locus-tag class description LA59_RS00025 PF08240 Alcohol dehydrogenase GroES-like domain LA59_RS00025 PF00107 Zinc-binding dehydrogenase LA59_RS00030 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LA59_RS00030 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LA59_RS00030 PF01276 Orn/Lys/Arg decarboxylase, major domain LA59_RS00035 PF13520 Amino acid permease LA59_RS00045 PF18500 CadC C-terminal domain 1 LA59_RS00045 PF00486 Transcriptional regulatory protein, C terminal LA59_RS00050 PF13411 MerR HTH family regulatory protein LA59_RS00060 PF01808 AICARFT/IMPCHase bienzyme LA59_RS00060 PF02142 MGS-like domain LA59_RS00065 PF02843 Phosphoribosylglycinamide synthetase, C domain LA59_RS00065 PF02844 Phosphoribosylglycinamide synthetase, N domain LA59_RS00065 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LA59_RS00075 PF00216 Bacterial DNA-binding protein LA59_RS00080 PF00571 CBS domain LA59_RS00080 PF01595 Cyclin M transmembrane N-terminal domain LA59_RS00085 PF04222 Protein of unknown function (DUF416) LA59_RS00090 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LA59_RS00095 PF03167 Uracil DNA glycosylase superfamily LA59_RS00100 PF01208 Uroporphyrinogen decarboxylase (URO-D) LA59_RS00115 PF00293 NUDIX domain LA59_RS00115 PF09297 NADH pyrophosphatase zinc ribbon domain LA59_RS00120 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ LA59_RS00125 PF04998 RNA polymerase Rpb1, domain 5 LA59_RS00125 PF05000 RNA polymerase Rpb1, domain 4 LA59_RS00125 PF04983 RNA polymerase Rpb1, domain 3 LA59_RS00125 PF00623 RNA polymerase Rpb1, domain 2 LA59_RS00125 PF04997 RNA polymerase Rpb1, domain 1 LA59_RS00130 PF04561 RNA polymerase Rpb2, domain 2 LA59_RS00130 PF10385 RNA polymerase beta subunit external 1 domain LA59_RS00130 PF00562 RNA polymerase Rpb2, domain 6 LA59_RS00130 PF04560 RNA polymerase Rpb2, domain 7 LA59_RS00130 PF04565 RNA polymerase Rpb2, domain 3 LA59_RS00130 PF04563 RNA polymerase beta subunit LA59_RS00135 PF00542 Ribosomal protein L7/L12 C-terminal domain LA59_RS00135 PF16320 Ribosomal protein L7/L12 dimerisation domain LA59_RS00140 PF00466 Ribosomal protein L10 LA59_RS00145 PF00687 Ribosomal protein L1p/L10e family LA59_RS00150 PF03946 Ribosomal protein L11, N-terminal domain LA59_RS00150 PF00298 Ribosomal protein L11, RNA binding domain LA59_RS00155 PF00467 KOW motif LA59_RS00155 PF02357 Transcription termination factor nusG LA59_RS00160 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LA59_RS00165 PF03144 Elongation factor Tu domain 2 LA59_RS00165 PF03143 Elongation factor Tu C-terminal domain LA59_RS00165 PF00009 Elongation factor Tu GTP binding domain LA59_RS00190 PF00485 Phosphoribulokinase / Uridine kinase family LA59_RS00195 PF03099 Biotin/lipoate A/B protein ligase family LA59_RS00195 PF02237 Biotin protein ligase C terminal domain LA59_RS00195 PF08279 HTH domain LA59_RS00200 PF01565 FAD binding domain LA59_RS00200 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LA59_RS00210 PF13091 PLD-like domain LA59_RS00285 PF01177 Asp/Glu/Hydantoin racemase LA59_RS00295 PF07715 TonB-dependent Receptor Plug Domain LA59_RS00295 PF00593 TonB dependent receptor LA59_RS00300 PF05958 tRNA (Uracil-5-)-methyltransferase LA59_RS00310 PF00440 Bacterial regulatory proteins, tetR family LA59_RS00315 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LA59_RS00315 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA59_RS00320 PF01554 MatE LA59_RS00330 PF00717 Peptidase S24-like LA59_RS00330 PF01726 LexA DNA binding domain LA59_RS00335 PF01553 Acyltransferase LA59_RS00340 PF01040 UbiA prenyltransferase family LA59_RS00345 PF04345 Chorismate lyase LA59_RS00350 PF03748 Flagellar basal body-associated protein FliL LA59_RS00355 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease LA59_RS00355 PF01694 Rhomboid family LA59_RS00360 PF00581 Rhodanese-like domain LA59_RS00365 PF04545 Sigma-70, region 4 LA59_RS00365 PF00140 Sigma-70 factor, region 1.2 LA59_RS00365 PF04542 Sigma-70 region 2 LA59_RS00370 PF18075 FtsX extracellular domain LA59_RS00375 PF00005 ABC transporter LA59_RS00380 PF00448 SRP54-type protein, GTPase domain LA59_RS00380 PF02881 SRP54-type protein, helical bundle domain LA59_RS00395 PF01914 MarC family integral membrane protein LA59_RS00415 PF10694 Protein of unknown function (DUF2500) LA59_RS00440 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LA59_RS00440 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LA59_RS00445 PF01022 Bacterial regulatory protein, arsR family LA59_RS00450 PF08668 HDOD domain LA59_RS00450 PF00563 EAL domain LA59_RS00455 PF01810 LysE type translocator LA59_RS00460 PF12146 Serine aminopeptidase, S33 LA59_RS00480 PF03942 DTW domain LA59_RS00485 PF00563 EAL domain LA59_RS00485 PF00990 Diguanylate cyclase, GGDEF domain LA59_RS00485 PF08495 FIST N domain LA59_RS00485 PF10442 FIST C domain LA59_RS00490 PF13419 Haloacid dehalogenase-like hydrolase LA59_RS00495 PF02899 Phage integrase, N-terminal SAM-like domain LA59_RS00495 PF00589 Phage integrase family LA59_RS00505 PF01678 Diaminopimelate epimerase LA59_RS00510 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LA59_RS00510 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LA59_RS00520 PF01491 Frataxin-like domain LA59_RS00525 PF12633 Adenylate cyclase NT domain LA59_RS00525 PF01295 Adenylate cyclase, class-I LA59_RS00530 PF03900 Porphobilinogen deaminase, C-terminal domain LA59_RS00530 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LA59_RS00535 PF02602 Uroporphyrinogen-III synthase HemD LA59_RS00540 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase LA59_RS00545 PF07219 HemY protein N-terminus LA59_RS00580 PF00175 Oxidoreductase NAD-binding domain LA59_RS00585 PF00111 2Fe-2S iron-sulfur cluster binding domain LA59_RS00590 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase LA59_RS00600 PF07498 Rho termination factor, N-terminal domain LA59_RS00600 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LA59_RS00600 PF07497 Rho termination factor, RNA-binding domain LA59_RS00605 PF00085 Thioredoxin LA59_RS00610 PF00270 DEAD/DEAH box helicase LA59_RS00610 PF00271 Helicase conserved C-terminal domain LA59_RS00615 PF02541 Ppx/GppA phosphatase family LA59_RS00620 PF02592 Putative vitamin uptake transporter LA59_RS00630 PF00271 Helicase conserved C-terminal domain LA59_RS00630 PF00270 DEAD/DEAH box helicase LA59_RS00630 PF09382 RQC domain LA59_RS00630 PF16124 RecQ zinc-binding LA59_RS00630 PF00570 HRDC domain LA59_RS00635 PF00892 EamA-like transporter family LA59_RS00645 PF01810 LysE type translocator LA59_RS00655 PF00580 UvrD/REP helicase N-terminal domain LA59_RS00655 PF13361 UvrD-like helicase C-terminal domain LA59_RS00665 PF05114 Protein of unknown function (DUF692) LA59_RS00685 PF07690 Major Facilitator Superfamily LA59_RS00690 PF03466 LysR substrate binding domain LA59_RS00690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_RS00695 PF01321 Creatinase/Prolidase N-terminal domain LA59_RS00695 PF00557 Metallopeptidase family M24 LA59_RS00695 PF01321 Creatinase/Prolidase N-terminal domain LA59_RS00695 PF00557 Metallopeptidase family M24 LA59_RS00700 PF06968 Biotin and Thiamin Synthesis associated domain LA59_RS00700 PF04055 Radical SAM superfamily LA59_RS00705 PF05690 Thiazole biosynthesis protein ThiG LA59_RS00710 PF02597 ThiS family LA59_RS00715 PF00899 ThiF family LA59_RS00720 PF02581 Thiamine monophosphate synthase LA59_RS00725 PF13667 ThiC-associated domain LA59_RS00725 PF01964 Radical SAM ThiC family LA59_RS00730 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LA59_RS00735 PF07732 Multicopper oxidase LA59_RS00735 PF00394 Multicopper oxidase LA59_RS00735 PF07731 Multicopper oxidase LA59_RS00775 PF00132 Bacterial transferase hexapeptide (six repeats) LA59_RS00785 PF01488 Shikimate / quinate 5-dehydrogenase LA59_RS00785 PF08501 Shikimate dehydrogenase substrate binding domain LA59_RS00785 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LA59_RS00790 PF01218 Coproporphyrinogen III oxidase LA59_RS00795 PF01300 Telomere recombination LA59_RS00800 PF00731 AIR carboxylase LA59_RS00805 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LA59_RS00805 PF02222 ATP-grasp domain LA59_RS00810 PF01396 Topoisomerase DNA binding C4 zinc finger LA59_RS00815 PF04361 Protein of unknown function (DUF494) LA59_RS00820 PF02481 DNA recombination-mediator protein A LA59_RS00820 PF17782 DprA winged helix domain LA59_RS00830 PF01327 Polypeptide deformylase LA59_RS00835 PF02911 Formyl transferase, C-terminal domain LA59_RS00835 PF00551 Formyl transferase LA59_RS00840 PF01189 16S rRNA methyltransferase RsmB/F LA59_RS00840 PF01029 NusB family LA59_RS00845 PF02080 TrkA-C domain LA59_RS00845 PF02254 TrkA-N domain LA59_RS00850 PF02386 Cation transport protein LA59_RS00860 PF03006 Haemolysin-III related LA59_RS00865 PF07070 SpoOM protein LA59_RS00870 PF06288 Protein of unknown function (DUF1040) LA59_RS00875 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase LA59_RS00875 PF12801 4Fe-4S binding domain LA59_RS00875 PF13746 4Fe-4S dicluster domain LA59_RS00880 PF01636 Phosphotransferase enzyme family LA59_RS00885 PF01323 DSBA-like thioredoxin domain LA59_RS00890 PF01553 Acyltransferase LA59_RS00900 PF00990 Diguanylate cyclase, GGDEF domain LA59_RS00900 PF08448 PAS fold LA59_RS00905 PF13335 Magnesium chelatase, subunit ChlI C-terminal LA59_RS00905 PF01078 Magnesium chelatase, subunit ChlI LA59_RS00910 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LA59_RS00910 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LA59_RS00910 PF00205 Thiamine pyrophosphate enzyme, central domain LA59_RS00920 PF01063 Amino-transferase class IV LA59_RS00925 PF00920 Dehydratase family LA59_RS00930 PF00291 Pyridoxal-phosphate dependent enzyme LA59_RS00930 PF00585 C-terminal regulatory domain of Threonine dehydratase LA59_RS00935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_RS00935 PF03466 LysR substrate binding domain LA59_RS00940 PF07690 Major Facilitator Superfamily LA59_RS00945 PF00497 Bacterial extracellular solute-binding proteins, family 3 LA59_RS00950 PF00528 Binding-protein-dependent transport system inner membrane component LA59_RS00955 PF00132 Bacterial transferase hexapeptide (six repeats) LA59_RS00955 PF12804 MobA-like NTP transferase domain LA59_RS00960 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LA59_RS00960 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LA59_RS00965 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LA59_RS00965 PF02874 ATP synthase alpha/beta family, beta-barrel domain LA59_RS00970 PF00231 ATP synthase LA59_RS00975 PF00306 ATP synthase alpha/beta chain, C terminal domain LA59_RS00975 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LA59_RS00975 PF02874 ATP synthase alpha/beta family, beta-barrel domain LA59_RS00980 PF00213 ATP synthase delta (OSCP) subunit LA59_RS00985 PF00430 ATP synthase B/B' CF(0) LA59_RS00990 PF00137 ATP synthase subunit C LA59_RS00995 PF00119 ATP synthase A chain LA59_RS01000 PF03899 ATP synthase I chain LA59_RS01005 PF02195 ParB-like nuclease domain LA59_RS01005 PF17762 HTH domain found in ParB protein LA59_RS01010 PF13614 AAA domain LA59_RS01015 PF02527 rRNA small subunit methyltransferase G LA59_RS01020 PF01134 Glucose inhibited division protein A LA59_RS01020 PF13932 GidA associated domain LA59_RS01025 PF00258 Flavodoxin LA59_RS01030 PF12631 MnmE helical domain LA59_RS01030 PF10396 GTP-binding protein TrmE N-terminus LA59_RS01030 PF01926 50S ribosome-binding GTPase LA59_RS01035 PF02096 60Kd inner membrane protein LA59_RS01035 PF14849 YidC periplasmic domain LA59_RS01040 PF00825 Ribonuclease P LA59_RS01045 PF00468 Ribosomal protein L34 LA59_RS01050 PF00005 ABC transporter LA59_RS01055 PF00528 Binding-protein-dependent transport system inner membrane component LA59_RS01060 PF00497 Bacterial extracellular solute-binding proteins, family 3 LA59_RS01065 PF00308 Bacterial dnaA protein LA59_RS01065 PF08299 Bacterial dnaA protein helix-turn-helix LA59_RS01065 PF11638 DnaA N-terminal domain LA59_RS01070 PF02767 DNA polymerase III beta subunit, central domain LA59_RS01070 PF02768 DNA polymerase III beta subunit, C-terminal domain LA59_RS01070 PF00712 DNA polymerase III beta subunit, N-terminal domain LA59_RS01075 PF02463 RecF/RecN/SMC N terminal domain LA59_RS01080 PF00204 DNA gyrase B LA59_RS01080 PF18053 DNA gyrase B subunit insert domain LA59_RS01080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_RS01080 PF01751 Toprim domain LA59_RS01080 PF00986 DNA gyrase B subunit, carboxyl terminus LA59_RS01085 PF00011 Hsp20/alpha crystallin family LA59_RS01090 PF00155 Aminotransferase class I and II LA59_RS01095 PF00128 Alpha amylase, catalytic domain LA59_RS01100 PF02092 Glycyl-tRNA synthetase beta subunit LA59_RS01100 PF05746 DALR anticodon binding domain LA59_RS01105 PF02091 Glycyl-tRNA synthetase alpha subunit LA59_RS01110 PF01169 Uncharacterized protein family UPF0016 LA59_RS01120 PF01206 Sulfurtransferase TusA LA59_RS01130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_RS01130 PF03466 LysR substrate binding domain LA59_RS01135 PF00107 Zinc-binding dehydrogenase LA59_RS01135 PF08240 Alcohol dehydrogenase GroES-like domain LA59_RS01140 PF02803 Thiolase, C-terminal domain LA59_RS01140 PF00108 Thiolase, N-terminal domain LA59_RS01145 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LA59_RS01145 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LA59_RS01145 PF00378 Enoyl-CoA hydratase/isomerase LA59_RS01150 PF01205 Uncharacterized protein family UPF0029 LA59_RS01150 PF09186 Domain of unknown function (DUF1949) LA59_RS01155 PF02386 Cation transport protein LA59_RS01160 PF12724 Flavodoxin domain LA59_RS01205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_RS01205 PF03466 LysR substrate binding domain LA59_RS01210 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LA59_RS01210 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LA59_RS01215 PF04380 Membrane fusogenic activity LA59_RS01220 PF00873 AcrB/AcrD/AcrF family LA59_RS01225 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LA59_RS01230 PF08359 YsiA-like protein, C-terminal region LA59_RS01230 PF00440 Bacterial regulatory proteins, tetR family LA59_RS01235 PF00580 UvrD/REP helicase N-terminal domain LA59_RS01235 PF13361 UvrD-like helicase C-terminal domain LA59_RS01240 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LA59_RS01270 PF13419 Haloacid dehalogenase-like hydrolase LA59_RS01280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LA59_RS01280 PF00005 ABC transporter LA59_RS01285 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LA59_RS01290 PF00528 Binding-protein-dependent transport system inner membrane component LA59_RS01295 PF12911 N-terminal TM domain of oligopeptide transport permease C LA59_RS01295 PF00528 Binding-protein-dependent transport system inner membrane component LA59_RS01325 PF00069 Protein kinase domain LA59_RS01330 PF00356 Bacterial regulatory proteins, lacI family LA59_RS01330 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LA59_RS01335 PF03466 LysR substrate binding domain LA59_RS01335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_RS01340 PF00893 Small Multidrug Resistance protein LA59_RS01345 PF00893 Small Multidrug Resistance protein LA59_RS01355 PF00920 Dehydratase family LA59_RS01360 PF01202 Shikimate kinase LA59_RS01365 PF02447 GntP family permease LA59_RS01370 PF01081 KDPG and KHG aldolase LA59_RS01375 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LA59_RS01375 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA59_RS01385 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LA59_RS01390 PF01432 Peptidase family M3 LA59_RS01395 PF01037 Lrp/AsnC ligand binding domain LA59_RS01400 PF00563 EAL domain LA59_RS01400 PF08448 PAS fold LA59_RS01400 PF00990 Diguanylate cyclase, GGDEF domain LA59_RS01405 PF04445 Putative SAM-dependent methyltransferase LA59_RS01415 PF00892 EamA-like transporter family LA59_RS01420 PF00582 Universal stress protein family LA59_RS01425 PF00210 Ferritin-like domain LA59_RS01430 PF10625 Universal stress protein B (UspB) LA59_RS01445 PF00990 Diguanylate cyclase, GGDEF domain LA59_RS01445 PF03707 Bacterial signalling protein N terminal repeat LA59_RS01445 PF00563 EAL domain LA59_RS01455 PF02646 RmuC family LA59_RS01460 PF01209 ubiE/COQ5 methyltransferase family LA59_RS01465 PF02036 SCP-2 sterol transfer family LA59_RS01470 PF03109 ABC1 family LA59_RS01475 PF02416 mttA/Hcf106 family LA59_RS01480 PF02416 mttA/Hcf106 family LA59_RS01485 PF00902 Sec-independent protein translocase protein (TatC) LA59_RS01490 PF01026 TatD related DNase LA59_RS01495 PF00490 Delta-aminolevulinic acid dehydratase LA59_RS01505 PF01367 5'-3' exonuclease, C-terminal SAM fold LA59_RS01505 PF00476 DNA polymerase family A LA59_RS01505 PF01612 3'-5' exonuclease LA59_RS01505 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LA59_RS01510 PF01926 50S ribosome-binding GTPase LA59_RS01515 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LA59_RS01525 PF04220 Der GTPase activator (YihI) LA59_RS01535 PF06969 HemN C-terminal domain LA59_RS01535 PF04055 Radical SAM superfamily LA59_RS01540 PF00962 Adenosine/AMP deaminase LA59_RS01545 PF00563 EAL domain LA59_RS01545 PF00990 Diguanylate cyclase, GGDEF domain LA59_RS01545 PF03707 Bacterial signalling protein N terminal repeat LA59_RS01550 PF02954 Bacterial regulatory protein, Fis family LA59_RS01550 PF00072 Response regulator receiver domain LA59_RS01550 PF00158 Sigma-54 interaction domain LA59_RS01555 PF00989 PAS fold LA59_RS01555 PF00512 His Kinase A (phospho-acceptor) domain LA59_RS01555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_RS01565 PF00120 Glutamine synthetase, catalytic domain LA59_RS01565 PF03951 Glutamine synthetase, beta-Grasp domain LA59_RS01570 PF00009 Elongation factor Tu GTP binding domain LA59_RS01570 PF03144 Elongation factor Tu domain 2 LA59_RS01570 PF00679 Elongation factor G C-terminus LA59_RS01585 PF03631 Virulence factor BrkB LA59_RS01590 PF02580 D-Tyr-tRNA(Tyr) deacylase LA59_RS01595 PF00583 Acetyltransferase (GNAT) family LA59_RS01595 PF09500 Putative thioesterase (yiiD_Cterm) LA59_RS01605 PF01293 Phosphoenolpyruvate carboxykinase LA59_RS01610 PF01430 Hsp33 protein LA59_RS01615 PF01479 S4 domain LA59_RS01620 PF11356 Type II secretion system protein C LA59_RS01625 PF00263 Bacterial type II and III secretion system protein LA59_RS01625 PF03958 Bacterial type II/III secretion system short domain LA59_RS01630 PF00437 Type II/IV secretion system protein LA59_RS01635 PF00482 Type II secretion system (T2SS), protein F LA59_RS01640 PF08334 Type II secretion system (T2SS), protein G LA59_RS01640 PF07963 Prokaryotic N-terminal methylation motif LA59_RS01645 PF12019 Type II transport protein GspH LA59_RS01650 PF07963 Prokaryotic N-terminal methylation motif LA59_RS01650 PF02501 Type II secretion system (T2SS), protein I LA59_RS01655 PF11612 Type II secretion system (T2SS), protein J LA59_RS01655 PF07963 Prokaryotic N-terminal methylation motif LA59_RS01660 PF03934 Type II secretion system (T2SS), protein K LA59_RS01665 PF05134 Type II secretion system (T2SS), protein L LA59_RS01665 PF12693 GspL periplasmic domain LA59_RS01670 PF04612 Type II secretion system (T2SS), protein M LA59_RS01675 PF01203 Type II secretion system (T2SS), protein N LA59_RS01680 PF00459 Inositol monophosphatase family LA59_RS01685 PF00293 NUDIX domain LA59_RS01690 PF01521 Iron-sulphur cluster biosynthesis LA59_RS01690 PF01106 NifU-like domain LA59_RS01695 PF00156 Phosphoribosyl transferase domain LA59_RS01700 PF00561 alpha/beta hydrolase fold LA59_RS01710 PF16921 Tex protein YqgF-like domain LA59_RS01710 PF09371 Tex-like protein N-terminal domain LA59_RS01710 PF00575 S1 RNA binding domain LA59_RS01710 PF17674 HHH domain LA59_RS01720 PF03449 Transcription elongation factor, N-terminal LA59_RS01720 PF01272 Transcription elongation factor, GreA/GreB, C-term LA59_RS01725 PF00486 Transcriptional regulatory protein, C terminal LA59_RS01725 PF00072 Response regulator receiver domain LA59_RS01730 PF00672 HAMP domain LA59_RS01730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_RS01730 PF00512 His Kinase A (phospho-acceptor) domain LA59_RS01735 PF00860 Permease family LA59_RS01740 PF00326 Prolyl oligopeptidase family LA59_RS01745 PF17191 RecG wedge domain LA59_RS01745 PF00270 DEAD/DEAH box helicase LA59_RS01745 PF00271 Helicase conserved C-terminal domain LA59_RS01750 PF12105 SpoU, rRNA methylase, C-terminal LA59_RS01750 PF00588 SpoU rRNA Methylase family LA59_RS01755 PF02824 TGS domain LA59_RS01755 PF04607 Region found in RelA / SpoT proteins LA59_RS01755 PF13291 ACT domain LA59_RS01760 PF01192 RNA polymerase Rpb6 LA59_RS01765 PF00625 Guanylate kinase LA59_RS01780 PF02472 Biopolymer transport protein ExbD/TolR LA59_RS01785 PF01618 MotA/TolQ/ExbB proton channel family LA59_RS01800 PF07715 TonB-dependent Receptor Plug Domain LA59_RS01800 PF00593 TonB dependent receptor LA59_RS01805 PF00528 Binding-protein-dependent transport system inner membrane component LA59_RS01810 PF12911 N-terminal TM domain of oligopeptide transport permease C LA59_RS01810 PF00528 Binding-protein-dependent transport system inner membrane component LA59_RS01815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LA59_RS01820 PF00005 ABC transporter LA59_RS01820 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LA59_RS01825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LA59_RS01825 PF00005 ABC transporter LA59_RS01840 PF00892 EamA-like transporter family LA59_RS01850 PF00072 Response regulator receiver domain LA59_RS01850 PF00486 Transcriptional regulatory protein, C terminal LA59_RS01855 PF08340 Domain of unknown function (DUF1732) LA59_RS01855 PF03755 YicC-like family, N-terminal region LA59_RS01860 PF03725 3' exoribonuclease family, domain 2 LA59_RS01860 PF01138 3' exoribonuclease family, domain 1 LA59_RS01865 PF00156 Phosphoribosyl transferase domain LA59_RS01870 PF03279 Bacterial lipid A biosynthesis acyltransferase LA59_RS01875 PF00440 Bacterial regulatory proteins, tetR family LA59_RS01880 PF02441 Flavoprotein LA59_RS01880 PF04127 DNA / pantothenate metabolism flavoprotein LA59_RS01885 PF00672 HAMP domain LA59_RS01885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_RS01885 PF17200 Single Cache domain 2 LA59_RS01890 PF04002 RadC-like JAB domain LA59_RS01895 PF00830 Ribosomal L28 family LA59_RS01900 PF00471 Ribosomal protein L33 LA59_RS01905 PF00884 Sulfatase LA59_RS01915 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LA59_RS01915 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LA59_RS01915 PF06827 Zinc finger found in FPG and IleRS LA59_RS01920 PF01467 Cytidylyltransferase-like LA59_RS01925 PF05686 Glycosyl transferase family 90 LA59_RS01930 PF00535 Glycosyl transferase family 2 LA59_RS01935 PF00535 Glycosyl transferase family 2 LA59_RS01940 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LA59_RS01945 PF01219 Prokaryotic diacylglycerol kinase LA59_RS01955 PF16363 GDP-mannose 4,6 dehydratase LA59_RS01960 PF00483 Nucleotidyl transferase LA59_RS01965 PF01842 ACT domain LA59_RS01965 PF00551 Formyl transferase LA59_RS01970 PF08889 WbqC-like protein family LA59_RS01975 