BSQ33_RS00020 SM00481 DNA polymerase alpha chain like domain BSQ33_RS00030 SM00363 S4 RNA-binding domain BSQ33_RS00035 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS00040 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS00075 SM00919 Malic enzyme, NAD binding domain BSQ33_RS00075 SM01274 BSQ33_RS00075 BSQ33_RS00100 SM00671 Sel1-like repeats. BSQ33_RS00140 SM00841 Elongation factor P, C-terminal BSQ33_RS00140 SM01185 BSQ33_RS00140 BSQ33_RS00150 SM00486 DNA polymerase type-B family BSQ33_RS00160 SM00421 helix_turn_helix, Lux Regulon BSQ33_RS00160 SM00448 cheY-homologous receiver domain BSQ33_RS00165 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BSQ33_RS00165 SM00465 GIY-YIG type nucleases (URI domain) BSQ33_RS00185 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS00190 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS00210 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS00235 SM00155 Phospholipase D. Active site motifs. BSQ33_RS00240 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_RS00240 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_RS00280 SM00487 DEAD-like helicases superfamily BSQ33_RS00280 SM00490 helicase superfamily c-terminal domain BSQ33_RS00285 SM00363 S4 RNA-binding domain BSQ33_RS00325 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSQ33_RS00325 SM00895 BSQ33_RS00325 BSQ33_RS00330 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BSQ33_RS00345 SM00849 Metallo-beta-lactamase superfamily BSQ33_RS00365 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSQ33_RS00390 SM00479 BSQ33_RS00390 BSQ33_RS00405 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BSQ33_RS00470 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS00505 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_RS00505 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_RS00505 SM01049 BSQ33_RS00505 BSQ33_RS00515 SM00852 Probable molybdopterin binding domain BSQ33_RS00545 SM00434 DNA Topoisomerase IV BSQ33_RS00560 SM00849 Metallo-beta-lactamase superfamily BSQ33_RS00575 SM00347 helix_turn_helix multiple antibiotic resistance protein BSQ33_RS00585 SM00479 BSQ33_RS00585 BSQ33_RS00590 SM00100 Cyclic nucleotide-monophosphate binding domain BSQ33_RS00590 SM00116 Domain in cystathionine beta-synthase and other proteins. BSQ33_RS00620 SM00448 cheY-homologous receiver domain BSQ33_RS00625 SM00091 PAS domain BSQ33_RS00625 SM00387 Histidine kinase-like ATPases BSQ33_RS00635 SM00764 Citrate lyase ligase C-terminal domain BSQ33_RS00665 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BSQ33_RS00685 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS00700 SM00062 Bacterial periplasmic substrate-binding proteins BSQ33_RS00745 SM00945 ProQ/FINO family BSQ33_RS00750 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BSQ33_RS00750 SM00245 tail specific protease BSQ33_RS00790 SM00981 BSQ33_RS00790 BSQ33_RS00795 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS00830 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BSQ33_RS00830 SM00091 PAS domain BSQ33_RS00830 SM00267 diguanylate cyclase BSQ33_RS00995 SM00825 Beta-ketoacyl synthase BSQ33_RS01025 SM00387 Histidine kinase-like ATPases BSQ33_RS01025 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_RS01025 SM00448 cheY-homologous receiver domain BSQ33_RS01030 SM00897 FIST N domain BSQ33_RS01030 SM01204 BSQ33_RS01030 BSQ33_RS01040 SM00100 Cyclic nucleotide-monophosphate binding domain BSQ33_RS01040 SM00419 helix_turn_helix, cAMP Regulatory protein BSQ33_RS01065 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS01105 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS01125 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_RS01125 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_RS01155 SM00028 Tetratricopeptide repeats BSQ33_RS01220 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_RS01235 SM01130 BSQ33_RS01235 BSQ33_RS01240 SM00354 helix_turn _helix lactose operon repressor BSQ33_RS01255 SM01130 BSQ33_RS01255 BSQ33_RS01270 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BSQ33_RS01275 SM00226 Low molecular weight phosphatase family BSQ33_RS01310 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_RS01310 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_RS01345 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS01350 SM00354 helix_turn _helix lactose operon repressor BSQ33_RS01375 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS01375 SM00487 DEAD-like helicases superfamily BSQ33_RS01375 SM00490 helicase superfamily c-terminal domain BSQ33_RS01375 SM00847 Helicase associated domain (HA2) Add an annotation BSQ33_RS01400 SM00729 Elongator protein 3, MiaB family, Radical SAM BSQ33_RS01410 SM00479 BSQ33_RS01410 BSQ33_RS01475 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSQ33_RS01475 SM00895 BSQ33_RS01475 BSQ33_RS01485 SM00091 PAS domain BSQ33_RS01485 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS01600 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS01625 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_RS01625 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_RS01835 SM00893 Electron transfer flavoprotein domain BSQ33_RS01850 SM00989 BSQ33_RS01850 BSQ33_RS01865 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_RS01920 SM00052 Putative diguanylate phosphodiesterase BSQ33_RS01920 SM00267 diguanylate cyclase BSQ33_RS01930 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_RS01930 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_RS01935 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_RS01935 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_RS01985 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_RS02035 SM00495 Chitin-binding domain type 3 BSQ33_RS02040 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_RS02065 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS02080 SM00421 helix_turn_helix, Lux Regulon BSQ33_RS02110 SM00267 diguanylate cyclase BSQ33_RS02120 SM00260 Two component signalling adaptor domain BSQ33_RS02120 SM00448 cheY-homologous receiver domain BSQ33_RS02135 SM00028 Tetratricopeptide repeats BSQ33_RS02160 SM00112 Cadherin repeats. BSQ33_RS02180 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS02340 SM00479 BSQ33_RS02340 BSQ33_RS02370 SM00411 bacterial (prokaryotic) histone like domain BSQ33_RS02375 SM00873 B3/4 domain BSQ33_RS02375 SM00874 tRNA synthetase B5 domain BSQ33_RS02375 SM00896 Ferredoxin-fold anticodon binding domain BSQ33_RS02405 SM00849 Metallo-beta-lactamase superfamily BSQ33_RS02520 SM00354 helix_turn _helix lactose operon repressor BSQ33_RS02540 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BSQ33_RS02540 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BSQ33_RS02540 SM00493 BSQ33_RS02540 BSQ33_RS02570 SM00316 Ribosomal protein S1-like RNA-binding domain BSQ33_RS02575 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS02575 SM01086 C-terminal, D2-small domain, of ClpB protein BSQ33_RS02585 SM00357 Cold shock protein domain BSQ33_RS02645 SM00528 Domain in histone-like proteins of HNS family BSQ33_RS02735 SM00729 Elongator protein 3, MiaB family, Radical SAM BSQ33_RS02735 SM00876 Biotin and Thiamin Synthesis associated domain BSQ33_RS02775 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS02785 SM00245 tail specific protease BSQ33_RS02795 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_RS02795 SM00387 Histidine kinase-like ATPases BSQ33_RS02795 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_RS02800 SM00448 cheY-homologous receiver domain BSQ33_RS02800 SM00862 Transcriptional regulatory protein, C terminal BSQ33_RS02810 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS02830 SM00267 diguanylate cyclase BSQ33_RS02835 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS02875 SM00640 Glycosyl hydrolases family 32 BSQ33_RS02880 SM00354 helix_turn _helix lactose