410 efeac268cfe1deaa3ae8cc4ceb1cafc3 304 PRINTS PR00073 Coprogen oxidase signature 129 151 1.9E-68 T 21-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VFU_RS01410 efeac268cfe1deaa3ae8cc4ceb1cafc3 304 Gene3D G3DSA:3.40.1500.10 5 304 1.5E-134 T 21-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VFU_RS01410 efeac268cfe1deaa3ae8cc4ceb1cafc3 304 PANTHER PTHR10755 6 304 6.0E-180 T 21-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VFU_RS01410 efeac268cfe1deaa3ae8cc4ceb1cafc3 304 PIRSF PIRSF000166 2 304 4.3E-126 T 21-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VFU_RS01410 efeac268cfe1deaa3ae8cc4ceb1cafc3 304 SUPERFAMILY SSF102886 5 304 1.7E-133 T 21-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VFU_RS01410 efeac268cfe1deaa3ae8cc4ceb1cafc3 304 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 170 194 - T 21-04-2016 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VFU_RS01410 efeac268cfe1deaa3ae8cc4ceb1cafc3 304 Pfam PF01218 Coproporphyrinogen III oxidase 9 304 2.2E-129 T 21-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VFU_RS01410 efeac268cfe1deaa3ae8cc4ceb1cafc3 304 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 281 56.049 T 21-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VFU_RS03525 fd6f9fd570640831f23ee71a36b01fee 571 Gene3D G3DSA:2.40.160.50 278 568 5.8E-21 T 21-04-2016 VFU_RS03525 fd6f9fd570640831f23ee71a36b01fee 571 Pfam PF01103 Surface antigen 319 568 1.1E-27 T 21-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 VFU_RS03525 fd6f9fd570640831f23ee71a36b01fee 571 PANTHER PTHR12815:SF12 1 571 1.3E-229 T 21-04-2016 VFU_RS03525 fd6f9fd570640831f23ee71a36b01fee 571 PANTHER PTHR12815 1 571 1.3E-229 T 21-04-2016 VFU_RS04565 e011112816d2491c2be2022027f658cb 98 Gene3D G3DSA:3.30.110.60 1 96 6.8E-32 T 21-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 VFU_RS04565 e011112816d2491c2be2022027f658cb 98 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 97 3.1E-37 T 21-04-2016 IPR017924 RNA-binding protein YhbY GO:0003723 VFU_RS04565 e011112816d2491c2be2022027f658cb 98 SUPERFAMILY SSF75471 1 94 7.46E-30 T 21-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 VFU_RS04565 e011112816d2491c2be2022027f658cb 98 PANTHER PTHR31846 1 98 1.1E-39 T 21-04-2016 VFU_RS04565 e011112816d2491c2be2022027f658cb 98 SMART SM01103 3 86 1.1E-39 T 21-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 VFU_RS04565 e011112816d2491c2be2022027f658cb 98 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 98 4.0E-41 T 21-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 VFU_RS04565 e011112816d2491c2be2022027f658cb 98 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 1.4E-20 T 21-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 VFU_RS10565 35131f8790b9c82343344fb31571334d 339 SUPERFAMILY SSF46565 284 336 6.93E-12 T 21-04-2016 IPR001623 DnaJ domain VFU_RS10565 35131f8790b9c82343344fb31571334d 339 SUPERFAMILY SSF81901 29 160 3.66E-23 T 21-04-2016 VFU_RS10565 35131f8790b9c82343344fb31571334d 339 PANTHER PTHR11102 31 157 3.0E-19 T 21-04-2016 VFU_RS10565 35131f8790b9c82343344fb31571334d 339 PANTHER PTHR11102 249 264 3.0E-19 T 21-04-2016 VFU_RS10565 35131f8790b9c82343344fb31571334d 339 Gene3D G3DSA:1.10.287.110 284 335 5.5E-12 T 21-04-2016 IPR001623 DnaJ domain VFU_RS10565 35131f8790b9c82343344fb31571334d 339 Gene3D G3DSA:1.25.40.10 28 146 1.9E-22 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VFU_RS10565 35131f8790b9c82343344fb31571334d 339 PANTHER PTHR11102:SF11 31 157 3.0E-19 T 21-04-2016 VFU_RS10565 35131f8790b9c82343344fb31571334d 339 PANTHER PTHR11102:SF11 249 264 3.0E-19 T 21-04-2016 VFU_RS10565 35131f8790b9c82343344fb31571334d 339 Pfam PF08238 Sel1 repeat 74 101 0.0062 T 21-04-2016 IPR006597 Sel1-like repeat VFU_RS10565 35131f8790b9c82343344fb31571334d 339 Pfam PF08238 Sel1 repeat 130 142 17.0 T 21-04-2016 IPR006597 Sel1-like repeat VFU_RS10565 35131f8790b9c82343344fb31571334d 339 Pfam PF08238 Sel1 repeat 38 71 1.6E-5 T 21-04-2016 IPR006597 Sel1-like repeat VFU_RS10565 35131f8790b9c82343344fb31571334d 339 SMART SM00671 72 107 0.073 T 21-04-2016 IPR006597 Sel1-like repeat VFU_RS10565 35131f8790b9c82343344fb31571334d 339 SMART SM00671 36 71 1.5E-6 T 21-04-2016 IPR006597 Sel1-like repeat VFU_RS10565 35131f8790b9c82343344fb31571334d 339 SMART SM00671 108 143 370.0 T 21-04-2016 IPR006597 Sel1-like repeat VFU_RS09605 6ce9c33ed9e4643358bebc376d7920c8 453 SUPERFAMILY SSF55961 160 441 7.06E-60 T 21-04-2016 VFU_RS09605 6ce9c33ed9e4643358bebc376d7920c8 453 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 57 72 5.3E-59 T 21-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 VFU_RS09605 6ce9c33ed9e4643358bebc376d7920c8 453 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 27 52 5.3E-59 T 21-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 VFU_RS09605 6ce9c33ed9e4643358bebc376d7920c8 453 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 78 98 5.3E-59 T 21-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 VFU_RS09605 6ce9c33ed9e4643358bebc376d7920c8 453 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 99 119 5.3E-59 T 21-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 VFU_RS09605 6ce9c33ed9e4643358bebc376d7920c8 453 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 184 206 5.3E-59 T 21-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 VFU_RS09605 6ce9c33ed9e4643358bebc376d7920c8 453 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 143 169 5.3E-59 T 21-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 VFU_RS09605 6ce9c33ed9e4643358bebc376d7920c8 453 Gene3D G3DSA:3.90.380.10 140 440 1.6E-106 T 21-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 VFU_RS09605 6ce9c33ed9e4643358bebc376d7920c8 453 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 85 108 - T 21-04-2016 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 VFU_RS09605 6ce9c33ed9e4643358bebc376d7920c8 453 PANTHER PTHR21266:SF30 19 300 6.5E-106 T 21-04-2016 VFU_RS09605 6ce9c33ed9e4643358bebc376d7920c8 453 PANTHER PTHR21266 19 300 6.5E-106 T 21-04-2016 VFU_RS09605 6ce9c33ed9e4643358bebc376d7920c8 453 Pfam PF00355 Rieske [2Fe-2S] domain 43 125 2.5E-22 T 21-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 VFU_RS09605 6ce9c33ed9e4643358bebc376d7920c8 453 Hamap MF_01648 3-phenylpropionate/cinnamic acid dioxygenase subunit alpha [hcaE]. 1 453 93.32 T 21-04-2016 IPR020875 3-phenylpropionate/cinnamic acid dioxygenase, alpha subunit GO:0005506|GO:0008695|GO:0019439|GO:0055114 KEGG: 00360+1.14.12.19|MetaCyc: PWY-6690|UniPathway: UPA00714 VFU_RS09605 6ce9c33ed9e4643358bebc376d7920c8 453 SUPERFAMILY SSF50022 5 157 5.5E-50 T 21-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 VFU_RS09605 6ce9c33ed9e4643358bebc376d7920c8 453 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 164 433 2.2E-42 T 21-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 VFU_RS09605 6ce9c33ed9e4643358bebc376d7920c8 453 Gene3D G3DSA:2.102.10.10 36 139 2.3E-16 T 21-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 VFU_RS08545 2944518b7d101e67bdd23fe3320ef9b0 460 SUPERFAMILY SSF46626 318 460 9.17E-26 T 21-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VFU_RS08545 2944518b7d101e67bdd23fe3320ef9b0 460 PIRSF PIRSF028099 6 460 1.0E-184 T 21-04-2016 IPR010538 Di-haem oxidoreductase, putative peroxidase VFU_RS08545 2944518b7d101e67bdd23fe3320ef9b0 460 Gene3D G3DSA:1.10.760.10 322 460 9.8E-20 T 21-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VFU_RS08545 2944518b7d101e67bdd23fe3320ef9b0 460 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 22 460 7.2E-140 T 21-04-2016 IPR010538 Di-haem oxidoreductase, putative peroxidase VFU_RS08545 2944518b7d101e67bdd23fe3320ef9b0 460 PANTHER PTHR30600:SF4 176 220 1.4E-163 T 21-04-2016 VFU_RS08545 2944518b7d101e67bdd23fe3320ef9b0 460 PANTHER PTHR30600:SF4 245 460 1.4E-163 T 21-04-2016 VFU_RS08545 2944518b7d101e67bdd23fe3320ef9b0 460 PANTHER PTHR30600:SF4 12 97 1.4E-163 T 21-04-2016 VFU_RS08545 2944518b7d101e67bdd23fe3320ef9b0 460 PANTHER PTHR30600 176 220 1.4E-163 T 21-04-2016 VFU_RS08545 2944518b7d101e67bdd23fe3320ef9b0 460 PANTHER PTHR30600 245 460 1.4E-163 T 21-04-2016 VFU_RS08545 2944518b7d101e67bdd23fe3320ef9b0 460 PANTHER PTHR30600 12 97 1.4E-163 T 21-04-2016 VFU_RS01530 03162bb1f549590d828ff152dd3c15b7 313 Pfam PF01063 Amino-transferase class IV 36 268 2.1E-47 T 21-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 VFU_RS01530 03162bb1f549590d828ff152dd3c15b7 313 PANTHER PTHR11825 1 306 1.6E-131 T 21-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 VFU_RS01530 03162bb1f549590d828ff152dd3c15b7 313 PANTHER PTHR11825:SF7 1 306 1.6E-131 T 21-04-2016 VFU_RS01530 03162bb1f549590d828ff152dd3c15b7 313 Gene3D G3DSA:3.30.470.10 7 130 4.6E-44 T 21-04-2016 VFU_RS01530 03162bb1f549590d828ff152dd3c15b7 313 Gene3D G3DSA:3.20.10.10 134 295 1.4E-59 T 21-04-2016 VFU_RS01530 03162bb1f549590d828ff152dd3c15b7 313 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 223 - T 21-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 VFU_RS01530 03162bb1f549590d828ff152dd3c15b7 313 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 10 307 1.3E-143 T 21-04-2016 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|UniPathway: UPA00047|UniPathway: UPA00048|UniPathway: UPA00049 VFU_RS01530 03162bb1f549590d828ff152dd3c15b7 313 SUPERFAMILY SSF56752 7 307 1.22E-105 T 21-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 VFU_RS00815 e5a86498d2494e43a4f7413970e09bf9 334 PANTHER PTHR10366:SF77 2 332 9.3E-180 T 21-04-2016 VFU_RS00815 e5a86498d2494e43a4f7413970e09bf9 334 Gene3D G3DSA:3.40.50.720 1 181 1.3E-54 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS00815 e5a86498d2494e43a4f7413970e09bf9 334 PRINTS PR01713 Nucleotide sugar epimerase signature 215 230 3.6E-29 T 21-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 VFU_RS00815 e5a86498d2494e43a4f7413970e09bf9 334 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 3.6E-29 T 21-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 VFU_RS00815 e5a86498d2494e43a4f7413970e09bf9 334 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 3.6E-29 T 21-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 VFU_RS00815 e5a86498d2494e43a4f7413970e09bf9 334 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 3.6E-29 T 21-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 VFU_RS00815 e5a86498d2494e43a4f7413970e09bf9 334 Gene3D G3DSA:3.90.25.10 263 332 1.0E-27 T 21-04-2016 VFU_RS00815 e5a86498d2494e43a4f7413970e09bf9 334 Gene3D G3DSA:3.90.25.10 182 222 1.0E-27 T 21-04-2016 VFU_RS00815 e5a86498d2494e43a4f7413970e09bf9 334 SUPERFAMILY SSF51735 1 332 7.61E-91 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS00815 e5a86498d2494e43a4f7413970e09bf9 334 PANTHER PTHR10366 2 332 9.3E-180 T 21-04-2016 VFU_RS00815 e5a86498d2494e43a4f7413970e09bf9 334 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 322 4.0E-57 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS03955 55f655d6b1fed9eaaa374f9c2e9128bd 200 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 188 2.4E-98 T 21-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS03955 55f655d6b1fed9eaaa374f9c2e9128bd 200 PANTHER PTHR11670 1 200 5.5E-120 T 21-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS03955 55f655d6b1fed9eaaa374f9c2e9128bd 200 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 199 44.162 T 21-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS03955 55f655d6b1fed9eaaa374f9c2e9128bd 200 PANTHER PTHR11670:SF27 1 200 5.5E-120 T 21-04-2016 VFU_RS03955 55f655d6b1fed9eaaa374f9c2e9128bd 200 SUPERFAMILY SSF52016 2 196 7.85E-61 T 21-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VFU_RS03955 55f655d6b1fed9eaaa374f9c2e9128bd 200 Gene3D G3DSA:3.20.19.10 1 194 5.9E-50 T 21-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VFU_RS03955 55f655d6b1fed9eaaa374f9c2e9128bd 200 Pfam PF00694 Aconitase C-terminal domain 1 125 5.7E-39 T 21-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VFU_RS07810 d655dfd772b0d5ea2191bd1dbe08fcf8 313 SUPERFAMILY SSF46689 228 311 3.78E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS07810 d655dfd772b0d5ea2191bd1dbe08fcf8 313 SUPERFAMILY SSF52540 17 256 3.0E-62 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS07810 d655dfd772b0d5ea2191bd1dbe08fcf8 313 Gene3D G3DSA:1.10.8.60 191 264 4.0E-21 T 21-04-2016 VFU_RS07810 d655dfd772b0d5ea2191bd1dbe08fcf8 313 SMART SM00382 38 182 4.5E-7 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS07810 d655dfd772b0d5ea2191bd1dbe08fcf8 313 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 292 312 7.9E-8 T 21-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VFU_RS07810 d655dfd772b0d5ea2191bd1dbe08fcf8 313 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 275 292 7.9E-8 T 21-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VFU_RS07810 d655dfd772b0d5ea2191bd1dbe08fcf8 313 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 228 237 - T 21-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VFU_RS07810 d655dfd772b0d5ea2191bd1dbe08fcf8 313 Pfam PF00158 Sigma-54 interaction domain 18 184 4.5E-63 T 21-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VFU_RS07810 d655dfd772b0d5ea2191bd1dbe08fcf8 313 Gene3D G3DSA:3.40.50.300 16 190 5.7E-50 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS07810 d655dfd772b0d5ea2191bd1dbe08fcf8 313 PANTHER PTHR32071 17 311 3.8E-130 T 21-04-2016 VFU_RS07810 d655dfd772b0d5ea2191bd1dbe08fcf8 313 Gene3D G3DSA:1.10.10.60 270 311 4.2E-12 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS07810 d655dfd772b0d5ea2191bd1dbe08fcf8 313 Pfam PF02954 Bacterial regulatory protein, Fis family 272 309 1.2E-10 T 21-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VFU_RS05065 5f3133070a68dfad501f9d706bcfa133 210 PIRSF PIRSF006102 3 210 3.9E-72 T 21-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 VFU_RS05065 5f3133070a68dfad501f9d706bcfa133 210 PANTHER PTHR30586:SF1 2 210 6.8E-146 T 21-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 VFU_RS05065 5f3133070a68dfad501f9d706bcfa133 210 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 37.137 T 21-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 VFU_RS05065 5f3133070a68dfad501f9d706bcfa133 210 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 195 2.6E-62 T 21-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 VFU_RS05065 5f3133070a68dfad501f9d706bcfa133 210 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 3 207 6.8E-109 T 21-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 VFU_RS05065 5f3133070a68dfad501f9d706bcfa133 210 PANTHER PTHR30586 2 210 6.8E-146 T 21-04-2016 VFU_RS00490 b629f9ffccdef1ea4a8b21bb21098c27 360 Pfam PF01595 Domain of unknown function DUF21 9 177 7.6E-29 T 21-04-2016 IPR002550 Domain of unknown function DUF21 VFU_RS00490 b629f9ffccdef1ea4a8b21bb21098c27 360 PANTHER PTHR22777:SF4 1 336 6.5E-176 T 21-04-2016 VFU_RS00490 b629f9ffccdef1ea4a8b21bb21098c27 360 SUPERFAMILY SSF54631 181 315 2.59E-23 T 21-04-2016 VFU_RS00490 b629f9ffccdef1ea4a8b21bb21098c27 360 Pfam PF00571 CBS domain 264 313 4.7E-5 T 21-04-2016 IPR000644 CBS domain VFU_RS00490 b629f9ffccdef1ea4a8b21bb21098c27 360 Gene3D G3DSA:3.10.580.10 180 315 5.3E-13 T 21-04-2016 VFU_RS00490 b629f9ffccdef1ea4a8b21bb21098c27 360 PANTHER PTHR22777 1 336 6.5E-176 T 21-04-2016 VFU_RS10610 1b76eb86a6cbef51cacd56056d37df68 495 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 264 271 - T 21-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 VFU_RS10610 1b76eb86a6cbef51cacd56056d37df68 495 PANTHER PTHR11699 1 492 1.3E-278 T 21-04-2016 VFU_RS10610 1b76eb86a6cbef51cacd56056d37df68 495 Pfam PF00171 Aldehyde dehydrogenase family 31 487 2.0E-175 T 21-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 VFU_RS10610 1b76eb86a6cbef51cacd56056d37df68 495 PANTHER PTHR11699:SF210 1 492 1.3E-278 T 21-04-2016 VFU_RS10610 1b76eb86a6cbef51cacd56056d37df68 495 SUPERFAMILY SSF53720 7 492 1.06E-171 T 21-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 VFU_RS10610 1b76eb86a6cbef51cacd56056d37df68 495 Gene3D G3DSA:3.40.605.10 19 278 1.7E-94 T 21-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 VFU_RS10610 1b76eb86a6cbef51cacd56056d37df68 495 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 293 304 - T 21-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 VFU_RS10610 1b76eb86a6cbef51cacd56056d37df68 495 Gene3D G3DSA:3.40.309.10 279 463 4.2E-74 T 21-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 VFU_RS05350 3e492d52bcc87265bd90ac0211e97b75 287 Gene3D G3DSA:3.60.10.10 59 278 5.1E-10 T 21-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VFU_RS05350 3e492d52bcc87265bd90ac0211e97b75 287 Hamap MF_01119 UPF0294 protein YafD [yafD]. 1 279 52.22 T 21-04-2016 IPR022958 Uncharacterised protein family UPF0294 VFU_RS05350 3e492d52bcc87265bd90ac0211e97b75 287 SUPERFAMILY SSF56219 59 278 8.9E-27 T 21-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VFU_RS05350 3e492d52bcc87265bd90ac0211e97b75 287 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 67 271 4.1E-14 T 21-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VFU_RS13180 b3c9a42f485664e4a5cf590e71213e3a 519 Gene3D G3DSA:3.40.190.10 19 147 4.8E-22 T 21-04-2016 VFU_RS13180 b3c9a42f485664e4a5cf590e71213e3a 519 SMART SM00062 43 279 4.7E-22 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VFU_RS13180 b3c9a42f485664e4a5cf590e71213e3a 519 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 278 1.5E-29 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VFU_RS13180 b3c9a42f485664e4a5cf590e71213e3a 519 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 9 474 48.394 T 21-04-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 VFU_RS13180 b3c9a42f485664e4a5cf590e71213e3a 519 PANTHER PTHR21666:SF215 284 501 5.9E-121 T 21-04-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 VFU_RS13180 b3c9a42f485664e4a5cf590e71213e3a 519 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 320 348 - T 21-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VFU_RS13180 b3c9a42f485664e4a5cf590e71213e3a 519 Gene3D G3DSA:1.10.530.10 297 468 6.7E-37 T 21-04-2016 VFU_RS13180 b3c9a42f485664e4a5cf590e71213e3a 519 SUPERFAMILY SSF53955 257 408 6.61E-36 T 21-04-2016 IPR023346 Lysozyme-like domain VFU_RS13180 b3c9a42f485664e4a5cf590e71213e3a 519 SUPERFAMILY SSF53955 443 460 6.61E-36 T 21-04-2016 IPR023346 Lysozyme-like domain VFU_RS13180 b3c9a42f485664e4a5cf590e71213e3a 519 SUPERFAMILY SSF53850 44 278 5.69E-36 T 21-04-2016 VFU_RS13180 b3c9a42f485664e4a5cf590e71213e3a 519 Pfam PF01464 Transglycosylase SLT domain 309 409 3.9E-21 T 21-04-2016 IPR008258 Transglycosylase SLT domain 1 VFU_RS13180 b3c9a42f485664e4a5cf590e71213e3a 519 PANTHER PTHR21666 284 501 5.9E-121 T 21-04-2016 VFU_RS07865 b818177c6790cf6f7d599b6b86bc1e58 188 Pfam PF10400 Virulence activator alpha C-term 95 173 8.5E-16 T 21-04-2016 IPR018309 Transcription regulator PadR, C-terminal VFU_RS07865 b818177c6790cf6f7d599b6b86bc1e58 188 Gene3D G3DSA:1.10.10.10 4 86 4.7E-24 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS07865 b818177c6790cf6f7d599b6b86bc1e58 188 PANTHER PTHR33169 4 173 1.9E-35 T 21-04-2016 VFU_RS07865 b818177c6790cf6f7d599b6b86bc1e58 188 PANTHER PTHR33169:SF4 4 173 1.9E-35 T 21-04-2016 VFU_RS07865 b818177c6790cf6f7d599b6b86bc1e58 188 SUPERFAMILY SSF46785 4 176 8.6E-35 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS07865 b818177c6790cf6f7d599b6b86bc1e58 188 Pfam PF03551 Transcriptional regulator PadR-like family 8 80 5.3E-15 T 21-04-2016 IPR005149 Transcription regulator PadR, N-terminal VFU_RS08275 018533c1b8717bfac0ee80febb52d7e9 418 PANTHER PTHR35334 1 418 8.1E-231 T 21-04-2016 VFU_RS08275 018533c1b8717bfac0ee80febb52d7e9 418 PANTHER PTHR35334:SF2 1 418 8.1E-231 T 21-04-2016 VFU_RS08275 018533c1b8717bfac0ee80febb52d7e9 418 Pfam PF03222 Tryptophan/tyrosine permease family 31 391 1.2E-11 T 21-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 VFU_RS06955 0512031d999ca51e944b32c23080de12 89 PANTHER PTHR34040 1 89 3.6E-33 T 21-04-2016 VFU_RS06955 0512031d999ca51e944b32c23080de12 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 7.1E-26 T 21-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VFU_RS06955 0512031d999ca51e944b32c23080de12 89 PANTHER PTHR34040:SF2 1 89 3.6E-33 T 21-04-2016 VFU_RS06955 0512031d999ca51e944b32c23080de12 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 1.0E-12 T 21-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VFU_RS06955 0512031d999ca51e944b32c23080de12 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 1.0E-12 T 21-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VFU_RS06955 0512031d999ca51e944b32c23080de12 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 1.0E-12 T 21-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VFU_RS06955 0512031d999ca51e944b32c23080de12 89 PIRSF PIRSF004669 1 89 5.4E-26 T 21-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VFU_RS06955 0512031d999ca51e944b32c23080de12 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 2.0E-29 T 21-04-2016 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 VFU_RS12530 37f44bd7344ccd0e19f0e6e4daff7f1e 765 Pfam PF01228 Glycine radical 630 746 9.7E-42 T 21-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 VFU_RS12530 37f44bd7344ccd0e19f0e6e4daff7f1e 765 Gene3D G3DSA:3.20.70.20 8 763 0.0 T 21-04-2016 VFU_RS12530 37f44bd7344ccd0e19f0e6e4daff7f1e 765 SUPERFAMILY SSF51998 7 763 9.77E-276 T 21-04-2016 VFU_RS12530 37f44bd7344ccd0e19f0e6e4daff7f1e 765 ProSitePatterns PS00850 Glycine radical domain signature. 735 743 - T 21-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VFU_RS12530 37f44bd7344ccd0e19f0e6e4daff7f1e 765 PANTHER PTHR30191:SF7 1 765 0.0 T 21-04-2016 VFU_RS12530 37f44bd7344ccd0e19f0e6e4daff7f1e 765 PIRSF PIRSF000379 8 765 0.0 T 21-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 VFU_RS12530 37f44bd7344ccd0e19f0e6e4daff7f1e 765 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 11 765 0.0 T 21-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 VFU_RS12530 37f44bd7344ccd0e19f0e6e4daff7f1e 765 PANTHER PTHR30191 1 765 0.0 T 21-04-2016 VFU_RS12530 37f44bd7344ccd0e19f0e6e4daff7f1e 765 Pfam PF02901 Pyruvate formate lyase-like 26 614 5.9E-193 T 21-04-2016 IPR004184 Pyruvate formate lyase domain GO:0003824 VFU_RS03335 9ff8ee5bd2872c580cec9d249346997f 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 20.017 T 21-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS03335 9ff8ee5bd2872c580cec9d249346997f 105 SUPERFAMILY SSF50104 4 101 1.15E-33 T 21-04-2016 IPR008991 Translation protein SH3-like domain VFU_RS03335 9ff8ee5bd2872c580cec9d249346997f 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 1.7E-39 T 21-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS03335 9ff8ee5bd2872c580cec9d249346997f 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 102 7.4E-23 T 21-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS03335 9ff8ee5bd2872c580cec9d249346997f 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 21-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS03335 9ff8ee5bd2872c580cec9d249346997f 105 Pfam PF00467 KOW motif 8 37 8.0E-6 T 21-04-2016 IPR005824 KOW VFU_RS03335 9ff8ee5bd2872c580cec9d249346997f 105 SMART SM00739 4 31 3.4E-4 T 21-04-2016 IPR005824 KOW VFU_RS03335 9ff8ee5bd2872c580cec9d249346997f 105 PANTHER PTHR12903 4 101 4.2E-46 T 21-04-2016 VFU_RS03335 9ff8ee5bd2872c580cec9d249346997f 105 Gene3D G3DSA:2.30.30.30 3 92 5.2E-22 T 21-04-2016 IPR014722 Ribosomal protein L2 domain 2 VFU_RS11340 dd607c9efa0a9a475ef12df139b958fc 259 SMART SM01134 73 234 2.4E-68 T 21-04-2016 VFU_RS11340 dd607c9efa0a9a475ef12df139b958fc 259 Gene3D G3DSA:1.10.10.10 1 49 4.3E-6 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS11340 dd607c9efa0a9a475ef12df139b958fc 259 SUPERFAMILY SSF100950 74 234 1.93E-31 T 21-04-2016 VFU_RS11340 dd607c9efa0a9a475ef12df139b958fc 259 SMART SM00420 6 58 1.7E-10 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VFU_RS11340 dd607c9efa0a9a475ef12df139b958fc 259 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 8.8E-14 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VFU_RS11340 dd607c9efa0a9a475ef12df139b958fc 259 Pfam PF00455 DeoR C terminal sensor domain 75 233 5.7E-52 T 21-04-2016 IPR014036 DeoR C-terminal sensor domain VFU_RS11340 dd607c9efa0a9a475ef12df139b958fc 259 PANTHER PTHR30363:SF1 1 254 4.1E-77 T 21-04-2016 VFU_RS11340 dd607c9efa0a9a475ef12df139b958fc 259 Gene3D G3DSA:3.40.50.1360 76 215 8.3E-14 T 21-04-2016 VFU_RS11340 dd607c9efa0a9a475ef12df139b958fc 259 PANTHER PTHR30363 1 254 4.1E-77 T 21-04-2016 VFU_RS11340 dd607c9efa0a9a475ef12df139b958fc 259 SUPERFAMILY SSF46785 4 63 8.19E-11 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS08075 fcbf630a3096f3735a1a60bfcdb21f1b 266 PANTHER PTHR30028 1 259 1.1E-64 T 21-04-2016 VFU_RS08075 fcbf630a3096f3735a1a60bfcdb21f1b 266 Pfam PF03649 Uncharacterised protein family (UPF0014) 9 247 1.2E-73 T 21-04-2016 IPR005226 UPF0014 family VFU_RS08075 fcbf630a3096f3735a1a60bfcdb21f1b 266 PANTHER PTHR30028:SF0 1 259 1.1E-64 T 21-04-2016 IPR005226 UPF0014 family VFU_RS13850 99ff355b6cec2bc7ec306f1c5d0e8fd1 352 Pfam PF13181 Tetratricopeptide repeat 120 149 0.04 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VFU_RS13850 99ff355b6cec2bc7ec306f1c5d0e8fd1 352 Pfam PF13181 Tetratricopeptide repeat 279 306 0.0092 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VFU_RS13850 99ff355b6cec2bc7ec306f1c5d0e8fd1 352 Pfam PF13181 Tetratricopeptide repeat 87 118 6.6E-4 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VFU_RS13850 99ff355b6cec2bc7ec306f1c5d0e8fd1 352 Pfam PF13181 Tetratricopeptide repeat 182 212 0.041 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VFU_RS13850 99ff355b6cec2bc7ec306f1c5d0e8fd1 352 SUPERFAMILY SSF48452 170 313 4.55E-23 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VFU_RS13850 99ff355b6cec2bc7ec306f1c5d0e8fd1 352 PANTHER PTHR23083 175 314 6.6E-31 T 21-04-2016 VFU_RS13850 99ff355b6cec2bc7ec306f1c5d0e8fd1 352 PANTHER PTHR23083 55 147 6.6E-31 T 21-04-2016 VFU_RS13850 99ff355b6cec2bc7ec306f1c5d0e8fd1 352 SMART SM00028 214 247 0.0034 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VFU_RS13850 99ff355b6cec2bc7ec306f1c5d0e8fd1 352 SMART SM00028 180 213 0.53 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VFU_RS13850 99ff355b6cec2bc7ec306f1c5d0e8fd1 352 SMART SM00028 119 152 47.0 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VFU_RS13850 99ff355b6cec2bc7ec306f1c5d0e8fd1 352 SMART SM00028 85 118 0.18 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VFU_RS13850 99ff355b6cec2bc7ec306f1c5d0e8fd1 352 SMART SM00028 278 311 4.0E-5 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VFU_RS13850 99ff355b6cec2bc7ec306f1c5d0e8fd1 352 SUPERFAMILY SSF48452 53 150 7.01E-12 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VFU_RS13850 99ff355b6cec2bc7ec306f1c5d0e8fd1 352 Pfam PF07719 Tetratricopeptide repeat 215 247 1.5E-5 T 21-04-2016 IPR013105 Tetratricopeptide repeat 2 VFU_RS13850 99ff355b6cec2bc7ec306f1c5d0e8fd1 352 Gene3D G3DSA:1.25.40.10 54 317 3.7E-37 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VFU_RS00150 268ce2b97b8249bdf1bc9d4fbc62bee0 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 43.479 T 21-04-2016 IPR022894 Oligoribonuclease GO:0016788 VFU_RS00150 268ce2b97b8249bdf1bc9d4fbc62bee0 181 Pfam PF00929 Exonuclease 9 170 3.1E-35 T 21-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VFU_RS00150 268ce2b97b8249bdf1bc9d4fbc62bee0 181 SMART SM00479 7 180 1.2E-20 T 21-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VFU_RS00150 268ce2b97b8249bdf1bc9d4fbc62bee0 181 SUPERFAMILY SSF53098 3 179 9.83E-51 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VFU_RS00150 268ce2b97b8249bdf1bc9d4fbc62bee0 181 Gene3D G3DSA:3.30.420.10 4 179 6.2E-76 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VFU_RS00150 268ce2b97b8249bdf1bc9d4fbc62bee0 181 PANTHER PTHR11046:SF1 5 181 1.2E-121 T 21-04-2016 VFU_RS00150 268ce2b97b8249bdf1bc9d4fbc62bee0 181 PANTHER PTHR11046 5 181 1.2E-121 T 21-04-2016 VFU_RS06460 f34bbf5ccb9e37e92abcb15cd87ac657 519 PANTHER PTHR11814:SF71 4 503 3.1E-178 T 21-04-2016 VFU_RS06460 f34bbf5ccb9e37e92abcb15cd87ac657 519 Pfam PF00916 Sulfate permease family 13 374 1.3E-55 T 21-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 VFU_RS06460 f34bbf5ccb9e37e92abcb15cd87ac657 519 SUPERFAMILY SSF52091 415 498 6.08E-11 T 21-04-2016 IPR002645 STAS domain VFU_RS06460 f34bbf5ccb9e37e92abcb15cd87ac657 519 SUPERFAMILY SSF81665 309 401 2.48E-5 T 21-04-2016 VFU_RS06460 f34bbf5ccb9e37e92abcb15cd87ac657 519 SUPERFAMILY SSF81665 119 197 2.48E-5 T 21-04-2016 VFU_RS06460 f34bbf5ccb9e37e92abcb15cd87ac657 519 Gene3D G3DSA:3.30.750.24 414 506 2.8E-9 T 21-04-2016 IPR002645 STAS domain VFU_RS06460 f34bbf5ccb9e37e92abcb15cd87ac657 519 PANTHER PTHR11814 4 503 3.1E-178 T 21-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 VFU_RS06460 f34bbf5ccb9e37e92abcb15cd87ac657 519 Pfam PF01740 STAS domain 416 503 2.3E-6 T 21-04-2016 IPR002645 STAS domain VFU_RS10765 4394ad1e91f2cc0ff91fd8a294743c10 315 SMART SM00363 3 73 3.8E-9 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VFU_RS10765 4394ad1e91f2cc0ff91fd8a294743c10 315 SUPERFAMILY SSF55120 68 236 5.96E-42 T 21-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS10765 4394ad1e91f2cc0ff91fd8a294743c10 315 Pfam PF01479 S4 domain 4 42 6.2E-10 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VFU_RS10765 4394ad1e91f2cc0ff91fd8a294743c10 315 PANTHER PTHR21600:SF2 1 309 9.3E-101 T 21-04-2016 VFU_RS10765 4394ad1e91f2cc0ff91fd8a294743c10 315 Gene3D G3DSA:3.10.290.10 3 62 1.2E-15 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VFU_RS10765 4394ad1e91f2cc0ff91fd8a294743c10 315 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 106 120 - T 21-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VFU_RS10765 4394ad1e91f2cc0ff91fd8a294743c10 315 PANTHER PTHR21600 1 309 9.3E-101 T 21-04-2016 VFU_RS10765 4394ad1e91f2cc0ff91fd8a294743c10 315 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 72 232 3.9E-55 T 21-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VFU_RS10765 4394ad1e91f2cc0ff91fd8a294743c10 315 SUPERFAMILY SSF55174 4 96 4.21E-12 T 21-04-2016 VFU_RS10765 4394ad1e91f2cc0ff91fd8a294743c10 315 Pfam PF00849 RNA pseudouridylate synthase 68 206 7.7E-17 T 21-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS13570 75a9c6fba7c466a3457cd73d2c93d354 606 SUPERFAMILY SSF82866 401 597 8.24E-46 T 21-04-2016 VFU_RS13570 75a9c6fba7c466a3457cd73d2c93d354 606 Pfam PF07549 SecD/SecF GG Motif 104 130 2.8E-7 T 21-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VFU_RS13570 75a9c6fba7c466a3457cd73d2c93d354 606 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 336 585 1.8E-80 T 21-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VFU_RS13570 75a9c6fba7c466a3457cd73d2c93d354 606 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 605 48.066 T 21-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 VFU_RS13570 75a9c6fba7c466a3457cd73d2c93d354 606 Gene3D G3DSA:1.20.1640.10 400 598 3.3E-26 T 21-04-2016 VFU_RS13570 75a9c6fba7c466a3457cd73d2c93d354 606 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 112 592 5.6E-149 T 21-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 VFU_RS13570 75a9c6fba7c466a3457cd73d2c93d354 606 Pfam PF13721 SecD export protein N-terminal TM region 1 92 1.4E-28 T 21-04-2016 IPR027398 SecD export protein N-terminal TM domain VFU_RS13570 75a9c6fba7c466a3457cd73d2c93d354 606 PANTHER PTHR30081:SF1 1 162 1.2E-222 T 21-04-2016 VFU_RS13570 75a9c6fba7c466a3457cd73d2c93d354 606 PANTHER PTHR30081:SF1 304 604 1.2E-222 T 21-04-2016 VFU_RS13570 75a9c6fba7c466a3457cd73d2c93d354 606 PANTHER PTHR30081:SF1 215 273 1.2E-222 T 21-04-2016 VFU_RS13570 75a9c6fba7c466a3457cd73d2c93d354 606 PANTHER PTHR30081 1 162 1.2E-222 T 21-04-2016 VFU_RS13570 75a9c6fba7c466a3457cd73d2c93d354 606 PANTHER PTHR30081 304 604 1.2E-222 T 21-04-2016 VFU_RS13570 75a9c6fba7c466a3457cd73d2c93d354 606 PANTHER PTHR30081 215 273 1.2E-222 T 21-04-2016 VFU_RS13570 75a9c6fba7c466a3457cd73d2c93d354 606 Pfam PF02355 Protein export membrane protein 424 585 2.2E-19 T 21-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VFU_RS12625 72faa14446dd49f17158d51afaf3c92c 1500 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 71 143 2.1E-27 T 21-04-2016 IPR020012 Motility protein FimV, N-terminal VFU_RS12625 72faa14446dd49f17158d51afaf3c92c 1500 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 1454 1495 5.1E-15 T 21-04-2016 IPR020011 Motility protein FimV, C-terminal VFU_RS12625 72faa14446dd49f17158d51afaf3c92c 1500 ProSitePatterns PS00018 EF-hand calcium-binding domain. 436 448 - T 21-04-2016 IPR018247 EF-Hand 1, calcium-binding site VFU_RS13925 641c258d53da3b44cf599c0b0cb6d567 561 Gene3D G3DSA:3.40.50.980 19 187 1.4E-29 T 21-04-2016 VFU_RS13925 641c258d53da3b44cf599c0b0cb6d567 561 ProSitePatterns PS00455 Putative AMP-binding domain signature. 182 193 - T 21-04-2016 IPR020845 AMP-binding, conserved site VFU_RS13925 641c258d53da3b44cf599c0b0cb6d567 561 Gene3D G3DSA:3.40.50.980 188 368 3.8E-25 T 21-04-2016 VFU_RS13925 641c258d53da3b44cf599c0b0cb6d567 561 PANTHER PTHR24096:SF249 1 557 6.2E-255 T 21-04-2016 VFU_RS13925 641c258d53da3b44cf599c0b0cb6d567 561 PANTHER PTHR24096 1 557 6.2E-255 T 21-04-2016 VFU_RS13925 641c258d53da3b44cf599c0b0cb6d567 561 SUPERFAMILY SSF56801 18 547 6.15E-112 T 21-04-2016 VFU_RS13925 641c258d53da3b44cf599c0b0cb6d567 561 Pfam PF00501 AMP-binding enzyme 23 440 5.7E-86 T 21-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VFU_RS13925 641c258d53da3b44cf599c0b0cb6d567 561 Gene3D G3DSA:2.30.38.10 379 434 7.3E-18 T 21-04-2016 VFU_RS09815 9354c87c21fea5b28c6d884e893e313d 251 PANTHER PTHR24220:SF490 12 251 7.5E-199 T 21-04-2016 VFU_RS09815 9354c87c21fea5b28c6d884e893e313d 251 SUPERFAMILY SSF52540 10 244 1.52E-82 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS09815 9354c87c21fea5b28c6d884e893e313d 251 PIRSF PIRSF039085 7 250 6.4E-112 T 21-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VFU_RS09815 9354c87c21fea5b28c6d884e893e313d 251 Gene3D G3DSA:3.40.50.300 10 245 1.4E-86 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS09815 9354c87c21fea5b28c6d884e893e313d 251 PANTHER PTHR24220 12 251 7.5E-199 T 21-04-2016 VFU_RS09815 9354c87c21fea5b28c6d884e893e313d 251 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS09815 9354c87c21fea5b28c6d884e893e313d 251 Pfam PF00005 ABC transporter 26 174 2.1E-39 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS09815 9354c87c21fea5b28c6d884e893e313d 251 SMART SM00382 35 222 1.7E-14 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS13100 e870a157e93a17ab9ab1701d6896da6f 103 PIRSF PIRSF006257 1 103 1.1E-37 T 21-04-2016 IPR007384 Protein of unknown function UCP006257 VFU_RS13100 e870a157e93a17ab9ab1701d6896da6f 103 Gene3D G3DSA:1.20.1440.40 3 101 1.2E-35 T 21-04-2016 IPR023376 YqcC-like domain VFU_RS13100 e870a157e93a17ab9ab1701d6896da6f 103 Pfam PF04287 tRNA pseudouridine synthase C 7 100 2.4E-34 T 21-04-2016 IPR023376 YqcC-like domain VFU_RS13100 e870a157e93a17ab9ab1701d6896da6f 103 PANTHER PTHR39586 1 101 1.9E-33 T 21-04-2016 VFU_RS13100 e870a157e93a17ab9ab1701d6896da6f 103 SUPERFAMILY SSF158452 4 101 5.89E-35 T 21-04-2016 IPR023376 YqcC-like domain VFU_RS10750 8626573c8f4695312e0200f907610a42 573 PANTHER PTHR24222:SF30 1 573 1.5E-238 T 21-04-2016 VFU_RS10750 8626573c8f4695312e0200f907610a42 573 Pfam PF00005 ABC transporter 356 502 4.0E-32 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS10750 8626573c8f4695312e0200f907610a42 573 Gene3D G3DSA:1.20.1560.10 8 322 1.5E-25 T 21-04-2016 VFU_RS10750 8626573c8f4695312e0200f907610a42 573 SUPERFAMILY SSF52540 334 571 2.09E-72 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS10750 8626573c8f4695312e0200f907610a42 573 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS10750 8626573c8f4695312e0200f907610a42 573 SMART SM00382 365 549 3.9E-17 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS10750 8626573c8f4695312e0200f907610a42 573 PANTHER PTHR24222 1 573 1.5E-238 T 21-04-2016 VFU_RS10750 8626573c8f4695312e0200f907610a42 573 Gene3D G3DSA:3.40.50.300 339 568 3.7E-69 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS10750 8626573c8f4695312e0200f907610a42 573 SUPERFAMILY SSF90123 7 322 2.09E-37 T 21-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VFU_RS10750 8626573c8f4695312e0200f907610a42 573 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 6 533 1.7E-139 T 21-04-2016 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0006810|GO:0016021|GO:0042626 VFU_RS13625 863093d806b8d80dd1bb9091d33809b3 258 SUPERFAMILY SSF52540 35 223 3.97E-32 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS13625 863093d806b8d80dd1bb9091d33809b3 258 PANTHER PTHR34383 2 258 1.1E-184 T 21-04-2016 VFU_RS13625 863093d806b8d80dd1bb9091d33809b3 258 Gene3D G3DSA:3.40.50.300 3 241 8.7E-111 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS13625 863093d806b8d80dd1bb9091d33809b3 258 PANTHER PTHR34383:SF1 2 258 1.1E-184 T 21-04-2016 VFU_RS13625 863093d806b8d80dd1bb9091d33809b3 258 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 4 229 1.8E-114 T 21-04-2016 IPR022488 Polyphosphate kinase-2-related VFU_RS13625 863093d806b8d80dd1bb9091d33809b3 258 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 3 229 1.2E-116 T 21-04-2016 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 VFU_RS13625 863093d806b8d80dd1bb9091d33809b3 258 PIRSF PIRSF028756 1 258 5.0E-134 T 21-04-2016 IPR016898 Polyphosphate kinase 2 VFU_RS08090 2492503dedba3e40cd9ab88ac66f81c6 820 Gene3D G3DSA:3.40.228.10 186 394 1.5E-54 T 21-04-2016 VFU_RS08090 2492503dedba3e40cd9ab88ac66f81c6 820 SUPERFAMILY SSF50692 669 817 4.75E-41 T 21-04-2016 IPR009010 Aspartate decarboxylase-like domain VFU_RS08090 2492503dedba3e40cd9ab88ac66f81c6 820 Pfam PF00384 Molybdopterin oxidoreductase 87 560 3.4E-79 T 21-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 VFU_RS08090 2492503dedba3e40cd9ab88ac66f81c6 820 Gene3D G3DSA:3.90.55.10 505 608 1.3E-34 T 21-04-2016 VFU_RS08090 2492503dedba3e40cd9ab88ac66f81c6 820 TIGRFAM TIGR02164 torA: trimethylamine-N-oxide reductase TorA 1 819 0.0 T 21-04-2016 IPR011887 Trimethylamine-N-oxide reductase TorA GO:0030151|GO:0042597|GO:0050626 VFU_RS08090 2492503dedba3e40cd9ab88ac66f81c6 820 SUPERFAMILY SSF53706 44 660 1.15E-165 T 21-04-2016 VFU_RS08090 2492503dedba3e40cd9ab88ac66f81c6 820 PANTHER PTHR11615 328 432 0.0 T 21-04-2016 VFU_RS08090 2492503dedba3e40cd9ab88ac66f81c6 820 PANTHER PTHR11615 50 306 0.0 T 21-04-2016 VFU_RS08090 2492503dedba3e40cd9ab88ac66f81c6 820 PANTHER PTHR11615 448 820 0.0 T 21-04-2016 VFU_RS08090 2492503dedba3e40cd9ab88ac66f81c6 820 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 503 520 - T 21-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 VFU_RS08090 2492503dedba3e40cd9ab88ac66f81c6 820 Gene3D G3DSA:2.40.40.20 649 812 1.3E-53 T 21-04-2016 VFU_RS08090 2492503dedba3e40cd9ab88ac66f81c6 820 PANTHER PTHR11615:SF133 328 432 0.0 T 21-04-2016 VFU_RS08090 2492503dedba3e40cd9ab88ac66f81c6 820 PANTHER PTHR11615:SF133 50 306 0.0 T 21-04-2016 VFU_RS08090 2492503dedba3e40cd9ab88ac66f81c6 820 PANTHER PTHR11615:SF133 448 820 0.0 T 21-04-2016 VFU_RS08090 2492503dedba3e40cd9ab88ac66f81c6 820 Pfam PF01568 Molydopterin dinucleotide binding domain 676 796 1.3E-22 T 21-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 VFU_RS08090 2492503dedba3e40cd9ab88ac66f81c6 820 Gene3D G3DSA:3.40.50.740 81 181 2.9E-50 T 21-04-2016 VFU_RS08090 2492503dedba3e40cd9ab88ac66f81c6 820 Gene3D G3DSA:3.40.50.740 395 504 2.9E-50 T 21-04-2016 VFU_RS08090 2492503dedba3e40cd9ab88ac66f81c6 820 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 28 3.6E-4 T 21-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VFU_RS13260 89bbf40bb55bf93fffea91066f39d566 553 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 550 1.1E-172 T 21-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 VFU_RS13260 89bbf40bb55bf93fffea91066f39d566 553 PIRSF PIRSF003128 1 553 4.0E-161 T 21-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 VFU_RS13260 89bbf40bb55bf93fffea91066f39d566 553 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 507 7.0E-19 T 21-04-2016 IPR003395 RecF/RecN/SMC, N-terminal VFU_RS13260 89bbf40bb55bf93fffea91066f39d566 553 Gene3D G3DSA:3.40.50.300 1 206 2.9E-68 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS13260 89bbf40bb55bf93fffea91066f39d566 553 PANTHER PTHR11059 2 553 8.4E-179 T 21-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 VFU_RS13260 89bbf40bb55bf93fffea91066f39d566 553 SUPERFAMILY SSF52540 1 199 8.5E-69 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS13260 89bbf40bb55bf93fffea91066f39d566 553 SUPERFAMILY SSF52540 351 514 8.5E-69 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS13260 89bbf40bb55bf93fffea91066f39d566 553 SUPERFAMILY SSF52540 287 322 8.5E-69 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS13260 89bbf40bb55bf93fffea91066f39d566 553 Gene3D G3DSA:3.40.50.300 369 387 1.5E-4 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS13260 89bbf40bb55bf93fffea91066f39d566 553 Gene3D G3DSA:3.40.50.300 430 495 1.5E-4 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS02835 0817184d25cacce6be35abc2ca2cfade 205 Gene3D G3DSA:1.10.287.990 20 85 7.3E-21 T 21-04-2016 VFU_RS02835 0817184d25cacce6be35abc2ca2cfade 205 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 163 170 - T 21-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VFU_RS02835 0817184d25cacce6be35abc2ca2cfade 205 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 85 1.3E-25 T 21-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VFU_RS02835 0817184d25cacce6be35abc2ca2cfade 205 PIRSF PIRSF000349 1 204 4.3E-77 T 21-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VFU_RS02835 0817184d25cacce6be35abc2ca2cfade 205 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 4.06E-22 T 21-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VFU_RS02835 0817184d25cacce6be35abc2ca2cfade 205 PRINTS PR01703 Manganese superoxide dismutase signature 68 81 4.06E-22 T 21-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VFU_RS02835 0817184d25cacce6be35abc2ca2cfade 205 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 4.06E-22 T 21-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VFU_RS02835 0817184d25cacce6be35abc2ca2cfade 205 PRINTS PR01703 Manganese superoxide dismutase signature 161 173 4.06E-22 T 21-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VFU_RS02835 0817184d25cacce6be35abc2ca2cfade 205 PRINTS PR01703 Manganese superoxide dismutase signature 121 129 4.06E-22 T 21-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VFU_RS02835 0817184d25cacce6be35abc2ca2cfade 205 SUPERFAMILY SSF54719 88 200 3.27E-43 T 21-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VFU_RS02835 0817184d25cacce6be35abc2ca2cfade 205 SUPERFAMILY SSF46609 1 86 3.01E-28 T 21-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VFU_RS02835 0817184d25cacce6be35abc2ca2cfade 205 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 92 195 6.7E-39 T 21-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VFU_RS02835 0817184d25cacce6be35abc2ca2cfade 205 PANTHER PTHR11404 1 203 1.2E-89 T 21-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VFU_RS04910 22368d21c91b1417d96e482f4779e647 348 Pfam PF13416 Bacterial extracellular solute-binding protein 39 306 2.3E-20 T 21-04-2016 VFU_RS04910 22368d21c91b1417d96e482f4779e647 348 Gene3D G3DSA:3.40.190.10 137 292 4.1E-26 T 21-04-2016 VFU_RS04910 22368d21c91b1417d96e482f4779e647 348 Gene3D G3DSA:3.40.190.10 23 136 2.2E-10 T 21-04-2016 VFU_RS04910 22368d21c91b1417d96e482f4779e647 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 243 262 1.52E-13 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VFU_RS04910 22368d21c91b1417d96e482f4779e647 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 288 314 1.52E-13 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VFU_RS04910 22368d21c91b1417d96e482f4779e647 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 113 129 1.52E-13 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VFU_RS04910 22368d21c91b1417d96e482f4779e647 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 27 43 1.52E-13 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VFU_RS04910 22368d21c91b1417d96e482f4779e647 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 158 177 1.52E-13 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VFU_RS04910 22368d21c91b1417d96e482f4779e647 348 PANTHER PTHR30222 1 343 9.3E-92 T 21-04-2016 VFU_RS04910 22368d21c91b1417d96e482f4779e647 348 PANTHER PTHR30222:SF10 1 343 9.3E-92 T 21-04-2016 VFU_RS04910 22368d21c91b1417d96e482f4779e647 348 SUPERFAMILY SSF53850 23 341 1.93E-50 T 21-04-2016 VFU_RS10355 dcf819f931dd14141139f079174035f2 124 Hamap MF_01144 UPF0299 membrane protein YohJ [yohJ]. 1 120 20.832 T 21-04-2016 IPR022957 Uncharacterised protein family UPF0299 VFU_RS10355 dcf819f931dd14141139f079174035f2 124 Pfam PF03788 LrgA family 20 110 1.8E-25 T 21-04-2016 IPR005538 LrgA/CidA family GO:0016021 VFU_RS10355 dcf819f931dd14141139f079174035f2 124 PANTHER PTHR33931:SF2 1 121 7.8E-38 T 21-04-2016 VFU_RS10355 dcf819f931dd14141139f079174035f2 124 PANTHER PTHR33931 1 121 7.8E-38 T 21-04-2016 VFU_RS00680 024964cb632680e1ca9cf610e9307d30 410 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 320 399 5.1E-9 T 21-04-2016 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain VFU_RS00680 024964cb632680e1ca9cf610e9307d30 410 Pfam PF13440 Polysaccharide biosynthesis protein 27 318 1.9E-6 T 21-04-2016 VFU_RS13095 a73631a086e5d3de737981a05b2ab5b5 243 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 50 64 - T 21-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS13095 a73631a086e5d3de737981a05b2ab5b5 243 SUPERFAMILY SSF55120 2 236 3.84E-61 T 21-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS13095 a73631a086e5d3de737981a05b2ab5b5 243 Pfam PF00849 RNA pseudouridylate synthase 11 170 4.3E-31 T 21-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS13095 a73631a086e5d3de737981a05b2ab5b5 243 PANTHER PTHR11079:SF60 3 236 3.2E-82 T 21-04-2016 VFU_RS13095 a73631a086e5d3de737981a05b2ab5b5 243 PANTHER PTHR11079 3 236 3.2E-82 T 21-04-2016 VFU_RS14185 7b4b52036dfcffe6a53dcb328e36cfc7 269 Gene3D G3DSA:3.40.50.720 1 163 3.7E-59 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS14185 7b4b52036dfcffe6a53dcb328e36cfc7 269 PANTHER PTHR20836 1 269 1.1E-100 T 21-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VFU_RS14185 7b4b52036dfcffe6a53dcb328e36cfc7 269 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 125 5.4E-40 T 21-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VFU_RS14185 7b4b52036dfcffe6a53dcb328e36cfc7 269 SUPERFAMILY SSF55347 127 236 1.26E-37 T 21-04-2016 VFU_RS14185 7b4b52036dfcffe6a53dcb328e36cfc7 269 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 150 167 - T 21-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VFU_RS14185 7b4b52036dfcffe6a53dcb328e36cfc7 269 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 128 264 1.2E-43 T 21-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VFU_RS14185 7b4b52036dfcffe6a53dcb328e36cfc7 269 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 265 1.7E-98 T 21-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VFU_RS14185 7b4b52036dfcffe6a53dcb328e36cfc7 269 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 265 35.5 T 21-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VFU_RS14185 7b4b52036dfcffe6a53dcb328e36cfc7 269 PIRSF PIRSF000161 1 268 1.9E-89 T 21-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VFU_RS14185 7b4b52036dfcffe6a53dcb328e36cfc7 269 PANTHER PTHR20836:SF0 1 269 1.1E-100 T 21-04-2016 VFU_RS14185 7b4b52036dfcffe6a53dcb328e36cfc7 269 SUPERFAMILY SSF51735 236 268 5.11E-52 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS14185 7b4b52036dfcffe6a53dcb328e36cfc7 269 SUPERFAMILY SSF51735 1 126 5.11E-52 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS15140 57a1d4e51a2658bb14003856375faa6a 234 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site VFU_RS15140 57a1d4e51a2658bb14003856375faa6a 234 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 1.1E-5 T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site VFU_RS11230 5230d5a6f174b0dc2cf02e6a6ffd82d9 418 SUPERFAMILY SSF56796 1 380 4.45E-90 T 21-04-2016 VFU_RS11230 5230d5a6f174b0dc2cf02e6a6ffd82d9 418 Gene3D G3DSA:3.40.50.1970 1 179 3.6E-48 T 21-04-2016 VFU_RS11230 5230d5a6f174b0dc2cf02e6a6ffd82d9 418 PANTHER PTHR11496 1 386 3.8E-147 T 21-04-2016 VFU_RS11230 5230d5a6f174b0dc2cf02e6a6ffd82d9 418 Gene3D G3DSA:1.20.1090.10 185 381 3.1E-45 T 21-04-2016 VFU_RS11230 5230d5a6f174b0dc2cf02e6a6ffd82d9 418 PANTHER PTHR11496:SF68 1 386 3.8E-147 T 21-04-2016 VFU_RS11230 5230d5a6f174b0dc2cf02e6a6ffd82d9 418 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 372 2.0E-93 T 21-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 VFU_RS05265 3b5e078cfd74ea7f4abb688622e223ca 185 Pfam PF01765 Ribosome recycling factor 20 183 9.2E-62 T 21-04-2016 IPR023584 Ribosome recycling factor domain VFU_RS05265 3b5e078cfd74ea7f4abb688622e223ca 185 SUPERFAMILY SSF55194 2 185 1.26E-70 T 21-04-2016 IPR023584 Ribosome recycling factor domain VFU_RS05265 3b5e078cfd74ea7f4abb688622e223ca 185 Gene3D G3DSA:1.10.132.20 67 185 1.7E-44 T 21-04-2016 IPR023584 Ribosome recycling factor domain VFU_RS05265 3b5e078cfd74ea7f4abb688622e223ca 185 PANTHER PTHR20982 1 185 4.0E-81 T 21-04-2016 IPR002661 Ribosome recycling factor GO:0006412 VFU_RS05265 3b5e078cfd74ea7f4abb688622e223ca 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.384 T 21-04-2016 IPR002661 Ribosome recycling factor GO:0006412 VFU_RS05265 3b5e078cfd74ea7f4abb688622e223ca 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 9.5E-76 T 21-04-2016 IPR002661 Ribosome recycling factor GO:0006412 VFU_RS10740 a8bbc094e3743a5b2ee2c97b6e95a549 319 PANTHER PTHR22912 1 314 5.7E-164 T 21-04-2016 VFU_RS10740 a8bbc094e3743a5b2ee2c97b6e95a549 319 PANTHER PTHR22912:SF48 1 314 5.7E-164 T 21-04-2016 VFU_RS10740 a8bbc094e3743a5b2ee2c97b6e95a549 319 Gene3D G3DSA:3.50.50.60 5 119 6.3E-34 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS10740 a8bbc094e3743a5b2ee2c97b6e95a549 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 2.4E-38 T 21-04-2016 VFU_RS10740 a8bbc094e3743a5b2ee2c97b6e95a549 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 2.4E-38 T 21-04-2016 VFU_RS10740 a8bbc094e3743a5b2ee2c97b6e95a549 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 2.4E-38 T 21-04-2016 VFU_RS10740 a8bbc094e3743a5b2ee2c97b6e95a549 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 2.4E-38 T 21-04-2016 VFU_RS10740 a8bbc094e3743a5b2ee2c97b6e95a549 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.4E-38 T 21-04-2016 VFU_RS10740 a8bbc094e3743a5b2ee2c97b6e95a549 319 SUPERFAMILY SSF51905 2 313 3.43E-54 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS10740 a8bbc094e3743a5b2ee2c97b6e95a549 319 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 6.9E-48 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS10740 a8bbc094e3743a5b2ee2c97b6e95a549 319 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 21-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 VFU_RS10740 a8bbc094e3743a5b2ee2c97b6e95a549 319 Gene3D G3DSA:3.50.50.60 234 313 3.7E-9 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS10740 a8bbc094e3743a5b2ee2c97b6e95a549 319 Gene3D G3DSA:3.50.50.60 120 233 1.6E-34 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS10740 a8bbc094e3743a5b2ee2c97b6e95a549 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 5.5E-76 T 21-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VFU_RS10740 a8bbc094e3743a5b2ee2c97b6e95a549 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 5.5E-76 T 21-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VFU_RS10740 a8bbc094e3743a5b2ee2c97b6e95a549 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 5.5E-76 T 21-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VFU_RS10740 a8bbc094e3743a5b2ee2c97b6e95a549 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 5.5E-76 T 21-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VFU_RS10740 a8bbc094e3743a5b2ee2c97b6e95a549 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 5.5E-76 T 21-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VFU_RS10740 a8bbc094e3743a5b2ee2c97b6e95a549 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 5.5E-76 T 21-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VFU_RS10740 a8bbc094e3743a5b2ee2c97b6e95a549 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 5.5E-76 T 21-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VFU_RS10740 a8bbc094e3743a5b2ee2c97b6e95a549 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 5.5E-76 T 21-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VFU_RS10740 a8bbc094e3743a5b2ee2c97b6e95a549 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 5.5E-76 T 21-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VFU_RS10740 a8bbc094e3743a5b2ee2c97b6e95a549 319 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 3.1E-124 T 21-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 VFU_RS09705 048061410afa86f0cffde17944bd269c 505 Gene3D G3DSA:3.30.70.270 350 504 2.9E-43 T 21-04-2016 VFU_RS09705 048061410afa86f0cffde17944bd269c 505 SMART SM01079 71 266 3.1E-23 T 21-04-2016 IPR006189 CHASE domain VFU_RS09705 048061410afa86f0cffde17944bd269c 505 SUPERFAMILY SSF55073 354 503 3.14E-39 T 21-04-2016 IPR029787 Nucleotide cyclase VFU_RS09705 048061410afa86f0cffde17944bd269c 505 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 347 504 6.0E-38 T 21-04-2016 IPR000160 GGDEF domain VFU_RS09705 048061410afa86f0cffde17944bd269c 505 PANTHER PTHR10799 199 504 1.7E-14 T 21-04-2016 VFU_RS09705 048061410afa86f0cffde17944bd269c 505 PANTHER PTHR10799 16 31 1.7E-14 T 21-04-2016 VFU_RS09705 048061410afa86f0cffde17944bd269c 505 SMART SM00267 338 504 3.1E-43 T 21-04-2016 IPR000160 GGDEF domain VFU_RS09705 048061410afa86f0cffde17944bd269c 505 Pfam PF00990 Diguanylate cyclase, GGDEF domain 350 500 1.7E-33 T 21-04-2016 IPR000160 GGDEF domain VFU_RS09705 048061410afa86f0cffde17944bd269c 505 PANTHER PTHR10799:SF774 199 504 1.7E-14 T 21-04-2016 VFU_RS09705 048061410afa86f0cffde17944bd269c 505 PANTHER PTHR10799:SF774 16 31 1.7E-14 T 21-04-2016 VFU_RS09705 048061410afa86f0cffde17944bd269c 505 Pfam PF03924 CHASE domain 75 264 4.5E-25 T 21-04-2016 IPR006189 CHASE domain VFU_RS04325 001b69fefeea147cd5670c0613544191 630 SUPERFAMILY SSF51230 203 294 3.01E-22 T 21-04-2016 IPR011053 Single hybrid motif VFU_RS04325 001b69fefeea147cd5670c0613544191 630 Pfam PF00364 Biotin-requiring enzyme 103 173 2.6E-21 T 21-04-2016 IPR000089 Biotin/lipoyl attachment VFU_RS04325 001b69fefeea147cd5670c0613544191 630 Pfam PF00364 Biotin-requiring enzyme 4 73 1.6E-19 T 21-04-2016 IPR000089 Biotin/lipoyl attachment VFU_RS04325 001b69fefeea147cd5670c0613544191 630 Pfam PF00364 Biotin-requiring enzyme 203 273 6.7E-20 T 21-04-2016 IPR000089 Biotin/lipoyl attachment VFU_RS04325 001b69fefeea147cd5670c0613544191 630 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 21-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site VFU_RS04325 001b69fefeea147cd5670c0613544191 630 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 225 254 - T 21-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site VFU_RS04325 001b69fefeea147cd5670c0613544191 630 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 125 154 - T 21-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site VFU_RS04325 001b69fefeea147cd5670c0613544191 630 Gene3D G3DSA:2.40.50.100 204 278 1.7E-20 T 21-04-2016 VFU_RS04325 001b69fefeea147cd5670c0613544191 630 Gene3D G3DSA:2.40.50.100 104 178 2.3E-21 T 21-04-2016 VFU_RS04325 001b69fefeea147cd5670c0613544191 630 Gene3D G3DSA:4.10.320.10 317 363 3.7E-21 T 21-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 VFU_RS04325 001b69fefeea147cd5670c0613544191 630 SUPERFAMILY SSF52777 388 629 5.78E-81 T 21-04-2016 VFU_RS04325 001b69fefeea147cd5670c0613544191 630 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 182 630 2.2E-206 T 21-04-2016 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 VFU_RS04325 001b69fefeea147cd5670c0613544191 630 Pfam PF02817 e3 binding domain 323 357 3.2E-14 T 21-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 VFU_RS04325 001b69fefeea147cd5670c0613544191 630 SUPERFAMILY SSF51230 1 91 2.36E-22 T 21-04-2016 IPR011053 Single hybrid motif VFU_RS04325 001b69fefeea147cd5670c0613544191 630 SUPERFAMILY SSF51230 102 194 5.89E-23 T 21-04-2016 IPR011053 Single hybrid motif VFU_RS04325 001b69fefeea147cd5670c0613544191 630 Gene3D G3DSA:2.40.50.100 1 91 7.0E-21 T 21-04-2016 VFU_RS04325 001b69fefeea147cd5670c0613544191 630 PANTHER PTHR23151:SF68 382 630 1.4E-259 T 21-04-2016 VFU_RS04325 001b69fefeea147cd5670c0613544191 630 PANTHER PTHR23151:SF68 21 218 1.4E-259 T 21-04-2016 VFU_RS04325 001b69fefeea147cd5670c0613544191 630 PANTHER PTHR23151:SF68 319 363 1.4E-259 T 21-04-2016 VFU_RS04325 001b69fefeea147cd5670c0613544191 630 Gene3D G3DSA:3.30.559.10 389 629 8.3E-82 T 21-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain VFU_RS04325 001b69fefeea147cd5670c0613544191 630 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 399 629 2.2E-79 T 21-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 VFU_RS04325 001b69fefeea147cd5670c0613544191 630 PANTHER PTHR23151 382 630 1.4E-259 T 21-04-2016 VFU_RS04325 001b69fefeea147cd5670c0613544191 630 PANTHER PTHR23151 21 218 1.4E-259 T 21-04-2016 VFU_RS04325 001b69fefeea147cd5670c0613544191 630 PANTHER PTHR23151 319 363 1.4E-259 T 21-04-2016 VFU_RS04325 001b69fefeea147cd5670c0613544191 630 SUPERFAMILY SSF47005 316 361 5.36E-13 T 21-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 VFU_RS13650 ce460f5cfd4552ebea3333fbaac776c7 704 PANTHER PTHR30218 1 702 0.0 T 21-04-2016 VFU_RS13650 ce460f5cfd4552ebea3333fbaac776c7 704 Pfam PF02503 Polyphosphate kinase middle domain 119 320 1.3E-46 T 21-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 VFU_RS13650 ce460f5cfd4552ebea3333fbaac776c7 704 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 681 32.268 T 21-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 VFU_RS13650 ce460f5cfd4552ebea3333fbaac776c7 704 PIRSF PIRSF015589 1 697 3.8E-251 T 21-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 VFU_RS13650 ce460f5cfd4552ebea3333fbaac776c7 704 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 5.3E-30 T 21-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 VFU_RS13650 ce460f5cfd4552ebea3333fbaac776c7 704 SUPERFAMILY SSF143724 107 312 5.3E-64 T 21-04-2016 VFU_RS13650 ce460f5cfd4552ebea3333fbaac776c7 704 Gene3D G3DSA:3.30.870.10 315 499 1.1E-71 T 21-04-2016 VFU_RS13650 ce460f5cfd4552ebea3333fbaac776c7 704 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 677 6.8E-264 T 21-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 VFU_RS13650 ce460f5cfd4552ebea3333fbaac776c7 704 Gene3D G3DSA:3.30.870.10 500 684 5.1E-71 T 21-04-2016 VFU_RS13650 ce460f5cfd4552ebea3333fbaac776c7 704 SUPERFAMILY SSF140356 4 104 9.55E-32 T 21-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 VFU_RS13650 ce460f5cfd4552ebea3333fbaac776c7 704 PANTHER PTHR30218:SF0 1 702 0.0 T 21-04-2016 VFU_RS13650 ce460f5cfd4552ebea3333fbaac776c7 704 Pfam PF13090 Polyphosphate kinase C-terminal domain 331 676 8.5E-146 T 21-04-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 VFU_RS13650 ce460f5cfd4552ebea3333fbaac776c7 704 Gene3D G3DSA:3.30.1840.10 107 300 1.3E-55 T 21-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 VFU_RS13650 ce460f5cfd4552ebea3333fbaac776c7 704 SUPERFAMILY SSF56024 500 684 5.02E-69 T 21-04-2016 VFU_RS13650 ce460f5cfd4552ebea3333fbaac776c7 704 SUPERFAMILY SSF56024 315 492 3.77E-53 T 21-04-2016 VFU_RS02980 18e3a2b715a88c148b65d2c9733bc442 482 Gene3D G3DSA:3.40.50.300 21 228 1.3E-26 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS02980 18e3a2b715a88c148b65d2c9733bc442 482 Gene3D G3DSA:3.40.50.300 246 464 4.2E-32 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS02980 18e3a2b715a88c148b65d2c9733bc442 482 PANTHER PTHR24220:SF557 2 376 8.4E-91 T 21-04-2016 VFU_RS02980 18e3a2b715a88c148b65d2c9733bc442 482 SMART SM00382 24 211 4.6 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS02980 18e3a2b715a88c148b65d2c9733bc442 482 SMART SM00382 277 473 4.4E-6 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS02980 18e3a2b715a88c148b65d2c9733bc442 482 PANTHER PTHR24220 2 376 8.4E-91 T 21-04-2016 VFU_RS02980 18e3a2b715a88c148b65d2c9733bc442 482 SUPERFAMILY SSF52540 244 464 7.48E-35 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS02980 18e3a2b715a88c148b65d2c9733bc442 482 Pfam PF00005 ABC transporter 22 157 8.2E-12 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS02980 18e3a2b715a88c148b65d2c9733bc442 482 Pfam PF00005 ABC transporter 269 420 3.3E-20 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS02980 18e3a2b715a88c148b65d2c9733bc442 482 SUPERFAMILY SSF52540 39 226 2.84E-26 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS14340 b8f32db5904a60e47489726c126c9ec2 367 Pfam PF03969 AFG1-like ATPase 1 364 1.9E-158 T 21-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 VFU_RS14340 b8f32db5904a60e47489726c126c9ec2 367 PANTHER PTHR12169 1 366 7.5E-189 T 21-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 VFU_RS14340 b8f32db5904a60e47489726c126c9ec2 367 Gene3D G3DSA:3.40.50.300 4 177 1.6E-23 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS14340 b8f32db5904a60e47489726c126c9ec2 367 Hamap MF_01919 Cell division protein ZapE [zapE]. 1 367 53.88 T 21-04-2016 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 VFU_RS14340 b8f32db5904a60e47489726c126c9ec2 367 SUPERFAMILY SSF52540 62 199 1.05E-13 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS14340 b8f32db5904a60e47489726c126c9ec2 367 PANTHER PTHR12169:SF11 1 366 7.5E-189 T 21-04-2016 VFU_RS00160 fd0714168d6273e6093e90e0df258c5c 285 PANTHER PTHR10067 4 273 2.4E-115 T 21-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 VFU_RS00160 fd0714168d6273e6093e90e0df258c5c 285 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 48 283 2.0E-84 T 21-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 VFU_RS00160 fd0714168d6273e6093e90e0df258c5c 285 Pfam PF02666 Phosphatidylserine decarboxylase 62 270 5.5E-59 T 21-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 VFU_RS00160 fd0714168d6273e6093e90e0df258c5c 285 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 9 285 47.916 T 21-04-2016 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 VFU_RS01235 99f3a733ed0915fdb4a670ae838c329d 1042 SUPERFAMILY SSF82693 38 133 7.85E-26 T 21-04-2016 VFU_RS01235 99f3a733ed0915fdb4a670ae838c329d 1042 SUPERFAMILY SSF82866 807 1030 1.31E-42 T 21-04-2016 VFU_RS01235 99f3a733ed0915fdb4a670ae838c329d 1042 SUPERFAMILY SSF82693 135 182 8.55E-28 T 21-04-2016 VFU_RS01235 99f3a733ed0915fdb4a670ae838c329d 1042 SUPERFAMILY SSF82693 274 330 8.55E-28 T 21-04-2016 VFU_RS01235 99f3a733ed0915fdb4a670ae838c329d 1042 Gene3D G3DSA:3.30.2090.10 181 275 1.0E-26 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VFU_RS01235 99f3a733ed0915fdb4a670ae838c329d 1042 Gene3D G3DSA:3.30.70.1430 38 140 3.4E-34 T 21-04-2016 VFU_RS01235 99f3a733ed0915fdb4a670ae838c329d 1042 Pfam PF00873 AcrB/AcrD/AcrF family 1 1027 0.0 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS01235 99f3a733ed0915fdb4a670ae838c329d 1042 SUPERFAMILY SSF82693 567 673 1.15E-32 T 21-04-2016 VFU_RS01235 99f3a733ed0915fdb4a670ae838c329d 1042 Gene3D G3DSA:3.30.70.1430 569 673 2.4E-37 T 21-04-2016 VFU_RS01235 99f3a733ed0915fdb4a670ae838c329d 1042 PANTHER PTHR32063:SF13 1 1041 0.0 T 21-04-2016 VFU_RS01235 99f3a733ed0915fdb4a670ae838c329d 1042 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 1.3E-111 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS01235 99f3a733ed0915fdb4a670ae838c329d 1042 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 1.3E-111 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS01235 99f3a733ed0915fdb4a670ae838c329d 1042 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.3E-111 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS01235 99f3a733ed0915fdb4a670ae838c329d 1042 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.3E-111 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS01235 99f3a733ed0915fdb4a670ae838c329d 1042 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 1.3E-111 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS01235 99f3a733ed0915fdb4a670ae838c329d 1042 PRINTS PR00702 Acriflavin resistance protein family signature 554 571 1.3E-111 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS01235 99f3a733ed0915fdb4a670ae838c329d 1042 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 1.3E-111 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS01235 99f3a733ed0915fdb4a670ae838c329d 1042 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 1.3E-111 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS01235 99f3a733ed0915fdb4a670ae838c329d 1042 PRINTS PR00702 Acriflavin resistance protein family signature 623 637 1.3E-111 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS01235 99f3a733ed0915fdb4a670ae838c329d 1042 SUPERFAMILY SSF82866 296 497 5.49E-50 T 21-04-2016 VFU_RS01235 99f3a733ed0915fdb4a670ae838c329d 1042 Gene3D G3DSA:3.30.2090.10 723 811 2.9E-28 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VFU_RS01235 99f3a733ed0915fdb4a670ae838c329d 1042 SUPERFAMILY SSF82714 724 811 5.62E-24 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VFU_RS01235 99f3a733ed0915fdb4a670ae838c329d 1042 PANTHER PTHR32063 1 1041 0.0 T 21-04-2016 VFU_RS01235 99f3a733ed0915fdb4a670ae838c329d 1042 SUPERFAMILY SSF82714 183 272 2.75E-21 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VFU_RS01235 99f3a733ed0915fdb4a670ae838c329d 1042 Gene3D G3DSA:1.10.3850.10 281 498 1.1E-59 T 21-04-2016 VFU_RS01235 99f3a733ed0915fdb4a670ae838c329d 1042 Gene3D G3DSA:1.10.3850.10 816 1029 9.8E-57 T 21-04-2016 VFU_RS01235 99f3a733ed0915fdb4a670ae838c329d 1042 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1037 0.0 T 21-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 VFU_RS06645 41bb9c4fd7544b76ca29049791e19dac 442 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 24 437 9.4E-132 T 21-04-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 VFU_RS06645 41bb9c4fd7544b76ca29049791e19dac 442 Gene3D G3DSA:1.10.3550.10 355 433 1.1E-5 T 21-04-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain VFU_RS06645 41bb9c4fd7544b76ca29049791e19dac 442 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 1 436 34.276 T 21-04-2016 IPR023023 Deoxyguanosinetriphosphate triphosphohydrolase, type 2 VFU_RS06645 41bb9c4fd7544b76ca29049791e19dac 442 PANTHER PTHR11373 9 191 3.7E-50 T 21-04-2016 VFU_RS06645 41bb9c4fd7544b76ca29049791e19dac 442 Gene3D G3DSA:1.10.3210.10 5 250 2.5E-68 T 21-04-2016 IPR006674 HD domain VFU_RS06645 41bb9c4fd7544b76ca29049791e19dac 442 SUPERFAMILY SSF109604 232 439 3.14E-81 T 21-04-2016 VFU_RS06645 41bb9c4fd7544b76ca29049791e19dac 442 SUPERFAMILY SSF109604 23 167 3.14E-81 T 21-04-2016 VFU_RS06645 41bb9c4fd7544b76ca29049791e19dac 442 Pfam PF13286 Phosphohydrolase-associated domain 343 434 8.2E-29 T 21-04-2016 IPR026875 Phosphohydrolase-associated domain VFU_RS06645 41bb9c4fd7544b76ca29049791e19dac 442 SMART SM00471 58 264 3.3E-7 T 21-04-2016 IPR003607 HD/PDEase domain VFU_RS06645 41bb9c4fd7544b76ca29049791e19dac 442 Pfam PF01966 HD domain 62 143 1.9E-6 T 21-04-2016 IPR006674 HD domain VFU_RS06645 41bb9c4fd7544b76ca29049791e19dac 442 Gene3D G3DSA:1.10.3410.10 251 354 3.5E-24 T 21-04-2016 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain VFU_RS07065 5702c557fbae3d43f1dc5aaee7deaa45 300 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 275 288 1.5E-10 T 21-04-2016 IPR008091 Ferrichrome-binding periplasmic protein VFU_RS07065 5702c557fbae3d43f1dc5aaee7deaa45 300 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 56 74 1.5E-10 T 21-04-2016 IPR008091 Ferrichrome-binding periplasmic protein VFU_RS07065 5702c557fbae3d43f1dc5aaee7deaa45 300 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 87 102 1.5E-10 T 21-04-2016 IPR008091 Ferrichrome-binding periplasmic protein VFU_RS07065 5702c557fbae3d43f1dc5aaee7deaa45 300 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 212 230 1.5E-10 T 21-04-2016 IPR008091 Ferrichrome-binding periplasmic protein VFU_RS07065 5702c557fbae3d43f1dc5aaee7deaa45 300 Pfam PF01497 Periplasmic binding protein 39 273 1.0E-21 T 21-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 VFU_RS07065 5702c557fbae3d43f1dc5aaee7deaa45 300 SUPERFAMILY SSF53807 37 294 8.83E-44 T 21-04-2016 VFU_RS07065 5702c557fbae3d43f1dc5aaee7deaa45 300 Gene3D G3DSA:3.40.50.1980 35 106 5.5E-27 T 21-04-2016 VFU_RS07065 5702c557fbae3d43f1dc5aaee7deaa45 300 PANTHER PTHR30532 37 295 1.1E-32 T 21-04-2016 VFU_RS07065 5702c557fbae3d43f1dc5aaee7deaa45 300 Gene3D G3DSA:3.40.50.1980 127 295 5.5E-38 T 21-04-2016 VFU_RS06890 6916f74303c045889ad90c918c0d8021 330 PANTHER PTHR30329 1 290 2.2E-66 T 21-04-2016 VFU_RS06890 6916f74303c045889ad90c918c0d8021 330 PANTHER PTHR30329:SF6 1 290 2.2E-66 T 21-04-2016 VFU_RS06890 6916f74303c045889ad90c918c0d8021 330 SUPERFAMILY SSF103088 154 274 2.88E-18 T 21-04-2016 IPR006665 OmpA-like domain VFU_RS06890 6916f74303c045889ad90c918c0d8021 330 Pfam PF00691 OmpA family 170 265 1.4E-11 T 21-04-2016 IPR006665 OmpA-like domain VFU_RS06890 6916f74303c045889ad90c918c0d8021 330 Gene3D G3DSA:3.30.1330.60 146 274 2.3E-17 T 21-04-2016 IPR006665 OmpA-like domain VFU_RS06890 6916f74303c045889ad90c918c0d8021 330 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 13 63 8.9E-16 T 21-04-2016 IPR025713 Motility protein B, N-terminal domain VFU_RS09140 d9a64defcd1211df6cf76768a4d6a242 232 PANTHER PTHR30183:SF4 1 232 1.0E-110 T 21-04-2016 VFU_RS09140 d9a64defcd1211df6cf76768a4d6a242 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 218 3.6E-9 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS09140 d9a64defcd1211df6cf76768a4d6a242 232 SUPERFAMILY SSF161098 7 221 1.02E-30 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS09140 d9a64defcd1211df6cf76768a4d6a242 232 PANTHER PTHR30183 1 232 1.0E-110 T 21-04-2016 VFU_RS09140 d9a64defcd1211df6cf76768a4d6a242 232 Gene3D G3DSA:1.10.3720.10 14 227 5.4E-24 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS11540 ae6dd1980db1cb280da5ab9d5b12aa26 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 239 7.4E-109 T 21-04-2016 IPR012838 Pyruvate formate-lyase activating enzyme GO:0043365|GO:0055114 VFU_RS11540 ae6dd1980db1cb280da5ab9d5b12aa26 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 21-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 VFU_RS11540 ae6dd1980db1cb280da5ab9d5b12aa26 246 SUPERFAMILY SSF102114 23 220 5.69E-28 T 21-04-2016 VFU_RS11540 ae6dd1980db1cb280da5ab9d5b12aa26 246 Pfam PF13353 4Fe-4S single cluster domain 16 137 6.3E-20 T 21-04-2016 VFU_RS11540 ae6dd1980db1cb280da5ab9d5b12aa26 246 Pfam PF04055 Radical SAM superfamily 24 180 1.0E-30 T 21-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VFU_RS11540 ae6dd1980db1cb280da5ab9d5b12aa26 246 PANTHER PTHR30352 1 246 7.1E-144 T 21-04-2016 VFU_RS11540 ae6dd1980db1cb280da5ab9d5b12aa26 246 Gene3D G3DSA:3.80.30.10 69 245 2.9E-71 T 21-04-2016 VFU_RS11540 ae6dd1980db1cb280da5ab9d5b12aa26 246 PANTHER PTHR30352:SF9 1 246 7.1E-144 T 21-04-2016 VFU_RS13845 9df032eb522145a9ccc0b3f337585ff9 385 SUPERFAMILY SSF55781 24 142 6.38E-14 T 21-04-2016 IPR029016 GAF domain-like VFU_RS13845 9df032eb522145a9ccc0b3f337585ff9 385 Gene3D G3DSA:1.10.3210.10 188 347 3.0E-12 T 21-04-2016 IPR006674 HD domain VFU_RS13845 9df032eb522145a9ccc0b3f337585ff9 385 Pfam PF13487 HD domain 244 313 1.3E-14 T 21-04-2016 VFU_RS13845 9df032eb522145a9ccc0b3f337585ff9 385 SUPERFAMILY SSF109604 189 358 2.54E-22 T 21-04-2016 VFU_RS13845 9df032eb522145a9ccc0b3f337585ff9 385 Gene3D G3DSA:3.30.450.40 30 142 8.3E-10 T 21-04-2016 IPR029016 GAF domain-like VFU_RS12875 e273bef3ff5226479e43feaf9cc8140a 262 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 81 179 1.1E-46 T 21-04-2016 IPR012997 Rare lipoprotein A VFU_RS12875 e273bef3ff5226479e43feaf9cc8140a 262 Pfam PF03330 Lytic transglycolase 79 168 3.8E-28 T 21-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain VFU_RS12875 e273bef3ff5226479e43feaf9cc8140a 262 PANTHER PTHR34183:SF1 13 239 2.1E-96 T 21-04-2016 VFU_RS12875 e273bef3ff5226479e43feaf9cc8140a 262 PANTHER PTHR34183 13 239 2.1E-96 T 21-04-2016 VFU_RS12875 e273bef3ff5226479e43feaf9cc8140a 262 SUPERFAMILY SSF50685 83 167 1.71E-10 T 21-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain VFU_RS12875 e273bef3ff5226479e43feaf9cc8140a 262 Gene3D G3DSA:2.40.40.10 118 169 5.4E-5 T 21-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain VFU_RS12875 e273bef3ff5226479e43feaf9cc8140a 262 SUPERFAMILY SSF110997 186 258 1.02E-12 T 21-04-2016 IPR007730 Sporulation-related domain GO:0042834 VFU_RS12875 e273bef3ff5226479e43feaf9cc8140a 262 Pfam PF05036 Sporulation related domain 187 255 1.9E-6 T 21-04-2016 IPR007730 Sporulation-related domain GO:0042834 VFU_RS12875 e273bef3ff5226479e43feaf9cc8140a 262 Gene3D G3DSA:3.30.70.1070 181 256 6.7E-10 T 21-04-2016 IPR007730 Sporulation-related domain GO:0042834 VFU_RS19555 fedcdaa2ab9b8a969274b2f5e15ca20b 119 Gene3D G3DSA:4.10.320.10 3 49 2.5E-22 T 21-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 VFU_RS19555 fedcdaa2ab9b8a969274b2f5e15ca20b 119 PANTHER PTHR23151:SF68 1 48 1.3E-48 T 21-04-2016 VFU_RS19555 fedcdaa2ab9b8a969274b2f5e15ca20b 119 PANTHER PTHR23151 1 48 1.3E-48 T 21-04-2016 VFU_RS19555 fedcdaa2ab9b8a969274b2f5e15ca20b 119 PANTHER PTHR23151 67 119 1.3E-48 T 21-04-2016 VFU_RS19555 fedcdaa2ab9b8a969274b2f5e15ca20b 119 Pfam PF02817 e3 binding domain 8 42 2.7E-15 T 21-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 VFU_RS19555 fedcdaa2ab9b8a969274b2f5e15ca20b 119 SUPERFAMILY SSF52777 73 119 3.72E-5 T 21-04-2016 VFU_RS19555 fedcdaa2ab9b8a969274b2f5e15ca20b 119 SUPERFAMILY SSF47005 2 46 6.02E-14 T 21-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 VFU_RS19555 fedcdaa2ab9b8a969274b2f5e15ca20b 119 PANTHER PTHR23151:SF68 67 119 1.3E-48 T 21-04-2016 VFU_RS00485 fd5d3bc8100a8616b192cb5f472e4640 90 Gene3D G3DSA:4.10.520.10 1 90 1.3E-37 T 21-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 VFU_RS00485 fd5d3bc8100a8616b192cb5f472e4640 90 SMART SM00411 1 90 6.0E-45 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VFU_RS00485 fd5d3bc8100a8616b192cb5f472e4640 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 21-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VFU_RS00485 fd5d3bc8100a8616b192cb5f472e4640 90 SUPERFAMILY SSF47729 1 90 5.3E-33 T 21-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 VFU_RS00485 fd5d3bc8100a8616b192cb5f472e4640 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 6.5E-20 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VFU_RS00485 fd5d3bc8100a8616b192cb5f472e4640 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 6.5E-20 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VFU_RS00485 fd5d3bc8100a8616b192cb5f472e4640 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 6.5E-20 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VFU_RS00485 fd5d3bc8100a8616b192cb5f472e4640 90 PANTHER PTHR33175 1 90 3.4E-56 T 21-04-2016 VFU_RS00485 fd5d3bc8100a8616b192cb5f472e4640 90 PANTHER PTHR33175:SF4 1 90 3.4E-56 T 21-04-2016 VFU_RS00485 fd5d3bc8100a8616b192cb5f472e4640 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.1E-33 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VFU_RS09220 59352b7ab4c75db45448f4363b9ec380 406 PANTHER PTHR11730 1 406 9.4E-120 T 21-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 VFU_RS09220 59352b7ab4c75db45448f4363b9ec380 406 PANTHER PTHR11730:SF6 1 406 9.4E-120 T 21-04-2016 VFU_RS09220 59352b7ab4c75db45448f4363b9ec380 406 Gene3D G3DSA:1.10.3430.10 15 384 7.9E-95 T 21-04-2016 IPR029020 Ammonium/urea transporter VFU_RS09220 59352b7ab4c75db45448f4363b9ec380 406 SUPERFAMILY SSF111352 17 384 2.22E-96 T 21-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 VFU_RS09220 59352b7ab4c75db45448f4363b9ec380 406 Pfam PF00909 Ammonium Transporter Family 23 399 5.2E-88 T 21-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 VFU_RS09220 59352b7ab4c75db45448f4363b9ec380 406 ProSitePatterns PS01219 Ammonium transporters signature. 167 192 - T 21-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 VFU_RS14155 e568083da759a7bc5e4209ad845266d7 281 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.2E-13 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS14155 e568083da759a7bc5e4209ad845266d7 281 PANTHER PTHR30126:SF11 1 281 5.5E-56 T 21-04-2016 VFU_RS14155 e568083da759a7bc5e4209ad845266d7 281 SUPERFAMILY SSF46785 4 85 1.69E-12 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS14155 e568083da759a7bc5e4209ad845266d7 281 Gene3D G3DSA:3.40.190.10 91 171 1.1E-8 T 21-04-2016 VFU_RS14155 e568083da759a7bc5e4209ad845266d7 281 Pfam PF03466 LysR substrate binding domain 90 275 2.4E-20 T 21-04-2016 IPR005119 LysR, substrate-binding VFU_RS14155 e568083da759a7bc5e4209ad845266d7 281 SUPERFAMILY SSF53850 90 278 2.35E-23 T 21-04-2016 VFU_RS14155 e568083da759a7bc5e4209ad845266d7 281 PANTHER PTHR30126 1 281 5.5E-56 T 21-04-2016 VFU_RS14155 e568083da759a7bc5e4209ad845266d7 281 Gene3D G3DSA:1.10.10.10 3 79 7.7E-17 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS07335 cfd1092ac2c016c4eeb7e186d344481c 478 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 10 24 - T 21-04-2016 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site VFU_RS07335 cfd1092ac2c016c4eeb7e186d344481c 478 PANTHER PTHR10353 6 478 4.0E-234 T 21-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VFU_RS07335 cfd1092ac2c016c4eeb7e186d344481c 478 Pfam PF00232 Glycosyl hydrolase family 1 3 475 4.0E-132 T 21-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VFU_RS07335 cfd1092ac2c016c4eeb7e186d344481c 478 SUPERFAMILY SSF51445 5 475 1.61E-160 T 21-04-2016 IPR017853 Glycoside hydrolase superfamily VFU_RS07335 cfd1092ac2c016c4eeb7e186d344481c 478 PANTHER PTHR10353:SF35 6 478 4.0E-234 T 21-04-2016 VFU_RS07335 cfd1092ac2c016c4eeb7e186d344481c 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 440 452 2.3E-15 T 21-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VFU_RS07335 cfd1092ac2c016c4eeb7e186d344481c 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 372 380 2.3E-15 T 21-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VFU_RS07335 cfd1092ac2c016c4eeb7e186d344481c 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 306 320 2.3E-15 T 21-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VFU_RS07335 cfd1092ac2c016c4eeb7e186d344481c 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 415 432 2.3E-15 T 21-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VFU_RS07335 cfd1092ac2c016c4eeb7e186d344481c 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 393 404 2.3E-15 T 21-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VFU_RS07335 cfd1092ac2c016c4eeb7e186d344481c 478 Gene3D G3DSA:3.20.20.80 5 476 2.1E-149 T 21-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VFU_RS07335 cfd1092ac2c016c4eeb7e186d344481c 478 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 372 380 - T 21-04-2016 IPR018120 Glycoside hydrolase family 1, active site VFU_RS05340 4506fba912b53e09663a9c96662ccada 103 SUPERFAMILY SSF46626 14 102 2.07E-23 T 21-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VFU_RS05340 4506fba912b53e09663a9c96662ccada 103 Gene3D G3DSA:1.10.760.10 12 103 4.6E-28 T 21-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VFU_RS05340 4506fba912b53e09663a9c96662ccada 103 Pfam PF00034 Cytochrome c 25 103 1.1E-10 T 21-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VFU_RS05340 4506fba912b53e09663a9c96662ccada 103 PANTHER PTHR33751 21 103 7.7E-28 T 21-04-2016 VFU_RS05340 4506fba912b53e09663a9c96662ccada 103 PRINTS PR00605 Class IC cytochrome C signature 77 99 8.44E-5 T 21-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VFU_RS05340 4506fba912b53e09663a9c96662ccada 103 PRINTS PR00605 Class IC cytochrome C signature 32 43 8.44E-5 T 21-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VFU_RS05340 4506fba912b53e09663a9c96662ccada 103 PANTHER PTHR33751:SF3 21 103 7.7E-28 T 21-04-2016 VFU_RS02250 a68fa43788b8a92734bda2ae5b95d6d1 239 Gene3D G3DSA:3.40.50.1000 9 235 9.1E-32 T 21-04-2016 IPR023214 HAD-like domain VFU_RS02250 a68fa43788b8a92734bda2ae5b95d6d1 239 SUPERFAMILY SSF56784 9 238 6.24E-39 T 21-04-2016 IPR023214 HAD-like domain VFU_RS02250 a68fa43788b8a92734bda2ae5b95d6d1 239 Pfam PF13419 Haloacid dehalogenase-like hydrolase 139 206 1.3E-9 T 21-04-2016 IPR023214 HAD-like domain VFU_RS02250 a68fa43788b8a92734bda2ae5b95d6d1 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 196 209 5.5E-5 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 VFU_RS02250 a68fa43788b8a92734bda2ae5b95d6d1 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 10 21 5.5E-5 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 VFU_RS02250 a68fa43788b8a92734bda2ae5b95d6d1 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 150 166 5.5E-5 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 VFU_RS02250 a68fa43788b8a92734bda2ae5b95d6d1 239 PANTHER PTHR12725 1 238 3.3E-61 T 21-04-2016 VFU_RS02250 a68fa43788b8a92734bda2ae5b95d6d1 239 PANTHER PTHR12725:SF65 1 238 3.3E-61 T 21-04-2016 VFU_RS02250 a68fa43788b8a92734bda2ae5b95d6d1 239 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 114 201 3.9E-10 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 VFU_RS04905 028708eaf0d0e23a22b2076e46c0d10e 782 Pfam PF00672 HAMP domain 262 328 6.7E-7 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS04905 028708eaf0d0e23a22b2076e46c0d10e 782 Pfam PF00563 EAL domain 531 755 7.6E-65 T 21-04-2016 IPR001633 EAL domain VFU_RS04905 028708eaf0d0e23a22b2076e46c0d10e 782 SUPERFAMILY SSF55073 344 509 1.26E-38 T 21-04-2016 IPR029787 Nucleotide cyclase VFU_RS04905 028708eaf0d0e23a22b2076e46c0d10e 782 Gene3D G3DSA:3.20.20.450 521 766 2.5E-72 T 21-04-2016 IPR001633 EAL domain VFU_RS04905 028708eaf0d0e23a22b2076e46c0d10e 782 PANTHER PTHR10799:SF686 639 658 4.7E-117 T 21-04-2016 VFU_RS04905 028708eaf0d0e23a22b2076e46c0d10e 782 PANTHER PTHR10799:SF686 371 597 4.7E-117 T 21-04-2016 VFU_RS04905 028708eaf0d0e23a22b2076e46c0d10e 782 SMART SM00267 328 507 7.9E-48 T 21-04-2016 IPR000160 GGDEF domain VFU_RS04905 028708eaf0d0e23a22b2076e46c0d10e 782 SUPERFAMILY SSF141868 523 767 9.94E-69 T 21-04-2016 IPR001633 EAL domain VFU_RS04905 028708eaf0d0e23a22b2076e46c0d10e 782 SMART SM00052 517 760 1.6E-71 T 21-04-2016 IPR001633 EAL domain VFU_RS04905 028708eaf0d0e23a22b2076e46c0d10e 782 PANTHER PTHR10799 639 658 4.7E-117 T 21-04-2016 VFU_RS04905 028708eaf0d0e23a22b2076e46c0d10e 782 PANTHER PTHR10799 371 597 4.7E-117 T 21-04-2016 VFU_RS04905 028708eaf0d0e23a22b2076e46c0d10e 782 Pfam PF00990 Diguanylate cyclase, GGDEF domain 339 503 8.0E-41 T 21-04-2016 IPR000160 GGDEF domain VFU_RS04905 028708eaf0d0e23a22b2076e46c0d10e 782 Gene3D G3DSA:3.30.70.270 341 514 2.3E-45 T 21-04-2016 VFU_RS04905 028708eaf0d0e23a22b2076e46c0d10e 782 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 338 506 5.2E-34 T 21-04-2016 IPR000160 GGDEF domain VFU_RS09020 78a59b7c00a30a844743b3c966897fbc 256 PIRSF PIRSF028069 2 256 2.4E-98 T 21-04-2016 IPR016866 Uncharacterised conserved protein UCP028069 VFU_RS09020 78a59b7c00a30a844743b3c966897fbc 256 Pfam PF11932 Protein of unknown function (DUF3450) 9 249 2.2E-82 T 21-04-2016 IPR016866 Uncharacterised conserved protein UCP028069 VFU_RS14515 01cfab0d3ebddc064d9c584d2da2b491 255 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 6 254 41.357 T 21-04-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 VFU_RS14515 01cfab0d3ebddc064d9c584d2da2b491 255 PANTHER PTHR30457 1 249 1.1E-99 T 21-04-2016 VFU_RS14515 01cfab0d3ebddc064d9c584d2da2b491 255 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 7 237 2.1E-71 T 21-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 VFU_RS14515 01cfab0d3ebddc064d9c584d2da2b491 255 Pfam PF01975 Survival protein SurE 8 186 2.1E-58 T 21-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 VFU_RS14515 01cfab0d3ebddc064d9c584d2da2b491 255 Gene3D G3DSA:3.40.1210.10 5 250 2.0E-88 T 21-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 VFU_RS14515 01cfab0d3ebddc064d9c584d2da2b491 255 SUPERFAMILY SSF64167 6 250 9.94E-86 T 21-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 VFU_RS10815 c191f334f822e85fe99c524f67faaae4 283 SMART SM00481 4 71 1.9E-17 T 21-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 VFU_RS10815 c191f334f822e85fe99c524f67faaae4 283 PANTHER PTHR30007 1 276 1.6E-101 T 21-04-2016 VFU_RS10815 c191f334f822e85fe99c524f67faaae4 283 SUPERFAMILY SSF89550 166 276 2.22E-55 T 21-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 VFU_RS10815 c191f334f822e85fe99c524f67faaae4 283 SUPERFAMILY SSF89550 1 84 2.22E-55 T 21-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 VFU_RS10815 c191f334f822e85fe99c524f67faaae4 283 Gene3D G3DSA:3.20.20.140 1 89 2.2E-46 T 21-04-2016 VFU_RS10815 c191f334f822e85fe99c524f67faaae4 283 Gene3D G3DSA:3.20.20.140 158 262 2.2E-46 T 21-04-2016 VFU_RS10815 c191f334f822e85fe99c524f67faaae4 283 PANTHER PTHR30007:SF4 1 276 1.6E-101 T 21-04-2016 VFU_RS10815 c191f334f822e85fe99c524f67faaae4 283 Pfam PF02811 PHP domain 5 220 2.5E-10 T 21-04-2016 IPR004013 PHP domain GO:0003824 VFU_RS14790 83a799b2b0f20bfdc6dfeef5c4e495a1 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 8.0E-16 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS14790 83a799b2b0f20bfdc6dfeef5c4e495a1 298 PANTHER PTHR30537:SF19 1 290 2.1E-148 T 21-04-2016 VFU_RS14790 83a799b2b0f20bfdc6dfeef5c4e495a1 298 SUPERFAMILY SSF46785 3 87 3.73E-17 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS14790 83a799b2b0f20bfdc6dfeef5c4e495a1 298 Gene3D G3DSA:1.10.10.10 3 87 6.3E-21 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS14790 83a799b2b0f20bfdc6dfeef5c4e495a1 298 Gene3D G3DSA:3.40.190.10 176 245 7.5E-11 T 21-04-2016 VFU_RS14790 83a799b2b0f20bfdc6dfeef5c4e495a1 298 SUPERFAMILY SSF53850 89 295 1.19E-27 T 21-04-2016 VFU_RS14790 83a799b2b0f20bfdc6dfeef5c4e495a1 298 PANTHER PTHR30537 1 290 2.1E-148 T 21-04-2016 VFU_RS14790 83a799b2b0f20bfdc6dfeef5c4e495a1 298 Pfam PF03466 LysR substrate binding domain 89 292 5.4E-26 T 21-04-2016 IPR005119 LysR, substrate-binding VFU_RS14790 83a799b2b0f20bfdc6dfeef5c4e495a1 298 Gene3D G3DSA:3.40.190.10 93 175 4.4E-15 T 21-04-2016 VFU_RS02675 a27679c400ba3ac0d7a93767417dbea0 332 SMART SM00354 6 76 2.4E-27 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VFU_RS02675 a27679c400ba3ac0d7a93767417dbea0 332 SUPERFAMILY SSF53822 64 319 3.64E-58 T 21-04-2016 IPR028082 Periplasmic binding protein-like I VFU_RS02675 a27679c400ba3ac0d7a93767417dbea0 332 PANTHER PTHR30146 6 331 1.9E-155 T 21-04-2016 VFU_RS02675 a27679c400ba3ac0d7a93767417dbea0 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 53 2.0E-16 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VFU_RS02675 a27679c400ba3ac0d7a93767417dbea0 332 SUPERFAMILY SSF47413 6 64 8.84E-14 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VFU_RS02675 a27679c400ba3ac0d7a93767417dbea0 332 Gene3D G3DSA:1.10.260.40 6 61 2.6E-17 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VFU_RS02675 a27679c400ba3ac0d7a93767417dbea0 332 Gene3D G3DSA:3.40.50.2300 63 174 1.1E-38 T 21-04-2016 VFU_RS02675 a27679c400ba3ac0d7a93767417dbea0 332 PANTHER PTHR30146:SF2 6 331 1.9E-155 T 21-04-2016 VFU_RS02675 a27679c400ba3ac0d7a93767417dbea0 332 Gene3D G3DSA:3.40.50.2300 175 331 3.8E-42 T 21-04-2016 VFU_RS02675 a27679c400ba3ac0d7a93767417dbea0 332 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 65 308 3.1E-29 T 21-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain VFU_RS05990 3080248c9beb1ff1b841a05c05e6d310 260 Pfam PF01311 Bacterial export proteins, family 1 13 245 1.5E-57 T 21-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VFU_RS05990 3080248c9beb1ff1b841a05c05e6d310 260 PANTHER PTHR30065 1 257 6.8E-90 T 21-04-2016 VFU_RS05990 3080248c9beb1ff1b841a05c05e6d310 260 PANTHER PTHR30065:SF1 1 257 6.8E-90 T 21-04-2016 VFU_RS05990 3080248c9beb1ff1b841a05c05e6d310 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 12 256 2.0E-75 T 21-04-2016 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 VFU_RS05990 3080248c9beb1ff1b841a05c05e6d310 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 5.3E-16 T 21-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VFU_RS05990 3080248c9beb1ff1b841a05c05e6d310 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 5.3E-16 T 21-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VFU_RS05990 3080248c9beb1ff1b841a05c05e6d310 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 5.3E-16 T 21-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VFU_RS05990 3080248c9beb1ff1b841a05c05e6d310 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 5.3E-16 T 21-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VFU_RS08805 ca5c48c324bd2007b5d7afd992c0fff1 161 Gene3D G3DSA:3.30.420.130 2 97 3.0E-15 T 21-04-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis VFU_RS08805 ca5c48c324bd2007b5d7afd992c0fff1 161 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 9 97 4.1E-14 T 21-04-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis VFU_RS08805 ca5c48c324bd2007b5d7afd992c0fff1 161 SUPERFAMILY SSF53146 1 108 2.22E-17 T 21-04-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis VFU_RS06030 99f8d3ef6b9fa5aeeb5343a01ed20e0e 174 Pfam PF03358 NADPH-dependent FMN reductase 1 132 2.6E-26 T 21-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 VFU_RS06030 99f8d3ef6b9fa5aeeb5343a01ed20e0e 174 SUPERFAMILY SSF52218 1 173 3.71E-35 T 21-04-2016 IPR029039 Flavoprotein-like domain VFU_RS06030 99f8d3ef6b9fa5aeeb5343a01ed20e0e 174 Gene3D G3DSA:3.40.50.360 1 174 4.3E-33 T 21-04-2016 IPR029039 Flavoprotein-like domain VFU_RS06030 99f8d3ef6b9fa5aeeb5343a01ed20e0e 174 PANTHER PTHR30543:SF6 1 173 8.4E-42 T 21-04-2016 VFU_RS06030 99f8d3ef6b9fa5aeeb5343a01ed20e0e 174 PANTHER PTHR30543 1 173 8.4E-42 T 21-04-2016 VFU_RS05125 ac4a858f6999cde78b9bcbaec0be7a37 146 Pfam PF05618 Putative ATP-dependant zinc protease 6 141 2.2E-47 T 21-04-2016 VFU_RS05125 ac4a858f6999cde78b9bcbaec0be7a37 146 Gene3D G3DSA:2.40.70.10 3 134 4.5E-44 T 21-04-2016 IPR021109 Aspartic peptidase domain VFU_RS05125 ac4a858f6999cde78b9bcbaec0be7a37 146 PANTHER PTHR38037 1 145 3.3E-55 T 21-04-2016 VFU_RS05125 ac4a858f6999cde78b9bcbaec0be7a37 146 SUPERFAMILY SSF50630 6 140 2.31E-43 T 21-04-2016 IPR021109 Aspartic peptidase domain VFU_RS10700 5186a18a464225479ca72aa99f93d749 146 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 28 - T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VFU_RS10700 5186a18a464225479ca72aa99f93d749 146 PANTHER PTHR30204:SF0 1 128 3.5E-67 T 21-04-2016 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 VFU_RS10700 5186a18a464225479ca72aa99f93d749 146 SUPERFAMILY SSF46955 3 125 2.49E-29 T 21-04-2016 IPR009061 Putative DNA-binding domain VFU_RS10700 5186a18a464225479ca72aa99f93d749 146 Gene3D G3DSA:1.10.1660.10 57 124 2.5E-14 T 21-04-2016 VFU_RS10700 5186a18a464225479ca72aa99f93d749 146 SMART SM00422 3 71 5.1E-24 T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VFU_RS10700 5186a18a464225479ca72aa99f93d749 146 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 1.5E-13 T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VFU_RS10700 5186a18a464225479ca72aa99f93d749 146 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 1.5E-13 T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VFU_RS10700 5186a18a464225479ca72aa99f93d749 146 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 1.5E-13 T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VFU_RS10700 5186a18a464225479ca72aa99f93d749 146 Pfam PF13411 MerR HTH family regulatory protein 3 69 1.4E-16 T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VFU_RS10700 5186a18a464225479ca72aa99f93d749 146 Gene3D G3DSA:1.10.1660.10 2 56 1.1E-21 T 21-04-2016 VFU_RS10700 5186a18a464225479ca72aa99f93d749 146 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 2 142 1.1E-67 T 21-04-2016 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 VFU_RS10700 5186a18a464225479ca72aa99f93d749 146 PANTHER PTHR30204 1 128 3.5E-67 T 21-04-2016 VFU_RS05320 4473970c684e8f6c6829caa4837a370a 206 Hamap MF_00052_B Ribonuclease HII [rnhB]. 20 199 38.06 T 21-04-2016 IPR022898 Ribonuclease HII GO:0004523 VFU_RS05320 4473970c684e8f6c6829caa4837a370a 206 SUPERFAMILY SSF53098 15 204 3.34E-70 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VFU_RS05320 4473970c684e8f6c6829caa4837a370a 206 Gene3D G3DSA:3.30.420.10 20 161 1.5E-48 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VFU_RS05320 4473970c684e8f6c6829caa4837a370a 206 Pfam PF01351 Ribonuclease HII 22 197 2.7E-38 T 21-04-2016 IPR024567 Ribonuclease HII/HIII domain VFU_RS05320 4473970c684e8f6c6829caa4837a370a 206 PANTHER PTHR10954 17 206 2.4E-81 T 21-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 VFU_RS08285 b262d2df799fd1d94997ec58da70b5dd 377 Gene3D G3DSA:3.20.20.210 3 376 3.9E-107 T 21-04-2016 VFU_RS08285 b262d2df799fd1d94997ec58da70b5dd 377 SUPERFAMILY SSF51726 9 376 1.96E-73 T 21-04-2016 VFU_RS08285 b262d2df799fd1d94997ec58da70b5dd 377 PANTHER PTHR30519:SF3 4 375 8.9E-154 T 21-04-2016 VFU_RS08285 b262d2df799fd1d94997ec58da70b5dd 377 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 175 350 1.6E-6 T 21-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 VFU_RS08285 b262d2df799fd1d94997ec58da70b5dd 377 PANTHER PTHR30519 4 375 8.9E-154 T 21-04-2016 VFU_RS09270 3a0aaebf307ec88d5d2a567d3f29e748 310 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 11 270 57.745 T 21-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 VFU_RS09270 3a0aaebf307ec88d5d2a567d3f29e748 310 PIRSF PIRSF004976 2 272 1.7E-76 T 21-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 VFU_RS09270 3a0aaebf307ec88d5d2a567d3f29e748 310 Pfam PF01171 PP-loop family 43 204 2.2E-15 T 21-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal VFU_RS09270 3a0aaebf307ec88d5d2a567d3f29e748 310 Gene3D G3DSA:3.40.50.620 26 208 1.2E-22 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VFU_RS09270 3a0aaebf307ec88d5d2a567d3f29e748 310 PANTHER PTHR11807:SF16 1 268 3.7E-121 T 21-04-2016 VFU_RS09270 3a0aaebf307ec88d5d2a567d3f29e748 310 SUPERFAMILY SSF52402 29 255 3.05E-56 T 21-04-2016 VFU_RS09270 3a0aaebf307ec88d5d2a567d3f29e748 310 PANTHER PTHR11807 1 268 3.7E-121 T 21-04-2016 VFU_RS02005 47939275c56ece22cd102c30868cfbbb 262 Gene3D G3DSA:3.40.1630.10 2 56 9.7E-27 T 21-04-2016 VFU_RS02005 47939275c56ece22cd102c30868cfbbb 262 SUPERFAMILY SSF53335 10 255 1.79E-75 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS02005 47939275c56ece22cd102c30868cfbbb 262 Gene3D G3DSA:3.40.50.150 57 256 1.5E-77 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS02005 47939275c56ece22cd102c30868cfbbb 262 PANTHER PTHR36112 16 261 2.0E-140 T 21-04-2016 VFU_RS02005 47939275c56ece22cd102c30868cfbbb 262 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 3 256 38.317 T 21-04-2016 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 VFU_RS02005 47939275c56ece22cd102c30868cfbbb 262 Pfam PF04445 Putative SAM-dependent methyltransferase 19 254 3.4E-106 T 21-04-2016 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 VFU_RS02005 47939275c56ece22cd102c30868cfbbb 262 PANTHER PTHR36112:SF1 16 261 2.0E-140 T 21-04-2016 VFU_RS01450 027b2d27dce62d41fd243c78f1f1141a 170 Gene3D G3DSA:3.90.45.10 5 168 1.9E-63 T 21-04-2016 IPR023635 Peptide deformylase VFU_RS01450 027b2d27dce62d41fd243c78f1f1141a 170 PANTHER PTHR10458:SF10 1 169 6.7E-104 T 21-04-2016 VFU_RS01450 027b2d27dce62d41fd243c78f1f1141a 170 Pfam PF01327 Polypeptide deformylase 4 152 4.7E-49 T 21-04-2016 IPR023635 Peptide deformylase VFU_RS01450 027b2d27dce62d41fd243c78f1f1141a 170 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 4.5E-60 T 21-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 VFU_RS01450 027b2d27dce62d41fd243c78f1f1141a 170 PANTHER PTHR10458 1 169 6.7E-104 T 21-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 VFU_RS01450 027b2d27dce62d41fd243c78f1f1141a 170 SUPERFAMILY SSF56420 3 165 6.02E-62 T 21-04-2016 IPR023635 Peptide deformylase VFU_RS01450 027b2d27dce62d41fd243c78f1f1141a 170 Hamap MF_00163 Peptide deformylase [def]. 2 162 30.757 T 21-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 VFU_RS01450 027b2d27dce62d41fd243c78f1f1141a 170 PIRSF PIRSF004749 1 170 1.4E-55 T 21-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 VFU_RS01450 027b2d27dce62d41fd243c78f1f1141a 170 PRINTS PR01576 Peptide deformylase signature 89 100 5.0E-37 T 21-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 VFU_RS01450 027b2d27dce62d41fd243c78f1f1141a 170 PRINTS PR01576 Peptide deformylase signature 120 149 5.0E-37 T 21-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 VFU_RS01450 027b2d27dce62d41fd243c78f1f1141a 170 PRINTS PR01576 Peptide deformylase signature 101 119 5.0E-37 T 21-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 VFU_RS01450 027b2d27dce62d41fd243c78f1f1141a 170 PRINTS PR01576 Peptide deformylase signature 33 62 5.0E-37 T 21-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 VFU_RS09530 7ecf5d811f303fc923461fd4134cc775 149 Pfam PF01641 SelR domain 28 144 5.6E-49 T 21-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 VFU_RS09530 7ecf5d811f303fc923461fd4134cc775 149 SUPERFAMILY SSF51316 23 145 4.66E-55 T 21-04-2016 IPR011057 Mss4-like VFU_RS09530 7ecf5d811f303fc923461fd4134cc775 149 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 24 143 3.6E-51 T 21-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 VFU_RS09530 7ecf5d811f303fc923461fd4134cc775 149 Gene3D G3DSA:2.170.150.20 20 145 8.4E-56 T 21-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 VFU_RS09530 7ecf5d811f303fc923461fd4134cc775 149 PANTHER PTHR10173 22 144 1.7E-51 T 21-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 VFU_RS09530 7ecf5d811f303fc923461fd4134cc775 149 PANTHER PTHR10173:SF18 22 144 1.7E-51 T 21-04-2016 VFU_RS14160 db7ed10922630167b1a844e274e38a86 259 PANTHER PTHR30269 3 255 1.8E-104 T 21-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 VFU_RS14160 db7ed10922630167b1a844e274e38a86 259 Pfam PF01925 Sulfite exporter TauE/SafE 12 246 2.5E-42 T 21-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 VFU_RS14160 db7ed10922630167b1a844e274e38a86 259 PANTHER PTHR30269:SF0 3 255 1.8E-104 T 21-04-2016 VFU_RS14140 0bf8ce2b2b9bf79c5a3d85a5a5d30209 137 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 111 2.4E-8 T 21-04-2016 VFU_RS14140 0bf8ce2b2b9bf79c5a3d85a5a5d30209 137 Gene3D G3DSA:3.10.180.10 5 122 1.0E-20 T 21-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VFU_RS14140 0bf8ce2b2b9bf79c5a3d85a5a5d30209 137 SUPERFAMILY SSF54593 5 125 2.15E-22 T 21-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VFU_RS12855 5b427fa1f64e4b40fc64a382d63d4cfc 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 24.091 T 21-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS VFU_RS12855 5b427fa1f64e4b40fc64a382d63d4cfc 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 1.7E-37 T 21-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS VFU_RS12855 5b427fa1f64e4b40fc64a382d63d4cfc 105 Pfam PF02410 Ribosomal silencing factor during starvation 11 104 7.8E-27 T 21-04-2016 VFU_RS12855 5b427fa1f64e4b40fc64a382d63d4cfc 105 PANTHER PTHR21043 1 105 3.9E-41 T 21-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS VFU_RS12855 5b427fa1f64e4b40fc64a382d63d4cfc 105 SUPERFAMILY SSF81301 3 105 1.8E-36 T 21-04-2016 VFU_RS12855 5b427fa1f64e4b40fc64a382d63d4cfc 105 Gene3D G3DSA:3.30.460.10 3 105 2.5E-37 T 21-04-2016 VFU_RS12680 ab38795fac92970f7c29f7dd4877d7cc 635 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 30 39 - T 21-04-2016 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 VFU_RS12680 ab38795fac92970f7c29f7dd4877d7cc 635 PRINTS PR00775 90kDa heat shock protein signature 177 194 1.1E-62 T 21-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal VFU_RS12680 ab38795fac92970f7c29f7dd4877d7cc 635 PRINTS PR00775 90kDa heat shock protein signature 31 53 1.1E-62 T 21-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal VFU_RS12680 ab38795fac92970f7c29f7dd4877d7cc 635 PRINTS PR00775 90kDa heat shock protein signature 125 147 1.1E-62 T 21-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal VFU_RS12680 ab38795fac92970f7c29f7dd4877d7cc 635 PRINTS PR00775 90kDa heat shock protein signature 10 30 1.1E-62 T 21-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal VFU_RS12680 ab38795fac92970f7c29f7dd4877d7cc 635 PRINTS PR00775 90kDa heat shock protein signature 80 97 1.1E-62 T 21-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal VFU_RS12680 ab38795fac92970f7c29f7dd4877d7cc 635 PRINTS PR00775 90kDa heat shock protein signature 98 115 1.1E-62 T 21-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal VFU_RS12680 ab38795fac92970f7c29f7dd4877d7cc 635 PRINTS PR00775 90kDa heat shock protein signature 195 213 1.1E-62 T 21-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal VFU_RS12680 ab38795fac92970f7c29f7dd4877d7cc 635 Gene3D G3DSA:3.30.565.10 10 245 8.7E-82 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS12680 ab38795fac92970f7c29f7dd4877d7cc 635 PANTHER PTHR11528 2 634 0.0 T 21-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 VFU_RS12680 ab38795fac92970f7c29f7dd4877d7cc 635 PANTHER PTHR11528:SF44 2 634 0.0 T 21-04-2016 VFU_RS12680 ab38795fac92970f7c29f7dd4877d7cc 635 SUPERFAMILY SSF55874 10 217 4.32E-65 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS12680 ab38795fac92970f7c29f7dd4877d7cc 635 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 188 2.4E-14 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS12680 ab38795fac92970f7c29f7dd4877d7cc 635 SUPERFAMILY SSF110942 520 632 2.48E-33 T 21-04-2016 VFU_RS12680 ab38795fac92970f7c29f7dd4877d7cc 635 SUPERFAMILY SSF54211 238 493 5.16E-101 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VFU_RS12680 ab38795fac92970f7c29f7dd4877d7cc 635 SMART SM00387 32 189 4.5E-8 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS12680 ab38795fac92970f7c29f7dd4877d7cc 635 PIRSF PIRSF002583 1 635 6.6E-214 T 21-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 VFU_RS12680 ab38795fac92970f7c29f7dd4877d7cc 635 Pfam PF00183 Hsp90 protein 229 632 4.2E-128 T 21-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 VFU_RS12680 ab38795fac92970f7c29f7dd4877d7cc 635 Hamap MF_00505 Chaperone protein HtpG [htpG]. 7 632 32.454 T 21-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 VFU_RS10890 0e03b0b590c07850929622ad5649306f 324 Gene3D G3DSA:3.30.1330.60 156 260 2.5E-18 T 21-04-2016 IPR006665 OmpA-like domain VFU_RS10890 0e03b0b590c07850929622ad5649306f 324 SUPERFAMILY SSF103088 143 259 2.49E-21 T 21-04-2016 IPR006665 OmpA-like domain VFU_RS10890 0e03b0b590c07850929622ad5649306f 324 Pfam PF00691 OmpA family 157 252 2.5E-13 T 21-04-2016 IPR006665 OmpA-like domain VFU_RS10890 0e03b0b590c07850929622ad5649306f 324 PANTHER PTHR30329:SF2 1 289 5.3E-61 T 21-04-2016 VFU_RS10890 0e03b0b590c07850929622ad5649306f 324 PANTHER PTHR30329 1 289 5.3E-61 T 21-04-2016 VFU_RS10890 0e03b0b590c07850929622ad5649306f 324 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 10 63 4.4E-14 T 21-04-2016 IPR025713 Motility protein B, N-terminal domain VFU_RS13285 44285c2a1e9920b9739cd31f427097ec 310 Gene3D G3DSA:1.10.10.10 58 91 3.6E-5 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS13285 44285c2a1e9920b9739cd31f427097ec 310 SUPERFAMILY SSF52980 159 281 5.25E-19 T 21-04-2016 IPR011335 Restriction endonuclease type II-like VFU_RS13285 44285c2a1e9920b9739cd31f427097ec 310 Pfam PF14338 Mrr N-terminal domain 6 91 8.4E-17 T 21-04-2016 IPR025745 Restriction system protein Mrr-like N-terminal domain VFU_RS13285 44285c2a1e9920b9739cd31f427097ec 310 Pfam PF04471 Restriction endonuclease 157 277 1.7E-33 T 21-04-2016 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 VFU_RS13285 44285c2a1e9920b9739cd31f427097ec 310 Gene3D G3DSA:3.40.1350.10 156 278 3.2E-17 T 21-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 VFU_RS13285 44285c2a1e9920b9739cd31f427097ec 310 PANTHER PTHR30015:SF4 2 304 7.4E-52 T 21-04-2016 VFU_RS13285 44285c2a1e9920b9739cd31f427097ec 310 PANTHER PTHR30015 2 304 7.4E-52 T 21-04-2016 VFU_RS05945 43ecc2ee2a813b5142d83cf973c51123 440 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 24 435 1.8E-193 T 21-04-2016 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VFU_RS05945 43ecc2ee2a813b5142d83cf973c51123 440 SMART SM00382 158 342 7.6E-6 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS05945 43ecc2ee2a813b5142d83cf973c51123 440 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 22 437 6.9E-174 T 21-04-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VFU_RS05945 43ecc2ee2a813b5142d83cf973c51123 440 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 146 357 4.9E-73 T 21-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VFU_RS05945 43ecc2ee2a813b5142d83cf973c51123 440 PANTHER PTHR15184 2 437 6.3E-227 T 21-04-2016 VFU_RS05945 43ecc2ee2a813b5142d83cf973c51123 440 PANTHER PTHR15184:SF9 2 437 6.3E-227 T 21-04-2016 IPR032463 ATPase, type III secretion system, FliI GO:0016887|GO:0030257|GO:0044780 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VFU_RS05945 43ecc2ee2a813b5142d83cf973c51123 440 Gene3D G3DSA:3.40.50.300 95 359 3.5E-92 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS05945 43ecc2ee2a813b5142d83cf973c51123 440 SUPERFAMILY SSF52540 94 362 1.85E-95 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS05945 43ecc2ee2a813b5142d83cf973c51123 440 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 348 357 - T 21-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VFU_RS01800 55c7baf80b6886bb0ecbf1ca5a1d3b15 467 PANTHER PTHR15184 1 467 0.0 T 21-04-2016 VFU_RS01800 55c7baf80b6886bb0ecbf1ca5a1d3b15 467 Gene3D G3DSA:1.10.1140.10 352 467 1.7E-49 T 21-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VFU_RS01800 55c7baf80b6886bb0ecbf1ca5a1d3b15 467 SUPERFAMILY SSF47917 352 466 5.76E-50 T 21-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VFU_RS01800 55c7baf80b6886bb0ecbf1ca5a1d3b15 467 SUPERFAMILY SSF52540 77 355 9.72E-87 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS01800 55c7baf80b6886bb0ecbf1ca5a1d3b15 467 SMART SM00382 142 334 2.5E-4 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS01800 55c7baf80b6886bb0ecbf1ca5a1d3b15 467 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 349 6.8E-61 T 21-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VFU_RS01800 55c7baf80b6886bb0ecbf1ca5a1d3b15 467 SUPERFAMILY SSF50615 1 75 1.96E-24 T 21-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VFU_RS01800 55c7baf80b6886bb0ecbf1ca5a1d3b15 467 Gene3D G3DSA:2.40.10.170 2 75 1.2E-29 T 21-04-2016 VFU_RS01800 55c7baf80b6886bb0ecbf1ca5a1d3b15 467 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 467 55.948 T 21-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VFU_RS01800 55c7baf80b6886bb0ecbf1ca5a1d3b15 467 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 467 7.5E-248 T 21-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VFU_RS01800 55c7baf80b6886bb0ecbf1ca5a1d3b15 467 PANTHER PTHR15184:SF44 1 467 0.0 T 21-04-2016 VFU_RS01800 55c7baf80b6886bb0ecbf1ca5a1d3b15 467 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 340 349 - T 21-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VFU_RS01800 55c7baf80b6886bb0ecbf1ca5a1d3b15 467 Gene3D G3DSA:3.40.50.300 76 350 2.0E-106 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS01800 55c7baf80b6886bb0ecbf1ca5a1d3b15 467 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 73 3.9E-21 T 21-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VFU_RS12665 cfd0fcf1a31433e1896fce8ffef1996e 495 Gene3D G3DSA:1.20.1250.20 11 197 2.0E-18 T 21-04-2016 VFU_RS12665 cfd0fcf1a31433e1896fce8ffef1996e 495 Gene3D G3DSA:1.20.1250.20 270 473 1.8E-8 T 21-04-2016 VFU_RS12665 cfd0fcf1a31433e1896fce8ffef1996e 495 Pfam PF00854 POT family 79 441 3.5E-79 T 21-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 VFU_RS12665 cfd0fcf1a31433e1896fce8ffef1996e 495 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 147 159 - T 21-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 VFU_RS12665 cfd0fcf1a31433e1896fce8ffef1996e 495 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 67 91 - T 21-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 VFU_RS12665 cfd0fcf1a31433e1896fce8ffef1996e 495 PANTHER PTHR11654 5 213 9.0E-220 T 21-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 VFU_RS12665 cfd0fcf1a31433e1896fce8ffef1996e 495 PANTHER PTHR11654 254 491 9.0E-220 T 21-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 VFU_RS12665 cfd0fcf1a31433e1896fce8ffef1996e 495 SUPERFAMILY SSF103473 214 477 1.22E-12 T 21-04-2016 IPR020846 Major facilitator superfamily domain VFU_RS12665 cfd0fcf1a31433e1896fce8ffef1996e 495 PANTHER PTHR11654:SF99 5 213 9.0E-220 T 21-04-2016 VFU_RS12665 cfd0fcf1a31433e1896fce8ffef1996e 495 PANTHER PTHR11654:SF99 254 491 9.0E-220 T 21-04-2016 VFU_RS12665 cfd0fcf1a31433e1896fce8ffef1996e 495 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 6 480 7.4E-133 T 21-04-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 VFU_RS12665 cfd0fcf1a31433e1896fce8ffef1996e 495 SUPERFAMILY SSF103473 3 200 3.4E-19 T 21-04-2016 IPR020846 Major facilitator superfamily domain VFU_RS12580 9f0a66a70a09c267859480291a7058ec 294 SUPERFAMILY SSF103088 158 288 8.11E-25 T 21-04-2016 IPR006665 OmpA-like domain VFU_RS12580 9f0a66a70a09c267859480291a7058ec 294 Gene3D G3DSA:3.30.1330.60 191 289 7.5E-26 T 21-04-2016 IPR006665 OmpA-like domain VFU_RS12580 9f0a66a70a09c267859480291a7058ec 294 Pfam PF00691 OmpA family 191 283 3.3E-18 T 21-04-2016 IPR006665 OmpA-like domain VFU_RS12580 9f0a66a70a09c267859480291a7058ec 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 272 292 2.1E-132 T 21-04-2016 VFU_RS12580 9f0a66a70a09c267859480291a7058ec 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 45 63 2.1E-132 T 21-04-2016 VFU_RS12580 9f0a66a70a09c267859480291a7058ec 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 252 271 2.1E-132 T 21-04-2016 VFU_RS12580 9f0a66a70a09c267859480291a7058ec 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 66 84 2.1E-132 T 21-04-2016 VFU_RS12580 9f0a66a70a09c267859480291a7058ec 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 205 231 2.1E-132 T 21-04-2016 VFU_RS12580 9f0a66a70a09c267859480291a7058ec 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 3 27 2.1E-132 T 21-04-2016 VFU_RS12580 9f0a66a70a09c267859480291a7058ec 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 123 145 2.1E-132 T 21-04-2016 VFU_RS12580 9f0a66a70a09c267859480291a7058ec 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 85 103 2.1E-132 T 21-04-2016 VFU_RS12580 9f0a66a70a09c267859480291a7058ec 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 104 121 2.1E-132 T 21-04-2016 VFU_RS12580 9f0a66a70a09c267859480291a7058ec 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 148 167 2.1E-132 T 21-04-2016 VFU_RS12580 9f0a66a70a09c267859480291a7058ec 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 28 44 2.1E-132 T 21-04-2016 VFU_RS12580 9f0a66a70a09c267859480291a7058ec 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 234 251 2.1E-132 T 21-04-2016 VFU_RS12580 9f0a66a70a09c267859480291a7058ec 294 PANTHER PTHR30128:SF10 18 289 1.8E-79 T 21-04-2016 VFU_RS12580 9f0a66a70a09c267859480291a7058ec 294 PANTHER PTHR30128 18 289 1.8E-79 T 21-04-2016 VFU_RS13225 a11f0bd5ab7d265387fc65b328da995e 169 PIRSF PIRSF024622 1 169 1.4E-61 T 21-04-2016 IPR016824 Tfp pilus assembly protein FimT VFU_RS13225 a11f0bd5ab7d265387fc65b328da995e 169 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 3 23 - T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site VFU_RS13225 a11f0bd5ab7d265387fc65b328da995e 169 Pfam PF12019 Type II transport protein GspH 41 143 2.6E-10 T 21-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 VFU_RS13225 a11f0bd5ab7d265387fc65b328da995e 169 Gene3D G3DSA:3.30.700.10 5 52 2.4E-5 T 21-04-2016 VFU_RS13225 a11f0bd5ab7d265387fc65b328da995e 169 SUPERFAMILY SSF54523 5 81 1.96E-13 T 21-04-2016 VFU_RS13225 a11f0bd5ab7d265387fc65b328da995e 169 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 21 4.6E-5 T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site VFU_RS13225 a11f0bd5ab7d265387fc65b328da995e 169 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 25 2.8E-6 T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site VFU_RS06115 edd39068598653e948dcabeb9daab995 429 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 21-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 VFU_RS06115 edd39068598653e948dcabeb9daab995 429 Gene3D G3DSA:1.10.230.10 281 373 4.5E-44 T 21-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain VFU_RS06115 edd39068598653e948dcabeb9daab995 429 Gene3D G3DSA:1.10.580.10 52 280 7.2E-98 T 21-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 VFU_RS06115 edd39068598653e948dcabeb9daab995 429 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 15 422 3.3E-239 T 21-04-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 UniPathway: UPA00223 VFU_RS06115 edd39068598653e948dcabeb9daab995 429 PANTHER PTHR11739 39 429 1.0E-206 T 21-04-2016 IPR002020 Citrate synthase GO:0046912 VFU_RS06115 edd39068598653e948dcabeb9daab995 429 PIRSF PIRSF001369 38 429 1.0E-172 T 21-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 VFU_RS06115 edd39068598653e948dcabeb9daab995 429 Pfam PF00285 Citrate synthase, C-terminal domain 49 411 2.5E-134 T 21-04-2016 IPR002020 Citrate synthase GO:0046912 VFU_RS06115 edd39068598653e948dcabeb9daab995 429 SUPERFAMILY SSF48256 4 428 1.02E-169 T 21-04-2016 IPR002020 Citrate synthase GO:0046912 VFU_RS06115 edd39068598653e948dcabeb9daab995 429 PRINTS PR00143 Citrate synthase signature 379 393 3.6E-55 T 21-04-2016 IPR002020 Citrate synthase GO:0046912 VFU_RS06115 edd39068598653e948dcabeb9daab995 429 PRINTS PR00143 Citrate synthase signature 165 178 3.6E-55 T 21-04-2016 IPR002020 Citrate synthase GO:0046912 VFU_RS06115 edd39068598653e948dcabeb9daab995 429 PRINTS PR00143 Citrate synthase signature 219 234 3.6E-55 T 21-04-2016 IPR002020 Citrate synthase GO:0046912 VFU_RS06115 edd39068598653e948dcabeb9daab995 429 PRINTS PR00143 Citrate synthase signature 359 375 3.6E-55 T 21-04-2016 IPR002020 Citrate synthase GO:0046912 VFU_RS06115 edd39068598653e948dcabeb9daab995 429 PRINTS PR00143 Citrate synthase signature 296 316 3.6E-55 T 21-04-2016 IPR002020 Citrate synthase GO:0046912 VFU_RS06115 edd39068598653e948dcabeb9daab995 429 PRINTS PR00143 Citrate synthase signature 241 269 3.6E-55 T 21-04-2016 IPR002020 Citrate synthase GO:0046912 VFU_RS00870 7d6f1088c2588014bac55fc6583dcc96 288 PANTHER PTHR30636 1 288 2.0E-114 T 21-04-2016 VFU_RS00870 7d6f1088c2588014bac55fc6583dcc96 288 Pfam PF08340 Domain of unknown function (DUF1732) 204 288 6.4E-35 T 21-04-2016 IPR013551 Domain of unknown function DUF1732 VFU_RS00870 7d6f1088c2588014bac55fc6583dcc96 288 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 288 2.0E-119 T 21-04-2016 IPR005229 Conserved hypothetical protein CHP00255 VFU_RS00870 7d6f1088c2588014bac55fc6583dcc96 288 Pfam PF03755 YicC-like family, N-terminal region 2 154 2.1E-43 T 21-04-2016 IPR013527 YicC-like, N-terminal VFU_RS05400 d7507c8ebb27df5b89d86385ed4d9ec3 281 PANTHER PTHR11907 1 259 7.2E-129 T 21-04-2016 VFU_RS05400 d7507c8ebb27df5b89d86385ed4d9ec3 281 PANTHER PTHR11907:SF10 1 259 7.2E-129 T 21-04-2016 VFU_RS05400 d7507c8ebb27df5b89d86385ed4d9ec3 281 SUPERFAMILY SSF56235 2 253 9.44E-52 T 21-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VFU_RS05400 d7507c8ebb27df5b89d86385ed4d9ec3 281 Pfam PF13230 Glutamine amidotransferases class-II 1 255 2.5E-113 T 21-04-2016 IPR026869 Putative glutamine amidotransferase type 2 VFU_RS05400 d7507c8ebb27df5b89d86385ed4d9ec3 281 Gene3D G3DSA:3.60.20.10 1 251 3.0E-68 T 21-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VFU_RS00540 637f4602e7e1c34ce7161499cf322fae 439 PANTHER PTHR11203:SF11 1 431 7.9E-124 T 21-04-2016 VFU_RS00540 637f4602e7e1c34ce7161499cf322fae 439 PANTHER PTHR11203 1 431 7.9E-124 T 21-04-2016 VFU_RS00540 637f4602e7e1c34ce7161499cf322fae 439 Pfam PF10996 Beta-Casp domain 234 364 3.2E-26 T 21-04-2016 IPR022712 Beta-Casp domain VFU_RS00540 637f4602e7e1c34ce7161499cf322fae 439 SUPERFAMILY SSF56281 1 434 1.09E-123 T 21-04-2016 IPR001279 Metallo-beta-lactamase VFU_RS00540 637f4602e7e1c34ce7161499cf322fae 439 Gene3D G3DSA:3.60.15.10 2 240 8.6E-42 T 21-04-2016 IPR001279 Metallo-beta-lactamase VFU_RS00540 637f4602e7e1c34ce7161499cf322fae 439 SMART SM00849 13 209 1.4E-16 T 21-04-2016 IPR001279 Metallo-beta-lactamase VFU_RS00540 637f4602e7e1c34ce7161499cf322fae 439 Pfam PF00753 Metallo-beta-lactamase superfamily 18 227 5.2E-13 T 21-04-2016 IPR001279 Metallo-beta-lactamase VFU_RS00540 637f4602e7e1c34ce7161499cf322fae 439 SMART SM01027 234 364 8.4E-53 T 21-04-2016 IPR022712 Beta-Casp domain VFU_RS00540 637f4602e7e1c34ce7161499cf322fae 439 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 378 437 3.8E-15 T 21-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain VFU_RS09765 c82b40f04baa0247948ead52fa3dbc9b 202 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 76 183 5.7E-10 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 VFU_RS09765 c82b40f04baa0247948ead52fa3dbc9b 202 SUPERFAMILY SSF56784 4 193 7.4E-30 T 21-04-2016 IPR023214 HAD-like domain VFU_RS09765 c82b40f04baa0247948ead52fa3dbc9b 202 Gene3D G3DSA:3.40.50.1000 1 198 1.8E-33 T 21-04-2016 IPR023214 HAD-like domain VFU_RS09765 c82b40f04baa0247948ead52fa3dbc9b 202 Pfam PF13419 Haloacid dehalogenase-like hydrolase 84 182 8.2E-9 T 21-04-2016 IPR023214 HAD-like domain VFU_RS09765 c82b40f04baa0247948ead52fa3dbc9b 202 PANTHER PTHR12725 1 200 4.7E-39 T 21-04-2016 VFU_RS09765 c82b40f04baa0247948ead52fa3dbc9b 202 PANTHER PTHR12725:SF63 1 200 4.7E-39 T 21-04-2016 VFU_RS08855 f5f9fa94499213061c72ecd70438a597 199 PANTHER PTHR30086 1 199 1.6E-33 T 21-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VFU_RS08855 f5f9fa94499213061c72ecd70438a597 199 PANTHER PTHR30086:SF12 1 199 1.6E-33 T 21-04-2016 VFU_RS08855 f5f9fa94499213061c72ecd70438a597 199 Pfam PF01810 LysE type translocator 14 191 1.7E-18 T 21-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VFU_RS21870 28042c79f84f8159e56ceb150973f58d 195 PANTHER PTHR30136:SF13 4 160 1.2E-31 T 21-04-2016 VFU_RS21870 28042c79f84f8159e56ceb150973f58d 195 Pfam PF09339 IclR helix-turn-helix domain 5 55 2.7E-10 T 21-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 VFU_RS21870 28042c79f84f8159e56ceb150973f58d 195 SUPERFAMILY SSF55781 69 194 6.21E-17 T 21-04-2016 IPR029016 GAF domain-like VFU_RS21870 28042c79f84f8159e56ceb150973f58d 195 PANTHER PTHR30136 4 160 1.2E-31 T 21-04-2016 VFU_RS21870 28042c79f84f8159e56ceb150973f58d 195 Gene3D G3DSA:3.30.450.40 78 195 1.1E-18 T 21-04-2016 IPR029016 GAF domain-like VFU_RS21870 28042c79f84f8159e56ceb150973f58d 195 SMART SM00346 3 93 5.9E-10 T 21-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 VFU_RS21870 28042c79f84f8159e56ceb150973f58d 195 Gene3D G3DSA:1.10.10.10 2 74 2.0E-18 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS21870 28042c79f84f8159e56ceb150973f58d 195 SUPERFAMILY SSF46785 5 72 9.73E-14 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS08260 67343eebad7ecca046e133188e1ec859 365 PRINTS PR00164 ABC-2 type transport system membrane protein signature 307 326 3.2E-6 T 21-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 VFU_RS08260 67343eebad7ecca046e133188e1ec859 365 PRINTS PR00164 ABC-2 type transport system membrane protein signature 250 274 3.2E-6 T 21-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 VFU_RS08260 67343eebad7ecca046e133188e1ec859 365 PRINTS PR00164 ABC-2 type transport system membrane protein signature 287 306 3.2E-6 T 21-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 VFU_RS08260 67343eebad7ecca046e133188e1ec859 365 PANTHER PTHR30294:SF12 1 363 1.0E-104 T 21-04-2016 VFU_RS08260 67343eebad7ecca046e133188e1ec859 365 Pfam PF12698 ABC-2 family transporter protein 24 355 5.1E-47 T 21-04-2016 VFU_RS08260 67343eebad7ecca046e133188e1ec859 365 PANTHER PTHR30294 1 363 1.0E-104 T 21-04-2016 VFU_RS12955 1556ed263ff46c82af78f10e3dbeb3bd 499 Pfam PF07730 Histidine kinase 304 368 3.6E-11 T 21-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 VFU_RS12955 1556ed263ff46c82af78f10e3dbeb3bd 499 PANTHER PTHR24421:SF1 167 498 1.7E-53 T 21-04-2016 VFU_RS12955 1556ed263ff46c82af78f10e3dbeb3bd 499 Gene3D G3DSA:3.30.565.10 369 498 1.0E-9 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS12955 1556ed263ff46c82af78f10e3dbeb3bd 499 Pfam PF05231 MASE1 16 276 2.0E-16 T 21-04-2016 IPR007895 MASE1 VFU_RS12955 1556ed263ff46c82af78f10e3dbeb3bd 499 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 411 497 3.8E-7 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS12955 1556ed263ff46c82af78f10e3dbeb3bd 499 SUPERFAMILY SSF55874 372 497 1.44E-17 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS12955 1556ed263ff46c82af78f10e3dbeb3bd 499 SMART SM00387 407 499 4.3E-8 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS12955 1556ed263ff46c82af78f10e3dbeb3bd 499 PANTHER PTHR24421 167 498 1.7E-53 T 21-04-2016 VFU_RS04430 f3c49abbe9fd023f438d91ea2713d0bf 337 SUPERFAMILY SSF53850 23 334 3.76E-71 T 21-04-2016 VFU_RS04430 f3c49abbe9fd023f438d91ea2713d0bf 337 Gene3D G3DSA:3.40.190.10 124 267 9.3E-49 T 21-04-2016 VFU_RS04430 f3c49abbe9fd023f438d91ea2713d0bf 337 Pfam PF13343 Bacterial extracellular solute-binding protein 73 298 2.8E-17 T 21-04-2016 VFU_RS04430 f3c49abbe9fd023f438d91ea2713d0bf 337 PIRSF PIRSF002825 2 337 1.2E-95 T 21-04-2016 IPR026045 Ferric binding protein VFU_RS04430 f3c49abbe9fd023f438d91ea2713d0bf 337 PANTHER PTHR30006:SF4 1 337 3.3E-194 T 21-04-2016 VFU_RS04430 f3c49abbe9fd023f438d91ea2713d0bf 337 Gene3D G3DSA:3.40.190.10 268 313 1.2E-27 T 21-04-2016 VFU_RS04430 f3c49abbe9fd023f438d91ea2713d0bf 337 Gene3D G3DSA:3.40.190.10 1 119 1.2E-27 T 21-04-2016 VFU_RS04430 f3c49abbe9fd023f438d91ea2713d0bf 337 PANTHER PTHR30006 1 337 3.3E-194 T 21-04-2016 VFU_RS08640 1f7274cca342ec1b461b29ac11e68371 399 Gene3D G3DSA:3.40.640.10 48 318 8.9E-103 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VFU_RS08640 1f7274cca342ec1b461b29ac11e68371 399 PRINTS PR00799 Aspartate aminotransferase signature 178 197 8.7E-39 T 21-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VFU_RS08640 1f7274cca342ec1b461b29ac11e68371 399 PRINTS PR00799 Aspartate aminotransferase signature 209 221 8.7E-39 T 21-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VFU_RS08640 1f7274cca342ec1b461b29ac11e68371 399 PRINTS PR00799 Aspartate aminotransferase signature 276 301 8.7E-39 T 21-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VFU_RS08640 1f7274cca342ec1b461b29ac11e68371 399 PRINTS PR00799 Aspartate aminotransferase signature 344 362 8.7E-39 T 21-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VFU_RS08640 1f7274cca342ec1b461b29ac11e68371 399 Pfam PF00155 Aminotransferase class I and II 30 395 9.4E-81 T 21-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VFU_RS08640 1f7274cca342ec1b461b29ac11e68371 399 PANTHER PTHR11879:SF11 1 398 2.6E-263 T 21-04-2016 VFU_RS08640 1f7274cca342ec1b461b29ac11e68371 399 PANTHER PTHR11879 1 398 2.6E-263 T 21-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VFU_RS08640 1f7274cca342ec1b461b29ac11e68371 399 SUPERFAMILY SSF53383 2 398 6.8E-111 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VFU_RS08640 1f7274cca342ec1b461b29ac11e68371 399 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 246 259 - T 21-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 VFU_RS06055 201f75ecdd46e4ff9a950302d499d7af 149 Pfam PF01475 Ferric uptake regulator family 11 130 1.3E-46 T 21-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 VFU_RS06055 201f75ecdd46e4ff9a950302d499d7af 149 Gene3D G3DSA:1.10.10.10 2 82 9.9E-31 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS06055 201f75ecdd46e4ff9a950302d499d7af 149 PANTHER PTHR33202 1 135 1.3E-45 T 21-04-2016 VFU_RS06055 201f75ecdd46e4ff9a950302d499d7af 149 SUPERFAMILY SSF46785 5 135 1.77E-43 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS06615 d822f551240b5d76db39f2e575e6b6b1 224 Gene3D G3DSA:3.40.50.300 46 155 1.6E-34 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS06615 d822f551240b5d76db39f2e575e6b6b1 224 PIRSF PIRSF037290 1 222 8.5E-57 T 21-04-2016 IPR017166 Uncharacterised conserved protein UCP037290 VFU_RS06615 d822f551240b5d76db39f2e575e6b6b1 224 PANTHER PTHR35369:SF1 26 189 3.0E-21 T 21-04-2016 VFU_RS06615 d822f551240b5d76db39f2e575e6b6b1 224 SUPERFAMILY SSF52540 47 155 3.1E-26 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS06615 d822f551240b5d76db39f2e575e6b6b1 224 PANTHER PTHR35369 26 189 3.0E-21 T 21-04-2016 VFU_RS12780 00bc8f9c8af73be750f5762836e7326e 248 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 5 245 29.053 T 21-04-2016 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 VFU_RS12780 00bc8f9c8af73be750f5762836e7326e 248 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 11 227 4.3E-42 T 21-04-2016 VFU_RS12780 00bc8f9c8af73be750f5762836e7326e 248 PANTHER PTHR37468 1 245 2.1E-102 T 21-04-2016 VFU_RS13060 aad256a6e2d091088c764ab1a5762e18 310 SUPERFAMILY SSF46785 3 85 3.27E-23 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS13060 aad256a6e2d091088c764ab1a5762e18 310 SUPERFAMILY SSF53850 92 296 8.87E-39 T 21-04-2016 VFU_RS13060 aad256a6e2d091088c764ab1a5762e18 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.9E-10 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS13060 aad256a6e2d091088c764ab1a5762e18 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.9E-10 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS13060 aad256a6e2d091088c764ab1a5762e18 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.9E-10 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS13060 aad256a6e2d091088c764ab1a5762e18 310 Gene3D G3DSA:1.10.10.10 1 86 7.5E-28 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS13060 aad256a6e2d091088c764ab1a5762e18 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 2.7E-21 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS13060 aad256a6e2d091088c764ab1a5762e18 310 Gene3D G3DSA:3.40.190.10 180 259 2.8E-16 T 21-04-2016 VFU_RS13060 aad256a6e2d091088c764ab1a5762e18 310 Gene3D G3DSA:3.40.190.10 94 179 5.1E-34 T 21-04-2016 VFU_RS13060 aad256a6e2d091088c764ab1a5762e18 310 PANTHER PTHR30537 1 306 4.3E-153 T 21-04-2016 VFU_RS13060 aad256a6e2d091088c764ab1a5762e18 310 Pfam PF03466 LysR substrate binding domain 91 291 5.1E-37 T 21-04-2016 IPR005119 LysR, substrate-binding VFU_RS13060 aad256a6e2d091088c764ab1a5762e18 310 PANTHER PTHR30537:SF26 1 306 4.3E-153 T 21-04-2016 VFU_RS12355 8510592b3892a099cb4ebdefbec40b70 181 PANTHER PTHR32315 1 181 6.4E-82 T 21-04-2016 VFU_RS12355 8510592b3892a099cb4ebdefbec40b70 181 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 9 177 8.7E-73 T 21-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 VFU_RS12355 8510592b3892a099cb4ebdefbec40b70 181 Gene3D G3DSA:3.40.50.2020 5 179 1.5E-68 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like VFU_RS12355 8510592b3892a099cb4ebdefbec40b70 181 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 9 178 37.806 T 21-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 VFU_RS12355 8510592b3892a099cb4ebdefbec40b70 181 Pfam PF00156 Phosphoribosyl transferase domain 31 154 2.2E-13 T 21-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 VFU_RS12355 8510592b3892a099cb4ebdefbec40b70 181 SUPERFAMILY SSF53271 11 178 1.99E-51 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like VFU_RS14915 216fda34c23e87dcc5b03357ebf4703a 91 Gene3D G3DSA:1.10.3880.10 1 90 8.9E-45 T 21-04-2016 VFU_RS14915 216fda34c23e87dcc5b03357ebf4703a 91 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 2.1E-42 T 21-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VFU_RS14915 216fda34c23e87dcc5b03357ebf4703a 91 PANTHER PTHR36965 2 91 6.5E-56 T 21-04-2016 VFU_RS14915 216fda34c23e87dcc5b03357ebf4703a 91 PIRSF PIRSF029827 1 90 7.6E-44 T 21-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VFU_RS14915 216fda34c23e87dcc5b03357ebf4703a 91 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.606 T 21-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VFU_RS14915 216fda34c23e87dcc5b03357ebf4703a 91 PANTHER PTHR36965:SF1 2 91 6.5E-56 T 21-04-2016 VFU_RS14915 216fda34c23e87dcc5b03357ebf4703a 91 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 3.0E-37 T 21-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VFU_RS14915 216fda34c23e87dcc5b03357ebf4703a 91 SUPERFAMILY SSF111148 1 90 3.53E-41 T 21-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VFU_RS04230 dcf1ece63e7473210ed49362b9a5ce9d 273 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 204 259 7.0E-23 T 21-04-2016 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 VFU_RS04230 dcf1ece63e7473210ed49362b9a5ce9d 273 PANTHER PTHR12905 49 273 1.2E-98 T 21-04-2016 VFU_RS04230 dcf1ece63e7473210ed49362b9a5ce9d 273 PANTHER PTHR12905:SF7 7 33 1.2E-98 T 21-04-2016 VFU_RS04230 dcf1ece63e7473210ed49362b9a5ce9d 273 Pfam PF00149 Calcineurin-like phosphoesterase 14 205 9.6E-14 T 21-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 VFU_RS04230 dcf1ece63e7473210ed49362b9a5ce9d 273 PANTHER PTHR12905:SF7 49 273 1.2E-98 T 21-04-2016 VFU_RS04230 dcf1ece63e7473210ed49362b9a5ce9d 273 PANTHER PTHR12905 7 33 1.2E-98 T 21-04-2016 VFU_RS04230 dcf1ece63e7473210ed49362b9a5ce9d 273 Gene3D G3DSA:3.60.21.10 10 257 5.7E-44 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like VFU_RS04230 dcf1ece63e7473210ed49362b9a5ce9d 273 SUPERFAMILY SSF56300 11 258 8.51E-60 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like VFU_RS04230 dcf1ece63e7473210ed49362b9a5ce9d 273 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 13 259 42.68 T 21-04-2016 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 VFU_RS11115 135bed77748059d2958da5e9c5ffe18e 511 SMART SM00052 244 489 7.3E-81 T 21-04-2016 IPR001633 EAL domain VFU_RS11115 135bed77748059d2958da5e9c5ffe18e 511 PANTHER PTHR33121 192 492 2.1E-73 T 21-04-2016 VFU_RS11115 135bed77748059d2958da5e9c5ffe18e 511 Pfam PF00563 EAL domain 251 484 1.7E-57 T 21-04-2016 IPR001633 EAL domain VFU_RS11115 135bed77748059d2958da5e9c5ffe18e 511 Gene3D G3DSA:3.20.20.450 248 491 8.8E-70 T 21-04-2016 IPR001633 EAL domain VFU_RS11115 135bed77748059d2958da5e9c5ffe18e 511 SUPERFAMILY SSF141868 250 496 1.44E-67 T 21-04-2016 IPR001633 EAL domain VFU_RS11115 135bed77748059d2958da5e9c5ffe18e 511 PANTHER PTHR33121:SF1 192 492 2.1E-73 T 21-04-2016 VFU_RS06750 fb1b49d7a574f963bfa9aa863175324a 144 Pfam PF00460 Flagella basal body rod protein 9 32 3.5E-6 T 21-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VFU_RS06750 fb1b49d7a574f963bfa9aa863175324a 144 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 96 139 1.9E-9 T 21-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VFU_RS06750 fb1b49d7a574f963bfa9aa863175324a 144 PANTHER PTHR30435 1 142 2.4E-51 T 21-04-2016 VFU_RS06750 fb1b49d7a574f963bfa9aa863175324a 144 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 7 142 4.2E-40 T 21-04-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 VFU_RS06750 fb1b49d7a574f963bfa9aa863175324a 144 PANTHER PTHR30435:SF2 1 142 2.4E-51 T 21-04-2016 VFU_RS13270 6d63d44e438c822d439804d2133bcb9a 119 Gene3D G3DSA:3.10.20.280 2 92 1.0E-37 T 21-04-2016 IPR005346 RnfH protein VFU_RS13270 6d63d44e438c822d439804d2133bcb9a 119 PANTHER PTHR37483 5 110 7.5E-44 T 21-04-2016 VFU_RS13270 6d63d44e438c822d439804d2133bcb9a 119 Pfam PF03658 RnfH family Ubiquitin 8 90 7.6E-34 T 21-04-2016 IPR005346 RnfH protein VFU_RS13270 6d63d44e438c822d439804d2133bcb9a 119 SUPERFAMILY SSF54285 6 82 6.54E-26 T 21-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VFU_RS13270 6d63d44e438c822d439804d2133bcb9a 119 Hamap MF_00460 Protein RnfH [rnfH]. 