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LA59_RS01985 PF02719 Polysaccharide biosynthesis protein LA59_RS01990 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LA59_RS01995 PF02350 UDP-N-acetylglucosamine 2-epimerase LA59_RS02000 PF08666 SAF domain LA59_RS02000 PF03102 NeuB family LA59_RS02010 PF00483 Nucleotidyl transferase LA59_RS02015 PF02348 Cytidylyltransferase LA59_RS02015 PF13472 GDSL-like Lipase/Acylhydrolase family LA59_RS02025 PF00202 Aminotransferase class-III LA59_RS02030 PF00795 Carbon-nitrogen hydrolase LA59_RS02050 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LA59_RS02055 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LA59_RS02060 PF03279 Bacterial lipid A biosynthesis acyltransferase LA59_RS02065 PF01370 NAD dependent epimerase/dehydratase family LA59_RS02070 PF06082 Exopolysaccharide biosynthesis protein YbjH LA59_RS02115 PF00483 Nucleotidyl transferase LA59_RS02120 PF16363 GDP-mannose 4,6 dehydratase LA59_RS02130 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LA59_RS02140 PF00535 Glycosyl transferase family 2 LA59_RS02155 PF13439 Glycosyltransferase Family 4 LA59_RS02155 PF00534 Glycosyl transferases group 1 LA59_RS02160 PF00535 Glycosyl transferase family 2 LA59_RS02165 PF00793 DAHP synthetase I family LA59_RS02170 PF02348 Cytidylyltransferase LA59_RS02175 PF01380 SIS domain LA59_RS02175 PF00571 CBS domain LA59_RS02180 PF00953 Glycosyl transferase family 4 LA59_RS02185 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LA59_RS02185 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LA59_RS02185 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LA59_RS02190 PF01370 NAD dependent epimerase/dehydratase family LA59_RS02195 PF00483 Nucleotidyl transferase LA59_RS02200 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LA59_RS02200 PF00753 Metallo-beta-lactamase superfamily LA59_RS02200 PF10996 Beta-Casp domain LA59_RS02205 PF00121 Triosephosphate isomerase LA59_RS02225 PF00455 DeoR C terminal sensor domain LA59_RS02225 PF08220 DeoR-like helix-turn-helix domain LA59_RS02230 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded LA59_RS02235 PF06005 Cell division protein ZapB LA59_RS02240 PF03737 Aldolase/RraA LA59_RS02245 PF01040 UbiA prenyltransferase family LA59_RS02250 PF00004 ATPase family associated with various cellular activities (AAA) LA59_RS02250 PF07724 AAA domain (Cdc48 subfamily) LA59_RS02255 PF00227 Proteasome subunit LA59_RS02265 PF00356 Bacterial regulatory proteins, lacI family LA59_RS02270 PF00270 DEAD/DEAH box helicase LA59_RS02270 PF00271 Helicase conserved C-terminal domain LA59_RS02270 PF17764 3′ DNA-binding domain (3′BD) LA59_RS02270 PF18074 Primosomal protein N C-terminal domain LA59_RS02270 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LA59_RS02275 PF01197 Ribosomal protein L31 LA59_RS02280 PF00338 Ribosomal protein S10p/S20e LA59_RS02285 PF00297 Ribosomal protein L3 LA59_RS02290 PF00573 Ribosomal protein L4/L1 family LA59_RS02295 PF00276 Ribosomal protein L23 LA59_RS02300 PF00181 Ribosomal Proteins L2, RNA binding domain LA59_RS02300 PF03947 Ribosomal Proteins L2, C-terminal domain LA59_RS02305 PF00203 Ribosomal protein S19 LA59_RS02310 PF00237 Ribosomal protein L22p/L17e LA59_RS02315 PF00189 Ribosomal protein S3, C-terminal domain LA59_RS02315 PF07650 KH domain LA59_RS02320 PF00252 Ribosomal protein L16p/L10e LA59_RS02325 PF00831 Ribosomal L29 protein LA59_RS02330 PF00366 Ribosomal protein S17 LA59_RS02335 PF00238 Ribosomal protein L14p/L23e LA59_RS02340 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LA59_RS02340 PF00467 KOW motif LA59_RS02345 PF00673 ribosomal L5P family C-terminus LA59_RS02345 PF00281 Ribosomal protein L5 LA59_RS02350 PF00253 Ribosomal protein S14p/S29e LA59_RS02355 PF00410 Ribosomal protein S8 LA59_RS02360 PF00347 Ribosomal protein L6 LA59_RS02365 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LA59_RS02370 PF00333 Ribosomal protein S5, N-terminal domain LA59_RS02370 PF03719 Ribosomal protein S5, C-terminal domain LA59_RS02375 PF00327 Ribosomal protein L30p/L7e LA59_RS02380 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LA59_RS02385 PF00344 SecY translocase LA59_RS02390 PF00444 Ribosomal protein L36 LA59_RS02395 PF00416 Ribosomal protein S13/S18 LA59_RS02400 PF00411 Ribosomal protein S11 LA59_RS02405 PF00163 Ribosomal protein S4/S9 N-terminal domain LA59_RS02405 PF01479 S4 domain LA59_RS02410 PF01000 RNA polymerase Rpb3/RpoA insert domain LA59_RS02410 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LA59_RS02410 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LA59_RS02415 PF01196 Ribosomal protein L17 LA59_RS02425 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LA59_RS02425 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LA59_RS02440 PF13673 Acetyltransferase (GNAT) domain LA59_RS02445 PF03880 DbpA RNA binding domain LA59_RS02445 PF00271 Helicase conserved C-terminal domain LA59_RS02445 PF00270 DEAD/DEAH box helicase LA59_RS02455 PF00149 Calcineurin-like phosphoesterase LA59_RS02455 PF02872 5'-nucleotidase, C-terminal domain LA59_RS02460 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LA59_RS02460 PF14824 Sirohaem biosynthesis protein central LA59_RS02460 PF10414 Sirohaem synthase dimerisation region LA59_RS02465 PF01507 Phosphoadenosine phosphosulfate reductase family LA59_RS02470 PF00009 Elongation factor Tu GTP binding domain LA59_RS02475 PF03600 Citrate transporter LA59_RS02475 PF02080 TrkA-C domain LA59_RS02500 PF00005 ABC transporter LA59_RS02510 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) LA59_RS02520 PF01625 Peptide methionine sulfoxide reductase LA59_RS02525 PF07244 Surface antigen variable number repeat LA59_RS02525 PF01103 Surface antigen LA59_RS02525 PF17243 POTRA domain TamA domain 1 LA59_RS02530 PF04357 TamB, inner membrane protein subunit of TAM complex LA59_RS02535 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like LA59_RS02545 PF00719 Inorganic pyrophosphatase LA59_RS02550 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LA59_RS02555 PF02875 Mur ligase family, glutamate ligase domain LA59_RS02555 PF01225 Mur ligase family, catalytic domain LA59_RS02555 PF08245 Mur ligase middle domain LA59_RS02560 PF02441 Flavoprotein LA59_RS02570 PF00528 Binding-protein-dependent transport system inner membrane component LA59_RS02575 PF00005 ABC transporter LA59_RS02595 PF01316 Arginine repressor, DNA binding domain LA59_RS02595 PF02863 Arginine repressor, C-terminal domain LA59_RS02600 PF00056 lactate/malate dehydrogenase, NAD binding domain LA59_RS02600 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LA59_RS02610 PF01609 Transposase DDE domain LA59_RS02610 PF13006 Insertion element 4 transposase N-terminal LA59_RS02615 PF00348 Polyprenyl synthetase LA59_RS02620 PF00829 Ribosomal prokaryotic L21 protein LA59_RS02625 PF01016 Ribosomal L27 protein LA59_RS02630 PF01926 50S ribosome-binding GTPase LA59_RS02630 PF01018 GTP1/OBG LA59_RS02635 PF06738 Putative threonine/serine exporter LA59_RS02640 PF12821 Threonine/Serine exporter, ThrE LA59_RS02645 PF00186 Dihydrofolate reductase LA59_RS02650 PF00149 Calcineurin-like phosphoesterase LA59_RS02655 PF04379 ApaG domain LA59_RS02660 PF00398 Ribosomal RNA adenine dimethylase LA59_RS02665 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LA59_RS02670 PF09312 SurA N-terminal domain LA59_RS02675 PF03968 OstA-like protein LA59_RS02675 PF04453 LPS transport system D LA59_RS02680 PF00226 DnaJ domain LA59_RS02680 PF05099 Tellurite resistance protein TerB LA59_RS02690 PF00694 Aconitase C-terminal domain LA59_RS02695 PF00330 Aconitase family (aconitate hydratase) LA59_RS02700 PF00180 Isocitrate/isopropylmalate dehydrogenase LA59_RS02705 PF08502 LeuA allosteric (dimerisation) domain LA59_RS02705 PF00682 HMGL-like LA59_RS02715 PF01569 PAP2 superfamily LA59_RS02725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_RS02725 PF03466 LysR substrate binding domain LA59_RS02730 PF00501 AMP-binding enzyme LA59_RS02735 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LA59_RS02735 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LA59_RS02735 PF00205 Thiamine pyrophosphate enzyme, central domain LA59_RS02740 PF10369 Small subunit of acetolactate synthase LA59_RS02745 PF17158 Membrane-associated sensor, integral membrane domain LA59_RS02745 PF00990 Diguanylate cyclase, GGDEF domain LA59_RS02755 PF02887 Pyruvate kinase, alpha/beta domain LA59_RS02755 PF00224 Pyruvate kinase, barrel domain LA59_RS02760 PF00455 DeoR C terminal sensor domain LA59_RS02760 PF08220 DeoR-like helix-turn-helix domain LA59_RS02765 PF01380 SIS domain LA59_RS02780 PF00486 Transcriptional regulatory protein, C terminal LA59_RS02780 PF00072 Response regulator receiver domain LA59_RS02785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_RS02785 PF00512 His Kinase A (phospho-acceptor) domain LA59_RS02785 PF00672 HAMP domain LA59_RS02790 PF13419 Haloacid dehalogenase-like hydrolase LA59_RS02795 PF05068 Mannitol repressor LA59_RS02800 PF01232 Mannitol dehydrogenase Rossmann domain LA59_RS02800 PF08125 Mannitol dehydrogenase C-terminal domain LA59_RS02805 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LA59_RS02805 PF02378 Phosphotransferase system, EIIC LA59_RS02805 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LA59_RS02835 PF00140 Sigma-70 factor, region 1.2 LA59_RS02835 PF03979 Sigma-70 factor, region 1.1 LA59_RS02835 PF04545 Sigma-70, region 4 LA59_RS02835 PF04546 Sigma-70, non-essential region LA59_RS02835 PF04542 Sigma-70 region 2 LA59_RS02835 PF04539 Sigma-70 region 3 LA59_RS02840 PF10410 DnaB-helicase binding domain of primase LA59_RS02840 PF01807 CHC2 zinc finger LA59_RS02840 PF08275 DNA primase catalytic core, N-terminal domain LA59_RS02840 PF08278 DNA primase DnaG DnaB-binding LA59_RS02845 PF09424 Yqey-like protein LA59_RS02850 PF01165 Ribosomal protein S21 LA59_RS02855 PF00814 Glycoprotease family LA59_RS02860 PF00561 alpha/beta hydrolase fold LA59_RS02865 PF02660 Glycerol-3-phosphate acyltransferase LA59_RS02870 PF02152 Dihydroneopterin aldolase LA59_RS02875 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LA59_RS02880 PF02673 Bacitracin resistance protein BacA LA59_RS02885 PF01743 Poly A polymerase head domain LA59_RS02885 PF01966 HD domain LA59_RS02885 PF12627 Probable RNA and SrmB- binding site of polymerase A LA59_RS02890 PF13401 AAA domain LA59_RS02890 PF01471 Putative peptidoglycan binding domain LA59_RS02900 PF08239 Bacterial SH3 domain LA59_RS02905 PF01384 Phosphate transporter family LA59_RS02910 PF01865 Protein of unknown function DUF47 LA59_RS02915 PF01928 CYTH domain LA59_RS02920 PF07885 Ion channel LA59_RS02925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_RS02925 PF00672 HAMP domain LA59_RS02925 PF02743 Cache domain LA59_RS02930 PF08335 GlnD PII-uridylyltransferase LA59_RS02930 PF03710 Glutamate-ammonia ligase adenylyltransferase LA59_RS02935 PF00294 pfkB family carbohydrate kinase LA59_RS02935 PF01467 Cytidylyltransferase-like LA59_RS02940 PF02321 Outer membrane efflux protein LA59_RS02945 PF00293 NUDIX domain LA59_RS02950 PF06853 Protein of unknown function (DUF1249) LA59_RS02955 PF00149 Calcineurin-like phosphoesterase LA59_RS02960 PF05728 Uncharacterised protein family (UPF0227) LA59_RS02965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_RS02965 PF00986 DNA gyrase B subunit, carboxyl terminus LA59_RS02965 PF00204 DNA gyrase B LA59_RS02965 PF01751 Toprim domain LA59_RS02970 PF00521 DNA gyrase/topoisomerase IV, subunit A LA59_RS02970 PF03989 DNA gyrase C-terminal domain, beta-propeller LA59_RS02975 PF13180 PDZ domain LA59_RS02980 PF00595 PDZ domain LA59_RS02990 PF06295 Protein of unknown function (DUF1043) LA59_RS02995 PF03969 AFG1-like ATPase LA59_RS03000 PF00572 Ribosomal protein L13 LA59_RS03005 PF00380 Ribosomal protein S9/S16 LA59_RS03010 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal LA59_RS03010 PF00355 Rieske [2Fe-2S] domain LA59_RS03015 PF00033 Cytochrome b/b6/petB LA59_RS03015 PF00032 Cytochrome b(C-terminal)/b6/petD LA59_RS03020 PF02167 Cytochrome C1 family LA59_RS03025 PF00043 Glutathione S-transferase, C-terminal domain LA59_RS03025 PF02798 Glutathione S-transferase, N-terminal domain LA59_RS03030 PF04386 Stringent starvation protein B LA59_RS03035 PF04972 BON domain LA59_RS03040 PF13580 SIS domain LA59_RS03045 PF02021 Uncharacterised protein family UPF0102 LA59_RS03050 PF04348 LppC putative lipoprotein LA59_RS03055 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LA59_RS03065 PF01795 MraW methylase family LA59_RS03070 PF04999 Cell division protein FtsL LA59_RS03075 PF03717 Penicillin-binding Protein dimerisation domain LA59_RS03075 PF00905 Penicillin binding protein transpeptidase domain LA59_RS03080 PF02875 Mur ligase family, glutamate ligase domain LA59_RS03080 PF08245 Mur ligase middle domain LA59_RS03080 PF01225 Mur ligase family, catalytic domain LA59_RS03085 PF01225 Mur ligase family, catalytic domain LA59_RS03085 PF08245 Mur ligase middle domain LA59_RS03085 PF02875 Mur ligase family, glutamate ligase domain LA59_RS03090 PF00953 Glycosyl transferase family 4 LA59_RS03090 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LA59_RS03095 PF08245 Mur ligase middle domain LA59_RS03095 PF02875 Mur ligase family, glutamate ligase domain LA59_RS03100 PF01098 Cell cycle protein LA59_RS03105 PF04101 Glycosyltransferase family 28 C-terminal domain LA59_RS03105 PF03033 Glycosyltransferase family 28 N-terminal domain LA59_RS03110 PF01225 Mur ligase family, catalytic domain LA59_RS03110 PF02875 Mur ligase family, glutamate ligase domain LA59_RS03110 PF08245 Mur ligase middle domain LA59_RS03115 PF08478 POTRA domain, FtsQ-type LA59_RS03115 PF03799 Cell division protein FtsQ LA59_RS03120 PF02491 SHS2 domain inserted in FTSA LA59_RS03125 PF12327 FtsZ family, C-terminal domain LA59_RS03125 PF00091 Tubulin/FtsZ family, GTPase domain LA59_RS03130 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LA59_RS03135 PF01043 SecA preprotein cross-linking domain LA59_RS03135 PF02810 SEC-C motif LA59_RS03135 PF07517 SecA DEAD-like domain LA59_RS03135 PF07516 SecA Wing and Scaffold domain LA59_RS03140 PF00293 NUDIX domain LA59_RS03145 PF01113 Dihydrodipicolinate reductase, N-terminus LA59_RS03145 PF05173 Dihydrodipicolinate reductase, C-terminus LA59_RS03150 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LA59_RS03150 PF00117 Glutamine amidotransferase class-I LA59_RS03155 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LA59_RS03155 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LA59_RS03155 PF02142 MGS-like domain LA59_RS03175 PF01925 Sulfite exporter TauE/SafE LA59_RS03180 PF03466 LysR substrate binding domain LA59_RS03180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_RS03185 PF03458 UPF0126 domain LA59_RS03190 PF01497 Periplasmic binding protein LA59_RS03200 PF01048 Phosphorylase superfamily LA59_RS03210 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA59_RS03210 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LA59_RS03215 PF01493 GXGXG motif LA59_RS03215 PF01645 Conserved region in glutamate synthase LA59_RS03215 PF04898 Glutamate synthase central domain LA59_RS03215 PF00310 Glutamine amidotransferases class-II LA59_RS03220 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA59_RS03220 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LA59_RS03225 PF00310 Glutamine amidotransferases class-II LA59_RS03225 PF04898 Glutamate synthase central domain LA59_RS03225 PF01493 GXGXG motif LA59_RS03225 PF01645 Conserved region in glutamate synthase LA59_RS03230 PF16199 Radical_SAM C-terminal domain LA59_RS03230 PF04055 Radical SAM superfamily LA59_RS03235 PF00990 Diguanylate cyclase, GGDEF domain LA59_RS03235 PF00360 Phytochrome region LA59_RS03235 PF00563 EAL domain LA59_RS03235 PF01590 GAF domain LA59_RS03245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_RS03245 PF00512 His Kinase A (phospho-acceptor) domain LA59_RS03245 PF18415 Histidine kinase receptor ArcB trans-membrane domain LA59_RS03245 PF00072 Response regulator receiver domain LA59_RS03245 PF00989 PAS fold LA59_RS03245 PF01627 Hpt domain LA59_RS03255 PF00072 Response regulator receiver domain LA59_RS03255 PF00486 Transcriptional regulatory protein, C terminal LA59_RS03265 PF03737 Aldolase/RraA LA59_RS03275 PF00696 Amino acid kinase family LA59_RS03275 PF01842 ACT domain LA59_RS03275 PF13840 ACT domain LA59_RS03275 PF00742 Homoserine dehydrogenase LA59_RS03275 PF03447 Homoserine dehydrogenase, NAD binding domain LA59_RS03280 PF08544 GHMP kinases C terminal LA59_RS03280 PF00288 GHMP kinases N terminal domain LA59_RS03285 PF14821 Threonine synthase N terminus LA59_RS03285 PF00291 Pyridoxal-phosphate dependent enzyme LA59_RS03290 PF03358 NADPH-dependent FMN reductase LA59_RS03295 PF01228 Glycine radical LA59_RS03300 PF01261 Xylose isomerase-like TIM barrel LA59_RS03305 PF03167 Uracil DNA glycosylase superfamily LA59_RS03320 PF01235 Sodium:alanine symporter family LA59_RS03325 PF03883 Peroxide stress protein YaaA LA59_RS03335 PF00271 Helicase conserved C-terminal domain LA59_RS03335 PF00270 DEAD/DEAH box helicase LA59_RS03340 PF05175 Methyltransferase small domain LA59_RS03345 PF05525 Branched-chain amino acid transport protein LA59_RS03350 PF00258 Flavodoxin LA59_RS03355 PF00589 Phage integrase family LA59_RS03355 PF02899 Phage integrase, N-terminal SAM-like domain LA59_RS03360 PF13098 Thioredoxin-like domain LA59_RS03360 PF10411 Disulfide bond isomerase protein N-terminus LA59_RS03365 PF17768 RecJ OB domain LA59_RS03365 PF02272 DHHA1 domain LA59_RS03365 PF01368 DHH family LA59_RS03370 PF03462 PCRF domain LA59_RS03370 PF00472 RF-1 domain LA59_RS03375 PF01336 OB-fold nucleic acid binding domain LA59_RS03375 PF00152 tRNA synthetases class II (D, K and N) LA59_RS03380 PF00072 Response regulator receiver domain LA59_RS03380 PF00158 Sigma-54 interaction domain LA59_RS03380 PF02954 Bacterial regulatory protein, Fis family LA59_RS03385 PF01609 Transposase DDE domain LA59_RS03385 PF13006 Insertion element 4 transposase N-terminal LA59_RS03395 PF00248 Aldo/keto reductase family LA59_RS03405 PF02976 DNA mismatch repair enzyme MutH LA59_RS03410 PF00293 NUDIX domain LA59_RS03415 PF02896 PEP-utilising enzyme, TIM barrel domain LA59_RS03415 PF01590 GAF domain LA59_RS03415 PF05524 PEP-utilising enzyme, N-terminal LA59_RS03415 PF00391 PEP-utilising enzyme, mobile domain LA59_RS03420 PF01925 Sulfite exporter TauE/SafE LA59_RS03425 PF01790 Prolipoprotein diacylglyceryl transferase LA59_RS03430 PF00303 Thymidylate synthase LA59_RS03435 PF02690 Na+/Pi-cotransporter LA59_RS03440 PF03466 LysR substrate binding domain LA59_RS03440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_RS03445 PF01022 Bacterial regulatory protein, arsR family LA59_RS03450 PF01649 Ribosomal protein S20 LA59_RS03455 PF03023 Lipid II flippase MurJ LA59_RS03460 PF06574 FAD synthetase LA59_RS03460 PF01687 Riboflavin kinase LA59_RS03465 PF06827 Zinc finger found in FPG and IleRS LA59_RS03465 PF00133 tRNA synthetases class I (I, L, M and V) LA59_RS03465 PF08264 Anticodon-binding domain of tRNA LA59_RS03470 PF01252 Signal peptidase (SPase) II LA59_RS03475 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LA59_RS03480 PF02401 LytB protein LA59_RS03485 PF00072 Response regulator receiver domain LA59_RS03485 PF04397 LytTr DNA-binding domain LA59_RS03490 PF06580 Histidine kinase LA59_RS03490 PF07694 5TMR of 5TMR-LYT LA59_RS03495 PF02554 Carbon starvation protein CstA LA59_RS03510 PF13006 Insertion element 4 transposase N-terminal LA59_RS03510 PF01609 Transposase DDE domain LA59_RS03515 PF01380 SIS domain LA59_RS03520 PF03702 Anhydro-N-acetylmuramic acid kinase LA59_RS03525 PF00933 Glycosyl hydrolase family 3 N terminal domain LA59_RS03530 PF00793 DAHP synthetase I family LA59_RS03535 PF02153 Prephenate dehydrogenase LA59_RS03535 PF01817 Chorismate mutase type II LA59_RS03540 PF04225 Opacity-associated protein A LysM-like domain LA59_RS03540 PF01551 Peptidase family M23 LA59_RS03545 PF07238 PilZ domain LA59_RS03550 PF00005 ABC transporter LA59_RS03550 PF12848 ABC transporter LA59_RS03555 PF01464 Transglycosylase SLT domain LA59_RS03555 PF14718 Soluble lytic murein transglycosylase L domain LA59_RS03560 PF01371 Trp repressor protein LA59_RS03565 PF01931 Protein of unknown function DUF84 LA59_RS03570 PF01817 Chorismate mutase type II LA59_RS03570 PF00800 Prephenate dehydratase LA59_RS03575 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LA59_RS03580 PF01464 Transglycosylase SLT domain LA59_RS03585 PF13525 Outer membrane lipoprotein LA59_RS03590 PF00849 RNA pseudouridylate synthase LA59_RS03590 PF01479 S4 domain LA59_RS03595 PF02578 Multi-copper polyphenol oxidoreductase laccase LA59_RS03600 PF00004 ATPase family associated with various cellular activities (AAA) LA59_RS03600 PF07724 AAA domain (Cdc48 subfamily) LA59_RS03600 PF17871 AAA lid domain LA59_RS03600 PF10431 C-terminal, D2-small domain, of ClpB protein LA59_RS03600 PF02861 Clp amino terminal domain, pathogenicity island component LA59_RS03645 PF03411 Penicillin-insensitive murein endopeptidase LA59_RS03655 PF00037 4Fe-4S binding domain LA59_RS03660 PF01136 Peptidase family U32 LA59_RS03660 PF16325 Peptidase family U32 C-terminal domain LA59_RS03665 PF04381 Putative exonuclease, RdgC LA59_RS03670 PF00486 Transcriptional regulatory protein, C terminal LA59_RS03670 PF00072 Response regulator receiver domain LA59_RS03675 PF11808 Phosphate regulon sensor protein PhoR LA59_RS03675 PF00989 PAS fold LA59_RS03675 PF00512 His Kinase A (phospho-acceptor) domain LA59_RS03675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_RS03680 PF12849 PBP superfamily domain LA59_RS03685 PF02541 Ppx/GppA phosphatase family LA59_RS03690 PF13090 Polyphosphate kinase C-terminal domain 2 LA59_RS03690 PF17941 Polyphosphate kinase C-terminal domain 1 LA59_RS03690 PF13089 Polyphosphate kinase N-terminal domain LA59_RS03690 PF02503 Polyphosphate kinase middle domain LA59_RS03695 PF00528 Binding-protein-dependent transport system inner membrane component LA59_RS03700 PF00528 Binding-protein-dependent transport system inner membrane component LA59_RS03705 PF00005 ABC transporter LA59_RS03710 PF01895 PhoU domain LA59_RS03725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_RS03725 PF03466 LysR substrate binding domain LA59_RS03730 PF03976 Polyphosphate kinase 2 (PPK2) LA59_RS03735 PF03932 CutC family LA59_RS03740 PF00578 AhpC/TSA family LA59_RS03740 PF10417 C-terminal domain of 1-Cys peroxiredoxin LA59_RS03745 PF03466 LysR substrate binding domain LA59_RS03745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_RS03750 PF01274 Malate synthase LA59_RS03755 PF00463 Isocitrate lyase family LA59_RS03760 PF00571 CBS domain LA59_RS03775 PF02547 Queuosine biosynthesis protein LA59_RS03780 PF01702 Queuine tRNA-ribosyltransferase LA59_RS03785 PF02699 Preprotein translocase subunit LA59_RS03790 PF13721 SecD export protein N-terminal TM region LA59_RS03790 PF02355 Protein export membrane protein LA59_RS03790 PF07549 SecD/SecF GG Motif LA59_RS03795 PF02355 Protein export membrane protein LA59_RS03795 PF07549 SecD/SecF GG Motif LA59_RS03810 PF00459 Inositol monophosphatase family LA59_RS03815 PF00588 SpoU rRNA Methylase