operon repressor BSQ33_RS02890 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_RS02895 SM00448 cheY-homologous receiver domain BSQ33_RS02895 SM00862 Transcriptional regulatory protein, C terminal BSQ33_RS02900 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS02915 SM00448 cheY-homologous receiver domain BSQ33_RS02920 SM00387 Histidine kinase-like ATPases BSQ33_RS02920 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_RS02925 SM00387 Histidine kinase-like ATPases BSQ33_RS02925 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_RS02935 SM00448 cheY-homologous receiver domain BSQ33_RS02980 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BSQ33_RS02990 SM01005 Alanine racemase, C-terminal domain BSQ33_RS03000 SM00797 Allophanate hydrolase subunit 2 BSQ33_RS03005 SM00796 Allophanate hydrolase subunit 1 BSQ33_RS03010 SM00052 Putative diguanylate phosphodiesterase BSQ33_RS03020 SM00637 BSQ33_RS03020 BSQ33_RS03025 SM00458 Ricin-type beta-trefoil BSQ33_RS03045 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_RS03080 SM00421 helix_turn_helix, Lux Regulon BSQ33_RS03110 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_RS03110 SM00871 Bacterial transcription activator, effector binding domain BSQ33_RS03125 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BSQ33_RS03125 SM00637 BSQ33_RS03125 BSQ33_RS03160 SM00046 Diacylglycerol kinase catalytic domain (presumed) BSQ33_RS03160 SM00195 Dual specificity phosphatase, catalytic domain BSQ33_RS03160 SM00404 Protein tyrosine phosphatase, catalytic domain motif BSQ33_RS03180 SM00749 bacterial OsmY and nodulation domain BSQ33_RS03185 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS03235 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BSQ33_RS03250 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_RS03275 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_RS03310 SM00344 helix_turn_helix ASNC type BSQ33_RS03330 SM00978 BSQ33_RS03330 BSQ33_RS03340 SM00563 Phosphate acyltransferases BSQ33_RS03355 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BSQ33_RS03385 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS03410 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_RS03410 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_RS03420 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BSQ33_RS03445 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSQ33_RS03445 SM00866 BSQ33_RS03445 BSQ33_RS03495 SM01321 BSQ33_RS03495 BSQ33_RS03500 SM01144 BSQ33_RS03500 BSQ33_RS03560 SM00062 Bacterial periplasmic substrate-binding proteins BSQ33_RS03575 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS03610 SM00870 BSQ33_RS03610 BSQ33_RS03615 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_RS03635 SM01130 BSQ33_RS03635 BSQ33_RS03640 SM00420 helix_turn_helix, Deoxyribose operon repressor BSQ33_RS03645 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BSQ33_RS03645 SM00091 PAS domain BSQ33_RS03645 SM00267 diguanylate cyclase BSQ33_RS03685 SM00052 Putative diguanylate phosphodiesterase BSQ33_RS03685 SM00267 diguanylate cyclase BSQ33_RS03705 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS03710 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS03715 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_RS03725 SM00829 Enoylreductase BSQ33_RS03740 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BSQ33_RS03740 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BSQ33_RS03740 SM00493 BSQ33_RS03740 BSQ33_RS03775 SM00260 Two component signalling adaptor domain BSQ33_RS03780 SM00260 Two component signalling adaptor domain BSQ33_RS03790 SM00448 cheY-homologous receiver domain BSQ33_RS03795 SM00073 Histidine Phosphotransfer domain BSQ33_RS03795 SM00260 Two component signalling adaptor domain BSQ33_RS03795 SM00387 Histidine kinase-like ATPases BSQ33_RS03795 SM01231 BSQ33_RS03795 BSQ33_RS03805 SM00448 cheY-homologous receiver domain BSQ33_RS03820 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS03820 SM00962 SRP54-type protein, GTPase domain BSQ33_RS03830 SM00855 Phosphoglycerate mutase family BSQ33_RS03845 SM00836 DALR anticodon binding domain BSQ33_RS03845 SM01016 Arginyl tRNA synthetase N terminal dom BSQ33_RS03870 SM00899 BSQ33_RS03870 BSQ33_RS03880 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS03890 SM00881 CoA binding domain BSQ33_RS03905 SM00861 Transketolase, pyrimidine binding domain BSQ33_RS03980 SM00859 Semialdehyde dehydrogenase, NAD binding domain BSQ33_RS03990 SM00825 Beta-ketoacyl synthase BSQ33_RS04025 SM00463 Small MutS-related domain BSQ33_RS04080 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS04105 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS04105 SM00448 cheY-homologous receiver domain BSQ33_RS04110 SM00091 PAS domain BSQ33_RS04110 SM00387 Histidine kinase-like ATPases BSQ33_RS04110 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_RS04115 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS04160 SM00900 BSQ33_RS04160 BSQ33_RS04175 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS04235 SM01130 BSQ33_RS04235 BSQ33_RS04245 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_RS04245 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_RS04310 SM00937 BSQ33_RS04310 BSQ33_RS04330 SM01400 BSQ33_RS04330 BSQ33_RS04445 SM00047 Lysozyme subfamily 2 BSQ33_RS04490 SM00138 Methyltransferase, chemotaxis proteins BSQ33_RS04495 SM00260 Two component signalling adaptor domain BSQ33_RS04495 SM00448 cheY-homologous receiver domain BSQ33_RS04500 SM00858 BSQ33_RS04500 BSQ33_RS04555 SM00347 helix_turn_helix multiple antibiotic resistance protein BSQ33_RS04590 SM00463 Small MutS-related domain BSQ33_RS04635 SM00479 BSQ33_RS04635 BSQ33_RS04650 SM00849 Metallo-beta-lactamase superfamily BSQ33_RS04655 SM00257 Lysin motif BSQ33_RS04665 SM00938 Nitrogen regulatory protein P-II BSQ33_RS04670 SM00977 TilS substrate C-terminal domain BSQ33_RS04680 SM00481 DNA polymerase alpha chain like domain BSQ33_RS04710 SM00935 Outer membrane protein (OmpH-like) BSQ33_RS04720 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BSQ33_RS04770 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BSQ33_RS04825 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BSQ33_RS04880 SM00729 Elongator protein 3, MiaB family, Radical SAM BSQ33_RS04905 SM00900 BSQ33_RS04905 BSQ33_RS04970 SM00925 MltA specific insert domain BSQ33_RS05030 SM00354 helix_turn _helix lactose operon repressor BSQ33_RS05055 SM00838 Elongation factor G C-terminus BSQ33_RS05055 SM00889 Elongation factor G, domain IV BSQ33_RS05060 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS05085 SM01133 BSQ33_RS05085 BSQ33_RS05120 SM00986 Uracil DNA glycosylase superfamily BSQ33_RS05120 SM00987 UreE urease accessory protein, C-terminal domain BSQ33_RS05125 SM00518 AP endonuclease family 2 BSQ33_RS05160 SM00448 cheY-homologous receiver domain BSQ33_RS05160 SM00862 Transcriptional regulatory protein, C terminal BSQ33_RS05165 SM00073 Histidine Phosphotransfer domain BSQ33_RS05165 SM00091 PAS domain BSQ33_RS05165 SM00387 Histidine kinase-like ATPases BSQ33_RS05165 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_RS05165 SM00448 cheY-homologous receiver domain BSQ33_RS05170 SM00267 diguanylate cyclase BSQ33_RS05175 SM00729 Elongator protein 3, MiaB family, Radical SAM BSQ33_RS05230 SM00851 MGS-like domain BSQ33_RS05230 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BSQ33_RS05235 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BSQ33_RS05250 SM00957 SecA DEAD-like domain BSQ33_RS05250 SM00958 SecA preprotein cross-linking domain BSQ33_RS05265 SM00864 Tubulin/FtsZ family, GTPase domain BSQ33_RS05265 SM00865 Tubulin/FtsZ family, C-terminal domain BSQ33_RS05270 SM00842 Cell division protein FtsA BSQ33_RS05345 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_RS05345 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_RS05370 