8 98 25.253 T 21-04-2016 IPR005346 RnfH protein VFU_RS13270 6d63d44e438c822d439804d2133bcb9a 119 PANTHER PTHR37483:SF1 5 110 7.5E-44 T 21-04-2016 VFU_RS10040 be81b2518ffe065e93de2e13b7d8c889 580 Pfam PF00374 Nickel-dependent hydrogenase 225 293 3.8E-11 T 21-04-2016 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 VFU_RS10040 be81b2518ffe065e93de2e13b7d8c889 580 PANTHER PTHR11993 131 553 3.4E-254 T 21-04-2016 VFU_RS10040 be81b2518ffe065e93de2e13b7d8c889 580 PANTHER PTHR11993:SF30 131 553 3.4E-254 T 21-04-2016 VFU_RS10040 be81b2518ffe065e93de2e13b7d8c889 580 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 94 158 3.0E-25 T 21-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 VFU_RS10040 be81b2518ffe065e93de2e13b7d8c889 580 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 223 234 - T 21-04-2016 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 VFU_RS10040 be81b2518ffe065e93de2e13b7d8c889 580 SUPERFAMILY SSF56762 200 546 3.27E-103 T 21-04-2016 IPR029014 NiFe hydrogenase-like VFU_RS10040 be81b2518ffe065e93de2e13b7d8c889 580 Gene3D G3DSA:1.10.645.10 173 545 4.3E-82 T 21-04-2016 IPR029014 NiFe hydrogenase-like VFU_RS10040 be81b2518ffe065e93de2e13b7d8c889 580 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 302 476 2.6E-34 T 21-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 VFU_RS10040 be81b2518ffe065e93de2e13b7d8c889 580 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 480 546 1.5E-11 T 21-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 VFU_RS10040 be81b2518ffe065e93de2e13b7d8c889 580 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 43 159 3.4E-22 T 21-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 VFU_RS10040 be81b2518ffe065e93de2e13b7d8c889 580 SUPERFAMILY SSF143243 17 201 2.09E-44 T 21-04-2016 VFU_RS16625 70f5bb79634363acd60b94da2d5684a7 211 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 12 30 1.7E-17 T 21-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VFU_RS16625 70f5bb79634363acd60b94da2d5684a7 211 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 30 49 1.7E-17 T 21-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VFU_RS16625 70f5bb79634363acd60b94da2d5684a7 211 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 132 148 1.7E-17 T 21-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VFU_RS16625 70f5bb79634363acd60b94da2d5684a7 211 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 162 181 1.7E-17 T 21-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VFU_RS16625 70f5bb79634363acd60b94da2d5684a7 211 SUPERFAMILY SSF56235 6 210 1.89E-59 T 21-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VFU_RS16625 70f5bb79634363acd60b94da2d5684a7 211 PANTHER PTHR11686:SF27 3 211 5.4E-103 T 21-04-2016 VFU_RS16625 70f5bb79634363acd60b94da2d5684a7 211 Pfam PF01019 Gamma-glutamyltranspeptidase 5 210 2.4E-59 T 21-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VFU_RS16625 70f5bb79634363acd60b94da2d5684a7 211 PANTHER PTHR11686 3 211 5.4E-103 T 21-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VFU_RS15320 38e6cf8b6bdbe039a34cd9cc1fa4f437 316 PIRSF PIRSF006621 1 314 6.5E-72 T 21-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VFU_RS15320 38e6cf8b6bdbe039a34cd9cc1fa4f437 316 SUPERFAMILY SSF51395 1 308 2.0E-72 T 21-04-2016 VFU_RS15320 38e6cf8b6bdbe039a34cd9cc1fa4f437 316 PANTHER PTHR11082:SF29 1 315 2.7E-160 T 21-04-2016 VFU_RS15320 38e6cf8b6bdbe039a34cd9cc1fa4f437 316 Pfam PF01207 Dihydrouridine synthase (Dus) 1 306 1.3E-92 T 21-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VFU_RS15320 38e6cf8b6bdbe039a34cd9cc1fa4f437 316 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 1 308 2.1E-155 T 21-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 VFU_RS15320 38e6cf8b6bdbe039a34cd9cc1fa4f437 316 PANTHER PTHR11082 1 315 2.7E-160 T 21-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VFU_RS15320 38e6cf8b6bdbe039a34cd9cc1fa4f437 316 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 1 311 50.166 T 21-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 VFU_RS15320 38e6cf8b6bdbe039a34cd9cc1fa4f437 316 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 76 94 - T 21-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 VFU_RS15320 38e6cf8b6bdbe039a34cd9cc1fa4f437 316 Gene3D G3DSA:3.20.20.70 1 235 2.8E-72 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS10095 c4186f275996e8b2a7341acc38d84434 479 PANTHER PTHR30026 6 474 5.7E-208 T 21-04-2016 VFU_RS10095 c4186f275996e8b2a7341acc38d84434 479 Gene3D G3DSA:1.20.1600.10 22 444 3.1E-50 T 21-04-2016 VFU_RS10095 c4186f275996e8b2a7341acc38d84434 479 Pfam PF02321 Outer membrane efflux protein 26 243 2.3E-21 T 21-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VFU_RS10095 c4186f275996e8b2a7341acc38d84434 479 Pfam PF02321 Outer membrane efflux protein 266 445 3.7E-23 T 21-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VFU_RS10095 c4186f275996e8b2a7341acc38d84434 479 SUPERFAMILY SSF56954 107 446 3.27E-66 T 21-04-2016 VFU_RS10095 c4186f275996e8b2a7341acc38d84434 479 SUPERFAMILY SSF56954 2 77 3.27E-66 T 21-04-2016 VFU_RS10095 c4186f275996e8b2a7341acc38d84434 479 PANTHER PTHR30026:SF5 6 474 5.7E-208 T 21-04-2016 VFU_RS09500 7bf3929eb5fb15d22874616c412e80c5 278 PIRSF PIRSF012524 1 278 1.4E-100 T 21-04-2016 IPR014464 Conserved virulence factor B VFU_RS09500 7bf3929eb5fb15d22874616c412e80c5 278 PANTHER PTHR37296 1 278 3.9E-111 T 21-04-2016 VFU_RS09500 7bf3929eb5fb15d22874616c412e80c5 278 Pfam PF13509 S1 domain 4 64 1.8E-21 T 21-04-2016 VFU_RS09500 7bf3929eb5fb15d22874616c412e80c5 278 Pfam PF13509 S1 domain 71 132 9.6E-5 T 21-04-2016 VFU_RS10035 17143072f87484ae3b3dc64869266269 192 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VFU_RS10035 17143072f87484ae3b3dc64869266269 192 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VFU_RS10035 17143072f87484ae3b3dc64869266269 192 Gene3D G3DSA:3.30.70.20 82 121 1.3E-6 T 21-04-2016 VFU_RS10035 17143072f87484ae3b3dc64869266269 192 Gene3D G3DSA:3.30.70.20 6 81 6.7E-21 T 21-04-2016 VFU_RS10035 17143072f87484ae3b3dc64869266269 192 Pfam PF12838 4Fe-4S dicluster domain 39 89 1.8E-13 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VFU_RS10035 17143072f87484ae3b3dc64869266269 192 PANTHER PTHR10849:SF11 1 139 2.9E-54 T 21-04-2016 VFU_RS10035 17143072f87484ae3b3dc64869266269 192 SUPERFAMILY SSF54862 18 118 1.13E-22 T 21-04-2016 VFU_RS10035 17143072f87484ae3b3dc64869266269 192 PANTHER PTHR10849 1 139 2.9E-54 T 21-04-2016 VFU_RS07670 918472000aa91e740538482b5f8f1fc8 301 PANTHER PTHR21091:SF16 41 275 6.0E-76 T 21-04-2016 VFU_RS07670 918472000aa91e740538482b5f8f1fc8 301 PANTHER PTHR21091 41 275 6.0E-76 T 21-04-2016 VFU_RS07670 918472000aa91e740538482b5f8f1fc8 301 Gene3D G3DSA:3.30.950.10 160 282 3.4E-37 T 21-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 VFU_RS07670 918472000aa91e740538482b5f8f1fc8 301 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 44 278 5.7E-87 T 21-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 VFU_RS07670 918472000aa91e740538482b5f8f1fc8 301 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 124 157 - T 21-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 VFU_RS07670 918472000aa91e740538482b5f8f1fc8 301 SUPERFAMILY SSF53790 41 282 1.83E-70 T 21-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 VFU_RS07670 918472000aa91e740538482b5f8f1fc8 301 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 46 254 4.8E-45 T 21-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 VFU_RS07670 918472000aa91e740538482b5f8f1fc8 301 Gene3D G3DSA:3.40.1010.10 43 159 1.3E-44 T 21-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 VFU_RS04815 feded08594d1ca1b8bbbcd8212d5542c 168 PANTHER PTHR33695 12 165 2.6E-54 T 21-04-2016 VFU_RS04815 feded08594d1ca1b8bbbcd8212d5542c 168 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 10 167 16.957 T 21-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 VFU_RS04815 feded08594d1ca1b8bbbcd8212d5542c 168 PANTHER PTHR33695:SF1 12 165 2.6E-54 T 21-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 VFU_RS04815 feded08594d1ca1b8bbbcd8212d5542c 168 TIGRFAM TIGR00077 lspA: signal peptidase II 8 165 7.9E-47 T 21-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 VFU_RS04815 feded08594d1ca1b8bbbcd8212d5542c 168 Pfam PF01252 Signal peptidase (SPase) II 19 161 4.0E-36 T 21-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 VFU_RS04815 feded08594d1ca1b8bbbcd8212d5542c 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 58 66 5.8E-18 T 21-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 VFU_RS04815 feded08594d1ca1b8bbbcd8212d5542c 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 106 121 5.8E-18 T 21-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 VFU_RS04815 feded08594d1ca1b8bbbcd8212d5542c 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 142 158 5.8E-18 T 21-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 VFU_RS04815 feded08594d1ca1b8bbbcd8212d5542c 168 ProSitePatterns PS00855 Signal peptidases II signature. 109 121 - T 21-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 VFU_RS03730 2a127f9cc59cac8930b1259e4abbffd6 320 Gene3D G3DSA:3.40.50.720 30 111 7.7E-27 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS03730 2a127f9cc59cac8930b1259e4abbffd6 320 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 289 4.3E-52 T 21-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VFU_RS03730 2a127f9cc59cac8930b1259e4abbffd6 320 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 225 241 - T 21-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VFU_RS03730 2a127f9cc59cac8930b1259e4abbffd6 320 PANTHER PTHR10996 30 320 1.8E-93 T 21-04-2016 VFU_RS03730 2a127f9cc59cac8930b1259e4abbffd6 320 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 36 319 1.4E-23 T 21-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 VFU_RS03730 2a127f9cc59cac8930b1259e4abbffd6 320 Gene3D G3DSA:3.40.50.720 112 290 6.8E-59 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS03730 2a127f9cc59cac8930b1259e4abbffd6 320 SUPERFAMILY SSF51735 103 290 1.54E-52 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS03730 2a127f9cc59cac8930b1259e4abbffd6 320 SUPERFAMILY SSF52283 4 139 2.98E-30 T 21-04-2016 VFU_RS03730 2a127f9cc59cac8930b1259e4abbffd6 320 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 196 218 - T 21-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VFU_RS04510 2cdd6b5d7a86ef0470db9e3058d78fc0 430 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 104.578 T 21-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 VFU_RS04510 2cdd6b5d7a86ef0470db9e3058d78fc0 430 Gene3D G3DSA:3.40.640.10 71 316 7.6E-83 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VFU_RS04510 2cdd6b5d7a86ef0470db9e3058d78fc0 430 PANTHER PTHR11986:SF5 1 430 1.9E-232 T 21-04-2016 VFU_RS04510 2cdd6b5d7a86ef0470db9e3058d78fc0 430 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 424 4.0E-193 T 21-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 VFU_RS04510 2cdd6b5d7a86ef0470db9e3058d78fc0 430 SUPERFAMILY SSF53383 1 423 2.53E-134 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VFU_RS04510 2cdd6b5d7a86ef0470db9e3058d78fc0 430 Gene3D G3DSA:3.90.1150.10 319 424 1.5E-43 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VFU_RS04510 2cdd6b5d7a86ef0470db9e3058d78fc0 430 Gene3D G3DSA:3.90.1150.10 2 69 1.5E-43 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VFU_RS04510 2cdd6b5d7a86ef0470db9e3058d78fc0 430 PANTHER PTHR11986 1 430 1.9E-232 T 21-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VFU_RS04510 2cdd6b5d7a86ef0470db9e3058d78fc0 430 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 21-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VFU_RS04510 2cdd6b5d7a86ef0470db9e3058d78fc0 430 Pfam PF00202 Aminotransferase class-III 33 396 3.0E-75 T 21-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VFU_RS01700 54c73a8d065488b8dd16848de6b09cbf 85 Gene3D G3DSA:2.40.50.220 1 82 3.7E-19 T 21-04-2016 IPR023414 Ethanolamine utilization protein-like domain VFU_RS01700 54c73a8d065488b8dd16848de6b09cbf 85 SUPERFAMILY SSF159133 1 83 3.27E-17 T 21-04-2016 IPR023414 Ethanolamine utilization protein-like domain VFU_RS01700 54c73a8d065488b8dd16848de6b09cbf 85 PANTHER PTHR36539:SF1 1 58 2.1E-15 T 21-04-2016 VFU_RS01700 54c73a8d065488b8dd16848de6b09cbf 85 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 1 78 1.8E-17 T 21-04-2016 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml VFU_RS01700 54c73a8d065488b8dd16848de6b09cbf 85 PANTHER PTHR36539 1 58 2.1E-15 T 21-04-2016 VFU_RS08015 0e15fd741ae634844138756db9780961 247 SUPERFAMILY SSF50630 107 241 1.13E-41 T 21-04-2016 IPR021109 Aspartic peptidase domain VFU_RS08015 0e15fd741ae634844138756db9780961 247 Gene3D G3DSA:2.40.70.10 105 235 4.5E-48 T 21-04-2016 IPR021109 Aspartic peptidase domain VFU_RS08015 0e15fd741ae634844138756db9780961 247 Pfam PF05618 Putative ATP-dependant zinc protease 107 243 7.3E-48 T 21-04-2016 VFU_RS08015 0e15fd741ae634844138756db9780961 247 PANTHER PTHR38037 29 247 2.4E-55 T 21-04-2016 VFU_RS05865 fd9ac666750e4c12bf951fe9af6c2f30 154 Pfam PF11143 Protein of unknown function (DUF2919) 3 146 6.4E-56 T 21-04-2016 IPR021318 Protein of unknown function DUF2919 VFU_RS04275 b1eb6a315daf76299f53a21bbb3d3bf1 562 SUPERFAMILY SSF52540 172 559 2.25E-94 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS04275 b1eb6a315daf76299f53a21bbb3d3bf1 562 Gene3D G3DSA:3.30.450.90 164 288 6.3E-50 T 21-04-2016 VFU_RS04275 b1eb6a315daf76299f53a21bbb3d3bf1 562 PANTHER PTHR30258:SF2 2 559 2.0E-171 T 21-04-2016 VFU_RS04275 b1eb6a315daf76299f53a21bbb3d3bf1 562 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 383 397 - T 21-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VFU_RS04275 b1eb6a315daf76299f53a21bbb3d3bf1 562 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 5 559 3.7E-239 T 21-04-2016 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 VFU_RS04275 b1eb6a315daf76299f53a21bbb3d3bf1 562 SUPERFAMILY SSF160246 1 140 1.91E-32 T 21-04-2016 VFU_RS04275 b1eb6a315daf76299f53a21bbb3d3bf1 562 Pfam PF00437 Type II/IV secretion system protein 188 455 1.9E-85 T 21-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VFU_RS04275 b1eb6a315daf76299f53a21bbb3d3bf1 562 PANTHER PTHR30258 2 559 2.0E-171 T 21-04-2016 VFU_RS04275 b1eb6a315daf76299f53a21bbb3d3bf1 562 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 39 142 1.4E-17 T 21-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 VFU_RS04275 b1eb6a315daf76299f53a21bbb3d3bf1 562 Gene3D G3DSA:3.40.50.300 294 560 1.7E-96 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS08510 3882571c0050484a96fcc69d7b3d96ff 377 SUPERFAMILY SSF47240 3 341 2.69E-112 T 21-04-2016 IPR009078 Ferritin-like superfamily VFU_RS08510 3882571c0050484a96fcc69d7b3d96ff 377 Pfam PF00268 Ribonucleotide reductase, small chain 32 333 1.4E-49 T 21-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 VFU_RS08510 3882571c0050484a96fcc69d7b3d96ff 377 PANTHER PTHR23409 197 377 1.6E-273 T 21-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 VFU_RS08510 3882571c0050484a96fcc69d7b3d96ff 377 PANTHER PTHR23409 1 173 1.6E-273 T 21-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 VFU_RS08510 3882571c0050484a96fcc69d7b3d96ff 377 Gene3D G3DSA:1.10.620.20 3 341 4.7E-125 T 21-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 VFU_RS08510 3882571c0050484a96fcc69d7b3d96ff 377 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 21-04-2016 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 VFU_RS08510 3882571c0050484a96fcc69d7b3d96ff 377 PANTHER PTHR23409:SF23 197 377 1.6E-273 T 21-04-2016 VFU_RS08510 3882571c0050484a96fcc69d7b3d96ff 377 PANTHER PTHR23409:SF23 1 173 1.6E-273 T 21-04-2016 VFU_RS09055 0b9907808cf91363ba015404290a1d38 279 SUPERFAMILY SSF52151 4 233 2.62E-36 T 21-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 VFU_RS09055 0b9907808cf91363ba015404290a1d38 279 Pfam PF01734 Patatin-like phospholipase 7 171 5.5E-13 T 21-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 VFU_RS09055 0b9907808cf91363ba015404290a1d38 279 PANTHER PTHR14226:SF25 5 274 1.2E-56 T 21-04-2016 VFU_RS09055 0b9907808cf91363ba015404290a1d38 279 PANTHER PTHR14226 5 274 1.2E-56 T 21-04-2016 VFU_RS08670 9c23b979455f0fe3abf2dcb35bb13e57 276 Pfam PF00561 alpha/beta hydrolase fold 25 259 2.8E-25 T 21-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VFU_RS08670 9c23b979455f0fe3abf2dcb35bb13e57 276 PRINTS PR00412 Epoxide hydrolase signature 251 273 1.6E-8 T 21-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VFU_RS08670 9c23b979455f0fe3abf2dcb35bb13e57 276 PRINTS PR00412 Epoxide hydrolase signature 30 48 1.6E-8 T 21-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VFU_RS08670 9c23b979455f0fe3abf2dcb35bb13e57 276 PRINTS PR00412 Epoxide hydrolase signature 50 65 1.6E-8 T 21-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VFU_RS08670 9c23b979455f0fe3abf2dcb35bb13e57 276 PRINTS PR00412 Epoxide hydrolase signature 217 233 1.6E-8 T 21-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VFU_RS08670 9c23b979455f0fe3abf2dcb35bb13e57 276 PANTHER PTHR10992:SF859 8 276 1.8E-118 T 21-04-2016 VFU_RS08670 9c23b979455f0fe3abf2dcb35bb13e57 276 SUPERFAMILY SSF53474 5 275 3.67E-67 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold VFU_RS08670 9c23b979455f0fe3abf2dcb35bb13e57 276 Gene3D G3DSA:3.40.50.1820 7 275 1.3E-72 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold VFU_RS08670 9c23b979455f0fe3abf2dcb35bb13e57 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 219 233 1.9E-11 T 21-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VFU_RS08670 9c23b979455f0fe3abf2dcb35bb13e57 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 50 65 1.9E-11 T 21-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VFU_RS08670 9c23b979455f0fe3abf2dcb35bb13e57 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 94 107 1.9E-11 T 21-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VFU_RS08670 9c23b979455f0fe3abf2dcb35bb13e57 276 PANTHER PTHR10992 8 276 1.8E-118 T 21-04-2016 VFU_RS13975 2d59bff008e38fdf205bd42966119a15 406 PANTHER PTHR21110 2 406 4.1E-160 T 21-04-2016 VFU_RS13975 2d59bff008e38fdf205bd42966119a15 406 SUPERFAMILY SSF143856 118 234 5.23E-47 T 21-04-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 VFU_RS13975 2d59bff008e38fdf205bd42966119a15 406 SUPERFAMILY SSF53649 1 115 2.88E-71 T 21-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VFU_RS13975 2d59bff008e38fdf205bd42966119a15 406 SUPERFAMILY SSF53649 236 406 2.88E-71 T 21-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VFU_RS13975 2d59bff008e38fdf205bd42966119a15 406 Pfam PF01676 Metalloenzyme superfamily 2 397 8.4E-44 T 21-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 VFU_RS13975 2d59bff008e38fdf205bd42966119a15 406 Gene3D G3DSA:3.40.720.10 1 114 5.5E-74 T 21-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VFU_RS13975 2d59bff008e38fdf205bd42966119a15 406 Gene3D G3DSA:3.40.720.10 239 406 5.5E-74 T 21-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VFU_RS13975 2d59bff008e38fdf205bd42966119a15 406 Gene3D G3DSA:3.30.70.1250 115 234 2.7E-49 T 21-04-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 VFU_RS13975 2d59bff008e38fdf205bd42966119a15 406 PIRSF PIRSF001491 1 406 2.1E-161 T 21-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 VFU_RS13975 2d59bff008e38fdf205bd42966119a15 406 PANTHER PTHR21110:SF0 2 406 4.1E-160 T 21-04-2016 VFU_RS13975 2d59bff008e38fdf205bd42966119a15 406 Hamap MF_00740 Phosphopentomutase [deoB]. 1 406 54.301 T 21-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 VFU_RS13975 2d59bff008e38fdf205bd42966119a15 406 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 403 1.8E-179 T 21-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 VFU_RS00195 947f68ff655d79f10cc27c4ca73e4817 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 3.81E-9 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VFU_RS00195 947f68ff655d79f10cc27c4ca73e4817 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 3.81E-9 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VFU_RS00195 947f68ff655d79f10cc27c4ca73e4817 211 PANTHER PTHR30055:SF30 1 194 2.2E-61 T 21-04-2016 VFU_RS00195 947f68ff655d79f10cc27c4ca73e4817 211 SUPERFAMILY SSF46689 2 72 4.47E-17 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS00195 947f68ff655d79f10cc27c4ca73e4817 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 53 8.4E-14 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VFU_RS00195 947f68ff655d79f10cc27c4ca73e4817 211 Pfam PF13972 Bacterial transcriptional repressor 57 199 1.5E-41 T 21-04-2016 IPR025722 Bacterial transcriptional repressor TetR VFU_RS00195 947f68ff655d79f10cc27c4ca73e4817 211 PANTHER PTHR30055 1 194 2.2E-61 T 21-04-2016 VFU_RS00195 947f68ff655d79f10cc27c4ca73e4817 211 Gene3D G3DSA:1.10.357.10 2 168 8.2E-28 T 21-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 VFU_RS05535 2f004748315d3b5ac37ee732124b4a10 434 PANTHER PTHR30435:SF1 312 434 2.3E-89 T 21-04-2016 VFU_RS05535 2f004748315d3b5ac37ee732124b4a10 434 PANTHER PTHR30435:SF1 1 126 2.3E-89 T 21-04-2016 VFU_RS05535 2f004748315d3b5ac37ee732124b4a10 434 Pfam PF07559 Flagellar basal body protein FlaE 181 314 7.8E-21 T 21-04-2016 IPR011491 Flagellar hook protein FlgE VFU_RS05535 2f004748315d3b5ac37ee732124b4a10 434 SUPERFAMILY SSF117143 78 395 1.44E-69 T 21-04-2016 VFU_RS05535 2f004748315d3b5ac37ee732124b4a10 434 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 2 416 9.8E-94 T 21-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G VFU_RS05535 2f004748315d3b5ac37ee732124b4a10 434 PANTHER PTHR30435 312 434 2.3E-89 T 21-04-2016 VFU_RS05535 2f004748315d3b5ac37ee732124b4a10 434 PANTHER PTHR30435 1 126 2.3E-89 T 21-04-2016 VFU_RS05535 2f004748315d3b5ac37ee732124b4a10 434 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 355 433 1.5E-15 T 21-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VFU_RS05535 2f004748315d3b5ac37ee732124b4a10 434 Pfam PF00460 Flagella basal body rod protein 3 32 7.2E-10 T 21-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VFU_RS05535 2f004748315d3b5ac37ee732124b4a10 434 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 8 28 - T 21-04-2016 IPR019776 Flagellar basal body rod protein, conserved site VFU_RS00465 cee491be9dc0fdeb2222e8eec91ac3db 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 1.2E-11 T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VFU_RS00465 cee491be9dc0fdeb2222e8eec91ac3db 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 1.2E-11 T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VFU_RS00465 cee491be9dc0fdeb2222e8eec91ac3db 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 1.2E-11 T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VFU_RS00465 cee491be9dc0fdeb2222e8eec91ac3db 134 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 132 2.3E-64 T 21-04-2016 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 VFU_RS00465 cee491be9dc0fdeb2222e8eec91ac3db 134 SUPERFAMILY SSF46955 2 121 3.3E-33 T 21-04-2016 IPR009061 Putative DNA-binding domain VFU_RS00465 cee491be9dc0fdeb2222e8eec91ac3db 134 SMART SM00422 2 71 2.2E-29 T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VFU_RS00465 cee491be9dc0fdeb2222e8eec91ac3db 134 Gene3D G3DSA:1.10.1660.10 58 133 2.3E-24 T 21-04-2016 VFU_RS00465 cee491be9dc0fdeb2222e8eec91ac3db 134 PANTHER PTHR30204:SF18 1 132 2.3E-53 T 21-04-2016 VFU_RS00465 cee491be9dc0fdeb2222e8eec91ac3db 134 PANTHER PTHR30204 1 132 2.3E-53 T 21-04-2016 VFU_RS00465 cee491be9dc0fdeb2222e8eec91ac3db 134 Gene3D G3DSA:1.10.1660.10 1 57 1.8E-27 T 21-04-2016 VFU_RS00465 cee491be9dc0fdeb2222e8eec91ac3db 134 Pfam PF13411 MerR HTH family regulatory protein 3 69 6.0E-17 T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VFU_RS14265 bc2d75e748ae14ff821053fa77f84cb2 105 Hamap MF_00910 Cell division protein FtsL [ftsL]. 19 102 15.843 T 21-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 VFU_RS14265 bc2d75e748ae14ff821053fa77f84cb2 105 Pfam PF04999 Cell division protein FtsL 8 103 4.9E-35 T 21-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 VFU_RS14265 bc2d75e748ae14ff821053fa77f84cb2 105 PANTHER PTHR37479 1 105 6.6E-36 T 21-04-2016 VFU_RS14265 bc2d75e748ae14ff821053fa77f84cb2 105 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 20 102 5.8E-26 T 21-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 VFU_RS14265 bc2d75e748ae14ff821053fa77f84cb2 105 PANTHER PTHR37479:SF1 1 105 6.6E-36 T 21-04-2016 VFU_RS13070 140cd1d44f313dcd0bef63f5f2e62088 321 Gene3D G3DSA:3.30.1330.60 173 301 1.4E-30 T 21-04-2016 IPR006665 OmpA-like domain VFU_RS13070 140cd1d44f313dcd0bef63f5f2e62088 321 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 6 57 6.2E-18 T 21-04-2016 IPR025713 Motility protein B, N-terminal domain VFU_RS13070 140cd1d44f313dcd0bef63f5f2e62088 321 SUPERFAMILY SSF103088 184 301 3.27E-29 T 21-04-2016 IPR006665 OmpA-like domain VFU_RS13070 140cd1d44f313dcd0bef63f5f2e62088 321 PANTHER PTHR30329 2 70 5.3E-108 T 21-04-2016 VFU_RS13070 140cd1d44f313dcd0bef63f5f2e62088 321 Pfam PF00691 OmpA family 197 295 1.6E-17 T 21-04-2016 IPR006665 OmpA-like domain VFU_RS13070 140cd1d44f313dcd0bef63f5f2e62088 321 PANTHER PTHR30329 105 320 5.3E-108 T 21-04-2016 VFU_RS13070 140cd1d44f313dcd0bef63f5f2e62088 321 PANTHER PTHR30329:SF4 105 320 5.3E-108 T 21-04-2016 VFU_RS13070 140cd1d44f313dcd0bef63f5f2e62088 321 PANTHER PTHR30329:SF4 2 70 5.3E-108 T 21-04-2016 VFU_RS09600 fd8f04cf6e7ed15dfb6f3f67899a0b8d 294 Pfam PF03466 LysR substrate binding domain 91 289 3.9E-38 T 21-04-2016 IPR005119 LysR, substrate-binding VFU_RS09600 fd8f04cf6e7ed15dfb6f3f67899a0b8d 294 Gene3D G3DSA:3.40.190.10 91 173 1.0E-23 T 21-04-2016 VFU_RS09600 fd8f04cf6e7ed15dfb6f3f67899a0b8d 294 SUPERFAMILY SSF53850 91 291 1.37E-34 T 21-04-2016 VFU_RS09600 fd8f04cf6e7ed15dfb6f3f67899a0b8d 294 PANTHER PTHR30346:SF0 1 294 2.5E-101 T 21-04-2016 VFU_RS09600 fd8f04cf6e7ed15dfb6f3f67899a0b8d 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.7E-9 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS09600 fd8f04cf6e7ed15dfb6f3f67899a0b8d 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.7E-9 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS09600 fd8f04cf6e7ed15dfb6f3f67899a0b8d 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.7E-9 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS09600 fd8f04cf6e7ed15dfb6f3f67899a0b8d 294 Gene3D G3DSA:3.40.190.10 174 264 7.3E-20 T 21-04-2016 VFU_RS09600 fd8f04cf6e7ed15dfb6f3f67899a0b8d 294 SUPERFAMILY SSF46785 1 81 1.89E-24 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS09600 fd8f04cf6e7ed15dfb6f3f67899a0b8d 294 Gene3D G3DSA:1.10.10.10 1 84 1.9E-30 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS09600 fd8f04cf6e7ed15dfb6f3f67899a0b8d 294 PANTHER PTHR30346 1 294 2.5E-101 T 21-04-2016 VFU_RS09600 fd8f04cf6e7ed15dfb6f3f67899a0b8d 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 9.6E-24 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS10365 fb1a220444425dd568cc94bc8edd5586 295 PANTHER PTHR11644 18 288 7.2E-128 T 21-04-2016 VFU_RS10365 fb1a220444425dd568cc94bc8edd5586 295 PIRSF PIRSF006334 14 295 4.6E-107 T 21-04-2016 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 VFU_RS10365 fb1a220444425dd568cc94bc8edd5586 295 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 29 295 2.1E-98 T 21-04-2016 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 VFU_RS10365 fb1a220444425dd568cc94bc8edd5586 295 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 277 3.4E-41 T 21-04-2016 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 VFU_RS10365 fb1a220444425dd568cc94bc8edd5586 295 Gene3D G3DSA:3.40.140.10 184 289 6.0E-22 T 21-04-2016 VFU_RS10365 fb1a220444425dd568cc94bc8edd5586 295 Hamap MF_01558 Cytidine deaminase [cdd]. 1 293 48.677 T 21-04-2016 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 VFU_RS10365 fb1a220444425dd568cc94bc8edd5586 295 Gene3D G3DSA:3.40.140.10 35 177 8.2E-43 T 21-04-2016 VFU_RS10365 fb1a220444425dd568cc94bc8edd5586 295 SUPERFAMILY SSF53927 152 284 7.15E-34 T 21-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 VFU_RS10365 fb1a220444425dd568cc94bc8edd5586 295 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 21-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VFU_RS10365 fb1a220444425dd568cc94bc8edd5586 295 PANTHER PTHR11644:SF15 18 288 7.2E-128 T 21-04-2016 VFU_RS10365 fb1a220444425dd568cc94bc8edd5586 295 SUPERFAMILY SSF53927 1 147 2.84E-41 T 21-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 VFU_RS10365 fb1a220444425dd568cc94bc8edd5586 295 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 57 144 1.9E-13 T 21-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 VFU_RS04235 8aa3cea6b35192c7c014365c398e7540 195 Gene3D G3DSA:3.40.50.1820 134 189 8.1E-19 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold VFU_RS04235 8aa3cea6b35192c7c014365c398e7540 195 Gene3D G3DSA:3.40.50.1820 7 102 8.1E-19 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold VFU_RS04235 8aa3cea6b35192c7c014365c398e7540 195 Pfam PF05728 Uncharacterised protein family (UPF0227) 8 193 3.7E-72 T 21-04-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA VFU_RS04235 8aa3cea6b35192c7c014365c398e7540 195 PANTHER PTHR35602:SF3 2 195 7.3E-112 T 21-04-2016 VFU_RS04235 8aa3cea6b35192c7c014365c398e7540 195 SUPERFAMILY SSF53474 7 194 1.97E-18 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold VFU_RS04235 8aa3cea6b35192c7c014365c398e7540 195 PANTHER PTHR35602 2 195 7.3E-112 T 21-04-2016 VFU_RS08775 50544cab21be0ca3134de94a706c5380 444 SMART SM00387 328 439 4.8E-21 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS08775 50544cab21be0ca3134de94a706c5380 444 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 334 438 4.3E-15 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS08775 50544cab21be0ca3134de94a706c5380 444 SUPERFAMILY SSF55874 292 438 1.13E-28 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS08775 50544cab21be0ca3134de94a706c5380 444 Pfam PF00027 Cyclic nucleotide-binding domain 21 99 2.0E-8 T 21-04-2016 IPR000595 Cyclic nucleotide-binding domain VFU_RS08775 50544cab21be0ca3134de94a706c5380 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 418 2.1E-10 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS08775 50544cab21be0ca3134de94a706c5380 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 395 2.1E-10 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS08775 50544cab21be0ca3134de94a706c5380 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 381 2.1E-10 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS08775 50544cab21be0ca3134de94a706c5380 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 436 2.1E-10 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VFU_RS08775 50544cab21be0ca3134de94a706c5380 444 Gene3D G3DSA:3.30.565.10 292 439 5.2E-30 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS08775 50544cab21be0ca3134de94a706c5380 444 SUPERFAMILY SSF51206 18 131 3.93E-13 T 21-04-2016 IPR018490 Cyclic nucleotide-binding-like VFU_RS08775 50544cab21be0ca3134de94a706c5380 444 Gene3D G3DSA:2.60.120.10 21 99 1.0E-8 T 21-04-2016 IPR014710 RmlC-like jelly roll fold VFU_RS08775 50544cab21be0ca3134de94a706c5380 444 PANTHER PTHR24423:SF445 125 194 1.0E-42 T 21-04-2016 VFU_RS08775 50544cab21be0ca3134de94a706c5380 444 PANTHER PTHR24423:SF445 264 444 1.0E-42 T 21-04-2016 VFU_RS08775 50544cab21be0ca3134de94a706c5380 444 PANTHER PTHR24423 125 194 1.0E-42 T 21-04-2016 VFU_RS08775 50544cab21be0ca3134de94a706c5380 444 PANTHER PTHR24423 264 444 1.0E-42 T 21-04-2016 VFU_RS07395 00516bea6bd6eba163f52502b01f8ccb 511 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 22 498 4.0E-128 T 21-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 VFU_RS07395 00516bea6bd6eba163f52502b01f8ccb 511 Pfam PF07690 Major Facilitator Superfamily 24 417 2.4E-52 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VFU_RS07395 00516bea6bd6eba163f52502b01f8ccb 511 Gene3D G3DSA:1.20.1250.20 480 503 8.5E-16 T 21-04-2016 VFU_RS07395 00516bea6bd6eba163f52502b01f8ccb 511 Gene3D G3DSA:1.20.1250.20 271 431 8.5E-16 T 21-04-2016 VFU_RS07395 00516bea6bd6eba163f52502b01f8ccb 511 PANTHER PTHR23501 3 502 7.8E-261 T 21-04-2016 VFU_RS07395 00516bea6bd6eba163f52502b01f8ccb 511 Gene3D G3DSA:1.20.1250.20 22 206 3.2E-29 T 21-04-2016 VFU_RS07395 00516bea6bd6eba163f52502b01f8ccb 511 PANTHER PTHR23501:SF52 3 502 7.8E-261 T 21-04-2016 VFU_RS07395 00516bea6bd6eba163f52502b01f8ccb 511 SUPERFAMILY SSF103473 8 213 1.1E-62 T 21-04-2016 IPR020846 Major facilitator superfamily domain VFU_RS07395 00516bea6bd6eba163f52502b01f8ccb 511 SUPERFAMILY SSF103473 475 502 1.1E-62 T 21-04-2016 IPR020846 Major facilitator superfamily domain VFU_RS07395 00516bea6bd6eba163f52502b01f8ccb 511 SUPERFAMILY SSF103473 256 427 1.1E-62 T 21-04-2016 IPR020846 Major facilitator superfamily domain VFU_RS00690 a17826c5bcd6682dccdd0c2eec1159aa 336 Gene3D G3DSA:3.40.50.720 1 197 1.9E-61 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS00690 a17826c5bcd6682dccdd0c2eec1159aa 336 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 322 5.8E-60 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS00690 a17826c5bcd6682dccdd0c2eec1159aa 336 PANTHER PTHR10366:SF77 2 332 1.1E-180 T 21-04-2016 VFU_RS00690 a17826c5bcd6682dccdd0c2eec1159aa 336 Gene3D G3DSA:3.90.25.10 259 329 2.8E-21 T 21-04-2016 VFU_RS00690 a17826c5bcd6682dccdd0c2eec1159aa 336 Gene3D G3DSA:3.90.25.10 198 217 2.8E-21 T 21-04-2016 VFU_RS00690 a17826c5bcd6682dccdd0c2eec1159aa 336 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 3.0E-32 T 21-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 VFU_RS00690 a17826c5bcd6682dccdd0c2eec1159aa 336 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 3.0E-32 T 21-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 VFU_RS00690 a17826c5bcd6682dccdd0c2eec1159aa 336 PRINTS PR01713 Nucleotide sugar epimerase signature 215 230 3.0E-32 T 21-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 VFU_RS00690 a17826c5bcd6682dccdd0c2eec1159aa 336 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 3.0E-32 T 21-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 VFU_RS00690 a17826c5bcd6682dccdd0c2eec1159aa 336 PANTHER PTHR10366 2 332 1.1E-180 T 21-04-2016 VFU_RS00690 a17826c5bcd6682dccdd0c2eec1159aa 336 SUPERFAMILY SSF51735 1 330 4.54E-92 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS07080 b7898b8ffed6b67e0b018857cc1d4214 286 PANTHER PTHR11614:SF82 1 277 5.8E-77 T 21-04-2016 VFU_RS07080 b7898b8ffed6b67e0b018857cc1d4214 286 PANTHER PTHR11614 1 277 5.8E-77 T 21-04-2016 VFU_RS07080 b7898b8ffed6b67e0b018857cc1d4214 286 Pfam PF12146 Serine aminopeptidase, S33 40 150 1.7E-9 T 21-04-2016 IPR022742 Serine aminopeptidase, S33 VFU_RS07080 b7898b8ffed6b67e0b018857cc1d4214 286 PIRSF PIRSF037442 1 283 7.4E-83 T 21-04-2016 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 VFU_RS07080 b7898b8ffed6b67e0b018857cc1d4214 286 SUPERFAMILY SSF53474 8 279 7.3E-22 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold VFU_RS07080 b7898b8ffed6b67e0b018857cc1d4214 286 Gene3D G3DSA:3.40.50.1820 4 279 1.5E-21 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold VFU_RS14045 93b8705ecf38befd877cd0adb4fbde92 318 Pfam PF08544 GHMP kinases C terminal 218 292 1.9E-9 T 21-04-2016 IPR013750 GHMP kinase, C-terminal domain VFU_RS14045 93b8705ecf38befd877cd0adb4fbde92 318 SUPERFAMILY SSF55060 178 294 3.96E-32 T 21-04-2016 IPR013750 GHMP kinase, C-terminal domain VFU_RS14045 93b8705ecf38befd877cd0adb4fbde92 318 PANTHER PTHR20861:SF1 1 317 2.4E-121 T 21-04-2016 VFU_RS14045 93b8705ecf38befd877cd0adb4fbde92 318 SUPERFAMILY SSF54211 3 191 2.2E-33 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VFU_RS14045 93b8705ecf38befd877cd0adb4fbde92 318 PRINTS PR00958 Homoserine kinase signature 181 198 9.3E-31 T 21-04-2016 VFU_RS14045 93b8705ecf38befd877cd0adb4fbde92 318 PRINTS PR00958 Homoserine kinase signature 143 156 9.3E-31 T 21-04-2016 VFU_RS14045 93b8705ecf38befd877cd0adb4fbde92 318 PRINTS PR00958 Homoserine kinase signature 10 25 9.3E-31 T 21-04-2016 VFU_RS14045 93b8705ecf38befd877cd0adb4fbde92 318 PRINTS PR00958 Homoserine kinase signature 103 118 9.3E-31 T 21-04-2016 VFU_RS14045 93b8705ecf38befd877cd0adb4fbde92 318 PRINTS PR00958 Homoserine kinase signature 260 275 9.3E-31 T 21-04-2016 VFU_RS14045 93b8705ecf38befd877cd0adb4fbde92 318 PANTHER PTHR20861 1 317 2.4E-121 T 21-04-2016 VFU_RS14045 93b8705ecf38befd877cd0adb4fbde92 318 Pfam PF00288 GHMP kinases N terminal domain 90 156 1.6E-13 T 21-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 VFU_RS14045 93b8705ecf38befd877cd0adb4fbde92 318 TIGRFAM TIGR00191 thrB: homoserine kinase 3 314 4.0E-107 T 21-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 VFU_RS14045 93b8705ecf38befd877cd0adb4fbde92 318 Gene3D G3DSA:3.30.70.890 174 304 2.6E-40 T 21-04-2016 IPR013750 GHMP kinase, C-terminal domain VFU_RS14045 93b8705ecf38befd877cd0adb4fbde92 318 Hamap MF_00384 Homoserine kinase [thrB]. 3 313 29.725 T 21-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 VFU_RS14045 93b8705ecf38befd877cd0adb4fbde92 318 Gene3D G3DSA:3.30.230.10 2 165 9.7E-45 T 21-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VFU_RS14045 93b8705ecf38befd877cd0adb4fbde92 318 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 96 107 - T 21-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 VFU_RS14045 93b8705ecf38befd877cd0adb4fbde92 318 PIRSF PIRSF000676 1 316 3.6E-79 T 21-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 VFU_RS01560 ff509ada21998a74a2ec12c330efc388 497 PANTHER PTHR10799 365 487 3.5E-16 T 21-04-2016 VFU_RS01560 ff509ada21998a74a2ec12c330efc388 497 Pfam PF00990 Diguanylate cyclase, GGDEF domain 337 482 9.4E-32 T 21-04-2016 IPR000160 GGDEF domain VFU_RS01560 ff509ada21998a74a2ec12c330efc388 497 Pfam PF02743 Cache domain 50 255 1.1E-13 T 21-04-2016 IPR033479 Double Cache domain 1 VFU_RS01560 ff509ada21998a74a2ec12c330efc388 497 Gene3D G3DSA:3.30.450.20 88 184 9.3E-5 T 21-04-2016 VFU_RS01560 ff509ada21998a74a2ec12c330efc388 497 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 333 484 1.0E-33 T 21-04-2016 IPR000160 GGDEF domain VFU_RS01560 ff509ada21998a74a2ec12c330efc388 497 SMART SM00267 325 486 1.9E-43 T 21-04-2016 IPR000160 GGDEF domain VFU_RS01560 ff509ada21998a74a2ec12c330efc388 497 Gene3D G3DSA:3.30.70.270 338 484 1.2E-39 T 21-04-2016 VFU_RS01560 ff509ada21998a74a2ec12c330efc388 497 SUPERFAMILY SSF55073 341 484 2.59E-35 T 21-04-2016 IPR029787 Nucleotide cyclase VFU_RS04440 00a71d4de0072fb56708cbc5fdb50c6c 343 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS04440 00a71d4de0072fb56708cbc5fdb50c6c 343 SUPERFAMILY SSF50331 259 342 4.68E-8 T 21-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal VFU_RS04440 00a71d4de0072fb56708cbc5fdb50c6c 343 Gene3D G3DSA:3.40.50.300 4 236 3.2E-74 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS04440 00a71d4de0072fb56708cbc5fdb50c6c 343 Pfam PF08402 TOBE domain 276 342 1.9E-6 T 21-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 VFU_RS04440 00a71d4de0072fb56708cbc5fdb50c6c 343 SUPERFAMILY SSF52540 5 243 1.36E-80 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS04440 00a71d4de0072fb56708cbc5fdb50c6c 343 SMART SM00382 29 214 2.7E-17 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS04440 00a71d4de0072fb56708cbc5fdb50c6c 343 PANTHER PTHR24220 6 301 4.0E-128 T 21-04-2016 VFU_RS04440 00a71d4de0072fb56708cbc5fdb50c6c 343 PANTHER PTHR24220:SF282 6 301 4.0E-128 T 21-04-2016 VFU_RS04440 00a71d4de0072fb56708cbc5fdb50c6c 343 Pfam PF00005 ABC transporter 20 164 1.3E-34 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS04840 c6b0cbd6411137f27de8512da2bb51a3 603 PANTHER PTHR32507 1 595 2.8E-251 T 21-04-2016 VFU_RS04840 c6b0cbd6411137f27de8512da2bb51a3 603 SUPERFAMILY SSF51735 399 493 1.63E-6 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS04840 c6b0cbd6411137f27de8512da2bb51a3 603 Pfam PF02254 TrkA-N domain 399 490 1.5E-5 T 21-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VFU_RS04840 c6b0cbd6411137f27de8512da2bb51a3 603 Pfam PF00999 Sodium/hydrogen exchanger family 15 386 2.5E-32 T 21-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VFU_RS04840 c6b0cbd6411137f27de8512da2bb51a3 603 PANTHER PTHR32507:SF0 1 595 2.8E-251 T 21-04-2016 VFU_RS04840 c6b0cbd6411137f27de8512da2bb51a3 603 Gene3D G3DSA:3.40.50.720 399 494 1.7E-6 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS07960 5eb650c393ca2c22d35ee43f43455901 196 Gene3D G3DSA:1.10.150.20 114 195 7.0E-32 T 21-04-2016 VFU_RS07960 5eb650c393ca2c22d35ee43f43455901 196 PANTHER PTHR36121:SF1 1 195 3.5E-53 T 21-04-2016 VFU_RS07960 5eb650c393ca2c22d35ee43f43455901 196 PIRSF PIRSF028788 1 196 2.5E-47 T 21-04-2016 IPR026256 Transcriptional regulator, TfoX/Sxy-type VFU_RS07960 5eb650c393ca2c22d35ee43f43455901 196 SUPERFAMILY SSF159894 5 103 4.71E-30 T 21-04-2016 VFU_RS07960 5eb650c393ca2c22d35ee43f43455901 196 Gene3D G3DSA:3.30.1460.30 3 104 3.4E-35 T 21-04-2016 IPR007076 TfoX, N-terminal VFU_RS07960 5eb650c393ca2c22d35ee43f43455901 196 Pfam PF04994 TfoX C-terminal domain 115 194 2.9E-32 T 21-04-2016 IPR007077 TfoX, C-terminal VFU_RS07960 5eb650c393ca2c22d35ee43f43455901 196 Pfam PF04993 TfoX N-terminal domain 12 101 2.2E-29 T 21-04-2016 IPR007076 TfoX, N-terminal VFU_RS07960 5eb650c393ca2c22d35ee43f43455901 196 PANTHER PTHR36121 1 195 3.5E-53 T 21-04-2016 VFU_RS04045 a9652c68554c410863c1f89c61d48561 68 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 63 2.0E-28 T 21-04-2016 IPR009491 Protein of unknown function DUF1107 VFU_RS04045 a9652c68554c410863c1f89c61d48561 68 Gene3D G3DSA:3.30.1910.10 1 65 4.2E-31 T 21-04-2016 VFU_RS04045 a9652c68554c410863c1f89c61d48561 68 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 3.7E-29 T 21-04-2016 IPR009491 Protein of unknown function DUF1107 VFU_RS11555 4742ffddb66e22e42fda51a2a87c118f 251 Pfam PF06629 MltA-interacting protein MipA 30 251 2.9E-45 T 21-04-2016 IPR010583 MltA-interacting MipA VFU_RS11555 4742ffddb66e22e42fda51a2a87c118f 251 PANTHER PTHR38776 5 251 7.8E-45 T 21-04-2016 VFU_RS07975 1388d88f5b079878d40eeaa817947a70 235 PANTHER PTHR26402 3 235 4.5E-101 T 21-04-2016 VFU_RS07975 1388d88f5b079878d40eeaa817947a70 235 SUPERFAMILY SSF52172 2 121 4.7E-36 T 21-04-2016 IPR011006 CheY-like superfamily VFU_RS07975 1388d88f5b079878d40eeaa817947a70 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 232 3.3E-20 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VFU_RS07975 1388d88f5b079878d40eeaa817947a70 235 Gene3D G3DSA:3.40.50.2300 3 118 2.5E-35 T 21-04-2016 VFU_RS07975 1388d88f5b079878d40eeaa817947a70 235 Pfam PF00072 Response regulator receiver domain 5 113 7.5E-27 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS07975 1388d88f5b079878d40eeaa817947a70 235 SUPERFAMILY SSF46894 132 233 3.4E-26 T 21-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VFU_RS07975 1388d88f5b079878d40eeaa817947a70 235 Gene3D G3DSA:1.10.10.10 133 233 1.1E-27 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS07975 1388d88f5b079878d40eeaa817947a70 235 PANTHER PTHR26402:SF596 3 235 4.5E-101 T 21-04-2016 VFU_RS07975 1388d88f5b079878d40eeaa817947a70 235 SMART SM00448 3 113 1.5E-36 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS07975 1388d88f5b079878d40eeaa817947a70 235 SMART SM00862 156 232 1.7E-18 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VFU_RS12815 ce84337dbddc2428b34574f46abe5267 370 Pfam PF02562 PhoH-like protein 120 323 1.4E-94 T 21-04-2016 IPR003714 PhoH-like protein GO:0005524 VFU_RS12815 ce84337dbddc2428b34574f46abe5267 370 Gene3D G3DSA:3.40.50.300 120 323 1.3E-87 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS12815 ce84337dbddc2428b34574f46abe5267 370 SUPERFAMILY SSF52540 119 321 4.25E-40 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS12815 ce84337dbddc2428b34574f46abe5267 370 PANTHER PTHR30473:SF1 2 346 1.3E-205 T 21-04-2016 VFU_RS12815 ce84337dbddc2428b34574f46abe5267 370 PANTHER PTHR30473 2 346 1.3E-205 T 21-04-2016 VFU_RS13430 2fe702f247a4deab9621e0040a4cec20 74 SUPERFAMILY SSF46955 7 58 6.59E-8 T 21-04-2016 IPR009061 Putative DNA-binding domain VFU_RS13430 2fe702f247a4deab9621e0040a4cec20 74 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 7 55 1.2E-16 T 21-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) VFU_RS13430 2fe702f247a4deab9621e0040a4cec20 74 Gene3D G3DSA:1.10.10.10 7 60 3.1E-5 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS02330 29272d66d245c689fe3645cbbcb4a502 209 Pfam PF07947 YhhN-like protein 27 205 1.2E-31 T 21-04-2016 IPR012506 YhhN-like GO:0016021 VFU_RS00900 d5e920270acdfa0a845c61c9003a773c 157 PANTHER PTHR30471 11 157 8.8E-73 T 21-04-2016 VFU_RS00900 d5e920270acdfa0a845c61c9003a773c 157 SUPERFAMILY SSF102712 52 126 3.01E-6 T 21-04-2016 VFU_RS00900 d5e920270acdfa0a845c61c9003a773c 157 Gene3D G3DSA:3.40.140.10 35 157 6.1E-48 T 21-04-2016 VFU_RS00900 d5e920270acdfa0a845c61c9003a773c 157 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 107 112 - T 21-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site VFU_RS00900 d5e920270acdfa0a845c61c9003a773c 157 TIGRFAM TIGR00608 radc: DNA repair protein RadC 23 157 4.5E-43 T 21-04-2016 IPR001405 RadC protein VFU_RS00900 d5e920270acdfa0a845c61c9003a773c 157 Pfam PF04002 RadC-like JAB domain 38 155 4.6E-43 T 21-04-2016 IPR025657 RadC-like JAB domain VFU_RS00900 d5e920270acdfa0a845c61c9003a773c 157 PANTHER PTHR30471:SF5 11 157 8.8E-73 T 21-04-2016 VFU_RS07720 b7a690454a9a67490f72f1ae839c45d1 384 Pfam PF00155 Aminotransferase class I and II 42 374 7.4E-50 T 21-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VFU_RS07720 b7a690454a9a67490f72f1ae839c45d1 384 PANTHER PTHR13693 4 380 3.4E-157 T 21-04-2016 VFU_RS07720 b7a690454a9a67490f72f1ae839c45d1 384 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 231 240 - T 21-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 VFU_RS07720 b7a690454a9a67490f72f1ae839c45d1 384 Gene3D G3DSA:3.90.1150.10 268 378 4.9E-22 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VFU_RS07720 b7a690454a9a67490f72f1ae839c45d1 384 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 21 376 1.4E-131 T 21-04-2016 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 VFU_RS07720 b7a690454a9a67490f72f1ae839c45d1 384 Gene3D G3DSA:3.40.640.10 60 267 5.6E-75 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VFU_RS07720 b7a690454a9a67490f72f1ae839c45d1 384 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 4 379 44.826 T 21-04-2016 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 VFU_RS07720 b7a690454a9a67490f72f1ae839c45d1 384 SUPERFAMILY SSF53383 5 378 6.19E-95 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VFU_RS07720 b7a690454a9a67490f72f1ae839c45d1 384 PANTHER PTHR13693:SF53 4 380 3.4E-157 T 21-04-2016 VFU_RS00030 f03871dc1bb97b74d684814cd5b9631c 130 PANTHER PTHR34874:SF1 3 130 1.1E-54 T 21-04-2016 VFU_RS00030 f03871dc1bb97b74d684814cd5b9631c 130 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 4 130 3.8E-54 T 21-04-2016 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 VFU_RS00030 f03871dc1bb97b74d684814cd5b9631c 130 SUPERFAMILY SSF75169 5 130 4.32E-35 T 21-04-2016 IPR027396 DsrEFH-like VFU_RS00030 f03871dc1bb97b74d684814cd5b9631c 130 Gene3D G3DSA:3.40.1260.10 5 130 3.7E-29 T 21-04-2016 IPR027396 DsrEFH-like VFU_RS00030 f03871dc1bb97b74d684814cd5b9631c 130 Pfam PF02635 DsrE/DsrF-like family 5 130 1.4E-26 T 21-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein VFU_RS00030 f03871dc1bb97b74d684814cd5b9631c 130 PANTHER PTHR34874 3 130 1.1E-54 T 21-04-2016 VFU_RS09995 b2caf2760b42ffa18e6e60b3dbb2d457 281 Hamap MF_00187 Protein FdhD [fdhD]. 11 271 35.663 T 21-04-2016 IPR003786 Protein FdhD GO:0016783 VFU_RS09995 b2caf2760b42ffa18e6e60b3dbb2d457 281 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 31 271 3.1E-71 T 21-04-2016 IPR003786 Protein FdhD GO:0016783 VFU_RS09995 b2caf2760b42ffa18e6e60b3dbb2d457 281 Gene3D G3DSA:3.40.140.10 136 275 1.0E-47 T 21-04-2016 VFU_RS09995 b2caf2760b42ffa18e6e60b3dbb2d457 281 SUPERFAMILY SSF53927 16 270 3.31E-76 T 21-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 VFU_RS09995 b2caf2760b42ffa18e6e60b3dbb2d457 281 Gene3D G3DSA:3.10.20.10 37 123 1.8E-28 T 21-04-2016 VFU_RS09995 b2caf2760b42ffa18e6e60b3dbb2d457 281 PANTHER PTHR30592 7 281 4.7E-101 T 21-04-2016 VFU_RS09995 b2caf2760b42ffa18e6e60b3dbb2d457 281 PANTHER PTHR30592:SF1 7 281 4.7E-101 T 21-04-2016 VFU_RS09995 b2caf2760b42ffa18e6e60b3dbb2d457 281 PIRSF PIRSF015626 3 275 2.2E-77 T 21-04-2016 IPR003786 Protein FdhD GO:0016783 VFU_RS09995 b2caf2760b42ffa18e6e60b3dbb2d457 281 Pfam PF02634 FdhD/NarQ family 35 270 2.5E-71 T 21-04-2016 IPR003786 Protein FdhD GO:0016783 VFU_RS10265 ac81cd23045ea9cb186cb9220c2268af 251 Pfam PF00005 ABC transporter 15 164 1.1E-21 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS10265 ac81cd23045ea9cb186cb9220c2268af 251 SMART SM00382 22 219 3.9E-10 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS10265 ac81cd23045ea9cb186cb9220c2268af 251 Gene3D G3DSA:3.40.50.300 16 233 8.9E-47 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS10265 ac81cd23045ea9cb186cb9220c2268af 251 PANTHER PTHR24220 1 234 1.5E-96 T 21-04-2016 VFU_RS10265 ac81cd23045ea9cb186cb9220c2268af 251 SUPERFAMILY SSF52540 16 229 5.33E-45 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS10265 ac81cd23045ea9cb186cb9220c2268af 251 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 2 251 46.367 T 21-04-2016 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 VFU_RS10265 ac81cd23045ea9cb186cb9220c2268af 251 PANTHER PTHR24220:SF547 1 234 1.5E-96 T 21-04-2016 VFU_RS12615 115694ea13e13f9e6856909108766e71 308 Gene3D G3DSA:3.90.226.10 19 280 2.2E-70 T 21-04-2016 IPR029045 ClpP/crotonase-like domain VFU_RS12615 115694ea13e13f9e6856909108766e71 308 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 284 2.3E-137 T 21-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VFU_RS12615 115694ea13e13f9e6856909108766e71 308 SUPERFAMILY SSF52096 25 280 3.73E-82 T 21-04-2016 IPR029045 ClpP/crotonase-like domain VFU_RS12615 115694ea13e13f9e6856909108766e71 308 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 37.054 T 21-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VFU_RS12615 115694ea13e13f9e6856909108766e71 308 PANTHER PTHR22855 1 304 3.9E-177 T 21-04-2016 VFU_RS12615 115694ea13e13f9e6856909108766e71 308 PANTHER PTHR22855:SF17 1 304 3.9E-177 T 21-04-2016 VFU_RS12615 115694ea13e13f9e6856909108766e71 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 1.6E-38 T 21-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VFU_RS12615 115694ea13e13f9e6856909108766e71 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 1.6E-38 T 21-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VFU_RS12615 115694ea13e13f9e6856909108766e71 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 1.6E-38 T 21-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VFU_RS12615 115694ea13e13f9e6856909108766e71 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 1.6E-38 T 21-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VFU_RS12615 115694ea13e13f9e6856909108766e71 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 1.6E-38 T 21-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VFU_RS12615 115694ea13e13f9e6856909108766e71 308 Pfam PF01039 Carboxyl transferase domain 99 241 1.8E-11 T 21-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VFU_RS01460 b7cc4da3d8e853676c334cd179cbc147 426 Gene3D G3DSA:3.40.50.150 229 424 1.1E-58 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS01460 b7cc4da3d8e853676c334cd179cbc147 426 Gene3D G3DSA:1.10.287.730 145 169 5.8E-15 T 21-04-2016 VFU_RS01460 b7cc4da3d8e853676c334cd179cbc147 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 314 326 6.3E-31 T 21-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VFU_RS01460 b7cc4da3d8e853676c334cd179cbc147 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 219 233 6.3E-31 T 21-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VFU_RS01460 b7cc4da3d8e853676c334cd179cbc147 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 364 380 6.3E-31 T 21-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VFU_RS01460 b7cc4da3d8e853676c334cd179cbc147 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 248 258 6.3E-31 T 21-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VFU_RS01460 b7cc4da3d8e853676c334cd179cbc147 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 407 424 6.3E-31 T 21-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VFU_RS01460 b7cc4da3d8e853676c334cd179cbc147 426 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 313 324 - T 21-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VFU_RS01460 b7cc4da3d8e853676c334cd179cbc147 426 Gene3D G3DSA:1.10.940.10 1 144 6.7E-44 T 21-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 VFU_RS01460 b7cc4da3d8e853676c334cd179cbc147 426 Pfam PF01029 NusB family 1 123 4.4E-25 T 21-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 VFU_RS01460 b7cc4da3d8e853676c334cd179cbc147 426 Pfam PF01189 16S rRNA methyltransferase RsmB/F 238 422 8.5E-69 T 21-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VFU_RS01460 b7cc4da3d8e853676c334cd179cbc147 426 SUPERFAMILY SSF53335 139 424 3.04E-78 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS01460 b7cc4da3d8e853676c334cd179cbc147 426 PANTHER PTHR22807:SF30 28 424 1.4E-125 T 21-04-2016 VFU_RS01460 b7cc4da3d8e853676c334cd179cbc147 426 SUPERFAMILY SSF48013 1 146 4.84E-37 T 21-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 VFU_RS01460 b7cc4da3d8e853676c334cd179cbc147 426 Gene3D G3DSA:3.30.70.1170 170 227 3.0E-26 T 21-04-2016 VFU_RS01460 b7cc4da3d8e853676c334cd179cbc147 426 PANTHER PTHR22807 28 424 1.4E-125 T 21-04-2016 VFU_RS01460 b7cc4da3d8e853676c334cd179cbc147 426 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 4 426 1.8E-149 T 21-04-2016 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VFU_RS03200 a2b6a5da1222176f28c0a2bce306221f 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 7.2E-23 T 21-04-2016 IPR000595 Cyclic nucleotide-binding domain VFU_RS03200 a2b6a5da1222176f28c0a2bce306221f 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 21-04-2016 IPR018488 Cyclic nucleotide-binding, conserved site VFU_RS03200 a2b6a5da1222176f28c0a2bce306221f 210 Gene3D G3DSA:2.60.120.10 6 143 1.9E-43 T 21-04-2016 IPR014710 RmlC-like jelly roll fold VFU_RS03200 a2b6a5da1222176f28c0a2bce306221f 210 PANTHER PTHR24567 1 207 6.7E-154 T 21-04-2016 VFU_RS03200 a2b6a5da1222176f28c0a2bce306221f 210 Gene3D G3DSA:1.10.10.10 144 207 1.1E-26 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS03200 a2b6a5da1222176f28c0a2bce306221f 210 SMART SM00100 2 122 2.5E-26 T 21-04-2016 IPR000595 Cyclic nucleotide-binding domain VFU_RS03200 a2b6a5da1222176f28c0a2bce306221f 210 SUPERFAMILY SSF51206 8 137 1.44E-34 T 21-04-2016 IPR018490 Cyclic nucleotide-binding-like VFU_RS03200 a2b6a5da1222176f28c0a2bce306221f 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 8.6E-16 T 21-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VFU_RS03200 a2b6a5da1222176f28c0a2bce306221f 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 21-04-2016 IPR018488 Cyclic nucleotide-binding, conserved site VFU_RS03200 a2b6a5da1222176f28c0a2bce306221f 210 SMART SM00419 160 208 4.2E-17 T 21-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VFU_RS03200 a2b6a5da1222176f28c0a2bce306221f 210 PANTHER PTHR24567:SF27 1 207 6.7E-154 T 21-04-2016 VFU_RS03200 a2b6a5da1222176f28c0a2bce306221f 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 21-04-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 VFU_RS03200 a2b6a5da1222176f28c0a2bce306221f 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 5.7E-11 T 21-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VFU_RS03200 a2b6a5da1222176f28c0a2bce306221f 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 5.7E-11 T 21-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VFU_RS03200 a2b6a5da1222176f28c0a2bce306221f 210 SUPERFAMILY SSF46785 139 207 3.88E-16 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS14430 05683a2c81f75d221b840d545cb3df35 594 Gene3D G3DSA:2.40.50.100 522 593 1.5E-24 T 21-04-2016 VFU_RS14430 05683a2c81f75d221b840d545cb3df35 594 SUPERFAMILY SSF51569 1 300 1.28E-87 T 21-04-2016 VFU_RS14430 05683a2c81f75d221b840d545cb3df35 594 SUPERFAMILY SSF51230 515 593 3.01E-20 T 21-04-2016 IPR011053 Single hybrid motif VFU_RS14430 05683a2c81f75d221b840d545cb3df35 594 PANTHER PTHR18866:SF109 7 587 5.9E-224 T 21-04-2016 VFU_RS14430 05683a2c81f75d221b840d545cb3df35 594 Pfam PF00364 Biotin-requiring enzyme 528 592 1.7E-16 T 21-04-2016 IPR000089 Biotin/lipoyl attachment VFU_RS14430 05683a2c81f75d221b840d545cb3df35 594 Pfam PF00682 HMGL-like 6 270 7.5E-58 T 21-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 VFU_RS14430 05683a2c81f75d221b840d545cb3df35 594 Pfam PF02436 Conserved carboxylase domain 292 492 2.4E-58 T 21-04-2016 IPR003379 Carboxylase, conserved domain VFU_RS14430 05683a2c81f75d221b840d545cb3df35 594 Gene3D G3DSA:3.20.20.70 2 282 7.8E-113 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS14430 05683a2c81f75d221b840d545cb3df35 594 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 550 567 - T 21-04-2016 IPR001882 Biotin-binding site VFU_RS14430 05683a2c81f75d221b840d545cb3df35 594 SUPERFAMILY SSF89000 297 457 9.02E-51 T 21-04-2016 VFU_RS14430 05683a2c81f75d221b840d545cb3df35 594 PANTHER PTHR18866 7 587 5.9E-224 T 21-04-2016 VFU_RS14430 05683a2c81f75d221b840d545cb3df35 594 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 7 588 1.5E-265 T 21-04-2016 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 VFU_RS11085 ce11471394dfe6717bbed0995fc958e6 303 Gene3D G3DSA:3.40.190.10 181 266 1.0E-17 T 21-04-2016 VFU_RS11085 ce11471394dfe6717bbed0995fc958e6 303 SUPERFAMILY SSF46785 1 112 6.02E-21 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS11085 ce11471394dfe6717bbed0995fc958e6 303 Gene3D G3DSA:3.40.190.10 90 180 3.2E-13 T 21-04-2016 VFU_RS11085 ce11471394dfe6717bbed0995fc958e6 303 PANTHER PTHR30126 1 303 3.2E-185 T 21-04-2016 VFU_RS11085 ce11471394dfe6717bbed0995fc958e6 303 PANTHER PTHR30126:SF25 1 303 3.2E-185 T 21-04-2016 VFU_RS11085 ce11471394dfe6717bbed0995fc958e6 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.9E-7 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS11085 ce11471394dfe6717bbed0995fc958e6 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.9E-7 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS11085 ce11471394dfe6717bbed0995fc958e6 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.9E-7 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS11085 ce11471394dfe6717bbed0995fc958e6 303 Pfam PF03466 LysR substrate binding domain 89 293 1.5E-40 T 21-04-2016 IPR005119 LysR, substrate-binding VFU_RS11085 ce11471394dfe6717bbed0995fc958e6 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 3.5E-18 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS11085 ce11471394dfe6717bbed0995fc958e6 303 Gene3D G3DSA:1.10.10.10 1 87 4.3E-25 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS11085 ce11471394dfe6717bbed0995fc958e6 303 SUPERFAMILY SSF53850 89 296 8.14E-39 T 21-04-2016 VFU_RS08900 ce1a52758fcd3adb7e1113a6a7b737a2 353 SUPERFAMILY SSF111369 58 107 2.48E-14 T 21-04-2016 VFU_RS08900 ce1a52758fcd3adb7e1113a6a7b737a2 353 SUPERFAMILY SSF111369 195 288 2.48E-14 T 21-04-2016 VFU_RS08900 ce1a52758fcd3adb7e1113a6a7b737a2 353 SUPERFAMILY SSF111369 143 159 2.48E-14 T 21-04-2016 VFU_RS08900 ce1a52758fcd3adb7e1113a6a7b737a2 353 PANTHER PTHR30386:SF7 18 352 1.1E-83 T 21-04-2016 VFU_RS08900 ce1a52758fcd3adb7e1113a6a7b737a2 353 PANTHER PTHR30386 18 352 1.1E-83 T 21-04-2016 VFU_RS08900 ce1a52758fcd3adb7e1113a6a7b737a2 353 Gene3D G3DSA:2.40.50.100 60 92 4.6E-16 T 21-04-2016 VFU_RS08900 ce1a52758fcd3adb7e1113a6a7b737a2 353 Gene3D G3DSA:2.40.50.100 216 247 4.6E-16 T 21-04-2016 VFU_RS08900 ce1a52758fcd3adb7e1113a6a7b737a2 353 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 294 4.9E-18 T 21-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VFU_RS10125 b7385c3038b8d9a66b681cdc00a7db4b 239 Pfam PF13432 Tetratricopeptide repeat 40 101 0.0036 T 21-04-2016 VFU_RS10125 b7385c3038b8d9a66b681cdc00a7db4b 239 Gene3D G3DSA:1.25.40.10 35 238 3.3E-26 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VFU_RS10125 b7385c3038b8d9a66b681cdc00a7db4b 239 SUPERFAMILY SSF48452 28 201 1.52E-17 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VFU_RS10125 b7385c3038b8d9a66b681cdc00a7db4b 239 PANTHER PTHR23083 33 239 1.8E-17 T 21-04-2016 VFU_RS10125 b7385c3038b8d9a66b681cdc00a7db4b 239 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 7 235 3.6E-73 T 21-04-2016 IPR013360 Pilus biogenesis/stability type IV, PilW VFU_RS10125 b7385c3038b8d9a66b681cdc00a7db4b 239 SMART SM00028 103 136 61.0 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VFU_RS10125 b7385c3038b8d9a66b681cdc00a7db4b 239 SMART SM00028 139 172 0.32 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VFU_RS10125 b7385c3038b8d9a66b681cdc00a7db4b 239 SMART SM00028 69 102 33.0 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VFU_RS10125 b7385c3038b8d9a66b681cdc00a7db4b 239 SMART SM00028 35 68 0.13 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VFU_RS10125 b7385c3038b8d9a66b681cdc00a7db4b 239 Pfam PF13424 Tetratricopeptide repeat 104 169 1.9E-7 T 21-04-2016 VFU_RS13315 0c68ca09ef077564408b85b643b7e7b3 171 PANTHER PTHR33420:SF12 5 171 9.7E-29 T 21-04-2016 VFU_RS13315 0c68ca09ef077564408b85b643b7e7b3 171 Pfam PF00419 Fimbrial protein 27 171 2.0E-12 T 21-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 VFU_RS13315 0c68ca09ef077564408b85b643b7e7b3 171 SUPERFAMILY SSF49401 25 171 5.97E-31 T 21-04-2016 IPR008966 Adhesion domain VFU_RS13315 0c68ca09ef077564408b85b643b7e7b3 171 PANTHER PTHR33420 5 171 9.7E-29 T 21-04-2016 VFU_RS13315 0c68ca09ef077564408b85b643b7e7b3 171 Gene3D G3DSA:2.60.40.1090 25 171 1.1E-34 T 21-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 VFU_RS13210 c15310f5050eaa811d9147865dcbe954 138 Pfam PF13633 Prokaryotic N-terminal methylation site 6 31 5.3E-10 T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site VFU_RS13210 c15310f5050eaa811d9147865dcbe954 138 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site VFU_RS13210 c15310f5050eaa811d9147865dcbe954 138 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 27 8.0E-6 T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site VFU_RS01710 e0c52016cc0f58bf06deb193c255ae16 92 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 2 65 6.0E-19 T 21-04-2016 VFU_RS01710 e0c52016cc0f58bf06deb193c255ae16 92 Pfam PF00936 BMC domain 4 79 3.7E-28 T 21-04-2016 IPR000249 Microcompartment protein, bacteria VFU_RS01710 e0c52016cc0f58bf06deb193c255ae16 92 PANTHER PTHR33941 1 86 6.2E-40 T 21-04-2016 VFU_RS01710 e0c52016cc0f58bf06deb193c255ae16 92 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 21 40 - T 21-04-2016 IPR020808 Bacterial microcompartments protein, conserved site VFU_RS01710 e0c52016cc0f58bf06deb193c255ae16 92 SMART SM00877 3 79 4.7E-35 T 21-04-2016 IPR000249 Microcompartment protein, bacteria VFU_RS01710 e0c52016cc0f58bf06deb193c255ae16 92 SUPERFAMILY SSF143414 3 87 2.22E-31 T 21-04-2016 VFU_RS02615 bbc738a6a68b261e75d22d5abd4f0afd 403 PIRSF PIRSF015761 4 402 4.6E-37 T 21-04-2016 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 VFU_RS02615 bbc738a6a68b261e75d22d5abd4f0afd 403 Pfam PF05134 Type II secretion system (T2SS), protein L 5 240 7.1E-67 T 21-04-2016 IPR024230 GspL, cytoplasmic actin-ATPase-like domain VFU_RS02615 bbc738a6a68b261e75d22d5abd4f0afd 403 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 5 401 1.2E-101 T 21-04-2016 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 VFU_RS02615 bbc738a6a68b261e75d22d5abd4f0afd 403 Pfam PF12693 GspL periplasmic domain 244 402 2.2E-51 T 21-04-2016 IPR025691 GspL periplasmic domain VFU_RS02615 bbc738a6a68b261e75d22d5abd4f0afd 403 SUPERFAMILY SSF53067 2 143 4.99E-41 T 21-04-2016 VFU_RS02615 bbc738a6a68b261e75d22d5abd4f0afd 403 SUPERFAMILY SSF53067 146 237 1.81E-17 T 21-04-2016 VFU_RS08835 db0b5a189419e00aada36a63756869d3 115 PIRSF PIRSF028139 4 115 8.9E-41 T 21-04-2016 IPR014980 Dopa 4,5-dioxygenase VFU_RS08835 db0b5a189419e00aada36a63756869d3 115 Pfam PF08883 Dopa 4,5-dioxygenase family 14 113 2.3E-32 T 21-04-2016 IPR014980 Dopa 4,5-dioxygenase VFU_RS08835 db0b5a189419e00aada36a63756869d3 115 PANTHER PTHR36423 13 115 1.4E-17 T 21-04-2016 VFU_RS08835 db0b5a189419e00aada36a63756869d3 115 SUPERFAMILY SSF143410 5 115 2.22E-41 T 21-04-2016 IPR023389 DOPA-like domain VFU_RS08835 db0b5a189419e00aada36a63756869d3 115 Gene3D G3DSA:3.30.70.1240 4 115 6.8E-39 T 21-04-2016 IPR023389 DOPA-like domain VFU_RS03230 23d071a6648cce48456f455c86f8d80d 189 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 8 188 47.226 T 21-04-2016 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 VFU_RS03230 23d071a6648cce48456f455c86f8d80d 189 PANTHER PTHR10204 12 182 3.5E-66 T 21-04-2016 VFU_RS03230 23d071a6648cce48456f455c86f8d80d 189 SUPERFAMILY SSF52218 14 183 9.85E-47 T 21-04-2016 IPR029039 Flavoprotein-like domain VFU_RS03230 23d071a6648cce48456f455c86f8d80d 189 Pfam PF02525 Flavodoxin-like fold 14 174 1.8E-41 T 21-04-2016 IPR003680 Flavodoxin-like fold VFU_RS03230 23d071a6648cce48456f455c86f8d80d 189 PANTHER PTHR10204:SF42 12 182 3.5E-66 T 21-04-2016 VFU_RS03230 23d071a6648cce48456f455c86f8d80d 189 Gene3D G3DSA:3.40.50.360 14 182 1.8E-45 T 21-04-2016 IPR029039 Flavoprotein-like domain VFU_RS00645 19ca4248a5bcb0f1f6f311865a26b411 358 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 3 346 4.8E-157 T 21-04-2016 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|UniPathway: UPA00281 VFU_RS00645 19ca4248a5bcb0f1f6f311865a26b411 358 Pfam PF00953 Glycosyl transferase family 4 71 226 4.2E-30 T 21-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VFU_RS00645 19ca4248a5bcb0f1f6f311865a26b411 358 PANTHER PTHR22926:SF3 1 353 9.7E-76 T 21-04-2016 VFU_RS00645 19ca4248a5bcb0f1f6f311865a26b411 358 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 4 348 27.28 T 21-04-2016 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|UniPathway: UPA00281 VFU_RS00645 19ca4248a5bcb0f1f6f311865a26b411 358 PANTHER PTHR22926 1 353 9.7E-76 T 21-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VFU_RS09630 655bd7518e5dcb5cd20375569a3d05ec 451 Gene3D G3DSA:1.20.1250.20 250 433 1.9E-19 T 21-04-2016 VFU_RS09630 655bd7518e5dcb5cd20375569a3d05ec 451 Gene3D G3DSA:1.20.1250.20 15 230 2.3E-25 T 21-04-2016 VFU_RS09630 655bd7518e5dcb5cd20375569a3d05ec 451 Pfam PF00083 Sugar (and other) transporter 25 232 2.0E-17 T 21-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 VFU_RS09630 655bd7518e5dcb5cd20375569a3d05ec 451 ProSitePatterns PS00216 Sugar transport proteins signature 1. 303 320 - T 21-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 VFU_RS09630 655bd7518e5dcb5cd20375569a3d05ec 451 Pfam PF07690 Major Facilitator Superfamily 260 434 1.2E-14 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VFU_RS09630 655bd7518e5dcb5cd20375569a3d05ec 451 SUPERFAMILY SSF103473 7 435 2.88E-64 T 21-04-2016 IPR020846 Major facilitator superfamily domain VFU_RS09630 655bd7518e5dcb5cd20375569a3d05ec 451 PANTHER PTHR23508:SF1 9 441 9.9E-144 T 21-04-2016 VFU_RS09630 655bd7518e5dcb5cd20375569a3d05ec 451 PANTHER PTHR23508 9 441 9.9E-144 T 21-04-2016 VFU_RS05040 01c2f97d061eb2ecf765531559bb558d 377 PANTHER PTHR18895 82 377 1.9E-134 T 21-04-2016 VFU_RS05040 01c2f97d061eb2ecf765531559bb558d 377 Pfam PF05175 Methyltransferase small domain 200 373 1.6E-54 T 21-04-2016 IPR007848 Methyltransferase small domain GO:0008168 VFU_RS05040 01c2f97d061eb2ecf765531559bb558d 377 Gene3D G3DSA:3.40.50.150 192 372 1.5E-22 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS05040 01c2f97d061eb2ecf765531559bb558d 377 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 303 309 - T 21-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VFU_RS05040 01c2f97d061eb2ecf765531559bb558d 377 SUPERFAMILY SSF53335 198 349 4.07E-26 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS05040 01c2f97d061eb2ecf765531559bb558d 377 PIRSF PIRSF037565 1 377 4.9E-170 T 21-04-2016 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VFU_RS05040 01c2f97d061eb2ecf765531559bb558d 377 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 2 376 49.24 T 21-04-2016 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VFU_RS05040 01c2f97d061eb2ecf765531559bb558d 377 PANTHER PTHR18895:SF6 82 377 1.9E-134 T 21-04-2016 VFU_RS10490 fedbe3091b49851d85f724de28a90d8f 255 Gene3D G3DSA:3.30.460.10 24 126 7.5E-12 T 21-04-2016 VFU_RS10490 fedbe3091b49851d85f724de28a90d8f 255 SUPERFAMILY SSF81301 11 81 1.31E-8 T 21-04-2016 VFU_RS10490 fedbe3091b49851d85f724de28a90d8f 255 Pfam PF01909 Nucleotidyltransferase domain 35 79 8.5E-6 T 21-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 VFU_RS01035 f1508b8f0b0f240e0cc6d642e6fe63f5 213 Gene3D G3DSA:1.10.760.10 43 129 3.1E-6 T 21-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VFU_RS01035 f1508b8f0b0f240e0cc6d642e6fe63f5 213 SUPERFAMILY SSF46626 11 129 1.09E-8 T 21-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VFU_RS00630 99e7dc91e83c847a4b8dbdf148b65dbd 359 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 339 4.4E-153 T 21-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 VFU_RS00630 99e7dc91e83c847a4b8dbdf148b65dbd 359 SUPERFAMILY SSF51735 1 337 2.5E-87 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS00630 99e7dc91e83c847a4b8dbdf148b65dbd 359 PANTHER PTHR10366:SF41 2 353 5.5E-172 T 21-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 VFU_RS00630 99e7dc91e83c847a4b8dbdf148b65dbd 359 Gene3D G3DSA:3.90.25.10 192 339 3.0E-51 T 21-04-2016 VFU_RS00630 99e7dc91e83c847a4b8dbdf148b65dbd 359 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 326 3.5E-94 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS00630 99e7dc91e83c847a4b8dbdf148b65dbd 359 Gene3D G3DSA:3.40.50.720 1 191 5.4E-64 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS00630 99e7dc91e83c847a4b8dbdf148b65dbd 359 PANTHER PTHR10366 2 353 5.5E-172 T 21-04-2016 VFU_RS06425 897f53030ca54fbcea17e5df61c5376c 396 Gene3D G3DSA:1.20.120.160 285 386 4.4E-21 T 21-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VFU_RS06425 897f53030ca54fbcea17e5df61c5376c 396 SMART SM00073 296 391 9.5E-4 T 21-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VFU_RS06425 897f53030ca54fbcea17e5df61c5376c 396 Pfam PF01627 Hpt domain 306 382 7.0E-11 T 21-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VFU_RS06425 897f53030ca54fbcea17e5df61c5376c 396 SUPERFAMILY SSF47226 287 377 2.09E-16 T 21-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VFU_RS06450 3792663ddaec2b5bb9c0ac1a7865d659 900 Gene3D G3DSA:1.20.1090.10 643 863 8.5E-67 T 21-04-2016 VFU_RS06450 3792663ddaec2b5bb9c0ac1a7865d659 900 SUPERFAMILY SSF56796 452 863 1.16E-114 T 21-04-2016 VFU_RS06450 3792663ddaec2b5bb9c0ac1a7865d659 900 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 631 659 - T 21-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VFU_RS06450 3792663ddaec2b5bb9c0ac1a7865d659 900 Gene3D G3DSA:3.40.50.1970 451 642 1.0E-60 T 21-04-2016 VFU_RS06450 3792663ddaec2b5bb9c0ac1a7865d659 900 PIRSF PIRSF000111 1 865 0.0 T 21-04-2016 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00592+1.1.1.1|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00650+1.2.1.10|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7085|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7180|MetaCyc: PWY-7396 VFU_RS06450 3792663ddaec2b5bb9c0ac1a7865d659 900 PANTHER PTHR11496 361 866 0.0 T 21-04-2016 VFU_RS06450 3792663ddaec2b5bb9c0ac1a7865d659 900 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 719 739 - T 21-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VFU_RS06450 3792663ddaec2b5bb9c0ac1a7865d659 900 PANTHER PTHR11496:SF79 361 866 0.0 T 21-04-2016 VFU_RS06450 3792663ddaec2b5bb9c0ac1a7865d659 900 Pfam PF00465 Iron-containing alcohol dehydrogenase 458 849 7.1E-112 T 21-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 VFU_RS06450 3792663ddaec2b5bb9c0ac1a7865d659 900 SUPERFAMILY SSF53720 6 454 2.62E-82 T 21-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 VFU_RS06450 3792663ddaec2b5bb9c0ac1a7865d659 900 Pfam PF00171 Aldehyde dehydrogenase family 5 400 1.9E-24 T 21-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 VFU_RS06450 3792663ddaec2b5bb9c0ac1a7865d659 900 Gene3D G3DSA:3.40.605.10 2 225 2.9E-23 T 21-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 VFU_RS06450 3792663ddaec2b5bb9c0ac1a7865d659 900 Gene3D G3DSA:3.40.309.10 309 405 4.6E-26 T 21-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 VFU_RS06450 3792663ddaec2b5bb9c0ac1a7865d659 900 Gene3D G3DSA:3.40.309.10 226 273 4.6E-26 T 21-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 VFU_RS02215 b849a64f7e76fc91ffa026e3a615e74e 842 PANTHER PTHR38760 2 842 0.0 T 21-04-2016 VFU_RS02215 b849a64f7e76fc91ffa026e3a615e74e 842 Pfam PF12633 Adenylate cyclase NT domain 6 198 1.4E-76 T 21-04-2016 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 VFU_RS02215 b849a64f7e76fc91ffa026e3a615e74e 842 Pfam PF01295 Adenylate cyclase, class-I 226 828 8.1E-252 T 21-04-2016 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 VFU_RS02215 b849a64f7e76fc91ffa026e3a615e74e 842 PIRSF PIRSF001444 1 842 0.0 T 21-04-2016 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 VFU_RS13190 42374fa3e64eeaff26b63777d733cb79 295 Gene3D G3DSA:3.40.190.10 92 177 7.6E-23 T 21-04-2016 VFU_RS13190 42374fa3e64eeaff26b63777d733cb79 295 Gene3D G3DSA:1.10.10.10 7 88 3.4E-26 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS13190 42374fa3e64eeaff26b63777d733cb79 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 63 6.7E-20 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS13190 42374fa3e64eeaff26b63777d733cb79 295 PANTHER PTHR30537:SF10 1 289 3.5E-143 T 21-04-2016 VFU_RS13190 42374fa3e64eeaff26b63777d733cb79 295 Gene3D G3DSA:3.40.190.10 178 255 1.2E-21 T 21-04-2016 VFU_RS13190 42374fa3e64eeaff26b63777d733cb79 295 Pfam PF03466 LysR substrate binding domain 88 288 1.1E-45 T 21-04-2016 IPR005119 LysR, substrate-binding VFU_RS13190 42374fa3e64eeaff26b63777d733cb79 295 SUPERFAMILY SSF53850 89 290 2.71E-46 T 21-04-2016 VFU_RS13190 42374fa3e64eeaff26b63777d733cb79 295 SUPERFAMILY SSF46785 5 88 4.21E-23 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS13190 42374fa3e64eeaff26b63777d733cb79 295 PANTHER PTHR30537 1 289 3.5E-143 T 21-04-2016 VFU_RS04300 5c6a756541b02b7425abe8e25b66a543 302 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 12 94 3.4E-20 T 21-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VFU_RS04300 5c6a756541b02b7425abe8e25b66a543 302 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 13 302 4.2E-116 T 21-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 VFU_RS04300 5c6a756541b02b7425abe8e25b66a543 302 PANTHER PTHR30349:SF5 11 302 1.5E-122 T 21-04-2016 VFU_RS04300 5c6a756541b02b7425abe8e25b66a543 302 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 8 302 61.465 T 21-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 VFU_RS04300 5c6a756541b02b7425abe8e25b66a543 302 Gene3D G3DSA:1.10.443.10 117 293 1.3E-57 T 21-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VFU_RS04300 5c6a756541b02b7425abe8e25b66a543 302 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 8 302 30.229 T 21-04-2016 IPR023009 Tyrosine recombinase XerC/XerD VFU_RS04300 5c6a756541b02b7425abe8e25b66a543 302 Pfam PF00589 Phage integrase family 117 288 7.1E-54 T 21-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VFU_RS04300 5c6a756541b02b7425abe8e25b66a543 302 Gene3D G3DSA:1.10.150.130 11 103 1.9E-28 T 21-04-2016 IPR023109 Integrase/recombinase, N-terminal VFU_RS04300 5c6a756541b02b7425abe8e25b66a543 302 PANTHER PTHR30349 11 302 1.5E-122 T 21-04-2016 VFU_RS04300 5c6a756541b02b7425abe8e25b66a543 302 SUPERFAMILY SSF56349 11 293 2.5E-56 T 21-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VFU_RS09580 e87df4cbb33b29b72b2e285adb5b10dc 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 288 304 4.8E-45 T 21-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VFU_RS09580 e87df4cbb33b29b72b2e285adb5b10dc 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 444 462 4.8E-45 T 21-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VFU_RS09580 e87df4cbb33b29b72b2e285adb5b10dc 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 145 165 4.8E-45 T 21-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VFU_RS09580 e87df4cbb33b29b72b2e285adb5b10dc 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 241 260 4.8E-45 T 21-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VFU_RS09580 e87df4cbb33b29b72b2e285adb5b10dc 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 261 280 4.8E-45 T 21-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VFU_RS09580 e87df4cbb33b29b72b2e285adb5b10dc 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 400 421 4.8E-45 T 21-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VFU_RS09580 e87df4cbb33b29b72b2e285adb5b10dc 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 330 349 4.8E-45 T 21-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VFU_RS09580 e87df4cbb33b29b72b2e285adb5b10dc 494 PANTHER PTHR34217:SF1 1 494 1.1E-247 T 21-04-2016 VFU_RS09580 e87df4cbb33b29b72b2e285adb5b10dc 494 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 10 492 1.6E-90 T 21-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VFU_RS09580 e87df4cbb33b29b72b2e285adb5b10dc 494 SUPERFAMILY SSF55486 1 493 1.59E-117 T 21-04-2016 VFU_RS09580 e87df4cbb33b29b72b2e285adb5b10dc 494 PANTHER PTHR34217 1 494 1.1E-247 T 21-04-2016 VFU_RS09580 e87df4cbb33b29b72b2e285adb5b10dc 494 PIRSF PIRSF006615 1 494 1.9E-194 T 21-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VFU_RS07155 7ee0a96795ae1a9fb902f5cf0d8715f2 530 PANTHER PTHR30443 1 526 1.1E-201 T 21-04-2016 VFU_RS07155 7ee0a96795ae1a9fb902f5cf0d8715f2 530 Pfam PF08019 Domain of unknown function (DUF1705) 44 195 1.6E-42 T 21-04-2016 IPR012549 Domain of unknown function DUF1705 GO:0016021 VFU_RS07155 7ee0a96795ae1a9fb902f5cf0d8715f2 530 Pfam PF00884 Sulfatase 222 510 9.7E-43 T 21-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 VFU_RS07155 7ee0a96795ae1a9fb902f5cf0d8715f2 530 SUPERFAMILY SSF53649 285 478 2.62E-18 T 21-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VFU_RS07155 7ee0a96795ae1a9fb902f5cf0d8715f2 530 PANTHER PTHR30443:SF0 1 526 1.1E-201 T 21-04-2016 VFU_RS07155 7ee0a96795ae1a9fb902f5cf0d8715f2 530 Gene3D G3DSA:3.40.720.10 328 478 3.5E-13 T 21-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VFU_RS00205 452d831fa3584473343227c4e4c04516 261 Gene3D G3DSA:3.90.79.10 95 249 1.3E-40 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VFU_RS00205 452d831fa3584473343227c4e4c04516 261 SUPERFAMILY SSF55811 58 245 8.12E-43 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VFU_RS00205 452d831fa3584473343227c4e4c04516 261 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 98 126 2.1E-9 T 21-04-2016 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 VFU_RS00205 452d831fa3584473343227c4e4c04516 261 Hamap MF_00297 NADH pyrophosphatase [nudC]. 1 259 41.946 T 21-04-2016 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 VFU_RS00205 452d831fa3584473343227c4e4c04516 261 PANTHER PTHR22769 87 229 1.1E-56 T 21-04-2016 VFU_RS00205 452d831fa3584473343227c4e4c04516 261 ProSitePatterns PS00893 Nudix box signature. 161 182 - T 21-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VFU_RS00205 452d831fa3584473343227c4e4c04516 261 PRINTS PR00502 NUDIX hydrolase family signature 156 170 7.0E-5 T 21-04-2016 IPR020476 NUDIX hydrolase VFU_RS00205 452d831fa3584473343227c4e4c04516 261 PRINTS PR00502 NUDIX hydrolase family signature 170 185 7.0E-5 T 21-04-2016 IPR020476 NUDIX hydrolase VFU_RS00205 452d831fa3584473343227c4e4c04516 261 Pfam PF00293 NUDIX domain 134 233 1.8E-17 T 21-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 VFU_RS00205 452d831fa3584473343227c4e4c04516 261 PANTHER PTHR22769:SF7 87 229 1.1E-56 T 21-04-2016 VFU_RS01835 45860852ad84ae0bfe32a520bb2ca01e 387 SUPERFAMILY SSF53901 263 386 1.98E-44 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VFU_RS01835 45860852ad84ae0bfe32a520bb2ca01e 387 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 1 387 60.327 T 21-04-2016 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 VFU_RS01835 45860852ad84ae0bfe32a520bb2ca01e 387 PIRSF PIRSF000429 1 387 9.4E-134 T 21-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 VFU_RS01835 45860852ad84ae0bfe32a520bb2ca01e 387 Pfam PF02803 Thiolase, C-terminal domain 262 386 1.5E-48 T 21-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 VFU_RS01835 45860852ad84ae0bfe32a520bb2ca01e 387 SUPERFAMILY SSF53901 1 258 2.57E-80 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VFU_RS01835 45860852ad84ae0bfe32a520bb2ca01e 387 PANTHER PTHR18919:SF69 1 387 1.6E-205 T 21-04-2016 VFU_RS01835 45860852ad84ae0bfe32a520bb2ca01e 387 ProSitePatterns PS00099 Thiolases active site. 368 381 - T 21-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 VFU_RS01835 45860852ad84ae0bfe32a520bb2ca01e 387 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 3 387 8.6E-237 T 21-04-2016 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 VFU_RS01835 45860852ad84ae0bfe32a520bb2ca01e 387 Pfam PF00108 Thiolase, N-terminal domain 4 253 5.0E-84 T 21-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 VFU_RS01835 45860852ad84ae0bfe32a520bb2ca01e 387 ProSitePatterns PS00737 Thiolases signature 2. 333 349 - T 21-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 VFU_RS01835 45860852ad84ae0bfe32a520bb2ca01e 387 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 21-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 VFU_RS01835 45860852ad84ae0bfe32a520bb2ca01e 387 PANTHER PTHR18919 1 387 1.6E-205 T 21-04-2016 VFU_RS01835 45860852ad84ae0bfe32a520bb2ca01e 387 Gene3D G3DSA:3.40.47.10 4 126 3.7E-64 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VFU_RS01835 45860852ad84ae0bfe32a520bb2ca01e 387 Gene3D G3DSA:3.40.47.10 184 267 3.7E-64 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VFU_RS01835 45860852ad84ae0bfe32a520bb2ca01e 387 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 385 2.3E-143 T 21-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 VFU_RS01835 45860852ad84ae0bfe32a520bb2ca01e 387 Gene3D G3DSA:3.40.47.10 268 386 2.2E-60 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VFU_RS01835 45860852ad84ae0bfe32a520bb2ca01e 387 Gene3D G3DSA:3.40.47.10 143 183 2.2E-60 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VFU_RS11365 9b01efb46e0bf844b1ad1ff713c75b12 353 PANTHER PTHR30573 1 352 8.0E-166 T 21-04-2016 VFU_RS11365 9b01efb46e0bf844b1ad1ff713c75b12 353 SUPERFAMILY SSF142754 29 341 1.7E-106 T 21-04-2016 VFU_RS11365 9b01efb46e0bf844b1ad1ff713c75b12 353 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 29 341 1.2E-115 T 21-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 VFU_RS11365 9b01efb46e0bf844b1ad1ff713c75b12 353 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 66.873 T 21-04-2016 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 VFU_RS11365 9b01efb46e0bf844b1ad1ff713c75b12 353 Pfam PF02445 Quinolinate synthetase A protein 32 340 6.5E-102 T 21-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 VFU_RS04725 96a05829b46b672a596617deeb113208 510 SUPERFAMILY SSF55681 161 507 1.24E-116 T 21-04-2016 VFU_RS04725 96a05829b46b672a596617deeb113208 510 Pfam PF00152 tRNA synthetases class II (D, K and N) 161 506 1.2E-77 T 21-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VFU_RS04725 96a05829b46b672a596617deeb113208 510 PANTHER PTHR22594:SF4 6 509 3.6E-263 T 21-04-2016 VFU_RS04725 96a05829b46b672a596617deeb113208 510 PANTHER PTHR22594 6 509 3.6E-263 T 21-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VFU_RS04725 96a05829b46b672a596617deeb113208 510 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 19 509 9.6E-201 T 21-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 VFU_RS04725 96a05829b46b672a596617deeb113208 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 198 208 6.9E-39 T 21-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 VFU_RS04725 96a05829b46b672a596617deeb113208 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 214 230 6.9E-39 T 21-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 VFU_RS04725 96a05829b46b672a596617deeb113208 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 261 278 6.9E-39 T 21-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 VFU_RS04725 96a05829b46b672a596617deeb113208 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 243 256 6.9E-39 T 21-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 VFU_RS04725 96a05829b46b672a596617deeb113208 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 391 407 6.9E-39 T 21-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 VFU_RS04725 96a05829b46b672a596617deeb113208 510 Gene3D G3DSA:3.30.930.10 156 505 1.2E-117 T 21-04-2016 VFU_RS04725 96a05829b46b672a596617deeb113208 510 Pfam PF01336 OB-fold nucleic acid binding domain 73 145 6.6E-8 T 21-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VFU_RS04725 96a05829b46b672a596617deeb113208 510 Gene3D G3DSA:2.40.50.140 19 153 7.4E-34 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS04725 96a05829b46b672a596617deeb113208 510 SUPERFAMILY SSF50249 16 154 1.2E-32 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS04725 96a05829b46b672a596617deeb113208 510 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 24 509 43.338 T 21-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 VFU_RS09800 c55da4c0a50a41b25eb47bbefdb9ff3e 342 PANTHER PTHR30085 8 311 3.6E-192 T 21-04-2016 VFU_RS09800 c55da4c0a50a41b25eb47bbefdb9ff3e 342 SUPERFAMILY SSF53850 29 259 7.04E-49 T 21-04-2016 VFU_RS09800 c55da4c0a50a41b25eb47bbefdb9ff3e 342 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 257 5.1E-29 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VFU_RS09800 c55da4c0a50a41b25eb47bbefdb9ff3e 342 SMART SM00062 38 267 2.8E-55 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VFU_RS09800 c55da4c0a50a41b25eb47bbefdb9ff3e 342 Gene3D G3DSA:3.40.190.10 129 207 1.9E-13 T 21-04-2016 VFU_RS09800 c55da4c0a50a41b25eb47bbefdb9ff3e 342 PANTHER PTHR30085:SF5 8 311 3.6E-192 T 21-04-2016 VFU_RS09800 c55da4c0a50a41b25eb47bbefdb9ff3e 342 Gene3D G3DSA:3.40.190.10 37 128 2.6E-16 T 21-04-2016 VFU_RS09800 c55da4c0a50a41b25eb47bbefdb9ff3e 342 Gene3D G3DSA:3.40.190.10 227 257 2.6E-16 T 21-04-2016 VFU_RS21740 e8c828af34a06d9ec423036de11fe40a 460 PANTHER PTHR10434:SF15 318 460 6.3E-78 T 21-04-2016 VFU_RS21740 e8c828af34a06d9ec423036de11fe40a 460 Gene3D G3DSA:1.20.1250.20 26 181 4.9E-8 T 21-04-2016 VFU_RS21740 e8c828af34a06d9ec423036de11fe40a 460 SUPERFAMILY SSF103473 25 398 2.35E-27 T 21-04-2016 IPR020846 Major facilitator superfamily domain VFU_RS21740 e8c828af34a06d9ec423036de11fe40a 460 PANTHER PTHR10434 318 460 6.3E-78 T 21-04-2016 VFU_RS21740 e8c828af34a06d9ec423036de11fe40a 460 Pfam PF01553 Acyltransferase 414 458 1.6E-6 T 21-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VFU_RS21740 e8c828af34a06d9ec423036de11fe40a 460 Pfam PF07690 Major Facilitator Superfamily 25 289 2.6E-11 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VFU_RS21740 e8c828af34a06d9ec423036de11fe40a 460 Gene3D G3DSA:1.20.1250.20 200 394 6.8E-10 T 21-04-2016 VFU_RS04590 e09c34c1167ed106fac59291018a9dd7 112 PANTHER PTHR34182 2 112 9.9E-32 T 21-04-2016 VFU_RS04590 e09c34c1167ed106fac59291018a9dd7 112 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 1.2E-45 T 21-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VFU_RS04590 e09c34c1167ed106fac59291018a9dd7 112 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 1.2E-45 T 21-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VFU_RS04590 e09c34c1167ed106fac59291018a9dd7 112 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 1.2E-45 T 21-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VFU_RS04590 e09c34c1167ed106fac59291018a9dd7 112 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 1.2E-45 T 21-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VFU_RS04590 e09c34c1167ed106fac59291018a9dd7 112 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 2.3E-26 T 21-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VFU_RS04590 e09c34c1167ed106fac59291018a9dd7 112 Pfam PF03840 Preprotein translocase SecG subunit 4 72 1.9E-22 T 21-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VFU_RS10975 54aad3c6eb7f4efd7a0df2fc5253d46d 568 PANTHER PTHR30046:SF0 545 568 2.4E-122 T 21-04-2016 VFU_RS10975 54aad3c6eb7f4efd7a0df2fc5253d46d 568 PANTHER PTHR30046:SF0 13 522 2.4E-122 T 21-04-2016 VFU_RS10975 54aad3c6eb7f4efd7a0df2fc5253d46d 568 PANTHER PTHR30046 545 568 2.4E-122 T 21-04-2016 VFU_RS10975 54aad3c6eb7f4efd7a0df2fc5253d46d 568 PANTHER PTHR30046 13 522 2.4E-122 T 21-04-2016 VFU_RS10975 54aad3c6eb7f4efd7a0df2fc5253d46d 568 Pfam PF08345 Flagellar M-ring protein C-terminal 267 419 4.0E-39 T 21-04-2016 IPR013556 Flagellar M-ring C-terminal VFU_RS10975 54aad3c6eb7f4efd7a0df2fc5253d46d 568 PIRSF PIRSF004862 14 568 2.7E-121 T 21-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VFU_RS10975 54aad3c6eb7f4efd7a0df2fc5253d46d 568 PRINTS PR01009 Flagellar M-ring protein signature 209 227 2.9E-27 T 21-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VFU_RS10975 54aad3c6eb7f4efd7a0df2fc5253d46d 568 PRINTS PR01009 Flagellar M-ring protein signature 350 374 2.9E-27 T 21-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VFU_RS10975 54aad3c6eb7f4efd7a0df2fc5253d46d 568 PRINTS PR01009 Flagellar M-ring protein signature 133 151 2.9E-27 T 21-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VFU_RS10975 54aad3c6eb7f4efd7a0df2fc5253d46d 568 PRINTS PR01009 Flagellar M-ring protein signature 165 179 2.9E-27 T 21-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VFU_RS10975 54aad3c6eb7f4efd7a0df2fc5253d46d 568 PRINTS PR01009 Flagellar M-ring protein signature 280 298 2.9E-27 T 21-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VFU_RS10975 54aad3c6eb7f4efd7a0df2fc5253d46d 568 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 26 567 8.9E-83 T 21-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VFU_RS10975 54aad3c6eb7f4efd7a0df2fc5253d46d 568 Pfam PF01514 Secretory protein of YscJ/FliF family 43 233 5.2E-63 T 21-04-2016 IPR006182 Secretory protein YscJ/FliF VFU_RS04095 7386ac2bc103e5c38d684d222a742a49 597 Gene3D G3DSA:3.30.70.240 401 489 1.4E-20 T 21-04-2016 IPR000640 Translation elongation factor EFG, V domain VFU_RS04095 7386ac2bc103e5c38d684d222a742a49 597 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 6.0E-53 T 21-04-2016 VFU_RS04095 7386ac2bc103e5c38d684d222a742a49 597 PANTHER PTHR23115 397 595 5.1E-278 T 21-04-2016 VFU_RS04095 7386ac2bc103e5c38d684d222a742a49 597 PANTHER PTHR23115 2 373 5.1E-278 T 21-04-2016 VFU_RS04095 7386ac2bc103e5c38d684d222a742a49 597 Pfam PF03144 Elongation factor Tu domain 2 205 275 6.0E-10 T 21-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 VFU_RS04095 7386ac2bc103e5c38d684d222a742a49 597 PANTHER PTHR23115:SF175 397 595 5.1E-278 T 21-04-2016 VFU_RS04095 7386ac2bc103e5c38d684d222a742a49 597 PANTHER PTHR23115:SF175 2 373 5.1E-278 T 21-04-2016 VFU_RS04095 7386ac2bc103e5c38d684d222a742a49 597 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 1.3E-48 T 21-04-2016 IPR013842 GTP-binding protein LepA, C-terminal VFU_RS04095 7386ac2bc103e5c38d684d222a742a49 597 SUPERFAMILY SSF54980 292 370 1.55E-18 T 21-04-2016 IPR009022 Elongation factor G, III-V domain VFU_RS04095 7386ac2bc103e5c38d684d222a742a49 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 3.8E-14 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VFU_RS04095 7386ac2bc103e5c38d684d222a742a49 597 PRINTS PR00315 GTP-binding elongation factor signature 49 57 3.8E-14 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VFU_RS04095 7386ac2bc103e5c38d684d222a742a49 597 PRINTS PR00315 GTP-binding elongation factor signature 6 19 3.8E-14 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VFU_RS04095 7386ac2bc103e5c38d684d222a742a49 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 3.8E-14 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VFU_RS04095 7386ac2bc103e5c38d684d222a742a49 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 3.8E-14 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VFU_RS04095 7386ac2bc103e5c38d684d222a742a49 597 SUPERFAMILY SSF52540 2 233 3.19E-56 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS04095 7386ac2bc103e5c38d684d222a742a49 597 Gene3D G3DSA:2.40.30.10 193 289 5.2E-24 T 21-04-2016 VFU_RS04095 7386ac2bc103e5c38d684d222a742a49 597 Pfam PF00679 Elongation factor G C-terminus 399 482 1.5E-19 T 21-04-2016 IPR000640 Translation elongation factor EFG, V domain VFU_RS04095 7386ac2bc103e5c38d684d222a742a49 597 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 4.0E-300 T 21-04-2016 IPR006297 Elongation factor 4 GO:0005525 VFU_RS04095 7386ac2bc103e5c38d684d222a742a49 597 SMART SM00838 398 486 0.0095 T 21-04-2016 IPR000640 Translation elongation factor EFG, V domain VFU_RS04095 7386ac2bc103e5c38d684d222a742a49 597 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 21-04-2016 IPR031157 Tr-type G domain, conserved site VFU_RS04095 7386ac2bc103e5c38d684d222a742a49 597 Gene3D G3DSA:3.40.50.300 2 192 3.9E-61 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS04095 7386ac2bc103e5c38d684d222a742a49 597 SUPERFAMILY SSF54980 399 493 3.79E-24 T 21-04-2016 IPR009022 Elongation factor G, III-V domain VFU_RS04095 7386ac2bc103e5c38d684d222a742a49 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 306.187 T 21-04-2016 IPR006297 Elongation factor 4 GO:0005525 VFU_RS04095 7386ac2bc103e5c38d684d222a742a49 597 Gene3D G3DSA:3.30.70.870 291 369 8.9E-26 T 21-04-2016 VFU_RS04095 7386ac2bc103e5c38d684d222a742a49 597 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 176 7.1E-17 T 21-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VFU_RS06595 964f67cdb7e8826b775a3086b2423167 407 Pfam PF00480 ROK family 88 392 1.9E-68 T 21-04-2016 IPR000600 ROK family VFU_RS06595 964f67cdb7e8826b775a3086b2423167 407 Gene3D G3DSA:3.30.420.40 84 222 2.5E-33 T 21-04-2016 VFU_RS06595 964f67cdb7e8826b775a3086b2423167 407 SUPERFAMILY SSF46785 10 77 1.58E-16 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS06595 964f67cdb7e8826b775a3086b2423167 407 PANTHER PTHR18964:SF128 65 272 1.4E-182 T 21-04-2016 VFU_RS06595 964f67cdb7e8826b775a3086b2423167 407 PANTHER PTHR18964:SF128 307 404 1.4E-182 T 21-04-2016 VFU_RS06595 964f67cdb7e8826b775a3086b2423167 407 PANTHER PTHR18964 65 272 1.4E-182 T 21-04-2016 VFU_RS06595 964f67cdb7e8826b775a3086b2423167 407 PANTHER PTHR18964 307 404 1.4E-182 T 21-04-2016 VFU_RS06595 964f67cdb7e8826b775a3086b2423167 407 Gene3D G3DSA:1.10.10.10 11 80 1.2E-27 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS06595 964f67cdb7e8826b775a3086b2423167 407 SUPERFAMILY SSF53067 86 395 1.83E-55 T 21-04-2016 VFU_RS06595 964f67cdb7e8826b775a3086b2423167 407 ProSitePatterns PS01125 ROK family signature. 218 245 - T 21-04-2016 IPR000600 ROK family VFU_RS06595 964f67cdb7e8826b775a3086b2423167 407 Gene3D G3DSA:3.30.420.40 223 377 9.1E-54 T 21-04-2016 VFU_RS05210 8bbe8a018181255da27b8bd8e361d57a 369 PIRSF PIRSF001259 3 369 3.0E-127 T 21-04-2016 VFU_RS05210 8bbe8a018181255da27b8bd8e361d57a 369 Pfam PF00925 GTP cyclohydrolase II 207 367 8.9E-39 T 21-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 VFU_RS05210 8bbe8a018181255da27b8bd8e361d57a 369 PANTHER PTHR21327 7 367 6.1E-150 T 21-04-2016 VFU_RS05210 8bbe8a018181255da27b8bd8e361d57a 369 SUPERFAMILY SSF142695 205 367 6.8E-46 T 21-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 VFU_RS05210 8bbe8a018181255da27b8bd8e361d57a 369 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 37.873 T 21-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VFU_RS05210 8bbe8a018181255da27b8bd8e361d57a 369 SUPERFAMILY SSF55821 3 202 3.43E-85 T 21-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain VFU_RS05210 8bbe8a018181255da27b8bd8e361d57a 369 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 5.1E-83 T 21-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VFU_RS05210 8bbe8a018181255da27b8bd8e361d57a 369 Gene3D G3DSA:3.90.870.10 2 211 6.0E-99 T 21-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain VFU_RS05210 8bbe8a018181255da27b8bd8e361d57a 369 PANTHER PTHR21327:SF6 7 367 6.1E-150 T 21-04-2016 VFU_RS05210 8bbe8a018181255da27b8bd8e361d57a 369 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 7 199 2.1E-74 T 21-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VFU_RS14760 6618ca295b341e08c9b69bc0a73dde68 161 Gene3D G3DSA:3.90.960.10 5 159 2.0E-38 T 21-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VFU_RS14760 6618ca295b341e08c9b69bc0a73dde68 161 Pfam PF04073 Aminoacyl-tRNA editing domain 35 149 3.5E-23 T 21-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VFU_RS14760 6618ca295b341e08c9b69bc0a73dde68 161 SUPERFAMILY SSF55826 7 155 9.55E-34 T 21-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VFU_RS05405 fcba9fe928d71d79abbde666702704f3 212 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 3 192 2.1E-76 T 21-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 VFU_RS05405 fcba9fe928d71d79abbde666702704f3 212 Pfam PF00551 Formyl transferase 3 182 9.2E-63 T 21-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VFU_RS05405 fcba9fe928d71d79abbde666702704f3 212 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 31.248 T 21-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 VFU_RS05405 fcba9fe928d71d79abbde666702704f3 212 Gene3D G3DSA:3.40.50.170 2 195 2.7E-70 T 21-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VFU_RS05405 fcba9fe928d71d79abbde666702704f3 212 SUPERFAMILY SSF53328 4 199 1.7E-64 T 21-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VFU_RS05405 fcba9fe928d71d79abbde666702704f3 212 PANTHER PTHR10520 1 194 8.8E-102 T 21-04-2016 VFU_RS05405 fcba9fe928d71d79abbde666702704f3 212 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 21-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VFU_RS01005 591801c099c8b7550e6bc7ac00def52f 650 Gene3D G3DSA:1.10.287.950 402 619 7.4E-54 T 21-04-2016 VFU_RS01005 591801c099c8b7550e6bc7ac00def52f 650 SMART SM00304 318 372 5.4E-5 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS01005 591801c099c8b7550e6bc7ac00def52f 650 SMART SM00283 387 648 9.4E-61 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VFU_RS01005 591801c099c8b7550e6bc7ac00def52f 650 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 434 647 8.9E-44 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VFU_RS01005 591801c099c8b7550e6bc7ac00def52f 650 PANTHER PTHR32089 243 650 3.5E-95 T 21-04-2016 VFU_RS01005 591801c099c8b7550e6bc7ac00def52f 650 SUPERFAMILY SSF58104 348 649 2.88E-69 T 21-04-2016 VFU_RS01005 591801c099c8b7550e6bc7ac00def52f 650 SMART SM01358 37 289 2.8E-23 T 21-04-2016 IPR032255 Helical bimodular sensor domain VFU_RS01005 591801c099c8b7550e6bc7ac00def52f 650 Pfam PF00672 HAMP domain 300 368 6.7E-11 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS01005 591801c099c8b7550e6bc7ac00def52f 650 PANTHER PTHR32089:SF64 243 650 3.5E-95 T 21-04-2016 VFU_RS02720 f6072e8ee5170eb3bb8e5433a16db8ea 228 PANTHER PTHR12029 4 189 6.7E-72 T 21-04-2016 VFU_RS02720 f6072e8ee5170eb3bb8e5433a16db8ea 228 Pfam PF12105 SpoU, rRNA methylase, C-terminal 163 218 1.4E-23 T 21-04-2016 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 VFU_RS02720 f6072e8ee5170eb3bb8e5433a16db8ea 228 Gene3D G3DSA:3.40.1280.10 2 175 2.8E-48 T 21-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VFU_RS02720 f6072e8ee5170eb3bb8e5433a16db8ea 228 PANTHER PTHR12029:SF45 4 189 6.7E-72 T 21-04-2016 VFU_RS02720 f6072e8ee5170eb3bb8e5433a16db8ea 228 SUPERFAMILY SSF75217 5 174 5.69E-49 T 21-04-2016 IPR029028 Alpha/beta knot methyltransferases VFU_RS02720 f6072e8ee5170eb3bb8e5433a16db8ea 228 Pfam PF00588 SpoU rRNA Methylase family 20 159 2.5E-35 T 21-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VFU_RS05805 e62646ac937668db8f3436639d7aa7c1 228 SUPERFAMILY SSF55166 21 175 2.28E-18 T 21-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain VFU_RS05805 e62646ac937668db8f3436639d7aa7c1 228 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 25 178 1.6E-33 T 21-04-2016 IPR003709 Peptidase M15B GO:0006508|GO:0008233 VFU_RS05805 e62646ac937668db8f3436639d7aa7c1 228 PANTHER PTHR34385:SF1 1 69 1.5E-49 T 21-04-2016 VFU_RS05805 e62646ac937668db8f3436639d7aa7c1 228 PANTHER PTHR34385:SF1 88 220 1.5E-49 T 21-04-2016 VFU_RS05805 e62646ac937668db8f3436639d7aa7c1 228 PANTHER PTHR34385 1 69 1.5E-49 T 21-04-2016 VFU_RS05805 e62646ac937668db8f3436639d7aa7c1 228 PANTHER PTHR34385 88 220 1.5E-49 T 21-04-2016 VFU_RS09060 418d6739c95bd50f2f20b1bf71d1f13b 282 PANTHER PTHR10459:SF61 44 279 7.7E-73 T 21-04-2016 VFU_RS09060 418d6739c95bd50f2f20b1bf71d1f13b 282 Gene3D G3DSA:2.40.50.140 186 279 3.2E-37 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS09060 418d6739c95bd50f2f20b1bf71d1f13b 282 SUPERFAMILY SSF50249 173 279 3.43E-32 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS09060 418d6739c95bd50f2f20b1bf71d1f13b 282 SUPERFAMILY SSF56091 24 200 3.17E-36 T 21-04-2016 VFU_RS09060 418d6739c95bd50f2f20b1bf71d1f13b 282 Pfam PF01068 ATP dependent DNA ligase domain 115 200 2.8E-6 T 21-04-2016 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Reactome: REACT_216 VFU_RS09060 418d6739c95bd50f2f20b1bf71d1f13b 282 Pfam PF14743 DNA ligase OB-like domain 215 279 9.4E-31 T 21-04-2016 IPR029319 DNA ligase, OB-like domain VFU_RS09060 418d6739c95bd50f2f20b1bf71d1f13b 282 Gene3D G3DSA:3.30.1490.70 45 52 1.1E-7 T 21-04-2016 VFU_RS09060 418d6739c95bd50f2f20b1bf71d1f13b 282 Gene3D G3DSA:3.30.1490.70 153 185 1.1E-7 T 21-04-2016 VFU_RS09060 418d6739c95bd50f2f20b1bf71d1f13b 282 ProSitePatterns PS00333 ATP-dependent DNA ligase signature 2. 177 200 - T 21-04-2016 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 Reactome: REACT_216 VFU_RS09060 418d6739c95bd50f2f20b1bf71d1f13b 282 PANTHER PTHR10459 44 279 7.7E-73 T 21-04-2016 VFU_RS12535 60170f2ba6e9b5f8e3248280e3c2b596 193 Hamap MF_00459 Electron transport complex subunit RsxA [rsxA]. 2 191 26.345 T 21-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 VFU_RS12535 60170f2ba6e9b5f8e3248280e3c2b596 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 1.8E-90 T 21-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 VFU_RS12535 60170f2ba6e9b5f8e3248280e3c2b596 193 PANTHER PTHR30335:SF0 2 193 1.5E-134 T 21-04-2016 VFU_RS12535 60170f2ba6e9b5f8e3248280e3c2b596 193 PIRSF PIRSF006102 1 193 6.4E-65 T 21-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 VFU_RS12535 60170f2ba6e9b5f8e3248280e3c2b596 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 1.0E-61 T 21-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 VFU_RS12535 60170f2ba6e9b5f8e3248280e3c2b596 193 PANTHER PTHR30335 2 193 1.5E-134 T 21-04-2016 VFU_RS09970 4056f0d80c1d60d478761e77a6124f39 330 Pfam PF02769 AIR synthase related protein, C-terminal domain 158 301 3.4E-26 T 21-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VFU_RS09970 4056f0d80c1d60d478761e77a6124f39 330 SUPERFAMILY SSF56042 154 325 4.78E-43 T 21-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VFU_RS09970 4056f0d80c1d60d478761e77a6124f39 330 Gene3D G3DSA:3.30.1330.10 17 149 4.4E-18 T 21-04-2016 IPR016188 PurM-like, N-terminal domain VFU_RS09970 4056f0d80c1d60d478761e77a6124f39 330 Pfam PF00586 AIR synthase related protein, N-terminal domain 36 146 7.5E-14 T 21-04-2016 IPR016188 PurM-like, N-terminal domain VFU_RS09970 4056f0d80c1d60d478761e77a6124f39 330 PANTHER PTHR30303:SF0 1 330 5.8E-137 T 21-04-2016 VFU_RS09970 4056f0d80c1d60d478761e77a6124f39 330 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 3 330 1.7E-127 T 21-04-2016 IPR011854 Hydrogenase expression/formation protein HypE VFU_RS09970 4056f0d80c1d60d478761e77a6124f39 330 Gene3D G3DSA:3.90.650.10 157 316 2.7E-22 T 21-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VFU_RS09970 4056f0d80c1d60d478761e77a6124f39 330 SUPERFAMILY SSF55326 2 147 6.98E-28 T 21-04-2016 VFU_RS09970 4056f0d80c1d60d478761e77a6124f39 330 PIRSF PIRSF005644 1 330 4.1E-118 T 21-04-2016 IPR011854 Hydrogenase expression/formation protein HypE VFU_RS09970 4056f0d80c1d60d478761e77a6124f39 330 PANTHER PTHR30303 1 330 5.8E-137 T 21-04-2016 VFU_RS09665 d7db8e511d7f5cf595d4dcc7810e3db3 158 Gene3D G3DSA:2.40.160.20 6 157 2.0E-20 T 21-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VFU_RS09665 d7db8e511d7f5cf595d4dcc7810e3db3 158 SUPERFAMILY SSF56925 18 157 5.49E-22 T 21-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VFU_RS09665 d7db8e511d7f5cf595d4dcc7810e3db3 158 Pfam PF13505 Outer membrane protein beta-barrel domain 6 157 1.6E-18 T 21-04-2016 IPR027385 Outer membrane protein beta-barrel VFU_RS08475 f48bf915e9a6319b3e9c988db931132d 438 PIRSF PIRSF006066 12 438 2.9E-70 T 21-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 VFU_RS08475 f48bf915e9a6319b3e9c988db931132d 438 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 27 436 1.0E-86 T 21-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 VFU_RS08475 f48bf915e9a6319b3e9c988db931132d 438 PANTHER PTHR33362 1 436 4.7E-89 T 21-04-2016 VFU_RS08475 f48bf915e9a6319b3e9c988db931132d 438 PANTHER PTHR33362:SF7 1 436 4.7E-89 T 21-04-2016 VFU_RS08475 f48bf915e9a6319b3e9c988db931132d 438 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 18 433 6.1E-80 T 21-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VFU_RS12375 afb0713d41d1420e5f054fb1d603aded 291 Pfam PF03466 LysR substrate binding domain 88 286 2.3E-39 T 21-04-2016 IPR005119 LysR, substrate-binding VFU_RS12375 afb0713d41d1420e5f054fb1d603aded 291 SUPERFAMILY SSF53850 88 288 1.02E-36 T 21-04-2016 VFU_RS12375 afb0713d41d1420e5f054fb1d603aded 291 Gene3D G3DSA:3.40.190.10 177 257 3.3E-16 T 21-04-2016 VFU_RS12375 afb0713d41d1420e5f054fb1d603aded 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.3E-13 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS12375 afb0713d41d1420e5f054fb1d603aded 291 Gene3D G3DSA:1.10.10.10 1 82 5.4E-20 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS12375 afb0713d41d1420e5f054fb1d603aded 291 PANTHER PTHR30537 1 286 1.6E-168 T 21-04-2016 VFU_RS12375 afb0713d41d1420e5f054fb1d603aded 291 SUPERFAMILY SSF46785 1 84 1.01E-16 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS12375 afb0713d41d1420e5f054fb1d603aded 291 Gene3D G3DSA:3.40.190.10 91 176 4.8E-22 T 21-04-2016 VFU_RS12375 afb0713d41d1420e5f054fb1d603aded 291 PANTHER PTHR30537:SF19 1 286 1.6E-168 T 21-04-2016 VFU_RS06110 2c42ff6e4e7e2e6dbebc31399ef73ef4 252 Gene3D G3DSA:3.40.1390.30 1 107 7.6E-39 T 21-04-2016 VFU_RS06110 2c42ff6e4e7e2e6dbebc31399ef73ef4 252 Gene3D G3DSA:3.40.1390.30 108 219 4.4E-29 T 21-04-2016 VFU_RS06110 2c42ff6e4e7e2e6dbebc31399ef73ef4 252 PANTHER PTHR13799 1 248 2.4E-80 T 21-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 VFU_RS06110 2c42ff6e4e7e2e6dbebc31399ef73ef4 252 SUPERFAMILY SSF102705 1 251 1.83E-82 T 21-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 VFU_RS06110 2c42ff6e4e7e2e6dbebc31399ef73ef4 252 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 8 238 7.8E-61 T 21-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 VFU_RS06110 2c42ff6e4e7e2e6dbebc31399ef73ef4 252 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 251 3.0E-69 T 21-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 VFU_RS06655 0e0c6c69e11d1dbaaf285ffbb51ca979 404 SUPERFAMILY SSF53383 5 400 3.13E-94 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VFU_RS06655 0e0c6c69e11d1dbaaf285ffbb51ca979 404 PANTHER PTHR11751:SF303 9 399 9.0E-193 T 21-04-2016 VFU_RS06655 0e0c6c69e11d1dbaaf285ffbb51ca979 404 Pfam PF00155 Aminotransferase class I and II 61 390 8.3E-48 T 21-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VFU_RS06655 0e0c6c69e11d1dbaaf285ffbb51ca979 404 PANTHER PTHR11751 9 399 9.0E-193 T 21-04-2016 VFU_RS06655 0e0c6c69e11d1dbaaf285ffbb51ca979 404 Gene3D G3DSA:3.90.1150.10 280 403 3.1E-41 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VFU_RS06655 0e0c6c69e11d1dbaaf285ffbb51ca979 404 Gene3D G3DSA:3.40.640.10 51 279 3.2E-67 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VFU_RS01080 151b72e90e9ce769cb6277e02529c4ab 146 Gene3D G3DSA:3.30.420.10 3 144 1.3E-41 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VFU_RS01080 151b72e90e9ce769cb6277e02529c4ab 146 Pfam PF00075 RNase H 3 144 1.1E-33 T 21-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 VFU_RS01080 151b72e90e9ce769cb6277e02529c4ab 146 SUPERFAMILY SSF53098 3 144 8.98E-39 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VFU_RS01080 151b72e90e9ce769cb6277e02529c4ab 146 PANTHER PTHR10642 2 145 2.6E-40 T 21-04-2016 VFU_RS10875 ff227e2ca670a0e49f294ee2a487c632 640 PANTHER PTHR32089 262 640 2.6E-121 T 21-04-2016 VFU_RS10875 ff227e2ca670a0e49f294ee2a487c632 640 SMART SM00304 309 363 2.3E-7 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS10875 ff227e2ca670a0e49f294ee2a487c632 640 SMART SM00283 378 639 6.4E-62 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VFU_RS10875 ff227e2ca670a0e49f294ee2a487c632 640 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 439 638 2.5E-45 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VFU_RS10875 ff227e2ca670a0e49f294ee2a487c632 640 Gene3D G3DSA:3.30.450.20 149 283 4.1E-11 T 21-04-2016 VFU_RS10875 ff227e2ca670a0e49f294ee2a487c632 640 Pfam PF00672 HAMP domain 290 359 1.1E-12 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS10875 ff227e2ca670a0e49f294ee2a487c632 640 Gene3D G3DSA:1.10.287.950 396 609 5.6E-54 T 21-04-2016 VFU_RS10875 ff227e2ca670a0e49f294ee2a487c632 640 SUPERFAMILY SSF58104 331 640 2.75E-71 T 21-04-2016 VFU_RS10875 ff227e2ca670a0e49f294ee2a487c632 640 Pfam PF02743 Cache domain 84 271 1.7E-13 T 21-04-2016 IPR033479 Double Cache domain 1 VFU_RS10875 ff227e2ca670a0e49f294ee2a487c632 640 PANTHER PTHR32089:SF55 262 640 2.6E-121 T 21-04-2016 VFU_RS12820 9b371668a02bafeb97178ef0f85b5661 154 PANTHER PTHR22881 1 153 4.6E-65 T 21-04-2016 VFU_RS12820 9b371668a02bafeb97178ef0f85b5661 154 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 39 143 5.8E-37 T 21-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 VFU_RS12820 9b371668a02bafeb97178ef0f85b5661 154 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 113 123 - T 21-04-2016 IPR020549 Endoribonuclease YbeY, conserved site VFU_RS12820 9b371668a02bafeb97178ef0f85b5661 154 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 147 23.98 T 21-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 VFU_RS12820 9b371668a02bafeb97178ef0f85b5661 154 Pfam PF02130 Uncharacterized protein family UPF0054 20 142 7.6E-38 T 21-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 VFU_RS12820 9b371668a02bafeb97178ef0f85b5661 154 Gene3D G3DSA:3.40.390.30 14 151 1.3E-49 T 21-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 VFU_RS12820 9b371668a02bafeb97178ef0f85b5661 154 SUPERFAMILY SSF55486 5 149 7.32E-49 T 21-04-2016 VFU_RS09135 b49018e064726bd9b08cfeb790616706 236 Gene3D G3DSA:3.40.50.300 3 232 6.9E-51 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS09135 b49018e064726bd9b08cfeb790616706 236 PANTHER PTHR24220:SF542 6 227 2.7E-132 T 21-04-2016 VFU_RS09135 b49018e064726bd9b08cfeb790616706 236 Pfam PF00005 ABC transporter 25 164 2.0E-28 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS09135 b49018e064726bd9b08cfeb790616706 236 SUPERFAMILY SSF52540 5 216 4.3E-49 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS09135 b49018e064726bd9b08cfeb790616706 236 SMART SM00382 29 201 6.6E-9 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS09135 b49018e064726bd9b08cfeb790616706 236 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS09135 b49018e064726bd9b08cfeb790616706 236 PANTHER PTHR24220 6 227 2.7E-132 T 21-04-2016 VFU_RS09200 2d6e189a38b9ab4b06f038592fa9a63e 951 Gene3D G3DSA:3.40.50.740 118 225 2.8E-67 T 21-04-2016 VFU_RS09200 2d6e189a38b9ab4b06f038592fa9a63e 951 Gene3D G3DSA:3.40.50.740 447 582 2.8E-67 T 21-04-2016 VFU_RS09200 2d6e189a38b9ab4b06f038592fa9a63e 951 Gene3D G3DSA:3.40.228.10 343 384 2.5E-30 T 21-04-2016 VFU_RS09200 2d6e189a38b9ab4b06f038592fa9a63e 951 Gene3D G3DSA:3.40.228.10 226 296 2.5E-30 T 21-04-2016 VFU_RS09200 2d6e189a38b9ab4b06f038592fa9a63e 951 PANTHER PTHR11615 406 599 0.0 T 21-04-2016 VFU_RS09200 2d6e189a38b9ab4b06f038592fa9a63e 951 PANTHER PTHR11615 10 382 0.0 T 21-04-2016 VFU_RS09200 2d6e189a38b9ab4b06f038592fa9a63e 951 PANTHER PTHR11615 731 951 0.0 T 21-04-2016 VFU_RS09200 2d6e189a38b9ab4b06f038592fa9a63e 951 Pfam PF00384 Molybdopterin oxidoreductase 118 568 1.7E-53 T 21-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 VFU_RS09200 2d6e189a38b9ab4b06f038592fa9a63e 951 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 19 45 1.3E-4 T 21-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VFU_RS09200 2d6e189a38b9ab4b06f038592fa9a63e 951 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 66 83 - T 21-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 VFU_RS09200 2d6e189a38b9ab4b06f038592fa9a63e 951 SUPERFAMILY SSF50692 752 782 1.02E-38 T 21-04-2016 IPR009010 Aspartate decarboxylase-like domain VFU_RS09200 2d6e189a38b9ab4b06f038592fa9a63e 951 SUPERFAMILY SSF50692 813 951 1.02E-38 T 21-04-2016 IPR009010 Aspartate decarboxylase-like domain VFU_RS09200 2d6e189a38b9ab4b06f038592fa9a63e 951 Gene3D G3DSA:2.20.25.90 58 115 5.2E-18 T 21-04-2016 VFU_RS09200 2d6e189a38b9ab4b06f038592fa9a63e 951 SUPERFAMILY SSF53706 59 646 1.96E-198 T 21-04-2016 VFU_RS09200 2d6e189a38b9ab4b06f038592fa9a63e 951 SMART SM00926 61 115 3.9E-16 T 21-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 VFU_RS09200 2d6e189a38b9ab4b06f038592fa9a63e 951 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 62 112 1.8E-11 T 21-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 VFU_RS09200 2d6e189a38b9ab4b06f038592fa9a63e 951 Gene3D G3DSA:2.40.40.20 768 779 5.5E-56 T 21-04-2016 VFU_RS09200 2d6e189a38b9ab4b06f038592fa9a63e 951 Gene3D G3DSA:2.40.40.20 812 951 5.5E-56 T 21-04-2016 VFU_RS09200 2d6e189a38b9ab4b06f038592fa9a63e 951 Gene3D G3DSA:2.40.40.20 641 674 5.5E-56 T 21-04-2016 VFU_RS09200 2d6e189a38b9ab4b06f038592fa9a63e 951 PANTHER PTHR11615:SF140 406 599 0.0 T 21-04-2016 VFU_RS09200 2d6e189a38b9ab4b06f038592fa9a63e 951 PANTHER PTHR11615:SF140 10 382 0.0 T 21-04-2016 VFU_RS09200 2d6e189a38b9ab4b06f038592fa9a63e 951 PANTHER PTHR11615:SF140 731 951 0.0 T 21-04-2016 VFU_RS09200 2d6e189a38b9ab4b06f038592fa9a63e 951 Pfam PF01568 Molydopterin dinucleotide binding domain 818 944 2.4E-20 T 21-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 VFU_RS00945 9ea80c89b43d7f4b8e7a61387a8c3d9a 490 PANTHER PTHR30097:SF3 40 412 2.9E-88 T 21-04-2016 VFU_RS00945 9ea80c89b43d7f4b8e7a61387a8c3d9a 490 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 112 320 1.4E-76 T 21-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VFU_RS00945 9ea80c89b43d7f4b8e7a61387a8c3d9a 490 Pfam PF11604 Copper binding periplasmic protein CusF 419 484 1.6E-18 T 21-04-2016 IPR021647 Copper binding periplasmic protein CusF VFU_RS00945 9ea80c89b43d7f4b8e7a61387a8c3d9a 490 PANTHER PTHR30097 40 412 2.9E-88 T 21-04-2016 VFU_RS00945 9ea80c89b43d7f4b8e7a61387a8c3d9a 490 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 216 393 1.4E-30 T 21-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 VFU_RS00945 9ea80c89b43d7f4b8e7a61387a8c3d9a 490 SUPERFAMILY SSF111369 128 325 8.89E-16 T 21-04-2016 VFU_RS00945 9ea80c89b43d7f4b8e7a61387a8c3d9a 490 Gene3D G3DSA:2.40.50.100 214 245 5.0E-11 T 21-04-2016 VFU_RS00945 9ea80c89b43d7f4b8e7a61387a8c3d9a 490 Gene3D G3DSA:2.40.50.100 131 163 5.0E-11 T 21-04-2016 VFU_RS14555 cffb2b2c84d94d16fa42759e4e19106c 201 Pfam PF02660 Glycerol-3-phosphate acyltransferase 12 184 3.2E-51 T 21-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 VFU_RS14555 cffb2b2c84d94d16fa42759e4e19106c 201 PANTHER PTHR30309:SF0 1 196 7.4E-93 T 21-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 VFU_RS14555 cffb2b2c84d94d16fa42759e4e19106c 201 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 19.249 T 21-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 VFU_RS14555 cffb2b2c84d94d16fa42759e4e19106c 201 SMART SM01207 10 185 7.1E-84 T 21-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 VFU_RS14555 cffb2b2c84d94d16fa42759e4e19106c 201 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 2 194 9.8E-75 T 21-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 VFU_RS14555 cffb2b2c84d94d16fa42759e4e19106c 201 PANTHER PTHR30309 1 196 7.4E-93 T 21-04-2016 VFU_RS03155 c39d8ef6a198b151c777163e1afef24c 226 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 4 223 34.751 T 21-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 VFU_RS03155 c39d8ef6a198b151c777163e1afef24c 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 155 175 1.7E-9 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 VFU_RS03155 c39d8ef6a198b151c777163e1afef24c 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 1.7E-9 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 VFU_RS03155 c39d8ef6a198b151c777163e1afef24c 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 1.7E-9 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 VFU_RS03155 c39d8ef6a198b151c777163e1afef24c 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 1.7E-9 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 VFU_RS03155 c39d8ef6a198b151c777163e1afef24c 226 Gene3D G3DSA:3.40.50.1000 2 23 3.4E-45 T 21-04-2016 IPR023214 HAD-like domain VFU_RS03155 c39d8ef6a198b151c777163e1afef24c 226 Gene3D G3DSA:3.40.50.1000 94 222 3.4E-45 T 21-04-2016 IPR023214 HAD-like domain VFU_RS03155 c39d8ef6a198b151c777163e1afef24c 226 PANTHER PTHR18901 3 222 1.8E-68 T 21-04-2016 VFU_RS03155 c39d8ef6a198b151c777163e1afef24c 226 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 85 191 4.0E-14 T 21-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA VFU_RS03155 c39d8ef6a198b151c777163e1afef24c 226 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 7 221 4.3E-58 T 21-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 VFU_RS03155 c39d8ef6a198b151c777163e1afef24c 226 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 98 187 1.5E-9 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 VFU_RS03155 c39d8ef6a198b151c777163e1afef24c 226 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 79 192 1.1E-11 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 VFU_RS03155 c39d8ef6a198b151c777163e1afef24c 226 Gene3D G3DSA:1.10.150.240 24 87 5.4E-21 T 21-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 VFU_RS03155 c39d8ef6a198b151c777163e1afef24c 226 SUPERFAMILY SSF56784 3 222 8.53E-59 T 21-04-2016 IPR023214 HAD-like domain VFU_RS03155 c39d8ef6a198b151c777163e1afef24c 226 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 191 1.1E-37 T 21-04-2016 IPR023214 HAD-like domain VFU_RS03155 c39d8ef6a198b151c777163e1afef24c 226 PANTHER PTHR18901:SF14 3 222 1.8E-68 T 21-04-2016 VFU_RS14480 3f8771ec22d6e36debdc84bfe9a0f1f0 156 Pfam PF02631 RecX family 35 149 6.5E-30 T 21-04-2016 IPR003783 Regulatory protein RecX GO:0006282 VFU_RS14480 3f8771ec22d6e36debdc84bfe9a0f1f0 156 Gene3D G3DSA:1.10.10.10 56 99 3.9E-19 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS14480 3f8771ec22d6e36debdc84bfe9a0f1f0 156 PANTHER PTHR33602:SF1 14 152 1.1E-40 T 21-04-2016 VFU_RS14480 3f8771ec22d6e36debdc84bfe9a0f1f0 156 Hamap MF_01114 Regulatory protein RecX [recX]. 1 154 14.149 T 21-04-2016 IPR003783 Regulatory protein RecX GO:0006282 VFU_RS14480 3f8771ec22d6e36debdc84bfe9a0f1f0 156 Gene3D G3DSA:1.10.10.10 102 152 1.2E-20 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS14480 3f8771ec22d6e36debdc84bfe9a0f1f0 156 PANTHER PTHR33602 14 152 1.1E-40 T 21-04-2016 VFU_RS14480 3f8771ec22d6e36debdc84bfe9a0f1f0 156 Gene3D G3DSA:1.10.10.10 10 55 4.6E-14 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS01285 1f5d93642999b9a009616f0434a04d24 571 SUPERFAMILY SSF52540 3 253 2.18E-66 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS01285 1f5d93642999b9a009616f0434a04d24 571 Gene3D G3DSA:3.40.50.300 2 255 7.8E-75 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS01285 1f5d93642999b9a009616f0434a04d24 571 ProSitePatterns PS00211 ABC transporters family signature. 455 469 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS01285 1f5d93642999b9a009616f0434a04d24 571 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS01285 1f5d93642999b9a009616f0434a04d24 571 SMART SM00382 338 534 1.3E-16 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS01285 1f5d93642999b9a009616f0434a04d24 571 SMART SM00382 32 231 7.9E-17 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS01285 1f5d93642999b9a009616f0434a04d24 571 PANTHER PTHR24220 5 293 2.5E-200 T 21-04-2016 VFU_RS01285 1f5d93642999b9a009616f0434a04d24 571 PANTHER PTHR24220 329 438 2.5E-200 T 21-04-2016 VFU_RS01285 1f5d93642999b9a009616f0434a04d24 571 Pfam PF00005 ABC transporter 24 181 1.4E-29 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS01285 1f5d93642999b9a009616f0434a04d24 571 Pfam PF00005 ABC transporter 330 483 9.5E-34 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS01285 1f5d93642999b9a009616f0434a04d24 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 265 9.9E-7 T 21-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VFU_RS01285 1f5d93642999b9a009616f0434a04d24 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 534 563 0.0014 T 21-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VFU_RS01285 1f5d93642999b9a009616f0434a04d24 571 SUPERFAMILY SSF52540 318 553 2.11E-72 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS01285 1f5d93642999b9a009616f0434a04d24 571 PANTHER PTHR24220:SF336 5 293 2.5E-200 T 21-04-2016 VFU_RS01285 1f5d93642999b9a009616f0434a04d24 571 PANTHER PTHR24220:SF336 329 438 2.5E-200 T 21-04-2016 VFU_RS01285 1f5d93642999b9a009616f0434a04d24 571 Gene3D G3DSA:3.40.50.300 294 559 1.1E-79 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS11290 f9a5a2b13b6823de269439d0cb80b143 326 Gene3D G3DSA:3.90.1640.10 17 190 7.1E-28 T 21-04-2016 VFU_RS11290 f9a5a2b13b6823de269439d0cb80b143 326 Pfam PF02272 DHHA1 domain 249 301 3.3E-5 T 21-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 VFU_RS11290 f9a5a2b13b6823de269439d0cb80b143 326 SUPERFAMILY SSF64182 17 302 1.26E-44 T 21-04-2016 VFU_RS11290 f9a5a2b13b6823de269439d0cb80b143 326 PANTHER PTHR13734 13 178 6.2E-14 T 21-04-2016 VFU_RS11290 f9a5a2b13b6823de269439d0cb80b143 326 PANTHER PTHR13734:SF42 13 178 6.2E-14 T 21-04-2016 VFU_RS11290 f9a5a2b13b6823de269439d0cb80b143 326 Pfam PF01368 DHH family 18 159 3.3E-13 T 21-04-2016 IPR001667 DDH domain VFU_RS00015 7a4ce7c035fd680e13be3ee71c54c1ad 156 SUPERFAMILY SSF47973 6 149 2.88E-60 T 21-04-2016 IPR023798 Ribosomal protein S7 domain VFU_RS00015 7a4ce7c035fd680e13be3ee71c54c1ad 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 21-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 VFU_RS00015 7a4ce7c035fd680e13be3ee71c54c1ad 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 2.8E-66 T 21-04-2016 IPR023798 Ribosomal protein S7 domain VFU_RS00015 7a4ce7c035fd680e13be3ee71c54c1ad 156 PANTHER PTHR11205 1 156 4.2E-94 T 21-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 VFU_RS00015 7a4ce7c035fd680e13be3ee71c54c1ad 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 36.025 T 21-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 VFU_RS00015 7a4ce7c035fd680e13be3ee71c54c1ad 156 PIRSF PIRSF002122 3 156 1.1E-63 T 21-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 VFU_RS00015 7a4ce7c035fd680e13be3ee71c54c1ad 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 9.5E-72 T 21-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 VFU_RS00015 7a4ce7c035fd680e13be3ee71c54c1ad 156 Gene3D G3DSA:1.10.455.10 8 156 2.9E-69 T 21-04-2016 IPR023798 Ribosomal protein S7 domain VFU_RS02405 a205b8cdc738831748d14a40b765ca57 120 PANTHER PTHR34299 1 119 7.3E-39 T 21-04-2016 VFU_RS02405 a205b8cdc738831748d14a40b765ca57 120 Pfam PF01219 Prokaryotic diacylglycerol kinase 17 115 3.3E-35 T 21-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 VFU_RS02405 a205b8cdc738831748d14a40b765ca57 120 Gene3D G3DSA:1.10.3830.10 4 118 1.2E-44 T 21-04-2016 VFU_RS02405 a205b8cdc738831748d14a40b765ca57 120 PANTHER PTHR34299:SF1 1 119 7.3E-39 T 21-04-2016 VFU_RS02405 a205b8cdc738831748d14a40b765ca57 120 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 71 82 - T 21-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 VFU_RS01135 6fff96df89edecc7b582a359ec0a1446 609 Pfam PF00005 ABC transporter 378 531 4.2E-35 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS01135 6fff96df89edecc7b582a359ec0a1446 609 PANTHER PTHR24221 2 609 0.0 T 21-04-2016 VFU_RS01135 6fff96df89edecc7b582a359ec0a1446 609 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS01135 6fff96df89edecc7b582a359ec0a1446 609 Gene3D G3DSA:3.40.50.300 361 596 3.0E-81 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS01135 6fff96df89edecc7b582a359ec0a1446 609 SMART SM00382 386 577 3.4E-22 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS01135 6fff96df89edecc7b582a359ec0a1446 609 Pfam PF00664 ABC transporter transmembrane region 41 310 1.3E-17 T 21-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VFU_RS01135 6fff96df89edecc7b582a359ec0a1446 609 SUPERFAMILY SSF52540 351 601 5.23E-89 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS01135 6fff96df89edecc7b582a359ec0a1446 609 PANTHER PTHR24221:SF203 2 609 0.0 T 21-04-2016 VFU_RS01135 6fff96df89edecc7b582a359ec0a1446 609 SUPERFAMILY SSF90123 22 325 6.8E-47 T 21-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VFU_RS01135 6fff96df89edecc7b582a359ec0a1446 609 SUPERFAMILY SSF90123 507 522 6.8E-47 T 21-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VFU_RS01135 6fff96df89edecc7b582a359ec0a1446 609 Gene3D G3DSA:1.20.1560.10 31 329 4.7E-33 T 21-04-2016 VFU_RS13200 4567fe4e4a6b683522ed20fb4c33aa60 281 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 6 278 3.9E-120 T 21-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 VFU_RS13200 4567fe4e4a6b683522ed20fb4c33aa60 281 Pfam PF00756 Putative esterase 23 273 4.6E-63 T 21-04-2016 IPR000801 Putative esterase VFU_RS13200 4567fe4e4a6b683522ed20fb4c33aa60 281 SUPERFAMILY SSF53474 3 280 1.19E-92 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold VFU_RS13200 4567fe4e4a6b683522ed20fb4c33aa60 281 Gene3D G3DSA:3.40.50.1820 5 280 2.2E-77 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold VFU_RS13200 4567fe4e4a6b683522ed20fb4c33aa60 281 PANTHER PTHR10061 2 281 1.1E-164 T 21-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 VFU_RS07100 a3b574150599b2315c3d8cd6b089fca0 149 Pfam PF13673 Acetyltransferase (GNAT) domain 24 119 6.5E-10 T 21-04-2016 IPR000182 GNAT domain GO:0008080 VFU_RS07100 a3b574150599b2315c3d8cd6b089fca0 149 Gene3D G3DSA:3.40.630.30 19 126 1.0E-21 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase VFU_RS07100 a3b574150599b2315c3d8cd6b089fca0 149 SUPERFAMILY SSF55729 13 147 9.09E-25 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase VFU_RS07100 a3b574150599b2315c3d8cd6b089fca0 149 PANTHER PTHR23091 1 127 6.9E-19 T 21-04-2016 VFU_RS07100 a3b574150599b2315c3d8cd6b089fca0 149 PANTHER PTHR23091:SF226 1 127 6.9E-19 T 21-04-2016 VFU_RS12685 11eb0add62d5689f4418fd5bb694a857 287 PANTHER PTHR26402:SF483 9 257 1.5E-68 T 21-04-2016 VFU_RS12685 11eb0add62d5689f4418fd5bb694a857 287 Pfam PF00486 Transcriptional regulatory protein, C terminal 31 107 3.2E-19 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VFU_RS12685 11eb0add62d5689f4418fd5bb694a857 287 SUPERFAMILY SSF46894 6 109 2.52E-18 T 21-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VFU_RS12685 11eb0add62d5689f4418fd5bb694a857 287 SMART SM00862 30 107 1.1E-16 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VFU_RS12685 11eb0add62d5689f4418fd5bb694a857 287 PANTHER PTHR26402 9 257 1.5E-68 T 21-04-2016 VFU_RS12685 11eb0add62d5689f4418fd5bb694a857 287 Gene3D G3DSA:1.10.10.10 9 110 9.7E-20 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS06710 9c654f816b9e37571f15e64edb26a260 291 Pfam PF04280 Tim44-like domain 169 290 3.3E-14 T 21-04-2016 IPR007379 Tim44-like domain VFU_RS06710 9c654f816b9e37571f15e64edb26a260 291 PANTHER PTHR41542:SF1 1 291 1.9E-82 T 21-04-2016 VFU_RS06710 9c654f816b9e37571f15e64edb26a260 291 PANTHER PTHR41542 1 291 1.9E-82 T 21-04-2016 VFU_RS06710 9c654f816b9e37571f15e64edb26a260 291 SUPERFAMILY SSF54427 170 290 9.2E-15 T 21-04-2016 IPR032710 NTF2-like domain VFU_RS06710 9c654f816b9e37571f15e64edb26a260 291 SMART SM00978 160 291 2.6E-30 T 21-04-2016 IPR007379 Tim44-like domain VFU_RS10820 68fd82074b35527070b69bca0330ba23 521 PRINTS PR00095 Anthranilate synthase component I signature 464 478 5.1E-23 T 21-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VFU_RS10820 68fd82074b35527070b69bca0330ba23 521 PRINTS PR00095 Anthranilate synthase component I signature 449 463 5.1E-23 T 21-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VFU_RS10820 68fd82074b35527070b69bca0330ba23 521 PRINTS PR00095 Anthranilate synthase component I signature 355 368 5.1E-23 T 21-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VFU_RS10820 68fd82074b35527070b69bca0330ba23 521 PRINTS PR00095 Anthranilate synthase component I signature 369 382 5.1E-23 T 21-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VFU_RS10820 68fd82074b35527070b69bca0330ba23 521 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 22 519 8.8E-228 T 21-04-2016 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VFU_RS10820 68fd82074b35527070b69bca0330ba23 521 Gene3D G3DSA:3.60.120.10 13 520 4.9E-160 T 21-04-2016 IPR005801 ADC synthase GO:0009058 VFU_RS10820 68fd82074b35527070b69bca0330ba23 521 PANTHER PTHR11236 13 518 7.6E-249 T 21-04-2016 VFU_RS10820 68fd82074b35527070b69bca0330ba23 521 Pfam PF00425 chorismate binding enzyme 247 507 6.1E-86 T 21-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal VFU_RS10820 68fd82074b35527070b69bca0330ba23 521 PIRSF PIRSF001373 3 521 9.0E-255 T 21-04-2016 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VFU_RS10820 68fd82074b35527070b69bca0330ba23 521 Pfam PF04715 Anthranilate synthase component I, N terminal region 24 197 2.3E-12 T 21-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VFU_RS10820 68fd82074b35527070b69bca0330ba23 521 SUPERFAMILY SSF56322 15 518 6.93E-161 T 21-04-2016 IPR005801 ADC synthase GO:0009058 VFU_RS10820 68fd82074b35527070b69bca0330ba23 521 PANTHER PTHR11236:SF22 13 518 7.6E-249 T 21-04-2016 VFU_RS11910 1b40d065c96c968ffad7730146328d59 754 Gene3D G3DSA:3.60.20.10 360 583 6.1E-58 T 21-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VFU_RS11910 1b40d065c96c968ffad7730146328d59 754 Gene3D G3DSA:3.60.20.10 171 278 6.1E-58 T 21-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VFU_RS11910 1b40d065c96c968ffad7730146328d59 754 Pfam PF01804 Penicillin amidase 8 741 7.1E-93 T 21-04-2016 IPR002692 Penicillin/cephalosporin acylase GO:0016787|GO:0017000 VFU_RS11910 1b40d065c96c968ffad7730146328d59 754 PANTHER PTHR34218 8 484 8.6E-74 T 21-04-2016 VFU_RS11910 1b40d065c96c968ffad7730146328d59 754 PANTHER PTHR34218 502 754 8.6E-74 T 21-04-2016 VFU_RS11910 1b40d065c96c968ffad7730146328d59 754 SUPERFAMILY SSF56235 7 158 1.03E-103 T 21-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VFU_RS11910 1b40d065c96c968ffad7730146328d59 754 SUPERFAMILY SSF56235 191 746 1.03E-103 T 21-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VFU_RS11910 1b40d065c96c968ffad7730146328d59 754 Gene3D G3DSA:2.30.120.10 285 335 1.0E-4 T 21-04-2016 VFU_RS11910 1b40d065c96c968ffad7730146328d59 754 Gene3D G3DSA:1.10.439.10 7 149 3.4E-35 T 21-04-2016 IPR023343 Penicillin amidase type, domain1 GO:0016811 VFU_RS11910 1b40d065c96c968ffad7730146328d59 754 PANTHER PTHR34218:SF3 8 484 8.6E-74 T 21-04-2016 VFU_RS11910 1b40d065c96c968ffad7730146328d59 754 PANTHER PTHR34218:SF3 502 754 8.6E-74 T 21-04-2016 VFU_RS01520 501c08fe3ea3aafc1678c916e941d86f 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 546 1.1E-207 T 21-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VFU_RS01520 501c08fe3ea3aafc1678c916e941d86f 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 188 322 1.7E-39 T 21-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 VFU_RS01520 501c08fe3ea3aafc1678c916e941d86f 548 SUPERFAMILY SSF52518 1 177 6.41E-61 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold VFU_RS01520 501c08fe3ea3aafc1678c916e941d86f 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 375 523 1.6E-47 T 21-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VFU_RS01520 501c08fe3ea3aafc1678c916e941d86f 548 PANTHER PTHR18968 1 546 4.2E-253 T 21-04-2016 VFU_RS01520 501c08fe3ea3aafc1678c916e941d86f 548 PANTHER PTHR18968:SF116 1 546 4.2E-253 T 21-04-2016 VFU_RS01520 501c08fe3ea3aafc1678c916e941d86f 548 Gene3D G3DSA:3.40.50.970 345 546 1.2E-71 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold VFU_RS01520 501c08fe3ea3aafc1678c916e941d86f 548 SUPERFAMILY SSF52467 180 341 7.64E-55 T 21-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VFU_RS01520 501c08fe3ea3aafc1678c916e941d86f 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 166 3.6E-55 T 21-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VFU_RS01520 501c08fe3ea3aafc1678c916e941d86f 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 412 431 - T 21-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 VFU_RS01520 501c08fe3ea3aafc1678c916e941d86f 548 SUPERFAMILY SSF52518 358 545 5.9E-65 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold VFU_RS01520 501c08fe3ea3aafc1678c916e941d86f 548 Gene3D G3DSA:3.40.50.1220 178 340 4.8E-54 T 21-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VFU_RS01520 501c08fe3ea3aafc1678c916e941d86f 548 Gene3D G3DSA:3.40.50.970 1 172 5.4E-71 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold VFU_RS03250 c5ddb9c1ef22fe66929486d01bfb7b57 313 Pfam PF01112 Asparaginase 6 307 2.3E-106 T 21-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 VFU_RS03250 c5ddb9c1ef22fe66929486d01bfb7b57 313 PANTHER PTHR10188 5 313 9.5E-125 T 21-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 VFU_RS03250 c5ddb9c1ef22fe66929486d01bfb7b57 313 SUPERFAMILY SSF56235 5 308 1.65E-93 T 21-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VFU_RS03250 c5ddb9c1ef22fe66929486d01bfb7b57 313 PANTHER PTHR10188:SF24 5 313 9.5E-125 T 21-04-2016 VFU_RS03495 241429abd09f6eeda9311e039fbbbce8 419 PANTHER PTHR30489:SF2 224 418 3.7E-117 T 21-04-2016 VFU_RS03495 241429abd09f6eeda9311e039fbbbce8 419 PANTHER PTHR30489:SF2 1 204 3.7E-117 T 21-04-2016 VFU_RS03495 241429abd09f6eeda9311e039fbbbce8 419 Pfam PF02687 FtsX-like permease family 293 410 4.2E-18 T 21-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 VFU_RS03495 241429abd09f6eeda9311e039fbbbce8 419 Pfam PF12704 MacB-like periplasmic core domain 20 207 4.2E-11 T 21-04-2016 IPR025857 MacB-like periplasmic core domain VFU_RS03495 241429abd09f6eeda9311e039fbbbce8 419 PANTHER PTHR30489 224 418 3.7E-117 T 21-04-2016 VFU_RS03495 241429abd09f6eeda9311e039fbbbce8 419 PANTHER PTHR30489 1 204 3.7E-117 T 21-04-2016 VFU_RS05890 4f8efce1864e2f0b9974ac59849139c8 153 Pfam PF03646 FlaG protein 50 150 5.6E-24 T 21-04-2016 IPR005186 FlaG protein VFU_RS05890 4f8efce1864e2f0b9974ac59849139c8 153 PANTHER PTHR37166 18 153 6.8E-25 T 21-04-2016 VFU_RS05890 4f8efce1864e2f0b9974ac59849139c8 153 PANTHER PTHR37166:SF1 18 153 6.8E-25 T 21-04-2016 VFU_RS05890 4f8efce1864e2f0b9974ac59849139c8 153 SUPERFAMILY SSF160214 57 149 1.2E-22 T 21-04-2016 IPR005186 FlaG protein VFU_RS05890 4f8efce1864e2f0b9974ac59849139c8 153 Gene3D G3DSA:3.30.160.170 58 148 1.3E-23 T 21-04-2016 IPR005186 FlaG protein VFU_RS08390 2f302e6ba25bf12bcfd3cc1ac8b39d15 219 Pfam PF11140 Protein of unknown function (DUF2913) 3 213 1.7E-84 T 21-04-2016 IPR021316 Protein of unknown function DUF2913 VFU_RS02140 9aacfc4f310ee143fbdcfb6331f7042c 247 Pfam PF00902 Sec-independent protein translocase protein (TatC) 12 221 3.3E-65 T 21-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VFU_RS02140 9aacfc4f310ee143fbdcfb6331f7042c 247 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 85 103 2.5E-51 T 21-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VFU_RS02140 9aacfc4f310ee143fbdcfb6331f7042c 247 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 103 129 2.5E-51 T 21-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VFU_RS02140 9aacfc4f310ee143fbdcfb6331f7042c 247 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 8 35 2.5E-51 T 21-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VFU_RS02140 9aacfc4f310ee143fbdcfb6331f7042c 247 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 154 182 2.5E-51 T 21-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VFU_RS02140 9aacfc4f310ee143fbdcfb6331f7042c 247 PANTHER PTHR30371 4 244 8.5E-109 T 21-04-2016 VFU_RS02140 9aacfc4f310ee143fbdcfb6331f7042c 247 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 9 226 2.2E-75 T 21-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VFU_RS02140 9aacfc4f310ee143fbdcfb6331f7042c 247 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 4 240 18.086 T 21-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VFU_RS02140 9aacfc4f310ee143fbdcfb6331f7042c 247 ProSitePatterns PS01218 TatC family signature. 