family LA59_RS03820 PF02082 Transcriptional regulator LA59_RS03825 PF00266 Aminotransferase class-V LA59_RS03830 PF01592 NifU-like N terminal domain LA59_RS03835 PF01521 Iron-sulphur cluster biosynthesis LA59_RS03840 PF00226 DnaJ domain LA59_RS03840 PF07743 HSCB C-terminal oligomerisation domain LA59_RS03845 PF00012 Hsp70 protein LA59_RS03850 PF00111 2Fe-2S iron-sulfur cluster binding domain LA59_RS03855 PF04384 Iron-sulphur cluster assembly LA59_RS03860 PF12404 Peptidase LA59_RS03860 PF00883 Cytosol aminopeptidase family, catalytic domain LA59_RS03865 PF00334 Nucleoside diphosphate kinase LA59_RS03870 PF04055 Radical SAM superfamily LA59_RS03875 PF13464 Domain of unknown function (DUF4115) LA59_RS03880 PF04551 GcpE protein LA59_RS03885 PF03129 Anticodon binding domain LA59_RS03885 PF13393 Histidyl-tRNA synthetase LA59_RS03890 PF09976 Tetratricopeptide repeat-like domain LA59_RS03895 PF13360 PQQ-like domain LA59_RS03900 PF01926 50S ribosome-binding GTPase LA59_RS03900 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LA59_RS03910 PF13185 GAF domain LA59_RS03910 PF00990 Diguanylate cyclase, GGDEF domain LA59_RS03915 PF02601 Exonuclease VII, large subunit LA59_RS03915 PF13742 OB-fold nucleic acid binding domain LA59_RS03920 PF00478 IMP dehydrogenase / GMP reductase domain LA59_RS03920 PF00571 CBS domain LA59_RS03925 PF02540 NAD synthase LA59_RS03925 PF00117 Glutamine amidotransferase class-I LA59_RS03925 PF00958 GMP synthase C terminal domain LA59_RS03930 PF03553 Na+/H+ antiporter family LA59_RS03935 PF06483 Chitinase C LA59_RS03935 PF00704 Glycosyl hydrolases family 18 LA59_RS03940 PF01184 GPR1/FUN34/yaaH family LA59_RS03945 PF01235 Sodium:alanine symporter family LA59_RS03950 PF01266 FAD dependent oxidoreductase LA59_RS03955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_RS03955 PF03466 LysR substrate binding domain LA59_RS03970 PF01053 Cys/Met metabolism PLP-dependent enzyme LA59_RS03980 PF01521 Iron-sulphur cluster biosynthesis LA59_RS03985 PF01458 Uncharacterized protein family (UPF0051) LA59_RS03990 PF00005 ABC transporter LA59_RS03995 PF01458 Uncharacterized protein family (UPF0051) LA59_RS04000 PF00266 Aminotransferase class-V LA59_RS04005 PF02657 Fe-S metabolism associated domain LA59_RS04015 PF00202 Aminotransferase class-III LA59_RS04035 PF12805 FUSC-like inner membrane protein yccS LA59_RS04040 PF03466 LysR substrate binding domain LA59_RS04040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_RS04070 PF00589 Phage integrase family LA59_RS04070 PF13356 Arm DNA-binding domain LA59_RS04080 PF01668 SmpB protein LA59_RS04085 PF03364 Polyketide cyclase / dehydrase and lipid transport LA59_RS04090 PF03658 RnfH family Ubiquitin LA59_RS04095 PF04355 SmpA / OmlA family LA59_RS04100 PF02463 RecF/RecN/SMC N terminal domain LA59_RS04110 PF01513 ATP-NAD kinase LA59_RS04115 PF01025 GrpE LA59_RS04120 PF00375 Sodium:dicarboxylate symporter family LA59_RS04125 PF00012 Hsp70 protein LA59_RS04130 PF00226 DnaJ domain LA59_RS04130 PF01556 DnaJ C terminal domain LA59_RS04130 PF00684 DnaJ central domain LA59_RS04135 PF00114 Pilin (bacterial filament) LA59_RS04135 PF07963 Prokaryotic N-terminal methylation motif LA59_RS04140 PF00114 Pilin (bacterial filament) LA59_RS04140 PF07963 Prokaryotic N-terminal methylation motif LA59_RS04160 PF03806 AbgT putative transporter family LA59_RS04165 PF14437 MafB19-like deaminase LA59_RS04170 PF01464 Transglycosylase SLT domain LA59_RS04170 PF00497 Bacterial extracellular solute-binding proteins, family 3 LA59_RS04175 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LA59_RS04175 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LA59_RS04175 PF02769 AIR synthase related protein, C-terminal domain LA59_RS04190 PF07715 TonB-dependent Receptor Plug Domain LA59_RS04190 PF00593 TonB dependent receptor LA59_RS04205 PF07687 Peptidase dimerisation domain LA59_RS04205 PF01546 Peptidase family M20/M25/M40 LA59_RS04210 PF00860 Permease family LA59_RS04215 PF00156 Phosphoribosyl transferase domain LA59_RS04220 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) LA59_RS04225 PF07417 Sigma factor-binding transcriptional regulator Crl LA59_RS04230 PF01472 PUA domain LA59_RS04230 PF00696 Amino acid kinase family LA59_RS04235 PF00171 Aldehyde dehydrogenase family LA59_RS04240 PF03477 ATP cone domain LA59_RS04245 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LA59_RS04245 PF01872 RibD C-terminal domain LA59_RS04250 PF00677 Lumazine binding domain LA59_RS04255 PF00925 GTP cyclohydrolase II LA59_RS04255 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LA59_RS04260 PF00885 6,7-dimethyl-8-ribityllumazine synthase LA59_RS04265 PF01029 NusB family LA59_RS04270 PF00586 AIR synthase related protein, N-terminal domain LA59_RS04270 PF02769 AIR synthase related protein, C-terminal domain LA59_RS04275 PF04608 Phosphatidylglycerophosphatase A LA59_RS04280 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LA59_RS04280 PF02779 Transketolase, pyrimidine binding domain LA59_RS04280 PF02780 Transketolase, C-terminal domain LA59_RS04285 PF00348 Polyprenyl synthetase LA59_RS04290 PF02609 Exonuclease VII small subunit LA59_RS04295 PF01618 MotA/TolQ/ExbB proton channel family LA59_RS04300 PF00691 OmpA family LA59_RS04300 PF13677 Membrane MotB of proton-channel complex MotA/MotB LA59_RS04300 PF00691 OmpA family LA59_RS04300 PF13677 Membrane MotB of proton-channel complex MotA/MotB LA59_RS04305 PF02568 Thiamine biosynthesis protein (ThiI) LA59_RS04305 PF02926 THUMP domain LA59_RS04310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_RS04310 PF03466 LysR substrate binding domain LA59_RS04320 PF04241 Protein of unknown function (DUF423) LA59_RS04325 PF01728 FtsJ-like methyltransferase LA59_RS04325 PF18125 RlmM ferredoxin-like domain LA59_RS04330 PF01223 DNA/RNA non-specific endonuclease LA59_RS04335 PF01367 5'-3' exonuclease, C-terminal SAM fold LA59_RS04335 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LA59_RS04340 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases LA59_RS04340 PF03641 Possible lysine decarboxylase LA59_RS04340 PF11892 Domain of unknown function (DUF3412) LA59_RS04345 PF00990 Diguanylate cyclase, GGDEF domain LA59_RS04355 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LA59_RS04355 PF14489 QueF-like protein LA59_RS04360 PF07348 Syd protein (SUKH-2) LA59_RS04365 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) LA59_RS04370 PF02872 5'-nucleotidase, C-terminal domain LA59_RS04370 PF00149 Calcineurin-like phosphoesterase LA59_RS04380 PF03180 NLPA lipoprotein LA59_RS04385 PF00528 Binding-protein-dependent transport system inner membrane component LA59_RS04390 PF00005 ABC transporter LA59_RS04390 PF09383 NIL domain LA59_RS04400 PF00356 Bacterial regulatory proteins, lacI family LA59_RS04405 PF02378 Phosphotransferase system, EIIC LA59_RS04405 PF00367 phosphotransferase system, EIIB LA59_RS04410 PF00128 Alpha amylase, catalytic domain LA59_RS04410 PF16657 Maltogenic Amylase, C-terminal domain LA59_RS04425 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LA59_RS04425 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LA59_RS04430 PF00464 Serine hydroxymethyltransferase LA59_RS04435 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LA59_RS04435 PF04055 Radical SAM superfamily LA59_RS04440 PF03099 Biotin/lipoate A/B protein ligase family LA59_RS04445 PF04359 Protein of unknown function (DUF493) LA59_RS04450 PF07943 Penicillin-binding protein 5, C-terminal domain LA59_RS04450 PF00768 D-alanyl-D-alanine carboxypeptidase LA59_RS04455 PF03330 Lytic transglycolase LA59_RS04455 PF05036 Sporulation related domain LA59_RS04460 PF01098 Cell cycle protein LA59_RS04465 PF03717 Penicillin-binding Protein dimerisation domain LA59_RS04465 PF00905 Penicillin binding protein transpeptidase domain LA59_RS04470 PF02590 Predicted SPOUT methyltransferase LA59_RS04480 PF06144 DNA polymerase III, delta subunit LA59_RS04480 PF14840 Processivity clamp loader gamma complex DNA pol III C-term LA59_RS04485 PF04390 Lipopolysaccharide-assembly LA59_RS04490 PF13603 Leucyl-tRNA synthetase, Domain 2 LA59_RS04490 PF08264 Anticodon-binding domain of tRNA LA59_RS04490 PF00133 tRNA synthetases class I (I, L, M and V) LA59_RS04495 PF07295 Zinc-ribbon containing domain LA59_RS04500 PF00795 Carbon-nitrogen hydrolase LA59_RS04505 PF00571 CBS domain LA59_RS04505 PF03471 Transporter associated domain LA59_RS04510 PF02130 Uncharacterized protein family UPF0054 LA59_RS04515 PF02562 PhoH-like protein LA59_RS04520 PF01938 TRAM domain LA59_RS04520 PF04055 Radical SAM superfamily LA59_RS04520 PF00919 Uncharacterized protein family UPF0004 LA59_RS04525 PF01494 FAD binding domain LA59_RS04635 PF01926 50S ribosome-binding GTPase LA59_RS04635 PF06071 Protein of unknown function (DUF933) LA59_RS04640 PF01195 Peptidyl-tRNA hydrolase LA59_RS04645 PF14572 Phosphoribosyl synthetase-associated domain LA59_RS04645 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LA59_RS04650 PF00288 GHMP kinases N terminal domain LA59_RS04650 PF08544 GHMP kinases C terminal LA59_RS04655 PF03550 Outer membrane lipoprotein LolB LA59_RS04660 PF01488 Shikimate / quinate 5-dehydrogenase LA59_RS04660 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LA59_RS04660 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LA59_RS04665 PF03462 PCRF domain LA59_RS04665 PF00472 RF-1 domain LA59_RS04670 PF17827 PrmC N-terminal domain LA59_RS04670 PF13847 Methyltransferase domain LA59_RS04675 PF04247 Invasion gene expression up-regulator, SirB LA59_RS04680 PF13369 Transglutaminase-like superfamily LA59_RS04685 PF00793 DAHP synthetase I family LA59_RS04690 PF02872 5'-nucleotidase, C-terminal domain LA59_RS04690 PF00149 Calcineurin-like phosphoesterase LA59_RS04695 PF04073 Aminoacyl-tRNA editing domain LA59_RS04700 PF00849 RNA pseudouridylate synthase LA59_RS04700 PF01479 S4 domain LA59_RS04705 PF01713 Smr domain LA59_RS04735 PF00728 Glycosyl hydrolase family 20, catalytic domain LA59_RS04735 PF03173 Putative carbohydrate binding domain LA59_RS04735 PF02838 Glycosyl hydrolase family 20, domain 2 LA59_RS04735 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain LA59_RS04750 PF00403 Heavy-metal-associated domain LA59_RS04755 PF13609 Gram-negative porin LA59_RS04760 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) LA59_RS04765 PF00749 tRNA synthetases class I (E and Q), catalytic domain LA59_RS04770 PF01389 OmpA-like transmembrane domain LA59_RS04770 PF00691 OmpA family LA59_RS04815 PF00072 Response regulator receiver domain LA59_RS04815 PF01584 CheW-like domain LA59_RS04820 PF01739 CheR methyltransferase, SAM binding domain LA59_RS04820 PF03705 CheR methyltransferase, all-alpha domain LA59_RS04825 PF00460 Flagella basal body rod protein LA59_RS04830 PF00460 Flagella basal body rod protein LA59_RS04830 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LA59_RS04835 PF13860 FlgD Ig-like domain LA59_RS04835 PF13861 FlgD Tudor-like domain LA59_RS04835 PF03963 Flagellar hook capping protein - N-terminal region LA59_RS04840 PF07559 Flagellar basal body protein FlaE LA59_RS04840 PF00460 Flagella basal body rod protein LA59_RS04840 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LA59_RS04845 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LA59_RS04845 PF00460 Flagella basal body rod protein LA59_RS04850 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LA59_RS04850 PF00460 Flagella basal body rod protein LA59_RS04855 PF02107 Flagellar L-ring protein LA59_RS04860 PF02119 Flagellar P-ring protein LA59_RS04865 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LA59_RS04865 PF10135 Rod binding protein LA59_RS04870 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LA59_RS04870 PF07196 Flagellin hook IN motif LA59_RS04880 PF00669 Bacterial flagellin N-terminal helical region LA59_RS04880 PF07196 Flagellin hook IN motif LA59_RS04880 PF00700 Bacterial flagellin C-terminal helical region LA59_RS04885 PF00669 Bacterial flagellin N-terminal helical region LA59_RS04885 PF07196 Flagellin hook IN motif LA59_RS04885 PF00700 Bacterial flagellin C-terminal helical region LA59_RS04890 PF07196 Flagellin hook IN motif LA59_RS04890 PF00700 Bacterial flagellin C-terminal helical region LA59_RS04890 PF00669 Bacterial flagellin N-terminal helical region LA59_RS04895 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LA59_RS04900 PF02896 PEP-utilising enzyme, TIM barrel domain LA59_RS04900 PF05524 PEP-utilising enzyme, N-terminal LA59_RS04900 PF00391 PEP-utilising enzyme, mobile domain LA59_RS04905 PF00381 PTS HPr component phosphorylation site LA59_RS04910 PF00291 Pyridoxal-phosphate dependent enzyme LA59_RS04920 PF04354 ZipA, C-terminal FtsZ-binding domain LA59_RS04925 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LA59_RS04925 PF00533 BRCA1 C Terminus (BRCT) domain LA59_RS04925 PF01653 NAD-dependent DNA ligase adenylation domain LA59_RS04925 PF03120 NAD-dependent DNA ligase OB-fold domain LA59_RS04925 PF12826 Helix-hairpin-helix motif LA59_RS04930 PF03573 outer membrane porin, OprD family LA59_RS04945 PF01145 SPFH domain / Band 7 family LA59_RS04945 PF16200 C-terminal region of band_7 LA59_RS04950 PF00085 Thioredoxin LA59_RS04955 PF00106 short chain dehydrogenase LA59_RS04960 PF01370 NAD dependent epimerase/dehydratase family LA59_RS04960 PF08338 Domain of unknown function (DUF1731) LA59_RS04965 PF07556 Protein of unknown function (DUF1538) LA59_RS04970 PF07556 Protein of unknown function (DUF1538) LA59_RS04990 PF12850 Calcineurin-like phosphoesterase superfamily domain LA59_RS05005 PF17323 Trans-membrane regulatory protein ToxS LA59_RS05010 PF00486 Transcriptional regulatory protein, C terminal LA59_RS05015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_RS05015 PF00183 Hsp90 protein LA59_RS05020 PF05191 Adenylate kinase, active site lid LA59_RS05025 PF00762 Ferrochelatase LA59_RS05030 PF00854 POT family LA59_RS05035 PF02357 Transcription termination factor nusG LA59_RS05040 PF13537 Glutamine amidotransferase domain LA59_RS05040 PF00733 Asparagine synthase LA59_RS05045 PF02254 TrkA-N domain LA59_RS05045 PF00999 Sodium/hydrogen exchanger family LA59_RS05050 PF00480 ROK family LA59_RS05050 PF01047 MarR family LA59_RS05055 PF01979 Amidohydrolase family LA59_RS05060 PF00367 phosphotransferase system, EIIB LA59_RS05060 PF02378 Phosphotransferase system, EIIC LA59_RS05060 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LA59_RS05065 PF00749 tRNA synthetases class I (E and Q), catalytic domain LA59_RS05065 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LA59_RS05070 PF07963 Prokaryotic N-terminal methylation motif LA59_RS05075 PF01475 Ferric uptake regulator family LA59_RS05085 PF00258 Flavodoxin LA59_RS05095 PF00561 alpha/beta hydrolase fold LA59_RS05100 PF03925 SeqA protein C-terminal domain LA59_RS05100 PF17206 SeqA protein N-terminal domain LA59_RS05105 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LA59_RS05105 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LA59_RS05105 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LA59_RS05105 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LA59_RS05120 PF01784 NIF3 (NGG1p interacting factor 3) LA59_RS05125 PF00285 Citrate synthase, C-terminal domain LA59_RS05130 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LA59_RS05135 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LA59_RS05140 PF00890 FAD binding domain LA59_RS05140 PF02910 Fumarate reductase flavoprotein C-term LA59_RS05145 PF13085 2Fe-2S iron-sulfur cluster binding domain LA59_RS05150 PF16078 2-oxoglutarate dehydrogenase N-terminus LA59_RS05150 PF00676 Dehydrogenase E1 component LA59_RS05150 PF02779 Transketolase, pyrimidine binding domain LA59_RS05150 PF16870 2-oxoglutarate dehydrogenase C-terminal LA59_RS05155 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LA59_RS05155 PF00364 Biotin-requiring enzyme LA59_RS05155 PF02817 e3 binding domain LA59_RS05160 PF00549 CoA-ligase LA59_RS05160 PF08442 ATP-grasp domain LA59_RS05165 PF02629 CoA binding domain LA59_RS05165 PF00549 CoA-ligase LA59_RS05170 PF00950 ABC 3 transport family LA59_RS05175 PF00005 ABC transporter LA59_RS05180 PF01297 Zinc-uptake complex component A periplasmic LA59_RS05185 PF02311 AraC-like ligand binding domain LA59_RS05185 PF12833 Helix-turn-helix domain LA59_RS05190 PF04023 FeoA domain LA59_RS05195 PF02421 Ferrous iron transport protein B LA59_RS05195 PF07670 Nucleoside recognition LA59_RS05195 PF07664 Ferrous iron transport protein B C terminus LA59_RS05195 PF17910 FeoB cytosolic helical domain LA59_RS05215 PF03485 Arginyl tRNA synthetase N terminal domain LA59_RS05215 PF05746 DALR anticodon binding domain LA59_RS05215 PF00750 tRNA synthetases class I (R) LA59_RS05220 PF06185 YecM protein LA59_RS05225 PF01842 ACT domain LA59_RS05225 PF00551 Formyl transferase LA59_RS05230 PF13307 Helicase C-terminal domain LA59_RS05230 PF04851 Type III restriction enzyme, res subunit LA59_RS05235 PF00814 Glycoprotease family LA59_RS05245 PF03843 Outer membrane lipoprotein Slp family LA59_RS05250 PF12697 Alpha/beta hydrolase family LA59_RS05255 PF00501 AMP-binding enzyme LA59_RS05255 PF13193 AMP-binding enzyme C-terminal domain LA59_RS05260 PF00570 HRDC domain LA59_RS05260 PF01612 3'-5' exonuclease LA59_RS05265 PF03776 Septum formation topological specificity factor MinE LA59_RS05270 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LA59_RS05275 PF05209 Septum formation inhibitor MinC, N-terminal domain LA59_RS05275 PF03775 Septum formation inhibitor MinC, C-terminal domain LA59_RS05280 PF05166 YcgL domain LA59_RS05285 PF13406 Transglycosylase SLT domain LA59_RS05290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_RS05290 PF03466 LysR substrate binding domain LA59_RS05295 PF01773 Na+ dependent nucleoside transporter N-terminus LA59_RS05295 PF07662 Na+ dependent nucleoside transporter C-terminus LA59_RS05295 PF07670 Nucleoside recognition LA59_RS05300 PF00145 C-5 cytosine-specific DNA methylase LA59_RS05310 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LA59_RS05310 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LA59_RS05325 PF02801 Beta-ketoacyl synthase, C-terminal domain LA59_RS05325 PF00109 Beta-ketoacyl synthase, N-terminal domain LA59_RS05335 PF07977 FabA-like domain LA59_RS05340 PF02801 Beta-ketoacyl synthase, C-terminal domain LA59_RS05340 PF00109 Beta-ketoacyl synthase, N-terminal domain LA59_RS05365 PF00221 Aromatic amino acid lyase LA59_RS05370 PF00535 Glycosyl transferase family 2 LA59_RS05375 PF07977 FabA-like domain LA59_RS05380 PF13193 AMP-binding enzyme C-terminal domain LA59_RS05380 PF00501 AMP-binding enzyme LA59_RS05390 PF00550 Phosphopantetheine attachment site LA59_RS05395 PF00550 Phosphopantetheine attachment site LA59_RS05420 PF04820 Tryptophan halogenase LA59_RS05425 PF01209 ubiE/COQ5 methyltransferase family LA59_RS05430 PF13391 HNH endonuclease LA59_RS05450 PF00425 chorismate binding enzyme LA59_RS05455 PF13193 AMP-binding enzyme C-terminal domain LA59_RS05455 PF00501 AMP-binding enzyme LA59_RS05460 PF00857 Isochorismatase family LA59_RS05460 PF00550 Phosphopantetheine attachment site LA59_RS05465 PF00550 Phosphopantetheine attachment site LA59_RS05465 PF13193 AMP-binding enzyme C-terminal domain LA59_RS05465 PF00501 AMP-binding enzyme LA59_RS05465 PF00975 Thioesterase domain LA59_RS05465 PF00668 Condensation domain LA59_RS05465 PF00501 AMP-binding enzyme LA59_RS05465 PF00975 Thioesterase domain LA59_RS05465 PF00550 Phosphopantetheine attachment site LA59_RS05465 PF00668 Condensation domain LA59_RS05465 PF13193 AMP-binding enzyme C-terminal domain LA59_RS05480 PF07715 TonB-dependent Receptor Plug Domain LA59_RS05480 PF00593 TonB dependent receptor LA59_RS05485 PF03471 Transporter associated domain LA59_RS05485 PF01595 Cyclin M transmembrane N-terminal domain LA59_RS05485 PF00571 CBS domain LA59_RS05490 PF00270 DEAD/DEAH box helicase LA59_RS05490 PF00271 Helicase conserved C-terminal domain LA59_RS05495 PF02080 TrkA-C domain LA59_RS05495 PF02254 TrkA-N domain LA59_RS05500 PF02386 Cation transport protein LA59_RS05510 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LA59_RS05515 PF03480 Bacterial extracellular solute-binding protein, family 7 LA59_RS05520 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component LA59_RS05525 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LA59_RS05535 PF00158 Sigma-54 interaction domain LA59_RS05535 PF02954 Bacterial regulatory protein, Fis family LA59_RS05535 PF00072 Response regulator receiver domain LA59_RS05540 PF02743 Cache domain LA59_RS05540 PF00512 His Kinase A (phospho-acceptor) domain LA59_RS05540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_RS05545 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LA59_RS05545 PF05698 Bacterial trigger factor protein (TF) C-terminus LA59_RS05545 PF05697 Bacterial trigger factor protein (TF) LA59_RS05550 PF00574 Clp protease LA59_RS05555 PF07724 AAA domain (Cdc48 subfamily) LA59_RS05555 PF10431 C-terminal, D2-small domain, of ClpB protein LA59_RS05555 PF06689 ClpX C4-type zinc finger LA59_RS05560 PF05362 Lon protease (S16) C-terminal proteolytic domain LA59_RS05560 PF02190 ATP-dependent protease La (LON) substrate-binding domain LA59_RS05560 PF00004 ATPase family associated with various cellular activities (AAA) LA59_RS05565 PF00216 Bacterial DNA-binding protein LA59_RS05570 PF13145 PPIC-type PPIASE domain LA59_RS05590 PF01966 HD domain LA59_RS05590 PF13286 Phosphohydrolase-associated domain LA59_RS05685 PF00155 Aminotransferase class I and II LA59_RS05690 PF00425 chorismate binding enzyme LA59_RS05695 PF16582 Middle domain of thiamine pyrophosphate LA59_RS05695 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LA59_RS05695 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LA59_RS05700 PF12697 Alpha/beta hydrolase family LA59_RS05705 PF00378 Enoyl-CoA hydratase/isomerase LA59_RS05710 PF13378 Enolase C-terminal domain-like LA59_RS05715 PF00501 AMP-binding enzyme LA59_RS05715 PF13193 AMP-binding enzyme C-terminal domain LA59_RS05720 PF02378 Phosphotransferase system, EIIC LA59_RS05720 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LA59_RS05720 PF00367 phosphotransferase system, EIIB LA59_RS05725 PF03466 LysR substrate binding domain LA59_RS05725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_RS05735 PF03601 Conserved hypothetical protein 698 LA59_RS05740 PF07690 Major Facilitator Superfamily LA59_RS05785 PF13533 Biotin-lipoyl like LA59_RS05790 PF00873 AcrB/AcrD/AcrF family LA59_RS05810 PF00291 Pyridoxal-phosphate dependent enzyme LA59_RS05815 PF01037 Lrp/AsnC ligand binding domain LA59_RS05815 PF13404 AsnC-type helix-turn-helix domain LA59_RS05830 PF09619 Type III secretion system lipoprotein chaperone (YscW) LA59_RS05835 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LA59_RS05845 PF00990 Diguanylate cyclase, GGDEF domain LA59_RS05855 PF00690 Cation transporter/ATPase, N-terminus LA59_RS05855 PF00689 Cation transporting ATPase, C-terminus LA59_RS05860 PF00588 SpoU rRNA Methylase family LA59_RS05860 PF08032 RNA 2'-O ribose methyltransferase substrate binding LA59_RS05865 PF11953 Domain of unknown function (DUF3470) LA59_RS05865 PF00037 4Fe-4S binding domain LA59_RS05875 PF00571 