SM00749 bacterial OsmY and nodulation domain BSQ33_RS05410 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BSQ33_RS05415 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BSQ33_RS05440 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS05440 SM00962 SRP54-type protein, GTPase domain BSQ33_RS05440 SM00963 SRP54-type protein, helical bundle domain BSQ33_RS05450 SM01091 Transporter associated domain BSQ33_RS05475 SM00829 Enoylreductase BSQ33_RS05535 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BSQ33_RS05545 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS05555 SM00346 helix_turn_helix isocitrate lyase regulation BSQ33_RS05600 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS05645 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BSQ33_RS05645 SM00534 ATPase domain of DNA mismatch repair MUTS family BSQ33_RS05650 SM00448 cheY-homologous receiver domain BSQ33_RS05650 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BSQ33_RS05655 SM00387 Histidine kinase-like ATPases BSQ33_RS05675 SM00257 Lysin motif BSQ33_RS05720 SM00905 Dihydroneopterin aldolase BSQ33_RS05725 SM01207 BSQ33_RS05725 BSQ33_RS05750 SM00400 zinc finger BSQ33_RS05750 SM00493 BSQ33_RS05750 BSQ33_RS05750 SM00766 DNA primase DnaG DnaB-binding BSQ33_RS05820 SM00829 Enoylreductase BSQ33_RS05825 SM00563 Phosphate acyltransferases BSQ33_RS05880 SM00825 Beta-ketoacyl synthase BSQ33_RS06000 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_RS06010 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_RS06010 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_RS06085 SM00091 PAS domain BSQ33_RS06085 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_RS06095 SM00357 Cold shock protein domain BSQ33_RS06105 SM00420 helix_turn_helix, Deoxyribose operon repressor BSQ33_RS06105 SM01134 BSQ33_RS06105 BSQ33_RS06140 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BSQ33_RS06145 SM00861 Transketolase, pyrimidine binding domain BSQ33_RS06155 SM00731 SprT homologues. BSQ33_RS06175 SM00732 Likely ribonuclease with RNase H fold. BSQ33_RS06180 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS06200 SM01152 BSQ33_RS06200 BSQ33_RS06210 SM00448 cheY-homologous receiver domain BSQ33_RS06210 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BSQ33_RS06215 SM00073 Histidine Phosphotransfer domain BSQ33_RS06215 SM00091 PAS domain BSQ33_RS06215 SM00387 Histidine kinase-like ATPases BSQ33_RS06215 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_RS06215 SM00448 cheY-homologous receiver domain BSQ33_RS06220 SM00331 Sigma factor PP2C-like phosphatases BSQ33_RS06225 SM00387 Histidine kinase-like ATPases BSQ33_RS06260 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_RS06315 SM00729 Elongator protein 3, MiaB family, Radical SAM BSQ33_RS06330 SM00478 endonuclease III BSQ33_RS06400 SM00271 DnaJ molecular chaperone homology domain BSQ33_RS06420 SM00650 Ribosomal RNA adenine dimethylases BSQ33_RS06505 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSQ33_RS06505 SM00895 BSQ33_RS06505 BSQ33_RS06555 SM01209 BSQ33_RS06555 BSQ33_RS06600 SM00316 Ribosomal protein S1-like RNA-binding domain BSQ33_RS06625 SM00052 Putative diguanylate phosphodiesterase BSQ33_RS06625 SM00267 diguanylate cyclase BSQ33_RS06670 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS06675 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BSQ33_RS06765 SM00421 helix_turn_helix, Lux Regulon BSQ33_RS06775 SM01018 B12 binding domain BSQ33_RS06885 SM00487 DEAD-like helicases superfamily BSQ33_RS06915 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS06920 SM00823 Phosphopantetheine attachment site BSQ33_RS06925 SM00823 Phosphopantetheine attachment site BSQ33_RS06930 SM00823 Phosphopantetheine attachment site BSQ33_RS06955 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS07000 SM00838 Elongation factor G C-terminus BSQ33_RS07000 SM00889 Elongation factor G, domain IV BSQ33_RS07040 SM00320 WD40 repeats BSQ33_RS07055 SM00244 prohibitin homologues BSQ33_RS07060 SM00244 prohibitin homologues BSQ33_RS07080 SM00853 MutL C terminal dimerisation domain BSQ33_RS07080 SM01340 BSQ33_RS07080 BSQ33_RS07085 SM00257 Lysin motif BSQ33_RS07085 SM00646 BSQ33_RS07085 BSQ33_RS07125 SM00479 BSQ33_RS07125 BSQ33_RS07140 SM00020 Trypsin-like serine protease BSQ33_RS07190 SM00663 RNA polymerase I subunit A N-terminus BSQ33_RS07220 SM00649 Ribosomal protein L11/L12 BSQ33_RS07225 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BSQ33_RS07225 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BSQ33_RS07280 SM00155 Phospholipase D. Active site motifs. BSQ33_RS07305 SM00357 Cold shock protein domain BSQ33_RS07305 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS07305 SM00959 Rho termination factor, N-terminal domain BSQ33_RS07315 SM00487 DEAD-like helicases superfamily BSQ33_RS07315 SM00490 helicase superfamily c-terminal domain BSQ33_RS07325 SM00387 Histidine kinase-like ATPases BSQ33_RS07325 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_RS07325 SM00448 cheY-homologous receiver domain BSQ33_RS07335 SM00100 Cyclic nucleotide-monophosphate binding domain BSQ33_RS07335 SM00116 Domain in cystathionine beta-synthase and other proteins. BSQ33_RS07340 SM00479 BSQ33_RS07340 BSQ33_RS07365 SM00878 Biotin carboxylase C-terminal domain BSQ33_RS07420 SM00822 BSQ33_RS07420 BSQ33_RS07475 SM00798 AICARFT/IMPCHase bienzyme BSQ33_RS07475 SM00851 MGS-like domain BSQ33_RS07480 SM01209 BSQ33_RS07480 BSQ33_RS07480 SM01210 BSQ33_RS07480 BSQ33_RS07485 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_RS07485 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_RS07485 SM01049 BSQ33_RS07485 BSQ33_RS07495 SM00316 Ribosomal protein S1-like RNA-binding domain BSQ33_RS07495 SM00732 Likely ribonuclease with RNase H fold. BSQ33_RS07575 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS07590 SM00363 S4 RNA-binding domain BSQ33_RS07630 SM01230 BSQ33_RS07630 BSQ33_RS07635 SM00091 PAS domain BSQ33_RS07635 SM00387 Histidine kinase-like ATPases BSQ33_RS07635 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_RS07640 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS07640 SM00448 cheY-homologous receiver domain BSQ33_RS07700 SM00360 RNA recognition motif BSQ33_RS07735 SM00833 Cobalamin synthesis protein cobW C-terminal domain BSQ33_RS07745 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS07755 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS07760 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS08020 SM00563 Phosphate acyltransferases BSQ33_RS08045 SM00450 Rhodanese Homology Domain BSQ33_RS08060 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS08065 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS08065 SM00962 SRP54-type protein, GTPase domain BSQ33_RS08065 SM00963 SRP54-type protein, helical bundle domain BSQ33_RS08105 SM00052 Putative diguanylate phosphodiesterase BSQ33_RS08130 SM00923 MbtH-like protein BSQ33_RS08155 SM01144 BSQ33_RS08155 BSQ33_RS08190 SM01219 BSQ33_RS08190 BSQ33_RS08220 SM00729 Elongator protein 3, MiaB family, Radical SAM BSQ33_RS08250 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BSQ33_RS08250 SM00474 3'-5' exonuclease BSQ33_RS08250 SM00475 5'-3' exonuclease BSQ33_RS08250 SM00482 DNA polymerase A domain BSQ33_RS08255 SM01004 Delta-aminolevulinic acid dehydratase BSQ33_RS08310 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_RS08325 SM01007 Class II Aldolase and Adducin N-terminal domain BSQ33_RS08340 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS08390 SM00823 Phosphopantetheine attachment site BSQ33_RS08410 SM00530 Helix-turn-helix XRE-family like proteins BSQ33_RS08495 SM00866 BSQ33_RS08495 BSQ33_RS08540 SM00344 helix_turn_helix ASNC type BSQ33_RS08580 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS08585 SM00876 Biotin and Thiamin Synthesis associated domain BSQ33_RS08700 