154 173 - T 21-04-2016 IPR019820 Sec-independent periplasmic protein translocase, conserved site VFU_RS02140 9aacfc4f310ee143fbdcfb6331f7042c 247 PANTHER PTHR30371:SF0 4 244 8.5E-109 T 21-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VFU_RS10840 c644a0d4ae8176464924925a00f74426 396 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 376 8.0E-53 T 21-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VFU_RS10840 c644a0d4ae8176464924925a00f74426 396 SUPERFAMILY SSF53686 5 389 2.36E-141 T 21-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VFU_RS10840 c644a0d4ae8176464924925a00f74426 396 PANTHER PTHR10314 6 393 5.8E-222 T 21-04-2016 VFU_RS10840 c644a0d4ae8176464924925a00f74426 396 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 21-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 VFU_RS10840 c644a0d4ae8176464924925a00f74426 396 Gene3D G3DSA:3.40.50.1100 99 175 1.8E-21 T 21-04-2016 VFU_RS10840 c644a0d4ae8176464924925a00f74426 396 PANTHER PTHR10314:SF3 6 393 5.8E-222 T 21-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 VFU_RS10840 c644a0d4ae8176464924925a00f74426 396 PIRSF PIRSF001413 1 395 1.9E-166 T 21-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 VFU_RS10840 c644a0d4ae8176464924925a00f74426 396 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 390 49.392 T 21-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 VFU_RS10840 c644a0d4ae8176464924925a00f74426 396 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 6 388 2.6E-193 T 21-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 VFU_RS10840 c644a0d4ae8176464924925a00f74426 396 Gene3D G3DSA:3.40.50.1100 176 393 1.8E-95 T 21-04-2016 VFU_RS08865 10b98b55951508b188f8fb9c902e096d 232 SMART SM00345 22 80 1.1E-10 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VFU_RS08865 10b98b55951508b188f8fb9c902e096d 232 PANTHER PTHR11751:SF426 18 106 9.3E-54 T 21-04-2016 VFU_RS08865 10b98b55951508b188f8fb9c902e096d 232 SUPERFAMILY SSF48008 86 223 2.35E-25 T 21-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VFU_RS08865 10b98b55951508b188f8fb9c902e096d 232 Gene3D G3DSA:1.20.120.530 84 228 2.8E-31 T 21-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VFU_RS08865 10b98b55951508b188f8fb9c902e096d 232 SMART SM00895 90 217 3.3E-24 T 21-04-2016 IPR011711 GntR, C-terminal VFU_RS08865 10b98b55951508b188f8fb9c902e096d 232 PANTHER PTHR11751 18 106 9.3E-54 T 21-04-2016 VFU_RS08865 10b98b55951508b188f8fb9c902e096d 232 Pfam PF07729 FCD domain 90 215 1.5E-26 T 21-04-2016 IPR011711 GntR, C-terminal VFU_RS08865 10b98b55951508b188f8fb9c902e096d 232 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 80 3.3E-13 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VFU_RS08865 10b98b55951508b188f8fb9c902e096d 232 SUPERFAMILY SSF46785 16 106 2.73E-18 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS08865 10b98b55951508b188f8fb9c902e096d 232 Gene3D G3DSA:1.10.10.10 6 80 2.0E-20 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS03905 f1a27c3df916d5baddaf59638bc9d2d8 134 PANTHER PTHR33990 1 132 1.8E-31 T 21-04-2016 VFU_RS03905 f1a27c3df916d5baddaf59638bc9d2d8 134 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 4 129 5.8E-9 T 21-04-2016 IPR028973 3-demethylubiquinone-9 3-methyltransferase VFU_RS03905 f1a27c3df916d5baddaf59638bc9d2d8 134 Gene3D G3DSA:3.10.180.10 8 132 6.1E-35 T 21-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VFU_RS03905 f1a27c3df916d5baddaf59638bc9d2d8 134 PANTHER PTHR33990:SF1 1 132 1.8E-31 T 21-04-2016 VFU_RS03905 f1a27c3df916d5baddaf59638bc9d2d8 134 SUPERFAMILY SSF54593 2 132 5.47E-30 T 21-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VFU_RS06165 17f1b355d72342538816df131d28c7e8 262 SMART SM00382 29 199 2.5E-9 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS06165 17f1b355d72342538816df131d28c7e8 262 PANTHER PTHR24220:SF466 6 244 2.0E-124 T 21-04-2016 VFU_RS06165 17f1b355d72342538816df131d28c7e8 262 SUPERFAMILY SSF52540 2 228 3.9E-52 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS06165 17f1b355d72342538816df131d28c7e8 262 Gene3D G3DSA:3.40.50.300 2 216 5.8E-54 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS06165 17f1b355d72342538816df131d28c7e8 262 PANTHER PTHR24220 6 244 2.0E-124 T 21-04-2016 VFU_RS06165 17f1b355d72342538816df131d28c7e8 262 Pfam PF00005 ABC transporter 20 148 3.6E-29 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS08615 16acdbfb48635b03b4a18419744aba6e 525 PANTHER PTHR30047:SF2 1 522 2.1E-229 T 21-04-2016 VFU_RS08615 16acdbfb48635b03b4a18419744aba6e 525 PANTHER PTHR30047 1 522 2.1E-229 T 21-04-2016 VFU_RS08615 16acdbfb48635b03b4a18419744aba6e 525 ProSitePatterns PS01303 BCCT family of transporters signature. 336 345 - T 21-04-2016 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 VFU_RS08615 16acdbfb48635b03b4a18419744aba6e 525 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 33 520 4.2E-173 T 21-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 VFU_RS08615 16acdbfb48635b03b4a18419744aba6e 525 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 73 520 6.2E-137 T 21-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 VFU_RS13640 f23fd3ae171fd212f163e0fdb6f4139e 550 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 317 536 1.8E-15 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS13640 f23fd3ae171fd212f163e0fdb6f4139e 550 PANTHER PTHR30425:SF7 189 547 3.8E-246 T 21-04-2016 VFU_RS13640 f23fd3ae171fd212f163e0fdb6f4139e 550 Gene3D G3DSA:1.10.3720.10 26 45 4.2E-47 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS13640 f23fd3ae171fd212f163e0fdb6f4139e 550 Gene3D G3DSA:1.10.3720.10 277 545 4.2E-47 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS13640 f23fd3ae171fd212f163e0fdb6f4139e 550 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 271 541 2.2E-75 T 21-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 VFU_RS13640 f23fd3ae171fd212f163e0fdb6f4139e 550 SUPERFAMILY SSF161098 254 531 5.89E-34 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS13640 f23fd3ae171fd212f163e0fdb6f4139e 550 PANTHER PTHR30425 189 547 3.8E-246 T 21-04-2016 VFU_RS05175 002699b979fc65516e0b98c905512934 415 SUPERFAMILY SSF53474 47 413 2.22E-43 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold VFU_RS05175 002699b979fc65516e0b98c905512934 415 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 5 413 2.5E-223 T 21-04-2016 IPR010520 UPF0255 family VFU_RS05175 002699b979fc65516e0b98c905512934 415 Hamap MF_01063 Esterase FrsA [frsA]. 4 415 55.74 T 21-04-2016 IPR010520 UPF0255 family VFU_RS05175 002699b979fc65516e0b98c905512934 415 Gene3D G3DSA:3.40.50.1820 171 413 1.7E-20 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold VFU_RS00875 ce0a3c9764a9d877fd7af92bd47cf348 405 Gene3D G3DSA:1.10.150.130 98 186 1.0E-11 T 21-04-2016 IPR023109 Integrase/recombinase, N-terminal VFU_RS00875 ce0a3c9764a9d877fd7af92bd47cf348 405 Gene3D G3DSA:1.10.443.10 201 389 4.0E-26 T 21-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VFU_RS00875 ce0a3c9764a9d877fd7af92bd47cf348 405 Pfam PF13356 Domain of unknown function (DUF4102) 4 88 1.6E-16 T 21-04-2016 IPR025166 Domain of unknown function DUF4102 VFU_RS00875 ce0a3c9764a9d877fd7af92bd47cf348 405 SUPERFAMILY SSF56349 98 392 1.03E-53 T 21-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VFU_RS00875 ce0a3c9764a9d877fd7af92bd47cf348 405 PANTHER PTHR30629 1 403 3.3E-73 T 21-04-2016 VFU_RS00875 ce0a3c9764a9d877fd7af92bd47cf348 405 Pfam PF00589 Phage integrase family 202 373 3.1E-15 T 21-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VFU_RS09980 b4aae24c8e14fa97e5b7e3031615e748 85 PANTHER PTHR35177:SF2 1 79 1.0E-23 T 21-04-2016 VFU_RS09980 b4aae24c8e14fa97e5b7e3031615e748 85 SUPERFAMILY SSF159127 1 81 1.05E-22 T 21-04-2016 VFU_RS09980 b4aae24c8e14fa97e5b7e3031615e748 85 PANTHER PTHR35177 1 79 1.0E-23 T 21-04-2016 VFU_RS09980 b4aae24c8e14fa97e5b7e3031615e748 85 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 81 1.1E-22 T 21-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC VFU_RS09980 b4aae24c8e14fa97e5b7e3031615e748 85 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 1.2E-13 T 21-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC VFU_RS09980 b4aae24c8e14fa97e5b7e3031615e748 85 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 59 71 1.2E-13 T 21-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC VFU_RS09980 b4aae24c8e14fa97e5b7e3031615e748 85 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 19 35 1.2E-13 T 21-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC VFU_RS09980 b4aae24c8e14fa97e5b7e3031615e748 85 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 41 57 1.2E-13 T 21-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC VFU_RS09980 b4aae24c8e14fa97e5b7e3031615e748 85 Pfam PF01455 HupF/HypC family 1 67 8.5E-22 T 21-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC VFU_RS13310 dc01b8b13d6b79de5b28a0d102773f83 420 Gene3D G3DSA:3.30.9.10 270 359 1.8E-14 T 21-04-2016 VFU_RS13310 dc01b8b13d6b79de5b28a0d102773f83 420 Gene3D G3DSA:3.30.9.10 134 190 1.8E-14 T 21-04-2016 VFU_RS13310 dc01b8b13d6b79de5b28a0d102773f83 420 Gene3D G3DSA:3.40.50.720 78 106 1.9E-5 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS13310 dc01b8b13d6b79de5b28a0d102773f83 420 SUPERFAMILY SSF51905 1 54 9.97E-53 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS13310 dc01b8b13d6b79de5b28a0d102773f83 420 SUPERFAMILY SSF51905 360 416 9.97E-53 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS13310 dc01b8b13d6b79de5b28a0d102773f83 420 SUPERFAMILY SSF51905 107 270 9.97E-53 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS13310 dc01b8b13d6b79de5b28a0d102773f83 420 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 411 48.024 T 21-04-2016 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 UniPathway: UPA00043 VFU_RS13310 dc01b8b13d6b79de5b28a0d102773f83 420 PANTHER PTHR13847 1 63 3.7E-226 T 21-04-2016 VFU_RS13310 dc01b8b13d6b79de5b28a0d102773f83 420 PANTHER PTHR13847 107 418 3.7E-226 T 21-04-2016 VFU_RS13310 dc01b8b13d6b79de5b28a0d102773f83 420 Pfam PF01266 FAD dependent oxidoreductase 3 398 2.1E-65 T 21-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VFU_RS13310 dc01b8b13d6b79de5b28a0d102773f83 420 Gene3D G3DSA:3.50.50.60 1 58 7.2E-48 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS13310 dc01b8b13d6b79de5b28a0d102773f83 420 Gene3D G3DSA:3.50.50.60 191 269 7.2E-48 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS13310 dc01b8b13d6b79de5b28a0d102773f83 420 Gene3D G3DSA:3.50.50.60 360 417 7.2E-48 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS13310 dc01b8b13d6b79de5b28a0d102773f83 420 Gene3D G3DSA:3.50.50.60 108 130 7.2E-48 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS13310 dc01b8b13d6b79de5b28a0d102773f83 420 SUPERFAMILY SSF54373 270 360 3.53E-18 T 21-04-2016 VFU_RS13310 dc01b8b13d6b79de5b28a0d102773f83 420 PANTHER PTHR13847:SF148 1 63 3.7E-226 T 21-04-2016 VFU_RS13310 dc01b8b13d6b79de5b28a0d102773f83 420 PANTHER PTHR13847:SF148 107 418 3.7E-226 T 21-04-2016 VFU_RS12550 6e327fc5c54d3a6219eb55b9807d7783 348 Hamap MF_00462 Electron transport complex subunit RsxD [rsxD]. 3 348 27.683 T 21-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 VFU_RS12550 6e327fc5c54d3a6219eb55b9807d7783 348 PANTHER PTHR30578 3 348 1.9E-153 T 21-04-2016 VFU_RS12550 6e327fc5c54d3a6219eb55b9807d7783 348 Pfam PF03116 NQR2, RnfD, RnfE family 6 347 6.1E-107 T 21-04-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 VFU_RS12550 6e327fc5c54d3a6219eb55b9807d7783 348 PANTHER PTHR30578:SF0 3 348 1.9E-153 T 21-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 VFU_RS12550 6e327fc5c54d3a6219eb55b9807d7783 348 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 348 1.1E-141 T 21-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 VFU_RS05765 07371f319c679081974d80295a9af521 78 SUPERFAMILY SSF64307 5 71 3.01E-10 T 21-04-2016 IPR001455 TusA-like domain VFU_RS05765 07371f319c679081974d80295a9af521 78 Pfam PF01206 Sulfurtransferase TusA 5 57 2.5E-11 T 21-04-2016 IPR001455 TusA-like domain VFU_RS05765 07371f319c679081974d80295a9af521 78 Gene3D G3DSA:3.30.110.40 4 53 7.3E-11 T 21-04-2016 IPR001455 TusA-like domain VFU_RS08480 0451bc79e4a8c86141fefc5beabd0289 165 PANTHER PTHR11603 6 165 1.1E-69 T 21-04-2016 VFU_RS08480 0451bc79e4a8c86141fefc5beabd0289 165 SUPERFAMILY SSF52540 1 162 1.35E-24 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS08480 0451bc79e4a8c86141fefc5beabd0289 165 Gene3D G3DSA:3.40.50.300 2 162 1.2E-61 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS08480 0451bc79e4a8c86141fefc5beabd0289 165 PRINTS PR01100 Shikimate kinase family signature 6 21 1.8E-6 T 21-04-2016 VFU_RS08480 0451bc79e4a8c86141fefc5beabd0289 165 PRINTS PR01100 Shikimate kinase family signature 96 113 1.8E-6 T 21-04-2016 VFU_RS08480 0451bc79e4a8c86141fefc5beabd0289 165 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 6 160 6.6E-53 T 21-04-2016 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530|UniPathway: UPA00792 VFU_RS08480 0451bc79e4a8c86141fefc5beabd0289 165 Pfam PF01202 Shikimate kinase 12 161 8.6E-18 T 21-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 VFU_RS11750 1073583ac798228f69188d7df5b415ea 94 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 30.749 T 21-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 VFU_RS11750 1073583ac798228f69188d7df5b415ea 94 PANTHER PTHR33175 1 93 1.5E-49 T 21-04-2016 VFU_RS11750 1073583ac798228f69188d7df5b415ea 94 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 92 7.1E-49 T 21-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 VFU_RS11750 1073583ac798228f69188d7df5b415ea 94 Pfam PF00216 Bacterial DNA-binding protein 1 91 1.5E-30 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VFU_RS11750 1073583ac798228f69188d7df5b415ea 94 SUPERFAMILY SSF47729 1 91 1.06E-30 T 21-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 VFU_RS11750 1073583ac798228f69188d7df5b415ea 94 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 21-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VFU_RS11750 1073583ac798228f69188d7df5b415ea 94 Gene3D G3DSA:4.10.520.10 1 92 2.7E-35 T 21-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 VFU_RS11750 1073583ac798228f69188d7df5b415ea 94 PANTHER PTHR33175:SF5 1 93 1.5E-49 T 21-04-2016 VFU_RS11750 1073583ac798228f69188d7df5b415ea 94 SMART SM00411 1 91 7.1E-43 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VFU_RS11750 1073583ac798228f69188d7df5b415ea 94 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.0E-18 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VFU_RS11750 1073583ac798228f69188d7df5b415ea 94 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.0E-18 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VFU_RS11750 1073583ac798228f69188d7df5b415ea 94 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.0E-18 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VFU_RS14565 54359ac74712fe8299271cc7228658ae 339 SUPERFAMILY SSF53067 101 309 2.16E-44 T 21-04-2016 VFU_RS14565 54359ac74712fe8299271cc7228658ae 339 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 5 306 1.6E-123 T 21-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VFU_RS14565 54359ac74712fe8299271cc7228658ae 339 PANTHER PTHR11735 1 334 4.0E-167 T 21-04-2016 VFU_RS14565 54359ac74712fe8299271cc7228658ae 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 1.3E-50 T 21-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VFU_RS14565 54359ac74712fe8299271cc7228658ae 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 1.3E-50 T 21-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VFU_RS14565 54359ac74712fe8299271cc7228658ae 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 1.3E-50 T 21-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VFU_RS14565 54359ac74712fe8299271cc7228658ae 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 1.3E-50 T 21-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VFU_RS14565 54359ac74712fe8299271cc7228658ae 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 1.3E-50 T 21-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VFU_RS14565 54359ac74712fe8299271cc7228658ae 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 1.3E-50 T 21-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VFU_RS14565 54359ac74712fe8299271cc7228658ae 339 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 21-04-2016 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VFU_RS14565 54359ac74712fe8299271cc7228658ae 339 PANTHER PTHR11735:SF6 1 334 4.0E-167 T 21-04-2016 VFU_RS14565 54359ac74712fe8299271cc7228658ae 339 SUPERFAMILY SSF53067 3 123 9.06E-31 T 21-04-2016 VFU_RS14565 54359ac74712fe8299271cc7228658ae 339 Gene3D G3DSA:3.30.420.40 1 159 6.2E-48 T 21-04-2016 VFU_RS14565 54359ac74712fe8299271cc7228658ae 339 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 62.745 T 21-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VFU_RS14565 54359ac74712fe8299271cc7228658ae 339 Pfam PF00814 Glycoprotease family 24 307 3.4E-102 T 21-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VFU_RS14565 54359ac74712fe8299271cc7228658ae 339 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 4.9E-134 T 21-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VFU_RS05740 17479c1ad05165f472e7c2012e3b9b69 423 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 18 249 1.1E-72 T 21-04-2016 IPR018642 Protein of unknown function DUF2066 VFU_RS11470 88e2f941400eeae2bd171b07c2992cda 334 SUPERFAMILY SSF56935 32 334 9.46E-27 T 21-04-2016 VFU_RS11470 88e2f941400eeae2bd171b07c2992cda 334 Gene3D G3DSA:2.40.160.10 31 334 3.9E-38 T 21-04-2016 IPR023614 Porin domain VFU_RS11470 88e2f941400eeae2bd171b07c2992cda 334 Pfam PF13609 Gram-negative porin 7 315 2.7E-24 T 21-04-2016 VFU_RS04160 6cd353340e20eadc55409b35a8f6ab8d 404 Gene3D G3DSA:3.30.460.10 2 121 2.0E-30 T 21-04-2016 VFU_RS04160 6cd353340e20eadc55409b35a8f6ab8d 404 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 404 52.382 T 21-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 VFU_RS04160 6cd353340e20eadc55409b35a8f6ab8d 404 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 43.012 T 21-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 VFU_RS04160 6cd353340e20eadc55409b35a8f6ab8d 404 Pfam PF01743 Poly A polymerase head domain 3 122 9.1E-17 T 21-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 VFU_RS04160 6cd353340e20eadc55409b35a8f6ab8d 404 SUPERFAMILY SSF81301 2 119 3.16E-30 T 21-04-2016 VFU_RS04160 6cd353340e20eadc55409b35a8f6ab8d 404 Pfam PF01966 HD domain 231 346 4.9E-8 T 21-04-2016 IPR006674 HD domain VFU_RS04160 6cd353340e20eadc55409b35a8f6ab8d 404 PIRSF PIRSF000813 1 404 3.1E-198 T 21-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 VFU_RS04160 6cd353340e20eadc55409b35a8f6ab8d 404 SUPERFAMILY SSF81891 120 402 3.14E-56 T 21-04-2016 VFU_RS04160 6cd353340e20eadc55409b35a8f6ab8d 404 PANTHER PTHR13734 1 237 2.5E-73 T 21-04-2016 VFU_RS04160 6cd353340e20eadc55409b35a8f6ab8d 404 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 4.8E-13 T 21-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain VFU_RS04160 6cd353340e20eadc55409b35a8f6ab8d 404 Gene3D G3DSA:1.10.3090.10 122 359 3.3E-55 T 21-04-2016 VFU_RS03565 e1720cc626e07d910803feddbdc58aa5 329 SUPERFAMILY SSF53850 23 324 7.37E-64 T 21-04-2016 VFU_RS03565 e1720cc626e07d910803feddbdc58aa5 329 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 12 328 2.3E-149 T 21-04-2016 IPR005967 Proteobacterial thiamine ABC transporter, periplasmic binding protein GO:0005524|GO:0015888|GO:0030288|GO:0048502 VFU_RS03565 e1720cc626e07d910803feddbdc58aa5 329 PANTHER PTHR30006:SF3 1 329 4.9E-126 T 21-04-2016 VFU_RS03565 e1720cc626e07d910803feddbdc58aa5 329 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 20 323 8.2E-145 T 21-04-2016 IPR005948 Thiamine ABC transporter periplasmic binding protein GO:0005215|GO:0006810|GO:0015888|GO:0030288|GO:0030975 VFU_RS03565 e1720cc626e07d910803feddbdc58aa5 329 Gene3D G3DSA:3.40.190.10 23 173 4.9E-28 T 21-04-2016 VFU_RS03565 e1720cc626e07d910803feddbdc58aa5 329 Pfam PF13343 Bacterial extracellular solute-binding protein 76 294 5.1E-19 T 21-04-2016 VFU_RS03565 e1720cc626e07d910803feddbdc58aa5 329 Gene3D G3DSA:3.40.190.10 180 286 3.4E-7 T 21-04-2016 VFU_RS03565 e1720cc626e07d910803feddbdc58aa5 329 PANTHER PTHR30006 1 329 4.9E-126 T 21-04-2016 VFU_RS15180 2c309f39be2c9cb47a7a0f5abbcd9396 363 Gene3D G3DSA:1.25.40.10 271 333 3.2E-5 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VFU_RS15180 2c309f39be2c9cb47a7a0f5abbcd9396 363 Pfam PF14559 Tetratricopeptide repeat 182 238 3.4E-6 T 21-04-2016 VFU_RS15180 2c309f39be2c9cb47a7a0f5abbcd9396 363 SMART SM00028 306 339 260.0 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VFU_RS15180 2c309f39be2c9cb47a7a0f5abbcd9396 363 SMART SM00028 272 305 25.0 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VFU_RS15180 2c309f39be2c9cb47a7a0f5abbcd9396 363 SMART SM00028 206 239 260.0 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VFU_RS15180 2c309f39be2c9cb47a7a0f5abbcd9396 363 SMART SM00028 172 205 40.0 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VFU_RS15180 2c309f39be2c9cb47a7a0f5abbcd9396 363 SUPERFAMILY SSF48452 172 333 1.37E-13 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VFU_RS15180 2c309f39be2c9cb47a7a0f5abbcd9396 363 Gene3D G3DSA:1.25.40.10 172 261 1.6E-12 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VFU_RS07025 717dcf6c17a6e1b877262180fc565321 287 Gene3D G3DSA:3.10.129.10 124 285 4.9E-58 T 21-04-2016 IPR029069 HotDog domain VFU_RS07025 717dcf6c17a6e1b877262180fc565321 287 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 2.1E-95 T 21-04-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 VFU_RS07025 717dcf6c17a6e1b877262180fc565321 287 Pfam PF13622 Thioesterase-like superfamily 33 282 1.3E-61 T 21-04-2016 VFU_RS07025 717dcf6c17a6e1b877262180fc565321 287 SUPERFAMILY SSF54637 116 283 9.34E-59 T 21-04-2016 IPR029069 HotDog domain VFU_RS07025 717dcf6c17a6e1b877262180fc565321 287 PANTHER PTHR11066:SF34 5 286 5.4E-119 T 21-04-2016 VFU_RS07025 717dcf6c17a6e1b877262180fc565321 287 PANTHER PTHR11066 5 286 5.4E-119 T 21-04-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 VFU_RS07025 717dcf6c17a6e1b877262180fc565321 287 Gene3D G3DSA:3.10.129.10 4 116 7.8E-47 T 21-04-2016 IPR029069 HotDog domain VFU_RS07025 717dcf6c17a6e1b877262180fc565321 287 SUPERFAMILY SSF54637 6 114 2.11E-40 T 21-04-2016 IPR029069 HotDog domain VFU_RS06210 c7ddc4d1b7ce5af4c5c954fe9f30e82c 926 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 42 65 - T 21-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 VFU_RS06210 c7ddc4d1b7ce5af4c5c954fe9f30e82c 926 PANTHER PTHR11851 377 919 0.0 T 21-04-2016 VFU_RS06210 c7ddc4d1b7ce5af4c5c954fe9f30e82c 926 SUPERFAMILY SSF63411 4 226 5.32E-58 T 21-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VFU_RS06210 c7ddc4d1b7ce5af4c5c954fe9f30e82c 926 PANTHER PTHR11851:SF131 1 360 0.0 T 21-04-2016 VFU_RS06210 c7ddc4d1b7ce5af4c5c954fe9f30e82c 926 PANTHER PTHR11851 1 360 0.0 T 21-04-2016 VFU_RS06210 c7ddc4d1b7ce5af4c5c954fe9f30e82c 926 Gene3D G3DSA:3.30.830.10 472 707 3.0E-66 T 21-04-2016 IPR011237 Peptidase M16 domain GO:0046872 VFU_RS06210 c7ddc4d1b7ce5af4c5c954fe9f30e82c 926 Pfam PF16187 Middle or third domain of peptidase_M16 366 645 2.0E-83 T 21-04-2016 IPR032632 Peptidase M16, middle/third domain VFU_RS06210 c7ddc4d1b7ce5af4c5c954fe9f30e82c 926 PANTHER PTHR11851:SF131 377 919 0.0 T 21-04-2016 VFU_RS06210 c7ddc4d1b7ce5af4c5c954fe9f30e82c 926 Gene3D G3DSA:3.30.830.10 4 230 9.0E-73 T 21-04-2016 IPR011237 Peptidase M16 domain GO:0046872 VFU_RS06210 c7ddc4d1b7ce5af4c5c954fe9f30e82c 926 SUPERFAMILY SSF63411 470 695 4.02E-59 T 21-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VFU_RS06210 c7ddc4d1b7ce5af4c5c954fe9f30e82c 926 Gene3D G3DSA:3.30.830.10 240 471 1.0E-73 T 21-04-2016 IPR011237 Peptidase M16 domain GO:0046872 VFU_RS06210 c7ddc4d1b7ce5af4c5c954fe9f30e82c 926 Pfam PF05193 Peptidase M16 inactive domain 651 824 4.2E-9 T 21-04-2016 IPR007863 Peptidase M16, C-terminal VFU_RS06210 c7ddc4d1b7ce5af4c5c954fe9f30e82c 926 Pfam PF05193 Peptidase M16 inactive domain 182 359 1.6E-23 T 21-04-2016 IPR007863 Peptidase M16, C-terminal VFU_RS06210 c7ddc4d1b7ce5af4c5c954fe9f30e82c 926 SUPERFAMILY SSF63411 232 467 4.58E-75 T 21-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VFU_RS06210 c7ddc4d1b7ce5af4c5c954fe9f30e82c 926 SUPERFAMILY SSF63411 704 914 6.17E-46 T 21-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VFU_RS06210 c7ddc4d1b7ce5af4c5c954fe9f30e82c 926 Pfam PF00675 Insulinase (Peptidase family M16) 21 158 2.8E-38 T 21-04-2016 IPR011765 Peptidase M16, N-terminal VFU_RS06210 c7ddc4d1b7ce5af4c5c954fe9f30e82c 926 Gene3D G3DSA:3.30.830.10 708 923 7.1E-49 T 21-04-2016 IPR011237 Peptidase M16 domain GO:0046872 VFU_RS04355 cbd6851d4a5605ab7c80cbe2e0b7a171 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 3.4E-6 T 21-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 VFU_RS04355 cbd6851d4a5605ab7c80cbe2e0b7a171 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 3.4E-6 T 21-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 VFU_RS04355 cbd6851d4a5605ab7c80cbe2e0b7a171 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 3.4E-6 T 21-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 VFU_RS04355 cbd6851d4a5605ab7c80cbe2e0b7a171 256 PANTHER PTHR30413:SF2 3 256 3.1E-163 T 21-04-2016 VFU_RS04355 cbd6851d4a5605ab7c80cbe2e0b7a171 256 Pfam PF01061 ABC-2 type transporter 8 218 1.8E-40 T 21-04-2016 IPR013525 ABC-2 type transporter GO:0016020 VFU_RS04355 cbd6851d4a5605ab7c80cbe2e0b7a171 256 PIRSF PIRSF006648 4 252 9.2E-25 T 21-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 VFU_RS04355 cbd6851d4a5605ab7c80cbe2e0b7a171 256 PANTHER PTHR30413 3 256 3.1E-163 T 21-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 VFU_RS07950 ef10dc036a6f584a06acb51b44c4fb49 107 Pfam PF09413 Putative prokaryotic signal transducing protein 2 68 2.9E-10 T 21-04-2016 IPR018551 Domain of unknown function DUF2007 VFU_RS07950 ef10dc036a6f584a06acb51b44c4fb49 107 ProSitePatterns PS01358 Zinc finger RanBP2-type signature. 80 99 - T 21-04-2016 IPR001876 Zinc finger, RanBP2-type GO:0008270 VFU_RS06530 f6b06f01b5f84c7c0b7c059410493d60 337 PANTHER PTHR30518 1 337 4.6E-90 T 21-04-2016 VFU_RS06530 f6b06f01b5f84c7c0b7c059410493d60 337 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 5 336 5.4E-98 T 21-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like VFU_RS06530 f6b06f01b5f84c7c0b7c059410493d60 337 Gene3D G3DSA:3.30.160.60 73 110 9.2E-19 T 21-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 VFU_RS06530 f6b06f01b5f84c7c0b7c059410493d60 337 Pfam PF02618 YceG-like family 43 328 3.3E-83 T 21-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like VFU_RS06530 f6b06f01b5f84c7c0b7c059410493d60 337 PANTHER PTHR30518:SF2 1 337 4.6E-90 T 21-04-2016 VFU_RS06530 f6b06f01b5f84c7c0b7c059410493d60 337 Gene3D G3DSA:3.30.160.60 303 337 3.5E-18 T 21-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 VFU_RS05965 b4dd357fc91d823ffa31c3185c839b3d 352 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 250 319 8.6E-17 T 21-04-2016 IPR001543 Surface presentation of antigen (SpoA) VFU_RS05965 b4dd357fc91d823ffa31c3185c839b3d 352 PANTHER PTHR30034 2 344 3.4E-151 T 21-04-2016 VFU_RS05965 b4dd357fc91d823ffa31c3185c839b3d 352 Gene3D G3DSA:3.40.1550.10 60 230 4.6E-8 T 21-04-2016 IPR028976 CheC-like domain VFU_RS05965 b4dd357fc91d823ffa31c3185c839b3d 352 PIRSF PIRSF002888 1 328 1.3E-92 T 21-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VFU_RS05965 b4dd357fc91d823ffa31c3185c839b3d 352 PANTHER PTHR30034:SF0 2 344 3.4E-151 T 21-04-2016 VFU_RS05965 b4dd357fc91d823ffa31c3185c839b3d 352 SUPERFAMILY SSF103039 54 230 4.53E-23 T 21-04-2016 IPR028976 CheC-like domain VFU_RS05965 b4dd357fc91d823ffa31c3185c839b3d 352 SUPERFAMILY SSF103039 4 13 4.53E-23 T 21-04-2016 IPR028976 CheC-like domain VFU_RS05965 b4dd357fc91d823ffa31c3185c839b3d 352 Gene3D G3DSA:2.30.330.10 243 323 4.5E-9 T 21-04-2016 VFU_RS05965 b4dd357fc91d823ffa31c3185c839b3d 352 Pfam PF02154 Flagellar motor switch protein FliM 37 229 1.1E-81 T 21-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VFU_RS05965 b4dd357fc91d823ffa31c3185c839b3d 352 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 319 2.2E-121 T 21-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VFU_RS05965 b4dd357fc91d823ffa31c3185c839b3d 352 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 7.6E-19 T 21-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VFU_RS05965 b4dd357fc91d823ffa31c3185c839b3d 352 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 7.6E-19 T 21-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VFU_RS05965 b4dd357fc91d823ffa31c3185c839b3d 352 PRINTS PR00955 Flagellar motor switch protein FliM signature 113 132 7.6E-19 T 21-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VFU_RS05965 b4dd357fc91d823ffa31c3185c839b3d 352 PRINTS PR00955 Flagellar motor switch protein FliM signature 88 104 7.6E-19 T 21-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VFU_RS05965 b4dd357fc91d823ffa31c3185c839b3d 352 SUPERFAMILY SSF101801 247 323 1.96E-13 T 21-04-2016 IPR001543 Surface presentation of antigen (SpoA) VFU_RS06485 325dc33a711ae88a182e0faa99bde2a6 174 Pfam PF02620 Uncharacterized ACR, COG1399 62 173 7.4E-17 T 21-04-2016 IPR003772 Protein of unknown function DUF177 VFU_RS06485 325dc33a711ae88a182e0faa99bde2a6 174 PANTHER PTHR38099 2 174 7.4E-76 T 21-04-2016 VFU_RS00080 f4c0bd92e86d8e8f68f1e94a239a87aa 310 Gene3D G3DSA:3.40.50.300 8 174 5.0E-53 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS00080 f4c0bd92e86d8e8f68f1e94a239a87aa 310 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 9 295 3.0E-116 T 21-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 VFU_RS00080 f4c0bd92e86d8e8f68f1e94a239a87aa 310 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 8 301 30.113 T 21-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 VFU_RS00080 f4c0bd92e86d8e8f68f1e94a239a87aa 310 PANTHER PTHR11088 6 292 2.6E-121 T 21-04-2016 VFU_RS00080 f4c0bd92e86d8e8f68f1e94a239a87aa 310 Pfam PF01715 IPP transferase 42 287 1.6E-85 T 21-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 VFU_RS00080 f4c0bd92e86d8e8f68f1e94a239a87aa 310 SUPERFAMILY SSF52540 10 152 5.6E-18 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS00080 f4c0bd92e86d8e8f68f1e94a239a87aa 310 Gene3D G3DSA:1.10.287.890 203 285 1.8E-33 T 21-04-2016 VFU_RS04475 60bacd791a3cf1245d9ddb4347861a30 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 4.0E-17 T 21-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VFU_RS04475 60bacd791a3cf1245d9ddb4347861a30 327 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS04475 60bacd791a3cf1245d9ddb4347861a30 327 PANTHER PTHR24220 7 318 3.3E-136 T 21-04-2016 VFU_RS04475 60bacd791a3cf1245d9ddb4347861a30 327 PANTHER PTHR24220:SF535 7 318 3.3E-136 T 21-04-2016 VFU_RS04475 60bacd791a3cf1245d9ddb4347861a30 327 SMART SM00382 34 231 1.4E-13 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS04475 60bacd791a3cf1245d9ddb4347861a30 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 317 1.3E-22 T 21-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VFU_RS04475 60bacd791a3cf1245d9ddb4347861a30 327 Gene3D G3DSA:3.40.50.300 4 253 1.7E-71 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS04475 60bacd791a3cf1245d9ddb4347861a30 327 SUPERFAMILY SSF52540 5 252 6.95E-65 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS04475 60bacd791a3cf1245d9ddb4347861a30 327 Pfam PF00005 ABC transporter 26 181 3.0E-28 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS11715 e16fe8e871ae7870b7b30b2fc71e13cd 396 PANTHER PTHR13369 97 249 1.6E-91 T 21-04-2016 VFU_RS11715 e16fe8e871ae7870b7b30b2fc71e13cd 396 PANTHER PTHR13369 326 395 1.6E-91 T 21-04-2016 VFU_RS11715 e16fe8e871ae7870b7b30b2fc71e13cd 396 PANTHER PTHR13369:SF1 97 249 1.6E-91 T 21-04-2016 VFU_RS11715 e16fe8e871ae7870b7b30b2fc71e13cd 396 PANTHER PTHR13369:SF1 326 395 1.6E-91 T 21-04-2016 VFU_RS11715 e16fe8e871ae7870b7b30b2fc71e13cd 396 Pfam PF13679 Methyltransferase domain 104 227 8.4E-17 T 21-04-2016 IPR025714 Methyltransferase domain VFU_RS11715 e16fe8e871ae7870b7b30b2fc71e13cd 396 SUPERFAMILY SSF53335 114 181 1.13E-8 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS11715 e16fe8e871ae7870b7b30b2fc71e13cd 396 Gene3D G3DSA:3.40.50.150 118 179 2.0E-7 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS02150 b926a08dc18857de0bda9b8f746aacb5 347 PIRSF PIRSF001415 2 336 1.3E-150 T 21-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VFU_RS02150 b926a08dc18857de0bda9b8f746aacb5 347 SMART SM01004 9 333 6.5E-243 T 21-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VFU_RS02150 b926a08dc18857de0bda9b8f746aacb5 347 SUPERFAMILY SSF51569 7 335 1.32E-143 T 21-04-2016 VFU_RS02150 b926a08dc18857de0bda9b8f746aacb5 347 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 332 1.6E-140 T 21-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VFU_RS02150 b926a08dc18857de0bda9b8f746aacb5 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 5.4E-57 T 21-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VFU_RS02150 b926a08dc18857de0bda9b8f746aacb5 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 5.4E-57 T 21-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VFU_RS02150 b926a08dc18857de0bda9b8f746aacb5 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 5.4E-57 T 21-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VFU_RS02150 b926a08dc18857de0bda9b8f746aacb5 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 5.4E-57 T 21-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VFU_RS02150 b926a08dc18857de0bda9b8f746aacb5 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 5.4E-57 T 21-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VFU_RS02150 b926a08dc18857de0bda9b8f746aacb5 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 5.4E-57 T 21-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VFU_RS02150 b926a08dc18857de0bda9b8f746aacb5 347 Gene3D G3DSA:3.20.20.70 7 336 3.0E-153 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS02150 b926a08dc18857de0bda9b8f746aacb5 347 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 21-04-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VFU_RS02150 b926a08dc18857de0bda9b8f746aacb5 347 PANTHER PTHR11458 9 347 1.2E-189 T 21-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VFU_RS03000 634c6596c47185ed6e61f53f0294a7ed 188 PANTHER PTHR30053 1 188 1.1E-90 T 21-04-2016 VFU_RS03000 634c6596c47185ed6e61f53f0294a7ed 188 SMART SM01185 69 123 1.9E-24 T 21-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 VFU_RS03000 634c6596c47185ed6e61f53f0294a7ed 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 2.8E-22 T 21-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 VFU_RS03000 634c6596c47185ed6e61f53f0294a7ed 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 62 9.6E-25 T 21-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 VFU_RS03000 634c6596c47185ed6e61f53f0294a7ed 188 SUPERFAMILY SSF50249 130 187 1.88E-18 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS03000 634c6596c47185ed6e61f53f0294a7ed 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 1.1E-25 T 21-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 VFU_RS03000 634c6596c47185ed6e61f53f0294a7ed 188 Gene3D G3DSA:2.40.50.140 66 129 1.3E-25 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS03000 634c6596c47185ed6e61f53f0294a7ed 188 SMART SM00841 131 186 5.0E-32 T 21-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 VFU_RS03000 634c6596c47185ed6e61f53f0294a7ed 188 PIRSF PIRSF005901 2 188 4.0E-65 T 21-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 VFU_RS03000 634c6596c47185ed6e61f53f0294a7ed 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 49.938 T 21-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 VFU_RS03000 634c6596c47185ed6e61f53f0294a7ed 188 SUPERFAMILY SSF50104 2 64 1.65E-20 T 21-04-2016 IPR008991 Translation protein SH3-like domain VFU_RS03000 634c6596c47185ed6e61f53f0294a7ed 188 TIGRFAM TIGR00038 efp: translation elongation factor P 5 187 8.6E-78 T 21-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 VFU_RS03000 634c6596c47185ed6e61f53f0294a7ed 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 21-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 VFU_RS03000 634c6596c47185ed6e61f53f0294a7ed 188 Gene3D G3DSA:2.40.50.140 130 187 7.3E-29 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS03000 634c6596c47185ed6e61f53f0294a7ed 188 SUPERFAMILY SSF50249 70 128 3.47E-17 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS03000 634c6596c47185ed6e61f53f0294a7ed 188 Gene3D G3DSA:2.30.30.30 1 65 1.2E-28 T 21-04-2016 IPR014722 Ribosomal protein L2 domain 2 VFU_RS10100 87ddf3b86cae0d2e807e422c238146df 324 PANTHER PTHR30438 1 324 1.8E-119 T 21-04-2016 VFU_RS10100 87ddf3b86cae0d2e807e422c238146df 324 Pfam PF13437 HlyD family secretion protein 206 282 1.5E-5 T 21-04-2016 VFU_RS10100 87ddf3b86cae0d2e807e422c238146df 324 Pfam PF13533 Biotin-lipoyl like 45 88 3.5E-13 T 21-04-2016 VFU_RS10100 87ddf3b86cae0d2e807e422c238146df 324 SUPERFAMILY SSF111369 123 148 3.14E-7 T 21-04-2016 VFU_RS10100 87ddf3b86cae0d2e807e422c238146df 324 SUPERFAMILY SSF111369 40 89 3.14E-7 T 21-04-2016 VFU_RS10100 87ddf3b86cae0d2e807e422c238146df 324 SUPERFAMILY SSF111369 182 269 3.14E-7 T 21-04-2016 VFU_RS10100 87ddf3b86cae0d2e807e422c238146df 324 PANTHER PTHR30438:SF1 1 324 1.8E-119 T 21-04-2016 VFU_RS10100 87ddf3b86cae0d2e807e422c238146df 324 Gene3D G3DSA:2.40.50.100 42 76 8.8E-14 T 21-04-2016 VFU_RS10100 87ddf3b86cae0d2e807e422c238146df 324 Gene3D G3DSA:2.40.50.100 203 236 8.8E-14 T 21-04-2016 VFU_RS04260 bd1319b3deacdacea50ffce033c3767e 202 Gene3D G3DSA:3.40.50.300 2 196 2.0E-68 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS04260 bd1319b3deacdacea50ffce033c3767e 202 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 197 27.54 T 21-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 VFU_RS04260 bd1319b3deacdacea50ffce033c3767e 202 SUPERFAMILY SSF52540 1 193 2.42E-42 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS04260 bd1319b3deacdacea50ffce033c3767e 202 Pfam PF01121 Dephospho-CoA kinase 3 180 2.2E-72 T 21-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 VFU_RS04260 bd1319b3deacdacea50ffce033c3767e 202 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 188 1.4E-67 T 21-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 VFU_RS04260 bd1319b3deacdacea50ffce033c3767e 202 PANTHER PTHR10695 1 195 2.0E-71 T 21-04-2016 VFU_RS10560 257af863719ffad76d158a1d18bcd8a9 222 Gene3D G3DSA:3.30.1330.60 106 220 3.2E-36 T 21-04-2016 IPR006665 OmpA-like domain VFU_RS10560 257af863719ffad76d158a1d18bcd8a9 222 Pfam PF13488 Glycine zipper 38 86 3.3E-11 T 21-04-2016 VFU_RS10560 257af863719ffad76d158a1d18bcd8a9 222 PRINTS PR01021 OMPA domain signature 118 140 7.4E-10 T 21-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VFU_RS10560 257af863719ffad76d158a1d18bcd8a9 222 PRINTS PR01021 OMPA domain signature 148 163 7.4E-10 T 21-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VFU_RS10560 257af863719ffad76d158a1d18bcd8a9 222 PRINTS PR01021 OMPA domain signature 163 179 7.4E-10 T 21-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VFU_RS10560 257af863719ffad76d158a1d18bcd8a9 222 PANTHER PTHR30128 24 222 4.1E-58 T 21-04-2016 VFU_RS10560 257af863719ffad76d158a1d18bcd8a9 222 Pfam PF00691 OmpA family 118 212 6.3E-21 T 21-04-2016 IPR006665 OmpA-like domain VFU_RS10560 257af863719ffad76d158a1d18bcd8a9 222 SUPERFAMILY SSF103088 106 221 4.71E-36 T 21-04-2016 IPR006665 OmpA-like domain VFU_RS11885 02b40cc391a099915a7eaeca0386b604 220 SMART SM00563 38 160 2.7E-24 T 21-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VFU_RS11885 02b40cc391a099915a7eaeca0386b604 220 PANTHER PTHR10434 1 183 5.6E-45 T 21-04-2016 VFU_RS11885 02b40cc391a099915a7eaeca0386b604 220 SUPERFAMILY SSF69593 13 209 4.45E-26 T 21-04-2016 VFU_RS11885 02b40cc391a099915a7eaeca0386b604 220 Gene3D G3DSA:3.40.1130.10 29 192 5.6E-15 T 21-04-2016 VFU_RS11885 02b40cc391a099915a7eaeca0386b604 220 PANTHER PTHR10434:SF21 1 183 5.6E-45 T 21-04-2016 VFU_RS11885 02b40cc391a099915a7eaeca0386b604 220 Pfam PF01553 Acyltransferase 26 157 2.2E-18 T 21-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VFU_RS04180 9fe07d2c57bcb31b5e9325002c45591a 419 Pfam PF01384 Phosphate transporter family 26 407 6.0E-119 T 21-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 VFU_RS04180 9fe07d2c57bcb31b5e9325002c45591a 419 PANTHER PTHR11101 1 418 1.0E-266 T 21-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 VFU_RS04180 9fe07d2c57bcb31b5e9325002c45591a 419 PANTHER PTHR11101:SF63 1 418 1.0E-266 T 21-04-2016 VFU_RS04890 81d5417e20ca627b3f87c1a20f6691ad 648 PANTHER PTHR21666:SF190 467 632 1.2E-81 T 21-04-2016 VFU_RS04890 81d5417e20ca627b3f87c1a20f6691ad 648 Pfam PF14718 Soluble lytic murein transglycosylase L domain 411 476 5.8E-22 T 21-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 VFU_RS04890 81d5417e20ca627b3f87c1a20f6691ad 648 Pfam PF01464 Transglycosylase SLT domain 489 599 7.5E-29 T 21-04-2016 IPR008258 Transglycosylase SLT domain 1 VFU_RS04890 81d5417e20ca627b3f87c1a20f6691ad 648 SUPERFAMILY SSF53955 483 642 8.63E-48 T 21-04-2016 IPR023346 Lysozyme-like domain VFU_RS04890 81d5417e20ca627b3f87c1a20f6691ad 648 Gene3D G3DSA:1.25.20.10 33 393 4.9E-106 T 21-04-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 VFU_RS04890 81d5417e20ca627b3f87c1a20f6691ad 648 Gene3D G3DSA:1.10.1240.20 409 476 3.1E-25 T 21-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 VFU_RS04890 81d5417e20ca627b3f87c1a20f6691ad 648 PANTHER PTHR21666 467 632 1.2E-81 T 21-04-2016 VFU_RS04890 81d5417e20ca627b3f87c1a20f6691ad 648 Gene3D G3DSA:1.10.530.10 478 638 1.6E-49 T 21-04-2016 VFU_RS04890 81d5417e20ca627b3f87c1a20f6691ad 648 SUPERFAMILY SSF48435 33 481 1.83E-121 T 21-04-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 VFU_RS14330 4475bffd9c49e2f4810a49ae57e03338 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.694 T 21-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid VFU_RS14330 4475bffd9c49e2f4810a49ae57e03338 130 SUPERFAMILY SSF54211 5 130 1.9E-48 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VFU_RS14330 4475bffd9c49e2f4810a49ae57e03338 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 21-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 VFU_RS14330 4475bffd9c49e2f4810a49ae57e03338 130 PANTHER PTHR21569 1 130 3.2E-73 T 21-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 VFU_RS14330 4475bffd9c49e2f4810a49ae57e03338 130 Gene3D G3DSA:3.30.230.10 4 130 1.1E-51 T 21-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VFU_RS14330 4475bffd9c49e2f4810a49ae57e03338 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 2.0E-47 T 21-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 VFU_RS08660 98cdeeb7a133f700d78ed4fadfd46159 537 Pfam PF00672 HAMP domain 185 252 3.7E-12 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS08660 98cdeeb7a133f700d78ed4fadfd46159 537 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 531 1.2E-43 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VFU_RS08660 98cdeeb7a133f700d78ed4fadfd46159 537 Gene3D G3DSA:1.10.287.950 286 501 2.4E-48 T 21-04-2016 VFU_RS08660 98cdeeb7a133f700d78ed4fadfd46159 537 SMART SM00304 203 256 6.0E-9 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS08660 98cdeeb7a133f700d78ed4fadfd46159 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 3 28 8.4E-23 T 21-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VFU_RS08660 98cdeeb7a133f700d78ed4fadfd46159 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 369 396 8.4E-23 T 21-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VFU_RS08660 98cdeeb7a133f700d78ed4fadfd46159 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 398 427 8.4E-23 T 21-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VFU_RS08660 98cdeeb7a133f700d78ed4fadfd46159 537 PANTHER PTHR32089:SF58 149 535 5.0E-176 T 21-04-2016 VFU_RS08660 98cdeeb7a133f700d78ed4fadfd46159 537 PANTHER PTHR32089 149 535 5.0E-176 T 21-04-2016 VFU_RS08660 98cdeeb7a133f700d78ed4fadfd46159 537 SMART SM00283 271 532 6.4E-49 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VFU_RS08660 98cdeeb7a133f700d78ed4fadfd46159 537 SUPERFAMILY SSF58104 224 533 8.24E-62 T 21-04-2016 VFU_RS10430 6e5cc414a8670f92367bd8fe0b99dc96 311 SUPERFAMILY SSF53850 90 289 7.24E-32 T 21-04-2016 VFU_RS10430 6e5cc414a8670f92367bd8fe0b99dc96 311 Gene3D G3DSA:3.40.190.10 167 262 7.1E-20 T 21-04-2016 VFU_RS10430 6e5cc414a8670f92367bd8fe0b99dc96 311 Pfam PF03466 LysR substrate binding domain 92 292 4.6E-16 T 21-04-2016 IPR005119 LysR, substrate-binding VFU_RS10430 6e5cc414a8670f92367bd8fe0b99dc96 311 SUPERFAMILY SSF46785 3 79 1.63E-15 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS10430 6e5cc414a8670f92367bd8fe0b99dc96 311 PANTHER PTHR30118 4 301 7.9E-53 T 21-04-2016 VFU_RS10430 6e5cc414a8670f92367bd8fe0b99dc96 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 4.0E-5 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS10430 6e5cc414a8670f92367bd8fe0b99dc96 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 4.0E-5 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS10430 6e5cc414a8670f92367bd8fe0b99dc96 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 4.0E-5 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS10430 6e5cc414a8670f92367bd8fe0b99dc96 311 Gene3D G3DSA:3.40.190.10 267 294 6.2E-16 T 21-04-2016 VFU_RS10430 6e5cc414a8670f92367bd8fe0b99dc96 311 Gene3D G3DSA:3.40.190.10 88 166 6.2E-16 T 21-04-2016 VFU_RS10430 6e5cc414a8670f92367bd8fe0b99dc96 311 Gene3D G3DSA:1.10.10.10 3 80 9.4E-22 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS10430 6e5cc414a8670f92367bd8fe0b99dc96 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 1.3E-14 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS12435 a776daff9b1e2ad32404cd2e9e528dc9 704 PANTHER PTHR30441 1 703 3.1E-217 T 21-04-2016 VFU_RS12435 a776daff9b1e2ad32404cd2e9e528dc9 704 Pfam PF05170 AsmA family 2 594 1.6E-138 T 21-04-2016 IPR007844 AsmA VFU_RS12435 a776daff9b1e2ad32404cd2e9e528dc9 704 PANTHER PTHR30441:SF4 1 703 3.1E-217 T 21-04-2016 VFU_RS02585 68c147853b0efaa41e4dfab34e0cab36 407 Pfam PF00482 Type II secretion system (T2SS), protein F 275 397 8.2E-25 T 21-04-2016 IPR018076 Type II secretion system F domain VFU_RS02585 68c147853b0efaa41e4dfab34e0cab36 407 Pfam PF00482 Type II secretion system (T2SS), protein F 73 195 4.4E-35 T 21-04-2016 IPR018076 Type II secretion system F domain VFU_RS02585 68c147853b0efaa41e4dfab34e0cab36 407 PANTHER PTHR30012:SF6 2 406 1.6E-254 T 21-04-2016 VFU_RS02585 68c147853b0efaa41e4dfab34e0cab36 407 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 404 9.2E-159 T 21-04-2016 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 VFU_RS02585 68c147853b0efaa41e4dfab34e0cab36 407 Gene3D G3DSA:1.20.1180.10 57 111 1.1E-4 T 21-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 VFU_RS02585 68c147853b0efaa41e4dfab34e0cab36 407 PANTHER PTHR30012 2 406 1.6E-254 T 21-04-2016 VFU_RS02585 68c147853b0efaa41e4dfab34e0cab36 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 370 384 1.2E-37 T 21-04-2016 IPR003004 GspF/PilC family VFU_RS02585 68c147853b0efaa41e4dfab34e0cab36 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 167 195 1.2E-37 T 21-04-2016 IPR003004 GspF/PilC family VFU_RS02585 68c147853b0efaa41e4dfab34e0cab36 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 386 405 1.2E-37 T 21-04-2016 IPR003004 GspF/PilC family VFU_RS02585 68c147853b0efaa41e4dfab34e0cab36 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 68 80 1.2E-37 T 21-04-2016 IPR003004 GspF/PilC family VFU_RS02585 68c147853b0efaa41e4dfab34e0cab36 407 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 167 195 - T 21-04-2016 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 VFU_RS00545 c4d5971396e17ed13cd9d19e81e71e83 410 PANTHER PTHR30576 215 409 6.3E-80 T 21-04-2016 VFU_RS00545 c4d5971396e17ed13cd9d19e81e71e83 410 Pfam PF02397 Bacterial sugar transferase 222 404 3.4E-54 T 21-04-2016 IPR003362 Bacterial sugar transferase VFU_RS00545 c4d5971396e17ed13cd9d19e81e71e83 410 PANTHER PTHR30576:SF0 215 409 6.3E-80 T 21-04-2016 VFU_RS11905 7350e64e4f7d7a26d70fa01c917066c4 237 Pfam PF13384 Homeodomain-like domain 153 197 4.2E-7 T 21-04-2016 VFU_RS11905 7350e64e4f7d7a26d70fa01c917066c4 237 Gene3D G3DSA:1.10.10.10 156 191 1.8E-4 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS11905 7350e64e4f7d7a26d70fa01c917066c4 237 Pfam PF00239 Resolvase, N terminal domain 4 131 3.2E-8 T 21-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VFU_RS11905 7350e64e4f7d7a26d70fa01c917066c4 237 SMART SM00857 3 142 8.2E-5 T 21-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VFU_RS11905 7350e64e4f7d7a26d70fa01c917066c4 237 SUPERFAMILY SSF53041 1 128 3.4E-11 T 21-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VFU_RS11905 7350e64e4f7d7a26d70fa01c917066c4 237 Gene3D G3DSA:3.40.50.1390 1 101 1.0E-9 T 21-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VFU_RS14490 175dea73c8153df277c952771a6783c6 162 SUPERFAMILY SSF142433 5 159 1.22E-54 T 21-04-2016 IPR008136 CinA, C-terminal VFU_RS14490 175dea73c8153df277c952771a6783c6 162 Gene3D G3DSA:3.90.950.20 4 160 8.7E-56 T 21-04-2016 IPR008136 CinA, C-terminal VFU_RS14490 175dea73c8153df277c952771a6783c6 162 PANTHER PTHR13939 7 159 8.3E-66 T 21-04-2016 VFU_RS14490 175dea73c8153df277c952771a6783c6 162 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 11 158 4.8E-48 T 21-04-2016 IPR008136 CinA, C-terminal VFU_RS14490 175dea73c8153df277c952771a6783c6 162 Pfam PF02464 Competence-damaged protein 5 158 9.0E-57 T 21-04-2016 IPR008136 CinA, C-terminal VFU_RS20285 8b3386eb8916c7393f12ac91b4e88408 206 Pfam PF05175 Methyltransferase small domain 46 205 6.7E-52 T 21-04-2016 IPR007848 Methyltransferase small domain GO:0008168 VFU_RS20285 8b3386eb8916c7393f12ac91b4e88408 206 PANTHER PTHR18895 1 205 2.3E-97 T 21-04-2016 VFU_RS20285 8b3386eb8916c7393f12ac91b4e88408 206 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 149 155 - T 21-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VFU_RS20285 8b3386eb8916c7393f12ac91b4e88408 206 PANTHER PTHR18895:SF6 1 205 2.3E-97 T 21-04-2016 VFU_RS20285 8b3386eb8916c7393f12ac91b4e88408 206 SUPERFAMILY SSF53335 44 194 1.3E-26 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS20285 8b3386eb8916c7393f12ac91b4e88408 206 Gene3D G3DSA:3.40.50.150 44 194 1.4E-22 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS09005 c9da009852734f45b50115d6002c686b 317 Gene3D G3DSA:3.40.50.720 1 144 2.1E-37 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS09005 c9da009852734f45b50115d6002c686b 317 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 309 3.0E-25 T 21-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 VFU_RS09005 c9da009852734f45b50115d6002c686b 317 SUPERFAMILY SSF56327 144 306 3.35E-43 T 21-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VFU_RS09005 c9da009852734f45b50115d6002c686b 317 PANTHER PTHR11540:SF3 1 306 5.9E-82 T 21-04-2016 VFU_RS09005 c9da009852734f45b50115d6002c686b 317 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 141 3.1E-30 T 21-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 VFU_RS09005 c9da009852734f45b50115d6002c686b 317 PRINTS PR00086 L-lactate dehydrogenase signature 170 183 2.2E-20 T 21-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 VFU_RS09005 c9da009852734f45b50115d6002c686b 317 PRINTS PR00086 L-lactate dehydrogenase signature 2 26 2.2E-20 T 21-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 VFU_RS09005 c9da009852734f45b50115d6002c686b 317 PRINTS PR00086 L-lactate dehydrogenase signature 140 158 2.2E-20 T 21-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 VFU_RS09005 c9da009852734f45b50115d6002c686b 317 PRINTS PR00086 L-lactate dehydrogenase signature 116 136 2.2E-20 T 21-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 VFU_RS09005 c9da009852734f45b50115d6002c686b 317 PRINTS PR00086 L-lactate dehydrogenase signature 27 51 2.2E-20 T 21-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 VFU_RS09005 c9da009852734f45b50115d6002c686b 317 PIRSF PIRSF000102 1 317 3.0E-89 T 21-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 VFU_RS09005 c9da009852734f45b50115d6002c686b 317 Gene3D G3DSA:3.90.110.10 145 310 8.4E-46 T 21-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VFU_RS09005 c9da009852734f45b50115d6002c686b 317 PANTHER PTHR11540 1 306 5.9E-82 T 21-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 VFU_RS09005 c9da009852734f45b50115d6002c686b 317 SUPERFAMILY SSF51735 1 141 1.95E-35 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS08910 50c6a464c65c4e767d4ec7462a8324c1 160 Pfam PF13673 Acetyltransferase (GNAT) domain 37 147 8.1E-14 T 21-04-2016 IPR000182 GNAT domain GO:0008080 VFU_RS08910 50c6a464c65c4e767d4ec7462a8324c1 160 SUPERFAMILY SSF55729 4 148 3.81E-26 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase VFU_RS08910 50c6a464c65c4e767d4ec7462a8324c1 160 PANTHER PTHR23091:SF122 1 146 5.7E-23 T 21-04-2016 VFU_RS08910 50c6a464c65c4e767d4ec7462a8324c1 160 Gene3D G3DSA:3.40.630.30 2 148 4.8E-27 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase VFU_RS08910 50c6a464c65c4e767d4ec7462a8324c1 160 PANTHER PTHR23091 1 146 5.7E-23 T 21-04-2016 VFU_RS14305 a11344f668056c5e656eb10fc8760687 211 PANTHER PTHR11260:SF44 9 210 3.3E-121 T 21-04-2016 VFU_RS14305 a11344f668056c5e656eb10fc8760687 211 SUPERFAMILY SSF47616 82 208 1.71E-23 T 21-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like VFU_RS14305 a11344f668056c5e656eb10fc8760687 211 Pfam PF00043 Glutathione S-transferase, C-terminal domain 110 194 4.2E-8 T 21-04-2016 IPR004046 Glutathione S-transferase, C-terminal VFU_RS14305 a11344f668056c5e656eb10fc8760687 211 Gene3D G3DSA:3.40.30.10 7 100 4.8E-29 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS14305 a11344f668056c5e656eb10fc8760687 211 PANTHER PTHR11260 9 210 3.3E-121 T 21-04-2016 VFU_RS14305 a11344f668056c5e656eb10fc8760687 211 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 87 3.9E-17 T 21-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VFU_RS14305 a11344f668056c5e656eb10fc8760687 211 SUPERFAMILY SSF52833 11 110 3.73E-22 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS14305 a11344f668056c5e656eb10fc8760687 211 Gene3D G3DSA:1.20.1050.10 101 208 3.9E-14 T 21-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like VFU_RS15115 39fdf96626c89df5b955460dcaac5bd7 295 PIRSF PIRSF038471 2 284 2.5E-79 T 21-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 VFU_RS15115 39fdf96626c89df5b955460dcaac5bd7 295 PANTHER PTHR34138:SF1 1 284 2.9E-86 T 21-04-2016 VFU_RS15115 39fdf96626c89df5b955460dcaac5bd7 295 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 280 4.6E-88 T 21-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 VFU_RS15115 39fdf96626c89df5b955460dcaac5bd7 295 Pfam PF04085 rod shape-determining protein MreC 123 269 5.2E-40 T 21-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 VFU_RS15115 39fdf96626c89df5b955460dcaac5bd7 295 PANTHER PTHR34138 1 284 2.9E-86 T 21-04-2016 VFU_RS04350 47323ea566a7675443ed6ef26979544d 305 PANTHER PTHR24220 5 304 1.9E-172 T 21-04-2016 VFU_RS04350 47323ea566a7675443ed6ef26979544d 305 Pfam PF00005 ABC transporter 20 164 3.3E-34 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS04350 47323ea566a7675443ed6ef26979544d 305 Gene3D G3DSA:3.40.50.300 3 225 1.3E-69 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS04350 47323ea566a7675443ed6ef26979544d 305 SMART SM00382 29 212 8.7E-14 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS04350 47323ea566a7675443ed6ef26979544d 305 SUPERFAMILY SSF52540 3 233 4.89E-63 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS04350 47323ea566a7675443ed6ef26979544d 305 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS04350 47323ea566a7675443ed6ef26979544d 305 PANTHER PTHR24220:SF305 5 304 1.9E-172 T 21-04-2016 VFU_RS06170 c5ac0b23521ef34fed7fc2d33baac47a 299 SUPERFAMILY SSF53807 22 297 1.28E-71 T 21-04-2016 VFU_RS06170 c5ac0b23521ef34fed7fc2d33baac47a 299 Gene3D G3DSA:3.40.50.1980 188 295 4.7E-27 T 21-04-2016 VFU_RS06170 c5ac0b23521ef34fed7fc2d33baac47a 299 Gene3D G3DSA:3.40.50.1980 13 184 3.5E-43 T 21-04-2016 VFU_RS06170 c5ac0b23521ef34fed7fc2d33baac47a 299 PANTHER PTHR30477:SF1 1 272 1.1E-72 T 21-04-2016 VFU_RS06170 c5ac0b23521ef34fed7fc2d33baac47a 299 Pfam PF01297 Zinc-uptake complex component A periplasmic 23 292 2.4E-55 T 21-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 VFU_RS06170 c5ac0b23521ef34fed7fc2d33baac47a 299 PANTHER PTHR30477 1 272 1.1E-72 T 21-04-2016 VFU_RS06170 c5ac0b23521ef34fed7fc2d33baac47a 299 PRINTS PR00691 Adhesin B signature 284 299 6.66E-6 T 21-04-2016 IPR006129 Adhesin B GO:0007155 VFU_RS06170 c5ac0b23521ef34fed7fc2d33baac47a 299 PRINTS PR00691 Adhesin B signature 127 146 6.66E-6 T 21-04-2016 IPR006129 Adhesin B GO:0007155 VFU_RS06170 c5ac0b23521ef34fed7fc2d33baac47a 299 PRINTS PR00691 Adhesin B signature 64 83 6.66E-6 T 21-04-2016 IPR006129 Adhesin B GO:0007155 VFU_RS06170 c5ac0b23521ef34fed7fc2d33baac47a 299 PRINTS PR00691 Adhesin B signature 45 63 6.66E-6 T 21-04-2016 IPR006129 Adhesin B GO:0007155 VFU_RS06170 c5ac0b23521ef34fed7fc2d33baac47a 299 PRINTS PR00690 Adhesin family signature 64 81 4.22E-5 T 21-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 VFU_RS06170 c5ac0b23521ef34fed7fc2d33baac47a 299 PRINTS PR00690 Adhesin family signature 51 64 4.22E-5 T 21-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 VFU_RS06170 c5ac0b23521ef34fed7fc2d33baac47a 299 PRINTS PR00690 Adhesin family signature 236 254 4.22E-5 T 21-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 VFU_RS06170 c5ac0b23521ef34fed7fc2d33baac47a 299 PRINTS PR00690 Adhesin family signature 183 204 4.22E-5 T 21-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 VFU_RS13350 204260245814f05e03a8b03e3851a5d4 171 Pfam PF00419 Fimbrial protein 27 171 4.5E-13 T 21-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 VFU_RS13350 204260245814f05e03a8b03e3851a5d4 171 PANTHER PTHR33420 1 171 1.3E-29 T 21-04-2016 VFU_RS13350 204260245814f05e03a8b03e3851a5d4 171 Gene3D G3DSA:2.60.40.1090 25 171 1.1E-35 T 21-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 VFU_RS13350 204260245814f05e03a8b03e3851a5d4 171 SUPERFAMILY SSF49401 25 171 3.38E-32 T 21-04-2016 IPR008966 Adhesion domain VFU_RS13350 204260245814f05e03a8b03e3851a5d4 171 PANTHER PTHR33420:SF12 1 171 1.3E-29 T 21-04-2016 VFU_RS11295 9f59d6d4e66342f1df01ab3649bed7c2 287 PIRSF PIRSF001359 1 284 4.3E-110 T 21-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VFU_RS11295 9f59d6d4e66342f1df01ab3649bed7c2 287 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 283 9.3E-102 T 21-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VFU_RS11295 9f59d6d4e66342f1df01ab3649bed7c2 287 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 21-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VFU_RS11295 9f59d6d4e66342f1df01ab3649bed7c2 287 Pfam PF01116 Fructose-bisphosphate aldolase class-II 6 283 3.4E-99 T 21-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VFU_RS11295 9f59d6d4e66342f1df01ab3649bed7c2 287 TIGRFAM TIGR01858 tag_bisphos_ald: class II aldolase, tagatose bisphosphate family 3 283 1.0E-146 T 21-04-2016 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY GO:0005975|GO:0008270|GO:0009025 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 VFU_RS11295 9f59d6d4e66342f1df01ab3649bed7c2 287 PANTHER PTHR30304:SF5 1 287 1.8E-150 T 21-04-2016 VFU_RS11295 9f59d6d4e66342f1df01ab3649bed7c2 287 SUPERFAMILY SSF51569 3 283 2.34E-100 T 21-04-2016 VFU_RS11295 9f59d6d4e66342f1df01ab3649bed7c2 287 Gene3D G3DSA:3.20.20.70 1 284 9.0E-112 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS11295 9f59d6d4e66342f1df01ab3649bed7c2 287 PANTHER PTHR30304 1 287 1.8E-150 T 21-04-2016 VFU_RS02290 6b96e2e393164b5796507521595d7ce0 111 Gene3D G3DSA:1.10.10.10 5 82 3.7E-27 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS02290 6b96e2e393164b5796507521595d7ce0 111 SUPERFAMILY SSF46785 5 85 2.31E-23 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS02290 6b96e2e393164b5796507521595d7ce0 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 38 8.1E-21 T 21-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VFU_RS02290 6b96e2e393164b5796507521595d7ce0 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 8.1E-21 T 21-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VFU_RS02290 6b96e2e393164b5796507521595d7ce0 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 8.1E-21 T 21-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VFU_RS02290 6b96e2e393164b5796507521595d7ce0 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 8.1E-21 T 21-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VFU_RS02290 6b96e2e393164b5796507521595d7ce0 111 Pfam PF01022 Bacterial regulatory protein, arsR family 12 56 2.8E-11 T 21-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VFU_RS02290 6b96e2e393164b5796507521595d7ce0 111 SMART SM00418 5 83 3.5E-25 T 21-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VFU_RS02290 6b96e2e393164b5796507521595d7ce0 111 PANTHER PTHR33154 5 99 4.7E-19 T 21-04-2016 VFU_RS15345 f79bc29119949008634bcd97017e600a 361 TIGRFAM TIGR00492 alr: alanine racemase 3 356 2.7E-130 T 21-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VFU_RS15345 f79bc29119949008634bcd97017e600a 361 Gene3D G3DSA:2.40.37.10 213 359 1.4E-55 T 21-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 VFU_RS15345 f79bc29119949008634bcd97017e600a 361 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 21-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VFU_RS15345 f79bc29119949008634bcd97017e600a 361 PRINTS PR00992 Alanine racemase signature 155 166 1.5E-70 T 21-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VFU_RS15345 f79bc29119949008634bcd97017e600a 361 PRINTS PR00992 Alanine racemase signature 60 78 1.5E-70 T 21-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VFU_RS15345 f79bc29119949008634bcd97017e600a 361 PRINTS PR00992 Alanine racemase signature 192 219 1.5E-70 T 21-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VFU_RS15345 f79bc29119949008634bcd97017e600a 361 PRINTS PR00992 Alanine racemase signature 249 264 1.5E-70 T 21-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VFU_RS15345 f79bc29119949008634bcd97017e600a 361 PRINTS PR00992 Alanine racemase signature 287 304 1.5E-70 T 21-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VFU_RS15345 f79bc29119949008634bcd97017e600a 361 PRINTS PR00992 Alanine racemase signature 26 42 1.5E-70 T 21-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VFU_RS15345 f79bc29119949008634bcd97017e600a 361 PRINTS PR00992 Alanine racemase signature 120 132 1.5E-70 T 21-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VFU_RS15345 f79bc29119949008634bcd97017e600a 361 PRINTS PR00992 Alanine racemase signature 266 281 1.5E-70 T 21-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VFU_RS15345 f79bc29119949008634bcd97017e600a 361 PRINTS PR00992 Alanine racemase signature 339 352 1.5E-70 T 21-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VFU_RS15345 f79bc29119949008634bcd97017e600a 361 Pfam PF00842 Alanine racemase, C-terminal domain 233 356 2.4E-39 T 21-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VFU_RS15345 f79bc29119949008634bcd97017e600a 361 PANTHER PTHR30511 1 361 1.3E-236 T 21-04-2016 VFU_RS15345 f79bc29119949008634bcd97017e600a 361 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 4.2E-72 T 21-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VFU_RS15345 f79bc29119949008634bcd97017e600a 361 Hamap MF_01201 Alanine racemase. 1 357 35.452 T 21-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VFU_RS15345 f79bc29119949008634bcd97017e600a 361 SUPERFAMILY SSF51419 8 234 1.27E-70 T 21-04-2016 IPR029066 PLP-binding barrel VFU_RS15345 f79bc29119949008634bcd97017e600a 361 SUPERFAMILY SSF50621 227 358 6.28E-47 T 21-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 VFU_RS15345 f79bc29119949008634bcd97017e600a 361 PANTHER PTHR30511:SF4 1 361 1.3E-236 T 21-04-2016 VFU_RS15345 f79bc29119949008634bcd97017e600a 361 SMART SM01005 233 357 5.9E-66 T 21-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VFU_RS15345 f79bc29119949008634bcd97017e600a 361 Gene3D G3DSA:3.20.20.10 10 212 1.1E-73 T 21-04-2016 IPR029066 PLP-binding barrel VFU_RS03010 bb7f88e9400c055dd39d5af367189c66 127 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 1 127 26.593 T 21-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 VFU_RS03010 bb7f88e9400c055dd39d5af367189c66 127 SUPERFAMILY SSF81343 1 127 6.32E-51 T 21-04-2016 VFU_RS03010 bb7f88e9400c055dd39d5af367189c66 127 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 7 127 1.0E-50 T 21-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 VFU_RS03010 bb7f88e9400c055dd39d5af367189c66 127 Pfam PF02300 Fumarate reductase subunit C 2 127 1.5E-48 T 21-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 VFU_RS03010 bb7f88e9400c055dd39d5af367189c66 127 PIRSF PIRSF000180 1 127 1.8E-53 T 21-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 VFU_RS03010 bb7f88e9400c055dd39d5af367189c66 127 Gene3D G3DSA:1.20.1300.10 1 127 4.7E-52 T 21-04-2016 VFU_RS12470 7f7c078e5864a4f544b236babee6e614 138 SUPERFAMILY SSF54631 1 126 3.28E-33 T 21-04-2016 VFU_RS12470 7f7c078e5864a4f544b236babee6e614 138 Gene3D G3DSA:3.10.580.10 1 128 4.3E-30 T 21-04-2016 VFU_RS12470 7f7c078e5864a4f544b236babee6e614 138 SMART SM00116 13 61 0.025 T 21-04-2016 IPR000644 CBS domain VFU_RS12470 7f7c078e5864a4f544b236babee6e614 138 SMART SM00116 80 127 1.5E-8 T 21-04-2016 IPR000644 CBS domain VFU_RS12470 7f7c078e5864a4f544b236babee6e614 138 Pfam PF00571 CBS domain 73 126 5.6E-13 T 21-04-2016 IPR000644 CBS domain VFU_RS12470 7f7c078e5864a4f544b236babee6e614 138 Pfam PF00571 CBS domain 6 60 3.7E-10 T 21-04-2016 IPR000644 CBS domain VFU_RS12470 7f7c078e5864a4f544b236babee6e614 138 PANTHER PTHR11911 1 126 2.3E-21 T 21-04-2016 VFU_RS03475 157343f98f71c15c54b4f8a24c032e25 206 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 30 202 38.013 T 21-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 VFU_RS03475 157343f98f71c15c54b4f8a24c032e25 206 Pfam PF01583 Adenylylsulphate kinase 31 182 2.6E-71 T 21-04-2016 VFU_RS03475 157343f98f71c15c54b4f8a24c032e25 206 Gene3D G3DSA:3.40.50.300 9 205 3.5E-89 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS03475 157343f98f71c15c54b4f8a24c032e25 206 SUPERFAMILY SSF52540 26 201 3.94E-38 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS03475 157343f98f71c15c54b4f8a24c032e25 206 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 14 195 1.5E-81 T 21-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 VFU_RS03475 157343f98f71c15c54b4f8a24c032e25 206 PANTHER PTHR11055 11 204 5.8E-128 T 21-04-2016 VFU_RS11730 6d031b1032ab26929c4f9dc896398c9f 260 SUPERFAMILY SSF47240 109 255 9.34E-73 T 21-04-2016 IPR009078 Ferritin-like superfamily VFU_RS11730 6d031b1032ab26929c4f9dc896398c9f 260 SUPERFAMILY SSF47240 11 61 9.34E-73 T 21-04-2016 IPR009078 Ferritin-like superfamily VFU_RS11730 6d031b1032ab26929c4f9dc896398c9f 260 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 9 252 9.6E-119 T 21-04-2016 IPR010386 tRNA-hydroxylase MiaE KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.-|UniPathway: UPA00729 VFU_RS11730 6d031b1032ab26929c4f9dc896398c9f 260 PANTHER PTHR42637:SF1 1 260 8.7E-109 T 21-04-2016 VFU_RS11730 6d031b1032ab26929c4f9dc896398c9f 260 Gene3D G3DSA:1.20.1260.10 109 257 2.6E-88 T 21-04-2016 IPR012347 Ferritin-related VFU_RS11730 6d031b1032ab26929c4f9dc896398c9f 260 Gene3D G3DSA:1.20.1260.10 8 61 2.6E-88 T 21-04-2016 IPR012347 Ferritin-related VFU_RS11730 6d031b1032ab26929c4f9dc896398c9f 260 PIRSF PIRSF020736 2 257 3.8E-92 T 21-04-2016 IPR010386 tRNA-hydroxylase MiaE KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.-|UniPathway: UPA00729 VFU_RS11730 6d031b1032ab26929c4f9dc896398c9f 260 PANTHER PTHR42637 1 260 8.7E-109 T 21-04-2016 VFU_RS05440 2832378e08951fc820206bfed2d0804e 243 PANTHER PTHR40590 1 242 3.1E-57 T 21-04-2016 VFU_RS05440 2832378e08951fc820206bfed2d0804e 243 Pfam PF01963 TraB family 1 231 5.7E-40 T 21-04-2016 IPR002816 Pheromone shutdown, TraB VFU_RS14905 0fc3395a08381afa3bbefbace686bda6 338 Gene3D G3DSA:1.10.3470.10 6 334 9.5E-94 T 21-04-2016 IPR029022 ABC transporter, BtuC-like VFU_RS14905 0fc3395a08381afa3bbefbace686bda6 338 PANTHER PTHR30472:SF34 13 337 1.8E-127 T 21-04-2016 VFU_RS14905 0fc3395a08381afa3bbefbace686bda6 338 SUPERFAMILY SSF81345 4 329 1.24E-69 T 21-04-2016 IPR029022 ABC transporter, BtuC-like VFU_RS14905 0fc3395a08381afa3bbefbace686bda6 338 Pfam PF01032 FecCD transport family 18 329 1.1E-80 T 21-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 VFU_RS14905 0fc3395a08381afa3bbefbace686bda6 338 PANTHER PTHR30472 13 337 1.8E-127 T 21-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 VFU_RS07610 81470cb3365b6164b3224541c041269c 321 PANTHER PTHR35271 1 321 4.0E-73 T 21-04-2016 VFU_RS07610 81470cb3365b6164b3224541c041269c 321 Gene3D G3DSA:3.40.50.2300 156 287 1.7E-46 T 21-04-2016 VFU_RS07610 81470cb3365b6164b3224541c041269c 321 SUPERFAMILY SSF53822 43 276 8.84E-19 T 21-04-2016 IPR028082 Periplasmic binding protein-like I VFU_RS07610 81470cb3365b6164b3224541c041269c 321 Pfam PF04392 ABC transporter substrate binding protein 29 321 2.7E-118 T 21-04-2016 IPR007487 ABC transporter, substrate-binding protein VFU_RS07610 81470cb3365b6164b3224541c041269c 321 Gene3D G3DSA:3.40.50.2300 27 155 2.7E-59 T 21-04-2016 VFU_RS13490 369c8d51536d607731b8d88791c11da6 301 Pfam PF13413 Helix-turn-helix domain 21 78 1.3E-17 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VFU_RS13490 369c8d51536d607731b8d88791c11da6 301 SMART SM00530 20 81 8.5E-5 T 21-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VFU_RS13490 369c8d51536d607731b8d88791c11da6 301 Pfam PF13464 Domain of unknown function (DUF4115) 227 300 1.5E-24 T 21-04-2016 IPR025194 Domain of unknown function DUF4115 VFU_RS13490 369c8d51536d607731b8d88791c11da6 301 Gene3D G3DSA:1.10.260.40 12 87 2.2E-11 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VFU_RS13490 369c8d51536d607731b8d88791c11da6 301 SUPERFAMILY SSF47413 16 83 2.41E-8 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VFU_RS13490 369c8d51536d607731b8d88791c11da6 301 PANTHER PTHR34475:SF1 4 301 2.7E-46 T 21-04-2016 VFU_RS13490 369c8d51536d607731b8d88791c11da6 301 PANTHER PTHR34475 4 301 2.7E-46 T 21-04-2016 VFU_RS09030 a9f99e203292457d10531b2bd8e5e76d 181 PANTHER PTHR30625 12 179 4.3E-31 T 21-04-2016 VFU_RS09030 a9f99e203292457d10531b2bd8e5e76d 181 Pfam PF01618 MotA/TolQ/ExbB proton channel family 70 174 4.0E-21 T 21-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 VFU_RS05885 60b2f22c2e87dae7fdaf14d7a0eb2e47 376 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 375 1.8E-25 T 21-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VFU_RS05885 60b2f22c2e87dae7fdaf14d7a0eb2e47 376 PRINTS PR00207 Flagellin signature 111 134 1.4E-27 T 21-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VFU_RS05885 60b2f22c2e87dae7fdaf14d7a0eb2e47 376 PRINTS PR00207 Flagellin signature 37 54 1.4E-27 T 21-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VFU_RS05885 60b2f22c2e87dae7fdaf14d7a0eb2e47 376 PRINTS PR00207 Flagellin signature 76 95 1.4E-27 T 21-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VFU_RS05885 60b2f22c2e87dae7fdaf14d7a0eb2e47 376 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 5.0E-44 T 21-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VFU_RS05885 60b2f22c2e87dae7fdaf14d7a0eb2e47 376 Gene3D G3DSA:1.20.1330.10 54 171 2.5E-62 T 21-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VFU_RS05885 60b2f22c2e87dae7fdaf14d7a0eb2e47 376 Gene3D G3DSA:1.20.1330.10 278 332 2.5E-62 T 21-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VFU_RS05885 60b2f22c2e87dae7fdaf14d7a0eb2e47 376 Pfam PF07196 Flagellin hook IN motif 193 247 8.0E-12 T 21-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VFU_RS05885 60b2f22c2e87dae7fdaf14d7a0eb2e47 376 PANTHER PTHR30244 2 375 8.7E-163 T 21-04-2016 VFU_RS05885 60b2f22c2e87dae7fdaf14d7a0eb2e47 376 PANTHER PTHR30244:SF1 2 375 8.7E-163 T 21-04-2016 VFU_RS05885 60b2f22c2e87dae7fdaf14d7a0eb2e47 376 SUPERFAMILY SSF64518 1 375 1.44E-96 T 21-04-2016 VFU_RS06255 abd0af4f59c08d63d2af0dc04eee9dc6 376 Gene3D G3DSA:3.40.50.180 183 370 1.3E-72 T 21-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VFU_RS06255 abd0af4f59c08d63d2af0dc04eee9dc6 376 SMART SM00448 3 126 7.8E-26 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS06255 abd0af4f59c08d63d2af0dc04eee9dc6 376 Pfam PF00072 Response regulator receiver domain 5 109 1.0E-23 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS06255 abd0af4f59c08d63d2af0dc04eee9dc6 376 Gene3D G3DSA:3.40.50.2300 2 109 7.1E-31 T 21-04-2016 VFU_RS06255 abd0af4f59c08d63d2af0dc04eee9dc6 376 PANTHER PTHR24421 1 373 4.7E-175 T 21-04-2016 VFU_RS06255 abd0af4f59c08d63d2af0dc04eee9dc6 376 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 374 39.041 T 21-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VFU_RS06255 abd0af4f59c08d63d2af0dc04eee9dc6 376 Pfam PF01339 CheB methylesterase 191 368 3.7E-58 T 21-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VFU_RS06255 abd0af4f59c08d63d2af0dc04eee9dc6 376 SUPERFAMILY SSF52738 185 370 4.45E-63 T 21-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VFU_RS06255 abd0af4f59c08d63d2af0dc04eee9dc6 376 SUPERFAMILY SSF52172 2 109 5.83E-27 T 21-04-2016 IPR011006 CheY-like superfamily VFU_RS06255 abd0af4f59c08d63d2af0dc04eee9dc6 376 PIRSF PIRSF000876 1 374 1.8E-127 T 21-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VFU_RS06255 abd0af4f59c08d63d2af0dc04eee9dc6 376 PANTHER PTHR24421:SF16 1 373 4.7E-175 T 21-04-2016 VFU_RS12810 2763dc14b0d9370988d35bb886b31741 474 SUPERFAMILY SSF102114 123 374 7.72E-61 T 21-04-2016 VFU_RS12810 2763dc14b0d9370988d35bb886b31741 474 Pfam PF04055 Radical SAM superfamily 151 325 2.1E-26 T 21-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VFU_RS12810 2763dc14b0d9370988d35bb886b31741 474 SMART SM00729 147 367 1.6E-63 T 21-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 VFU_RS12810 2763dc14b0d9370988d35bb886b31741 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 21-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 VFU_RS12810 2763dc14b0d9370988d35bb886b31741 474 PANTHER PTHR11918 1 474 1.2E-231 T 21-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein VFU_RS12810 2763dc14b0d9370988d35bb886b31741 474 Pfam PF01938 TRAM domain 379 440 2.7E-16 T 21-04-2016 IPR002792 TRAM domain VFU_RS12810 2763dc14b0d9370988d35bb886b31741 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 7.9E-150 T 21-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 VFU_RS12810 2763dc14b0d9370988d35bb886b31741 474 PANTHER PTHR11918:SF43 1 474 1.2E-231 T 21-04-2016 VFU_RS12810 2763dc14b0d9370988d35bb886b31741 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 72.396 T 21-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 VFU_RS12810 2763dc14b0d9370988d35bb886b31741 474 Gene3D G3DSA:3.80.30.20 146 378 4.0E-77 T 21-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe VFU_RS12810 2763dc14b0d9370988d35bb886b31741 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 1.6E-29 T 21-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 VFU_RS12810 2763dc14b0d9370988d35bb886b31741 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 1.3E-198 T 21-04-2016 VFU_RS06000 13ed9223e713a5268014712b5b90ac9b 184 SUPERFAMILY SSF160443 103 179 3.53E-12 T 21-04-2016 IPR002625 Smr domain VFU_RS06000 13ed9223e713a5268014712b5b90ac9b 184 PANTHER PTHR35562:SF1 4 183 1.5E-99 T 21-04-2016 VFU_RS06000 13ed9223e713a5268014712b5b90ac9b 184 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 181 37.901 T 21-04-2016 IPR022990 Uncharacterised protein family UPF0115 VFU_RS06000 13ed9223e713a5268014712b5b90ac9b 184 Pfam PF01713 Smr domain 105 179 8.9E-19 T 21-04-2016 IPR002625 Smr domain VFU_RS06000 13ed9223e713a5268014712b5b90ac9b 184 SMART SM00463 102 180 1.9E-17 T 21-04-2016 IPR002625 Smr domain VFU_RS06000 13ed9223e713a5268014712b5b90ac9b 184 PANTHER PTHR35562 4 183 1.5E-99 T 21-04-2016 VFU_RS02340 0f594a740f31f4269a24cc4e562edb43 195 PANTHER PTHR33508:SF4 1 192 3.4E-81 T 21-04-2016 VFU_RS02340 0f594a740f31f4269a24cc4e562edb43 195 PANTHER PTHR33508 1 192 3.4E-81 T 21-04-2016 VFU_RS02340 0f594a740f31f4269a24cc4e562edb43 195 Pfam PF01914 MarC family integral membrane protein 3 191 6.5E-54 T 21-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VFU_RS02340 0f594a740f31f4269a24cc4e562edb43 195 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 6 189 2.5E-29 T 21-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VFU_RS01925 0b7ae86e17be9f05135e06e1e2e77548 269 PANTHER PTHR10953 1 250 6.3E-101 T 21-04-2016 VFU_RS01925 0b7ae86e17be9f05135e06e1e2e77548 269 Gene3D G3DSA:3.40.50.720 3 247 2.8E-64 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS01925 0b7ae86e17be9f05135e06e1e2e77548 269 PANTHER PTHR10953:SF158 1 250 6.3E-101 T 21-04-2016 VFU_RS01925 0b7ae86e17be9f05135e06e1e2e77548 269 SUPERFAMILY SSF69572 2 247 2.09E-73 T 21-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VFU_RS01925 0b7ae86e17be9f05135e06e1e2e77548 269 Pfam PF00899 ThiF family 10 247 6.6E-57 T 21-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VFU_RS08720 8a2a6f246a6e2e69ece1d6971383657e 455 Gene3D G3DSA:3.60.120.10 12 453 1.3E-147 T 21-04-2016 IPR005801 ADC synthase GO:0009058 VFU_RS08720 8a2a6f246a6e2e69ece1d6971383657e 455 PANTHER PTHR11236:SF18 1 455 4.9E-160 T 21-04-2016 VFU_RS08720 8a2a6f246a6e2e69ece1d6971383657e 455 Pfam PF00425 chorismate binding enzyme 193 445 1.3E-92 T 21-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal VFU_RS08720 8a2a6f246a6e2e69ece1d6971383657e 455 PRINTS PR00095 Anthranilate synthase component I signature 293 306 3.0E-17 T 21-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VFU_RS08720 8a2a6f246a6e2e69ece1d6971383657e 455 PRINTS PR00095 Anthranilate synthase component I signature 402 416 3.0E-17 T 21-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VFU_RS08720 8a2a6f246a6e2e69ece1d6971383657e 455 PRINTS PR00095 Anthranilate synthase component I signature 307 320 3.0E-17 T 21-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VFU_RS08720 8a2a6f246a6e2e69ece1d6971383657e 455 PRINTS PR00095 Anthranilate synthase component I signature 387 401 3.0E-17 T 21-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VFU_RS08720 8a2a6f246a6e2e69ece1d6971383657e 455 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 110 447 1.4E-120 T 21-04-2016 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543|UniPathway: UPA00077 VFU_RS08720 8a2a6f246a6e2e69ece1d6971383657e 455 SUPERFAMILY SSF56322 9 453 1.7E-140 T 21-04-2016 IPR005801 ADC synthase GO:0009058 VFU_RS08720 8a2a6f246a6e2e69ece1d6971383657e 455 PANTHER PTHR11236 1 455 4.9E-160 T 21-04-2016 VFU_RS08720 8a2a6f246a6e2e69ece1d6971383657e 455 Pfam PF04715 Anthranilate synthase component I, N terminal region 23 155 1.9E-28 T 21-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VFU_RS00340 73982390c66219782b4672820073a08e 89 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 79 5.1E-15 T 21-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VFU_RS00340 73982390c66219782b4672820073a08e 89 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 21-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VFU_RS00340 73982390c66219782b4672820073a08e 89 Gene3D G3DSA:3.10.20.30 3 86 3.2E-25 T 21-04-2016 IPR012675 Beta-grasp domain VFU_RS00340 73982390c66219782b4672820073a08e 89 SUPERFAMILY SSF54292 1 87 1.04E-26 T 21-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VFU_RS11930 ab2585d493bb67e5af3e0ce7ae2d61dd 344 Pfam PF13343 Bacterial extracellular solute-binding protein 90 316 1.2E-30 T 21-04-2016 VFU_RS11930 ab2585d493bb67e5af3e0ce7ae2d61dd 344 PANTHER PTHR30006 19 342 2.0E-123 T 21-04-2016 VFU_RS11930 ab2585d493bb67e5af3e0ce7ae2d61dd 344 Gene3D G3DSA:3.40.190.10 130 269 3.1E-48 T 21-04-2016 VFU_RS11930 ab2585d493bb67e5af3e0ce7ae2d61dd 344 PANTHER PTHR30006:SF2 19 342 2.0E-123 T 21-04-2016 VFU_RS11930 ab2585d493bb67e5af3e0ce7ae2d61dd 344 PIRSF PIRSF002825 3 341 8.9E-67 T 21-04-2016 IPR026045 Ferric binding protein VFU_RS11930 ab2585d493bb67e5af3e0ce7ae2d61dd 344 SUPERFAMILY SSF53850 25 333 1.48E-67 T 21-04-2016 VFU_RS11930 ab2585d493bb67e5af3e0ce7ae2d61dd 344 Gene3D G3DSA:3.40.190.10 270 320 5.8E-34 T 21-04-2016 VFU_RS11930 ab2585d493bb67e5af3e0ce7ae2d61dd 344 Gene3D G3DSA:3.40.190.10 8 124 5.8E-34 T 21-04-2016 VFU_RS07705 57d577c1b057cc6877c408337eeb1819 113 Pfam PF13806 Rieske-like [2Fe-2S] domain 4 105 1.8E-31 T 21-04-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 VFU_RS07705 57d577c1b057cc6877c408337eeb1819 113 SUPERFAMILY SSF50022 3 109 1.08E-30 T 21-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 VFU_RS07705 57d577c1b057cc6877c408337eeb1819 113 PANTHER PTHR40562 3 111 3.2E-17 T 21-04-2016 VFU_RS07705 57d577c1b057cc6877c408337eeb1819 113 Gene3D G3DSA:2.102.10.10 3 109 3.0E-36 T 21-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 VFU_RS07705 57d577c1b057cc6877c408337eeb1819 113 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 2 106 5.5E-29 T 21-04-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 VFU_RS07575 c3bf7af434bf0dbcdaeb1135ac18f44b 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 240 326 1.9E-27 T 21-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VFU_RS07575 c3bf7af434bf0dbcdaeb1135ac18f44b 330 SUPERFAMILY SSF52540 9 261 1.33E-73 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS07575 c3bf7af434bf0dbcdaeb1135ac18f44b 330 Pfam PF00005 ABC transporter 38 189 4.1E-34 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS07575 c3bf7af434bf0dbcdaeb1135ac18f44b 330 Gene3D G3DSA:3.40.50.300 5 265 2.5E-81 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS07575 c3bf7af434bf0dbcdaeb1135ac18f44b 330 SMART SM00382 46 239 1.3E-17 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS07575 c3bf7af434bf0dbcdaeb1135ac18f44b 330 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS07575 c3bf7af434bf0dbcdaeb1135ac18f44b 330 PANTHER PTHR24220:SF544 10 326 7.7E-196 T 21-04-2016 VFU_RS07575 c3bf7af434bf0dbcdaeb1135ac18f44b 330 PANTHER PTHR24220 10 326 7.7E-196 T 21-04-2016 VFU_RS07575 c3bf7af434bf0dbcdaeb1135ac18f44b 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 241 308 2.3E-20 T 21-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VFU_RS03430 c8a8caadec5780ba1aa4a92671f79aad 293 SUPERFAMILY SSF103481 178 271 4.84E-14 T 21-04-2016 VFU_RS03430 c8a8caadec5780ba1aa4a92671f79aad 293 Pfam PF00892 EamA-like transporter family 7 137 6.6E-13 T 21-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VFU_RS03430 c8a8caadec5780ba1aa4a92671f79aad 293 Pfam PF00892 EamA-like transporter family 143 268 4.0E-11 T 21-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VFU_RS03430 c8a8caadec5780ba1aa4a92671f79aad 293 SUPERFAMILY SSF103481 40 141 9.68E-14 T 21-04-2016 VFU_RS03430 c8a8caadec5780ba1aa4a92671f79aad 293 PANTHER PTHR22911 1 273 1.1E-89 T 21-04-2016 VFU_RS03430 c8a8caadec5780ba1aa4a92671f79aad 293 PANTHER PTHR22911:SF70 1 273 1.1E-89 T 21-04-2016 VFU_RS05140 9e30593de123ff597250bf606309f07b 423 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 272 - T 21-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VFU_RS05140 9e30593de123ff597250bf606309f07b 423 Pfam PF00202 Aminotransferase class-III 20 417 2.7E-128 T 21-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VFU_RS05140 9e30593de123ff597250bf606309f07b 423 PANTHER PTHR11986:SF17 5 422 4.8E-184 T 21-04-2016 VFU_RS05140 9e30593de123ff597250bf606309f07b 423 PANTHER PTHR11986 5 422 4.8E-184 T 21-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VFU_RS05140 9e30593de123ff597250bf606309f07b 423 Gene3D G3DSA:3.90.1150.10 303 420 1.6E-37 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VFU_RS05140 9e30593de123ff597250bf606309f07b 423 SUPERFAMILY SSF53383 17 419 9.82E-131 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VFU_RS05140 9e30593de123ff597250bf606309f07b 423 Gene3D G3DSA:3.40.640.10 58 302 3.4E-86 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VFU_RS05140 9e30593de123ff597250bf606309f07b 423 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 9 420 4.3E-180 T 21-04-2016 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 VFU_RS01500 212e8605e129620c2f7fc3021b002e7c 328 PANTHER PTHR39573 2 328 1.5E-180 T 21-04-2016 VFU_RS01500 212e8605e129620c2f7fc3021b002e7c 328 Gene3D G3DSA:3.90.1200.10 108 326 2.8E-46 T 21-04-2016 VFU_RS01500 212e8605e129620c2f7fc3021b002e7c 328 Gene3D G3DSA:3.30.200.20 37 107 0.001 T 21-04-2016 VFU_RS01500 212e8605e129620c2f7fc3021b002e7c 328 PANTHER PTHR39573:SF1 2 328 1.5E-180 T 21-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 VFU_RS01500 212e8605e129620c2f7fc3021b002e7c 328 SUPERFAMILY SSF56112 6 328 9.91E-89 T 21-04-2016 IPR011009 Protein kinase-like domain VFU_RS01500 212e8605e129620c2f7fc3021b002e7c 328 Pfam PF01636 Phosphotransferase enzyme family 36 253 3.8E-42 T 21-04-2016 IPR002575 Aminoglycoside phosphotransferase VFU_RS01500 212e8605e129620c2f7fc3021b002e7c 328 Hamap MF_01497 Stress response kinase A [srkA]. 4 318 46.817 T 21-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 VFU_RS05575 369411ac6aa6c2e8b67057c57ab7765e 379 PANTHER PTHR30244:SF1 3 379 9.5E-160 T 21-04-2016 VFU_RS05575 369411ac6aa6c2e8b67057c57ab7765e 379 PRINTS PR00207 Flagellin signature 111 134 4.7E-26 T 21-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VFU_RS05575 369411ac6aa6c2e8b67057c57ab7765e 379 PRINTS PR00207 Flagellin signature 76 95 4.7E-26 T 21-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VFU_RS05575 369411ac6aa6c2e8b67057c57ab7765e 379 PRINTS PR00207 Flagellin signature 37 54 4.7E-26 T 21-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VFU_RS05575 369411ac6aa6c2e8b67057c57ab7765e 379 Gene3D G3DSA:1.20.1330.10 281 334 1.5E-59 T 21-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VFU_RS05575 369411ac6aa6c2e8b67057c57ab7765e 379 Gene3D G3DSA:1.20.1330.10 54 171 1.5E-59 T 21-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VFU_RS05575 369411ac6aa6c2e8b67057c57ab7765e 379 PANTHER PTHR30244 3 379 9.5E-160 T 21-04-2016 VFU_RS05575 369411ac6aa6c2e8b67057c57ab7765e 379 Pfam PF00700 Bacterial flagellin C-terminal helical region 294 378 8.5E-26 T 21-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VFU_RS05575 369411ac6aa6c2e8b67057c57ab7765e 379 Pfam PF07196 Flagellin hook IN motif 197 246 3.1E-9 T 21-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VFU_RS05575 369411ac6aa6c2e8b67057c57ab7765e 379 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 5.8E-44 T 21-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VFU_RS05575 369411ac6aa6c2e8b67057c57ab7765e 379 SUPERFAMILY SSF64518 1 379 1.57E-99 T 21-04-2016 VFU_RS15615 d2f79ee1e62685de7317edcc6371a59e 272 SUPERFAMILY SSF50447 83 179 2.16E-30 T 21-04-2016 IPR009000 Translation protein, beta-barrel domain VFU_RS15615 d2f79ee1e62685de7317edcc6371a59e 272 SUPERFAMILY SSF52540 2 97 4.85E-17 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS15615 d2f79ee1e62685de7317edcc6371a59e 272 Pfam PF03144 Elongation factor Tu domain 2 103 171 5.5E-17 T 21-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 VFU_RS15615 d2f79ee1e62685de7317edcc6371a59e 272 Gene3D G3DSA:2.40.30.10 90 176 6.2E-36 T 21-04-2016 VFU_RS15615 d2f79ee1e62685de7317edcc6371a59e 272 PANTHER PTHR23115:SF151 1 271 6.2E-186 T 21-04-2016 VFU_RS15615 d2f79ee1e62685de7317edcc6371a59e 272 Pfam PF03143 Elongation factor Tu C-terminal domain 176 270 8.5E-34 T 21-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal VFU_RS15615 d2f79ee1e62685de7317edcc6371a59e 272 Pfam PF00009 Elongation factor Tu GTP binding domain 2 79 2.4E-8 T 21-04-2016 VFU_RS15615 d2f79ee1e62685de7317edcc6371a59e 272 PANTHER PTHR23115 1 271 6.2E-186 T 21-04-2016 VFU_RS15615 d2f79ee1e62685de7317edcc6371a59e 272 Gene3D G3DSA:2.40.30.10 178 271 2.5E-47 T 21-04-2016 VFU_RS15615 d2f79ee1e62685de7317edcc6371a59e 272 SUPERFAMILY SSF50465 176 271 9.78E-36 T 21-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VFU_RS15615 d2f79ee1e62685de7317edcc6371a59e 272 Gene3D G3DSA:3.40.50.300 3 89 6.3E-17 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS06230 99b334c1d86aeead6c8f4118be35fa55 295 PIRSF PIRSF003092 7 287 3.5E-85 T 21-04-2016 IPR025501 ATP binding protein MinD VFU_RS06230 99b334c1d86aeead6c8f4118be35fa55 295 Gene3D G3DSA:3.40.50.300 21 261 4.3E-57 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS06230 99b334c1d86aeead6c8f4118be35fa55 295 PANTHER PTHR13696:SF3 1 274 2.2E-136 T 21-04-2016 VFU_RS06230 99b334c1d86aeead6c8f4118be35fa55 295 PANTHER PTHR13696 1 274 2.2E-136 T 21-04-2016 VFU_RS06230 99b334c1d86aeead6c8f4118be35fa55 295 SUPERFAMILY SSF52540 22 282 2.66E-53 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS06230 99b334c1d86aeead6c8f4118be35fa55 295 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 25 211 3.1E-25 T 21-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain VFU_RS09860 5ab3bef2f472dfaefa10b9f611c0881b 135 Gene3D G3DSA:1.10.760.10 11 102 7.6E-14 T 21-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VFU_RS09860 5ab3bef2f472dfaefa10b9f611c0881b 135 SUPERFAMILY SSF46626 10 101 3.39E-15 T 21-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VFU_RS09860 5ab3bef2f472dfaefa10b9f611c0881b 135 Pfam PF00034 Cytochrome c 11 100 2.1E-7 T 21-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VFU_RS07405 71cbb8035a927a607d31ace7fadb55ea 715 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 59 715 2.6E-120 T 21-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 VFU_RS07405 71cbb8035a927a607d31ace7fadb55ea 715 Gene3D G3DSA:2.40.170.20 175 715 2.7E-151 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 VFU_RS07405 71cbb8035a927a607d31ace7fadb55ea 715 PANTHER PTHR32552 12 715 2.5E-143 T 21-04-2016 VFU_RS07405 71cbb8035a927a607d31ace7fadb55ea 715 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 160 1.3E-15 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 VFU_RS07405 71cbb8035a927a607d31ace7fadb55ea 715 SUPERFAMILY SSF56935 27 715 8.7E-137 T 21-04-2016 VFU_RS07405 71cbb8035a927a607d31ace7fadb55ea 715 Gene3D G3DSA:2.170.130.10 28 171 1.8E-31 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 VFU_RS07405 71cbb8035a927a607d31ace7fadb55ea 715 PANTHER PTHR32552:SF17 12 715 2.5E-143 T 21-04-2016 VFU_RS07405 71cbb8035a927a607d31ace7fadb55ea 715 Pfam PF00593 TonB dependent receptor 471 714 7.9E-32 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 VFU_RS03575 9e95f5b9ef5b7d0b6ff48d60d334607b 238 SUPERFAMILY SSF52540 1 235 2.27E-61 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS03575 9e95f5b9ef5b7d0b6ff48d60d334607b 238 SMART SM00382 24 214 2.0E-14 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS03575 9e95f5b9ef5b7d0b6ff48d60d334607b 238 PANTHER PTHR24220 1 234 2.6E-96 T 21-04-2016 VFU_RS03575 9e95f5b9ef5b7d0b6ff48d60d334607b 238 Gene3D G3DSA:3.40.50.300 1 227 7.4E-61 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS03575 9e95f5b9ef5b7d0b6ff48d60d334607b 238 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS03575 9e95f5b9ef5b7d0b6ff48d60d334607b 238 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 215 8.7E-103 T 21-04-2016 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0006810|GO:0016021|GO:0042626 VFU_RS03575 9e95f5b9ef5b7d0b6ff48d60d334607b 238 PANTHER PTHR24220:SF439 1 234 2.6E-96 T 21-04-2016 VFU_RS03575 9e95f5b9ef5b7d0b6ff48d60d334607b 238 Pfam PF00005 ABC transporter 19 161 3.5E-30 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS11145 fc4add4746b511d50bf0d1650d130035 191 Gene3D G3DSA:3.40.50.360 1 181 4.6E-44 T 21-04-2016 IPR029039 Flavoprotein-like domain VFU_RS11145 fc4add4746b511d50bf0d1650d130035 191 PANTHER PTHR30543 1 182 9.0E-50 T 21-04-2016 VFU_RS11145 fc4add4746b511d50bf0d1650d130035 191 PANTHER PTHR30543:SF6 1 182 9.0E-50 T 21-04-2016 VFU_RS11145 fc4add4746b511d50bf0d1650d130035 191 SUPERFAMILY SSF52218 5 175 8.54E-45 T 21-04-2016 IPR029039 Flavoprotein-like domain VFU_RS11145 fc4add4746b511d50bf0d1650d130035 191 Pfam PF03358 NADPH-dependent FMN reductase 5 148 3.8E-33 T 21-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 VFU_RS09260 2a2b77f43ebee8af18218e3122bc457d 265 PANTHER PTHR40572 30 265 5.1E-66 T 21-04-2016 VFU_RS09260 2a2b77f43ebee8af18218e3122bc457d 265 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 127 260 6.6E-17 T 21-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 VFU_RS00360 5c104daaa1653a4372aabd15c77cfabf 108 Pfam PF00085 Thioredoxin 5 106 1.8E-32 T 21-04-2016 IPR013766 Thioredoxin domain GO:0045454 VFU_RS00360 5c104daaa1653a4372aabd15c77cfabf 108 PANTHER PTHR10438 3 108 7.2E-35 T 21-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VFU_RS00360 5c104daaa1653a4372aabd15c77cfabf 108 Gene3D G3DSA:3.40.30.10 2 107 2.4E-39 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS00360 5c104daaa1653a4372aabd15c77cfabf 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 3.6E-37 T 21-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VFU_RS00360 5c104daaa1653a4372aabd15c77cfabf 108 SUPERFAMILY SSF52833 3 107 2.21E-37 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS00360 5c104daaa1653a4372aabd15c77cfabf 108 PRINTS PR00421 Thioredoxin family signature 32 41 3.3E-10 T 21-04-2016 VFU_RS00360 5c104daaa1653a4372aabd15c77cfabf 108 PRINTS PR00421 Thioredoxin family signature 72 83 3.3E-10 T 21-04-2016 VFU_RS00360 5c104daaa1653a4372aabd15c77cfabf 108 PRINTS PR00421 Thioredoxin family signature 24 32 3.3E-10 T 21-04-2016 VFU_RS00360 5c104daaa1653a4372aabd15c77cfabf 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 21-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 VFU_RS00360 5c104daaa1653a4372aabd15c77cfabf 108 PIRSF PIRSF000077 2 108 2.4E-42 T 21-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VFU_RS00415 5cfd90835a88a371251198699c56ddd0 295 Gene3D G3DSA:3.40.50.150 99 287 1.2E-43 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS00415 5cfd90835a88a371251198699c56ddd0 295 SUPERFAMILY SSF53335 44 292 4.37E-46 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS00415 5cfd90835a88a371251198699c56ddd0 295 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 293 6.8E-104 T 21-04-2016 VFU_RS00415 5cfd90835a88a371251198699c56ddd0 295 PANTHER PTHR18895 12 291 3.1E-160 T 21-04-2016 VFU_RS00415 5cfd90835a88a371251198699c56ddd0 295 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 287 7.1E-110 T 21-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 VFU_RS00415 5cfd90835a88a371251198699c56ddd0 295 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 293 33.69 T 21-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 VFU_RS00415 5cfd90835a88a371251198699c56ddd0 295 PIRSF PIRSF000401 1 295 1.3E-99 T 21-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 VFU_RS00415 5cfd90835a88a371251198699c56ddd0 295 PANTHER PTHR18895:SF69 12 291 3.1E-160 T 21-04-2016 VFU_RS06145 6cc1dbfd06036e88f03576c199d0de5e 402 PANTHER PTHR23151 3 402 1.7E-241 T 21-04-2016 VFU_RS06145 6cc1dbfd06036e88f03576c199d0de5e 402 Pfam PF02817 e3 binding domain 113 146 3.3E-12 T 21-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 VFU_RS06145 6cc1dbfd06036e88f03576c199d0de5e 402 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 172 400 1.9E-80 T 21-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 VFU_RS06145 6cc1dbfd06036e88f03576c199d0de5e 402 SUPERFAMILY SSF52777 172 401 4.89E-89 T 21-04-2016 VFU_RS06145 6cc1dbfd06036e88f03576c199d0de5e 402 SUPERFAMILY SSF47005 107 149 1.31E-11 T 21-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 VFU_RS06145 6cc1dbfd06036e88f03576c199d0de5e 402 Gene3D G3DSA:2.40.50.100 1 96 1.9E-26 T 21-04-2016 VFU_RS06145 6cc1dbfd06036e88f03576c199d0de5e 402 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 402 1.0E-185 T 21-04-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|UniPathway: UPA00868 VFU_RS06145 6cc1dbfd06036e88f03576c199d0de5e 402 SUPERFAMILY SSF51230 1 94 1.07E-24 T 21-04-2016 IPR011053 Single hybrid motif VFU_RS06145 6cc1dbfd06036e88f03576c199d0de5e 402 Pfam PF00364 Biotin-requiring enzyme 4 76 9.9E-19 T 21-04-2016 IPR000089 Biotin/lipoyl attachment VFU_RS06145 6cc1dbfd06036e88f03576c199d0de5e 402 Gene3D G3DSA:4.10.320.10 113 152 3.3E-20 T 21-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 VFU_RS06145 6cc1dbfd06036e88f03576c199d0de5e 402 PANTHER PTHR23151:SF47 3 402 1.7E-241 T 21-04-2016 VFU_RS06145 6cc1dbfd06036e88f03576c199d0de5e 402 Gene3D G3DSA:3.30.559.10 164 400 1.5E-90 T 21-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain VFU_RS06145 6cc1dbfd06036e88f03576c199d0de5e 402 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 21-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site VFU_RS03695 a85d178a0b5b3abadfa24e9f56bd6751 155 SUPERFAMILY SSF54893 2 100 4.32E-36 T 21-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VFU_RS03695 a85d178a0b5b3abadfa24e9f56bd6751 155 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 150 5.6E-62 T 21-04-2016 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 VFU_RS03695 a85d178a0b5b3abadfa24e9f56bd6751 155 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 150 8.7E-19 T 21-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal VFU_RS03695 a85d178a0b5b3abadfa24e9f56bd6751 155 Gene3D G3DSA:3.30.70.140 2 98 3.6E-37 T 21-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VFU_RS03695 a85d178a0b5b3abadfa24e9f56bd6751 155 SUPERFAMILY SSF57825 101 151 9.81E-16 T 21-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal VFU_RS03695 a85d178a0b5b3abadfa24e9f56bd6751 155 PANTHER PTHR35805 2 154 1.7E-76 T 21-04-2016 VFU_RS03695 a85d178a0b5b3abadfa24e9f56bd6751 155 PANTHER PTHR35805:SF1 2 154 1.7E-76 T 21-04-2016 VFU_RS03695 a85d178a0b5b3abadfa24e9f56bd6751 155 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 1.0E-43 T 21-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VFU_RS03695 a85d178a0b5b3abadfa24e9f56bd6751 155 Gene3D G3DSA:2.30.30.20 101 152 5.5E-23 T 21-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal VFU_RS03695 a85d178a0b5b3abadfa24e9f56bd6751 155 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 97 5.3E-31 T 21-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VFU_RS03695 a85d178a0b5b3abadfa24e9f56bd6751 155 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 33.679 T 21-04-2016 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 VFU_RS11965 aefc893ccaec7b865a381d350206ddb9 323 PANTHER PTHR30163:SF2 4 322 4.8E-138 T 21-04-2016 VFU_RS11965 aefc893ccaec7b865a381d350206ddb9 323 PANTHER PTHR30163 4 322 4.8E-138 T 21-04-2016 IPR011757 Lytic transglycosylase MltB VFU_RS11965 aefc893ccaec7b865a381d350206ddb9 323 Pfam PF13406 Transglycosylase SLT domain 23 319 5.2E-110 T 21-04-2016 IPR031304 Transglycosylase SLT domain 2 VFU_RS11965 aefc893ccaec7b865a381d350206ddb9 323 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 23 322 2.9E-112 T 21-04-2016 IPR011970 Lytic murein transglycosylase VFU_RS11965 aefc893ccaec7b865a381d350206ddb9 323 SUPERFAMILY SSF53955 8 322 6.94E-102 T 21-04-2016 IPR023346 Lysozyme-like domain VFU_RS11965 aefc893ccaec7b865a381d350206ddb9 323 Gene3D G3DSA:1.10.530.10 205 322 4.8E-61 T 21-04-2016 VFU_RS11965 aefc893ccaec7b865a381d350206ddb9 323 Gene3D G3DSA:1.10.530.10 68 124 4.8E-61 T 21-04-2016 VFU_RS00565 bc17b0b926005065d950c257950dc377 171 PANTHER PTHR23416 83 156 1.0E-23 T 21-04-2016 VFU_RS00565 bc17b0b926005065d950c257950dc377 171 SUPERFAMILY SSF51161 20 138 8.73E-30 T 21-04-2016 IPR011004 Trimeric LpxA-like VFU_RS00565 bc17b0b926005065d950c257950dc377 171 Gene3D G3DSA:2.160.10.10 20 144 3.8E-33 T 21-04-2016 VFU_RS00565 bc17b0b926005065d950c257950dc377 171 PANTHER PTHR23416:SF58 83 156 1.0E-23 T 21-04-2016 VFU_RS00565 bc17b0b926005065d950c257950dc377 171 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 85 118 9.3E-12 T 21-04-2016 IPR001451 Hexapeptide repeat VFU_RS13795 fd682703deb6b86cd437aac595711b04 335 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 8 326 3.4E-116 T 21-04-2016 IPR006330 Adenosine/adenine deaminase GO:0019239 VFU_RS13795 fd682703deb6b86cd437aac595711b04 335 Gene3D G3DSA:3.20.20.140 3 329 1.4E-103 T 21-04-2016 VFU_RS13795 fd682703deb6b86cd437aac595711b04 335 PANTHER PTHR11409:SF41 1 335 1.7E-160 T 21-04-2016 VFU_RS13795 fd682703deb6b86cd437aac595711b04 335 PANTHER PTHR11409 1 335 1.7E-160 T 21-04-2016 VFU_RS13795 fd682703deb6b86cd437aac595711b04 335 Hamap MF_01962 Adenine deaminase. 4 316 84.596 T 21-04-2016 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 VFU_RS13795 fd682703deb6b86cd437aac595711b04 335 SUPERFAMILY SSF51556 3 321 1.95E-89 T 21-04-2016 IPR032466 Metal-dependent hydrolase VFU_RS13795 fd682703deb6b86cd437aac595711b04 335 Pfam PF00962 Adenosine/AMP deaminase 8 323 1.3E-74 T 21-04-2016 IPR001365 Adenosine/AMP deaminase domain GO:0019239 VFU_RS09755 44bca2bbc3ffe21db40fead75b4fd60b 216 ProSitePatterns PS00195 Glutaredoxin active site. 3 18 - T 21-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 VFU_RS09755 44bca2bbc3ffe21db40fead75b4fd60b 216 Gene3D G3DSA:3.40.30.10 8 79 1.0E-23 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS09755 44bca2bbc3ffe21db40fead75b4fd60b 216 SUPERFAMILY SSF47616 81 216 8.88E-39 T 21-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like VFU_RS09755 44bca2bbc3ffe21db40fead75b4fd60b 216 PANTHER PTHR11260 1 202 1.8E-28 T 21-04-2016 VFU_RS09755 44bca2bbc3ffe21db40fead75b4fd60b 216 SUPERFAMILY SSF52833 1 77 8.33E-18 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS09755 44bca2bbc3ffe21db40fead75b4fd60b 216 Pfam PF04399 Glutaredoxin 2, C terminal domain 87 215 6.3E-44 T 21-04-2016 IPR007494 Glutaredoxin 2, C-terminal VFU_RS09755 44bca2bbc3ffe21db40fead75b4fd60b 216 TIGRFAM TIGR02182 GRXB: glutaredoxin, GrxB family 2 211 2.2E-61 T 21-04-2016 IPR011901 Glutaredoxin, GrxB GO:0009055|GO:0015035 VFU_RS09755 44bca2bbc3ffe21db40fead75b4fd60b 216 Gene3D G3DSA:1.20.1050.10 92 216 2.1E-40 T 21-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like VFU_RS09755 44bca2bbc3ffe21db40fead75b4fd60b 216 PANTHER PTHR11260:SF237 1 202 1.8E-28 T 21-04-2016 VFU_RS09755 44bca2bbc3ffe21db40fead75b4fd60b 216 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 71 1.5E-12 T 21-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VFU_RS14835 40f65bba995bf0f5e0507e8312106715 141 SMART SM00732 3 104 4.5E-36 T 21-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 VFU_RS14835 40f65bba995bf0f5e0507e8312106715 141 Pfam PF03652 Holliday junction resolvase 4 136 5.8E-36 T 21-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 VFU_RS14835 40f65bba995bf0f5e0507e8312106715 141 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 3 139 24.488 T 21-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 VFU_RS14835 40f65bba995bf0f5e0507e8312106715 141 PANTHER PTHR33317 4 139 1.8E-38 T 21-04-2016 VFU_RS14835 40f65bba995bf0f5e0507e8312106715 141 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 6 136 4.0E-49 T 21-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 VFU_RS14835 40f65bba995bf0f5e0507e8312106715 141 Gene3D G3DSA:3.30.420.140 3 137 4.9E-41 T 21-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 VFU_RS14835 40f65bba995bf0f5e0507e8312106715 141 SUPERFAMILY SSF53098 3 137 1.67E-37 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VFU_RS00225 840e19b0b9135ae9379b30d93903c704 123 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 123 8.5E-49 T 21-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS00225 840e19b0b9135ae9379b30d93903c704 123 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 58 123 2.0E-17 T 21-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 VFU_RS00225 840e19b0b9135ae9379b30d93903c704 123 Gene3D G3DSA:3.30.1390.10 53 123 6.4E-34 T 21-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VFU_RS00225 840e19b0b9135ae9379b30d93903c704 123 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 123 25.304 T 21-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS00225 840e19b0b9135ae9379b30d93903c704 123 SUPERFAMILY SSF48300 4 59 4.45E-18 T 21-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS00225 840e19b0b9135ae9379b30d93903c704 123 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 50 1.8E-17 T 21-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS00225 840e19b0b9135ae9379b30d93903c704 123 Gene3D G3DSA:1.20.5.710 2 52 4.3E-23 T 21-04-2016 VFU_RS00225 840e19b0b9135ae9379b30d93903c704 123 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 57 123 8.8E-31 T 21-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 VFU_RS00225 840e19b0b9135ae9379b30d93903c704 123 SUPERFAMILY SSF54736 52 123 1.2E-24 T 21-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VFU_RS15185 3fdf3f4c15bb9994d583f778486bddcb 280 Gene3D G3DSA:3.40.50.300 38 180 3.3E-14 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS15185 3fdf3f4c15bb9994d583f778486bddcb 280 SUPERFAMILY SSF52540 11 248 8.63E-25 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS15185 3fdf3f4c15bb9994d583f778486bddcb 280 PANTHER PTHR35894:SF1 2 279 6.8E-90 T 21-04-2016 VFU_RS15185 3fdf3f4c15bb9994d583f778486bddcb 280 Pfam PF13401 AAA domain 42 167 5.3E-19 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS15185 3fdf3f4c15bb9994d583f778486bddcb 280 PANTHER PTHR35894 2 279 6.8E-90 T 21-04-2016 VFU_RS15665 3b3c2a359c1e3269a814e4c144a735e4 129 PANTHER PTHR12586:SF3 8 129 2.5E-70 T 21-04-2016 VFU_RS15665 3b3c2a359c1e3269a814e4c144a735e4 129 Gene3D G3DSA:3.30.870.10 4 127 5.3E-13 T 21-04-2016 VFU_RS15665 3b3c2a359c1e3269a814e4c144a735e4 129 PANTHER PTHR12586 8 129 2.5E-70 T 21-04-2016 IPR016270 Phospholipase D, phosphatidylserine synthase type GO:0008654|GO:0016780 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 VFU_RS15665 3b3c2a359c1e3269a814e4c144a735e4 129 Pfam PF13091 PLD-like domain 4 127 2.8E-18 T 21-04-2016 IPR025202 Phospholipase D-like domain VFU_RS15665 3b3c2a359c1e3269a814e4c144a735e4 129 SMART SM00155 76 103 9.5E-4 T 21-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 VFU_RS15665 3b3c2a359c1e3269a814e4c144a735e4 129 SUPERFAMILY SSF56024 4 125 1.26E-16 T 21-04-2016 VFU_RS14910 4c3decc9f6dc5ca7e653a6e5c9f79722 360 Gene3D G3DSA:3.40.50.1980 24 175 1.9E-32 T 21-04-2016 VFU_RS14910 4c3decc9f6dc5ca7e653a6e5c9f79722 360 Gene3D G3DSA:3.40.50.1980 178 334 1.0E-38 T 21-04-2016 VFU_RS14910 4c3decc9f6dc5ca7e653a6e5c9f79722 360 Pfam PF01497 Periplasmic binding protein 44 297 1.4E-34 T 21-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 VFU_RS14910 4c3decc9f6dc5ca7e653a6e5c9f79722 360 PANTHER PTHR30535 156 355 8.5E-105 T 21-04-2016 VFU_RS14910 4c3decc9f6dc5ca7e653a6e5c9f79722 360 PANTHER PTHR30535 1 139 8.5E-105 T 21-04-2016 VFU_RS14910 4c3decc9f6dc5ca7e653a6e5c9f79722 360 PANTHER PTHR30535:SF16 156 355 8.5E-105 T 21-04-2016 VFU_RS14910 4c3decc9f6dc5ca7e653a6e5c9f79722 360 PANTHER PTHR30535:SF16 1 139 8.5E-105 T 21-04-2016 VFU_RS14910 4c3decc9f6dc5ca7e653a6e5c9f79722 360 SUPERFAMILY SSF53807 25 325 4.32E-59 T 21-04-2016 VFU_RS10620 18187b699e1731858e6d1d3b46c8cd62 266 PANTHER PTHR11922 29 253 2.1E-58 T 21-04-2016 VFU_RS10620 18187b699e1731858e6d1d3b46c8cd62 266 Gene3D G3DSA:3.40.50.880 8 249 2.3E-50 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like VFU_RS10620 18187b699e1731858e6d1d3b46c8cd62 266 PANTHER PTHR11922:SF18 29 253 2.1E-58 T 21-04-2016 VFU_RS10620 18187b699e1731858e6d1d3b46c8cd62 266 Pfam PF07722 Peptidase C26 10 225 5.4E-68 T 21-04-2016 IPR011697 Peptidase C26 GO:0006541|GO:0016787 VFU_RS10620 18187b699e1731858e6d1d3b46c8cd62 266 SUPERFAMILY SSF52317 7 248 3.39E-40 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like VFU_RS12705 e8474b8f8c00e2be3780a2f4905ba6a0 135 Pfam PF00571 CBS domain 78 125 3.2E-9 T 21-04-2016 IPR000644 CBS domain VFU_RS12705 e8474b8f8c00e2be3780a2f4905ba6a0 135 PANTHER PTHR11911:SF68 34 126 2.1E-14 T 21-04-2016 VFU_RS12705 e8474b8f8c00e2be3780a2f4905ba6a0 135 SMART SM00116 83 130 8.6E-5 T 21-04-2016 IPR000644 CBS domain VFU_RS12705 e8474b8f8c00e2be3780a2f4905ba6a0 135 SMART SM00116 16 65 11.0 T 21-04-2016 IPR000644 CBS domain VFU_RS12705 e8474b8f8c00e2be3780a2f4905ba6a0 135 SUPERFAMILY SSF54631 5 126 1.04E-23 T 21-04-2016 VFU_RS12705 e8474b8f8c00e2be3780a2f4905ba6a0 135 Gene3D G3DSA:3.10.580.10 8 126 1.2E-23 T 21-04-2016 VFU_RS12705 e8474b8f8c00e2be3780a2f4905ba6a0 135 PANTHER PTHR11911 34 126 2.1E-14 T 21-04-2016 VFU_RS09840 8c4be9f5a0d9cce1abce50c17489dd89 380 SUPERFAMILY SSF50969 39 344 8.63E-44 T 21-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like VFU_RS09840 8c4be9f5a0d9cce1abce50c17489dd89 380 Gene3D G3DSA:2.130.10.10 21 376 5.5E-61 T 21-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 VFU_RS09840 8c4be9f5a0d9cce1abce50c17489dd89 380 Pfam PF06433 Methylamine dehydrogenase heavy chain (MADH) 43 377 1.1E-25 T 21-04-2016 IPR009451 Amine dehydrogenase heavy chain GO:0030058|GO:0042597|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967 VFU_RS00660 8dcbb2c300c03bae943cb65f6cbb31d6 340 Gene3D G3DSA:3.30.1490.20 199 210 2.2E-4 T 21-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VFU_RS00660 8dcbb2c300c03bae943cb65f6cbb31d6 340 Gene3D G3DSA:3.30.1490.20 104 165 2.2E-4 T 21-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VFU_RS00660 8dcbb2c300c03bae943cb65f6cbb31d6 340 SUPERFAMILY SSF56059 200 292 2.42E-15 T 21-04-2016 VFU_RS00660 8dcbb2c300c03bae943cb65f6cbb31d6 340 SUPERFAMILY SSF56059 101 171 2.42E-15 T 21-04-2016 VFU_RS08280 5e5a5462c95c6ade36913483c5d1cde0 286 Pfam PF00892 EamA-like transporter family 149 278 3.6E-18 T 21-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VFU_RS08280 5e5a5462c95c6ade36913483c5d1cde0 286 Pfam PF00892 EamA-like transporter family 7 137 7.0E-13 T 21-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VFU_RS08280 5e5a5462c95c6ade36913483c5d1cde0 286 SUPERFAMILY SSF103481 189 283 1.7E-14 T 21-04-2016 VFU_RS08280 5e5a5462c95c6ade36913483c5d1cde0 286 PANTHER PTHR22911 1 286 1.0E-36 T 21-04-2016 VFU_RS08280 5e5a5462c95c6ade36913483c5d1cde0 286 SUPERFAMILY SSF103481 40 141 6.02E-11 T 21-04-2016 VFU_RS09585 50e42e8c4a072ffa814b5f94b23dcef5 189 SUPERFAMILY SSF50475 27 129 1.36E-16 T 21-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 VFU_RS09585 50e42e8c4a072ffa814b5f94b23dcef5 189 PANTHER PTHR30212:SF4 1 178 4.1E-34 T 21-04-2016 VFU_RS09585 50e42e8c4a072ffa814b5f94b23dcef5 189 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 29 122 6.8E-16 T 21-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 VFU_RS09585 50e42e8c4a072ffa814b5f94b23dcef5 189 Gene3D G3DSA:2.30.110.10 24 145 7.7E-26 T 21-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 VFU_RS09585 50e42e8c4a072ffa814b5f94b23dcef5 189 PANTHER PTHR30212 1 178 4.1E-34 T 21-04-2016 VFU_RS09585 50e42e8c4a072ffa814b5f94b23dcef5 189 TIGRFAM TIGR04025 PPOX_FMN_DR2398: pyridoxamine 5'-phosphate oxidase, FMN-binding family 8 186 1.7E-64 T 21-04-2016 IPR024029 Pyridoxamine 5-phosphate oxidase, FMN-dependent VFU_RS11150 4980915fdaa8d5f627b97d708262e5ab 531 Gene3D G3DSA:3.40.50.300 318 528 5.3E-44 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS11150 4980915fdaa8d5f627b97d708262e5ab 531 SUPERFAMILY SSF52540 297 528 2.96E-45 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS11150 4980915fdaa8d5f627b97d708262e5ab 531 Pfam PF12848 ABC transporter 224 309 4.8E-22 T 21-04-2016 IPR032781 ABC-transporter extension domain VFU_RS11150 4980915fdaa8d5f627b97d708262e5ab 531 SUPERFAMILY SSF52540 4 239 2.79E-43 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS11150 4980915fdaa8d5f627b97d708262e5ab 531 SMART SM00382 26 238 4.9E-11 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS11150 4980915fdaa8d5f627b97d708262e5ab 531 SMART SM00382 344 512 9.5E-10 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS11150 4980915fdaa8d5f627b97d708262e5ab 531 PANTHER PTHR19211:SF38 2 527 0.0 T 21-04-2016 VFU_RS11150 4980915fdaa8d5f627b97d708262e5ab 531 PANTHER PTHR19211 2 527 0.0 T 21-04-2016 VFU_RS11150 4980915fdaa8d5f627b97d708262e5ab 531 Pfam PF00005 ABC transporter 336 467 2.3E-21 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS11150 4980915fdaa8d5f627b97d708262e5ab 531 Pfam PF00005 ABC transporter 18 184 1.6E-20 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS11150 4980915fdaa8d5f627b97d708262e5ab 531 Gene3D G3DSA:3.40.50.300 4 100 5.7E-47 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS11150 4980915fdaa8d5f627b97d708262e5ab 531 Gene3D G3DSA:3.40.50.300 132 267 5.7E-47 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS11150 4980915fdaa8d5f627b97d708262e5ab 531 Gene3D G3DSA:3.40.50.300 268 292 2.4E-5 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS06380 c8b3e399f3f47c37476c6efaff2dac79 352 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 43 272 4.0E-17 T 21-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VFU_RS06380 c8b3e399f3f47c37476c6efaff2dac79 352 Gene3D G3DSA:2.40.50.100 198 230 1.0E-14 T 21-04-2016 VFU_RS06380 c8b3e399f3f47c37476c6efaff2dac79 352 Gene3D G3DSA:2.40.50.100 46 78 1.0E-14 T 21-04-2016 VFU_RS06380 c8b3e399f3f47c37476c6efaff2dac79 352 PANTHER PTHR30367 11 327 8.6E-56 T 21-04-2016 VFU_RS06380 c8b3e399f3f47c37476c6efaff2dac79 352 SUPERFAMILY SSF111369 45 93 7.45E-11 T 21-04-2016 VFU_RS06380 c8b3e399f3f47c37476c6efaff2dac79 352 SUPERFAMILY SSF111369 122 168 7.45E-11 T 21-04-2016 VFU_RS06380 c8b3e399f3f47c37476c6efaff2dac79 352 SUPERFAMILY SSF111369 182 294 1.83E-5 T 21-04-2016 VFU_RS00075 8c6b15233fda411ba8a8d73c13766b7c 87 SUPERFAMILY SSF50182 7 69 1.19E-24 T 21-04-2016 IPR010920 LSM domain VFU_RS00075 8c6b15233fda411ba8a8d73c13766b7c 87 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.727 T 21-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 VFU_RS00075 8c6b15233fda411ba8a8d73c13766b7c 87 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 6.8E-30 T 21-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 VFU_RS00075 8c6b15233fda411ba8a8d73c13766b7c 87 Gene3D G3DSA:2.30.30.100 1 71 3.3E-38 T 21-04-2016 VFU_RS00075 8c6b15233fda411ba8a8d73c13766b7c 87 PANTHER PTHR34772:SF1 1 87 7.3E-42 T 21-04-2016 VFU_RS00075 8c6b15233fda411ba8a8d73c13766b7c 87 PANTHER PTHR34772 1 87 7.3E-42 T 21-04-2016 VFU_RS07665 27c97e3adafdf856a3b9101e45e8c0ce 871 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 8 50 2.1E-12 T 21-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 VFU_RS07665 27c97e3adafdf856a3b9101e45e8c0ce 871 Pfam PF04324 BFD-like [2Fe-2S] binding domain 812 861 4.0E-13 T 21-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain VFU_RS07665 27c97e3adafdf856a3b9101e45e8c0ce 871 Gene3D G3DSA:2.40.40.20 573 691 1.1E-27 T 21-04-2016 VFU_RS07665 27c97e3adafdf856a3b9101e45e8c0ce 871 PANTHER PTHR11615:SF119 8 708 4.2E-172 T 21-04-2016 VFU_RS07665 27c97e3adafdf856a3b9101e45e8c0ce 871 SUPERFAMILY SSF50692 548 690 1.08E-23 T 21-04-2016 IPR009010 Aspartate decarboxylase-like domain VFU_RS07665 27c97e3adafdf856a3b9101e45e8c0ce 871 PANTHER PTHR11615 8 708 4.2E-172 T 21-04-2016 VFU_RS07665 27c97e3adafdf856a3b9101e45e8c0ce 871 Pfam PF00384 Molybdopterin oxidoreductase 64 476 1.1E-71 T 21-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 VFU_RS07665 27c97e3adafdf856a3b9101e45e8c0ce 871 SMART SM00926 3 52 1.5E-10 T 21-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 VFU_RS07665 27c97e3adafdf856a3b9101e45e8c0ce 871 Gene3D G3DSA:2.20.25.90 6 51 2.0E-14 T 21-04-2016 VFU_RS07665 27c97e3adafdf856a3b9101e45e8c0ce 871 SUPERFAMILY SSF53706 7 562 1.83E-166 T 21-04-2016 VFU_RS07665 27c97e3adafdf856a3b9101e45e8c0ce 871 Gene3D G3DSA:3.40.228.10 127 314 1.2E-49 T 21-04-2016 VFU_RS07665 27c97e3adafdf856a3b9101e45e8c0ce 871 Pfam PF01568 Molydopterin dinucleotide binding domain 573 683 9.1E-19 T 21-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 VFU_RS07665 27c97e3adafdf856a3b9101e45e8c0ce 871 Gene3D G3DSA:3.40.50.740 315 560 2.5E-83 T 21-04-2016 VFU_RS07665 27c97e3adafdf856a3b9101e45e8c0ce 871 Gene3D G3DSA:3.40.50.740 56 126 2.5E-83 T 21-04-2016 VFU_RS13105 63ba4922d8ff4a57e435b30351811b5b 345 Pfam PF12069 Protein of unknown function (DUF3549) 3 340 2.0E-137 T 21-04-2016 IPR021936 Protein of unknown function DUF3549 VFU_RS11710 a044a60aed33fa6d08e1c5e51268e185 374 PIRSF PIRSF000183 1 371 5.5E-154 T 21-04-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 VFU_RS11710 a044a60aed33fa6d08e1c5e51268e185 374 SUPERFAMILY SSF52283 305 360 1.11E-67 T 21-04-2016 VFU_RS11710 a044a60aed33fa6d08e1c5e51268e185 374 SUPERFAMILY SSF52283 1 137 1.11E-67 T 21-04-2016 VFU_RS11710 a044a60aed33fa6d08e1c5e51268e185 374 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 352 1.7E-81 T 21-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VFU_RS11710 a044a60aed33fa6d08e1c5e51268e185 374 Gene3D G3DSA:3.50.50.60 179 203 1.8E-7 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS11710 a044a60aed33fa6d08e1c5e51268e185 374 Gene3D G3DSA:3.40.50.1770 3 178 2.3E-61 T 21-04-2016 VFU_RS11710 a044a60aed33fa6d08e1c5e51268e185 374 Gene3D G3DSA:3.40.50.1770 204 361 3.8E-29 T 21-04-2016 VFU_RS11710 a044a60aed33fa6d08e1c5e51268e185 374 SUPERFAMILY SSF51735 137 303 1.6E-48 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS11710 a044a60aed33fa6d08e1c5e51268e185 374 PANTHER PTHR10160 1 371 1.3E-213 T 21-04-2016 VFU_RS11710 a044a60aed33fa6d08e1c5e51268e185 374 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 8.4E-46 T 21-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VFU_RS11710 a044a60aed33fa6d08e1c5e51268e185 374 SMART SM01003 4 137 4.8E-79 T 21-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VFU_RS11710 a044a60aed33fa6d08e1c5e51268e185 374 SMART SM01002 149 297 6.5E-87 T 21-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VFU_RS11710 a044a60aed33fa6d08e1c5e51268e185 374 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 370 1.4E-152 T 21-04-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 VFU_RS08345 40576313df0b189f33a9c96231480830 169 PANTHER PTHR23091 1 151 8.6E-30 T 21-04-2016 VFU_RS08345 40576313df0b189f33a9c96231480830 169 Pfam PF13527 Acetyltransferase (GNAT) domain 3 131 7.4E-12 T 21-04-2016 VFU_RS08345 40576313df0b189f33a9c96231480830 169 Gene3D G3DSA:3.40.630.30 1 151 2.9E-20 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase VFU_RS08345 40576313df0b189f33a9c96231480830 169 PANTHER PTHR23091:SF237 1 151 8.6E-30 T 21-04-2016 VFU_RS08345 40576313df0b189f33a9c96231480830 169 SUPERFAMILY SSF55729 1 148 4.87E-28 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase VFU_RS09835 d5b6296f2738e6ef3720c74a02669c57 397 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 114 376 4.1E-30 T 21-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 VFU_RS09835 d5b6296f2738e6ef3720c74a02669c57 397 SMART SM00359 3 87 3.8E-15 T 21-04-2016 IPR002478 PUA domain GO:0003723 VFU_RS09835 d5b6296f2738e6ef3720c74a02669c57 397 SUPERFAMILY SSF53335 78 393 1.82E-70 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS09835 d5b6296f2738e6ef3720c74a02669c57 397 Gene3D G3DSA:3.40.50.150 182 396 2.3E-58 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS09835 d5b6296f2738e6ef3720c74a02669c57 397 PANTHER PTHR11061:SF12 7 397 1.9E-119 T 21-04-2016 VFU_RS09835 d5b6296f2738e6ef3720c74a02669c57 397 SUPERFAMILY SSF88697 3 72 5.47E-18 T 21-04-2016 IPR015947 PUA-like domain VFU_RS09835 d5b6296f2738e6ef3720c74a02669c57 397 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 397 68.957 T 21-04-2016 IPR023542 rRNA large subunit methyltransferase I GO:0008649 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VFU_RS09835 d5b6296f2738e6ef3720c74a02669c57 397 Gene3D G3DSA:2.30.130.10 3 71 8.5E-28 T 21-04-2016 IPR015947 PUA-like domain VFU_RS09835 d5b6296f2738e6ef3720c74a02669c57 397 Gene3D G3DSA:3.30.750.80 73 179 1.5E-36 T 21-04-2016 VFU_RS09835 d5b6296f2738e6ef3720c74a02669c57 397 PANTHER PTHR11061 7 397 1.9E-119 T 21-04-2016 VFU_RS11670 0146a7c0c5f0f2331fe4cd1f2df2058e 116 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 21-04-2016 IPR019808 Histidine triad, conserved site VFU_RS11670 0146a7c0c5f0f2331fe4cd1f2df2058e 116 PRINTS PR00332 Histidine triad family signature 6 22 1.07E-17 T 21-04-2016 IPR001310 Histidine triad (HIT) protein VFU_RS11670 0146a7c0c5f0f2331fe4cd1f2df2058e 116 PRINTS PR00332 Histidine triad family signature 27 45 1.07E-17 T 21-04-2016 IPR001310 Histidine triad (HIT) protein VFU_RS11670 0146a7c0c5f0f2331fe4cd1f2df2058e 116 PRINTS PR00332 Histidine triad family signature 95 105 1.07E-17 T 21-04-2016 IPR001310 Histidine triad (HIT) protein VFU_RS11670 0146a7c0c5f0f2331fe4cd1f2df2058e 116 PANTHER PTHR23089:SF2 3 112 1.2E-47 T 21-04-2016 VFU_RS11670 0146a7c0c5f0f2331fe4cd1f2df2058e 116 Pfam PF01230 HIT domain 12 109 5.5E-29 T 21-04-2016 IPR001310 Histidine triad (HIT) protein VFU_RS11670 0146a7c0c5f0f2331fe4cd1f2df2058e 116 SUPERFAMILY SSF54197 1 113 8.79E-35 T 21-04-2016 IPR011146 HIT-like domain GO:0003824 VFU_RS11670 0146a7c0c5f0f2331fe4cd1f2df2058e 116 PANTHER PTHR23089 3 112 1.2E-47 T 21-04-2016 IPR001310 Histidine triad (HIT) protein VFU_RS11670 0146a7c0c5f0f2331fe4cd1f2df2058e 116 Gene3D G3DSA:3.30.428.10 2 110 3.4E-35 T 21-04-2016 IPR011146 HIT-like domain GO:0003824 VFU_RS10305 6bb0c61f1d1f9c55105cd60745655f57 227 PANTHER PTHR14097:SF7 1 227 2.7E-48 T 21-04-2016 VFU_RS10305 6bb0c61f1d1f9c55105cd60745655f57 227 Pfam PF08732 HIM1 74 160 1.4E-11 T 21-04-2016 IPR014843 Protein Him1/Fmp52 VFU_RS10305 6bb0c61f1d1f9c55105cd60745655f57 227 PANTHER PTHR14097 1 227 2.7E-48 T 21-04-2016 VFU_RS10305 6bb0c61f1d1f9c55105cd60745655f57 227 Gene3D G3DSA:3.40.50.720 5 224 7.6E-38 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS10305 6bb0c61f1d1f9c55105cd60745655f57 227 SUPERFAMILY SSF51735 5 208 2.82E-33 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS19105 3e75f54aad1e40e6a6afc2d969b4dd6e 407 SMART SM00267 124 288 6.6E-43 T 21-04-2016 IPR000160 GGDEF domain VFU_RS19105 3e75f54aad1e40e6a6afc2d969b4dd6e 407 SUPERFAMILY SSF55073 140 287 1.65E-35 T 21-04-2016 IPR029787 Nucleotide cyclase VFU_RS19105 3e75f54aad1e40e6a6afc2d969b4dd6e 407 Gene3D G3DSA:3.30.70.270 136 296 2.0E-40 T 21-04-2016 VFU_RS19105 3e75f54aad1e40e6a6afc2d969b4dd6e 407 PANTHER PTHR10799 162 397 1.8E-47 T 21-04-2016 VFU_RS19105 3e75f54aad1e40e6a6afc2d969b4dd6e 407 Gene3D G3DSA:3.20.20.450 301 406 1.3E-22 T 21-04-2016 IPR001633 EAL domain VFU_RS19105 3e75f54aad1e40e6a6afc2d969b4dd6e 407 PANTHER PTHR10799:SF774 1 130 1.8E-47 T 21-04-2016 VFU_RS19105 3e75f54aad1e40e6a6afc2d969b4dd6e 407 PANTHER PTHR10799:SF774 162 397 1.8E-47 T 21-04-2016 VFU_RS19105 3e75f54aad1e40e6a6afc2d969b4dd6e 407 SUPERFAMILY SSF141868 305 405 5.49E-23 T 21-04-2016 IPR001633 EAL domain VFU_RS19105 3e75f54aad1e40e6a6afc2d969b4dd6e 407 Pfam PF00990 Diguanylate cyclase, GGDEF domain 135 279 1.9E-34 T 21-04-2016 IPR000160 GGDEF domain VFU_RS19105 3e75f54aad1e40e6a6afc2d969b4dd6e 407 PANTHER PTHR10799 1 130 1.8E-47 T 21-04-2016 VFU_RS19105 3e75f54aad1e40e6a6afc2d969b4dd6e 407 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 131 288 1.7E-31 T 21-04-2016 IPR000160 GGDEF domain VFU_RS19105 3e75f54aad1e40e6a6afc2d969b4dd6e 407 Pfam PF00563 EAL domain 305 407 3.9E-19 T 21-04-2016 IPR001633 EAL domain VFU_RS04225 80733aa719d2ceaae534035e18bd56cc 149 PANTHER PTHR38774:SF1 3 149 2.1E-55 T 21-04-2016 VFU_RS04225 80733aa719d2ceaae534035e18bd56cc 149 PANTHER PTHR38774 3 149 2.1E-55 T 21-04-2016 VFU_RS04225 80733aa719d2ceaae534035e18bd56cc 149 Pfam PF06853 Protein of unknown function (DUF1249) 28 140 7.7E-39 T 21-04-2016 IPR009659 Protein of unknown function DUF1249 VFU_RS02130 549bf8515b49ada4627b129310de6305 80 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 75 24.797 T 21-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 VFU_RS02130 549bf8515b49ada4627b129310de6305 80 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 1.0E-21 T 21-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 VFU_RS02130 549bf8515b49ada4627b129310de6305 80 PANTHER PTHR33162 1 60 1.6E-21 T 21-04-2016 VFU_RS02130 549bf8515b49ada4627b129310de6305 80 Pfam PF02416 mttA/Hcf106 family 4 55 7.3E-14 T 21-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 VFU_RS13085 bcbd0718040f8d99ede6fa21d298a646 294 Gene3D G3DSA:1.10.600.10 4 292 2.3E-88 T 21-04-2016 IPR008949 Isoprenoid synthase domain VFU_RS13085 bcbd0718040f8d99ede6fa21d298a646 294 Pfam PF00348 Polyprenyl synthetase 31 261 2.0E-56 T 21-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 VFU_RS13085 bcbd0718040f8d99ede6fa21d298a646 294 PANTHER PTHR12001:SF23 13 273 1.2E-102 T 21-04-2016 VFU_RS13085 bcbd0718040f8d99ede6fa21d298a646 294 PANTHER PTHR12001 13 273 1.2E-102 T 21-04-2016 IPR017446 Polyprenyl synthetase-related VFU_RS13085 bcbd0718040f8d99ede6fa21d298a646 294 SUPERFAMILY SSF48576 4 289 3.04E-85 T 21-04-2016 IPR008949 Isoprenoid synthase domain VFU_RS13085 bcbd0718040f8d99ede6fa21d298a646 294 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 79 95 - T 21-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 VFU_RS13085 bcbd0718040f8d99ede6fa21d298a646 294 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 21-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 VFU_RS13030 b9d0f29d7ee503b37fbdebadd73bfa0c 283 Pfam PF14793 Domain of unknown function (DUF4478) 3 109 6.3E-50 T 21-04-2016 IPR027820 Domain of unknown function DUF4478 VFU_RS13030 b9d0f29d7ee503b37fbdebadd73bfa0c 283 Gene3D G3DSA:3.40.50.450 123 240 1.1E-42 T 21-04-2016 VFU_RS13030 b9d0f29d7ee503b37fbdebadd73bfa0c 283 Pfam PF03641 Possible lysine decarboxylase 187 241 5.6E-6 T 21-04-2016 IPR031100 LOG family VFU_RS13030 b9d0f29d7ee503b37fbdebadd73bfa0c 283 PANTHER PTHR31223 83 240 5.3E-96 T 21-04-2016 VFU_RS13030 b9d0f29d7ee503b37fbdebadd73bfa0c 283 PANTHER PTHR31223:SF12 83 240 5.3E-96 T 21-04-2016 VFU_RS13030 b9d0f29d7ee503b37fbdebadd73bfa0c 283 Gene3D G3DSA:3.30.1850.10 1 113 2.3E-56 T 21-04-2016 IPR027820 Domain of unknown function DUF4478 VFU_RS13030 b9d0f29d7ee503b37fbdebadd73bfa0c 283 SUPERFAMILY SSF102405 119 240 2.75E-20 T 21-04-2016 VFU_RS13365 93e015b25ae8dbf46d9bd0c26b1739dc 197 Pfam PF01184 GPR1/FUN34/yaaH family 3 181 1.4E-35 T 21-04-2016 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 VFU_RS13365 93e015b25ae8dbf46d9bd0c26b1739dc 197 PANTHER PTHR30178 1 195 2.8E-134 T 21-04-2016 VFU_RS13365 93e015b25ae8dbf46d9bd0c26b1739dc 197 PANTHER PTHR30178:SF6 1 195 2.8E-134 T 21-04-2016 VFU_RS13365 93e015b25ae8dbf46d9bd0c26b1739dc 197 ProSitePatterns PS01114 GPR1/FUN34/yaaH family signature. 