CBS domain LA59_RS05875 PF01743 Poly A polymerase head domain LA59_RS05880 PF01554 MatE LA59_RS05885 PF00403 Heavy-metal-associated domain LA59_RS05890 PF01048 Phosphorylase superfamily LA59_RS05900 PF00672 HAMP domain LA59_RS05900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_RS05905 PF01230 HIT domain LA59_RS05920 PF13036 Peptidoglycan-synthase activator LpoB LA59_RS05920 PF08139 Prokaryotic membrane lipoprotein lipid attachment site LA59_RS05930 PF05728 Uncharacterised protein family (UPF0227) LA59_RS05935 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA59_RS05950 PF00271 Helicase conserved C-terminal domain LA59_RS05950 PF17757 UvrB interaction domain LA59_RS05950 PF02559 CarD-like/TRCF domain LA59_RS05950 PF03461 TRCF domain LA59_RS05950 PF00270 DEAD/DEAH box helicase LA59_RS05960 PF12704 MacB-like periplasmic core domain LA59_RS05960 PF02687 FtsX-like permease family LA59_RS05965 PF00005 ABC transporter LA59_RS05970 PF12704 MacB-like periplasmic core domain LA59_RS05970 PF02687 FtsX-like permease family LA59_RS05980 PF03772 Competence protein LA59_RS05980 PF00753 Metallo-beta-lactamase superfamily LA59_RS05985 PF00005 ABC transporter LA59_RS05985 PF00664 ABC transporter transmembrane region LA59_RS05990 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LA59_RS05995 PF03966 Trm112p-like protein LA59_RS06000 PF02348 Cytidylyltransferase LA59_RS06005 PF04293 SpoVR like protein LA59_RS06010 PF04285 Protein of unknown function (DUF444) LA59_RS06015 PF06798 PrkA serine protein kinase C-terminal domain LA59_RS06015 PF08298 PrkA AAA domain LA59_RS06020 PF03887 YfbU domain LA59_RS06030 PF04055 Radical SAM superfamily LA59_RS06040 PF01228 Glycine radical LA59_RS06040 PF02901 Pyruvate formate lyase-like LA59_RS06055 PF00005 ABC transporter LA59_RS06060 PF00497 Bacterial extracellular solute-binding proteins, family 3 LA59_RS06065 PF00528 Binding-protein-dependent transport system inner membrane component LA59_RS06070 PF00528 Binding-protein-dependent transport system inner membrane component LA59_RS06075 PF03372 Endonuclease/Exonuclease/phosphatase family LA59_RS06080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_RS06080 PF00672 HAMP domain LA59_RS06085 PF10689 Protein of unknown function (DUF2496) LA59_RS06095 PF01925 Sulfite exporter TauE/SafE LA59_RS06100 PF06733 DEAD_2 LA59_RS06100 PF13307 Helicase C-terminal domain LA59_RS06110 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) LA59_RS06115 PF00849 RNA pseudouridylate synthase LA59_RS06120 PF03971 Monomeric isocitrate dehydrogenase LA59_RS06125 PF00313 'Cold-shock' DNA-binding domain LA59_RS06130 PF02617 ATP-dependent Clp protease adaptor protein ClpS LA59_RS06135 PF10431 C-terminal, D2-small domain, of ClpB protein LA59_RS06135 PF02861 Clp amino terminal domain, pathogenicity island component LA59_RS06135 PF17871 AAA lid domain LA59_RS06135 PF07724 AAA domain (Cdc48 subfamily) LA59_RS06135 PF00004 ATPase family associated with various cellular activities (AAA) LA59_RS06140 PF01176 Translation initiation factor 1A / IF-1 LA59_RS06145 PF04376 Arginine-tRNA-protein transferase, N terminus LA59_RS06145 PF04377 Arginine-tRNA-protein transferase, C terminus LA59_RS06150 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LA59_RS06160 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LA59_RS06165 PF10692 Protein of unknown function (DUF2498) LA59_RS06170 PF01131 DNA topoisomerase LA59_RS06170 PF08272 Topoisomerase I zinc-ribbon-like LA59_RS06170 PF01396 Topoisomerase DNA binding C4 zinc finger LA59_RS06170 PF01751 Toprim domain LA59_RS06175 PF00483 Nucleotidyl transferase LA59_RS06180 PF08323 Starch synthase catalytic domain LA59_RS06180 PF00534 Glycosyl transferases group 1 LA59_RS06200 PF04993 TfoX N-terminal domain LA59_RS06200 PF04994 TfoX C-terminal domain LA59_RS06205 PF00356 Bacterial regulatory proteins, lacI family LA59_RS06210 PF02613 Nitrate reductase delta subunit LA59_RS06215 PF00486 Transcriptional regulatory protein, C terminal LA59_RS06215 PF00072 Response regulator receiver domain LA59_RS06220 PF02698 DUF218 domain LA59_RS06225 PF13847 Methyltransferase domain LA59_RS06230 PF17192 MukF middle domain LA59_RS06230 PF17193 MukF C-terminal domain LA59_RS06230 PF03882 MukF winged-helix domain LA59_RS06235 PF04288 MukE-like family LA59_RS06240 PF04310 MukB N-terminal LA59_RS06240 PF16330 MukB hinge domain LA59_RS06245 PF18030 RimK PreATP-grasp domain LA59_RS06245 PF08443 RimK-like ATP-grasp domain LA59_RS06255 PF08443 RimK-like ATP-grasp domain LA59_RS06255 PF18030 RimK PreATP-grasp domain LA59_RS06260 PF08003 Protein of unknown function (DUF1698) LA59_RS06265 PF13649 Methyltransferase domain LA59_RS06270 PF01904 Protein of unknown function DUF72 LA59_RS06275 PF02938 GAD domain LA59_RS06275 PF01336 OB-fold nucleic acid binding domain LA59_RS06275 PF00152 tRNA synthetases class II (D, K and N) LA59_RS06280 PF02075 Crossover junction endodeoxyribonuclease RuvC LA59_RS06285 PF17200 Single Cache domain 2 LA59_RS06285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_RS06285 PF00672 HAMP domain LA59_RS06290 PF07499 RuvA, C-terminal domain LA59_RS06290 PF01330 RuvA N terminal domain LA59_RS06295 PF05491 RuvB C-terminal winged helix domain LA59_RS06295 PF17864 RuvB AAA lid domain LA59_RS06295 PF05496 Holliday junction DNA helicase RuvB P-loop domain LA59_RS06300 PF01654 Cytochrome bd terminal oxidase subunit I LA59_RS06305 PF02322 Cytochrome bd terminal oxidase subunit II LA59_RS06310 PF08173 Membrane bound YbgT-like protein LA59_RS06320 PF03061 Thioesterase superfamily LA59_RS06325 PF01618 MotA/TolQ/ExbB proton channel family LA59_RS06330 PF02472 Biopolymer transport protein ExbD/TolR LA59_RS06340 PF04052 TolB amino-terminal domain LA59_RS06340 PF07676 WD40-like Beta Propeller Repeat LA59_RS06345 PF00691 OmpA family LA59_RS06350 PF13174 Tetratricopeptide repeat LA59_RS06350 PF16331 TolA binding protein trimerisation LA59_RS06355 PF00571 CBS domain LA59_RS06355 PF01380 SIS domain LA59_RS06360 PF03928 Haem-degrading LA59_RS06365 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LA59_RS06365 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LA59_RS06370 PF00381 PTS HPr component phosphorylation site LA59_RS06370 PF02896 PEP-utilising enzyme, TIM barrel domain LA59_RS06370 PF00391 PEP-utilising enzyme, mobile domain LA59_RS06370 PF05524 PEP-utilising enzyme, N-terminal LA59_RS06370 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LA59_RS06380 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LA59_RS06385 PF02901 Pyruvate formate lyase-like LA59_RS06385 PF01228 Glycine radical LA59_RS06390 PF04055 Radical SAM superfamily LA59_RS06395 PF01370 NAD dependent epimerase/dehydratase family LA59_RS06400 PF00923 Transaldolase/Fructose-6-phosphate aldolase LA59_RS06405 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LA59_RS06410 PF12833 Helix-turn-helix domain LA59_RS06415 PF00465 Iron-containing alcohol dehydrogenase LA59_RS06420 PF13419 Haloacid dehalogenase-like hydrolase LA59_RS06425 PF01238 Phosphomannose isomerase type I LA59_RS06430 PF02445 Quinolinate synthetase A protein LA59_RS06440 PF03994 Domain of Unknown Function (DUF350) LA59_RS06450 PF03738 Glutathionylspermidine synthase preATP-grasp LA59_RS06460 PF00512 His Kinase A (phospho-acceptor) domain LA59_RS06460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_RS06460 PF09308 LuxQ, periplasmic LA59_RS06460 PF00072 Response regulator receiver domain LA59_RS06465 PF06610 L-alanine exporter LA59_RS06490 PF12833 Helix-turn-helix domain LA59_RS06505 PF03958 Bacterial type II/III secretion system short domain LA59_RS06505 PF00263 Bacterial type II and III secretion system protein LA59_RS06520 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF LA59_RS06535 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI LA59_RS06540 PF01514 Secretory protein of YscJ/FliF family LA59_RS06550 PF02108 Flagellar assembly protein FliH LA59_RS06585 PF01312 FlhB HrpN YscU SpaS Family LA59_RS06590 PF01311 Bacterial export proteins, family 1 LA59_RS06595 PF01313 Bacterial export proteins, family 3 LA59_RS06600 PF00813 FliP family LA59_RS06605 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LA59_RS06620 PF02874 ATP synthase alpha/beta family, beta-barrel domain LA59_RS06620 PF18269 T3SS EscN ATPase C-terminal domain LA59_RS06620 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LA59_RS06625 PF07201 HrpJ-like domain LA59_RS06630 PF09059 TyeA LA59_RS06650 PF00771 FHIPEP family LA59_RS06655 PF09621 Type III secretion system regulator (LcrR) LA59_RS06670 PF07720 Tetratricopeptide repeat LA59_RS06680 PF05844 YopD protein LA59_RS06685 PF13411 MerR HTH family regulatory protein LA59_RS06690 PF02627 Carboxymuconolactone decarboxylase family LA59_RS06695 PF01609 Transposase DDE domain LA59_RS06695 PF13006 Insertion element 4 transposase N-terminal LA59_RS06700 PF11471 Maltoporin periplasmic N-terminal extension LA59_RS06700 PF02264 LamB porin LA59_RS06705 PF00356 Bacterial regulatory proteins, lacI family LA59_RS06710 PF02378 Phosphotransferase system, EIIC LA59_RS06710 PF00367 phosphotransferase system, EIIB LA59_RS06715 PF00294 pfkB family carbohydrate kinase LA59_RS06720 PF00251 Glycosyl hydrolases family 32 N-terminal domain LA59_RS06720 PF08244 Glycosyl hydrolases family 32 C terminal LA59_RS06725 PF08274 PhnA Zinc-Ribbon LA59_RS06725 PF03831 PhnA domain LA59_RS06735 PF07715 TonB-dependent Receptor Plug Domain LA59_RS06735 PF00593 TonB dependent receptor LA59_RS06765 PF01554 MatE LA59_RS06770 PF00005 ABC transporter LA59_RS06770 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LA59_RS06775 PF00005 ABC transporter LA59_RS06775 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LA59_RS06780 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LA59_RS06785 PF00528 Binding-protein-dependent transport system inner membrane component LA59_RS06795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_RS06795 PF02743 Cache domain LA59_RS06795 PF00672 HAMP domain LA59_RS06800 PF03466 LysR substrate binding domain LA59_RS06800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_RS06815 PF00529 HlyD membrane-fusion protein of T1SS LA59_RS06815 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LA59_RS06820 PF00873 AcrB/AcrD/AcrF family LA59_RS06830 PF00392 Bacterial regulatory proteins, gntR family LA59_RS06830 PF07729 FCD domain LA59_RS06835 PF01546 Peptidase family M20/M25/M40 LA59_RS06835 PF07687 Peptidase dimerisation domain LA59_RS06840 PF03606 C4-dicarboxylate anaerobic carrier LA59_RS06850 PF01557 Fumarylacetoacetate (FAA) hydrolase family LA59_RS06865 PF00474 Sodium:solute symporter family LA59_RS06880 PF07733 Bacterial DNA polymerase III alpha NTPase domain LA59_RS06880 PF02811 PHP domain LA59_RS06880 PF14579 Helix-hairpin-helix motif LA59_RS06880 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LA59_RS06880 PF00929 Exonuclease LA59_RS06885 PF00571 CBS domain LA59_RS06890 PF07729 FCD domain LA59_RS06890 PF00392 Bacterial regulatory proteins, gntR family LA59_RS06900 PF00392 Bacterial regulatory proteins, gntR family LA59_RS06900 PF07729 FCD domain LA59_RS06910 PF07940 Heparinase II/III-like protein LA59_RS06910 PF05426 Alginate lyase LA59_RS06915 PF05426 Alginate lyase LA59_RS06915 PF07940 Heparinase II/III-like protein LA59_RS06920 PF07883 Cupin domain LA59_RS06925 PF00294 pfkB family carbohydrate kinase LA59_RS06930 PF01081 KDPG and KHG aldolase LA59_RS06935 PF00474 Sodium:solute symporter family LA59_RS06945 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LA59_RS06945 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LA59_RS06950 PF00141 Peroxidase LA59_RS06960 PF00579 tRNA synthetases class I (W and Y) LA59_RS06975 PF03372 Endonuclease/Exonuclease/phosphatase family LA59_RS06980 PF02743 Cache domain LA59_RS06980 PF00672 HAMP domain LA59_RS06980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_RS06985 PF04151 Bacterial pre-peptidase C-terminal domain LA59_RS06985 PF08453 Peptidase family M9 N-terminal LA59_RS06985 PF01752 Collagenase LA59_RS07000 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) LA59_RS07010 PF03466 LysR substrate binding domain LA59_RS07010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_RS07020 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LA59_RS07020 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LA59_RS07025 PF01037 Lrp/AsnC ligand binding domain LA59_RS07030 PF17854 FtsK alpha domain LA59_RS07030 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LA59_RS07030 PF01580 FtsK/SpoIIIE family LA59_RS07030 PF09397 Ftsk gamma domain LA59_RS07035 PF03548 Outer membrane lipoprotein carrier protein LolA LA59_RS07040 PF00004 ATPase family associated with various cellular activities (AAA) LA59_RS07040 PF16193 AAA C-terminal domain LA59_RS07040 PF12002 MgsA AAA+ ATPase C terminal LA59_RS07045 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LA59_RS07045 PF02403 Seryl-tRNA synthetase N-terminal domain LA59_RS07060 PF01258 Prokaryotic dksA/traR C4-type zinc finger LA59_RS07065 PF00202 Aminotransferase class-III LA59_RS07070 PF04055 Radical SAM superfamily LA59_RS07070 PF06968 Biotin and Thiamin Synthesis associated domain LA59_RS07075 PF00155 Aminotransferase class I and II LA59_RS07080 PF08241 Methyltransferase domain LA59_RS07090 PF01435 Peptidase family M48 LA59_RS07100 PF00106 short chain dehydrogenase LA59_RS07125 PF16036 Chalcone isomerase-like LA59_RS07135 PF00206 Lyase LA59_RS07135 PF08328 Adenylosuccinate lyase C-terminal LA59_RS07140 PF04356 Protein of unknown function (DUF489) LA59_RS07155 PF00294 pfkB family carbohydrate kinase LA59_RS07160 PF00816 H-NS histone family LA59_RS07165 PF03553 Na+/H+ antiporter family LA59_RS07170 PF08029 HisG, C-terminal domain LA59_RS07170 PF01634 ATP phosphoribosyltransferase LA59_RS07175 PF00815 Histidinol dehydrogenase LA59_RS07180 PF00155 Aminotransferase class I and II LA59_RS07185 PF08645 Polynucleotide kinase 3 phosphatase LA59_RS07185 PF00475 Imidazoleglycerol-phosphate dehydratase LA59_RS07190 PF00117 Glutamine amidotransferase class-I LA59_RS07195 PF00977 Histidine biosynthesis protein LA59_RS07200 PF00977 Histidine biosynthesis protein LA59_RS07205 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LA59_RS07205 PF01502 Phosphoribosyl-AMP cyclohydrolase LA59_RS07210 PF02810 SEC-C motif LA59_RS07215 PF00563 EAL domain LA59_RS07215 PF08668 HDOD domain LA59_RS07220 PF00149 Calcineurin-like phosphoesterase LA59_RS07225 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LA59_RS07230 PF09190 DALR domain LA59_RS07230 PF01406 tRNA synthetases class I (C) catalytic domain LA59_RS07235 PF00265 Thymidine kinase LA59_RS07240 PF02698 DUF218 domain LA59_RS07265 PF01226 Formate/nitrite transporter LA59_RS07270 PF03649 Uncharacterised protein family (UPF0014) LA59_RS07275 PF06796 Periplasmic nitrate reductase protein NapE LA59_RS07280 PF03264 NapC/NirT cytochrome c family, N-terminal region LA59_RS07285 PF18364 Molybdopterin oxidoreductase N-terminal domain LA59_RS07285 PF00384 Molybdopterin oxidoreductase LA59_RS07285 PF01568 Molydopterin dinucleotide binding domain LA59_RS07290 PF16874 Glycosyl hydrolase family 36 C-terminal domain LA59_RS07290 PF16875 Glycosyl hydrolase family 36 N-terminal domain LA59_RS07295 PF01297 Zinc-uptake complex component A periplasmic LA59_RS07300 PF00005 ABC transporter LA59_RS07305 PF00950 ABC 3 transport family LA59_RS07310 PF00950 ABC 3 transport family LA59_RS07315 PF02833 DHHA2 domain LA59_RS07315 PF01368 DHH family LA59_RS07325 PF00005 ABC transporter LA59_RS07330 PF00005 ABC transporter LA59_RS07330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LA59_RS07335 PF12911 N-terminal TM domain of oligopeptide transport permease C LA59_RS07335 PF00528 Binding-protein-dependent transport system inner membrane component LA59_RS07340 PF00528 Binding-protein-dependent transport system inner membrane component LA59_RS07345 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LA59_RS07350 PF00158 Sigma-54 interaction domain LA59_RS07350 PF02954 Bacterial regulatory protein, Fis family LA59_RS07355 PF04012 PspA/IM30 family LA59_RS07360 PF06667 Phage shock protein B LA59_RS07375 PF13533 Biotin-lipoyl like LA59_RS07380 PF00873 AcrB/AcrD/AcrF family LA59_RS07385 PF03352 Methyladenine glycosylase LA59_RS07390 PF03280 Proteobacterial lipase chaperone protein LA59_RS07395 PF00561 alpha/beta hydrolase fold LA59_RS07400 PF01053 Cys/Met metabolism PLP-dependent enzyme LA59_RS07405 PF13091 PLD-like domain LA59_RS07405 PF13396 Phospholipase_D-nuclease N-terminal LA59_RS07410 PF00209 Sodium:neurotransmitter symporter family LA59_RS07415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_RS07415 PF12729 Four helix bundle sensory module for signal transduction LA59_RS07415 PF00672 HAMP domain LA59_RS07420 PF00849 RNA pseudouridylate synthase LA59_RS07430 PF00175 Oxidoreductase NAD-binding domain LA59_RS07430 PF00111 2Fe-2S iron-sulfur cluster binding domain LA59_RS07430 PF00970 Oxidoreductase FAD-binding domain LA59_RS07435 PF03063 Prismane/CO dehydrogenase family LA59_RS07440 PF01590 GAF domain LA59_RS07440 PF00158 Sigma-54 interaction domain LA59_RS07445 PF01066 CDP-alcohol phosphatidyltransferase LA59_RS07450 PF00005 ABC transporter LA59_RS07455 PF00528 Binding-protein-dependent transport system inner membrane component LA59_RS07460 PF13416 Bacterial extracellular solute-binding protein LA59_RS07465 PF09335 SNARE associated Golgi protein LA59_RS07475 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA59_RS07475 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LA59_RS07485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_RS07485 PF00512 His Kinase A (phospho-acceptor) domain LA59_RS07490 PF00196 Bacterial regulatory proteins, luxR family LA59_RS07490 PF00072 Response regulator receiver domain LA59_RS07500 PF01740 STAS domain LA59_RS07500 PF00916 Sulfate permease family LA59_RS07510 PF06945 Protein of unknown function (DUF1289) LA59_RS07520 PF02872 5'-nucleotidase, C-terminal domain LA59_RS07520 PF00149 Calcineurin-like phosphoesterase LA59_RS07535 PF01386 Ribosomal L25p family LA59_RS07540 PF00535 Glycosyl transferase family 2 LA59_RS07540 PF02709 N-terminal domain of galactosyltransferase LA59_RS07550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_RS07555 PF00072 Response regulator receiver domain LA59_RS07555 PF00486 Transcriptional regulatory protein, C terminal LA59_RS07565 PF04851 Type III restriction enzyme, res subunit LA59_RS07565 PF00271 Helicase conserved C-terminal domain LA59_RS07570 PF00849 RNA pseudouridylate synthase LA59_RS07570 PF01479 S4 domain LA59_RS07575 PF07690 Major Facilitator Superfamily LA59_RS07585 PF00474 Sodium:solute symporter family LA59_RS07590 PF16874 Glycosyl hydrolase family 36 C-terminal domain LA59_RS07590 PF16875 Glycosyl hydrolase family 36 N-terminal domain LA59_RS07595 PF00356 Bacterial regulatory proteins, lacI family LA59_RS07600 PF13460 NAD(P)H-binding LA59_RS07600 PF11066 Protein of unknown function (DUF2867) LA59_RS07605 PF01554 MatE LA59_RS07610 PF00005 ABC transporter LA59_RS07625 PF06965 Na+/H+ antiporter 1 LA59_RS07630 PF00440 Bacterial regulatory proteins, tetR family LA59_RS07630 PF16295 Tetracyclin repressor-like, C-terminal domain LA59_RS07635 PF09317 Domain of unknown function (DUF1974) LA59_RS07635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LA59_RS07635 PF02770 Acyl-CoA dehydrogenase, middle domain LA59_RS07635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LA59_RS07640 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase LA59_RS07640 PF07055 Enoyl reductase FAD binding domain LA59_RS07640 PF12241 Trans-2-enoyl-CoA reductase catalytic region LA59_RS07645 PF06826 Predicted Permease Membrane Region LA59_RS07645 PF02080 TrkA-C domain LA59_RS07650 PF00462 Glutaredoxin LA59_RS07655 PF00465 Iron-containing alcohol dehydrogenase LA59_RS07660 PF01418 Helix-turn-helix domain, rpiR family LA59_RS07660 PF01380 SIS domain LA59_RS07665 PF00282 Pyridoxal-dependent decarboxylase conserved domain LA59_RS07675 PF03956 Lysine exporter LysO LA59_RS07685 PF04994 TfoX C-terminal domain LA59_RS07685 PF04993 TfoX N-terminal domain LA59_RS07700 PF00497 Bacterial extracellular solute-binding proteins, family 3 LA59_RS07700 PF00512 His Kinase A (phospho-acceptor) domain LA59_RS07700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_RS07710 PF00266 Aminotransferase class-V LA59_RS07720 PF07694 5TMR of 5TMR-LYT LA59_RS07720 PF00990 Diguanylate cyclase, GGDEF domain LA59_RS07740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_RS07740 PF03466 LysR substrate binding domain LA59_RS07745 PF02447 GntP family permease LA59_RS07750 PF00291 Pyridoxal-phosphate dependent enzyme LA59_RS07755 PF00005 ABC transporter LA59_RS07755 PF00664 ABC transporter transmembrane region LA59_RS07760 PF00664 ABC transporter transmembrane region LA59_RS07760 PF00005 ABC transporter LA59_RS07765 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA59_RS07775 PF00266 Aminotransferase class-V LA59_RS07785 PF00990 Diguanylate cyclase, GGDEF domain LA59_RS07785 PF08448 PAS fold LA59_RS07790 PF00939 Sodium:sulfate symporter transmembrane region LA59_RS07795 PF02698 DUF218 domain LA59_RS07800 PF00390 Malic enzyme, N-terminal domain LA59_RS07800 PF03949 Malic enzyme, NAD binding domain LA59_RS07805 PF08482 ATP-dependent helicase C-terminal LA59_RS07805 PF04408 Helicase associated domain (HA2) LA59_RS07805 PF00271 Helicase conserved C-terminal domain LA59_RS07805 PF00270 DEAD/DEAH box helicase LA59_RS07815 PF16655 PhoD-like phosphatase, N-terminal domain LA59_RS07815 PF09423 PhoD-like phosphatase LA59_RS07845 PF00939 Sodium:sulfate symporter transmembrane region LA59_RS07850 PF00497 Bacterial extracellular solute-binding proteins, family 3 LA59_RS07850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_RS07850 PF00512 His Kinase A (phospho-acceptor) domain LA59_RS07855 PF02954 Bacterial regulatory protein, Fis family LA59_RS07855 PF00072 Response regulator receiver domain LA59_RS07855 PF00158 Sigma-54 interaction domain LA59_RS07860 PF00563 EAL domain LA59_RS07860 PF03707 Bacterial signalling protein N terminal repeat LA59_RS07860 PF00990 Diguanylate cyclase, GGDEF domain LA59_RS07865 PF11871 Domain of unknown function (DUF3391) LA59_RS07865 PF01966 HD domain LA59_RS07870 PF01810 LysE type translocator LA59_RS07875 PF11230 Protein of unknown function (DUF3029) LA59_RS07880 PF04055 Radical SAM superfamily LA59_RS07885 PF03466 LysR substrate binding domain LA59_RS07885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_RS07890 PF03741 Integral membrane protein TerC family LA59_RS07900 PF01966 HD domain LA59_RS07905 PF00106 short chain dehydrogenase LA59_RS07910 PF00990 Diguanylate cyclase, GGDEF domain LA59_RS07910 PF17158 Membrane-associated sensor, integral membrane domain LA59_RS07920 PF00465 Iron-containing alcohol dehydrogenase LA59_RS07925 PF03222 Tryptophan/tyrosine permease family LA59_RS07940 PF00005 ABC transporter LA59_RS07945 PF01497 Periplasmic binding protein LA59_RS07950 PF01032 FecCD transport family LA59_RS07955 PF07715 TonB-dependent Receptor Plug Domain LA59_RS07955 PF00593 TonB dependent receptor LA59_RS07970 