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS08740 SM00470 ParB-like nuclease domain BSQ33_RS08755 SM01228 BSQ33_RS08755 BSQ33_RS08795 SM01234 BSQ33_RS08795 BSQ33_RS08810 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS08820 SM00062 Bacterial periplasmic substrate-binding proteins BSQ33_RS08825 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS08825 SM00760 Bacterial dnaA protein helix-turn-helix domain BSQ33_RS08830 SM00480 DNA polymerase III beta subunit BSQ33_RS08840 SM00387 Histidine kinase-like ATPases BSQ33_RS08840 SM00433 TopoisomeraseII BSQ33_RS08925 SM00796 Allophanate hydrolase subunit 1 BSQ33_RS08925 SM00797 Allophanate hydrolase subunit 2 BSQ33_RS08925 SM00878 Biotin carboxylase C-terminal domain BSQ33_RS08940 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS08955 SM00836 DALR anticodon binding domain BSQ33_RS08985 SM00028 Tetratricopeptide repeats BSQ33_RS09025 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS09030 SM00563 Phosphate acyltransferases BSQ33_RS09045 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_RS09115 SM01001 AIR carboxylase BSQ33_RS09175 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_RS09175 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_RS09240 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS09280 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS09290 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_RS09290 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_RS09310 SM00014 Acid phosphatase homologues BSQ33_RS09320 SM01022 BSQ33_RS09320 BSQ33_RS09345 SM00341 Helicase and RNase D C-terminal BSQ33_RS09345 SM00487 DEAD-like helicases superfamily BSQ33_RS09345 SM00490 helicase superfamily c-terminal domain BSQ33_RS09345 SM00956 BSQ33_RS09345 BSQ33_RS09390 SM00354 helix_turn _helix lactose operon repressor BSQ33_RS09425 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS09450 SM00984 UDP binding domain BSQ33_RS09630 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_RS09630 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_RS09630 SM01049 BSQ33_RS09630 BSQ33_RS09655 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BSQ33_RS09655 SM01232 BSQ33_RS09655 BSQ33_RS09890 SM00986 Uracil DNA glycosylase superfamily BSQ33_RS09890 SM00987 UreE urease accessory protein, C-terminal domain BSQ33_RS09895 SM00411 bacterial (prokaryotic) histone like domain BSQ33_RS09905 SM00458 Ricin-type beta-trefoil BSQ33_RS09905 SM00656 BSQ33_RS09905 BSQ33_RS09905 SM00710 Parallel beta-helix repeats BSQ33_RS09910 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSQ33_RS09915 SM00448 cheY-homologous receiver domain BSQ33_RS09915 SM00862 Transcriptional regulatory protein, C terminal BSQ33_RS09920 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_RS09920 SM00387 Histidine kinase-like ATPases BSQ33_RS09920 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_RS09940 SM00347 helix_turn_helix multiple antibiotic resistance protein BSQ33_RS09945 SM00487 DEAD-like helicases superfamily BSQ33_RS09945 SM00490 helicase superfamily c-terminal domain BSQ33_RS09950 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BSQ33_RS09950 SM00954 Region found in RelA / SpoT proteins BSQ33_RS09955 SM01409 BSQ33_RS09955 BSQ33_RS09960 SM00072 Guanylate kinase homologues. BSQ33_RS09985 SM00421 helix_turn_helix, Lux Regulon BSQ33_RS09985 SM00448 cheY-homologous receiver domain BSQ33_RS10005 SM00091 PAS domain BSQ33_RS10005 SM00267 diguanylate cyclase BSQ33_RS10020 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_RS10020 SM00387 Histidine kinase-like ATPases BSQ33_RS10020 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_RS10025 SM00448 cheY-homologous receiver domain BSQ33_RS10025 SM00862 Transcriptional regulatory protein, C terminal BSQ33_RS10085 SM00919 Malic enzyme, NAD binding domain BSQ33_RS10085 SM01274 BSQ33_RS10085 BSQ33_RS10095 SM00487 DEAD-like helicases superfamily BSQ33_RS10095 SM00490 helicase superfamily c-terminal domain BSQ33_RS10100 SM00354 helix_turn _helix lactose operon repressor BSQ33_RS10115 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS10115 SM01086 C-terminal, D2-small domain, of ClpB protein BSQ33_RS10155 SM00883 Chaperonin 10 Kd subunit BSQ33_RS10165 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS10175 SM00841 Elongation factor P, C-terminal BSQ33_RS10175 SM01185 BSQ33_RS10175 BSQ33_RS10205 SM00450 Rhodanese Homology Domain BSQ33_RS10220 SM00971 Serine acetyltransferase, N-terminal BSQ33_RS10240 SM00859 Semialdehyde dehydrogenase, NAD binding domain BSQ33_RS10355 SM00637 BSQ33_RS10355 BSQ33_RS10385 SM00825 Beta-ketoacyl synthase BSQ33_RS10395 SM00825 Beta-ketoacyl synthase BSQ33_RS10410 SM00822 BSQ33_RS10410 BSQ33_RS10455 SM01150 BSQ33_RS10455 BSQ33_RS10460 SM00100 Cyclic nucleotide-monophosphate binding domain BSQ33_RS10460 SM00419 helix_turn_helix, cAMP Regulatory protein BSQ33_RS10485 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS10515 SM00788 Adenylosuccinate synthetase BSQ33_RS10520 SM00671 Sel1-like repeats. BSQ33_RS10525 SM00316 Ribosomal protein S1-like RNA-binding domain BSQ33_RS10525 SM00357 Cold shock protein domain BSQ33_RS10525 SM00955 BSQ33_RS10525 BSQ33_RS10530 SM00967 RNA 2'-O ribose methyltransferase substrate binding BSQ33_RS10535 SM01403 BSQ33_RS10535 BSQ33_RS10555 SM01382 BSQ33_RS10555 BSQ33_RS10555 SM01383 BSQ33_RS10555 BSQ33_RS10570 SM00322 K homology RNA-binding domain BSQ33_RS10590 SM01374 BSQ33_RS10590 BSQ33_RS10595 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BSQ33_RS10660 SM00363 S4 RNA-binding domain BSQ33_RS10660 SM01390 BSQ33_RS10660 BSQ33_RS10665 SM00662 RNA polymerases D BSQ33_RS10740 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS10810 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS10845 SM00924 MgtE intracellular N domain BSQ33_RS10875 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS10895 SM00116 Domain in cystathionine beta-synthase and other proteins. BSQ33_RS10905 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS10940 SM00563 Phosphate acyltransferases BSQ33_RS10965 SM01061 CAT RNA binding domain BSQ33_RS10990 SM00487 DEAD-like helicases superfamily BSQ33_RS10990 SM00490 helicase superfamily c-terminal domain BSQ33_RS11075 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BSQ33_RS11130 SM01329 BSQ33_RS11130 BSQ33_RS11135 SM00917 LeuA allosteric (dimerisation) domain BSQ33_RS11140 SM00014 Acid phosphatase homologues BSQ33_RS11165 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSQ33_RS11285 SM00838 Elongation factor G C-terminus BSQ33_RS11295 SM00358 Double-stranded RNA binding motif BSQ33_RS11295 SM00535 Ribonuclease III family BSQ33_RS11320 SM00073 Histidine Phosphotransfer domain BSQ33_RS11320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_RS11320 SM00387 Histidine kinase-like ATPases BSQ33_RS11320 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_RS11320 SM00448 cheY-homologous receiver domain BSQ33_RS11330 SM00954 Region found in RelA / SpoT proteins BSQ33_RS11345 SM01192 BSQ33_RS11345 BSQ33_RS11345 SM01193 BSQ33_RS11345 BSQ33_RS11355 SM00287 Bacterial SH3 domain homologues BSQ33_RS11370 SM00880 BSQ33_RS11370 BSQ33_RS11370 SM01118 BSQ33_RS11370 BSQ33_RS11375 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_RS11375 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_RS11415 SM00387 Histidine kinase-like ATPases BSQ33_RS11415 SM00433 TopoisomeraseII BSQ33_RS11420 SM00434 DNA Topoisomerase IV BSQ33_RS11480 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS11500 SM00644 BSQ33_RS11500 BSQ33_RS11525 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSQ33_RS11525 SM00895 BSQ33_RS11525 BSQ33_RS11555 SM00947 Carbonic anhydrase BSQ33_RS11560 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS11590 SM01007 Class II Aldolase and Adducin N-terminal domain BSQ33_RS11600 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BSQ33_RS11605 