7 16 - T 21-04-2016 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 VFU_RS08455 7e8f86e0d88138c10da6b7a334416da9 535 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 371 398 3.9E-21 T 21-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VFU_RS08455 7e8f86e0d88138c10da6b7a334416da9 535 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 400 429 3.9E-21 T 21-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VFU_RS08455 7e8f86e0d88138c10da6b7a334416da9 535 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 181 201 3.9E-21 T 21-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VFU_RS08455 7e8f86e0d88138c10da6b7a334416da9 535 Gene3D G3DSA:3.30.450.20 26 176 8.4E-35 T 21-04-2016 VFU_RS08455 7e8f86e0d88138c10da6b7a334416da9 535 SMART SM00304 206 258 2.6E-10 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS08455 7e8f86e0d88138c10da6b7a334416da9 535 SMART SM00304 259 311 25.0 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS08455 7e8f86e0d88138c10da6b7a334416da9 535 Pfam PF00672 HAMP domain 187 253 2.1E-15 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS08455 7e8f86e0d88138c10da6b7a334416da9 535 SMART SM01049 36 125 4.7E-20 T 21-04-2016 IPR033480 Single Cache domain 2 VFU_RS08455 7e8f86e0d88138c10da6b7a334416da9 535 Pfam PF17200 Single Cache domain 2 40 182 2.1E-27 T 21-04-2016 IPR033480 Single Cache domain 2 VFU_RS08455 7e8f86e0d88138c10da6b7a334416da9 535 Gene3D G3DSA:1.10.287.950 288 504 4.5E-56 T 21-04-2016 VFU_RS08455 7e8f86e0d88138c10da6b7a334416da9 535 SMART SM00283 273 534 2.2E-66 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VFU_RS08455 7e8f86e0d88138c10da6b7a334416da9 535 PANTHER PTHR32089:SF64 77 535 1.2E-151 T 21-04-2016 VFU_RS08455 7e8f86e0d88138c10da6b7a334416da9 535 SUPERFAMILY SSF58104 226 535 8.63E-71 T 21-04-2016 VFU_RS08455 7e8f86e0d88138c10da6b7a334416da9 535 PANTHER PTHR32089 77 535 1.2E-151 T 21-04-2016 VFU_RS08455 7e8f86e0d88138c10da6b7a334416da9 535 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 323 530 8.7E-44 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VFU_RS15060 b09afbf3a52b7bfcda547bcbed30c91c 859 Pfam PF11874 Domain of unknown function (DUF3394) 674 853 1.8E-68 T 21-04-2016 IPR021814 Protein of unknown function DUF3394 VFU_RS15060 b09afbf3a52b7bfcda547bcbed30c91c 859 PANTHER PTHR33362 1 351 5.9E-303 T 21-04-2016 VFU_RS15060 b09afbf3a52b7bfcda547bcbed30c91c 859 PANTHER PTHR33362 427 752 5.9E-303 T 21-04-2016 VFU_RS15060 b09afbf3a52b7bfcda547bcbed30c91c 859 PANTHER PTHR33362:SF1 1 351 5.9E-303 T 21-04-2016 VFU_RS15060 b09afbf3a52b7bfcda547bcbed30c91c 859 PANTHER PTHR33362:SF1 427 752 5.9E-303 T 21-04-2016 VFU_RS15060 b09afbf3a52b7bfcda547bcbed30c91c 859 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 33 724 3.6E-212 T 21-04-2016 IPR011853 TRAP transporter, 4TM/12TM fusion protein VFU_RS15060 b09afbf3a52b7bfcda547bcbed30c91c 859 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 135 667 2.6E-78 T 21-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VFU_RS07420 5aa2d703e1664542dfc5f34b72014c6d 479 Gene3D G3DSA:3.30.1360.60 2 83 9.2E-28 T 21-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VFU_RS07420 5aa2d703e1664542dfc5f34b72014c6d 479 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 164 453 6.0E-92 T 21-04-2016 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 VFU_RS07420 5aa2d703e1664542dfc5f34b72014c6d 479 TIGRFAM TIGR01996 PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component 3 465 4.3E-195 T 21-04-2016 IPR010973 Phosphotransferase system, sucrose-specific IIBC component GO:0008982|GO:0009401|GO:0016021 VFU_RS07420 5aa2d703e1664542dfc5f34b72014c6d 479 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 21-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VFU_RS07420 5aa2d703e1664542dfc5f34b72014c6d 479 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 28 110 2.3E-23 T 21-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VFU_RS07420 5aa2d703e1664542dfc5f34b72014c6d 479 Pfam PF02378 Phosphotransferase system, EIIC 110 410 3.0E-50 T 21-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VFU_RS07420 5aa2d703e1664542dfc5f34b72014c6d 479 Pfam PF00367 phosphotransferase system, EIIB 8 41 8.1E-14 T 21-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VFU_RS07420 5aa2d703e1664542dfc5f34b72014c6d 479 SUPERFAMILY SSF55604 6 82 8.63E-21 T 21-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VFU_RS07420 5aa2d703e1664542dfc5f34b72014c6d 479 PANTHER PTHR30175:SF7 1 477 6.4E-229 T 21-04-2016 VFU_RS07420 5aa2d703e1664542dfc5f34b72014c6d 479 PANTHER PTHR30175 1 477 6.4E-229 T 21-04-2016 VFU_RS02865 81af3bc4499956d2e51c75fc380c2637 335 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 329 6.4E-166 T 21-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 VFU_RS02865 81af3bc4499956d2e51c75fc380c2637 335 PIRSF PIRSF004532 1 331 1.4E-134 T 21-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 VFU_RS02865 81af3bc4499956d2e51c75fc380c2637 335 SUPERFAMILY SSF56655 1 324 6.1E-106 T 21-04-2016 VFU_RS02865 81af3bc4499956d2e51c75fc380c2637 335 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 321 3.9E-129 T 21-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 VFU_RS02865 81af3bc4499956d2e51c75fc380c2637 335 PANTHER PTHR30447 1 335 1.6E-175 T 21-04-2016 VFU_RS02865 81af3bc4499956d2e51c75fc380c2637 335 Gene3D G3DSA:3.30.540.10 171 328 7.9E-44 T 21-04-2016 VFU_RS02865 81af3bc4499956d2e51c75fc380c2637 335 Gene3D G3DSA:3.30.540.10 1 170 9.8E-67 T 21-04-2016 VFU_RS02865 81af3bc4499956d2e51c75fc380c2637 335 PANTHER PTHR30447:SF0 1 335 1.6E-175 T 21-04-2016 VFU_RS03995 51655a7d168e0d156b73b990fe195ba6 604 PANTHER PTHR24096:SF193 8 600 2.0E-226 T 21-04-2016 VFU_RS03995 51655a7d168e0d156b73b990fe195ba6 604 Gene3D G3DSA:3.30.300.30 467 587 9.2E-4 T 21-04-2016 VFU_RS03995 51655a7d168e0d156b73b990fe195ba6 604 Gene3D G3DSA:2.30.38.10 401 460 6.4E-20 T 21-04-2016 VFU_RS03995 51655a7d168e0d156b73b990fe195ba6 604 SUPERFAMILY SSF56801 7 285 5.23E-113 T 21-04-2016 VFU_RS03995 51655a7d168e0d156b73b990fe195ba6 604 SUPERFAMILY SSF56801 336 596 5.23E-113 T 21-04-2016 VFU_RS03995 51655a7d168e0d156b73b990fe195ba6 604 Pfam PF00501 AMP-binding enzyme 14 466 3.4E-98 T 21-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VFU_RS03995 51655a7d168e0d156b73b990fe195ba6 604 Gene3D G3DSA:3.40.50.980 333 388 4.2E-31 T 21-04-2016 VFU_RS03995 51655a7d168e0d156b73b990fe195ba6 604 Gene3D G3DSA:3.40.50.980 189 280 4.2E-31 T 21-04-2016 VFU_RS03995 51655a7d168e0d156b73b990fe195ba6 604 ProSitePatterns PS00455 Putative AMP-binding domain signature. 183 194 - T 21-04-2016 IPR020845 AMP-binding, conserved site VFU_RS03995 51655a7d168e0d156b73b990fe195ba6 604 Gene3D G3DSA:3.40.50.980 8 188 5.5E-32 T 21-04-2016 VFU_RS03995 51655a7d168e0d156b73b990fe195ba6 604 PANTHER PTHR24096 8 600 2.0E-226 T 21-04-2016 VFU_RS08520 9b0065a50dd98d332e2cc975e3a6e924 235 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 9 235 38.476 T 21-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 VFU_RS08520 9b0065a50dd98d332e2cc975e3a6e924 235 SUPERFAMILY SSF53335 15 231 7.33E-46 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS08520 9b0065a50dd98d332e2cc975e3a6e924 235 PANTHER PTHR10108 5 233 2.0E-154 T 21-04-2016 VFU_RS08520 9b0065a50dd98d332e2cc975e3a6e924 235 Pfam PF13489 Methyltransferase domain 52 194 3.2E-25 T 21-04-2016 VFU_RS08520 9b0065a50dd98d332e2cc975e3a6e924 235 PANTHER PTHR10108:SF910 5 233 2.0E-154 T 21-04-2016 VFU_RS08520 9b0065a50dd98d332e2cc975e3a6e924 235 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 11 229 2.3E-87 T 21-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 VFU_RS08520 9b0065a50dd98d332e2cc975e3a6e924 235 Gene3D G3DSA:3.40.50.150 23 220 2.2E-48 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS11820 ffe69cdda1041ea0fc11242aa4bd3696 333 PANTHER PTHR33376:SF7 8 333 1.6E-163 T 21-04-2016 VFU_RS11820 ffe69cdda1041ea0fc11242aa4bd3696 333 PANTHER PTHR33376 8 333 1.6E-163 T 21-04-2016 VFU_RS11820 ffe69cdda1041ea0fc11242aa4bd3696 333 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 34 318 1.6E-106 T 21-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 VFU_RS11820 ffe69cdda1041ea0fc11242aa4bd3696 333 PIRSF PIRSF006470 1 333 6.0E-123 T 21-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 VFU_RS11820 ffe69cdda1041ea0fc11242aa4bd3696 333 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 34 284 4.7E-81 T 21-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 VFU_RS04900 e8f04c96716cf846d335d1901eda04a0 175 Gene3D G3DSA:3.90.950.10 2 170 9.4E-64 T 21-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like VFU_RS04900 e8f04c96716cf846d335d1901eda04a0 175 PANTHER PTHR34699:SF3 1 174 3.1E-99 T 21-04-2016 VFU_RS04900 e8f04c96716cf846d335d1901eda04a0 175 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 6 169 7.4E-42 T 21-04-2016 IPR002786 Non-canonical purine NTP phosphatase VFU_RS04900 e8f04c96716cf846d335d1901eda04a0 175 Pfam PF01931 Protein of unknown function DUF84 7 165 1.4E-57 T 21-04-2016 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 VFU_RS04900 e8f04c96716cf846d335d1901eda04a0 175 SUPERFAMILY SSF52972 1 171 3.05E-61 T 21-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like VFU_RS04900 e8f04c96716cf846d335d1901eda04a0 175 PANTHER PTHR34699 1 174 3.1E-99 T 21-04-2016 VFU_RS04900 e8f04c96716cf846d335d1901eda04a0 175 Hamap MF_00648 Non-canonical purine NTP phosphatase. 2 171 30.218 T 21-04-2016 IPR002786 Non-canonical purine NTP phosphatase VFU_RS08970 27f481da3c235d0152342e81a12e4cb4 162 Gene3D G3DSA:2.60.120.370 3 159 4.8E-39 T 21-04-2016 IPR004375 YhcH/YjgK/YiaL family VFU_RS08970 27f481da3c235d0152342e81a12e4cb4 162 Pfam PF04074 Domain of unknown function (DUF386) 3 156 1.8E-36 T 21-04-2016 IPR004375 YhcH/YjgK/YiaL family VFU_RS08970 27f481da3c235d0152342e81a12e4cb4 162 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 2 158 2.3E-34 T 21-04-2016 IPR004375 YhcH/YjgK/YiaL family VFU_RS08970 27f481da3c235d0152342e81a12e4cb4 162 SUPERFAMILY SSF51197 21 158 1.46E-34 T 21-04-2016 VFU_RS08970 27f481da3c235d0152342e81a12e4cb4 162 PANTHER PTHR34986:SF1 2 162 9.3E-56 T 21-04-2016 VFU_RS08970 27f481da3c235d0152342e81a12e4cb4 162 PANTHER PTHR34986 2 162 9.3E-56 T 21-04-2016 VFU_RS03025 05133720bd200a188f48b716179be33e 324 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 15 319 7.6E-127 T 21-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 VFU_RS03025 05133720bd200a188f48b716179be33e 324 Gene3D G3DSA:3.30.930.10 13 320 6.8E-69 T 21-04-2016 VFU_RS03025 05133720bd200a188f48b716179be33e 324 SUPERFAMILY SSF55681 11 322 1.15E-80 T 21-04-2016 VFU_RS03025 05133720bd200a188f48b716179be33e 324 PANTHER PTHR22594 7 323 2.3E-137 T 21-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VFU_RS03025 05133720bd200a188f48b716179be33e 324 Pfam PF00152 tRNA synthetases class II (D, K and N) 13 320 3.4E-43 T 21-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VFU_RS03025 05133720bd200a188f48b716179be33e 324 PANTHER PTHR22594:SF7 7 323 2.3E-137 T 21-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 VFU_RS03025 05133720bd200a188f48b716179be33e 324 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 1 324 52.797 T 21-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 VFU_RS14640 edd146dd8b2a6f264da874eaa3feef38 602 Pfam PF00196 Bacterial regulatory proteins, luxR family 573 601 1.1E-5 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VFU_RS14640 edd146dd8b2a6f264da874eaa3feef38 602 Gene3D G3DSA:1.10.10.10 571 600 2.0E-6 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS14640 edd146dd8b2a6f264da874eaa3feef38 602 SUPERFAMILY SSF46894 571 601 6.04E-5 T 21-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VFU_RS07000 d2be31a719ba444383bf6e4537c53fe4 247 Pfam PF02108 Flagellar assembly protein FliH 104 225 1.8E-27 T 21-04-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE VFU_RS07000 d2be31a719ba444383bf6e4537c53fe4 247 SUPERFAMILY SSF160527 131 232 1.14E-5 T 21-04-2016 VFU_RS07000 d2be31a719ba444383bf6e4537c53fe4 247 PANTHER PTHR34982 21 247 3.7E-23 T 21-04-2016 VFU_RS04080 2e5c76ec0dcc77cd9b0705c2ac1e5a73 209 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 98 9.2E-34 T 21-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 VFU_RS04080 2e5c76ec0dcc77cd9b0705c2ac1e5a73 209 SUPERFAMILY SSF89069 4 67 3.01E-20 T 21-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 VFU_RS04080 2e5c76ec0dcc77cd9b0705c2ac1e5a73 209 PIRSF PIRSF016938 1 201 6.4E-33 T 21-04-2016 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0006950|GO:0016989 VFU_RS04080 2e5c76ec0dcc77cd9b0705c2ac1e5a73 209 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 140 192 4.9E-21 T 21-04-2016 IPR005573 Anti sigma-E protein RseA, C-terminal VFU_RS04080 2e5c76ec0dcc77cd9b0705c2ac1e5a73 209 PANTHER PTHR38104 1 207 8.6E-60 T 21-04-2016 VFU_RS12330 f59f65e2d84c37184d92d9de5ba4b11f 82 PANTHER PTHR36931 1 82 6.3E-40 T 21-04-2016 VFU_RS12330 f59f65e2d84c37184d92d9de5ba4b11f 82 Pfam PF03692 Putative zinc- or iron-chelating domain 3 59 1.9E-5 T 21-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein VFU_RS11635 0ab61ffde14f5cdb4924862da8b6c5bf 179 Gene3D G3DSA:3.40.630.30 2 177 9.5E-46 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase VFU_RS11635 0ab61ffde14f5cdb4924862da8b6c5bf 179 PANTHER PTHR13256:SF43 1 179 8.9E-47 T 21-04-2016 VFU_RS11635 0ab61ffde14f5cdb4924862da8b6c5bf 179 SUPERFAMILY SSF55729 3 177 1.34E-44 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase VFU_RS11635 0ab61ffde14f5cdb4924862da8b6c5bf 179 Pfam PF13302 Acetyltransferase (GNAT) domain 11 152 1.7E-22 T 21-04-2016 IPR000182 GNAT domain GO:0008080 VFU_RS11635 0ab61ffde14f5cdb4924862da8b6c5bf 179 PANTHER PTHR13256 1 179 8.9E-47 T 21-04-2016 VFU_RS14870 47ae3f7e582065df46b363dbc66df819 143 Pfam PF14467 Domain of unknown function (DUF4426) 25 142 2.5E-48 T 21-04-2016 IPR025218 Domain of unknown function DUF4426 VFU_RS07410 20d3da0b489c9aebdaf86c517d4867d6 229 Gene3D G3DSA:1.10.10.10 125 220 3.5E-24 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS07410 20d3da0b489c9aebdaf86c517d4867d6 229 SMART SM00862 145 219 1.8E-15 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VFU_RS07410 20d3da0b489c9aebdaf86c517d4867d6 229 SMART SM00448 2 113 4.7E-34 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS07410 20d3da0b489c9aebdaf86c517d4867d6 229 PANTHER PTHR26402:SF552 2 222 8.6E-72 T 21-04-2016 VFU_RS07410 20d3da0b489c9aebdaf86c517d4867d6 229 SUPERFAMILY SSF46894 124 219 3.97E-21 T 21-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VFU_RS07410 20d3da0b489c9aebdaf86c517d4867d6 229 PANTHER PTHR26402 2 222 8.6E-72 T 21-04-2016 VFU_RS07410 20d3da0b489c9aebdaf86c517d4867d6 229 Gene3D G3DSA:3.40.50.2300 2 123 1.6E-33 T 21-04-2016 VFU_RS07410 20d3da0b489c9aebdaf86c517d4867d6 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 218 6.3E-17 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VFU_RS07410 20d3da0b489c9aebdaf86c517d4867d6 229 SUPERFAMILY SSF52172 3 119 3.98E-35 T 21-04-2016 IPR011006 CheY-like superfamily VFU_RS07410 20d3da0b489c9aebdaf86c517d4867d6 229 Pfam PF00072 Response regulator receiver domain 5 114 1.6E-25 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS09740 a83395a3e9a39a07e449a436b15005bd 444 Gene3D G3DSA:3.30.70.270 271 428 9.2E-55 T 21-04-2016 VFU_RS09740 a83395a3e9a39a07e449a436b15005bd 444 Pfam PF00672 HAMP domain 171 238 1.1E-7 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS09740 a83395a3e9a39a07e449a436b15005bd 444 SUPERFAMILY SSF158472 196 240 4.58E-5 T 21-04-2016 VFU_RS09740 a83395a3e9a39a07e449a436b15005bd 444 SUPERFAMILY SSF55073 274 428 7.06E-48 T 21-04-2016 IPR029787 Nucleotide cyclase VFU_RS09740 a83395a3e9a39a07e449a436b15005bd 444 PANTHER PTHR10799 302 426 1.5E-41 T 21-04-2016 VFU_RS09740 a83395a3e9a39a07e449a436b15005bd 444 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 267 428 3.0E-45 T 21-04-2016 IPR000160 GGDEF domain VFU_RS09740 a83395a3e9a39a07e449a436b15005bd 444 SMART SM00267 258 430 1.6E-52 T 21-04-2016 IPR000160 GGDEF domain VFU_RS09740 a83395a3e9a39a07e449a436b15005bd 444 SMART SM00304 189 242 0.0035 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS09740 a83395a3e9a39a07e449a436b15005bd 444 Pfam PF00990 Diguanylate cyclase, GGDEF domain 271 426 2.7E-46 T 21-04-2016 IPR000160 GGDEF domain VFU_RS09740 a83395a3e9a39a07e449a436b15005bd 444 PANTHER PTHR10799:SF750 302 426 1.5E-41 T 21-04-2016 VFU_RS05795 348b40c679197faba6c2b700f1c61dbc 344 PIRSF PIRSF026343 4 339 1.1E-130 T 21-04-2016 IPR014524 Outer membrane protein assembly factor BamC VFU_RS05795 348b40c679197faba6c2b700f1c61dbc 344 Pfam PF06804 NlpB/DapX lipoprotein 36 335 2.7E-103 T 21-04-2016 IPR010653 NlpB/DapX lipoprotein VFU_RS05795 348b40c679197faba6c2b700f1c61dbc 344 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 4 337 35.001 T 21-04-2016 IPR014524 Outer membrane protein assembly factor BamC VFU_RS00625 228d300583b35959c9076173519a488e 295 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 3.1E-153 T 21-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 VFU_RS00625 228d300583b35959c9076173519a488e 295 Pfam PF00483 Nucleotidyl transferase 2 238 2.1E-71 T 21-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 VFU_RS00625 228d300583b35959c9076173519a488e 295 PANTHER PTHR22572 2 294 6.0E-162 T 21-04-2016 VFU_RS00625 228d300583b35959c9076173519a488e 295 Gene3D G3DSA:3.90.550.10 1 274 7.1E-67 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VFU_RS00625 228d300583b35959c9076173519a488e 295 PANTHER PTHR22572:SF105 2 294 6.0E-162 T 21-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 VFU_RS00625 228d300583b35959c9076173519a488e 295 SUPERFAMILY SSF53448 1 287 7.37E-91 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VFU_RS15120 7e132b5a07a6a78797a1024a536e3125 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 1.6E-63 T 21-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 VFU_RS15120 7e132b5a07a6a78797a1024a536e3125 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 1.6E-63 T 21-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 VFU_RS15120 7e132b5a07a6a78797a1024a536e3125 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 1.6E-63 T 21-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 VFU_RS15120 7e132b5a07a6a78797a1024a536e3125 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 1.6E-63 T 21-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 VFU_RS15120 7e132b5a07a6a78797a1024a536e3125 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 1.6E-63 T 21-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 VFU_RS15120 7e132b5a07a6a78797a1024a536e3125 347 SUPERFAMILY SSF53067 154 340 3.17E-51 T 21-04-2016 VFU_RS15120 7e132b5a07a6a78797a1024a536e3125 347 Gene3D G3DSA:3.30.420.40 267 321 1.6E-35 T 21-04-2016 VFU_RS15120 7e132b5a07a6a78797a1024a536e3125 347 Gene3D G3DSA:3.30.420.40 164 190 1.6E-35 T 21-04-2016 VFU_RS15120 7e132b5a07a6a78797a1024a536e3125 347 SUPERFAMILY SSF53067 9 152 1.73E-37 T 21-04-2016 VFU_RS15120 7e132b5a07a6a78797a1024a536e3125 347 Gene3D G3DSA:3.90.640.10 191 263 3.1E-31 T 21-04-2016 VFU_RS15120 7e132b5a07a6a78797a1024a536e3125 347 PANTHER PTHR19375:SF117 9 336 1.7E-187 T 21-04-2016 VFU_RS15120 7e132b5a07a6a78797a1024a536e3125 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 5.4E-164 T 21-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 VFU_RS15120 7e132b5a07a6a78797a1024a536e3125 347 Gene3D G3DSA:3.30.420.40 9 163 2.7E-46 T 21-04-2016 VFU_RS15120 7e132b5a07a6a78797a1024a536e3125 347 PANTHER PTHR19375 9 336 1.7E-187 T 21-04-2016 VFU_RS15120 7e132b5a07a6a78797a1024a536e3125 347 Pfam PF06723 MreB/Mbl protein 11 338 1.7E-148 T 21-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 VFU_RS08765 3bcb13c3e94c7e37639f30a05a0b612b 292 SUPERFAMILY SSF103481 185 280 2.35E-7 T 21-04-2016 VFU_RS08765 3bcb13c3e94c7e37639f30a05a0b612b 292 PANTHER PTHR22911:SF37 1 286 4.8E-95 T 21-04-2016 VFU_RS08765 3bcb13c3e94c7e37639f30a05a0b612b 292 Pfam PF00892 EamA-like transporter family 146 275 9.9E-15 T 21-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VFU_RS08765 3bcb13c3e94c7e37639f30a05a0b612b 292 PANTHER PTHR22911 1 286 4.8E-95 T 21-04-2016 VFU_RS08765 3bcb13c3e94c7e37639f30a05a0b612b 292 SUPERFAMILY SSF103481 45 134 8.76E-6 T 21-04-2016 VFU_RS07460 c34c11ba694c74667839389972866ef6 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.1E-42 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS07460 c34c11ba694c74667839389972866ef6 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.1E-42 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS07460 c34c11ba694c74667839389972866ef6 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.1E-42 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS07460 c34c11ba694c74667839389972866ef6 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 2.1E-42 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS07460 c34c11ba694c74667839389972866ef6 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.1E-42 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS07460 c34c11ba694c74667839389972866ef6 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.1E-42 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS07460 c34c11ba694c74667839389972866ef6 241 TIGRFAM TIGR01831 fabG_rel: putative 3-oxoacyl-(acyl-carrier-protein) reductase 5 241 4.4E-127 T 21-04-2016 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 VFU_RS07460 c34c11ba694c74667839389972866ef6 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 3.1E-10 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS07460 c34c11ba694c74667839389972866ef6 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 3.1E-10 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS07460 c34c11ba694c74667839389972866ef6 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 3.1E-10 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS07460 c34c11ba694c74667839389972866ef6 241 SUPERFAMILY SSF51735 3 240 1.47E-73 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS07460 c34c11ba694c74667839389972866ef6 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 240 1.2E-56 T 21-04-2016 VFU_RS07460 c34c11ba694c74667839389972866ef6 241 Gene3D G3DSA:3.40.50.720 4 240 1.6E-73 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS07460 c34c11ba694c74667839389972866ef6 241 PANTHER PTHR24322:SF635 153 185 1.0E-48 T 21-04-2016 VFU_RS07460 c34c11ba694c74667839389972866ef6 241 PANTHER PTHR24322:SF635 7 137 1.0E-48 T 21-04-2016 VFU_RS07460 c34c11ba694c74667839389972866ef6 241 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 194 0.008 T 21-04-2016 VFU_RS07460 c34c11ba694c74667839389972866ef6 241 PANTHER PTHR24322 153 185 1.0E-48 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS07460 c34c11ba694c74667839389972866ef6 241 PANTHER PTHR24322 7 137 1.0E-48 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS04170 45ccf2ddba3332a8be1439ae824996d9 295 Pfam PF16537 Type II secretion system protein B 230 289 1.1E-25 T 21-04-2016 IPR032389 Type II secretion system protein B VFU_RS06985 bbb75639eddc22ed4c972416f73a27ea 118 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 8 118 14.188 T 21-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VFU_RS06985 bbb75639eddc22ed4c972416f73a27ea 118 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 46 117 5.7E-14 T 21-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VFU_RS06985 bbb75639eddc22ed4c972416f73a27ea 118 Pfam PF02049 Flagellar hook-basal body complex protein FliE 44 118 2.0E-23 T 21-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VFU_RS06985 bbb75639eddc22ed4c972416f73a27ea 118 PANTHER PTHR34653 6 118 4.5E-16 T 21-04-2016 VFU_RS06985 bbb75639eddc22ed4c972416f73a27ea 118 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 82 98 8.2E-10 T 21-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VFU_RS06985 bbb75639eddc22ed4c972416f73a27ea 118 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 48 64 8.2E-10 T 21-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VFU_RS06985 bbb75639eddc22ed4c972416f73a27ea 118 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 103 116 8.2E-10 T 21-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VFU_RS00290 e3743a589b1f641490e58fbed33c92f9 347 Gene3D G3DSA:3.30.43.10 8 71 2.1E-21 T 21-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 VFU_RS00290 e3743a589b1f641490e58fbed33c92f9 347 SUPERFAMILY SSF56194 206 340 1.24E-48 T 21-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VFU_RS00290 e3743a589b1f641490e58fbed33c92f9 347 PANTHER PTHR21071:SF6 1 339 7.0E-166 T 21-04-2016 VFU_RS00290 e3743a589b1f641490e58fbed33c92f9 347 SUPERFAMILY SSF56176 8 199 1.83E-41 T 21-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 VFU_RS00290 e3743a589b1f641490e58fbed33c92f9 347 Gene3D G3DSA:3.30.465.10 77 232 1.3E-48 T 21-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 VFU_RS00290 e3743a589b1f641490e58fbed33c92f9 347 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 347 79.56 T 21-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VFU_RS00290 e3743a589b1f641490e58fbed33c92f9 347 Gene3D G3DSA:3.90.78.10 233 339 1.3E-43 T 21-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VFU_RS00290 e3743a589b1f641490e58fbed33c92f9 347 PANTHER PTHR21071 1 339 7.0E-166 T 21-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VFU_RS00290 e3743a589b1f641490e58fbed33c92f9 347 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 209 330 3.5E-33 T 21-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VFU_RS00290 e3743a589b1f641490e58fbed33c92f9 347 Pfam PF01565 FAD binding domain 23 142 2.3E-17 T 21-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 VFU_RS00290 e3743a589b1f641490e58fbed33c92f9 347 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 9 332 1.2E-89 T 21-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VFU_RS14135 b5c7897161fbd31a07de9ea6e4b306dd 206 Pfam PF03458 UPF0126 domain 95 165 1.1E-18 T 21-04-2016 IPR005115 Uncharacterised domain UPF0126 VFU_RS14135 b5c7897161fbd31a07de9ea6e4b306dd 206 Pfam PF03458 UPF0126 domain 8 81 2.7E-22 T 21-04-2016 IPR005115 Uncharacterised domain UPF0126 VFU_RS14135 b5c7897161fbd31a07de9ea6e4b306dd 206 PANTHER PTHR30506 1 206 8.3E-94 T 21-04-2016 VFU_RS14135 b5c7897161fbd31a07de9ea6e4b306dd 206 PANTHER PTHR30506:SF3 1 206 8.3E-94 T 21-04-2016 VFU_RS13775 cc2de6db8531e0f6aeeacac2900d75a8 322 PANTHER PTHR37955:SF1 1 319 8.3E-94 T 21-04-2016 VFU_RS13775 cc2de6db8531e0f6aeeacac2900d75a8 322 Pfam PF03595 Voltage-dependent anion channel 19 308 8.4E-29 T 21-04-2016 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 VFU_RS13775 cc2de6db8531e0f6aeeacac2900d75a8 322 PANTHER PTHR37955 1 319 8.3E-94 T 21-04-2016 VFU_RS04060 b9daddfbfa203bceb315fa438d6bef47 86 Gene3D G3DSA:1.10.150.250 3 83 5.8E-30 T 21-04-2016 IPR005631 Flavinator of succinate dehydrogenase VFU_RS04060 b9daddfbfa203bceb315fa438d6bef47 86 SUPERFAMILY SSF109910 3 79 1.57E-26 T 21-04-2016 IPR005631 Flavinator of succinate dehydrogenase VFU_RS04060 b9daddfbfa203bceb315fa438d6bef47 86 PANTHER PTHR12469:SF3 4 62 1.7E-26 T 21-04-2016 VFU_RS04060 b9daddfbfa203bceb315fa438d6bef47 86 Pfam PF03937 Flavinator of succinate dehydrogenase 7 77 2.7E-25 T 21-04-2016 IPR005631 Flavinator of succinate dehydrogenase VFU_RS04060 b9daddfbfa203bceb315fa438d6bef47 86 PANTHER PTHR12469 4 62 1.7E-26 T 21-04-2016 VFU_RS06930 0b39338fb1ede99b059563d8f10cc71b 275 Pfam PF00700 Bacterial flagellin C-terminal helical region 190 274 2.7E-27 T 21-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VFU_RS06930 0b39338fb1ede99b059563d8f10cc71b 275 PANTHER PTHR30244 2 275 1.8E-93 T 21-04-2016 VFU_RS06930 0b39338fb1ede99b059563d8f10cc71b 275 SUPERFAMILY SSF64518 1 275 1.44E-74 T 21-04-2016 VFU_RS06930 0b39338fb1ede99b059563d8f10cc71b 275 PRINTS PR00207 Flagellin signature 76 95 3.4E-18 T 21-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VFU_RS06930 0b39338fb1ede99b059563d8f10cc71b 275 PRINTS PR00207 Flagellin signature 37 54 3.4E-18 T 21-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VFU_RS06930 0b39338fb1ede99b059563d8f10cc71b 275 PRINTS PR00207 Flagellin signature 111 134 3.4E-18 T 21-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VFU_RS06930 0b39338fb1ede99b059563d8f10cc71b 275 Pfam PF00669 Bacterial flagellin N-terminal helical region 6 142 1.1E-37 T 21-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VFU_RS06930 0b39338fb1ede99b059563d8f10cc71b 275 PANTHER PTHR30244:SF1 2 275 1.8E-93 T 21-04-2016 VFU_RS06930 0b39338fb1ede99b059563d8f10cc71b 275 Gene3D G3DSA:1.20.1330.10 55 230 8.1E-46 T 21-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VFU_RS03120 5878c99b56879d7f34763dc1af8883c8 170 PIRSF PIRSF016481 2 170 2.3E-55 T 21-04-2016 IPR007446 Pilus assembly protein PilP VFU_RS03120 5878c99b56879d7f34763dc1af8883c8 170 Pfam PF04351 Pilus assembly protein, PilP 24 169 5.2E-42 T 21-04-2016 IPR007446 Pilus assembly protein PilP VFU_RS07390 32077fbcf293ea73bb5945b7016d3d79 399 PANTHER PTHR30386 17 379 8.0E-189 T 21-04-2016 VFU_RS07390 32077fbcf293ea73bb5945b7016d3d79 399 PANTHER PTHR30386:SF6 17 379 8.0E-189 T 21-04-2016 VFU_RS07390 32077fbcf293ea73bb5945b7016d3d79 399 SUPERFAMILY SSF111369 59 150 1.57E-11 T 21-04-2016 VFU_RS07390 32077fbcf293ea73bb5945b7016d3d79 399 Gene3D G3DSA:2.40.50.100 64 97 5.0E-20 T 21-04-2016 VFU_RS07390 32077fbcf293ea73bb5945b7016d3d79 399 Gene3D G3DSA:2.40.50.100 246 279 5.0E-20 T 21-04-2016 VFU_RS07390 32077fbcf293ea73bb5945b7016d3d79 399 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 182 319 6.1E-11 T 21-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VFU_RS07390 32077fbcf293ea73bb5945b7016d3d79 399 SUPERFAMILY SSF111369 141 201 3.79E-6 T 21-04-2016 VFU_RS07390 32077fbcf293ea73bb5945b7016d3d79 399 SUPERFAMILY SSF111369 199 298 3.27E-11 T 21-04-2016 VFU_RS07390 32077fbcf293ea73bb5945b7016d3d79 399 Pfam PF00529 HlyD membrane-fusion protein of T1SS 41 377 6.0E-15 T 21-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 VFU_RS13820 66dd23629277335208ed361474a2d4a2 183 SUPERFAMILY SSF110857 1 123 2.62E-20 T 21-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like VFU_RS13820 66dd23629277335208ed361474a2d4a2 183 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 110 1.3E-11 T 21-04-2016 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like VFU_RS13820 66dd23629277335208ed361474a2d4a2 183 Gene3D G3DSA:3.10.490.10 1 144 7.9E-12 T 21-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like VFU_RS09190 25560fea59513912c1b9d01ba535466b 219 SUPERFAMILY SSF89155 15 200 4.71E-52 T 21-04-2016 IPR020945 DMSO/Nitrate reductase chaperone VFU_RS09190 25560fea59513912c1b9d01ba535466b 219 PANTHER PTHR34227 18 208 3.4E-91 T 21-04-2016 VFU_RS09190 25560fea59513912c1b9d01ba535466b 219 Gene3D G3DSA:1.10.3480.10 12 200 8.0E-52 T 21-04-2016 IPR020945 DMSO/Nitrate reductase chaperone VFU_RS09190 25560fea59513912c1b9d01ba535466b 219 PANTHER PTHR34227:SF4 18 208 3.4E-91 T 21-04-2016 VFU_RS09190 25560fea59513912c1b9d01ba535466b 219 Pfam PF02613 Nitrate reductase delta subunit 52 165 3.4E-31 T 21-04-2016 IPR020945 DMSO/Nitrate reductase chaperone VFU_RS05325 4cfb491dd00ba5367f8e6b1d16b32f6c 1159 Gene3D G3DSA:3.20.20.140 5 257 1.7E-18 T 21-04-2016 VFU_RS05325 4cfb491dd00ba5367f8e6b1d16b32f6c 1159 PANTHER PTHR32294 2 1159 0.0 T 21-04-2016 VFU_RS05325 4cfb491dd00ba5367f8e6b1d16b32f6c 1159 Gene3D G3DSA:2.40.50.140 989 1076 5.6E-9 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS05325 4cfb491dd00ba5367f8e6b1d16b32f6c 1159 PANTHER PTHR32294:SF0 2 1159 0.0 T 21-04-2016 VFU_RS05325 4cfb491dd00ba5367f8e6b1d16b32f6c 1159 SUPERFAMILY SSF89550 5 263 1.53E-12 T 21-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 VFU_RS05325 4cfb491dd00ba5367f8e6b1d16b32f6c 1159 Pfam PF01336 OB-fold nucleic acid binding domain 999 1071 2.1E-10 T 21-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VFU_RS05325 4cfb491dd00ba5367f8e6b1d16b32f6c 1159 Pfam PF14579 Helix-hairpin-helix motif 808 897 1.6E-24 T 21-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS05325 4cfb491dd00ba5367f8e6b1d16b32f6c 1159 Pfam PF02811 PHP domain 8 172 9.7E-40 T 21-04-2016 IPR004013 PHP domain GO:0003824 VFU_RS05325 4cfb491dd00ba5367f8e6b1d16b32f6c 1159 SMART SM00481 7 74 1.6E-23 T 21-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 VFU_RS05325 4cfb491dd00ba5367f8e6b1d16b32f6c 1159 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 291 735 1.5E-176 T 21-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS05325 4cfb491dd00ba5367f8e6b1d16b32f6c 1159 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1030 0.0 T 21-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS05325 4cfb491dd00ba5367f8e6b1d16b32f6c 1159 Gene3D G3DSA:1.10.150.280 836 883 1.0E-5 T 21-04-2016 VFU_RS05820 618fa888bbe28d4f022185f36499cfaf 95 Pfam PF09904 Winged helix-turn helix 4 91 2.5E-37 T 21-04-2016 IPR017162 Uncharacterised conserved protein UCP037266 VFU_RS05820 618fa888bbe28d4f022185f36499cfaf 95 PIRSF PIRSF037266 1 94 6.4E-41 T 21-04-2016 IPR017162 Uncharacterised conserved protein UCP037266 VFU_RS04135 aaade5ea46735e9bf713069567ed2b17 443 Gene3D G3DSA:2.40.50.140 4 88 4.6E-30 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS04135 aaade5ea46735e9bf713069567ed2b17 443 Pfam PF01938 TRAM domain 17 68 2.5E-10 T 21-04-2016 IPR002792 TRAM domain VFU_RS04135 aaade5ea46735e9bf713069567ed2b17 443 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 424 434 - T 21-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site VFU_RS04135 aaade5ea46735e9bf713069567ed2b17 443 SUPERFAMILY SSF53335 77 441 7.71E-83 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS04135 aaade5ea46735e9bf713069567ed2b17 443 Gene3D G3DSA:3.40.50.150 260 440 3.4E-55 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS04135 aaade5ea46735e9bf713069567ed2b17 443 PANTHER PTHR11061 6 442 7.3E-124 T 21-04-2016 VFU_RS04135 aaade5ea46735e9bf713069567ed2b17 443 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 99 439 1.4E-28 T 21-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 VFU_RS04135 aaade5ea46735e9bf713069567ed2b17 443 SUPERFAMILY SSF50249 18 74 1.66E-14 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS04135 aaade5ea46735e9bf713069567ed2b17 443 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 25 434 1.1E-124 T 21-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 VFU_RS04135 aaade5ea46735e9bf713069567ed2b17 443 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 19 442 66.832 T 21-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 VFU_RS04135 aaade5ea46735e9bf713069567ed2b17 443 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 373 403 - T 21-04-2016 IPR030390 RNA methyltransferase TrmA, active site VFU_RS04135 aaade5ea46735e9bf713069567ed2b17 443 PANTHER PTHR11061:SF30 6 442 7.3E-124 T 21-04-2016 VFU_RS04025 2b15cb944d1bd4ff6041a71c0c3ef689 102 PANTHER PTHR34981:SF1 2 94 8.5E-25 T 21-04-2016 VFU_RS04025 2b15cb944d1bd4ff6041a71c0c3ef689 102 PANTHER PTHR34981 2 94 8.5E-25 T 21-04-2016 VFU_RS04025 2b15cb944d1bd4ff6041a71c0c3ef689 102 SUPERFAMILY SSF102829 6 95 2.62E-24 T 21-04-2016 IPR007838 Cell division protein ZapA-like VFU_RS04025 2b15cb944d1bd4ff6041a71c0c3ef689 102 Pfam PF05164 Cell division protein ZapA 6 89 1.8E-20 T 21-04-2016 IPR007838 Cell division protein ZapA-like VFU_RS02880 47748628277d5fe42e859278fe6eea86 803 Pfam PF00696 Amino acid kinase family 5 274 2.6E-42 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VFU_RS02880 47748628277d5fe42e859278fe6eea86 803 PIRSF PIRSF000727 5 803 7.0E-286 T 21-04-2016 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00050|UniPathway: UPA00051|UniPathway: UPA00051 VFU_RS02880 47748628277d5fe42e859278fe6eea86 803 PANTHER PTHR21499 378 800 2.6E-211 T 21-04-2016 VFU_RS02880 47748628277d5fe42e859278fe6eea86 803 SUPERFAMILY SSF53633 5 291 2.09E-56 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VFU_RS02880 47748628277d5fe42e859278fe6eea86 803 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 647 669 - T 21-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 VFU_RS02880 47748628277d5fe42e859278fe6eea86 803 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 8 445 1.1E-64 T 21-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VFU_RS02880 47748628277d5fe42e859278fe6eea86 803 Gene3D G3DSA:3.40.1160.10 4 52 3.1E-46 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VFU_RS02880 47748628277d5fe42e859278fe6eea86 803 Gene3D G3DSA:3.40.1160.10 106 291 3.1E-46 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VFU_RS02880 47748628277d5fe42e859278fe6eea86 803 PANTHER PTHR21499:SF29 378 800 2.6E-211 T 21-04-2016 VFU_RS02880 47748628277d5fe42e859278fe6eea86 803 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 457 593 1.0E-14 T 21-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 VFU_RS02880 47748628277d5fe42e859278fe6eea86 803 Gene3D G3DSA:3.40.50.720 448 622 8.5E-51 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS02880 47748628277d5fe42e859278fe6eea86 803 Pfam PF00742 Homoserine dehydrogenase 601 796 3.0E-43 T 21-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 VFU_RS02880 47748628277d5fe42e859278fe6eea86 803 SUPERFAMILY SSF55347 601 784 4.25E-46 T 21-04-2016 VFU_RS02880 47748628277d5fe42e859278fe6eea86 803 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 21-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VFU_RS02880 47748628277d5fe42e859278fe6eea86 803 Gene3D G3DSA:3.30.360.10 623 779 4.6E-51 T 21-04-2016 VFU_RS02880 47748628277d5fe42e859278fe6eea86 803 SUPERFAMILY SSF51735 448 623 8.95E-35 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS04390 0e69553304eb45442291c1e32cee3a0a 251 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 246 55.765 T 21-04-2016 IPR005224 Sugar fermentation stimulation protein VFU_RS04390 0e69553304eb45442291c1e32cee3a0a 251 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 1 233 7.3E-76 T 21-04-2016 IPR005224 Sugar fermentation stimulation protein VFU_RS04390 0e69553304eb45442291c1e32cee3a0a 251 Pfam PF03749 Sugar fermentation stimulation protein 13 237 2.2E-74 T 21-04-2016 IPR005224 Sugar fermentation stimulation protein VFU_RS04390 0e69553304eb45442291c1e32cee3a0a 251 PANTHER PTHR30545:SF2 1 243 1.1E-90 T 21-04-2016 VFU_RS04390 0e69553304eb45442291c1e32cee3a0a 251 PANTHER PTHR30545 1 243 1.1E-90 T 21-04-2016 VFU_RS14375 fbc9a8d8e32e1685254cade2f5b9a026 82 Gene3D G3DSA:3.30.1320.10 1 79 5.9E-32 T 21-04-2016 IPR023803 Ribosomal protein S16 domain VFU_RS14375 fbc9a8d8e32e1685254cade2f5b9a026 82 SUPERFAMILY SSF54565 1 76 1.7E-27 T 21-04-2016 IPR023803 Ribosomal protein S16 domain VFU_RS14375 fbc9a8d8e32e1685254cade2f5b9a026 82 PANTHER PTHR12919 1 78 1.8E-36 T 21-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS14375 fbc9a8d8e32e1685254cade2f5b9a026 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 1.2E-26 T 21-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS14375 fbc9a8d8e32e1685254cade2f5b9a026 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 22.711 T 21-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS14375 fbc9a8d8e32e1685254cade2f5b9a026 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 21-04-2016 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS14375 fbc9a8d8e32e1685254cade2f5b9a026 82 Pfam PF00886 Ribosomal protein S16 8 68 3.2E-23 T 21-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS01430 bd2a90a88f07a245ac7634f72720dc4e 192 Gene3D G3DSA:3.30.65.10 108 143 3.6E-7 T 21-04-2016 VFU_RS01430 bd2a90a88f07a245ac7634f72720dc4e 192 Gene3D G3DSA:3.30.65.10 65 101 1.3E-13 T 21-04-2016 VFU_RS01430 bd2a90a88f07a245ac7634f72720dc4e 192 Gene3D G3DSA:3.30.65.10 14 58 1.2E-14 T 21-04-2016 VFU_RS01430 bd2a90a88f07a245ac7634f72720dc4e 192 SUPERFAMILY SSF57783 9 62 2.72E-14 T 21-04-2016 VFU_RS01430 bd2a90a88f07a245ac7634f72720dc4e 192 PANTHER PTHR11390:SF26 4 188 1.2E-85 T 21-04-2016 VFU_RS01430 bd2a90a88f07a245ac7634f72720dc4e 192 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 18 55 3.5E-14 T 21-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 VFU_RS01430 bd2a90a88f07a245ac7634f72720dc4e 192 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 113 149 1.1E-11 T 21-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 VFU_RS01430 bd2a90a88f07a245ac7634f72720dc4e 192 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 65 99 1.8E-15 T 21-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 VFU_RS01430 bd2a90a88f07a245ac7634f72720dc4e 192 SUPERFAMILY SSF57783 64 104 1.43E-12 T 21-04-2016 VFU_RS01430 bd2a90a88f07a245ac7634f72720dc4e 192 PANTHER PTHR11390 4 188 1.2E-85 T 21-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VFU_RS03215 ee4c09adb5108b36c54ffdfd47b0b96f 325 SUPERFAMILY SSF53474 30 188 3.81E-40 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold VFU_RS03215 ee4c09adb5108b36c54ffdfd47b0b96f 325 SUPERFAMILY SSF53474 221 299 3.81E-40 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold VFU_RS03215 ee4c09adb5108b36c54ffdfd47b0b96f 325 PANTHER PTHR10794:SF46 1 325 7.4E-79 T 21-04-2016 VFU_RS03215 ee4c09adb5108b36c54ffdfd47b0b96f 325 PIRSF PIRSF005211 1 325 4.2E-105 T 21-04-2016 IPR012020 AB hydrolase 4 family KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- VFU_RS03215 ee4c09adb5108b36c54ffdfd47b0b96f 325 Pfam PF00561 alpha/beta hydrolase fold 61 301 9.8E-20 T 21-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VFU_RS03215 ee4c09adb5108b36c54ffdfd47b0b96f 325 PANTHER PTHR10794 1 325 7.4E-79 T 21-04-2016 VFU_RS03215 ee4c09adb5108b36c54ffdfd47b0b96f 325 Gene3D G3DSA:3.40.50.1820 53 300 2.3E-26 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold VFU_RS09010 0b40ef2fd35db3ea5c2a932b10f9e770 261 Pfam PF00753 Metallo-beta-lactamase superfamily 9 209 1.1E-21 T 21-04-2016 IPR001279 Metallo-beta-lactamase VFU_RS09010 0b40ef2fd35db3ea5c2a932b10f9e770 261 SMART SM00849 10 209 6.0E-22 T 21-04-2016 IPR001279 Metallo-beta-lactamase VFU_RS09010 0b40ef2fd35db3ea5c2a932b10f9e770 261 PANTHER PTHR11935 9 242 2.5E-17 T 21-04-2016 VFU_RS09010 0b40ef2fd35db3ea5c2a932b10f9e770 261 Gene3D G3DSA:3.60.15.10 5 242 1.8E-34 T 21-04-2016 IPR001279 Metallo-beta-lactamase VFU_RS09010 0b40ef2fd35db3ea5c2a932b10f9e770 261 SUPERFAMILY SSF56281 7 227 1.83E-38 T 21-04-2016 IPR001279 Metallo-beta-lactamase VFU_RS08355 a11e305949b9e5ecf788a09ede276c5b 92 PANTHER PTHR33284 1 92 2.0E-36 T 21-04-2016 VFU_RS08355 a11e305949b9e5ecf788a09ede276c5b 92 SUPERFAMILY SSF50715 1 92 1.66E-27 T 21-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 VFU_RS08355 a11e305949b9e5ecf788a09ede276c5b 92 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 1 92 26.103 T 21-04-2016 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 VFU_RS08355 a11e305949b9e5ecf788a09ede276c5b 92 Pfam PF01386 Ribosomal L25p family 4 89 9.8E-23 T 21-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 VFU_RS08355 a11e305949b9e5ecf788a09ede276c5b 92 Gene3D G3DSA:2.40.240.10 1 92 1.1E-30 T 21-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 VFU_RS08355 a11e305949b9e5ecf788a09ede276c5b 92 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 1 92 3.0E-45 T 21-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 VFU_RS02345 4046360cd2ab745b544be3b62d875172 88 PANTHER PTHR38775 2 88 2.1E-26 T 21-04-2016 VFU_RS02345 4046360cd2ab745b544be3b62d875172 88 Pfam PF06611 Protein of unknown function (DUF1145) 4 59 2.5E-17 T 21-04-2016 IPR009525 Protein of unknown function DUF1145 VFU_RS02345 4046360cd2ab745b544be3b62d875172 88 PANTHER PTHR38775:SF1 2 88 2.1E-26 T 21-04-2016 VFU_RS02605 8359d2d30656f054772a44f5353e9769 215 Pfam PF11612 Type II secretion system (T2SS), protein J 65 202 2.6E-38 T 21-04-2016 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 VFU_RS02605 8359d2d30656f054772a44f5353e9769 215 Gene3D G3DSA:3.10.610.10 44 157 2.5E-45 T 21-04-2016 VFU_RS02605 8359d2d30656f054772a44f5353e9769 215 Gene3D G3DSA:2.10.70.20 159 207 3.3E-22 T 21-04-2016 VFU_RS02605 8359d2d30656f054772a44f5353e9769 215 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 13 35 1.8E-9 T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site VFU_RS02605 8359d2d30656f054772a44f5353e9769 215 PANTHER PTHR39583:SF1 5 209 3.2E-55 T 21-04-2016 VFU_RS02605 8359d2d30656f054772a44f5353e9769 215 PANTHER PTHR39583 5 209 3.2E-55 T 21-04-2016 VFU_RS02605 8359d2d30656f054772a44f5353e9769 215 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 13 204 3.5E-84 T 21-04-2016 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 VFU_RS02605 8359d2d30656f054772a44f5353e9769 215 Pfam PF13633 Prokaryotic N-terminal methylation site 13 38 3.6E-12 T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site VFU_RS02605 8359d2d30656f054772a44f5353e9769 215 SUPERFAMILY SSF54523 48 209 4.76E-55 T 21-04-2016 VFU_RS02605 8359d2d30656f054772a44f5353e9769 215 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 13 33 - T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site VFU_RS03665 6f13e342f8373dd074448d36a480a760 219 PANTHER PTHR36573 2 219 3.3E-70 T 21-04-2016 VFU_RS03665 6f13e342f8373dd074448d36a480a760 219 Gene3D G3DSA:1.10.10.640 180 209 7.3E-9 T 21-04-2016 IPR023094 Toluene tolerance protein, alpha-helical VFU_RS03665 6f13e342f8373dd074448d36a480a760 219 Gene3D G3DSA:1.10.10.640 85 119 7.3E-9 T 21-04-2016 IPR023094 Toluene tolerance protein, alpha-helical VFU_RS03665 6f13e342f8373dd074448d36a480a760 219 PIRSF PIRSF004649 5 218 5.5E-57 T 21-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC VFU_RS03665 6f13e342f8373dd074448d36a480a760 219 Pfam PF05494 MlaC protein 40 205 4.5E-47 T 21-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC VFU_RS03665 6f13e342f8373dd074448d36a480a760 219 Gene3D G3DSA:3.10.450.50 122 179 1.1E-17 T 21-04-2016 IPR032710 NTF2-like domain VFU_RS03665 6f13e342f8373dd074448d36a480a760 219 Gene3D G3DSA:3.10.450.50 34 78 1.1E-17 T 21-04-2016 IPR032710 NTF2-like domain VFU_RS03790 6ebaba7b350ab8e10903f12f961bc507 74 Pfam PF09954 Uncharacterized protein conserved in bacteria (DUF2188) 4 63 1.6E-18 T 21-04-2016 IPR018691 Protein of unknown function DUF2188 VFU_RS08915 df3bd5571b564b00c160568f6a8ad0f6 486 Gene3D G3DSA:1.20.144.10 162 360 1.9E-9 T 21-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VFU_RS08915 df3bd5571b564b00c160568f6a8ad0f6 486 Pfam PF00293 NUDIX domain 34 125 8.5E-13 T 21-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 VFU_RS08915 df3bd5571b564b00c160568f6a8ad0f6 486 SUPERFAMILY SSF55811 35 159 1.76E-19 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VFU_RS08915 df3bd5571b564b00c160568f6a8ad0f6 486 Gene3D G3DSA:3.90.79.10 32 100 3.2E-17 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VFU_RS08915 df3bd5571b564b00c160568f6a8ad0f6 486 ProSitePatterns PS00893 Nudix box signature. 62 83 - T 21-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VFU_RS08915 df3bd5571b564b00c160568f6a8ad0f6 486 Pfam PF01569 PAP2 superfamily 247 360 5.0E-8 T 21-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VFU_RS08915 df3bd5571b564b00c160568f6a8ad0f6 486 SUPERFAMILY SSF48317 168 360 1.8E-8 T 21-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VFU_RS10870 7b88b5d0efe1b43be2d29637a397b61b 130 PIRSF PIRSF007010 1 130 7.8E-52 T 21-04-2016 IPR016502 Type II secretion system (T2SS) pilotin, S protein VFU_RS10870 7b88b5d0efe1b43be2d29637a397b61b 130 Pfam PF16549 Type II secretion system (T2SS) pilotin, S protein 15 130 3.9E-50 T 21-04-2016 IPR016502 Type II secretion system (T2SS) pilotin, S protein VFU_RS04380 1f3e40599775819a7e703a513e800187 296 PANTHER PTHR11451 1 221 6.8E-113 T 21-04-2016 VFU_RS04380 1f3e40599775819a7e703a513e800187 296 PANTHER PTHR11451:SF35 1 221 6.8E-113 T 21-04-2016 VFU_RS04380 1f3e40599775819a7e703a513e800187 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 168 178 8.8E-14 T 21-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VFU_RS04380 1f3e40599775819a7e703a513e800187 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 8.8E-14 T 21-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VFU_RS04380 1f3e40599775819a7e703a513e800187 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 8.8E-14 T 21-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VFU_RS04380 1f3e40599775819a7e703a513e800187 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 8.8E-14 T 21-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VFU_RS04380 1f3e40599775819a7e703a513e800187 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 184 192 8.8E-14 T 21-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VFU_RS04380 1f3e40599775819a7e703a513e800187 296 SUPERFAMILY SSF52374 3 281 1.16E-84 T 21-04-2016 VFU_RS04380 1f3e40599775819a7e703a513e800187 296 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 3 288 39.718 T 21-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 VFU_RS04380 1f3e40599775819a7e703a513e800187 296 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 3 268 8.1E-112 T 21-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 VFU_RS04380 1f3e40599775819a7e703a513e800187 296 Gene3D G3DSA:3.90.800.10 69 168 4.1E-18 T 21-04-2016 VFU_RS04380 1f3e40599775819a7e703a513e800187 296 Gene3D G3DSA:3.40.50.620 170 218 1.3E-37 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VFU_RS04380 1f3e40599775819a7e703a513e800187 296 Gene3D G3DSA:3.40.50.620 3 68 1.3E-37 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VFU_RS04380 1f3e40599775819a7e703a513e800187 296 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 6 107 1.1E-25 T 21-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 VFU_RS04380 1f3e40599775819a7e703a513e800187 296 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 124 235 1.5E-15 T 21-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 VFU_RS09690 78a656bf4595c8b579ac57d4147f6809 642 PANTHER PTHR37031:SF2 122 230 7.2E-93 T 21-04-2016 VFU_RS09690 78a656bf4595c8b579ac57d4147f6809 642 PANTHER PTHR37031 122 230 7.2E-93 T 21-04-2016 VFU_RS09690 78a656bf4595c8b579ac57d4147f6809 642 PANTHER PTHR37031:SF2 309 591 7.2E-93 T 21-04-2016 VFU_RS09690 78a656bf4595c8b579ac57d4147f6809 642 Gene3D G3DSA:3.60.21.10 149 167 3.3E-5 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like VFU_RS09690 78a656bf4595c8b579ac57d4147f6809 642 Gene3D G3DSA:3.60.21.10 285 355 3.3E-5 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like VFU_RS09690 78a656bf4595c8b579ac57d4147f6809 642 Gene3D G3DSA:3.60.21.10 405 437 3.3E-5 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like VFU_RS09690 78a656bf4595c8b579ac57d4147f6809 642 SUPERFAMILY SSF56300 152 185 8.35E-8 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like VFU_RS09690 78a656bf4595c8b579ac57d4147f6809 642 SUPERFAMILY SSF56300 313 355 8.35E-8 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like VFU_RS09690 78a656bf4595c8b579ac57d4147f6809 642 SUPERFAMILY SSF56300 403 530 8.35E-8 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like VFU_RS09690 78a656bf4595c8b579ac57d4147f6809 642 PANTHER PTHR37031 309 591 7.2E-93 T 21-04-2016 VFU_RS09690 78a656bf4595c8b579ac57d4147f6809 642 Pfam PF09423 PhoD-like phosphatase 310 577 5.5E-7 T 21-04-2016 IPR018946 Alkaline phosphatase D-related VFU_RS13170 a5b2bacf65249eeee722bf29c087bb5b 618 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 93 174 8.8E-20 T 21-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II VFU_RS13170 a5b2bacf65249eeee722bf29c087bb5b 618 PANTHER PTHR11938 93 498 7.2E-98 T 21-04-2016 VFU_RS13170 a5b2bacf65249eeee722bf29c087bb5b 618 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 190 487 1.8E-35 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS13170 a5b2bacf65249eeee722bf29c087bb5b 618 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 73 8.2E-7 T 21-04-2016 VFU_RS13170 a5b2bacf65249eeee722bf29c087bb5b 618 PANTHER PTHR11938:SF99 93 498 7.2E-98 T 21-04-2016 VFU_RS13170 a5b2bacf65249eeee722bf29c087bb5b 618 Gene3D G3DSA:3.50.50.60 286 422 2.4E-45 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS13170 a5b2bacf65249eeee722bf29c087bb5b 618 SUPERFAMILY SSF54292 1 96 6.58E-19 T 21-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VFU_RS13170 a5b2bacf65249eeee722bf29c087bb5b 618 SUPERFAMILY SSF46548 553 598 3.4E-7 T 21-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 VFU_RS13170 a5b2bacf65249eeee722bf29c087bb5b 618 SUPERFAMILY SSF46548 89 199 5.75E-17 T 21-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 VFU_RS13170 a5b2bacf65249eeee722bf29c087bb5b 618 SUPERFAMILY SSF51971 189 429 1.94E-61 T 21-04-2016 VFU_RS13170 a5b2bacf65249eeee722bf29c087bb5b 618 Gene3D G3DSA:3.50.50.60 423 513 2.2E-8 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS13170 a5b2bacf65249eeee722bf29c087bb5b 618 Gene3D G3DSA:1.10.1060.10 554 599 1.4E-11 T 21-04-2016 VFU_RS13170 a5b2bacf65249eeee722bf29c087bb5b 618 Gene3D G3DSA:1.10.1060.10 93 192 4.1E-25 T 21-04-2016 VFU_RS13170 a5b2bacf65249eeee722bf29c087bb5b 618 Gene3D G3DSA:3.40.50.720 193 285 1.3E-21 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS13170 a5b2bacf65249eeee722bf29c087bb5b 618 PRINTS PR00419 Adrenodoxin reductase family signature 322 336 1.8E-16 T 21-04-2016 VFU_RS13170 a5b2bacf65249eeee722bf29c087bb5b 618 PRINTS PR00419 Adrenodoxin reductase family signature 191 213 1.8E-16 T 21-04-2016 VFU_RS13170 a5b2bacf65249eeee722bf29c087bb5b 618 PRINTS PR00419 Adrenodoxin reductase family signature 214 227 1.8E-16 T 21-04-2016 VFU_RS15150 41dbff90e89fef361b4252826260042b 168 SUPERFAMILY SSF54523 11 81 1.57E-8 T 21-04-2016 VFU_RS15150 41dbff90e89fef361b4252826260042b 168 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 6 28 1.2E-6 T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site VFU_RS15150 41dbff90e89fef361b4252826260042b 168 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 30 4.2E-6 T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site VFU_RS00755 b1efbd6987540890825571ebc8b877a3 375 Pfam PF13439 Glycosyltransferase Family 4 19 190 9.8E-10 T 21-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain VFU_RS00755 b1efbd6987540890825571ebc8b877a3 375 SUPERFAMILY SSF53756 2 346 3.32E-53 T 21-04-2016 VFU_RS00755 b1efbd6987540890825571ebc8b877a3 375 PANTHER PTHR12526 148 345 2.9E-45 T 21-04-2016 VFU_RS00755 b1efbd6987540890825571ebc8b877a3 375 Gene3D G3DSA:3.40.50.2000 191 343 2.4E-19 T 21-04-2016 VFU_RS00755 b1efbd6987540890825571ebc8b877a3 375 Pfam PF00534 Glycosyl transferases group 1 203 344 6.0E-32 T 21-04-2016 IPR001296 Glycosyl transferase, family 1 VFU_RS00755 b1efbd6987540890825571ebc8b877a3 375 PANTHER PTHR12526:SF141 148 345 2.9E-45 T 21-04-2016 VFU_RS02935 5fed6d83103f6f5a68fdc1df244fb086 178 PANTHER PTHR33254:SF7 1 159 7.8E-106 T 21-04-2016 VFU_RS02935 5fed6d83103f6f5a68fdc1df244fb086 178 PANTHER PTHR33254 1 159 7.8E-106 T 21-04-2016 VFU_RS02935 5fed6d83103f6f5a68fdc1df244fb086 178 Gene3D G3DSA:3.50.30.40 1 157 4.0E-48 T 21-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VFU_RS02935 5fed6d83103f6f5a68fdc1df244fb086 178 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 1.2E-67 T 21-04-2016 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 VFU_RS02935 5fed6d83103f6f5a68fdc1df244fb086 178 Pfam PF03737 Demethylmenaquinone methyltransferase 6 152 6.6E-39 T 21-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VFU_RS02935 5fed6d83103f6f5a68fdc1df244fb086 178 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 47.222 T 21-04-2016 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 VFU_RS02935 5fed6d83103f6f5a68fdc1df244fb086 178 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 159 3.1E-82 T 21-04-2016 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 VFU_RS02935 5fed6d83103f6f5a68fdc1df244fb086 178 SUPERFAMILY SSF89562 2 158 4.84E-46 T 21-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VFU_RS10155 14f218350ef366dee2ed1722c245350b 406 Pfam PF07690 Major Facilitator Superfamily 16 352 6.6E-39 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VFU_RS10155 14f218350ef366dee2ed1722c245350b 406 PANTHER PTHR23501:SF11 1 393 1.2E-154 T 21-04-2016 VFU_RS10155 14f218350ef366dee2ed1722c245350b 406 Gene3D G3DSA:1.20.1250.20 212 389 4.1E-10 T 21-04-2016 VFU_RS10155 14f218350ef366dee2ed1722c245350b 406 Gene3D G3DSA:1.20.1250.20 11 187 9.8E-27 T 21-04-2016 VFU_RS10155 14f218350ef366dee2ed1722c245350b 406 SUPERFAMILY SSF103473 5 391 1.96E-53 T 21-04-2016 IPR020846 Major facilitator superfamily domain VFU_RS10155 14f218350ef366dee2ed1722c245350b 406 PANTHER PTHR23501 1 393 1.2E-154 T 21-04-2016 VFU_RS05300 e1ac7e71e529ce4cd752a356a2936594 344 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 110 145 2.8E-10 T 21-04-2016 IPR001451 Hexapeptide repeat VFU_RS05300 e1ac7e71e529ce4cd752a356a2936594 344 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 146 180 9.1E-8 T 21-04-2016 IPR001451 Hexapeptide repeat VFU_RS05300 e1ac7e71e529ce4cd752a356a2936594 344 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 330 1.4E-118 T 21-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 VFU_RS05300 e1ac7e71e529ce4cd752a356a2936594 344 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 23 88 6.0E-23 T 21-04-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 VFU_RS05300 e1ac7e71e529ce4cd752a356a2936594 344 Gene3D G3DSA:2.160.10.10 101 141 7.4E-12 T 21-04-2016 VFU_RS05300 e1ac7e71e529ce4cd752a356a2936594 344 Gene3D G3DSA:2.160.10.10 142 308 8.3E-39 T 21-04-2016 VFU_RS05300 e1ac7e71e529ce4cd752a356a2936594 344 PANTHER PTHR22572 101 296 3.0E-55 T 21-04-2016 VFU_RS05300 e1ac7e71e529ce4cd752a356a2936594 344 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 260 286 0.17 T 21-04-2016 IPR001451 Hexapeptide repeat VFU_RS05300 e1ac7e71e529ce4cd752a356a2936594 344 SUPERFAMILY SSF51161 32 317 4.5E-86 T 21-04-2016 IPR011004 Trimeric LpxA-like VFU_RS05300 e1ac7e71e529ce4cd752a356a2936594 344 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 5 327 35.303 T 21-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 VFU_RS05760 aaa8526de51aa957940ff8311b2e911e 486 PANTHER PTHR22726 1 351 1.8E-126 T 21-04-2016 VFU_RS05760 aaa8526de51aa957940ff8311b2e911e 486 Gene3D G3DSA:1.25.40.10 312 459 2.8E-19 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VFU_RS05760 aaa8526de51aa957940ff8311b2e911e 486 PANTHER PTHR22726:SF10 1 351 1.8E-126 T 21-04-2016 VFU_RS05760 aaa8526de51aa957940ff8311b2e911e 486 Pfam PF14559 Tetratricopeptide repeat 354 417 1.6E-9 T 21-04-2016 VFU_RS05760 aaa8526de51aa957940ff8311b2e911e 486 Pfam PF01435 Peptidase family M48 72 254 5.7E-28 T 21-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 VFU_RS05760 aaa8526de51aa957940ff8311b2e911e 486 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 7 483 32.17 T 21-04-2016 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 VFU_RS05760 aaa8526de51aa957940ff8311b2e911e 486 SUPERFAMILY SSF48452 312 457 1.49E-17 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VFU_RS05760 aaa8526de51aa957940ff8311b2e911e 486 Gene3D G3DSA:3.30.2010.10 66 149 2.5E-18 T 21-04-2016 VFU_RS12390 43ccc13764d2ef6140e0f96f7dac9fc2 435 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 1 435 66.177 T 21-04-2016 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0005737|GO:0006631|GO:0016042|GO:0016740|GO:0016746 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 VFU_RS12390 43ccc13764d2ef6140e0f96f7dac9fc2 435 Gene3D G3DSA:3.40.47.10 174 219 3.1E-46 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VFU_RS12390 43ccc13764d2ef6140e0f96f7dac9fc2 435 Gene3D G3DSA:3.40.47.10 303 435 3.1E-46 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VFU_RS12390 43ccc13764d2ef6140e0f96f7dac9fc2 435 Pfam PF02803 Thiolase, C-terminal domain 295 433 5.8E-35 T 21-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 VFU_RS12390 43ccc13764d2ef6140e0f96f7dac9fc2 435 PANTHER PTHR18919:SF5 9 435 3.4E-190 T 21-04-2016 VFU_RS12390 43ccc13764d2ef6140e0f96f7dac9fc2 435 SUPERFAMILY SSF53901 14 294 5.26E-60 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VFU_RS12390 43ccc13764d2ef6140e0f96f7dac9fc2 435 Gene3D G3DSA:3.40.47.10 14 133 4.4E-52 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VFU_RS12390 43ccc13764d2ef6140e0f96f7dac9fc2 435 Gene3D G3DSA:3.40.47.10 220 299 4.4E-52 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VFU_RS12390 43ccc13764d2ef6140e0f96f7dac9fc2 435 Pfam PF00108 Thiolase, N-terminal domain 14 286 4.7E-63 T 21-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 VFU_RS12390 43ccc13764d2ef6140e0f96f7dac9fc2 435 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 6 435 3.8E-264 T 21-04-2016 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0005737|GO:0006631|GO:0016042|GO:0016740|GO:0016746 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 VFU_RS12390 43ccc13764d2ef6140e0f96f7dac9fc2 435 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 16 433 7.4E-126 T 21-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 VFU_RS12390 43ccc13764d2ef6140e0f96f7dac9fc2 435 SUPERFAMILY SSF53901 296 434 4.04E-31 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VFU_RS12390 43ccc13764d2ef6140e0f96f7dac9fc2 435 ProSitePatterns PS00737 Thiolases signature 2. 381 397 - T 21-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 VFU_RS12390 43ccc13764d2ef6140e0f96f7dac9fc2 435 PANTHER PTHR18919 9 435 3.4E-190 T 21-04-2016 VFU_RS12390 43ccc13764d2ef6140e0f96f7dac9fc2 435 PIRSF PIRSF000429 8 435 1.5E-118 T 21-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 VFU_RS13830 c4948c8039c9e9f36266049fee286a2d 364 PANTHER PTHR10091 2 360 1.9E-129 T 21-04-2016 VFU_RS13830 c4948c8039c9e9f36266049fee286a2d 364 Pfam PF01263 Aldose 1-epimerase 30 356 1.0E-85 T 21-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 VFU_RS13830 c4948c8039c9e9f36266049fee286a2d 364 Gene3D G3DSA:2.70.98.10 24 360 1.1E-116 T 21-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 VFU_RS13830 c4948c8039c9e9f36266049fee286a2d 364 TIGRFAM TIGR02636 galM_Leloir: galactose mutarotase 26 358 3.6E-139 T 21-04-2016 IPR013458 Aldose 1-epimerase, bacterial GO:0004034|GO:0006012 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 VFU_RS13830 c4948c8039c9e9f36266049fee286a2d 364 SUPERFAMILY SSF74650 17 357 2.83E-106 T 21-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 VFU_RS13830 c4948c8039c9e9f36266049fee286a2d 364 PANTHER PTHR10091:SF0 2 360 1.9E-129 T 21-04-2016 VFU_RS13830 c4948c8039c9e9f36266049fee286a2d 364 PIRSF PIRSF005096 14 360 1.9E-115 T 21-04-2016 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 VFU_RS13830 c4948c8039c9e9f36266049fee286a2d 364 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 183 192 - T 21-04-2016 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 VFU_RS09820 0841d0af1242f476a68ab2c6f2a0dc77 220 ProSitePatterns PS01243 Bax inhibitor-1 family signature. 88 118 - T 21-04-2016 IPR006213 Bax inhibitor 1, conserved site GO:0016021|GO:0043066 VFU_RS09820 0841d0af1242f476a68ab2c6f2a0dc77 220 PANTHER PTHR23291:SF37 1 220 4.4E-95 T 21-04-2016 VFU_RS09820 0841d0af1242f476a68ab2c6f2a0dc77 220 PANTHER PTHR23291 1 220 4.4E-95 T 21-04-2016 IPR006214 Bax inhibitor 1-related VFU_RS09820 0841d0af1242f476a68ab2c6f2a0dc77 220 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 214 1.2E-42 T 21-04-2016 VFU_RS10225 d72925aaa1211f86cb6441306214347e 76 Pfam PF09016 Pas factor saposin fold 1 76 5.2E-43 T 21-04-2016 IPR015106 Pas factor saposin domain VFU_RS04880 1af3c7c7ddfa54f54dee3463e43b735f 125 Pfam PF07238 PilZ domain 3 100 2.1E-11 T 21-04-2016 IPR009875 PilZ domain GO:0035438 VFU_RS04880 1af3c7c7ddfa54f54dee3463e43b735f 125 PIRSF PIRSF028141 1 120 4.6E-38 T 21-04-2016 IPR027021 Cyclic di-GMP binding protein, PA4608 type VFU_RS04880 1af3c7c7ddfa54f54dee3463e43b735f 125 SUPERFAMILY SSF141371 1 120 6.67E-31 T 21-04-2016 VFU_RS04880 1af3c7c7ddfa54f54dee3463e43b735f 125 Gene3D G3DSA:2.40.10.220 1 122 3.6E-42 T 21-04-2016 VFU_RS13605 9760c16301d4131d0914bb732e717abd 545 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 35 544 1.4E-264 T 21-04-2016 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 VFU_RS13605 9760c16301d4131d0914bb732e717abd 545 SUPERFAMILY SSF51645 19 544 1.15E-188 T 21-04-2016 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 VFU_RS13605 9760c16301d4131d0914bb732e717abd 545 Pfam PF01274 Malate synthase 25 544 6.3E-197 T 21-04-2016 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 VFU_RS13605 9760c16301d4131d0914bb732e717abd 545 PANTHER PTHR21631:SF1 7 544 3.8E-274 T 21-04-2016 VFU_RS13605 9760c16301d4131d0914bb732e717abd 545 PIRSF PIRSF001363 14 545 1.7E-250 T 21-04-2016 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 VFU_RS13605 9760c16301d4131d0914bb732e717abd 545 ProSitePatterns PS00510 Malate synthase signature. 278 293 - T 21-04-2016 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 VFU_RS13605 9760c16301d4131d0914bb732e717abd 545 Gene3D G3DSA:1.20.1220.12 427 538 1.0E-36 T 21-04-2016 VFU_RS13605 9760c16301d4131d0914bb732e717abd 545 Gene3D G3DSA:3.20.20.360 84 426 9.0E-116 T 21-04-2016 VFU_RS13605 9760c16301d4131d0914bb732e717abd 545 PANTHER PTHR21631 7 544 3.8E-274 T 21-04-2016 VFU_RS08020 269ee068f27563e4e8d82b153ee906ce 323 Gene3D G3DSA:3.40.50.150 111 322 8.4E-28 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS08020 269ee068f27563e4e8d82b153ee906ce 323 SUPERFAMILY SSF53335 91 323 2.3E-37 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS08020 269ee068f27563e4e8d82b153ee906ce 323 PANTHER PTHR10108 38 322 2.0E-137 T 21-04-2016 VFU_RS08020 269ee068f27563e4e8d82b153ee906ce 323 Hamap MF_01590 tRNA (mo5U34)-methyltransferase [cmoB]. 13 322 54.834 T 21-04-2016 IPR010017 tRNA (mo5U34)-methyltransferase GO:0002098|GO:0016300 VFU_RS08020 269ee068f27563e4e8d82b153ee906ce 323 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 13 321 1.1E-147 T 21-04-2016 IPR010017 tRNA (mo5U34)-methyltransferase GO:0002098|GO:0016300 VFU_RS08020 269ee068f27563e4e8d82b153ee906ce 323 PANTHER PTHR10108:SF847 38 322 2.0E-137 T 21-04-2016 VFU_RS08020 269ee068f27563e4e8d82b153ee906ce 323 Pfam PF08003 Protein of unknown function (DUF1698) 8 322 3.1E-169 T 21-04-2016 IPR027555 tRNA (mo5U34)-methyltransferase-like VFU_RS14290 0256c55e943819f27804acab08e74afe 196 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 34.658 T 21-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 VFU_RS14290 0256c55e943819f27804acab08e74afe 196 SUPERFAMILY SSF53697 1 191 2.0E-56 T 21-04-2016 VFU_RS14290 0256c55e943819f27804acab08e74afe 196 PANTHER PTHR30390:SF5 1 196 4.2E-117 T 21-04-2016 VFU_RS14290 0256c55e943819f27804acab08e74afe 196 Gene3D G3DSA:3.40.50.10490 2 191 3.5E-58 T 21-04-2016 VFU_RS14290 0256c55e943819f27804acab08e74afe 196 Pfam PF13580 SIS domain 9 144 2.4E-33 T 21-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 VFU_RS14290 0256c55e943819f27804acab08e74afe 196 PANTHER PTHR30390 1 196 4.2E-117 T 21-04-2016 VFU_RS03555 86879d5a6b0f675f27b4a989f7d10bfa 456 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 8.1E-263 T 21-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 VFU_RS03555 86879d5a6b0f675f27b4a989f7d10bfa 456 Pfam PF08245 Mur ligase middle domain 108 291 2.4E-21 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VFU_RS03555 86879d5a6b0f675f27b4a989f7d10bfa 456 PANTHER PTHR23135:SF17 1 439 1.8E-295 T 21-04-2016 VFU_RS03555 86879d5a6b0f675f27b4a989f7d10bfa 456 Gene3D G3DSA:3.40.50.720 1 90 1.6E-39 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS03555 86879d5a6b0f675f27b4a989f7d10bfa 456 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 384 3.1E-12 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VFU_RS03555 86879d5a6b0f675f27b4a989f7d10bfa 456 Gene3D G3DSA:3.90.190.20 313 449 4.6E-36 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VFU_RS03555 86879d5a6b0f675f27b4a989f7d10bfa 456 PANTHER PTHR23135 1 439 1.8E-295 T 21-04-2016 VFU_RS03555 86879d5a6b0f675f27b4a989f7d10bfa 456 SUPERFAMILY SSF51984 1 89 6.15E-23 T 21-04-2016 VFU_RS03555 86879d5a6b0f675f27b4a989f7d10bfa 456 Gene3D G3DSA:3.40.1190.10 92 312 9.5E-88 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VFU_RS03555 86879d5a6b0f675f27b4a989f7d10bfa 456 SUPERFAMILY SSF53623 95 308 3.27E-52 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VFU_RS03555 86879d5a6b0f675f27b4a989f7d10bfa 456 Pfam PF01225 Mur ligase family, catalytic domain 2 99 2.8E-18 T 21-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 VFU_RS03555 86879d5a6b0f675f27b4a989f7d10bfa 456 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 449 59.052 T 21-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 VFU_RS03555 86879d5a6b0f675f27b4a989f7d10bfa 456 SUPERFAMILY SSF53244 311 448 3.14E-38 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VFU_RS05670 d091d2b2020cb705661fb601cfaca49b 363 Gene3D G3DSA:3.40.50.300 4 131 9.9E-45 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS05670 d091d2b2020cb705661fb601cfaca49b 363 Gene3D G3DSA:3.40.50.300 201 267 9.9E-45 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS05670 d091d2b2020cb705661fb601cfaca49b 363 SUPERFAMILY SSF81271 279 360 6.54E-37 T 21-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VFU_RS05670 d091d2b2020cb705661fb601cfaca49b 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 1.3E-39 T 21-04-2016 IPR013029 Domain of unknown function DUF933 VFU_RS05670 d091d2b2020cb705661fb601cfaca49b 363 Gene3D G3DSA:1.10.150.300 132 200 3.5E-26 T 21-04-2016 IPR023192 TGS-like domain VFU_RS05670 d091d2b2020cb705661fb601cfaca49b 363 PIRSF PIRSF006641 1 363 4.4E-157 T 21-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 VFU_RS05670 d091d2b2020cb705661fb601cfaca49b 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 45.153 T 21-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 VFU_RS05670 d091d2b2020cb705661fb601cfaca49b 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.9E-34 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 VFU_RS05670 d091d2b2020cb705661fb601cfaca49b 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.9E-34 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 VFU_RS05670 d091d2b2020cb705661fb601cfaca49b 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.9E-34 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 VFU_RS05670 d091d2b2020cb705661fb601cfaca49b 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.9E-34 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 VFU_RS05670 d091d2b2020cb705661fb601cfaca49b 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 3.3E-168 T 21-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 VFU_RS05670 d091d2b2020cb705661fb601cfaca49b 363 Gene3D G3DSA:3.10.20.30 268 363 5.5E-50 T 21-04-2016 IPR012675 Beta-grasp domain VFU_RS05670 d091d2b2020cb705661fb601cfaca49b 363 PANTHER PTHR23305 1 363 1.0E-212 T 21-04-2016 VFU_RS05670 d091d2b2020cb705661fb601cfaca49b 363 SUPERFAMILY SSF52540 3 301 1.81E-83 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS05670 d091d2b2020cb705661fb601cfaca49b 363 Pfam PF01926 50S ribosome-binding GTPase 5 121 1.2E-21 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 VFU_RS12865 1e217dd5e16875b97f945096fabf719c 627 Pfam PF00905 Penicillin binding protein transpeptidase domain 272 616 1.1E-74 T 21-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VFU_RS12865 1e217dd5e16875b97f945096fabf719c 627 PANTHER PTHR30627:SF2 6 626 3.9E-268 T 21-04-2016 VFU_RS12865 1e217dd5e16875b97f945096fabf719c 627 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 21 619 2.9E-240 T 21-04-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 VFU_RS12865 1e217dd5e16875b97f945096fabf719c 627 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 240 3.5E-50 T 21-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 VFU_RS12865 1e217dd5e16875b97f945096fabf719c 627 PANTHER PTHR30627 6 626 3.9E-268 T 21-04-2016 VFU_RS12865 1e217dd5e16875b97f945096fabf719c 627 Gene3D G3DSA:3.40.710.10 255 623 1.1E-104 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VFU_RS12865 1e217dd5e16875b97f945096fabf719c 627 SUPERFAMILY SSF56601 255 619 6.99E-97 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VFU_RS12865 1e217dd5e16875b97f945096fabf719c 627 Gene3D G3DSA:3.90.1310.10 132 253 1.8E-39 T 21-04-2016 VFU_RS12865 1e217dd5e16875b97f945096fabf719c 627 SUPERFAMILY SSF56519 57 253 1.01E-55 T 21-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 VFU_RS05690 5994dfa82ca4df36f5e13f98fdfbfd4d 204 PANTHER PTHR30634:SF11 1 202 6.9E-37 T 21-04-2016 VFU_RS05690 5994dfa82ca4df36f5e13f98fdfbfd4d 204 PANTHER PTHR30634 1 202 6.9E-37 T 21-04-2016 VFU_RS05690 5994dfa82ca4df36f5e13f98fdfbfd4d 204 Pfam PF03550 Outer membrane lipoprotein LolB 44 200 2.0E-45 T 21-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 VFU_RS05690 5994dfa82ca4df36f5e13f98fdfbfd4d 204 Gene3D G3DSA:2.50.20.10 13 202 6.0E-61 T 21-04-2016 VFU_RS05690 5994dfa82ca4df36f5e13f98fdfbfd4d 204 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 3 202 26.369 T 21-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 VFU_RS05690 5994dfa82ca4df36f5e13f98fdfbfd4d 204 SUPERFAMILY SSF89392 19 202 7.85E-49 T 21-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX VFU_RS05690 5994dfa82ca4df36f5e13f98fdfbfd4d 204 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 28 201 9.6E-40 T 21-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 VFU_RS12395 e5d9887ae7f784fbd34d44e877f33b30 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 175 6.8E-25 T 21-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS12395 e5d9887ae7f784fbd34d44e877f33b30 187 Gene3D G3DSA:1.10.1740.10 23 116 1.9E-22 T 21-04-2016 VFU_RS12395 e5d9887ae7f784fbd34d44e877f33b30 187 SUPERFAMILY SSF88659 115 176 4.3E-13 T 21-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS12395 e5d9887ae7f784fbd34d44e877f33b30 187 PANTHER PTHR30173 1 182 1.2E-55 T 21-04-2016 VFU_RS12395 e5d9887ae7f784fbd34d44e877f33b30 187 Pfam PF08281 Sigma-70, region 4 119 171 9.7E-12 T 21-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS12395 e5d9887ae7f784fbd34d44e877f33b30 187 Gene3D G3DSA:1.10.10.10 117 176 6.2E-19 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS12395 e5d9887ae7f784fbd34d44e877f33b30 187 PANTHER PTHR30173:SF6 1 182 1.2E-55 T 21-04-2016 VFU_RS12395 e5d9887ae7f784fbd34d44e877f33b30 187 Pfam PF04542 Sigma-70 region 2 29 95 1.1E-16 T 21-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS12395 e5d9887ae7f784fbd34d44e877f33b30 187 SUPERFAMILY SSF88946 23 111 1.02E-20 T 21-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS12395 e5d9887ae7f784fbd34d44e877f33b30 187 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 51 82 - T 21-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS08780 3f2156b31b7987b264eba93c045224e2 157 Gene3D G3DSA:3.40.50.2300 4 136 5.3E-21 T 21-04-2016 VFU_RS08780 3f2156b31b7987b264eba93c045224e2 157 SUPERFAMILY SSF52172 1 132 4.13E-20 T 21-04-2016 IPR011006 CheY-like superfamily VFU_RS08780 3f2156b31b7987b264eba93c045224e2 157 PANTHER PTHR26402:SF515 4 134 5.0E-56 T 21-04-2016 VFU_RS08780 3f2156b31b7987b264eba93c045224e2 157 SMART SM00448 4 125 4.8E-12 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS08780 3f2156b31b7987b264eba93c045224e2 157 PANTHER PTHR26402 4 134 5.0E-56 T 21-04-2016 VFU_RS08780 3f2156b31b7987b264eba93c045224e2 157 Pfam PF00072 Response regulator receiver domain 6 125 9.1E-14 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS10920 4cb89a4d1813a8d5244146fd253ceb43 129 SUPERFAMILY SSF101116 10 128 7.98E-26 T 21-04-2016 IPR003713 Flagellar protein FliS GO:0044780 VFU_RS10920 4cb89a4d1813a8d5244146fd253ceb43 129 TIGRFAM TIGR00208 fliS: flagellar protein FliS 9 126 1.5E-15 T 21-04-2016 IPR003713 Flagellar protein FliS GO:0044780 VFU_RS10920 4cb89a4d1813a8d5244146fd253ceb43 129 Gene3D G3DSA:1.20.120.340 9 128 2.7E-23 T 21-04-2016 IPR003713 Flagellar protein FliS GO:0044780 VFU_RS10920 4cb89a4d1813a8d5244146fd253ceb43 129 Pfam PF02561 Flagellar protein FliS 11 125 4.3E-21 T 21-04-2016 IPR003713 Flagellar protein FliS GO:0044780 VFU_RS10920 4cb89a4d1813a8d5244146fd253ceb43 129 PANTHER PTHR34773 1 129 4.2E-16 T 21-04-2016 VFU_RS08130 93172bf17dafebd8ac1384344c0fc29a 329 PANTHER PTHR24220 5 328 6.4E-207 T 21-04-2016 VFU_RS08130 93172bf17dafebd8ac1384344c0fc29a 329 Gene3D G3DSA:3.40.50.300 2 262 1.1E-55 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS08130 93172bf17dafebd8ac1384344c0fc29a 329 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 2.1E-15 T 21-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VFU_RS08130 93172bf17dafebd8ac1384344c0fc29a 329 SUPERFAMILY SSF52540 3 268 1.07E-48 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS08130 93172bf17dafebd8ac1384344c0fc29a 329 Pfam PF00005 ABC transporter 24 187 6.9E-26 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS08130 93172bf17dafebd8ac1384344c0fc29a 329 PANTHER PTHR24220:SF514 5 328 6.4E-207 T 21-04-2016 VFU_RS08130 93172bf17dafebd8ac1384344c0fc29a 329 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 1.7E-20 T 21-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VFU_RS15580 a9c1a694a4ca6a8f78ab2ff63dbf8f17 274 PANTHER PTHR19376 2 274 4.5E-171 T 21-04-2016 VFU_RS15580 a9c1a694a4ca6a8f78ab2ff63dbf8f17 274 SUPERFAMILY SSF64484 7 274 2.98E-136 T 21-04-2016 VFU_RS15580 a9c1a694a4ca6a8f78ab2ff63dbf8f17 274 Gene3D G3DSA:2.40.40.20 222 274 2.2E-31 T 21-04-2016 VFU_RS15580 a9c1a694a4ca6a8f78ab2ff63dbf8f17 274 Gene3D G3DSA:2.40.40.20 154 181 2.2E-31 T 21-04-2016 VFU_RS15580 a9c1a694a4ca6a8f78ab2ff63dbf8f17 274 SMART SM00663 40 274 3.3E-131 T 21-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VFU_RS15580 a9c1a694a4ca6a8f78ab2ff63dbf8f17 274 Pfam PF00623 RNA polymerase Rpb1, domain 2 149 201 5.1E-9 T 21-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VFU_RS15580 a9c1a694a4ca6a8f78ab2ff63dbf8f17 274 Pfam PF00623 RNA polymerase Rpb1, domain 2 194 274 1.7E-22 T 21-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VFU_RS15580 a9c1a694a4ca6a8f78ab2ff63dbf8f17 274 PANTHER PTHR19376:SF32 2 274 4.5E-171 T 21-04-2016 VFU_RS15580 a9c1a694a4ca6a8f78ab2ff63dbf8f17 274 Pfam PF04997 RNA polymerase Rpb1, domain 1 7 147 6.8E-51 T 21-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VFU_RS15350 688cadb6ccd080c5c32d4c163ef82afe 469 Gene3D G3DSA:3.40.50.300 198 461 4.1E-105 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS15350 688cadb6ccd080c5c32d4c163ef82afe 469 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 24 461 2.8E-174 T 21-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 VFU_RS15350 688cadb6ccd080c5c32d4c163ef82afe 469 SUPERFAMILY SSF48024 22 133 4.58E-37 T 21-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 VFU_RS15350 688cadb6ccd080c5c32d4c163ef82afe 469 PANTHER PTHR30153 8 469 7.6E-224 T 21-04-2016 VFU_RS15350 688cadb6ccd080c5c32d4c163ef82afe 469 Pfam PF00772 DnaB-like helicase N terminal domain 24 125 1.6E-34 T 21-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 VFU_RS15350 688cadb6ccd080c5c32d4c163ef82afe 469 SUPERFAMILY SSF52540 201 272 1.67E-51 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS15350 688cadb6ccd080c5c32d4c163ef82afe 469 SUPERFAMILY SSF52540 299 452 1.67E-51 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS15350 688cadb6ccd080c5c32d4c163ef82afe 469 Pfam PF03796 DnaB-like helicase C terminal domain 203 459 4.3E-115 T 21-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 VFU_RS15350 688cadb6ccd080c5c32d4c163ef82afe 469 Gene3D G3DSA:1.10.860.10 24 126 3.4E-37 T 21-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal VFU_RS07200 aecfb7ca1fc13a5ee14db1ff09592a91 454 PANTHER PTHR30365 1 449 1.4E-270 T 21-04-2016 VFU_RS07200 aecfb7ca1fc13a5ee14db1ff09592a91 454 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 437 1.2E-163 T 21-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 VFU_RS07200 aecfb7ca1fc13a5ee14db1ff09592a91 454 PANTHER PTHR30365:SF8 1 449 1.4E-270 T 21-04-2016 VFU_RS07200 aecfb7ca1fc13a5ee14db1ff09592a91 454 PIRSF PIRSF006446 2 451 1.7E-213 T 21-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 VFU_RS10925 c0ef412c72573d1137b786b3c64ad063 440 PANTHER PTHR30288 3 440 2.1E-39 T 21-04-2016 VFU_RS10925 c0ef412c72573d1137b786b3c64ad063 440 PANTHER PTHR30288:SF0 3 440 2.1E-39 T 21-04-2016 VFU_RS10925 c0ef412c72573d1137b786b3c64ad063 440 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 3 99 3.1E-10 T 21-04-2016 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 VFU_RS10925 c0ef412c72573d1137b786b3c64ad063 440 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 214 434 5.1E-39 T 21-04-2016 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 VFU_RS08045 728f30be21c46ce5d663bec0cd975ceb 210 Gene3D G3DSA:3.40.50.620 16 151 1.4E-49 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VFU_RS08045 728f30be21c46ce5d663bec0cd975ceb 210 PANTHER PTHR30336 1 205 7.9E-79 T 21-04-2016 VFU_RS08045 728f30be21c46ce5d663bec0cd975ceb 210 PANTHER PTHR30336:SF5 1 205 7.9E-79 T 21-04-2016 VFU_RS08045 728f30be21c46ce5d663bec0cd975ceb 210 Pfam PF02698 DUF218 domain 26 141 2.3E-21 T 21-04-2016 IPR003848 Domain of unknown function DUF218 VFU_RS06330 0ff1788538d3b38719e00e6e606bbcd5 222 Gene3D G3DSA:3.40.50.720 3 203 2.6E-25 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS06330 0ff1788538d3b38719e00e6e606bbcd5 222 SUPERFAMILY SSF51735 3 204 7.46E-26 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS06330 0ff1788538d3b38719e00e6e606bbcd5 222 Pfam PF00106 short chain dehydrogenase 8 185 8.5E-18 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS13450 867a7b27b94e0018739cdeb13ee4f21f 461 Pfam PF13742 OB-fold nucleic acid binding domain 28 121 4.4E-29 T 21-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 VFU_RS13450 867a7b27b94e0018739cdeb13ee4f21f 461 PANTHER PTHR30008 20 461 2.1E-183 T 21-04-2016 VFU_RS13450 867a7b27b94e0018739cdeb13ee4f21f 461 PANTHER PTHR30008:SF0 20 461 2.1E-183 T 21-04-2016 VFU_RS13450 867a7b27b94e0018739cdeb13ee4f21f 461 Pfam PF02601 Exonuclease VII, large subunit 144 458 3.4E-104 T 21-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 VFU_RS13450 867a7b27b94e0018739cdeb13ee4f21f 461 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 25 461 31.117 T 21-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 VFU_RS13450 867a7b27b94e0018739cdeb13ee4f21f 461 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 29 378 5.7E-137 T 21-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 VFU_RS03345 e56bff11fae395313b5a5f96ea4e416d 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 21-04-2016 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 VFU_RS03345 e56bff11fae395313b5a5f96ea4e416d 101 Pfam PF00253 Ribosomal protein S14p/S29e 48 100 1.2E-24 T 21-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS03345 e56bff11fae395313b5a5f96ea4e416d 101 PANTHER PTHR19836 1 101 6.6E-58 T 21-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS03345 e56bff11fae395313b5a5f96ea4e416d 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.761 T 21-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid VFU_RS03345 e56bff11fae395313b5a5f96ea4e416d 101 Gene3D G3DSA:4.10.830.10 41 101 1.1E-29 T 21-04-2016 VFU_RS03345 e56bff11fae395313b5a5f96ea4e416d 101 SUPERFAMILY SSF57716 2 101 2.0E-36 T 21-04-2016 VFU_RS01760 7878bddd878f7dd8f70adfea832e9693 293 Pfam PF02195 ParB-like nuclease domain 44 130 3.9E-28 T 21-04-2016 IPR003115 ParB/Sulfiredoxin VFU_RS01760 7878bddd878f7dd8f70adfea832e9693 293 Gene3D G3DSA:1.10.10.10 145 174 9.5E-4 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS01760 7878bddd878f7dd8f70adfea832e9693 293 SUPERFAMILY SSF110849 44 132 5.75E-28 T 21-04-2016 IPR003115 ParB/Sulfiredoxin VFU_RS01760 7878bddd878f7dd8f70adfea832e9693 293 PANTHER PTHR33375 1 291 3.2E-93 T 21-04-2016 VFU_RS01760 7878bddd878f7dd8f70adfea832e9693 293 SUPERFAMILY SSF109709 122 230 8.89E-34 T 21-04-2016 VFU_RS01760 7878bddd878f7dd8f70adfea832e9693 293 PANTHER PTHR33375:SF1 1 291 3.2E-93 T 21-04-2016 VFU_RS01760 7878bddd878f7dd8f70adfea832e9693 293 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 38 214 5.2E-57 T 21-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 VFU_RS01760 7878bddd878f7dd8f70adfea832e9693 293 SMART SM00470 40 130 4.4E-36 T 21-04-2016 IPR003115 ParB/Sulfiredoxin VFU_RS01760 7878bddd878f7dd8f70adfea832e9693 293 Gene3D G3DSA:3.90.1530.10 34 136 2.2E-39 T 21-04-2016 VFU_RS11580 71f97ed0683ddcb551025a02ff535162 59 PANTHER PTHR33505 1 57 1.9E-26 T 21-04-2016 VFU_RS11580 71f97ed0683ddcb551025a02ff535162 59 Gene3D G3DSA:2.20.25.10 8 57 1.4E-25 T 21-04-2016 VFU_RS11580 71f97ed0683ddcb551025a02ff535162 59 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 27.867 T 21-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 VFU_RS11580 71f97ed0683ddcb551025a02ff535162 59 Pfam PF03966 Trm112p-like protein 2 41 2.0E-11 T 21-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 VFU_RS11580 71f97ed0683ddcb551025a02ff535162 59 SUPERFAMILY SSF158997 1 54 7.72E-21 T 21-04-2016 VFU_RS13510 bd9747b30d146df5ca3ef12a859efc08 64 PANTHER PTHR37532:SF1 1 64 9.1E-31 T 21-04-2016 VFU_RS13510 bd9747b30d146df5ca3ef12a859efc08 64 PANTHER PTHR37532 1 64 9.1E-31 T 21-04-2016 VFU_RS13510 bd9747b30d146df5ca3ef12a859efc08 64 Pfam PF04384 Iron-sulphur cluster assembly 1 63 4.1E-33 T 21-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VFU_RS13510 bd9747b30d146df5ca3ef12a859efc08 64 SUPERFAMILY SSF140319 1 62 4.18E-28 T 21-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VFU_RS13510 bd9747b30d146df5ca3ef12a859efc08 64 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 64 7.8E-35 T 21-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VFU_RS13510 bd9747b30d146df5ca3ef12a859efc08 64 Gene3D G3DSA:1.10.10.600 1 64 4.3E-34 T 21-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VFU_RS13510 bd9747b30d146df5ca3ef12a859efc08 64 PIRSF PIRSF039003 1 64 1.1E-34 T 21-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VFU_RS07900 03fb651aba90d99469234fe590e43052 233 Hamap MF_00689 Putative arginyl-tRNA--protein transferase [ate]. 1 233 37.365 T 21-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic VFU_RS07900 03fb651aba90d99469234fe590e43052 233 PIRSF PIRSF037208 1 233 2.7E-84 T 21-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic VFU_RS07900 03fb651aba90d99469234fe590e43052 233 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 16 86 2.1E-19 T 21-04-2016 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 VFU_RS07900 03fb651aba90d99469234fe590e43052 233 PANTHER PTHR21367 7 232 9.5E-68 T 21-04-2016 IPR030700 Arginine-tRNA-protein transferase VFU_RS07900 03fb651aba90d99469234fe590e43052 233 SUPERFAMILY SSF55729 79 232 1.03E-24 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase VFU_RS07900 03fb651aba90d99469234fe590e43052 233 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 106 226 9.9E-34 T 21-04-2016 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 VFU_RS07900 03fb651aba90d99469234fe590e43052 233 PANTHER PTHR21367:SF0 7 232 9.5E-68 T 21-04-2016 VFU_RS11980 d419fe3030e0a64e2cb16ce2a6598e60 270 PANTHER PTHR13696:SF1 1 258 5.7E-93 T 21-04-2016 VFU_RS11980 d419fe3030e0a64e2cb16ce2a6598e60 270 SUPERFAMILY SSF52540 1 268 3.68E-53 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS11980 d419fe3030e0a64e2cb16ce2a6598e60 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 3 268 4.6E-110 T 21-04-2016 IPR010223 ATP binding protein MinD, bacterial-type GO:0000918|GO:0016887 VFU_RS11980 d419fe3030e0a64e2cb16ce2a6598e60 270 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 217 3.3E-26 T 21-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain VFU_RS11980 d419fe3030e0a64e2cb16ce2a6598e60 270 PANTHER PTHR13696 1 258 5.7E-93 T 21-04-2016 VFU_RS11980 d419fe3030e0a64e2cb16ce2a6598e60 270 Gene3D G3DSA:3.40.50.300 1 248 3.3E-59 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS11980 d419fe3030e0a64e2cb16ce2a6598e60 270 PIRSF PIRSF003092 1 270 2.7E-94 T 21-04-2016 IPR025501 ATP binding protein MinD VFU_RS14530 f777cabaeee57626751a36ce0d314561 237 PANTHER PTHR32125 5 236 2.1E-82 T 21-04-2016 VFU_RS14530 f777cabaeee57626751a36ce0d314561 237 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 227 1.2E-78 T 21-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 VFU_RS14530 f777cabaeee57626751a36ce0d314561 237 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 4 229 31.638 T 21-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 VFU_RS14530 f777cabaeee57626751a36ce0d314561 237 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 102 109 - T 21-04-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 VFU_RS14530 f777cabaeee57626751a36ce0d314561 237 PANTHER PTHR32125:SF4 5 236 2.1E-82 T 21-04-2016 VFU_RS14530 f777cabaeee57626751a36ce0d314561 237 SUPERFAMILY SSF53448 4 227 5.42E-60 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VFU_RS14530 f777cabaeee57626751a36ce0d314561 237 Gene3D G3DSA:3.90.550.10 2 228 5.9E-75 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VFU_RS14530 f777cabaeee57626751a36ce0d314561 237 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 7 226 4.3E-75 T 21-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 VFU_RS22140 3b8251c5e19b6c112648b1b0ebcdb1ea 297 PANTHER PTHR30443:SF0 26 297 3.4E-62 T 21-04-2016 VFU_RS22140 3b8251c5e19b6c112648b1b0ebcdb1ea 297 Pfam PF08019 Domain of unknown function (DUF1705) 81 232 4.5E-43 T 21-04-2016 IPR012549 Domain of unknown function DUF1705 GO:0016021 VFU_RS22140 3b8251c5e19b6c112648b1b0ebcdb1ea 297 PANTHER PTHR30443 26 297 3.4E-62 T 21-04-2016 VFU_RS04770 eb1349933a4aa638b2ab1ace3304c016 271 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 21-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 VFU_RS04770 eb1349933a4aa638b2ab1ace3304c016 271 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 257 7.9E-84 T 21-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 VFU_RS04770 eb1349933a4aa638b2ab1ace3304c016 271 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 4 262 6.2E-93 T 21-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 VFU_RS04770 eb1349933a4aa638b2ab1ace3304c016 271 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 262 20.332 T 21-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 VFU_RS04770 eb1349933a4aa638b2ab1ace3304c016 271 PANTHER PTHR30589:SF0 2 261 1.2E-124 T 21-04-2016 VFU_RS04770 eb1349933a4aa638b2ab1ace3304c016 271 PANTHER PTHR30589 2 261 1.2E-124 T 21-04-2016 VFU_RS10675 2cde8e7fc6a91e433b9e8524c042e3ee 289 Gene3D G3DSA:1.10.10.10 4 87 5.3E-23 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS10675 2cde8e7fc6a91e433b9e8524c042e3ee 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 8.3E-17 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS10675 2cde8e7fc6a91e433b9e8524c042e3ee 289 Gene3D G3DSA:3.40.190.10 192 237 4.2E-8 T 21-04-2016 VFU_RS10675 2cde8e7fc6a91e433b9e8524c042e3ee 289 SUPERFAMILY SSF46785 4 112 9.53E-21 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS10675 2cde8e7fc6a91e433b9e8524c042e3ee 289 SUPERFAMILY SSF53850 90 287 5.02E-25 T 21-04-2016 VFU_RS10675 2cde8e7fc6a91e433b9e8524c042e3ee 289 Gene3D G3DSA:3.40.190.10 88 191 7.6E-19 T 21-04-2016 VFU_RS10675 2cde8e7fc6a91e433b9e8524c042e3ee 289 PANTHER PTHR30579 1 285 1.1E-54 T 21-04-2016 VFU_RS10675 2cde8e7fc6a91e433b9e8524c042e3ee 289 PANTHER PTHR30579:SF0 1 285 1.1E-54 T 21-04-2016 VFU_RS10675 2cde8e7fc6a91e433b9e8524c042e3ee 289 Pfam PF03466 LysR substrate binding domain 89 281 2.8E-24 T 21-04-2016 IPR005119 LysR, substrate-binding VFU_RS05255 15f95695ceb28ee8693267eaf9308f5d 280 PANTHER PTHR11741 1 280 7.6E-127 T 21-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 VFU_RS05255 15f95695ceb28ee8693267eaf9308f5d 280 Gene3D G3DSA:3.30.479.20 225 263 3.3E-27 T 21-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 VFU_RS05255 15f95695ceb28ee8693267eaf9308f5d 280 Gene3D G3DSA:3.30.479.20 56 92 3.3E-27 T 21-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 VFU_RS05255 15f95695ceb28ee8693267eaf9308f5d 280 Gene3D G3DSA:3.30.479.20 164 179 3.3E-27 T 21-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 VFU_RS05255 15f95695ceb28ee8693267eaf9308f5d 280 SUPERFAMILY SSF54713 141 277 2.88E-46 T 21-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 VFU_RS05255 15f95695ceb28ee8693267eaf9308f5d 280 Hamap MF_00050 Elongation factor Ts [tsf]. 1 279 77.427 T 21-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 VFU_RS05255 15f95695ceb28ee8693267eaf9308f5d 280 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 21-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 VFU_RS05255 15f95695ceb28ee8693267eaf9308f5d 280 SUPERFAMILY SSF46934 3 53 2.86E-18 T 21-04-2016 IPR009060 UBA-like GO:0005515 VFU_RS05255 15f95695ceb28ee8693267eaf9308f5d 280 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 279 2.8E-105 T 21-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 VFU_RS05255 15f95695ceb28ee8693267eaf9308f5d 280 Gene3D G3DSA:1.10.8.10 1 54 2.3E-27 T 21-04-2016 VFU_RS05255 15f95695ceb28ee8693267eaf9308f5d 280 SUPERFAMILY SSF54713 55 137 7.19E-19 T 21-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 VFU_RS05255 15f95695ceb28ee8693267eaf9308f5d 280 Pfam PF00889 Elongation factor TS 70 260 8.0E-63 T 21-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 VFU_RS05255 15f95695ceb28ee8693267eaf9308f5d 280 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 21-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 VFU_RS05255 15f95695ceb28ee8693267eaf9308f5d 280 Gene3D G3DSA:1.10.286.20 180 224 2.1E-21 T 21-04-2016 VFU_RS07750 04bea8564c82cec0fb84d970dd2e1d04 425 PANTHER PTHR10742 1 413 5.1E-228 T 21-04-2016 VFU_RS07750 04bea8564c82cec0fb84d970dd2e1d04 425 Gene3D G3DSA:3.50.50.60 134 135 8.1E-29 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS07750 04bea8564c82cec0fb84d970dd2e1d04 425 Gene3D G3DSA:3.50.50.60 1 93 8.1E-29 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS07750 04bea8564c82cec0fb84d970dd2e1d04 425 Gene3D G3DSA:3.50.50.60 200 301 8.1E-29 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS07750 04bea8564c82cec0fb84d970dd2e1d04 425 Pfam PF01593 Flavin containing amine oxidoreductase 10 326 6.1E-23 T 21-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 VFU_RS07750 04bea8564c82cec0fb84d970dd2e1d04 425 SUPERFAMILY SSF51905 382 412 1.81E-50 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS07750 04bea8564c82cec0fb84d970dd2e1d04 425 SUPERFAMILY SSF51905 1 299 1.81E-50 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS07750 04bea8564c82cec0fb84d970dd2e1d04 425 PANTHER PTHR10742:SF275 1 413 5.1E-228 T 21-04-2016 VFU_RS05420 86810a169eeb5f428e0ef5ff0a0ad29b 347 PANTHER PTHR21600:SF24 1 300 1.5E-150 T 21-04-2016 VFU_RS05420 86810a169eeb5f428e0ef5ff0a0ad29b 347 SUPERFAMILY SSF55120 66 227 2.88E-38 T 21-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS05420 86810a169eeb5f428e0ef5ff0a0ad29b 347 PANTHER PTHR21600 1 300 1.5E-150 T 21-04-2016 VFU_RS05420 86810a169eeb5f428e0ef5ff0a0ad29b 347 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 102 116 - T 21-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VFU_RS05420 86810a169eeb5f428e0ef5ff0a0ad29b 347 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 71 224 4.0E-47 T 21-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VFU_RS05420 86810a169eeb5f428e0ef5ff0a0ad29b 347 SUPERFAMILY SSF55174 5 98 1.85E-15 T 21-04-2016 VFU_RS05420 86810a169eeb5f428e0ef5ff0a0ad29b 347 Pfam PF00849 RNA pseudouridylate synthase 67 193 8.3E-13 T 21-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS05420 86810a169eeb5f428e0ef5ff0a0ad29b 347 Pfam PF01479 S4 domain 8 51 2.2E-10 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VFU_RS05420 86810a169eeb5f428e0ef5ff0a0ad29b 347 Gene3D G3DSA:3.10.290.10 7 68 3.6E-24 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VFU_RS05420 86810a169eeb5f428e0ef5ff0a0ad29b 347 SMART SM00363 7 69 1.9E-10 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VFU_RS01555 3cc607522320126aea857bba7e626e21 473 SUPERFAMILY SSF103190 60 162 7.38E-7 T 21-04-2016 IPR029151 Periplasmic sensor domain-like VFU_RS01555 3cc607522320126aea857bba7e626e21 473 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 311 463 1.5E-28 T 21-04-2016 IPR000160 GGDEF domain VFU_RS01555 3cc607522320126aea857bba7e626e21 473 SMART SM00267 300 465 5.8E-27 T 21-04-2016 IPR000160 GGDEF domain VFU_RS01555 3cc607522320126aea857bba7e626e21 473 SUPERFAMILY SSF55073 316 462 1.41E-33 T 21-04-2016 IPR029787 Nucleotide cyclase VFU_RS01555 3cc607522320126aea857bba7e626e21 473 Gene3D G3DSA:3.30.70.270 314 462 3.6E-37 T 21-04-2016 VFU_RS01555 3cc607522320126aea857bba7e626e21 473 Gene3D G3DSA:3.30.450.20 69 157 3.5E-8 T 21-04-2016 VFU_RS01555 3cc607522320126aea857bba7e626e21 473 Pfam PF00990 Diguanylate cyclase, GGDEF domain 313 461 4.4E-29 T 21-04-2016 IPR000160 GGDEF domain VFU_RS02050 110c510d2693f85180167c3dee392680 501 Gene3D G3DSA:3.40.50.300 8 233 4.7E-62 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS02050 110c510d2693f85180167c3dee392680 501 SMART SM00382 35 223 1.8E-14 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS02050 110c510d2693f85180167c3dee392680 501 SMART SM00382 286 480 0.12 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS02050 110c510d2693f85180167c3dee392680 501 SUPERFAMILY SSF52540 10 232 2.51E-58 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS02050 110c510d2693f85180167c3dee392680 501 SUPERFAMILY SSF52540 271 489 1.03E-44 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS02050 110c510d2693f85180167c3dee392680 501 PANTHER PTHR24220 12 386 3.1E-229 T 21-04-2016 VFU_RS02050 110c510d2693f85180167c3dee392680 501 ProSitePatterns PS00211 ABC transporters family signature. 404 418 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS02050 110c510d2693f85180167c3dee392680 501 Pfam PF00005 ABC transporter 280 431 1.2E-19 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS02050 110c510d2693f85180167c3dee392680 501 Pfam PF00005 ABC transporter 26 175 2.7E-30 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS02050 110c510d2693f85180167c3dee392680 501 Gene3D G3DSA:3.40.50.300 271 490 1.7E-47 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS02050 110c510d2693f85180167c3dee392680 501 PANTHER PTHR24220:SF440 12 386 3.1E-229 T 21-04-2016 VFU_RS06755 d3dea88d794c83efacfffc4bf810cc0d 226 PANTHER PTHR30435:SF15 21 212 2.5E-30 T 21-04-2016 VFU_RS06755 d3dea88d794c83efacfffc4bf810cc0d 226 Pfam PF03963 Flagellar hook capping protein - N-terminal region 15 84 2.0E-18 T 21-04-2016 IPR005648 Flagellar hook capping protein VFU_RS06755 d3dea88d794c83efacfffc4bf810cc0d 226 Pfam PF13860 FlgD Ig-like domain 111 182 1.5E-10 T 21-04-2016 IPR025965 FlgD Ig-like domain VFU_RS06755 d3dea88d794c83efacfffc4bf810cc0d 226 Pfam PF13861 FlgD Tudor-like domain 93 222 1.3E-12 T 21-04-2016 IPR025963 FlgD Tudor-like domain VFU_RS06755 d3dea88d794c83efacfffc4bf810cc0d 226 PANTHER PTHR30435 21 212 2.5E-30 T 21-04-2016 VFU_RS07680 0045064381f7f405cf5e7527c61fb1b5 194 SMART SM01012 131 186 6.1E-20 T 21-04-2016 IPR005561 ANTAR domain GO:0003723 VFU_RS07680 0045064381f7f405cf5e7527c61fb1b5 194 SUPERFAMILY SSF52172 7 186 2.04E-24 T 21-04-2016 IPR011006 CheY-like superfamily VFU_RS07680 0045064381f7f405cf5e7527c61fb1b5 194 Gene3D G3DSA:1.10.10.10 134 190 1.6E-22 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS07680 0045064381f7f405cf5e7527c61fb1b5 194 Pfam PF03861 ANTAR domain 134 186 3.7E-19 T 21-04-2016 IPR005561 ANTAR domain GO:0003723 VFU_RS01425 a70b1cca64317867ff79f4707d287af9 377 Pfam PF02222 ATP-grasp domain 101 274 1.1E-50 T 21-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 VFU_RS01425 a70b1cca64317867ff79f4707d287af9 377 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 2 346 37.485 T 21-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 VFU_RS01425 a70b1cca64317867ff79f4707d287af9 377 SUPERFAMILY SSF56059 92 295 3.54E-57 T 21-04-2016 VFU_RS01425 a70b1cca64317867ff79f4707d287af9 377 SUPERFAMILY SSF52440 1 88 6.19E-16 T 21-04-2016 IPR016185 Pre-ATP-grasp domain VFU_RS01425 a70b1cca64317867ff79f4707d287af9 377 Gene3D G3DSA:3.40.50.20 1 82 2.1E-21 T 21-04-2016 IPR016185 Pre-ATP-grasp domain VFU_RS01425 a70b1cca64317867ff79f4707d287af9 377 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 2 350 7.4E-106 T 21-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 VFU_RS01425 a70b1cca64317867ff79f4707d287af9 377 Gene3D G3DSA:3.30.1490.20 107 166 2.1E-22 T 21-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VFU_RS01425 a70b1cca64317867ff79f4707d287af9 377 PANTHER PTHR11609 3 353 9.4E-115 T 21-04-2016 VFU_RS01425 a70b1cca64317867ff79f4707d287af9 377 Gene3D G3DSA:3.30.470.20 177 360 2.1E-63 T 21-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VFU_RS01425 a70b1cca64317867ff79f4707d287af9 377 SUPERFAMILY SSF51246 299 371 2.67E-19 T 21-04-2016 IPR011054 Rudiment single hybrid motif VFU_RS01425 a70b1cca64317867ff79f4707d287af9 377 PANTHER PTHR11609:SF5 3 353 9.4E-115 T 21-04-2016 VFU_RS06100 b71a1afbcf2dd4a1d053a41e3c46d1c4 548 SUPERFAMILY SSF53738 209 317 6.94E-8 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VFU_RS06100 b71a1afbcf2dd4a1d053a41e3c46d1c4 548 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 490 537 1.4E-6 T 21-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VFU_RS06100 b71a1afbcf2dd4a1d053a41e3c46d1c4 548 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 21-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VFU_RS06100 b71a1afbcf2dd4a1d053a41e3c46d1c4 548 Gene3D G3DSA:3.40.120.10 226 317 5.3E-44 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VFU_RS06100 b71a1afbcf2dd4a1d053a41e3c46d1c4 548 SUPERFAMILY SSF53738 305 446 1.18E-31 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VFU_RS06100 b71a1afbcf2dd4a1d053a41e3c46d1c4 548 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 544 0.0 T 21-04-2016 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|MetaCyc: PWY-7343 VFU_RS06100 b71a1afbcf2dd4a1d053a41e3c46d1c4 548 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 179 6.6E-40 T 21-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VFU_RS06100 b71a1afbcf2dd4a1d053a41e3c46d1c4 548 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 438 2.4E-29 T 21-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VFU_RS06100 b71a1afbcf2dd4a1d053a41e3c46d1c4 548 Gene3D G3DSA:3.30.310.50 466 544 2.3E-30 T 21-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VFU_RS06100 b71a1afbcf2dd4a1d053a41e3c46d1c4 548 PANTHER PTHR22573:SF52 19 548 6.2E-284 T 21-04-2016 VFU_RS06100 b71a1afbcf2dd4a1d053a41e3c46d1c4 548 SUPERFAMILY SSF55957 432 544 1.44E-19 T 21-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VFU_RS06100 b71a1afbcf2dd4a1d053a41e3c46d1c4 548 PANTHER PTHR22573 19 548 6.2E-284 T 21-04-2016 VFU_RS06100 b71a1afbcf2dd4a1d053a41e3c46d1c4 548 Gene3D G3DSA:3.40.120.10 30 225 2.8E-60 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VFU_RS06100 b71a1afbcf2dd4a1d053a41e3c46d1c4 548 SUPERFAMILY SSF53738 26 235 5.65E-52 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VFU_RS06100 b71a1afbcf2dd4a1d053a41e3c46d1c4 548 Gene3D G3DSA:3.40.120.10 318 441 2.0E-35 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VFU_RS06100 b71a1afbcf2dd4a1d053a41e3c46d1c4 548 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 1.9E-17 T 21-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VFU_RS12755 31f175ee09f885946be6fbec1783354e 134 SMART SM00422 1 70 2.6E-27 T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VFU_RS12755 31f175ee09f885946be6fbec1783354e 134 Gene3D G3DSA:1.10.1660.10 1 55 6.4E-24 T 21-04-2016 VFU_RS12755 31f175ee09f885946be6fbec1783354e 134 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VFU_RS12755 31f175ee09f885946be6fbec1783354e 134 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 127 4.3E-56 T 21-04-2016 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 VFU_RS12755 31f175ee09f885946be6fbec1783354e 134 PANTHER PTHR30204:SF16 1 132 9.0E-68 T 21-04-2016 VFU_RS12755 31f175ee09f885946be6fbec1783354e 134 PANTHER PTHR30204 1 132 9.0E-68 T 21-04-2016 VFU_RS12755 31f175ee09f885946be6fbec1783354e 134 Gene3D G3DSA:1.10.1660.10 56 131 2.1E-23 T 21-04-2016 VFU_RS12755 31f175ee09f885946be6fbec1783354e 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 9.5E-7 T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VFU_RS12755 31f175ee09f885946be6fbec1783354e 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 9.5E-7 T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VFU_RS12755 31f175ee09f885946be6fbec1783354e 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 9.5E-7 T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VFU_RS12755 31f175ee09f885946be6fbec1783354e 134 Pfam PF13411 MerR HTH family regulatory protein 1 67 4.2E-18 T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VFU_RS12755 31f175ee09f885946be6fbec1783354e 134 SUPERFAMILY SSF46955 1 126 2.01E-34 T 21-04-2016 IPR009061 Putative DNA-binding domain VFU_RS06620 84c8b4a5318cdfa230c002d1a1126052 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 1.9E-21 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS06620 84c8b4a5318cdfa230c002d1a1126052 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 1.9E-21 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS06620 84c8b4a5318cdfa230c002d1a1126052 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 1.9E-21 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS06620 84c8b4a5318cdfa230c002d1a1126052 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 1.9E-21 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS06620 84c8b4a5318cdfa230c002d1a1126052 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 1.9E-21 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS06620 84c8b4a5318cdfa230c002d1a1126052 247 Pfam PF00106 short chain dehydrogenase 13 209 3.4E-51 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS06620 84c8b4a5318cdfa230c002d1a1126052 247 PANTHER PTHR24322 17 149 6.9E-80 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS06620 84c8b4a5318cdfa230c002d1a1126052 247 PANTHER PTHR24322 165 196 6.9E-80 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VFU_RS06620 84c8b4a5318cdfa230c002d1a1126052 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 21-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VFU_RS06620 84c8b4a5318cdfa230c002d1a1126052 247 Gene3D G3DSA:3.40.50.720 8 243 2.6E-67 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS06620 84c8b4a5318cdfa230c002d1a1126052 247 SUPERFAMILY SSF51735 9 242 7.39E-63 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS06620 84c8b4a5318cdfa230c002d1a1126052 247 PANTHER PTHR24322:SF337 165 196 6.9E-80 T 21-04-2016 VFU_RS06620 84c8b4a5318cdfa230c002d1a1126052 247 PANTHER PTHR24322:SF337 17 149 6.9E-80 T 21-04-2016 VFU_RS04835 f42721b93c14d3d374d3e621777a3160 113 Pfam PF10973 Protein of unknown function (DUF2799) 28 108 2.1E-21 T 21-04-2016 IPR021242 Protein of unknown function DUF2799 VFU_RS03975 49a90863cb2e5356b7454c1cd635ff2d 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 63 1.7E-9 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VFU_RS03975 49a90863cb2e5356b7454c1cd635ff2d 210 Pfam PF14514 Transcriptional regulator, TetR, C-terminal 87 207 7.4E-6 T 21-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal VFU_RS03975 49a90863cb2e5356b7454c1cd635ff2d 210 SUPERFAMILY SSF48498 88 206 1.63E-6 T 21-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal VFU_RS03975 49a90863cb2e5356b7454c1cd635ff2d 210 SUPERFAMILY SSF46689 7 84 2.26E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS03975 49a90863cb2e5356b7454c1cd635ff2d 210 PANTHER PTHR30055 1 173 2.2E-55 T 21-04-2016 VFU_RS03975 49a90863cb2e5356b7454c1cd635ff2d 210 PANTHER PTHR30055:SF42 1 173 2.2E-55 T 21-04-2016 VFU_RS03975 49a90863cb2e5356b7454c1cd635ff2d 210 Gene3D G3DSA:1.10.357.10 2 205 2.0E-40 T 21-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 VFU_RS09115 4bd4f8d08737828641a473d8a0ddf0c0 303 Pfam PF00480 ROK family 2 301 3.9E-74 T 21-04-2016 IPR000600 ROK family VFU_RS09115 4bd4f8d08737828641a473d8a0ddf0c0 303 PANTHER PTHR18964:SF134 1 302 3.3E-154 T 21-04-2016 VFU_RS09115 4bd4f8d08737828641a473d8a0ddf0c0 303 ProSitePatterns PS01125 ROK family signature. 130 157 - T 21-04-2016 IPR000600 ROK family VFU_RS09115 4bd4f8d08737828641a473d8a0ddf0c0 303 PANTHER PTHR18964 1 302 3.3E-154 T 21-04-2016 VFU_RS09115 4bd4f8d08737828641a473d8a0ddf0c0 303 Gene3D G3DSA:3.30.420.40 133 281 1.0E-43 T 21-04-2016 VFU_RS09115 4bd4f8d08737828641a473d8a0ddf0c0 303 SUPERFAMILY SSF53067 1 300 7.41E-58 T 21-04-2016 VFU_RS09115 4bd4f8d08737828641a473d8a0ddf0c0 303 Gene3D G3DSA:3.30.420.40 1 132 7.0E-39 T 21-04-2016 VFU_RS09115 4bd4f8d08737828641a473d8a0ddf0c0 303 Hamap MF_01271 N-acetyl-D-glucosamine kinase [nagK]. 1 303 64.342 T 21-04-2016 IPR023505 N-acetyl-D-glucosamine kinase GO:0045127 KEGG: 00520+2.7.1.59|MetaCyc: PWY-6517|MetaCyc: PWY-6906|UniPathway: UPA00544 VFU_RS12505 2a49c781c76722934420326be43d1aad 296 PANTHER PTHR30135:SF3 1 296 7.6E-110 T 21-04-2016 VFU_RS12505 2a49c781c76722934420326be43d1aad 296 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 9 267 3.0E-101 T 21-04-2016 IPR010119 Gluconeogenesis factor VFU_RS12505 2a49c781c76722934420326be43d1aad 296 Gene3D G3DSA:3.40.50.10680 79 294 3.0E-52 T 21-04-2016 VFU_RS12505 2a49c781c76722934420326be43d1aad 296 PANTHER PTHR30135 1 296 7.6E-110 T 21-04-2016 VFU_RS12505 2a49c781c76722934420326be43d1aad 296 Hamap MF_00973 Gluconeogenesis factor. 5 296 30.188 T 21-04-2016 IPR010119 Gluconeogenesis factor VFU_RS12505 2a49c781c76722934420326be43d1aad 296 Pfam PF01933 Uncharacterised protein family UPF0052 9 286 4.5E-73 T 21-04-2016 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 VFU_RS12505 2a49c781c76722934420326be43d1aad 296 SUPERFAMILY SSF142338 6 291 1.44E-83 T 21-04-2016 VFU_RS02955 542801d07079bb0880e4f66ce0633298 145 PANTHER PTHR34980:SF1 1 142 1.2E-28 T 21-04-2016 VFU_RS02955 542801d07079bb0880e4f66ce0633298 145 Pfam PF05656 Protein of unknown function (DUF805) 8 142 1.1E-20 T 21-04-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 VFU_RS02955 542801d07079bb0880e4f66ce0633298 145 PANTHER PTHR34980 1 142 1.2E-28 T 21-04-2016 VFU_RS00045 483d4ee95856f438eb04c9644a5f27dd 326 SMART SM00320 192 230 0.01 T 21-04-2016 IPR001680 WD40 repeat GO:0005515 VFU_RS00045 483d4ee95856f438eb04c9644a5f27dd 326 SMART SM00320 236 274 0.58 T 21-04-2016 IPR001680 WD40 repeat GO:0005515 VFU_RS00045 483d4ee95856f438eb04c9644a5f27dd 326 SMART SM00320 151 189 2.1E-6 T 21-04-2016 IPR001680 WD40 repeat GO:0005515 VFU_RS00045 483d4ee95856f438eb04c9644a5f27dd 326 SMART SM00320 285 323 78.0 T 21-04-2016 IPR001680 WD40 repeat GO:0005515 VFU_RS00045 483d4ee95856f438eb04c9644a5f27dd 326 SMART SM00320 56 106 350.0 T 21-04-2016 IPR001680 WD40 repeat GO:0005515 VFU_RS00045 483d4ee95856f438eb04c9644a5f27dd 326 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 176 190 - T 21-04-2016 IPR019775 WD40 repeat, conserved site VFU_RS00045 483d4ee95856f438eb04c9644a5f27dd 326 Pfam PF13360 PQQ-like domain 52 236 4.2E-5 T 21-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat VFU_RS00045 483d4ee95856f438eb04c9644a5f27dd 326 SUPERFAMILY SSF50998 24 318 4.47E-46 T 21-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily VFU_RS00045 483d4ee95856f438eb04c9644a5f27dd 326 Gene3D G3DSA:2.130.10.10 90 325 3.7E-41 T 21-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 VFU_RS00045 483d4ee95856f438eb04c9644a5f27dd 326 Gene3D G3DSA:2.130.10.10 38 89 1.4E-4 T 21-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 VFU_RS00045 483d4ee95856f438eb04c9644a5f27dd 326 PANTHER PTHR22847 109 285 3.2E-22 T 21-04-2016 VFU_RS00045 483d4ee95856f438eb04c9644a5f27dd 326 PANTHER PTHR22847 38 63 3.2E-22 T 21-04-2016 VFU_RS14625 eb718d4b9441143397746b9b01b0034d 190 Pfam PF01381 Helix-turn-helix 41 87 2.7E-5 T 21-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VFU_RS14625 eb718d4b9441143397746b9b01b0034d 190 SUPERFAMILY SSF47413 40 94 3.1E-8 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VFU_RS14625 eb718d4b9441143397746b9b01b0034d 190 Gene3D G3DSA:1.10.260.40 38 92 2.4E-10 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VFU_RS04330 97a3994c0b94605a25b061a7d738f9ce 475 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 3.2E-35 T 21-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VFU_RS04330 97a3994c0b94605a25b061a7d738f9ce 475 PANTHER PTHR22912 1 459 1.8E-271 T 21-04-2016 VFU_RS04330 97a3994c0b94605a25b061a7d738f9ce 475 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 4.8E-63 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS04330 97a3994c0b94605a25b061a7d738f9ce 475 Gene3D G3DSA:3.30.390.30 336 462 2.8E-44 T 21-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VFU_RS04330 97a3994c0b94605a25b061a7d738f9ce 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 4.1E-68 T 21-04-2016 VFU_RS04330 97a3994c0b94605a25b061a7d738f9ce 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 4.1E-68 T 21-04-2016 VFU_RS04330 97a3994c0b94605a25b061a7d738f9ce 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 4.1E-68 T 21-04-2016 VFU_RS04330 97a3994c0b94605a25b061a7d738f9ce 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 4.1E-68 T 21-04-2016 VFU_RS04330 97a3994c0b94605a25b061a7d738f9ce 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 4.1E-68 T 21-04-2016 VFU_RS04330 97a3994c0b94605a25b061a7d738f9ce 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 4.1E-68 T 21-04-2016 VFU_RS04330 97a3994c0b94605a25b061a7d738f9ce 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 4.1E-68 T 21-04-2016 VFU_RS04330 97a3994c0b94605a25b061a7d738f9ce 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 4.1E-68 T 21-04-2016 VFU_RS04330 97a3994c0b94605a25b061a7d738f9ce 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 4.1E-68 T 21-04-2016 VFU_RS04330 97a3994c0b94605a25b061a7d738f9ce 475 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 8 460 2.3E-149 T 21-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 VFU_RS04330 97a3994c0b94605a25b061a7d738f9ce 475 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 21-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 VFU_RS04330 97a3994c0b94605a25b061a7d738f9ce 475 PANTHER PTHR22912:SF160 1 459 1.8E-271 T 21-04-2016 VFU_RS04330 97a3994c0b94605a25b061a7d738f9ce 475 PIRSF PIRSF000350 1 469 6.0E-83 T 21-04-2016 VFU_RS04330 97a3994c0b94605a25b061a7d738f9ce 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 6.0E-41 T 21-04-2016 VFU_RS04330 97a3994c0b94605a25b061a7d738f9ce 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 6.0E-41 T 21-04-2016 VFU_RS04330 97a3994c0b94605a25b061a7d738f9ce 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 6.0E-41 T 21-04-2016 VFU_RS04330 97a3994c0b94605a25b061a7d738f9ce 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 6.0E-41 T 21-04-2016 VFU_RS04330 97a3994c0b94605a25b061a7d738f9ce 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 6.0E-41 T 21-04-2016 VFU_RS04330 97a3994c0b94605a25b061a7d738f9ce 475 Gene3D G3DSA:3.50.50.60 272 335 4.3E-67 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS04330 97a3994c0b94605a25b061a7d738f9ce 475 Gene3D G3DSA:3.50.50.60 6 149 4.3E-67 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS04330 97a3994c0b94605a25b061a7d738f9ce 475 SUPERFAMILY SSF55424 343 466 6.36E-39 T 21-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 VFU_RS04330 97a3994c0b94605a25b061a7d738f9ce 475 Gene3D G3DSA:3.50.50.60 152 271 1.2E-34 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS04330 97a3994c0b94605a25b061a7d738f9ce 475 SUPERFAMILY SSF51905 1 322 7.13E-59 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS01855 07e851dfb9678fb98e9b20e005ca504e 174 PANTHER PTHR38030:SF2 1 171 2.3E-91 T 21-04-2016 VFU_RS01855 07e851dfb9678fb98e9b20e005ca504e 174 Pfam PF12724 Flavodoxin domain 4 152 3.8E-50 T 21-04-2016 IPR026816 Flavodoxin domain VFU_RS01855 07e851dfb9678fb98e9b20e005ca504e 174 PANTHER PTHR38030 1 171 2.3E-91 T 21-04-2016 VFU_RS01855 07e851dfb9678fb98e9b20e005ca504e 174 Gene3D G3DSA:3.40.50.360 105 173 1.0E-21 T 21-04-2016 IPR029039 Flavoprotein-like domain VFU_RS01855 07e851dfb9678fb98e9b20e005ca504e 174 Gene3D G3DSA:3.40.50.360 2 71 1.0E-21 T 21-04-2016 IPR029039 Flavoprotein-like domain VFU_RS01855 07e851dfb9678fb98e9b20e005ca504e 174 SUPERFAMILY SSF52218 2 157 6.99E-31 T 21-04-2016 IPR029039 Flavoprotein-like domain VFU_RS12880 a3907b18ce4730e25b99be727b3999dc 391 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 282 372 1.3E-27 T 21-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 VFU_RS12880 a3907b18ce4730e25b99be727b3999dc 391 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 32 262 1.3E-94 T 21-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 VFU_RS12880 a3907b18ce4730e25b99be727b3999dc 391 Gene3D G3DSA:2.60.410.10 282 372 2.8E-33 T 21-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 VFU_RS12880 a3907b18ce4730e25b99be727b3999dc 391 PANTHER PTHR21581:SF4 23 385 2.2E-160 T 21-04-2016 VFU_RS12880 a3907b18ce4730e25b99be727b3999dc 391 SMART SM00936 282 372 1.0E-38 T 21-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 VFU_RS12880 a3907b18ce4730e25b99be727b3999dc 391 PANTHER PTHR21581 23 385 2.2E-160 T 21-04-2016 VFU_RS12880 a3907b18ce4730e25b99be727b3999dc 391 SUPERFAMILY SSF56601 12 282 1.28E-84 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VFU_RS12880 a3907b18ce4730e25b99be727b3999dc 391 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 65 76 4.6E-17 T 21-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VFU_RS12880 a3907b18ce4730e25b99be727b3999dc 391 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 148 161 4.6E-17 T 21-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VFU_RS12880 a3907b18ce4730e25b99be727b3999dc 391 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 121 138 4.6E-17 T 21-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VFU_RS12880 a3907b18ce4730e25b99be727b3999dc 391 Gene3D G3DSA:3.40.710.10 29 281 1.4E-98 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VFU_RS12880 a3907b18ce4730e25b99be727b3999dc 391 SUPERFAMILY SSF69189 282 374 1.39E-28 T 21-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 VFU_RS03765 9d1dcb31fc5e598a87cb55bb921026a3 457 SUPERFAMILY SSF55073 301 451 1.49E-44 T 21-04-2016 IPR029787 Nucleotide cyclase VFU_RS03765 9d1dcb31fc5e598a87cb55bb921026a3 457 Pfam PF00990 Diguanylate cyclase, GGDEF domain 296 448 2.4E-42 T 21-04-2016 IPR000160 GGDEF domain VFU_RS03765 9d1dcb31fc5e598a87cb55bb921026a3 457 Gene3D G3DSA:3.30.70.270 298 451 3.3E-47 T 21-04-2016 VFU_RS03765 9d1dcb31fc5e598a87cb55bb921026a3 457 PANTHER PTHR10799:SF750 29 66 3.4E-29 T 21-04-2016 VFU_RS03765 9d1dcb31fc5e598a87cb55bb921026a3 457 PANTHER PTHR10799:SF750 329 450 3.4E-29 T 21-04-2016 VFU_RS03765 9d1dcb31fc5e598a87cb55bb921026a3 457 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 295 451 1.1E-45 T 21-04-2016 IPR000160 GGDEF domain VFU_RS03765 9d1dcb31fc5e598a87cb55bb921026a3 457 SMART SM00267 285 453 2.9E-56 T 21-04-2016 IPR000160 GGDEF domain VFU_RS03765 9d1dcb31fc5e598a87cb55bb921026a3 457 PANTHER PTHR10799 29 66 3.4E-29 T 21-04-2016 VFU_RS03765 9d1dcb31fc5e598a87cb55bb921026a3 457 PANTHER PTHR10799 329 450 3.4E-29 T 21-04-2016 VFU_RS10855 c11ae2877672bd8b862bf99b2770226d 181 PANTHER PTHR36917:SF1 1 179 1.4E-71 T 21-04-2016 VFU_RS10855 c11ae2877672bd8b862bf99b2770226d 181 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 175 18.578 T 21-04-2016 IPR006008 Intracellular septation protein A GO:0016021 VFU_RS10855 c11ae2877672bd8b862bf99b2770226d 181 Pfam PF04279 Intracellular septation protein A 1 174 8.3E-68 T 21-04-2016 IPR006008 Intracellular septation protein A GO:0016021 VFU_RS10855 c11ae2877672bd8b862bf99b2770226d 181 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 177 4.1E-63 T 21-04-2016 IPR006008 Intracellular septation protein A GO:0016021 VFU_RS10855 c11ae2877672bd8b862bf99b2770226d 181 PANTHER PTHR36917 1 179 1.4E-71 T 21-04-2016 VFU_RS05825 8ceb6902fcb5020b393086383920c4f3 338 SUPERFAMILY SSF51735 3 335 7.25E-96 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS05825 8ceb6902fcb5020b393086383920c4f3 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 324 2.0E-59 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS05825 8ceb6902fcb5020b393086383920c4f3 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 334 3.1E-141 T 21-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 VFU_RS05825 8ceb6902fcb5020b393086383920c4f3 338 PANTHER PTHR10366 2 338 3.9E-153 T 21-04-2016 VFU_RS05825 8ceb6902fcb5020b393086383920c4f3 338 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 2.7E-6 T 21-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 VFU_RS05825 8ceb6902fcb5020b393086383920c4f3 338 PRINTS PR01713 Nucleotide sugar epimerase signature 231 246 2.7E-6 T 21-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 VFU_RS05825 8ceb6902fcb5020b393086383920c4f3 338 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 2.7E-6 T 21-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 VFU_RS05825 8ceb6902fcb5020b393086383920c4f3 338 Gene3D G3DSA:3.40.50.720 3 179 3.3E-50 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS05825 8ceb6902fcb5020b393086383920c4f3 338 Gene3D G3DSA:3.90.25.10 264 337 9.4E-54 T 21-04-2016 VFU_RS05825 8ceb6902fcb5020b393086383920c4f3 338 Gene3D G3DSA:3.90.25.10 180 232 9.4E-54 T 21-04-2016 VFU_RS05825 8ceb6902fcb5020b393086383920c4f3 338 PANTHER PTHR10366:SF39 2 338 3.9E-153 T 21-04-2016 VFU_RS03470 b3f178e8ac9e85614a5b01b00d27a5a2 574 Pfam PF02080 TrkA-C domain 209 278 1.3E-12 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VFU_RS03470 b3f178e8ac9e85614a5b01b00d27a5a2 574 Pfam PF02080 TrkA-C domain 293 349 2.6E-11 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VFU_RS03470 b3f178e8ac9e85614a5b01b00d27a5a2 574 SUPERFAMILY SSF116726 290 349 2.09E-13 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VFU_RS03470 b3f178e8ac9e85614a5b01b00d27a5a2 574 SUPERFAMILY SSF116726 206 283 1.57E-16 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VFU_RS03470 b3f178e8ac9e85614a5b01b00d27a5a2 574 PANTHER PTHR10283 2 216 5.9E-66 T 21-04-2016 VFU_RS03470 b3f178e8ac9e85614a5b01b00d27a5a2 574 PANTHER PTHR10283 284 363 5.9E-66 T 21-04-2016 VFU_RS03470 b3f178e8ac9e85614a5b01b00d27a5a2 574 PANTHER PTHR10283 412 572 5.9E-66 T 21-04-2016 VFU_RS03470 b3f178e8ac9e85614a5b01b00d27a5a2 574 Pfam PF03600 Citrate transporter 30 518 4.2E-25 T 21-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 VFU_RS03470 b3f178e8ac9e85614a5b01b00d27a5a2 574 PANTHER PTHR10283:SF79 2 216 5.9E-66 T 21-04-2016 VFU_RS03470 b3f178e8ac9e85614a5b01b00d27a5a2 574 PANTHER PTHR10283:SF79 284 363 5.9E-66 T 21-04-2016 VFU_RS03470 b3f178e8ac9e85614a5b01b00d27a5a2 574 PANTHER PTHR10283:SF79 412 572 5.9E-66 T 21-04-2016 VFU_RS03470 b3f178e8ac9e85614a5b01b00d27a5a2 574 Gene3D G3DSA:3.30.70.1450 207 287 4.0E-18 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VFU_RS03470 b3f178e8ac9e85614a5b01b00d27a5a2 574 Gene3D G3DSA:3.30.70.1450 290 364 4.2E-15 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VFU_RS08205 fcce6e7c54ce91e0e22624fa0d77af90 461 Gene3D G3DSA:1.20.200.10 134 395 2.9E-85 T 21-04-2016 VFU_RS08205 fcce6e7c54ce91e0e22624fa0d77af90 461 Gene3D G3DSA:1.10.40.30 403 459 1.2E-20 T 21-04-2016 VFU_RS08205 fcce6e7c54ce91e0e22624fa0d77af90 461 ProSitePatterns PS00163 Fumarate lyases signature. 312 321 - T 21-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 VFU_RS08205 fcce6e7c54ce91e0e22624fa0d77af90 461 SUPERFAMILY SSF48557 5 454 5.34E-137 T 21-04-2016 IPR008948 L-Aspartase-like GO:0003824 VFU_RS08205 fcce6e7c54ce91e0e22624fa0d77af90 461 Hamap MF_00743 Fumarate hydratase class II [fumC]. 