PF00664 ABC transporter transmembrane region LA59_RS07970 PF00005 ABC transporter LA59_RS07975 PF00664 ABC transporter transmembrane region LA59_RS07975 PF00005 ABC transporter LA59_RS07980 PF07963 Prokaryotic N-terminal methylation motif LA59_RS07990 PF03466 LysR substrate binding domain LA59_RS07990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_RS08000 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LA59_RS08000 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LA59_RS08015 PF00012 Hsp70 protein LA59_RS08020 PF00012 Hsp70 protein LA59_RS08030 PF00990 Diguanylate cyclase, GGDEF domain LA59_RS08060 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LA59_RS08060 PF00384 Molybdopterin oxidoreductase LA59_RS08060 PF01568 Molydopterin dinucleotide binding domain LA59_RS08065 PF12800 4Fe-4S binding domain LA59_RS08065 PF13247 4Fe-4S dicluster domain LA59_RS08070 PF04976 DMSO reductase anchor subunit (DmsC) LA59_RS08075 PF02613 Nitrate reductase delta subunit LA59_RS08085 PF02525 Flavodoxin-like fold LA59_RS08090 PF00270 DEAD/DEAH box helicase LA59_RS08090 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LA59_RS08090 PF00271 Helicase conserved C-terminal domain LA59_RS08090 PF11898 Domain of unknown function (DUF3418) LA59_RS08090 PF04408 Helicase associated domain (HA2) LA59_RS08120 PF04204 Homoserine O-succinyltransferase LA59_RS08135 PF00893 Small Multidrug Resistance protein LA59_RS08140 PF13520 Amino acid permease LA59_RS08145 PF01810 LysE type translocator LA59_RS08150 PF03466 LysR substrate binding domain LA59_RS08150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_RS08155 PF03279 Bacterial lipid A biosynthesis acyltransferase LA59_RS08170 PF01047 MarR family LA59_RS08185 PF00239 Resolvase, N terminal domain LA59_RS08185 PF07508 Recombinase LA59_RS08185 PF13408 Recombinase zinc beta ribbon domain LA59_RS08215 PF02796 Helix-turn-helix domain of resolvase LA59_RS08215 PF00239 Resolvase, N terminal domain LA59_RS08280 PF13651 Adenine-specific methyltransferase EcoRI LA59_RS08290 PF02074 Carboxypeptidase Taq (M32) metallopeptidase LA59_RS08295 PF00196 Bacterial regulatory proteins, luxR family LA59_RS08295 PF00072 Response regulator receiver domain LA59_RS08330 PF01810 LysE type translocator LA59_RS08340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LA59_RS08340 PF00529 HlyD membrane-fusion protein of T1SS LA59_RS08345 PF00873 AcrB/AcrD/AcrF family LA59_RS08350 PF16868 NMT1-like family LA59_RS08355 PF01925 Sulfite exporter TauE/SafE LA59_RS08360 PF01970 Tripartite tricarboxylate transporter TctA family LA59_RS08380 PF00583 Acetyltransferase (GNAT) family LA59_RS08395 PF03793 PASTA domain LA59_RS08395 PF00069 Protein kinase domain LA59_RS08410 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE LA59_RS08430 PF07724 AAA domain (Cdc48 subfamily) LA59_RS08430 PF00004 ATPase family associated with various cellular activities (AAA) LA59_RS08430 PF10431 C-terminal, D2-small domain, of ClpB protein LA59_RS08430 PF17871 AAA lid domain LA59_RS08450 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath LA59_RS08455 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath LA59_RS08485 PF04717 Type VI secretion system, phage-baseplate injector LA59_RS08485 PF06715 Gp5 C-terminal repeat (3 copies) LA59_RS08505 PF00285 Citrate synthase, C-terminal domain LA59_RS08510 PF00330 Aconitase family (aconitate hydratase) LA59_RS08510 PF00694 Aconitase C-terminal domain LA59_RS08515 PF04303 PrpF protein LA59_RS08520 PF16177 Acetyl-coenzyme A synthetase N-terminus LA59_RS08520 PF13193 AMP-binding enzyme C-terminal domain LA59_RS08520 PF00501 AMP-binding enzyme LA59_RS08530 PF00089 Trypsin LA59_RS08545 PF04055 Radical SAM superfamily LA59_RS08550 PF06508 Queuosine biosynthesis protein QueC LA59_RS08555 PF13185 GAF domain LA59_RS08555 PF00990 Diguanylate cyclase, GGDEF domain LA59_RS08565 PF00691 OmpA family LA59_RS08565 PF05736 OprF membrane domain LA59_RS08590 PF13322 Domain of unknown function (DUF4092) LA59_RS08590 PF17291 N-terminal domain of M60-like peptidases LA59_RS08590 PF13402 Peptidase M60, enhancin and enhancin-like LA59_RS08600 PF02397 Bacterial sugar transferase LA59_RS08605 PF00535 Glycosyl transferase family 2 LA59_RS08610 PF00534 Glycosyl transferases group 1 LA59_RS08610 PF13439 Glycosyltransferase Family 4 LA59_RS08640 PF00534 Glycosyl transferases group 1 LA59_RS08640 PF13439 Glycosyltransferase Family 4 LA59_RS08645 PF00534 Glycosyl transferases group 1 LA59_RS08645 PF13439 Glycosyltransferase Family 4 LA59_RS08650 PF02954 Bacterial regulatory protein, Fis family LA59_RS08650 PF00158 Sigma-54 interaction domain LA59_RS08650 PF00072 Response regulator receiver domain LA59_RS08665 PF10531 SLBB domain LA59_RS08665 PF02563 Polysaccharide biosynthesis/export protein LA59_RS08675 PF01740 STAS domain LA59_RS08680 PF14743 DNA ligase OB-like domain LA59_RS08680 PF01068 ATP dependent DNA ligase domain LA59_RS08690 PF01554 MatE LA59_RS08695 PF00677 Lumazine binding domain LA59_RS08705 PF03881 Fructosamine kinase LA59_RS08710 PF01339 CheB methylesterase LA59_RS08710 PF00072 Response regulator receiver domain LA59_RS08715 PF05230 MASE2 domain LA59_RS08715 PF00990 Diguanylate cyclase, GGDEF domain LA59_RS08725 PF00877 NlpC/P60 family LA59_RS08730 PF12729 Four helix bundle sensory module for signal transduction LA59_RS08730 PF00672 HAMP domain LA59_RS08730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_RS08770 PF03942 DTW domain LA59_RS08775 PF00480 ROK family LA59_RS08785 PF00994 Probable molybdopterin binding domain LA59_RS08785 PF03454 MoeA C-terminal region (domain IV) LA59_RS08785 PF03453 MoeA N-terminal region (domain I and II) LA59_RS08790 PF12804 MobA-like NTP transferase domain LA59_RS08795 PF08402 TOBE domain LA59_RS08795 PF00005 ABC transporter LA59_RS08800 PF00528 Binding-protein-dependent transport system inner membrane component LA59_RS08805 PF12849 PBP superfamily domain LA59_RS08810 PF00158 Sigma-54 interaction domain LA59_RS08810 PF00072 Response regulator receiver domain LA59_RS08810 PF02954 Bacterial regulatory protein, Fis family LA59_RS08815 PF00512 His Kinase A (phospho-acceptor) domain LA59_RS08815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_RS08830 PF00005 ABC transporter LA59_RS08830 PF12848 ABC transporter LA59_RS08835 PF02634 FdhD/NarQ family LA59_RS08855 PF02613 Nitrate reductase delta subunit LA59_RS08865 PF00384 Molybdopterin oxidoreductase LA59_RS08865 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LA59_RS08865 PF01568 Molydopterin dinucleotide binding domain LA59_RS08870 PF13247 4Fe-4S dicluster domain LA59_RS08890 PF02146 Sir2 family LA59_RS08895 PF13416 Bacterial extracellular solute-binding protein LA59_RS08900 PF13416 Bacterial extracellular solute-binding protein LA59_RS08905 PF00528 Binding-protein-dependent transport system inner membrane component LA59_RS08910 PF00528 Binding-protein-dependent transport system inner membrane component LA59_RS08915 PF08402 TOBE domain LA59_RS08915 PF00005 ABC transporter LA59_RS08925 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LA59_RS08935 PF01171 PP-loop family LA59_RS08940 PF00582 Universal stress protein family LA59_RS08945 PF00027 Cyclic nucleotide-binding domain LA59_RS08945 PF13545 Crp-like helix-turn-helix domain LA59_RS08960 PF00403 Heavy-metal-associated domain LA59_RS08970 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LA59_RS08970 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP LA59_RS08985 PF00115 Cytochrome C and Quinol oxidase polypeptide I LA59_RS09000 PF00512 His Kinase A (phospho-acceptor) domain LA59_RS09000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_RS09000 PF09308 LuxQ, periplasmic LA59_RS09000 PF00072 Response regulator receiver domain LA59_RS09025 PF17414 MatP C-terminal ribbon-helix-helix domain LA59_RS09025 PF06303 MatP N-terminal domain LA59_RS09030 PF05362 Lon protease (S16) C-terminal proteolytic domain LA59_RS09030 PF13654 AAA domain LA59_RS09035 PF07977 FabA-like domain LA59_RS09040 PF04957 Ribosome modulation factor LA59_RS09050 PF12848 ABC transporter LA59_RS09050 PF16326 ABC transporter C-terminal domain LA59_RS09050 PF00005 ABC transporter LA59_RS09060 PF01170 Putative RNA methylase family UPF0020 LA59_RS09060 PF02926 THUMP domain LA59_RS09060 PF10672 S-adenosylmethionine-dependent methyltransferase LA59_RS09065 PF07126 Cell-division protein ZapC LA59_RS09070 PF01180 Dihydroorotate dehydrogenase LA59_RS09075 PF05088 Bacterial NAD-glutamate dehydrogenase LA59_RS09080 PF11940 Domain of unknown function (DUF3458) Ig-like fold LA59_RS09080 PF01433 Peptidase family M1 domain LA59_RS09080 PF17432 Domain of unknown function (DUF3458_C) ARM repeats LA59_RS09090 PF00595 PDZ domain LA59_RS09090 PF17804 Tail specific protease N-terminal domain LA59_RS09090 PF03572 Peptidase family S41 LA59_RS09090 PF11818 C-terminal domain of tail specific protease (DUF3340) LA59_RS09095 PF17516 ProQ C-terminal domain LA59_RS09095 PF04352 ProQ/FINO family LA59_RS09100 PF13185 GAF domain LA59_RS09105 PF00664 ABC transporter transmembrane region LA59_RS09105 PF00005 ABC transporter LA59_RS09110 PF04403 Paraquat-inducible protein A LA59_RS09115 PF02470 MlaD protein LA59_RS09120 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF LA59_RS09120 PF01189 16S rRNA methyltransferase RsmB/F LA59_RS09120 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF LA59_RS09140 PF00793 DAHP synthetase I family LA59_RS09145 PF04461 Protein of unknown function (DUF520) LA59_RS09150 PF10414 Sirohaem synthase dimerisation region LA59_RS09150 PF14824 Sirohaem biosynthesis protein central LA59_RS09150 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LA59_RS09155 PF00497 Bacterial extracellular solute-binding proteins, family 3 LA59_RS09160 PF00528 Binding-protein-dependent transport system inner membrane component LA59_RS09165 PF00528 Binding-protein-dependent transport system inner membrane component LA59_RS09170 PF00005 ABC transporter LA59_RS09175 PF01027 Inhibitor of apoptosis-promoting Bax1 LA59_RS09180 PF04358 DsrC like protein LA59_RS09185 PF00708 Acylphosphatase LA59_RS09190 PF00672 HAMP domain LA59_RS09190 PF02743 Cache domain LA59_RS09190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_RS09195 PF10672 S-adenosylmethionine-dependent methyltransferase LA59_RS09195 PF17785 PUA-like domain LA59_RS09210 PF05736 OprF membrane domain LA59_RS09210 PF00691 OmpA family LA59_RS09215 PF13188 PAS domain LA59_RS09215 PF03707 Bacterial signalling protein N terminal repeat LA59_RS09215 PF00563 EAL domain LA59_RS09215 PF00990 Diguanylate cyclase, GGDEF domain LA59_RS09220 PF01627 Hpt domain LA59_RS09220 PF00072 Response regulator receiver domain LA59_RS09220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_RS09220 PF00672 HAMP domain LA59_RS09220 PF00512 His Kinase A (phospho-acceptor) domain LA59_RS09220 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LA59_RS09235 PF12464 Maltose acetyltransferase LA59_RS09235 PF00132 Bacterial transferase hexapeptide (six repeats) LA59_RS09245 PF01928 CYTH domain LA59_RS09255 PF01047 MarR family LA59_RS09265 PF03729 Short repeat of unknown function (DUF308) LA59_RS09270 PF00924 Mechanosensitive ion channel LA59_RS09285 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family LA59_RS09295 PF05736 OprF membrane domain LA59_RS09295 PF00691 OmpA family LA59_RS09330 PF00437 Type II/IV secretion system protein LA59_RS09345 PF04972 BON domain LA59_RS09345 PF13629 Pilus formation protein N terminal region LA59_RS09345 PF00263 Bacterial type II and III secretion system protein LA59_RS09365 PF01906 Putative heavy-metal-binding LA59_RS09370 PF05656 Protein of unknown function (DUF805) LA59_RS09375 PF03466 LysR substrate binding domain LA59_RS09375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_RS09380 PF12833 Helix-turn-helix domain LA59_RS09390 PF01752 Collagenase LA59_RS09390 PF08453 Peptidase family M9 N-terminal LA59_RS09390 PF04151 Bacterial pre-peptidase C-terminal domain LA59_RS09400 PF00582 Universal stress protein family LA59_RS09405 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LA59_RS09405 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LA59_RS09410 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LA59_RS09415 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LA59_RS09415 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LA59_RS09420 PF12833 Helix-turn-helix domain LA59_RS09425 PF00593 TonB dependent receptor LA59_RS09425 PF07715 TonB-dependent Receptor Plug Domain LA59_RS09430 PF12431 Transcriptional regulator LA59_RS09430 PF00072 Response regulator receiver domain LA59_RS09435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_RS09435 PF00989 PAS fold LA59_RS09435 PF17203 Single cache domain 3 LA59_RS09435 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LA59_RS09450 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LA59_RS09480 PF07549 SecD/SecF GG Motif LA59_RS09480 PF13721 SecD export protein N-terminal TM region LA59_RS09480 PF02355 Protein export membrane protein LA59_RS09485 PF07549 SecD/SecF GG Motif LA59_RS09485 PF02355 Protein export membrane protein LA59_RS09490 PF01699 Sodium/calcium exchanger protein LA59_RS09500 PF01769 Divalent cation transporter LA59_RS09500 PF03448 MgtE intracellular N domain LA59_RS09500 PF00571 CBS domain LA59_RS09505 PF01914 MarC family integral membrane protein LA59_RS09520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_RS09520 PF03466 LysR substrate binding domain LA59_RS09525 PF00924 Mechanosensitive ion channel LA59_RS09540 PF01794 Ferric reductase like transmembrane component LA59_RS09545 PF00174 Oxidoreductase molybdopterin binding domain LA59_RS09575 PF07729 FCD domain LA59_RS09575 PF00392 Bacterial regulatory proteins, gntR family LA59_RS09580 PF01810 LysE type translocator LA59_RS09590 PF05368 NmrA-like family LA59_RS09595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_RS09595 PF03466 LysR substrate binding domain LA59_RS09600 PF05922 Peptidase inhibitor I9 LA59_RS09600 PF04151 Bacterial pre-peptidase C-terminal domain LA59_RS09600 PF00082 Subtilase family LA59_RS09605 PF00034 Cytochrome c LA59_RS09605 PF03150 Di-haem cytochrome c peroxidase LA59_RS09615 PF00696 Amino acid kinase family LA59_RS09615 PF13840 ACT domain LA59_RS09620 PF06339 Ectoine synthase LA59_RS09625 PF00202 Aminotransferase class-III LA59_RS09630 PF00583 Acetyltransferase (GNAT) family LA59_RS09635 PF02028 BCCT, betaine/carnitine/choline family transporter LA59_RS09645 PF00571 CBS domain LA59_RS09650 PF01554 MatE LA59_RS09665 PF00884 Sulfatase LA59_RS09680 PF02311 AraC-like ligand binding domain LA59_RS09680 PF12833 Helix-turn-helix domain LA59_RS09695 PF01235 Sodium:alanine symporter family LA59_RS09700 PF00171 Aldehyde dehydrogenase family LA59_RS09705 PF02954 Bacterial regulatory protein, Fis family LA59_RS09705 PF00158 Sigma-54 interaction domain LA59_RS09705 PF01590 GAF domain LA59_RS09735 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase LA59_RS09740 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase LA59_RS09745 PF04223 Citrate lyase, alpha subunit (CitF) LA59_RS09750 PF03328 HpcH/HpaI aldolase/citrate lyase family LA59_RS09755 PF06857 Malonate decarboxylase delta subunit (MdcD) LA59_RS09760 PF08218 Citrate lyase ligase C-terminal domain LA59_RS09765 PF03390 2-hydroxycarboxylate transporter family LA59_RS09770 PF04277 Oxaloacetate decarboxylase, gamma chain LA59_RS09775 PF00364 Biotin-requiring enzyme LA59_RS09775 PF02436 Conserved carboxylase domain LA59_RS09775 PF00682 HMGL-like LA59_RS09780 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit LA59_RS09785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_RS09785 PF17203 Single cache domain 3 LA59_RS09790 PF00072 Response regulator receiver domain LA59_RS09790 PF12431 Transcriptional regulator LA59_RS09815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LA59_RS09830 PF00293 NUDIX domain LA59_RS09880 PF02798 Glutathione S-transferase, N-terminal domain LA59_RS09880 PF14497 Glutathione S-transferase, C-terminal domain LA59_RS09890 PF04209 homogentisate 1,2-dioxygenase LA59_RS09895 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LA59_RS09905 PF01546 Peptidase family M20/M25/M40 LA59_RS09905 PF07687 Peptidase dimerisation domain LA59_RS09910 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LA59_RS09915 PF00528 Binding-protein-dependent transport system inner membrane component LA59_RS09920 PF00528 Binding-protein-dependent transport system inner membrane component LA59_RS09920 PF12911 N-terminal TM domain of oligopeptide transport permease C LA59_RS09925 PF00005 ABC transporter LA59_RS09925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LA59_RS09930 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LA59_RS09930 PF00005 ABC transporter LA59_RS09945 PF12561 ToxR activated gene A lipoprotein domain LA59_RS09945 PF00041 Fibronectin type III domain LA59_RS09950 PF01752 Collagenase LA59_RS09950 PF08453 Peptidase family M9 N-terminal LA59_RS09960 PF00512 His Kinase A (phospho-acceptor) domain LA59_RS09960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_RS09965 PF00486 Transcriptional regulatory protein, C terminal LA59_RS09965 PF00072 Response regulator receiver domain LA59_RS09975 PF00873 AcrB/AcrD/AcrF family LA59_RS09980 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LA59_RS09980 PF00529 HlyD membrane-fusion protein of T1SS LA59_RS10000 PF01048 Phosphorylase superfamily LA59_RS10005 PF00528 Binding-protein-dependent transport system inner membrane component LA59_RS10010 PF00528 Binding-protein-dependent transport system inner membrane component LA59_RS10015 PF08402 TOBE domain LA59_RS10015 PF00005 ABC transporter LA59_RS10020 PF00171 Aldehyde dehydrogenase family LA59_RS10035 PF00990 Diguanylate cyclase, GGDEF domain LA59_RS10035 PF08448 PAS fold LA59_RS10040 PF05971 RNA methyltransferase LA59_RS10045 PF01863 Protein of unknown function DUF45 LA59_RS10070 PF03466 LysR substrate binding domain LA59_RS10070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_RS10075 PF07690 Major Facilitator Superfamily LA59_RS10110 PF00005 ABC transporter LA59_RS10115 PF01032 FecCD transport family LA59_RS10120 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family LA59_RS10130 PF00300 Histidine phosphatase superfamily (branch 1) LA59_RS10135 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase LA59_RS10140 PF02654 Cobalamin-5-phosphate synthase LA59_RS10145 PF02277 Phosphoribosyltransferase LA59_RS10150 PF01613 Flavin reductase like domain LA59_RS10155 PF13460 NAD(P)H-binding LA59_RS10160 PF00375 Sodium:dicarboxylate symporter family LA59_RS10170 PF00929 Exonuclease LA59_RS10170 PF08411 Exonuclease C-terminal LA59_RS10175 PF03788 LrgA family LA59_RS10180 PF04172 LrgB-like family LA59_RS10185 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region LA59_RS10185 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LA59_RS10190 PF02222 ATP-grasp domain LA59_RS10195 PF05724 Thiopurine S-methyltransferase (TPMT) LA59_RS10205 PF00216 Bacterial DNA-binding protein LA59_RS10245 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LA59_RS10245 PF01588 Putative tRNA binding domain LA59_RS10245 PF03147 Ferredoxin-fold anticodon binding domain LA59_RS10245 PF03483 B3/4 domain LA59_RS10245 PF03484 tRNA synthetase B5 domain LA59_RS10250 PF01409 tRNA synthetases class II core domain (F) LA59_RS10250 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LA59_RS10290 PF01906 Putative heavy-metal-binding LA59_RS10295 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LA59_RS10300 PF01042 Endoribonuclease L-PSP LA59_RS10305 PF00453 Ribosomal protein L20 LA59_RS10310 PF01632 Ribosomal protein L35 LA59_RS10315 PF05198 Translation initiation factor IF-3, N-terminal domain LA59_RS10315 PF00707 Translation initiation factor IF-3, C-terminal domain LA59_RS10320 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LA59_RS10320 PF03129 Anticodon binding domain LA59_RS10320 PF02824 TGS domain LA59_RS10320 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LA59_RS10335 PF00392 Bacterial regulatory proteins, gntR family LA59_RS10335 PF07702 UTRA domain LA59_RS10340 PF01979 Amidohydrolase family LA59_RS10345 PF00491 Arginase family LA59_RS10350 PF17392 Urocanase C-terminal domain LA59_RS10350 PF01175 Urocanase Rossmann-like domain LA59_RS10350 PF17391 Urocanase N-terminal domain LA59_RS10355 PF00221 Aromatic amino acid lyase LA59_RS10370 PF13183 4Fe-4S dicluster domain LA59_RS10370 PF02913 FAD linked oxidases, C-terminal domain LA59_RS10370 PF01565 FAD binding domain LA59_RS10385 PF00691 OmpA family LA59_RS10385 PF05736 OprF membrane domain LA59_RS10405 PF01259 SAICAR synthetase LA59_RS10440 PF00958 GMP synthase C terminal domain LA59_RS10440 PF00117 Glutamine amidotransferase class-I LA59_RS10440 PF13302 Acetyltransferase (GNAT) domain LA59_RS10440 PF03352 Methyladenine glycosylase LA59_RS10440 PF13673 Acetyltransferase (GNAT) domain LA59_RS10640 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LA59_RS10640 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LA59_RS10680 PF07883 Cupin domain LA59_RS10710 PF08378 Nuclease-related domain LA59_RS10955 PF04229 GrpB protein LA59_RS10965 PF01844 HNH endonuclease LA59_RS11025 PF00589 Phage integrase family LA59_RS11025 PF13495 Phage integrase, N-terminal SAM-like domain LA59_RS11040 PF13302 Acetyltransferase (GNAT) domain LA59_RS11045 PF18024 Helix-turn-helix domain LA59_RS11045 PF00158 Sigma-54 interaction domain LA59_RS11050 PF05128 Domain of unknown function (DUF697) LA59_RS11055 PF04317 YcjX-like family, DUF463 LA59_RS11070 PF04715 Anthranilate synthase component I, N terminal region LA59_RS11070 PF00425 chorismate binding enzyme LA59_RS11075 PF00072 Response regulator receiver domain LA59_RS11075 PF09308 LuxQ, periplasmic LA59_RS11075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_RS11075 PF00512 His Kinase A (phospho-acceptor) domain LA59_RS11085 PF00293 NUDIX domain LA59_RS11090 PF03222 Tryptophan/tyrosine permease family LA59_RS11095 PF03315 Serine dehydratase beta chain LA59_RS11095 PF03313 Serine dehydratase alpha chain LA59_RS11100 PF13188 PAS domain LA59_RS11100 PF03707 Bacterial signalling protein N terminal repeat LA59_RS11100 PF00990 Diguanylate cyclase, GGDEF domain LA59_RS11100 PF00563 EAL domain LA59_RS11110 PF00196 Bacterial regulatory proteins, luxR family LA59_RS11110 PF00072 Response regulator receiver domain LA59_RS11115 PF01242 6-pyruvoyl tetrahydropterin synthase LA59_RS11120 PF17200 Single Cache domain 2 LA59_RS11120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_RS11120 PF00672 HAMP domain LA59_RS11125 PF00152 tRNA synthetases class II (D, K and N) LA59_RS11125 PF01336 OB-fold nucleic acid binding domain LA59_RS11140 PF00392 Bacterial regulatory proteins, gntR family LA59_RS11140 PF00155 Aminotransferase class I and II LA59_RS11155 PF01966 HD domain LA59_RS11155 PF00672 HAMP domain LA59_RS11160 PF00155 Aminotransferase class I and II LA59_RS11180 PF00672 HAMP domain LA59_RS11180 PF02743 Cache domain LA59_RS11180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_RS11185 PF02028 BCCT, betaine/carnitine/choline