SM00346 helix_turn_helix isocitrate lyase regulation BSQ33_RS11615 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS11640 SM00346 helix_turn_helix isocitrate lyase regulation BSQ33_RS11680 SM00487 DEAD-like helicases superfamily BSQ33_RS11680 SM00490 helicase superfamily c-terminal domain BSQ33_RS11680 SM00847 Helicase associated domain (HA2) Add an annotation BSQ33_RS11700 SM00938 Nitrogen regulatory protein P-II BSQ33_RS11755 SM01103 BSQ33_RS11755 BSQ33_RS11765 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS11800 SM00316 Ribosomal protein S1-like RNA-binding domain BSQ33_RS11820 SM01387 BSQ33_RS11820 BSQ33_RS11825 SM00316 Ribosomal protein S1-like RNA-binding domain BSQ33_RS11825 SM00322 K homology RNA-binding domain BSQ33_RS11830 SM00028 Tetratricopeptide repeats BSQ33_RS11850 SM00052 Putative diguanylate phosphodiesterase BSQ33_RS11850 SM00091 PAS domain BSQ33_RS11850 SM00267 diguanylate cyclase BSQ33_RS11975 SM00226 Low molecular weight phosphatase family BSQ33_RS11985 SM00448 cheY-homologous receiver domain BSQ33_RS11985 SM00862 Transcriptional regulatory protein, C terminal BSQ33_RS12005 SM00487 DEAD-like helicases superfamily BSQ33_RS12005 SM00490 helicase superfamily c-terminal domain BSQ33_RS12035 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS12050 SM00927 DNA mismatch repair enzyme MutH BSQ33_RS12060 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BSQ33_RS12090 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BSQ33_RS12105 SM00904 Riboflavin kinase BSQ33_RS12155 SM00448 cheY-homologous receiver domain BSQ33_RS12155 SM00850 LytTr DNA-binding domain BSQ33_RS12160 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BSQ33_RS12170 SM00830 Chorismate mutase type II BSQ33_RS12180 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS12220 SM00830 Chorismate mutase type II BSQ33_RS12235 SM00363 S4 RNA-binding domain BSQ33_RS12245 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS12245 SM01086 C-terminal, D2-small domain, of ClpB protein BSQ33_RS12380 SM00530 Helix-turn-helix XRE-family like proteins BSQ33_RS12420 SM00448 cheY-homologous receiver domain BSQ33_RS12420 SM00862 Transcriptional regulatory protein, C terminal BSQ33_RS12425 SM00091 PAS domain BSQ33_RS12425 SM00387 Histidine kinase-like ATPases BSQ33_RS12425 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_RS12455 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS12485 SM00116 Domain in cystathionine beta-synthase and other proteins. BSQ33_RS12500 SM01323 BSQ33_RS12500 BSQ33_RS12545 SM00271 DnaJ molecular chaperone homology domain BSQ33_RS12570 SM00562 BSQ33_RS12570 BSQ33_RS12600 SM00564 beta-propeller repeat BSQ33_RS12605 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS12620 SM00116 Domain in cystathionine beta-synthase and other proteins. BSQ33_RS12620 SM01240 BSQ33_RS12620 BSQ33_RS12695 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_RS12725 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSQ33_RS12735 SM00347 helix_turn_helix multiple antibiotic resistance protein BSQ33_RS12740 SM00420 helix_turn_helix, Deoxyribose operon repressor BSQ33_RS12740 SM01134 BSQ33_RS12740 BSQ33_RS12745 SM01133 BSQ33_RS12745 BSQ33_RS12765 SM00530 Helix-turn-helix XRE-family like proteins BSQ33_RS12805 SM00422 helix_turn_helix, mercury resistance BSQ33_RS12830 SM00448 cheY-homologous receiver domain BSQ33_RS12830 SM00862 Transcriptional regulatory protein, C terminal BSQ33_RS12835 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_RS12835 SM00387 Histidine kinase-like ATPases BSQ33_RS12835 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_RS12845 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BSQ33_RS12860 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BSQ33_RS12870 SM01007 Class II Aldolase and Adducin N-terminal domain BSQ33_RS12885 SM00420 helix_turn_helix, Deoxyribose operon repressor BSQ33_RS12885 SM01134 BSQ33_RS12885 BSQ33_RS12905 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_RS12950 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_RS13045 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_RS13050 SM01061 CAT RNA binding domain BSQ33_RS13080 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_RS13125 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_RS13130 SM00900 BSQ33_RS13130 BSQ33_RS13155 SM00387 Histidine kinase-like ATPases BSQ33_RS13155 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_RS13160 SM00448 cheY-homologous receiver domain BSQ33_RS13160 SM00862 Transcriptional regulatory protein, C terminal BSQ33_RS13250 SM00271 DnaJ molecular chaperone homology domain BSQ33_RS13280 SM00829 Enoylreductase BSQ33_RS13295 SM00062 Bacterial periplasmic substrate-binding proteins BSQ33_RS13300 SM01211 BSQ33_RS13300 BSQ33_RS13305 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BSQ33_RS13305 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BSQ33_RS13320 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_RS13320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_RS13385 SM00861 Transketolase, pyrimidine binding domain BSQ33_RS13415 SM00981 BSQ33_RS13415 BSQ33_RS13440 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BSQ33_RS13440 SM00475 5'-3' exonuclease BSQ33_RS13455 SM00028 Tetratricopeptide repeats BSQ33_RS13485 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS13485 SM00930 BSQ33_RS13485 BSQ33_RS13495 SM00354 helix_turn _helix lactose operon repressor BSQ33_RS13505 SM00642 Alpha-amylase domain BSQ33_RS13535 SM00729 Elongator protein 3, MiaB family, Radical SAM BSQ33_RS13550 SM00387 Histidine kinase-like ATPases BSQ33_RS13550 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_RS13550 SM00448 cheY-homologous receiver domain BSQ33_RS13555 SM00936 Penicillin-binding protein 5, C-terminal domain BSQ33_RS13610 SM00116 Domain in cystathionine beta-synthase and other proteins. BSQ33_RS13610 SM01091 Transporter associated domain BSQ33_RS13625 SM00729 Elongator protein 3, MiaB family, Radical SAM BSQ33_RS13660 SM00771 ZipA, C-terminal domain (FtsZ-binding) BSQ33_RS13665 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BSQ33_RS13665 SM00292 breast cancer carboxy-terminal domain BSQ33_RS13665 SM00532 Ligase N family BSQ33_RS13670 SM00422 helix_turn_helix, mercury resistance BSQ33_RS13700 SM00938 Nitrogen regulatory protein P-II BSQ33_RS13705 SM00116 Domain in cystathionine beta-synthase and other proteins. BSQ33_RS13720 SM00862 Transcriptional regulatory protein, C terminal BSQ33_RS13725 SM00387 Histidine kinase-like ATPases BSQ33_RS13740 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BSQ33_RS13800 SM00479 BSQ33_RS13800 BSQ33_RS13815 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSQ33_RS13815 SM00895 BSQ33_RS13815 BSQ33_RS13820 SM00478 endonuclease III BSQ33_RS13820 SM00525 BSQ33_RS13820 BSQ33_RS13830 SM00900 BSQ33_RS13830 BSQ33_RS13885 SM00487 DEAD-like helicases superfamily BSQ33_RS13885 SM00490 helicase superfamily c-terminal domain BSQ33_RS13890 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS13890 SM00448 cheY-homologous receiver domain BSQ33_RS13905 SM00729 Elongator protein 3, MiaB family, Radical SAM BSQ33_RS13910 SM00852 Probable molybdopterin binding domain BSQ33_RS13930 SM00116 Domain in cystathionine beta-synthase and other proteins. BSQ33_RS13970 SM00226 Low molecular weight phosphatase family BSQ33_RS14000 SM00448 cheY-homologous receiver domain BSQ33_RS14010 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS14020 SM00493 BSQ33_RS14020 BSQ33_RS14100 SM00859 Semialdehyde dehydrogenase, NAD binding domain BSQ33_RS14120 SM00316 Ribosomal protein S1-like RNA-binding domain BSQ33_RS14125 SM00363 S4 RNA-binding domain BSQ33_RS14155 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BSQ33_RS14160 SM00822 BSQ33_RS14160 BSQ33_RS14170 SM00825 Beta-ketoacyl synthase BSQ33_RS14235 SM00260 