5 457 75.686 T 21-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 VFU_RS08205 fcce6e7c54ce91e0e22624fa0d77af90 461 Gene3D G3DSA:1.10.275.10 4 133 1.4E-52 T 21-04-2016 IPR024083 Fumarase/histidase, N-terminal VFU_RS08205 fcce6e7c54ce91e0e22624fa0d77af90 461 Pfam PF00206 Lyase 13 337 4.9E-94 T 21-04-2016 IPR022761 Fumarate lyase, N-terminal VFU_RS08205 fcce6e7c54ce91e0e22624fa0d77af90 461 PRINTS PR00149 Fumarate lyase superfamily signature 175 193 9.3E-31 T 21-04-2016 IPR000362 Fumarate lyase family VFU_RS08205 fcce6e7c54ce91e0e22624fa0d77af90 461 PRINTS PR00149 Fumarate lyase superfamily signature 312 328 9.3E-31 T 21-04-2016 IPR000362 Fumarate lyase family VFU_RS08205 fcce6e7c54ce91e0e22624fa0d77af90 461 PRINTS PR00149 Fumarate lyase superfamily signature 266 293 9.3E-31 T 21-04-2016 IPR000362 Fumarate lyase family VFU_RS08205 fcce6e7c54ce91e0e22624fa0d77af90 461 PRINTS PR00149 Fumarate lyase superfamily signature 129 147 9.3E-31 T 21-04-2016 IPR000362 Fumarate lyase family VFU_RS08205 fcce6e7c54ce91e0e22624fa0d77af90 461 PRINTS PR00145 Argininosuccinate lyase family signature 312 328 4.0E-6 T 21-04-2016 VFU_RS08205 fcce6e7c54ce91e0e22624fa0d77af90 461 PRINTS PR00145 Argininosuccinate lyase family signature 128 150 4.0E-6 T 21-04-2016 VFU_RS08205 fcce6e7c54ce91e0e22624fa0d77af90 461 PRINTS PR00145 Argininosuccinate lyase family signature 170 190 4.0E-6 T 21-04-2016 VFU_RS08205 fcce6e7c54ce91e0e22624fa0d77af90 461 PANTHER PTHR11444 1 451 7.8E-278 T 21-04-2016 IPR000362 Fumarate lyase family VFU_RS08205 fcce6e7c54ce91e0e22624fa0d77af90 461 Pfam PF10415 Fumarase C C-terminus 403 455 1.7E-19 T 21-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 VFU_RS08205 fcce6e7c54ce91e0e22624fa0d77af90 461 PANTHER PTHR11444:SF22 1 451 7.8E-278 T 21-04-2016 VFU_RS05815 38336ddd706065f91be82624c9d3e70f 115 PANTHER PTHR30041 1 115 5.5E-48 T 21-04-2016 VFU_RS05815 38336ddd706065f91be82624c9d3e70f 115 Gene3D G3DSA:3.40.30.10 2 114 2.5E-43 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS05815 38336ddd706065f91be82624c9d3e70f 115 PANTHER PTHR30041:SF3 1 115 5.5E-48 T 21-04-2016 VFU_RS05815 38336ddd706065f91be82624c9d3e70f 115 SUPERFAMILY SSF52833 2 114 3.16E-36 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS05815 38336ddd706065f91be82624c9d3e70f 115 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 112 2.1E-30 T 21-04-2016 IPR006504 Transcriptional regulator Spx/MgsR VFU_RS05815 38336ddd706065f91be82624c9d3e70f 115 Pfam PF03960 ArsC family 6 112 1.0E-17 T 21-04-2016 IPR006660 Arsenate reductase-like VFU_RS03540 30e0a64fa271b2ab084e34ddac9fa9a4 115 Pfam PF10973 Protein of unknown function (DUF2799) 30 105 3.0E-15 T 21-04-2016 IPR021242 Protein of unknown function DUF2799 VFU_RS03395 a7cce014599a851da5a362b0f6ba5fe0 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 4.2E-55 T 21-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS03395 a7cce014599a851da5a362b0f6ba5fe0 129 Gene3D G3DSA:3.30.420.80 7 129 1.6E-53 T 21-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VFU_RS03395 a7cce014599a851da5a362b0f6ba5fe0 129 PIRSF PIRSF002131 1 129 1.8E-52 T 21-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VFU_RS03395 a7cce014599a851da5a362b0f6ba5fe0 129 PANTHER PTHR11759 11 129 5.5E-71 T 21-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VFU_RS03395 a7cce014599a851da5a362b0f6ba5fe0 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 32.753 T 21-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VFU_RS03395 a7cce014599a851da5a362b0f6ba5fe0 129 SUPERFAMILY SSF53137 14 129 6.54E-48 T 21-04-2016 VFU_RS03395 a7cce014599a851da5a362b0f6ba5fe0 129 Pfam PF00411 Ribosomal protein S11 19 128 1.5E-52 T 21-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VFU_RS03395 a7cce014599a851da5a362b0f6ba5fe0 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 21-04-2016 IPR018102 Ribosomal S11, conserved site VFU_RS10425 5b3c52e595311555918b4656bd31395d 160 PANTHER PTHR13947:SF7 5 160 4.0E-32 T 21-04-2016 VFU_RS10425 5b3c52e595311555918b4656bd31395d 160 Gene3D G3DSA:3.40.630.30 1 160 5.7E-34 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase VFU_RS10425 5b3c52e595311555918b4656bd31395d 160 PANTHER PTHR13947 5 160 4.0E-32 T 21-04-2016 VFU_RS10425 5b3c52e595311555918b4656bd31395d 160 SUPERFAMILY SSF55729 1 158 9.43E-29 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase VFU_RS10425 5b3c52e595311555918b4656bd31395d 160 Pfam PF00583 Acetyltransferase (GNAT) family 61 138 6.5E-13 T 21-04-2016 IPR000182 GNAT domain GO:0008080 VFU_RS18960 b30bcffac2afba70acac7e1d7723741e 428 Gene3D G3DSA:3.40.220.10 1 95 2.1E-34 T 21-04-2016 VFU_RS18960 b30bcffac2afba70acac7e1d7723741e 428 PANTHER PTHR11963:SF13 1 428 4.3E-233 T 21-04-2016 VFU_RS18960 b30bcffac2afba70acac7e1d7723741e 428 SUPERFAMILY SSF52949 3 118 7.65E-28 T 21-04-2016 VFU_RS18960 b30bcffac2afba70acac7e1d7723741e 428 Gene3D G3DSA:3.40.630.10 105 427 5.8E-139 T 21-04-2016 VFU_RS18960 b30bcffac2afba70acac7e1d7723741e 428 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 4 81 2.2E-16 T 21-04-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VFU_RS18960 b30bcffac2afba70acac7e1d7723741e 428 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 283 290 - T 21-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VFU_RS18960 b30bcffac2afba70acac7e1d7723741e 428 PRINTS PR00481 Cytosol aminopeptidase signature 257 278 2.5E-55 T 21-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VFU_RS18960 b30bcffac2afba70acac7e1d7723741e 428 PRINTS PR00481 Cytosol aminopeptidase signature 279 299 2.5E-55 T 21-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VFU_RS18960 b30bcffac2afba70acac7e1d7723741e 428 PRINTS PR00481 Cytosol aminopeptidase signature 220 241 2.5E-55 T 21-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VFU_RS18960 b30bcffac2afba70acac7e1d7723741e 428 PRINTS PR00481 Cytosol aminopeptidase signature 307 322 2.5E-55 T 21-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VFU_RS18960 b30bcffac2afba70acac7e1d7723741e 428 PRINTS PR00481 Cytosol aminopeptidase signature 198 215 2.5E-55 T 21-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VFU_RS18960 b30bcffac2afba70acac7e1d7723741e 428 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 2 428 34.522 T 21-04-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 VFU_RS18960 b30bcffac2afba70acac7e1d7723741e 428 SUPERFAMILY SSF53187 113 428 5.96E-125 T 21-04-2016 VFU_RS18960 b30bcffac2afba70acac7e1d7723741e 428 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 121 423 3.7E-119 T 21-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VFU_RS18960 b30bcffac2afba70acac7e1d7723741e 428 PANTHER PTHR11963 1 428 4.3E-233 T 21-04-2016 VFU_RS12075 367afbe867dee36a43d743ef54062cbf 294 Gene3D G3DSA:2.70.98.10 13 293 3.9E-87 T 21-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 VFU_RS12075 367afbe867dee36a43d743ef54062cbf 294 PIRSF PIRSF016020 6 294 1.6E-62 T 21-04-2016 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 VFU_RS12075 367afbe867dee36a43d743ef54062cbf 294 Pfam PF01263 Aldose 1-epimerase 27 290 3.4E-50 T 21-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 VFU_RS12075 367afbe867dee36a43d743ef54062cbf 294 SUPERFAMILY SSF74650 6 290 5.84E-75 T 21-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 VFU_RS12075 367afbe867dee36a43d743ef54062cbf 294 PANTHER PTHR11122 3 293 3.2E-98 T 21-04-2016 VFU_RS12075 367afbe867dee36a43d743ef54062cbf 294 PANTHER PTHR11122:SF14 3 293 3.2E-98 T 21-04-2016 VFU_RS22810 a8a8e8a9f7e3452659bbc5e35a1ed6e0 157 Pfam PF00672 HAMP domain 102 156 7.7E-9 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VFU_RS14880 10a47c9b4e7d9f0e4795ee10510ad06a 390 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 378 2.7E-131 T 21-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- VFU_RS14880 10a47c9b4e7d9f0e4795ee10510ad06a 390 SMART SM00729 6 227 5.6E-54 T 21-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 VFU_RS14880 10a47c9b4e7d9f0e4795ee10510ad06a 390 PANTHER PTHR13932:SF7 5 390 1.2E-222 T 21-04-2016 VFU_RS14880 10a47c9b4e7d9f0e4795ee10510ad06a 390 PANTHER PTHR13932 5 390 1.2E-222 T 21-04-2016 VFU_RS14880 10a47c9b4e7d9f0e4795ee10510ad06a 390 SUPERFAMILY SSF102114 4 386 4.84E-110 T 21-04-2016 VFU_RS14880 10a47c9b4e7d9f0e4795ee10510ad06a 390 Gene3D G3DSA:3.80.30.20 7 241 4.4E-29 T 21-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe VFU_RS14880 10a47c9b4e7d9f0e4795ee10510ad06a 390 Pfam PF06969 HemN C-terminal domain 316 374 1.3E-9 T 21-04-2016 IPR010723 HemN, C-terminal VFU_RS14880 10a47c9b4e7d9f0e4795ee10510ad06a 390 Pfam PF04055 Radical SAM superfamily 11 180 9.0E-19 T 21-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VFU_RS10160 0ba44146cea4592c31b3411cab52e99e 187 Pfam PF07209 Protein of unknown function (DUF1415) 10 177 5.7E-66 T 21-04-2016 IPR009858 Protein of unknown function DUF1415 VFU_RS08655 8eac2f7e511e7fad51472df7efd3f40f 466 Gene3D G3DSA:2.40.50.140 15 103 1.5E-16 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS08655 8eac2f7e511e7fad51472df7efd3f40f 466 PANTHER PTHR22594 6 180 6.4E-249 T 21-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VFU_RS08655 8eac2f7e511e7fad51472df7efd3f40f 466 PANTHER PTHR22594 199 465 6.4E-249 T 21-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VFU_RS08655 8eac2f7e511e7fad51472df7efd3f40f 466 SUPERFAMILY SSF50249 15 101 4.71E-17 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS08655 8eac2f7e511e7fad51472df7efd3f40f 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 1.6E-14 T 21-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VFU_RS08655 8eac2f7e511e7fad51472df7efd3f40f 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 1.6E-14 T 21-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VFU_RS08655 8eac2f7e511e7fad51472df7efd3f40f 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 1.6E-14 T 21-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VFU_RS08655 8eac2f7e511e7fad51472df7efd3f40f 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 1.6E-14 T 21-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VFU_RS08655 8eac2f7e511e7fad51472df7efd3f40f 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 7.9E-81 T 21-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VFU_RS08655 8eac2f7e511e7fad51472df7efd3f40f 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 45.803 T 21-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 VFU_RS08655 8eac2f7e511e7fad51472df7efd3f40f 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 1.3E-206 T 21-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 VFU_RS08655 8eac2f7e511e7fad51472df7efd3f40f 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 2.0E-11 T 21-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VFU_RS08655 8eac2f7e511e7fad51472df7efd3f40f 466 PANTHER PTHR22594:SF6 6 180 6.4E-249 T 21-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 VFU_RS08655 8eac2f7e511e7fad51472df7efd3f40f 466 PANTHER PTHR22594:SF6 199 465 6.4E-249 T 21-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 VFU_RS08655 8eac2f7e511e7fad51472df7efd3f40f 466 SUPERFAMILY SSF55681 97 464 1.53E-94 T 21-04-2016 VFU_RS08655 8eac2f7e511e7fad51472df7efd3f40f 466 Gene3D G3DSA:3.30.930.10 109 462 1.7E-111 T 21-04-2016 VFU_RS07245 7e5b81bf2dcb424806d85533fba99746 396 SUPERFAMILY SSF103473 9 391 4.45E-54 T 21-04-2016 IPR020846 Major facilitator superfamily domain VFU_RS07245 7e5b81bf2dcb424806d85533fba99746 396 PANTHER PTHR23501 11 392 1.3E-167 T 21-04-2016 VFU_RS07245 7e5b81bf2dcb424806d85533fba99746 396 Gene3D G3DSA:1.20.1250.20 16 197 1.1E-26 T 21-04-2016 VFU_RS07245 7e5b81bf2dcb424806d85533fba99746 396 Pfam PF07690 Major Facilitator Superfamily 25 323 5.4E-31 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VFU_RS07245 7e5b81bf2dcb424806d85533fba99746 396 PANTHER PTHR23501:SF89 11 392 1.3E-167 T 21-04-2016 VFU_RS07245 7e5b81bf2dcb424806d85533fba99746 396 Gene3D G3DSA:1.20.1250.20 209 391 1.6E-16 T 21-04-2016 VFU_RS01510 eec5f52b7d71f69f515b5da530e3f987 297 Pfam PF01553 Acyltransferase 73 226 1.2E-12 T 21-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VFU_RS01510 eec5f52b7d71f69f515b5da530e3f987 297 SUPERFAMILY SSF69593 4 283 1.12E-25 T 21-04-2016 VFU_RS01510 eec5f52b7d71f69f515b5da530e3f987 297 SMART SM00563 85 227 1.3E-15 T 21-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VFU_RS01510 eec5f52b7d71f69f515b5da530e3f987 297 PANTHER PTHR10983:SF15 1 291 3.4E-135 T 21-04-2016 VFU_RS01510 eec5f52b7d71f69f515b5da530e3f987 297 PANTHER PTHR10983 1 291 3.4E-135 T 21-04-2016 VFU_RS08165 231ffc057db15b63adf2ee2eee7dc88b 129 PANTHER PTHR33885 1 126 9.3E-26 T 21-04-2016 VFU_RS08165 231ffc057db15b63adf2ee2eee7dc88b 129 Pfam PF04024 PspC domain 4 62 1.1E-15 T 21-04-2016 IPR007168 Phage shock protein, PspC, N-terminal VFU_RS08165 231ffc057db15b63adf2ee2eee7dc88b 129 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 3 129 1.7E-46 T 21-04-2016 IPR014320 Phage shock protein, PspC VFU_RS01455 039f473703aff7530abc7288ab0ec4ca 315 SUPERFAMILY SSF53328 5 210 2.35E-67 T 21-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VFU_RS01455 039f473703aff7530abc7288ab0ec4ca 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 21-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VFU_RS01455 039f473703aff7530abc7288ab0ec4ca 315 SUPERFAMILY SSF50486 208 310 6.91E-33 T 21-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 VFU_RS01455 039f473703aff7530abc7288ab0ec4ca 315 Gene3D G3DSA:3.10.25.10 210 307 7.2E-35 T 21-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VFU_RS01455 039f473703aff7530abc7288ab0ec4ca 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 306 37.215 T 21-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VFU_RS01455 039f473703aff7530abc7288ab0ec4ca 315 Pfam PF02911 Formyl transferase, C-terminal domain 207 303 2.4E-28 T 21-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VFU_RS01455 039f473703aff7530abc7288ab0ec4ca 315 Pfam PF00551 Formyl transferase 6 183 1.5E-49 T 21-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VFU_RS01455 039f473703aff7530abc7288ab0ec4ca 315 Gene3D G3DSA:3.40.50.170 4 208 3.2E-75 T 21-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VFU_RS01455 039f473703aff7530abc7288ab0ec4ca 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 311 6.5E-109 T 21-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VFU_RS01455 039f473703aff7530abc7288ab0ec4ca 315 PANTHER PTHR11138 5 307 3.0E-119 T 21-04-2016 VFU_RS07290 7979a2635e7e643b0d0a480952586c7d 312 SUPERFAMILY SSF53807 27 290 2.75E-37 T 21-04-2016 VFU_RS07290 7979a2635e7e643b0d0a480952586c7d 312 PANTHER PTHR30532 1 306 1.0E-96 T 21-04-2016 VFU_RS07290 7979a2635e7e643b0d0a480952586c7d 312 Pfam PF01497 Periplasmic binding protein 46 285 1.0E-19 T 21-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 VFU_RS07290 7979a2635e7e643b0d0a480952586c7d 312 PANTHER PTHR30532:SF2 1 306 1.0E-96 T 21-04-2016 VFU_RS07290 7979a2635e7e643b0d0a480952586c7d 312 Gene3D G3DSA:3.40.50.1980 149 305 4.0E-18 T 21-04-2016 VFU_RS07290 7979a2635e7e643b0d0a480952586c7d 312 Gene3D G3DSA:3.40.50.1980 25 148 4.8E-20 T 21-04-2016 VFU_RS08465 a75be42ce1241944212f2e1718840721 338 PANTHER PTHR33376 1 337 3.0E-54 T 21-04-2016 VFU_RS08465 a75be42ce1241944212f2e1718840721 338 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 41 316 2.0E-45 T 21-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 VFU_RS11040 35f174bf69e4184c5816899ec05cdae6 116 PIRSF PIRSF002889 1 116 2.2E-32 T 21-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 VFU_RS11040 35f174bf69e4184c5816899ec05cdae6 116 Pfam PF00460 Flagella basal body rod protein 21 38 1.8E-6 T 21-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VFU_RS11040 35f174bf69e4184c5816899ec05cdae6 116 PANTHER PTHR30435 1 116 1.3E-34 T 21-04-2016 VFU_RS11040 35f174bf69e4184c5816899ec05cdae6 116 PANTHER PTHR30435:SF12 1 116 1.3E-34 T 21-04-2016 VFU_RS08535 2e193988965d79aa939e1f4f374fa86d 198 SUPERFAMILY SSF142695 19 172 6.93E-55 T 21-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 VFU_RS08535 2e193988965d79aa939e1f4f374fa86d 198 Pfam PF00925 GTP cyclohydrolase II 19 171 6.6E-59 T 21-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 VFU_RS08535 2e193988965d79aa939e1f4f374fa86d 198 PANTHER PTHR21327 21 198 1.9E-76 T 21-04-2016 VFU_RS08535 2e193988965d79aa939e1f4f374fa86d 198 PANTHER PTHR21327:SF6 21 198 1.9E-76 T 21-04-2016 VFU_RS08535 2e193988965d79aa939e1f4f374fa86d 198 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 3 198 37.625 T 21-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 VFU_RS08535 2e193988965d79aa939e1f4f374fa86d 198 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 23 194 3.1E-62 T 21-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 VFU_RS05685 3ffd382fa54cb88c7f4f3724797db39d 290 PANTHER PTHR20861:SF2 4 275 4.5E-96 T 21-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 VFU_RS05685 3ffd382fa54cb88c7f4f3724797db39d 290 Gene3D G3DSA:3.30.230.10 7 160 5.3E-53 T 21-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VFU_RS05685 3ffd382fa54cb88c7f4f3724797db39d 290 SUPERFAMILY SSF54211 6 159 3.64E-45 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VFU_RS05685 3ffd382fa54cb88c7f4f3724797db39d 290 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 6 272 31.982 T 21-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 VFU_RS05685 3ffd382fa54cb88c7f4f3724797db39d 290 Gene3D G3DSA:3.30.70.890 163 279 2.5E-41 T 21-04-2016 IPR013750 GHMP kinase, C-terminal domain VFU_RS05685 3ffd382fa54cb88c7f4f3724797db39d 290 Pfam PF00288 GHMP kinases N terminal domain 88 145 1.3E-8 T 21-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 VFU_RS05685 3ffd382fa54cb88c7f4f3724797db39d 290 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 5 279 1.2E-92 T 21-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 VFU_RS05685 3ffd382fa54cb88c7f4f3724797db39d 290 PANTHER PTHR20861 4 275 4.5E-96 T 21-04-2016 VFU_RS05685 3ffd382fa54cb88c7f4f3724797db39d 290 PIRSF PIRSF010376 4 280 7.4E-86 T 21-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 VFU_RS05685 3ffd382fa54cb88c7f4f3724797db39d 290 Pfam PF08544 GHMP kinases C terminal 196 258 1.2E-6 T 21-04-2016 IPR013750 GHMP kinase, C-terminal domain VFU_RS05685 3ffd382fa54cb88c7f4f3724797db39d 290 SUPERFAMILY SSF55060 162 277 5.28E-34 T 21-04-2016 IPR013750 GHMP kinase, C-terminal domain VFU_RS08320 5c578f5afd1ca9df0b20b540488c9758 259 SUPERFAMILY SSF52266 42 222 6.41E-12 T 21-04-2016 IPR013830 SGNH hydrolase-type esterase domain VFU_RS08320 5c578f5afd1ca9df0b20b540488c9758 259 Gene3D G3DSA:3.40.50.1110 42 221 7.4E-8 T 21-04-2016 IPR013830 SGNH hydrolase-type esterase domain VFU_RS01225 400b83c1bcc20531abbed19f02640046 634 PANTHER PTHR30509:SF1 14 248 2.0E-48 T 21-04-2016 VFU_RS01225 400b83c1bcc20531abbed19f02640046 634 PANTHER PTHR30509:SF1 284 616 2.0E-48 T 21-04-2016 VFU_RS01225 400b83c1bcc20531abbed19f02640046 634 PANTHER PTHR30509 14 248 2.0E-48 T 21-04-2016 VFU_RS01225 400b83c1bcc20531abbed19f02640046 634 PANTHER PTHR30509 284 616 2.0E-48 T 21-04-2016 VFU_RS01225 400b83c1bcc20531abbed19f02640046 634 Pfam PF04632 Fusaric acid resistance protein family 14 630 1.1E-99 T 21-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 VFU_RS03315 a808b53c6312089d9353babc4e32e8d6 233 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 7.7E-99 T 21-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 VFU_RS03315 a808b53c6312089d9353babc4e32e8d6 233 Pfam PF07650 KH domain 38 111 3.6E-19 T 21-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 VFU_RS03315 a808b53c6312089d9353babc4e32e8d6 233 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.966 T 21-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 VFU_RS03315 a808b53c6312089d9353babc4e32e8d6 233 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 21-04-2016 IPR018280 Ribosomal protein S3, conserved site VFU_RS03315 a808b53c6312089d9353babc4e32e8d6 233 Gene3D G3DSA:3.30.300.20 18 107 1.1E-32 T 21-04-2016 IPR015946 K homology domain-like, alpha/beta VFU_RS03315 a808b53c6312089d9353babc4e32e8d6 233 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 4.3E-42 T 21-04-2016 VFU_RS03315 a808b53c6312089d9353babc4e32e8d6 233 PANTHER PTHR11760:SF19 2 229 3.1E-147 T 21-04-2016 VFU_RS03315 a808b53c6312089d9353babc4e32e8d6 233 PANTHER PTHR11760 2 229 3.1E-147 T 21-04-2016 VFU_RS03315 a808b53c6312089d9353babc4e32e8d6 233 SUPERFAMILY SSF54821 108 206 8.76E-41 T 21-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 VFU_RS03315 a808b53c6312089d9353babc4e32e8d6 233 SUPERFAMILY SSF54814 2 106 1.62E-36 T 21-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 VFU_RS03315 a808b53c6312089d9353babc4e32e8d6 233 SMART SM00322 60 125 1.7E-7 T 21-04-2016 IPR004087 K Homology domain GO:0003676 VFU_RS03315 a808b53c6312089d9353babc4e32e8d6 233 Gene3D G3DSA:3.30.1140.32 108 207 1.9E-47 T 21-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 VFU_RS06385 1b2c3dce88f5f06d57f733aba344d8a2 336 Pfam PF11168 Protein of unknown function (DUF2955) 11 148 1.5E-11 T 21-04-2016 IPR022604 Protein of unknown function DUF2955 VFU_RS00435 cf3cd30d9cd4de6c71990eb388c6fea8 100 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 4 86 8.7E-30 T 21-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 VFU_RS00435 cf3cd30d9cd4de6c71990eb388c6fea8 100 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 96 6.7E-16 T 21-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VFU_RS00435 cf3cd30d9cd4de6c71990eb388c6fea8 100 SUPERFAMILY SSF52794 2 99 1.15E-31 T 21-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VFU_RS00435 cf3cd30d9cd4de6c71990eb388c6fea8 100 PANTHER PTHR30505 2 99 9.7E-34 T 21-04-2016 VFU_RS00435 cf3cd30d9cd4de6c71990eb388c6fea8 100 PANTHER PTHR30505:SF0 2 99 9.7E-34 T 21-04-2016 VFU_RS00435 cf3cd30d9cd4de6c71990eb388c6fea8 100 Gene3D G3DSA:3.40.50.2300 2 99 6.6E-36 T 21-04-2016 VFU_RS12610 ed4489baed67d19963b90c2a32c55a7a 422 Gene3D G3DSA:3.90.190.20 289 418 1.4E-44 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VFU_RS12610 ed4489baed67d19963b90c2a32c55a7a 422 Pfam PF08245 Mur ligase middle domain 54 194 2.7E-7 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VFU_RS12610 ed4489baed67d19963b90c2a32c55a7a 422 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 21-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 VFU_RS12610 ed4489baed67d19963b90c2a32c55a7a 422 Pfam PF02875 Mur ligase family, glutamate ligase domain 288 337 2.0E-6 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VFU_RS12610 ed4489baed67d19963b90c2a32c55a7a 422 PIRSF PIRSF001563 7 421 3.3E-107 T 21-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 VFU_RS12610 ed4489baed67d19963b90c2a32c55a7a 422 PANTHER PTHR11136:SF0 8 421 3.8E-130 T 21-04-2016 VFU_RS12610 ed4489baed67d19963b90c2a32c55a7a 422 TIGRFAM TIGR01499 folC: bifunctional protein FolC 32 415 5.9E-107 T 21-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 VFU_RS12610 ed4489baed67d19963b90c2a32c55a7a 422 PANTHER PTHR11136 8 421 3.8E-130 T 21-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 VFU_RS12610 ed4489baed67d19963b90c2a32c55a7a 422 SUPERFAMILY SSF53623 14 285 7.59E-86 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VFU_RS12610 ed4489baed67d19963b90c2a32c55a7a 422 Gene3D G3DSA:3.40.1190.10 13 286 1.8E-87 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VFU_RS12610 ed4489baed67d19963b90c2a32c55a7a 422 SUPERFAMILY SSF53244 288 417 4.27E-32 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VFU_RS10480 974036efa844fa5be6af07f467ba1427 214 Pfam PF00072 Response regulator receiver domain 4 116 1.4E-31 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS10480 974036efa844fa5be6af07f467ba1427 214 SMART SM00448 2 115 1.2E-30 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS10480 974036efa844fa5be6af07f467ba1427 214 SUPERFAMILY SSF46894 135 210 9.52E-19 T 21-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VFU_RS10480 974036efa844fa5be6af07f467ba1427 214 SUPERFAMILY SSF52172 3 132 3.7E-34 T 21-04-2016 IPR011006 CheY-like superfamily VFU_RS10480 974036efa844fa5be6af07f467ba1427 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VFU_RS10480 974036efa844fa5be6af07f467ba1427 214 Gene3D G3DSA:3.40.50.2300 2 120 3.8E-35 T 21-04-2016 VFU_RS10480 974036efa844fa5be6af07f467ba1427 214 Gene3D G3DSA:1.10.10.10 121 211 2.9E-25 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS10480 974036efa844fa5be6af07f467ba1427 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 1.3E-19 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VFU_RS10480 974036efa844fa5be6af07f467ba1427 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 2.2E-10 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VFU_RS10480 974036efa844fa5be6af07f467ba1427 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 2.2E-10 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VFU_RS10480 974036efa844fa5be6af07f467ba1427 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 2.2E-10 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VFU_RS10480 974036efa844fa5be6af07f467ba1427 214 PANTHER PTHR26402:SF506 2 214 2.8E-110 T 21-04-2016 VFU_RS10480 974036efa844fa5be6af07f467ba1427 214 SMART SM00421 146 203 8.2E-18 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VFU_RS10480 974036efa844fa5be6af07f467ba1427 214 PANTHER PTHR26402 2 214 2.8E-110 T 21-04-2016 VFU_RS16355 f99c00576f2a333954f92d681a55a76c 295 PANTHER PTHR30097:SF3 8 293 9.2E-64 T 21-04-2016 VFU_RS16355 f99c00576f2a333954f92d681a55a76c 295 SUPERFAMILY SSF111369 96 293 2.35E-16 T 21-04-2016 VFU_RS16355 f99c00576f2a333954f92d681a55a76c 295 PANTHER PTHR30097 8 293 9.2E-64 T 21-04-2016 VFU_RS16355 f99c00576f2a333954f92d681a55a76c 295 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 80 288 3.5E-77 T 21-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VFU_RS16355 f99c00576f2a333954f92d681a55a76c 295 Gene3D G3DSA:2.40.50.100 182 213 1.8E-11 T 21-04-2016 VFU_RS16355 f99c00576f2a333954f92d681a55a76c 295 Gene3D G3DSA:2.40.50.100 99 131 1.8E-11 T 21-04-2016 VFU_RS03980 189ac48507fa45096871bbd1cad76373 177 Pfam PF01569 PAP2 superfamily 62 175 1.1E-19 T 21-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VFU_RS03980 189ac48507fa45096871bbd1cad76373 177 SMART SM00014 61 170 7.2E-13 T 21-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VFU_RS03980 189ac48507fa45096871bbd1cad76373 177 Gene3D G3DSA:1.20.144.10 6 174 1.5E-40 T 21-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VFU_RS03980 189ac48507fa45096871bbd1cad76373 177 PANTHER PTHR14969 16 176 5.8E-29 T 21-04-2016 VFU_RS03980 189ac48507fa45096871bbd1cad76373 177 SUPERFAMILY SSF48317 6 173 1.14E-36 T 21-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VFU_RS11250 737e019d81b475eea848765dbfe52e53 760 Gene3D G3DSA:1.10.540.10 63 171 2.2E-26 T 21-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 VFU_RS11250 737e019d81b475eea848765dbfe52e53 760 Gene3D G3DSA:1.20.140.10 291 448 2.8E-21 T 21-04-2016 VFU_RS11250 737e019d81b475eea848765dbfe52e53 760 PANTHER PTHR10909 32 474 2.0E-242 T 21-04-2016 VFU_RS11250 737e019d81b475eea848765dbfe52e53 760 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 67 173 3.0E-14 T 21-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 VFU_RS11250 737e019d81b475eea848765dbfe52e53 760 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 178 277 2.0E-9 T 21-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 VFU_RS11250 737e019d81b475eea848765dbfe52e53 760 SUPERFAMILY SSF56645 61 296 1.7E-45 T 21-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 VFU_RS11250 737e019d81b475eea848765dbfe52e53 760 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 301 447 5.8E-9 T 21-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VFU_RS11250 737e019d81b475eea848765dbfe52e53 760 Gene3D G3DSA:2.40.110.10 178 290 1.9E-18 T 21-04-2016 VFU_RS11250 737e019d81b475eea848765dbfe52e53 760 SUPERFAMILY SSF47203 301 453 1.61E-20 T 21-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VFU_RS11250 737e019d81b475eea848765dbfe52e53 760 PANTHER PTHR10909:SF283 32 474 2.0E-242 T 21-04-2016 VFU_RS11250 737e019d81b475eea848765dbfe52e53 760 Pfam PF09317 Domain of unknown function (DUF1974) 455 739 5.1E-112 T 21-04-2016 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.-|UniPathway: UPA00659 VFU_RS01515 da05cd1dd2f9c809266cb8c82dcd920c 507 Gene3D G3DSA:3.40.50.300 187 386 1.2E-48 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS01515 da05cd1dd2f9c809266cb8c82dcd920c 507 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 493 1.4E-211 T 21-04-2016 IPR004482 Mg chelatase-related protein VFU_RS01515 da05cd1dd2f9c809266cb8c82dcd920c 507 SUPERFAMILY SSF54211 2 169 9.86E-32 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VFU_RS01515 da05cd1dd2f9c809266cb8c82dcd920c 507 SMART SM00382 210 390 2.0E-6 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS01515 da05cd1dd2f9c809266cb8c82dcd920c 507 SUPERFAMILY SSF52540 187 501 3.3E-46 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS01515 da05cd1dd2f9c809266cb8c82dcd920c 507 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 493 3.7E-30 T 21-04-2016 IPR025158 Mg chelatase-related protein, C-terminal domain VFU_RS01515 da05cd1dd2f9c809266cb8c82dcd920c 507 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 1.8E-48 T 21-04-2016 VFU_RS01515 da05cd1dd2f9c809266cb8c82dcd920c 507 PANTHER PTHR32039 1 502 1.1E-264 T 21-04-2016 VFU_RS01515 da05cd1dd2f9c809266cb8c82dcd920c 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 7.6E-5 T 21-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 VFU_RS01515 da05cd1dd2f9c809266cb8c82dcd920c 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 317 330 7.6E-5 T 21-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 VFU_RS01515 da05cd1dd2f9c809266cb8c82dcd920c 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 289 303 7.6E-5 T 21-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 VFU_RS01515 da05cd1dd2f9c809266cb8c82dcd920c 507 Gene3D G3DSA:3.30.230.10 5 152 1.6E-28 T 21-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VFU_RS01515 da05cd1dd2f9c809266cb8c82dcd920c 507 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 391 3.3E-91 T 21-04-2016 IPR000523 Magnesium chelatase ChlI domain VFU_RS01515 da05cd1dd2f9c809266cb8c82dcd920c 507 PANTHER PTHR32039:SF7 1 502 1.1E-264 T 21-04-2016 IPR004482 Mg chelatase-related protein VFU_RS12960 58304e656ce95b9fa6ec615c6af2d20e 447 SUPERFAMILY SSF103473 13 430 3.27E-81 T 21-04-2016 IPR020846 Major facilitator superfamily domain VFU_RS12960 58304e656ce95b9fa6ec615c6af2d20e 447 Pfam PF07690 Major Facilitator Superfamily 35 395 3.6E-49 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VFU_RS12960 58304e656ce95b9fa6ec615c6af2d20e 447 PANTHER PTHR11662:SF286 12 433 1.7E-214 T 21-04-2016 VFU_RS12960 58304e656ce95b9fa6ec615c6af2d20e 447 PIRSF PIRSF002808 6 445 3.0E-147 T 21-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 VFU_RS12960 58304e656ce95b9fa6ec615c6af2d20e 447 Gene3D G3DSA:1.20.1250.20 242 432 8.1E-41 T 21-04-2016 VFU_RS12960 58304e656ce95b9fa6ec615c6af2d20e 447 Gene3D G3DSA:1.20.1250.20 22 219 4.5E-54 T 21-04-2016 VFU_RS12960 58304e656ce95b9fa6ec615c6af2d20e 447 PANTHER PTHR11662 12 433 1.7E-214 T 21-04-2016 VFU_RS12960 58304e656ce95b9fa6ec615c6af2d20e 447 ProSitePatterns PS00942 glpT family of transporters signature. 150 166 - T 21-04-2016 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 VFU_RS12960 58304e656ce95b9fa6ec615c6af2d20e 447 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 412 6.4E-139 T 21-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 VFU_RS04670 20baacc7471bd2723af21a7ce004d12a 681 Pfam PF00990 Diguanylate cyclase, GGDEF domain 254 406 4.1E-43 T 21-04-2016 IPR000160 GGDEF domain VFU_RS04670 20baacc7471bd2723af21a7ce004d12a 681 SUPERFAMILY SSF55785 7 115 2.66E-11 T 21-04-2016 IPR000014 PAS domain VFU_RS04670 20baacc7471bd2723af21a7ce004d12a 681 Gene3D G3DSA:3.30.450.20 122 233 7.3E-7 T 21-04-2016 VFU_RS04670 20baacc7471bd2723af21a7ce004d12a 681 SUPERFAMILY SSF141868 427 675 4.45E-85 T 21-04-2016 IPR001633 EAL domain VFU_RS04670 20baacc7471bd2723af21a7ce004d12a 681 SMART SM00091 131 198 2.6 T 21-04-2016 IPR000014 PAS domain VFU_RS04670 20baacc7471bd2723af21a7ce004d12a 681 SMART SM00091 8 74 4.3E-4 T 21-04-2016 IPR000014 PAS domain VFU_RS04670 20baacc7471bd2723af21a7ce004d12a 681 PANTHER PTHR33121:SF13 383 678 1.1E-81 T 21-04-2016 VFU_RS04670 20baacc7471bd2723af21a7ce004d12a 681 SMART SM00267 242 410 9.4E-61 T 21-04-2016 IPR000160 GGDEF domain VFU_RS04670 20baacc7471bd2723af21a7ce004d12a 681 PANTHER PTHR33121 383 678 1.1E-81 T 21-04-2016 VFU_RS04670 20baacc7471bd2723af21a7ce004d12a 681 Gene3D G3DSA:3.20.20.450 424 674 2.0E-93 T 21-04-2016 IPR001633 EAL domain VFU_RS04670 20baacc7471bd2723af21a7ce004d12a 681 SMART SM00052 420 666 1.5E-107 T 21-04-2016 IPR001633 EAL domain VFU_RS04670 20baacc7471bd2723af21a7ce004d12a 681 Pfam PF00563 EAL domain 427 661 5.8E-73 T 21-04-2016 IPR001633 EAL domain VFU_RS04670 20baacc7471bd2723af21a7ce004d12a 681 SUPERFAMILY SSF55073 258 412 4.63E-47 T 21-04-2016 IPR029787 Nucleotide cyclase VFU_RS04670 20baacc7471bd2723af21a7ce004d12a 681 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 8 120 2.4E-10 T 21-04-2016 IPR000014 PAS domain VFU_RS04670 20baacc7471bd2723af21a7ce004d12a 681 Gene3D G3DSA:3.30.70.270 255 418 2.1E-52 T 21-04-2016 VFU_RS04670 20baacc7471bd2723af21a7ce004d12a 681 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 254 407 3.5E-37 T 21-04-2016 IPR000160 GGDEF domain VFU_RS04670 20baacc7471bd2723af21a7ce004d12a 681 Pfam PF08448 PAS fold 15 119 2.8E-9 T 21-04-2016 IPR013656 PAS fold-4 VFU_RS04670 20baacc7471bd2723af21a7ce004d12a 681 Gene3D G3DSA:3.30.450.20 16 115 6.3E-12 T 21-04-2016 VFU_RS04670 20baacc7471bd2723af21a7ce004d12a 681 SUPERFAMILY SSF55785 115 190 3.43E-6 T 21-04-2016 IPR000014 PAS domain VFU_RS04670 20baacc7471bd2723af21a7ce004d12a 681 Pfam PF13188 PAS domain 132 177 6.6E-5 T 21-04-2016 IPR000014 PAS domain VFU_RS06610 abb5b9de20c0b7d838309fdcde1da695 478 PANTHER PTHR35369 1 478 1.0E-65 T 21-04-2016 VFU_RS06610 abb5b9de20c0b7d838309fdcde1da695 478 Pfam PF00817 impB/mucB/samB family 27 149 1.6E-6 T 21-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS06610 abb5b9de20c0b7d838309fdcde1da695 478 PANTHER PTHR35369:SF2 1 478 1.0E-65 T 21-04-2016 VFU_RS06610 abb5b9de20c0b7d838309fdcde1da695 478 SUPERFAMILY SSF56672 26 230 1.93E-29 T 21-04-2016 VFU_RS11245 666ee0fe8a30ba6e5618badea9c0b0ee 400 Gene3D G3DSA:3.40.50.720 40 151 1.7E-6 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS11245 666ee0fe8a30ba6e5618badea9c0b0ee 400 Gene3D G3DSA:3.40.50.720 184 281 1.7E-6 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS11245 666ee0fe8a30ba6e5618badea9c0b0ee 400 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 395 56.803 T 21-04-2016 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 VFU_RS11245 666ee0fe8a30ba6e5618badea9c0b0ee 400 PANTHER PTHR37480 2 400 1.0E-256 T 21-04-2016 VFU_RS11245 666ee0fe8a30ba6e5618badea9c0b0ee 400 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 1.8E-110 T 21-04-2016 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 VFU_RS11245 666ee0fe8a30ba6e5618badea9c0b0ee 400 Pfam PF07055 Enoyl reductase FAD binding domain 326 389 1.3E-31 T 21-04-2016 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 VFU_RS11245 666ee0fe8a30ba6e5618badea9c0b0ee 400 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 79 2.7E-37 T 21-04-2016 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 VFU_RS09410 de123be5e4591c462a2c90d36de12a70 57 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 52 7.0E-22 T 21-04-2016 IPR007040 Ribosome modulation factor VFU_RS09410 de123be5e4591c462a2c90d36de12a70 57 Gene3D G3DSA:1.10.10.620 1 56 7.4E-28 T 21-04-2016 IPR023200 Ribosome modulation factor-like domain VFU_RS09410 de123be5e4591c462a2c90d36de12a70 57 Pfam PF04957 Ribosome modulation factor 1 54 8.9E-29 T 21-04-2016 IPR007040 Ribosome modulation factor VFU_RS09410 de123be5e4591c462a2c90d36de12a70 57 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 30.031 T 21-04-2016 IPR007040 Ribosome modulation factor VFU_RS03455 80cfb57212529e976c42b36ee330b84f 292 SUPERFAMILY SSF53790 36 281 1.57E-78 T 21-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 VFU_RS03455 80cfb57212529e976c42b36ee330b84f 292 Gene3D G3DSA:3.40.1010.10 39 155 8.6E-46 T 21-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 VFU_RS03455 80cfb57212529e976c42b36ee330b84f 292 PANTHER PTHR21091:SF16 32 270 1.4E-79 T 21-04-2016 VFU_RS03455 80cfb57212529e976c42b36ee330b84f 292 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 42 251 3.4E-46 T 21-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 VFU_RS03455 80cfb57212529e976c42b36ee330b84f 292 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 120 153 - T 21-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 VFU_RS03455 80cfb57212529e976c42b36ee330b84f 292 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 40 272 8.0E-92 T 21-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 VFU_RS03455 80cfb57212529e976c42b36ee330b84f 292 PANTHER PTHR21091 32 270 1.4E-79 T 21-04-2016 VFU_RS03455 80cfb57212529e976c42b36ee330b84f 292 Gene3D G3DSA:3.30.950.10 156 282 6.4E-48 T 21-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 VFU_RS03455 80cfb57212529e976c42b36ee330b84f 292 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 45 59 - T 21-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 VFU_RS03385 756d9a7dbdd6c76983597e7873ac5986 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 21-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS03385 756d9a7dbdd6c76983597e7873ac5986 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 4.0E-23 T 21-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS03385 756d9a7dbdd6c76983597e7873ac5986 37 Pfam PF00444 Ribosomal protein L36 1 37 8.8E-19 T 21-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS03385 756d9a7dbdd6c76983597e7873ac5986 37 SUPERFAMILY SSF57840 1 37 1.02E-16 T 21-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS03385 756d9a7dbdd6c76983597e7873ac5986 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.137 T 21-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS03385 756d9a7dbdd6c76983597e7873ac5986 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 3.0E-9 T 21-04-2016 VFU_RS03385 756d9a7dbdd6c76983597e7873ac5986 37 PANTHER PTHR18804 1 37 3.4E-18 T 21-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS01590 d05b3c15645f03fc4fe151f0f99a2917 688 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 686 25.875 T 21-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VFU_RS01590 d05b3c15645f03fc4fe151f0f99a2917 688 SUPERFAMILY SSF109604 346 489 3.66E-13 T 21-04-2016 VFU_RS01590 d05b3c15645f03fc4fe151f0f99a2917 688 Gene3D G3DSA:1.10.730.10 582 676 8.8E-7 T 21-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VFU_RS01590 d05b3c15645f03fc4fe151f0f99a2917 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 245 260 8.8E-37 T 21-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VFU_RS01590 d05b3c15645f03fc4fe151f0f99a2917 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 49 61 8.8E-37 T 21-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VFU_RS01590 d05b3c15645f03fc4fe151f0f99a2917 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 8.8E-37 T 21-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VFU_RS01590 d05b3c15645f03fc4fe151f0f99a2917 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 8.8E-37 T 21-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VFU_RS01590 d05b3c15645f03fc4fe151f0f99a2917 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 317 333 8.8E-37 T 21-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VFU_RS01590 d05b3c15645f03fc4fe151f0f99a2917 688 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 549 3.5E-204 T 21-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VFU_RS01590 d05b3c15645f03fc4fe151f0f99a2917 688 Pfam PF05746 DALR anticodon binding domain 580 677 6.2E-10 T 21-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 VFU_RS01590 d05b3c15645f03fc4fe151f0f99a2917 688 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 687 1.2E-299 T 21-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VFU_RS01590 d05b3c15645f03fc4fe151f0f99a2917 688 PANTHER PTHR30075 1 688 0.0 T 21-04-2016 VFU_RS01590 d05b3c15645f03fc4fe151f0f99a2917 688 SMART SM00836 583 686 0.0019 T 21-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 VFU_RS12605 43496a3c509f22d424024e602ead455c 185 Pfam PF05036 Sporulation related domain 109 175 1.5E-11 T 21-04-2016 IPR007730 Sporulation-related domain GO:0042834 VFU_RS12605 43496a3c509f22d424024e602ead455c 185 PANTHER PTHR38687 2 185 1.2E-49 T 21-04-2016 VFU_RS12605 43496a3c509f22d424024e602ead455c 185 PANTHER PTHR38687:SF1 2 185 1.2E-49 T 21-04-2016 VFU_RS12605 43496a3c509f22d424024e602ead455c 185 Gene3D G3DSA:3.30.70.1070 104 182 1.1E-20 T 21-04-2016 IPR007730 Sporulation-related domain GO:0042834 VFU_RS12605 43496a3c509f22d424024e602ead455c 185 SUPERFAMILY SSF110997 108 181 7.85E-15 T 21-04-2016 IPR007730 Sporulation-related domain GO:0042834 VFU_RS04085 cfa378d36a88e740141ddfa20086ebee 322 PANTHER PTHR38782 2 318 1.3E-125 T 21-04-2016 VFU_RS04085 cfa378d36a88e740141ddfa20086ebee 322 Gene3D G3DSA:2.50.20.10 121 185 1.4E-8 T 21-04-2016 VFU_RS04085 cfa378d36a88e740141ddfa20086ebee 322 Pfam PF17188 MucB/RseB C-terminal domain 219 312 2.6E-26 T 21-04-2016 IPR033436 MucB/RseB, C-terminal VFU_RS04085 cfa378d36a88e740141ddfa20086ebee 322 PANTHER PTHR38782:SF1 2 318 1.3E-125 T 21-04-2016 VFU_RS04085 cfa378d36a88e740141ddfa20086ebee 322 Pfam PF03888 MucB/RseB N-terminal domain 25 195 1.2E-58 T 21-04-2016 IPR033434 MucB/RseB, N-terminal VFU_RS04085 cfa378d36a88e740141ddfa20086ebee 322 PIRSF PIRSF005427 1 319 3.5E-81 T 21-04-2016 IPR005588 MucB/RseB VFU_RS01395 895d96da3f78b57832cf48f519243949 182 Gene3D G3DSA:2.160.10.10 4 174 1.8E-42 T 21-04-2016 VFU_RS01395 895d96da3f78b57832cf48f519243949 182 PANTHER PTHR13061 1 169 8.9E-71 T 21-04-2016 VFU_RS01395 895d96da3f78b57832cf48f519243949 182 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 40 0.0011 T 21-04-2016 IPR001451 Hexapeptide repeat VFU_RS01395 895d96da3f78b57832cf48f519243949 182 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 96 129 5.6E-7 T 21-04-2016 IPR001451 Hexapeptide repeat VFU_RS01395 895d96da3f78b57832cf48f519243949 182 SUPERFAMILY SSF51161 4 171 9.84E-43 T 21-04-2016 IPR011004 Trimeric LpxA-like VFU_RS06900 145c67ff3436c3b22193fcb1b9bf2611 242 PRINTS PR00046 Major sigma-70 factor signature 193 205 1.52E-5 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS06900 145c67ff3436c3b22193fcb1b9bf2611 242 PRINTS PR00046 Major sigma-70 factor signature 210 225 1.52E-5 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS06900 145c67ff3436c3b22193fcb1b9bf2611 242 PRINTS PR00046 Major sigma-70 factor signature 225 236 1.52E-5 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS06900 145c67ff3436c3b22193fcb1b9bf2611 242 PRINTS PR00046 Major sigma-70 factor signature 55 68 1.52E-5 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS06900 145c67ff3436c3b22193fcb1b9bf2611 242 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 28 240 4.5E-74 T 21-04-2016 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VFU_RS06900 145c67ff3436c3b22193fcb1b9bf2611 242 Gene3D G3DSA:1.10.10.10 180 241 1.6E-8 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS06900 145c67ff3436c3b22193fcb1b9bf2611 242 Pfam PF04542 Sigma-70 region 2 28 101 1.1E-9 T 21-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS06900 145c67ff3436c3b22193fcb1b9bf2611 242 Pfam PF04545 Sigma-70, region 4 191 236 1.0E-8 T 21-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS06900 145c67ff3436c3b22193fcb1b9bf2611 242 SUPERFAMILY SSF88659 161 241 6.92E-15 T 21-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS06900 145c67ff3436c3b22193fcb1b9bf2611 242 PANTHER PTHR30385 25 240 6.4E-38 T 21-04-2016 VFU_RS06900 145c67ff3436c3b22193fcb1b9bf2611 242 SUPERFAMILY SSF88946 23 100 1.75E-17 T 21-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS06900 145c67ff3436c3b22193fcb1b9bf2611 242 PANTHER PTHR30385:SF7 25 240 6.4E-38 T 21-04-2016 VFU_RS06900 145c67ff3436c3b22193fcb1b9bf2611 242 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 210 236 - T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS06900 145c67ff3436c3b22193fcb1b9bf2611 242 Gene3D G3DSA:1.10.10.10 102 149 1.5E-6 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS06900 145c67ff3436c3b22193fcb1b9bf2611 242 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 240 1.1E-24 T 21-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS06900 145c67ff3436c3b22193fcb1b9bf2611 242 SUPERFAMILY SSF88659 102 164 4.8E-11 T 21-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VFU_RS13140 85955cc6e4c449920122523bfc665c3a 85 PANTHER PTHR33280 1 80 4.9E-36 T 21-04-2016 VFU_RS13140 85955cc6e4c449920122523bfc665c3a 85 Pfam PF01197 Ribosomal protein L31 1 77 9.6E-25 T 21-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS13140 85955cc6e4c449920122523bfc665c3a 85 SUPERFAMILY SSF143800 1 80 1.49E-20 T 21-04-2016 VFU_RS13140 85955cc6e4c449920122523bfc665c3a 85 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 3.1E-17 T 21-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS13140 85955cc6e4c449920122523bfc665c3a 85 PANTHER PTHR33280:SF3 1 80 4.9E-36 T 21-04-2016 VFU_RS13140 85955cc6e4c449920122523bfc665c3a 85 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 25.923 T 21-04-2016 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS13140 85955cc6e4c449920122523bfc665c3a 85 PRINTS PR01249 Ribosomal protein L31 signature 2 19 9.7E-15 T 21-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS13140 85955cc6e4c449920122523bfc665c3a 85 PRINTS PR01249 Ribosomal protein L31 signature 59 77 9.7E-15 T 21-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS13140 85955cc6e4c449920122523bfc665c3a 85 PRINTS PR01249 Ribosomal protein L31 signature 44 59 9.7E-15 T 21-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS02570 e17257ff1fb8e0f21dd93a0d32eebefa 296 Gene3D G3DSA:2.30.42.10 239 293 3.5E-6 T 21-04-2016 IPR001478 PDZ domain GO:0005515 VFU_RS02570 e17257ff1fb8e0f21dd93a0d32eebefa 296 Pfam PF11356 Type II secretion system protein C 32 169 2.4E-44 T 21-04-2016 IPR024961 Type II secretion system protein C, N-terminal VFU_RS02570 e17257ff1fb8e0f21dd93a0d32eebefa 296 SUPERFAMILY SSF50156 204 295 8.02E-17 T 21-04-2016 IPR001478 PDZ domain GO:0005515 VFU_RS02570 e17257ff1fb8e0f21dd93a0d32eebefa 296 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 30 296 7.4E-81 T 21-04-2016 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 VFU_RS13475 f8ca76e758cbd2795d097708fddce4db 204 Pfam PF09976 Tetratricopeptide repeat-like domain 15 204 3.0E-55 T 21-04-2016 IPR018704 Tetratricopeptide repeat-like domain VFU_RS13475 f8ca76e758cbd2795d097708fddce4db 204 Gene3D G3DSA:1.25.40.10 51 190 3.8E-6 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VFU_RS13475 f8ca76e758cbd2795d097708fddce4db 204 PANTHER PTHR38035 2 204 5.3E-80 T 21-04-2016 VFU_RS13475 f8ca76e758cbd2795d097708fddce4db 204 PIRSF PIRSF006170 1 204 2.9E-53 T 21-04-2016 IPR026039 Uncharacterised protein family UPF0070 VFU_RS13475 f8ca76e758cbd2795d097708fddce4db 204 SUPERFAMILY SSF48452 90 189 8.13E-7 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VFU_RS09110 2501ea66c2d267e97ad4d27eb279c8e9 245 SMART SM01144 27 221 7.3E-62 T 21-04-2016 IPR005636 DTW VFU_RS09110 2501ea66c2d267e97ad4d27eb279c8e9 245 PANTHER PTHR21392:SF1 1 235 4.4E-108 T 21-04-2016 VFU_RS09110 2501ea66c2d267e97ad4d27eb279c8e9 245 PANTHER PTHR21392 1 235 4.4E-108 T 21-04-2016 VFU_RS09110 2501ea66c2d267e97ad4d27eb279c8e9 245 Pfam PF03942 DTW domain 29 215 9.8E-40 T 21-04-2016 IPR005636 DTW VFU_RS12145 4ebb3945c45ceb9599618e1b66f54e7b 110 Pfam PF10761 Protein of unknown function (DUF2590) 8 105 5.7E-41 T 21-04-2016 IPR019697 Bacteriophage HP1, Orf28 VFU_RS02445 c70b8b8720fdc309dcf5f1d35c9a232b 608 SUPERFAMILY SSF56935 29 608 3.92E-108 T 21-04-2016 VFU_RS02445 c70b8b8720fdc309dcf5f1d35c9a232b 608 Pfam PF00593 TonB dependent receptor 387 607 1.0E-24 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 VFU_RS02445 c70b8b8720fdc309dcf5f1d35c9a232b 608 Gene3D G3DSA:2.170.130.10 22 154 3.6E-41 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 VFU_RS02445 c70b8b8720fdc309dcf5f1d35c9a232b 608 PANTHER PTHR30069 19 606 4.0E-109 T 21-04-2016 VFU_RS02445 c70b8b8720fdc309dcf5f1d35c9a232b 608 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 147 4.2E-29 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 VFU_RS02445 c70b8b8720fdc309dcf5f1d35c9a232b 608 PANTHER PTHR30069:SF10 19 606 4.0E-109 T 21-04-2016 VFU_RS02445 c70b8b8720fdc309dcf5f1d35c9a232b 608 Gene3D G3DSA:2.40.170.20 161 608 1.7E-72 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 VFU_RS02445 c70b8b8720fdc309dcf5f1d35c9a232b 608 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 1 608 34.782 T 21-04-2016 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 VFU_RS02445 c70b8b8720fdc309dcf5f1d35c9a232b 608 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 36 - T 21-04-2016 IPR010916 TonB box, conserved site VFU_RS00910 78f5b7e4228f7e171f8788d575794585 147 PANTHER PTHR38978 2 147 3.1E-78 T 21-04-2016 VFU_RS00910 78f5b7e4228f7e171f8788d575794585 147 PANTHER PTHR38978:SF2 2 147 3.1E-78 T 21-04-2016 VFU_RS00910 78f5b7e4228f7e171f8788d575794585 147 Pfam PF10980 Protein of unknown function (DUF2787) 15 145 7.3E-50 T 21-04-2016 IPR021248 Protein of unknown function DUF2787 VFU_RS07605 d75ec985206ac67c8cf06470b4bb38d8 150 Pfam PF04217 Protein of unknown function, DUF412 10 146 3.7E-58 T 21-04-2016 IPR007334 Uncharacterised protein family UPF0208 VFU_RS07605 d75ec985206ac67c8cf06470b4bb38d8 150 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 5 150 35.628 T 21-04-2016 IPR007334 Uncharacterised protein family UPF0208 VFU_RS13335 515d53835b8dd4985bb35b18a21141c7 347 Pfam PF00419 Fimbrial protein 205 346 2.5E-6 T 21-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 VFU_RS13335 515d53835b8dd4985bb35b18a21141c7 347 Gene3D G3DSA:2.60.40.1090 209 346 7.0E-9 T 21-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 VFU_RS13335 515d53835b8dd4985bb35b18a21141c7 347 SUPERFAMILY SSF49401 207 346 8.95E-10 T 21-04-2016 IPR008966 Adhesion domain VFU_RS06160 39cd034f3c302e0319528b829734dfa4 260 Pfam PF00950 ABC 3 transport family 1 257 1.1E-76 T 21-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 VFU_RS06160 39cd034f3c302e0319528b829734dfa4 260 PANTHER PTHR30477:SF0 3 259 3.1E-82 T 21-04-2016 VFU_RS06160 39cd034f3c302e0319528b829734dfa4 260 Gene3D G3DSA:1.10.3470.10 51 233 5.7E-9 T 21-04-2016 IPR029022 ABC transporter, BtuC-like VFU_RS06160 39cd034f3c302e0319528b829734dfa4 260 SUPERFAMILY SSF81345 2 253 1.44E-38 T 21-04-2016 IPR029022 ABC transporter, BtuC-like VFU_RS06160 39cd034f3c302e0319528b829734dfa4 260 PANTHER PTHR30477 3 259 3.1E-82 T 21-04-2016 VFU_RS12480 131ada34741e605b8065fda2d4e6c1d0 151 PANTHER PTHR23404 16 151 5.3E-47 T 21-04-2016 VFU_RS12480 131ada34741e605b8065fda2d4e6c1d0 151 Gene3D G3DSA:3.90.1170.40 3 149 5.6E-59 T 21-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 VFU_RS12480 131ada34741e605b8065fda2d4e6c1d0 151 PANTHER PTHR23404:SF2 16 151 5.3E-47 T 21-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 VFU_RS12480 131ada34741e605b8065fda2d4e6c1d0 151 SUPERFAMILY SSF54690 4 149 3.27E-55 T 21-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 VFU_RS12480 131ada34741e605b8065fda2d4e6c1d0 151 Pfam PF02391 MoaE protein 7 120 1.2E-38 T 21-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 VFU_RS14220 9ed4d580272154fe7ae926d5f0fa6595 260 Pfam PF03799 Cell division protein FtsQ 126 238 3.5E-24 T 21-04-2016 IPR005548 Cell division protein FtsQ/DivIB VFU_RS14220 9ed4d580272154fe7ae926d5f0fa6595 260 Pfam PF08478 POTRA domain, FtsQ-type 53 122 2.2E-17 T 21-04-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type VFU_RS14220 9ed4d580272154fe7ae926d5f0fa6595 260 PANTHER PTHR35851 2 260 3.2E-67 T 21-04-2016 VFU_RS14220 9ed4d580272154fe7ae926d5f0fa6595 260 PANTHER PTHR35851:SF1 2 260 3.2E-67 T 21-04-2016 VFU_RS14220 9ed4d580272154fe7ae926d5f0fa6595 260 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 22 246 22.625 T 21-04-2016 IPR026579 Cell division protein FtsQ GO:0000917 VFU_RS11190 8ba2d40e9c37ed676d1480ff0ab2547f 165 Gene3D G3DSA:3.40.50.2300 5 132 4.3E-19 T 21-04-2016 VFU_RS11190 8ba2d40e9c37ed676d1480ff0ab2547f 165 PANTHER PTHR26402 4 129 6.6E-28 T 21-04-2016 VFU_RS11190 8ba2d40e9c37ed676d1480ff0ab2547f 165 SUPERFAMILY SSF52172 1 137 6.4E-19 T 21-04-2016 IPR011006 CheY-like superfamily VFU_RS11190 8ba2d40e9c37ed676d1480ff0ab2547f 165 PANTHER PTHR26402:SF515 4 129 6.6E-28 T 21-04-2016 VFU_RS11190 8ba2d40e9c37ed676d1480ff0ab2547f 165 SMART SM00448 4 125 4.0E-8 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS11190 8ba2d40e9c37ed676d1480ff0ab2547f 165 Pfam PF00072 Response regulator receiver domain 6 125 8.0E-13 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS00830 872bce6b4df72eebfcb19fc4e5a2b8f9 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 21-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS00830 872bce6b4df72eebfcb19fc4e5a2b8f9 55 Pfam PF00471 Ribosomal protein L33 7 53 1.1E-16 T 21-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS00830 872bce6b4df72eebfcb19fc4e5a2b8f9 55 PANTHER PTHR15238 1 55 2.0E-24 T 21-04-2016 VFU_RS00830 872bce6b4df72eebfcb19fc4e5a2b8f9 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 3.2E-25 T 21-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS00830 872bce6b4df72eebfcb19fc4e5a2b8f9 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 14.671 T 21-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS00830 872bce6b4df72eebfcb19fc4e5a2b8f9 55 SUPERFAMILY SSF57829 1 53 6.1E-19 T 21-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 VFU_RS10080 9198adb3cf23996e2e8976779613e9b4 227 SMART SM00448 3 116 1.9E-26 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS10080 9198adb3cf23996e2e8976779613e9b4 227 PIRSF PIRSF006171 1 227 2.9E-81 T 21-04-2016 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0001071|GO:0003677|GO:0005737|GO:0009605 VFU_RS10080 9198adb3cf23996e2e8976779613e9b4 227 PANTHER PTHR26402 3 134 4.8E-46 T 21-04-2016 VFU_RS10080 9198adb3cf23996e2e8976779613e9b4 227 PANTHER PTHR26402 202 219 4.8E-46 T 21-04-2016 VFU_RS10080 9198adb3cf23996e2e8976779613e9b4 227 SUPERFAMILY SSF52172 3 131 4.84E-32 T 21-04-2016 IPR011006 CheY-like superfamily VFU_RS10080 9198adb3cf23996e2e8976779613e9b4 227 PANTHER PTHR26402:SF522 3 134 4.8E-46 T 21-04-2016 VFU_RS10080 9198adb3cf23996e2e8976779613e9b4 227 PANTHER PTHR26402:SF522 202 219 4.8E-46 T 21-04-2016 VFU_RS10080 9198adb3cf23996e2e8976779613e9b4 227 Pfam PF00072 Response regulator receiver domain 5 116 9.3E-22 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VFU_RS10080 9198adb3cf23996e2e8976779613e9b4 227 Pfam PF12431 Transcriptional regulator 132 160 3.8E-7 T 21-04-2016 IPR028141 Transcriptional regulator VFU_RS10080 9198adb3cf23996e2e8976779613e9b4 227 Gene3D G3DSA:3.40.50.2300 3 123 6.9E-28 T 21-04-2016 VFU_RS13835 731ccbc92b21f5450b59fcc8b921dc49 363 Pfam PF14378 PAP2 superfamily 143 349 3.8E-29 T 21-04-2016 IPR026841 Inositolphosphotransferase Aur1/Ipt1 VFU_RS09775 5cb18c68acb3bbc54dc212164e7ac3f9 363 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 5 174 1.9E-66 T 21-04-2016 IPR005126 NapC/NirT cytochrome c, N-terminal VFU_RS09775 5cb18c68acb3bbc54dc212164e7ac3f9 363 SUPERFAMILY SSF48695 9 179 3.03E-49 T 21-04-2016 IPR011031 Multihaem cytochrome VFU_RS09775 5cb18c68acb3bbc54dc212164e7ac3f9 363 PANTHER PTHR30333:SF3 1 363 1.9E-186 T 21-04-2016 VFU_RS09775 5cb18c68acb3bbc54dc212164e7ac3f9 363 PIRSF PIRSF000014 1 363 7.1E-145 T 21-04-2016 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 VFU_RS09775 5cb18c68acb3bbc54dc212164e7ac3f9 363 Gene3D G3DSA:1.10.3820.10 5 176 6.5E-28 T 21-04-2016 VFU_RS09775 5cb18c68acb3bbc54dc212164e7ac3f9 363 Gene3D G3DSA:1.10.3820.10 311 317 6.5E-28 T 21-04-2016 VFU_RS09775 5cb18c68acb3bbc54dc212164e7ac3f9 363 PANTHER PTHR30333 1 363 1.9E-186 T 21-04-2016 VFU_RS05200 54d1175b070cb2b63b888a562a2f8ea9 369 Gene3D G3DSA:3.40.140.10 8 133 7.8E-31 T 21-04-2016 VFU_RS05200 54d1175b070cb2b63b888a562a2f8ea9 369 PANTHER PTHR11079:SF10 296 320 3.0E-63 T 21-04-2016 VFU_RS05200 54d1175b070cb2b63b888a562a2f8ea9 369 PANTHER PTHR11079:SF10 8 217 3.0E-63 T 21-04-2016 VFU_RS05200 54d1175b070cb2b63b888a562a2f8ea9 369 Gene3D G3DSA:3.40.430.10 134 362 1.9E-61 T 21-04-2016 IPR024072 Dihydrofolate reductase-like domain VFU_RS05200 54d1175b070cb2b63b888a562a2f8ea9 369 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 12 359 4.4E-126 T 21-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 VFU_RS05200 54d1175b070cb2b63b888a562a2f8ea9 369 SUPERFAMILY SSF53927 8 150 4.14E-45 T 21-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 VFU_RS05200 54d1175b070cb2b63b888a562a2f8ea9 369 Pfam PF01872 RibD C-terminal domain 152 358 1.1E-48 T 21-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 VFU_RS05200 54d1175b070cb2b63b888a562a2f8ea9 369 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 55 93 - T 21-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VFU_RS05200 54d1175b070cb2b63b888a562a2f8ea9 369 SUPERFAMILY SSF53597 149 360 3.56E-53 T 21-04-2016 IPR024072 Dihydrofolate reductase-like domain VFU_RS05200 54d1175b070cb2b63b888a562a2f8ea9 369 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 151 363 1.5E-55 T 21-04-2016 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 VFU_RS05200 54d1175b070cb2b63b888a562a2f8ea9 369 PANTHER PTHR11079 296 320 3.0E-63 T 21-04-2016 VFU_RS05200 54d1175b070cb2b63b888a562a2f8ea9 369 PANTHER PTHR11079 8 217 3.0E-63 T 21-04-2016 VFU_RS05200 54d1175b070cb2b63b888a562a2f8ea9 369 PIRSF PIRSF006769 4 367 5.9E-119 T 21-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 VFU_RS05200 54d1175b070cb2b63b888a562a2f8ea9 369 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 8 104 4.1E-18 T 21-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 VFU_RS01975 827cdb54422d8abd5b643e52f9a30c84 596 SUPERFAMILY SSF53092 7 129 9.77E-18 T 21-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal VFU_RS01975 827cdb54422d8abd5b643e52f9a30c84 596 Pfam PF00557 Metallopeptidase family M24 309 525 2.0E-44 T 21-04-2016 IPR000994 Peptidase M24, structural domain VFU_RS01975 827cdb54422d8abd5b643e52f9a30c84 596 Pfam PF01321 Creatinase/Prolidase N-terminal domain 8 129 1.8E-17 T 21-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 VFU_RS01975 827cdb54422d8abd5b643e52f9a30c84 596 PANTHER PTHR10804:SF105 4 180 4.8E-240 T 21-04-2016 VFU_RS01975 827cdb54422d8abd5b643e52f9a30c84 596 PANTHER PTHR10804:SF105 282 591 4.8E-240 T 21-04-2016 VFU_RS01975 827cdb54422d8abd5b643e52f9a30c84 596 Pfam PF16189 Creatinase/Prolidase N-terminal domain 148 306 3.4E-30 T 21-04-2016 VFU_RS01975 827cdb54422d8abd5b643e52f9a30c84 596 Gene3D G3DSA:3.40.350.10 5 128 9.8E-20 T 21-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VFU_RS01975 827cdb54422d8abd5b643e52f9a30c84 596 Gene3D G3DSA:3.90.230.10 301 560 8.6E-60 T 21-04-2016 IPR000994 Peptidase M24, structural domain VFU_RS01975 827cdb54422d8abd5b643e52f9a30c84 596 SUPERFAMILY SSF55920 303 559 4.45E-57 T 21-04-2016 IPR000994 Peptidase M24, structural domain VFU_RS01975 827cdb54422d8abd5b643e52f9a30c84 596 Pfam PF16188 C-terminal region of peptidase_M24 534 593 3.7E-23 T 21-04-2016 IPR032416 Peptidase M24, C-terminal domain VFU_RS01975 827cdb54422d8abd5b643e52f9a30c84 596 PANTHER PTHR10804 4 180 4.8E-240 T 21-04-2016 VFU_RS01975 827cdb54422d8abd5b643e52f9a30c84 596 PANTHER PTHR10804 282 591 4.8E-240 T 21-04-2016 VFU_RS13380 450af5dca849efeec6fa0f6b423dd8e9 448 SUPERFAMILY SSF56672 145 315 8.01E-7 T 21-04-2016 VFU_RS13380 450af5dca849efeec6fa0f6b423dd8e9 448 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 147 311 1.0E-18 T 21-04-2016 IPR000477 Reverse transcriptase domain VFU_RS13380 450af5dca849efeec6fa0f6b423dd8e9 448 Gene3D G3DSA:3.30.70.270 164 176 8.9E-4 T 21-04-2016 VFU_RS13380 450af5dca849efeec6fa0f6b423dd8e9 448 Gene3D G3DSA:3.30.70.270 216 310 8.9E-4 T 21-04-2016 VFU_RS03535 262af2bb6a64d1af6769c2b4b04f554d 115 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 5 112 2.7E-27 T 21-04-2016 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like VFU_RS03535 262af2bb6a64d1af6769c2b4b04f554d 115 SUPERFAMILY SSF110857 2 114 2.75E-32 T 21-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like VFU_RS03535 262af2bb6a64d1af6769c2b4b04f554d 115 Gene3D G3DSA:3.10.490.10 2 114 2.0E-39 T 21-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like VFU_RS03535 262af2bb6a64d1af6769c2b4b04f554d 115 PANTHER PTHR12510 1 114 9.7E-57 T 21-04-2016 VFU_RS03535 262af2bb6a64d1af6769c2b4b04f554d 115 PANTHER PTHR12510:SF6 1 114 9.7E-57 T 21-04-2016 VFU_RS09805 a703ae95b61dcbed039ab361653c7cc7 402 PANTHER PTHR30085:SF1 1 181 7.2E-169 T 21-04-2016 VFU_RS09805 a703ae95b61dcbed039ab361653c7cc7 402 PANTHER PTHR30085:SF1 260 402 7.2E-169 T 21-04-2016 VFU_RS09805 a703ae95b61dcbed039ab361653c7cc7 402 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 93 156 4.4E-17 T 21-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 VFU_RS09805 a703ae95b61dcbed039ab361653c7cc7 402 SUPERFAMILY SSF161098 92 161 9.29E-12 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS09805 a703ae95b61dcbed039ab361653c7cc7 402 SUPERFAMILY SSF161098 193 383 2.49E-25 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS09805 a703ae95b61dcbed039ab361653c7cc7 402 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 397 1.1E-10 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS09805 a703ae95b61dcbed039ab361653c7cc7 402 Gene3D G3DSA:1.10.3720.10 193 397 9.5E-36 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS09805 a703ae95b61dcbed039ab361653c7cc7 402 Gene3D G3DSA:1.10.3720.10 91 162 1.7E-13 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS09805 a703ae95b61dcbed039ab361653c7cc7 402 PANTHER PTHR30085 1 181 7.2E-169 T 21-04-2016 VFU_RS09805 a703ae95b61dcbed039ab361653c7cc7 402 PANTHER PTHR30085 260 402 7.2E-169 T 21-04-2016 VFU_RS07895 d2d05dbbb8b349ffde35f9715a76787e 72 SUPERFAMILY SSF50249 1 70 3.74E-29 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS07895 d2d05dbbb8b349ffde35f9715a76787e 72 SMART SM00316 4 72 2.0E-6 T 21-04-2016 IPR022967 RNA-binding domain, S1 VFU_RS07895 d2d05dbbb8b349ffde35f9715a76787e 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.423 T 21-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 VFU_RS07895 d2d05dbbb8b349ffde35f9715a76787e 72 PANTHER PTHR33370 1 72 2.8E-50 T 21-04-2016 VFU_RS07895 d2d05dbbb8b349ffde35f9715a76787e 72 Gene3D G3DSA:2.40.50.140 1 71 1.3E-39 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS07895 d2d05dbbb8b349ffde35f9715a76787e 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 7.3E-39 T 21-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 VFU_RS07895 d2d05dbbb8b349ffde35f9715a76787e 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.9E-28 T 21-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 VFU_RS03725 0f8cc69fb17b67f5072a14d939c59403 245 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 8 206 7.9E-58 T 21-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS03725 0f8cc69fb17b67f5072a14d939c59403 245 Pfam PF00849 RNA pseudouridylate synthase 23 169 5.7E-30 T 21-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS03725 0f8cc69fb17b67f5072a14d939c59403 245 PANTHER PTHR11079:SF86 3 237 6.1E-75 T 21-04-2016 VFU_RS03725 0f8cc69fb17b67f5072a14d939c59403 245 SUPERFAMILY SSF55120 14 221 3.84E-65 T 21-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS03725 0f8cc69fb17b67f5072a14d939c59403 245 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 60 74 - T 21-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS03725 0f8cc69fb17b67f5072a14d939c59403 245 PANTHER PTHR11079 3 237 6.1E-75 T 21-04-2016 VFU_RS05975 2037b9931a36b12238f63403c76155e9 129 Pfam PF04347 Flagellar biosynthesis protein, FliO 43 121 1.6E-18 T 21-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 VFU_RS05975 2037b9931a36b12238f63403c76155e9 129 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 31 98 1.6E-22 T 21-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 VFU_RS05975 2037b9931a36b12238f63403c76155e9 129 PANTHER PTHR38766:SF1 7 129 9.4E-32 T 21-04-2016 VFU_RS05975 2037b9931a36b12238f63403c76155e9 129 PANTHER PTHR38766 7 129 9.4E-32 T 21-04-2016 VFU_RS12945 4e6bc7f04ef9817b41ac53e2b278171b 464 Gene3D G3DSA:1.20.1250.20 30 237 1.4E-33 T 21-04-2016 VFU_RS12945 4e6bc7f04ef9817b41ac53e2b278171b 464 Gene3D G3DSA:1.20.1250.20 252 455 7.4E-29 T 21-04-2016 VFU_RS12945 4e6bc7f04ef9817b41ac53e2b278171b 464 PIRSF PIRSF002808 10 460 7.4E-106 T 21-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 VFU_RS12945 4e6bc7f04ef9817b41ac53e2b278171b 464 SUPERFAMILY SSF103473 19 450 8.5E-59 T 21-04-2016 IPR020846 Major facilitator superfamily domain VFU_RS12945 4e6bc7f04ef9817b41ac53e2b278171b 464 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 426 6.7E-138 T 21-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 VFU_RS12945 4e6bc7f04ef9817b41ac53e2b278171b 464 PANTHER PTHR11662:SF244 1 456 3.7E-261 T 21-04-2016 VFU_RS12945 4e6bc7f04ef9817b41ac53e2b278171b 464 ProSitePatterns PS00942 glpT family of transporters signature. 156 172 - T 21-04-2016 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 VFU_RS12945 4e6bc7f04ef9817b41ac53e2b278171b 464 Pfam PF07690 Major Facilitator Superfamily 35 396 3.3E-34 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VFU_RS12945 4e6bc7f04ef9817b41ac53e2b278171b 464 PANTHER PTHR11662 1 456 3.7E-261 T 21-04-2016 VFU_RS19470 8e538b7132e5557f7f14f7ce146c52ac 257 SUPERFAMILY SSF101904 10 254 7.85E-52 T 21-04-2016 VFU_RS19470 8e538b7132e5557f7f14f7ce146c52ac 257 Gene3D G3DSA:2.120.10.90 9 243 2.2E-29 T 21-04-2016 VFU_RS19470 8e538b7132e5557f7f14f7ce146c52ac 257 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 111 152 0.0013 T 21-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VFU_RS19470 8e538b7132e5557f7f14f7ce146c52ac 257 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 158 204 2.1E-9 T 21-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VFU_RS06490 aa331ac1838440c46a4c996cdaa0b77e 56 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 6.5E-20 T 21-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 VFU_RS06490 aa331ac1838440c46a4c996cdaa0b77e 56 PANTHER PTHR35534 1 56 5.2E-29 T 21-04-2016 VFU_RS06490 aa331ac1838440c46a4c996cdaa0b77e 56 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.057 T 21-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 VFU_RS06490 aa331ac1838440c46a4c996cdaa0b77e 56 Pfam PF01783 Ribosomal L32p protein family 2 56 9.9E-20 T 21-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 VFU_RS06490 aa331ac1838440c46a4c996cdaa0b77e 56 SUPERFAMILY SSF57829 2 55 2.87E-18 T 21-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 VFU_RS14695 5803b087162675c7131771abc2ca3d5f 340 Gene3D G3DSA:1.10.260.40 6 57 1.9E-21 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VFU_RS14695 5803b087162675c7131771abc2ca3d5f 340 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 65 318 1.0E-43 T 21-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain VFU_RS14695 5803b087162675c7131771abc2ca3d5f 340 PANTHER PTHR30146 5 340 5.5E-98 T 21-04-2016 VFU_RS14695 5803b087162675c7131771abc2ca3d5f 340 SUPERFAMILY SSF47413 4 63 5.89E-17 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VFU_RS14695 5803b087162675c7131771abc2ca3d5f 340 Gene3D G3DSA:3.40.50.2300 178 319 2.4E-45 T 21-04-2016 VFU_RS14695 5803b087162675c7131771abc2ca3d5f 340 SUPERFAMILY SSF53822 65 340 2.16E-64 T 21-04-2016 IPR028082 Periplasmic binding protein-like I VFU_RS14695 5803b087162675c7131771abc2ca3d5f 340 SMART SM00354 5 75 1.8E-32 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VFU_RS14695 5803b087162675c7131771abc2ca3d5f 340 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VFU_RS14695 5803b087162675c7131771abc2ca3d5f 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 52 7.5E-15 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VFU_RS14695 5803b087162675c7131771abc2ca3d5f 340 Gene3D G3DSA:3.40.50.2300 58 177 1.5E-38 T 21-04-2016 VFU_RS05940 abff3d2ccd54d3c97129636878dd7164 267 PRINTS PR01003 Flagellar assembly protein FliH signature 85 107 1.0E-5 T 21-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 VFU_RS05940 abff3d2ccd54d3c97129636878dd7164 267 PRINTS PR01003 Flagellar assembly protein FliH signature 147 164 1.0E-5 T 21-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 VFU_RS05940 abff3d2ccd54d3c97129636878dd7164 267 PRINTS PR01003 Flagellar assembly protein FliH signature 217 233 1.0E-5 T 21-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 VFU_RS05940 abff3d2ccd54d3c97129636878dd7164 267 PANTHER PTHR34982 1 267 1.4E-74 T 21-04-2016 VFU_RS05940 abff3d2ccd54d3c97129636878dd7164 267 Pfam PF02108 Flagellar assembly protein FliH 127 251 9.8E-34 T 21-04-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE VFU_RS05940 abff3d2ccd54d3c97129636878dd7164 267 PANTHER PTHR34982:SF1 1 267 1.4E-74 T 21-04-2016 VFU_RS02015 d2a01ddbe5aef67044c2c2dcb8ee4fa2 294 PANTHER PTHR22911:SF27 1 286 6.9E-64 T 21-04-2016 VFU_RS02015 d2a01ddbe5aef67044c2c2dcb8ee4fa2 294 SUPERFAMILY SSF103481 184 274 2.62E-5 T 21-04-2016 VFU_RS02015 d2a01ddbe5aef67044c2c2dcb8ee4fa2 294 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 274 1.6E-71 T 21-04-2016 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 VFU_RS02015 d2a01ddbe5aef67044c2c2dcb8ee4fa2 294 PANTHER PTHR22911 1 286 6.9E-64 T 21-04-2016 VFU_RS00745 fcf5ecf9145c3feaccff571f7fb1616d 394 PANTHER PTHR37422:SF2 151 377 1.9E-18 T 21-04-2016 VFU_RS00745 fcf5ecf9145c3feaccff571f7fb1616d 394 PANTHER PTHR37422 151 377 1.9E-18 T 21-04-2016 VFU_RS00745 fcf5ecf9145c3feaccff571f7fb1616d 394 Pfam PF04932 O-Antigen ligase 170 323 6.7E-23 T 21-04-2016 IPR007016 O-antigen ligase-related VFU_RS13905 aac8e8b86359049167fba83c29cd8a44 449 Gene3D G3DSA:3.40.50.300 153 376 1.2E-12 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS13905 aac8e8b86359049167fba83c29cd8a44 449 SMART SM00382 172 363 0.0099 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS13905 aac8e8b86359049167fba83c29cd8a44 449 SUPERFAMILY SSF52540 153 199 1.12E-18 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS13905 aac8e8b86359049167fba83c29cd8a44 449 SUPERFAMILY SSF52540 250 434 1.12E-18 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS10995 a9405b98087dabd967c3eca8716467ba 456 PANTHER PTHR30033 1 456 1.9E-53 T 21-04-2016 VFU_RS10995 a9405b98087dabd967c3eca8716467ba 456 PANTHER PTHR30033:SF1 1 456 1.9E-53 T 21-04-2016 VFU_RS10995 a9405b98087dabd967c3eca8716467ba 456 SUPERFAMILY SSF64518 131 456 3.53E-21 T 21-04-2016 VFU_RS10995 a9405b98087dabd967c3eca8716467ba 456 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 409 454 2.2E-6 T 21-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VFU_RS10995 a9405b98087dabd967c3eca8716467ba 456 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 2 454 3.0E-90 T 21-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VFU_RS01505 2a041c72432a4e5a9516d16e51df254b 203 PANTHER PTHR35891:SF2 1 201 6.8E-82 T 21-04-2016 VFU_RS01505 2a041c72432a4e5a9516d16e51df254b 203 Gene3D G3DSA:3.40.30.10 4 121 7.7E-41 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS01505 2a041c72432a4e5a9516d16e51df254b 203 Gene3D G3DSA:3.40.30.10 123 201 8.7E-22 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS01505 2a041c72432a4e5a9516d16e51df254b 203 PANTHER PTHR35891 1 201 6.8E-82 T 21-04-2016 VFU_RS01505 2a041c72432a4e5a9516d16e51df254b 203 ProSitePatterns PS00194 Thioredoxin family active site. 45 63 - T 21-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 VFU_RS01505 2a041c72432a4e5a9516d16e51df254b 203 Pfam PF01323 DSBA-like thioredoxin domain 45 191 6.3E-27 T 21-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 VFU_RS01505 2a041c72432a4e5a9516d16e51df254b 203 PIRSF PIRSF001488 5 203 5.6E-69 T 21-04-2016 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL VFU_RS01505 2a041c72432a4e5a9516d16e51df254b 203 SUPERFAMILY SSF52833 24 202 3.42E-45 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS09890 bccf4b15f0ee82dc9d2a721ba1cf0247 399 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 267 286 1.8E-20 T 21-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 VFU_RS09890 bccf4b15f0ee82dc9d2a721ba1cf0247 399 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 83 95 1.8E-20 T 21-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 VFU_RS09890 bccf4b15f0ee82dc9d2a721ba1cf0247 399 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 366 379 1.8E-20 T 21-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 VFU_RS09890 bccf4b15f0ee82dc9d2a721ba1cf0247 399 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 63 81 1.8E-20 T 21-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 VFU_RS09890 bccf4b15f0ee82dc9d2a721ba1cf0247 399 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 185 198 1.8E-20 T 21-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 VFU_RS09890 bccf4b15f0ee82dc9d2a721ba1cf0247 399 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 289 385 8.2E-24 T 21-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 VFU_RS09890 bccf4b15f0ee82dc9d2a721ba1cf0247 399 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 44 278 9.2E-54 T 21-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 VFU_RS09890 bccf4b15f0ee82dc9d2a721ba1cf0247 399 SUPERFAMILY SSF50621 259 387 1.95E-34 T 21-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 VFU_RS09890 bccf4b15f0ee82dc9d2a721ba1cf0247 399 Gene3D G3DSA:2.40.37.10 266 388 4.8E-38 T 21-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 VFU_RS09890 bccf4b15f0ee82dc9d2a721ba1cf0247 399 PRINTS PR01182 Ornithine decarboxylase signature 105 129 1.5E-17 T 21-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 VFU_RS09890 bccf4b15f0ee82dc9d2a721ba1cf0247 399 PRINTS PR01182 Ornithine decarboxylase signature 333 343 1.5E-17 T 21-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 VFU_RS09890 bccf4b15f0ee82dc9d2a721ba1cf0247 399 PRINTS PR01182 Ornithine decarboxylase signature 135 157 1.5E-17 T 21-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 VFU_RS09890 bccf4b15f0ee82dc9d2a721ba1cf0247 399 PRINTS PR01182 Ornithine decarboxylase signature 35 59 1.5E-17 T 21-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 VFU_RS09890 bccf4b15f0ee82dc9d2a721ba1cf0247 399 PRINTS PR01182 Ornithine decarboxylase signature 302 315 1.5E-17 T 21-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 VFU_RS09890 bccf4b15f0ee82dc9d2a721ba1cf0247 399 PRINTS PR01182 Ornithine decarboxylase signature 61 88 1.5E-17 T 21-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 VFU_RS09890 bccf4b15f0ee82dc9d2a721ba1cf0247 399 Gene3D G3DSA:3.20.20.10 43 265 2.7E-63 T 21-04-2016 IPR029066 PLP-binding barrel VFU_RS09890 bccf4b15f0ee82dc9d2a721ba1cf0247 399 PANTHER PTHR11482 36 389 2.5E-114 T 21-04-2016 VFU_RS09890 bccf4b15f0ee82dc9d2a721ba1cf0247 399 PANTHER PTHR11482:SF6 36 389 2.5E-114 T 21-04-2016 VFU_RS09890 bccf4b15f0ee82dc9d2a721ba1cf0247 399 SUPERFAMILY SSF51419 41 279 9.89E-60 T 21-04-2016 IPR029066 PLP-binding barrel VFU_RS14545 9e0f1f0709ca9ee35ff2f3df58caac8e 163 SUPERFAMILY SSF55083 1 148 2.22E-37 T 21-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VFU_RS14545 9e0f1f0709ca9ee35ff2f3df58caac8e 163 PANTHER PTHR20941 1 163 1.6E-69 T 21-04-2016 VFU_RS14545 9e0f1f0709ca9ee35ff2f3df58caac8e 163 Gene3D G3DSA:3.30.70.560 3 148 1.9E-37 T 21-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VFU_RS14545 9e0f1f0709ca9ee35ff2f3df58caac8e 163 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 129 3.7E-29 T 21-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VFU_RS14545 9e0f1f0709ca9ee35ff2f3df58caac8e 163 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 129 2.5E-25 T 21-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VFU_RS14545 9e0f1f0709ca9ee35ff2f3df58caac8e 163 PANTHER PTHR20941:SF12 1 163 1.6E-69 T 21-04-2016 VFU_RS06715 de84efd53418fc529e07032cc4a4acdc 105 Gene3D G3DSA:1.10.3340.10 7 92 8.9E-43 T 21-04-2016 IPR023163 SMc04008-like domain VFU_RS06715 de84efd53418fc529e07032cc4a4acdc 105 Pfam PF06844 Protein of unknown function (DUF1244) 35 101 1.2E-34 T 21-04-2016 IPR023163 SMc04008-like domain VFU_RS06715 de84efd53418fc529e07032cc4a4acdc 105 SUPERFAMILY SSF158757 8 84 1.27E-35 T 21-04-2016 IPR023163 SMc04008-like domain VFU_RS00420 e938e4daebe755c44f6b1c770c090593 322 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 49.5 T 21-04-2016 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 VFU_RS00420 e938e4daebe755c44f6b1c770c090593 322 PANTHER PTHR11082:SF25 1 320 2.8E-149 T 21-04-2016 VFU_RS00420 e938e4daebe755c44f6b1c770c090593 322 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 320 8.8E-133 T 21-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 VFU_RS00420 e938e4daebe755c44f6b1c770c090593 322 PIRSF PIRSF006621 1 321 6.4E-102 T 21-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VFU_RS00420 e938e4daebe755c44f6b1c770c090593 322 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 21-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 VFU_RS00420 e938e4daebe755c44f6b1c770c090593 322 SUPERFAMILY SSF51395 10 319 2.93E-89 T 21-04-2016 VFU_RS00420 e938e4daebe755c44f6b1c770c090593 322 Gene3D G3DSA:3.20.20.70 7 245 2.5E-84 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS00420 e938e4daebe755c44f6b1c770c090593 322 Gene3D G3DSA:1.10.1200.80 252 320 2.8E-17 T 21-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 VFU_RS00420 e938e4daebe755c44f6b1c770c090593 322 PANTHER PTHR11082 1 320 2.8E-149 T 21-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VFU_RS00420 e938e4daebe755c44f6b1c770c090593 322 Pfam PF01207 Dihydrouridine synthase (Dus) 13 314 2.2E-110 T 21-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VFU_RS03570 35ea431312e9eebeb3a26639d15de951 536 Gene3D G3DSA:1.10.3720.10 285 525 9.7E-30 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS03570 35ea431312e9eebeb3a26639d15de951 536 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 9 518 1.2E-161 T 21-04-2016 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 VFU_RS03570 35ea431312e9eebeb3a26639d15de951 536 PANTHER PTHR30183 1 528 9.2E-231 T 21-04-2016 VFU_RS03570 35ea431312e9eebeb3a26639d15de951 536 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 65 257 4.0E-8 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS03570 35ea431312e9eebeb3a26639d15de951 536 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 354 516 6.0E-8 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS03570 35ea431312e9eebeb3a26639d15de951 536 Gene3D G3DSA:1.10.3720.10 13 256 1.3E-35 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS03570 35ea431312e9eebeb3a26639d15de951 536 SUPERFAMILY SSF161098 13 258 1.12E-41 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS03570 35ea431312e9eebeb3a26639d15de951 536 PANTHER PTHR30183:SF8 1 528 9.2E-231 T 21-04-2016 VFU_RS03570 35ea431312e9eebeb3a26639d15de951 536 SUPERFAMILY SSF161098 279 523 2.22E-32 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS04020 0caf10136db7a46ca2c738f9277af782 196 SUPERFAMILY SSF100950 4 194 2.79E-60 T 21-04-2016 VFU_RS04020 0caf10136db7a46ca2c738f9277af782 196 PANTHER PTHR23407 1 194 9.2E-68 T 21-04-2016 VFU_RS04020 0caf10136db7a46ca2c738f9277af782 196 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 5 188 6.9E-49 T 21-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase VFU_RS04020 0caf10136db7a46ca2c738f9277af782 196 Gene3D G3DSA:3.40.50.10420 5 195 4.1E-61 T 21-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain VFU_RS04020 0caf10136db7a46ca2c738f9277af782 196 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 5 188 1.3E-56 T 21-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase VFU_RS04020 0caf10136db7a46ca2c738f9277af782 196 PANTHER PTHR23407:SF1 1 194 9.2E-68 T 21-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase VFU_RS04020 0caf10136db7a46ca2c738f9277af782 196 PIRSF PIRSF006806 1 191 3.6E-40 T 21-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase VFU_RS06545 0e51ba6bdc6156ee4234b2a8193e56c4 255 Gene3D G3DSA:3.20.20.140 1 253 6.7E-87 T 21-04-2016 VFU_RS06545 0e51ba6bdc6156ee4234b2a8193e56c4 255 PANTHER PTHR10060:SF20 1 253 1.1E-126 T 21-04-2016 VFU_RS06545 0e51ba6bdc6156ee4234b2a8193e56c4 255 PIRSF PIRSF005902 1 255 1.0E-81 T 21-04-2016 IPR001130 TatD family GO:0016788 VFU_RS06545 0e51ba6bdc6156ee4234b2a8193e56c4 255 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 21-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VFU_RS06545 0e51ba6bdc6156ee4234b2a8193e56c4 255 SUPERFAMILY SSF51556 1 253 2.48E-87 T 21-04-2016 IPR032466 Metal-dependent hydrolase VFU_RS06545 0e51ba6bdc6156ee4234b2a8193e56c4 255 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 253 5.2E-91 T 21-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 VFU_RS06545 0e51ba6bdc6156ee4234b2a8193e56c4 255 PANTHER PTHR10060 1 253 1.1E-126 T 21-04-2016 IPR001130 TatD family GO:0016788 VFU_RS06545 0e51ba6bdc6156ee4234b2a8193e56c4 255 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 21-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VFU_RS06545 0e51ba6bdc6156ee4234b2a8193e56c4 255 Pfam PF01026 TatD related DNase 3 253 1.5E-75 T 21-04-2016 IPR001130 TatD family GO:0016788 VFU_RS01415 521a9c2f1386e2d33ef0a90d891c7b29 185 Gene3D G3DSA:3.90.870.10 3 185 1.4E-58 T 21-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain VFU_RS01415 521a9c2f1386e2d33ef0a90d891c7b29 185 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 5 185 2.9E-37 T 21-04-2016 IPR006070 YrdC-like domain GO:0003725 VFU_RS01415 521a9c2f1386e2d33ef0a90d891c7b29 185 PANTHER PTHR17490 2 180 3.0E-104 T 21-04-2016 VFU_RS01415 521a9c2f1386e2d33ef0a90d891c7b29 185 Pfam PF01300 Telomere recombination 9 185 1.7E-49 T 21-04-2016 IPR006070 YrdC-like domain GO:0003725 VFU_RS01415 521a9c2f1386e2d33ef0a90d891c7b29 185 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 1 183 41.133 T 21-04-2016 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 VFU_RS01415 521a9c2f1386e2d33ef0a90d891c7b29 185 SUPERFAMILY SSF55821 3 178 2.59E-56 T 21-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain VFU_RS01415 521a9c2f1386e2d33ef0a90d891c7b29 185 PANTHER PTHR17490:SF8 2 180 3.0E-104 T 21-04-2016 VFU_RS06495 0da649dfffa13efcad945eaa0ab64b78 341 PANTHER PTHR30100:SF1 2 341 2.8E-136 T 21-04-2016 VFU_RS06495 0da649dfffa13efcad945eaa0ab64b78 341 Gene3D G3DSA:3.40.718.10 3 335 3.5E-126 T 21-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 VFU_RS06495 0da649dfffa13efcad945eaa0ab64b78 341 SUPERFAMILY SSF53659 4 336 1.19E-100 T 21-04-2016 VFU_RS06495 0da649dfffa13efcad945eaa0ab64b78 341 Pfam PF02504 Fatty acid synthesis protein 5 327 4.6E-101 T 21-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 VFU_RS06495 0da649dfffa13efcad945eaa0ab64b78 341 PIRSF PIRSF002465 2 339 2.1E-124 T 21-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 VFU_RS06495 0da649dfffa13efcad945eaa0ab64b78 341 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 340 135.991 T 21-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 VFU_RS06495 0da649dfffa13efcad945eaa0ab64b78 341 PANTHER PTHR30100 2 341 2.8E-136 T 21-04-2016 VFU_RS06495 0da649dfffa13efcad945eaa0ab64b78 341 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 335 7.4E-106 T 21-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 VFU_RS14295 db8e62f9d0407b31fbeb451f3aaa2e14 189 PANTHER PTHR34606:SF4 1 189 3.1E-75 T 21-04-2016 VFU_RS14295 db8e62f9d0407b31fbeb451f3aaa2e14 189 Pfam PF04972 BON domain 122 188 5.9E-15 T 21-04-2016 IPR007055 BON domain VFU_RS14295 db8e62f9d0407b31fbeb451f3aaa2e14 189 Pfam PF04972 BON domain 46 112 7.0E-8 T 21-04-2016 IPR007055 BON domain VFU_RS14295 db8e62f9d0407b31fbeb451f3aaa2e14 189 PANTHER PTHR34606 1 189 3.1E-75 T 21-04-2016 VFU_RS14295 db8e62f9d0407b31fbeb451f3aaa2e14 189 SMART SM00749 127 189 0.0099 T 21-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria VFU_RS14295 db8e62f9d0407b31fbeb451f3aaa2e14 189 SMART SM00749 50 113 230.0 T 21-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria VFU_RS07190 9ba44ce08a6f82ddd7fae32428ab13f2 736 SMART SM01079 301 480 7.7E-28 T 21-04-2016 IPR006189 CHASE domain VFU_RS07190 9ba44ce08a6f82ddd7fae32428ab13f2 736 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 575 735 1.1E-46 T 21-04-2016 IPR000160 GGDEF domain VFU_RS07190 9ba44ce08a6f82ddd7fae32428ab13f2 736 SMART SM00267 565 736 7.0E-59 T 21-04-2016 IPR000160 GGDEF domain VFU_RS07190 9ba44ce08a6f82ddd7fae32428ab13f2 736 Gene3D G3DSA:3.30.70.270 579 735 3.7E-54 T 21-04-2016 VFU_RS07190 9ba44ce08a6f82ddd7fae32428ab13f2 736 PANTHER PTHR10799 610 731 1.3E-32 T 21-04-2016 VFU_RS07190 9ba44ce08a6f82ddd7fae32428ab13f2 736 PANTHER PTHR10799 440 586 1.3E-32 T 21-04-2016 VFU_RS07190 9ba44ce08a6f82ddd7fae32428ab13f2 736 Pfam PF00990 Diguanylate cyclase, GGDEF domain 577 731 4.0E-46 T 21-04-2016 IPR000160 GGDEF domain VFU_RS07190 9ba44ce08a6f82ddd7fae32428ab13f2 736 Pfam PF03924 CHASE domain 325 451 1.1E-11 T 21-04-2016 IPR006189 CHASE domain VFU_RS07190 9ba44ce08a6f82ddd7fae32428ab13f2 736 PANTHER PTHR10799:SF774 610 731 1.3E-32 T 21-04-2016 VFU_RS07190 9ba44ce08a6f82ddd7fae32428ab13f2 736 PANTHER PTHR10799:SF774 440 586 1.3E-32 T 21-04-2016 VFU_RS07190 9ba44ce08a6f82ddd7fae32428ab13f2 736 SUPERFAMILY SSF55073 582 735 3.37E-50 T 21-04-2016 IPR029787 Nucleotide cyclase VFU_RS07190 9ba44ce08a6f82ddd7fae32428ab13f2 736 Pfam PF17159 Membrane-associated sensor domain 32 249 1.6E-58 T 21-04-2016 IPR033425 Membrane-associated sensor domain MASE3 VFU_RS06125 729f71ea1d82f0e58b81cd7b152f5216 114 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 112 8.2E-33 T 21-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 VFU_RS06125 729f71ea1d82f0e58b81cd7b152f5216 114 PANTHER PTHR38689 2 114 3.2E-57 T 21-04-2016 VFU_RS06125 729f71ea1d82f0e58b81cd7b152f5216 114 Gene3D G3DSA:1.20.1300.10 1 113 4.1E-35 T 21-04-2016 VFU_RS06125 729f71ea1d82f0e58b81cd7b152f5216 114 SUPERFAMILY SSF81343 4 113 2.62E-24 T 21-04-2016 VFU_RS06125 729f71ea1d82f0e58b81cd7b152f5216 114 PIRSF PIRSF000169 1 114 8.2E-37 T 21-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 VFU_RS06125 729f71ea1d82f0e58b81cd7b152f5216 114 PANTHER PTHR38689:SF1 2 114 3.2E-57 T 21-04-2016 VFU_RS02960 e509d9091ac7482cb5c24672c7510794 116 Pfam PF11333 Protein of unknown function (DUF3135) 13 92 1.0E-31 T 21-04-2016 IPR021482 Protein of unknown function DUF3135 VFU_RS14285 8d4c8c27e7924451f3779189b41e991e 122 Hamap MF_00048 UPF0102 protein YraN [yraN]. 6 118 22.834 T 21-04-2016 IPR003509 Uncharacterised protein family UPF0102 VFU_RS14285 8d4c8c27e7924451f3779189b41e991e 122 PANTHER PTHR34039 2 122 4.0E-40 T 21-04-2016 VFU_RS14285 8d4c8c27e7924451f3779189b41e991e 122 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 6 120 5.2E-36 T 21-04-2016 IPR003509 Uncharacterised protein family UPF0102 VFU_RS14285 8d4c8c27e7924451f3779189b41e991e 122 PANTHER PTHR34039:SF1 2 122 4.0E-40 T 21-04-2016 VFU_RS14285 8d4c8c27e7924451f3779189b41e991e 122 SUPERFAMILY SSF52980 7 112 2.9E-21 T 21-04-2016 IPR011335 Restriction endonuclease type II-like VFU_RS14285 8d4c8c27e7924451f3779189b41e991e 122 Gene3D G3DSA:3.40.1350.10 13 119 2.6E-35 T 21-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 VFU_RS14285 8d4c8c27e7924451f3779189b41e991e 122 Pfam PF02021 Uncharacterised protein family UPF0102 13 105 3.0E-28 T 21-04-2016 IPR003509 Uncharacterised protein family UPF0102 VFU_RS11790 0f2d77d9fc392a88a46b83e4fdce11a9 208 PANTHER PTHR10381:SF22 12 206 3.4E-139 T 21-04-2016 VFU_RS11790 0f2d77d9fc392a88a46b83e4fdce11a9 208 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 1.4E-53 T 21-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VFU_RS11790 0f2d77d9fc392a88a46b83e4fdce11a9 208 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 1.4E-53 T 21-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VFU_RS11790 0f2d77d9fc392a88a46b83e4fdce11a9 208 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 1.4E-53 T 21-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VFU_RS11790 0f2d77d9fc392a88a46b83e4fdce11a9 208 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 1.4E-53 T 21-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VFU_RS11790 0f2d77d9fc392a88a46b83e4fdce11a9 208 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 1.4E-53 T 21-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VFU_RS11790 0f2d77d9fc392a88a46b83e4fdce11a9 208 Pfam PF00574 Clp protease 25 205 4.5E-88 T 21-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA VFU_RS11790 0f2d77d9fc392a88a46b83e4fdce11a9 208 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 21-04-2016 IPR018215 ClpP, Ser active site VFU_RS11790 0f2d77d9fc392a88a46b83e4fdce11a9 208 SUPERFAMILY SSF52096 23 206 1.56E-74 T 21-04-2016 IPR029045 ClpP/crotonase-like domain VFU_RS11790 0f2d77d9fc392a88a46b83e4fdce11a9 208 Gene3D G3DSA:3.90.226.10 16 204 9.5E-92 T 21-04-2016 IPR029045 ClpP/crotonase-like domain VFU_RS11790 0f2d77d9fc392a88a46b83e4fdce11a9 208 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 21-04-2016 IPR033135 ClpP, histidine active site VFU_RS11790 0f2d77d9fc392a88a46b83e4fdce11a9 208 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 15 205 2.6E-106 T 21-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VFU_RS11790 0f2d77d9fc392a88a46b83e4fdce11a9 208 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 44.195 T 21-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VFU_RS11790 0f2d77d9fc392a88a46b83e4fdce11a9 208 PANTHER PTHR10381 12 206 3.4E-139 T 21-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA VFU_RS09655 d9104527594c6a5bb61f51e31bb86eb9 316 Gene3D G3DSA:3.40.830.10 5 188 1.6E-86 T 21-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 VFU_RS09655 d9104527594c6a5bb61f51e31bb86eb9 316 Gene3D G3DSA:3.40.830.10 233 313 1.6E-86 T 21-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 VFU_RS09655 d9104527594c6a5bb61f51e31bb86eb9 316 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 6 307 3.0E-75 T 21-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 VFU_RS09655 d9104527594c6a5bb61f51e31bb86eb9 316 Hamap MF_01653 2,3-dihydroxyphenylpropionate/2,3-dihydroxicinnamic acid 1,2-dioxygenase [mhpB]. 2 314 53.215 T 21-04-2016 IPR023789 2,3-dihydroxyphenylpropionate/2,3-dihydroxicinnamic acid 1,2-dioxygenase GO:0005506|GO:0019439|GO:0047070|GO:0055114 KEGG: 00360+1.13.11.16|MetaCyc: PWY-6690|UniPathway: UPA00714 VFU_RS09655 d9104527594c6a5bb61f51e31bb86eb9 316 SUPERFAMILY SSF53213 3 186 1.06E-73 T 21-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 VFU_RS09655 d9104527594c6a5bb61f51e31bb86eb9 316 SUPERFAMILY SSF53213 231 309 1.06E-73 T 21-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 VFU_RS04335 acdd8d9df4bf20170789906ca9186c10 205 SUPERFAMILY SSF46689 9 85 1.8E-14 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS04335 acdd8d9df4bf20170789906ca9186c10 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 8.5E-6 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VFU_RS04335 acdd8d9df4bf20170789906ca9186c10 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 8.5E-6 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VFU_RS04335 acdd8d9df4bf20170789906ca9186c10 205 Gene3D G3DSA:1.10.357.10 17 199 4.6E-30 T 21-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 VFU_RS04335 acdd8d9df4bf20170789906ca9186c10 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 67 1.2E-11 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VFU_RS04335 acdd8d9df4bf20170789906ca9186c10 205 PANTHER PTHR30055 5 198 5.9E-22 T 21-04-2016 VFU_RS04335 acdd8d9df4bf20170789906ca9186c10 205 SUPERFAMILY SSF48498 90 198 2.15E-11 T 21-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal VFU_RS11815 94f8ba3ed97ccb1408d89f0eef2a8222 224 PANTHER PTHR35011 1 129 1.7E-79 T 21-04-2016 VFU_RS11815 94f8ba3ed97ccb1408d89f0eef2a8222 224 PANTHER PTHR35011 152 202 1.7E-79 T 21-04-2016 VFU_RS11815 94f8ba3ed97ccb1408d89f0eef2a8222 224 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 28 177 9.3E-27 T 21-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component VFU_RS11815 94f8ba3ed97ccb1408d89f0eef2a8222 224 PANTHER PTHR35011:SF1 1 129 1.7E-79 T 21-04-2016 VFU_RS11815 94f8ba3ed97ccb1408d89f0eef2a8222 224 PANTHER PTHR35011:SF1 152 202 1.7E-79 T 21-04-2016 VFU_RS11065 316d0fde928bca87621d8714edcc68cc 258 PANTHER PTHR30065 2 256 4.6E-63 T 21-04-2016 VFU_RS11065 316d0fde928bca87621d8714edcc68cc 258 PANTHER PTHR30065:SF1 2 256 4.6E-63 T 21-04-2016 VFU_RS11065 316d0fde928bca87621d8714edcc68cc 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 2.3E-21 T 21-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VFU_RS11065 316d0fde928bca87621d8714edcc68cc 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 2.3E-21 T 21-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VFU_RS11065 316d0fde928bca87621d8714edcc68cc 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 2.3E-21 T 21-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VFU_RS11065 316d0fde928bca87621d8714edcc68cc 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 2.3E-21 T 21-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VFU_RS11065 316d0fde928bca87621d8714edcc68cc 258 Pfam PF01311 Bacterial export proteins, family 1 15 245 5.6E-63 T 21-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VFU_RS11065 316d0fde928bca87621d8714edcc68cc 258 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 17 253 3.8E-59 T 21-04-2016 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 VFU_RS11025 b955a676c78c61c238b90d95ef897a80 397 SUPERFAMILY SSF117143 72 358 7.19E-77 T 21-04-2016 VFU_RS11025 b955a676c78c61c238b90d95ef897a80 397 Pfam PF07559 Flagellar basal body protein FlaE 172 278 1.8E-21 T 21-04-2016 IPR011491 Flagellar hook protein FlgE VFU_RS11025 b955a676c78c61c238b90d95ef897a80 397 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 330 394 5.4E-17 T 21-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VFU_RS11025 b955a676c78c61c238b90d95ef897a80 397 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 21-04-2016 IPR019776 Flagellar basal body rod protein, conserved site VFU_RS11025 b955a676c78c61c238b90d95ef897a80 397 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 379 7.9E-95 T 21-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G VFU_RS11025 b955a676c78c61c238b90d95ef897a80 397 Pfam PF00460 Flagella basal body rod protein 3 33 1.1E-10 T 21-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VFU_RS11025 b955a676c78c61c238b90d95ef897a80 397 PANTHER PTHR30435:SF1 1 117 5.2E-76 T 21-04-2016 VFU_RS11025 b955a676c78c61c238b90d95ef897a80 397 PANTHER PTHR30435:SF1 275 395 5.2E-76 T 21-04-2016 VFU_RS11025 b955a676c78c61c238b90d95ef897a80 397 PANTHER PTHR30435 1 117 5.2E-76 T 21-04-2016 VFU_RS11025 b955a676c78c61c238b90d95ef897a80 397 PANTHER PTHR30435 275 395 5.2E-76 T 21-04-2016 VFU_RS14780 7fb9bd8c4ebbb18832967ea3fe4b9f4c 341 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 3 332 1.0E-188 T 21-04-2016 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72|UniPathway: UPA00244 VFU_RS14780 7fb9bd8c4ebbb18832967ea3fe4b9f4c 341 SMART SM00846 2 159 2.4E-74 T 21-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 VFU_RS14780 7fb9bd8c4ebbb18832967ea3fe4b9f4c 341 Gene3D G3DSA:3.40.50.720 1 167 4.1E-64 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS14780 7fb9bd8c4ebbb18832967ea3fe4b9f4c 341 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 164 320 2.3E-55 T 21-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 VFU_RS14780 7fb9bd8c4ebbb18832967ea3fe4b9f4c 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 276 291 1.5E-30 T 21-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VFU_RS14780 7fb9bd8c4ebbb18832967ea3fe4b9f4c 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 153 171 1.5E-30 T 21-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VFU_RS14780 7fb9bd8c4ebbb18832967ea3fe4b9f4c 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 116 129 1.5E-30 T 21-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VFU_RS14780 7fb9bd8c4ebbb18832967ea3fe4b9f4c 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 180 196 1.5E-30 T 21-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VFU_RS14780 7fb9bd8c4ebbb18832967ea3fe4b9f4c 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 236 253 1.5E-30 T 21-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VFU_RS14780 7fb9bd8c4ebbb18832967ea3fe4b9f4c 341 PANTHER PTHR10836 1 337 4.0E-229 T 21-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VFU_RS14780 7fb9bd8c4ebbb18832967ea3fe4b9f4c 341 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 1 341 65.579 T 21-04-2016 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72|UniPathway: UPA00244 VFU_RS14780 7fb9bd8c4ebbb18832967ea3fe4b9f4c 341 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 159 7.7E-49 T 21-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 VFU_RS14780 7fb9bd8c4ebbb18832967ea3fe4b9f4c 341 PANTHER PTHR10836:SF47 1 337 4.0E-229 T 21-04-2016 VFU_RS14780 7fb9bd8c4ebbb18832967ea3fe4b9f4c 341 SUPERFAMILY SSF55347 159 321 3.27E-58 T 21-04-2016 VFU_RS14780 7fb9bd8c4ebbb18832967ea3fe4b9f4c 341 Gene3D G3DSA:3.30.360.10 168 322 2.2E-61 T 21-04-2016 VFU_RS14780 7fb9bd8c4ebbb18832967ea3fe4b9f4c 341 SUPERFAMILY SSF51735 2 185 1.7E-50 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS14780 7fb9bd8c4ebbb18832967ea3fe4b9f4c 341 PIRSF PIRSF000149 1 341 5.7E-126 T 21-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VFU_RS12005 5fd7e7d802b2ff794a293fd81629fd9f 285 SUPERFAMILY SSF53474 9 283 4.15E-46 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold VFU_RS12005 5fd7e7d802b2ff794a293fd81629fd9f 285 PANTHER PTHR10992 11 284 9.9E-39 T 21-04-2016 VFU_RS12005 5fd7e7d802b2ff794a293fd81629fd9f 285 Gene3D G3DSA:3.40.50.1820 10 282 5.8E-41 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold VFU_RS12005 5fd7e7d802b2ff794a293fd81629fd9f 285 PRINTS PR00111 Alpha/beta hydrolase fold signature 115 128 7.2E-5 T 21-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VFU_RS12005 5fd7e7d802b2ff794a293fd81629fd9f 285 PRINTS PR00111 Alpha/beta hydrolase fold signature 55 70 7.2E-5 T 21-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VFU_RS12005 5fd7e7d802b2ff794a293fd81629fd9f 285 PRINTS PR00111 Alpha/beta hydrolase fold signature 101 114 7.2E-5 T 21-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VFU_RS12005 5fd7e7d802b2ff794a293fd81629fd9f 285 PANTHER PTHR10992:SF699 11 284 9.9E-39 T 21-04-2016 VFU_RS12005 5fd7e7d802b2ff794a293fd81629fd9f 285 Pfam PF12697 Alpha/beta hydrolase family 29 272 3.1E-18 T 21-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VFU_RS00975 b378d6b33959f60c4c7838e18d704b9d 92 SUPERFAMILY SSF46689 1 89 5.73E-21 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS00975 b378d6b33959f60c4c7838e18d704b9d 92 Gene3D G3DSA:1.10.10.60 8 86 1.4E-19 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS00975 b378d6b33959f60c4c7838e18d704b9d 92 PANTHER PTHR33215 1 89 6.0E-25 T 21-04-2016 VFU_RS00975 b378d6b33959f60c4c7838e18d704b9d 92 Pfam PF01527 Transposase 4 70 9.7E-16 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 VFU_RS00975 b378d6b33959f60c4c7838e18d704b9d 92 PANTHER PTHR33215:SF1 1 89 6.0E-25 T 21-04-2016 VFU_RS07850 44afa23f9e6ab43f0171d64f10e9d842 209 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 11 209 37.948 T 21-04-2016 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19|UniPathway: UPA00031|UniPathway: UPA00031 VFU_RS07850 44afa23f9e6ab43f0171d64f10e9d842 209 SUPERFAMILY SSF101386 121 208 2.05E-25 T 21-04-2016 VFU_RS07850 44afa23f9e6ab43f0171d64f10e9d842 209 PANTHER PTHR21256 12 209 7.0E-115 T 21-04-2016 VFU_RS07850 44afa23f9e6ab43f0171d64f10e9d842 209 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 121 204 5.3E-32 T 21-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 VFU_RS07850 44afa23f9e6ab43f0171d64f10e9d842 209 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 36 108 1.3E-32 T 21-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 VFU_RS07850 44afa23f9e6ab43f0171d64f10e9d842 209 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 118 204 19.668 T 21-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 VFU_RS07850 44afa23f9e6ab43f0171d64f10e9d842 209 SUPERFAMILY SSF141734 12 122 2.09E-46 T 21-04-2016 VFU_RS07850 44afa23f9e6ab43f0171d64f10e9d842 209 PANTHER PTHR21256:SF16 12 209 7.0E-115 T 21-04-2016 VFU_RS07850 44afa23f9e6ab43f0171d64f10e9d842 209 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 59 108 5.0E-22 T 21-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 VFU_RS07850 44afa23f9e6ab43f0171d64f10e9d842 209 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 121 208 4.1E-18 T 21-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 VFU_RS05845 30b198015e5997efa0c683f53fca96f1 222 PANTHER PTHR30231 11 202 2.9E-35 T 21-04-2016 VFU_RS05845 30b198015e5997efa0c683f53fca96f1 222 Pfam PF00929 Exonuclease 35 199 2.6E-9 T 21-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VFU_RS05845 30b198015e5997efa0c683f53fca96f1 222 Gene3D G3DSA:3.30.420.10 27 209 4.9E-38 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VFU_RS05845 30b198015e5997efa0c683f53fca96f1 222 SUPERFAMILY SSF53098 23 208 1.32E-37 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VFU_RS05845 30b198015e5997efa0c683f53fca96f1 222 SMART SM00479 31 208 4.1E-17 T 21-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VFU_RS05845 30b198015e5997efa0c683f53fca96f1 222 PANTHER PTHR30231:SF11 11 202 2.9E-35 T 21-04-2016 VFU_RS12845 784005f51f69e662467f8f229de594e0 207 Pfam PF04390 Lipopolysaccharide-assembly 16 161 9.3E-19 T 21-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 VFU_RS12845 784005f51f69e662467f8f229de594e0 207 Gene3D G3DSA:3.30.160.150 24 170 1.1E-57 T 21-04-2016 VFU_RS12845 784005f51f69e662467f8f229de594e0 207 PANTHER PTHR38098:SF1 5 206 3.4E-55 T 21-04-2016 VFU_RS12845 784005f51f69e662467f8f229de594e0 207 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 9 166 24.67 T 21-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 VFU_RS12845 784005f51f69e662467f8f229de594e0 207 PANTHER PTHR38098 5 206 3.4E-55 T 21-04-2016 VFU_RS10280 a62990883fbec8a5de2340ffa56d16cf 216 SUPERFAMILY SSF53254 13 206 5.78E-31 T 21-04-2016 IPR029033 Histidine phosphatase superfamily VFU_RS10280 a62990883fbec8a5de2340ffa56d16cf 216 Gene3D G3DSA:3.40.50.1240 13 193 1.6E-29 T 21-04-2016 IPR029033 Histidine phosphatase superfamily VFU_RS10280 a62990883fbec8a5de2340ffa56d16cf 216 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 16 193 1.4E-29 T 21-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 VFU_RS10280 a62990883fbec8a5de2340ffa56d16cf 216 PANTHER PTHR23029 7 212 1.2E-21 T 21-04-2016 VFU_RS10280 a62990883fbec8a5de2340ffa56d16cf 216 SMART SM00855 15 163 4.2E-11 T 21-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 VFU_RS06370 161c20fc8cc10f9fd272e97b4ad253f4 160 PANTHER PTHR22769 1 126 1.2E-12 T 21-04-2016 VFU_RS06370 161c20fc8cc10f9fd272e97b4ad253f4 160 Gene3D G3DSA:3.90.79.10 3 130 2.7E-24 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VFU_RS06370 161c20fc8cc10f9fd272e97b4ad253f4 160 SUPERFAMILY SSF55811 4 127 4.33E-23 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VFU_RS06370 161c20fc8cc10f9fd272e97b4ad253f4 160 Pfam PF00293 NUDIX domain 5 122 2.2E-15 T 21-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 VFU_RS13425 1a70c7be1eb86ac1ee09ec45a62223ed 287 Pfam PF13481 AAA domain 7 180 4.8E-31 T 21-04-2016 VFU_RS13425 1a70c7be1eb86ac1ee09ec45a62223ed 287 Gene3D G3DSA:3.40.50.300 4 266 1.6E-86 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS13425 1a70c7be1eb86ac1ee09ec45a62223ed 287 SUPERFAMILY SSF52540 14 184 7.6E-15 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS10510 6d8d8090bf30a8a660d1392251d4568e 239 Pfam PF07702 UTRA domain 92 229 1.3E-34 T 21-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VFU_RS10510 6d8d8090bf30a8a660d1392251d4568e 239 PANTHER PTHR11751:SF364 2 95 1.3E-35 T 21-04-2016 VFU_RS10510 6d8d8090bf30a8a660d1392251d4568e 239 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 5 234 7.0E-94 T 21-04-2016 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 UniPathway: UPA00379 VFU_RS10510 6d8d8090bf30a8a660d1392251d4568e 239 SMART SM00345 10 69 5.0E-18 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VFU_RS10510 6d8d8090bf30a8a660d1392251d4568e 239 Gene3D G3DSA:1.10.10.10 2 74 7.1E-24 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS10510 6d8d8090bf30a8a660d1392251d4568e 239 Gene3D G3DSA:3.40.1410.10 90 225 1.1E-46 T 21-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain VFU_RS10510 6d8d8090bf30a8a660d1392251d4568e 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 69 7.9E-17 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VFU_RS10510 6d8d8090bf30a8a660d1392251d4568e 239 SUPERFAMILY SSF64288 96 232 2.36E-40 T 21-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain VFU_RS10510 6d8d8090bf30a8a660d1392251d4568e 239 SMART SM00866 92 229 1.7E-33 T 21-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VFU_RS10510 6d8d8090bf30a8a660d1392251d4568e 239 PANTHER PTHR11751 2 95 1.3E-35 T 21-04-2016 VFU_RS10510 6d8d8090bf30a8a660d1392251d4568e 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 9.5671E-6 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VFU_RS10510 6d8d8090bf30a8a660d1392251d4568e 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 9.5671E-6 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VFU_RS10510 6d8d8090bf30a8a660d1392251d4568e 239 SUPERFAMILY SSF46785 2 73 9.85E-21 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS11850 db9754c751237aa5a75cba2e3b76bd10 455 Gene3D G3DSA:3.30.1330.90 10 154 1.9E-49 T 21-04-2016 IPR029009 Allosteric substrate binding domain VFU_RS11850 db9754c751237aa5a75cba2e3b76bd10 455 Pfam PF03315 Serine dehydratase beta chain 3 152 7.9E-52 T 21-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 VFU_RS11850 db9754c751237aa5a75cba2e3b76bd10 455 Pfam PF03313 Serine dehydratase alpha chain 183 446 4.0E-95 T 21-04-2016 IPR005130 Serine dehydratase-like, alpha subunit VFU_RS11850 db9754c751237aa5a75cba2e3b76bd10 455 PANTHER PTHR30182:SF1 1 447 4.0E-220 T 21-04-2016 VFU_RS11850 db9754c751237aa5a75cba2e3b76bd10 455 SUPERFAMILY SSF143548 16 154 5.49E-43 T 21-04-2016 IPR029009 Allosteric substrate binding domain VFU_RS11850 db9754c751237aa5a75cba2e3b76bd10 455 PANTHER PTHR30182 1 447 4.0E-220 T 21-04-2016 VFU_RS11850 db9754c751237aa5a75cba2e3b76bd10 455 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 447 1.6E-197 T 21-04-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 VFU_RS08735 4eb8361d7c66af0d5225a5b3103d5f5e 459 PANTHER PTHR38605:SF1 1 459 2.0E-237 T 21-04-2016 VFU_RS08735 4eb8361d7c66af0d5225a5b3103d5f5e 459 Pfam PF04317 YcjX-like family, DUF463 20 458 6.9E-188 T 21-04-2016 IPR007413 Protein of unknown function DUF463, YcjX-like protein VFU_RS08735 4eb8361d7c66af0d5225a5b3103d5f5e 459 PANTHER PTHR38605 1 459 2.0E-237 T 21-04-2016 VFU_RS08735 4eb8361d7c66af0d5225a5b3103d5f5e 459 PIRSF PIRSF019381 1 459 8.0E-199 T 21-04-2016 IPR007413 Protein of unknown function DUF463, YcjX-like protein VFU_RS04450 333b828b8a5fb313f17f0cde7ef6d185 800 Pfam PF06165 Glycosyltransferase family 36 21 267 1.2E-84 T 21-04-2016 IPR010383 Glycosyl hydrolase 94 VFU_RS04450 333b828b8a5fb313f17f0cde7ef6d185 800 Gene3D G3DSA:1.50.10.10 509 570 2.1E-4 T 21-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 VFU_RS04450 333b828b8a5fb313f17f0cde7ef6d185 800 PANTHER PTHR37469:SF1 1 393 0.0 T 21-04-2016 VFU_RS04450 333b828b8a5fb313f17f0cde7ef6d185 800 PANTHER PTHR37469:SF1 419 800 0.0 T 21-04-2016 VFU_RS04450 333b828b8a5fb313f17f0cde7ef6d185 800 PANTHER PTHR37469 1 393 0.0 T 21-04-2016 VFU_RS04450 333b828b8a5fb313f17f0cde7ef6d185 800 PANTHER PTHR37469 419 800 0.0 T 21-04-2016 VFU_RS04450 333b828b8a5fb313f17f0cde7ef6d185 800 Gene3D G3DSA:2.60.420.10 723 782 3.1E-10 T 21-04-2016 VFU_RS04450 333b828b8a5fb313f17f0cde7ef6d185 800 SUPERFAMILY SSF74650 1 269 1.26E-80 T 21-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 VFU_RS04450 333b828b8a5fb313f17f0cde7ef6d185 800 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 296 728 1.3E-205 T 21-04-2016 IPR033432 Glycosyl hydrolase 36, catalytic domain VFU_RS04450 333b828b8a5fb313f17f0cde7ef6d185 800 SMART SM01068 1 63 9.9E-19 T 21-04-2016 IPR009342 Putative carbohydrate binding domain VFU_RS04450 333b828b8a5fb313f17f0cde7ef6d185 800 Gene3D G3DSA:2.70.98.40 1 325 2.2E-101 T 21-04-2016 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 VFU_RS04450 333b828b8a5fb313f17f0cde7ef6d185 800 SUPERFAMILY SSF48208 273 782 2.91E-107 T 21-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 VFU_RS11810 4f40b522d98ee0ac75677051e2c6f1ac 453 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 260 4.4E-85 T 21-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 VFU_RS11810 4f40b522d98ee0ac75677051e2c6f1ac 453 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 437 1.2E-115 T 21-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VFU_RS11810 4f40b522d98ee0ac75677051e2c6f1ac 453 PANTHER PTHR33362 1 451 1.2E-239 T 21-04-2016 VFU_RS11810 4f40b522d98ee0ac75677051e2c6f1ac 453 PANTHER PTHR33362:SF6 1 451 1.2E-239 T 21-04-2016 VFU_RS11745 02483524fd09a983dc14f37b8a6018cd 94 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 93 20.753 T 21-04-2016 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 VFU_RS11745 02483524fd09a983dc14f37b8a6018cd 94 Pfam PF06305 Protein of unknown function (DUF1049) 22 81 1.8E-19 T 21-04-2016 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 VFU_RS03415 f972b2ba293c4b3922e3af6dd192d342 165 Pfam PF11075 Protein of unknown function VcgC/VcgE (DUF2780) 11 160 3.9E-39 T 21-04-2016 IPR021302 Protein of unknown function DUF2780, VcgC/VcgE VFU_RS03415 f972b2ba293c4b3922e3af6dd192d342 165 Gene3D G3DSA:3.80.10.10 72 133 1.8E-4 T 21-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like VFU_RS03415 f972b2ba293c4b3922e3af6dd192d342 165 SUPERFAMILY SSF52047 72 144 1.51E-5 T 21-04-2016 VFU_RS11575 58c24f41404cc74e4cbe34e122f6ea11 247 PANTHER PTHR21485 1 245 4.1E-128 T 21-04-2016 VFU_RS11575 58c24f41404cc74e4cbe34e122f6ea11 247 Pfam PF02348 Cytidylyltransferase 5 220 1.3E-68 T 21-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 VFU_RS11575 58c24f41404cc74e4cbe34e122f6ea11 247 SUPERFAMILY SSF53448 1 245 1.15E-65 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VFU_RS11575 58c24f41404cc74e4cbe34e122f6ea11 247 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 247 47.666 T 21-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 VFU_RS11575 58c24f41404cc74e4cbe34e122f6ea11 247 Gene3D G3DSA:3.90.550.10 1 246 1.1E-87 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VFU_RS11575 58c24f41404cc74e4cbe34e122f6ea11 247 PANTHER PTHR21485:SF4 1 245 4.1E-128 T 21-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 VFU_RS11575 58c24f41404cc74e4cbe34e122f6ea11 247 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 240 3.9E-118 T 21-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 VFU_RS11500 bd2a8ad664a0e839f2645e29b7f8c32b 225 SUPERFAMILY SSF161098 12 203 1.83E-42 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS11500 bd2a8ad664a0e839f2645e29b7f8c32b 225 Gene3D G3DSA:1.10.3720.10 13 217 1.2E-43 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS11500 bd2a8ad664a0e839f2645e29b7f8c32b 225 PANTHER PTHR30450:SF4 1 225 5.1E-145 T 21-04-2016 VFU_RS11500 bd2a8ad664a0e839f2645e29b7f8c32b 225 PANTHER PTHR30450 1 225 5.1E-145 T 21-04-2016 VFU_RS11500 bd2a8ad664a0e839f2645e29b7f8c32b 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 216 1.6E-19 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS11500 bd2a8ad664a0e839f2645e29b7f8c32b 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 112 2.1E-23 T 21-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 VFU_RS07625 a21fdaaf95de1f0cba924a23a4ee3b37 486 Gene3D G3DSA:3.30.450.20 143 235 3.0E-5 T 21-04-2016 VFU_RS07625 a21fdaaf95de1f0cba924a23a4ee3b37 486 SMART SM00267 320 486 4.8E-38 T 21-04-2016 IPR000160 GGDEF domain VFU_RS07625 a21fdaaf95de1f0cba924a23a4ee3b37 486 Gene3D G3DSA:3.30.70.270 334 486 2.7E-38 T 21-04-2016 VFU_RS07625 a21fdaaf95de1f0cba924a23a4ee3b37 486 PANTHER PTHR10799 9 485 1.3E-14 T 21-04-2016 VFU_RS07625 a21fdaaf95de1f0cba924a23a4ee3b37 486 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 329 484 2.9E-39 T 21-04-2016 IPR000160 GGDEF domain VFU_RS07625 a21fdaaf95de1f0cba924a23a4ee3b37 486 SUPERFAMILY SSF55073 337 486 6.67E-35 T 21-04-2016 IPR029787 Nucleotide cyclase VFU_RS07625 a21fdaaf95de1f0cba924a23a4ee3b37 486 Pfam PF00990 Diguanylate cyclase, GGDEF domain 332 482 1.4E-35 T 21-04-2016 IPR000160 GGDEF domain VFU_RS07625 a21fdaaf95de1f0cba924a23a4ee3b37 486 PANTHER PTHR10799:SF706 9 485 1.3E-14 T 21-04-2016 VFU_RS14865 4c004f5fa560d769f6475c086b6270a5 97 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 12 82 3.8E-24 T 21-04-2016 IPR003746 Protein of unknown function DUF167 VFU_RS14865 4c004f5fa560d769f6475c086b6270a5 97 Gene3D G3DSA:3.30.1200.10 3 93 1.1E-28 T 21-04-2016 IPR003746 Protein of unknown function DUF167 VFU_RS14865 4c004f5fa560d769f6475c086b6270a5 97 Hamap MF_00634 UPF0235 protein YggU [yggU]. 8 94 19.303 T 21-04-2016 IPR003746 Protein of unknown function DUF167 VFU_RS14865 4c004f5fa560d769f6475c086b6270a5 97 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 9 92 1.4E-25 T 21-04-2016 IPR005228 Conserved hypothetical protein CHP00251 VFU_RS14865 4c004f5fa560d769f6475c086b6270a5 97 PANTHER PTHR13420 12 97 4.9E-24 T 21-04-2016 VFU_RS14865 4c004f5fa560d769f6475c086b6270a5 97 SMART SM01152 8 84 4.7E-37 T 21-04-2016 IPR003746 Protein of unknown function DUF167 VFU_RS14865 4c004f5fa560d769f6475c086b6270a5 97 SUPERFAMILY SSF69786 3 96 5.36E-31 T 21-04-2016 IPR003746 Protein of unknown function DUF167 VFU_RS04435 f211f07a82c94eadfe6246975d22f584 541 SUPERFAMILY SSF161098 282 535 3.82E-39 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS04435 f211f07a82c94eadfe6246975d22f584 541 SUPERFAMILY SSF161098 5 258 1.96E-44 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS04435 f211f07a82c94eadfe6246975d22f584 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 68 254 6.1E-13 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS04435 f211f07a82c94eadfe6246975d22f584 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 353 533 4.2E-7 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS04435 f211f07a82c94eadfe6246975d22f584 541 Gene3D G3DSA:1.10.3720.10 6 264 9.1E-38 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS04435 f211f07a82c94eadfe6246975d22f584 541 Gene3D G3DSA:1.10.3720.10 284 536 4.6E-31 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS04435 f211f07a82c94eadfe6246975d22f584 541 PANTHER PTHR30183:SF2 407 541 9.6E-270 T 21-04-2016 VFU_RS04435 f211f07a82c94eadfe6246975d22f584 541 PANTHER PTHR30183:SF2 2 390 9.6E-270 T 21-04-2016 VFU_RS04435 f211f07a82c94eadfe6246975d22f584 541 PANTHER PTHR30183 407 541 9.6E-270 T 21-04-2016 VFU_RS04435 f211f07a82c94eadfe6246975d22f584 541 PANTHER PTHR30183 2 390 9.6E-270 T 21-04-2016 VFU_RS09145 31442d00fe650b2b4a1589f9358ae859 271 Gene3D G3DSA:3.40.190.10 14 154 1.0E-45 T 21-04-2016 VFU_RS09145 31442d00fe650b2b4a1589f9358ae859 271 Pfam PF12849 PBP superfamily domain 21 249 5.0E-30 T 21-04-2016 IPR024370 PBP domain VFU_RS09145 31442d00fe650b2b4a1589f9358ae859 271 SUPERFAMILY SSF53850 29 257 5.12E-30 T 21-04-2016 VFU_RS09145 31442d00fe650b2b4a1589f9358ae859 271 PANTHER PTHR37945 22 271 6.4E-110 T 21-04-2016 VFU_RS09145 31442d00fe650b2b4a1589f9358ae859 271 Gene3D G3DSA:3.40.190.10 189 270 1.9E-28 T 21-04-2016 VFU_RS15355 0c2d9147b02a2d60ede878898d6e37bc 254 Gene3D G3DSA:2.40.160.10 42 126 6.0E-4 T 21-04-2016 IPR023614 Porin domain VFU_RS15355 0c2d9147b02a2d60ede878898d6e37bc 254 Pfam PF04338 Protein of unknown function, DUF481 39 254 2.6E-49 T 21-04-2016 IPR007433 Protein of unknown function DUF481 VFU_RS01735 2b5bfacba40bc5fe391cbe56e6ac0cfd 265 Pfam PF00486 Transcriptional regulatory protein, C terminal 27 94 1.5E-8 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VFU_RS01735 2b5bfacba40bc5fe391cbe56e6ac0cfd 265 SUPERFAMILY SSF46894 18 93 5.67E-10 T 21-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VFU_RS01735 2b5bfacba40bc5fe391cbe56e6ac0cfd 265 Gene3D G3DSA:1.10.10.10 12 94 1.4E-8 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS01735 2b5bfacba40bc5fe391cbe56e6ac0cfd 265 SMART SM00862 27 100 3.9E-7 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VFU_RS14025 f6bcc66f232acaad65b79a087483a44f 225 SMART SM00986 49 210 1.5E-40 T 21-04-2016 IPR005122 Uracil-DNA glycosylase-like VFU_RS14025 f6bcc66f232acaad65b79a087483a44f 225 SMART SM00987 49 210 1.5E-40 T 21-04-2016 VFU_RS14025 f6bcc66f232acaad65b79a087483a44f 225 Pfam PF03167 Uracil DNA glycosylase superfamily 54 209 6.4E-26 T 21-04-2016 IPR005122 Uracil-DNA glycosylase-like VFU_RS14025 f6bcc66f232acaad65b79a087483a44f 225 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 21-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 VFU_RS14025 f6bcc66f232acaad65b79a087483a44f 225 PANTHER PTHR11264 1 224 1.8E-169 T 21-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 VFU_RS14025 f6bcc66f232acaad65b79a087483a44f 225 Gene3D G3DSA:3.40.470.10 6 221 1.8E-103 T 21-04-2016 IPR005122 Uracil-DNA glycosylase-like VFU_RS14025 f6bcc66f232acaad65b79a087483a44f 225 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 40.481 T 21-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 VFU_RS14025 f6bcc66f232acaad65b79a087483a44f 225 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 214 3.9E-88 T 21-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 VFU_RS14025 f6bcc66f232acaad65b79a087483a44f 225 PANTHER PTHR11264:SF10 1 224 1.8E-169 T 21-04-2016 VFU_RS14025 f6bcc66f232acaad65b79a087483a44f 225 SUPERFAMILY SSF52141 5 221 8.94E-97 T 21-04-2016 IPR005122 Uracil-DNA glycosylase-like VFU_RS08890 39a771019666a31c67377ec5ce7ead5f 625 SUPERFAMILY SSF56801 4 623 3.92E-157 T 21-04-2016 VFU_RS08890 39a771019666a31c67377ec5ce7ead5f 625 Gene3D G3DSA:2.30.38.10 413 492 6.7E-9 T 21-04-2016 VFU_RS08890 39a771019666a31c67377ec5ce7ead5f 625 PANTHER PTHR24095 1 623 0.0 T 21-04-2016 VFU_RS08890 39a771019666a31c67377ec5ce7ead5f 625 Gene3D G3DSA:3.40.50.980 67 242 8.5E-35 T 21-04-2016 VFU_RS08890 39a771019666a31c67377ec5ce7ead5f 625 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 4 56 7.9E-12 T 21-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 VFU_RS08890 39a771019666a31c67377ec5ce7ead5f 625 Gene3D G3DSA:3.40.50.980 243 403 8.9E-30 T 21-04-2016 VFU_RS08890 39a771019666a31c67377ec5ce7ead5f 625 Pfam PF00501 AMP-binding enzyme 66 501 3.5E-83 T 21-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VFU_RS08890 39a771019666a31c67377ec5ce7ead5f 625 Gene3D G3DSA:3.30.300.30 496 599 1.1E-23 T 21-04-2016 VFU_RS08890 39a771019666a31c67377ec5ce7ead5f 625 PANTHER PTHR24095:SF160 1 623 0.0 T 21-04-2016 VFU_RS08890 39a771019666a31c67377ec5ce7ead5f 625 Pfam PF13193 AMP-binding enzyme C-terminal domain 510 589 2.7E-25 T 21-04-2016 IPR025110 AMP-binding enzyme C-terminal domain VFU_RS08890 39a771019666a31c67377ec5ce7ead5f 625 ProSitePatterns PS00455 Putative AMP-binding domain signature. 237 248 - T 21-04-2016 IPR020845 AMP-binding, conserved site VFU_RS06420 7d8ece862b87e1985eec0e2478120010 333 Pfam PF04245 37-kD nucleoid-associated bacterial protein 9 326 1.8E-100 T 21-04-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 VFU_RS06420 7d8ece862b87e1985eec0e2478120010 333 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 332 46.969 T 21-04-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 VFU_RS06420 7d8ece862b87e1985eec0e2478120010 333 PANTHER PTHR38772 2 331 7.0E-170 T 21-04-2016 VFU_RS07110 e9bcffcc319b070c6fca1b201fadcd85 186 Gene3D G3DSA:2.60.40.420 65 185 3.2E-25 T 21-04-2016 IPR008972 Cupredoxin VFU_RS07110 e9bcffcc319b070c6fca1b201fadcd85 186 SUPERFAMILY SSF49503 76 186 9.33E-22 T 21-04-2016 IPR008972 Cupredoxin VFU_RS13320 aba8ffde76b94c43f466ce967a4927ea 515 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 462 4.4E-135 T 21-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VFU_RS13320 aba8ffde76b94c43f466ce967a4927ea 515 PANTHER PTHR30330 345 494 6.0E-303 T 21-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VFU_RS13320 aba8ffde76b94c43f466ce967a4927ea 515 PANTHER PTHR30330 1 329 6.0E-303 T 21-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VFU_RS13320 aba8ffde76b94c43f466ce967a4927ea 515 PRINTS PR00175 Sodium/alanine symporter signature 428 448 2.1E-57 T 21-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VFU_RS13320 aba8ffde76b94c43f466ce967a4927ea 515 PRINTS PR00175 Sodium/alanine symporter signature 304 322 2.1E-57 T 21-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VFU_RS13320 aba8ffde76b94c43f466ce967a4927ea 515 PRINTS PR00175 Sodium/alanine symporter signature 217 236 2.1E-57 T 21-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VFU_RS13320 aba8ffde76b94c43f466ce967a4927ea 515 PRINTS PR00175 Sodium/alanine symporter signature 86 108 2.1E-57 T 21-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VFU_RS13320 aba8ffde76b94c43f466ce967a4927ea 515 PRINTS PR00175 Sodium/alanine symporter signature 365 387 2.1E-57 T 21-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VFU_RS13320 aba8ffde76b94c43f466ce967a4927ea 515 PRINTS PR00175 Sodium/alanine symporter signature 189 207 2.1E-57 T 21-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VFU_RS13320 aba8ffde76b94c43f466ce967a4927ea 515 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 86 101 - T 21-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VFU_RS13320 aba8ffde76b94c43f466ce967a4927ea 515 Pfam PF01235 Sodium:alanine symporter family 51 472 2.9E-148 T 21-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VFU_RS13320 aba8ffde76b94c43f466ce967a4927ea 515 PANTHER PTHR30330:SF7 345 494 6.0E-303 T 21-04-2016 VFU_RS13320 aba8ffde76b94c43f466ce967a4927ea 515 PANTHER PTHR30330:SF7 1 329 6.0E-303 T 21-04-2016 VFU_RS02435 cc543a002840a7066dfb79825eab42d9 123 Pfam PF07226 Protein of unknown function (DUF1422) 10 118 5.8E-48 T 21-04-2016 IPR009867 Protein of unknown function DUF1422 VFU_RS02435 cc543a002840a7066dfb79825eab42d9 123 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 10 116 5.0E-47 T 21-04-2016 IPR009867 Protein of unknown function DUF1422 VFU_RS07205 3501f65314a54aa4c0d375a58f48011d 335 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 5 216 8.2E-43 T 21-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VFU_RS07205 3501f65314a54aa4c0d375a58f48011d 335 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 5 324 4.8E-97 T 21-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VFU_RS07205 3501f65314a54aa4c0d375a58f48011d 335 PANTHER PTHR30365 1 335 3.2E-153 T 21-04-2016 VFU_RS07205 3501f65314a54aa4c0d375a58f48011d 335 PANTHER PTHR30365:SF4 1 335 3.2E-153 T 21-04-2016 VFU_RS14745 6ec64e0838f862899a7318328d6c46ae 232 PANTHER PTHR34387 7 232 1.1E-55 T 21-04-2016 VFU_RS14745 6ec64e0838f862899a7318328d6c46ae 232 PANTHER PTHR34387:SF1 7 232 1.1E-55 T 21-04-2016 VFU_RS14745 6ec64e0838f862899a7318328d6c46ae 232 Pfam PF04402 Protein of unknown function (DUF541) 31 228 1.1E-39 T 21-04-2016 IPR007497 Protein of unknown function DUF541 VFU_RS07675 2d20caf4e35685136d514abd496ddd4a 317 SUPERFAMILY SSF52418 76 311 1.02E-38 T 21-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 VFU_RS07675 2d20caf4e35685136d514abd496ddd4a 317 SUPERFAMILY SSF47648 8 71 1.27E-14 T 21-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain VFU_RS07675 2d20caf4e35685136d514abd496ddd4a 317 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 1.4E-11 T 21-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain VFU_RS07675 2d20caf4e35685136d514abd496ddd4a 317 Gene3D G3DSA:1.20.970.10 13 70 1.4E-12 T 21-04-2016 VFU_RS07675 2d20caf4e35685136d514abd496ddd4a 317 Gene3D G3DSA:3.40.1030.10 80 277 8.8E-29 T 21-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 VFU_RS03210 6944baa1414f5bd25c41e48eec14f790 69 PIRSF PIRSF006169 1 69 1.9E-34 T 21-04-2016 IPR010648 Uncharacterised protein family UPF0270 VFU_RS03210 6944baa1414f5bd25c41e48eec14f790 69 SUPERFAMILY SSF118001 1 66 6.41E-28 T 21-04-2016 IPR010648 Uncharacterised protein family UPF0270 VFU_RS03210 6944baa1414f5bd25c41e48eec14f790 69 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 64 7.0E-24 T 21-04-2016 IPR010648 Uncharacterised protein family UPF0270 VFU_RS03210 6944baa1414f5bd25c41e48eec14f790 69 Gene3D G3DSA:1.10.10.610 1 66 2.9E-35 T 21-04-2016 IPR010648 Uncharacterised protein family UPF0270 VFU_RS03210 6944baa1414f5bd25c41e48eec14f790 69 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 66 4.4E-34 T 21-04-2016 IPR010648 Uncharacterised protein family UPF0270 VFU_RS07640 dd556042aae7242de676075db9605e66 206 SUPERFAMILY SSF103642 186 205 1.96E-7 T 21-04-2016 VFU_RS07640 dd556042aae7242de676075db9605e66 206 Pfam PF03695 Uncharacterised protein family (UPF0149) 8 162 1.2E-7 T 21-04-2016 IPR011978 Uncharacterised protein family UPF0149 VFU_RS07640 dd556042aae7242de676075db9605e66 206 Pfam PF02810 SEC-C motif 188 206 1.8E-10 T 21-04-2016 IPR004027 SEC-C motif VFU_RS07640 dd556042aae7242de676075db9605e66 206 Gene3D G3DSA:3.10.450.50 167 206 2.3E-12 T 21-04-2016 IPR032710 NTF2-like domain VFU_RS07640 dd556042aae7242de676075db9605e66 206 SUPERFAMILY SSF101327 9 118 4.58E-6 T 21-04-2016 IPR011978 Uncharacterised protein family UPF0149 VFU_RS07640 dd556042aae7242de676075db9605e66 206 PANTHER PTHR33747:SF1 9 206 6.3E-26 T 21-04-2016 VFU_RS07640 dd556042aae7242de676075db9605e66 206 PANTHER PTHR33747 9 206 6.3E-26 T 21-04-2016 VFU_RS14885 f66c52effae6659e5f55effa5b37c8e4 306 Pfam PF04960 Glutaminase 22 306 6.6E-113 T 21-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 VFU_RS14885 f66c52effae6659e5f55effa5b37c8e4 306 SUPERFAMILY SSF56601 7 306 7.89E-114 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VFU_RS14885 f66c52effae6659e5f55effa5b37c8e4 306 PANTHER PTHR12544 6 306 3.0E-156 T 21-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 VFU_RS14885 f66c52effae6659e5f55effa5b37c8e4 306 Gene3D G3DSA:3.40.710.10 2 306 1.4E-124 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VFU_RS14885 f66c52effae6659e5f55effa5b37c8e4 306 Hamap MF_00313 Glutaminase [glsA]. 4 306 47.075 T 21-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 VFU_RS14885 f66c52effae6659e5f55effa5b37c8e4 306 TIGRFAM TIGR03814 Gln_ase: glutaminase A 8 306 1.5E-130 T 21-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 VFU_RS07030 ed163a060b41862542b0fb6231dc7ff8 120 PANTHER PTHR38013 9 118 1.4E-44 T 21-04-2016 VFU_RS07030 ed163a060b41862542b0fb6231dc7ff8 120 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 8 112 2.0E-44 T 21-04-2016 VFU_RS07775 2817edbf632a7d9c87ff28af6c87ac41 175 Pfam PF12915 Protein of unknown function (DUF3833) 14 174 7.0E-66 T 21-04-2016 IPR024409 Protein of unknown function DUF3833 VFU_RS04090 62b278505b49bdf1ed607c333ed23e11 156 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 16 149 3.7E-32 T 21-04-2016 IPR007359 Positive regulator of sigma(E), RseC/MucC VFU_RS04090 62b278505b49bdf1ed607c333ed23e11 156 PANTHER PTHR35867:SF1 5 156 4.3E-34 T 21-04-2016 VFU_RS04090 62b278505b49bdf1ed607c333ed23e11 156 PANTHER PTHR35867 5 156 4.3E-34 T 21-04-2016 VFU_RS04090 62b278505b49bdf1ed607c333ed23e11 156 PIRSF PIRSF004923 1 156 6.4E-38 T 21-04-2016 IPR026268 Protein RseC VFU_RS00405 e29607532e5fec04d7f40f243ab16b2b 151 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 112 125 7.9E-19 T 21-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 VFU_RS00405 e29607532e5fec04d7f40f243ab16b2b 151 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 97 111 7.9E-19 T 21-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 VFU_RS00405 e29607532e5fec04d7f40f243ab16b2b 151 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 80 93 7.9E-19 T 21-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 VFU_RS00405 e29607532e5fec04d7f40f243ab16b2b 151 SUPERFAMILY SSF51230 76 151 1.03E-26 T 21-04-2016 IPR011053 Single hybrid motif VFU_RS00405 e29607532e5fec04d7f40f243ab16b2b 151 Pfam PF00364 Biotin-requiring enzyme 78 150 2.0E-25 T 21-04-2016 IPR000089 Biotin/lipoyl attachment VFU_RS00405 e29607532e5fec04d7f40f243ab16b2b 151 PANTHER PTHR23151 1 151 3.6E-51 T 21-04-2016 VFU_RS00405 e29607532e5fec04d7f40f243ab16b2b 151 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 107 124 - T 21-04-2016 IPR001882 Biotin-binding site VFU_RS00405 e29607532e5fec04d7f40f243ab16b2b 151 Gene3D G3DSA:2.40.50.100 75 151 5.9E-33 T 21-04-2016 VFU_RS00405 e29607532e5fec04d7f40f243ab16b2b 151 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 151 8.7E-62 T 21-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 VFU_RS00805 963976e8e79ab4f75c7441d5c03e8902 165 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 9 161 2.9E-58 T 21-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 VFU_RS00805 963976e8e79ab4f75c7441d5c03e8902 165 Pfam PF01467 Cytidylyltransferase-like 10 138 2.0E-20 T 21-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VFU_RS00805 963976e8e79ab4f75c7441d5c03e8902 165 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 8 67 8.3E-20 T 21-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VFU_RS00805 963976e8e79ab4f75c7441d5c03e8902 165 PANTHER PTHR21342 1 161 5.1E-78 T 21-04-2016 VFU_RS00805 963976e8e79ab4f75c7441d5c03e8902 165 PANTHER PTHR21342:SF1 1 161 5.1E-78 T 21-04-2016 VFU_RS00805 963976e8e79ab4f75c7441d5c03e8902 165 SUPERFAMILY SSF52374 8 162 5.63E-45 T 21-04-2016 VFU_RS00805 963976e8e79ab4f75c7441d5c03e8902 165 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 7 163 35.072 T 21-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 VFU_RS00805 963976e8e79ab4f75c7441d5c03e8902 165 Gene3D G3DSA:3.40.50.620 8 163 1.8E-53 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VFU_RS00805 963976e8e79ab4f75c7441d5c03e8902 165 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 54 78 8.3E-50 T 21-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 VFU_RS00805 963976e8e79ab4f75c7441d5c03e8902 165 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 25 46 8.3E-50 T 21-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 VFU_RS00805 963976e8e79ab4f75c7441d5c03e8902 165 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 90 106 8.3E-50 T 21-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 VFU_RS00805 963976e8e79ab4f75c7441d5c03e8902 165 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 7 25 8.3E-50 T 21-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 VFU_RS00805 963976e8e79ab4f75c7441d5c03e8902 165 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 117 139 8.3E-50 T 21-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 VFU_RS14035 f0b94a42544453efbe756ae9058a887f 125 PIRSF PIRSF000378 2 125 6.4E-53 T 21-04-2016 IPR011140 Autonomous glycyl radical cofactor GrcA VFU_RS14035 f0b94a42544453efbe756ae9058a887f 125 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 125 1.7E-68 T 21-04-2016 IPR011140 Autonomous glycyl radical cofactor GrcA VFU_RS14035 f0b94a42544453efbe756ae9058a887f 125 Pfam PF01228 Glycine radical 16 106 4.8E-22 T 21-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 VFU_RS14035 f0b94a42544453efbe756ae9058a887f 125 ProSitePatterns PS00850 Glycine radical domain signature. 