family transporter LA59_RS11190 PF01047 MarR family LA59_RS11195 PF00196 Bacterial regulatory proteins, luxR family LA59_RS11195 PF00072 Response regulator receiver domain LA59_RS11200 PF17200 Single Cache domain 2 LA59_RS11200 PF07730 Histidine kinase LA59_RS11205 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LA59_RS11215 PF03480 Bacterial extracellular solute-binding protein, family 7 LA59_RS11230 PF00753 Metallo-beta-lactamase superfamily LA59_RS11235 PF05951 Bacterial protein of unknown function (DUF882) LA59_RS11240 PF03734 L,D-transpeptidase catalytic domain LA59_RS11240 PF01471 Putative peptidoglycan binding domain LA59_RS11265 PF00925 GTP cyclohydrolase II LA59_RS11275 PF03918 Cytochrome C biogenesis protein LA59_RS11280 PF08534 Redoxin LA59_RS11285 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LA59_RS11285 PF01578 Cytochrome C assembly protein LA59_RS11290 PF03916 Polysulphide reductase, NrfD LA59_RS11295 PF13247 4Fe-4S dicluster domain LA59_RS11305 PF02335 Cytochrome c552 LA59_RS11320 PF00521 DNA gyrase/topoisomerase IV, subunit A LA59_RS11320 PF03989 DNA gyrase C-terminal domain, beta-propeller LA59_RS11335 PF00317 Ribonucleotide reductase, all-alpha domain LA59_RS11335 PF03477 ATP cone domain LA59_RS11335 PF02867 Ribonucleotide reductase, barrel domain LA59_RS11340 PF00268 Ribonucleotide reductase, small chain LA59_RS11350 PF00994 Probable molybdopterin binding domain LA59_RS11365 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LA59_RS11370 PF03435 Saccharopine dehydrogenase NADP binding domain LA59_RS11370 PF16653 Saccharopine dehydrogenase C-terminal domain LA59_RS11375 PF00202 Aminotransferase class-III LA59_RS11405 PF01066 CDP-alcohol phosphatidyltransferase LA59_RS11410 PF01541 GIY-YIG catalytic domain LA59_RS11410 PF02151 UvrB/uvrC motif LA59_RS11410 PF08459 UvrC Helix-hairpin-helix N-terminal LA59_RS11415 PF00196 Bacterial regulatory proteins, luxR family LA59_RS11415 PF00072 Response regulator receiver domain LA59_RS11420 PF00136 DNA polymerase family B LA59_RS11420 PF03104 DNA polymerase family B, exonuclease domain LA59_RS11430 PF09285 Elongation factor P, C-terminal LA59_RS11430 PF08207 Elongation factor P (EF-P) KOW-like domain LA59_RS11430 PF01132 Elongation factor P (EF-P) OB domain LA59_RS11435 PF04269 Protein of unknown function, DUF440 LA59_RS11440 PF01479 S4 domain LA59_RS11440 PF00849 RNA pseudouridylate synthase LA59_RS11450 PF01300 Telomere recombination LA59_RS11455 PF02811 PHP domain LA59_RS11460 PF08056 Tryptophan operon leader peptide LA59_RS11465 PF00425 chorismate binding enzyme LA59_RS11465 PF04715 Anthranilate synthase component I, N terminal region LA59_RS11470 PF00117 Glutamine amidotransferase class-I LA59_RS11475 PF00591 Glycosyl transferase family, a/b domain LA59_RS11475 PF02885 Glycosyl transferase family, helical bundle domain LA59_RS11480 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LA59_RS11480 PF00218 Indole-3-glycerol phosphate synthase LA59_RS11485 PF00291 Pyridoxal-phosphate dependent enzyme LA59_RS11490 PF00290 Tryptophan synthase alpha chain LA59_RS11495 PF00375 Sodium:dicarboxylate symporter family LA59_RS11500 PF17327 Acyl homoserine lactone synthase LA59_RS11505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_RS11505 PF00072 Response regulator receiver domain LA59_RS11515 PF04279 Intracellular septation protein A LA59_RS11520 PF03061 Thioesterase superfamily LA59_RS11525 PF03795 YCII-related domain LA59_RS11535 PF08267 Cobalamin-independent synthase, N-terminal domain LA59_RS11535 PF01717 Cobalamin-independent synthase, Catalytic domain LA59_RS11540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_RS11540 PF03466 LysR substrate binding domain LA59_RS11555 PF00990 Diguanylate cyclase, GGDEF domain LA59_RS11555 PF00498 FHA domain LA59_RS11555 PF00563 EAL domain LA59_RS11560 PF08497 Radical SAM N-terminal LA59_RS11560 PF04055 Radical SAM superfamily LA59_RS11560 PF11842 Domain of unknown function (DUF3362) LA59_RS11585 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LA59_RS11585 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA59_RS11590 PF00375 Sodium:dicarboxylate symporter family LA59_RS11595 PF01042 Endoribonuclease L-PSP LA59_RS11600 PF13309 HTH domain LA59_RS11600 PF08348 YheO-like PAS domain LA59_RS11605 PF00672 HAMP domain LA59_RS11605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_RS11615 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase LA59_RS11620 PF00535 Glycosyl transferase family 2 LA59_RS11625 PF00486 Transcriptional regulatory protein, C terminal LA59_RS11625 PF00072 Response regulator receiver domain LA59_RS11630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_RS11630 PF00672 HAMP domain LA59_RS11630 PF00512 His Kinase A (phospho-acceptor) domain LA59_RS11650 PF03466 LysR substrate binding domain LA59_RS11650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_RS11655 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LA59_RS11655 PF00529 HlyD membrane-fusion protein of T1SS LA59_RS11665 PF01047 MarR family LA59_RS11680 PF01717 Cobalamin-independent synthase, Catalytic domain LA59_RS11680 PF08267 Cobalamin-independent synthase, N-terminal domain LA59_RS11710 PF00005 ABC transporter LA59_RS11710 PF12704 MacB-like periplasmic core domain LA59_RS11710 PF02687 FtsX-like permease family LA59_RS11715 PF12704 MacB-like periplasmic core domain LA59_RS11715 PF02687 FtsX-like permease family LA59_RS11715 PF00005 ABC transporter LA59_RS11720 PF02687 FtsX-like permease family LA59_RS11720 PF12704 MacB-like periplasmic core domain LA59_RS11740 PF00440 Bacterial regulatory proteins, tetR family LA59_RS11745 PF00583 Acetyltransferase (GNAT) family LA59_RS11775 PF05958 tRNA (Uracil-5-)-methyltransferase LA59_RS11775 PF01938 TRAM domain LA59_RS11785 PF00085 Thioredoxin LA59_RS11790 PF11412 Disulphide bond corrector protein DsbC LA59_RS11790 PF02683 Cytochrome C biogenesis protein transmembrane region LA59_RS11800 PF03466 LysR substrate binding domain LA59_RS11800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_RS11805 PF04403 Paraquat-inducible protein A LA59_RS11810 PF02470 MlaD protein LA59_RS11815 PF03886 ABC-type transport auxiliary lipoprotein component LA59_RS11870 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LA59_RS11875 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LA59_RS11880 PF18073 Rubredoxin metal binding domain LA59_RS11885 PF06305 Lipopolysaccharide assembly protein A domain LA59_RS11890 PF00216 Bacterial DNA-binding protein LA59_RS11895 PF00575 S1 RNA binding domain LA59_RS11900 PF02224 Cytidylate kinase LA59_RS11905 PF01343 Peptidase family S49 LA59_RS11905 PF08496 Peptidase family S49 N-terminal LA59_RS11910 PF00106 short chain dehydrogenase LA59_RS11925 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LA59_RS11925 PF01336 OB-fold nucleic acid binding domain LA59_RS11925 PF07733 Bacterial DNA polymerase III alpha NTPase domain LA59_RS11925 PF02811 PHP domain LA59_RS11925 PF14579 Helix-hairpin-helix motif LA59_RS11930 PF00072 Response regulator receiver domain LA59_RS11930 PF01584 CheW-like domain LA59_RS11935 PF00480 ROK family LA59_RS11940 PF00224 Pyruvate kinase, barrel domain LA59_RS11940 PF02887 Pyruvate kinase, alpha/beta domain LA59_RS11945 PF01734 Patatin-like phospholipase LA59_RS11955 PF00209 Sodium:neurotransmitter symporter family LA59_RS11965 PF02378 Phosphotransferase system, EIIC LA59_RS11965 PF00367 phosphotransferase system, EIIB LA59_RS11970 PF01026 TatD related DNase LA59_RS11975 PF09115 DNA polymerase III, delta subunit, C terminal LA59_RS11980 PF02223 Thymidylate kinase LA59_RS11985 PF02618 YceG-like family LA59_RS11990 PF01063 Amino-transferase class IV LA59_RS11995 PF00109 Beta-ketoacyl synthase, N-terminal domain LA59_RS11995 PF02801 Beta-ketoacyl synthase, C-terminal domain LA59_RS12000 PF00550 Phosphopantetheine attachment site LA59_RS12010 PF00698 Acyl transferase domain LA59_RS12015 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LA59_RS12015 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LA59_RS12020 PF02504 Fatty acid synthesis protein LA59_RS12025 PF01783 Ribosomal L32p protein family LA59_RS12030 PF02620 Large ribosomal RNA subunit accumulation protein YceD LA59_RS12035 PF02545 Maf-like protein LA59_RS12040 PF01479 S4 domain LA59_RS12040 PF00849 RNA pseudouridylate synthase LA59_RS12055 PF00916 Sulfate permease family LA59_RS12055 PF01740 STAS domain LA59_RS12060 PF01451 Low molecular weight phosphotyrosine protein phosphatase LA59_RS12065 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP LA59_RS12065 PF12557 Cob(I)alamin adenosyltransferase N terminal LA59_RS12075 PF00485 Phosphoribulokinase / Uridine kinase family LA59_RS12080 PF10609 NUBPL iron-transfer P-loop NTPase LA59_RS12085 PF09334 tRNA synthetases class I (M) LA59_RS12085 PF01588 Putative tRNA binding domain LA59_RS12095 PF00392 Bacterial regulatory proteins, gntR family LA59_RS12095 PF07840 FadR C-terminal domain LA59_RS12100 PF06450 Bacterial Na+/H+ antiporter B (NhaB) LA59_RS12105 PF02600 Disulfide bond formation protein DsbB LA59_RS12110 PF07517 SecA DEAD-like domain LA59_RS12110 PF01043 SecA preprotein cross-linking domain LA59_RS12110 PF07516 SecA Wing and Scaffold domain LA59_RS12110 PF02810 SEC-C motif LA59_RS12115 PF01207 Dihydrouridine synthase (Dus) LA59_RS12120 PF00990 Diguanylate cyclase, GGDEF domain LA59_RS12125 PF00128 Alpha amylase, catalytic domain LA59_RS12125 PF02903 Alpha amylase, N-terminal ig-like domain LA59_RS12130 PF00005 ABC transporter LA59_RS12135 PF02653 Branched-chain amino acid transport system / permease component LA59_RS12150 PF04217 Protein of unknown function, DUF412 LA59_RS12155 PF00871 Acetokinase family LA59_RS12160 PF07085 DRTGG domain LA59_RS12160 PF01515 Phosphate acetyl/butaryl transferase LA59_RS12165 PF13194 Domain of unknown function (DUF4010) LA59_RS12170 PF13409 Glutathione S-transferase, N-terminal domain LA59_RS12175 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LA59_RS12175 PF00005 ABC transporter LA59_RS12180 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LA59_RS12180 PF00005 ABC transporter LA59_RS12185 PF00528 Binding-protein-dependent transport system inner membrane component LA59_RS12185 PF12911 N-terminal TM domain of oligopeptide transport permease C LA59_RS12190 PF00528 Binding-protein-dependent transport system inner membrane component LA59_RS12195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LA59_RS12200 PF02391 MoaE protein LA59_RS12205 PF02597 ThiS family LA59_RS12210 PF01967 MoaC family LA59_RS12215 PF00994 Probable molybdopterin binding domain LA59_RS12220 PF04055 Radical SAM superfamily LA59_RS12220 PF06463 Molybdenum Cofactor Synthesis C LA59_RS12225 PF01933 Uncharacterised protein family UPF0052 LA59_RS12230 PF01627 Hpt domain LA59_RS12235 PF00158 Sigma-54 interaction domain LA59_RS12235 PF00072 Response regulator receiver domain LA59_RS12235 PF02954 Bacterial regulatory protein, Fis family LA59_RS12240 PF04851 Type III restriction enzyme, res subunit LA59_RS12240 PF12344 Ultra-violet resistance protein B LA59_RS12240 PF02151 UvrB/uvrC motif LA59_RS12240 PF00271 Helicase conserved C-terminal domain LA59_RS12240 PF17757 UvrB interaction domain LA59_RS12250 PF02901 Pyruvate formate lyase-like LA59_RS12250 PF01228 Glycine radical LA59_RS12255 PF02508 Rnf-Nqr subunit, membrane protein LA59_RS12260 PF04060 Putative Fe-S cluster LA59_RS12265 PF10531 SLBB domain LA59_RS12265 PF12838 4Fe-4S dicluster domain LA59_RS12265 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LA59_RS12265 PF13375 RnfC Barrel sandwich hybrid domain LA59_RS12270 PF03116 NQR2, RnfD, RnfE family LA59_RS12275 PF04205 FMN-binding domain LA59_RS12280 PF02508 Rnf-Nqr subunit, membrane protein LA59_RS12285 PF00730 HhH-GPD superfamily base excision DNA repair protein LA59_RS12285 PF10576 Iron-sulfur binding domain of endonuclease III LA59_RS12285 PF00633 Helix-hairpin-helix motif LA59_RS12290 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LA59_RS12295 PF10952 Protein of unknown function (DUF2753) LA59_RS12300 PF00691 OmpA family LA59_RS12300 PF18393 MotY N-terminal domain LA59_RS12305 PF00929 Exonuclease LA59_RS12310 PF13726 Na+-H+ antiporter family LA59_RS12310 PF03553 Na+/H+ antiporter family LA59_RS12345 PF03135 CagE, TrbE, VirB family, component of type IV transporter system LA59_RS12370 PF03524 Conjugal transfer protein LA59_RS12375 PF03743 Bacterial conjugation TrbI-like protein LA59_RS12385 PF00437 Type II/IV secretion system protein LA59_RS12390 PF02534 Type IV secretory system Conjugative DNA transfer LA59_RS12400 PF01751 Toprim domain LA59_RS12400 PF01131 DNA topoisomerase LA59_RS12410 PF01168 Alanine racemase, N-terminal domain LA59_RS12435 PF00313 'Cold-shock' DNA-binding domain LA59_RS12445 PF02311 AraC-like ligand binding domain LA59_RS12445 PF12833 Helix-turn-helix domain LA59_RS12455 PF01168 Alanine racemase, N-terminal domain LA59_RS12470 PF06965 Na+/H+ antiporter 1 LA59_RS12475 PF01145 SPFH domain / Band 7 family LA59_RS12480 PF01145 SPFH domain / Band 7 family LA59_RS12480 PF12221 Bacterial membrane protein N terminal LA59_RS12490 PF03741 Integral membrane protein TerC family LA59_RS12500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_RS12500 PF03466 LysR substrate binding domain LA59_RS12505 PF03473 MOSC domain LA59_RS12505 PF03476 MOSC N-terminal beta barrel domain LA59_RS12505 PF00111 2Fe-2S iron-sulfur cluster binding domain LA59_RS12510 PF04794 YdjC-like protein LA59_RS12515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_RS12515 PF03466 LysR substrate binding domain LA59_RS12520 PF00561 alpha/beta hydrolase fold LA59_RS12525 PF07690 Major Facilitator Superfamily LA59_RS12530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_RS12530 PF03466 LysR substrate binding domain LA59_RS12535 PF14031 Putative serine dehydratase domain LA59_RS12535 PF01168 Alanine racemase, N-terminal domain LA59_RS12540 PF02423 Ornithine cyclodeaminase/mu-crystallin family LA59_RS12550 PF18821 Large polyvalent protein-associated domain 7 LA59_RS12550 PF03432 Relaxase/Mobilisation nuclease domain LA59_RS12610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_RS12610 PF00512 His Kinase A (phospho-acceptor) domain LA59_RS12610 PF09308 LuxQ, periplasmic LA59_RS12610 PF00072 Response regulator receiver domain LA59_RS12620 PF04002 RadC-like JAB domain LA59_RS12675 PF00589 Phage integrase family LA59_RS12675 PF02899 Phage integrase, N-terminal SAM-like domain LA59_RS12680 PF00462 Glutaredoxin LA59_RS12685 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LA59_RS12685 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LA59_RS12700 PF00465 Iron-containing alcohol dehydrogenase LA59_RS12700 PF00171 Aldehyde dehydrogenase family LA59_RS12705 PF01914 MarC family integral membrane protein LA59_RS12710 PF00520 Ion transport protein LA59_RS12710 PF00027 Cyclic nucleotide-binding domain LA59_RS12715 PF07963 Prokaryotic N-terminal methylation motif LA59_RS12720 PF02774 Semialdehyde dehydrogenase, dimerisation domain LA59_RS12720 PF01118 Semialdehyde dehydrogenase, NAD binding domain LA59_RS12725 PF03553 Na+/H+ antiporter family LA59_RS12740 PF04245 37-kD nucleoid-associated bacterial protein LA59_RS12745 PF07208 Protein of unknown function (DUF1414) LA59_RS12750 PF11893 Domain of unknown function (DUF3413) LA59_RS12750 PF00884 Sulfatase LA59_RS12760 PF00850 Histone deacetylase domain LA59_RS12765 PF00106 short chain dehydrogenase LA59_RS12775 PF01751 Toprim domain LA59_RS12775 PF01131 DNA topoisomerase LA59_RS12780 PF00881 Nitroreductase family LA59_RS12785 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA59_RS12785 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LA59_RS12790 PF01343 Peptidase family S49 LA59_RS12795 PF17763 Glutaminase/Asparaginase C-terminal domain LA59_RS12795 PF00710 Asparaginase, N-terminal LA59_RS12800 PF07023 Protein of unknown function (DUF1315) LA59_RS12810 PF01641 SelR domain LA59_RS12815 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LA59_RS12815 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LA59_RS12820 PF01263 Aldose 1-epimerase LA59_RS12825 PF01156 Inosine-uridine preferring nucleoside hydrolase LA59_RS12830 PF13426 PAS domain LA59_RS12830 PF08447 PAS fold LA59_RS12830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_RS12835 PF13847 Methyltransferase domain LA59_RS12850 PF02028 BCCT, betaine/carnitine/choline family transporter LA59_RS12855 PF00245 Alkaline phosphatase LA59_RS12865 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LA59_RS12870 PF03992 Antibiotic biosynthesis monooxygenase LA59_RS12875 PF00924 Mechanosensitive ion channel LA59_RS12875 PF05552 Conserved TM helix LA59_RS12880 PF04226 Transglycosylase associated protein LA59_RS12885 PF03692 Putative zinc- or iron-chelating domain LA59_RS12890 PF03692 Putative zinc- or iron-chelating domain LA59_RS12895 PF13309 HTH domain LA59_RS12895 PF08348 YheO-like PAS domain LA59_RS12900 PF03313 Serine dehydratase alpha chain LA59_RS12905 PF01042 Endoribonuclease L-PSP LA59_RS12915 PF00230 Major intrinsic protein LA59_RS12920 PF02132 RecR protein LA59_RS12920 PF13662 Toprim domain LA59_RS12925 PF02575 YbaB/EbfC DNA-binding family LA59_RS12930 PF12169 DNA polymerase III subunits gamma and tau domain III LA59_RS12930 PF12170 DNA polymerase III tau subunit V interacting with alpha LA59_RS12935 PF00156 Phosphoribosyl transferase domain LA59_RS12940 PF04304 Protein of unknown function (DUF454) LA59_RS12945 PF00072 Response regulator receiver domain LA59_RS12950 PF03466 LysR substrate binding domain LA59_RS12950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_RS12955 PF00156 Phosphoribosyl transferase domain LA59_RS12960 PF02674 Colicin V production protein LA59_RS12965 PF05036 Sporulation related domain LA59_RS12970 PF02875 Mur ligase family, glutamate ligase domain LA59_RS12970 PF08245 Mur ligase middle domain LA59_RS12975 PF17848 Acetyl-coA carboxylase zinc finger domain LA59_RS12975 PF01039 Carboxyl transferase domain LA59_RS12980 PF01416 tRNA pseudouridine synthase LA59_RS12990 PF01118 Semialdehyde dehydrogenase, NAD binding domain LA59_RS12990 PF02774 Semialdehyde dehydrogenase, dimerisation domain LA59_RS12995 PF11890 Domain of unknown function (DUF3410) LA59_RS12995 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LA59_RS12995 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LA59_RS13000 PF00109 Beta-ketoacyl synthase, N-terminal domain LA59_RS13000 PF02801 Beta-ketoacyl synthase, C-terminal domain LA59_RS13005 PF05430 S-adenosyl-L-methionine-dependent methyltransferase LA59_RS13005 PF01266 FAD dependent oxidoreductase LA59_RS13015 PF08891 YfcL protein LA59_RS13020 PF04315 Elongation factor P hydroxylase LA59_RS13025 PF03458 UPF0126 domain LA59_RS13030 PF01264 Chorismate synthase LA59_RS13035 PF05175 Methyltransferase small domain LA59_RS13040 PF01713 Smr domain LA59_RS13045 PF00300 Histidine phosphatase superfamily (branch 1) LA59_RS13050 PF16187 Middle or third domain of peptidase_M16 LA59_RS13050 PF05193 Peptidase M16 inactive domain LA59_RS13050 PF00675 Insulinase (Peptidase family M16) LA59_RS13055 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LA59_RS13055 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LA59_RS13055 PF00378 Enoyl-CoA hydratase/isomerase LA59_RS13060 PF02803 Thiolase, C-terminal domain LA59_RS13060 PF00108 Thiolase, N-terminal domain LA59_RS13065 PF04542 Sigma-70 region 2 LA59_RS13065 PF08281 Sigma-70, region 4 LA59_RS13075 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LA59_RS13080 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LA59_RS13085 PF04333 MlaA lipoprotein LA59_RS13090 PF03918 Cytochrome C biogenesis protein LA59_RS13095 PF03918 Cytochrome C biogenesis protein LA59_RS13100 PF08534 Redoxin LA59_RS13105 PF01578 Cytochrome C assembly protein LA59_RS13105 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LA59_RS13110 PF03100 CcmE LA59_RS13120 PF01578 Cytochrome C assembly protein LA59_RS13125 PF03379 CcmB protein LA59_RS13130 PF00005 ABC transporter LA59_RS13140 PF01584 CheW-like domain LA59_RS13150 PF13614 AAA domain LA59_RS13155 PF01339 CheB methylesterase LA59_RS13155 PF00072 Response regulator receiver domain LA59_RS13160 PF00072 Response regulator receiver domain LA59_RS13160 PF01627 Hpt domain LA59_RS13160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_RS13160 PF02895 Signal transducing histidine kinase, homodimeric domain LA59_RS13160 PF01584 CheW-like domain LA59_RS13165 PF04344 Chemotaxis phosphatase, CheZ LA59_RS13170 PF00072 Response regulator receiver domain LA59_RS13175 PF04542 Sigma-70 region 2 LA59_RS13175 PF04539 Sigma-70 region 3 LA59_RS13175 PF04545 Sigma-70, region 4 LA59_RS13180 PF10609 NUBPL iron-transfer P-loop NTPase LA59_RS13185 PF00448 SRP54-type protein, GTPase domain LA59_RS13190 PF00771 FHIPEP family LA59_RS13195 PF01312 FlhB HrpN YscU SpaS Family LA59_RS13200 PF01311 Bacterial export proteins, family 1 LA59_RS13205 PF01313 Bacterial export proteins, family 3 LA59_RS13210 PF00813 FliP family LA59_RS13215 PF04347 Flagellar biosynthesis protein, FliO LA59_RS13220 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LA59_RS13225 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LA59_RS13225 PF02154 Flagellar motor switch protein FliM LA59_RS13250 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LA59_RS13250 PF18269 T3SS EscN ATPase C-terminal domain LA59_RS13260 PF14842 FliG N-terminal domain LA59_RS13260 PF01706 FliG C-terminal domain LA59_RS13260 PF14841 FliG middle domain LA59_RS13265 PF01514 Secretory protein of YscJ/FliF family LA59_RS13265 PF08345 Flagellar M-ring protein C-terminal LA59_RS13270 PF02049 Flagellar hook-basal body complex protein FliE LA59_RS13275 PF00072 Response regulator receiver domain LA59_RS13275 PF02954 Bacterial regulatory protein, Fis family LA59_RS13275 PF00158 Sigma-54 interaction domain LA59_RS13280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_RS13280 PF00512 His Kinase A (phospho-acceptor) domain LA59_RS13280 PF13188 PAS domain LA59_RS13285 PF06490 Flagellar regulatory protein FleQ LA59_RS13285 PF02954 Bacterial regulatory protein, Fis family LA59_RS13285 PF00158 Sigma-54 interaction domain LA59_RS13290 PF02561 Flagellar protein FliS LA59_RS13300 PF02465 Flagellar hook-associated protein 2 N-terminus LA59_RS13300 PF07195 Flagellar hook-associated protein 2 C-terminus LA59_RS13300 PF07196 Flagellin hook IN motif LA59_RS13305 PF03646 FlaG protein LA59_RS13310 PF00669 Bacterial flagellin N-terminal helical region LA59_RS13310 PF00700 Bacterial flagellin C-terminal helical region LA59_RS13310 PF07196 Flagellin hook IN motif LA59_RS13315 PF00669 Bacterial flagellin N-terminal helical region LA59_RS13315 PF00700 Bacterial flagellin C-terminal helical region LA59_RS13315 PF07196 Flagellin hook IN motif LA59_RS13325 PF00669 Bacterial flagellin N-terminal helical region LA59_RS13325 PF00700 Bacterial flagellin C-terminal helical region LA59_RS13325 PF07196 Flagellin hook IN motif LA59_RS13335 PF11975 Family 4 glycosyl hydrolase C-terminal domain LA59_RS13335 PF02056 Family 4 glycosyl hydrolase LA59_RS13340 PF12833 Helix-turn-helix domain