Two component signalling adaptor domain BSQ33_RS14235 SM00448 cheY-homologous receiver domain BSQ33_RS14240 SM00822 BSQ33_RS14240 BSQ33_RS14250 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_RS14265 SM00422 helix_turn_helix, mercury resistance BSQ33_RS14285 SM00656 BSQ33_RS14285 BSQ33_RS14305 SM00420 helix_turn_helix, Deoxyribose operon repressor BSQ33_RS14305 SM01134 BSQ33_RS14305 BSQ33_RS14315 SM00052 Putative diguanylate phosphodiesterase BSQ33_RS14315 SM00267 diguanylate cyclase BSQ33_RS14320 SM00448 cheY-homologous receiver domain BSQ33_RS14325 SM00387 Histidine kinase-like ATPases BSQ33_RS14360 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_RS14360 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_RS14370 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSQ33_RS14415 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_RS14445 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_RS14445 SM00387 Histidine kinase-like ATPases BSQ33_RS14445 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_RS14445 SM00448 cheY-homologous receiver domain BSQ33_RS14450 SM00052 Putative diguanylate phosphodiesterase BSQ33_RS14450 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BSQ33_RS14450 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BSQ33_RS14450 SM00267 diguanylate cyclase BSQ33_RS14450 SM00448 cheY-homologous receiver domain BSQ33_RS14455 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_RS14475 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BSQ33_RS14495 SM00870 BSQ33_RS14495 BSQ33_RS14515 SM00487 DEAD-like helicases superfamily BSQ33_RS14515 SM00491 BSQ33_RS14515 BSQ33_RS14545 SM00474 3'-5' exonuclease BSQ33_RS14610 SM01359 BSQ33_RS14610 BSQ33_RS14610 SM01360 BSQ33_RS14610 BSQ33_RS14655 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_RS14655 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_RS14655 SM01358 BSQ33_RS14655 BSQ33_RS14660 SM00062 Bacterial periplasmic substrate-binding proteins BSQ33_RS14660 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BSQ33_RS14665 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_RS14725 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS14725 SM00448 cheY-homologous receiver domain BSQ33_RS14730 SM00387 Histidine kinase-like ATPases BSQ33_RS14730 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_RS14745 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS14745 SM00994 ClpX C4-type zinc finger BSQ33_RS14745 SM01086 C-terminal, D2-small domain, of ClpB protein BSQ33_RS14750 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS14750 SM00464 Found in ATP-dependent protease La (LON) BSQ33_RS14755 SM00411 bacterial (prokaryotic) histone like domain BSQ33_RS14770 SM00387 Histidine kinase-like ATPases BSQ33_RS14770 SM00448 cheY-homologous receiver domain BSQ33_RS14785 SM00387 Histidine kinase-like ATPases BSQ33_RS14795 SM00316 Ribosomal protein S1-like RNA-binding domain BSQ33_RS14800 SM00411 bacterial (prokaryotic) histone like domain BSQ33_RS14810 SM00028 Tetratricopeptide repeats BSQ33_RS14815 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BSQ33_RS14835 SM00344 helix_turn_helix ASNC type BSQ33_RS14840 SM00843 BSQ33_RS14840 BSQ33_RS14855 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSQ33_RS14910 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS14935 SM00421 helix_turn_helix, Lux Regulon BSQ33_RS14945 SM00487 DEAD-like helicases superfamily BSQ33_RS14945 SM00490 helicase superfamily c-terminal domain BSQ33_RS14945 SM00982 BSQ33_RS14945 BSQ33_RS14945 SM01058 CarD-like/TRCF domain BSQ33_RS14960 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS14975 SM00849 Metallo-beta-lactamase superfamily BSQ33_RS14980 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS15010 SM00763 PrkA AAA domain BSQ33_RS15025 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_RS15055 SM00491 BSQ33_RS15055 BSQ33_RS15085 SM00840 BSQ33_RS15085 BSQ33_RS15095 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BSQ33_RS15100 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS15155 SM00028 Tetratricopeptide repeats BSQ33_RS15185 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_RS15190 SM00367 Leucine-rich repeat - CC (cysteine-containing) subfamily BSQ33_RS15200 SM00829 Enoylreductase BSQ33_RS15205 SM00900 BSQ33_RS15205 BSQ33_RS15220 SM00091 PAS domain BSQ33_RS15220 SM00387 Histidine kinase-like ATPases BSQ33_RS15230 SM00448 cheY-homologous receiver domain BSQ33_RS15245 SM00813 Alpha-L-arabinofuranosidase C-terminus BSQ33_RS15265 SM00487 DEAD-like helicases superfamily BSQ33_RS15265 SM00490 helicase superfamily c-terminal domain BSQ33_RS15280 SM00923 MbtH-like protein BSQ33_RS15285 SM00823 Phosphopantetheine attachment site BSQ33_RS15285 SM00824 Thioesterase BSQ33_RS15290 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS15335 SM00354 helix_turn _helix lactose operon repressor BSQ33_RS15360 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_RS15385 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_RS15465 SM00028 Tetratricopeptide repeats BSQ33_RS15490 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS15510 SM00354 helix_turn _helix lactose operon repressor BSQ33_RS15525 SM00245 tail specific protease BSQ33_RS15540 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS15545 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS15610 SM00448 cheY-homologous receiver domain BSQ33_RS15615 SM00387 Histidine kinase-like ATPases BSQ33_RS15630 SM00729 Elongator protein 3, MiaB family, Radical SAM BSQ33_RS15645 SM00344 helix_turn_helix ASNC type BSQ33_RS15655 SM00062 Bacterial periplasmic substrate-binding proteins BSQ33_RS15655 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BSQ33_RS15665 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS15720 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_RS15720 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_RS15740 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS15755 SM00100 Cyclic nucleotide-monophosphate binding domain BSQ33_RS15775 SM00052 Putative diguanylate phosphodiesterase BSQ33_RS15775 SM00267 diguanylate cyclase BSQ33_RS15865 SM01061 CAT RNA binding domain BSQ33_RS15990 SM00387 Histidine kinase-like ATPases BSQ33_RS15990 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_RS15990 SM00448 cheY-homologous receiver domain BSQ33_RS16010 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_RS16045 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS16195 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_RS16210 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_RS16220 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_RS16235 SM01234 BSQ33_RS16235 BSQ33_RS16310 SM01350 BSQ33_RS16310 BSQ33_RS16330 SM00481 DNA polymerase alpha chain like domain BSQ33_RS16355 SM00829 Enoylreductase BSQ33_RS16390 SM00267 diguanylate cyclase BSQ33_RS16395 SM00387 Histidine kinase-like ATPases BSQ33_RS16395 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_RS16400 SM00897 FIST N domain BSQ33_RS16400 SM01204 BSQ33_RS16400 BSQ33_RS16405 SM00244 prohibitin homologues BSQ33_RS16415 SM00479 BSQ33_RS16415 BSQ33_RS16420 SM00116 Domain in cystathionine beta-synthase and other proteins. BSQ33_RS16445 SM00387 Histidine kinase-like ATPases BSQ33_RS16445 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_RS16445 SM00448 cheY-homologous receiver domain BSQ33_RS16465 SM00530 Helix-turn-helix XRE-family like proteins BSQ33_RS16475 SM00052 Putative diguanylate phosphodiesterase BSQ33_RS16475 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BSQ33_RS16475 SM00091 PAS domain BSQ33_RS16475 SM00267 diguanylate cyclase BSQ33_RS16495 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_RS16495 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_RS16500 SM00354 helix_turn _helix lactose operon repressor BSQ33_RS16525 