95 103 - T 21-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VFU_RS14035 f0b94a42544453efbe756ae9058a887f 125 SUPERFAMILY SSF51998 63 124 1.65E-23 T 21-04-2016 VFU_RS14035 f0b94a42544453efbe756ae9058a887f 125 PANTHER PTHR30191:SF5 1 125 3.1E-92 T 21-04-2016 VFU_RS14035 f0b94a42544453efbe756ae9058a887f 125 Gene3D G3DSA:3.20.70.20 60 124 2.9E-33 T 21-04-2016 VFU_RS14035 f0b94a42544453efbe756ae9058a887f 125 PANTHER PTHR30191 1 125 3.1E-92 T 21-04-2016 VFU_RS14035 f0b94a42544453efbe756ae9058a887f 125 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 125 40.044 T 21-04-2016 IPR011140 Autonomous glycyl radical cofactor GrcA VFU_RS06035 e8840b652a0fb226ff75513a586a346b 672 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 5 661 27.401 T 21-04-2016 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 VFU_RS06035 e8840b652a0fb226ff75513a586a346b 672 PANTHER PTHR13847:SF182 607 669 1.7E-140 T 21-04-2016 VFU_RS06035 e8840b652a0fb226ff75513a586a346b 672 PANTHER PTHR13847:SF182 224 588 1.7E-140 T 21-04-2016 VFU_RS06035 e8840b652a0fb226ff75513a586a346b 672 PANTHER PTHR13847 607 669 1.7E-140 T 21-04-2016 VFU_RS06035 e8840b652a0fb226ff75513a586a346b 672 PANTHER PTHR13847 224 588 1.7E-140 T 21-04-2016 VFU_RS06035 e8840b652a0fb226ff75513a586a346b 672 Pfam PF01266 FAD dependent oxidoreductase 265 636 4.3E-43 T 21-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VFU_RS06035 e8840b652a0fb226ff75513a586a346b 672 Gene3D G3DSA:3.40.50.150 9 248 2.7E-101 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS06035 e8840b652a0fb226ff75513a586a346b 672 Gene3D G3DSA:3.50.50.60 264 339 7.6E-23 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS06035 e8840b652a0fb226ff75513a586a346b 672 Gene3D G3DSA:3.50.50.60 395 480 7.6E-23 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS06035 e8840b652a0fb226ff75513a586a346b 672 Gene3D G3DSA:3.50.50.60 574 651 7.6E-23 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS06035 e8840b652a0fb226ff75513a586a346b 672 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 116 242 2.8E-47 T 21-04-2016 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 VFU_RS06035 e8840b652a0fb226ff75513a586a346b 672 SUPERFAMILY SSF51905 265 481 7.77E-29 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS06035 e8840b652a0fb226ff75513a586a346b 672 SUPERFAMILY SSF51905 574 664 7.77E-29 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS06035 e8840b652a0fb226ff75513a586a346b 672 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 265 666 3.3E-147 T 21-04-2016 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 VFU_RS04360 dc6ca1adfdac23852596345e3ab3fcb7 293 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 1.2E-101 T 21-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 VFU_RS04360 dc6ca1adfdac23852596345e3ab3fcb7 293 SUPERFAMILY SSF52374 1 281 1.77E-108 T 21-04-2016 VFU_RS04360 dc6ca1adfdac23852596345e3ab3fcb7 293 PANTHER PTHR21299 1 293 3.8E-137 T 21-04-2016 VFU_RS04360 dc6ca1adfdac23852596345e3ab3fcb7 293 Gene3D G3DSA:3.40.50.620 1 176 9.9E-80 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VFU_RS04360 dc6ca1adfdac23852596345e3ab3fcb7 293 PANTHER PTHR21299:SF1 1 293 3.8E-137 T 21-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 VFU_RS04360 dc6ca1adfdac23852596345e3ab3fcb7 293 Gene3D G3DSA:3.30.1300.10 177 288 5.4E-27 T 21-04-2016 VFU_RS04360 dc6ca1adfdac23852596345e3ab3fcb7 293 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 23 62 1.5E-9 T 21-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VFU_RS04360 dc6ca1adfdac23852596345e3ab3fcb7 293 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 40.17 T 21-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 VFU_RS04360 dc6ca1adfdac23852596345e3ab3fcb7 293 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 281 3.0E-106 T 21-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 VFU_RS03325 e8e764d1406227e555953c375f914102 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 21-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS03325 e8e764d1406227e555953c375f914102 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 3 81 25.915 T 21-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS03325 e8e764d1406227e555953c375f914102 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 6 76 7.0E-36 T 21-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS03325 e8e764d1406227e555953c375f914102 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 2.0E-14 T 21-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS03325 e8e764d1406227e555953c375f914102 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 2.0E-14 T 21-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS03325 e8e764d1406227e555953c375f914102 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 2.0E-14 T 21-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS03325 e8e764d1406227e555953c375f914102 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 3.8E-38 T 21-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS03325 e8e764d1406227e555953c375f914102 84 SUPERFAMILY SSF50249 5 83 4.28E-34 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS03325 e8e764d1406227e555953c375f914102 84 PANTHER PTHR10744 2 84 4.5E-44 T 21-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS03325 e8e764d1406227e555953c375f914102 84 Gene3D G3DSA:2.40.50.140 6 82 6.2E-37 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS03325 e8e764d1406227e555953c375f914102 84 Pfam PF00366 Ribosomal protein S17 10 77 1.9E-34 T 21-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS06060 fe0fca60266797bb32daacb095830136 177 Pfam PF14539 Domain of unknown function (DUF4442) 14 151 1.5E-23 T 21-04-2016 IPR027961 Protein of unknown function DUF4442 VFU_RS06060 fe0fca60266797bb32daacb095830136 177 Gene3D G3DSA:3.10.129.10 10 157 7.2E-36 T 21-04-2016 IPR029069 HotDog domain VFU_RS06060 fe0fca60266797bb32daacb095830136 177 SUPERFAMILY SSF54637 11 156 9.33E-23 T 21-04-2016 IPR029069 HotDog domain VFU_RS14690 32d67baa589ee72ed3767bf0672ec11f 523 Gene3D G3DSA:3.30.1360.60 448 521 8.7E-28 T 21-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VFU_RS14690 32d67baa589ee72ed3767bf0672ec11f 523 PANTHER PTHR30009 10 522 2.7E-268 T 21-04-2016 VFU_RS14690 32d67baa589ee72ed3767bf0672ec11f 523 Pfam PF00367 phosphotransferase system, EIIB 449 481 1.5E-15 T 21-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VFU_RS14690 32d67baa589ee72ed3767bf0672ec11f 523 Pfam PF02378 Phosphotransferase system, EIIC 17 357 2.9E-85 T 21-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VFU_RS14690 32d67baa589ee72ed3767bf0672ec11f 523 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 459 476 - T 21-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VFU_RS14690 32d67baa589ee72ed3767bf0672ec11f 523 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 416 506 1.2E-22 T 21-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VFU_RS14690 32d67baa589ee72ed3767bf0672ec11f 523 SUPERFAMILY SSF55604 449 520 2.88E-21 T 21-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VFU_RS14690 32d67baa589ee72ed3767bf0672ec11f 523 TIGRFAM TIGR02004 PTS-IIBC-malX: PTS system, maltose and glucose-specific IIBC component 6 520 1.7E-298 T 21-04-2016 IPR011301 PTS system, maltose/glucose-specific IIBC component GO:0008982|GO:0009401 VFU_RS14690 32d67baa589ee72ed3767bf0672ec11f 523 PANTHER PTHR30009:SF1 10 522 2.7E-268 T 21-04-2016 VFU_RS14125 dfa56bc0d1d6fba200b469dde0722d11 317 PANTHER PTHR34308 4 317 2.5E-74 T 21-04-2016 VFU_RS14125 dfa56bc0d1d6fba200b469dde0722d11 317 Pfam PF03186 CobD/Cbib protein 19 283 7.8E-34 T 21-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 VFU_RS14125 dfa56bc0d1d6fba200b469dde0722d11 317 PANTHER PTHR34308:SF1 4 317 2.5E-74 T 21-04-2016 VFU_RS15040 4e40d8ee7ca71f44d5c7053794a8010f 468 Pfam PF13520 Amino acid permease 5 438 1.4E-74 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 VFU_RS15040 4e40d8ee7ca71f44d5c7053794a8010f 468 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 3 466 4.3E-166 T 21-04-2016 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 VFU_RS15040 4e40d8ee7ca71f44d5c7053794a8010f 468 PANTHER PTHR11785 1 439 3.1E-222 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 VFU_RS15040 4e40d8ee7ca71f44d5c7053794a8010f 468 PANTHER PTHR11785:SF77 1 439 3.1E-222 T 21-04-2016 VFU_RS15040 4e40d8ee7ca71f44d5c7053794a8010f 468 PIRSF PIRSF006060 1 464 1.9E-49 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 VFU_RS04875 6f840a36d0640cedc48ea0f19addd572 375 SUPERFAMILY SSF48179 241 366 1.59E-40 T 21-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VFU_RS04875 6f840a36d0640cedc48ea0f19addd572 375 PIRSF PIRSF001499 1 374 6.0E-177 T 21-04-2016 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00122 VFU_RS04875 6f840a36d0640cedc48ea0f19addd572 375 Gene3D G3DSA:1.10.3660.10 249 373 5.6E-53 T 21-04-2016 VFU_RS04875 6f840a36d0640cedc48ea0f19addd572 375 Pfam PF01817 Chorismate mutase type II 9 87 2.7E-21 T 21-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 VFU_RS04875 6f840a36d0640cedc48ea0f19addd572 375 SUPERFAMILY SSF51735 91 237 6.69E-38 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS04875 6f840a36d0640cedc48ea0f19addd572 375 PANTHER PTHR21363:SF0 88 370 1.1E-72 T 21-04-2016 VFU_RS04875 6f840a36d0640cedc48ea0f19addd572 375 SMART SM00830 9 89 3.0E-29 T 21-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 VFU_RS04875 6f840a36d0640cedc48ea0f19addd572 375 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 1.0E-40 T 21-04-2016 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00122 VFU_RS04875 6f840a36d0640cedc48ea0f19addd572 375 SUPERFAMILY SSF48600 3 87 9.89E-24 T 21-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 VFU_RS04875 6f840a36d0640cedc48ea0f19addd572 375 PANTHER PTHR21363 88 370 1.1E-72 T 21-04-2016 VFU_RS04875 6f840a36d0640cedc48ea0f19addd572 375 Gene3D G3DSA:1.20.59.10 4 83 5.8E-23 T 21-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 VFU_RS04875 6f840a36d0640cedc48ea0f19addd572 375 Pfam PF02153 Prephenate dehydrogenase 134 344 2.6E-31 T 21-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 VFU_RS04875 6f840a36d0640cedc48ea0f19addd572 375 Gene3D G3DSA:3.40.50.720 84 247 4.3E-47 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS15220 ba771acd90a180adc18be6825b6a0172 216 SUPERFAMILY SSF46894 140 212 8.16E-19 T 21-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VFU_RS15220 ba771acd90a180adc18be6825b6a0172 216 PANTHER PTHR26402 109 213 2.0E-19 T 21-04-2016 VFU_RS15220 ba771acd90a180adc18be6825b6a0172 216 PANTHER PTHR26402:SF151 109 213 2.0E-19 T 21-04-2016 VFU_RS15220 ba771acd90a180adc18be6825b6a0172 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 156 210 5.2E-18 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VFU_RS15220 ba771acd90a180adc18be6825b6a0172 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 2.7E-11 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VFU_RS15220 ba771acd90a180adc18be6825b6a0172 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 2.7E-11 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VFU_RS15220 ba771acd90a180adc18be6825b6a0172 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 2.7E-11 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VFU_RS15220 ba771acd90a180adc18be6825b6a0172 216 Gene3D G3DSA:1.10.10.10 149 213 1.3E-21 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS15220 ba771acd90a180adc18be6825b6a0172 216 SMART SM00421 153 210 8.1E-19 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VFU_RS14850 8728ce94c0e4f0a5b54a3a411dff9db4 235 SUPERFAMILY SSF51419 1 228 5.76E-83 T 21-04-2016 IPR029066 PLP-binding barrel VFU_RS14850 8728ce94c0e4f0a5b54a3a411dff9db4 235 PIRSF PIRSF004848 1 235 3.0E-77 T 21-04-2016 IPR011078 Uncharacterised protein family UPF0001 VFU_RS14850 8728ce94c0e4f0a5b54a3a411dff9db4 235 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 230 1.4E-84 T 21-04-2016 IPR011078 Uncharacterised protein family UPF0001 VFU_RS14850 8728ce94c0e4f0a5b54a3a411dff9db4 235 PANTHER PTHR10146 1 235 3.4E-107 T 21-04-2016 IPR011078 Uncharacterised protein family UPF0001 VFU_RS14850 8728ce94c0e4f0a5b54a3a411dff9db4 235 Gene3D G3DSA:3.20.20.10 1 234 9.8E-93 T 21-04-2016 IPR029066 PLP-binding barrel VFU_RS14850 8728ce94c0e4f0a5b54a3a411dff9db4 235 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 80 94 - T 21-04-2016 IPR011078 Uncharacterised protein family UPF0001 VFU_RS14850 8728ce94c0e4f0a5b54a3a411dff9db4 235 Pfam PF01168 Alanine racemase, N-terminal domain 7 230 5.6E-32 T 21-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VFU_RS13760 5f4d1e23adc8e917b5d183cb88ea8ad9 718 Gene3D G3DSA:3.40.50.300 631 688 8.0E-12 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS13760 5f4d1e23adc8e917b5d183cb88ea8ad9 718 Gene3D G3DSA:3.40.50.300 446 474 9.7E-50 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS13760 5f4d1e23adc8e917b5d183cb88ea8ad9 718 Gene3D G3DSA:3.40.50.300 236 413 9.7E-50 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS13760 5f4d1e23adc8e917b5d183cb88ea8ad9 718 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 15 710 2.5E-214 T 21-04-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 VFU_RS13760 5f4d1e23adc8e917b5d183cb88ea8ad9 718 PANTHER PTHR10887:SF351 670 678 9.3E-89 T 21-04-2016 VFU_RS13760 5f4d1e23adc8e917b5d183cb88ea8ad9 718 PANTHER PTHR10887:SF351 233 414 9.3E-89 T 21-04-2016 VFU_RS13760 5f4d1e23adc8e917b5d183cb88ea8ad9 718 SUPERFAMILY SSF52540 239 456 1.99E-44 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS13760 5f4d1e23adc8e917b5d183cb88ea8ad9 718 SUPERFAMILY SSF52540 17 169 1.99E-44 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS13760 5f4d1e23adc8e917b5d183cb88ea8ad9 718 SUPERFAMILY SSF52540 443 474 4.86E-59 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS13760 5f4d1e23adc8e917b5d183cb88ea8ad9 718 SUPERFAMILY SSF52540 537 711 4.86E-59 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS13760 5f4d1e23adc8e917b5d183cb88ea8ad9 718 SUPERFAMILY SSF52540 376 416 4.86E-59 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS13760 5f4d1e23adc8e917b5d183cb88ea8ad9 718 PANTHER PTHR10887 670 678 9.3E-89 T 21-04-2016 VFU_RS13760 5f4d1e23adc8e917b5d183cb88ea8ad9 718 PANTHER PTHR10887 233 414 9.3E-89 T 21-04-2016 VFU_RS13760 5f4d1e23adc8e917b5d183cb88ea8ad9 718 Pfam PF13538 UvrD-like helicase C-terminal domain 639 685 1.1E-14 T 21-04-2016 IPR027785 UvrD-like helicase C-terminal domain VFU_RS13760 5f4d1e23adc8e917b5d183cb88ea8ad9 718 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 23 710 52.717 T 21-04-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 VFU_RS13760 5f4d1e23adc8e917b5d183cb88ea8ad9 718 Pfam PF13604 AAA domain 249 410 2.4E-30 T 21-04-2016 VFU_RS02875 86e8678d4902b54137e9245fe342ca0b 295 Gene3D G3DSA:3.20.20.220 10 293 4.2E-106 T 21-04-2016 IPR029041 FAD-linked oxidoreductase-like VFU_RS02875 86e8678d4902b54137e9245fe342ca0b 295 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 24 289 9.7E-103 T 21-04-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 VFU_RS02875 86e8678d4902b54137e9245fe342ca0b 295 SUPERFAMILY SSF51730 21 293 1.0E-95 T 21-04-2016 IPR029041 FAD-linked oxidoreductase-like VFU_RS02875 86e8678d4902b54137e9245fe342ca0b 295 Pfam PF02219 Methylenetetrahydrofolate reductase 16 290 1.6E-101 T 21-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 VFU_RS02875 86e8678d4902b54137e9245fe342ca0b 295 PANTHER PTHR21091 148 279 1.1E-41 T 21-04-2016 VFU_RS10550 5e60910da664de723b1f01f47cea4e10 226 Pfam PF11813 Protein of unknown function (DUF3334) 3 226 7.1E-116 T 21-04-2016 IPR024513 Protein of unknown function DUF3334 VFU_RS10550 5e60910da664de723b1f01f47cea4e10 226 SUPERFAMILY SSF103039 10 173 6.93E-24 T 21-04-2016 IPR028976 CheC-like domain VFU_RS10550 5e60910da664de723b1f01f47cea4e10 226 Gene3D G3DSA:3.40.1550.10 16 174 3.8E-14 T 21-04-2016 IPR028976 CheC-like domain VFU_RS12655 5b52b999ea94e9f7563fd70321cfde46 554 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 373 1.9E-115 T 21-04-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|UniPathway: UPA00134 VFU_RS12655 5b52b999ea94e9f7563fd70321cfde46 554 Gene3D G3DSA:3.40.50.620 191 510 3.0E-115 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VFU_RS12655 5b52b999ea94e9f7563fd70321cfde46 554 Pfam PF00733 Asparagine synthase 212 511 3.6E-95 T 21-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 VFU_RS12655 5b52b999ea94e9f7563fd70321cfde46 554 SUPERFAMILY SSF52402 210 479 1.6E-73 T 21-04-2016 VFU_RS12655 5b52b999ea94e9f7563fd70321cfde46 554 Gene3D G3DSA:3.60.20.10 2 188 2.3E-66 T 21-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VFU_RS12655 5b52b999ea94e9f7563fd70321cfde46 554 PANTHER PTHR11772:SF11 2 538 9.4E-297 T 21-04-2016 VFU_RS12655 5b52b999ea94e9f7563fd70321cfde46 554 SUPERFAMILY SSF56235 1 196 8.23E-57 T 21-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VFU_RS12655 5b52b999ea94e9f7563fd70321cfde46 554 Pfam PF13537 Glutamine amidotransferase domain 48 166 8.0E-40 T 21-04-2016 IPR017932 Glutamine amidotransferase type 2 domain VFU_RS12655 5b52b999ea94e9f7563fd70321cfde46 554 PANTHER PTHR11772 2 538 9.4E-297 T 21-04-2016 VFU_RS00620 906708ae85819c4a8500e40033b82681 182 Gene3D G3DSA:3.40.630.30 9 159 2.4E-17 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase VFU_RS00620 906708ae85819c4a8500e40033b82681 182 SUPERFAMILY SSF55729 9 156 1.38E-13 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase VFU_RS00765 66d06a9654bb5668bb9ed7efab621913 348 Gene3D G3DSA:3.40.50.1000 232 315 8.0E-5 T 21-04-2016 IPR023214 HAD-like domain VFU_RS00765 66d06a9654bb5668bb9ed7efab621913 348 SUPERFAMILY SSF53448 3 231 1.62E-13 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VFU_RS00765 66d06a9654bb5668bb9ed7efab621913 348 Gene3D G3DSA:3.90.550.10 1 231 2.0E-13 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VFU_RS04845 823812d070408e2e9f7ec642a2b70c1c 310 Pfam PF13580 SIS domain 49 172 7.7E-10 T 21-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 VFU_RS04845 823812d070408e2e9f7ec642a2b70c1c 310 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 9 302 43.9 T 21-04-2016 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 VFU_RS04845 823812d070408e2e9f7ec642a2b70c1c 310 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 192 209 - T 21-04-2016 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 VFU_RS04845 823812d070408e2e9f7ec642a2b70c1c 310 Gene3D G3DSA:3.40.50.10490 11 256 1.6E-89 T 21-04-2016 VFU_RS04845 823812d070408e2e9f7ec642a2b70c1c 310 PANTHER PTHR10088:SF5 1 310 2.5E-201 T 21-04-2016 VFU_RS04845 823812d070408e2e9f7ec642a2b70c1c 310 PANTHER PTHR10088 1 310 2.5E-201 T 21-04-2016 VFU_RS04845 823812d070408e2e9f7ec642a2b70c1c 310 SUPERFAMILY SSF53697 12 256 4.89E-74 T 21-04-2016 VFU_RS04845 823812d070408e2e9f7ec642a2b70c1c 310 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 13 302 8.7E-133 T 21-04-2016 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 VFU_RS07970 df7b583e5ceb09e9d09c7c912ff0d113 215 PANTHER PTHR34227 1 208 7.5E-76 T 21-04-2016 VFU_RS07970 df7b583e5ceb09e9d09c7c912ff0d113 215 Gene3D G3DSA:1.10.3480.10 2 213 5.8E-49 T 21-04-2016 IPR020945 DMSO/Nitrate reductase chaperone VFU_RS07970 df7b583e5ceb09e9d09c7c912ff0d113 215 Pfam PF02613 Nitrate reductase delta subunit 52 182 2.3E-40 T 21-04-2016 IPR020945 DMSO/Nitrate reductase chaperone VFU_RS07970 df7b583e5ceb09e9d09c7c912ff0d113 215 SUPERFAMILY SSF89155 8 212 5.76E-52 T 21-04-2016 IPR020945 DMSO/Nitrate reductase chaperone VFU_RS07970 df7b583e5ceb09e9d09c7c912ff0d113 215 PANTHER PTHR34227:SF1 1 208 7.5E-76 T 21-04-2016 VFU_RS07970 df7b583e5ceb09e9d09c7c912ff0d113 215 Hamap MF_01150 Chaperone protein TorD [torD]. 3 212 33.547 T 21-04-2016 IPR023069 Chaperone TorD VFU_RS05960 1cda6b300c7fe3cc435e7ed4a459e423 165 PANTHER PTHR35091:SF1 1 165 5.4E-62 T 21-04-2016 VFU_RS05960 1cda6b300c7fe3cc435e7ed4a459e423 165 PANTHER PTHR35091 1 165 5.4E-62 T 21-04-2016 VFU_RS05960 1cda6b300c7fe3cc435e7ed4a459e423 165 Pfam PF03748 Flagellar basal body-associated protein FliL 64 165 1.4E-19 T 21-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 VFU_RS00970 d6a73b376c4ccc09b4de57ef5c0c390e 240 Pfam PF00665 Integrase core domain 104 217 1.3E-32 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 VFU_RS00970 d6a73b376c4ccc09b4de57ef5c0c390e 240 Gene3D G3DSA:3.30.420.10 97 221 2.6E-30 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VFU_RS00970 d6a73b376c4ccc09b4de57ef5c0c390e 240 SUPERFAMILY SSF53098 96 226 7.33E-37 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VFU_RS00970 d6a73b376c4ccc09b4de57ef5c0c390e 240 Pfam PF13276 HTH-like domain 24 78 2.1E-12 T 21-04-2016 IPR025948 HTH-like domain VFU_RS00970 d6a73b376c4ccc09b4de57ef5c0c390e 240 PANTHER PTHR32552 1 238 3.8E-64 T 21-04-2016 VFU_RS08790 699ec68ba3ffcf961b04b4608f0c0773 98 SUPERFAMILY SSF54909 3 82 3.64E-25 T 21-04-2016 IPR011008 Dimeric alpha-beta barrel VFU_RS08790 699ec68ba3ffcf961b04b4608f0c0773 98 PANTHER PTHR33336:SF5 1 82 3.8E-22 T 21-04-2016 VFU_RS08790 699ec68ba3ffcf961b04b4608f0c0773 98 Gene3D G3DSA:3.30.70.900 1 82 3.6E-28 T 21-04-2016 VFU_RS08790 699ec68ba3ffcf961b04b4608f0c0773 98 PANTHER PTHR33336 1 82 3.8E-22 T 21-04-2016 VFU_RS08790 699ec68ba3ffcf961b04b4608f0c0773 98 Pfam PF03992 Antibiotic biosynthesis monooxygenase 4 78 2.5E-19 T 21-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain VFU_RS04680 5ec2f4c131b5ac72e0cca71a019fe13a 168 PANTHER PTHR23091:SF237 1 164 1.4E-23 T 21-04-2016 VFU_RS04680 5ec2f4c131b5ac72e0cca71a019fe13a 168 Gene3D G3DSA:3.40.630.30 1 125 1.2E-19 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase VFU_RS04680 5ec2f4c131b5ac72e0cca71a019fe13a 168 SUPERFAMILY SSF55729 1 159 9.01E-27 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase VFU_RS04680 5ec2f4c131b5ac72e0cca71a019fe13a 168 Pfam PF00583 Acetyltransferase (GNAT) family 49 123 1.0E-8 T 21-04-2016 IPR000182 GNAT domain GO:0008080 VFU_RS04680 5ec2f4c131b5ac72e0cca71a019fe13a 168 PANTHER PTHR23091 1 164 1.4E-23 T 21-04-2016 VFU_RS00555 15ebdb8a79aded962307c0acbca79f75 358 PANTHER PTHR12526 4 357 2.3E-39 T 21-04-2016 VFU_RS00555 15ebdb8a79aded962307c0acbca79f75 358 SUPERFAMILY SSF53756 5 355 2.2E-60 T 21-04-2016 VFU_RS00555 15ebdb8a79aded962307c0acbca79f75 358 Pfam PF00534 Glycosyl transferases group 1 177 334 6.6E-31 T 21-04-2016 IPR001296 Glycosyl transferase, family 1 VFU_RS00555 15ebdb8a79aded962307c0acbca79f75 358 Pfam PF13439 Glycosyltransferase Family 4 16 171 2.5E-8 T 21-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain VFU_RS00555 15ebdb8a79aded962307c0acbca79f75 358 Gene3D G3DSA:3.40.50.2000 180 334 2.6E-21 T 21-04-2016 VFU_RS00555 15ebdb8a79aded962307c0acbca79f75 358 PANTHER PTHR12526:SF374 4 357 2.3E-39 T 21-04-2016 VFU_RS03625 e25c859a1605397ff4d26d002360beec 163 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 20 160 1.3E-46 T 21-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 VFU_RS03625 e25c859a1605397ff4d26d002360beec 163 Pfam PF03968 OstA-like protein 30 141 1.0E-29 T 21-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal VFU_RS03625 e25c859a1605397ff4d26d002360beec 163 Gene3D G3DSA:2.60.450.10 21 156 1.6E-38 T 21-04-2016 VFU_RS03625 e25c859a1605397ff4d26d002360beec 163 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 1 160 24.245 T 21-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 VFU_RS03625 e25c859a1605397ff4d26d002360beec 163 PANTHER PTHR36504 6 163 4.0E-51 T 21-04-2016 VFU_RS02940 bdc2a411e8a54964426f44abcbc24d88 453 PIRSF PIRSF006603 1 449 4.0E-126 T 21-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VFU_RS02940 bdc2a411e8a54964426f44abcbc24d88 453 PANTHER PTHR11206 3 447 6.8E-236 T 21-04-2016 VFU_RS02940 bdc2a411e8a54964426f44abcbc24d88 453 Pfam PF01554 MatE 245 406 4.5E-20 T 21-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VFU_RS02940 bdc2a411e8a54964426f44abcbc24d88 453 Pfam PF01554 MatE 22 176 1.5E-25 T 21-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VFU_RS02940 bdc2a411e8a54964426f44abcbc24d88 453 PANTHER PTHR11206:SF142 3 447 6.8E-236 T 21-04-2016 VFU_RS02940 bdc2a411e8a54964426f44abcbc24d88 453 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 414 9.4E-54 T 21-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VFU_RS00185 afd01275bdee0ac4ffaa179b8e0feb99 378 SUPERFAMILY SSF51261 169 376 8.37E-47 T 21-04-2016 IPR011055 Duplicated hybrid motif VFU_RS00185 afd01275bdee0ac4ffaa179b8e0feb99 378 PANTHER PTHR21666 32 376 1.5E-98 T 21-04-2016 VFU_RS00185 afd01275bdee0ac4ffaa179b8e0feb99 378 Pfam PF01551 Peptidase family M23 279 372 5.3E-24 T 21-04-2016 IPR016047 Peptidase M23 VFU_RS00185 afd01275bdee0ac4ffaa179b8e0feb99 378 Gene3D G3DSA:2.70.70.10 236 377 4.5E-34 T 21-04-2016 VFU_RS00185 afd01275bdee0ac4ffaa179b8e0feb99 378 ProDom PD936484 POLYPROTEIN GLYCOPROTEIN M G2 TRANSMEMBRANE NONSTRUCTURAL MEMBRANE CONTAINS: PRECURSOR SIGNAL 73 203 0.007 T 21-04-2016 VFU_RS00185 afd01275bdee0ac4ffaa179b8e0feb99 378 PANTHER PTHR21666:SF213 32 376 1.5E-98 T 21-04-2016 VFU_RS06245 d960a006c80eaca80b79a658db5c8609 238 Pfam PF04344 Chemotaxis phosphatase, CheZ 37 238 1.1E-78 T 21-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- VFU_RS06245 d960a006c80eaca80b79a658db5c8609 238 PANTHER PTHR22617:SF35 65 238 9.7E-82 T 21-04-2016 VFU_RS06245 d960a006c80eaca80b79a658db5c8609 238 SUPERFAMILY SSF75708 26 237 8.37E-67 T 21-04-2016 VFU_RS06245 d960a006c80eaca80b79a658db5c8609 238 PIRSF PIRSF002884 13 238 9.3E-91 T 21-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- VFU_RS06245 d960a006c80eaca80b79a658db5c8609 238 Gene3D G3DSA:1.10.287.500 57 189 4.9E-52 T 21-04-2016 VFU_RS06245 d960a006c80eaca80b79a658db5c8609 238 PANTHER PTHR22617 65 238 9.7E-82 T 21-04-2016 VFU_RS08125 da7c461bcdbc9145dea0306262f53b43 262 Gene3D G3DSA:3.40.50.300 2 253 1.7E-66 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS08125 da7c461bcdbc9145dea0306262f53b43 262 PANTHER PTHR24220 7 259 1.3E-118 T 21-04-2016 VFU_RS08125 da7c461bcdbc9145dea0306262f53b43 262 SMART SM00382 39 228 4.2E-13 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS08125 da7c461bcdbc9145dea0306262f53b43 262 Pfam PF00005 ABC transporter 31 179 3.3E-30 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS08125 da7c461bcdbc9145dea0306262f53b43 262 SUPERFAMILY SSF52540 3 252 4.36E-58 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS08125 da7c461bcdbc9145dea0306262f53b43 262 PANTHER PTHR24220:SF81 7 259 1.3E-118 T 21-04-2016 VFU_RS04370 8ba2b134378043e3ac72b156dfd64af9 169 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 5.0E-38 T 21-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VFU_RS04370 8ba2b134378043e3ac72b156dfd64af9 169 PANTHER PTHR20941 1 164 7.1E-74 T 21-04-2016 VFU_RS04370 8ba2b134378043e3ac72b156dfd64af9 169 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 2.7E-46 T 21-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VFU_RS04370 8ba2b134378043e3ac72b156dfd64af9 169 Gene3D G3DSA:3.30.70.560 3 152 5.9E-57 T 21-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VFU_RS04370 8ba2b134378043e3ac72b156dfd64af9 169 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 21-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VFU_RS04370 8ba2b134378043e3ac72b156dfd64af9 169 SUPERFAMILY SSF55083 1 157 7.72E-54 T 21-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VFU_RS05985 a4074640349b0f14c7b1da0cc9d55dc1 89 PANTHER PTHR34040 1 89 2.6E-35 T 21-04-2016 VFU_RS05985 a4074640349b0f14c7b1da0cc9d55dc1 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 5.9E-16 T 21-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VFU_RS05985 a4074640349b0f14c7b1da0cc9d55dc1 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 5.9E-16 T 21-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VFU_RS05985 a4074640349b0f14c7b1da0cc9d55dc1 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 5.9E-16 T 21-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VFU_RS05985 a4074640349b0f14c7b1da0cc9d55dc1 89 PANTHER PTHR34040:SF2 1 89 2.6E-35 T 21-04-2016 VFU_RS05985 a4074640349b0f14c7b1da0cc9d55dc1 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 1.5E-31 T 21-04-2016 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 VFU_RS05985 a4074640349b0f14c7b1da0cc9d55dc1 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 1.0E-26 T 21-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VFU_RS05985 a4074640349b0f14c7b1da0cc9d55dc1 89 PIRSF PIRSF004669 1 89 6.9E-28 T 21-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VFU_RS11960 515c9767185b60879108076ce8347932 315 Gene3D G3DSA:3.40.190.10 91 175 2.4E-10 T 21-04-2016 VFU_RS11960 515c9767185b60879108076ce8347932 315 PANTHER PTHR30537:SF14 1 313 1.2E-189 T 21-04-2016 VFU_RS11960 515c9767185b60879108076ce8347932 315 Pfam PF03466 LysR substrate binding domain 90 295 1.1E-46 T 21-04-2016 IPR005119 LysR, substrate-binding VFU_RS11960 515c9767185b60879108076ce8347932 315 Gene3D G3DSA:3.40.190.10 176 263 1.0E-22 T 21-04-2016 VFU_RS11960 515c9767185b60879108076ce8347932 315 SUPERFAMILY SSF46785 7 114 6.19E-22 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS11960 515c9767185b60879108076ce8347932 315 SUPERFAMILY SSF53850 91 299 8.69E-49 T 21-04-2016 VFU_RS11960 515c9767185b60879108076ce8347932 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 1.8E-18 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS11960 515c9767185b60879108076ce8347932 315 Gene3D G3DSA:1.10.10.10 7 86 2.6E-24 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS11960 515c9767185b60879108076ce8347932 315 PANTHER PTHR30537 1 313 1.2E-189 T 21-04-2016 VFU_RS12965 0f22ff6f79cf8ff84345f43add274f19 563 SUPERFAMILY SSF51445 9 475 1.98E-157 T 21-04-2016 IPR017853 Glycoside hydrolase superfamily VFU_RS12965 0f22ff6f79cf8ff84345f43add274f19 563 Gene3D G3DSA:3.20.20.80 180 479 7.3E-126 T 21-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VFU_RS12965 0f22ff6f79cf8ff84345f43add274f19 563 Gene3D G3DSA:3.20.20.80 9 109 7.3E-126 T 21-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VFU_RS12965 0f22ff6f79cf8ff84345f43add274f19 563 PANTHER PTHR10357:SF170 456 560 4.2E-267 T 21-04-2016 VFU_RS12965 0f22ff6f79cf8ff84345f43add274f19 563 PANTHER PTHR10357:SF170 1 424 4.2E-267 T 21-04-2016 VFU_RS12965 0f22ff6f79cf8ff84345f43add274f19 563 SMART SM00642 18 419 2.5E-162 T 21-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VFU_RS12965 0f22ff6f79cf8ff84345f43add274f19 563 SUPERFAMILY SSF51011 480 559 1.2E-14 T 21-04-2016 VFU_RS12965 0f22ff6f79cf8ff84345f43add274f19 563 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 10 557 3.8E-263 T 21-04-2016 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 VFU_RS12965 0f22ff6f79cf8ff84345f43add274f19 563 Gene3D G3DSA:3.90.400.10 110 179 2.7E-30 T 21-04-2016 VFU_RS12965 0f22ff6f79cf8ff84345f43add274f19 563 Pfam PF00128 Alpha amylase, catalytic domain 33 375 5.9E-126 T 21-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VFU_RS12965 0f22ff6f79cf8ff84345f43add274f19 563 Pfam PF16657 Maltogenic Amylase, C-terminal domain 480 556 1.7E-6 T 21-04-2016 IPR032091 Maltogenic Amylase, C-terminal VFU_RS12965 0f22ff6f79cf8ff84345f43add274f19 563 PANTHER PTHR10357 456 560 4.2E-267 T 21-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 VFU_RS12965 0f22ff6f79cf8ff84345f43add274f19 563 PANTHER PTHR10357 1 424 4.2E-267 T 21-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 VFU_RS12965 0f22ff6f79cf8ff84345f43add274f19 563 Gene3D G3DSA:2.60.40.1180 481 559 4.9E-17 T 21-04-2016 IPR013780 Glycosyl hydrolase, all-beta VFU_RS05880 d85c173d07b62575147278a7e4b04de6 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.2E-41 T 21-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VFU_RS05880 d85c173d07b62575147278a7e4b04de6 377 Gene3D G3DSA:1.20.1330.10 279 332 1.3E-57 T 21-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VFU_RS05880 d85c173d07b62575147278a7e4b04de6 377 Gene3D G3DSA:1.20.1330.10 55 171 1.3E-57 T 21-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VFU_RS05880 d85c173d07b62575147278a7e4b04de6 377 Pfam PF07196 Flagellin hook IN motif 194 249 2.0E-12 T 21-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VFU_RS05880 d85c173d07b62575147278a7e4b04de6 377 SUPERFAMILY SSF64518 1 376 7.98E-95 T 21-04-2016 VFU_RS05880 d85c173d07b62575147278a7e4b04de6 377 PRINTS PR00207 Flagellin signature 37 54 2.5E-27 T 21-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VFU_RS05880 d85c173d07b62575147278a7e4b04de6 377 PRINTS PR00207 Flagellin signature 76 95 2.5E-27 T 21-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VFU_RS05880 d85c173d07b62575147278a7e4b04de6 377 PRINTS PR00207 Flagellin signature 111 134 2.5E-27 T 21-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VFU_RS05880 d85c173d07b62575147278a7e4b04de6 377 PANTHER PTHR30244:SF1 2 376 7.2E-169 T 21-04-2016 VFU_RS05880 d85c173d07b62575147278a7e4b04de6 377 PANTHER PTHR30244 2 376 7.2E-169 T 21-04-2016 VFU_RS05880 d85c173d07b62575147278a7e4b04de6 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 7.9E-26 T 21-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VFU_RS12095 235402b12eb5a6772d38646ab6743494 302 SUPERFAMILY SSF103642 280 300 6.05E-6 T 21-04-2016 VFU_RS12095 235402b12eb5a6772d38646ab6743494 302 Gene3D G3DSA:2.40.10.10 4 64 2.1E-5 T 21-04-2016 VFU_RS12095 235402b12eb5a6772d38646ab6743494 302 Gene3D G3DSA:2.40.10.10 133 199 1.6E-5 T 21-04-2016 VFU_RS12095 235402b12eb5a6772d38646ab6743494 302 Pfam PF13365 Trypsin-like peptidase domain 26 194 6.3E-7 T 21-04-2016 VFU_RS12095 235402b12eb5a6772d38646ab6743494 302 Gene3D G3DSA:3.10.450.50 271 299 6.1E-8 T 21-04-2016 IPR032710 NTF2-like domain VFU_RS12095 235402b12eb5a6772d38646ab6743494 302 SUPERFAMILY SSF50494 10 195 4.27E-12 T 21-04-2016 IPR009003 Peptidase S1, PA clan VFU_RS12095 235402b12eb5a6772d38646ab6743494 302 Pfam PF02810 SEC-C motif 284 299 3.6E-8 T 21-04-2016 IPR004027 SEC-C motif VFU_RS14030 63c2b9ecf01638e895d4efa015d36ae8 292 Hamap MF_00152 Probable endonuclease 4 [nfo]. 11 288 43.054 T 21-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 VFU_RS14030 63c2b9ecf01638e895d4efa015d36ae8 292 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 224 240 - T 21-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 VFU_RS14030 63c2b9ecf01638e895d4efa015d36ae8 292 PANTHER PTHR21445:SF0 9 291 1.9E-163 T 21-04-2016 VFU_RS14030 63c2b9ecf01638e895d4efa015d36ae8 292 Gene3D G3DSA:3.20.20.150 11 287 1.7E-122 T 21-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain VFU_RS14030 63c2b9ecf01638e895d4efa015d36ae8 292 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 12 285 2.0E-106 T 21-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 VFU_RS14030 63c2b9ecf01638e895d4efa015d36ae8 292 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 184 191 - T 21-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 VFU_RS14030 63c2b9ecf01638e895d4efa015d36ae8 292 SUPERFAMILY SSF51658 12 288 8.77E-102 T 21-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain VFU_RS14030 63c2b9ecf01638e895d4efa015d36ae8 292 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 78 86 - T 21-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 VFU_RS14030 63c2b9ecf01638e895d4efa015d36ae8 292 Pfam PF01261 Xylose isomerase-like TIM barrel 29 248 5.9E-44 T 21-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain VFU_RS14030 63c2b9ecf01638e895d4efa015d36ae8 292 PANTHER PTHR21445 9 291 1.9E-163 T 21-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 VFU_RS14030 63c2b9ecf01638e895d4efa015d36ae8 292 SMART SM00518 12 288 4.8E-120 T 21-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 VFU_RS04820 9e262c8e697dbe178128b31a0d11249c 147 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 8 144 1.7E-12 T 21-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 VFU_RS04820 9e262c8e697dbe178128b31a0d11249c 147 PANTHER PTHR10516 8 80 2.8E-14 T 21-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type VFU_RS04820 9e262c8e697dbe178128b31a0d11249c 147 PANTHER PTHR10516 136 147 2.8E-14 T 21-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type VFU_RS04820 9e262c8e697dbe178128b31a0d11249c 147 SUPERFAMILY SSF54534 8 146 3.14E-36 T 21-04-2016 VFU_RS04820 9e262c8e697dbe178128b31a0d11249c 147 Gene3D G3DSA:3.10.50.40 133 147 4.6E-19 T 21-04-2016 VFU_RS04820 9e262c8e697dbe178128b31a0d11249c 147 Gene3D G3DSA:3.10.50.40 7 83 4.6E-19 T 21-04-2016 VFU_RS04820 9e262c8e697dbe178128b31a0d11249c 147 PANTHER PTHR10516:SF329 8 80 2.8E-14 T 21-04-2016 VFU_RS04820 9e262c8e697dbe178128b31a0d11249c 147 PANTHER PTHR10516:SF329 136 147 2.8E-14 T 21-04-2016 VFU_RS02260 4ba89d9a8db6e74391c7aff9d52b6b75 181 PANTHER PTHR21392 1 177 2.0E-59 T 21-04-2016 VFU_RS02260 4ba89d9a8db6e74391c7aff9d52b6b75 181 SMART SM01144 1 174 4.8E-46 T 21-04-2016 IPR005636 DTW VFU_RS02260 4ba89d9a8db6e74391c7aff9d52b6b75 181 Pfam PF03942 DTW domain 6 166 1.2E-42 T 21-04-2016 IPR005636 DTW VFU_RS02260 4ba89d9a8db6e74391c7aff9d52b6b75 181 PANTHER PTHR21392:SF1 1 177 2.0E-59 T 21-04-2016 VFU_RS08380 0ab550b588a9dc3d8d6043a780f47526 233 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 65 225 1.0E-47 T 21-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VFU_RS08380 0ab550b588a9dc3d8d6043a780f47526 233 SUPERFAMILY SSF55174 1 80 3.83E-12 T 21-04-2016 VFU_RS08380 0ab550b588a9dc3d8d6043a780f47526 233 PANTHER PTHR21600:SF19 1 233 8.0E-70 T 21-04-2016 VFU_RS08380 0ab550b588a9dc3d8d6043a780f47526 233 Gene3D G3DSA:3.10.290.10 1 63 1.8E-18 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VFU_RS08380 0ab550b588a9dc3d8d6043a780f47526 233 SUPERFAMILY SSF55120 60 228 2.4E-43 T 21-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS08380 0ab550b588a9dc3d8d6043a780f47526 233 SMART SM00363 1 62 2.2E-6 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VFU_RS08380 0ab550b588a9dc3d8d6043a780f47526 233 Pfam PF00849 RNA pseudouridylate synthase 61 193 1.2E-16 T 21-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS08380 0ab550b588a9dc3d8d6043a780f47526 233 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 98 112 - T 21-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VFU_RS08380 0ab550b588a9dc3d8d6043a780f47526 233 Pfam PF01479 S4 domain 1 43 1.4E-8 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VFU_RS08380 0ab550b588a9dc3d8d6043a780f47526 233 PANTHER PTHR21600 1 233 8.0E-70 T 21-04-2016 VFU_RS09240 719ba5f14301232a308dc72b4dfaa91f 256 SUPERFAMILY SSF161098 4 254 4.02E-55 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS09240 719ba5f14301232a308dc72b4dfaa91f 256 PANTHER PTHR30222 1 256 8.2E-164 T 21-04-2016 VFU_RS09240 719ba5f14301232a308dc72b4dfaa91f 256 PANTHER PTHR30222:SF6 1 256 8.2E-164 T 21-04-2016 VFU_RS09240 719ba5f14301232a308dc72b4dfaa91f 256 Gene3D G3DSA:1.10.3720.10 3 254 1.5E-57 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS09240 719ba5f14301232a308dc72b4dfaa91f 256 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 250 2.6E-18 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS06550 ec79860b76e9c24aef0f525eea6d88b6 539 Gene3D G3DSA:3.30.1360.60 459 538 5.9E-24 T 21-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VFU_RS06550 ec79860b76e9c24aef0f525eea6d88b6 539 Pfam PF02378 Phosphotransferase system, EIIC 10 363 2.5E-76 T 21-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VFU_RS06550 ec79860b76e9c24aef0f525eea6d88b6 539 Pfam PF00367 phosphotransferase system, EIIB 463 495 8.1E-15 T 21-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VFU_RS06550 ec79860b76e9c24aef0f525eea6d88b6 539 PANTHER PTHR30009:SF2 3 537 2.5E-167 T 21-04-2016 VFU_RS06550 ec79860b76e9c24aef0f525eea6d88b6 539 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 427 523 1.5E-18 T 21-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VFU_RS06550 ec79860b76e9c24aef0f525eea6d88b6 539 SUPERFAMILY SSF55604 461 537 3.14E-17 T 21-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VFU_RS06550 ec79860b76e9c24aef0f525eea6d88b6 539 PANTHER PTHR30009 3 537 2.5E-167 T 21-04-2016 VFU_RS06550 ec79860b76e9c24aef0f525eea6d88b6 539 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 474 491 - T 21-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VFU_RS06090 e767d1a7a519a20104ef10701744b6c6 253 Gene3D G3DSA:3.40.50.1820 5 231 7.5E-40 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold VFU_RS06090 e767d1a7a519a20104ef10701744b6c6 253 PRINTS PR00111 Alpha/beta hydrolase fold signature 96 109 5.8E-6 T 21-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VFU_RS06090 e767d1a7a519a20104ef10701744b6c6 253 PRINTS PR00111 Alpha/beta hydrolase fold signature 82 95 5.8E-6 T 21-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VFU_RS06090 e767d1a7a519a20104ef10701744b6c6 253 PRINTS PR00111 Alpha/beta hydrolase fold signature 39 54 5.8E-6 T 21-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VFU_RS06090 e767d1a7a519a20104ef10701744b6c6 253 PRINTS PR00111 Alpha/beta hydrolase fold signature 199 213 5.8E-6 T 21-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VFU_RS06090 e767d1a7a519a20104ef10701744b6c6 253 SUPERFAMILY SSF53474 5 230 2.61E-41 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold VFU_RS06090 e767d1a7a519a20104ef10701744b6c6 253 Pfam PF00561 alpha/beta hydrolase fold 15 111 1.6E-19 T 21-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VFU_RS06090 e767d1a7a519a20104ef10701744b6c6 253 PANTHER PTHR10992:SF768 5 231 3.2E-63 T 21-04-2016 VFU_RS06090 e767d1a7a519a20104ef10701744b6c6 253 PANTHER PTHR10992 5 231 3.2E-63 T 21-04-2016 VFU_RS14510 da9ed9e061a07c93ffb92d3c45c6bf34 208 PANTHER PTHR11579 1 203 4.2E-84 T 21-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 VFU_RS14510 da9ed9e061a07c93ffb92d3c45c6bf34 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 38.665 T 21-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 VFU_RS14510 da9ed9e061a07c93ffb92d3c45c6bf34 208 Gene3D G3DSA:3.40.50.150 11 204 9.5E-63 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS14510 da9ed9e061a07c93ffb92d3c45c6bf34 208 SUPERFAMILY SSF53335 12 204 3.99E-46 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS14510 da9ed9e061a07c93ffb92d3c45c6bf34 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 21-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 VFU_RS14510 da9ed9e061a07c93ffb92d3c45c6bf34 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 7 204 9.7E-72 T 21-04-2016 VFU_RS14510 da9ed9e061a07c93ffb92d3c45c6bf34 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 6 206 6.0E-81 T 21-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 VFU_RS09695 c426b225941ab8c9be52afec7ee56474 148 Pfam PF05099 Tellurite resistance protein TerB 6 142 1.9E-38 T 21-04-2016 IPR007791 Co-chaperone DjlA, N-terminal VFU_RS09695 c426b225941ab8c9be52afec7ee56474 148 Gene3D G3DSA:1.10.3680.10 1 144 8.2E-26 T 21-04-2016 IPR029024 TerB-like VFU_RS09695 c426b225941ab8c9be52afec7ee56474 148 SUPERFAMILY SSF158682 1 146 1.83E-31 T 21-04-2016 IPR029024 TerB-like VFU_RS03445 745f6d57644a93a8dddcc0168dd9b800 195 PANTHER PTHR24567:SF33 36 195 8.1E-15 T 21-04-2016 VFU_RS03445 745f6d57644a93a8dddcc0168dd9b800 195 Pfam PF00027 Cyclic nucleotide-binding domain 37 120 3.2E-10 T 21-04-2016 IPR000595 Cyclic nucleotide-binding domain VFU_RS03445 745f6d57644a93a8dddcc0168dd9b800 195 SUPERFAMILY SSF51206 24 146 3.14E-20 T 21-04-2016 IPR018490 Cyclic nucleotide-binding-like VFU_RS03445 745f6d57644a93a8dddcc0168dd9b800 195 Gene3D G3DSA:2.60.120.10 13 157 2.1E-27 T 21-04-2016 IPR014710 RmlC-like jelly roll fold VFU_RS03445 745f6d57644a93a8dddcc0168dd9b800 195 PANTHER PTHR24567 36 195 8.1E-15 T 21-04-2016 VFU_RS06975 ad82c3b38729db9a5a494cce6f9bff58 274 SUPERFAMILY SSF103088 124 253 2.49E-28 T 21-04-2016 IPR006665 OmpA-like domain VFU_RS06975 ad82c3b38729db9a5a494cce6f9bff58 274 PANTHER PTHR30128 150 267 2.5E-32 T 21-04-2016 VFU_RS06975 ad82c3b38729db9a5a494cce6f9bff58 274 Pfam PF00691 OmpA family 151 247 1.0E-18 T 21-04-2016 IPR006665 OmpA-like domain VFU_RS06975 ad82c3b38729db9a5a494cce6f9bff58 274 PRINTS PR01021 OMPA domain signature 198 214 1.4E-5 T 21-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VFU_RS06975 ad82c3b38729db9a5a494cce6f9bff58 274 PRINTS PR01021 OMPA domain signature 152 174 1.4E-5 T 21-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VFU_RS06975 ad82c3b38729db9a5a494cce6f9bff58 274 PRINTS PR01021 OMPA domain signature 183 198 1.4E-5 T 21-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VFU_RS06975 ad82c3b38729db9a5a494cce6f9bff58 274 Gene3D G3DSA:3.30.1330.60 146 254 1.3E-28 T 21-04-2016 IPR006665 OmpA-like domain VFU_RS06975 ad82c3b38729db9a5a494cce6f9bff58 274 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 52 70 1.7E-14 T 21-04-2016 VFU_RS06975 ad82c3b38729db9a5a494cce6f9bff58 274 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 14 32 1.7E-14 T 21-04-2016 VFU_RS06975 ad82c3b38729db9a5a494cce6f9bff58 274 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 198 215 1.7E-14 T 21-04-2016 VFU_RS06975 ad82c3b38729db9a5a494cce6f9bff58 274 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 216 235 1.7E-14 T 21-04-2016 VFU_RS06975 ad82c3b38729db9a5a494cce6f9bff58 274 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 236 256 1.7E-14 T 21-04-2016 VFU_RS06975 ad82c3b38729db9a5a494cce6f9bff58 274 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 169 195 1.7E-14 T 21-04-2016 VFU_RS07170 283f5a22d9b664e05e607e78810fd12e 255 Pfam PF13247 4Fe-4S dicluster domain 101 196 2.4E-29 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VFU_RS07170 283f5a22d9b664e05e607e78810fd12e 255 Gene3D G3DSA:3.30.70.20 52 120 1.5E-10 T 21-04-2016 VFU_RS07170 283f5a22d9b664e05e607e78810fd12e 255 PANTHER PTHR11938:SF86 43 249 2.4E-80 T 21-04-2016 VFU_RS07170 283f5a22d9b664e05e607e78810fd12e 255 Gene3D G3DSA:3.30.70.20 161 246 8.7E-28 T 21-04-2016 VFU_RS07170 283f5a22d9b664e05e607e78810fd12e 255 Gene3D G3DSA:3.30.70.20 121 160 4.9E-23 T 21-04-2016 VFU_RS07170 283f5a22d9b664e05e607e78810fd12e 255 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 141 152 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VFU_RS07170 283f5a22d9b664e05e607e78810fd12e 255 SUPERFAMILY SSF54862 47 231 1.15E-65 T 21-04-2016 VFU_RS07170 283f5a22d9b664e05e607e78810fd12e 255 PANTHER PTHR11938 43 249 2.4E-80 T 21-04-2016 VFU_RS08120 9cdfccfbe6b6f00b9685b46fb2940b2d 255 Pfam PF11150 Protein of unknown function (DUF2927) 26 226 1.8E-65 T 21-04-2016 IPR021323 Protein of unknown function DUF2927 VFU_RS11160 f8c5bc29414e3b34a9c77ec5fcdcbc93 464 SUPERFAMILY SSF103473 16 423 6.93E-37 T 21-04-2016 IPR020846 Major facilitator superfamily domain VFU_RS11160 f8c5bc29414e3b34a9c77ec5fcdcbc93 464 Gene3D G3DSA:1.20.1250.20 19 212 3.4E-19 T 21-04-2016 VFU_RS11160 f8c5bc29414e3b34a9c77ec5fcdcbc93 464 Gene3D G3DSA:1.20.1250.20 226 429 5.5E-10 T 21-04-2016 VFU_RS11160 f8c5bc29414e3b34a9c77ec5fcdcbc93 464 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 11 440 3.0E-108 T 21-04-2016 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 VFU_RS11160 f8c5bc29414e3b34a9c77ec5fcdcbc93 464 PANTHER PTHR11328:SF24 1 438 4.3E-129 T 21-04-2016 VFU_RS11160 f8c5bc29414e3b34a9c77ec5fcdcbc93 464 Pfam PF13347 MFS/sugar transport protein 13 432 8.7E-105 T 21-04-2016 VFU_RS11160 f8c5bc29414e3b34a9c77ec5fcdcbc93 464 PANTHER PTHR11328 1 438 4.3E-129 T 21-04-2016 VFU_RS11985 78663da0ecb19e83a5ffdf83b06a59d3 87 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 87 18.783 T 21-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 VFU_RS11985 78663da0ecb19e83a5ffdf83b06a59d3 87 PANTHER PTHR33404 1 85 1.8E-29 T 21-04-2016 VFU_RS11985 78663da0ecb19e83a5ffdf83b06a59d3 87 Pfam PF03776 Septum formation topological specificity factor MinE 14 83 5.3E-23 T 21-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 VFU_RS11985 78663da0ecb19e83a5ffdf83b06a59d3 87 Gene3D G3DSA:3.30.1070.10 33 86 9.4E-22 T 21-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 VFU_RS11985 78663da0ecb19e83a5ffdf83b06a59d3 87 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 84 7.0E-34 T 21-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 VFU_RS11985 78663da0ecb19e83a5ffdf83b06a59d3 87 SUPERFAMILY SSF55229 33 85 1.7E-16 T 21-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 VFU_RS13575 c86cbb263f357735e19ee28f548cc173 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 20 40 9.7E-16 T 21-04-2016 IPR003849 Preprotein translocase YajC VFU_RS13575 c86cbb263f357735e19ee28f548cc173 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 58 76 9.7E-16 T 21-04-2016 IPR003849 Preprotein translocase YajC VFU_RS13575 c86cbb263f357735e19ee28f548cc173 110 SMART SM01323 18 102 9.8E-38 T 21-04-2016 IPR003849 Preprotein translocase YajC VFU_RS13575 c86cbb263f357735e19ee28f548cc173 110 PANTHER PTHR33909:SF1 1 110 6.6E-34 T 21-04-2016 VFU_RS13575 c86cbb263f357735e19ee28f548cc173 110 Pfam PF02699 Preprotein translocase subunit 22 99 2.0E-25 T 21-04-2016 IPR003849 Preprotein translocase YajC VFU_RS13575 c86cbb263f357735e19ee28f548cc173 110 PANTHER PTHR33909 1 110 6.6E-34 T 21-04-2016 VFU_RS13575 c86cbb263f357735e19ee28f548cc173 110 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 20 102 3.3E-29 T 21-04-2016 IPR003849 Preprotein translocase YajC VFU_RS00050 d0d89b3a5a04eec18c625da3576d09ae 75 Gene3D G3DSA:1.20.5.300 7 55 1.5E-22 T 21-04-2016 VFU_RS00050 d0d89b3a5a04eec18c625da3576d09ae 75 Hamap MF_00715 Protein SlyX [slyX]. 8 75 16.981 T 21-04-2016 IPR007236 SlyX VFU_RS00050 d0d89b3a5a04eec18c625da3576d09ae 75 Pfam PF04102 SlyX 11 75 9.6E-24 T 21-04-2016 IPR007236 SlyX VFU_RS00050 d0d89b3a5a04eec18c625da3576d09ae 75 PANTHER PTHR36508 4 75 1.2E-25 T 21-04-2016 VFU_RS08315 0fa620480a1227d362ed63da3c7360b2 294 PANTHER PTHR30514 12 200 2.9E-16 T 21-04-2016 VFU_RS08315 0fa620480a1227d362ed63da3c7360b2 294 SUPERFAMILY SSF46689 10 81 6.09E-14 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS08315 0fa620480a1227d362ed63da3c7360b2 294 Gene3D G3DSA:3.40.50.10490 117 275 9.1E-17 T 21-04-2016 VFU_RS08315 0fa620480a1227d362ed63da3c7360b2 294 PANTHER PTHR30514:SF4 12 200 2.9E-16 T 21-04-2016 VFU_RS08315 0fa620480a1227d362ed63da3c7360b2 294 Gene3D G3DSA:1.10.10.10 11 79 7.9E-16 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS08315 0fa620480a1227d362ed63da3c7360b2 294 Pfam PF01418 Helix-turn-helix domain, rpiR family 11 79 2.9E-12 T 21-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 VFU_RS08315 0fa620480a1227d362ed63da3c7360b2 294 SUPERFAMILY SSF53697 108 264 5.34E-14 T 21-04-2016 VFU_RS09730 24c936d5513fcd681c4c791de1472fe8 380 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 222 377 2.6E-45 T 21-04-2016 IPR000160 GGDEF domain VFU_RS09730 24c936d5513fcd681c4c791de1472fe8 380 SUPERFAMILY SSF55073 229 377 1.65E-40 T 21-04-2016 IPR029787 Nucleotide cyclase VFU_RS09730 24c936d5513fcd681c4c791de1472fe8 380 SMART SM00267 212 379 1.4E-47 T 21-04-2016 IPR000160 GGDEF domain VFU_RS09730 24c936d5513fcd681c4c791de1472fe8 380 PANTHER PTHR10799:SF710 193 375 9.4E-22 T 21-04-2016 VFU_RS09730 24c936d5513fcd681c4c791de1472fe8 380 PANTHER PTHR10799 193 375 9.4E-22 T 21-04-2016 VFU_RS09730 24c936d5513fcd681c4c791de1472fe8 380 Pfam PF00990 Diguanylate cyclase, GGDEF domain 224 375 2.7E-40 T 21-04-2016 IPR000160 GGDEF domain VFU_RS09730 24c936d5513fcd681c4c791de1472fe8 380 Gene3D G3DSA:3.30.70.270 226 377 1.0E-47 T 21-04-2016 VFU_RS05010 7887961a4b44ae1201339128efb42cc7 303 Pfam PF01738 Dienelactone hydrolase family 92 301 9.1E-49 T 21-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 VFU_RS05010 7887961a4b44ae1201339128efb42cc7 303 PANTHER PTHR17630 11 302 1.6E-67 T 21-04-2016 VFU_RS05010 7887961a4b44ae1201339128efb42cc7 303 SUPERFAMILY SSF53474 76 302 1.58E-44 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold VFU_RS05010 7887961a4b44ae1201339128efb42cc7 303 PANTHER PTHR17630:SF32 11 302 1.6E-67 T 21-04-2016 VFU_RS05010 7887961a4b44ae1201339128efb42cc7 303 Gene3D G3DSA:3.40.50.1820 78 302 1.8E-55 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold VFU_RS03545 c78bf72c717005f07de8bf74bc6db313 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 21-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 VFU_RS03545 c78bf72c717005f07de8bf74bc6db313 176 Pfam PF00719 Inorganic pyrophosphatase 18 173 1.5E-51 T 21-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 VFU_RS03545 c78bf72c717005f07de8bf74bc6db313 176 Gene3D G3DSA:3.90.80.10 4 175 6.7E-59 T 21-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 VFU_RS03545 c78bf72c717005f07de8bf74bc6db313 176 PANTHER PTHR10286 5 175 1.9E-76 T 21-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 VFU_RS03545 c78bf72c717005f07de8bf74bc6db313 176 SUPERFAMILY SSF50324 3 174 1.57E-65 T 21-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 VFU_RS03545 c78bf72c717005f07de8bf74bc6db313 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.236 T 21-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 VFU_RS01480 61a2b87afbbf6aa006a4eda6187052e9 214 PANTHER PTHR20855 10 213 1.3E-74 T 21-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 VFU_RS01480 61a2b87afbbf6aa006a4eda6187052e9 214 Pfam PF03006 Haemolysin-III related 6 204 1.5E-39 T 21-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 VFU_RS01480 61a2b87afbbf6aa006a4eda6187052e9 214 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 10 211 1.3E-70 T 21-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 VFU_RS01480 61a2b87afbbf6aa006a4eda6187052e9 214 PANTHER PTHR20855:SF3 10 213 1.3E-74 T 21-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 VFU_RS14130 f0aaa09c38ec87c69780a9032887783f 271 PANTHER PTHR30535 20 266 1.2E-54 T 21-04-2016 VFU_RS14130 f0aaa09c38ec87c69780a9032887783f 271 Gene3D G3DSA:3.40.50.1980 20 138 4.4E-30 T 21-04-2016 VFU_RS14130 f0aaa09c38ec87c69780a9032887783f 271 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 1 270 50.211 T 21-04-2016 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 VFU_RS14130 f0aaa09c38ec87c69780a9032887783f 271 Pfam PF01497 Periplasmic binding protein 24 245 2.2E-30 T 21-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 VFU_RS14130 f0aaa09c38ec87c69780a9032887783f 271 SUPERFAMILY SSF53807 20 266 1.33E-60 T 21-04-2016 VFU_RS14130 f0aaa09c38ec87c69780a9032887783f 271 Gene3D G3DSA:3.40.50.1980 142 267 5.7E-38 T 21-04-2016 VFU_RS05460 e26f336bc51d1c3db90d84bab1b43501 475 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 3 464 33.66 T 21-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 VFU_RS05460 e26f336bc51d1c3db90d84bab1b43501 475 Gene3D G3DSA:3.90.800.10 68 183 7.1E-36 T 21-04-2016 VFU_RS05460 e26f336bc51d1c3db90d84bab1b43501 475 Gene3D G3DSA:1.10.10.350 366 464 4.5E-31 T 21-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 VFU_RS05460 e26f336bc51d1c3db90d84bab1b43501 475 PANTHER PTHR11451 3 318 7.3E-102 T 21-04-2016 VFU_RS05460 e26f336bc51d1c3db90d84bab1b43501 475 PANTHER PTHR11451:SF41 3 318 7.3E-102 T 21-04-2016 VFU_RS05460 e26f336bc51d1c3db90d84bab1b43501 475 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 308 2.6E-115 T 21-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 VFU_RS05460 e26f336bc51d1c3db90d84bab1b43501 475 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 466 3.9E-193 T 21-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 VFU_RS05460 e26f336bc51d1c3db90d84bab1b43501 475 Gene3D G3DSA:3.40.50.620 184 233 1.6E-53 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VFU_RS05460 e26f336bc51d1c3db90d84bab1b43501 475 Gene3D G3DSA:3.40.50.620 2 67 1.6E-53 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VFU_RS05460 e26f336bc51d1c3db90d84bab1b43501 475 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 21-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VFU_RS05460 e26f336bc51d1c3db90d84bab1b43501 475 Gene3D G3DSA:1.10.1160.10 236 316 3.1E-36 T 21-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 VFU_RS05460 e26f336bc51d1c3db90d84bab1b43501 475 SUPERFAMILY SSF48163 302 464 7.59E-47 T 21-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 VFU_RS05460 e26f336bc51d1c3db90d84bab1b43501 475 SUPERFAMILY SSF52374 3 301 1.58E-108 T 21-04-2016 VFU_RS05460 e26f336bc51d1c3db90d84bab1b43501 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 192 9.8E-28 T 21-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VFU_RS05460 e26f336bc51d1c3db90d84bab1b43501 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 9.8E-28 T 21-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VFU_RS05460 e26f336bc51d1c3db90d84bab1b43501 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 9.8E-28 T 21-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VFU_RS05460 e26f336bc51d1c3db90d84bab1b43501 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 198 206 9.8E-28 T 21-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VFU_RS05460 e26f336bc51d1c3db90d84bab1b43501 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 9.8E-28 T 21-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VFU_RS05490 d305807babb0852ecef2a3d9bb47c765 144 Pfam PF02169 LPP20 lipoprotein 27 119 2.0E-9 T 21-04-2016 IPR024952 Lipoprotein LPP20-like VFU_RS05490 d305807babb0852ecef2a3d9bb47c765 144 PIRSF PIRSF028687 1 144 2.0E-61 T 21-04-2016 IPR007293 Flagellar protein FlgP VFU_RS15015 02bfaea0e181c3768fbde98fa5e01213 253 PANTHER PTHR34390 1 253 8.0E-140 T 21-04-2016 VFU_RS15015 02bfaea0e181c3768fbde98fa5e01213 253 Pfam PF06738 Putative threonine/serine exporter 10 247 1.4E-70 T 21-04-2016 IPR010619 Putative threonine/serine exporter VFU_RS15015 02bfaea0e181c3768fbde98fa5e01213 253 PANTHER PTHR34390:SF2 1 253 8.0E-140 T 21-04-2016 VFU_RS15010 854874777e4e08052df416d874f2d944 157 PANTHER PTHR34390 1 157 1.6E-47 T 21-04-2016 VFU_RS15010 854874777e4e08052df416d874f2d944 157 Pfam PF12821 Threonine/Serine exporter, ThrE 13 147 5.6E-35 T 21-04-2016 IPR024528 Threonine/Serine exporter, ThrE VFU_RS14890 474895e179127652418508b763d4c366 239 PANTHER PTHR23417 7 237 7.5E-87 T 21-04-2016 VFU_RS14890 474895e179127652418508b763d4c366 239 Gene3D G3DSA:3.40.50.150 60 205 3.5E-13 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS14890 474895e179127652418508b763d4c366 239 Pfam PF02390 Putative methyltransferase 62 232 8.6E-59 T 21-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 VFU_RS14890 474895e179127652418508b763d4c366 239 PANTHER PTHR23417:SF14 7 237 7.5E-87 T 21-04-2016 VFU_RS14890 474895e179127652418508b763d4c366 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 47 238 6.7E-68 T 21-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 VFU_RS14890 474895e179127652418508b763d4c366 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 23 238 30.452 T 21-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 VFU_RS14890 474895e179127652418508b763d4c366 239 SUPERFAMILY SSF53335 16 238 6.72E-36 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS12795 f76fac36a24b2a9cc73ac4832cd7e308 573 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 21-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 VFU_RS12795 f76fac36a24b2a9cc73ac4832cd7e308 573 SUPERFAMILY SSF52009 125 243 1.96E-34 T 21-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VFU_RS12795 f76fac36a24b2a9cc73ac4832cd7e308 573 Gene3D G3DSA:3.50.30.10 133 254 3.7E-38 T 21-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VFU_RS12795 f76fac36a24b2a9cc73ac4832cd7e308 573 Gene3D G3DSA:3.20.20.60 255 570 1.4E-112 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VFU_RS12795 f76fac36a24b2a9cc73ac4832cd7e308 573 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 1.1E-20 T 21-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VFU_RS12795 f76fac36a24b2a9cc73ac4832cd7e308 573 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 21-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 VFU_RS12795 f76fac36a24b2a9cc73ac4832cd7e308 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 2.6E-30 T 21-04-2016 VFU_RS12795 f76fac36a24b2a9cc73ac4832cd7e308 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 2.6E-30 T 21-04-2016 VFU_RS12795 f76fac36a24b2a9cc73ac4832cd7e308 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 2.6E-30 T 21-04-2016 VFU_RS12795 f76fac36a24b2a9cc73ac4832cd7e308 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 2.6E-30 T 21-04-2016 VFU_RS12795 f76fac36a24b2a9cc73ac4832cd7e308 573 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 541 4.7E-123 T 21-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 VFU_RS12795 f76fac36a24b2a9cc73ac4832cd7e308 573 Gene3D G3DSA:1.10.274.10 23 132 8.7E-37 T 21-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VFU_RS12795 f76fac36a24b2a9cc73ac4832cd7e308 573 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 5.4E-32 T 21-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VFU_RS12795 f76fac36a24b2a9cc73ac4832cd7e308 573 PIRSF PIRSF000732 1 573 3.4E-218 T 21-04-2016 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 VFU_RS12795 f76fac36a24b2a9cc73ac4832cd7e308 573 SUPERFAMILY SSF51621 249 549 1.1E-109 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VFU_RS12795 f76fac36a24b2a9cc73ac4832cd7e308 573 PANTHER PTHR22931 66 550 5.9E-213 T 21-04-2016 VFU_RS12795 f76fac36a24b2a9cc73ac4832cd7e308 573 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 565 3.1E-247 T 21-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 VFU_RS12795 f76fac36a24b2a9cc73ac4832cd7e308 573 SUPERFAMILY SSF47831 24 143 2.48E-32 T 21-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VFU_RS01850 4c42bd140d51696eee9c359a9335657a 485 PIRSF PIRSF006247 1 485 2.2E-177 T 21-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 VFU_RS01850 4c42bd140d51696eee9c359a9335657a 485 PANTHER PTHR32024:SF2 1 484 5.1E-269 T 21-04-2016 VFU_RS01850 4c42bd140d51696eee9c359a9335657a 485 PANTHER PTHR32024 1 484 5.1E-269 T 21-04-2016 VFU_RS01850 4c42bd140d51696eee9c359a9335657a 485 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 468 2.0E-119 T 21-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 VFU_RS01850 4c42bd140d51696eee9c359a9335657a 485 Pfam PF02386 Cation transport protein 39 477 2.1E-89 T 21-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 VFU_RS07885 b6534bd583bd06662ca90092ce79a394 106 PANTHER PTHR33473 6 106 2.1E-42 T 21-04-2016 VFU_RS07885 b6534bd583bd06662ca90092ce79a394 106 Gene3D G3DSA:3.30.1390.10 4 106 1.3E-43 T 21-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VFU_RS07885 b6534bd583bd06662ca90092ce79a394 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 23 102 5.1E-33 T 21-04-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 VFU_RS07885 b6534bd583bd06662ca90092ce79a394 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 12 101 27.719 T 21-04-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS VFU_RS07885 b6534bd583bd06662ca90092ce79a394 106 SUPERFAMILY SSF54736 22 105 1.05E-31 T 21-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VFU_RS13620 b11598237ed97ad8861ab486b2d267be 250 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 3 247 40.971 T 21-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 VFU_RS13620 b11598237ed97ad8861ab486b2d267be 250 Gene3D G3DSA:3.20.20.380 4 247 2.6E-92 T 21-04-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 VFU_RS13620 b11598237ed97ad8861ab486b2d267be 250 PANTHER PTHR12598 1 250 4.9E-99 T 21-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 VFU_RS13620 b11598237ed97ad8861ab486b2d267be 250 SUPERFAMILY SSF110395 4 247 3.66E-74 T 21-04-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 VFU_RS13620 b11598237ed97ad8861ab486b2d267be 250 Pfam PF03932 CutC family 4 205 5.8E-85 T 21-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 VFU_RS13620 b11598237ed97ad8861ab486b2d267be 250 PANTHER PTHR12598:SF0 1 250 4.9E-99 T 21-04-2016 VFU_RS01935 9911a2e4af1b073f1ead988b6802bd1c 256 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 43.485 T 21-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 VFU_RS01935 9911a2e4af1b073f1ead988b6802bd1c 256 SUPERFAMILY SSF110399 1 236 1.01E-85 T 21-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 VFU_RS01935 9911a2e4af1b073f1ead988b6802bd1c 256 Pfam PF05690 Thiazole biosynthesis protein ThiG 4 247 1.7E-112 T 21-04-2016 VFU_RS01935 9911a2e4af1b073f1ead988b6802bd1c 256 Gene3D G3DSA:3.20.20.70 2 252 1.3E-62 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS01935 9911a2e4af1b073f1ead988b6802bd1c 256 PANTHER PTHR34266 1 254 8.0E-157 T 21-04-2016 VFU_RS07135 4c0207a9adf5cac65451199fbe3d5720 371 Gene3D G3DSA:3.40.50.2000 58 197 5.4E-15 T 21-04-2016 VFU_RS07135 4c0207a9adf5cac65451199fbe3d5720 371 SUPERFAMILY SSF53756 57 359 4.71E-36 T 21-04-2016 VFU_RS07135 4c0207a9adf5cac65451199fbe3d5720 371 Gene3D G3DSA:3.40.50.2000 234 347 5.0E-16 T 21-04-2016 VFU_RS07135 4c0207a9adf5cac65451199fbe3d5720 371 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 129 346 2.0E-13 T 21-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 VFU_RS07135 4c0207a9adf5cac65451199fbe3d5720 371 PANTHER PTHR30160:SF1 54 341 2.1E-17 T 21-04-2016 VFU_RS07135 4c0207a9adf5cac65451199fbe3d5720 371 PANTHER PTHR30160 54 341 2.1E-17 T 21-04-2016 VFU_RS07870 a3a3f6acf8f3d35fd3f870d0c0ef96df 399 Pfam PF07690 Major Facilitator Superfamily 4 345 1.1E-29 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VFU_RS07870 a3a3f6acf8f3d35fd3f870d0c0ef96df 399 PANTHER PTHR11360 1 398 1.8E-69 T 21-04-2016 VFU_RS07870 a3a3f6acf8f3d35fd3f870d0c0ef96df 399 Gene3D G3DSA:1.20.1250.20 3 165 7.6E-16 T 21-04-2016 VFU_RS07870 a3a3f6acf8f3d35fd3f870d0c0ef96df 399 SUPERFAMILY SSF103473 3 380 1.31E-47 T 21-04-2016 IPR020846 Major facilitator superfamily domain VFU_RS07870 a3a3f6acf8f3d35fd3f870d0c0ef96df 399 PANTHER PTHR11360:SF135 1 398 1.8E-69 T 21-04-2016 VFU_RS07870 a3a3f6acf8f3d35fd3f870d0c0ef96df 399 Gene3D G3DSA:1.20.1250.20 203 380 1.7E-18 T 21-04-2016 VFU_RS01335 1d7bc47fef637a17c65ecf333379e945 368 SUPERFAMILY SSF111369 59 273 4.45E-40 T 21-04-2016 VFU_RS01335 1d7bc47fef637a17c65ecf333379e945 368 Gene3D G3DSA:2.40.50.100 163 194 4.2E-14 T 21-04-2016 VFU_RS01335 1d7bc47fef637a17c65ecf333379e945 368 Gene3D G3DSA:2.40.50.100 70 102 4.2E-14 T 21-04-2016 VFU_RS01335 1d7bc47fef637a17c65ecf333379e945 368 PANTHER PTHR30469:SF11 1 364 6.3E-149 T 21-04-2016 VFU_RS01335 1d7bc47fef637a17c65ecf333379e945 368 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 67 269 2.6E-28 T 21-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VFU_RS01335 1d7bc47fef637a17c65ecf333379e945 368 PANTHER PTHR30469 1 364 6.3E-149 T 21-04-2016 VFU_RS01335 1d7bc47fef637a17c65ecf333379e945 368 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 45 353 1.4E-73 T 21-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 VFU_RS01490 98eef6be47d1a24578092f748b83ffba 88 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 3.0E-35 T 21-04-2016 IPR009383 Protein of unknown function DUF1040 VFU_RS01490 98eef6be47d1a24578092f748b83ffba 88 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 4.6E-44 T 21-04-2016 IPR009383 Protein of unknown function DUF1040 VFU_RS11895 a0b01aee6c9b792b6f43adb5852b03ed 144 Gene3D G3DSA:3.10.129.10 5 139 2.6E-42 T 21-04-2016 IPR029069 HotDog domain VFU_RS11895 a0b01aee6c9b792b6f43adb5852b03ed 144 SUPERFAMILY SSF54637 6 137 7.67E-33 T 21-04-2016 IPR029069 HotDog domain VFU_RS11895 a0b01aee6c9b792b6f43adb5852b03ed 144 PANTHER PTHR31793 2 137 2.3E-44 T 21-04-2016 VFU_RS11895 a0b01aee6c9b792b6f43adb5852b03ed 144 PANTHER PTHR31793:SF1 2 137 2.3E-44 T 21-04-2016 VFU_RS11895 a0b01aee6c9b792b6f43adb5852b03ed 144 Pfam PF13279 Thioesterase-like superfamily 16 136 7.1E-21 T 21-04-2016 VFU_RS12980 87ad7eea3f4fc02a731d4965af8396d4 112 SUPERFAMILY SSF141488 34 111 6.8E-12 T 21-04-2016 IPR018660 C-type lysozyme, inhibitor VFU_RS12980 87ad7eea3f4fc02a731d4965af8396d4 112 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 37 108 2.7E-17 T 21-04-2016 IPR018660 C-type lysozyme, inhibitor VFU_RS09400 c759157c788e5e5e1147d6d63d940486 547 SUPERFAMILY SSF54211 314 506 1.14E-35 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VFU_RS09400 c759157c788e5e5e1147d6d63d940486 547 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 427 446 2.2E-11 T 21-04-2016 VFU_RS09400 c759157c788e5e5e1147d6d63d940486 547 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 397 416 2.2E-11 T 21-04-2016 VFU_RS09400 c759157c788e5e5e1147d6d63d940486 547 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 314 330 2.2E-11 T 21-04-2016 VFU_RS09400 c759157c788e5e5e1147d6d63d940486 547 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 457 475 2.2E-11 T 21-04-2016 VFU_RS09400 c759157c788e5e5e1147d6d63d940486 547 Gene3D G3DSA:3.30.230.10 306 506 1.3E-33 T 21-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VFU_RS09400 c759157c788e5e5e1147d6d63d940486 547 Pfam PF13654 AAA domain 75 288 1.0E-20 T 21-04-2016 VFU_RS09400 c759157c788e5e5e1147d6d63d940486 547 PANTHER PTHR10046 1 511 5.7E-145 T 21-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 VFU_RS09400 c759157c788e5e5e1147d6d63d940486 547 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 400 505 1.2E-10 T 21-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 VFU_RS09400 c759157c788e5e5e1147d6d63d940486 547 PANTHER PTHR10046:SF49 1 511 5.7E-145 T 21-04-2016 VFU_RS15005 199bac70ec1c56a1ca32da9daf2ee506 159 PIRSF PIRSF000194 1 159 2.7E-63 T 21-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 VFU_RS15005 199bac70ec1c56a1ca32da9daf2ee506 159 PRINTS PR00070 Dihydrofolate reductase signature 92 106 3.0E-14 T 21-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 VFU_RS15005 199bac70ec1c56a1ca32da9daf2ee506 159 PRINTS PR00070 Dihydrofolate reductase signature 28 36 3.0E-14 T 21-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 VFU_RS15005 199bac70ec1c56a1ca32da9daf2ee506 159 PRINTS PR00070 Dihydrofolate reductase signature 41 52 3.0E-14 T 21-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 VFU_RS15005 199bac70ec1c56a1ca32da9daf2ee506 159 PRINTS PR00070 Dihydrofolate reductase signature 14 24 3.0E-14 T 21-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 VFU_RS15005 199bac70ec1c56a1ca32da9daf2ee506 159 Gene3D G3DSA:3.40.430.10 1 159 5.6E-60 T 21-04-2016 IPR024072 Dihydrofolate reductase-like domain VFU_RS15005 199bac70ec1c56a1ca32da9daf2ee506 159 Pfam PF00186 Dihydrofolate reductase 3 159 3.2E-61 T 21-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 VFU_RS15005 199bac70ec1c56a1ca32da9daf2ee506 159 SUPERFAMILY SSF53597 1 159 9.97E-57 T 21-04-2016 IPR024072 Dihydrofolate reductase-like domain VFU_RS15005 199bac70ec1c56a1ca32da9daf2ee506 159 PANTHER PTHR22778:SF16 1 159 8.1E-43 T 21-04-2016 VFU_RS15005 199bac70ec1c56a1ca32da9daf2ee506 159 PANTHER PTHR22778 1 159 8.1E-43 T 21-04-2016 VFU_RS03890 af97aa0942cfb91795339ee32992ff34 144 SUPERFAMILY SSF56349 17 143 9.65E-6 T 21-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VFU_RS03890 af97aa0942cfb91795339ee32992ff34 144 Pfam PF12834 Phage integrase, N-terminal 13 91 2.5E-16 T 21-04-2016 IPR024457 Putative integrase, N-terminal VFU_RS06845 6ef39035b63532061277f8c45a9c6a07 435 PANTHER PTHR33362 9 435 3.9E-170 T 21-04-2016 VFU_RS06845 6ef39035b63532061277f8c45a9c6a07 435 PANTHER PTHR33362:SF2 9 435 3.9E-170 T 21-04-2016 VFU_RS06845 6ef39035b63532061277f8c45a9c6a07 435 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 423 1.3E-112 T 21-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VFU_RS06845 6ef39035b63532061277f8c45a9c6a07 435 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 22 428 7.9E-126 T 21-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 VFU_RS06845 6ef39035b63532061277f8c45a9c6a07 435 PIRSF PIRSF006066 6 434 5.4E-153 T 21-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 VFU_RS04765 5e7cdf31dacd2677daaf2862c920ed92 264 Pfam PF01925 Sulfite exporter TauE/SafE 9 261 1.3E-48 T 21-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 VFU_RS04765 5e7cdf31dacd2677daaf2862c920ed92 264 PANTHER PTHR30269:SF18 1 264 4.2E-113 T 21-04-2016 VFU_RS04765 5e7cdf31dacd2677daaf2862c920ed92 264 PANTHER PTHR30269 1 264 4.2E-113 T 21-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 VFU_RS07685 18a609f41e5ff1f9de1175ab8cd8b276 454 Pfam PF13379 NMT1-like family 28 308 1.1E-107 T 21-04-2016 VFU_RS07685 18a609f41e5ff1f9de1175ab8cd8b276 454 SUPERFAMILY SSF53850 34 126 1.55E-21 T 21-04-2016 VFU_RS07685 18a609f41e5ff1f9de1175ab8cd8b276 454 SUPERFAMILY SSF53850 159 335 1.55E-21 T 21-04-2016 VFU_RS07685 18a609f41e5ff1f9de1175ab8cd8b276 454 PANTHER PTHR30024:SF7 163 433 2.5E-132 T 21-04-2016 VFU_RS07685 18a609f41e5ff1f9de1175ab8cd8b276 454 PANTHER PTHR30024:SF7 24 133 2.5E-132 T 21-04-2016 VFU_RS07685 18a609f41e5ff1f9de1175ab8cd8b276 454 PANTHER PTHR30024 163 433 2.5E-132 T 21-04-2016 VFU_RS07685 18a609f41e5ff1f9de1175ab8cd8b276 454 PANTHER PTHR30024 24 133 2.5E-132 T 21-04-2016 VFU_RS22775 b43331824a17e1d536fa23d669a0b461 157 Pfam PF10711 Hypothetical protein (DUF2513) 14 135 1.4E-24 T 21-04-2016 IPR019650 Protein of unknown function DUF2513 VFU_RS13540 ec1fdd1e13a242f9b033138c7e50a8e6 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 8.4E-230 T 21-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 VFU_RS13540 ec1fdd1e13a242f9b033138c7e50a8e6 404 Gene3D G3DSA:3.90.1150.10 255 374 6.7E-53 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VFU_RS13540 ec1fdd1e13a242f9b033138c7e50a8e6 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 54.185 T 21-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 VFU_RS13540 ec1fdd1e13a242f9b033138c7e50a8e6 404 Pfam PF00266 Aminotransferase class-V 5 368 6.9E-89 T 21-04-2016 IPR000192 Aminotransferase class V domain VFU_RS13540 ec1fdd1e13a242f9b033138c7e50a8e6 404 Gene3D G3DSA:3.40.640.10 17 254 1.7E-97 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VFU_RS13540 ec1fdd1e13a242f9b033138c7e50a8e6 404 PANTHER PTHR11601:SF45 4 404 2.7E-237 T 21-04-2016 VFU_RS13540 ec1fdd1e13a242f9b033138c7e50a8e6 404 PANTHER PTHR11601 4 404 2.7E-237 T 21-04-2016 VFU_RS13540 ec1fdd1e13a242f9b033138c7e50a8e6 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 21-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VFU_RS13540 ec1fdd1e13a242f9b033138c7e50a8e6 404 SUPERFAMILY SSF53383 5 391 1.34E-115 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VFU_RS13540 ec1fdd1e13a242f9b033138c7e50a8e6 404 PIRSF PIRSF005572 2 384 8.1E-139 T 21-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 VFU_RS04750 6f5fc3b843f38d8b380c9be2e57465e9 221 Pfam PF02976 DNA mismatch repair enzyme MutH 53 151 1.1E-33 T 21-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 VFU_RS04750 6f5fc3b843f38d8b380c9be2e57465e9 221 SMART SM00927 53 151 1.4E-65 T 21-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 VFU_RS04750 6f5fc3b843f38d8b380c9be2e57465e9 221 SUPERFAMILY SSF52980 2 220 5.36E-81 T 21-04-2016 IPR011335 Restriction endonuclease type II-like VFU_RS04750 6f5fc3b843f38d8b380c9be2e57465e9 221 Gene3D G3DSA:3.40.600.10 3 220 1.2E-80 T 21-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 VFU_RS04750 6f5fc3b843f38d8b380c9be2e57465e9 221 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 221 146.389 T 21-04-2016 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 VFU_RS04750 6f5fc3b843f38d8b380c9be2e57465e9 221 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 5 218 1.4E-100 T 21-04-2016 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 VFU_RS02045 6da2751919528c00b5342c492cef6e22 342 Pfam PF02653 Branched-chain amino acid transport system / permease component 58 322 1.4E-41 T 21-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 VFU_RS02045 6da2751919528c00b5342c492cef6e22 342 PANTHER PTHR32196:SF19 1 342 1.4E-165 T 21-04-2016 VFU_RS02045 6da2751919528c00b5342c492cef6e22 342 PANTHER PTHR32196 1 342 1.4E-165 T 21-04-2016 VFU_RS04630 8a2cebee29774b5fd40b942ae36e4bb4 315 PANTHER PTHR13767 1 308 4.0E-128 T 21-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS04630 8a2cebee29774b5fd40b942ae36e4bb4 315 Gene3D G3DSA:2.30.130.10 249 310 1.2E-24 T 21-04-2016 IPR015947 PUA-like domain VFU_RS04630 8a2cebee29774b5fd40b942ae36e4bb4 315 SUPERFAMILY SSF88697 250 309 3.68E-14 T 21-04-2016 IPR015947 PUA-like domain VFU_RS04630 8a2cebee29774b5fd40b942ae36e4bb4 315 SUPERFAMILY SSF55120 9 248 1.27E-80 T 21-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS04630 8a2cebee29774b5fd40b942ae36e4bb4 315 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 308 18.666 T 21-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS04630 8a2cebee29774b5fd40b942ae36e4bb4 315 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 10 218 4.0E-86 T 21-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS04630 8a2cebee29774b5fd40b942ae36e4bb4 315 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 248 2.8E-24 T 21-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal VFU_RS04630 8a2cebee29774b5fd40b942ae36e4bb4 315 PANTHER PTHR13767:SF2 1 308 4.0E-128 T 21-04-2016 VFU_RS04630 8a2cebee29774b5fd40b942ae36e4bb4 315 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 251 308 2.2E-17 T 21-04-2016 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 VFU_RS04630 8a2cebee29774b5fd40b942ae36e4bb4 315 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 179 1.8E-55 T 21-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 VFU_RS19635 8fff17a6e84633b96b510e1acf700cc6 59 Gene3D G3DSA:3.20.19.10 1 59 2.7E-21 T 21-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VFU_RS19635 8fff17a6e84633b96b510e1acf700cc6 59 Pfam PF06434 Aconitate hydratase 2 N-terminus 3 43 5.3E-19 T 21-04-2016 IPR015929 Aconitase B, N-terminal GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 VFU_RS19635 8fff17a6e84633b96b510e1acf700cc6 59 SUPERFAMILY SSF52016 1 58 1.8E-13 T 21-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VFU_RS13000 59ec6c3bf950e4a88ca1ea50bf327af7 269 SUPERFAMILY SSF53850 32 269 1.73E-79 T 21-04-2016 VFU_RS13000 59ec6c3bf950e4a88ca1ea50bf327af7 269 Gene3D G3DSA:3.40.190.10 30 161 5.4E-57 T 21-04-2016 VFU_RS13000 59ec6c3bf950e4a88ca1ea50bf327af7 269 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 15 269 1.8E-125 T 21-04-2016 IPR004872 Lipoprotein NlpA family VFU_RS13000 59ec6c3bf950e4a88ca1ea50bf327af7 269 PANTHER PTHR30429:SF1 3 269 3.8E-142 T 21-04-2016 VFU_RS13000 59ec6c3bf950e4a88ca1ea50bf327af7 269 PIRSF PIRSF002854 1 269 7.8E-100 T 21-04-2016 IPR004872 Lipoprotein NlpA family VFU_RS13000 59ec6c3bf950e4a88ca1ea50bf327af7 269 Pfam PF03180 NLPA lipoprotein 33 269 5.0E-98 T 21-04-2016 IPR004872 Lipoprotein NlpA family VFU_RS13000 59ec6c3bf950e4a88ca1ea50bf327af7 269 PANTHER PTHR30429 3 269 3.8E-142 T 21-04-2016 IPR004872 Lipoprotein NlpA family VFU_RS15230 323e16abbdf2ddd45b2f5be9ad45b248 940 Gene3D G3DSA:1.20.1580.10 250 283 1.7E-54 T 21-04-2016 VFU_RS15230 323e16abbdf2ddd45b2f5be9ad45b248 940 Gene3D G3DSA:1.20.1580.10 91 129 1.7E-54 T 21-04-2016 VFU_RS15230 323e16abbdf2ddd45b2f5be9ad45b248 940 Gene3D G3DSA:1.20.1580.10 406 476 1.7E-54 T 21-04-2016 VFU_RS15230 323e16abbdf2ddd45b2f5be9ad45b248 940 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS15230 323e16abbdf2ddd45b2f5be9ad45b248 940 ProSitePatterns PS00211 ABC transporters family signature. 829 843 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS15230 323e16abbdf2ddd45b2f5be9ad45b248 940 Gene3D G3DSA:1.20.1580.10 693 819 3.3E-54 T 21-04-2016 VFU_RS15230 323e16abbdf2ddd45b2f5be9ad45b248 940 SUPERFAMILY SSF52540 620 912 4.11E-53 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS15230 323e16abbdf2ddd45b2f5be9ad45b248 940 Pfam PF00005 ABC transporter 622 859 8.8E-10 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS15230 323e16abbdf2ddd45b2f5be9ad45b248 940 SUPERFAMILY SSF52540 429 568 8.52E-45 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS15230 323e16abbdf2ddd45b2f5be9ad45b248 940 SUPERFAMILY SSF52540 4 204 8.52E-45 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS15230 323e16abbdf2ddd45b2f5be9ad45b248 940 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 924 0.0 T 21-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 VFU_RS15230 323e16abbdf2ddd45b2f5be9ad45b248 940 Gene3D G3DSA:3.30.1490.20 200 248 9.9E-29 T 21-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VFU_RS15230 323e16abbdf2ddd45b2f5be9ad45b248 940 Gene3D G3DSA:3.30.1490.20 130 153 9.9E-29 T 21-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VFU_RS15230 323e16abbdf2ddd45b2f5be9ad45b248 940 PANTHER PTHR32282 1 940 0.0 T 21-04-2016 VFU_RS15230 323e16abbdf2ddd45b2f5be9ad45b248 940 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 939 22.997 T 21-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 VFU_RS15230 323e16abbdf2ddd45b2f5be9ad45b248 940 Gene3D G3DSA:1.10.8.280 285 405 1.3E-45 T 21-04-2016 VFU_RS15230 323e16abbdf2ddd45b2f5be9ad45b248 940 Gene3D G3DSA:3.40.50.300 820 938 4.6E-61 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS15230 323e16abbdf2ddd45b2f5be9ad45b248 940 Gene3D G3DSA:3.40.50.300 2 51 6.3E-57 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS15230 323e16abbdf2ddd45b2f5be9ad45b248 940 Gene3D G3DSA:3.40.50.300 477 595 6.3E-57 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS15230 323e16abbdf2ddd45b2f5be9ad45b248 940 Gene3D G3DSA:3.40.50.300 605 691 4.6E-61 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS15230 323e16abbdf2ddd45b2f5be9ad45b248 940 PANTHER PTHR32282:SF2 1 940 0.0 T 21-04-2016 VFU_RS17740 a8000d174eca46e711848bed683b4c97 141 PANTHER PTHR22912:SF93 1 141 9.5E-70 T 21-04-2016 VFU_RS17740 a8000d174eca46e711848bed683b4c97 141 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 96 114 9.1E-7 T 21-04-2016 VFU_RS17740 a8000d174eca46e711848bed683b4c97 141 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 57 75 9.1E-7 T 21-04-2016 VFU_RS17740 a8000d174eca46e711848bed683b4c97 141 SUPERFAMILY SSF51905 12 140 2.75E-24 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS17740 a8000d174eca46e711848bed683b4c97 141 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 60 69 2.2E-10 T 21-04-2016 VFU_RS17740 a8000d174eca46e711848bed683b4c97 141 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 96 121 2.2E-10 T 21-04-2016 VFU_RS17740 a8000d174eca46e711848bed683b4c97 141 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 23 140 5.5E-20 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS17740 a8000d174eca46e711848bed683b4c97 141 Gene3D G3DSA:3.50.50.60 3 66 2.8E-10 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS17740 a8000d174eca46e711848bed683b4c97 141 Gene3D G3DSA:3.50.50.60 67 141 2.3E-19 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS17740 a8000d174eca46e711848bed683b4c97 141 PANTHER PTHR22912 1 141 9.5E-70 T 21-04-2016 VFU_RS08760 8f5b7f0515dd7c68e24750c60c9e6944 158 Pfam PF11163 Protein of unknown function (DUF2947) 3 154 3.0E-74 T 21-04-2016 IPR021334 Protein of unknown function DUF2947 VFU_RS01950 e1ead5dc1ba2efd78f254f14353f456e 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 265 4.4E-24 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS01950 e1ead5dc1ba2efd78f254f14353f456e 280 PANTHER PTHR30177 5 272 1.2E-107 T 21-04-2016 VFU_RS01950 e1ead5dc1ba2efd78f254f14353f456e 280 PANTHER PTHR30177:SF2 5 272 1.2E-107 T 21-04-2016 VFU_RS01950 e1ead5dc1ba2efd78f254f14353f456e 280 TIGRFAM TIGR03416 ABC_choXWV_perm: choline ABC transporter, permease protein 4 270 4.0E-129 T 21-04-2016 IPR017784 ABC transporter, choline, permease protein VFU_RS01950 e1ead5dc1ba2efd78f254f14353f456e 280 Gene3D G3DSA:1.10.3720.10 85 266 4.1E-34 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS01950 e1ead5dc1ba2efd78f254f14353f456e 280 SUPERFAMILY SSF161098 86 270 4.84E-38 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS08415 e7ed6021716e8e6857fb97469cd3d24a 376 Gene3D G3DSA:2.40.370.10 255 376 2.2E-35 T 21-04-2016 IPR023374 AttH-like domain VFU_RS08415 e7ed6021716e8e6857fb97469cd3d24a 376 PANTHER PTHR38591 2 376 1.7E-91 T 21-04-2016 VFU_RS08415 e7ed6021716e8e6857fb97469cd3d24a 376 Pfam PF07143 CrtC N-terminal lipocalin domain 79 250 2.4E-45 T 21-04-2016 IPR010791 AttH domain VFU_RS08415 e7ed6021716e8e6857fb97469cd3d24a 376 Gene3D G3DSA:2.40.370.10 67 252 4.0E-57 T 21-04-2016 IPR023374 AttH-like domain VFU_RS08415 e7ed6021716e8e6857fb97469cd3d24a 376 SUPERFAMILY SSF159245 56 376 9.55E-97 T 21-04-2016 VFU_RS08415 e7ed6021716e8e6857fb97469cd3d24a 376 Pfam PF17186 Lipocalin-like domain 253 376 5.6E-33 T 21-04-2016 IPR033451 AttH, lipocalin-like domain VFU_RS07805 ba292a4c1a5e41587c8f99b166d01ff0 531 PANTHER PTHR33451 1 496 3.3E-215 T 21-04-2016 VFU_RS07805 ba292a4c1a5e41587c8f99b166d01ff0 531 Pfam PF03553 Na+/H+ antiporter family 165 495 1.7E-100 T 21-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VFU_RS07805 ba292a4c1a5e41587c8f99b166d01ff0 531 PANTHER PTHR33451:SF7 1 496 3.3E-215 T 21-04-2016 VFU_RS21970 f1b2d8d87a833158537d42287cb1df90 111 Gene3D G3DSA:1.10.8.60 16 90 4.6E-23 T 21-04-2016 VFU_RS21970 f1b2d8d87a833158537d42287cb1df90 111 PANTHER PTHR32071:SF21 1 84 4.0E-35 T 21-04-2016 IPR029995 Transcriptional regulatory protein FlbD GO:0003700|GO:0006355 VFU_RS21970 f1b2d8d87a833158537d42287cb1df90 111 PANTHER PTHR32071 1 84 4.0E-35 T 21-04-2016 VFU_RS21970 f1b2d8d87a833158537d42287cb1df90 111 SUPERFAMILY SSF52540 1 83 1.23E-16 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS21970 f1b2d8d87a833158537d42287cb1df90 111 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 54 63 - T 21-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VFU_RS04175 d3291b584cfc0d10533597e72a9b897a 202 Pfam PF08239 Bacterial SH3 domain 31 81 1.4E-9 T 21-04-2016 IPR003646 SH3-like domain, bacterial-type VFU_RS04175 d3291b584cfc0d10533597e72a9b897a 202 SMART SM00287 19 85 1.5E-10 T 21-04-2016 IPR003646 SH3-like domain, bacterial-type VFU_RS04175 d3291b584cfc0d10533597e72a9b897a 202 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 23 201 4.0E-50 T 21-04-2016 IPR016476 SH3 domain protein VFU_RS04175 d3291b584cfc0d10533597e72a9b897a 202 PIRSF PIRSF006158 1 202 3.0E-68 T 21-04-2016 IPR016476 SH3 domain protein VFU_RS11645 da563c7a547c75919a57776d536025cb 179 PANTHER PTHR35602 1 177 1.7E-126 T 21-04-2016 VFU_RS11645 da563c7a547c75919a57776d536025cb 179 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 49.178 T 21-04-2016 IPR022987 Uncharacterised protein family UPF0227 VFU_RS11645 da563c7a547c75919a57776d536025cb 179 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 1.7E-68 T 21-04-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA VFU_RS11645 da563c7a547c75919a57776d536025cb 179 PANTHER PTHR35602:SF2 1 177 1.7E-126 T 21-04-2016 VFU_RS11645 da563c7a547c75919a57776d536025cb 179 SUPERFAMILY SSF53474 2 176 1.69E-7 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold VFU_RS09895 982e76fc339ec12493005c09078d928d 118 PANTHER PTHR33993 1 118 1.3E-58 T 21-04-2016 VFU_RS09895 982e76fc339ec12493005c09078d928d 118 Gene3D G3DSA:3.10.180.10 7 116 1.2E-24 T 21-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VFU_RS09895 982e76fc339ec12493005c09078d928d 118 PANTHER PTHR33993:SF1 1 118 1.3E-58 T 21-04-2016 VFU_RS09895 982e76fc339ec12493005c09078d928d 118 SUPERFAMILY SSF54593 6 117 4.81E-23 T 21-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VFU_RS09895 982e76fc339ec12493005c09078d928d 118 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 112 4.0E-8 T 21-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VFU_RS11900 e3cf593b4d8c31c80b8217c26f0f66f7 206 PANTHER PTHR30086 1 206 2.3E-131 T 21-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VFU_RS11900 e3cf593b4d8c31c80b8217c26f0f66f7 206 Pfam PF01810 LysE type translocator 16 204 4.6E-27 T 21-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VFU_RS11900 e3cf593b4d8c31c80b8217c26f0f66f7 206 PIRSF PIRSF006324 1 206 5.2E-44 T 21-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VFU_RS11900 e3cf593b4d8c31c80b8217c26f0f66f7 206 PANTHER PTHR30086:SF5 1 206 2.3E-131 T 21-04-2016 VFU_RS01755 1c1dccbff1b0a32712367dc0c2ed8307 257 SUPERFAMILY SSF52540 2 253 3.63E-67 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS01755 1c1dccbff1b0a32712367dc0c2ed8307 257 PANTHER PTHR13696:SF52 2 254 1.4E-88 T 21-04-2016 VFU_RS01755 1c1dccbff1b0a32712367dc0c2ed8307 257 PANTHER PTHR13696 2 254 1.4E-88 T 21-04-2016 VFU_RS01755 1c1dccbff1b0a32712367dc0c2ed8307 257 Pfam PF13614 AAA domain 2 178 3.3E-63 T 21-04-2016 IPR025669 AAA domain VFU_RS01755 1c1dccbff1b0a32712367dc0c2ed8307 257 Gene3D G3DSA:3.40.50.300 3 254 2.3E-71 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS07980 462accfef1a3ef93678aa5b1e7f82add 269 Gene3D G3DSA:3.40.50.620 79 210 1.6E-14 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VFU_RS07980 462accfef1a3ef93678aa5b1e7f82add 269 PANTHER PTHR30336:SF1 1 257 5.1E-77 T 21-04-2016 VFU_RS07980 462accfef1a3ef93678aa5b1e7f82add 269 Pfam PF02698 DUF218 domain 80 239 1.9E-25 T 21-04-2016 IPR003848 Domain of unknown function DUF218 VFU_RS07980 462accfef1a3ef93678aa5b1e7f82add 269 PANTHER PTHR30336 1 257 5.1E-77 T 21-04-2016 VFU_RS06535 a3244fe8452efafe16aa0aec8ad603ae 209 SUPERFAMILY SSF52540 1 208 2.15E-54 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS06535 a3244fe8452efafe16aa0aec8ad603ae 209 PANTHER PTHR10344 1 209 2.2E-68 T 21-04-2016 VFU_RS06535 a3244fe8452efafe16aa0aec8ad603ae 209 ProSitePatterns PS01331 Thymidylate kinase signature. 95 107 - T 21-04-2016 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 VFU_RS06535 a3244fe8452efafe16aa0aec8ad603ae 209 Pfam PF02223 Thymidylate kinase 8 198 1.8E-58 T 21-04-2016 VFU_RS06535 a3244fe8452efafe16aa0aec8ad603ae 209 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 198 4.8E-63 T 21-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 VFU_RS06535 a3244fe8452efafe16aa0aec8ad603ae 209 Gene3D G3DSA:3.40.50.300 3 207 4.4E-67 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS06535 a3244fe8452efafe16aa0aec8ad603ae 209 Hamap MF_00165 Thymidylate kinase [tmk]. 4 206 27.41 T 21-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 VFU_RS14190 2c2a7c875f8e6892afdbbfe9bd504731 132 PRINTS PR00502 NUDIX hydrolase family signature 48 63 2.8E-9 T 21-04-2016 IPR020476 NUDIX hydrolase VFU_RS14190 2c2a7c875f8e6892afdbbfe9bd504731 132 PRINTS PR00502 NUDIX hydrolase family signature 34 48 2.8E-9 T 21-04-2016 IPR020476 NUDIX hydrolase VFU_RS14190 2c2a7c875f8e6892afdbbfe9bd504731 132 SUPERFAMILY SSF55811 1 128 2.03E-33 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VFU_RS14190 2c2a7c875f8e6892afdbbfe9bd504731 132 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 21-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VFU_RS14190 2c2a7c875f8e6892afdbbfe9bd504731 132 PANTHER PTHR22769:SF36 1 130 4.6E-38 T 21-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 VFU_RS14190 2c2a7c875f8e6892afdbbfe9bd504731 132 PANTHER PTHR22769 1 130 4.6E-38 T 21-04-2016 VFU_RS14190 2c2a7c875f8e6892afdbbfe9bd504731 132 Pfam PF00293 NUDIX domain 5 126 1.5E-19 T 21-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 VFU_RS14190 2c2a7c875f8e6892afdbbfe9bd504731 132 Gene3D G3DSA:3.90.79.10 1 128 1.0E-30 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VFU_RS14190 2c2a7c875f8e6892afdbbfe9bd504731 132 TIGRFAM TIGR00586 mutt: mutator mutT protein 1 127 4.6E-41 T 21-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 VFU_RS02030 e2f1d5845c4c61b6122472ab23ecaee5 107 Pfam PF10625 Universal stress protein B (UspB) 1 106 2.7E-50 T 21-04-2016 IPR019598 Universal stress protein B VFU_RS02030 e2f1d5845c4c61b6122472ab23ecaee5 107 Hamap MF_01088 Universal stress protein B [uspB]. 1 107 36.074 T 21-04-2016 IPR019598 Universal stress protein B VFU_RS14110 06f11d5972b207de5d987dd103a22ad0 470 Gene3D G3DSA:3.50.50.60 237 398 1.4E-50 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS14110 06f11d5972b207de5d987dd103a22ad0 470 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 457 6.0E-24 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS14110 06f11d5972b207de5d987dd103a22ad0 470 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 1.2E-38 T 21-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II VFU_RS14110 06f11d5972b207de5d987dd103a22ad0 470 SUPERFAMILY SSF46548 6 157 1.26E-41 T 21-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 VFU_RS14110 06f11d5972b207de5d987dd103a22ad0 470 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 470 2.1E-248 T 21-04-2016 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 VFU_RS14110 06f11d5972b207de5d987dd103a22ad0 470 PANTHER PTHR11938:SF93 23 470 6.4E-296 T 21-04-2016 VFU_RS14110 06f11d5972b207de5d987dd103a22ad0 470 PANTHER PTHR11938 23 470 6.4E-296 T 21-04-2016 VFU_RS14110 06f11d5972b207de5d987dd103a22ad0 470 Gene3D G3DSA:1.10.1060.10 5 149 2.9E-47 T 21-04-2016 VFU_RS14110 06f11d5972b207de5d987dd103a22ad0 470 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 5.0E-37 T 21-04-2016 VFU_RS14110 06f11d5972b207de5d987dd103a22ad0 470 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 5.0E-37 T 21-04-2016 VFU_RS14110 06f11d5972b207de5d987dd103a22ad0 470 PRINTS PR00419 Adrenodoxin reductase family signature 322 335 5.0E-37 T 21-04-2016 VFU_RS14110 06f11d5972b207de5d987dd103a22ad0 470 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 5.0E-37 T 21-04-2016 VFU_RS14110 06f11d5972b207de5d987dd103a22ad0 470 PRINTS PR00419 Adrenodoxin reductase family signature 288 302 5.0E-37 T 21-04-2016 VFU_RS14110 06f11d5972b207de5d987dd103a22ad0 470 Gene3D G3DSA:3.40.50.720 399 469 1.3E-33 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS14110 06f11d5972b207de5d987dd103a22ad0 470 Gene3D G3DSA:3.40.50.720 150 236 1.3E-33 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS14110 06f11d5972b207de5d987dd103a22ad0 470 SUPERFAMILY SSF51971 145 399 5.89E-68 T 21-04-2016 VFU_RS06430 ee7643cf1fa14b78fee64633bb3df3a6 479 Pfam PF03553 Na+/H+ antiporter family 161 453 3.5E-66 T 21-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VFU_RS06430 ee7643cf1fa14b78fee64633bb3df3a6 479 PANTHER PTHR33451 7 476 0.0 T 21-04-2016 VFU_RS06430 ee7643cf1fa14b78fee64633bb3df3a6 479 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 7 457 2.4E-160 T 21-04-2016 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 VFU_RS06430 ee7643cf1fa14b78fee64633bb3df3a6 479 PANTHER PTHR33451:SF1 7 476 0.0 T 21-04-2016 VFU_RS20525 64077947d42dd7a1623432d5bef84b36 249 PANTHER PTHR30372 1 248 2.3E-88 T 21-04-2016 VFU_RS20525 64077947d42dd7a1623432d5bef84b36 249 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 1 245 6.4E-100 T 21-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 VFU_RS20525 64077947d42dd7a1623432d5bef84b36 249 Gene3D G3DSA:3.40.50.2000 71 198 3.5E-4 T 21-04-2016 VFU_RS20525 64077947d42dd7a1623432d5bef84b36 249 PANTHER PTHR30372:SF0 1 248 2.3E-88 T 21-04-2016 VFU_RS20525 64077947d42dd7a1623432d5bef84b36 249 SUPERFAMILY SSF53756 18 205 7.53E-17 T 21-04-2016 VFU_RS20525 64077947d42dd7a1623432d5bef84b36 249 Pfam PF02684 Lipid-A-disaccharide synthetase 1 244 4.2E-94 T 21-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 VFU_RS03795 0980f5c84cb132dc21afc4ce97d81c23 411 PANTHER PTHR30349:SF20 139 401 1.3E-25 T 21-04-2016 VFU_RS03795 0980f5c84cb132dc21afc4ce97d81c23 411 Pfam PF00589 Phage integrase family 221 386 3.5E-19 T 21-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VFU_RS03795 0980f5c84cb132dc21afc4ce97d81c23 411 PANTHER PTHR30349 139 401 1.3E-25 T 21-04-2016 VFU_RS03795 0980f5c84cb132dc21afc4ce97d81c23 411 Gene3D G3DSA:1.10.443.10 221 393 4.3E-30 T 21-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VFU_RS03795 0980f5c84cb132dc21afc4ce97d81c23 411 SUPERFAMILY SSF56349 126 393 8.01E-42 T 21-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VFU_RS03795 0980f5c84cb132dc21afc4ce97d81c23 411 Pfam PF13356 Domain of unknown function (DUF4102) 8 105 5.1E-11 T 21-04-2016 IPR025166 Domain of unknown function DUF4102 VFU_RS02385 8647252254399811f58e17c7aa6ccbcd 135 Pfam PF03748 Flagellar basal body-associated protein FliL 33 135 2.5E-19 T 21-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 VFU_RS02385 8647252254399811f58e17c7aa6ccbcd 135 PANTHER PTHR35091 23 135 3.5E-36 T 21-04-2016 VFU_RS08755 cd0260eb06e0c27f1426af1b4cfc4ac0 196 SUPERFAMILY SSF109604 6 185 1.19E-43 T 21-04-2016 VFU_RS08755 cd0260eb06e0c27f1426af1b4cfc4ac0 196 PANTHER PTHR11845 3 139 6.1E-29 T 21-04-2016 VFU_RS08755 cd0260eb06e0c27f1426af1b4cfc4ac0 196 Gene3D G3DSA:1.10.3210.10 3 187 3.2E-39 T 21-04-2016 IPR006674 HD domain VFU_RS08755 cd0260eb06e0c27f1426af1b4cfc4ac0 196 Pfam PF13023 HD domain 16 178 7.6E-53 T 21-04-2016 IPR006674 HD domain VFU_RS15330 475a41c74c2b38d1f2496415c3d7943e 153 PANTHER PTHR39452:SF1 1 153 2.1E-78 T 21-04-2016 VFU_RS15330 475a41c74c2b38d1f2496415c3d7943e 153 Pfam PF13690 Chemotaxis phosphatase CheX 42 139 4.2E-22 T 21-04-2016 IPR028051 Chemotaxis phosphatase CheX-like domain KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- VFU_RS15330 475a41c74c2b38d1f2496415c3d7943e 153 SUPERFAMILY SSF103039 1 153 4.84E-38 T 21-04-2016 IPR028976 CheC-like domain VFU_RS15330 475a41c74c2b38d1f2496415c3d7943e 153 PANTHER PTHR39452 1 153 2.1E-78 T 21-04-2016 VFU_RS15330 475a41c74c2b38d1f2496415c3d7943e 153 Gene3D G3DSA:3.40.1550.10 1 153 3.0E-44 T 21-04-2016 IPR028976 CheC-like domain VFU_RS03660 b73025a075713c629874a4a97ac3e729 164 PANTHER PTHR33371 1 160 1.2E-45 T 21-04-2016 VFU_RS03660 b73025a075713c629874a4a97ac3e729 164 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 4 152 3.6E-55 T 21-04-2016 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 VFU_RS03660 b73025a075713c629874a4a97ac3e729 164 Pfam PF02470 MlaD protein 39 118 5.2E-20 T 21-04-2016 IPR003399 Mce/MlaD VFU_RS01820 48b26e0ccae1be690ed25875257fe177 257 Gene3D G3DSA:3.40.190.10 144 206 6.3E-7 T 21-04-2016 VFU_RS01820 48b26e0ccae1be690ed25875257fe177 257 SMART SM00062 32 256 1.2E-36 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VFU_RS01820 48b26e0ccae1be690ed25875257fe177 257 PANTHER PTHR18966:SF243 20 252 9.9E-26 T 21-04-2016 VFU_RS01820 48b26e0ccae1be690ed25875257fe177 257 Gene3D G3DSA:3.40.190.10 13 143 1.1E-29 T 21-04-2016 VFU_RS01820 48b26e0ccae1be690ed25875257fe177 257 PANTHER PTHR18966 20 252 9.9E-26 T 21-04-2016 VFU_RS01820 48b26e0ccae1be690ed25875257fe177 257 SUPERFAMILY SSF53850 1 255 2.98E-48 T 21-04-2016 VFU_RS01820 48b26e0ccae1be690ed25875257fe177 257 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 33 253 2.5E-36 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VFU_RS01820 48b26e0ccae1be690ed25875257fe177 257 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 56 69 - T 21-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 VFU_RS10205 2ff16888752565d3704632a0e9a3bd33 431 PANTHER PTHR30193 106 429 1.9E-190 T 21-04-2016 VFU_RS10205 2ff16888752565d3704632a0e9a3bd33 431 Gene3D G3DSA:1.10.3720.10 193 425 2.8E-62 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS10205 2ff16888752565d3704632a0e9a3bd33 431 Gene3D G3DSA:1.20.58.370 128 164 5.8E-7 T 21-04-2016 VFU_RS10205 2ff16888752565d3704632a0e9a3bd33 431 SUPERFAMILY SSF160964 127 184 1.96E-8 T 21-04-2016 VFU_RS10205 2ff16888752565d3704632a0e9a3bd33 431 PANTHER PTHR30193:SF17 106 429 1.9E-190 T 21-04-2016 VFU_RS10205 2ff16888752565d3704632a0e9a3bd33 431 SUPERFAMILY SSF161098 179 415 7.98E-55 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS10205 2ff16888752565d3704632a0e9a3bd33 431 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 216 413 5.6E-23 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS06570 c3a00e8ebace5878b43e81f4c6144e80 486 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 27 41 - T 21-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VFU_RS06570 c3a00e8ebace5878b43e81f4c6144e80 486 PANTHER PTHR11616:SF11 1 482 5.6E-184 T 21-04-2016 VFU_RS06570 c3a00e8ebace5878b43e81f4c6144e80 486 PANTHER PTHR11616 1 482 5.6E-184 T 21-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VFU_RS06570 c3a00e8ebace5878b43e81f4c6144e80 486 SUPERFAMILY SSF161070 3 472 9.81E-149 T 21-04-2016 VFU_RS06570 c3a00e8ebace5878b43e81f4c6144e80 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 40 59 7.0E-36 T 21-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VFU_RS06570 c3a00e8ebace5878b43e81f4c6144e80 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 11 32 7.0E-36 T 21-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VFU_RS06570 c3a00e8ebace5878b43e81f4c6144e80 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 428 448 7.0E-36 T 21-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VFU_RS06570 c3a00e8ebace5878b43e81f4c6144e80 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 84 110 7.0E-36 T 21-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VFU_RS06570 c3a00e8ebace5878b43e81f4c6144e80 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 311 330 7.0E-36 T 21-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VFU_RS06570 c3a00e8ebace5878b43e81f4c6144e80 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 257 277 7.0E-36 T 21-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VFU_RS06570 c3a00e8ebace5878b43e81f4c6144e80 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 388 408 7.0E-36 T 21-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VFU_RS06570 c3a00e8ebace5878b43e81f4c6144e80 486 Pfam PF00209 Sodium:neurotransmitter symporter family 123 472 1.1E-77 T 21-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VFU_RS06570 c3a00e8ebace5878b43e81f4c6144e80 486 Pfam PF00209 Sodium:neurotransmitter symporter family 3 120 1.9E-39 T 21-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VFU_RS09715 f79dbb0ddd3059eaa9ea5d74d395baea 210 Pfam PF10816 Domain of unknown function (DUF2760) 87 209 9.3E-54 T 21-04-2016 IPR021212 Domain of unknown function DUF2760 VFU_RS10930 957953b99c7db68d531155bd05778a5d 278 SUPERFAMILY SSF64518 1 277 1.14E-71 T 21-04-2016 VFU_RS10930 957953b99c7db68d531155bd05778a5d 278 PANTHER PTHR30244:SF1 2 277 1.0E-83 T 21-04-2016 VFU_RS10930 957953b99c7db68d531155bd05778a5d 278 PANTHER PTHR30244 2 277 1.0E-83 T 21-04-2016 VFU_RS10930 957953b99c7db68d531155bd05778a5d 278 PRINTS PR00207 Flagellin signature 76 95 2.7E-19 T 21-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VFU_RS10930 957953b99c7db68d531155bd05778a5d 278 PRINTS PR00207 Flagellin signature 37 54 2.7E-19 T 21-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VFU_RS10930 957953b99c7db68d531155bd05778a5d 278 PRINTS PR00207 Flagellin signature 111 134 2.7E-19 T 21-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VFU_RS10930 957953b99c7db68d531155bd05778a5d 278 Pfam PF00700 Bacterial flagellin C-terminal helical region 193 277 1.2E-19 T 21-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VFU_RS10930 957953b99c7db68d531155bd05778a5d 278 Gene3D G3DSA:1.20.1330.10 55 233 1.1E-44 T 21-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VFU_RS10930 957953b99c7db68d531155bd05778a5d 278 Pfam PF00669 Bacterial flagellin N-terminal helical region 6 141 1.6E-38 T 21-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VFU_RS07415 753bc4378b327548928a0ebb5d0c219d 423 SMART SM00388 224 293 1.0E-11 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS07415 753bc4378b327548928a0ebb5d0c219d 423 PANTHER PTHR24423 165 363 4.2E-22 T 21-04-2016 VFU_RS07415 753bc4378b327548928a0ebb5d0c219d 423 PANTHER PTHR24423 1 10 4.2E-22 T 21-04-2016 VFU_RS07415 753bc4378b327548928a0ebb5d0c219d 423 SUPERFAMILY SSF55874 294 406 7.23E-11 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS07415 753bc4378b327548928a0ebb5d0c219d 423 SUPERFAMILY SSF47384 207 290 3.73E-13 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS07415 753bc4378b327548928a0ebb5d0c219d 423 Pfam PF00512 His Kinase A (phospho-acceptor) domain 226 289 9.6E-14 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS07415 753bc4378b327548928a0ebb5d0c219d 423 Gene3D G3DSA:3.30.565.10 295 365 1.5E-7 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS07415 753bc4378b327548928a0ebb5d0c219d 423 Gene3D G3DSA:1.10.287.130 218 289 3.4E-12 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS10595 b6acfd620b557336880fe509fddf1c66 362 SUPERFAMILY SSF55909 3 360 2.14E-137 T 21-04-2016 VFU_RS10595 b6acfd620b557336880fe509fddf1c66 362 PANTHER PTHR31377:SF2 1 360 9.8E-162 T 21-04-2016 VFU_RS10595 b6acfd620b557336880fe509fddf1c66 362 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 14 359 2.4E-119 T 21-04-2016 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 VFU_RS10595 b6acfd620b557336880fe509fddf1c66 362 Hamap MF_01841 Agmatine deiminase [aguA]. 5 360 59.074 T 21-04-2016 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 VFU_RS10595 b6acfd620b557336880fe509fddf1c66 362 TIGRFAM TIGR03380 agmatine_aguA: agmatine deiminase 6 360 4.9E-167 T 21-04-2016 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 VFU_RS10595 b6acfd620b557336880fe509fddf1c66 362 PANTHER PTHR31377 1 360 9.8E-162 T 21-04-2016 VFU_RS10595 b6acfd620b557336880fe509fddf1c66 362 Gene3D G3DSA:3.75.10.10 4 360 2.4E-143 T 21-04-2016 VFU_RS05505 2c134de857bbe9a55fec87d8fb343f8e 218 SMART SM00858 96 158 3.1E-7 T 21-04-2016 IPR013974 SAF domain VFU_RS05505 2c134de857bbe9a55fec87d8fb343f8e 218 PANTHER PTHR36307 12 218 1.9E-41 T 21-04-2016 VFU_RS05505 2c134de857bbe9a55fec87d8fb343f8e 218 Pfam PF13144 Chaperone for flagella basal body P-ring formation 19 216 1.1E-51 T 21-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal VFU_RS05505 2c134de857bbe9a55fec87d8fb343f8e 218 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 84 217 4.3E-38 T 21-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal VFU_RS08955 a531cfb4d20e50785ba4096b325c45d5 304 SUPERFAMILY SSF75005 48 272 2.36E-9 T 21-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain VFU_RS08955 a531cfb4d20e50785ba4096b325c45d5 304 Gene3D G3DSA:2.115.10.20 110 210 3.5E-4 T 21-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain VFU_RS14710 b198233fa6efabf8523aa382f45e63fb 168 SUPERFAMILY SSF54631 22 144 5.54E-18 T 21-04-2016 VFU_RS14710 b198233fa6efabf8523aa382f45e63fb 168 Gene3D G3DSA:3.10.580.10 22 141 8.6E-11 T 21-04-2016 VFU_RS13895 aad22936a752e8fd65f6f9028c4faaaf 489 PRINTS PR00811 Bacterial general secretion pathway protein D signature 254 278 9.2E-13 T 21-04-2016 IPR001775 GspD/PilQ family VFU_RS13895 aad22936a752e8fd65f6f9028c4faaaf 489 PRINTS PR00811 Bacterial general secretion pathway protein D signature 388 406 9.2E-13 T 21-04-2016 IPR001775 GspD/PilQ family VFU_RS13895 aad22936a752e8fd65f6f9028c4faaaf 489 PRINTS PR00811 Bacterial general secretion pathway protein D signature 178 188 9.2E-13 T 21-04-2016 IPR001775 GspD/PilQ family VFU_RS13895 aad22936a752e8fd65f6f9028c4faaaf 489 PRINTS PR00811 Bacterial general secretion pathway protein D signature 411 425 9.2E-13 T 21-04-2016 IPR001775 GspD/PilQ family VFU_RS13895 aad22936a752e8fd65f6f9028c4faaaf 489 PANTHER PTHR30332:SF1 154 451 4.3E-63 T 21-04-2016 VFU_RS13895 aad22936a752e8fd65f6f9028c4faaaf 489 PANTHER PTHR30332 154 451 4.3E-63 T 21-04-2016 VFU_RS13895 aad22936a752e8fd65f6f9028c4faaaf 489 Pfam PF13629 Pilus formation protein N terminal region 26 95 1.2E-18 T 21-04-2016 IPR032789 Pilus formation protein, N-terminal VFU_RS13895 aad22936a752e8fd65f6f9028c4faaaf 489 Pfam PF00263 Bacterial type II and III secretion system protein 260 422 1.8E-39 T 21-04-2016 IPR004846 Type II/III secretion system GO:0009306 VFU_RS13550 fbe3092908821868b2f6f2eb8a13a0d3 243 PANTHER PTHR12029 7 180 3.2E-44 T 21-04-2016 VFU_RS13550 fbe3092908821868b2f6f2eb8a13a0d3 243 Pfam PF00588 SpoU rRNA Methylase family 5 154 3.9E-35 T 21-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VFU_RS13550 fbe3092908821868b2f6f2eb8a13a0d3 243 PIRSF PIRSF004808 1 243 1.2E-74 T 21-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 VFU_RS13550 fbe3092908821868b2f6f2eb8a13a0d3 243 SUPERFAMILY SSF75217 4 173 3.66E-39 T 21-04-2016 IPR029028 Alpha/beta knot methyltransferases VFU_RS13550 fbe3092908821868b2f6f2eb8a13a0d3 243 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 238 5.6E-86 T 21-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 VFU_RS13550 fbe3092908821868b2f6f2eb8a13a0d3 243 Gene3D G3DSA:3.40.1280.10 3 157 1.3E-33 T 21-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VFU_RS12490 b20e27f3f0cb0547266935a831c80a61 159 SUPERFAMILY SSF55040 11 155 1.7E-61 T 21-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 VFU_RS12490 b20e27f3f0cb0547266935a831c80a61 159 Gene3D G3DSA:3.30.70.640 3 157 2.7E-70 T 21-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 VFU_RS12490 b20e27f3f0cb0547266935a831c80a61 159 PANTHER PTHR22960 1 158 7.3E-110 T 21-04-2016 VFU_RS12490 b20e27f3f0cb0547266935a831c80a61 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 2 158 35.955 T 21-04-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type UniPathway: UPA00344 VFU_RS12490 b20e27f3f0cb0547266935a831c80a61 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 1.2E-71 T 21-04-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 VFU_RS12490 b20e27f3f0cb0547266935a831c80a61 159 Pfam PF01967 MoaC family 15 150 3.1E-56 T 21-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 VFU_RS09050 763577fb528de55f0f39b61c1105bce9 255 TIGRFAM TIGR03950 sidero_Fe_reduc: siderophore ferric iron reductase, AHA_1954 family 15 239 5.6E-93 T 21-04-2016 IPR023998 Siderophore ferric iron reductase, AHA1954 family VFU_RS17845 140634173b55eef11478e9d354755ab7 302 Gene3D G3DSA:2.40.30.10 2 105 8.3E-28 T 21-04-2016 VFU_RS17845 140634173b55eef11478e9d354755ab7 302 PANTHER PTHR23115:SF14 1 300 1.7E-136 T 21-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 VFU_RS17845 140634173b55eef11478e9d354755ab7 302 SUPERFAMILY SSF54980 104 189 1.62E-16 T 21-04-2016 IPR009022 Elongation factor G, III-V domain VFU_RS17845 140634173b55eef11478e9d354755ab7 302 Gene3D G3DSA:3.30.70.240 202 280 3.4E-32 T 21-04-2016 IPR000640 Translation elongation factor EFG, V domain VFU_RS17845 140634173b55eef11478e9d354755ab7 302 PANTHER PTHR23115 1 300 1.7E-136 T 21-04-2016 VFU_RS17845 140634173b55eef11478e9d354755ab7 302 SUPERFAMILY SSF50447 2 101 4.99E-27 T 21-04-2016 IPR009000 Translation protein, beta-barrel domain VFU_RS17845 140634173b55eef11478e9d354755ab7 302 Gene3D G3DSA:3.30.70.870 106 201 8.2E-40 T 21-04-2016 VFU_RS17845 140634173b55eef11478e9d354755ab7 302 SUPERFAMILY SSF54980 200 291 2.49E-24 T 21-04-2016 IPR009022 Elongation factor G, III-V domain VFU_RS17845 140634173b55eef11478e9d354755ab7 302 Pfam PF00679 Elongation factor G C-terminus 197 278 5.8E-22 T 21-04-2016 IPR000640 Translation elongation factor EFG, V domain VFU_RS17845 140634173b55eef11478e9d354755ab7 302 Pfam PF03144 Elongation factor Tu domain 2 21 91 3.6E-10 T 21-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 VFU_RS08040 5a0eb10a6c213c59e55c5405ca5cef25 192 Gene3D G3DSA:3.30.60.20 142 189 2.1E-19 T 21-04-2016 VFU_RS08040 5a0eb10a6c213c59e55c5405ca5cef25 192 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 34.961 T 21-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 VFU_RS08040 5a0eb10a6c213c59e55c5405ca5cef25 192 PIRSF PIRSF035805 1 191 8.3E-58 T 21-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 VFU_RS08040 5a0eb10a6c213c59e55c5405ca5cef25 192 SUPERFAMILY SSF52540 2 141 5.72E-43 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS08040 5a0eb10a6c213c59e55c5405ca5cef25 192 SUPERFAMILY SSF57716 142 189 1.19E-16 T 21-04-2016 VFU_RS08040 5a0eb10a6c213c59e55c5405ca5cef25 192 PANTHER PTHR11441 1 190 1.2E-80 T 21-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 VFU_RS08040 5a0eb10a6c213c59e55c5405ca5cef25 192 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 21-04-2016 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 VFU_RS08040 5a0eb10a6c213c59e55c5405ca5cef25 192 Pfam PF00265 Thymidine kinase 2 186 4.1E-61 T 21-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 VFU_RS08040 5a0eb10a6c213c59e55c5405ca5cef25 192 Gene3D G3DSA:3.40.50.300 14 114 8.9E-4 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS20600 b11f9ef9ac3e00be28b8772a499dd30f 141 Pfam PF09317 Domain of unknown function (DUF1974) 1 141 3.0E-66 T 21-04-2016 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.-|UniPathway: UPA00659 VFU_RS09855 4d0a637f7d841f18cfed3b75df9c5746 179 PIRSF PIRSF000192 7 178 7.8E-48 T 21-04-2016 IPR016008 Amine dehydrogenase light chain GO:0009308|GO:0030058|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967|UniPathway: UPA00895 VFU_RS09855 4d0a637f7d841f18cfed3b75df9c5746 179 Pfam PF02975 Methylamine dehydrogenase, L chain 66 175 9.6E-49 T 21-04-2016 IPR013504 Methylamine/Aralkylamine dehydrogenase light chain, C-terminal domain GO:0009308|GO:0016638|GO:0042597|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967|UniPathway: UPA00895 VFU_RS09855 4d0a637f7d841f18cfed3b75df9c5746 179 SUPERFAMILY SSF57561 62 177 1.96E-48 T 21-04-2016 IPR013504 Methylamine/Aralkylamine dehydrogenase light chain, C-terminal domain GO:0009308|GO:0016638|GO:0042597|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967|UniPathway: UPA00895 VFU_RS09855 4d0a637f7d841f18cfed3b75df9c5746 179 Gene3D G3DSA:2.60.30.10 43 178 2.6E-56 T 21-04-2016 IPR013504 Methylamine/Aralkylamine dehydrogenase light chain, C-terminal domain GO:0009308|GO:0016638|GO:0042597|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967|UniPathway: UPA00895 VFU_RS12405 9d782dc9b791a10984c79c9b5b1e6c68 420 Gene3D G3DSA:2.40.160.60 25 420 2.9E-119 T 21-04-2016 VFU_RS12405 9d782dc9b791a10984c79c9b5b1e6c68 420 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 17 420 6.8E-116 T 21-04-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VFU_RS12405 9d782dc9b791a10984c79c9b5b1e6c68 420 PANTHER PTHR35093 3 420 3.7E-215 T 21-04-2016 VFU_RS12405 9d782dc9b791a10984c79c9b5b1e6c68 420 SUPERFAMILY SSF56935 26 420 2.43E-83 T 21-04-2016 VFU_RS12405 9d782dc9b791a10984c79c9b5b1e6c68 420 PANTHER PTHR35093:SF1 3 420 3.7E-215 T 21-04-2016 VFU_RS07445 a937e2e297bfe9f0961517ed5f469bbd 309 PANTHER PTHR10584:SF161 1 307 3.8E-114 T 21-04-2016 VFU_RS07445 a937e2e297bfe9f0961517ed5f469bbd 309 PRINTS PR00990 Ribokinase signature 175 190 1.0E-7 T 21-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 VFU_RS07445 a937e2e297bfe9f0961517ed5f469bbd 309 PRINTS PR00990 Ribokinase signature 214 225 1.0E-7 T 21-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 VFU_RS07445 a937e2e297bfe9f0961517ed5f469bbd 309 PRINTS PR00990 Ribokinase signature 22 41 1.0E-7 T 21-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 VFU_RS07445 a937e2e297bfe9f0961517ed5f469bbd 309 SUPERFAMILY SSF53613 1 305 8.73E-84 T 21-04-2016 IPR029056 Ribokinase-like VFU_RS07445 a937e2e297bfe9f0961517ed5f469bbd 309 Gene3D G3DSA:3.40.1190.20 1 307 2.6E-87 T 21-04-2016 IPR029056 Ribokinase-like VFU_RS07445 a937e2e297bfe9f0961517ed5f469bbd 309 PANTHER PTHR10584 1 307 3.8E-114 T 21-04-2016 VFU_RS07445 a937e2e297bfe9f0961517ed5f469bbd 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 243 256 - T 21-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VFU_RS07445 a937e2e297bfe9f0961517ed5f469bbd 309 Pfam PF00294 pfkB family carbohydrate kinase 1 297 1.7E-72 T 21-04-2016 IPR011611 Carbohydrate kinase PfkB VFU_RS07445 a937e2e297bfe9f0961517ed5f469bbd 309 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 27 51 - T 21-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VFU_RS00670 26eaafcb1f03fd70f8c4d2006a11519e 171 SUPERFAMILY SSF53756 1 160 4.71E-21 T 21-04-2016 VFU_RS00670 26eaafcb1f03fd70f8c4d2006a11519e 171 Pfam PF13439 Glycosyltransferase Family 4 13 151 1.2E-17 T 21-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain VFU_RS15840 5b98646da2a1f1f15b7635f90b118381 145 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 49 144 1.8E-28 T 21-04-2016 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding VFU_RS01825 897aefda232597a3098bb2e360053ee2 400 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 8 369 1.4E-83 T 21-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 VFU_RS01825 897aefda232597a3098bb2e360053ee2 400 Pfam PF07690 Major Facilitator Superfamily 13 344 4.0E-38 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VFU_RS01825 897aefda232597a3098bb2e360053ee2 400 PANTHER PTHR23502 1 400 4.3E-191 T 21-04-2016 VFU_RS01825 897aefda232597a3098bb2e360053ee2 400 Gene3D G3DSA:1.20.1250.20 197 376 1.3E-12 T 21-04-2016 VFU_RS01825 897aefda232597a3098bb2e360053ee2 400 Gene3D G3DSA:1.20.1250.20 8 177 4.7E-24 T 21-04-2016 VFU_RS01825 897aefda232597a3098bb2e360053ee2 400 PANTHER PTHR23502:SF28 1 400 4.3E-191 T 21-04-2016 VFU_RS01825 897aefda232597a3098bb2e360053ee2 400 SUPERFAMILY SSF103473 5 382 1.23E-53 T 21-04-2016 IPR020846 Major facilitator superfamily domain VFU_RS00715 9a281001ff5be51504c587dddc60771b 225 Gene3D G3DSA:2.40.360.10 25 223 3.0E-68 T 21-04-2016 IPR023373 YmcC-like domain VFU_RS00715 9a281001ff5be51504c587dddc60771b 225 Pfam PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF 22 218 6.6E-61 T 21-04-2016 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB VFU_RS00715 9a281001ff5be51504c587dddc60771b 225 SUPERFAMILY SSF159270 27 222 1.27E-57 T 21-04-2016 IPR023373 YmcC-like domain VFU_RS12340 ac3aa9cb1bac9c627da7f120a1176526 199 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 102.507 T 21-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 VFU_RS12340 ac3aa9cb1bac9c627da7f120a1176526 199 PANTHER PTHR30446 1 199 4.8E-113 T 21-04-2016 VFU_RS12340 ac3aa9cb1bac9c627da7f120a1176526 199 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 21-04-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 VFU_RS12340 ac3aa9cb1bac9c627da7f120a1176526 199 Pfam PF13662 Toprim domain 82 172 7.5E-23 T 21-04-2016 IPR006171 Toprim domain VFU_RS12340 ac3aa9cb1bac9c627da7f120a1176526 199 Pfam PF02132 RecR protein 40 77 1.8E-15 T 21-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger VFU_RS12340 ac3aa9cb1bac9c627da7f120a1176526 199 SMART SM00493 81 166 2.4E-17 T 21-04-2016 IPR006171 Toprim domain VFU_RS12340 ac3aa9cb1bac9c627da7f120a1176526 199 SUPERFAMILY SSF111304 2 199 2.09E-71 T 21-04-2016 IPR023627 Recombination protein RecR VFU_RS12340 ac3aa9cb1bac9c627da7f120a1176526 199 PANTHER PTHR30446:SF0 1 199 4.8E-113 T 21-04-2016 VFU_RS12340 ac3aa9cb1bac9c627da7f120a1176526 199 TIGRFAM TIGR00615 recR: recombination protein RecR 3 197 6.4E-77 T 21-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 VFU_RS10650 9b8d5b529851d27fa925bd8f416327bb 210 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 149 196 1.0E-6 T 21-04-2016 VFU_RS10650 9b8d5b529851d27fa925bd8f416327bb 210 Gene3D G3DSA:1.10.10.60 2 55 1.7E-18 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS10650 9b8d5b529851d27fa925bd8f416327bb 210 Gene3D G3DSA:1.10.357.10 56 198 2.1E-26 T 21-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 VFU_RS10650 9b8d5b529851d27fa925bd8f416327bb 210 PANTHER PTHR30055:SF76 1 202 6.0E-27 T 21-04-2016 VFU_RS10650 9b8d5b529851d27fa925bd8f416327bb 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 2.6E-15 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VFU_RS10650 9b8d5b529851d27fa925bd8f416327bb 210 SUPERFAMILY SSF46689 4 80 1.28E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS10650 9b8d5b529851d27fa925bd8f416327bb 210 PANTHER PTHR30055 1 202 6.0E-27 T 21-04-2016 VFU_RS10650 9b8d5b529851d27fa925bd8f416327bb 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 8.6E-8 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VFU_RS10650 9b8d5b529851d27fa925bd8f416327bb 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 8.6E-8 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VFU_RS10650 9b8d5b529851d27fa925bd8f416327bb 210 SUPERFAMILY SSF48498 79 189 6.23E-5 T 21-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal VFU_RS03085 135095b25a65ca4b25b6f90a75044f4f 87 Pfam PF12292 Protein of unknown function (DUF3624) 1 79 5.2E-37 T 21-04-2016 IPR022072 Protein of unknown function DUF3624 VFU_RS14435 1142c3c9e66628168cde1cd04fe6c52c 85 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 10 80 2.1E-19 T 21-04-2016 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 VFU_RS14435 1142c3c9e66628168cde1cd04fe6c52c 85 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 5 82 1.5E-21 T 21-04-2016 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 VFU_RS14435 1142c3c9e66628168cde1cd04fe6c52c 85 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 85 33.569 T 21-04-2016 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 VFU_RS11005 e2579136c6387b87560fea7ebd1defa0 373 Hamap MF_00416 Flagellar P-ring protein [flgI]. 5 373 32.68 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VFU_RS11005 e2579136c6387b87560fea7ebd1defa0 373 Pfam PF02119 Flagellar P-ring protein 27 372 6.3E-118 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VFU_RS11005 e2579136c6387b87560fea7ebd1defa0 373 PANTHER PTHR30381 10 373 1.2E-143 T 21-04-2016 VFU_RS11005 e2579136c6387b87560fea7ebd1defa0 373 PANTHER PTHR30381:SF1 10 373 1.2E-143 T 21-04-2016 VFU_RS11005 e2579136c6387b87560fea7ebd1defa0 373 PRINTS PR01010 Flagellar P-ring protein signature 256 268 4.7E-65 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VFU_RS11005 e2579136c6387b87560fea7ebd1defa0 373 PRINTS PR01010 Flagellar P-ring protein signature 192 210 4.7E-65 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VFU_RS11005 e2579136c6387b87560fea7ebd1defa0 373 PRINTS PR01010 Flagellar P-ring protein signature 26 41 4.7E-65 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VFU_RS11005 e2579136c6387b87560fea7ebd1defa0 373 PRINTS PR01010 Flagellar P-ring protein signature 41 56 4.7E-65 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VFU_RS11005 e2579136c6387b87560fea7ebd1defa0 373 PRINTS PR01010 Flagellar P-ring protein signature 166 184 4.7E-65 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VFU_RS11005 e2579136c6387b87560fea7ebd1defa0 373 PRINTS PR01010 Flagellar P-ring protein signature 60 75 4.7E-65 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VFU_RS11005 e2579136c6387b87560fea7ebd1defa0 373 PRINTS PR01010 Flagellar P-ring protein signature 125 143 4.7E-65 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VFU_RS11005 e2579136c6387b87560fea7ebd1defa0 373 PRINTS PR01010 Flagellar P-ring protein signature 108 125 4.7E-65 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VFU_RS11005 e2579136c6387b87560fea7ebd1defa0 373 PRINTS PR01010 Flagellar P-ring protein signature 86 105 4.7E-65 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VFU_RS16595 271fb7ec772d0e6095996fbc3f806954 164 PANTHER PTHR13710:SF81 2 164 2.4E-43 T 21-04-2016 VFU_RS16595 271fb7ec772d0e6095996fbc3f806954 164 Gene3D G3DSA:1.10.10.10 1 125 7.3E-43 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS16595 271fb7ec772d0e6095996fbc3f806954 164 PANTHER PTHR13710 2 164 2.4E-43 T 21-04-2016 VFU_RS16595 271fb7ec772d0e6095996fbc3f806954 164 Pfam PF09382 RQC domain 17 125 3.7E-39 T 21-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 VFU_RS16595 271fb7ec772d0e6095996fbc3f806954 164 SUPERFAMILY SSF46785 13 131 3.94E-43 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS16595 271fb7ec772d0e6095996fbc3f806954 164 SMART SM00956 22 125 1.9E-50 T 21-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 VFU_RS09320 5ca73eb956fbef9ee8c13fe8f3f95410 475 PANTHER PTHR10422:SF21 3 465 0.0 T 21-04-2016 VFU_RS09320 5ca73eb956fbef9ee8c13fe8f3f95410 475 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 9 466 6.0E-231 T 21-04-2016 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 VFU_RS09320 5ca73eb956fbef9ee8c13fe8f3f95410 475 SUPERFAMILY SSF81442 11 466 9.16E-122 T 21-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 VFU_RS09320 5ca73eb956fbef9ee8c13fe8f3f95410 475 PANTHER PTHR10422 3 465 0.0 T 21-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 VFU_RS09320 5ca73eb956fbef9ee8c13fe8f3f95410 475 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 15 445 2.8E-114 T 21-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 VFU_RS09320 5ca73eb956fbef9ee8c13fe8f3f95410 475 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 205 260 - T 21-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 VFU_RS09320 5ca73eb956fbef9ee8c13fe8f3f95410 475 Gene3D G3DSA:1.20.210.10 9 467 3.4E-70 T 21-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 VFU_RS01750 2702d3ecf59040dafa36b3f70dab2e06 211 PIRSF PIRSF003078 1 210 1.1E-57 T 21-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VFU_RS01750 2702d3ecf59040dafa36b3f70dab2e06 211 Gene3D G3DSA:3.40.50.150 8 209 4.4E-66 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS01750 2702d3ecf59040dafa36b3f70dab2e06 211 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 16 206 28.204 T 21-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VFU_RS01750 2702d3ecf59040dafa36b3f70dab2e06 211 PANTHER PTHR31760:SF0 1 207 1.1E-78 T 21-04-2016 VFU_RS01750 2702d3ecf59040dafa36b3f70dab2e06 211 SUPERFAMILY SSF53335 10 209 1.69E-37 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS01750 2702d3ecf59040dafa36b3f70dab2e06 211 Pfam PF02527 rRNA small subunit methyltransferase G 23 205 6.3E-60 T 21-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VFU_RS01750 2702d3ecf59040dafa36b3f70dab2e06 211 PANTHER PTHR31760 1 207 1.1E-78 T 21-04-2016 VFU_RS01750 2702d3ecf59040dafa36b3f70dab2e06 211 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 29 208 4.6E-55 T 21-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VFU_RS10640 9ce075a1e8701b98e5b03fd996dc47ab 513 SUPERFAMILY SSF103473 246 419 2.44E-22 T 21-04-2016 IPR020846 Major facilitator superfamily domain VFU_RS10640 9ce075a1e8701b98e5b03fd996dc47ab 513 SUPERFAMILY SSF103473 5 191 2.44E-22 T 21-04-2016 IPR020846 Major facilitator superfamily domain VFU_RS10640 9ce075a1e8701b98e5b03fd996dc47ab 513 SUPERFAMILY SSF103473 475 504 2.44E-22 T 21-04-2016 IPR020846 Major facilitator superfamily domain VFU_RS10640 9ce075a1e8701b98e5b03fd996dc47ab 513 Pfam PF07690 Major Facilitator Superfamily 15 409 6.5E-19 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VFU_RS10640 9ce075a1e8701b98e5b03fd996dc47ab 513 Gene3D G3DSA:1.20.1250.20 476 500 1.1E-11 T 21-04-2016 VFU_RS10640 9ce075a1e8701b98e5b03fd996dc47ab 513 Gene3D G3DSA:1.20.1250.20 10 180 7.0E-6 T 21-04-2016 VFU_RS10640 9ce075a1e8701b98e5b03fd996dc47ab 513 Gene3D G3DSA:1.20.1250.20 271 420 1.1E-11 T 21-04-2016 VFU_RS05830 1c17383b0d71b8dd2b061476079684ac 354 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 4 351 5.3E-185 T 21-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VFU_RS05830 1c17383b0d71b8dd2b061476079684ac 354 Gene3D G3DSA:3.30.428.10 178 349 1.6E-75 T 21-04-2016 IPR011146 HIT-like domain GO:0003824 VFU_RS05830 1c17383b0d71b8dd2b061476079684ac 354 PANTHER PTHR11943 1 354 3.7E-215 T 21-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VFU_RS05830 1c17383b0d71b8dd2b061476079684ac 354 PIRSF PIRSF000808 3 345 1.2E-122 T 21-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VFU_RS05830 1c17383b0d71b8dd2b061476079684ac 354 SUPERFAMILY SSF54197 181 349 1.14E-54 T 21-04-2016 IPR011146 HIT-like domain GO:0003824 VFU_RS05830 1c17383b0d71b8dd2b061476079684ac 354 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 6 178 2.6E-66 T 21-04-2016 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VFU_RS05830 1c17383b0d71b8dd2b061476079684ac 354 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 153 170 - T 21-04-2016 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VFU_RS05830 1c17383b0d71b8dd2b061476079684ac 354 PANTHER PTHR11943:SF2 1 354 3.7E-215 T 21-04-2016 VFU_RS05830 1c17383b0d71b8dd2b061476079684ac 354 Gene3D G3DSA:3.30.428.10 47 177 1.3E-55 T 21-04-2016 IPR011146 HIT-like domain GO:0003824 VFU_RS05830 1c17383b0d71b8dd2b061476079684ac 354 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 186 350 3.1E-65 T 21-04-2016 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VFU_RS05830 1c17383b0d71b8dd2b061476079684ac 354 SUPERFAMILY SSF54197 6 179 3.4E-71 T 21-04-2016 IPR011146 HIT-like domain GO:0003824 VFU_RS09490 78ad31af0086049cfed93a7f6139002b 878 PANTHER PTHR30462 1 877 0.0 T 21-04-2016 VFU_RS09490 78ad31af0086049cfed93a7f6139002b 878 Pfam PF02470 MlaD protein 47 138 2.2E-13 T 21-04-2016 IPR003399 Mce/MlaD VFU_RS09490 78ad31af0086049cfed93a7f6139002b 878 Pfam PF02470 MlaD protein 286 375 4.0E-6 T 21-04-2016 IPR003399 Mce/MlaD VFU_RS09490 78ad31af0086049cfed93a7f6139002b 878 Pfam PF02470 MlaD protein 752 807 1.3E-7 T 21-04-2016 IPR003399 Mce/MlaD VFU_RS09490 78ad31af0086049cfed93a7f6139002b 878 Pfam PF02470 MlaD protein 399 461 7.7E-10 T 21-04-2016 IPR003399 Mce/MlaD VFU_RS09490 78ad31af0086049cfed93a7f6139002b 878 Pfam PF02470 MlaD protein 166 226 2.1E-6 T 21-04-2016 IPR003399 Mce/MlaD VFU_RS09490 78ad31af0086049cfed93a7f6139002b 878 PANTHER PTHR30462:SF0 1 877 0.0 T 21-04-2016 VFU_RS00750 bd26b4c1f05cf010469e40f231c251dd 338 Pfam PF07507 WavE lipopolysaccharide synthesis 6 312 1.3E-130 T 21-04-2016 IPR011122 WavE lipopolysaccharide synthesis VFU_RS11050 bd4a24139326afecd31efa3ad9cc6c4f 128 Gene3D G3DSA:2.30.330.10 45 125 8.8E-24 T 21-04-2016 VFU_RS11050 bd4a24139326afecd31efa3ad9cc6c4f 128 PANTHER PTHR30034 43 123 2.7E-14 T 21-04-2016 VFU_RS11050 bd4a24139326afecd31efa3ad9cc6c4f 128 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 53 122 6.1E-19 T 21-04-2016 IPR001543 Surface presentation of antigen (SpoA) VFU_RS11050 bd4a24139326afecd31efa3ad9cc6c4f 128 PRINTS PR00956 Flagellar motor switch protein FliN signature 69 85 6.4E-17 T 21-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VFU_RS11050 bd4a24139326afecd31efa3ad9cc6c4f 128 PRINTS PR00956 Flagellar motor switch protein FliN signature 85 98 6.4E-17 T 21-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VFU_RS11050 bd4a24139326afecd31efa3ad9cc6c4f 128 PRINTS PR00956 Flagellar motor switch protein FliN signature 52 68 6.4E-17 T 21-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VFU_RS11050 bd4a24139326afecd31efa3ad9cc6c4f 128 PRINTS PR00956 Flagellar motor switch protein FliN signature 98 113 6.4E-17 T 21-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VFU_RS11050 bd4a24139326afecd31efa3ad9cc6c4f 128 SUPERFAMILY SSF101801 49 125 5.62E-19 T 21-04-2016 IPR001543 Surface presentation of antigen (SpoA) VFU_RS01945 54ccab05b6e4d799806372126760c82d 394 SUPERFAMILY SSF52540 43 273 1.73E-69 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS01945 54ccab05b6e4d799806372126760c82d 394 Pfam PF00005 ABC transporter 43 195 9.1E-28 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS01945 54ccab05b6e4d799806372126760c82d 394 SMART SM00382 52 253 5.6E-15 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS01945 54ccab05b6e4d799806372126760c82d 394 TIGRFAM TIGR03415 ABC_choXWV_ATP: choline ABC transporter, ATP-binding protein 4 387 2.6E-179 T 21-04-2016 IPR022473 ABC transporter, Choline, ATP-binding subunit GO:0015220|GO:0015871|GO:0055052 VFU_RS01945 54ccab05b6e4d799806372126760c82d 394 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS01945 54ccab05b6e4d799806372126760c82d 394 PANTHER PTHR24220:SF374 40 307 6.8E-140 T 21-04-2016 VFU_RS01945 54ccab05b6e4d799806372126760c82d 394 PANTHER PTHR24220:SF374 5 15 6.8E-140 T 21-04-2016 VFU_RS01945 54ccab05b6e4d799806372126760c82d 394 Gene3D G3DSA:3.40.50.300 3 268 1.1E-68 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS01945 54ccab05b6e4d799806372126760c82d 394 PANTHER PTHR24220 40 307 6.8E-140 T 21-04-2016 VFU_RS01945 54ccab05b6e4d799806372126760c82d 394 PANTHER PTHR24220 5 15 6.8E-140 T 21-04-2016 VFU_RS17170 1dc22f40e514e81344a6ca45721cd1cf 105 PANTHER PTHR30126 1 105 5.5E-47 T 21-04-2016 VFU_RS17170 1dc22f40e514e81344a6ca45721cd1cf 105 Gene3D G3DSA:3.40.190.10 13 83 5.4E-6 T 21-04-2016 VFU_RS17170 1dc22f40e514e81344a6ca45721cd1cf 105 SUPERFAMILY SSF53850 5 85 6.15E-7 T 21-04-2016 VFU_RS17170 1dc22f40e514e81344a6ca45721cd1cf 105 PANTHER PTHR30126:SF18 1 105 5.5E-47 T 21-04-2016 VFU_RS14415 4bf87c9dce3bd1d5fce5202006d86256 153 PANTHER PTHR30353:SF12 20 151 1.0E-50 T 21-04-2016 VFU_RS14415 4bf87c9dce3bd1d5fce5202006d86256 153 PANTHER PTHR30353 20 151 1.0E-50 T 21-04-2016 IPR032818 DedA family VFU_RS14415 4bf87c9dce3bd1d5fce5202006d86256 153 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 22 138 0.003 T 21-04-2016 IPR020143 Uncharacterised protein family, RP436 VFU_RS14415 4bf87c9dce3bd1d5fce5202006d86256 153 Pfam PF09335 SNARE associated Golgi protein 49 149 5.5E-12 T 21-04-2016 IPR032816 SNARE associated Golgi protein VFU_RS10735 e7cac517ad8f8fec47b59e7068434dfa 104 Pfam PF13642 protein structure with unknown function 4 101 2.3E-34 T 21-04-2016 IPR025284 Protein of unknown function DUF4144 VFU_RS00990 c1bc53adba045a702bd54d941316bf0d 123 PIRSF PIRSF028299 3 123 1.2E-27 T 21-04-2016 IPR016879 Uncharacterised conserved protein UCP028299 VFU_RS00990 c1bc53adba045a702bd54d941316bf0d 123 Pfam PF11777 Protein of unknown function (DUF3316) 5 117 6.7E-20 T 21-04-2016 IPR016879 Uncharacterised conserved protein UCP028299 VFU_RS07915 81158fe3271e8814235213a7678870c7 426 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 425 2.1E-143 T 21-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 VFU_RS07915 81158fe3271e8814235213a7678870c7 426 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 21-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 VFU_RS07915 81158fe3271e8814235213a7678870c7 426 Gene3D G3DSA:3.65.10.10 22 238 1.4E-70 T 21-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 VFU_RS07915 81158fe3271e8814235213a7678870c7 426 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 21-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 VFU_RS07915 81158fe3271e8814235213a7678870c7 426 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 420 4.8E-155 T 21-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 VFU_RS07915 81158fe3271e8814235213a7678870c7 426 SUPERFAMILY SSF55205 1 424 2.09E-143 T 21-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 VFU_RS07915 81158fe3271e8814235213a7678870c7 426 PANTHER PTHR21090 1 425 7.5E-214 T 21-04-2016 VFU_RS07915 81158fe3271e8814235213a7678870c7 426 PIRSF PIRSF000505 1 426 3.1E-156 T 21-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 VFU_RS07915 81158fe3271e8814235213a7678870c7 426 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 426 34.245 T 21-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 VFU_RS07915 81158fe3271e8814235213a7678870c7 426 Gene3D G3DSA:3.65.10.10 239 424 3.6E-75 T 21-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 VFU_RS11640 f2018acbcfb519b58b4812c97e99f648 429 SUPERFAMILY SSF51905 163 347 3.94E-26 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS11640 f2018acbcfb519b58b4812c97e99f648 429 Gene3D G3DSA:3.50.50.60 180 342 2.7E-28 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS11640 f2018acbcfb519b58b4812c97e99f648 429 SUPERFAMILY SSF51905 3 219 8.27E-29 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS11640 f2018acbcfb519b58b4812c97e99f648 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 9.5E-14 T 21-04-2016 VFU_RS11640 f2018acbcfb519b58b4812c97e99f648 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 9.5E-14 T 21-04-2016 VFU_RS11640 f2018acbcfb519b58b4812c97e99f648 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 167 185 9.5E-14 T 21-04-2016 VFU_RS11640 f2018acbcfb519b58b4812c97e99f648 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 9.5E-14 T 21-04-2016 VFU_RS11640 f2018acbcfb519b58b4812c97e99f648 429 Gene3D G3DSA:3.50.50.60 3 179 5.8E-24 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS11640 f2018acbcfb519b58b4812c97e99f648 429 PANTHER PTHR22912 2 187 7.8E-25 T 21-04-2016 VFU_RS11640 f2018acbcfb519b58b4812c97e99f648 429 PANTHER PTHR22912 203 341 7.8E-25 T 21-04-2016 VFU_RS11640 f2018acbcfb519b58b4812c97e99f648 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 4.0E-7 T 21-04-2016 VFU_RS11640 f2018acbcfb519b58b4812c97e99f648 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 4.0E-7 T 21-04-2016 VFU_RS11640 f2018acbcfb519b58b4812c97e99f648 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 167 192 4.0E-7 T 21-04-2016 VFU_RS11640 f2018acbcfb519b58b4812c97e99f648 429 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 333 2.1E-64 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS11640 f2018acbcfb519b58b4812c97e99f648 429 PANTHER PTHR22912:SF140 2 187 7.8E-25 T 21-04-2016 VFU_RS11640 f2018acbcfb519b58b4812c97e99f648 429 PANTHER PTHR22912:SF140 203 341 7.8E-25 T 21-04-2016 VFU_RS02625 a49674515857625ddb66e831db014ea7 252 Pfam PF01203 Type II secretion system (T2SS), protein N 36 246 9.2E-55 T 21-04-2016 IPR022792 Type II secretion system, protein N VFU_RS06400 9d52b187627a1bdfb103770644c359c1 320 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 2.4E-15 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS06400 9d52b187627a1bdfb103770644c359c1 320 PANTHER PTHR30118:SF11 1 315 5.1E-165 T 21-04-2016 VFU_RS06400 9d52b187627a1bdfb103770644c359c1 320 PANTHER PTHR30118 1 315 5.1E-165 T 21-04-2016 VFU_RS06400 9d52b187627a1bdfb103770644c359c1 320 SUPERFAMILY SSF53850 98 314 3.1E-25 T 21-04-2016 VFU_RS06400 9d52b187627a1bdfb103770644c359c1 320 Gene3D G3DSA:3.40.190.10 182 279 1.3E-22 T 21-04-2016 VFU_RS06400 9d52b187627a1bdfb103770644c359c1 320 SUPERFAMILY SSF46785 6 87 3.18E-17 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS06400 9d52b187627a1bdfb103770644c359c1 320 Pfam PF03466 LysR substrate binding domain 104 312 1.0E-14 T 21-04-2016 IPR005119 LysR, substrate-binding VFU_RS06400 9d52b187627a1bdfb103770644c359c1 320 Gene3D G3DSA:3.40.190.10 98 181 1.2E-12 T 21-04-2016 VFU_RS06400 9d52b187627a1bdfb103770644c359c1 320 Gene3D G3DSA:3.40.190.10 290 317 1.2E-12 T 21-04-2016 VFU_RS06400 9d52b187627a1bdfb103770644c359c1 320 Gene3D G3DSA:1.10.10.10 2 88 5.7E-25 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS10990 99ce679f09666d4c6e5662c733ad63c4 296 Pfam PF00669 Bacterial flagellin N-terminal helical region 9 138 6.6E-11 T 21-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VFU_RS10990 99ce679f09666d4c6e5662c733ad63c4 296 Gene3D G3DSA:1.20.1330.10 54 246 3.1E-11 T 21-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VFU_RS10990 99ce679f09666d4c6e5662c733ad63c4 296 PANTHER PTHR30244 1 296 2.1E-29 T 21-04-2016 VFU_RS10990 99ce679f09666d4c6e5662c733ad63c4 296 SUPERFAMILY SSF64518 1 295 6.02E-39 T 21-04-2016 VFU_RS10990 99ce679f09666d4c6e5662c733ad63c4 296 PANTHER PTHR30244:SF5 1 296 2.1E-29 T 21-04-2016 VFU_RS06310 9df9415bb3ae326d38e512fc6c405dbb 184 PANTHER PTHR10681:SF107 1 178 1.2E-72 T 21-04-2016 VFU_RS06310 9df9415bb3ae326d38e512fc6c405dbb 184 Pfam PF08534 Redoxin 41 164 3.5E-25 T 21-04-2016 IPR013740 Redoxin GO:0016491 VFU_RS06310 9df9415bb3ae326d38e512fc6c405dbb 184 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 176 2.0E-70 T 21-04-2016 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 VFU_RS06310 9df9415bb3ae326d38e512fc6c405dbb 184 SUPERFAMILY SSF52833 46 178 4.13E-39 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS06310 9df9415bb3ae326d38e512fc6c405dbb 184 PANTHER PTHR10681 1 178 1.2E-72 T 21-04-2016 VFU_RS06310 9df9415bb3ae326d38e512fc6c405dbb 184 ProSitePatterns PS00194 Thioredoxin family active site. 71 89 - T 21-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 VFU_RS06310 9df9415bb3ae326d38e512fc6c405dbb 184 Gene3D G3DSA:3.40.30.10 10 177 2.7E-41 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS09460 06aae231c8ce49234fc24cfd70456221 276 Pfam PF08668 HDOD domain 13 204 5.4E-54 T 21-04-2016 IPR013976 Metal-dependent hydrolase HDOD VFU_RS09460 06aae231c8ce49234fc24cfd70456221 276 Gene3D G3DSA:1.10.3150.10 5 236 1.3E-65 T 21-04-2016 IPR013976 Metal-dependent hydrolase HDOD VFU_RS09460 06aae231c8ce49234fc24cfd70456221 276 PANTHER PTHR33525:SF3 1 228 4.0E-49 T 21-04-2016 VFU_RS09460 06aae231c8ce49234fc24cfd70456221 276 PANTHER PTHR33525 1 228 4.0E-49 T 21-04-2016 VFU_RS09460 06aae231c8ce49234fc24cfd70456221 276 SUPERFAMILY SSF109604 6 233 5.71E-57 T 21-04-2016 VFU_RS13115 9c4550206fc60576b5a7842c459b44e4 177 Pfam PF13302 Acetyltransferase (GNAT) domain 30 141 2.4E-15 T 21-04-2016 IPR000182 GNAT domain GO:0008080 VFU_RS13115 9c4550206fc60576b5a7842c459b44e4 177 Gene3D G3DSA:3.40.630.30 3 162 7.4E-24 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase VFU_RS13115 9c4550206fc60576b5a7842c459b44e4 177 PANTHER PTHR13256 1 150 1.1E-16 T 21-04-2016 VFU_RS13115 9c4550206fc60576b5a7842c459b44e4 177 SUPERFAMILY SSF55729 3 150 1.93E-23 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase VFU_RS14060 f378451535277ff4d57c0f16b84a947d 161 PANTHER PTHR33254:SF1 5 161 7.4E-85 T 21-04-2016 VFU_RS14060 f378451535277ff4d57c0f16b84a947d 161 PANTHER PTHR33254 5 161 7.4E-85 T 21-04-2016 VFU_RS14060 f378451535277ff4d57c0f16b84a947d 161 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 1.5E-69 T 21-04-2016 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 VFU_RS14060 f378451535277ff4d57c0f16b84a947d 161 Pfam PF03737 Demethylmenaquinone methyltransferase 5 152 4.9E-43 T 21-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VFU_RS14060 f378451535277ff4d57c0f16b84a947d 161 Gene3D G3DSA:3.50.30.40 5 158 2.1E-50 T 21-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VFU_RS14060 f378451535277ff4d57c0f16b84a947d 161 SUPERFAMILY SSF89562 1 158 9.55E-49 T 21-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VFU_RS07325 0df4dcf70786b514ce20f9b1ad7836d9 242 Gene3D G3DSA:3.90.470.20 124 214 4.0E-8 T 21-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 VFU_RS07325 0df4dcf70786b514ce20f9b1ad7836d9 242 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 123 218 1.7E-11 T 21-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 VFU_RS07325 0df4dcf70786b514ce20f9b1ad7836d9 242 PANTHER PTHR38096 10 235 6.4E-48 T 21-04-2016 VFU_RS07325 0df4dcf70786b514ce20f9b1ad7836d9 242 PRINTS PR01399 Enterobactin synthetase component D signature 85 103 3.4E-16 T 21-04-2016 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 UniPathway: UPA00017 VFU_RS07325 0df4dcf70786b514ce20f9b1ad7836d9 242 PRINTS PR01399 Enterobactin synthetase component D signature 55 75 3.4E-16 T 21-04-2016 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 UniPathway: UPA00017 VFU_RS07325 0df4dcf70786b514ce20f9b1ad7836d9 242 PRINTS PR01399 Enterobactin synthetase component D signature 166 182 3.4E-16 T 21-04-2016 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 UniPathway: UPA00017 VFU_RS07325 0df4dcf70786b514ce20f9b1ad7836d9 242 SUPERFAMILY SSF56214 123 236 1.45E-13 T 21-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 VFU_RS12510 148123ad16afb54844d169b0cf07a00f 112 Gene3D G3DSA:1.20.120.160 2 111 9.7E-24 T 21-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VFU_RS12510 148123ad16afb54844d169b0cf07a00f 112 Pfam PF01627 Hpt domain 24 81 1.3E-7 T 21-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VFU_RS12510 148123ad16afb54844d169b0cf07a00f 112 SUPERFAMILY SSF47226 2 110 2.36E-19 T 21-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VFU_RS12445 0b3be0f91dd6c27cd5193247c3dc8d0c 358 Hamap MF_02040 Iron-sulfur cluster carrier protein. 