LA59_RS13345 PF04261 Dyp-type peroxidase family LA59_RS13350 PF11143 Protein of unknown function (DUF2919) LA59_RS13370 PF03960 ArsC family LA59_RS13375 PF07687 Peptidase dimerisation domain LA59_RS13375 PF01546 Peptidase family M20/M25/M40 LA59_RS13390 PF06804 NlpB/DapX lipoprotein LA59_RS13395 PF00701 Dihydrodipicolinate synthetase family LA59_RS13400 PF01842 ACT domain LA59_RS13405 PF00578 AhpC/TSA family LA59_RS13410 PF01594 AI-2E family transporter LA59_RS13420 PF01435 Peptidase family M48 LA59_RS13420 PF13181 Tetratricopeptide repeat LA59_RS13425 PF03960 ArsC family LA59_RS13430 PF03358 NADPH-dependent FMN reductase LA59_RS13445 PF00860 Permease family LA59_RS13455 PF00586 AIR synthase related protein, N-terminal domain LA59_RS13455 PF02769 AIR synthase related protein, C-terminal domain LA59_RS13460 PF00551 Formyl transferase LA59_RS13465 PF13230 Glutamine amidotransferases class-II LA59_RS13470 PF13580 SIS domain LA59_RS13475 PF09317 Domain of unknown function (DUF1974) LA59_RS13475 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LA59_RS13475 PF02770 Acyl-CoA dehydrogenase, middle domain LA59_RS13475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LA59_RS13495 PF00929 Exonuclease LA59_RS13500 PF00075 RNase H LA59_RS13505 PF08241 Methyltransferase domain LA59_RS13510 PF16123 Hydroxyacylglutathione hydrolase C-terminus LA59_RS13515 PF01476 LysM domain LA59_RS13515 PF01464 Transglycosylase SLT domain LA59_RS13530 PF00543 Nitrogen regulatory protein P-II LA59_RS13535 PF00034 Cytochrome c LA59_RS13540 PF01171 PP-loop family LA59_RS13540 PF11734 TilS substrate C-terminal domain LA59_RS13540 PF09179 TilS substrate binding domain LA59_RS13545 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LA59_RS13550 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LA59_RS13550 PF07733 Bacterial DNA polymerase III alpha NTPase domain LA59_RS13550 PF02811 PHP domain LA59_RS13550 PF01336 OB-fold nucleic acid binding domain LA59_RS13550 PF14579 Helix-hairpin-helix motif LA59_RS13555 PF01351 Ribonuclease HII LA59_RS13560 PF02684 Lipid-A-disaccharide synthetase LA59_RS13565 PF00132 Bacterial transferase hexapeptide (six repeats) LA59_RS13565 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LA59_RS13570 PF07977 FabA-like domain LA59_RS13575 PF00132 Bacterial transferase hexapeptide (six repeats) LA59_RS13575 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LA59_RS13580 PF03938 Outer membrane protein (OmpH-like) LA59_RS13585 PF07244 Surface antigen variable number repeat LA59_RS13585 PF01103 Surface antigen LA59_RS13590 PF02163 Peptidase family M50 LA59_RS13590 PF17820 PDZ domain LA59_RS13595 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LA59_RS13595 PF13288 DXP reductoisomerase C-terminal domain LA59_RS13595 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LA59_RS13605 PF01255 Putative undecaprenyl diphosphate synthase LA59_RS13610 PF01765 Ribosome recycling factor LA59_RS13615 PF00696 Amino acid kinase family LA59_RS13620 PF00889 Elongation factor TS LA59_RS13625 PF00318 Ribosomal protein S2 LA59_RS13630 PF00557 Metallopeptidase family M24 LA59_RS13635 PF01842 ACT domain LA59_RS13635 PF08335 GlnD PII-uridylyltransferase LA59_RS13635 PF01966 HD domain LA59_RS13635 PF01909 Nucleotidyltransferase domain LA59_RS13640 PF11944 Protein of unknown function (DUF3461) LA59_RS13645 PF00849 RNA pseudouridylate synthase LA59_RS13650 PF04287 tRNA pseudouridine synthase C LA59_RS13680 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LA59_RS13690 PF01370 NAD dependent epimerase/dehydratase family LA59_RS13715 PF03806 AbgT putative transporter family LA59_RS13720 PF01197 Ribosomal protein L31 LA59_RS13725 PF01980 tRNA-methyltransferase O LA59_RS13725 PF18389 TrmO C-terminal domain LA59_RS13730 PF03129 Anticodon binding domain LA59_RS13730 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LA59_RS13730 PF04073 Aminoacyl-tRNA editing domain LA59_RS13740 PF06786 Uncharacterised protein family (UPF0253) LA59_RS13750 PF00209 Sodium:neurotransmitter symporter family LA59_RS13755 PF00041 Fibronectin type III domain LA59_RS13755 PF00704 Glycosyl hydrolases family 18 LA59_RS13765 PF03449 Transcription elongation factor, N-terminal LA59_RS13765 PF01272 Transcription elongation factor, GreA/GreB, C-term LA59_RS13770 PF09382 RQC domain LA59_RS13770 PF16124 RecQ zinc-binding LA59_RS13770 PF00570 HRDC domain LA59_RS13770 PF00270 DEAD/DEAH box helicase LA59_RS13770 PF00271 Helicase conserved C-terminal domain LA59_RS13775 PF00817 impB/mucB/samB family LA59_RS13775 PF11799 impB/mucB/samB family C-terminal domain LA59_RS13775 PF11798 IMS family HHH motif LA59_RS13780 PF00990 Diguanylate cyclase, GGDEF domain LA59_RS13780 PF00072 Response regulator receiver domain LA59_RS13790 PF02424 ApbE family LA59_RS13795 PF00970 Oxidoreductase FAD-binding domain LA59_RS13795 PF00175 Oxidoreductase NAD-binding domain LA59_RS13795 PF00111 2Fe-2S iron-sulfur cluster binding domain LA59_RS13800 PF02508 Rnf-Nqr subunit, membrane protein LA59_RS13805 PF02508 Rnf-Nqr subunit, membrane protein LA59_RS13810 PF04205 FMN-binding domain LA59_RS13815 PF03116 NQR2, RnfD, RnfE family LA59_RS13820 PF11973 NQRA C-terminal domain LA59_RS13820 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) LA59_RS13825 PF01722 BolA-like protein LA59_RS13830 PF05175 Methyltransferase small domain LA59_RS13840 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LA59_RS13845 PF07690 Major Facilitator Superfamily LA59_RS13855 PF04542 Sigma-70 region 2 LA59_RS13855 PF04545 Sigma-70, region 4 LA59_RS13870 PF03502 Nucleoside-specific channel-forming protein, Tsx LA59_RS13875 PF02558 Ketopantoate reductase PanE/ApbA LA59_RS13875 PF08546 Ketopantoate reductase PanE/ApbA C terminal LA59_RS13880 PF01965 DJ-1/PfpI family LA59_RS13885 PF00266 Aminotransferase class-V LA59_RS13890 PF02657 Fe-S metabolism associated domain LA59_RS13895 PF00899 ThiF family LA59_RS13900 PF03562 MltA specific insert domain LA59_RS13900 PF06725 3D domain LA59_RS13910 PF00696 Amino acid kinase family LA59_RS13910 PF00583 Acetyltransferase (GNAT) family LA59_RS13920 PF13538 UvrD-like helicase C-terminal domain LA59_RS13925 PF00580 UvrD/REP helicase N-terminal domain LA59_RS13925 PF12705 PD-(D/E)XK nuclease superfamily LA59_RS13925 PF13361 UvrD-like helicase C-terminal domain LA59_RS13930 PF17946 RecC C-terminal domain LA59_RS13935 PF11893 Domain of unknown function (DUF3413) LA59_RS13935 PF00884 Sulfatase LA59_RS13945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_RS13945 PF03466 LysR substrate binding domain LA59_RS13950 PF07130 YebG protein LA59_RS13965 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle LA59_RS13965 PF14602 Hexapeptide repeat of succinyl-transferase LA59_RS13970 PF03009 Glycerophosphoryl diester phosphodiesterase family LA59_RS13975 PF07690 Major Facilitator Superfamily LA59_RS13980 PF00230 Major intrinsic protein LA59_RS13985 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LA59_RS13985 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LA59_RS13990 PF00455 DeoR C terminal sensor domain LA59_RS13990 PF08220 DeoR-like helix-turn-helix domain LA59_RS13995 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LA59_RS13995 PF01266 FAD dependent oxidoreductase LA59_RS14000 PF01464 Transglycosylase SLT domain LA59_RS14000 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain LA59_RS14015 PF01588 Putative tRNA binding domain LA59_RS14020 PF00356 Bacterial regulatory proteins, lacI family LA59_RS14025 PF01263 Aldose 1-epimerase LA59_RS14030 PF00288 GHMP kinases N terminal domain LA59_RS14030 PF08544 GHMP kinases C terminal LA59_RS14030 PF10509 Galactokinase galactose-binding signature LA59_RS14035 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain LA59_RS14035 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain LA59_RS14040 PF16363 GDP-mannose 4,6 dehydratase LA59_RS14045 PF03717 Penicillin-binding Protein dimerisation domain LA59_RS14045 PF00905 Penicillin binding protein transpeptidase domain LA59_RS14055 PF00356 Bacterial regulatory proteins, lacI family LA59_RS14060 PF02929 Beta galactosidase small chain LA59_RS14060 PF16353 Domain of unknown function(DUF4981) LA59_RS14060 PF00703 Glycosyl hydrolases family 2 LA59_RS14060 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LA59_RS14060 PF02837 Glycosyl hydrolases family 2, sugar binding domain LA59_RS14065 PF04074 YhcH/YjgK/YiaL LA59_RS14070 PF13520 Amino acid permease LA59_RS14075 PF03466 LysR substrate binding domain LA59_RS14075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_RS14120 PF00437 Type II/IV secretion system protein LA59_RS14135 PF04972 BON domain LA59_RS14135 PF13629 Pilus formation protein N terminal region LA59_RS14135 PF00263 Bacterial type II and III secretion system protein LA59_RS14160 PF12833 Helix-turn-helix domain LA59_RS14160 PF02805 Metal binding domain of Ada LA59_RS14165 PF00501 AMP-binding enzyme LA59_RS14175 PF03466 LysR substrate binding domain LA59_RS14175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_RS14180 PF03764 Elongation factor G, domain IV LA59_RS14180 PF00009 Elongation factor Tu GTP binding domain LA59_RS14180 PF03144 Elongation factor Tu domain 2 LA59_RS14180 PF00679 Elongation factor G C-terminus LA59_RS14180 PF14492 Elongation Factor G, domain II LA59_RS14185 PF18073 Rubredoxin metal binding domain LA59_RS14195 PF18429 Domain of unknown function (DUF5609) LA59_RS14205 PF01048 Phosphorylase superfamily LA59_RS14210 PF01676 Metalloenzyme superfamily LA59_RS14215 PF00591 Glycosyl transferase family, a/b domain LA59_RS14215 PF02885 Glycosyl transferase family, helical bundle domain LA59_RS14215 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain LA59_RS14220 PF01791 DeoC/LacD family aldolase LA59_RS14225 PF07670 Nucleoside recognition LA59_RS14225 PF01773 Na+ dependent nucleoside transporter N-terminus LA59_RS14225 PF07662 Na+ dependent nucleoside transporter C-terminus LA59_RS14230 PF01026 TatD related DNase LA59_RS14235 PF00009 Elongation factor Tu GTP binding domain LA59_RS14235 PF16658 Class II release factor RF3, C-terminal domain LA59_RS14235 PF03144 Elongation factor Tu domain 2 LA59_RS14240 PF05230 MASE2 domain LA59_RS14240 PF00990 Diguanylate cyclase, GGDEF domain LA59_RS14260 PF13508 Acetyltransferase (GNAT) domain LA59_RS14265 PF02036 SCP-2 sterol transfer family LA59_RS14270 PF00563 EAL domain LA59_RS14270 PF03707 Bacterial signalling protein N terminal repeat LA59_RS14270 PF00990 Diguanylate cyclase, GGDEF domain LA59_RS14275 PF01136 Peptidase family U32 LA59_RS14280 PF01136 Peptidase family U32 LA59_RS14285 PF01554 MatE LA59_RS14295 PF07719 Tetratricopeptide repeat LA59_RS14295 PF13181 Tetratricopeptide repeat LA59_RS14300 PF00013 KH domain LA59_RS14300 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LA59_RS14300 PF00575 S1 RNA binding domain LA59_RS14300 PF03725 3' exoribonuclease family, domain 2 LA59_RS14300 PF01138 3' exoribonuclease family, domain 1 LA59_RS14305 PF00312 Ribosomal protein S15 LA59_RS14310 PF09157 Pseudouridine synthase II TruB, C-terminal LA59_RS14310 PF16198 tRNA pseudouridylate synthase B C-terminal domain LA59_RS14310 PF01509 TruB family pseudouridylate synthase (N terminal domain) LA59_RS14315 PF02033 Ribosome-binding factor A LA59_RS14320 PF11987 Translation-initiation factor 2 LA59_RS14320 PF08364 Bacterial translation initiation factor IF-2 associated region LA59_RS14320 PF00009 Elongation factor Tu GTP binding domain LA59_RS14320 PF04760 Translation initiation factor IF-2, N-terminal region LA59_RS14325 PF08529 NusA N-terminal domain LA59_RS14325 PF13184 NusA-like KH domain LA59_RS14325 PF00575 S1 RNA binding domain LA59_RS14330 PF17384 RimP C-terminal SH3 domain LA59_RS14330 PF02576 RimP N-terminal domain LA59_RS14345 PF03840 Preprotein translocase SecG subunit LA59_RS14350 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LA59_RS14350 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LA59_RS14350 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LA59_RS14350 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LA59_RS14355 PF00809 Pterin binding enzyme LA59_RS14360 PF01434 Peptidase family M41 LA59_RS14360 PF00004 ATPase family associated with various cellular activities (AAA) LA59_RS14360 PF06480 FtsH Extracellular LA59_RS14360 PF17862 AAA+ lid domain LA59_RS14365 PF01728 FtsJ-like methyltransferase LA59_RS14370 PF01985 CRS1 / YhbY (CRM) domain LA59_RS14375 PF03449 Transcription elongation factor, N-terminal LA59_RS14375 PF01272 Transcription elongation factor, GreA/GreB, C-term LA59_RS14380 PF13609 Gram-negative porin LA59_RS14385 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LA59_RS14395 PF00579 tRNA synthetases class I (W and Y) LA59_RS14400 PF01551 Peptidase family M23 LA59_RS14400 PF08525 Opacity-associated protein A N-terminal motif LA59_RS14400 PF01476 LysM domain LA59_RS14405 PF00873 AcrB/AcrD/AcrF family LA59_RS14410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LA59_RS14415 PF01521 Iron-sulphur cluster biosynthesis LA59_RS14420 PF00202 Aminotransferase class-III LA59_RS14425 PF01594 AI-2E family transporter LA59_RS14430 PF05175 Methyltransferase small domain LA59_RS14430 PF08468 Methyltransferase small domain N-terminal LA59_RS14440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_RS14440 PF00512 His Kinase A (phospho-acceptor) domain LA59_RS14440 PF00072 Response regulator receiver domain LA59_RS14440 PF00497 Bacterial extracellular solute-binding proteins, family 3 LA59_RS14445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LA59_RS14450 PF00528 Binding-protein-dependent transport system inner membrane component LA59_RS14455 PF12911 N-terminal TM domain of oligopeptide transport permease C LA59_RS14455 PF00528 Binding-protein-dependent transport system inner membrane component LA59_RS14460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LA59_RS14460 PF00005 ABC transporter LA59_RS14465 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LA59_RS14465 PF00005 ABC transporter LA59_RS14475 PF01869 BadF/BadG/BcrA/BcrD ATPase family LA59_RS14480 PF02838 Glycosyl hydrolase family 20, domain 2 LA59_RS14480 PF00728 Glycosyl hydrolase family 20, catalytic domain LA59_RS14485 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain LA59_RS14485 PF06165 Glycosyltransferase family 36 LA59_RS14490 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LA59_RS14490 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LA59_RS14490 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LA59_RS14490 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LA59_RS14495 PF00005 ABC transporter LA59_RS14495 PF08402 TOBE domain LA59_RS14505 PF13416 Bacterial extracellular solute-binding protein LA59_RS14510 PF00909 Ammonium Transporter Family LA59_RS14515 PF00543 Nitrogen regulatory protein P-II LA59_RS14520 PF06062 Uncharacterised protein family (UPF0231) LA59_RS14525 PF11791 Aconitate B N-terminal domain LA59_RS14525 PF00330 Aconitase family (aconitate hydratase) LA59_RS14525 PF06434 Aconitate hydratase 2 N-terminus LA59_RS14530 PF01734 Patatin-like phospholipase LA59_RS14535 PF00905 Penicillin binding protein transpeptidase domain LA59_RS14535 PF00912 Transglycosylase LA59_RS14535 PF14814 Bifunctional transglycosylase second domain LA59_RS14540 PF00270 DEAD/DEAH box helicase LA59_RS14540 PF08482 ATP-dependent helicase C-terminal LA59_RS14540 PF00271 Helicase conserved C-terminal domain LA59_RS14540 PF04408 Helicase associated domain (HA2) LA59_RS14545 PF03749 Sugar fermentation stimulation protein RE domain LA59_RS14545 PF17746 SfsA N-terminal OB domain LA59_RS14550 PF01258 Prokaryotic dksA/traR C4-type zinc finger LA59_RS14555 PF00749 tRNA synthetases class I (E and Q), catalytic domain LA59_RS14560 PF12626 Polymerase A arginine-rich C-terminus LA59_RS14560 PF12627 Probable RNA and SrmB- binding site of polymerase A LA59_RS14560 PF01743 Poly A polymerase head domain LA59_RS14565 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LA59_RS14570 PF02548 Ketopantoate hydroxymethyltransferase LA59_RS14575 PF02569 Pantoate-beta-alanine ligase LA59_RS14580 PF03279 Bacterial lipid A biosynthesis acyltransferase LA59_RS14585 PF01061 ABC-2 type transporter LA59_RS14590 PF00005 ABC transporter LA59_RS14595 PF00916 Sulfate permease family LA59_RS14595 PF01740 STAS domain LA59_RS14600 PF00484 Carbonic anhydrase LA59_RS14605 PF00156 Phosphoribosyl transferase domain LA59_RS14610 PF00440 Bacterial regulatory proteins, tetR family LA59_RS14615 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LA59_RS14615 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA59_RS14620 PF02817 e3 binding domain LA59_RS14620 PF00364 Biotin-requiring enzyme LA59_RS14620 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LA59_RS14625 PF00456 Transketolase, thiamine diphosphate binding domain LA59_RS14625 PF17831 Pyruvate dehydrogenase E1 component middle domain LA59_RS14630 PF00392 Bacterial regulatory proteins, gntR family LA59_RS14630 PF07729 FCD domain LA59_RS14635 PF01510 N-acetylmuramoyl-L-alanine amidase LA59_RS14640 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LA59_RS14640 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LA59_RS14650 PF00114 Pilin (bacterial filament) LA59_RS14650 PF07963 Prokaryotic N-terminal methylation motif LA59_RS14655 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LA59_RS14655 PF00437 Type II/IV secretion system protein LA59_RS14660 PF00482 Type II secretion system (T2SS), protein F LA59_RS14665 PF01478 Type IV leader peptidase family LA59_RS14665 PF06750 Bacterial Peptidase A24 N-terminal domain LA59_RS14670 PF01121 Dephospho-CoA kinase LA59_RS14675 PF07072 Cell division protein LA59_RS14680 PF03884 DNA gyrase inhibitor YacG LA59_RS14685 PF01245 Ribosomal protein L19 LA59_RS14690 PF01746 tRNA (Guanine-1)-methyltransferase LA59_RS14695 PF01782 RimM N-terminal domain LA59_RS14695 PF05239 PRC-barrel domain LA59_RS14700 PF00886 Ribosomal protein S16 LA59_RS14705 PF02978 Signal peptide binding domain LA59_RS14705 PF02881 SRP54-type protein, helical bundle domain LA59_RS14705 PF00448 SRP54-type protein, GTPase domain LA59_RS14710 PF01578 Cytochrome C assembly protein LA59_RS14715 PF03471 Transporter associated domain LA59_RS14715 PF01595 Cyclin M transmembrane N-terminal domain LA59_RS14715 PF00571 CBS domain LA59_RS14720 PF02664 S-Ribosylhomocysteinase (LuxS) LA59_RS14730 PF04262 Glutamate-cysteine ligase LA59_RS14735 PF05193 Peptidase M16 inactive domain LA59_RS14735 PF00675 Insulinase (Peptidase family M16) LA59_RS14740 PF09335 SNARE associated Golgi protein LA59_RS14745 PF08240 Alcohol dehydrogenase GroES-like domain LA59_RS14745 PF00107 Zinc-binding dehydrogenase LA59_RS14750 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit LA59_RS14755 PF00364 Biotin-requiring enzyme LA59_RS14755 PF00682 HMGL-like LA59_RS14755 PF02436 Conserved carboxylase domain LA59_RS14760 PF04277 Oxaloacetate decarboxylase, gamma chain LA59_RS14815 PF02599 Global regulator protein family LA59_RS14820 PF00696 Amino acid kinase family LA59_RS14820 PF01842 ACT domain LA59_RS14820 PF13840 ACT domain LA59_RS14825 PF02272 DHHA1 domain LA59_RS14825 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LA59_RS14825 PF01411 tRNA synthetases class II (A) LA59_RS14830 PF02631 RecX family LA59_RS14835 PF00154 recA bacterial DNA recombination protein LA59_RS14840 PF02464 Competence-damaged protein LA59_RS14845 PF05190 MutS family domain IV LA59_RS14845 PF05192 MutS domain III LA59_RS14845 PF05188 MutS domain II LA59_RS14845 PF00488 MutS domain V LA59_RS14845 PF01624 MutS domain I LA59_RS14850 PF04539 Sigma-70 region 3 LA59_RS14850 PF04545 Sigma-70, region 4 LA59_RS14850 PF04542 Sigma-70 region 2 LA59_RS14850 PF00140 Sigma-70 factor, region 1.2 LA59_RS14855 PF01476 LysM domain LA59_RS14855 PF01551 Peptidase family M23 LA59_RS14865 PF01975 Survival protein SurE LA59_RS14870 PF01142 tRNA pseudouridine synthase D (TruD) LA59_RS14875 PF02542 YgbB family LA59_RS14880 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LA59_RS14885 PF04977 Septum formation initiator LA59_RS14890 PF03952 Enolase, N-terminal domain LA59_RS14890 PF00113 Enolase, C-terminal TIM barrel domain LA59_RS14895 PF06418 CTP synthase N-terminus LA59_RS14895 PF00117 Glutamine amidotransferase class-I LA59_RS14900 PF03819 MazG nucleotide pyrophosphohydrolase domain LA59_RS14905 PF13291 ACT domain LA59_RS14905 PF02824 TGS domain LA59_RS14905 PF04607 Region found in RelA / SpoT proteins LA59_RS14910 PF05958 tRNA (Uracil-5-)-methyltransferase LA59_RS14910 PF01938 TRAM domain LA59_RS14915 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LA59_RS14915 PF00072 Response regulator receiver domain LA59_RS14915 PF01627 Hpt domain LA59_RS14915 PF00512 His Kinase A (phospho-acceptor) domain LA59_RS14915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_RS14915 PF00672 HAMP domain LA59_RS14920 PF01648 4'-phosphopantetheinyl transferase superfamily LA59_RS14925 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LA59_RS14930 PF11967 Recombination protein O N terminal LA59_RS14930 PF02565 Recombination protein O C terminal LA59_RS14935 PF07650 KH domain LA59_RS14935 PF01926 50S ribosome-binding GTPase LA59_RS14940 PF00035 Double-stranded RNA binding motif LA59_RS14940 PF14622 Ribonuclease-III-like LA59_RS14945 PF10502 Signal peptidase, peptidase S26 LA59_RS14950 PF03144 Elongation factor Tu domain 2 LA59_RS14950 PF00009 Elongation factor Tu GTP binding domain LA59_RS14950 PF00679 Elongation factor G C-terminus LA59_RS14950 PF06421 GTP-binding protein LepA C-terminus LA59_RS14960 PF03888 MucB/RseB N-terminal domain LA59_RS14960 PF17188 MucB/RseB C-terminal domain LA59_RS14965 PF03872 Anti sigma-E protein RseA, N-terminal domain LA59_RS14965 PF03873 Anti sigma-E protein RseA, C-terminal domain LA59_RS14970 PF08281 Sigma-70, region 4 LA59_RS14970 PF04542 Sigma-70 region 2 LA59_RS14975 PF00890 FAD binding domain LA59_RS14975 PF02910 Fumarate reductase flavoprotein C-term LA59_RS14985 PF03937 Flavinator of succinate dehydrogenase LA59_RS15005 PF01494 FAD binding domain LA59_RS15010 PF01494 FAD binding domain LA59_RS15015 PF03695 Uncharacterised protein family (UPF0149) LA59_RS15020 PF05164 Cell division protein ZapA LA59_RS15030 PF01812 5-formyltetrahydrofolate cyclo-ligase family LA59_RS15035 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LA59_RS15040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LA59_RS15040 PF01842 ACT domain LA59_RS15040 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LA59_RS15045 PF04402 Protein of unknown function (DUF541) LA59_RS15050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_RS15050 PF03466 LysR substrate binding domain LA59_RS15055 PF01810 LysE type translocator LA59_RS15065 PF05552 Conserved TM helix LA59_RS15065 PF00924 Mechanosensitive ion channel LA59_RS15070 PF01116 Fructose-bisphosphate aldolase class-II LA59_RS15075 PF00162 Phosphoglycerate kinase LA59_RS15080 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LA59_RS15080 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LA59_RS15090 PF02780 Transketolase, C-terminal domain LA59_RS15090 PF00456 Transketolase, thiamine diphosphate