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS16540 SM00354 helix_turn _helix lactose operon repressor BSQ33_RS16570 SM00271 DnaJ molecular chaperone homology domain BSQ33_RS16575 SM00052 Putative diguanylate phosphodiesterase BSQ33_RS16575 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BSQ33_RS16575 SM00267 diguanylate cyclase BSQ33_RS16590 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS16640 SM00360 RNA recognition motif BSQ33_RS16665 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS16670 SM00327 von Willebrand factor (vWF) type A domain BSQ33_RS16755 SM00387 Histidine kinase-like ATPases BSQ33_RS16755 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_RS16755 SM00448 cheY-homologous receiver domain BSQ33_RS16790 SM00851 MGS-like domain BSQ33_RS16805 SM00822 BSQ33_RS16805 BSQ33_RS16850 SM00316 Ribosomal protein S1-like RNA-binding domain BSQ33_RS16850 SM00357 Cold shock protein domain BSQ33_RS16850 SM00955 BSQ33_RS16850 BSQ33_RS16855 SM00487 DEAD-like helicases superfamily BSQ33_RS16855 SM00490 helicase superfamily c-terminal domain BSQ33_RS16870 SM00829 Enoylreductase BSQ33_RS16875 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_RS16875 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_RS16880 SM00267 diguanylate cyclase BSQ33_RS16880 SM01079 BSQ33_RS16880 BSQ33_RS16890 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS16900 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BSQ33_RS16900 SM00091 PAS domain BSQ33_RS16900 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_RS16905 SM00052 Putative diguanylate phosphodiesterase BSQ33_RS16930 SM00421 helix_turn_helix, Lux Regulon BSQ33_RS16965 SM00487 DEAD-like helicases superfamily BSQ33_RS16965 SM00490 helicase superfamily c-terminal domain BSQ33_RS16970 SM00487 DEAD-like helicases superfamily BSQ33_RS16970 SM00490 helicase superfamily c-terminal domain BSQ33_RS17030 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSQ33_RS17030 SM00866 BSQ33_RS17030 BSQ33_RS17035 SM00450 Rhodanese Homology Domain BSQ33_RS17045 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BSQ33_RS17070 SM00287 Bacterial SH3 domain homologues BSQ33_RS17080 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS17090 SM01321 BSQ33_RS17090 BSQ33_RS17130 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BSQ33_RS17135 SM01092 CO dehydrogenase flavoprotein C-terminal domain BSQ33_RS17155 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS17165 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_RS17165 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_RS17175 SM00267 diguanylate cyclase BSQ33_RS17190 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS17215 SM00899 BSQ33_RS17215 BSQ33_RS17250 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS17255 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_RS17270 SM00893 Electron transfer flavoprotein domain BSQ33_RS17275 SM00893 Electron transfer flavoprotein domain BSQ33_RS17290 SM00267 diguanylate cyclase BSQ33_RS17305 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BSQ33_RS17305 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BSQ33_RS17315 SM00387 Histidine kinase-like ATPases BSQ33_RS17315 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_RS17320 SM00448 cheY-homologous receiver domain BSQ33_RS17320 SM00862 Transcriptional regulatory protein, C terminal BSQ33_RS17370 SM00881 CoA binding domain BSQ33_RS17390 SM00782 PhnA Zinc-Ribbon BSQ33_RS17420 SM00867 YceI-like domain BSQ33_RS17435 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BSQ33_RS17440 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS17470 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSQ33_RS17470 SM00866 BSQ33_RS17470 BSQ33_RS17500 SM00852 Probable molybdopterin binding domain BSQ33_RS17510 SM00450 Rhodanese Homology Domain BSQ33_RS17525 SM00861 Transketolase, pyrimidine binding domain BSQ33_RS17570 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BSQ33_RS17580 SM00530 Helix-turn-helix XRE-family like proteins BSQ33_RS17725 SM00530 Helix-turn-helix XRE-family like proteins BSQ33_RS17740 SM00344 helix_turn_helix ASNC type BSQ33_RS17755 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS17780 SM00354 helix_turn _helix lactose operon repressor BSQ33_RS17800 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS17860 SM01101 BSQ33_RS17860 BSQ33_RS17885 SM00487 DEAD-like helicases superfamily BSQ33_RS17885 SM00490 helicase superfamily c-terminal domain BSQ33_RS17950 SM00387 Histidine kinase-like ATPases BSQ33_RS17950 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_RS17955 SM00448 cheY-homologous receiver domain BSQ33_RS17955 SM00862 Transcriptional regulatory protein, C terminal BSQ33_RS17970 SM00354 helix_turn _helix lactose operon repressor BSQ33_RS17995 SM00633 Glycosyl hydrolase family 10 BSQ33_RS18025 SM00052 Putative diguanylate phosphodiesterase BSQ33_RS18025 SM00267 diguanylate cyclase BSQ33_RS18025 SM00448 cheY-homologous receiver domain BSQ33_RS18030 SM00387 Histidine kinase-like ATPases BSQ33_RS18030 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_RS18030 SM01079 BSQ33_RS18030 BSQ33_RS18065 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_RS18145 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS18160 SM00062 Bacterial periplasmic substrate-binding proteins BSQ33_RS18160 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BSQ33_RS18170 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSQ33_RS18170 SM00895 BSQ33_RS18170 BSQ33_RS18180 SM00606 Cellulose Binding Domain Type IV BSQ33_RS18185 SM01217 BSQ33_RS18185 BSQ33_RS18195 SM00530 Helix-turn-helix XRE-family like proteins BSQ33_RS18200 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_RS18340 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BSQ33_RS18340 SM00267 diguanylate cyclase BSQ33_RS18410 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BSQ33_RS18450 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS18500 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_RS18540 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_RS18615 SM00420 helix_turn_helix, Deoxyribose operon repressor BSQ33_RS18615 SM01134 BSQ33_RS18615 BSQ33_RS18690 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_RS18695 SM01217 BSQ33_RS18695 BSQ33_RS18715 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS18720 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS18745 SM00357 Cold shock protein domain BSQ33_RS18750 SM00422 helix_turn_helix, mercury resistance BSQ33_RS18765 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS18840 SM00855 Phosphoglycerate mutase family BSQ33_RS18845 SM00632 BSQ33_RS18845 BSQ33_RS18845 SM00642 Alpha-amylase domain BSQ33_RS18885 SM01321 BSQ33_RS18885 BSQ33_RS18900 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_RS18940 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS18955 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_RS18955 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_RS19000 SM00873 B3/4 domain BSQ33_RS19055 SM00422 helix_turn_helix, mercury resistance BSQ33_RS19070 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BSQ33_RS19085 SM00823 Phosphopantetheine attachment site BSQ33_RS19085 SM00825 Beta-ketoacyl synthase BSQ33_RS19085 SM00826 BSQ33_RS19085 BSQ33_RS19085 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BSQ33_RS19090 SM00822 BSQ33_RS19090 BSQ33_RS19090 SM00823 Phosphopantetheine attachment site BSQ33_RS19090 SM00825 Beta-ketoacyl synthase BSQ33_RS19090 SM00826 BSQ33_RS19090 BSQ33_RS19090 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BSQ33_RS19090 SM01294 BSQ33_RS19090 BSQ33_RS19095 SM00822 BSQ33_RS19095 BSQ33_RS19095 SM00823 Phosphopantetheine attachment site BSQ33_RS19095 SM00825 Beta-ketoacyl synthase BSQ33_RS19095 SM00826 BSQ33_RS19095 BSQ33_RS19095 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BSQ33_RS19095 SM00829 