89 338 36.501 T 21-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein VFU_RS12445 0b3be0f91dd6c27cd5193247c3dc8d0c 358 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 94 337 3.0E-99 T 21-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein VFU_RS12445 0b3be0f91dd6c27cd5193247c3dc8d0c 358 ProSitePatterns PS01215 Mrp family signature. 201 217 - T 21-04-2016 IPR000808 Mrp, conserved site GO:0005524 VFU_RS12445 0b3be0f91dd6c27cd5193247c3dc8d0c 358 Gene3D G3DSA:3.40.50.300 86 336 1.2E-104 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS12445 0b3be0f91dd6c27cd5193247c3dc8d0c 358 PANTHER PTHR23264:SF19 1 354 4.2E-163 T 21-04-2016 VFU_RS12445 0b3be0f91dd6c27cd5193247c3dc8d0c 358 SUPERFAMILY SSF52540 96 343 6.23E-57 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS12445 0b3be0f91dd6c27cd5193247c3dc8d0c 358 PANTHER PTHR23264 1 354 4.2E-163 T 21-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein VFU_RS01145 ff0a87168ecec3a2e698311c55a2ca91 100 Pfam PF12305 Protein of unknown function (DUF3630) 4 96 3.6E-37 T 21-04-2016 IPR022080 Protein of unknown function DUF3630 VFU_RS10270 edcf86f6bf0c301dfe8491b63c0019f8 331 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 3 329 30.443 T 21-04-2016 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 VFU_RS10270 edcf86f6bf0c301dfe8491b63c0019f8 331 Gene3D G3DSA:1.10.3470.10 9 327 1.1E-92 T 21-04-2016 IPR029022 ABC transporter, BtuC-like VFU_RS10270 edcf86f6bf0c301dfe8491b63c0019f8 331 SUPERFAMILY SSF81345 7 326 1.23E-78 T 21-04-2016 IPR029022 ABC transporter, BtuC-like VFU_RS10270 edcf86f6bf0c301dfe8491b63c0019f8 331 PANTHER PTHR30472:SF29 1 331 1.2E-166 T 21-04-2016 VFU_RS10270 edcf86f6bf0c301dfe8491b63c0019f8 331 Pfam PF01032 FecCD transport family 21 326 1.9E-81 T 21-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 VFU_RS10270 edcf86f6bf0c301dfe8491b63c0019f8 331 PANTHER PTHR30472 1 331 1.2E-166 T 21-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 VFU_RS07765 004a18c8fdbab5bfb50779f59ef33ba8 180 Pfam PF11086 Protein of unknown function (DUF2878) 5 150 2.0E-28 T 21-04-2016 IPR021306 Protein of unknown function DUF2878 VFU_RS14145 1d2986876f4c2b0cb3d9575b503b01bb 185 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 21-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 VFU_RS14145 1d2986876f4c2b0cb3d9575b503b01bb 185 PANTHER PTHR30546:SF0 1 185 2.3E-23 T 21-04-2016 VFU_RS14145 1d2986876f4c2b0cb3d9575b503b01bb 185 Pfam PF03358 NADPH-dependent FMN reductase 10 132 1.6E-17 T 21-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 VFU_RS14145 1d2986876f4c2b0cb3d9575b503b01bb 185 SUPERFAMILY SSF52218 1 183 1.44E-42 T 21-04-2016 IPR029039 Flavoprotein-like domain VFU_RS14145 1d2986876f4c2b0cb3d9575b503b01bb 185 PANTHER PTHR30546 1 185 2.3E-23 T 21-04-2016 VFU_RS14145 1d2986876f4c2b0cb3d9575b503b01bb 185 Gene3D G3DSA:3.40.50.360 1 184 5.7E-50 T 21-04-2016 IPR029039 Flavoprotein-like domain VFU_RS06865 e4191ea0c965999ac2179343068df581 85 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 5 53 8.2E-11 T 21-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM VFU_RS06865 e4191ea0c965999ac2179343068df581 85 SUPERFAMILY SSF143120 1 75 4.45E-16 T 21-04-2016 VFU_RS06865 e4191ea0c965999ac2179343068df581 85 Gene3D G3DSA:3.40.1620.10 23 49 3.0E-7 T 21-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM VFU_RS06865 e4191ea0c965999ac2179343068df581 85 PANTHER PTHR33713:SF3 1 85 3.5E-62 T 21-04-2016 VFU_RS06865 e4191ea0c965999ac2179343068df581 85 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 72 2.9E-14 T 21-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM VFU_RS06865 e4191ea0c965999ac2179343068df581 85 PANTHER PTHR33713 1 85 3.5E-62 T 21-04-2016 VFU_RS01620 50c35cd009f8d56591c90cedbe0368b8 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 243 4.5E-34 T 21-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS01620 50c35cd009f8d56591c90cedbe0368b8 366 SUPERFAMILY SSF55979 126 244 2.07E-28 T 21-04-2016 VFU_RS01620 50c35cd009f8d56591c90cedbe0368b8 366 SUPERFAMILY SSF55979 1 118 4.4E-28 T 21-04-2016 VFU_RS01620 50c35cd009f8d56591c90cedbe0368b8 366 Gene3D G3DSA:3.10.150.10 1 121 1.8E-32 T 21-04-2016 VFU_RS01620 50c35cd009f8d56591c90cedbe0368b8 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 3.9E-39 T 21-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS01620 50c35cd009f8d56591c90cedbe0368b8 366 Gene3D G3DSA:3.10.150.10 249 366 1.0E-38 T 21-04-2016 VFU_RS01620 50c35cd009f8d56591c90cedbe0368b8 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 7.7E-107 T 21-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS01620 50c35cd009f8d56591c90cedbe0368b8 366 SMART SM00480 17 362 1.8E-143 T 21-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS01620 50c35cd009f8d56591c90cedbe0368b8 366 Gene3D G3DSA:3.10.150.10 122 248 3.5E-36 T 21-04-2016 VFU_RS01620 50c35cd009f8d56591c90cedbe0368b8 366 PANTHER PTHR30478 2 366 3.7E-144 T 21-04-2016 VFU_RS01620 50c35cd009f8d56591c90cedbe0368b8 366 PIRSF PIRSF000804 1 366 6.3E-117 T 21-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS01620 50c35cd009f8d56591c90cedbe0368b8 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 1.3E-37 T 21-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS01620 50c35cd009f8d56591c90cedbe0368b8 366 SUPERFAMILY SSF55979 245 366 6.28E-37 T 21-04-2016 VFU_RS02175 bfbfa056afcd62d9f94868bd7dfff45a 212 Gene3D G3DSA:3.40.50.150 73 203 2.1E-16 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS02175 bfbfa056afcd62d9f94868bd7dfff45a 212 Pfam PF13489 Methyltransferase domain 61 198 3.0E-21 T 21-04-2016 VFU_RS02175 bfbfa056afcd62d9f94868bd7dfff45a 212 SUPERFAMILY SSF53335 46 198 3.13E-21 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS17140 938cfa88ecfc186a0993b73e518bdaff 226 PANTHER PTHR15184:SF44 1 222 7.2E-171 T 21-04-2016 VFU_RS17140 938cfa88ecfc186a0993b73e518bdaff 226 PANTHER PTHR15184 1 222 7.2E-171 T 21-04-2016 VFU_RS17140 938cfa88ecfc186a0993b73e518bdaff 226 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 2 135 4.8E-41 T 21-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VFU_RS17140 938cfa88ecfc186a0993b73e518bdaff 226 SUPERFAMILY SSF47917 138 225 3.92E-39 T 21-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VFU_RS17140 938cfa88ecfc186a0993b73e518bdaff 226 Gene3D G3DSA:3.40.50.300 2 136 2.9E-56 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS17140 938cfa88ecfc186a0993b73e518bdaff 226 Gene3D G3DSA:1.10.1140.10 138 225 2.4E-40 T 21-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VFU_RS17140 938cfa88ecfc186a0993b73e518bdaff 226 SUPERFAMILY SSF52540 2 141 1.06E-46 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS17140 938cfa88ecfc186a0993b73e518bdaff 226 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 126 135 - T 21-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VFU_RS07280 6e70d9a07b4a3f1913606a3d6e495c81 449 PANTHER PTHR24095 11 432 4.3E-39 T 21-04-2016 VFU_RS07280 6e70d9a07b4a3f1913606a3d6e495c81 449 SUPERFAMILY SSF52777 13 188 3.56E-28 T 21-04-2016 VFU_RS07280 6e70d9a07b4a3f1913606a3d6e495c81 449 Pfam PF00668 Condensation domain 11 308 2.3E-35 T 21-04-2016 IPR001242 Condensation domain VFU_RS07280 6e70d9a07b4a3f1913606a3d6e495c81 449 PANTHER PTHR24095:SF137 11 432 4.3E-39 T 21-04-2016 VFU_RS07280 6e70d9a07b4a3f1913606a3d6e495c81 449 SUPERFAMILY SSF52777 194 432 8.56E-28 T 21-04-2016 VFU_RS02180 0239afdb068d634f4da1aebe72aa1a90 184 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 177 16.023 T 21-04-2016 IPR007336 Der GTPase activator VFU_RS02180 0239afdb068d634f4da1aebe72aa1a90 184 Pfam PF04220 Der GTPase activator (YihI) 19 174 1.5E-44 T 21-04-2016 IPR007336 Der GTPase activator VFU_RS13645 c40d6ac00af67e4bb1425357a66f2ba9 733 PANTHER PTHR30425 380 499 3.8E-157 T 21-04-2016 VFU_RS13645 c40d6ac00af67e4bb1425357a66f2ba9 733 PANTHER PTHR30425 564 733 3.8E-157 T 21-04-2016 VFU_RS13645 c40d6ac00af67e4bb1425357a66f2ba9 733 PANTHER PTHR30425 1 52 3.8E-157 T 21-04-2016 VFU_RS13645 c40d6ac00af67e4bb1425357a66f2ba9 733 SUPERFAMILY SSF161098 579 670 8.18E-20 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS13645 c40d6ac00af67e4bb1425357a66f2ba9 733 SUPERFAMILY SSF161098 429 496 8.18E-20 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS13645 c40d6ac00af67e4bb1425357a66f2ba9 733 PANTHER PTHR30425:SF3 380 499 3.8E-157 T 21-04-2016 VFU_RS13645 c40d6ac00af67e4bb1425357a66f2ba9 733 PANTHER PTHR30425:SF3 564 733 3.8E-157 T 21-04-2016 VFU_RS13645 c40d6ac00af67e4bb1425357a66f2ba9 733 PANTHER PTHR30425:SF3 1 52 3.8E-157 T 21-04-2016 VFU_RS13645 c40d6ac00af67e4bb1425357a66f2ba9 733 Gene3D G3DSA:2.130.10.10 71 134 9.3E-6 T 21-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 VFU_RS13645 c40d6ac00af67e4bb1425357a66f2ba9 733 Gene3D G3DSA:2.130.10.10 359 388 9.3E-6 T 21-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 VFU_RS13645 c40d6ac00af67e4bb1425357a66f2ba9 733 Gene3D G3DSA:2.130.10.10 274 275 9.3E-6 T 21-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 VFU_RS13645 c40d6ac00af67e4bb1425357a66f2ba9 733 Gene3D G3DSA:2.130.10.10 197 242 9.3E-6 T 21-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 VFU_RS13645 c40d6ac00af67e4bb1425357a66f2ba9 733 SUPERFAMILY SSF69322 59 388 3.14E-9 T 21-04-2016 VFU_RS13645 c40d6ac00af67e4bb1425357a66f2ba9 733 Gene3D G3DSA:1.10.3720.10 33 54 7.9E-12 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS13645 c40d6ac00af67e4bb1425357a66f2ba9 733 Gene3D G3DSA:1.10.3720.10 500 731 9.2E-35 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS13645 c40d6ac00af67e4bb1425357a66f2ba9 733 Gene3D G3DSA:1.10.3720.10 415 494 7.9E-12 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS13645 c40d6ac00af67e4bb1425357a66f2ba9 733 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 451 727 2.4E-13 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS06585 3ab439a9a648b851952f8225e3f0c31f 395 Pfam PF01734 Patatin-like phospholipase 29 198 1.1E-15 T 21-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 VFU_RS06585 3ab439a9a648b851952f8225e3f0c31f 395 PANTHER PTHR14226:SF25 288 378 5.3E-68 T 21-04-2016 VFU_RS06585 3ab439a9a648b851952f8225e3f0c31f 395 PANTHER PTHR14226:SF25 12 220 5.3E-68 T 21-04-2016 VFU_RS06585 3ab439a9a648b851952f8225e3f0c31f 395 PANTHER PTHR14226 288 378 5.3E-68 T 21-04-2016 VFU_RS06585 3ab439a9a648b851952f8225e3f0c31f 395 PANTHER PTHR14226 12 220 5.3E-68 T 21-04-2016 VFU_RS06585 3ab439a9a648b851952f8225e3f0c31f 395 SUPERFAMILY SSF52151 25 264 6.8E-33 T 21-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 VFU_RS12415 f88e1e8c5236689114266ae908edf059 147 SMART SM00226 2 140 5.7E-34 T 21-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily VFU_RS12415 f88e1e8c5236689114266ae908edf059 147 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 71 86 7.7E-11 T 21-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VFU_RS12415 f88e1e8c5236689114266ae908edf059 147 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 37 53 7.7E-11 T 21-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VFU_RS12415 f88e1e8c5236689114266ae908edf059 147 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 112 127 7.7E-11 T 21-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VFU_RS12415 f88e1e8c5236689114266ae908edf059 147 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 1 138 2.1E-34 T 21-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily VFU_RS12415 f88e1e8c5236689114266ae908edf059 147 PANTHER PTHR11717 1 146 1.9E-51 T 21-04-2016 VFU_RS12415 f88e1e8c5236689114266ae908edf059 147 PANTHER PTHR11717:SF7 1 146 1.9E-51 T 21-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VFU_RS12415 f88e1e8c5236689114266ae908edf059 147 Gene3D G3DSA:3.40.50.270 1 141 6.5E-45 T 21-04-2016 VFU_RS12415 f88e1e8c5236689114266ae908edf059 147 SUPERFAMILY SSF52788 1 138 7.06E-43 T 21-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily VFU_RS03860 a2a897b677385a4838bb916b842fa29d 222 Gene3D G3DSA:3.30.420.10 123 201 6.0E-8 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VFU_RS03860 a2a897b677385a4838bb916b842fa29d 222 Gene3D G3DSA:3.40.970.10 7 52 3.4E-4 T 21-04-2016 IPR011320 Ribonuclease H1, N-terminal VFU_RS03860 a2a897b677385a4838bb916b842fa29d 222 SUPERFAMILY SSF53098 123 202 2.73E-6 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VFU_RS22655 a9b3a12bc8ba02c6f30ae4822408dbf0 310 PANTHER PTHR32196 9 308 4.9E-142 T 21-04-2016 VFU_RS22655 a9b3a12bc8ba02c6f30ae4822408dbf0 310 Pfam PF02653 Branched-chain amino acid transport system / permease component 15 276 2.6E-28 T 21-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 VFU_RS22655 a9b3a12bc8ba02c6f30ae4822408dbf0 310 PANTHER PTHR32196:SF27 9 308 4.9E-142 T 21-04-2016 VFU_RS15095 1dee9b22822326b2d3c89c4b4c333ee0 1293 Pfam PF13502 AsmA-like C-terminal region 1031 1271 2.6E-57 T 21-04-2016 IPR032712 AsmA-like, C-terminal VFU_RS15095 1dee9b22822326b2d3c89c4b4c333ee0 1293 PANTHER PTHR38690 1 1290 0.0 T 21-04-2016 VFU_RS15095 1dee9b22822326b2d3c89c4b4c333ee0 1293 Pfam PF13116 Protein of unknown function 505 791 1.7E-95 T 21-04-2016 IPR025263 Domain of unknown function DUF3971 VFU_RS15095 1dee9b22822326b2d3c89c4b4c333ee0 1293 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 7 1281 0.0 T 21-04-2016 IPR011836 Conserved hypothetical protein CHP02099 VFU_RS15225 a2e0e16fd4d9e44427f64a029115d691 289 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 263 8.0E-125 T 21-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 VFU_RS15225 a2e0e16fd4d9e44427f64a029115d691 289 PANTHER PTHR22572:SF14 4 279 3.1E-102 T 21-04-2016 VFU_RS15225 a2e0e16fd4d9e44427f64a029115d691 289 SUPERFAMILY SSF53448 2 269 8.14E-65 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VFU_RS15225 a2e0e16fd4d9e44427f64a029115d691 289 Pfam PF00483 Nucleotidyl transferase 9 265 2.3E-32 T 21-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 VFU_RS15225 a2e0e16fd4d9e44427f64a029115d691 289 PANTHER PTHR22572 4 279 3.1E-102 T 21-04-2016 VFU_RS15225 a2e0e16fd4d9e44427f64a029115d691 289 Gene3D G3DSA:3.90.550.10 3 269 3.1E-67 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VFU_RS09575 c914756fff0a78afb285d5f7675b35ae 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 2.5E-33 T 21-04-2016 IPR008514 Type VI secretion system effector, Hcp VFU_RS09575 c914756fff0a78afb285d5f7675b35ae 172 SUPERFAMILY SSF141452 3 169 2.62E-39 T 21-04-2016 IPR008514 Type VI secretion system effector, Hcp VFU_RS09575 c914756fff0a78afb285d5f7675b35ae 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 6.6E-64 T 21-04-2016 IPR008514 Type VI secretion system effector, Hcp VFU_RS09575 c914756fff0a78afb285d5f7675b35ae 172 Gene3D G3DSA:2.30.110.20 1 167 1.7E-33 T 21-04-2016 IPR008514 Type VI secretion system effector, Hcp VFU_RS09575 c914756fff0a78afb285d5f7675b35ae 172 PANTHER PTHR34319 1 172 3.8E-75 T 21-04-2016 VFU_RS10790 0eb3f2b966a53b605b746508ac909815 506 PANTHER PTHR11819 3 488 3.5E-62 T 21-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 VFU_RS10790 0eb3f2b966a53b605b746508ac909815 506 Pfam PF00474 Sodium:solute symporter family 34 416 4.9E-44 T 21-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 VFU_RS19450 304e486b426718d8191489c29b159f97 203 SMART SM00387 1 131 9.2E-7 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS19450 304e486b426718d8191489c29b159f97 203 PRINTS PR00418 DNA topoisomerase II family signature 24 37 2.7E-11 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS19450 304e486b426718d8191489c29b159f97 203 PRINTS PR00418 DNA topoisomerase II family signature 67 81 2.7E-11 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS19450 304e486b426718d8191489c29b159f97 203 SUPERFAMILY SSF55874 1 173 1.47E-52 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS19450 304e486b426718d8191489c29b159f97 203 SMART SM00433 1 203 4.1E-6 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VFU_RS19450 304e486b426718d8191489c29b159f97 203 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 3 128 3.1E-15 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS19450 304e486b426718d8191489c29b159f97 203 PANTHER PTHR10169:SF45 1 203 2.3E-131 T 21-04-2016 VFU_RS19450 304e486b426718d8191489c29b159f97 203 PANTHER PTHR10169 1 203 2.3E-131 T 21-04-2016 VFU_RS19450 304e486b426718d8191489c29b159f97 203 PRINTS PR01098 Topoisomerase IV subunit B signature 93 107 4.6E-31 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VFU_RS19450 304e486b426718d8191489c29b159f97 203 PRINTS PR01098 Topoisomerase IV subunit B signature 196 203 4.6E-31 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VFU_RS19450 304e486b426718d8191489c29b159f97 203 PRINTS PR01098 Topoisomerase IV subunit B signature 107 122 4.6E-31 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VFU_RS19450 304e486b426718d8191489c29b159f97 203 PRINTS PR01098 Topoisomerase IV subunit B signature 132 149 4.6E-31 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VFU_RS19450 304e486b426718d8191489c29b159f97 203 PRINTS PR01098 Topoisomerase IV subunit B signature 150 171 4.6E-31 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VFU_RS19450 304e486b426718d8191489c29b159f97 203 Gene3D G3DSA:3.30.565.10 1 170 9.8E-63 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VFU_RS11350 369e7df93dac6fe010099e0f1dd54c2d 149 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 15 142 1.0E-62 T 21-04-2016 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 VFU_RS11350 369e7df93dac6fe010099e0f1dd54c2d 149 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 2 145 30.597 T 21-04-2016 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 VFU_RS11350 369e7df93dac6fe010099e0f1dd54c2d 149 Pfam PF06610 L-alanine exporter 8 142 9.2E-67 T 21-04-2016 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 VFU_RS05555 467bffb250c8515bf76bd83d38f98f1a 361 PANTHER PTHR30381 1 361 6.0E-219 T 21-04-2016 VFU_RS05555 467bffb250c8515bf76bd83d38f98f1a 361 PRINTS PR01010 Flagellar P-ring protein signature 184 202 7.6E-85 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VFU_RS05555 467bffb250c8515bf76bd83d38f98f1a 361 PRINTS PR01010 Flagellar P-ring protein signature 35 50 7.6E-85 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VFU_RS05555 467bffb250c8515bf76bd83d38f98f1a 361 PRINTS PR01010 Flagellar P-ring protein signature 117 135 7.6E-85 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VFU_RS05555 467bffb250c8515bf76bd83d38f98f1a 361 PRINTS PR01010 Flagellar P-ring protein signature 158 176 7.6E-85 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VFU_RS05555 467bffb250c8515bf76bd83d38f98f1a 361 PRINTS PR01010 Flagellar P-ring protein signature 52 67 7.6E-85 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VFU_RS05555 467bffb250c8515bf76bd83d38f98f1a 361 PRINTS PR01010 Flagellar P-ring protein signature 100 117 7.6E-85 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VFU_RS05555 467bffb250c8515bf76bd83d38f98f1a 361 PRINTS PR01010 Flagellar P-ring protein signature 20 35 7.6E-85 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VFU_RS05555 467bffb250c8515bf76bd83d38f98f1a 361 PRINTS PR01010 Flagellar P-ring protein signature 248 260 7.6E-85 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VFU_RS05555 467bffb250c8515bf76bd83d38f98f1a 361 PRINTS PR01010 Flagellar P-ring protein signature 78 97 7.6E-85 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VFU_RS05555 467bffb250c8515bf76bd83d38f98f1a 361 Hamap MF_00416 Flagellar P-ring protein [flgI]. 3 361 39.691 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VFU_RS05555 467bffb250c8515bf76bd83d38f98f1a 361 Pfam PF02119 Flagellar P-ring protein 20 360 4.2E-136 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VFU_RS05555 467bffb250c8515bf76bd83d38f98f1a 361 PANTHER PTHR30381:SF1 1 361 6.0E-219 T 21-04-2016 VFU_RS09760 26e572976fd3d7455a0e146e9ea4bc6e 306 PANTHER PTHR23024:SF24 49 304 5.5E-67 T 21-04-2016 VFU_RS09760 26e572976fd3d7455a0e146e9ea4bc6e 306 Pfam PF07859 alpha/beta hydrolase fold 81 284 4.1E-63 T 21-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 VFU_RS09760 26e572976fd3d7455a0e146e9ea4bc6e 306 PANTHER PTHR23024 49 304 5.5E-67 T 21-04-2016 VFU_RS09760 26e572976fd3d7455a0e146e9ea4bc6e 306 SUPERFAMILY SSF53474 24 304 2.73E-59 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold VFU_RS09760 26e572976fd3d7455a0e146e9ea4bc6e 306 Gene3D G3DSA:3.40.50.1820 7 304 5.6E-81 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold VFU_RS14360 1de4a4004227e20ab86b3fbaa1c7a0d2 117 PIRSF PIRSF002191 1 117 6.3E-52 T 21-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS14360 1de4a4004227e20ab86b3fbaa1c7a0d2 117 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 2.8E-52 T 21-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS14360 1de4a4004227e20ab86b3fbaa1c7a0d2 117 Pfam PF01245 Ribosomal protein L19 3 113 3.9E-51 T 21-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS14360 1de4a4004227e20ab86b3fbaa1c7a0d2 117 SUPERFAMILY SSF50104 2 115 4.21E-48 T 21-04-2016 IPR008991 Translation protein SH3-like domain VFU_RS14360 1de4a4004227e20ab86b3fbaa1c7a0d2 117 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 31.204 T 21-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS14360 1de4a4004227e20ab86b3fbaa1c7a0d2 117 PANTHER PTHR15680 1 117 1.1E-58 T 21-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS14360 1de4a4004227e20ab86b3fbaa1c7a0d2 117 PRINTS PR00061 Ribosomal protein L19 signature 34 63 8.7E-42 T 21-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS14360 1de4a4004227e20ab86b3fbaa1c7a0d2 117 PRINTS PR00061 Ribosomal protein L19 signature 88 113 8.7E-42 T 21-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS14360 1de4a4004227e20ab86b3fbaa1c7a0d2 117 PRINTS PR00061 Ribosomal protein L19 signature 4 33 8.7E-42 T 21-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS14360 1de4a4004227e20ab86b3fbaa1c7a0d2 117 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 21-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS09290 84c765ae8894dce4ec889be76a197f8c 57 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 50 2.1E-17 T 21-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type VFU_RS09290 84c765ae8894dce4ec889be76a197f8c 57 PANTHER PTHR41532 2 57 1.6E-21 T 21-04-2016 VFU_RS09290 84c765ae8894dce4ec889be76a197f8c 57 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 1.7E-21 T 21-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type VFU_RS11520 ea936cd64a63eadba7b783ba4a7401fb 513 Pfam PF11840 Protein of unknown function (DUF3360) 9 513 3.6E-266 T 21-04-2016 IPR021794 Protein of unknown function DUF3360 VFU_RS20665 c2bfa51b0c1df0a773e1a47e45f078ca 294 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 3 262 5.4E-49 T 21-04-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VFU_RS20665 c2bfa51b0c1df0a773e1a47e45f078ca 294 PANTHER PTHR22600:SF12 65 267 1.4E-99 T 21-04-2016 VFU_RS20665 c2bfa51b0c1df0a773e1a47e45f078ca 294 PRINTS PR00738 Glycosyl hydrolase family 20 signature 24 37 2.0E-8 T 21-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VFU_RS20665 c2bfa51b0c1df0a773e1a47e45f078ca 294 PRINTS PR00738 Glycosyl hydrolase family 20 signature 244 261 2.0E-8 T 21-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VFU_RS20665 c2bfa51b0c1df0a773e1a47e45f078ca 294 PRINTS PR00738 Glycosyl hydrolase family 20 signature 226 242 2.0E-8 T 21-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VFU_RS20665 c2bfa51b0c1df0a773e1a47e45f078ca 294 Gene3D G3DSA:3.20.20.80 4 272 5.3E-68 T 21-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VFU_RS20665 c2bfa51b0c1df0a773e1a47e45f078ca 294 PANTHER PTHR22600 1 36 1.4E-99 T 21-04-2016 VFU_RS20665 c2bfa51b0c1df0a773e1a47e45f078ca 294 PANTHER PTHR22600 65 267 1.4E-99 T 21-04-2016 VFU_RS20665 c2bfa51b0c1df0a773e1a47e45f078ca 294 PANTHER PTHR22600:SF12 1 36 1.4E-99 T 21-04-2016 VFU_RS20665 c2bfa51b0c1df0a773e1a47e45f078ca 294 SUPERFAMILY SSF51445 2 270 1.81E-69 T 21-04-2016 IPR017853 Glycoside hydrolase superfamily VFU_RS02860 cfc049805d671a59de7c63d213624bb2 320 Gene3D G3DSA:3.40.50.450 2 215 1.7E-76 T 21-04-2016 VFU_RS02860 cfc049805d671a59de7c63d213624bb2 320 Pfam PF00365 Phosphofructokinase 4 276 1.1E-110 T 21-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS02860 cfc049805d671a59de7c63d213624bb2 320 SUPERFAMILY SSF53784 3 312 6.02E-116 T 21-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS02860 cfc049805d671a59de7c63d213624bb2 320 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 21-04-2016 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS02860 cfc049805d671a59de7c63d213624bb2 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 4.0E-84 T 21-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS02860 cfc049805d671a59de7c63d213624bb2 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 4.0E-84 T 21-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS02860 cfc049805d671a59de7c63d213624bb2 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 4.0E-84 T 21-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS02860 cfc049805d671a59de7c63d213624bb2 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 4.0E-84 T 21-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS02860 cfc049805d671a59de7c63d213624bb2 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 4.0E-84 T 21-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS02860 cfc049805d671a59de7c63d213624bb2 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 4.0E-84 T 21-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS02860 cfc049805d671a59de7c63d213624bb2 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 4.0E-84 T 21-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS02860 cfc049805d671a59de7c63d213624bb2 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 4.0E-84 T 21-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS02860 cfc049805d671a59de7c63d213624bb2 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 4.0E-84 T 21-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VFU_RS02860 cfc049805d671a59de7c63d213624bb2 320 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 301 7.4E-131 T 21-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 VFU_RS02860 cfc049805d671a59de7c63d213624bb2 320 PIRSF PIRSF000532 1 320 9.5E-130 T 21-04-2016 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 VFU_RS02860 cfc049805d671a59de7c63d213624bb2 320 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 320 47.634 T 21-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 VFU_RS02860 cfc049805d671a59de7c63d213624bb2 320 PANTHER PTHR13697 2 310 9.9E-139 T 21-04-2016 VFU_RS02685 803404506b22843c45d5303b31e52fdf 173 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 6 165 6.6E-68 T 21-04-2016 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530|UniPathway: UPA00792 VFU_RS02685 803404506b22843c45d5303b31e52fdf 173 PANTHER PTHR11603 6 169 1.0E-85 T 21-04-2016 VFU_RS02685 803404506b22843c45d5303b31e52fdf 173 Gene3D G3DSA:3.40.50.300 3 169 2.2E-73 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS02685 803404506b22843c45d5303b31e52fdf 173 SUPERFAMILY SSF52540 3 167 1.07E-30 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS02685 803404506b22843c45d5303b31e52fdf 173 Pfam PF01202 Shikimate kinase 12 166 4.8E-14 T 21-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 VFU_RS14810 d02a7604ccaafe863314ab201fefa11f 166 Hamap MF_00746 Protein SprT [sprT]. 8 161 39.458 T 21-04-2016 IPR023483 Uncharacterised protein family SprT VFU_RS14810 d02a7604ccaafe863314ab201fefa11f 166 Pfam PF10263 SprT-like family 17 160 5.0E-27 T 21-04-2016 IPR006640 SprT-like VFU_RS14810 d02a7604ccaafe863314ab201fefa11f 166 PANTHER PTHR38773 1 166 2.4E-76 T 21-04-2016 VFU_RS14810 d02a7604ccaafe863314ab201fefa11f 166 SMART SM00731 12 161 1.2E-51 T 21-04-2016 IPR006640 SprT-like VFU_RS11035 fd87fb1d14fc28b71ce81a0acfe5ea04 140 Pfam PF00460 Flagella basal body rod protein 9 32 7.3E-8 T 21-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VFU_RS11035 fd87fb1d14fc28b71ce81a0acfe5ea04 140 PANTHER PTHR30435 1 139 2.6E-49 T 21-04-2016 VFU_RS11035 fd87fb1d14fc28b71ce81a0acfe5ea04 140 PANTHER PTHR30435:SF2 1 139 2.6E-49 T 21-04-2016 VFU_RS11035 fd87fb1d14fc28b71ce81a0acfe5ea04 140 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 8 138 9.1E-41 T 21-04-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 VFU_RS11035 fd87fb1d14fc28b71ce81a0acfe5ea04 140 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 93 136 2.4E-11 T 21-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VFU_RS11035 fd87fb1d14fc28b71ce81a0acfe5ea04 140 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 21-04-2016 IPR019776 Flagellar basal body rod protein, conserved site VFU_RS02305 2bca3c018f4cba545b2aa89172f868d8 408 SUPERFAMILY SSF103473 13 402 2.09E-31 T 21-04-2016 IPR020846 Major facilitator superfamily domain VFU_RS02305 2bca3c018f4cba545b2aa89172f868d8 408 PANTHER PTHR23547:SF1 1 401 3.1E-180 T 21-04-2016 VFU_RS02305 2bca3c018f4cba545b2aa89172f868d8 408 Pfam PF07690 Major Facilitator Superfamily 21 278 4.0E-14 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VFU_RS02305 2bca3c018f4cba545b2aa89172f868d8 408 PANTHER PTHR23547 1 401 3.1E-180 T 21-04-2016 VFU_RS02305 2bca3c018f4cba545b2aa89172f868d8 408 Gene3D G3DSA:1.20.1250.20 14 197 4.3E-14 T 21-04-2016 VFU_RS02305 2bca3c018f4cba545b2aa89172f868d8 408 Gene3D G3DSA:1.20.1250.20 220 404 5.3E-9 T 21-04-2016 VFU_RS22770 353ef63ff15d07649e52d5ab982cb588 173 SUPERFAMILY SSF47413 2 67 4.16E-17 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VFU_RS22770 353ef63ff15d07649e52d5ab982cb588 173 Pfam PF01381 Helix-turn-helix 9 63 1.5E-16 T 21-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VFU_RS22770 353ef63ff15d07649e52d5ab982cb588 173 SMART SM00530 8 63 7.9E-16 T 21-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VFU_RS22770 353ef63ff15d07649e52d5ab982cb588 173 Gene3D G3DSA:1.10.260.40 2 67 4.6E-20 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VFU_RS09185 2d3c3784cc46beb3ab3bd9854b23b1f0 553 PANTHER PTHR24960 86 244 5.3E-100 T 21-04-2016 VFU_RS09185 2d3c3784cc46beb3ab3bd9854b23b1f0 553 PANTHER PTHR24960 412 545 5.3E-100 T 21-04-2016 VFU_RS09185 2d3c3784cc46beb3ab3bd9854b23b1f0 553 Pfam PF00037 4Fe-4S binding domain 418 435 7.6E-5 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VFU_RS09185 2d3c3784cc46beb3ab3bd9854b23b1f0 553 Pfam PF00037 4Fe-4S binding domain 446 467 5.5E-7 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VFU_RS09185 2d3c3784cc46beb3ab3bd9854b23b1f0 553 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 451 462 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VFU_RS09185 2d3c3784cc46beb3ab3bd9854b23b1f0 553 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 420 431 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VFU_RS09185 2d3c3784cc46beb3ab3bd9854b23b1f0 553 PANTHER PTHR24960:SF43 86 244 5.3E-100 T 21-04-2016 VFU_RS09185 2d3c3784cc46beb3ab3bd9854b23b1f0 553 PANTHER PTHR24960:SF43 412 545 5.3E-100 T 21-04-2016 VFU_RS09185 2d3c3784cc46beb3ab3bd9854b23b1f0 553 Pfam PF12838 4Fe-4S dicluster domain 185 231 3.0E-8 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VFU_RS09185 2d3c3784cc46beb3ab3bd9854b23b1f0 553 Gene3D G3DSA:3.30.70.20 172 249 4.5E-13 T 21-04-2016 VFU_RS09185 2d3c3784cc46beb3ab3bd9854b23b1f0 553 SUPERFAMILY SSF54862 412 511 1.62E-36 T 21-04-2016 VFU_RS09185 2d3c3784cc46beb3ab3bd9854b23b1f0 553 SUPERFAMILY SSF54862 159 238 1.62E-36 T 21-04-2016 VFU_RS09185 2d3c3784cc46beb3ab3bd9854b23b1f0 553 Gene3D G3DSA:3.30.70.20 417 455 9.1E-12 T 21-04-2016 VFU_RS09185 2d3c3784cc46beb3ab3bd9854b23b1f0 553 Gene3D G3DSA:3.30.70.20 456 497 2.1E-7 T 21-04-2016 VFU_RS13710 38d2bc4c14c2a7f74a132bc944f1af65 271 Gene3D G3DSA:2.40.230.20 23 271 1.1E-96 T 21-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 VFU_RS13710 38d2bc4c14c2a7f74a132bc944f1af65 271 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 111 131 2.2E-5 T 21-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 VFU_RS13710 38d2bc4c14c2a7f74a132bc944f1af65 271 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 247 270 2.2E-5 T 21-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 VFU_RS13710 38d2bc4c14c2a7f74a132bc944f1af65 271 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 53 77 2.2E-5 T 21-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 VFU_RS13710 38d2bc4c14c2a7f74a132bc944f1af65 271 SUPERFAMILY SSF111364 30 271 2.35E-79 T 21-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 VFU_RS13710 38d2bc4c14c2a7f74a132bc944f1af65 271 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 30 271 9.4E-98 T 21-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 VFU_RS08230 b3f59aba62ab539ad228af46a8146445 215 PANTHER PTHR24220 4 206 2.4E-102 T 21-04-2016 VFU_RS08230 b3f59aba62ab539ad228af46a8146445 215 Pfam PF00005 ABC transporter 20 164 3.3E-31 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS08230 b3f59aba62ab539ad228af46a8146445 215 PANTHER PTHR24220:SF485 4 206 2.4E-102 T 21-04-2016 VFU_RS08230 b3f59aba62ab539ad228af46a8146445 215 SUPERFAMILY SSF52540 8 201 4.06E-51 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS08230 b3f59aba62ab539ad228af46a8146445 215 SMART SM00382 28 212 2.4E-11 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS08230 b3f59aba62ab539ad228af46a8146445 215 Gene3D G3DSA:3.40.50.300 5 199 8.8E-51 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS08230 b3f59aba62ab539ad228af46a8146445 215 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS12885 40fcb86c6d1f293233c3a71d31033fc0 92 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 6 92 26.09 T 21-04-2016 IPR007454 Uncharacterised protein family UPF0250 VFU_RS12885 40fcb86c6d1f293233c3a71d31033fc0 92 PANTHER PTHR38036:SF1 4 92 1.0E-42 T 21-04-2016 VFU_RS12885 40fcb86c6d1f293233c3a71d31033fc0 92 PANTHER PTHR38036 4 92 1.0E-42 T 21-04-2016 VFU_RS12885 40fcb86c6d1f293233c3a71d31033fc0 92 SUPERFAMILY SSF117991 7 92 7.98E-31 T 21-04-2016 IPR027471 YbeD-like domain VFU_RS12885 40fcb86c6d1f293233c3a71d31033fc0 92 Gene3D G3DSA:3.30.70.1460 8 92 3.6E-35 T 21-04-2016 IPR027471 YbeD-like domain VFU_RS12885 40fcb86c6d1f293233c3a71d31033fc0 92 Pfam PF04359 Protein of unknown function (DUF493) 12 92 1.5E-28 T 21-04-2016 IPR007454 Uncharacterised protein family UPF0250 VFU_RS13160 109ab248196a84c32f2c51fa8e596727 67 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 7 65 2.0E-18 T 21-04-2016 IPR009624 Uncharacterised protein family UPF0253 VFU_RS13160 109ab248196a84c32f2c51fa8e596727 67 Pfam PF06786 Uncharacterised protein family (UPF0253) 1 67 1.6E-34 T 21-04-2016 IPR009624 Uncharacterised protein family UPF0253 VFU_RS13160 109ab248196a84c32f2c51fa8e596727 67 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 1 67 27.336 T 21-04-2016 IPR009624 Uncharacterised protein family UPF0253 VFU_RS00935 4b32a2584ee14cd0ac141e3996b2973c 126 PIRSF PIRSF028299 3 126 1.3E-28 T 21-04-2016 IPR016879 Uncharacterised conserved protein UCP028299 VFU_RS00935 4b32a2584ee14cd0ac141e3996b2973c 126 Pfam PF11777 Protein of unknown function (DUF3316) 5 118 2.3E-19 T 21-04-2016 IPR016879 Uncharacterised conserved protein UCP028299 VFU_RS05375 b5d9a524224db000e698c9b900045597 155 PANTHER PTHR10642 1 152 3.3E-61 T 21-04-2016 VFU_RS05375 b5d9a524224db000e698c9b900045597 155 Hamap MF_00042 Ribonuclease H [rnhA]. 2 149 36.653 T 21-04-2016 IPR022892 Ribonuclease H GO:0004523 VFU_RS05375 b5d9a524224db000e698c9b900045597 155 Gene3D G3DSA:3.30.420.10 2 148 1.4E-60 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VFU_RS05375 b5d9a524224db000e698c9b900045597 155 Pfam PF00075 RNase H 3 141 6.4E-54 T 21-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 VFU_RS05375 b5d9a524224db000e698c9b900045597 155 SUPERFAMILY SSF53098 3 143 2.28E-57 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VFU_RS12325 b787d5b85cb6353347f22f93488ba06b 145 PANTHER PTHR37421:SF1 1 145 3.0E-73 T 21-04-2016 VFU_RS12325 b787d5b85cb6353347f22f93488ba06b 145 Pfam PF03692 Putative zinc- or iron-chelating domain 23 91 2.6E-8 T 21-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein VFU_RS12325 b787d5b85cb6353347f22f93488ba06b 145 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 1 144 41.732 T 21-04-2016 IPR008228 Uncharacterised conserved protein UCP006173 VFU_RS12325 b787d5b85cb6353347f22f93488ba06b 145 PIRSF PIRSF006173 1 144 1.3E-64 T 21-04-2016 IPR008228 Uncharacterised conserved protein UCP006173 VFU_RS12325 b787d5b85cb6353347f22f93488ba06b 145 PANTHER PTHR37421 1 145 3.0E-73 T 21-04-2016 VFU_RS07440 574eea50f9c81d472c307c44356b030c 462 Gene3D G3DSA:2.40.170.10 56 462 3.0E-126 T 21-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 VFU_RS07440 574eea50f9c81d472c307c44356b030c 462 Pfam PF11471 Maltoporin periplasmic N-terminal extension 1 55 1.5E-17 T 21-04-2016 IPR021570 LamB-type porin N-terminal domain VFU_RS07440 574eea50f9c81d472c307c44356b030c 462 PANTHER PTHR38762 33 462 1.5E-21 T 21-04-2016 VFU_RS07440 574eea50f9c81d472c307c44356b030c 462 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 63 458 2.0E-117 T 21-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 VFU_RS07440 574eea50f9c81d472c307c44356b030c 462 SUPERFAMILY SSF56935 57 462 1.13E-107 T 21-04-2016 VFU_RS07440 574eea50f9c81d472c307c44356b030c 462 Pfam PF02264 LamB porin 59 462 1.4E-99 T 21-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 VFU_RS05395 deef3a4ada8101ddc6092a7cd922f72e 191 Pfam PF13580 SIS domain 25 146 1.5E-30 T 21-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 VFU_RS05395 deef3a4ada8101ddc6092a7cd922f72e 191 PANTHER PTHR30390:SF6 2 190 8.6E-93 T 21-04-2016 VFU_RS05395 deef3a4ada8101ddc6092a7cd922f72e 191 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 38.03 T 21-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 VFU_RS05395 deef3a4ada8101ddc6092a7cd922f72e 191 SUPERFAMILY SSF53697 1 188 7.08E-52 T 21-04-2016 VFU_RS05395 deef3a4ada8101ddc6092a7cd922f72e 191 PANTHER PTHR30390 2 190 8.6E-93 T 21-04-2016 VFU_RS05395 deef3a4ada8101ddc6092a7cd922f72e 191 Gene3D G3DSA:3.40.50.10490 1 190 2.3E-63 T 21-04-2016 VFU_RS05395 deef3a4ada8101ddc6092a7cd922f72e 191 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 2.2E-82 T 21-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 VFU_RS09390 a1f16ac6d44f9a08793b983eaac00e52 105 Pfam PF12321 Protein of unknown function (DUF3634) 2 103 3.1E-41 T 21-04-2016 IPR022090 Protein of unknown function DUF3634 VFU_RS12835 b3584d27617f45a529ec4f716c3c3a7a 156 Pfam PF07295 Zinc-ribbon containing domain 14 152 2.2E-48 T 21-04-2016 IPR009912 Zinc-ribbon containing domain VFU_RS14420 aff54447339352a57a08411d0e7a080f 316 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 92 1.7E-8 T 21-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VFU_RS14420 aff54447339352a57a08411d0e7a080f 316 SMART SM00829 12 312 2.6E-14 T 21-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VFU_RS14420 aff54447339352a57a08411d0e7a080f 316 SUPERFAMILY SSF50129 4 154 4.11E-37 T 21-04-2016 IPR011032 GroES-like VFU_RS14420 aff54447339352a57a08411d0e7a080f 316 PANTHER PTHR11695 17 314 2.3E-83 T 21-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 VFU_RS14420 aff54447339352a57a08411d0e7a080f 316 SUPERFAMILY SSF51735 122 246 3.03E-30 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS14420 aff54447339352a57a08411d0e7a080f 316 Pfam PF13602 Zinc-binding dehydrogenase 191 312 2.2E-21 T 21-04-2016 VFU_RS14420 aff54447339352a57a08411d0e7a080f 316 Gene3D G3DSA:3.90.180.10 3 153 3.6E-43 T 21-04-2016 IPR011032 GroES-like VFU_RS14420 aff54447339352a57a08411d0e7a080f 316 Gene3D G3DSA:3.40.50.720 154 239 6.5E-20 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS14995 35116b1d3fa267ba57d9e11b162bc016 126 SUPERFAMILY SSF110069 6 126 3.27E-47 T 21-04-2016 IPR007474 ApaG domain VFU_RS14995 35116b1d3fa267ba57d9e11b162bc016 126 Pfam PF04379 Protein of unknown function (DUF525) 18 103 2.5E-33 T 21-04-2016 IPR007474 ApaG domain VFU_RS14995 35116b1d3fa267ba57d9e11b162bc016 126 PANTHER PTHR14289 6 122 3.3E-52 T 21-04-2016 VFU_RS14995 35116b1d3fa267ba57d9e11b162bc016 126 Gene3D G3DSA:2.60.40.1470 7 125 2.5E-46 T 21-04-2016 IPR007474 ApaG domain VFU_RS14995 35116b1d3fa267ba57d9e11b162bc016 126 Hamap MF_00791 Protein ApaG [apaG]. 1 126 31.533 T 21-04-2016 IPR023065 Uncharacterised protein family ApaG VFU_RS00810 c0aedfb42401e0cad58f7274f3ed977d 638 Pfam PF00884 Sulfatase 254 544 8.8E-22 T 21-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 VFU_RS00810 c0aedfb42401e0cad58f7274f3ed977d 638 Gene3D G3DSA:3.40.720.10 254 546 1.2E-17 T 21-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VFU_RS00810 c0aedfb42401e0cad58f7274f3ed977d 638 SUPERFAMILY SSF53649 253 561 1.42E-22 T 21-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VFU_RS00810 c0aedfb42401e0cad58f7274f3ed977d 638 PANTHER PTHR10342 248 517 1.2E-18 T 21-04-2016 VFU_RS00810 c0aedfb42401e0cad58f7274f3ed977d 638 PANTHER PTHR10342:SF236 248 517 1.2E-18 T 21-04-2016 VFU_RS04950 ab56e191a7e81b437eeab0f4d8d050ec 328 PANTHER PTHR10209 29 326 6.5E-81 T 21-04-2016 VFU_RS04950 ab56e191a7e81b437eeab0f4d8d050ec 328 Gene3D G3DSA:2.60.120.330 28 326 3.3E-77 T 21-04-2016 IPR027443 Isopenicillin N synthase-like VFU_RS04950 ab56e191a7e81b437eeab0f4d8d050ec 328 SUPERFAMILY SSF51197 26 327 3.57E-74 T 21-04-2016 VFU_RS04950 ab56e191a7e81b437eeab0f4d8d050ec 328 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 29 125 1.4E-21 T 21-04-2016 IPR026992 Non-haem dioxygenase N-terminal domain VFU_RS04950 ab56e191a7e81b437eeab0f4d8d050ec 328 PANTHER PTHR10209:SF188 29 326 6.5E-81 T 21-04-2016 VFU_RS04950 ab56e191a7e81b437eeab0f4d8d050ec 328 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 189 296 2.8E-18 T 21-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 VFU_RS08680 32da77facae6642cbc1bacb4cbcaaf38 456 PANTHER PTHR30203 27 450 6.2E-123 T 21-04-2016 VFU_RS08680 32da77facae6642cbc1bacb4cbcaaf38 456 Gene3D G3DSA:2.20.200.10 303 335 6.0E-11 T 21-04-2016 VFU_RS08680 32da77facae6642cbc1bacb4cbcaaf38 456 Gene3D G3DSA:2.20.200.10 104 130 6.0E-11 T 21-04-2016 VFU_RS08680 32da77facae6642cbc1bacb4cbcaaf38 456 Gene3D G3DSA:1.20.1600.10 131 302 3.8E-79 T 21-04-2016 VFU_RS08680 32da77facae6642cbc1bacb4cbcaaf38 456 Gene3D G3DSA:1.20.1600.10 338 450 3.8E-79 T 21-04-2016 VFU_RS08680 32da77facae6642cbc1bacb4cbcaaf38 456 Gene3D G3DSA:1.20.1600.10 50 86 3.8E-79 T 21-04-2016 VFU_RS08680 32da77facae6642cbc1bacb4cbcaaf38 456 Pfam PF02321 Outer membrane efflux protein 60 240 4.0E-27 T 21-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VFU_RS08680 32da77facae6642cbc1bacb4cbcaaf38 456 Pfam PF02321 Outer membrane efflux protein 271 449 5.3E-18 T 21-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VFU_RS08680 32da77facae6642cbc1bacb4cbcaaf38 456 PANTHER PTHR30203:SF13 27 450 6.2E-123 T 21-04-2016 VFU_RS08680 32da77facae6642cbc1bacb4cbcaaf38 456 SUPERFAMILY SSF56954 2 450 3.53E-88 T 21-04-2016 VFU_RS08680 32da77facae6642cbc1bacb4cbcaaf38 456 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 12 450 4.1E-82 T 21-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 VFU_RS22400 91d95b379fdcdf237af6410c61ab1e88 172 PANTHER PTHR30290 2 172 9.8E-32 T 21-04-2016 VFU_RS22400 91d95b379fdcdf237af6410c61ab1e88 172 Gene3D G3DSA:3.40.190.10 2 48 3.6E-9 T 21-04-2016 VFU_RS22400 91d95b379fdcdf237af6410c61ab1e88 172 SUPERFAMILY SSF53850 2 172 9.23E-28 T 21-04-2016 VFU_RS22400 91d95b379fdcdf237af6410c61ab1e88 172 Gene3D G3DSA:3.10.105.10 49 172 8.6E-24 T 21-04-2016 VFU_RS22400 91d95b379fdcdf237af6410c61ab1e88 172 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 2 172 1.5E-25 T 21-04-2016 IPR000914 Solute-binding protein family 5 domain VFU_RS22400 91d95b379fdcdf237af6410c61ab1e88 172 PANTHER PTHR30290:SF9 2 172 9.8E-32 T 21-04-2016 VFU_RS00525 d19001d6b4520df316f753b68b175c67 198 Pfam PF02169 LPP20 lipoprotein 43 154 3.5E-21 T 21-04-2016 IPR024952 Lipoprotein LPP20-like VFU_RS00525 d19001d6b4520df316f753b68b175c67 198 Gene3D G3DSA:3.90.1150.10 84 160 4.4E-4 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VFU_RS12140 c1c4647d45e28f382a4d59d7a3adb6a9 395 Pfam PF04865 Baseplate J-like protein 84 336 1.4E-32 T 21-04-2016 IPR006949 Baseplate protein J-like VFU_RS01765 d831ad5df42661ed2018efa7281e9fdb 129 Pfam PF03899 ATP synthase I chain 15 111 2.4E-20 T 21-04-2016 IPR005598 ATP synthase protein I VFU_RS11000 ed2d2bf22c327cb9887c2dd2faa7d478 128 Pfam PF10135 Rod binding protein 68 119 6.1E-15 T 21-04-2016 IPR019301 Flagellar protein FlgJ, N-terminal VFU_RS02455 e9a6e36be815c3a657b8260b3aa87f2b 267 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 74 82 - T 21-04-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VFU_RS02455 e9a6e36be815c3a657b8260b3aa87f2b 267 Hamap MF_00258 Glutamate racemase [murI]. 7 255 32.868 T 21-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VFU_RS02455 e9a6e36be815c3a657b8260b3aa87f2b 267 Pfam PF01177 Asp/Glu/Hydantoin racemase 12 215 1.1E-26 T 21-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VFU_RS02455 e9a6e36be815c3a657b8260b3aa87f2b 267 Gene3D G3DSA:3.40.50.1860 9 175 8.1E-45 T 21-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VFU_RS02455 e9a6e36be815c3a657b8260b3aa87f2b 267 PANTHER PTHR21198:SF2 1 264 6.9E-95 T 21-04-2016 VFU_RS02455 e9a6e36be815c3a657b8260b3aa87f2b 267 TIGRFAM TIGR00067 glut_race: glutamate racemase 10 228 1.2E-67 T 21-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VFU_RS02455 e9a6e36be815c3a657b8260b3aa87f2b 267 SUPERFAMILY SSF53681 9 108 3.66E-29 T 21-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VFU_RS02455 e9a6e36be815c3a657b8260b3aa87f2b 267 SUPERFAMILY SSF53681 112 257 3.27E-33 T 21-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VFU_RS02455 e9a6e36be815c3a657b8260b3aa87f2b 267 PANTHER PTHR21198 1 264 6.9E-95 T 21-04-2016 VFU_RS21650 4b5e1bbaf716f3defab3fb58a63114c3 154 PANTHER PTHR32294 1 153 2.5E-60 T 21-04-2016 VFU_RS21650 4b5e1bbaf716f3defab3fb58a63114c3 154 PANTHER PTHR32294:SF4 1 153 2.5E-60 T 21-04-2016 VFU_RS21650 4b5e1bbaf716f3defab3fb58a63114c3 154 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 2 153 6.2E-37 T 21-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS11080 07343309d600dbd738b3285824b26e90 349 Gene3D G3DSA:3.30.420.40 182 301 1.6E-24 T 21-04-2016 VFU_RS11080 07343309d600dbd738b3285824b26e90 349 SUPERFAMILY SSF53067 6 163 4.34E-48 T 21-04-2016 VFU_RS11080 07343309d600dbd738b3285824b26e90 349 Pfam PF06406 StbA protein 6 325 4.6E-118 T 21-04-2016 IPR009440 Plasmid segregation protein ParM/StbA VFU_RS11080 07343309d600dbd738b3285824b26e90 349 SUPERFAMILY SSF53067 170 329 7.13E-20 T 21-04-2016 VFU_RS11080 07343309d600dbd738b3285824b26e90 349 Gene3D G3DSA:3.30.420.40 6 181 6.9E-72 T 21-04-2016 VFU_RS00515 e037cf21d7a12e47f37c5154128d54e7 324 Pfam PF02169 LPP20 lipoprotein 26 125 4.7E-19 T 21-04-2016 IPR024952 Lipoprotein LPP20-like VFU_RS05800 a186130faa5ea040c6d0240480282e79 67 Pfam PF11446 Protein of unknown function (DUF2897) 6 52 3.7E-12 T 21-04-2016 IPR021550 Protein of unknown function DUF2897 VFU_RS11770 dbb70acd9535d9fb3e130f02729b6eab 619 SUPERFAMILY SSF109998 203 244 1.11E-39 T 21-04-2016 IPR027304 Trigger factor/SurA domain VFU_RS11770 dbb70acd9535d9fb3e130f02729b6eab 619 SUPERFAMILY SSF109998 39 169 1.11E-39 T 21-04-2016 IPR027304 Trigger factor/SurA domain VFU_RS11770 dbb70acd9535d9fb3e130f02729b6eab 619 Pfam PF13616 PPIC-type PPIASE domain 262 362 5.5E-25 T 21-04-2016 VFU_RS11770 dbb70acd9535d9fb3e130f02729b6eab 619 PANTHER PTHR10657 1 175 9.6E-187 T 21-04-2016 VFU_RS11770 dbb70acd9535d9fb3e130f02729b6eab 619 PANTHER PTHR10657 203 518 9.6E-187 T 21-04-2016 VFU_RS11770 dbb70acd9535d9fb3e130f02729b6eab 619 SUPERFAMILY SSF54534 225 361 2.75E-30 T 21-04-2016 VFU_RS11770 dbb70acd9535d9fb3e130f02729b6eab 619 Gene3D G3DSA:3.10.50.40 261 385 6.7E-40 T 21-04-2016 VFU_RS11770 dbb70acd9535d9fb3e130f02729b6eab 619 Pfam PF13624 SurA N-terminal domain 1 166 1.0E-51 T 21-04-2016 VFU_RS11770 dbb70acd9535d9fb3e130f02729b6eab 619 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 299 320 - T 21-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site VFU_RS11770 dbb70acd9535d9fb3e130f02729b6eab 619 PANTHER PTHR10657:SF13 1 175 9.6E-187 T 21-04-2016 VFU_RS11770 dbb70acd9535d9fb3e130f02729b6eab 619 PANTHER PTHR10657:SF13 203 518 9.6E-187 T 21-04-2016 VFU_RS12575 7c80f73b21cff978ad1b5bfe03f885e7 145 ProDom PD087558 YRN2_VIBPA ORF2 VV1184 VV13101 MOTY 3'REGION VC1009 VP2110 3 144 9.0E-65 T 21-04-2016 IPR020206 Uncharacterised protein family, VP2110 VFU_RS12575 7c80f73b21cff978ad1b5bfe03f885e7 145 Pfam PF10952 Protein of unknown function (DUF2753) 6 145 3.4E-76 T 21-04-2016 IPR020206 Uncharacterised protein family, VP2110 VFU_RS05330 20776a92710605fb30c4e427b7c11a4e 319 SUPERFAMILY SSF52096 5 318 6.89E-104 T 21-04-2016 IPR029045 ClpP/crotonase-like domain VFU_RS05330 20776a92710605fb30c4e427b7c11a4e 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 6 151 2.8E-64 T 21-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VFU_RS05330 20776a92710605fb30c4e427b7c11a4e 319 PANTHER PTHR22855:SF42 1 318 4.3E-128 T 21-04-2016 VFU_RS05330 20776a92710605fb30c4e427b7c11a4e 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 2.3E-48 T 21-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VFU_RS05330 20776a92710605fb30c4e427b7c11a4e 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 2.3E-48 T 21-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VFU_RS05330 20776a92710605fb30c4e427b7c11a4e 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 2.3E-48 T 21-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VFU_RS05330 20776a92710605fb30c4e427b7c11a4e 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 2.3E-48 T 21-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VFU_RS05330 20776a92710605fb30c4e427b7c11a4e 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 2.3E-48 T 21-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VFU_RS05330 20776a92710605fb30c4e427b7c11a4e 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 2.3E-48 T 21-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VFU_RS05330 20776a92710605fb30c4e427b7c11a4e 319 PANTHER PTHR22855 1 318 4.3E-128 T 21-04-2016 VFU_RS05330 20776a92710605fb30c4e427b7c11a4e 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 2.1E-163 T 21-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VFU_RS05330 20776a92710605fb30c4e427b7c11a4e 319 Gene3D G3DSA:3.90.226.10 59 274 1.2E-49 T 21-04-2016 IPR029045 ClpP/crotonase-like domain VFU_RS05330 20776a92710605fb30c4e427b7c11a4e 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 50.655 T 21-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VFU_RS16870 2bb83b7e735b22ac0fcd5a725cf82280 157 Gene3D G3DSA:3.90.45.10 85 157 1.1E-24 T 21-04-2016 IPR023635 Peptide deformylase VFU_RS16870 2bb83b7e735b22ac0fcd5a725cf82280 157 PANTHER PTHR10458:SF10 60 156 8.4E-43 T 21-04-2016 VFU_RS16870 2bb83b7e735b22ac0fcd5a725cf82280 157 SUPERFAMILY SSF56420 75 157 4.45E-25 T 21-04-2016 IPR023635 Peptide deformylase VFU_RS16870 2bb83b7e735b22ac0fcd5a725cf82280 157 Pfam PF01327 Polypeptide deformylase 84 156 2.3E-19 T 21-04-2016 IPR023635 Peptide deformylase VFU_RS16870 2bb83b7e735b22ac0fcd5a725cf82280 157 PANTHER PTHR10458 60 156 8.4E-43 T 21-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 VFU_RS13855 ab83b52507bde38b5a9242f22c492fa8 318 PANTHER PTHR35007:SF2 9 313 2.1E-57 T 21-04-2016 VFU_RS13855 ab83b52507bde38b5a9242f22c492fa8 318 PANTHER PTHR35007 9 313 2.1E-57 T 21-04-2016 VFU_RS13855 ab83b52507bde38b5a9242f22c492fa8 318 Pfam PF00482 Type II secretion system (T2SS), protein F 177 305 6.7E-23 T 21-04-2016 IPR018076 Type II secretion system F domain VFU_RS14540 4bb94b9dbbaac78e0da2524e38c66947 267 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 264 17.288 T 21-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 VFU_RS14540 4bb94b9dbbaac78e0da2524e38c66947 267 PANTHER PTHR30622 1 265 4.5E-127 T 21-04-2016 VFU_RS14540 4bb94b9dbbaac78e0da2524e38c66947 267 Pfam PF02673 Bacitracin resistance protein BacA 7 258 9.8E-73 T 21-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 VFU_RS14540 4bb94b9dbbaac78e0da2524e38c66947 267 PANTHER PTHR30622:SF4 1 265 4.5E-127 T 21-04-2016 VFU_RS14540 4bb94b9dbbaac78e0da2524e38c66947 267 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 7 257 2.6E-72 T 21-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 VFU_RS04665 42d160ce08a4d50e6e90a6cbc3a30698 337 PANTHER PTHR30217:SF3 246 336 4.7E-214 T 21-04-2016 VFU_RS04665 42d160ce08a4d50e6e90a6cbc3a30698 337 PANTHER PTHR30217:SF3 1 220 4.7E-214 T 21-04-2016 VFU_RS04665 42d160ce08a4d50e6e90a6cbc3a30698 337 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 21-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VFU_RS04665 42d160ce08a4d50e6e90a6cbc3a30698 337 PANTHER PTHR30217 246 336 4.7E-214 T 21-04-2016 VFU_RS04665 42d160ce08a4d50e6e90a6cbc3a30698 337 PANTHER PTHR30217 1 220 4.7E-214 T 21-04-2016 VFU_RS04665 42d160ce08a4d50e6e90a6cbc3a30698 337 Pfam PF01136 Peptidase family U32 75 336 9.0E-71 T 21-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VFU_RS14505 efb41fb67ea60f41af27fd1a1605ae51 311 SMART SM00257 48 92 2.5E-11 T 21-04-2016 IPR018392 LysM domain VFU_RS14505 efb41fb67ea60f41af27fd1a1605ae51 311 PANTHER PTHR21666:SF222 193 311 8.2E-54 T 21-04-2016 VFU_RS14505 efb41fb67ea60f41af27fd1a1605ae51 311 PANTHER PTHR21666 193 311 8.2E-54 T 21-04-2016 VFU_RS14505 efb41fb67ea60f41af27fd1a1605ae51 311 SUPERFAMILY SSF51261 48 310 2.3E-50 T 21-04-2016 IPR011055 Duplicated hybrid motif VFU_RS14505 efb41fb67ea60f41af27fd1a1605ae51 311 Pfam PF01551 Peptidase family M23 212 306 1.9E-31 T 21-04-2016 IPR016047 Peptidase M23 VFU_RS14505 efb41fb67ea60f41af27fd1a1605ae51 311 Gene3D G3DSA:3.10.350.10 47 92 3.7E-14 T 21-04-2016 IPR018392 LysM domain VFU_RS14505 efb41fb67ea60f41af27fd1a1605ae51 311 Pfam PF01476 LysM domain 49 91 6.3E-10 T 21-04-2016 IPR018392 LysM domain VFU_RS14505 efb41fb67ea60f41af27fd1a1605ae51 311 Gene3D G3DSA:2.70.70.10 175 310 1.3E-40 T 21-04-2016 VFU_RS12010 4308b95616196bcda7a3df3b457d3bbc 185 PANTHER PTHR37530 1 183 1.1E-45 T 21-04-2016 VFU_RS12010 4308b95616196bcda7a3df3b457d3bbc 185 PIRSF PIRSF004982 3 185 2.0E-57 T 21-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 VFU_RS12010 4308b95616196bcda7a3df3b457d3bbc 185 Pfam PF03843 Outer membrane lipoprotein Slp family 18 162 1.3E-42 T 21-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 VFU_RS12010 4308b95616196bcda7a3df3b457d3bbc 185 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 9 157 6.1E-31 T 21-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 VFU_RS02255 b0c0ac5723d5bdb34271850651cb6bb2 432 SMART SM00897 31 219 6.0E-27 T 21-04-2016 IPR013702 FIST domain, N-terminal VFU_RS02255 b0c0ac5723d5bdb34271850651cb6bb2 432 Pfam PF08495 FIST N domain 33 218 4.4E-29 T 21-04-2016 IPR013702 FIST domain, N-terminal VFU_RS02255 b0c0ac5723d5bdb34271850651cb6bb2 432 Pfam PF10442 FIST C domain 222 342 1.9E-8 T 21-04-2016 IPR019494 FIST, C-domain VFU_RS02255 b0c0ac5723d5bdb34271850651cb6bb2 432 SMART SM01204 220 345 2.7E-6 T 21-04-2016 IPR019494 FIST, C-domain VFU_RS08570 8c906ec49a04be993409efb1a182118c 218 PANTHER PTHR11935:SF115 1 215 8.0E-123 T 21-04-2016 VFU_RS08570 8c906ec49a04be993409efb1a182118c 218 Pfam PF00753 Metallo-beta-lactamase superfamily 11 195 1.4E-27 T 21-04-2016 IPR001279 Metallo-beta-lactamase VFU_RS08570 8c906ec49a04be993409efb1a182118c 218 PANTHER PTHR11935 1 215 8.0E-123 T 21-04-2016 VFU_RS08570 8c906ec49a04be993409efb1a182118c 218 Gene3D G3DSA:3.60.15.10 3 213 2.9E-56 T 21-04-2016 IPR001279 Metallo-beta-lactamase VFU_RS08570 8c906ec49a04be993409efb1a182118c 218 SUPERFAMILY SSF56281 4 211 3.52E-53 T 21-04-2016 IPR001279 Metallo-beta-lactamase VFU_RS08570 8c906ec49a04be993409efb1a182118c 218 SMART SM00849 14 195 5.2E-35 T 21-04-2016 IPR001279 Metallo-beta-lactamase VFU_RS16235 537b57ca74908dd308fe4585dade1e01 222 Gene3D G3DSA:3.40.50.2000 53 198 8.0E-27 T 21-04-2016 VFU_RS16235 537b57ca74908dd308fe4585dade1e01 222 PANTHER PTHR12526 1 222 9.5E-43 T 21-04-2016 VFU_RS16235 537b57ca74908dd308fe4585dade1e01 222 SUPERFAMILY SSF53756 1 222 5.23E-51 T 21-04-2016 VFU_RS16235 537b57ca74908dd308fe4585dade1e01 222 Pfam PF00534 Glycosyl transferases group 1 48 198 2.7E-29 T 21-04-2016 IPR001296 Glycosyl transferase, family 1 VFU_RS08740 5ea5a9aafdf88dedb720caf938e68f52 340 PANTHER PTHR39342:SF1 1 334 1.4E-77 T 21-04-2016 VFU_RS08740 5ea5a9aafdf88dedb720caf938e68f52 340 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 50 334 5.0E-77 T 21-04-2016 IPR006507 Uncharacterised protein family UPF0283 VFU_RS08740 5ea5a9aafdf88dedb720caf938e68f52 340 PANTHER PTHR39342 1 334 1.4E-77 T 21-04-2016 VFU_RS08740 5ea5a9aafdf88dedb720caf938e68f52 340 Pfam PF05128 Domain of unknown function (DUF697) 176 334 2.8E-51 T 21-04-2016 IPR021147 Protein of unknown function DUF697 VFU_RS02280 5f2bb0ccb09c3afb8c99d40c46cc5cb0 205 PANTHER PTHR30086:SF14 1 205 3.1E-98 T 21-04-2016 VFU_RS02280 5f2bb0ccb09c3afb8c99d40c46cc5cb0 205 PANTHER PTHR30086 1 205 3.1E-98 T 21-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VFU_RS02280 5f2bb0ccb09c3afb8c99d40c46cc5cb0 205 PIRSF PIRSF006324 1 205 1.2E-55 T 21-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VFU_RS02280 5f2bb0ccb09c3afb8c99d40c46cc5cb0 205 Pfam PF01810 LysE type translocator 15 202 3.2E-36 T 21-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VFU_RS11420 0966038e6d90980abeb1ca483606f71c 528 PANTHER PTHR30365 1 310 7.3E-276 T 21-04-2016 VFU_RS11420 0966038e6d90980abeb1ca483606f71c 528 PANTHER PTHR30365 376 520 7.3E-276 T 21-04-2016 VFU_RS11420 0966038e6d90980abeb1ca483606f71c 528 PANTHER PTHR30365:SF0 1 310 7.3E-276 T 21-04-2016 VFU_RS11420 0966038e6d90980abeb1ca483606f71c 528 PANTHER PTHR30365:SF0 376 520 7.3E-276 T 21-04-2016 VFU_RS11420 0966038e6d90980abeb1ca483606f71c 528 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 2.5E-179 T 21-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 VFU_RS05290 265441a36701aec8ae0645e1a4ec4156 802 PIRSF PIRSF006076 1 802 5.7E-245 T 21-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 VFU_RS05290 265441a36701aec8ae0645e1a4ec4156 802 Pfam PF07244 Surface antigen variable number repeat 266 344 5.3E-10 T 21-04-2016 IPR010827 Surface antigen variable number GO:0019867 VFU_RS05290 265441a36701aec8ae0645e1a4ec4156 802 Pfam PF07244 Surface antigen variable number repeat 92 172 1.5E-11 T 21-04-2016 IPR010827 Surface antigen variable number GO:0019867 VFU_RS05290 265441a36701aec8ae0645e1a4ec4156 802 Pfam PF07244 Surface antigen variable number repeat 176 263 5.3E-17 T 21-04-2016 IPR010827 Surface antigen variable number GO:0019867 VFU_RS05290 265441a36701aec8ae0645e1a4ec4156 802 Pfam PF07244 Surface antigen variable number repeat 348 420 1.1E-15 T 21-04-2016 IPR010827 Surface antigen variable number GO:0019867 VFU_RS05290 265441a36701aec8ae0645e1a4ec4156 802 PANTHER PTHR12815 689 802 2.0E-285 T 21-04-2016 VFU_RS05290 265441a36701aec8ae0645e1a4ec4156 802 PANTHER PTHR12815 5 673 2.0E-285 T 21-04-2016 VFU_RS05290 265441a36701aec8ae0645e1a4ec4156 802 Gene3D G3DSA:2.40.160.50 404 801 9.2E-20 T 21-04-2016 VFU_RS05290 265441a36701aec8ae0645e1a4ec4156 802 Pfam PF01103 Surface antigen 448 802 3.9E-90 T 21-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 VFU_RS05290 265441a36701aec8ae0645e1a4ec4156 802 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 802 25.797 T 21-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 VFU_RS05290 265441a36701aec8ae0645e1a4ec4156 802 PANTHER PTHR12815:SF11 689 802 2.0E-285 T 21-04-2016 VFU_RS05290 265441a36701aec8ae0645e1a4ec4156 802 PANTHER PTHR12815:SF11 5 673 2.0E-285 T 21-04-2016 VFU_RS05290 265441a36701aec8ae0645e1a4ec4156 802 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 802 2.4E-280 T 21-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 VFU_RS07465 99e0a5d51f2d0245f00d1a4e2c23243c 154 PIRSF PIRSF020565 1 154 8.0E-61 T 21-04-2016 IPR016776 3-hydroxylacyl-(acyl carrier protein) dehydratase, predicted VFU_RS07465 99e0a5d51f2d0245f00d1a4e2c23243c 154 Gene3D G3DSA:3.10.129.10 4 139 2.9E-20 T 21-04-2016 IPR029069 HotDog domain VFU_RS07465 99e0a5d51f2d0245f00d1a4e2c23243c 154 SUPERFAMILY SSF54637 5 143 5.96E-27 T 21-04-2016 IPR029069 HotDog domain VFU_RS05955 6046a1687475ae6626996a5fa194ca3d 618 PANTHER PTHR37533 474 618 2.1E-47 T 21-04-2016 VFU_RS05955 6046a1687475ae6626996a5fa194ca3d 618 Pfam PF02120 Flagellar hook-length control protein FliK 489 572 2.3E-26 T 21-04-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal VFU_RS01125 f71ca32db850fd62da9869a8b0504ddf 261 Gene3D G3DSA:3.40.50.300 6 230 8.8E-57 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS01125 f71ca32db850fd62da9869a8b0504ddf 261 SUPERFAMILY SSF52540 6 231 9.84E-55 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS01125 f71ca32db850fd62da9869a8b0504ddf 261 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS01125 f71ca32db850fd62da9869a8b0504ddf 261 Pfam PF00005 ABC transporter 22 166 3.5E-28 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS01125 f71ca32db850fd62da9869a8b0504ddf 261 PANTHER PTHR24220 3 245 1.1E-114 T 21-04-2016 VFU_RS01125 f71ca32db850fd62da9869a8b0504ddf 261 PANTHER PTHR24220:SF266 3 245 1.1E-114 T 21-04-2016 VFU_RS01125 f71ca32db850fd62da9869a8b0504ddf 261 SMART SM00382 26 215 3.4E-13 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS14900 bee20447e2c1bcf65626f0fedf731dce 256 PANTHER PTHR24220:SF582 7 232 2.6E-70 T 21-04-2016 VFU_RS14900 bee20447e2c1bcf65626f0fedf731dce 256 SMART SM00382 31 208 1.7E-13 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS14900 bee20447e2c1bcf65626f0fedf731dce 256 Gene3D G3DSA:3.40.50.300 5 227 9.0E-53 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS14900 bee20447e2c1bcf65626f0fedf731dce 256 Pfam PF00005 ABC transporter 23 157 1.4E-23 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VFU_RS14900 bee20447e2c1bcf65626f0fedf731dce 256 PANTHER PTHR24220 7 232 2.6E-70 T 21-04-2016 VFU_RS14900 bee20447e2c1bcf65626f0fedf731dce 256 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VFU_RS14900 bee20447e2c1bcf65626f0fedf731dce 256 SUPERFAMILY SSF52540 8 223 1.16E-49 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS07500 5add8199c69f2153b4590af5b7559a35 576 Gene3D G3DSA:3.90.550.10 15 143 1.1E-12 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VFU_RS07500 5add8199c69f2153b4590af5b7559a35 576 PANTHER PTHR10859:SF84 15 251 5.6E-81 T 21-04-2016 VFU_RS07500 5add8199c69f2153b4590af5b7559a35 576 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 348 515 1.0E-10 T 21-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VFU_RS07500 5add8199c69f2153b4590af5b7559a35 576 Pfam PF00535 Glycosyl transferase family 2 14 134 3.5E-21 T 21-04-2016 IPR001173 Glycosyltransferase 2-like VFU_RS07500 5add8199c69f2153b4590af5b7559a35 576 PANTHER PTHR10859 15 251 5.6E-81 T 21-04-2016 VFU_RS07500 5add8199c69f2153b4590af5b7559a35 576 SUPERFAMILY SSF53448 14 242 1.93E-36 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VFU_RS12360 90bae5cc7f761d766c7f2b1026075d7e 134 PANTHER PTHR35813 1 131 1.3E-44 T 21-04-2016 VFU_RS12360 90bae5cc7f761d766c7f2b1026075d7e 134 PIRSF PIRSF016789 8 129 2.1E-43 T 21-04-2016 IPR007401 Protein of unknown function DUF454 VFU_RS12360 90bae5cc7f761d766c7f2b1026075d7e 134 Pfam PF04304 Protein of unknown function (DUF454) 10 123 3.3E-39 T 21-04-2016 IPR007401 Protein of unknown function DUF454 VFU_RS12360 90bae5cc7f761d766c7f2b1026075d7e 134 PANTHER PTHR35813:SF1 1 131 1.3E-44 T 21-04-2016 VFU_RS08770 47e47e7e9f37066460d061dba5a19433 473 PANTHER PTHR10283 90 466 2.4E-139 T 21-04-2016 VFU_RS08770 47e47e7e9f37066460d061dba5a19433 473 PANTHER PTHR10283 1 70 2.4E-139 T 21-04-2016 VFU_RS08770 47e47e7e9f37066460d061dba5a19433 473 PIRSF PIRSF002457 1 473 2.1E-113 T 21-04-2016 IPR030676 Citrate carrier CitT-related VFU_RS08770 47e47e7e9f37066460d061dba5a19433 473 PANTHER PTHR10283:SF92 90 466 2.4E-139 T 21-04-2016 VFU_RS08770 47e47e7e9f37066460d061dba5a19433 473 PANTHER PTHR10283:SF92 1 70 2.4E-139 T 21-04-2016 VFU_RS08770 47e47e7e9f37066460d061dba5a19433 473 Pfam PF00939 Sodium:sulfate symporter transmembrane region 5 463 6.6E-49 T 21-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VFU_RS08770 47e47e7e9f37066460d061dba5a19433 473 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 36 463 2.4E-78 T 21-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VFU_RS14425 daa0fbbb03d65bfb5987cd59f7e1d16d 376 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 370 1.1E-171 T 21-04-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 VFU_RS14425 daa0fbbb03d65bfb5987cd59f7e1d16d 376 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 374 1.8E-159 T 21-04-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 VFU_RS14425 daa0fbbb03d65bfb5987cd59f7e1d16d 376 PANTHER PTHR35806 1 376 8.3E-198 T 21-04-2016 VFU_RS14425 daa0fbbb03d65bfb5987cd59f7e1d16d 376 PIRSF PIRSF015658 1 376 3.4E-179 T 21-04-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 VFU_RS10860 ac623191ac369d295e97d1c0a9389fbf 133 Pfam PF03061 Thioesterase superfamily 26 98 4.5E-20 T 21-04-2016 IPR006683 Thioesterase domain VFU_RS10860 ac623191ac369d295e97d1c0a9389fbf 133 Gene3D G3DSA:3.10.129.10 7 131 2.4E-41 T 21-04-2016 IPR029069 HotDog domain VFU_RS10860 ac623191ac369d295e97d1c0a9389fbf 133 PANTHER PTHR11049:SF5 1 129 4.6E-70 T 21-04-2016 VFU_RS10860 ac623191ac369d295e97d1c0a9389fbf 133 PANTHER PTHR11049 1 129 4.6E-70 T 21-04-2016 VFU_RS10860 ac623191ac369d295e97d1c0a9389fbf 133 SUPERFAMILY SSF54637 9 131 8.49E-38 T 21-04-2016 IPR029069 HotDog domain VFU_RS12670 5c9e1c8c857b61dd498c16e8137fc1c8 320 Gene3D G3DSA:3.40.50.1400 202 319 1.0E-32 T 21-04-2016 VFU_RS12670 5c9e1c8c857b61dd498c16e8137fc1c8 320 Pfam PF00762 Ferrochelatase 6 319 3.8E-111 T 21-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 VFU_RS12670 5c9e1c8c857b61dd498c16e8137fc1c8 320 ProSitePatterns PS00534 Ferrochelatase signature. 189 207 - T 21-04-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 VFU_RS12670 5c9e1c8c857b61dd498c16e8137fc1c8 320 SUPERFAMILY SSF53800 4 320 5.1E-104 T 21-04-2016 VFU_RS12670 5c9e1c8c857b61dd498c16e8137fc1c8 320 PANTHER PTHR11108 1 320 2.6E-133 T 21-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 VFU_RS12670 5c9e1c8c857b61dd498c16e8137fc1c8 320 Hamap MF_00323 Ferrochelatase [hemH]. 5 320 37.49 T 21-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 VFU_RS12670 5c9e1c8c857b61dd498c16e8137fc1c8 320 Gene3D G3DSA:3.40.50.1400 4 201 6.2E-68 T 21-04-2016 VFU_RS12670 5c9e1c8c857b61dd498c16e8137fc1c8 320 TIGRFAM TIGR00109 hemH: ferrochelatase 2 319 1.7E-106 T 21-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 VFU_RS00480 ad66fa55e5cc07fceb98645583e5ca9a 230 PIRSF PIRSF028160 1 230 1.5E-102 T 21-04-2016 IPR016872 Uncharacterised conserved protein UCP028160 VFU_RS00480 ad66fa55e5cc07fceb98645583e5ca9a 230 Pfam PF08139 Prokaryotic membrane lipoprotein lipid attachment site 1 19 2.9E-5 T 21-04-2016 IPR012640 Membrane lipoprotein, lipid attachment site VFU_RS00480 ad66fa55e5cc07fceb98645583e5ca9a 230 Pfam PF07356 Protein of unknown function (DUF1481) 33 226 1.2E-59 T 21-04-2016 IPR010858 Protein of unknown function DUF1481 VFU_RS05980 5be550e3dde17661a8f58a72c3f63d1a 299 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 274 286 - T 21-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VFU_RS05980 5be550e3dde17661a8f58a72c3f63d1a 299 PANTHER PTHR30587 86 299 1.2E-122 T 21-04-2016 VFU_RS05980 5be550e3dde17661a8f58a72c3f63d1a 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 287 297 2.1E-19 T 21-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VFU_RS05980 5be550e3dde17661a8f58a72c3f63d1a 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 98 107 2.1E-19 T 21-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VFU_RS05980 5be550e3dde17661a8f58a72c3f63d1a 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 158 170 2.1E-19 T 21-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VFU_RS05980 5be550e3dde17661a8f58a72c3f63d1a 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 198 210 2.1E-19 T 21-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VFU_RS05980 5be550e3dde17661a8f58a72c3f63d1a 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 170 184 2.1E-19 T 21-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VFU_RS05980 5be550e3dde17661a8f58a72c3f63d1a 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 219 231 2.1E-19 T 21-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VFU_RS05980 5be550e3dde17661a8f58a72c3f63d1a 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 139 158 1.6E-65 T 21-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VFU_RS05980 5be550e3dde17661a8f58a72c3f63d1a 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 100 119 1.6E-65 T 21-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VFU_RS05980 5be550e3dde17661a8f58a72c3f63d1a 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 226 246 1.6E-65 T 21-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VFU_RS05980 5be550e3dde17661a8f58a72c3f63d1a 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 247 268 1.6E-65 T 21-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VFU_RS05980 5be550e3dde17661a8f58a72c3f63d1a 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 119 139 1.6E-65 T 21-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VFU_RS05980 5be550e3dde17661a8f58a72c3f63d1a 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 271 296 1.6E-65 T 21-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VFU_RS05980 5be550e3dde17661a8f58a72c3f63d1a 299 PANTHER PTHR30587:SF0 86 299 1.2E-122 T 21-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VFU_RS05980 5be550e3dde17661a8f58a72c3f63d1a 299 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 226 241 - T 21-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VFU_RS05980 5be550e3dde17661a8f58a72c3f63d1a 299 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 102 297 4.0E-84 T 21-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VFU_RS05980 5be550e3dde17661a8f58a72c3f63d1a 299 Pfam PF00813 FliP family 102 293 8.9E-80 T 21-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VFU_RS02930 fbe38d20a9bc8a6953bffcb9f2b81d4f 305 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 4 298 20.722 T 21-04-2016 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 VFU_RS02930 fbe38d20a9bc8a6953bffcb9f2b81d4f 305 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 13 296 1.2E-96 T 21-04-2016 VFU_RS02930 fbe38d20a9bc8a6953bffcb9f2b81d4f 305 PANTHER PTHR13929:SF0 2 301 1.5E-84 T 21-04-2016 VFU_RS02930 fbe38d20a9bc8a6953bffcb9f2b81d4f 305 Pfam PF01040 UbiA prenyltransferase family 21 272 2.8E-37 T 21-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 VFU_RS02930 fbe38d20a9bc8a6953bffcb9f2b81d4f 305 PANTHER PTHR13929 2 301 1.5E-84 T 21-04-2016 VFU_RS02930 fbe38d20a9bc8a6953bffcb9f2b81d4f 305 PIRSF PIRSF005355 1 303 4.3E-83 T 21-04-2016 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 VFU_RS14600 84b2db3ce6c8e101c4f776c992d83cae 106 Pfam PF14213 Domain of unknown function (DUF4325) 24 85 2.1E-17 T 21-04-2016 IPR025474 Domain of unknown function DUF4325 VFU_RS10375 d34128abdbf9d7cec668ee44398cd608 174 Pfam PF13505 Outer membrane protein beta-barrel domain 12 174 4.7E-10 T 21-04-2016 IPR027385 Outer membrane protein beta-barrel VFU_RS10375 d34128abdbf9d7cec668ee44398cd608 174 SUPERFAMILY SSF56925 25 174 9.42E-13 T 21-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VFU_RS10375 d34128abdbf9d7cec668ee44398cd608 174 Gene3D G3DSA:2.40.160.20 13 174 9.9E-11 T 21-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VFU_RS03420 44199878fff02a8750e0f7dd5ad1e217 206 Gene3D G3DSA:3.10.50.40 93 205 7.3E-43 T 21-04-2016 VFU_RS03420 44199878fff02a8750e0f7dd5ad1e217 206 PANTHER PTHR10516:SF320 86 205 3.1E-62 T 21-04-2016 VFU_RS03420 44199878fff02a8750e0f7dd5ad1e217 206 PANTHER PTHR10516:SF320 19 44 3.1E-62 T 21-04-2016 VFU_RS03420 44199878fff02a8750e0f7dd5ad1e217 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 2 108 6.7E-24 T 21-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 VFU_RS03420 44199878fff02a8750e0f7dd5ad1e217 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 117 203 1.3E-25 T 21-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 VFU_RS03420 44199878fff02a8750e0f7dd5ad1e217 206 SUPERFAMILY SSF54534 7 205 4.52E-54 T 21-04-2016 VFU_RS03420 44199878fff02a8750e0f7dd5ad1e217 206 Gene3D G3DSA:1.10.287.460 3 92 7.1E-24 T 21-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 VFU_RS03420 44199878fff02a8750e0f7dd5ad1e217 206 PANTHER PTHR10516 86 205 3.1E-62 T 21-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type VFU_RS03420 44199878fff02a8750e0f7dd5ad1e217 206 PANTHER PTHR10516 19 44 3.1E-62 T 21-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type VFU_RS10275 4efb1c9727395f120a267975eb4db3bc 342 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 342 128.893 T 21-04-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96|UniPathway: UPA00185 VFU_RS10275 4efb1c9727395f120a267975eb4db3bc 342 PANTHER PTHR15162 1 334 9.5E-68 T 21-04-2016 VFU_RS10275 4efb1c9727395f120a267975eb4db3bc 342 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 53 329 2.1E-68 T 21-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 VFU_RS10275 4efb1c9727395f120a267975eb4db3bc 342 Gene3D G3DSA:3.40.630.10 49 237 9.0E-12 T 21-04-2016 VFU_RS10275 4efb1c9727395f120a267975eb4db3bc 342 SUPERFAMILY SSF53187 9 329 3.18E-76 T 21-04-2016 VFU_RS10275 4efb1c9727395f120a267975eb4db3bc 342 PIRSF PIRSF017020 4 336 1.2E-120 T 21-04-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96|UniPathway: UPA00185 VFU_RS00800 e2172155b6a3f83388ac2eab881aff1f 364 Pfam PF00534 Glycosyl transferases group 1 179 339 3.4E-33 T 21-04-2016 IPR001296 Glycosyl transferase, family 1 VFU_RS00800 e2172155b6a3f83388ac2eab881aff1f 364 Pfam PF13439 Glycosyltransferase Family 4 25 167 1.9E-12 T 21-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain VFU_RS00800 e2172155b6a3f83388ac2eab881aff1f 364 PANTHER PTHR12526 1 363 2.1E-48 T 21-04-2016 VFU_RS00800 e2172155b6a3f83388ac2eab881aff1f 364 SUPERFAMILY SSF53756 23 362 8.57E-68 T 21-04-2016 VFU_RS00800 e2172155b6a3f83388ac2eab881aff1f 364 Gene3D G3DSA:3.40.50.2000 156 338 7.9E-28 T 21-04-2016 VFU_RS10025 9d6edc29781b952d2fc8c48a4d7eb6b4 144 ProDom PD021295 MATURATION HYDROGENLYASE FORMATE HYCH LYASE HYCE PROCESSING OXIDOREDUCTASE J COMPONENT 12 141 6.0E-30 T 21-04-2016 IPR010005 Formate hydrogenlyase maturation HycH VFU_RS10025 9d6edc29781b952d2fc8c48a4d7eb6b4 144 Pfam PF07450 Formate hydrogenlyase maturation protein HycH 12 141 1.2E-50 T 21-04-2016 IPR010005 Formate hydrogenlyase maturation HycH VFU_RS01540 30724192b8b7e94acb0400d95635c88c 510 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 25 311 1.6E-81 T 21-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VFU_RS01540 30724192b8b7e94acb0400d95635c88c 510 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 48 61 - T 21-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 VFU_RS01540 30724192b8b7e94acb0400d95635c88c 510 Gene3D G3DSA:3.40.50.1100 76 329 4.8E-80 T 21-04-2016 VFU_RS01540 30724192b8b7e94acb0400d95635c88c 510 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 10 508 2.8E-250 T 21-04-2016 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 VFU_RS01540 30724192b8b7e94acb0400d95635c88c 510 PANTHER PTHR10314 1 363 1.1E-201 T 21-04-2016 VFU_RS01540 30724192b8b7e94acb0400d95635c88c 510 SUPERFAMILY SSF55021 415 508 1.49E-25 T 21-04-2016 VFU_RS01540 30724192b8b7e94acb0400d95635c88c 510 Gene3D G3DSA:3.40.1020.10 335 508 1.4E-54 T 21-04-2016 VFU_RS01540 30724192b8b7e94acb0400d95635c88c 510 SUPERFAMILY SSF53686 10 360 1.57E-105 T 21-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VFU_RS01540 30724192b8b7e94acb0400d95635c88c 510 PANTHER PTHR10314:SF30 1 363 1.1E-201 T 21-04-2016 VFU_RS01540 30724192b8b7e94acb0400d95635c88c 510 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 324 414 1.1E-24 T 21-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 VFU_RS01540 30724192b8b7e94acb0400d95635c88c 510 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 420 508 4.4E-25 T 21-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 VFU_RS01540 30724192b8b7e94acb0400d95635c88c 510 SUPERFAMILY SSF55021 332 418 2.44E-27 T 21-04-2016 VFU_RS12085 e3394e812e5840a0691c7b6f317f8e34 311 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 46 245 1.1E-56 T 21-04-2016 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN VFU_RS12085 e3394e812e5840a0691c7b6f317f8e34 311 SUPERFAMILY SSF159501 21 273 1.74E-71 T 21-04-2016 VFU_RS12085 e3394e812e5840a0691c7b6f317f8e34 311 PIRSF PIRSF020419 1 289 1.1E-77 T 21-04-2016 IPR016773 Ferric uptake regulator, CjrA, predicted VFU_RS09565 dde71d15caf2364bef7b2bbe3ce89ea4 264 Pfam PF13503 Domain of unknown function (DUF4123) 31 126 3.9E-19 T 21-04-2016 IPR025391 Domain of unknown function DUF4123 VFU_RS15085 9a764983134d511af83ed10303e38cbc 481 PANTHER PTHR30624:SF4 14 481 3.5E-249 T 21-04-2016 VFU_RS15085 9a764983134d511af83ed10303e38cbc 481 SUPERFAMILY SSF111283 18 480 6.02E-128 T 21-04-2016 VFU_RS15085 9a764983134d511af83ed10303e38cbc 481 Pfam PF01523 Putative modulator of DNA gyrase 35 332 1.6E-61 T 21-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VFU_RS15085 9a764983134d511af83ed10303e38cbc 481 PIRSF PIRSF004919 15 481 4.0E-142 T 21-04-2016 IPR025502 TldD KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VFU_RS15085 9a764983134d511af83ed10303e38cbc 481 PANTHER PTHR30624 14 481 3.5E-249 T 21-04-2016 VFU_RS11865 0a23e4effecae9da5718134301375a81 159 SUPERFAMILY SSF56524 32 157 1.44E-11 T 21-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 VFU_RS05780 0dd75c74d29f23c047362d685172b3f5 155 Gene3D G3DSA:3.40.30.10 2 153 1.1E-47 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS05780 0dd75c74d29f23c047362d685172b3f5 155 Pfam PF00578 AhpC/TSA family 7 134 1.8E-34 T 21-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 VFU_RS05780 0dd75c74d29f23c047362d685172b3f5 155 SUPERFAMILY SSF52833 4 154 1.74E-46 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS05780 0dd75c74d29f23c047362d685172b3f5 155 PANTHER PTHR10681 1 136 1.3E-47 T 21-04-2016 VFU_RS06365 9129f2bbe4da7c4b6887a6b4182699ed 306 PRINTS PR01270 Histone deacetylase superfamily signature 155 170 1.8E-16 T 21-04-2016 IPR000286 Histone deacetylase superfamily VFU_RS06365 9129f2bbe4da7c4b6887a6b4182699ed 306 PRINTS PR01270 Histone deacetylase superfamily signature 121 144 1.8E-16 T 21-04-2016 IPR000286 Histone deacetylase superfamily VFU_RS06365 9129f2bbe4da7c4b6887a6b4182699ed 306 PRINTS PR01270 Histone deacetylase superfamily signature 229 239 1.8E-16 T 21-04-2016 IPR000286 Histone deacetylase superfamily VFU_RS06365 9129f2bbe4da7c4b6887a6b4182699ed 306 PANTHER PTHR10625:SF131 1 290 3.7E-112 T 21-04-2016 VFU_RS06365 9129f2bbe4da7c4b6887a6b4182699ed 306 Pfam PF00850 Histone deacetylase domain 26 285 2.7E-47 T 21-04-2016 IPR023801 Histone deacetylase domain VFU_RS06365 9129f2bbe4da7c4b6887a6b4182699ed 306 Gene3D G3DSA:3.40.800.20 2 285 1.0E-62 T 21-04-2016 IPR023801 Histone deacetylase domain VFU_RS06365 9129f2bbe4da7c4b6887a6b4182699ed 306 SUPERFAMILY SSF52768 3 286 6.23E-78 T 21-04-2016 VFU_RS06365 9129f2bbe4da7c4b6887a6b4182699ed 306 PANTHER PTHR10625 1 290 3.7E-112 T 21-04-2016 IPR000286 Histone deacetylase superfamily VFU_RS06395 9018bae32df59675ccbcb7815793e7a3 399 PANTHER PTHR23502 1 369 4.4E-180 T 21-04-2016 VFU_RS06395 9018bae32df59675ccbcb7815793e7a3 399 PANTHER PTHR23502:SF57 1 369 4.4E-180 T 21-04-2016 VFU_RS06395 9018bae32df59675ccbcb7815793e7a3 399 Gene3D G3DSA:1.20.1250.20 204 394 3.2E-9 T 21-04-2016 VFU_RS06395 9018bae32df59675ccbcb7815793e7a3 399 Gene3D G3DSA:1.20.1250.20 3 187 4.5E-31 T 21-04-2016 VFU_RS06395 9018bae32df59675ccbcb7815793e7a3 399 SUPERFAMILY SSF103473 3 388 1.96E-51 T 21-04-2016 IPR020846 Major facilitator superfamily domain VFU_RS06395 9018bae32df59675ccbcb7815793e7a3 399 Pfam PF07690 Major Facilitator Superfamily 9 351 1.9E-41 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VFU_RS04340 e2e3f63183fd80ddc1e42ada63d30b69 175 Gene3D G3DSA:3.40.50.2020 2 172 6.3E-78 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like VFU_RS04340 e2e3f63183fd80ddc1e42ada63d30b69 175 Pfam PF00156 Phosphoribosyl transferase domain 12 159 5.6E-26 T 21-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 VFU_RS04340 e2e3f63183fd80ddc1e42ada63d30b69 175 PANTHER PTHR22573 1 174 5.7E-78 T 21-04-2016 VFU_RS04340 e2e3f63183fd80ddc1e42ada63d30b69 175 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 172 4.7E-72 T 21-04-2016 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620|UniPathway: UPA00591 VFU_RS04340 e2e3f63183fd80ddc1e42ada63d30b69 175 SUPERFAMILY SSF53271 3 173 3.93E-54 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like VFU_RS04340 e2e3f63183fd80ddc1e42ada63d30b69 175 PANTHER PTHR22573:SF56 1 174 5.7E-78 T 21-04-2016 VFU_RS22445 37d35eea575b804a29b19059fdc07bb7 213 Pfam PF00512 His Kinase A (phospho-acceptor) domain 107 170 3.1E-14 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS22445 37d35eea575b804a29b19059fdc07bb7 213 PANTHER PTHR24423 49 210 6.7E-18 T 21-04-2016 VFU_RS22445 37d35eea575b804a29b19059fdc07bb7 213 Gene3D G3DSA:1.10.287.130 98 170 9.9E-13 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS22445 37d35eea575b804a29b19059fdc07bb7 213 SMART SM00388 105 174 1.0E-11 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS22445 37d35eea575b804a29b19059fdc07bb7 213 SUPERFAMILY SSF47384 88 171 1.0E-13 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VFU_RS00905 32f0a992cf9dbde48748da97132a3539 145 Pfam PF10980 Protein of unknown function (DUF2787) 14 139 2.5E-41 T 21-04-2016 IPR021248 Protein of unknown function DUF2787 VFU_RS00905 32f0a992cf9dbde48748da97132a3539 145 PANTHER PTHR38978:SF1 1 141 1.1E-117 T 21-04-2016 VFU_RS00905 32f0a992cf9dbde48748da97132a3539 145 PANTHER PTHR38978 1 141 1.1E-117 T 21-04-2016 VFU_RS12995 1a583ea32fbfc05caeb1bc3b67e936be 225 PANTHER PTHR30450 1 225 2.4E-119 T 21-04-2016 VFU_RS12995 1a583ea32fbfc05caeb1bc3b67e936be 225 PANTHER PTHR30450:SF1 1 225 2.4E-119 T 21-04-2016 VFU_RS12995 1a583ea32fbfc05caeb1bc3b67e936be 225 Gene3D G3DSA:1.10.3720.10 14 224 4.2E-44 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS12995 1a583ea32fbfc05caeb1bc3b67e936be 225 SUPERFAMILY SSF161098 15 210 3.53E-47 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS12995 1a583ea32fbfc05caeb1bc3b67e936be 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 223 1.7E-23 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS04800 8772673d1ab7df39d88311db3e66be66 520 PRINTS PR01806 Virulence factor MviN signature 54 70 2.0E-76 T 21-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VFU_RS04800 8772673d1ab7df39d88311db3e66be66 520 PRINTS PR01806 Virulence factor MviN signature 35 54 2.0E-76 T 21-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VFU_RS04800 8772673d1ab7df39d88311db3e66be66 520 PRINTS PR01806 Virulence factor MviN signature 142 166 2.0E-76 T 21-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VFU_RS04800 8772673d1ab7df39d88311db3e66be66 520 PRINTS PR01806 Virulence factor MviN signature 166 187 2.0E-76 T 21-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VFU_RS04800 8772673d1ab7df39d88311db3e66be66 520 PRINTS PR01806 Virulence factor MviN signature 268 294 2.0E-76 T 21-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VFU_RS04800 8772673d1ab7df39d88311db3e66be66 520 PRINTS PR01806 Virulence factor MviN signature 418 435 2.0E-76 T 21-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VFU_RS04800 8772673d1ab7df39d88311db3e66be66 520 PRINTS PR01806 Virulence factor MviN signature 366 385 2.0E-76 T 21-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VFU_RS04800 8772673d1ab7df39d88311db3e66be66 520 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 5 511 7.4E-135 T 21-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VFU_RS04800 8772673d1ab7df39d88311db3e66be66 520 PIRSF PIRSF002869 1 518 4.5E-151 T 21-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VFU_RS04800 8772673d1ab7df39d88311db3e66be66 520 PANTHER PTHR11206:SF90 69 84 1.1E-95 T 21-04-2016 VFU_RS04800 8772673d1ab7df39d88311db3e66be66 520 PANTHER PTHR11206:SF90 226 507 1.1E-95 T 21-04-2016 VFU_RS04800 8772673d1ab7df39d88311db3e66be66 520 Pfam PF03023 MviN-like protein 30 478 2.6E-140 T 21-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VFU_RS04800 8772673d1ab7df39d88311db3e66be66 520 PANTHER PTHR11206 69 84 1.1E-95 T 21-04-2016 VFU_RS04800 8772673d1ab7df39d88311db3e66be66 520 PANTHER PTHR11206 226 507 1.1E-95 T 21-04-2016 VFU_RS10350 d4a18427f78278ca64757ae9142bf86a 473 SMART SM00479 7 200 0.0089 T 21-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VFU_RS10350 d4a18427f78278ca64757ae9142bf86a 473 PANTHER PTHR11046:SF2 2 472 7.3E-273 T 21-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 VFU_RS10350 d4a18427f78278ca64757ae9142bf86a 473 PANTHER PTHR11046 2 472 7.3E-273 T 21-04-2016 VFU_RS10350 d4a18427f78278ca64757ae9142bf86a 473 SUPERFAMILY SSF53098 6 471 4.14E-136 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VFU_RS10350 d4a18427f78278ca64757ae9142bf86a 473 Gene3D G3DSA:3.30.420.10 2 196 2.8E-81 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VFU_RS10350 d4a18427f78278ca64757ae9142bf86a 473 Pfam PF00929 Exonuclease 10 190 1.0E-22 T 21-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VFU_RS10350 d4a18427f78278ca64757ae9142bf86a 473 PIRSF PIRSF000977 1 473 5.1E-197 T 21-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 VFU_RS10350 d4a18427f78278ca64757ae9142bf86a 473 Pfam PF08411 Exonuclease C-terminal 209 469 2.1E-104 T 21-04-2016 IPR013620 Exonuclease C-terminal GO:0006281|GO:0008852 VFU_RS02750 a40fba22c880ab81369a0e5babe7156d 88 Pfam PF13937 Domain of unknown function (DUF4212) 9 86 3.6E-34 T 21-04-2016 IPR019886 Sodium symporter small subunit, predicted VFU_RS02750 a40fba22c880ab81369a0e5babe7156d 88 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 11 87 7.1E-35 T 21-04-2016 IPR019886 Sodium symporter small subunit, predicted VFU_RS07755 643191a51bde729f2e052ed42aa92aba 265 PANTHER PTHR33973 11 249 4.4E-66 T 21-04-2016 VFU_RS07755 643191a51bde729f2e052ed42aa92aba 265 Pfam PF07103 Protein of unknown function (DUF1365) 13 249 1.9E-68 T 21-04-2016 IPR010775 Protein of unknown function DUF1365 VFU_RS04270 6503ad9c0a19ed796f7efb33a0fa6c45 408 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 168 196 - T 21-04-2016 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 VFU_RS04270 6503ad9c0a19ed796f7efb33a0fa6c45 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 372 386 5.0E-20 T 21-04-2016 IPR003004 GspF/PilC family VFU_RS04270 6503ad9c0a19ed796f7efb33a0fa6c45 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 69 81 5.0E-20 T 21-04-2016 IPR003004 GspF/PilC family VFU_RS04270 6503ad9c0a19ed796f7efb33a0fa6c45 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 388 407 5.0E-20 T 21-04-2016 IPR003004 GspF/PilC family VFU_RS04270 6503ad9c0a19ed796f7efb33a0fa6c45 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 168 196 5.0E-20 T 21-04-2016 IPR003004 GspF/PilC family VFU_RS04270 6503ad9c0a19ed796f7efb33a0fa6c45 408 Pfam PF00482 Type II secretion system (T2SS), protein F 74 196 1.8E-32 T 21-04-2016 IPR018076 Type II secretion system F domain VFU_RS04270 6503ad9c0a19ed796f7efb33a0fa6c45 408 Pfam PF00482 Type II secretion system (T2SS), protein F 277 399 2.9E-27 T 21-04-2016 IPR018076 Type II secretion system F domain VFU_RS04270 6503ad9c0a19ed796f7efb33a0fa6c45 408 PANTHER PTHR30012 10 408 6.6E-157 T 21-04-2016 VFU_RS04270 6503ad9c0a19ed796f7efb33a0fa6c45 408 PANTHER PTHR30012:SF0 10 408 6.6E-157 T 21-04-2016 VFU_RS11830 439bd3b6c8777a3169a5dfd108c4cf32 415 PANTHER PTHR30061:SF22 19 414 2.3E-109 T 21-04-2016 VFU_RS11830 439bd3b6c8777a3169a5dfd108c4cf32 415 Gene3D G3DSA:3.40.190.10 141 340 1.2E-23 T 21-04-2016 VFU_RS11830 439bd3b6c8777a3169a5dfd108c4cf32 415 PANTHER PTHR30061 19 414 2.3E-109 T 21-04-2016 VFU_RS11830 439bd3b6c8777a3169a5dfd108c4cf32 415 SUPERFAMILY SSF53850 21 413 2.75E-55 T 21-04-2016 VFU_RS11830 439bd3b6c8777a3169a5dfd108c4cf32 415 Pfam PF01547 Bacterial extracellular solute-binding protein 58 284 2.2E-17 T 21-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 VFU_RS04505 6ca149a78edac9e65ac8779d54dcaabd 361 Pfam PF01594 Domain of unknown function DUF20 14 347 6.7E-52 T 21-04-2016 IPR002549 Transmembrane protein TqsA-like VFU_RS04505 6ca149a78edac9e65ac8779d54dcaabd 361 PANTHER PTHR21716:SF13 13 361 1.4E-104 T 21-04-2016 VFU_RS04505 6ca149a78edac9e65ac8779d54dcaabd 361 PANTHER PTHR21716 13 361 1.4E-104 T 21-04-2016 IPR002549 Transmembrane protein TqsA-like VFU_RS11970 e39d5856615179c0bcd60a5d3305deb6 92 Pfam PF05166 YcgL domain 3 74 2.5E-33 T 21-04-2016 IPR027354 YcgL domain VFU_RS11970 e39d5856615179c0bcd60a5d3305deb6 92 Hamap MF_01866 Protein YcgL [ycgL]. 1 87 27.99 T 21-04-2016 IPR027354 YcgL domain VFU_RS11970 e39d5856615179c0bcd60a5d3305deb6 92 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 69 3.0E-30 T 21-04-2016 IPR027354 YcgL domain VFU_RS11970 e39d5856615179c0bcd60a5d3305deb6 92 PANTHER PTHR38109 2 90 2.6E-36 T 21-04-2016 VFU_RS11970 e39d5856615179c0bcd60a5d3305deb6 92 SUPERFAMILY SSF160191 1 90 4.58E-38 T 21-04-2016 VFU_RS02920 7409589630dbb9459f86abd9c68d1a20 185 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 1.2E-86 T 21-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 VFU_RS02920 7409589630dbb9459f86abd9c68d1a20 185 PIRSF PIRSF039093 1 174 9.9E-87 T 21-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 VFU_RS02920 7409589630dbb9459f86abd9c68d1a20 185 Gene3D G3DSA:3.60.20.10 2 173 6.6E-86 T 21-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VFU_RS02920 7409589630dbb9459f86abd9c68d1a20 185 Pfam PF00227 Proteasome subunit 2 169 2.1E-23 T 21-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 VFU_RS02920 7409589630dbb9459f86abd9c68d1a20 185 PANTHER PTHR32194 2 177 3.5E-129 T 21-04-2016 VFU_RS02920 7409589630dbb9459f86abd9c68d1a20 185 SUPERFAMILY SSF56235 2 172 1.49E-57 T 21-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VFU_RS02920 7409589630dbb9459f86abd9c68d1a20 185 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 41.972 T 21-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 VFU_RS13720 f37e75c35bb5f7a855e1f765dce514ee 199 Pfam PF01965 DJ-1/PfpI family 3 169 2.2E-37 T 21-04-2016 IPR002818 DJ-1/PfpI VFU_RS13720 f37e75c35bb5f7a855e1f765dce514ee 199 PANTHER PTHR11019:SF4 1 194 3.8E-59 T 21-04-2016 VFU_RS13720 f37e75c35bb5f7a855e1f765dce514ee 199 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 4 182 2.5E-62 T 21-04-2016 IPR006287 DJ-1 VFU_RS13720 f37e75c35bb5f7a855e1f765dce514ee 199 SUPERFAMILY SSF52317 3 191 2.4E-45 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like VFU_RS13720 f37e75c35bb5f7a855e1f765dce514ee 199 PANTHER PTHR11019 1 194 3.8E-59 T 21-04-2016 VFU_RS13720 f37e75c35bb5f7a855e1f765dce514ee 199 Gene3D G3DSA:3.40.50.880 1 190 1.4E-52 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like VFU_RS08590 1b90618d7d1a7f9075f7dabcc9bb94d6 179 PANTHER PTHR35011:SF4 1 174 9.7E-88 T 21-04-2016 VFU_RS08590 1b90618d7d1a7f9075f7dabcc9bb94d6 179 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 30 161 1.7E-25 T 21-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component VFU_RS08590 1b90618d7d1a7f9075f7dabcc9bb94d6 179 PANTHER PTHR35011 1 174 9.7E-88 T 21-04-2016 VFU_RS00700 b9069bfb2e37951c8ee046c131cf2c5e 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 101 114 6.0E-28 T 21-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VFU_RS00700 b9069bfb2e37951c8ee046c131cf2c5e 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 79 94 6.0E-28 T 21-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VFU_RS00700 b9069bfb2e37951c8ee046c131cf2c5e 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 45 61 6.0E-28 T 21-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VFU_RS00700 b9069bfb2e37951c8ee046c131cf2c5e 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 117 132 6.0E-28 T 21-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VFU_RS00700 b9069bfb2e37951c8ee046c131cf2c5e 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 5 22 6.0E-28 T 21-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VFU_RS00700 b9069bfb2e37951c8ee046c131cf2c5e 146 SUPERFAMILY SSF52788 1 146 2.75E-42 T 21-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily VFU_RS00700 b9069bfb2e37951c8ee046c131cf2c5e 146 Gene3D G3DSA:3.40.50.270 2 146 1.1E-44 T 21-04-2016 VFU_RS00700 b9069bfb2e37951c8ee046c131cf2c5e 146 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 143 4.5E-37 T 21-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily VFU_RS00700 b9069bfb2e37951c8ee046c131cf2c5e 146 SMART SM00226 3 145 4.8E-54 T 21-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily VFU_RS00700 b9069bfb2e37951c8ee046c131cf2c5e 146 PANTHER PTHR11717:SF20 1 146 5.0E-50 T 21-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VFU_RS00700 b9069bfb2e37951c8ee046c131cf2c5e 146 PANTHER PTHR11717 1 146 5.0E-50 T 21-04-2016 VFU_RS03360 73e6eb042b1744fac4a3ac82df9b4794 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 3.4E-43 T 21-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS03360 73e6eb042b1744fac4a3ac82df9b4794 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 1.4E-42 T 21-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS03360 73e6eb042b1744fac4a3ac82df9b4794 117 Gene3D G3DSA:3.30.420.100 24 117 4.7E-35 T 21-04-2016 VFU_RS03360 73e6eb042b1744fac4a3ac82df9b4794 117 SUPERFAMILY SSF53137 3 115 2.83E-50 T 21-04-2016 VFU_RS03360 73e6eb042b1744fac4a3ac82df9b4794 117 PANTHER PTHR12899 1 117 1.6E-46 T 21-04-2016 VFU_RS03360 73e6eb042b1744fac4a3ac82df9b4794 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 25.576 T 21-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VFU_RS02650 a57e25bfe0a75e4b33e3a290d60d8f94 256 Pfam PF00561 alpha/beta hydrolase fold 16 241 8.8E-24 T 21-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VFU_RS02650 a57e25bfe0a75e4b33e3a290d60d8f94 256 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 5 254 45.043 T 21-04-2016 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519|UniPathway: UPA00078 VFU_RS02650 a57e25bfe0a75e4b33e3a290d60d8f94 256 PANTHER PTHR10992 5 255 1.0E-115 T 21-04-2016 VFU_RS02650 a57e25bfe0a75e4b33e3a290d60d8f94 256 PANTHER PTHR10992:SF812 5 255 1.0E-115 T 21-04-2016 VFU_RS02650 a57e25bfe0a75e4b33e3a290d60d8f94 256 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 12 252 1.4E-106 T 21-04-2016 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519|UniPathway: UPA00078 VFU_RS02650 a57e25bfe0a75e4b33e3a290d60d8f94 256 Gene3D G3DSA:3.40.50.1820 5 253 3.6E-54 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold VFU_RS02650 a57e25bfe0a75e4b33e3a290d60d8f94 256 SUPERFAMILY SSF53474 5 252 7.14E-50 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold VFU_RS08840 d26cbe660cfdcc1c2ad4e26996ad216d 516 PANTHER PTHR35342 1 510 2.6E-293 T 21-04-2016 VFU_RS08840 d26cbe660cfdcc1c2ad4e26996ad216d 516 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 18 444 7.5E-141 T 21-04-2016 IPR002823 Protein of unknown function DUF112, transmembrane VFU_RS08840 d26cbe660cfdcc1c2ad4e26996ad216d 516 PANTHER PTHR35342:SF2 1 510 2.6E-293 T 21-04-2016 VFU_RS05500 261c58c5e3c24bc369e92af7077f7713 107 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 4 102 1.8E-23 T 21-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 VFU_RS05500 261c58c5e3c24bc369e92af7077f7713 107 Pfam PF04316 Anti-sigma-28 factor, FlgM 45 98 1.2E-17 T 21-04-2016 IPR031316 Anti-sigma-28 factor FlgM, C-terminal VFU_RS05500 261c58c5e3c24bc369e92af7077f7713 107 SUPERFAMILY SSF101498 2 101 4.58E-20 T 21-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 VFU_RS05750 2139e01110a7533a16312f8dba561a7e 191 Pfam PF03358 NADPH-dependent FMN reductase 48 135 2.2E-11 T 21-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 VFU_RS05750 2139e01110a7533a16312f8dba561a7e 191 Gene3D G3DSA:3.40.50.360 3 189 1.1E-64 T 21-04-2016 IPR029039 Flavoprotein-like domain VFU_RS05750 2139e01110a7533a16312f8dba561a7e 191 SUPERFAMILY SSF52218 4 188 5.77E-55 T 21-04-2016 IPR029039 Flavoprotein-like domain VFU_RS05750 2139e01110a7533a16312f8dba561a7e 191 PANTHER PTHR30546 1 189 5.5E-69 T 21-04-2016 VFU_RS05750 2139e01110a7533a16312f8dba561a7e 191 ProSitePatterns PS00201 Flavodoxin signature. 7 23 - T 21-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 VFU_RS08410 8c83551ca8b5006796e821344774ddcc 817 PANTHER PTHR30489:SF6 215 816 4.0E-297 T 21-04-2016 VFU_RS08410 8c83551ca8b5006796e821344774ddcc 817 PANTHER PTHR30489:SF6 1 186 4.0E-297 T 21-04-2016 VFU_RS08410 8c83551ca8b5006796e821344774ddcc 817 Pfam PF12704 MacB-like periplasmic core domain 465 656 5.3E-7 T 21-04-2016 IPR025857 MacB-like periplasmic core domain VFU_RS08410 8c83551ca8b5006796e821344774ddcc 817 Pfam PF02687 FtsX-like permease family 244 368 7.7E-9 T 21-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 VFU_RS08410 8c83551ca8b5006796e821344774ddcc 817 Pfam PF02687 FtsX-like permease family 693 808 2.4E-8 T 21-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 VFU_RS08410 8c83551ca8b5006796e821344774ddcc 817 Gene3D G3DSA:2.40.40.20 568 626 8.2E-4 T 21-04-2016 VFU_RS08410 8c83551ca8b5006796e821344774ddcc 817 PANTHER PTHR30489 215 816 4.0E-297 T 21-04-2016 VFU_RS08410 8c83551ca8b5006796e821344774ddcc 817 PANTHER PTHR30489 1 186 4.0E-297 T 21-04-2016 VFU_RS02040 6c87f422bd508489086a3d410a265797 332 Pfam PF02653 Branched-chain amino acid transport system / permease component 35 302 4.6E-47 T 21-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 VFU_RS02040 6c87f422bd508489086a3d410a265797 332 PANTHER PTHR32196:SF23 1 329 7.6E-185 T 21-04-2016 VFU_RS02040 6c87f422bd508489086a3d410a265797 332 PANTHER PTHR32196 1 329 7.6E-185 T 21-04-2016 VFU_RS09350 73a5fdd2e260452a409aab9403d5f5e4 216 Pfam PF07750 GcrA cell cycle regulator 39 85 8.0E-6 T 21-04-2016 IPR011681 GcrA cell cycle regulator VFU_RS00955 d83425a0dbfcfbe61f29b5a7b38acbce 164 SUPERFAMILY SSF49503 56 163 1.83E-19 T 21-04-2016 IPR008972 Cupredoxin VFU_RS00955 d83425a0dbfcfbe61f29b5a7b38acbce 164 Gene3D G3DSA:2.60.40.420 43 162 2.7E-22 T 21-04-2016 IPR008972 Cupredoxin VFU_RS09195 1bb24349a62e9b5e4f21a335a3191e42 65 TIGRFAM TIGR02811 formate_TAT: formate dehydrogenase region TAT target 1 65 1.7E-25 T 21-04-2016 IPR014177 Putative formate dehydrogenase, TAT signal-containing VFU_RS09195 1bb24349a62e9b5e4f21a335a3191e42 65 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 10 37 1.1E-4 T 21-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VFU_RS09195 1bb24349a62e9b5e4f21a335a3191e42 65 PIRSF PIRSF036704 1 65 5.0E-31 T 21-04-2016 IPR014177 Putative formate dehydrogenase, TAT signal-containing VFU_RS11935 92929880f760ab937d88841710975585 698 PANTHER PTHR30183 137 693 0.0 T 21-04-2016 VFU_RS11935 92929880f760ab937d88841710975585 698 SUPERFAMILY SSF161098 150 410 1.42E-41 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS11935 92929880f760ab937d88841710975585 698 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 505 682 1.8E-13 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS11935 92929880f760ab937d88841710975585 698 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 213 404 7.3E-15 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS11935 92929880f760ab937d88841710975585 698 SUPERFAMILY SSF161098 439 679 8.04E-45 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS11935 92929880f760ab937d88841710975585 698 PANTHER PTHR30183:SF7 137 693 0.0 T 21-04-2016 VFU_RS11935 92929880f760ab937d88841710975585 698 Gene3D G3DSA:1.10.3720.10 151 407 5.5E-42 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS11935 92929880f760ab937d88841710975585 698 Gene3D G3DSA:1.10.3720.10 436 685 2.2E-43 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS11600 b77334584957af3f3ba4ed32caf04655 176 PANTHER PTHR40547 1 176 5.7E-54 T 21-04-2016 VFU_RS11600 b77334584957af3f3ba4ed32caf04655 176 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 23 164 6.8E-46 T 21-04-2016 IPR018639 Domain of unknown function DUF2062 VFU_RS11600 b77334584957af3f3ba4ed32caf04655 176 PANTHER PTHR40547:SF1 1 176 5.7E-54 T 21-04-2016 VFU_RS02120 4b8edf17b39eb4353feb77498899b6b2 212 SUPERFAMILY SSF55718 15 117 4.0E-11 T 21-04-2016 IPR003033 SCP2 sterol-binding domain VFU_RS02120 4b8edf17b39eb4353feb77498899b6b2 212 Gene3D G3DSA:3.30.1050.10 19 116 5.7E-6 T 21-04-2016 IPR003033 SCP2 sterol-binding domain VFU_RS02120 4b8edf17b39eb4353feb77498899b6b2 212 PANTHER PTHR38693:SF1 1 205 1.9E-65 T 21-04-2016 VFU_RS02120 4b8edf17b39eb4353feb77498899b6b2 212 PANTHER PTHR38693 1 205 1.9E-65 T 21-04-2016 VFU_RS02120 4b8edf17b39eb4353feb77498899b6b2 212 Pfam PF02036 SCP-2 sterol transfer family 15 111 2.8E-24 T 21-04-2016 IPR003033 SCP2 sterol-binding domain VFU_RS11460 885ab1d096ec9b6dada7a40557134ac1 125 Gene3D G3DSA:3.10.450.50 1 124 4.6E-41 T 21-04-2016 IPR032710 NTF2-like domain VFU_RS11460 885ab1d096ec9b6dada7a40557134ac1 125 Pfam PF02810 SEC-C motif 106 124 9.8E-11 T 21-04-2016 IPR004027 SEC-C motif VFU_RS11460 885ab1d096ec9b6dada7a40557134ac1 125 PANTHER PTHR33747 1 124 9.4E-26 T 21-04-2016 VFU_RS11460 885ab1d096ec9b6dada7a40557134ac1 125 PANTHER PTHR33747:SF1 1 124 9.4E-26 T 21-04-2016 VFU_RS11460 885ab1d096ec9b6dada7a40557134ac1 125 SUPERFAMILY SSF103642 103 125 4.74E-9 T 21-04-2016 VFU_RS11460 885ab1d096ec9b6dada7a40557134ac1 125 SUPERFAMILY SSF54427 1 95 3.42E-27 T 21-04-2016 IPR032710 NTF2-like domain VFU_RS13295 8dff77d09a2eef1c8452b4889f9b1c45 449 PANTHER PTHR30408 11 233 7.2E-40 T 21-04-2016 VFU_RS13295 8dff77d09a2eef1c8452b4889f9b1c45 449 SUPERFAMILY SSF116734 7 219 1.01E-37 T 21-04-2016 VFU_RS13295 8dff77d09a2eef1c8452b4889f9b1c45 449 SUPERFAMILY SSF116734 218 436 6.05E-39 T 21-04-2016 VFU_RS13295 8dff77d09a2eef1c8452b4889f9b1c45 449 PANTHER PTHR30408:SF6 11 233 7.2E-40 T 21-04-2016 VFU_RS13295 8dff77d09a2eef1c8452b4889f9b1c45 449 Pfam PF01420 Type I restriction modification DNA specificity domain 50 196 1.7E-5 T 21-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 VFU_RS13295 8dff77d09a2eef1c8452b4889f9b1c45 449 Pfam PF01420 Type I restriction modification DNA specificity domain 260 392 6.6E-10 T 21-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 VFU_RS01120 1d6fc0bca799a3677a7867d6caac0e66 309 Gene3D G3DSA:3.40.50.1980 41 129 5.6E-31 T 21-04-2016 VFU_RS01120 1d6fc0bca799a3677a7867d6caac0e66 309 PANTHER PTHR30532 28 308 2.4E-52 T 21-04-2016 VFU_RS01120 1d6fc0bca799a3677a7867d6caac0e66 309 Gene3D G3DSA:3.40.50.1980 134 304 8.6E-44 T 21-04-2016 VFU_RS01120 1d6fc0bca799a3677a7867d6caac0e66 309 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 63 81 2.1E-7 T 21-04-2016 IPR008091 Ferrichrome-binding periplasmic protein VFU_RS01120 1d6fc0bca799a3677a7867d6caac0e66 309 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 94 109 2.1E-7 T 21-04-2016 IPR008091 Ferrichrome-binding periplasmic protein VFU_RS01120 1d6fc0bca799a3677a7867d6caac0e66 309 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 283 296 2.1E-7 T 21-04-2016 IPR008091 Ferrichrome-binding periplasmic protein VFU_RS01120 1d6fc0bca799a3677a7867d6caac0e66 309 PANTHER PTHR30532:SF1 28 308 2.4E-52 T 21-04-2016 VFU_RS01120 1d6fc0bca799a3677a7867d6caac0e66 309 Pfam PF01497 Periplasmic binding protein 47 276 1.1E-23 T 21-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 VFU_RS01120 1d6fc0bca799a3677a7867d6caac0e66 309 SUPERFAMILY SSF53807 27 299 4.32E-48 T 21-04-2016 VFU_RS00610 1e19ea5eb47ff8c25d3bb75c820b04c6 73 Gene3D G3DSA:1.10.1200.10 10 68 2.4E-4 T 21-04-2016 IPR009081 Phosphopantetheine binding ACP domain VFU_RS00610 1e19ea5eb47ff8c25d3bb75c820b04c6 73 SUPERFAMILY SSF47336 7 68 4.32E-5 T 21-04-2016 IPR009081 Phosphopantetheine binding ACP domain VFU_RS16375 a41466c5c07e588ec8d11ff14b7baf44 94 SUPERFAMILY SSF82714 40 94 9.55E-11 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VFU_RS16375 a41466c5c07e588ec8d11ff14b7baf44 94 Gene3D G3DSA:3.30.2090.10 41 94 9.7E-12 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VFU_RS16375 a41466c5c07e588ec8d11ff14b7baf44 94 PANTHER PTHR32063 1 94 1.8E-35 T 21-04-2016 VFU_RS16375 a41466c5c07e588ec8d11ff14b7baf44 94 PANTHER PTHR32063:SF19 1 94 1.8E-35 T 21-04-2016 VFU_RS16375 a41466c5c07e588ec8d11ff14b7baf44 94 Pfam PF00873 AcrB/AcrD/AcrF family 2 94 3.1E-13 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VFU_RS04850 0c86552096660e42f5ad20deb83f8bc3 370 PANTHER PTHR30605:SF2 1 370 6.7E-198 T 21-04-2016 VFU_RS04850 0c86552096660e42f5ad20deb83f8bc3 370 Pfam PF03702 Uncharacterised protein family (UPF0075) 6 369 5.4E-167 T 21-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 VFU_RS04850 0c86552096660e42f5ad20deb83f8bc3 370 SUPERFAMILY SSF53067 6 40 5.44E-27 T 21-04-2016 VFU_RS04850 0c86552096660e42f5ad20deb83f8bc3 370 SUPERFAMILY SSF53067 67 112 5.44E-27 T 21-04-2016 VFU_RS04850 0c86552096660e42f5ad20deb83f8bc3 370 SUPERFAMILY SSF53067 144 343 5.44E-27 T 21-04-2016 VFU_RS04850 0c86552096660e42f5ad20deb83f8bc3 370 PANTHER PTHR30605 1 370 6.7E-198 T 21-04-2016 VFU_RS04850 0c86552096660e42f5ad20deb83f8bc3 370 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 5 369 41.757 T 21-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 VFU_RS04850 0c86552096660e42f5ad20deb83f8bc3 370 Gene3D G3DSA:3.30.420.40 6 197 3.0E-71 T 21-04-2016 VFU_RS07285 9e8e584b0fc7884a251f6afe6c9b0661 434 PANTHER PTHR30011:SF28 1 434 1.1E-162 T 21-04-2016 VFU_RS07285 9e8e584b0fc7884a251f6afe6c9b0661 434 SUPERFAMILY SSF51679 5 434 4.19E-101 T 21-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 VFU_RS07285 9e8e584b0fc7884a251f6afe6c9b0661 434 PIRSF PIRSF000337 2 434 5.0E-130 T 21-04-2016 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 VFU_RS07285 9e8e584b0fc7884a251f6afe6c9b0661 434 PANTHER PTHR30011 1 434 1.1E-162 T 21-04-2016 VFU_RS07285 9e8e584b0fc7884a251f6afe6c9b0661 434 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 19 431 3.7E-114 T 21-04-2016 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 VFU_RS07285 9e8e584b0fc7884a251f6afe6c9b0661 434 Pfam PF00296 Luciferase-like monooxygenase 25 387 1.3E-51 T 21-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 VFU_RS07285 9e8e584b0fc7884a251f6afe6c9b0661 434 Gene3D G3DSA:3.20.20.30 348 434 3.8E-102 T 21-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 VFU_RS07285 9e8e584b0fc7884a251f6afe6c9b0661 434 Gene3D G3DSA:3.20.20.30 2 305 3.8E-102 T 21-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 VFU_RS05020 f02d3280556dee91b931dbd650e6b369 240 PIRSF PIRSF005426 1 240 9.1E-81 T 21-04-2016 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 VFU_RS05020 f02d3280556dee91b931dbd650e6b369 240 Gene3D G3DSA:3.40.109.10 1 239 9.3E-75 T 21-04-2016 IPR000415 Nitroreductase-like GO:0016491 VFU_RS05020 f02d3280556dee91b931dbd650e6b369 240 PANTHER PTHR23026:SF98 1 185 2.2E-75 T 21-04-2016 VFU_RS05020 f02d3280556dee91b931dbd650e6b369 240 SUPERFAMILY SSF55469 1 238 4.97E-72 T 21-04-2016 IPR000415 Nitroreductase-like GO:0016491 VFU_RS05020 f02d3280556dee91b931dbd650e6b369 240 Pfam PF00881 Nitroreductase family 8 159 2.5E-22 T 21-04-2016 IPR029479 Nitroreductase VFU_RS05020 f02d3280556dee91b931dbd650e6b369 240 PANTHER PTHR23026 1 185 2.2E-75 T 21-04-2016 VFU_RS12750 43529782661e39c29aa7cdcd64221185 149 Pfam PF01957 NfeD-like C-terminal, partner-binding 12 149 8.0E-23 T 21-04-2016 IPR002810 NfeD-like, C-terminal domain VFU_RS12750 43529782661e39c29aa7cdcd64221185 149 PANTHER PTHR33507:SF3 1 149 8.1E-38 T 21-04-2016 VFU_RS12750 43529782661e39c29aa7cdcd64221185 149 PANTHER PTHR33507 1 149 8.1E-38 T 21-04-2016 VFU_RS12750 43529782661e39c29aa7cdcd64221185 149 Gene3D G3DSA:2.40.50.140 93 148 3.1E-15 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS12750 43529782661e39c29aa7cdcd64221185 149 SUPERFAMILY SSF141322 87 147 2.09E-7 T 21-04-2016 VFU_RS01910 1e5e6b69b3f71e45447df005a6a88391 127 PANTHER PTHR28259 5 121 6.3E-38 T 21-04-2016 VFU_RS01910 1e5e6b69b3f71e45447df005a6a88391 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 9 119 7.7E-24 T 21-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 VFU_RS01910 1e5e6b69b3f71e45447df005a6a88391 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 7 125 19.233 T 21-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 VFU_RS01910 1e5e6b69b3f71e45447df005a6a88391 127 TIGRFAM TIGR00494 crcB: protein CrcB 9 121 8.0E-30 T 21-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 VFU_RS02850 d6ffea2f09b4d94cf17f1c2d43160550 181 PANTHER PTHR38102 2 167 2.8E-27 T 21-04-2016 VFU_RS02850 d6ffea2f09b4d94cf17f1c2d43160550 181 Pfam PF07813 LTXXQ motif family protein 41 145 2.7E-19 T 21-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 VFU_RS05150 50c935590b1f4de204761c6338e2894e 338 PANTHER PTHR33376 2 337 4.4E-57 T 21-04-2016 VFU_RS05150 50c935590b1f4de204761c6338e2894e 338 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 48 323 8.3E-46 T 21-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 VFU_RS06925 b89dda90e6e6070fb915c0da28b12045 445 PANTHER PTHR30288:SF0 1 444 3.7E-67 T 21-04-2016 VFU_RS06925 b89dda90e6e6070fb915c0da28b12045 445 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 2 100 3.0E-16 T 21-04-2016 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 VFU_RS06925 b89dda90e6e6070fb915c0da28b12045 445 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 216 439 1.4E-48 T 21-04-2016 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 VFU_RS06925 b89dda90e6e6070fb915c0da28b12045 445 PANTHER PTHR30288 1 444 3.7E-67 T 21-04-2016 VFU_RS03195 b1a974cc53596a307d831d7fba36c208 264 PANTHER PTHR31136 6 264 2.0E-128 T 21-04-2016 VFU_RS03195 b1a974cc53596a307d831d7fba36c208 264 Pfam PF07063 Domain of unknown function (DUF1338) 30 112 6.2E-19 T 21-04-2016 IPR009770 Domain of unknown function DUF1338 VFU_RS03195 b1a974cc53596a307d831d7fba36c208 264 Pfam PF07063 Domain of unknown function (DUF1338) 104 261 3.3E-30 T 21-04-2016 IPR009770 Domain of unknown function DUF1338 VFU_RS03195 b1a974cc53596a307d831d7fba36c208 264 PANTHER PTHR31136:SF2 6 264 2.0E-128 T 21-04-2016 VFU_RS03195 b1a974cc53596a307d831d7fba36c208 264 SMART SM01150 3 262 1.3E-115 T 21-04-2016 IPR009770 Domain of unknown function DUF1338 VFU_RS06970 ce9852ebaeb071e1ba37c749b84c8bc9 272 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 200 262 8.1E-11 T 21-04-2016 IPR001543 Surface presentation of antigen (SpoA) VFU_RS06970 ce9852ebaeb071e1ba37c749b84c8bc9 272 SUPERFAMILY SSF101801 197 264 6.28E-9 T 21-04-2016 IPR001543 Surface presentation of antigen (SpoA) VFU_RS06970 ce9852ebaeb071e1ba37c749b84c8bc9 272 Gene3D G3DSA:2.30.330.10 191 255 7.2E-6 T 21-04-2016 VFU_RS07725 682583543265bfe99dab1bfc9ca5cda5 267 PANTHER PTHR10108 1 190 2.5E-46 T 21-04-2016 VFU_RS07725 682583543265bfe99dab1bfc9ca5cda5 267 Gene3D G3DSA:3.40.50.150 19 222 5.7E-45 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS07725 682583543265bfe99dab1bfc9ca5cda5 267 PANTHER PTHR10108:SF855 1 190 2.5E-46 T 21-04-2016 VFU_RS07725 682583543265bfe99dab1bfc9ca5cda5 267 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 13 267 32.299 T 21-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 VFU_RS07725 682583543265bfe99dab1bfc9ca5cda5 267 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 21 266 6.1E-66 T 21-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 VFU_RS07725 682583543265bfe99dab1bfc9ca5cda5 267 SUPERFAMILY SSF53335 19 248 1.82E-46 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS07725 682583543265bfe99dab1bfc9ca5cda5 267 Pfam PF08241 Methyltransferase domain 57 147 5.1E-27 T 21-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 VFU_RS15235 557f077a39b422c06d3b2080acde8967 595 Pfam PF15864 Protein glycosylation ligase 174 199 2.1E-11 T 21-04-2016 IPR031726 Protein glycosylation ligase domain VFU_RS15235 557f077a39b422c06d3b2080acde8967 595 Pfam PF04932 O-Antigen ligase 222 366 3.9E-13 T 21-04-2016 IPR007016 O-antigen ligase-related VFU_RS15235 557f077a39b422c06d3b2080acde8967 595 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 388 577 3.4E-64 T 21-04-2016 IPR021797 Virulence factor membrane-bound polymerase, C-terminal VFU_RS05385 f972c24e861cb3341598b896cb1b8fe8 416 TIGRFAM TIGR03503 TIGR03503: TIGR03503 family protein 24 400 1.4E-141 T 21-04-2016 IPR020010 Conserved hypothetical protein CHP03503 VFU_RS11045 b5745349160c20243c5cf3a9d8893f4b 253 Gene3D G3DSA:2.30.330.10 184 251 1.3E-8 T 21-04-2016 VFU_RS11045 b5745349160c20243c5cf3a9d8893f4b 253 SUPERFAMILY SSF101801 185 245 7.06E-9 T 21-04-2016 IPR001543 Surface presentation of antigen (SpoA) VFU_RS11045 b5745349160c20243c5cf3a9d8893f4b 253 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 187 250 8.0E-12 T 21-04-2016 IPR001543 Surface presentation of antigen (SpoA) VFU_RS06500 0af773b2eade8895248699c35e65d588 316 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 1.4E-31 T 21-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 VFU_RS06500 0af773b2eade8895248699c35e65d588 316 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 316 6.2E-146 T 21-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 VFU_RS06500 0af773b2eade8895248699c35e65d588 316 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 316 73.021 T 21-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 VFU_RS06500 0af773b2eade8895248699c35e65d588 316 PANTHER PTHR18919:SF109 26 316 1.1E-130 T 21-04-2016 VFU_RS06500 0af773b2eade8895248699c35e65d588 316 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 227 315 9.7E-35 T 21-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 VFU_RS06500 0af773b2eade8895248699c35e65d588 316 Gene3D G3DSA:3.40.47.10 161 315 1.0E-51 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VFU_RS06500 0af773b2eade8895248699c35e65d588 316 PANTHER PTHR18919 26 316 1.1E-130 T 21-04-2016 VFU_RS06500 0af773b2eade8895248699c35e65d588 316 SUPERFAMILY SSF53901 3 315 2.25E-71 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VFU_RS06500 0af773b2eade8895248699c35e65d588 316 Gene3D G3DSA:3.40.47.10 1 160 9.9E-69 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VFU_RS13280 0f2fd21973a84fca6c0234d807ab32e6 162 Pfam PF01668 SmpB protein 14 77 1.5E-28 T 21-04-2016 IPR000037 SsrA-binding protein GO:0003723 VFU_RS13280 0f2fd21973a84fca6c0234d807ab32e6 162 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 15 139 4.0E-57 T 21-04-2016 IPR000037 SsrA-binding protein GO:0003723 VFU_RS13280 0f2fd21973a84fca6c0234d807ab32e6 162 Hamap MF_00023 SsrA-binding protein [smpB]. 1 162 70.405 T 21-04-2016 IPR000037 SsrA-binding protein GO:0003723 VFU_RS13280 0f2fd21973a84fca6c0234d807ab32e6 162 Gene3D G3DSA:2.40.280.10 14 134 1.3E-48 T 21-04-2016 IPR023620 Small protein B VFU_RS13280 0f2fd21973a84fca6c0234d807ab32e6 162 PANTHER PTHR30308 2 162 4.3E-81 T 21-04-2016 VFU_RS13280 0f2fd21973a84fca6c0234d807ab32e6 162 SUPERFAMILY SSF74982 9 139 6.54E-49 T 21-04-2016 IPR023620 Small protein B VFU_RS13280 0f2fd21973a84fca6c0234d807ab32e6 162 PANTHER PTHR30308:SF2 2 162 4.3E-81 T 21-04-2016 VFU_RS13280 0f2fd21973a84fca6c0234d807ab32e6 162 TIGRFAM TIGR00086 smpB: SsrA-binding protein 15 157 1.4E-53 T 21-04-2016 IPR000037 SsrA-binding protein GO:0003723 VFU_RS13280 0f2fd21973a84fca6c0234d807ab32e6 162 ProSitePatterns PS01317 SsrA-binding protein. 33 45 - T 21-04-2016 IPR020081 SsrA-binding protein, conserved site VFU_RS09065 f3ea3e8ac8400bcd0c2e63469ffb03b6 330 Pfam PF11279 Protein of unknown function (DUF3080) 27 327 3.0E-93 T 21-04-2016 IPR021431 Protein of unknown function DUF3080 VFU_RS05445 fade360b978b3d2713c58a9f1e728ef3 883 Pfam PF03174 Chitobiase/beta-hexosaminidase C-terminal domain 804 879 2.0E-28 T 21-04-2016 VFU_RS05445 fade360b978b3d2713c58a9f1e728ef3 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 432 449 7.3E-48 T 21-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VFU_RS05445 fade360b978b3d2713c58a9f1e728ef3 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 728 744 7.3E-48 T 21-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VFU_RS05445 fade360b978b3d2713c58a9f1e728ef3 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 292 312 7.3E-48 T 21-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VFU_RS05445 fade360b978b3d2713c58a9f1e728ef3 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 326 343 7.3E-48 T 21-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VFU_RS05445 fade360b978b3d2713c58a9f1e728ef3 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 499 517 7.3E-48 T 21-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VFU_RS05445 fade360b978b3d2713c58a9f1e728ef3 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 746 763 7.3E-48 T 21-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VFU_RS05445 fade360b978b3d2713c58a9f1e728ef3 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 355 376 7.3E-48 T 21-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VFU_RS05445 fade360b978b3d2713c58a9f1e728ef3 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 526 539 7.3E-48 T 21-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VFU_RS05445 fade360b978b3d2713c58a9f1e728ef3 883 SUPERFAMILY SSF55545 208 331 3.53E-24 T 21-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like VFU_RS05445 fade360b978b3d2713c58a9f1e728ef3 883 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 332 764 5.1E-108 T 21-04-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VFU_RS05445 fade360b978b3d2713c58a9f1e728ef3 883 PANTHER PTHR22600:SF12 567 774 2.1E-264 T 21-04-2016 VFU_RS05445 fade360b978b3d2713c58a9f1e728ef3 883 PANTHER PTHR22600:SF12 792 882 2.1E-264 T 21-04-2016 VFU_RS05445 fade360b978b3d2713c58a9f1e728ef3 883 PANTHER PTHR22600:SF12 415 456 2.1E-264 T 21-04-2016 VFU_RS05445 fade360b978b3d2713c58a9f1e728ef3 883 PANTHER PTHR22600:SF12 152 392 2.1E-264 T 21-04-2016 VFU_RS05445 fade360b978b3d2713c58a9f1e728ef3 883 PANTHER PTHR22600:SF12 474 538 2.1E-264 T 21-04-2016 VFU_RS05445 fade360b978b3d2713c58a9f1e728ef3 883 SUPERFAMILY SSF49384 26 197 1.32E-65 T 21-04-2016 IPR008965 Carbohydrate-binding domain GO:0030246 VFU_RS05445 fade360b978b3d2713c58a9f1e728ef3 883 SUPERFAMILY SSF51445 332 772 2.19E-142 T 21-04-2016 IPR017853 Glycoside hydrolase superfamily VFU_RS05445 fade360b978b3d2713c58a9f1e728ef3 883 SUPERFAMILY SSF81296 780 881 2.38E-36 T 21-04-2016 IPR014756 Immunoglobulin E-set VFU_RS05445 fade360b978b3d2713c58a9f1e728ef3 883 Gene3D G3DSA:3.20.20.80 330 832 5.5E-157 T 21-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VFU_RS05445 fade360b978b3d2713c58a9f1e728ef3 883 Gene3D G3DSA:2.60.40.290 26 167 9.6E-57 T 21-04-2016 IPR012291 Cellulose-binding family II/chitobiase, carbohydrate-binding domain GO:0004553|GO:0030247 VFU_RS05445 fade360b978b3d2713c58a9f1e728ef3 883 Pfam PF03173 Putative carbohydrate binding domain 35 193 2.6E-61 T 21-04-2016 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00349 VFU_RS05445 fade360b978b3d2713c58a9f1e728ef3 883 PANTHER PTHR22600 567 774 2.1E-264 T 21-04-2016 VFU_RS05445 fade360b978b3d2713c58a9f1e728ef3 883 PANTHER PTHR22600 792 882 2.1E-264 T 21-04-2016 VFU_RS05445 fade360b978b3d2713c58a9f1e728ef3 883 PANTHER PTHR22600 415 456 2.1E-264 T 21-04-2016 VFU_RS05445 fade360b978b3d2713c58a9f1e728ef3 883 PANTHER PTHR22600 152 392 2.1E-264 T 21-04-2016 VFU_RS05445 fade360b978b3d2713c58a9f1e728ef3 883 PANTHER PTHR22600 474 538 2.1E-264 T 21-04-2016 VFU_RS05445 fade360b978b3d2713c58a9f1e728ef3 883 Gene3D G3DSA:2.60.40.320 833 882 3.8E-28 T 21-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 VFU_RS05445 fade360b978b3d2713c58a9f1e728ef3 883 Gene3D G3DSA:3.30.379.10 206 329 2.1E-25 T 21-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like VFU_RS05445 fade360b978b3d2713c58a9f1e728ef3 883 SMART SM01081 34 195 4.9E-90 T 21-04-2016 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00349 VFU_RS05445 fade360b978b3d2713c58a9f1e728ef3 883 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 211 329 4.5E-15 T 21-04-2016 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VFU_RS12220 98413955dd43de97394f0a69f5a9d978 607 Pfam PF03237 Terminase-like family 176 583 4.4E-112 T 21-04-2016 IPR004921 Terminase, large subunit VFU_RS12220 98413955dd43de97394f0a69f5a9d978 607 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 6 64 2.5E-22 T 21-04-2016 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 VFU_RS06730 09fe8a29c61163e1bef504af1acc7493 147 Gene3D G3DSA:1.20.58.300 8 134 2.3E-26 T 21-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 VFU_RS06730 09fe8a29c61163e1bef504af1acc7493 147 SUPERFAMILY SSF140566 8 134 1.14E-21 T 21-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 VFU_RS06730 09fe8a29c61163e1bef504af1acc7493 147 Pfam PF05130 FlgN protein 10 123 1.5E-12 T 21-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 VFU_RS08305 846190efb5b2bbfa2cf3a620440133ff 310 SUPERFAMILY SSF51735 4 301 3.51E-37 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS08305 846190efb5b2bbfa2cf3a620440133ff 310 Gene3D G3DSA:3.40.50.720 4 243 2.3E-22 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS08305 846190efb5b2bbfa2cf3a620440133ff 310 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 212 6.9E-19 T 21-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 VFU_RS08305 846190efb5b2bbfa2cf3a620440133ff 310 PANTHER PTHR10366 3 306 1.3E-27 T 21-04-2016 VFU_RS20760 bca7fb8a48d386c28afa580890586a44 205 PRINTS PR01010 Flagellar P-ring protein signature 183 195 2.1E-58 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VFU_RS20760 bca7fb8a48d386c28afa580890586a44 205 PRINTS PR01010 Flagellar P-ring protein signature 35 52 2.1E-58 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VFU_RS20760 bca7fb8a48d386c28afa580890586a44 205 PRINTS PR01010 Flagellar P-ring protein signature 119 137 2.1E-58 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VFU_RS20760 bca7fb8a48d386c28afa580890586a44 205 PRINTS PR01010 Flagellar P-ring protein signature 13 32 2.1E-58 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VFU_RS20760 bca7fb8a48d386c28afa580890586a44 205 PRINTS PR01010 Flagellar P-ring protein signature 93 111 2.1E-58 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VFU_RS20760 bca7fb8a48d386c28afa580890586a44 205 PRINTS PR01010 Flagellar P-ring protein signature 52 70 2.1E-58 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VFU_RS20760 bca7fb8a48d386c28afa580890586a44 205 PANTHER PTHR30381 1 205 1.2E-121 T 21-04-2016 VFU_RS20760 bca7fb8a48d386c28afa580890586a44 205 PANTHER PTHR30381:SF1 1 205 1.2E-121 T 21-04-2016 VFU_RS20760 bca7fb8a48d386c28afa580890586a44 205 Pfam PF02119 Flagellar P-ring protein 1 204 5.3E-79 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VFU_RS11695 c9317aee60efd246b0716f92e0a63691 174 SUPERFAMILY SSF158442 17 163 4.05E-41 T 21-04-2016 VFU_RS11695 c9317aee60efd246b0716f92e0a63691 174 Gene3D G3DSA:1.20.1550.10 6 173 3.6E-60 T 21-04-2016 IPR023380 Disulphide bond formation protein DsbB-like domain VFU_RS11695 c9317aee60efd246b0716f92e0a63691 174 PANTHER PTHR36570:SF2 1 173 1.7E-79 T 21-04-2016 VFU_RS11695 c9317aee60efd246b0716f92e0a63691 174 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 9 170 21.652 T 21-04-2016 IPR022920 Disulphide bond formation protein DsbB VFU_RS11695 c9317aee60efd246b0716f92e0a63691 174 Pfam PF02600 Disulfide bond formation protein DsbB 14 162 4.2E-41 T 21-04-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 VFU_RS11695 c9317aee60efd246b0716f92e0a63691 174 PANTHER PTHR36570 1 173 1.7E-79 T 21-04-2016 VFU_RS10140 9cd3c156ae7a2a4e78f37653c56b5b29 167 PANTHER PTHR30399 1 163 2.9E-98 T 21-04-2016 VFU_RS10140 9cd3c156ae7a2a4e78f37653c56b5b29 167 PANTHER PTHR30399:SF4 1 163 2.9E-98 T 21-04-2016 VFU_RS10140 9cd3c156ae7a2a4e78f37653c56b5b29 167 Pfam PF01863 Protein of unknown function DUF45 97 150 3.8E-11 T 21-04-2016 IPR002725 Protein of unknown function DUF45 VFU_RS13695 f533b4e8e0ade01a4e5ebfaf19225680 222 TIGRFAM TIGR02451 anti_sig_ChrR: anti-sigma factor, putative, ChrR family 3 219 6.7E-78 T 21-04-2016 IPR012807 Anti-sigma factor ChrR, putative VFU_RS13695 f533b4e8e0ade01a4e5ebfaf19225680 222 SUPERFAMILY SSF51182 112 206 8.47E-17 T 21-04-2016 IPR011051 RmlC-like cupin domain VFU_RS13695 f533b4e8e0ade01a4e5ebfaf19225680 222 Gene3D G3DSA:2.60.120.10 113 206 1.7E-14 T 21-04-2016 IPR014710 RmlC-like jelly roll fold VFU_RS13695 f533b4e8e0ade01a4e5ebfaf19225680 222 Pfam PF13490 Putative zinc-finger 8 37 2.0E-5 T 21-04-2016 IPR027383 Putative zinc-finger VFU_RS13695 f533b4e8e0ade01a4e5ebfaf19225680 222 Pfam PF12973 ChrR Cupin-like domain 116 196 3.9E-14 T 21-04-2016 IPR025979 ChrR-like cupin domain VFU_RS06935 088d960f0a2fe97807d1100e0ffbd801 270 Pfam PF00563 EAL domain 31 250 2.5E-8 T 21-04-2016 IPR001633 EAL domain VFU_RS06935 088d960f0a2fe97807d1100e0ffbd801 270 SUPERFAMILY SSF141868 31 257 2.22E-8 T 21-04-2016 IPR001633 EAL domain VFU_RS05495 c1767bda8042accf61937980d3b41280 141 SUPERFAMILY SSF140566 1 113 1.7E-22 T 21-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 VFU_RS05495 c1767bda8042accf61937980d3b41280 141 Pfam PF05130 FlgN protein 2 131 6.1E-25 T 21-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 VFU_RS05495 c1767bda8042accf61937980d3b41280 141 Gene3D G3DSA:1.20.58.300 1 113 1.3E-22 T 21-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 VFU_RS00510 068a670e94aea4213afac9f61473c320 190 Pfam PF03167 Uracil DNA glycosylase superfamily 31 178 9.2E-26 T 21-04-2016 IPR005122 Uracil-DNA glycosylase-like VFU_RS00510 068a670e94aea4213afac9f61473c320 190 SUPERFAMILY SSF52141 2 188 2.52E-57 T 21-04-2016 IPR005122 Uracil-DNA glycosylase-like VFU_RS00510 068a670e94aea4213afac9f61473c320 190 SMART SM00987 26 182 2.6E-29 T 21-04-2016 VFU_RS00510 068a670e94aea4213afac9f61473c320 190 SMART SM00986 26 182 2.6E-29 T 21-04-2016 IPR005122 Uracil-DNA glycosylase-like VFU_RS00510 068a670e94aea4213afac9f61473c320 190 PANTHER PTHR42160:SF1 1 190 6.3E-89 T 21-04-2016 VFU_RS00510 068a670e94aea4213afac9f61473c320 190 Gene3D G3DSA:3.40.470.10 2 188 4.6E-45 T 21-04-2016 IPR005122 Uracil-DNA glycosylase-like VFU_RS00510 068a670e94aea4213afac9f61473c320 190 PANTHER PTHR42160 1 190 6.3E-89 T 21-04-2016 VFU_RS04685 756f1d451110835cda263297406aa440 136 Gene3D G3DSA:3.40.50.10220 34 133 2.2E-30 T 21-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS04685 756f1d451110835cda263297406aa440 136 Pfam PF03603 DNA polymerase III psi subunit 3 130 9.1E-35 T 21-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS04685 756f1d451110835cda263297406aa440 136 SUPERFAMILY SSF102220 33 133 2.09E-24 T 21-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS04685 756f1d451110835cda263297406aa440 136 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 37 128 7.0E-4 T 21-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS04685 756f1d451110835cda263297406aa440 136 PIRSF PIRSF029225 2 134 6.5E-37 T 21-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VFU_RS13255 48f225591ee6aa8d4590ba17a5f44d7c 294 Gene3D G3DSA:3.40.50.10330 4 151 3.9E-38 T 21-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 VFU_RS13255 48f225591ee6aa8d4590ba17a5f44d7c 294 Hamap MF_00361 NAD kinase [nadK]. 6 289 33.509 T 21-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 VFU_RS13255 48f225591ee6aa8d4590ba17a5f44d7c 294 Pfam PF01513 ATP-NAD kinase 8 273 5.7E-69 T 21-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 VFU_RS13255 48f225591ee6aa8d4590ba17a5f44d7c 294 PANTHER PTHR20275 2 290 1.1E-111 T 21-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 VFU_RS13255 48f225591ee6aa8d4590ba17a5f44d7c 294 SUPERFAMILY SSF111331 8 290 8.63E-93 T 21-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain VFU_RS13255 48f225591ee6aa8d4590ba17a5f44d7c 294 Gene3D G3DSA:2.60.200.30 152 262 1.5E-41 T 21-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 VFU_RS10850 07196e058f55c5300f0875c4010b38a8 419 PANTHER PTHR11958:SF54 1 408 5.2E-288 T 21-04-2016 VFU_RS10850 07196e058f55c5300f0875c4010b38a8 419 Gene3D G3DSA:1.10.3860.10 12 408 1.4E-111 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VFU_RS10850 07196e058f55c5300f0875c4010b38a8 419 SUPERFAMILY SSF118215 15 403 9.42E-108 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VFU_RS10850 07196e058f55c5300f0875c4010b38a8 419 Pfam PF00375 Sodium:dicarboxylate symporter family 15 403 2.3E-117 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VFU_RS10850 07196e058f55c5300f0875c4010b38a8 419 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 3.9E-53 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VFU_RS10850 07196e058f55c5300f0875c4010b38a8 419 PRINTS PR00173 Glutamate-aspartate symporter signature 230 249 3.9E-53 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VFU_RS10850 07196e058f55c5300f0875c4010b38a8 419 PRINTS PR00173 Glutamate-aspartate symporter signature 78 103 3.9E-53 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VFU_RS10850 07196e058f55c5300f0875c4010b38a8 419 PRINTS PR00173 Glutamate-aspartate symporter signature 48 68 3.9E-53 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VFU_RS10850 07196e058f55c5300f0875c4010b38a8 419 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 3.9E-53 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VFU_RS10850 07196e058f55c5300f0875c4010b38a8 419 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 3.9E-53 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VFU_RS10850 07196e058f55c5300f0875c4010b38a8 419 PRINTS PR00173 Glutamate-aspartate symporter signature 358 378 3.9E-53 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VFU_RS10850 07196e058f55c5300f0875c4010b38a8 419 PRINTS PR00173 Glutamate-aspartate symporter signature 147 169 3.9E-53 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VFU_RS10850 07196e058f55c5300f0875c4010b38a8 419 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 3.9E-53 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VFU_RS10850 07196e058f55c5300f0875c4010b38a8 419 PANTHER PTHR11958 1 408 5.2E-288 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VFU_RS10110 fbab6bd0ba559f888d0f703a05701b5e 382 Pfam PF12698 ABC-2 family transporter protein 22 368 1.6E-46 T 21-04-2016 VFU_RS10110 fbab6bd0ba559f888d0f703a05701b5e 382 Gene3D G3DSA:3.40.1710.10 42 111 6.1E-5 T 21-04-2016 VFU_RS10110 fbab6bd0ba559f888d0f703a05701b5e 382 PANTHER PTHR30294:SF2 1 372 5.3E-161 T 21-04-2016 VFU_RS10110 fbab6bd0ba559f888d0f703a05701b5e 382 PANTHER PTHR30294 1 372 5.3E-161 T 21-04-2016 VFU_RS08850 0fb612ccbb672323390720089cfead2e 323 Gene3D G3DSA:3.40.190.10 123 235 3.9E-5 T 21-04-2016 VFU_RS08850 0fb612ccbb672323390720089cfead2e 323 PANTHER PTHR30349:SF25 1 283 3.9E-113 T 21-04-2016 VFU_RS08850 0fb612ccbb672323390720089cfead2e 323 SUPERFAMILY SSF53850 36 265 9.05E-10 T 21-04-2016 VFU_RS08850 0fb612ccbb672323390720089cfead2e 323 PIRSF PIRSF017082 3 323 3.0E-84 T 21-04-2016 IPR005064 Bordetella uptake gene GO:0030288 VFU_RS08850 0fb612ccbb672323390720089cfead2e 323 PANTHER PTHR30349 1 283 3.9E-113 T 21-04-2016 VFU_RS08850 0fb612ccbb672323390720089cfead2e 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 62 320 2.0E-25 T 21-04-2016 IPR005064 Bordetella uptake gene GO:0030288 VFU_RS02550 1e43b108c415653f741b55f46a6cecff 632 Pfam PF05170 AsmA family 2 570 2.3E-115 T 21-04-2016 IPR007844 AsmA VFU_RS14405 832c39faff13648dae0a9e84ac97d039 521 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 11 515 2.5E-210 T 21-04-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 VFU_RS14405 832c39faff13648dae0a9e84ac97d039 521 PANTHER PTHR38761 1 521 1.5E-271 T 21-04-2016 VFU_RS14405 832c39faff13648dae0a9e84ac97d039 521 Pfam PF04262 Glutamate-cysteine ligase 13 378 1.5E-167 T 21-04-2016 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 VFU_RS14405 832c39faff13648dae0a9e84ac97d039 521 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 521 221.646 T 21-04-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 VFU_RS14405 832c39faff13648dae0a9e84ac97d039 521 SUPERFAMILY SSF55931 7 513 1.05E-201 T 21-04-2016 VFU_RS10960 325e7e78b57253de08c82b8073e0113f 91 Pfam PF04316 Anti-sigma-28 factor, FlgM 35 88 3.2E-8 T 21-04-2016 IPR031316 Anti-sigma-28 factor FlgM, C-terminal VFU_RS10960 325e7e78b57253de08c82b8073e0113f 91 SUPERFAMILY SSF101498 1 89 6.54E-6 T 21-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 VFU_RS16035 b68570330e964cc77e89d061288ad8ac 134 Gene3D G3DSA:3.40.50.980 54 133 1.3E-12 T 21-04-2016 VFU_RS16035 b68570330e964cc77e89d061288ad8ac 134 ProSitePatterns PS00455 Putative AMP-binding domain signature. 