binding domain LA59_RS15090 PF02779 Transketolase, pyrimidine binding domain LA59_RS15095 PF00438 S-adenosylmethionine synthetase, N-terminal domain LA59_RS15095 PF02772 S-adenosylmethionine synthetase, central domain LA59_RS15095 PF02773 S-adenosylmethionine synthetase, C-terminal domain LA59_RS15105 PF10263 SprT-like family LA59_RS15105 PF17283 SprT-like zinc ribbon domain LA59_RS15110 PF04231 Endonuclease I LA59_RS15115 PF04452 RNA methyltransferase LA59_RS15120 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LA59_RS15120 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LA59_RS15125 PF02622 Uncharacterized ACR, COG1678 LA59_RS15130 PF03652 Holliday junction resolvase LA59_RS15135 PF00437 Type II/IV secretion system protein LA59_RS15140 PF00437 Type II/IV secretion system protein LA59_RS15145 PF01168 Alanine racemase, N-terminal domain LA59_RS15150 PF03807 NADP oxidoreductase coenzyme F420-dependent LA59_RS15150 PF14748 Pyrroline-5-carboxylate reductase dimerisation LA59_RS15155 PF02325 YGGT family LA59_RS15160 PF02594 Uncharacterised ACR, YggU family COG1872 LA59_RS15170 PF01725 Ham1 family LA59_RS15175 PF06969 HemN C-terminal domain LA59_RS15175 PF04055 Radical SAM superfamily LA59_RS15180 PF04960 Glutaminase LA59_RS15185 PF02086 D12 class N6 adenine-specific DNA methyltransferase LA59_RS15190 PF02390 Putative methyltransferase LA59_RS15195 PF00730 HhH-GPD superfamily base excision DNA repair protein LA59_RS15195 PF00633 Helix-hairpin-helix motif LA59_RS15195 PF14815 NUDIX domain LA59_RS15200 PF04362 Bacterial Fe(2+) trafficking LA59_RS15205 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain LA59_RS15205 PF01464 Transglycosylase SLT domain LA59_RS15245 PF17200 Single Cache domain 2 LA59_RS15245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_RS15245 PF00672 HAMP domain LA59_RS15275 PF00171 Aldehyde dehydrogenase family LA59_RS15320 PF00072 Response regulator receiver domain LA59_RS15325 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LA59_RS15325 PF00356 Bacterial regulatory proteins, lacI family LA59_RS15330 PF04794 YdjC-like protein LA59_RS15335 PF11975 Family 4 glycosyl hydrolase C-terminal domain LA59_RS15335 PF02056 Family 4 glycosyl hydrolase LA59_RS15340 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LA59_RS15345 PF02378 Phosphotransferase system, EIIC LA59_RS15350 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LA59_RS15370 PF00106 short chain dehydrogenase LA59_RS15380 PF03739 Lipopolysaccharide export system permease LptF/LptG LA59_RS15385 PF03739 Lipopolysaccharide export system permease LptF/LptG LA59_RS15390 PF00883 Cytosol aminopeptidase family, catalytic domain LA59_RS15390 PF02789 Cytosol aminopeptidase family, N-terminal domain LA59_RS15395 PF04364 DNA polymerase III chi subunit, HolC LA59_RS15400 PF08264 Anticodon-binding domain of tRNA LA59_RS15400 PF10458 Valyl tRNA synthetase tRNA binding arm LA59_RS15400 PF00133 tRNA synthetases class I (I, L, M and V) LA59_RS15410 PF00583 Acetyltransferase (GNAT) family LA59_RS15420 PF06877 Regulator of ribonuclease activity B LA59_RS15430 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LA59_RS15430 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LA59_RS15435 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LA59_RS15435 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LA59_RS15440 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain LA59_RS15440 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain LA59_RS15445 PF01042 Endoribonuclease L-PSP LA59_RS15450 PF01553 Acyltransferase LA59_RS15455 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LA59_RS15460 PF01722 BolA-like protein LA59_RS15470 PF05494 MlaC protein LA59_RS15475 PF02470 MlaD protein LA59_RS15480 PF02405 Permease MlaE LA59_RS15485 PF00005 ABC transporter LA59_RS15490 PF01699 Sodium/calcium exchanger protein LA59_RS15495 PF01380 SIS domain LA59_RS15495 PF00571 CBS domain LA59_RS15505 PF03968 OstA-like protein LA59_RS15510 PF00005 ABC transporter LA59_RS15510 PF12399 Branched-chain amino acid ATP-binding cassette transporter LA59_RS15515 PF04552 Sigma-54, DNA binding domain LA59_RS15515 PF04963 Sigma-54 factor, core binding domain LA59_RS15515 PF00309 Sigma-54 factor, Activator interacting domain (AID) LA59_RS15520 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LA59_RS15525 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LA59_RS15530 PF03668 P-loop ATPase protein family LA59_RS15535 PF00381 PTS HPr component phosphorylation site LA59_RS15540 PF00571 CBS domain LA59_RS15540 PF01769 Divalent cation transporter LA59_RS15540 PF03448 MgtE intracellular N domain LA59_RS15545 PF01523 Putative modulator of DNA gyrase LA59_RS15550 PF04751 Protein of unknown function (DUF615) LA59_RS15555 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LA59_RS15555 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LA59_RS15560 PF00849 RNA pseudouridylate synthase LA59_RS15570 PF12137 RNA polymerase recycling family C-terminal LA59_RS15570 PF00176 SNF2 family N-terminal domain LA59_RS15570 PF18339 RapA N-terminal Tudor like domain 1 LA59_RS15570 PF18337 RapA N-terminal Tudor like domain LA59_RS15570 PF00271 Helicase conserved C-terminal domain LA59_RS15575 PF02562 PhoH-like protein LA59_RS15575 PF13638 PIN domain LA59_RS15580 PF01523 Putative modulator of DNA gyrase LA59_RS15585 PF00795 Carbon-nitrogen hydrolase LA59_RS15590 PF13116 Protein of unknown function LA59_RS15590 PF13502 AsmA-like C-terminal region LA59_RS15595 PF00575 S1 RNA binding domain LA59_RS15595 PF10150 Ribonuclease E/G family LA59_RS15600 PF02545 Maf-like protein LA59_RS15605 PF04093 rod shape-determining protein MreD LA59_RS15610 PF04085 rod shape-determining protein MreC LA59_RS15650 PF07963 Prokaryotic N-terminal methylation motif LA59_RS15660 PF00482 Type II secretion system (T2SS), protein F LA59_RS15665 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LA59_RS15665 PF00437 Type II/IV secretion system protein LA59_RS15675 PF01471 Putative peptidoglycan binding domain LA59_RS15675 PF13401 AAA domain LA59_RS15680 PF03958 Bacterial type II/III secretion system short domain LA59_RS15680 PF00263 Bacterial type II and III secretion system protein LA59_RS15700 PF00990 Diguanylate cyclase, GGDEF domain LA59_RS15700 PF00563 EAL domain LA59_RS15700 PF17157 Gammaproteobacterial periplasmic sensor domain LA59_RS15705 PF00436 Single-strand binding protein family LA59_RS15710 PF00196 Bacterial regulatory proteins, luxR family LA59_RS15715 PF00483 Nucleotidyl transferase LA59_RS15720 PF17755 UvrA DNA-binding domain LA59_RS15720 PF00005 ABC transporter LA59_RS15720 PF17760 UvrA interaction domain LA59_RS15730 PF00266 Aminotransferase class-V LA59_RS15735 PF01842 ACT domain LA59_RS15735 PF00696 Amino acid kinase family LA59_RS15740 PF00809 Pterin binding enzyme LA59_RS15740 PF02965 Vitamin B12 dependent methionine synthase, activation domain LA59_RS15740 PF02310 B12 binding domain LA59_RS15740 PF02607 B12 binding domain LA59_RS15740 PF02574 Homocysteine S-methyltransferase LA59_RS15745 PF00999 Sodium/hydrogen exchanger family LA59_RS15795 PF01507 Phosphoadenosine phosphosulfate reductase family LA59_RS15800 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LA59_RS15800 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LA59_RS15805 PF00175 Oxidoreductase NAD-binding domain LA59_RS15805 PF00258 Flavodoxin LA59_RS15805 PF00667 FAD binding domain LA59_RS15825 PF01207 Dihydrouridine synthase (Dus) LA59_RS15915 PF05840 Bacteriophage replication gene A protein (GPA) LA59_RS15940 PF01475 Ferric uptake regulator family LA59_RS15950 PF00342 Phosphoglucose isomerase LA59_RS15955 PF01894 Uncharacterised protein family UPF0047 LA59_RS15965 PF00842 Alanine racemase, C-terminal domain LA59_RS15965 PF01168 Alanine racemase, N-terminal domain LA59_RS15970 PF03796 DnaB-like helicase C terminal domain LA59_RS15970 PF00772 DnaB-like helicase N terminal domain LA59_RS15980 PF03948 Ribosomal protein L9, C-terminal domain LA59_RS15980 PF01281 Ribosomal protein L9, N-terminal domain LA59_RS15985 PF01084 Ribosomal protein S18 LA59_RS15990 PF01250 Ribosomal protein S6 LA59_RS15995 PF00834 Ribulose-phosphate 3 epimerase family LA59_RS16000 PF02086 D12 class N6 adenine-specific DNA methyltransferase LA59_RS16010 PF01761 3-dehydroquinate synthase LA59_RS16015 PF01202 Shikimate kinase LA59_RS16020 PF03958 Bacterial type II/III secretion system short domain LA59_RS16020 PF11741 AMIN domain LA59_RS16020 PF00263 Bacterial type II and III secretion system protein LA59_RS16020 PF07660 Secretin and TonB N terminus short domain LA59_RS16025 PF04351 Pilus assembly protein, PilP LA59_RS16045 PF00905 Penicillin binding protein transpeptidase domain LA59_RS16045 PF00912 Transglycosylase LA59_RS16045 PF17092 Penicillin-binding protein OB-like domain LA59_RS16050 PF03466 LysR substrate binding domain LA59_RS16050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_RS16055 PF00462 Glutaredoxin LA59_RS16055 PF08534 Redoxin LA59_RS16060 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA59_RS16060 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LA59_RS16070 PF14698 Argininosuccinate lyase C-terminal LA59_RS16070 PF00583 Acetyltransferase (GNAT) family LA59_RS16070 PF00206 Lyase LA59_RS16075 PF00764 Arginosuccinate synthase LA59_RS16080 PF00696 Amino acid kinase family LA59_RS16085 PF01118 Semialdehyde dehydrogenase, NAD binding domain LA59_RS16085 PF02774 Semialdehyde dehydrogenase, dimerisation domain LA59_RS16090 PF01546 Peptidase family M20/M25/M40 LA59_RS16090 PF07687 Peptidase dimerisation domain LA59_RS16095 PF00311 Phosphoenolpyruvate carboxylase LA59_RS16105 PF02219 Methylenetetrahydrofolate reductase LA59_RS16110 PF00696 Amino acid kinase family LA59_RS16110 PF03447 Homoserine dehydrogenase, NAD binding domain LA59_RS16110 PF00742 Homoserine dehydrogenase LA59_RS16115 PF01053 Cys/Met metabolism PLP-dependent enzyme LA59_RS16120 PF01340 Met Apo-repressor, MetJ LA59_RS16125 PF00390 Malic enzyme, N-terminal domain LA59_RS16125 PF03949 Malic enzyme, NAD binding domain LA59_RS16130 PF00210 Ferritin-like domain LA59_RS16135 PF04324 BFD-like [2Fe-2S] binding domain LA59_RS16140 PF03143 Elongation factor Tu C-terminal domain LA59_RS16140 PF03144 Elongation factor Tu domain 2 LA59_RS16140 PF00009 Elongation factor Tu GTP binding domain LA59_RS16145 PF03144 Elongation factor Tu domain 2 LA59_RS16145 PF14492 Elongation Factor G, domain II LA59_RS16145 PF03764 Elongation factor G, domain IV LA59_RS16145 PF00679 Elongation factor G C-terminus LA59_RS16145 PF00009 Elongation factor Tu GTP binding domain LA59_RS16150 PF00177 Ribosomal protein S7p/S5e LA59_RS16155 PF00164 Ribosomal protein S12/S23 LA59_RS16160 PF04077 DsrH like protein LA59_RS16165 PF02635 DsrE/DsrF-like family LA59_RS16170 PF02635 DsrE/DsrF-like family LA59_RS16175 PF08348 YheO-like PAS domain LA59_RS16175 PF13309 HTH domain LA59_RS16180 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LA59_RS16180 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LA59_RS16190 PF04102 SlyX LA59_RS16195 PF01112 Asparaginase LA59_RS16200 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LA59_RS16210 PF02254 TrkA-N domain LA59_RS16210 PF00999 Sodium/hydrogen exchanger family LA59_RS16215 PF02525 Flavodoxin-like fold LA59_RS16220 PF00005 ABC transporter LA59_RS16220 PF12848 ABC transporter LA59_RS16230 PF00561 alpha/beta hydrolase fold LA59_RS16235 PF06794 Uncharacterised protein family (UPF0270) LA59_RS16240 PF00485 Phosphoribulokinase / Uridine kinase family LA59_RS16245 PF13545 Crp-like helix-turn-helix domain LA59_RS16245 PF00027 Cyclic nucleotide-binding domain LA59_RS16255 PF00171 Aldehyde dehydrogenase family LA59_RS16260 PF04958 Arginine N-succinyltransferase beta subunit LA59_RS16265 PF00202 Aminotransferase class-III LA59_RS16270 PF00117 Glutamine amidotransferase class-I LA59_RS16280 PF00267 Gram-negative porin LA59_RS16290 PF00579 tRNA synthetases class I (W and Y) LA59_RS16295 PF13419 Haloacid dehalogenase-like hydrolase LA59_RS16300 PF08032 RNA 2'-O ribose methyltransferase substrate binding LA59_RS16300 PF00588 SpoU rRNA Methylase family LA59_RS16305 PF17876 Cold shock domain LA59_RS16305 PF00575 S1 RNA binding domain LA59_RS16305 PF00773 RNB domain LA59_RS16305 PF08206 Ribonuclease B OB domain LA59_RS16305 PF08461 Ribonuclease R winged-helix domain LA59_RS16310 PF02082 Transcriptional regulator LA59_RS16315 PF00175 Oxidoreductase NAD-binding domain LA59_RS16315 PF00042 Globin LA59_RS16315 PF00970 Oxidoreductase FAD-binding domain LA59_RS16320 PF08238 Sel1 repeat LA59_RS16325 PF00709 Adenylosuccinate synthetase LA59_RS16330 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) LA59_RS16335 PF01145 SPFH domain / Band 7 family LA59_RS16340 PF12221 Bacterial membrane protein N terminal LA59_RS16340 PF01145 SPFH domain / Band 7 family LA59_RS16345 PF01926 50S ribosome-binding GTPase LA59_RS16345 PF13167 GTP-binding GTPase N-terminal LA59_RS16345 PF16360 GTP-binding GTPase Middle Region LA59_RS16350 PF17209 Hfq protein LA59_RS16360 PF01119 DNA mismatch repair protein, C-terminal domain LA59_RS16360 PF08676 MutL C terminal dimerisation domain LA59_RS16365 PF01520 N-acetylmuramoyl-L-alanine amidase LA59_RS16370 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LA59_RS16375 PF08331 Domain of unknown function (DUF1730) LA59_RS16440 PF00929 Exonuclease LA59_RS16445 PF03193 RsgA GTPase LA59_RS16450 PF02666 Phosphatidylserine decarboxylase LA59_RS16455 PF00939 Sodium:sulfate symporter transmembrane region LA59_RS16460 PF02743 Cache domain LA59_RS16460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_RS16460 PF00672 HAMP domain LA59_RS16470 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LA59_RS16470 PF01676 Metalloenzyme superfamily LA59_RS16475 PF00581 Rhodanese-like domain LA59_RS16480 PF02556 Preprotein translocase subunit SecB LA59_RS16485 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LA59_RS16485 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LA59_RS16490 PF00132 Bacterial transferase hexapeptide (six repeats) LA59_RS16490 PF06426 Serine acetyltransferase, N-terminal LA59_RS16495 PF01551 Peptidase family M23 LA59_RS16505 PF00440 Bacterial regulatory proteins, tetR family LA59_RS16505 PF08360 QacR-like protein, C-terminal region LA59_RS16515 PF00152 tRNA synthetases class II (D, K and N) LA59_RS16520 PF02910 Fumarate reductase flavoprotein C-term LA59_RS16520 PF00890 FAD binding domain LA59_RS16525 PF13085 2Fe-2S iron-sulfur cluster binding domain LA59_RS16525 PF13183 4Fe-4S dicluster domain LA59_RS16530 PF02300 Fumarate reductase subunit C LA59_RS16535 PF02313 Fumarate reductase subunit D LA59_RS16550 PF01132 Elongation factor P (EF-P) OB domain LA59_RS16550 PF08207 Elongation factor P (EF-P) KOW-like domain LA59_RS16550 PF09285 Elongation factor P, C-terminal LA59_RS16555 PF04055 Radical SAM superfamily LA59_RS16560 PF02308 MgtC family LA59_RS16570 PF00118 TCP-1/cpn60 chaperonin family LA59_RS16575 PF00166 Chaperonin 10 Kd subunit LA59_RS16580 PF01554 MatE LA59_RS16585 PF00365 Phosphofructokinase LA59_RS16590 PF16916 Dimerisation domain of Zinc Transporter LA59_RS16590 PF01545 Cation efflux family LA59_RS16595 PF07813 LTXXQ motif family protein LA59_RS16600 PF00072 Response regulator receiver domain LA59_RS16600 PF00486 Transcriptional regulatory protein, C terminal LA59_RS16605 PF00672 HAMP domain LA59_RS16605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_RS16605 PF00512 His Kinase A (phospho-acceptor) domain LA59_RS16605 PF16527 Two-component sensor protein CpxA, periplasmic domain LA59_RS16610 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LA59_RS16610 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LA59_RS16615 PF00588 SpoU rRNA Methylase family LA59_RS16620 PF04186 FxsA cytoplasmic membrane protein LA59_RS16625 PF10415 Fumarase C C-terminus LA59_RS16625 PF00206 Lyase LA59_RS16630 PF03605 Anaerobic c4-dicarboxylate membrane transporter LA59_RS16635 PF02683 Cytochrome C biogenesis protein transmembrane region LA59_RS16635 PF11412 Disulphide bond corrector protein DsbC LA59_RS16640 PF00072 Response regulator receiver domain LA59_RS16640 PF00196 Bacterial regulatory proteins, luxR family LA59_RS16645 PF01914 MarC family integral membrane protein LA59_RS16655 PF00474 Sodium:solute symporter family LA59_RS16670 PF00206 Lyase LA59_RS16670 PF10415 Fumarase C C-terminus LA59_RS16675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_RS16675 PF00512 His Kinase A (phospho-acceptor) domain LA59_RS16675 PF01627 Hpt domain LA59_RS16675 PF00072 Response regulator receiver domain LA59_RS16675 PF00672 HAMP domain LA59_RS16680 PF12832 MFS_1 like family LA59_RS16695 PF13193 AMP-binding enzyme C-terminal domain LA59_RS16695 PF00501 AMP-binding enzyme LA59_RS16695 PF16177 Acetyl-coenzyme A synthetase N-terminus LA59_RS16700 PF01220 Dehydroquinase class II LA59_RS16705 PF00364 Biotin-requiring enzyme LA59_RS16710 PF00289 Biotin carboxylase, N-terminal domain LA59_RS16710 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LA59_RS16710 PF02785 Biotin carboxylase C-terminal domain LA59_RS16720 PF01207 Dihydrouridine synthase (Dus) LA59_RS16725 PF02954 Bacterial regulatory protein, Fis family LA59_RS16730 PF08448 PAS fold LA59_RS16730 PF00990 Diguanylate cyclase, GGDEF domain LA59_RS16880 PF00293 NUDIX domain LA59_RS16880 PF09297 NADH pyrophosphatase zinc ribbon domain LA59_RS17075 PF04345 Chorismate lyase LA59_RS17175 PF10442 FIST C domain LA59_RS17175 PF00990 Diguanylate cyclase, GGDEF domain LA59_RS17175 PF08495 FIST N domain LA59_RS17175 PF00563 EAL domain LA59_RS17450 PF01218 Coproporphyrinogen III oxidase LA59_RS17565 PF00920 Dehydratase family LA59_RS17670 PF00528 Binding-protein-dependent transport system inner membrane component LA59_RS17740 PF02092 Glycyl-tRNA synthetase beta subunit LA59_RS17740 PF05746 DALR anticodon binding domain LA59_RS17890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LA59_RS17890 PF00005 ABC transporter LA59_RS17995 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LA59_RS17995 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA59_RS18260 PF00437 Type II/IV secretion system protein LA59_RS18635 PF03102 NeuB family LA59_RS18635 PF08666 SAF domain LA59_RS18740 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LA59_RS18910 PF00344 SecY translocase LA59_RS18970 PF00149 Calcineurin-like phosphoesterase LA59_RS18970 PF02872 5'-nucleotidase, C-terminal domain LA59_RS19190 PF03968 OstA-like protein LA59_RS19190 PF04453 LPS transport system D LA59_RS19395 PF02321 Outer membrane efflux protein LA59_RS19590 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LA59_RS19590 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LA59_RS19590 PF02142 MGS-like domain LA59_RS19630 PF03458 UPF0126 domain LA59_RS19675 PF00310 Glutamine amidotransferases class-II LA59_RS19675 PF04898 Glutamate synthase central domain LA59_RS19675 PF01645 Conserved region in glutamate synthase LA59_RS19675 PF01493 GXGXG motif LA59_RS19680 PF00310 Glutamine amidotransferases class-II LA59_RS19680 PF04898 Glutamate synthase central domain LA59_RS19680 PF01493 GXGXG motif LA59_RS19680 PF01645 Conserved region in glutamate synthase LA59_RS20095 PF01464 Transglycosylase SLT domain LA59_RS20095 PF00497 Bacterial extracellular solute-binding proteins, family 3 LA59_RS20310 PF02355 Protein export membrane protein LA59_RS20310 PF13721 SecD export protein N-terminal TM region LA59_RS20310 PF07549 SecD/SecF GG Motif LA59_RS20410 PF02540 NAD synthase LA59_RS20410 PF00958 GMP synthase C terminal domain LA59_RS20410 PF00117 Glutamine amidotransferase class-I LA59_RS20745 PF00586 AIR synthase related protein, N-terminal domain LA59_RS20745 PF02769 AIR synthase related protein, C-terminal domain LA59_RS20760 PF02779 Transketolase, pyrimidine binding domain LA59_RS20760 PF02780 Transketolase, C-terminal domain LA59_RS20760 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LA59_RS20940 PF01098 Cell cycle protein LA59_RS20985 PF00795 Carbon-nitrogen hydrolase LA59_RS21090 PF00149 Calcineurin-like phosphoesterase LA59_RS21090 PF02872 5'-nucleotidase, C-terminal domain LA59_RS21110 PF01713 Smr domain LA59_RS21175 PF00749 tRNA synthetases class I (E and Q), catalytic domain LA59_RS21325 PF00291 Pyridoxal-phosphate dependent enzyme LA59_RS21530 PF00549 CoA-ligase LA59_RS21530 PF08442 ATP-grasp domain LA59_RS21545 PF00950 ABC 3 transport family LA59_RS21665 PF00145 C-5 cytosine-specific DNA methylase LA59_RS22095 PF13378 Enolase C-terminal domain-like LA59_RS22140 PF03601 Conserved hypothetical protein 698 LA59_RS22155 PF07690 Major Facilitator Superfamily LA59_RS22495 PF02901 Pyruvate formate lyase-like LA59_RS22495 PF01228 Glycine radical LA59_RS22625 PF01396 Topoisomerase DNA binding C4 zinc finger LA59_RS22625 PF01751 Toprim domain LA59_RS22625 PF01131 DNA topoisomerase LA59_RS22625 PF08272 Topoisomerase I zinc-ribbon-like LA59_RS22755 PF02938 GAD domain LA59_RS22755 PF00152 tRNA synthetases class II (D, K and N) LA59_RS22755 PF01336 OB-fold nucleic acid binding domain LA59_RS22810 PF07676 WD40-like Beta Propeller Repeat LA59_RS22810 PF04052 TolB amino-terminal domain LA59_RS22835 PF00381 PTS HPr component phosphorylation site LA59_RS22835 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LA59_RS22835 PF02896 PEP-utilising enzyme, TIM barrel domain LA59_RS22835 PF00391 PEP-utilising enzyme, mobile domain LA59_RS22835 PF05524 PEP-utilising enzyme, N-terminal LA59_RS23065 PF01312 FlhB HrpN YscU SpaS Family LA59_RS23160 PF13411 MerR HTH family regulatory protein LA59_RS23255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LA59_RS23305 PF00873 AcrB/AcrD/AcrF family LA59_RS23310 PF00873 AcrB/AcrD/AcrF family LA59_RS23445 PF04151 Bacterial pre-peptidase C-terminal domain LA59_RS23445 PF08453 Peptidase family M9 N-terminal LA59_RS23445 PF01752 Collagenase LA59_RS23595 PF03553 Na+/H+ antiporter family LA59_RS23600 PF03553 Na+/H+ antiporter family LA59_RS23775 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LA59_RS23810 PF00873 AcrB/AcrD/AcrF family LA59_RS23905 PF00528 Binding-protein-dependent transport system inner membrane component LA59_RS24040 PF00474 Sodium:solute symporter family LA59_RS24260 PF03466 LysR substrate binding domain LA59_RS24260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_RS24410 PF01966 HD domain LA59_RS24410 PF11871 Domain of unknown function (DUF3391) LA59_RS24460 PF01966 HD domain LA59_RS24985 PF13185 GAF domain LA59_RS24985 PF00990 Diguanylate cyclase, GGDEF domain LA59_RS25690 PF00132 Bacterial transferase hexapeptide (six repeats) LA59_RS25690 PF12464 Maltose acetyltransferase LA59_RS25855 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LA59_RS25855 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LA59_RS25885 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LA59_RS25885 PF17203 Single cache domain 3 LA59_RS25885 PF00989 PAS fold LA59_RS25885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_RS26415 PF12561 ToxR activated gene A lipoprotein domain LA59_RS26415 PF00041 Fibronectin type III domain LA59_RS26635 PF00929 Exonuclease LA59_RS26635 PF08411 Exonuclease C-terminal