Enoylreductase BSQ33_RS19095 SM01294 BSQ33_RS19095 BSQ33_RS19100 SM00822 BSQ33_RS19100 BSQ33_RS19100 SM00823 Phosphopantetheine attachment site BSQ33_RS19100 SM00825 Beta-ketoacyl synthase BSQ33_RS19100 SM00826 BSQ33_RS19100 BSQ33_RS19100 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BSQ33_RS19100 SM00829 Enoylreductase BSQ33_RS19105 SM00822 BSQ33_RS19105 BSQ33_RS19105 SM00823 Phosphopantetheine attachment site BSQ33_RS19105 SM00825 Beta-ketoacyl synthase BSQ33_RS19105 SM00826 BSQ33_RS19105 BSQ33_RS19105 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BSQ33_RS19105 SM01294 BSQ33_RS19105 BSQ33_RS19110 SM00822 BSQ33_RS19110 BSQ33_RS19110 SM00823 Phosphopantetheine attachment site BSQ33_RS19110 SM00825 Beta-ketoacyl synthase BSQ33_RS19110 SM00826 BSQ33_RS19110 BSQ33_RS19110 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BSQ33_RS19110 SM01294 BSQ33_RS19110 BSQ33_RS19115 SM00822 BSQ33_RS19115 BSQ33_RS19115 SM00823 Phosphopantetheine attachment site BSQ33_RS19135 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_RS19155 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_RS19165 SM00953 BSQ33_RS19165 BSQ33_RS19175 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_RS19225 SM00860 SMI1 / KNR4 family BSQ33_RS19280 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_RS19290 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_RS19305 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_RS19330 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_RS19360 SM00671 Sel1-like repeats. BSQ33_RS19380 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_RS19435 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_RS19450 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_RS19490 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_RS19535 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_RS19555 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_RS19570 SM00860 SMI1 / KNR4 family BSQ33_RS19590 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_RS19615 SM00912 haemagglutination activity domain BSQ33_RS19640 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_RS19675 SM00917 LeuA allosteric (dimerisation) domain BSQ33_RS19680 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_RS19700 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_RS19735 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_RS19810 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_RS19860 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS19865 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS19865 SM01086 C-terminal, D2-small domain, of ClpB protein BSQ33_RS19930 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_RS19930 SM00897 FIST N domain BSQ33_RS19930 SM01204 BSQ33_RS19930 BSQ33_RS19935 SM00354 helix_turn _helix lactose operon repressor BSQ33_RS19975 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS20040 SM00954 Region found in RelA / SpoT proteins BSQ33_RS20060 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_RS20090 SM00606 Cellulose Binding Domain Type IV BSQ33_RS20135 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_RS20135 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_RS20150 SM00347 helix_turn_helix multiple antibiotic resistance protein BSQ33_RS20170 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_RS20170 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_RS20230 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_RS20260 SM00052 Putative diguanylate phosphodiesterase BSQ33_RS20260 SM00267 diguanylate cyclase BSQ33_RS20265 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS20280 SM00470 ParB-like nuclease domain BSQ33_RS20345 SM00642 Alpha-amylase domain BSQ33_RS20375 SM00347 helix_turn_helix multiple antibiotic resistance protein BSQ33_RS20405 SM01266 BSQ33_RS20405 BSQ33_RS20460 SM00052 Putative diguanylate phosphodiesterase BSQ33_RS20460 SM00267 diguanylate cyclase BSQ33_RS20480 SM00797 Allophanate hydrolase subunit 2 BSQ33_RS20485 SM00796 Allophanate hydrolase subunit 1 BSQ33_RS20505 SM00062 Bacterial periplasmic substrate-binding proteins BSQ33_RS20510 SM00924 MgtE intracellular N domain BSQ33_RS20525 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS20530 SM00028 Tetratricopeptide repeats BSQ33_RS20535 SM00530 Helix-turn-helix XRE-family like proteins BSQ33_RS20540 SM01057 Eukaryotic-type carbonic anhydrase BSQ33_RS20560 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BSQ33_RS20565 SM00387 Histidine kinase-like ATPases BSQ33_RS20570 SM00387 Histidine kinase-like ATPases BSQ33_RS20595 SM00257 Lysin motif BSQ33_RS20630 SM00529 Helix-turn-helix diphteria tox regulatory element BSQ33_RS20645 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_RS20680 SM00344 helix_turn_helix ASNC type BSQ33_RS20700 SM00098 Alkaline phosphatase homologues BSQ33_RS20725 SM01236 BSQ33_RS20725 BSQ33_RS20735 SM00448 cheY-homologous receiver domain BSQ33_RS20735 SM00862 Transcriptional regulatory protein, C terminal BSQ33_RS20740 SM00387 Histidine kinase-like ATPases BSQ33_RS20740 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_RS20745 SM00822 BSQ33_RS20745 BSQ33_RS20780 SM00870 BSQ33_RS20780 BSQ33_RS20790 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_RS20790 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_RS20810 SM01091 Transporter associated domain BSQ33_RS20830 SM00267 diguanylate cyclase BSQ33_RS20830 SM01079 BSQ33_RS20830 BSQ33_RS20835 SM00530 Helix-turn-helix XRE-family like proteins BSQ33_RS20845 SM00260 Two component signalling adaptor domain BSQ33_RS20845 SM00448 cheY-homologous receiver domain BSQ33_RS20850 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BSQ33_RS20850 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_RS20885 SM01351 BSQ33_RS20885 BSQ33_RS20905 SM00347 helix_turn_helix multiple antibiotic resistance protein BSQ33_RS20925 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_RS20925 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_RS20930 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_RS20930 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_RS20940 SM00062 Bacterial periplasmic substrate-binding proteins BSQ33_RS20955 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS20960 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_RS21000 SM00886 Stress responsive A/B Barrel Domain BSQ33_RS21005 SM00344 helix_turn_helix ASNC type BSQ33_RS21015 SM01038 Beta galactosidase small chain BSQ33_RS21030 SM00028 Tetratricopeptide repeats BSQ33_RS21035 SM00327 von Willebrand factor (vWF) type A domain BSQ33_RS21055 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_RS21055 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_RS21085 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BSQ33_RS21085 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS21090 SM00357 Cold shock protein domain BSQ33_RS21105 SM00448 cheY-homologous receiver domain BSQ33_RS21110 SM00091 PAS domain BSQ33_RS21125 SM01240 BSQ33_RS21125 BSQ33_RS21165 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_RS21175 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_RS21220 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_RS21230 SM00563 Phosphate acyltransferases BSQ33_RS21235 SM00458 Ricin-type beta-trefoil BSQ33_RS21255 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_RS21295 SM00354 helix_turn _helix lactose operon repressor BSQ33_RS21300 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_RS21300 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_RS21310 SM00382 ATPases associated with a variety of cellular activities BSQ33_RS21315 SM00642 Alpha-amylase domain BSQ33_RS21320 SM00671 Sel1-like repeats. BSQ33_RS21335 SM00267 diguanylate cyclase BSQ33_RS21340 SM00028 Tetratricopeptide repeats BSQ33_RS21350 SM00422 helix_turn_helix, mercury resistance BSQ33_RS21360 SM00257 Lysin motif