46 57 - T 21-04-2016 IPR020845 AMP-binding, conserved site VFU_RS16035 b68570330e964cc77e89d061288ad8ac 134 Gene3D G3DSA:3.40.50.980 19 53 2.7E-4 T 21-04-2016 VFU_RS16035 b68570330e964cc77e89d061288ad8ac 134 Pfam PF00501 AMP-binding enzyme 36 134 2.4E-12 T 21-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VFU_RS16035 b68570330e964cc77e89d061288ad8ac 134 SUPERFAMILY SSF56801 19 134 1.31E-15 T 21-04-2016 VFU_RS09355 4cbad65989575ab69c83e31fe112e410 92 SUPERFAMILY SSF50249 1 86 7.37E-25 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS09355 4cbad65989575ab69c83e31fe112e410 92 Pfam PF02303 Helix-destabilising protein 2 83 2.4E-31 T 21-04-2016 IPR003512 Bacteriophage M13, G5P, DNA-binding GO:0003697|GO:0006260 VFU_RS09355 4cbad65989575ab69c83e31fe112e410 92 Gene3D G3DSA:2.40.50.140 1 87 1.2E-37 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS09355 4cbad65989575ab69c83e31fe112e410 92 ProDom PD015272 DNA DNA-BINDING SINGLE-STRANDED PHAGE-RELATED HELIX-DESTABILIZING REPLICATION BINDING GPV 3D-STRUCTURE DIRECT 1 85 1.0E-23 T 21-04-2016 IPR003512 Bacteriophage M13, G5P, DNA-binding GO:0003697|GO:0006260 VFU_RS06065 6ea4aca1fd89505d196b088b6b2549c0 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.9E-8 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS06065 6ea4aca1fd89505d196b088b6b2549c0 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.9E-8 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS06065 6ea4aca1fd89505d196b088b6b2549c0 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.9E-8 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS06065 6ea4aca1fd89505d196b088b6b2549c0 298 Gene3D G3DSA:1.10.10.10 1 84 1.4E-28 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS06065 6ea4aca1fd89505d196b088b6b2549c0 298 PANTHER PTHR30419:SF8 1 290 4.8E-128 T 21-04-2016 VFU_RS06065 6ea4aca1fd89505d196b088b6b2549c0 298 Gene3D G3DSA:3.40.190.10 176 260 2.9E-25 T 21-04-2016 VFU_RS06065 6ea4aca1fd89505d196b088b6b2549c0 298 Gene3D G3DSA:3.40.190.10 89 175 1.4E-12 T 21-04-2016 VFU_RS06065 6ea4aca1fd89505d196b088b6b2549c0 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 1.2E-20 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VFU_RS06065 6ea4aca1fd89505d196b088b6b2549c0 298 SUPERFAMILY SSF53850 90 293 9.05E-38 T 21-04-2016 VFU_RS06065 6ea4aca1fd89505d196b088b6b2549c0 298 SUPERFAMILY SSF46785 1 86 3.89E-23 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS06065 6ea4aca1fd89505d196b088b6b2549c0 298 PANTHER PTHR30419 1 290 4.8E-128 T 21-04-2016 VFU_RS06065 6ea4aca1fd89505d196b088b6b2549c0 298 Pfam PF03466 LysR substrate binding domain 88 289 1.4E-41 T 21-04-2016 IPR005119 LysR, substrate-binding VFU_RS07270 6f46c1df6a6e278e7903aaca6d324269 356 PIRSF PIRSF001361 1 351 2.5E-145 T 21-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 VFU_RS07270 6f46c1df6a6e278e7903aaca6d324269 356 SUPERFAMILY SSF51569 9 345 2.3E-119 T 21-04-2016 VFU_RS07270 6f46c1df6a6e278e7903aaca6d324269 356 PANTHER PTHR21225 22 343 5.0E-177 T 21-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 VFU_RS07270 6f46c1df6a6e278e7903aaca6d324269 356 Pfam PF00793 DAHP synthetase I family 41 337 1.2E-86 T 21-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 VFU_RS07270 6f46c1df6a6e278e7903aaca6d324269 356 Gene3D G3DSA:3.20.20.70 11 347 5.7E-133 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VFU_RS07270 6f46c1df6a6e278e7903aaca6d324269 356 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 9 345 3.2E-135 T 21-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 VFU_RS12110 abb71b75fce6ae854967d1f0e6be83c4 231 SUPERFAMILY SSF69349 104 189 2.2E-6 T 21-04-2016 VFU_RS12110 abb71b75fce6ae854967d1f0e6be83c4 231 Gene3D G3DSA:2.40.50.230 70 110 3.0E-4 T 21-04-2016 IPR006531 Gp5 N-terminal VFU_RS12110 abb71b75fce6ae854967d1f0e6be83c4 231 SUPERFAMILY SSF69255 21 112 1.26E-9 T 21-04-2016 VFU_RS13155 9b439bead36bc9feb53b22d97b88fc47 215 Gene3D G3DSA:1.10.3680.10 70 212 4.8E-27 T 21-04-2016 IPR029024 TerB-like VFU_RS13155 9b439bead36bc9feb53b22d97b88fc47 215 Pfam PF04391 Protein of unknown function (DUF533) 37 212 5.2E-65 T 21-04-2016 IPR007486 Inner membrane protein YebE VFU_RS13155 9b439bead36bc9feb53b22d97b88fc47 215 SUPERFAMILY SSF158682 71 214 3.53E-25 T 21-04-2016 IPR029024 TerB-like VFU_RS13815 0f098a6fb82ef56cd8dcaa4c6c8b1d23 313 SUPERFAMILY SSF143865 2 231 2.22E-28 T 21-04-2016 VFU_RS13815 0f098a6fb82ef56cd8dcaa4c6c8b1d23 313 Pfam PF01544 CorA-like Mg2+ transporter protein 29 305 1.5E-49 T 21-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 VFU_RS13815 0f098a6fb82ef56cd8dcaa4c6c8b1d23 313 PANTHER PTHR21535 42 311 1.2E-25 T 21-04-2016 VFU_RS13815 0f098a6fb82ef56cd8dcaa4c6c8b1d23 313 SUPERFAMILY SSF144083 244 306 9.02E-14 T 21-04-2016 VFU_RS13815 0f098a6fb82ef56cd8dcaa4c6c8b1d23 313 Gene3D G3DSA:1.20.58.340 241 308 3.3E-17 T 21-04-2016 VFU_RS07005 f9e099d33421344c2d3faaa1489ee17d 448 SUPERFAMILY SSF52540 102 371 1.1E-92 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS07005 f9e099d33421344c2d3faaa1489ee17d 448 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 31 444 7.2E-189 T 21-04-2016 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VFU_RS07005 f9e099d33421344c2d3faaa1489ee17d 448 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 12 445 1.4E-165 T 21-04-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VFU_RS07005 f9e099d33421344c2d3faaa1489ee17d 448 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 356 365 - T 21-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VFU_RS07005 f9e099d33421344c2d3faaa1489ee17d 448 Gene3D G3DSA:3.40.50.300 131 413 6.1E-89 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS07005 f9e099d33421344c2d3faaa1489ee17d 448 PANTHER PTHR15184 7 447 8.0E-213 T 21-04-2016 VFU_RS07005 f9e099d33421344c2d3faaa1489ee17d 448 SMART SM00382 166 349 0.0018 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS07005 f9e099d33421344c2d3faaa1489ee17d 448 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 154 365 1.3E-71 T 21-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VFU_RS07005 f9e099d33421344c2d3faaa1489ee17d 448 PANTHER PTHR15184:SF9 7 447 8.0E-213 T 21-04-2016 IPR032463 ATPase, type III secretion system, FliI GO:0016887|GO:0030257|GO:0044780 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VFU_RS09360 fe462541a3a6be82c95e1a064b855f18 431 Pfam PF05144 Phage replication protein CRI 2 277 1.8E-75 T 21-04-2016 IPR022686 Replication-associated protein G2P, N-terminal GO:0006260 VFU_RS09360 fe462541a3a6be82c95e1a064b855f18 431 Pfam PF05155 Phage X family 322 413 1.3E-32 T 21-04-2016 IPR022688 Replication-associated protein G2P, C-terminal GO:0006260 VFU_RS09360 fe462541a3a6be82c95e1a064b855f18 431 TIGRFAM TIGR01629 rep_II_X: phage/plasmid replication protein, gene II/X family 2 412 1.2E-112 T 21-04-2016 IPR006516 Replication-associated protein G2P GO:0006260 VFU_RS11650 9dbf7ef0131e0a5d30ce096e5d86838b 284 Pfam PF01636 Phosphotransferase enzyme family 33 219 5.2E-11 T 21-04-2016 IPR002575 Aminoglycoside phosphotransferase VFU_RS11650 9dbf7ef0131e0a5d30ce096e5d86838b 284 SUPERFAMILY SSF56112 30 269 6.41E-32 T 21-04-2016 IPR011009 Protein kinase-like domain VFU_RS11650 9dbf7ef0131e0a5d30ce096e5d86838b 284 Gene3D G3DSA:3.90.1200.10 83 265 1.4E-12 T 21-04-2016 VFU_RS03505 dbcf39d87935a8318b6e1c320816b9b9 220 Pfam PF10986 Protein of unknown function (DUF2796) 29 139 1.2E-30 T 21-04-2016 IPR021253 Protein of unknown function DUF2796 VFU_RS03505 dbcf39d87935a8318b6e1c320816b9b9 220 Pfam PF10986 Protein of unknown function (DUF2796) 133 216 1.6E-19 T 21-04-2016 IPR021253 Protein of unknown function DUF2796 VFU_RS01930 71028090469856933d7edc92954f2652 68 Gene3D G3DSA:3.10.20.30 3 68 9.4E-20 T 21-04-2016 IPR012675 Beta-grasp domain VFU_RS01930 71028090469856933d7edc92954f2652 68 PANTHER PTHR34472:SF1 1 68 1.2E-18 T 21-04-2016 VFU_RS01930 71028090469856933d7edc92954f2652 68 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 5 68 2.4E-15 T 21-04-2016 IPR010035 ThiS, thiamine-biosynthesis VFU_RS01930 71028090469856933d7edc92954f2652 68 Pfam PF02597 ThiS family 7 68 6.5E-14 T 21-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 VFU_RS01930 71028090469856933d7edc92954f2652 68 SUPERFAMILY SSF54285 3 68 6.83E-15 T 21-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VFU_RS01930 71028090469856933d7edc92954f2652 68 PANTHER PTHR34472 1 68 1.2E-18 T 21-04-2016 VFU_RS07235 dd28970f44edca5158a804b86e583e7a 640 Pfam PF02254 TrkA-N domain 422 536 2.5E-24 T 21-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VFU_RS07235 dd28970f44edca5158a804b86e583e7a 640 Gene3D G3DSA:3.40.50.720 417 550 7.2E-35 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS07235 dd28970f44edca5158a804b86e583e7a 640 Pfam PF00999 Sodium/hydrogen exchanger family 10 390 9.3E-58 T 21-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VFU_RS07235 dd28970f44edca5158a804b86e583e7a 640 PANTHER PTHR16254:SF6 5 576 7.6E-192 T 21-04-2016 VFU_RS07235 dd28970f44edca5158a804b86e583e7a 640 SUPERFAMILY SSF51735 419 559 1.02E-31 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS07235 dd28970f44edca5158a804b86e583e7a 640 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 12 301 1.5E-75 T 21-04-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 VFU_RS07235 dd28970f44edca5158a804b86e583e7a 640 PANTHER PTHR16254 5 576 7.6E-192 T 21-04-2016 VFU_RS09475 b6b4a13e03053fcf09fa0b5141a11a1a 157 Pfam PF13185 GAF domain 44 146 2.8E-10 T 21-04-2016 IPR003018 GAF domain GO:0005515 VFU_RS09475 b6b4a13e03053fcf09fa0b5141a11a1a 157 PANTHER PTHR21021 2 142 1.1E-53 T 21-04-2016 VFU_RS09475 b6b4a13e03053fcf09fa0b5141a11a1a 157 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 89 106 - T 21-04-2016 IPR000614 Free Met sulfoxide reductase conserved site VFU_RS09475 b6b4a13e03053fcf09fa0b5141a11a1a 157 Gene3D G3DSA:3.30.450.40 4 150 1.3E-47 T 21-04-2016 IPR029016 GAF domain-like VFU_RS09475 b6b4a13e03053fcf09fa0b5141a11a1a 157 SUPERFAMILY SSF55781 4 144 1.54E-38 T 21-04-2016 IPR029016 GAF domain-like VFU_RS02620 4e5532948e03955bc7a36c73e9704c3b 169 Pfam PF04612 Type II secretion system (T2SS), protein M 10 166 5.8E-52 T 21-04-2016 IPR007690 Type II secretion system, protein M GO:0006858 VFU_RS02620 4e5532948e03955bc7a36c73e9704c3b 169 SUPERFAMILY SSF103054 90 167 1.83E-22 T 21-04-2016 IPR023229 Type II secretion system protein M, periplasmic domain VFU_RS02620 4e5532948e03955bc7a36c73e9704c3b 169 Gene3D G3DSA:3.30.1360.100 89 167 9.4E-33 T 21-04-2016 IPR023229 Type II secretion system protein M, periplasmic domain VFU_RS02620 4e5532948e03955bc7a36c73e9704c3b 169 PIRSF PIRSF006291 7 167 3.1E-41 T 21-04-2016 IPR007690 Type II secretion system, protein M GO:0006858 VFU_RS10020 ed72b67ae796127fca0846198193e843 151 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 5 139 2.5E-33 T 21-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 VFU_RS10020 ed72b67ae796127fca0846198193e843 151 TIGRFAM TIGR00142 hycI: hydrogenase maturation peptidase HycI 4 146 1.3E-46 T 21-04-2016 IPR004420 Peptidase A31, hydrogenase maturation protease HycI GO:0008233 VFU_RS10020 ed72b67ae796127fca0846198193e843 151 PANTHER PTHR30302 1 148 1.1E-38 T 21-04-2016 VFU_RS10020 ed72b67ae796127fca0846198193e843 151 SUPERFAMILY SSF53163 5 146 2.62E-32 T 21-04-2016 IPR023430 Peptidase HybD-like domain VFU_RS10020 ed72b67ae796127fca0846198193e843 151 PANTHER PTHR30302:SF4 1 148 1.1E-38 T 21-04-2016 VFU_RS10020 ed72b67ae796127fca0846198193e843 151 PRINTS PR00446 Hydrogen uptake protein signature 16 27 1.4E-6 T 21-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 VFU_RS10020 ed72b67ae796127fca0846198193e843 151 PRINTS PR00446 Hydrogen uptake protein signature 67 83 1.4E-6 T 21-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 VFU_RS10020 ed72b67ae796127fca0846198193e843 151 PRINTS PR00446 Hydrogen uptake protein signature 56 66 1.4E-6 T 21-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 VFU_RS10020 ed72b67ae796127fca0846198193e843 151 PRINTS PR00446 Hydrogen uptake protein signature 4 16 1.4E-6 T 21-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 VFU_RS10020 ed72b67ae796127fca0846198193e843 151 Gene3D G3DSA:3.40.50.1450 5 139 1.0E-24 T 21-04-2016 IPR023430 Peptidase HybD-like domain VFU_RS10020 ed72b67ae796127fca0846198193e843 151 Pfam PF01750 Hydrogenase maturation protease 33 136 7.0E-22 T 21-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 VFU_RS00795 110d0acd2fb24a052017f01161e93c47 346 Pfam PF00534 Glycosyl transferases group 1 164 314 9.2E-29 T 21-04-2016 IPR001296 Glycosyl transferase, family 1 VFU_RS00795 110d0acd2fb24a052017f01161e93c47 346 Pfam PF13439 Glycosyltransferase Family 4 13 147 4.7E-8 T 21-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain VFU_RS00795 110d0acd2fb24a052017f01161e93c47 346 Gene3D G3DSA:3.40.50.2000 169 314 1.7E-26 T 21-04-2016 VFU_RS00795 110d0acd2fb24a052017f01161e93c47 346 PANTHER PTHR12526 1 342 3.2E-48 T 21-04-2016 VFU_RS00795 110d0acd2fb24a052017f01161e93c47 346 SUPERFAMILY SSF53756 2 341 9.42E-63 T 21-04-2016 VFU_RS08245 0eed6568046e8c64e94a350c33897f53 147 Pfam PF03724 META domain 33 139 2.0E-27 T 21-04-2016 IPR005184 Domain of unknown function DUF306, Meta/HslJ VFU_RS08245 0eed6568046e8c64e94a350c33897f53 147 PANTHER PTHR35535 4 147 8.8E-37 T 21-04-2016 VFU_RS08245 0eed6568046e8c64e94a350c33897f53 147 PANTHER PTHR35535:SF1 4 147 8.8E-37 T 21-04-2016 VFU_RS08565 5dbc8a05f0f5cedf20a1bbaa7b920b56 182 Pfam PF05951 Bacterial protein of unknown function (DUF882) 31 179 3.3E-70 T 21-04-2016 IPR010275 Protein of unknown function DUF882 VFU_RS08565 5dbc8a05f0f5cedf20a1bbaa7b920b56 182 Gene3D G3DSA:3.30.1380.10 52 181 3.7E-33 T 21-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain VFU_RS08565 5dbc8a05f0f5cedf20a1bbaa7b920b56 182 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 28 1.5E-5 T 21-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VFU_RS08565 5dbc8a05f0f5cedf20a1bbaa7b920b56 182 PANTHER PTHR37425 4 182 5.8E-62 T 21-04-2016 VFU_RS08565 5dbc8a05f0f5cedf20a1bbaa7b920b56 182 SUPERFAMILY SSF55166 52 181 6.02E-35 T 21-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain VFU_RS01580 7c6aed2191e00e9df5393aa4295a2266 184 PANTHER PTHR12608 1 184 7.0E-40 T 21-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 VFU_RS01580 7c6aed2191e00e9df5393aa4295a2266 184 Pfam PF01169 Uncharacterized protein family UPF0016 103 177 6.1E-20 T 21-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 VFU_RS01580 7c6aed2191e00e9df5393aa4295a2266 184 Pfam PF01169 Uncharacterized protein family UPF0016 7 80 1.0E-20 T 21-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 VFU_RS00615 e668f195f504e31d12d9c66b52fceddc 358 PANTHER PTHR34069:SF2 5 352 3.7E-77 T 21-04-2016 VFU_RS00615 e668f195f504e31d12d9c66b52fceddc 358 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 255 344 1.1E-23 T 21-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 VFU_RS00615 e668f195f504e31d12d9c66b52fceddc 358 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 117 193 1.0E-21 T 21-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 VFU_RS00615 e668f195f504e31d12d9c66b52fceddc 358 Gene3D G3DSA:3.40.47.10 4 171 8.8E-38 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VFU_RS00615 e668f195f504e31d12d9c66b52fceddc 358 SUPERFAMILY SSF53901 7 344 7.13E-45 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VFU_RS00615 e668f195f504e31d12d9c66b52fceddc 358 Gene3D G3DSA:3.40.47.10 172 194 1.4E-42 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VFU_RS00615 e668f195f504e31d12d9c66b52fceddc 358 Gene3D G3DSA:3.40.47.10 231 346 1.4E-42 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VFU_RS00615 e668f195f504e31d12d9c66b52fceddc 358 PANTHER PTHR34069 5 352 3.7E-77 T 21-04-2016 VFU_RS08155 4b1fd9cc3453f009e92525f53aab4ec0 221 PANTHER PTHR31088:SF7 2 221 2.3E-113 T 21-04-2016 VFU_RS08155 4b1fd9cc3453f009e92525f53aab4ec0 221 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 220 7.6E-95 T 21-04-2016 IPR014319 Phage shock protein, PspA VFU_RS08155 4b1fd9cc3453f009e92525f53aab4ec0 221 PANTHER PTHR31088 2 221 2.3E-113 T 21-04-2016 VFU_RS08155 4b1fd9cc3453f009e92525f53aab4ec0 221 Pfam PF04012 PspA/IM30 family 2 218 6.1E-61 T 21-04-2016 IPR007157 PspA/IM30 VFU_RS02870 4a0165a739dd997a7e3671a0ecdbd451 80 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 18.004 T 21-04-2016 IPR009252 Cell division protein ZapB GO:0000917|GO:0005737|GO:0043093 VFU_RS02870 4a0165a739dd997a7e3671a0ecdbd451 80 Pfam PF06005 Protein of unknown function (DUF904) 1 77 1.5E-25 T 21-04-2016 IPR009252 Cell division protein ZapB GO:0000917|GO:0005737|GO:0043093 VFU_RS08010 b8657d31237659bc576343e82234255b 502 Pfam PF14400 Inactive transglutaminase fused to 7 transmembrane helices 25 183 1.5E-56 T 21-04-2016 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices VFU_RS08010 b8657d31237659bc576343e82234255b 502 Pfam PF14402 7 transmembrane helices usually fused to an inactive transglutaminase 190 498 1.4E-135 T 21-04-2016 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase VFU_RS09080 99a86967edca2f204cfc2ab8f8480104 67 PIRSF PIRSF037225 1 65 5.7E-26 T 21-04-2016 IPR017143 Uncharacterised conserved protein UCP037225 VFU_RS09080 99a86967edca2f204cfc2ab8f8480104 67 Pfam PF14255 Cysteine-rich CPXCG 9 59 2.1E-20 T 21-04-2016 IPR025990 Cysteine-rich CPXCG protein VFU_RS13955 aa4fc506349c46bec3b644c146326640 782 Pfam PF07238 PilZ domain 144 248 1.2E-7 T 21-04-2016 IPR009875 PilZ domain GO:0035438 VFU_RS13955 aa4fc506349c46bec3b644c146326640 782 Pfam PF07238 PilZ domain 470 553 2.5E-10 T 21-04-2016 IPR009875 PilZ domain GO:0035438 VFU_RS13955 aa4fc506349c46bec3b644c146326640 782 SUPERFAMILY SSF141371 466 554 1.57E-5 T 21-04-2016 VFU_RS11880 a1c2c6e059b29a4c08c81260861cf004 310 PANTHER PTHR13773:SF11 28 307 2.7E-138 T 21-04-2016 VFU_RS11880 a1c2c6e059b29a4c08c81260861cf004 310 Pfam PF01148 Cytidylyltransferase family 42 307 2.0E-68 T 21-04-2016 VFU_RS11880 a1c2c6e059b29a4c08c81260861cf004 310 PANTHER PTHR13773 28 307 2.7E-138 T 21-04-2016 VFU_RS11880 a1c2c6e059b29a4c08c81260861cf004 310 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 266 292 - T 21-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 VFU_RS00040 2f0ba57893e04c6ca834bdc993560db5 261 Gene3D G3DSA:1.10.287.460 37 139 6.5E-37 T 21-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 VFU_RS00040 2f0ba57893e04c6ca834bdc993560db5 261 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 36 157 3.1E-34 T 21-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 VFU_RS00040 2f0ba57893e04c6ca834bdc993560db5 261 SUPERFAMILY SSF54534 49 253 1.37E-62 T 21-04-2016 VFU_RS00040 2f0ba57893e04c6ca834bdc993560db5 261 PANTHER PTHR10516 135 256 1.3E-51 T 21-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type VFU_RS00040 2f0ba57893e04c6ca834bdc993560db5 261 PANTHER PTHR10516 2 35 1.3E-51 T 21-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type VFU_RS00040 2f0ba57893e04c6ca834bdc993560db5 261 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 165 251 3.3E-30 T 21-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 VFU_RS00040 2f0ba57893e04c6ca834bdc993560db5 261 Gene3D G3DSA:3.10.50.40 140 254 1.9E-46 T 21-04-2016 VFU_RS08800 37da1bbbdba19eb98606c698a3f1bbf1 67 PANTHER PTHR40691 1 66 1.6E-26 T 21-04-2016 VFU_RS08800 37da1bbbdba19eb98606c698a3f1bbf1 67 Pfam PF04400 Protein of unknown function (DUF539) 21 63 1.9E-22 T 21-04-2016 IPR007495 (Na+)-NQR maturation factor NqrM VFU_RS00725 949fc79b90a41556a87021cd15245593 751 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 44 735 1.1E-272 T 21-04-2016 IPR010344 Exopolysaccharide biosynthesis protein YbjH VFU_RS07920 e2bd5d1d293f5cee54be2ad807096e80 82 Pfam PF10692 Protein of unknown function (DUF2498) 4 80 9.4E-41 T 21-04-2016 IPR019633 Protein of unknown function DUF2498 VFU_RS11485 42835af909b6952922938caea89bc576 53 Pfam PF10689 Protein of unknown function (DUF2496) 7 49 1.8E-23 T 21-04-2016 IPR019630 Protein of unknown function DUF2496, YbaM-related VFU_RS05715 432d8803d5cb1311d457f4ab4bcc2385 269 Pfam PF13371 Tetratricopeptide repeat 187 259 5.3E-25 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VFU_RS05715 432d8803d5cb1311d457f4ab4bcc2385 269 Pfam PF13369 Transglutaminase-like superfamily 34 184 5.3E-43 T 21-04-2016 IPR032698 Protein SirB1, N-terminal VFU_RS05715 432d8803d5cb1311d457f4ab4bcc2385 269 PANTHER PTHR31350 10 262 1.0E-44 T 21-04-2016 VFU_RS05715 432d8803d5cb1311d457f4ab4bcc2385 269 SUPERFAMILY SSF48452 190 256 1.38E-7 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VFU_RS05715 432d8803d5cb1311d457f4ab4bcc2385 269 Gene3D G3DSA:1.25.40.10 183 251 2.3E-7 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VFU_RS05540 2e3326a74423e6b6d481013433a956be 249 PANTHER PTHR30435:SF18 1 249 7.6E-112 T 21-04-2016 VFU_RS05540 2e3326a74423e6b6d481013433a956be 249 PANTHER PTHR30435 1 249 7.6E-112 T 21-04-2016 VFU_RS05540 2e3326a74423e6b6d481013433a956be 249 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 1.3E-33 T 21-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G VFU_RS05540 2e3326a74423e6b6d481013433a956be 249 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 173 242 5.5E-22 T 21-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VFU_RS05540 2e3326a74423e6b6d481013433a956be 249 Pfam PF00460 Flagella basal body rod protein 8 35 2.0E-5 T 21-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VFU_RS05540 2e3326a74423e6b6d481013433a956be 249 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 6 226 4.2E-55 T 21-04-2016 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 VFU_RS05540 2e3326a74423e6b6d481013433a956be 249 SUPERFAMILY SSF117143 77 207 2.35E-17 T 21-04-2016 VFU_RS05205 9daa1dad7c6ff10724a506a94228d4c7 218 Gene3D G3DSA:2.40.30.20 5 104 7.7E-31 T 21-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VFU_RS05205 9daa1dad7c6ff10724a506a94228d4c7 218 Gene3D G3DSA:2.40.30.20 105 194 2.9E-31 T 21-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VFU_RS05205 9daa1dad7c6ff10724a506a94228d4c7 218 PANTHER PTHR21098 1 218 7.3E-104 T 21-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VFU_RS05205 9daa1dad7c6ff10724a506a94228d4c7 218 SUPERFAMILY SSF63380 93 196 5.87E-32 T 21-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 VFU_RS05205 9daa1dad7c6ff10724a506a94228d4c7 218 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 201 6.3E-67 T 21-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VFU_RS05205 9daa1dad7c6ff10724a506a94228d4c7 218 SUPERFAMILY SSF63380 1 89 6.29E-25 T 21-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 VFU_RS05205 9daa1dad7c6ff10724a506a94228d4c7 218 Pfam PF00677 Lumazine binding domain 100 184 1.3E-20 T 21-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VFU_RS05205 9daa1dad7c6ff10724a506a94228d4c7 218 Pfam PF00677 Lumazine binding domain 3 87 3.3E-20 T 21-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VFU_RS05205 9daa1dad7c6ff10724a506a94228d4c7 218 PIRSF PIRSF000498 1 212 9.0E-80 T 21-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VFU_RS09105 11df9c85789fd60dbc374c0f1c70695b 263 PANTHER PTHR11863 50 261 3.2E-37 T 21-04-2016 VFU_RS09105 11df9c85789fd60dbc374c0f1c70695b 263 PANTHER PTHR11863:SF2 50 261 3.2E-37 T 21-04-2016 VFU_RS09105 11df9c85789fd60dbc374c0f1c70695b 263 Pfam PF04116 Fatty acid hydroxylase superfamily 88 225 2.9E-25 T 21-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 VFU_RS06630 95e07d7f040abd9ad98e9a42b1c63cb8 83 Pfam PF11212 Protein of unknown function (DUF2999) 1 82 9.9E-44 T 21-04-2016 IPR021376 Protein of unknown function DUF2999 VFU_RS04480 2e38179f3379fd5818031f0ed2f60846 341 PANTHER PTHR30465 1 308 3.6E-105 T 21-04-2016 VFU_RS04480 2e38179f3379fd5818031f0ed2f60846 341 SUPERFAMILY SSF161098 96 278 1.7E-18 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS04480 2e38179f3379fd5818031f0ed2f60846 341 Gene3D G3DSA:1.10.3720.10 93 296 6.9E-19 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS04480 2e38179f3379fd5818031f0ed2f60846 341 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 5 39 8.5E-7 T 21-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VFU_RS04480 2e38179f3379fd5818031f0ed2f60846 341 PANTHER PTHR30465:SF2 1 308 3.6E-105 T 21-04-2016 VFU_RS04480 2e38179f3379fd5818031f0ed2f60846 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 300 2.6E-18 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS03855 153de986bccb7006be3d9290f363846f 897 SUPERFAMILY SSF56672 360 599 3.34E-17 T 21-04-2016 VFU_RS07310 278e2c1f65cb4e4dfb3a4e7f1f69cfe4 92 SUPERFAMILY SSF47336 5 79 1.02E-9 T 21-04-2016 IPR009081 Phosphopantetheine binding ACP domain VFU_RS07310 278e2c1f65cb4e4dfb3a4e7f1f69cfe4 92 ProSitePatterns PS00012 Phosphopantetheine attachment site. 31 46 - T 21-04-2016 IPR006162 Phosphopantetheine attachment site VFU_RS07310 278e2c1f65cb4e4dfb3a4e7f1f69cfe4 92 Gene3D G3DSA:1.10.1200.10 6 75 2.0E-6 T 21-04-2016 IPR009081 Phosphopantetheine binding ACP domain VFU_RS07310 278e2c1f65cb4e4dfb3a4e7f1f69cfe4 92 Pfam PF00550 Phosphopantetheine attachment site 8 53 6.0E-6 T 21-04-2016 IPR009081 Phosphopantetheine binding ACP domain VFU_RS10170 f31da70c2b44780a2887e971b13e6a2a 191 Gene3D G3DSA:1.10.3420.10 12 127 1.8E-17 T 21-04-2016 IPR023292 NTP pyrophosphohydrolase-like domain VFU_RS10170 f31da70c2b44780a2887e971b13e6a2a 191 Gene3D G3DSA:1.10.3420.10 166 189 1.8E-17 T 21-04-2016 IPR023292 NTP pyrophosphohydrolase-like domain VFU_RS10170 f31da70c2b44780a2887e971b13e6a2a 191 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 19 82 7.3E-8 T 21-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 VFU_RS14755 5db48d126387ae3e06264a7617cda09e 208 PANTHER PTHR30086:SF0 1 208 1.1E-93 T 21-04-2016 VFU_RS14755 5db48d126387ae3e06264a7617cda09e 208 Pfam PF01810 LysE type translocator 15 199 1.5E-41 T 21-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VFU_RS14755 5db48d126387ae3e06264a7617cda09e 208 PANTHER PTHR30086 1 208 1.1E-93 T 21-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VFU_RS14535 71c7b27b8e910e7908e2d5251be19a44 94 PANTHER PTHR37485 2 93 2.9E-43 T 21-04-2016 VFU_RS14535 71c7b27b8e910e7908e2d5251be19a44 94 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 36.124 T 21-04-2016 IPR023081 Cell division protein FtsB VFU_RS14535 71c7b27b8e910e7908e2d5251be19a44 94 Pfam PF04977 Septum formation initiator 11 89 3.3E-26 T 21-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 VFU_RS14535 71c7b27b8e910e7908e2d5251be19a44 94 PANTHER PTHR37485:SF1 2 93 2.9E-43 T 21-04-2016 VFU_RS15255 39c508c382ea514fa8c40d4737b2a3e4 447 Pfam PF00999 Sodium/hydrogen exchanger family 18 416 8.5E-56 T 21-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VFU_RS15255 39c508c382ea514fa8c40d4737b2a3e4 447 PANTHER PTHR10110 8 439 3.4E-98 T 21-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 VFU_RS15255 39c508c382ea514fa8c40d4737b2a3e4 447 PANTHER PTHR10110:SF86 8 439 3.4E-98 T 21-04-2016 VFU_RS09850 7b623d92f418bf0b973a933a053bda60 201 Pfam PF00578 AhpC/TSA family 58 164 1.7E-5 T 21-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 VFU_RS09850 7b623d92f418bf0b973a933a053bda60 201 SUPERFAMILY SSF52833 47 171 1.15E-16 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS09850 7b623d92f418bf0b973a933a053bda60 201 Gene3D G3DSA:3.40.30.10 15 178 3.9E-16 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS02110 70873719524ff0dad6e34bc2dd1c66d3 510 PANTHER PTHR30563 1 510 7.5E-134 T 21-04-2016 VFU_RS02110 70873719524ff0dad6e34bc2dd1c66d3 510 Pfam PF02646 RmuC family 181 477 1.6E-104 T 21-04-2016 IPR003798 DNA recombination RmuC VFU_RS10935 01c91e83c48a37fa6a311a9c3e078d19 280 Pfam PF00669 Bacterial flagellin N-terminal helical region 6 139 3.1E-39 T 21-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VFU_RS10935 01c91e83c48a37fa6a311a9c3e078d19 280 SUPERFAMILY SSF64518 1 279 3.4E-73 T 21-04-2016 VFU_RS10935 01c91e83c48a37fa6a311a9c3e078d19 280 Pfam PF00700 Bacterial flagellin C-terminal helical region 194 279 3.6E-20 T 21-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VFU_RS10935 01c91e83c48a37fa6a311a9c3e078d19 280 PRINTS PR00207 Flagellin signature 76 95 1.7E-20 T 21-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VFU_RS10935 01c91e83c48a37fa6a311a9c3e078d19 280 PRINTS PR00207 Flagellin signature 37 54 1.7E-20 T 21-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VFU_RS10935 01c91e83c48a37fa6a311a9c3e078d19 280 PRINTS PR00207 Flagellin signature 111 134 1.7E-20 T 21-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VFU_RS10935 01c91e83c48a37fa6a311a9c3e078d19 280 Gene3D G3DSA:1.20.1330.10 55 235 1.2E-44 T 21-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VFU_RS10935 01c91e83c48a37fa6a311a9c3e078d19 280 PANTHER PTHR30244 2 279 1.1E-86 T 21-04-2016 VFU_RS10935 01c91e83c48a37fa6a311a9c3e078d19 280 PANTHER PTHR30244:SF1 2 279 1.1E-86 T 21-04-2016 VFU_RS01435 3decb762a8e28ef8debbcbc04f17a459 158 PANTHER PTHR38692:SF1 1 158 4.1E-83 T 21-04-2016 VFU_RS01435 3decb762a8e28ef8debbcbc04f17a459 158 Pfam PF04361 Protein of unknown function (DUF494) 2 158 3.4E-60 T 21-04-2016 IPR007456 Smg VFU_RS01435 3decb762a8e28ef8debbcbc04f17a459 158 Hamap MF_00598 Protein Smg [smg]. 2 158 33.256 T 21-04-2016 IPR007456 Smg VFU_RS01435 3decb762a8e28ef8debbcbc04f17a459 158 PANTHER PTHR38692 1 158 4.1E-83 T 21-04-2016 VFU_RS00500 a0aa4323ac698f57cb5d220b866e7f59 201 Pfam PF04222 Protein of unknown function (DUF416) 12 200 8.0E-77 T 21-04-2016 IPR007338 Protein of unknown function DUF416 VFU_RS00500 a0aa4323ac698f57cb5d220b866e7f59 201 Gene3D G3DSA:1.20.1590.10 8 201 5.0E-83 T 21-04-2016 IPR023381 YP001051499.1-like domain VFU_RS15380 42121fd125722855b75de4e218643a64 62 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 52 2.5E-13 T 21-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain VFU_RS15380 42121fd125722855b75de4e218643a64 62 PANTHER PTHR37424 2 59 1.1E-17 T 21-04-2016 VFU_RS15380 42121fd125722855b75de4e218643a64 62 PANTHER PTHR37424:SF1 2 59 1.1E-17 T 21-04-2016 VFU_RS14205 43ba05f7bfa42882d309a7070c47e2d4 305 Gene3D G3DSA:3.30.230.20 3 126 1.9E-46 T 21-04-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 VFU_RS14205 43ba05f7bfa42882d309a7070c47e2d4 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 298 2.8E-141 T 21-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 VFU_RS14205 43ba05f7bfa42882d309a7070c47e2d4 305 Gene3D G3DSA:3.30.1700.10 129 283 9.0E-61 T 21-04-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 VFU_RS14205 43ba05f7bfa42882d309a7070c47e2d4 305 SUPERFAMILY SSF54211 3 125 3.11E-42 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VFU_RS14205 43ba05f7bfa42882d309a7070c47e2d4 305 PANTHER PTHR33694:SF1 1 305 7.4E-141 T 21-04-2016 VFU_RS14205 43ba05f7bfa42882d309a7070c47e2d4 305 SUPERFAMILY SSF54211 134 278 4.55E-52 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VFU_RS14205 43ba05f7bfa42882d309a7070c47e2d4 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 1.5E-107 T 21-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 VFU_RS14205 43ba05f7bfa42882d309a7070c47e2d4 305 Hamap MF_00388 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [lpxC]. 2 281 48.906 T 21-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 VFU_RS14205 43ba05f7bfa42882d309a7070c47e2d4 305 PANTHER PTHR33694 1 305 7.4E-141 T 21-04-2016 VFU_RS13885 d63f8c7725e17dec2d3f264bb46f189d 406 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 17 60 3.7E-10 T 21-04-2016 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal VFU_RS10535 c72c2d08ae1c6a8c4e561ae948c7d10a 241 Pfam PF12119 Protein of unknown function (DUF3581) 1 217 9.2E-97 T 21-04-2016 IPR021974 Protein of unknown function DUF3581 VFU_RS04310 59e9c2ce86b7f3943fe2de14ac21d224 579 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 20 575 7.1E-157 T 21-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 VFU_RS04310 59e9c2ce86b7f3943fe2de14ac21d224 579 PANTHER PTHR30255:SF2 1 579 6.0E-222 T 21-04-2016 VFU_RS04310 59e9c2ce86b7f3943fe2de14ac21d224 579 SUPERFAMILY SSF64182 45 464 8.89E-119 T 21-04-2016 VFU_RS04310 59e9c2ce86b7f3943fe2de14ac21d224 579 Pfam PF01368 DHH family 71 208 9.3E-10 T 21-04-2016 IPR001667 DDH domain VFU_RS04310 59e9c2ce86b7f3943fe2de14ac21d224 579 PANTHER PTHR30255 1 579 6.0E-222 T 21-04-2016 VFU_RS04310 59e9c2ce86b7f3943fe2de14ac21d224 579 Pfam PF02272 DHHA1 domain 380 449 8.2E-15 T 21-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 VFU_RS13805 288414b613957d2eca52ad5e1b219420 367 PANTHER PTHR23091:SF256 1 178 4.2E-64 T 21-04-2016 VFU_RS13805 288414b613957d2eca52ad5e1b219420 367 Pfam PF11814 Peptidase_C39 like family 157 359 6.5E-80 T 21-04-2016 IPR021770 Protein of unknown function DUF3335 VFU_RS13805 288414b613957d2eca52ad5e1b219420 367 Pfam PF13673 Acetyltransferase (GNAT) domain 20 126 1.4E-16 T 21-04-2016 IPR000182 GNAT domain GO:0008080 VFU_RS13805 288414b613957d2eca52ad5e1b219420 367 SUPERFAMILY SSF55729 2 149 3.71E-30 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase VFU_RS13805 288414b613957d2eca52ad5e1b219420 367 PANTHER PTHR23091 1 178 4.2E-64 T 21-04-2016 VFU_RS13805 288414b613957d2eca52ad5e1b219420 367 Gene3D G3DSA:3.40.630.30 2 145 5.6E-30 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase VFU_RS08050 f4ce750b48f8f168939484f471a455cb 276 Gene3D G3DSA:3.40.50.720 1 217 4.1E-21 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS08050 f4ce750b48f8f168939484f471a455cb 276 Pfam PF13460 NAD(P)H-binding 9 176 7.0E-14 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS08050 f4ce750b48f8f168939484f471a455cb 276 SUPERFAMILY SSF51735 4 265 4.31E-25 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS13275 77aad92156aeffac4b07fe007cf2391d 144 SUPERFAMILY SSF55961 1 142 2.96E-33 T 21-04-2016 VFU_RS13275 77aad92156aeffac4b07fe007cf2391d 144 PANTHER PTHR12901 1 142 6.9E-66 T 21-04-2016 VFU_RS13275 77aad92156aeffac4b07fe007cf2391d 144 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 8.9E-31 T 21-04-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain VFU_RS13275 77aad92156aeffac4b07fe007cf2391d 144 PANTHER PTHR12901:SF7 1 142 6.9E-66 T 21-04-2016 VFU_RS13275 77aad92156aeffac4b07fe007cf2391d 144 Gene3D G3DSA:3.30.530.20 1 142 4.7E-47 T 21-04-2016 IPR023393 START-like domain VFU_RS09525 0638dbdd788d0c8665796bdf0e320dd5 160 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 160 29.459 T 21-04-2016 IPR007551 Protein of unknown function DUF520 VFU_RS09525 0638dbdd788d0c8665796bdf0e320dd5 160 Gene3D G3DSA:3.30.70.990 9 93 3.2E-30 T 21-04-2016 VFU_RS09525 0638dbdd788d0c8665796bdf0e320dd5 160 SUPERFAMILY SSF89963 88 160 1.86E-28 T 21-04-2016 IPR007551 Protein of unknown function DUF520 VFU_RS09525 0638dbdd788d0c8665796bdf0e320dd5 160 PANTHER PTHR30476 1 160 8.0E-92 T 21-04-2016 VFU_RS09525 0638dbdd788d0c8665796bdf0e320dd5 160 PANTHER PTHR30476:SF0 1 160 8.0E-92 T 21-04-2016 VFU_RS09525 0638dbdd788d0c8665796bdf0e320dd5 160 Pfam PF04461 Protein of unknown function (DUF520) 2 159 8.6E-64 T 21-04-2016 IPR007551 Protein of unknown function DUF520 VFU_RS09525 0638dbdd788d0c8665796bdf0e320dd5 160 Gene3D G3DSA:3.30.70.860 94 160 1.1E-33 T 21-04-2016 VFU_RS09525 0638dbdd788d0c8665796bdf0e320dd5 160 SUPERFAMILY SSF89963 2 85 5.62E-31 T 21-04-2016 IPR007551 Protein of unknown function DUF520 VFU_RS10105 04f7a4a712a320c6a0205af56fb480ae 387 PANTHER PTHR30294 1 385 6.3E-148 T 21-04-2016 VFU_RS10105 04f7a4a712a320c6a0205af56fb480ae 387 Pfam PF12698 ABC-2 family transporter protein 17 361 9.5E-41 T 21-04-2016 VFU_RS10105 04f7a4a712a320c6a0205af56fb480ae 387 PANTHER PTHR30294:SF19 1 385 6.3E-148 T 21-04-2016 VFU_RS12210 b4f47df1a27f74c2a176e7ea18b69c5f 336 Pfam PF05125 Phage major capsid protein, P2 family 14 328 1.1E-105 T 21-04-2016 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 VFU_RS12210 b4f47df1a27f74c2a176e7ea18b69c5f 336 TIGRFAM TIGR01551 major_capsid_P2: phage major capsid protein, P2 family 22 328 1.2E-91 T 21-04-2016 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 VFU_RS08470 1f6a711a660dce78d43b11ee26215b4c 185 PANTHER PTHR35011 19 181 2.0E-15 T 21-04-2016 VFU_RS08470 1f6a711a660dce78d43b11ee26215b4c 185 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 39 176 8.4E-20 T 21-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component VFU_RS14365 252e50889e29973ba9800e8e195a45c0 247 Gene3D G3DSA:1.10.1270.20 163 244 3.5E-35 T 21-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VFU_RS14365 252e50889e29973ba9800e8e195a45c0 247 PIRSF PIRSF000386 1 247 3.2E-100 T 21-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VFU_RS14365 252e50889e29973ba9800e8e195a45c0 247 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 247 116.723 T 21-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VFU_RS14365 252e50889e29973ba9800e8e195a45c0 247 PANTHER PTHR32125:SF1 1 228 6.5E-119 T 21-04-2016 VFU_RS14365 252e50889e29973ba9800e8e195a45c0 247 SUPERFAMILY SSF75217 1 245 1.9E-101 T 21-04-2016 IPR029028 Alpha/beta knot methyltransferases VFU_RS14365 252e50889e29973ba9800e8e195a45c0 247 PANTHER PTHR32125 1 228 6.5E-119 T 21-04-2016 VFU_RS14365 252e50889e29973ba9800e8e195a45c0 247 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 4.5E-69 T 21-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VFU_RS14365 252e50889e29973ba9800e8e195a45c0 247 Gene3D G3DSA:3.40.1280.10 1 160 3.2E-67 T 21-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VFU_RS14365 252e50889e29973ba9800e8e195a45c0 247 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 234 3.7E-107 T 21-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VFU_RS13035 4f09877806c99780b7b5fe3208d03a1f 174 PANTHER PTHR31223 78 103 1.6E-47 T 21-04-2016 VFU_RS13035 4f09877806c99780b7b5fe3208d03a1f 174 PANTHER PTHR31223 1 61 1.6E-47 T 21-04-2016 VFU_RS13035 4f09877806c99780b7b5fe3208d03a1f 174 PANTHER PTHR31223:SF12 78 103 1.6E-47 T 21-04-2016 VFU_RS13035 4f09877806c99780b7b5fe3208d03a1f 174 PANTHER PTHR31223:SF12 1 61 1.6E-47 T 21-04-2016 VFU_RS13035 4f09877806c99780b7b5fe3208d03a1f 174 Pfam PF03641 Possible lysine decarboxylase 1 48 2.7E-5 T 21-04-2016 IPR031100 LOG family VFU_RS13035 4f09877806c99780b7b5fe3208d03a1f 174 Pfam PF11892 Domain of unknown function (DUF3412) 52 173 5.4E-59 T 21-04-2016 IPR021826 Protein of unknown function DUF3412 VFU_RS13035 4f09877806c99780b7b5fe3208d03a1f 174 Gene3D G3DSA:3.40.50.450 1 172 1.7E-57 T 21-04-2016 VFU_RS04780 5974edaf05c5cacd921edfbd3c223179 382 PANTHER PTHR10010 19 381 3.4E-129 T 21-04-2016 VFU_RS04780 5974edaf05c5cacd921edfbd3c223179 382 Pfam PF02690 Na+/Pi-cotransporter 30 151 3.0E-23 T 21-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 VFU_RS04780 5974edaf05c5cacd921edfbd3c223179 382 Pfam PF02690 Na+/Pi-cotransporter 218 325 2.0E-19 T 21-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 VFU_RS04780 5974edaf05c5cacd921edfbd3c223179 382 PANTHER PTHR10010:SF8 19 381 3.4E-129 T 21-04-2016 IPR030147 Sodium-dependent phosphate transporter NptA-like GO:0015114|GO:0035435 VFU_RS09175 2d85572ea377011ab432bdf09d6a8131 153 Pfam PF11749 Protein of unknown function (DUF3305) 57 143 6.8E-19 T 21-04-2016 IPR021736 Protein of unknown function DUF3305 VFU_RS02220 96ccc355bf76d298744ecc465e5e6384 104 Pfam PF01491 Frataxin-like domain 1 100 5.4E-31 T 21-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 VFU_RS02220 96ccc355bf76d298744ecc465e5e6384 104 ProSitePatterns PS01344 Frataxin family signature. 48 62 - T 21-04-2016 IPR020895 Frataxin conserved site VFU_RS02220 96ccc355bf76d298744ecc465e5e6384 104 SMART SM01219 1 104 2.6E-54 T 21-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 VFU_RS02220 96ccc355bf76d298744ecc465e5e6384 104 Hamap MF_00142 Protein CyaY [cyaY]. 1 103 27.425 T 21-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 VFU_RS02220 96ccc355bf76d298744ecc465e5e6384 104 SUPERFAMILY SSF55387 1 103 2.79E-39 T 21-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 VFU_RS02220 96ccc355bf76d298744ecc465e5e6384 104 PANTHER PTHR16821 1 103 8.6E-37 T 21-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 VFU_RS02220 96ccc355bf76d298744ecc465e5e6384 104 Gene3D G3DSA:3.30.920.10 1 103 6.5E-35 T 21-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 VFU_RS02220 96ccc355bf76d298744ecc465e5e6384 104 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 103 2.4E-42 T 21-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 VFU_RS00035 c85d2cae86e2480c337d9b5301e45a6e 240 PANTHER PTHR35568:SF3 14 240 5.6E-173 T 21-04-2016 VFU_RS00035 c85d2cae86e2480c337d9b5301e45a6e 240 Pfam PF08348 YheO-like PAS domain 31 139 3.4E-35 T 21-04-2016 IPR013559 YheO-like VFU_RS00035 c85d2cae86e2480c337d9b5301e45a6e 240 Pfam PF13309 HTH domain 174 231 6.0E-18 T 21-04-2016 VFU_RS00035 c85d2cae86e2480c337d9b5301e45a6e 240 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 30 143 2.0E-61 T 21-04-2016 IPR013559 YheO-like VFU_RS00035 c85d2cae86e2480c337d9b5301e45a6e 240 PANTHER PTHR35568 14 240 5.6E-173 T 21-04-2016 VFU_RS08585 868ab7071eb1d1002f84b843b11500d8 362 PANTHER PTHR33376 4 348 5.0E-152 T 21-04-2016 VFU_RS08585 868ab7071eb1d1002f84b843b11500d8 362 PANTHER PTHR33376:SF5 4 348 5.0E-152 T 21-04-2016 VFU_RS08585 868ab7071eb1d1002f84b843b11500d8 362 PIRSF PIRSF039026 4 362 1.3E-142 T 21-04-2016 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like VFU_RS08585 868ab7071eb1d1002f84b843b11500d8 362 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 41 327 1.2E-71 T 21-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 VFU_RS13995 986368ad9da3b5d9a43a514410f6264e 421 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 4.5E-25 T 21-04-2016 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 VFU_RS13995 986368ad9da3b5d9a43a514410f6264e 421 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 197 418 1.2E-72 T 21-04-2016 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 VFU_RS13995 986368ad9da3b5d9a43a514410f6264e 421 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 418 5.4E-150 T 21-04-2016 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 VFU_RS13995 986368ad9da3b5d9a43a514410f6264e 421 Pfam PF07670 Nucleoside recognition 95 191 1.4E-7 T 21-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 VFU_RS13995 986368ad9da3b5d9a43a514410f6264e 421 PANTHER PTHR10590 4 418 5.6E-215 T 21-04-2016 IPR008276 Concentrative nucleoside transporter GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 VFU_RS05770 68aed10288685e64a7e0cce496392ba3 357 PANTHER PTHR21716:SF19 7 356 1.9E-152 T 21-04-2016 VFU_RS05770 68aed10288685e64a7e0cce496392ba3 357 PANTHER PTHR21716 7 356 1.9E-152 T 21-04-2016 IPR002549 Transmembrane protein TqsA-like VFU_RS05770 68aed10288685e64a7e0cce496392ba3 357 Pfam PF01594 Domain of unknown function DUF20 20 345 6.9E-77 T 21-04-2016 IPR002549 Transmembrane protein TqsA-like VFU_RS11480 063c6ab07ba296e0ff325ddf12f386f4 182 Pfam PF07445 Primosomal replication protein priC 5 179 1.7E-54 T 21-04-2016 IPR010890 Primosomal replication PriB/PriC VFU_RS06325 1aff3dd36fb25f8d133e328b0b8c52a0 251 PRINTS PR01805 VacJ lipoprotein signature 36 49 3.0E-29 T 21-04-2016 IPR007428 MlaA lipoprotein GO:0016020 VFU_RS06325 1aff3dd36fb25f8d133e328b0b8c52a0 251 PRINTS PR01805 VacJ lipoprotein signature 105 122 3.0E-29 T 21-04-2016 IPR007428 MlaA lipoprotein GO:0016020 VFU_RS06325 1aff3dd36fb25f8d133e328b0b8c52a0 251 PRINTS PR01805 VacJ lipoprotein signature 142 159 3.0E-29 T 21-04-2016 IPR007428 MlaA lipoprotein GO:0016020 VFU_RS06325 1aff3dd36fb25f8d133e328b0b8c52a0 251 PRINTS PR01805 VacJ lipoprotein signature 54 70 3.0E-29 T 21-04-2016 IPR007428 MlaA lipoprotein GO:0016020 VFU_RS06325 1aff3dd36fb25f8d133e328b0b8c52a0 251 Pfam PF04333 MlaA lipoprotein 34 226 7.2E-64 T 21-04-2016 IPR007428 MlaA lipoprotein GO:0016020 VFU_RS06325 1aff3dd36fb25f8d133e328b0b8c52a0 251 PANTHER PTHR30035:SF3 13 250 1.6E-102 T 21-04-2016 VFU_RS06325 1aff3dd36fb25f8d133e328b0b8c52a0 251 PANTHER PTHR30035 13 250 1.6E-102 T 21-04-2016 IPR007428 MlaA lipoprotein GO:0016020 VFU_RS02240 9907d5431315943577f6e77492883ab3 234 PANTHER PTHR38765 1 227 3.3E-75 T 21-04-2016 VFU_RS02240 9907d5431315943577f6e77492883ab3 234 Pfam PF04340 Protein of unknown function, DUF484 6 222 3.8E-73 T 21-04-2016 IPR007435 Protein of unknown function DUF484 VFU_RS05100 513ade45a3c548a31990f70e1898a84b 248 Pfam PF11101 Protein of unknown function (DUF2884) 23 246 1.1E-68 T 21-04-2016 IPR021307 Protein of unknown function DUF2884 VFU_RS09120 127cf28a6315d4bb12092bf78fe20fad 89 Pfam PF11173 Protein of unknown function (DUF2960) 1 76 5.6E-36 T 21-04-2016 IPR021343 Protein of unknown function DUF2960 VFU_RS01440 2a037381ea61e75fbd42c23916deb412 371 PANTHER PTHR32039 56 370 2.6E-114 T 21-04-2016 VFU_RS01440 2a037381ea61e75fbd42c23916deb412 371 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 72 286 7.5E-74 T 21-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 VFU_RS01440 2a037381ea61e75fbd42c23916deb412 371 Gene3D G3DSA:3.40.50.450 113 257 2.6E-12 T 21-04-2016 VFU_RS01440 2a037381ea61e75fbd42c23916deb412 371 PANTHER PTHR32039:SF8 56 370 2.6E-114 T 21-04-2016 VFU_RS01440 2a037381ea61e75fbd42c23916deb412 371 Pfam PF02481 DNA recombination-mediator protein A 75 278 5.0E-79 T 21-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 VFU_RS01440 2a037381ea61e75fbd42c23916deb412 371 SUPERFAMILY SSF102405 81 286 1.3E-41 T 21-04-2016 VFU_RS00965 dc3d410e984df896efaf8e6913557951 306 PANTHER PTHR34631:SF2 3 306 4.2E-198 T 21-04-2016 VFU_RS00965 dc3d410e984df896efaf8e6913557951 306 Pfam PF13737 Transposase DDE domain 19 129 9.7E-45 T 21-04-2016 IPR025668 Transposase DDE domain VFU_RS00965 dc3d410e984df896efaf8e6913557951 306 PANTHER PTHR34631 3 306 4.2E-198 T 21-04-2016 VFU_RS13300 8ef905c704705a2c4f1d06bc9f5ea561 789 PANTHER PTHR30195 118 357 1.6E-116 T 21-04-2016 VFU_RS13300 8ef905c704705a2c4f1d06bc9f5ea561 789 PANTHER PTHR30195 373 786 1.6E-116 T 21-04-2016 VFU_RS13300 8ef905c704705a2c4f1d06bc9f5ea561 789 Pfam PF12161 HsdM N-terminal domain 11 160 4.8E-20 T 21-04-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain VFU_RS13300 8ef905c704705a2c4f1d06bc9f5ea561 789 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 303 309 - T 21-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VFU_RS13300 8ef905c704705a2c4f1d06bc9f5ea561 789 Gene3D G3DSA:3.40.50.150 197 456 2.6E-29 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS13300 8ef905c704705a2c4f1d06bc9f5ea561 789 PANTHER PTHR30195:SF10 118 357 1.6E-116 T 21-04-2016 VFU_RS13300 8ef905c704705a2c4f1d06bc9f5ea561 789 PANTHER PTHR30195:SF10 373 786 1.6E-116 T 21-04-2016 VFU_RS13300 8ef905c704705a2c4f1d06bc9f5ea561 789 SUPERFAMILY SSF53335 8 46 6.73E-113 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS13300 8ef905c704705a2c4f1d06bc9f5ea561 789 SUPERFAMILY SSF53335 97 529 6.73E-113 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VFU_RS13300 8ef905c704705a2c4f1d06bc9f5ea561 789 Pfam PF02384 N-6 DNA Methylase 175 485 4.7E-53 T 21-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 VFU_RS13300 8ef905c704705a2c4f1d06bc9f5ea561 789 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 228 242 3.4E-10 T 21-04-2016 VFU_RS13300 8ef905c704705a2c4f1d06bc9f5ea561 789 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 195 211 3.4E-10 T 21-04-2016 VFU_RS13300 8ef905c704705a2c4f1d06bc9f5ea561 789 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 300 312 3.4E-10 T 21-04-2016 VFU_RS13690 43f92dbf9c52e8f304bc80a3c6be02bd 473 Gene3D G3DSA:1.20.1250.20 264 466 2.8E-15 T 21-04-2016 VFU_RS13690 43f92dbf9c52e8f304bc80a3c6be02bd 473 Gene3D G3DSA:1.20.1250.20 14 186 1.6E-29 T 21-04-2016 VFU_RS13690 43f92dbf9c52e8f304bc80a3c6be02bd 473 SUPERFAMILY SSF103473 4 194 5.23E-62 T 21-04-2016 IPR020846 Major facilitator superfamily domain VFU_RS13690 43f92dbf9c52e8f304bc80a3c6be02bd 473 SUPERFAMILY SSF103473 247 466 5.23E-62 T 21-04-2016 IPR020846 Major facilitator superfamily domain VFU_RS13690 43f92dbf9c52e8f304bc80a3c6be02bd 473 Pfam PF07690 Major Facilitator Superfamily 18 407 6.7E-49 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VFU_RS13690 43f92dbf9c52e8f304bc80a3c6be02bd 473 PANTHER PTHR23501 1 470 7.8E-132 T 21-04-2016 VFU_RS13690 43f92dbf9c52e8f304bc80a3c6be02bd 473 PANTHER PTHR23501:SF73 1 470 7.8E-132 T 21-04-2016 VFU_RS13690 43f92dbf9c52e8f304bc80a3c6be02bd 473 ProSitePatterns PS00217 Sugar transport proteins signature 2. 108 133 - T 21-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 VFU_RS06785 d2557a1d0a419dd5e99460b6f4180498 174 Pfam PF10135 Rod binding protein 54 104 2.8E-13 T 21-04-2016 IPR019301 Flagellar protein FlgJ, N-terminal VFU_RS07125 662198c9fed8cc0ccfb546a89862fba9 460 Gene3D G3DSA:1.20.1600.10 38 440 1.2E-32 T 21-04-2016 VFU_RS07125 662198c9fed8cc0ccfb546a89862fba9 460 Pfam PF02321 Outer membrane efflux protein 43 225 3.7E-6 T 21-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VFU_RS07125 662198c9fed8cc0ccfb546a89862fba9 460 Pfam PF02321 Outer membrane efflux protein 263 440 3.5E-19 T 21-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VFU_RS07125 662198c9fed8cc0ccfb546a89862fba9 460 SUPERFAMILY SSF56954 9 440 1.29E-50 T 21-04-2016 VFU_RS07525 497f09c99373ef5cd47339207df75f4f 86 Gene3D G3DSA:1.10.1200.10 3 83 4.7E-18 T 21-04-2016 IPR009081 Phosphopantetheine binding ACP domain VFU_RS07525 497f09c99373ef5cd47339207df75f4f 86 Pfam PF00550 Phosphopantetheine attachment site 7 80 5.7E-11 T 21-04-2016 IPR009081 Phosphopantetheine binding ACP domain VFU_RS07525 497f09c99373ef5cd47339207df75f4f 86 SUPERFAMILY SSF47336 5 84 5.5E-14 T 21-04-2016 IPR009081 Phosphopantetheine binding ACP domain VFU_RS13400 b883dc6be4083b91a9f9a5af31122fda 540 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 61 267 6.4E-34 T 21-04-2016 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 VFU_RS13400 b883dc6be4083b91a9f9a5af31122fda 540 TIGRFAM TIGR02783 TrbL_P: P-type conjugative transfer protein TrbL 27 333 5.3E-75 T 21-04-2016 IPR014150 Conjugal transfer, TrbL VFU_RS04660 8de189cdfea63c0e46a09e8f9a16de3e 292 PANTHER PTHR30217 1 292 8.2E-203 T 21-04-2016 VFU_RS04660 8de189cdfea63c0e46a09e8f9a16de3e 292 PANTHER PTHR30217:SF8 1 292 8.2E-203 T 21-04-2016 VFU_RS04660 8de189cdfea63c0e46a09e8f9a16de3e 292 Pfam PF01136 Peptidase family U32 81 210 3.6E-15 T 21-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VFU_RS14015 3aa67a3e6bc2aa3fd093b379cb457213 59 Pfam PF12065 Protein of unknown function (DUF3545) 1 58 1.2E-23 T 21-04-2016 IPR021932 Protein of unknown function DUF3545 VFU_RS09940 e3c619280013770a0645ad54ef499e31 230 PIRSF PIRSF028063 1 221 7.4E-133 T 21-04-2016 IPR014538 Uncharacterised conserved protein, topoisomerase zinc finger VFU_RS09940 e3c619280013770a0645ad54ef499e31 230 Pfam PF10881 Protein of unknown function (DUF2726) 38 160 2.5E-35 T 21-04-2016 IPR024402 Domain of unknown function DUF2726 VFU_RS09940 e3c619280013770a0645ad54ef499e31 230 Gene3D G3DSA:3.30.65.10 174 212 2.5E-4 T 21-04-2016 VFU_RS03845 bc02d5b76efb5b0b05e4260574287f38 59 Gene3D G3DSA:1.10.10.10 4 55 1.0E-4 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS03845 bc02d5b76efb5b0b05e4260574287f38 59 Pfam PF12728 Helix-turn-helix domain 4 53 1.8E-11 T 21-04-2016 VFU_RS03845 bc02d5b76efb5b0b05e4260574287f38 59 SUPERFAMILY SSF46955 3 56 2.56E-6 T 21-04-2016 IPR009061 Putative DNA-binding domain VFU_RS03785 cdbb79d2fb226364920f2a3ab4748a52 309 Pfam PF11185 Protein of unknown function (DUF2971) 81 166 1.8E-9 T 21-04-2016 IPR021352 Protein of unknown function DUF2971 VFU_RS02155 09c92b68ab3b43a3ebb3cc87c2bed938 142 Gene3D G3DSA:3.40.630.30 8 123 2.8E-16 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase VFU_RS02155 09c92b68ab3b43a3ebb3cc87c2bed938 142 Pfam PF00583 Acetyltransferase (GNAT) family 44 120 6.3E-5 T 21-04-2016 IPR000182 GNAT domain GO:0008080 VFU_RS02155 09c92b68ab3b43a3ebb3cc87c2bed938 142 SUPERFAMILY SSF55729 1 126 3.66E-16 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase VFU_RS21860 97a2959c18376e4cfd42f438e77fc20e 172 PANTHER PTHR33362 1 172 1.5E-60 T 21-04-2016 VFU_RS21860 97a2959c18376e4cfd42f438e77fc20e 172 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 2 171 5.6E-44 T 21-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VFU_RS21860 97a2959c18376e4cfd42f438e77fc20e 172 PANTHER PTHR33362:SF2 1 172 1.5E-60 T 21-04-2016 VFU_RS05085 9e326a56c8617fdf6298cea633f4c170 77 Pfam PF04400 Protein of unknown function (DUF539) 22 63 1.7E-21 T 21-04-2016 IPR007495 (Na+)-NQR maturation factor NqrM VFU_RS05085 9e326a56c8617fdf6298cea633f4c170 77 PANTHER PTHR40691 2 76 1.0E-28 T 21-04-2016 VFU_RS05275 e761ebf65dc8b85c4fab4505bb7ed092 280 PANTHER PTHR13773:SF0 1 280 2.8E-77 T 21-04-2016 VFU_RS05275 e761ebf65dc8b85c4fab4505bb7ed092 280 PANTHER PTHR13773 1 280 2.8E-77 T 21-04-2016 VFU_RS05275 e761ebf65dc8b85c4fab4505bb7ed092 280 Pfam PF01148 Cytidylyltransferase family 2 280 1.9E-69 T 21-04-2016 VFU_RS05275 e761ebf65dc8b85c4fab4505bb7ed092 280 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 238 264 - T 21-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 VFU_RS13415 70bf73f0e312cf69028e0dda2c558a7e 63 SUPERFAMILY SSF47598 2 45 1.0E-13 T 21-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 VFU_RS13415 70bf73f0e312cf69028e0dda2c558a7e 63 Gene3D G3DSA:1.10.1220.10 9 41 5.7E-6 T 21-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 VFU_RS00055 3a156de05fd85ccebb11bf6e5bd3c81b 62 PANTHER PTHR38602 5 62 5.5E-19 T 21-04-2016 VFU_RS00055 3a156de05fd85ccebb11bf6e5bd3c81b 62 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 59 1.6E-24 T 21-04-2016 IPR019201 Protein of unknown function DUF2065 VFU_RS00055 3a156de05fd85ccebb11bf6e5bd3c81b 62 PANTHER PTHR38602:SF1 5 62 5.5E-19 T 21-04-2016 VFU_RS10760 379a4645a8fe62f12915cabf90e22620 571 SUPERFAMILY SSF48371 148 258 2.62E-7 T 21-04-2016 IPR016024 Armadillo-type fold GO:0005488 VFU_RS10760 379a4645a8fe62f12915cabf90e22620 571 Gene3D G3DSA:1.25.10.10 145 248 3.1E-6 T 21-04-2016 IPR011989 Armadillo-like helical VFU_RS06300 821934f7af0fd8b9a4b0a83c02d81c21 160 Gene3D G3DSA:2.40.50.140 26 129 5.5E-40 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS06300 821934f7af0fd8b9a4b0a83c02d81c21 160 SUPERFAMILY SSF82093 30 141 1.23E-39 T 21-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 VFU_RS06300 821934f7af0fd8b9a4b0a83c02d81c21 160 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 145 32.661 T 21-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 VFU_RS06300 821934f7af0fd8b9a4b0a83c02d81c21 160 PANTHER PTHR34128:SF1 1 160 3.5E-77 T 21-04-2016 VFU_RS06300 821934f7af0fd8b9a4b0a83c02d81c21 160 Pfam PF03100 CcmE 4 135 1.7E-45 T 21-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 VFU_RS06300 821934f7af0fd8b9a4b0a83c02d81c21 160 PANTHER PTHR34128 1 160 3.5E-77 T 21-04-2016 VFU_RS04545 697543340356e6c6f5368ba1529d522c 281 Gene3D G3DSA:1.10.357.20 98 278 2.0E-51 T 21-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 VFU_RS04545 697543340356e6c6f5368ba1529d522c 281 Pfam PF01769 Divalent cation transporter 142 272 6.0E-26 T 21-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 VFU_RS04545 697543340356e6c6f5368ba1529d522c 281 SUPERFAMILY SSF161093 99 278 1.96E-43 T 21-04-2016 VFU_RS04545 697543340356e6c6f5368ba1529d522c 281 PANTHER PTHR41394 63 279 1.4E-29 T 21-04-2016 VFU_RS02450 edf50fe0d9cf5e39f55ff07a08cdaa2d 224 Pfam PF01902 Diphthamide synthase 3 212 5.1E-23 T 21-04-2016 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|UniPathway: UPA00559 VFU_RS02450 edf50fe0d9cf5e39f55ff07a08cdaa2d 224 Gene3D G3DSA:3.40.50.620 1 141 3.0E-24 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VFU_RS02450 edf50fe0d9cf5e39f55ff07a08cdaa2d 224 Gene3D G3DSA:3.90.1490.10 145 210 8.6E-12 T 21-04-2016 VFU_RS02450 edf50fe0d9cf5e39f55ff07a08cdaa2d 224 SUPERFAMILY SSF52402 1 215 4.38E-53 T 21-04-2016 VFU_RS20555 2ed95aad916100f184f0cc787b14f3ed 99 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 65 99 3.0E-10 T 21-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VFU_RS20555 2ed95aad916100f184f0cc787b14f3ed 99 SUPERFAMILY SSF56037 24 99 6.54E-15 T 21-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 VFU_RS20555 2ed95aad916100f184f0cc787b14f3ed 99 Pfam PF11734 TilS substrate C-terminal domain 67 99 1.2E-9 T 21-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VFU_RS08140 aa1983e64c30518e50c331ef3008745d 320 PANTHER PTHR30465 171 314 1.4E-159 T 21-04-2016 VFU_RS08140 aa1983e64c30518e50c331ef3008745d 320 PANTHER PTHR30465 1 146 1.4E-159 T 21-04-2016 VFU_RS08140 aa1983e64c30518e50c331ef3008745d 320 SUPERFAMILY SSF161098 177 298 1.6E-21 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS08140 aa1983e64c30518e50c331ef3008745d 320 SUPERFAMILY SSF161098 71 137 1.6E-21 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS08140 aa1983e64c30518e50c331ef3008745d 320 PANTHER PTHR30465:SF65 171 314 1.4E-159 T 21-04-2016 VFU_RS08140 aa1983e64c30518e50c331ef3008745d 320 PANTHER PTHR30465:SF65 1 146 1.4E-159 T 21-04-2016 VFU_RS08140 aa1983e64c30518e50c331ef3008745d 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 314 5.9E-44 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS08140 aa1983e64c30518e50c331ef3008745d 320 Gene3D G3DSA:1.10.3720.10 73 137 9.9E-19 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS08140 aa1983e64c30518e50c331ef3008745d 320 Gene3D G3DSA:1.10.3720.10 177 306 9.9E-19 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VFU_RS02335 bf84eb9cbf0210768f213e8d746721bc 78 Pfam PF10678 Protein of unknown function (DUF2492) 4 77 6.1E-26 T 21-04-2016 IPR019620 Putative metal-binding protein VFU_RS02335 bf84eb9cbf0210768f213e8d746721bc 78 TIGRFAM TIGR03853 matur_matur: putative metal-binding protein 4 78 1.3E-27 T 21-04-2016 IPR019620 Putative metal-binding protein VFU_RS10630 020202e59e72844a80a791526c6bc10e 490 PANTHER PTHR33451:SF7 42 490 1.3E-102 T 21-04-2016 VFU_RS10630 020202e59e72844a80a791526c6bc10e 490 PANTHER PTHR33451 42 490 1.3E-102 T 21-04-2016 VFU_RS10630 020202e59e72844a80a791526c6bc10e 490 Pfam PF03553 Na+/H+ antiporter family 54 216 3.8E-5 T 21-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VFU_RS10630 020202e59e72844a80a791526c6bc10e 490 Pfam PF03553 Na+/H+ antiporter family 223 489 7.3E-25 T 21-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VFU_RS05860 b4df40a25360af6af23f52d654c7ebdf 116 Pfam PF11169 Protein of unknown function (DUF2956) 8 112 7.1E-43 T 21-04-2016 IPR021339 Protein of unknown function DUF2956 VFU_RS03490 228b55fdd98e92f152952cc0955fd3bc 164 Pfam PF11736 Protein of unknown function (DUF3299) 27 161 2.3E-45 T 21-04-2016 IPR021727 Protein of unknown function DUF3299 VFU_RS03140 881788aa5450d4f7a5ac8cfbc59154cd 506 Gene3D G3DSA:3.40.50.300 26 153 2.5E-6 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS03140 881788aa5450d4f7a5ac8cfbc59154cd 506 SUPERFAMILY SSF52540 26 189 9.93E-12 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS03140 881788aa5450d4f7a5ac8cfbc59154cd 506 Pfam PF13401 AAA domain 27 150 2.4E-9 T 21-04-2016 IPR003593 AAA+ ATPase domain VFU_RS03140 881788aa5450d4f7a5ac8cfbc59154cd 506 Pfam PF05036 Sporulation related domain 419 492 3.0E-8 T 21-04-2016 IPR007730 Sporulation-related domain GO:0042834 VFU_RS03600 d564f315d8b6384c6d1063470536d1a7 286 Gene3D G3DSA:3.40.50.300 1 155 7.4E-17 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS03600 d564f315d8b6384c6d1063470536d1a7 286 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 283 40.884 T 21-04-2016 IPR005337 RapZ-like family GO:0005524 VFU_RS03600 d564f315d8b6384c6d1063470536d1a7 286 Pfam PF03668 P-loop ATPase protein family 1 284 1.1E-111 T 21-04-2016 IPR005337 RapZ-like family GO:0005524 VFU_RS03600 d564f315d8b6384c6d1063470536d1a7 286 PIRSF PIRSF005052 1 286 6.8E-107 T 21-04-2016 IPR005337 RapZ-like family GO:0005524 VFU_RS03600 d564f315d8b6384c6d1063470536d1a7 286 PANTHER PTHR30448:SF0 1 285 8.5E-144 T 21-04-2016 VFU_RS03600 d564f315d8b6384c6d1063470536d1a7 286 SUPERFAMILY SSF52540 1 151 1.03E-12 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS03600 d564f315d8b6384c6d1063470536d1a7 286 PANTHER PTHR30448 1 285 8.5E-144 T 21-04-2016 VFU_RS11285 13a296c97fe96079bec29b0a608e941c 247 Pfam PF07670 Nucleoside recognition 86 180 1.7E-10 T 21-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 VFU_RS12225 9fc98e8d0acb26d90ee77a75da222154 343 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 49 326 3.2E-65 T 21-04-2016 IPR006430 Phage portal protein PBSX family VFU_RS12225 9fc98e8d0acb26d90ee77a75da222154 343 PIRSF PIRSF018494 2 342 8.4E-127 T 21-04-2016 IPR030935 Phage portal protein PBSX family, Proteobacteria VFU_RS07905 fd17bfdc42260d442f38fbc78aaf5646 242 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 41 219 5.2E-78 T 21-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 VFU_RS07905 fd17bfdc42260d442f38fbc78aaf5646 242 SUPERFAMILY SSF55729 5 232 1.27E-84 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase VFU_RS07905 fd17bfdc42260d442f38fbc78aaf5646 242 PANTHER PTHR30098 1 232 6.3E-82 T 21-04-2016 VFU_RS07905 fd17bfdc42260d442f38fbc78aaf5646 242 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 242 86.528 T 21-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 VFU_RS07905 fd17bfdc42260d442f38fbc78aaf5646 242 PANTHER PTHR30098:SF2 1 232 6.3E-82 T 21-04-2016 VFU_RS07905 fd17bfdc42260d442f38fbc78aaf5646 242 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 37 205 4.5E-67 T 21-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 VFU_RS20050 a5841e13f263294c0f77420ffa83b77c 99 Pfam PF02690 Na+/Pi-cotransporter 2 89 4.7E-20 T 21-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 VFU_RS20050 a5841e13f263294c0f77420ffa83b77c 99 PANTHER PTHR10010 1 99 4.9E-26 T 21-04-2016 VFU_RS20050 a5841e13f263294c0f77420ffa83b77c 99 PANTHER PTHR10010:SF8 1 99 4.9E-26 T 21-04-2016 IPR030147 Sodium-dependent phosphate transporter NptA-like GO:0015114|GO:0035435 VFU_RS06190 996ec2ce8421aca2117890985f38bf0b 76 Pfam PF09012 FeoC like transcriptional regulator 2 52 6.2E-13 T 21-04-2016 IPR015102 Transcriptional regulator HTH-type, FeoC VFU_RS06190 996ec2ce8421aca2117890985f38bf0b 76 Gene3D G3DSA:1.10.10.10 8 48 4.7E-5 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS06190 996ec2ce8421aca2117890985f38bf0b 76 SUPERFAMILY SSF46785 1 54 1.78E-12 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS08575 24abf552b261e31adc94edf97e1198bf 225 Pfam PF11201 Protein of unknown function (DUF2982) 67 217 7.6E-61 T 21-04-2016 IPR021367 Protein of unknown function DUF2982 VFU_RS15050 8f183f31af1d9d79ec853983778713c1 156 Pfam PF01316 Arginine repressor, DNA binding domain 7 74 7.3E-23 T 21-04-2016 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 UniPathway: UPA00068 VFU_RS15050 8f183f31af1d9d79ec853983778713c1 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 58.32 T 21-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 VFU_RS15050 8f183f31af1d9d79ec853983778713c1 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 145 5.0E-22 T 21-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 VFU_RS15050 8f183f31af1d9d79ec853983778713c1 156 PANTHER PTHR34471 2 156 8.1E-64 T 21-04-2016 VFU_RS15050 8f183f31af1d9d79ec853983778713c1 156 PANTHER PTHR34471:SF1 2 156 8.1E-64 T 21-04-2016 VFU_RS15050 8f183f31af1d9d79ec853983778713c1 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 147 1.8E-21 T 21-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 VFU_RS15050 8f183f31af1d9d79ec853983778713c1 156 Gene3D G3DSA:3.30.1360.40 80 154 5.8E-26 T 21-04-2016 IPR024946 Arginine repressor C-terminal-like domain VFU_RS15050 8f183f31af1d9d79ec853983778713c1 156 Gene3D G3DSA:1.10.10.10 2 77 5.0E-34 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS15050 8f183f31af1d9d79ec853983778713c1 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 10 151 9.5E-43 T 21-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 VFU_RS15050 8f183f31af1d9d79ec853983778713c1 156 SUPERFAMILY SSF55252 82 151 3.92E-19 T 21-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 VFU_RS15050 8f183f31af1d9d79ec853983778713c1 156 SUPERFAMILY SSF46785 3 77 5.53E-21 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS15050 8f183f31af1d9d79ec853983778713c1 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 3.5E-23 T 21-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 VFU_RS15050 8f183f31af1d9d79ec853983778713c1 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 3.5E-23 T 21-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 VFU_RS15050 8f183f31af1d9d79ec853983778713c1 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 3.5E-23 T 21-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 VFU_RS15050 8f183f31af1d9d79ec853983778713c1 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 3.5E-23 T 21-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 VFU_RS03290 de5d83c46bdf6c9fe5251231facc31d7 200 PANTHER PTHR10746 10 199 1.2E-93 T 21-04-2016 IPR013005 50S ribosomal protein uL4 VFU_RS03290 de5d83c46bdf6c9fe5251231facc31d7 200 Pfam PF00573 Ribosomal protein L4/L1 family 12 197 1.2E-65 T 21-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 VFU_RS03290 de5d83c46bdf6c9fe5251231facc31d7 200 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 12 197 2.1E-76 T 21-04-2016 IPR013005 50S ribosomal protein uL4 VFU_RS03290 de5d83c46bdf6c9fe5251231facc31d7 200 Gene3D G3DSA:3.40.1370.10 52 200 6.4E-60 T 21-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 VFU_RS03290 de5d83c46bdf6c9fe5251231facc31d7 200 SUPERFAMILY SSF52166 8 199 1.01E-73 T 21-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 VFU_RS03290 de5d83c46bdf6c9fe5251231facc31d7 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 3 200 34.057 T 21-04-2016 IPR013005 50S ribosomal protein uL4 VFU_RS22730 3700d5338339b7605a644ca9cd9ec4ba 92 Gene3D G3DSA:3.40.50.740 2 92 2.0E-16 T 21-04-2016 VFU_RS22730 3700d5338339b7605a644ca9cd9ec4ba 92 SUPERFAMILY SSF53706 2 92 3.66E-23 T 21-04-2016 VFU_RS22730 3700d5338339b7605a644ca9cd9ec4ba 92 Pfam PF00384 Molybdopterin oxidoreductase 5 81 1.2E-4 T 21-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 VFU_RS01485 b2ac2d8fbb4f681787c088e8bbbd90a4 263 PANTHER PTHR40053 1 260 3.6E-90 T 21-04-2016 VFU_RS01485 b2ac2d8fbb4f681787c088e8bbbd90a4 263 Pfam PF07070 SpoOM protein 4 218 3.6E-78 T 21-04-2016 IPR009776 Sporulation stage 0, protein M VFU_RS14345 6b0486f4f525f73c9e966cf11ec719f1 149 PANTHER PTHR39579 1 140 2.6E-45 T 21-04-2016 VFU_RS14345 6b0486f4f525f73c9e966cf11ec719f1 149 Pfam PF06295 Protein of unknown function (DUF1043) 6 131 2.6E-45 T 21-04-2016 IPR009386 Protein of unknown function DUF1043 VFU_RS14345 6b0486f4f525f73c9e966cf11ec719f1 149 PIRSF PIRSF006318 1 138 2.8E-50 T 21-04-2016 IPR009386 Protein of unknown function DUF1043 VFU_RS02805 51428b1c724ee5bb01da275903776524 481 Pfam PF03606 C4-dicarboxylate anaerobic carrier 20 477 2.1E-135 T 21-04-2016 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 VFU_RS02805 51428b1c724ee5bb01da275903776524 481 PANTHER PTHR10283 18 477 3.2E-184 T 21-04-2016 VFU_RS02805 51428b1c724ee5bb01da275903776524 481 PANTHER PTHR10283:SF90 18 477 3.2E-184 T 21-04-2016 VFU_RS06775 bd2399fc9de074cecbb7859023277202 215 PANTHER PTHR34933 36 215 5.4E-79 T 21-04-2016 VFU_RS06775 bd2399fc9de074cecbb7859023277202 215 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 212 24.013 T 21-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VFU_RS06775 bd2399fc9de074cecbb7859023277202 215 PANTHER PTHR34933:SF2 36 215 5.4E-79 T 21-04-2016 VFU_RS06775 bd2399fc9de074cecbb7859023277202 215 PRINTS PR01008 Flagellar L-ring protein signature 128 143 1.4E-21 T 21-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VFU_RS06775 bd2399fc9de074cecbb7859023277202 215 PRINTS PR01008 Flagellar L-ring protein signature 191 205 1.4E-21 T 21-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VFU_RS06775 bd2399fc9de074cecbb7859023277202 215 PRINTS PR01008 Flagellar L-ring protein signature 154 170 1.4E-21 T 21-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VFU_RS06775 bd2399fc9de074cecbb7859023277202 215 PRINTS PR01008 Flagellar L-ring protein signature 175 189 1.4E-21 T 21-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VFU_RS06775 bd2399fc9de074cecbb7859023277202 215 PRINTS PR01008 Flagellar L-ring protein signature 60 72 1.4E-21 T 21-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VFU_RS06775 bd2399fc9de074cecbb7859023277202 215 Pfam PF02107 Flagellar L-ring protein 38 213 5.0E-59 T 21-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VFU_RS14065 5a4f1d0e0adaa3a07f11bd1596a5a924 128 Pfam PF11697 Protein of unknown function (DUF3293) 30 99 6.4E-20 T 21-04-2016 IPR021710 Protein of unknown function DUF3293 VFU_RS07770 2954b230460193f92d8b27cb24f4f2f4 148 Pfam PF16036 Chalcone isomerase-like 8 145 3.1E-10 T 21-04-2016 IPR016087 Chalcone isomerase GO:0016872 VFU_RS13860 6db52e3b34427f6f04c592b0a84c0894 321 Pfam PF00482 Type II secretion system (T2SS), protein F 154 278 2.2E-19 T 21-04-2016 IPR018076 Type II secretion system F domain VFU_RS13860 6db52e3b34427f6f04c592b0a84c0894 321 PANTHER PTHR35007 1 321 3.0E-45 T 21-04-2016 VFU_RS13860 6db52e3b34427f6f04c592b0a84c0894 321 PANTHER PTHR35007:SF1 1 321 3.0E-45 T 21-04-2016 VFU_RS12150 dadefcd96daba9d7efd28f7fc148d398 628 Pfam PF10145 Phage-related minor tail protein 87 283 1.4E-28 T 21-04-2016 IPR010090 Phage tail tape measure protein VFU_RS12150 dadefcd96daba9d7efd28f7fc148d398 628 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 49 388 9.0E-24 T 21-04-2016 IPR010090 Phage tail tape measure protein VFU_RS08610 188740c04ce8a89bf4cb6fea8f806cc8 158 Gene3D G3DSA:1.10.10.10 2 139 1.8E-38 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS08610 188740c04ce8a89bf4cb6fea8f806cc8 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 2.8E-7 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VFU_RS08610 188740c04ce8a89bf4cb6fea8f806cc8 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 2.8E-7 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VFU_RS08610 188740c04ce8a89bf4cb6fea8f806cc8 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 2.8E-7 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VFU_RS08610 188740c04ce8a89bf4cb6fea8f806cc8 158 Pfam PF01047 MarR family 31 89 4.6E-15 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VFU_RS08610 188740c04ce8a89bf4cb6fea8f806cc8 158 SUPERFAMILY SSF46785 5 140 2.08E-31 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS08610 188740c04ce8a89bf4cb6fea8f806cc8 158 SMART SM00347 24 124 1.1E-22 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VFU_RS08610 188740c04ce8a89bf4cb6fea8f806cc8 158 PANTHER PTHR33164 4 148 3.5E-23 T 21-04-2016 VFU_RS00790 c16cd81ed3a85ad3ffd107fd8eb929a1 263 PANTHER PTHR10859 6 112 2.3E-25 T 21-04-2016 VFU_RS00790 c16cd81ed3a85ad3ffd107fd8eb929a1 263 SUPERFAMILY SSF53448 3 145 1.53E-23 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VFU_RS00790 c16cd81ed3a85ad3ffd107fd8eb929a1 263 Pfam PF00535 Glycosyl transferase family 2 10 116 1.3E-15 T 21-04-2016 IPR001173 Glycosyltransferase 2-like VFU_RS00790 c16cd81ed3a85ad3ffd107fd8eb929a1 263 Gene3D G3DSA:3.90.550.10 4 128 1.5E-13 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VFU_RS11665 85a133fbd398b8428f7826b9bc7dfb60 463 SUPERFAMILY SSF48452 66 160 2.18E-8 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VFU_RS11665 85a133fbd398b8428f7826b9bc7dfb60 463 SUPERFAMILY SSF48452 204 263 2.18E-8 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VFU_RS11665 85a133fbd398b8428f7826b9bc7dfb60 463 Gene3D G3DSA:1.25.40.10 134 164 5.4E-7 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VFU_RS11665 85a133fbd398b8428f7826b9bc7dfb60 463 Gene3D G3DSA:1.25.40.10 200 243 5.4E-7 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VFU_RS11665 85a133fbd398b8428f7826b9bc7dfb60 463 Gene3D G3DSA:1.25.40.10 43 102 5.4E-7 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VFU_RS13020 8759a55bcb491fd407035b7899b8fe0a 756 Gene3D G3DSA:1.25.40.10 174 442 2.0E-15 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VFU_RS13020 8759a55bcb491fd407035b7899b8fe0a 756 SUPERFAMILY SSF48452 175 361 2.81E-13 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VFU_RS13020 8759a55bcb491fd407035b7899b8fe0a 756 SMART SM00028 331 364 140.0 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VFU_RS13020 8759a55bcb491fd407035b7899b8fe0a 756 SMART SM00028 251 284 57.0 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VFU_RS13020 8759a55bcb491fd407035b7899b8fe0a 756 SMART SM00028 85 118 130.0 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VFU_RS13020 8759a55bcb491fd407035b7899b8fe0a 756 SMART SM00028 291 324 0.0027 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VFU_RS12205 7788c58ef5c6cc60af570184d882e8f8 236 Pfam PF05944 Phage small terminase subunit 35 166 8.0E-39 T 21-04-2016 IPR010270 Bacteriophage P2, GpM GO:0003677|GO:0004519|GO:0019069 VFU_RS02510 62b67e4be00e658eb3d8c0762b666556 176 Pfam PF13511 Domain of unknown function (DUF4124) 11 66 2.7E-10 T 21-04-2016 IPR025392 Domain of unknown function DUF4124 VFU_RS14385 e22910abb06e7c7ffae47f966ae1fa2b 264 Pfam PF01578 Cytochrome C assembly protein 37 262 9.7E-48 T 21-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 VFU_RS14385 e22910abb06e7c7ffae47f966ae1fa2b 264 PANTHER PTHR38034 3 264 1.5E-98 T 21-04-2016 VFU_RS00175 2d3aacd5f1b197f8a9dbf7939f76a074 295 SUPERFAMILY SSF103481 36 140 1.14E-9 T 21-04-2016 VFU_RS00175 2d3aacd5f1b197f8a9dbf7939f76a074 295 SUPERFAMILY SSF103481 216 294 6.67E-10 T 21-04-2016 VFU_RS00175 2d3aacd5f1b197f8a9dbf7939f76a074 295 PANTHER PTHR22911 1 294 3.6E-91 T 21-04-2016 VFU_RS00175 2d3aacd5f1b197f8a9dbf7939f76a074 295 PANTHER PTHR22911:SF64 1 294 3.6E-91 T 21-04-2016 VFU_RS00175 2d3aacd5f1b197f8a9dbf7939f76a074 295 Pfam PF00892 EamA-like transporter family 156 294 8.0E-15 T 21-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VFU_RS00175 2d3aacd5f1b197f8a9dbf7939f76a074 295 Pfam PF00892 EamA-like transporter family 5 134 1.1E-14 T 21-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VFU_RS08085 66849a00fc44c8aaaf4c128c527fc621 394 SUPERFAMILY SSF48695 12 187 4.65E-60 T 21-04-2016 IPR011031 Multihaem cytochrome VFU_RS08085 66849a00fc44c8aaaf4c128c527fc621 394 Gene3D G3DSA:1.10.3820.10 12 189 1.1E-28 T 21-04-2016 VFU_RS08085 66849a00fc44c8aaaf4c128c527fc621 394 Gene3D G3DSA:1.10.3820.10 339 345 1.1E-28 T 21-04-2016 VFU_RS08085 66849a00fc44c8aaaf4c128c527fc621 394 PANTHER PTHR30333:SF1 1 394 5.4E-277 T 21-04-2016 VFU_RS08085 66849a00fc44c8aaaf4c128c527fc621 394 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 16 187 1.7E-72 T 21-04-2016 IPR005126 NapC/NirT cytochrome c, N-terminal VFU_RS08085 66849a00fc44c8aaaf4c128c527fc621 394 PANTHER PTHR30333 1 394 5.4E-277 T 21-04-2016 VFU_RS08085 66849a00fc44c8aaaf4c128c527fc621 394 TIGRFAM TIGR02162 torC: trimethylamine-N-oxide reductase c-type cytochrome TorC 7 394 1.1E-195 T 21-04-2016 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 VFU_RS08085 66849a00fc44c8aaaf4c128c527fc621 394 PIRSF PIRSF000014 1 394 2.5E-167 T 21-04-2016 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 VFU_RS10555 65d0dc572856fa4227cbc2ba894e083e 227 PIRSF PIRSF028111 1 227 8.3E-82 T 21-04-2016 IPR016868 Bacteriophage B3, Orf5 VFU_RS10555 65d0dc572856fa4227cbc2ba894e083e 227 Pfam PF10979 Protein of unknown function (DUF2786) 5 42 2.7E-12 T 21-04-2016 IPR024498 Domain of unknown function DUF2786 VFU_RS01475 d840a4fa7b82a5ce1a289794a99293d4 188 Pfam PF11355 Protein of unknown function (DUF3157) 2 187 4.8E-71 T 21-04-2016 IPR021501 Protein of unknown function DUF3157 VFU_RS06840 c3ec71105e78383a089a0d69a101c6f3 175 PANTHER PTHR35011 1 158 4.4E-28 T 21-04-2016 VFU_RS06840 c3ec71105e78383a089a0d69a101c6f3 175 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 35 159 5.2E-29 T 21-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component VFU_RS18440 a8d309af3384b32263222012067f00b7 71 Pfam PF03958 Bacterial type II/III secretion system short domain 21 70 3.8E-7 T 21-04-2016 IPR005644 NolW-like VFU_RS02200 496ded88eff8dfa1af8c1ba0e3daed01 412 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 68 396 3.4E-110 T 21-04-2016 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX VFU_RS02200 496ded88eff8dfa1af8c1ba0e3daed01 412 PANTHER PTHR38043 32 410 7.4E-85 T 21-04-2016 VFU_RS11140 6caafe57b7cb6f4efbd02ef1bb5432dc 140 PANTHER PTHR36437:SF2 1 131 1.6E-56 T 21-04-2016 VFU_RS11140 6caafe57b7cb6f4efbd02ef1bb5432dc 140 PANTHER PTHR36437 1 131 1.6E-56 T 21-04-2016 VFU_RS11140 6caafe57b7cb6f4efbd02ef1bb5432dc 140 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 125 1.4E-16 T 21-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VFU_RS11140 6caafe57b7cb6f4efbd02ef1bb5432dc 140 SUPERFAMILY SSF54593 3 133 2.28E-27 T 21-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VFU_RS11140 6caafe57b7cb6f4efbd02ef1bb5432dc 140 Gene3D G3DSA:3.10.180.10 1 130 3.2E-24 T 21-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VFU_RS14815 73767b2eebc182809eb6a872a8db1d36 233 SUPERFAMILY SSF54060 24 231 1.65E-92 T 21-04-2016 VFU_RS14815 73767b2eebc182809eb6a872a8db1d36 233 PANTHER PTHR33607 2 227 8.6E-52 T 21-04-2016 VFU_RS14815 73767b2eebc182809eb6a872a8db1d36 233 Pfam PF04231 Endonuclease I 37 229 2.3E-43 T 21-04-2016 IPR007346 Endonuclease I GO:0004518 VFU_RS08065 b328e6752f81f22d2a331e6d445edb93 77 TIGRFAM TIGR02647 DNA: TIGR02647 family protein 1 77 8.9E-37 T 21-04-2016 IPR013468 Conserved hypothetical protein CHP02647 VFU_RS08065 b328e6752f81f22d2a331e6d445edb93 77 Pfam PF06146 Phosphate-starvation-inducible E 9 68 1.5E-9 T 21-04-2016 IPR020948 Phosphate-starvation-induced PsiE-like VFU_RS08065 b328e6752f81f22d2a331e6d445edb93 77 Gene3D G3DSA:1.10.290.10 34 68 6.4E-4 T 21-04-2016 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 VFU_RS00675 e2c09451edcf08b09896e7da57fca3ef 337 Pfam PF04230 Polysaccharide pyruvyl transferase 35 285 1.2E-13 T 21-04-2016 IPR007345 Polysaccharide pyruvyl transferase VFU_RS09095 4b2562e749a78b9e106fc616f7658ac5 175 Gene3D G3DSA:3.90.1720.10 53 168 2.6E-40 T 21-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VFU_RS09095 4b2562e749a78b9e106fc616f7658ac5 175 Pfam PF00877 NlpC/P60 family 63 167 6.7E-30 T 21-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VFU_RS09095 4b2562e749a78b9e106fc616f7658ac5 175 SUPERFAMILY SSF54001 54 168 2.94E-39 T 21-04-2016 VFU_RS09095 4b2562e749a78b9e106fc616f7658ac5 175 PANTHER PTHR21666 34 169 2.6E-36 T 21-04-2016 VFU_RS08965 4cb7fb18f12b8336893859beb59e06fd 276 PANTHER PTHR40041 1 276 8.2E-65 T 21-04-2016 VFU_RS08965 4cb7fb18f12b8336893859beb59e06fd 276 PANTHER PTHR40041:SF2 1 276 8.2E-65 T 21-04-2016 VFU_RS08965 4cb7fb18f12b8336893859beb59e06fd 276 Pfam PF02517 CAAX protease self-immunity 174 263 2.4E-18 T 21-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 VFU_RS10940 f3a06d66a218117b050b67f0d59165e1 279 PANTHER PTHR30244:SF1 2 278 2.7E-83 T 21-04-2016 VFU_RS10940 f3a06d66a218117b050b67f0d59165e1 279 PRINTS PR00207 Flagellin signature 76 95 2.7E-19 T 21-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VFU_RS10940 f3a06d66a218117b050b67f0d59165e1 279 PRINTS PR00207 Flagellin signature 37 54 2.7E-19 T 21-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VFU_RS10940 f3a06d66a218117b050b67f0d59165e1 279 PRINTS PR00207 Flagellin signature 111 134 2.7E-19 T 21-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VFU_RS10940 f3a06d66a218117b050b67f0d59165e1 279 PANTHER PTHR30244 2 278 2.7E-83 T 21-04-2016 VFU_RS10940 f3a06d66a218117b050b67f0d59165e1 279 Pfam PF00700 Bacterial flagellin C-terminal helical region 193 278 7.5E-20 T 21-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VFU_RS10940 f3a06d66a218117b050b67f0d59165e1 279 Pfam PF00669 Bacterial flagellin N-terminal helical region 6 139 1.2E-39 T 21-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VFU_RS10940 f3a06d66a218117b050b67f0d59165e1 279 Gene3D G3DSA:1.20.1330.10 55 234 4.5E-44 T 21-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VFU_RS10940 f3a06d66a218117b050b67f0d59165e1 279 SUPERFAMILY SSF64518 1 278 5.75E-71 T 21-04-2016 VFU_RS13785 ad1126b4caacaf9d72b04580b73a2deb 96 Pfam PF07130 YebG protein 1 72 1.7E-31 T 21-04-2016 IPR009813 Uncharacterised protein family YebG VFU_RS13785 ad1126b4caacaf9d72b04580b73a2deb 96 Gene3D G3DSA:1.10.10.710 20 86 2.0E-24 T 21-04-2016 IPR009813 Uncharacterised protein family YebG VFU_RS08830 544e206de2921218c99f4edcb9f63828 335 PANTHER PTHR32196 9 335 8.6E-220 T 21-04-2016 VFU_RS08830 544e206de2921218c99f4edcb9f63828 335 PANTHER PTHR32196:SF18 9 335 8.6E-220 T 21-04-2016 IPR030158 Galactoside transport system permease protein MglC GO:0008643|GO:0016021 VFU_RS08830 544e206de2921218c99f4edcb9f63828 335 Pfam PF02653 Branched-chain amino acid transport system / permease component 40 324 7.3E-48 T 21-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 VFU_RS02225 ef0422d3ec8094da4b006920ce7b0238 38 Pfam PF13627 Prokaryotic lipoprotein-attachment site 6 28 9.3E-11 T 21-04-2016 IPR032831 Prokaryotic lipoprotein-attachment site VFU_RS00505 b1154c87001e6f62483c7f8d13a48ded 308 SUPERFAMILY SSF51735 93 274 1.51E-41 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS00505 b1154c87001e6f62483c7f8d13a48ded 308 SUPERFAMILY SSF52283 27 106 3.29E-7 T 21-04-2016 VFU_RS00505 b1154c87001e6f62483c7f8d13a48ded 308 Gene3D G3DSA:3.40.50.720 87 274 4.5E-48 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS00505 b1154c87001e6f62483c7f8d13a48ded 308 PANTHER PTHR10996 1 304 9.7E-132 T 21-04-2016 VFU_RS00505 b1154c87001e6f62483c7f8d13a48ded 308 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 100 273 6.5E-42 T 21-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VFU_RS00505 b1154c87001e6f62483c7f8d13a48ded 308 PANTHER PTHR10996:SF148 1 304 9.7E-132 T 21-04-2016 VFU_RS12290 44ca2faa0cd4b5d503fa1411135d7393 217 Pfam PF16452 Bacteriophage CI repressor C-terminal domain 110 211 2.3E-27 T 21-04-2016 IPR032499 Bacteriophage CI repressor, C-terminal GO:0051259 VFU_RS12290 44ca2faa0cd4b5d503fa1411135d7393 217 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 18 79 1.3E-14 T 21-04-2016 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 VFU_RS01605 1129a7d6006b0d47a462ff363456893a 138 Gene3D G3DSA:3.10.50.30 47 121 4.4E-13 T 21-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VFU_RS01605 1129a7d6006b0d47a462ff363456893a 138 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 47 120 5.3E-10 T 21-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VFU_RS01605 1129a7d6006b0d47a462ff363456893a 138 SUPERFAMILY SSF54534 46 121 9.29E-11 T 21-04-2016 VFU_RS00190 c8787b1e6d31876d64699874898c4113 322 SUPERFAMILY SSF64182 4 318 4.32E-40 T 21-04-2016 VFU_RS13745 3f01fe1aca3f2d97e0c95ee1dc4177b6 146 Pfam PF11012 Protein of unknown function (DUF2850) 58 137 2.4E-32 T 21-04-2016 IPR021271 Protein of unknown function DUF2850 VFU_RS09090 d9bdff102a4d51ad66e8e8fbe1ed7b53 113 Pfam PF12290 Protein of unknown function (DUF3802) 2 109 1.0E-41 T 21-04-2016 IPR020979 Uncharacterised protein family A0KLC6 VFU_RS21515 7cc468902ed45d7ac99c66e79440dbd4 199 PANTHER PTHR11814:SF76 1 197 6.5E-54 T 21-04-2016 VFU_RS21515 7cc468902ed45d7ac99c66e79440dbd4 199 PANTHER PTHR11814 1 197 6.5E-54 T 21-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 VFU_RS21515 7cc468902ed45d7ac99c66e79440dbd4 199 Pfam PF00916 Sulfate permease family 10 196 2.8E-14 T 21-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 VFU_RS17195 773d8f8bc3ed127c25c45e7c298e6ed9 135 PANTHER PTHR32024:SF2 1 132 6.8E-78 T 21-04-2016 VFU_RS17195 773d8f8bc3ed127c25c45e7c298e6ed9 135 PANTHER PTHR32024 1 132 6.8E-78 T 21-04-2016 VFU_RS17195 773d8f8bc3ed127c25c45e7c298e6ed9 135 Pfam PF02386 Cation transport protein 1 128 2.2E-30 T 21-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 VFU_RS11315 f4f12af3d8a88c92f6bf27fa26561898 258 Pfam PF03609 PTS system sorbose-specific iic component 5 236 3.7E-71 T 21-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 VFU_RS11315 f4f12af3d8a88c92f6bf27fa26561898 258 PANTHER PTHR32502:SF8 1 258 2.3E-79 T 21-04-2016 VFU_RS11315 f4f12af3d8a88c92f6bf27fa26561898 258 PANTHER PTHR32502 1 258 2.3E-79 T 21-04-2016 VFU_RS04220 ca15439a13b3ec53ab81c69526cbb34b 209 Pfam PF00293 NUDIX domain 58 175 8.4E-12 T 21-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 VFU_RS04220 ca15439a13b3ec53ab81c69526cbb34b 209 PANTHER PTHR11839 1 209 2.1E-107 T 21-04-2016 VFU_RS04220 ca15439a13b3ec53ab81c69526cbb34b 209 PANTHER PTHR11839:SF5 1 209 2.1E-107 T 21-04-2016 VFU_RS04220 ca15439a13b3ec53ab81c69526cbb34b 209 Gene3D G3DSA:3.90.79.10 14 201 1.5E-55 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VFU_RS04220 ca15439a13b3ec53ab81c69526cbb34b 209 ProSitePatterns PS00893 Nudix box signature. 96 117 - T 21-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VFU_RS04220 ca15439a13b3ec53ab81c69526cbb34b 209 SUPERFAMILY SSF55811 9 206 1.62E-47 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VFU_RS04220 ca15439a13b3ec53ab81c69526cbb34b 209 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 14 198 1.9E-61 T 21-04-2016 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 VFU_RS05165 3105f686bf5958a63a2a1503342202b8 430 PANTHER PTHR11119 1 418 1.9E-173 T 21-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 VFU_RS05165 3105f686bf5958a63a2a1503342202b8 430 PANTHER PTHR11119:SF9 1 418 1.9E-173 T 21-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 VFU_RS05165 3105f686bf5958a63a2a1503342202b8 430 PIRSF PIRSF005353 1 430 5.0E-186 T 21-04-2016 IPR026033 Purine permease PbuG-like VFU_RS05165 3105f686bf5958a63a2a1503342202b8 430 Pfam PF00860 Permease family 17 390 4.7E-53 T 21-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 VFU_RS13410 10a8dff939a456ae4005c1a4b31e0a2f 262 SUPERFAMILY SSF101082 33 227 4.05E-34 T 21-04-2016 IPR023220 Type IV secretion system, VirB5-domain VFU_RS13410 10a8dff939a456ae4005c1a4b31e0a2f 262 TIGRFAM TIGR02780 TrbJ_Ti: P-type conjugative transfer protein TrbJ 16 260 7.6E-60 T 21-04-2016 IPR014147 Type IV conjugative transfer protein TrbJ VFU_RS01060 996a3003677a048074d5e28cb63396f8 111 Pfam PF11666 Protein of unknown function (DUF2933) 19 68 5.9E-21 T 21-04-2016 IPR021682 Protein of unknown function DUF2933 VFU_RS13825 a52b8f5b3a753040fdde99ea29da4b17 114 Gene3D G3DSA:2.40.50.140 7 113 1.2E-33 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS13825 a52b8f5b3a753040fdde99ea29da4b17 114 Pfam PF01588 Putative tRNA binding domain 18 111 6.7E-27 T 21-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 VFU_RS13825 a52b8f5b3a753040fdde99ea29da4b17 114 PANTHER PTHR11586 7 114 8.3E-61 T 21-04-2016 VFU_RS13825 a52b8f5b3a753040fdde99ea29da4b17 114 SUPERFAMILY SSF50249 11 113 8.32E-30 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold VFU_RS13825 a52b8f5b3a753040fdde99ea29da4b17 114 PANTHER PTHR11586:SF19 7 114 8.3E-61 T 21-04-2016 VFU_RS06290 47bc6e5b1ff0803d85b3709802d24385 248 Pfam PF01578 Cytochrome C assembly protein 27 184 4.1E-32 T 21-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 VFU_RS06290 47bc6e5b1ff0803d85b3709802d24385 248 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 204 228 1.6E-66 T 21-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VFU_RS06290 47bc6e5b1ff0803d85b3709802d24385 248 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 1.6E-66 T 21-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VFU_RS06290 47bc6e5b1ff0803d85b3709802d24385 248 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 1.6E-66 T 21-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VFU_RS06290 47bc6e5b1ff0803d85b3709802d24385 248 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 1.6E-66 T 21-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VFU_RS06290 47bc6e5b1ff0803d85b3709802d24385 248 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 1.6E-66 T 21-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VFU_RS06290 47bc6e5b1ff0803d85b3709802d24385 248 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 1.6E-66 T 21-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VFU_RS06290 47bc6e5b1ff0803d85b3709802d24385 248 PANTHER PTHR30071 1 224 2.3E-89 T 21-04-2016 VFU_RS06290 47bc6e5b1ff0803d85b3709802d24385 248 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 228 7.8E-87 T 21-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VFU_RS01030 11c371c62d3e5b808c992514d7ee7ec7 146 Pfam PF04214 Protein of unknown function, DUF 50 119 9.0E-29 T 21-04-2016 IPR007332 Protein of unknown function DUF411 VFU_RS12410 8739aed5ce1918f9b825ed207cb6a16a 429 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 17 429 2.9E-126 T 21-04-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VFU_RS12410 8739aed5ce1918f9b825ed207cb6a16a 429 Gene3D G3DSA:2.40.160.60 26 429 1.9E-123 T 21-04-2016 VFU_RS12410 8739aed5ce1918f9b825ed207cb6a16a 429 SUPERFAMILY SSF56935 26 429 8.55E-96 T 21-04-2016 VFU_RS12410 8739aed5ce1918f9b825ed207cb6a16a 429 PANTHER PTHR35093 3 429 1.2E-138 T 21-04-2016 VFU_RS12410 8739aed5ce1918f9b825ed207cb6a16a 429 PANTHER PTHR35093:SF2 3 429 1.2E-138 T 21-04-2016 VFU_RS14020 066c4636d01e7c1d8a406fe961913f73 183 Gene3D G3DSA:1.20.120.520 2 154 7.2E-18 T 21-04-2016 VFU_RS14020 066c4636d01e7c1d8a406fe961913f73 183 Pfam PF01814 Hemerythrin HHE cation binding domain 2 135 2.1E-13 T 21-04-2016 IPR012312 Haemerythrin-like VFU_RS02525 0e47850c50b00a3dcf6a76a6318d80b7 179 SUPERFAMILY SSF52540 4 169 9.25E-14 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS02525 0e47850c50b00a3dcf6a76a6318d80b7 179 Gene3D G3DSA:3.40.50.300 1 169 3.0E-23 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS02525 0e47850c50b00a3dcf6a76a6318d80b7 179 Pfam PF13521 AAA domain 4 164 3.5E-39 T 21-04-2016 VFU_RS00295 391bb370712fc669d0e40da70cbc9d40 128 Gene3D G3DSA:3.40.630.30 16 103 5.0E-11 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase VFU_RS00295 391bb370712fc669d0e40da70cbc9d40 128 Pfam PF13673 Acetyltransferase (GNAT) domain 7 98 3.1E-9 T 21-04-2016 IPR000182 GNAT domain GO:0008080 VFU_RS00295 391bb370712fc669d0e40da70cbc9d40 128 SUPERFAMILY SSF55729 11 97 1.34E-9 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase VFU_RS05485 430f95d8519abf74a4a91aef60579ff7 211 PIRSF PIRSF028688 1 211 3.3E-120 T 21-04-2016 IPR014549 Flagellar protein FlgO VFU_RS13880 c5d104babf2c6cd384123494adbb8225 143 Pfam PF07811 TadE-like protein 11 53 1.2E-10 T 21-04-2016 IPR012495 TadE-like VFU_RS11310 45c56efb95ec72e116eaf3fa119be010 293 PANTHER PTHR32502 24 293 1.3E-84 T 21-04-2016 VFU_RS11310 45c56efb95ec72e116eaf3fa119be010 293 PANTHER PTHR32502:SF6 24 293 1.3E-84 T 21-04-2016 VFU_RS11310 45c56efb95ec72e116eaf3fa119be010 293 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 37 293 1.9E-90 T 21-04-2016 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 VFU_RS10705 2633f3af0fdff5df6932c1a46cf8a7a5 107 Pfam PF11872 Protein of unknown function (DUF3392) 2 104 1.5E-39 T 21-04-2016 IPR021813 Protein of unknown function DUF3392 VFU_RS06085 c2d3246084c550416093df1ce9d7646c 73 Pfam PF10981 Protein of unknown function (DUF2788) 18 67 3.3E-18 T 21-04-2016 IPR021249 Protein of unknown function DUF2788 VFU_RS07945 6b867b5e75d68d93b494044a60d8811d 269 SUPERFAMILY SSF53474 10 262 1.29E-45 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold VFU_RS07945 6b867b5e75d68d93b494044a60d8811d 269 PRINTS PR00412 Epoxide hydrolase signature 237 259 4.3E-5 T 21-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VFU_RS07945 6b867b5e75d68d93b494044a60d8811d 269 PRINTS PR00412 Epoxide hydrolase signature 205 221 4.3E-5 T 21-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VFU_RS07945 6b867b5e75d68d93b494044a60d8811d 269 PRINTS PR00412 Epoxide hydrolase signature 24 42 4.3E-5 T 21-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VFU_RS07945 6b867b5e75d68d93b494044a60d8811d 269 Pfam PF00561 alpha/beta hydrolase fold 19 121 1.3E-20 T 21-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VFU_RS07945 6b867b5e75d68d93b494044a60d8811d 269 PANTHER PTHR10992 157 262 5.5E-39 T 21-04-2016 VFU_RS07945 6b867b5e75d68d93b494044a60d8811d 269 PANTHER PTHR10992 16 133 5.5E-39 T 21-04-2016 VFU_RS07945 6b867b5e75d68d93b494044a60d8811d 269 Gene3D G3DSA:3.40.50.1820 16 261 7.5E-44 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold VFU_RS14700 1c824d2146dc4ff5f5bb6ae3680c4025 81 Gene3D G3DSA:2.40.160.20 2 77 3.1E-18 T 21-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VFU_RS14700 1c824d2146dc4ff5f5bb6ae3680c4025 81 Pfam PF09411 Lipid A 3-O-deacylase (PagL) 14 77 5.9E-14 T 21-04-2016 IPR018550 Lipid A 3-O-deacylase-related VFU_RS20865 f9e6849fdd7286b6255af07a72775167 124 SUPERFAMILY SSF52218 4 119 2.17E-39 T 21-04-2016 IPR029039 Flavoprotein-like domain VFU_RS20865 f9e6849fdd7286b6255af07a72775167 124 PANTHER PTHR30546 7 116 3.1E-48 T 21-04-2016 VFU_RS20865 f9e6849fdd7286b6255af07a72775167 124 Gene3D G3DSA:3.40.50.360 4 117 2.9E-46 T 21-04-2016 IPR029039 Flavoprotein-like domain VFU_RS20865 f9e6849fdd7286b6255af07a72775167 124 Pfam PF03358 NADPH-dependent FMN reductase 14 91 2.4E-11 T 21-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 VFU_RS02825 21e437dd443a2cad789a7c01cc12db38 163 PANTHER PTHR35335:SF1 1 163 1.4E-38 T 21-04-2016 VFU_RS02825 21e437dd443a2cad789a7c01cc12db38 163 PANTHER PTHR35335 1 163 1.4E-38 T 21-04-2016 VFU_RS02825 21e437dd443a2cad789a7c01cc12db38 163 Pfam PF04186 FxsA cytoplasmic membrane protein 7 113 1.2E-34 T 21-04-2016 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 VFU_RS14260 b981109de6277b7601ecaaf562f414a1 584 Gene3D G3DSA:3.40.710.10 253 573 9.7E-87 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VFU_RS14260 b981109de6277b7601ecaaf562f414a1 584 SUPERFAMILY SSF56519 74 245 2.49E-43 T 21-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 VFU_RS14260 b981109de6277b7601ecaaf562f414a1 584 PANTHER PTHR30627 19 584 8.6E-223 T 21-04-2016 VFU_RS14260 b981109de6277b7601ecaaf562f414a1 584 SUPERFAMILY SSF56601 198 577 1.08E-89 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VFU_RS14260 b981109de6277b7601ecaaf562f414a1 584 Pfam PF00905 Penicillin binding protein transpeptidase domain 272 567 7.9E-75 T 21-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VFU_RS14260 b981109de6277b7601ecaaf562f414a1 584 Pfam PF03717 Penicillin-binding Protein dimerisation domain 79 232 6.8E-18 T 21-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 VFU_RS14260 b981109de6277b7601ecaaf562f414a1 584 Gene3D G3DSA:3.90.1310.10 153 252 2.0E-31 T 21-04-2016 VFU_RS14260 b981109de6277b7601ecaaf562f414a1 584 PANTHER PTHR30627:SF1 19 584 8.6E-223 T 21-04-2016 VFU_RS10405 ae551622ee34b9396d56d64c0893d7aa 258 Gene3D G3DSA:3.30.460.10 102 190 2.7E-6 T 21-04-2016 VFU_RS10405 ae551622ee34b9396d56d64c0893d7aa 258 SUPERFAMILY SSF81301 69 220 4.09E-14 T 21-04-2016 VFU_RS16145 6b25b16d01f3f85fa3466997e4230d7c 164 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 1 163 7.6E-74 T 21-04-2016 IPR010344 Exopolysaccharide biosynthesis protein YbjH VFU_RS13680 ad0a3ef1281ee0639e587447b46ad563 466 PANTHER PTHR30217:SF6 258 466 2.8E-235 T 21-04-2016 VFU_RS13680 ad0a3ef1281ee0639e587447b46ad563 466 PANTHER PTHR30217:SF6 2 211 2.8E-235 T 21-04-2016 VFU_RS13680 ad0a3ef1281ee0639e587447b46ad563 466 Pfam PF01136 Peptidase family U32 80 355 3.5E-95 T 21-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VFU_RS13680 ad0a3ef1281ee0639e587447b46ad563 466 ProSitePatterns PS01276 Peptidase family U32 signature. 167 185 - T 21-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VFU_RS13680 ad0a3ef1281ee0639e587447b46ad563 466 Pfam PF16325 Peptidase family U32 C-terminal domain 372 452 1.5E-20 T 21-04-2016 IPR032525 Peptidase family U32, C-terminal KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VFU_RS13680 ad0a3ef1281ee0639e587447b46ad563 466 PANTHER PTHR30217 258 466 2.8E-235 T 21-04-2016 VFU_RS13680 ad0a3ef1281ee0639e587447b46ad563 466 PANTHER PTHR30217 2 211 2.8E-235 T 21-04-2016 VFU_RS02020 09a0d3b2f5554fbd74a85cd13f16c657 141 SUPERFAMILY SSF52402 3 139 1.17E-33 T 21-04-2016 VFU_RS02020 09a0d3b2f5554fbd74a85cd13f16c657 141 PIRSF PIRSF006276 1 141 5.9E-53 T 21-04-2016 IPR006015 Universal stress protein A VFU_RS02020 09a0d3b2f5554fbd74a85cd13f16c657 141 Pfam PF00582 Universal stress protein family 3 138 6.8E-22 T 21-04-2016 IPR006016 UspA GO:0006950 VFU_RS02020 09a0d3b2f5554fbd74a85cd13f16c657 141 Gene3D G3DSA:3.40.50.620 3 139 2.3E-31 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VFU_RS12600 d44ada90bf163842e4ee21a209e88df7 163 Pfam PF02674 Colicin V production protein 4 142 3.9E-36 T 21-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 VFU_RS12600 d44ada90bf163842e4ee21a209e88df7 163 PANTHER PTHR36926:SF1 1 163 4.7E-81 T 21-04-2016 VFU_RS12600 d44ada90bf163842e4ee21a209e88df7 163 PANTHER PTHR36926 1 163 4.7E-81 T 21-04-2016 VFU_RS00550 ecb0f37e05653f39f6a22b4274a2040e 428 Pfam PF05159 Capsule polysaccharide biosynthesis protein 114 403 9.5E-26 T 21-04-2016 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 VFU_RS05430 e7807b6662ea9eeab4db797aad831ee5 70 Pfam PF11346 Protein of unknown function (DUF3149) 28 67 1.1E-15 T 21-04-2016 IPR021494 Protein of unknown function DUF3149 VFU_RS09510 4a9ad1d46d3c0dc3490591f027aec0c2 160 Pfam PF14539 Domain of unknown function (DUF4442) 17 105 6.9E-7 T 21-04-2016 IPR027961 Protein of unknown function DUF4442 VFU_RS09510 4a9ad1d46d3c0dc3490591f027aec0c2 160 SUPERFAMILY SSF54637 12 156 2.72E-14 T 21-04-2016 IPR029069 HotDog domain VFU_RS09510 4a9ad1d46d3c0dc3490591f027aec0c2 160 Gene3D G3DSA:3.10.129.10 11 156 1.1E-25 T 21-04-2016 IPR029069 HotDog domain VFU_RS08330 b618482411c081caca0477b6192d21f0 453 PANTHER PTHR42002 1 451 4.1E-87 T 21-04-2016 VFU_RS08330 b618482411c081caca0477b6192d21f0 453 Pfam PF03606 C4-dicarboxylate anaerobic carrier 9 451 9.4E-73 T 21-04-2016 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 VFU_RS08330 b618482411c081caca0477b6192d21f0 453 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 56 442 2.7E-97 T 21-04-2016 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 VFU_RS08330 b618482411c081caca0477b6192d21f0 453 PANTHER PTHR42002:SF2 1 451 4.1E-87 T 21-04-2016 VFU_RS11660 78ce73e6eede1921137c695971037075 129 Pfam PF07233 Protein of unknown function (DUF1425) 35 125 1.8E-30 T 21-04-2016 IPR010824 Protein of unknown function DUF1425 VFU_RS00780 1c97e29cacb5f90bf4a0fdf4d3b32cd0 237 Gene3D G3DSA:1.10.510.10 144 225 3.2E-15 T 21-04-2016 VFU_RS00780 1c97e29cacb5f90bf4a0fdf4d3b32cd0 237 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 2 235 42.449 T 21-04-2016 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676|UniPathway: UPA00958 VFU_RS00780 1c97e29cacb5f90bf4a0fdf4d3b32cd0 237 SUPERFAMILY SSF56112 47 235 8.77E-20 T 21-04-2016 IPR011009 Protein kinase-like domain VFU_RS00780 1c97e29cacb5f90bf4a0fdf4d3b32cd0 237 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 31 233 1.1E-68 T 21-04-2016 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 VFU_RS06905 192f0fe8b26180bb25d57b8538f42977 167 Pfam PF03748 Flagellar basal body-associated protein FliL 68 167 4.0E-16 T 21-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 VFU_RS06905 192f0fe8b26180bb25d57b8538f42977 167 PANTHER PTHR35091 11 167 1.5E-13 T 21-04-2016 VFU_RS10695 02e898a20b20a665881fcb5c3dcb80cd 400 Gene3D G3DSA:1.20.1250.20 214 393 9.2E-13 T 21-04-2016 VFU_RS10695 02e898a20b20a665881fcb5c3dcb80cd 400 Gene3D G3DSA:1.20.1250.20 10 189 2.6E-11 T 21-04-2016 VFU_RS10695 02e898a20b20a665881fcb5c3dcb80cd 400 Pfam PF07690 Major Facilitator Superfamily 15 333 5.5E-13 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VFU_RS10695 02e898a20b20a665881fcb5c3dcb80cd 400 SUPERFAMILY SSF103473 3 391 2.35E-34 T 21-04-2016 IPR020846 Major facilitator superfamily domain VFU_RS10710 7c24ca23e8236056e9988ac9fa5024ad 255 PANTHER PTHR30336 1 217 1.2E-96 T 21-04-2016 VFU_RS10710 7c24ca23e8236056e9988ac9fa5024ad 255 PANTHER PTHR30336:SF0 1 217 1.2E-96 T 21-04-2016 VFU_RS10710 7c24ca23e8236056e9988ac9fa5024ad 255 Gene3D G3DSA:3.40.50.620 54 178 1.1E-7 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VFU_RS10710 7c24ca23e8236056e9988ac9fa5024ad 255 Pfam PF02698 DUF218 domain 59 195 4.3E-19 T 21-04-2016 IPR003848 Domain of unknown function DUF218 VFU_RS01195 dc6a5084016d2de65aeb4314b893a6b9 152 Pfam PF07681 DoxX 23 104 6.0E-17 T 21-04-2016 IPR032808 DoxX family VFU_RS09680 2229e87683489231c870be5040dc1126 437 SUPERFAMILY SSF56935 103 181 6.87E-5 T 21-04-2016 VFU_RS09680 2229e87683489231c870be5040dc1126 437 Pfam PF06629 MltA-interacting protein MipA 47 239 2.4E-17 T 21-04-2016 IPR010583 MltA-interacting MipA VFU_RS06315 680ede8e65f9bd5267391a7efa653744 161 PANTHER PTHR30009 12 154 3.3E-38 T 21-04-2016 VFU_RS06315 680ede8e65f9bd5267391a7efa653744 161 Pfam PF03918 Cytochrome C biogenesis protein 9 151 1.1E-55 T 21-04-2016 IPR005616 CcmH/CycL/Ccl2/NrfF family VFU_RS06315 680ede8e65f9bd5267391a7efa653744 161 PANTHER PTHR30009:SF6 12 154 3.3E-38 T 21-04-2016 VFU_RS13205 d831e3c4cd99214918fd0007417e98f7 519 PANTHER PTHR30282 5 518 0.0 T 21-04-2016 VFU_RS13205 d831e3c4cd99214918fd0007417e98f7 519 Pfam PF03806 AbgT putative transporter family 20 517 6.3E-211 T 21-04-2016 IPR004697 p-aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 VFU_RS13205 d831e3c4cd99214918fd0007417e98f7 519 PANTHER PTHR30282:SF1 5 518 0.0 T 21-04-2016 VFU_RS06335 10d8702f3e74afa66c5abdf7d766e501 167 Pfam PF11993 Ribosomal S4P (gammaproteobacterial) 1 163 8.2E-64 T 21-04-2016 IPR021879 Ribosomal S4P (gammaproteobacterial) VFU_RS13005 435eca724501a6d2ab7a638edebf0210 258 PIRSF PIRSF029037 1 258 5.4E-114 T 21-04-2016 IPR016908 Uncharacterised conserved protein UCP029037 VFU_RS13005 435eca724501a6d2ab7a638edebf0210 258 Pfam PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) 1 256 4.7E-113 T 21-04-2016 IPR016908 Uncharacterised conserved protein UCP029037 VFU_RS12260 4cd2054063de1386a731bd77705ae227 78 SUPERFAMILY SSF63999 4 55 1.83E-8 T 21-04-2016 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356 VFU_RS12260 4cd2054063de1386a731bd77705ae227 78 Gene3D G3DSA:3.40.50.10240 4 54 2.6E-7 T 21-04-2016 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356 VFU_RS06265 b21a8fb0ccae36cf66707f782df04352 329 SMART SM00260 181 315 2.3E-4 T 21-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VFU_RS06265 b21a8fb0ccae36cf66707f782df04352 329 PIRSF PIRSF020479 4 329 8.7E-123 T 21-04-2016 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like VFU_RS06265 b21a8fb0ccae36cf66707f782df04352 329 Pfam PF01584 CheW-like domain 185 317 2.5E-13 T 21-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VFU_RS06265 b21a8fb0ccae36cf66707f782df04352 329 SUPERFAMILY SSF50341 181 317 2.75E-14 T 21-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VFU_RS14675 c64f6a1481a5cb481da6ec3345b901d1 290 Gene3D G3DSA:1.10.10.10 6 61 1.5E-4 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VFU_RS14675 c64f6a1481a5cb481da6ec3345b901d1 290 Pfam PF13280 WYL domain 120 285 4.0E-18 T 21-04-2016 IPR026881 WYL domain VFU_RS10605 e96e6440f0825c1574c465983d0877da 425 Pfam PF01266 FAD dependent oxidoreductase 29 379 5.0E-52 T 21-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VFU_RS10605 e96e6440f0825c1574c465983d0877da 425 SUPERFAMILY SSF51905 6 121 3.11E-44 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS10605 e96e6440f0825c1574c465983d0877da 425 SUPERFAMILY SSF51905 175 313 3.11E-44 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS10605 e96e6440f0825c1574c465983d0877da 425 Gene3D G3DSA:3.50.50.60 171 251 6.4E-49 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS10605 e96e6440f0825c1574c465983d0877da 425 Gene3D G3DSA:3.50.50.60 16 118 6.4E-49 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS10605 e96e6440f0825c1574c465983d0877da 425 Gene3D G3DSA:3.50.50.60 343 399 6.4E-49 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VFU_RS10605 e96e6440f0825c1574c465983d0877da 425 PANTHER PTHR13847:SF210 5 425 2.3E-198 T 21-04-2016 VFU_RS10605 e96e6440f0825c1574c465983d0877da 425 PANTHER PTHR13847 5 425 2.3E-198 T 21-04-2016 VFU_RS01600 24a941741f0fd8fb2ffe9ea087f72735 145 Pfam PF00011 Hsp20/alpha crystallin family 43 137 1.4E-20 T 21-04-2016 IPR002068 Alpha crystallin/Hsp20 domain VFU_RS01600 24a941741f0fd8fb2ffe9ea087f72735 145 SUPERFAMILY SSF49764 6 138 7.67E-23 T 21-04-2016 IPR008978 HSP20-like chaperone VFU_RS01600 24a941741f0fd8fb2ffe9ea087f72735 145 PANTHER PTHR11527:SF145 1 144 7.6E-47 T 21-04-2016 VFU_RS01600 24a941741f0fd8fb2ffe9ea087f72735 145 Gene3D G3DSA:2.60.40.790 4 137 5.4E-18 T 21-04-2016 IPR008978 HSP20-like chaperone VFU_RS01600 24a941741f0fd8fb2ffe9ea087f72735 145 PANTHER PTHR11527 1 144 7.6E-47 T 21-04-2016 IPR031107 Small heat shock protein HSP20 VFU_RS03530 703eb2325e48fa82ce0d76ab999f1382 1251 PANTHER PTHR36985 1 1251 9.5E-296 T 21-04-2016 VFU_RS03530 703eb2325e48fa82ce0d76ab999f1382 1251 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 914 1250 1.3E-62 T 21-04-2016 IPR007452 Translocation and assembly module TamB VFU_RS12280 025eefdead4f6e39210ed4c6efff171a 179 Pfam PF06892 Phage regulatory protein CII (CP76) 11 169 5.2E-61 T 21-04-2016 IPR009679 Bacteriophage 186, CII VFU_RS05015 e3ae1529b0effea07169427ad9e9ea9e 110 SUPERFAMILY SSF55331 1 110 3.97E-37 T 21-04-2016 IPR014347 Tautomerase/MIF superfamily VFU_RS05015 e3ae1529b0effea07169427ad9e9ea9e 110 Gene3D G3DSA:3.30.429.10 1 110 4.3E-45 T 21-04-2016 VFU_RS05015 e3ae1529b0effea07169427ad9e9ea9e 110 Pfam PF08921 Domain of unknown function (DUF1904) 1 109 3.7E-38 T 21-04-2016 IPR015017 Protein of unknown function DUF1904 VFU_RS03875 e42a340f6a3496bae030bbc655133424 218 Pfam PF01810 LysE type translocator 15 199 1.1E-14 T 21-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VFU_RS03875 e42a340f6a3496bae030bbc655133424 218 PANTHER PTHR30086 1 214 9.3E-20 T 21-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VFU_RS14200 dacd810b3bdaba87ce74b6ed3fe72d8c 152 Pfam PF05258 Protein of unknown function (DUF721) 12 89 1.0E-10 T 21-04-2016 IPR007922 Protein of unknown function DUF721/UPF0232 VFU_RS13010 c88fda2501f762ff6e3c5e8ffb566054 181 Pfam PF07348 Syd protein (SUKH-2) 7 179 4.1E-69 T 21-04-2016 IPR009948 Syd GO:0009898 VFU_RS13010 c88fda2501f762ff6e3c5e8ffb566054 181 Hamap MF_01104 Protein Syd [syd]. 3 181 37.286 T 21-04-2016 IPR009948 Syd GO:0009898 VFU_RS04265 682ba59cd75621f89b95ca5a1331ea96 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 212 223 1.5E-29 T 21-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- VFU_RS04265 682ba59cd75621f89b95ca5a1331ea96 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 201 211 1.5E-29 T 21-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- VFU_RS04265 682ba59cd75621f89b95ca5a1331ea96 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 143 160 1.5E-29 T 21-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- VFU_RS04265 682ba59cd75621f89b95ca5a1331ea96 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 224 239 1.5E-29 T 21-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- VFU_RS04265 682ba59cd75621f89b95ca5a1331ea96 289 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 17 124 1.2E-32 T 21-04-2016 IPR010627 Peptidase A24A, N-terminal KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- VFU_RS04265 682ba59cd75621f89b95ca5a1331ea96 289 Pfam PF01478 Type IV leader peptidase family 135 244 2.4E-26 T 21-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 VFU_RS04265 682ba59cd75621f89b95ca5a1331ea96 289 PANTHER PTHR30487:SF0 1 35 4.3E-110 T 21-04-2016 VFU_RS04265 682ba59cd75621f89b95ca5a1331ea96 289 PANTHER PTHR30487:SF0 57 283 4.3E-110 T 21-04-2016 VFU_RS04265 682ba59cd75621f89b95ca5a1331ea96 289 PANTHER PTHR30487 1 35 4.3E-110 T 21-04-2016 VFU_RS04265 682ba59cd75621f89b95ca5a1331ea96 289 PANTHER PTHR30487 57 283 4.3E-110 T 21-04-2016 VFU_RS05450 f9c11f158bbc0dc0b60bc782d1f7f21e 147 Pfam PF04214 Protein of unknown function, DUF 48 117 7.2E-33 T 21-04-2016 IPR007332 Protein of unknown function DUF411 VFU_RS10575 a2021ac7ba087d92f7152d6f9617bf43 131 Gene3D G3DSA:3.40.50.300 30 119 3.0E-6 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VFU_RS11465 e310315d4107b82ad5641990c7fe153d 217 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 31 212 5.0E-33 T 21-04-2016 IPR018635 Uncharacterised protein family UPF0319 VFU_RS03865 cabc7ca0621957164f9288bf6ead9b33 206 Gene3D G3DSA:1.10.10.60 64 88 4.1E-5 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 VFU_RS09425 86d7554184bda9f4ae2cddcd1af046fe 66 Pfam PF05768 Glutaredoxin-like domain (DUF836) 2 58 3.3E-10 T 21-04-2016 IPR008554 Glutaredoxin-like VFU_RS09425 86d7554184bda9f4ae2cddcd1af046fe 66 Gene3D G3DSA:3.40.30.10 2 65 1.8E-17 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS09425 86d7554184bda9f4ae2cddcd1af046fe 66 PANTHER PTHR34386 1 64 4.8E-20 T 21-04-2016 VFU_RS09425 86d7554184bda9f4ae2cddcd1af046fe 66 PANTHER PTHR34386:SF2 1 64 4.8E-20 T 21-04-2016 VFU_RS09425 86d7554184bda9f4ae2cddcd1af046fe 66 SUPERFAMILY SSF52833 1 60 7.16E-5 T 21-04-2016 IPR012336 Thioredoxin-like fold VFU_RS15315 0c5a7042f5f75d167a728b3e239d51c0 69 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 3 64 3.5E-16 T 21-04-2016 IPR014318 Phage shock protein, PspG VFU_RS15315 0c5a7042f5f75d167a728b3e239d51c0 69 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 1 64 6.2E-23 T 21-04-2016 IPR014318 Phage shock protein, PspG VFU_RS09265 40ed4ccc4568a2e60c233fcc688a55dc 220 Pfam PF11205 Protein of unknown function (DUF2987) 23 166 2.5E-54 T 21-04-2016 IPR021370 Protein of unknown function DUF2987 VFU_RS07910 a66e7f9b066d1fcdb9defc9ebdc90f85 151 PANTHER PTHR35603 20 148 1.7E-24 T 21-04-2016 VFU_RS07910 a66e7f9b066d1fcdb9defc9ebdc90f85 151 Pfam PF05433 Glycine zipper 2TM domain 56 92 1.9E-10 T 21-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 VFU_RS09910 f04900e9b9e5d7786225181bafcb1637 323 Pfam PF01699 Sodium/calcium exchanger protein 174 318 3.7E-32 T 21-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 VFU_RS09910 f04900e9b9e5d7786225181bafcb1637 323 Pfam PF01699 Sodium/calcium exchanger protein 4 140 1.1E-22 T 21-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 VFU_RS09910 f04900e9b9e5d7786225181bafcb1637 323 PANTHER PTHR10846 19 319 1.7E-52 T 21-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 VFU_RS09910 f04900e9b9e5d7786225181bafcb1637 323 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 2 313 5.4E-67 T 21-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 VFU_RS09310 f6792870366374b1986feb872898a2e1 57 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 6 45 9.7E-15 T 21-04-2016 IPR008621 Cbb3-type cytochrome oxidase component VFU_RS09555 1b49f4ad13d2f5edaf883c2faaab2977 260 Pfam PF11153 Protein of unknown function (DUF2931) 13 237 1.2E-50 T 21-04-2016 IPR021326 Protein of unknown function DUF2931 VFU_RS06640 03ba382dea49ad6663ac4d43ce6102f3 203 SMART SM01144 1 190 6.1E-72 T 21-04-2016 IPR005636 DTW VFU_RS06640 03ba382dea49ad6663ac4d43ce6102f3 203 Pfam PF03942 DTW domain 3 185 9.7E-49 T 21-04-2016 IPR005636 DTW VFU_RS06640 03ba382dea49ad6663ac4d43ce6102f3 203 PANTHER PTHR21392 1 189 9.8E-51 T 21-04-2016 VFU_RS09300 0fdf3aab5d5e4489c3995886cccdd1d2 160 Pfam PF05751 FixH 7 147 4.0E-42 T 21-04-2016 IPR008620 Nitrogen fixation protein FixH VFU_RS08160 52fcd856e318494e7b873328cb722ff8 77 Pfam PF06667 Phage shock protein B 4 74 4.4E-31 T 21-04-2016 IPR009554 Phage shock protein B GO:0006355|GO:0009271 VFU_RS08160 52fcd856e318494e7b873328cb722ff8 77 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 74 4.7E-32 T 21-04-2016 IPR009554 Phage shock protein B GO:0006355|GO:0009271 VFU_RS09415 726385a31dbe433feec36914b9c82a5a 579 Pfam PF11949 Protein of unknown function (DUF3466) 5 228 2.1E-7 T 21-04-2016 IPR022562 Protein of unknown function DUF3466 VFU_RS09415 726385a31dbe433feec36914b9c82a5a 579 Pfam PF11949 Protein of unknown function (DUF3466) 295 579 1.4E-52 T 21-04-2016 IPR022562 Protein of unknown function DUF3466 VFU_RS01730 23c029b09b623265a5b35984c5512a92 168 Pfam PF15941 FidL-like putative membrane protein 75 164 7.8E-31 T 21-04-2016 IPR031854 Putative membrane protein FidL-like VFU_RS11060 9e9433e018a5758e0bc64d936e8b1acb 89 PANTHER PTHR34040 1 89 2.7E-31 T 21-04-2016 VFU_RS11060 9e9433e018a5758e0bc64d936e8b1acb 89 PANTHER PTHR34040:SF2 1 89 2.7E-31 T 21-04-2016 VFU_RS11060 9e9433e018a5758e0bc64d936e8b1acb 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 4.5E-14 T 21-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VFU_RS11060 9e9433e018a5758e0bc64d936e8b1acb 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 4.5E-14 T 21-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VFU_RS11060 9e9433e018a5758e0bc64d936e8b1acb 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 4.5E-14 T 21-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VFU_RS11060 9e9433e018a5758e0bc64d936e8b1acb 89 PIRSF PIRSF004669 1 89 5.9E-26 T 21-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VFU_RS11060 9e9433e018a5758e0bc64d936e8b1acb 89 Pfam PF01313 Bacterial export proteins, family 3 7 77 1.3E-23 T 21-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VFU_RS00575 0ff478c18f5c7c3eec457b2593de9943 371 Pfam PF03023 MviN-like protein 4 363 3.7E-12 T 21-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VFU_RS06020 828c89d3cec7185c5b48b0d553c3359d 176 Pfam PF04315 Elongation factor P hydroxylase 11 173 2.0E-72 T 21-04-2016 IPR007411 Elongation factor P hydroxylase KEGG: 00053+1.14.-.-|KEGG: 00073+1.14.-.-|KEGG: 00130+1.14.-.-|KEGG: 00253+1.14.-.-|KEGG: 00361+1.14.-.-|KEGG: 00363+1.14.-.-|KEGG: 00380+1.14.-.-|KEGG: 00522+1.14.-.-|KEGG: 00600+1.14.-.-|KEGG: 00624+1.14.-.-|KEGG: 00625+1.14.-.-|KEGG: 00627+1.14.-.-|KEGG: 00903+1.14.-.-|KEGG: 00904+1.14.-.-|KEGG: 00905+1.14.-.-|KEGG: 00906+1.14.-.-|KEGG: 00940+1.14.-.-|KEGG: 00945+1.14.-.-|KEGG: 00966+1.14.-.-|KEGG: 00981+1.14.-.- VFU_RS01065 254afef4b2947340a6267294a43cc257 211 PANTHER PTHR12714 7 211 6.0E-22 T 21-04-2016 VFU_RS01065 254afef4b2947340a6267294a43cc257 211 Pfam PF04191 Phospholipid methyltransferase 119 193 1.5E-7 T 21-04-2016 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|UniPathway: UPA00753 VFU_RS22790 736c60a219906a8285a4a2bc60882684 789 Pfam PF12571 Phage tail-collar fibre protein 7 160 1.5E-29 T 21-04-2016 IPR022225 Phage tail fibre protein VFU_RS11875 b8a09fd24178b8b7353fad5c3523f240 231 Pfam PF01066 CDP-alcohol phosphatidyltransferase 34 105 1.3E-8 T 21-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VFU_RS07230 4108c0eea5c4f1a126b31ba23a73abec 141 Pfam PF07681 DoxX 19 98 3.7E-19 T 21-04-2016 IPR032808 DoxX family VFU_RS07230 4108c0eea5c4f1a126b31ba23a73abec 141 PANTHER PTHR33452 1 136 8.8E-14 T 21-04-2016 VFU_RS05745 370f10cbad0ce8aa0ca1649a54606948 143 Pfam PF09842 Predicted membrane protein (DUF2069) 15 117 1.5E-33 T 21-04-2016 IPR018643 Protein of unknown function DUF2069, membrane VFU_RS08635 574fc066dc0105a8d183c7efa3a88fc1 205 SUPERFAMILY SSF56925 40 172 4.97E-8 T 21-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VFU_RS08635 574fc066dc0105a8d183c7efa3a88fc1 205 Gene3D G3DSA:2.40.160.20 39 158 3.2E-7 T 21-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VFU_RS11265 d8b08aa53138da0533d4d03be8a12dea 91 Pfam PF07383 Protein of unknown function (DUF1496) 39 86 8.1E-21 T 21-04-2016 IPR009971 Protein of unknown function DUF1496 VFU_RS11010 a39e0ac3d08ae9a34e15ba63ac88ee67 237 PANTHER PTHR34933:SF2 16 237 2.6E-81 T 21-04-2016 VFU_RS11010 a39e0ac3d08ae9a34e15ba63ac88ee67 237 Hamap MF_00415 Flagellar L-ring protein [flgH]. 14 234 25.893 T 21-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VFU_RS11010 a39e0ac3d08ae9a34e15ba63ac88ee67 237 Pfam PF02107 Flagellar L-ring protein 61 235 1.4E-59 T 21-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VFU_RS11010 a39e0ac3d08ae9a34e15ba63ac88ee67 237 PRINTS PR01008 Flagellar L-ring protein signature 82 94 2.6E-21 T 21-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VFU_RS11010 a39e0ac3d08ae9a34e15ba63ac88ee67 237 PRINTS PR01008 Flagellar L-ring protein signature 150 165 2.6E-21 T 21-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VFU_RS11010 a39e0ac3d08ae9a34e15ba63ac88ee67 237 PRINTS PR01008 Flagellar L-ring protein signature 176 192 2.6E-21 T 21-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VFU_RS11010 a39e0ac3d08ae9a34e15ba63ac88ee67 237 PRINTS PR01008 Flagellar L-ring protein signature 197 211 2.6E-21 T 21-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VFU_RS11010 a39e0ac3d08ae9a34e15ba63ac88ee67 237 PRINTS PR01008 Flagellar L-ring protein signature 213 227 2.6E-21 T 21-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VFU_RS11010 a39e0ac3d08ae9a34e15ba63ac88ee67 237 PANTHER PTHR34933 16 237 2.6E-81 T 21-04-2016 VFU_RS13390 79f23c389a35a1fd3aa1f85fd507e1ce 79 Pfam PF12703 Toxin of toxin-antitoxin type 1 system 1 71 2.7E-38 T 21-04-2016 IPR024640 Toxin-antitoxin type 1 system, toxin component VFU_RS05090 8571d8962081cc92eede9f52765cc692 77 Pfam PF10982 Protein of unknown function (DUF2789) 1 75 2.0E-31 T 21-04-2016 IPR021250 Protein of unknown function DUF2789 VFU_RS05355 2f56db91b16ade11bb9d20f2dce677f8 228 Pfam PF06930 Protein of unknown function (DUF1282) 14 223 1.4E-42 T 21-04-2016 IPR009698 Protein of unknown function DUF1282 VFU_RS11630 501b47459bb298a2b10b7def5fd66234 258 Pfam PF10972 Peptidoglycan-binding protein, CsiV 5 255 1.1E-65 T 21-04-2016 IPR021241 Peptidoglycan-binding protein, CsiV VFU_RS03775 29c04018ca4d4d808ddf703df661a664 356 Gene3D G3DSA:3.30.1370.30 231 270 3.6E-4 T 21-04-2016 VFU_RS01075 ce27acc1187064e8f8fa4dace46f2efd 351 Pfam PF06958 S-type Pyocin 255 324 8.1E-11 T 21-04-2016 IPR016128 Pyosin/cloacin translocation domain GO:0009405 VFU_RS01075 ce27acc1187064e8f8fa4dace46f2efd 351 ProDom PD007225 IMMUNITY COLICIN BACTERIOCIN PLASMID PROTEIN/PYOCIN ORFU3 ORFU1 PYOCIN 3D-STRUCTURE GENES 330 351 6.0E-4 T 21-04-2016 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 VFU_RS12135 9fd1686ae30f160b5ff589caeccd9a31 200 Pfam PF09684 Phage tail protein (Tail_P2_I) 20 106 3.3E-5 T 21-04-2016 IPR006521 Tail protein I VFU_RS00210 1cd0b924792690686f4f787eec412c69 164 PIRSF PIRSF016548 3 164 1.1E-66 T 21-04-2016 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 VFU_RS00210 1cd0b924792690686f4f787eec412c69 164 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 3 154 2.6E-55 T 21-04-2016 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 VFU_RS15070 16c858e9803e5cbd1f2f2478c8e468af 129 Pfam PF09834 Predicted membrane protein (DUF2061) 1 52 1.9E-22 T 21-04-2016 IPR018638 Domain of unknown function DUF2061, membrane VFU_RS15070 16c858e9803e5cbd1f2f2478c8e468af 129 Pfam PF09834 Predicted membrane protein (DUF2061) 66 116 4.8E-22 T 21-04-2016 IPR018638 Domain of unknown function DUF2061, membrane VFU_RS12060 7a825618dba21f2d107328f9a8a86955 273 Pfam PF11207 Protein of unknown function (DUF2989) 16 218 2.3E-75 T 21-04-2016 IPR021372 Protein of unknown function DUF2989 VFU_RS10670 62b090680d6bac389d6d9048cc304390 161 SUPERFAMILY SSF54909 16 87 1.27E-5 T 21-04-2016 IPR011008 Dimeric alpha-beta barrel VFU_RS10670 62b090680d6bac389d6d9048cc304390 161 Pfam PF16157 Domain of unknown function (DUF4865) 1 104 1.3E-39 T 21-04-2016 IPR032349 Protein of unknown function DUF4865 VFU_RS13325 89d1c8a7e8a680b738ea757846d2c129 318 PANTHER PTHR10361 1 300 8.4E-93 T 21-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 VFU_RS13325 89d1c8a7e8a680b738ea757846d2c129 318 Pfam PF01758 Sodium Bile acid symporter family 36 213 2.0E-36 T 21-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 VFU_RS07740 21d5f5a08e43e6a4bf14b043d2026ee3 139 SUPERFAMILY SSF54427 5 131 5.32E-25 T 21-04-2016 IPR032710 NTF2-like domain VFU_RS07740 21d5f5a08e43e6a4bf14b043d2026ee3 139 Pfam PF12680 SnoaL-like domain 6 108 3.1E-15 T 21-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain VFU_RS07740 21d5f5a08e43e6a4bf14b043d2026ee3 139 Gene3D G3DSA:3.10.450.50 5 134 3.5E-23 T 21-04-2016 IPR032710 NTF2-like domain VFU_RS02185 62ac365b0d1708ea4e22d4cd3974b8fb 162 Pfam PF10675 Protein of unknown function (DUF2489) 14 146 4.0E-45 T 21-04-2016 IPR019617 Domain of unknown function DUF2489 VFU_RS13265 9c4eb1ea07244f8b916a3547ff52a515 119 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 7 110 33.529 T 21-04-2016 IPR026592 Outer membrane protein assembly factor BamE VFU_RS13265 9c4eb1ea07244f8b916a3547ff52a515 119 PANTHER PTHR37482:SF1 1 119 5.5E-49 T 21-04-2016 VFU_RS13265 9c4eb1ea07244f8b916a3547ff52a515 119 Pfam PF04355 SmpA / OmlA family 35 104 6.2E-26 T 21-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 VFU_RS13265 9c4eb1ea07244f8b916a3547ff52a515 119 PANTHER PTHR37482 1 119 5.5E-49 T 21-04-2016 VFU_RS06025 1ed606625733bbaaba020bfc84eebb74 87 Pfam PF08891 YfcL protein 4 84 1.8E-30 T 21-04-2016 IPR014987 Uncharacterised protein family YfcL VFU_RS03810 c3760d0f26f6ab4aa21ca61e05f5fdd0 143 PANTHER PTHR38978:SF2 1 143 2.0E-45 T 21-04-2016 VFU_RS03810 c3760d0f26f6ab4aa21ca61e05f5fdd0 143 Pfam PF10980 Protein of unknown function (DUF2787) 17 141 1.1E-39 T 21-04-2016 IPR021248 Protein of unknown function DUF2787 VFU_RS03810 c3760d0f26f6ab4aa21ca61e05f5fdd0 143 PANTHER PTHR38978 1 143 2.0E-45 T 21-04-2016 VFU_RS13460 45d57a8bd35e98d5d5f8e3eac26982b5 294 SUPERFAMILY SSF55186 123 272 4.53E-14 T 21-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 VFU_RS09900 bf2cebebbc21cd03d1358ea51baf35c8 106 Pfam PF08895 Domain of unknown function (DUF1840) 1 102 4.1E-33 T 21-04-2016 IPR014991 Protein of unknown function DUF1840 VFU_RS10165 c5613423e9af9fde4a4b52f5ebc1d1a2 116 Pfam PF11042 Protein of unknown function (DUF2750) 13 113 4.0E-32 T 21-04-2016 IPR021284 Protein of unknown function DUF2750 VFU_RS02365 e5291a58b8f31cce3d482273ff287919 322 Pfam PF02687 FtsX-like permease family 199 317 5.4E-12 T 21-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 VFU_RS02365 e5291a58b8f31cce3d482273ff287919 322 PIRSF PIRSF003097 23 318 8.9E-63 T 21-04-2016 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 VFU_RS12250 a38ad34745892c006ce1ce2dc0d41e9e 140 Gene3D G3DSA:1.20.120.330 24 126 3.0E-6 T 21-04-2016 VFU_RS15125 d3610fb46b4dd42b09bb5594b4bbc2d5 875 Gene3D G3DSA:2.60.40.920 158 249 2.2E-4 T 21-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain VFU_RS11405 9016c887294145802c6d8f8abd989507 101 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 8 97 8.7E-37 T 21-04-2016 IPR011846 Cyd operon protein YbgE VFU_RS11405 9016c887294145802c6d8f8abd989507 101 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 20 97 9.1E-31 T 21-04-2016 IPR011846 Cyd operon protein YbgE VFU_RS06910 4caea12fe8e1e78197d5aec8d2a5d3c1 354 Pfam PF02120 Flagellar hook-length control protein FliK 236 317 1.8E-19 T 21-04-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal VFU_RS12200 18d0750f21e9034b52dd8f0f5d85a904 139 Pfam PF05926 Phage head completion protein (GPL) 74 136 4.1E-12 T 21-04-2016 IPR009225 Bacteriophage head completion protein GpL GO:0019069 VFU_RS12200 18d0750f21e9034b52dd8f0f5d85a904 139 Pfam PF05926 Phage head completion protein (GPL) 20 62 4.6E-5 T 21-04-2016 IPR009225 Bacteriophage head completion protein GpL GO:0019069 VFU_RS22785 b4e2ee68794c8b50b4a8f8c5e63881b0 300 Pfam PF02120 Flagellar hook-length control protein FliK 181 260 4.4E-16 T 21-04-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal VFU_RS09560 d6cdde47e99da2517da362d67829af4d 707 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 238 497 1.3E-15 T 21-04-2016 IPR018712 Domain of unknown function DUF2235 VFU_RS17875 57408ab9ff7048a6e3ef449bbc4d320b 127 Pfam PF05170 AsmA family 7 118 6.8E-25 T 21-04-2016 IPR007844 AsmA VFU_RS11180 1af9845c44de7ef1676ebcc3cedeceac 423 Pfam PF06097 Bacterial protein of unknown function (DUF945) 7 410 5.6E-40 T 21-04-2016 IPR010352 Protein of unknown function DUF945 VFU_RS07010 e6fa6df6e88182e16f11f5cea452ecc9 146 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 8 142 5.9E-20 T 21-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 VFU_RS05035 46c39a7e33c84a19aa959d33e61b950d 191 Pfam PF03923 Uncharacterized lipoprotein 28 186 1.4E-50 T 21-04-2016 IPR005619 Uncharacterised protein family, YajG VFU_RS03240 f0cddf091936c39ebda2e99566d355a8 71 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 7 65 1.0E-31 T 21-04-2016 IPR012658 Conserved hypothetical protein CHP02443 VFU_RS03240 f0cddf091936c39ebda2e99566d355a8 71 Pfam PF09526 Probable metal-binding protein (DUF2387) 9 54 1.0E-19 T 21-04-2016 IPR012658 Conserved hypothetical protein CHP02443 VFU_RS08845 8497924867a8fa8575043e18945f8d5e 165 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 21 156 1.6E-15 T 21-04-2016 IPR009936 Protein of unknown function DUF1468 VFU_RS09920 3b4143cc8df4825ac1a9e53f123f3f9c 183 Pfam PF08774 VRR-NUC domain 99 157 1.0E-8 T 21-04-2016 IPR014883 VRR-NUC domain GO:0016788 VFU_RS09920 3b4143cc8df4825ac1a9e53f123f3f9c 183 SMART SM00990 73 158 2.4E-4 T 21-04-2016 IPR014883 VRR-NUC domain GO:0016788 VFU_RS00600 6317cf49a53bca1971d6208accd3baeb 96 Gene3D G3DSA:1.10.1200.10 10 95 4.8E-5 T 21-04-2016 IPR009081 Phosphopantetheine binding ACP domain VFU_RS06575 cc10bd0601da0242ab2f713b475badee 192 SUPERFAMILY SSF56925 54 192 3.4E-16 T 21-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VFU_RS06575 cc10bd0601da0242ab2f713b475badee 192 Gene3D G3DSA:2.40.160.20 53 192 2.3E-16 T 21-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VFU_RS22350 51163f9310b55b4677cf402cb3f94882 275 SUPERFAMILY SSF52777 8 106 5.56E-5 T 21-04-2016 VFU_RS22350 51163f9310b55b4677cf402cb3f94882 275 Pfam PF00668 Condensation domain 41 192 3.2E-5 T 21-04-2016 IPR001242 Condensation domain VFU_RS02320 67808092b70cf60f56422ecf8c367fa8 109 Pfam PF10694 Protein of unknown function (DUF2500) 4 105 3.3E-25 T 21-04-2016 IPR019635 Protein of unknown function DUF2500 VFU_RS06880 5057e802cbdb929116c3134b7dde6a92 176 Pfam PF04170 NlpE N-terminal domain 79 166 1.2E-30 T 21-04-2016 IPR007298 Copper resistance lipoprotein NlpE VFU_RS01180 418206bccfc3ff0915b41d3874229c66 86 Pfam PF10048 Predicted integral membrane protein (DUF2282) 33 82 4.2E-24 T 21-04-2016 IPR018740 Protein of unknown function DUF2282, integral membrane VFU_RS02530 af60891b4c54214c9a96929476ebe434 212 Pfam PF11172 Protein of unknown function (DUF2959) 13 210 3.3E-88 T 21-04-2016 IPR021342 Protein of unknown function DUF2959 VFU_RS11090 b5ce29926a0a9d40e6037e1405878b16 66 Pfam PF14056 Domain of unknown function (DUF4250) 10 61 4.3E-19 T 21-04-2016 IPR025346 Protein of unknown function DUF4250 VFU_RS12715 0512723f680a373ba4c359c48ee4175b 264 Pfam PF07556 Protein of unknown function (DUF1538) 21 246 2.0E-69 T 21-04-2016 IPR011435 Protein of unknown function DUF1538 VFU_RS03510 f16640d1b6dfcf2bbd6f8614eadc016c 113 Pfam PF10795 Protein of unknown function (DUF2607) 2 96 1.9E-39 T 21-04-2016 IPR019731 Protein of unknown function DUF2607 VFU_RS14805 bce0a03f1f1d93627d5c4fec5daf0498 265 Pfam PF09955 Predicted integral membrane protein (DUF2189) 82 195 7.7E-25 T 21-04-2016 IPR018692 Predicted integral membrane protein DUF2189 VFU_RS09180 f9ce7f7333b489feadd1c88e4525455c 183 Pfam PF11748 Protein of unknown function (DUF3306) 5 108 9.8E-18 T 21-04-2016 IPR021735 Protein of unknown function DUF3306 VFU_RS12400 39f18a24baef1f7ec9150564deac4618 241 Pfam PF11859 Protein of unknown function (DUF3379) 1 237 4.2E-83 T 21-04-2016 IPR021806 Protein of unknown function DUF3379 VFU_RS13910 ccfc02fe1bf6eff3e129fee920798854 162 Pfam PF01478 Type IV leader peptidase family 3 101 1.3E-8 T 21-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 VFU_RS17855 f90e410d43b0b3d933cfd0bd42bd4412 80 Pfam PF13521 AAA domain 2 79 1.4E-9 T 21-04-2016 VFU_RS08490 2706b2a6eda780302bd7b2ecbd6e72c5 290 Pfam PF13084 Domain of unknown function (DUF3943) 127 236 3.5E-38 T 21-04-2016 IPR025079 Domain of unknown function DUF3943 VFU_RS08105 05f7baac38f7c3f050ccf1a835d1c930 399 Pfam PF11449 Putative, 10TM heavy-metal exporter 40 397 2.4E-156 T 21-04-2016 IPR021552 Putative, 10TM heavy-metal exporter VFU_RS13165 5a2386b4dddf783792965dfaa2e2326e 63 Pfam PF14056 Domain of unknown function (DUF4250) 8 62 3.7E-20 T 21-04-2016 IPR025346 Protein of unknown function DUF4250 VFU_RS09845 bec1ee893ee54823a0a742f0d8df42e5 171 Pfam PF07291 Methylamine utilisation protein MauE 2 136 3.6E-11 T 21-04-2016 IPR009908 Methylamine utilisation protein, MauE GO:0016021|GO:0030416 UniPathway: UPA00895 VFU_RS01090 d78759320b8d7304f0cc04c61264c8a7 199 Pfam PF11726 Protein of unknown function (DUF3296) 36 197 1.3E-37 T 21-04-2016 IPR021723 Inovirus Gp2 VFU_RS00640 54cfee06b96c3b9b9296784a02c5e617 60 Gene3D G3DSA:3.40.50.720 6 44 5.6E-7 T 21-04-2016 IPR016040 NAD(P)-binding domain VFU_RS12165 9a20fa20e912874229e28f1b54cfd39d 194 Pfam PF11351 Holin of 3TMs, for gene-transfer release 65 168 5.4E-12 T 21-04-2016 IPR021497 Holin of 3TMs, for gene-transfer release VFU_RS00685 dcaeaafffee0c91a87c2b98548784d45 330 Pfam PF14897 EpsG family 31 322 2.3E-13 T 21-04-2016 VFU_RS12760 90abcbae24fabc4245a32de196a4240c 269 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 154 224 8.7E-7 T 21-04-2016 IPR018635 Uncharacterised protein family UPF0319 VFU_RS00880 288c93ef4f05f08c974b5efac076d68e 358 SUPERFAMILY SSF52980 290 357 6.97E-6 T 21-04-2016 IPR011335 Restriction endonuclease type II-like VFU_RS01190 5d2935cbf4d4351119a244066e632712 255 Pfam PF09836 Putative DNA-binding domain 5 95 1.1E-21 T 21-04-2016 IPR018640 Putative DNA-binding domain, bacteria VFU_RS08540 6b4874d1e86d015f5ac42a53f17fe133 419 Pfam PF09375 Imelysin 39 397 1.7E-97 T 21-04-2016 VFU_RS11280 2a2e9fb5da3678b79b848442f08aef1f 155 Pfam PF07670 Nucleoside recognition 31 124 2.3E-6 T 21-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 VFU_RS08115 ecc197e89f262fa415d664cc7ade86b7 129 Pfam PF11042 Protein of unknown function (DUF2750) 23 122 2.4E-36 T 21-04-2016 IPR021284 Protein of unknown function DUF2750 VFU_RS12180 de3bbf2fe22ee4def546c1ff6f50aa05 151 Pfam PF10772 Protein of unknown function (DUF2597) 8 141 4.7E-63 T 21-04-2016 IPR019708 Bacteriophage HP1, Orf24 VFU_RS06105 43d512e420f71224743c1d3ce7b411c0 257 Pfam PF08907 Domain of unknown function (DUF1853) 41 217 8.0E-40 T 21-04-2016 IPR015003 Protein of unknown function DUF1853 VFU_RS13110 719c6803b8c1d81c79ea9f80c15c3847 100 Pfam PF11743 Protein of unknown function (DUF3301) 6 96 1.9E-27 T 21-04-2016 IPR021732 Protein of unknown function DUF3301 VFU_RS10715 4fc7e572af007cc1244f35878b929aa3 275 Pfam PF10977 Protein of unknown function (DUF2797) 38 270 3.8E-95 T 21-04-2016 IPR021246 Protein of unknown function DUF2797 VFU_RS08550 869c7fcc9fa052f95542396c8e4804f9 341 Pfam PF09375 Imelysin 44 320 3.7E-38 T 21-04-2016 VFU_RS13800 90e96e3b5db10a30305c8c94d1439706 394 Pfam PF05940 NnrS protein 16 388 5.2E-109 T 21-04-2016 IPR010266 NnrS