locus-tag class description AL538_RS00010 PF00158 Sigma-54 interaction domain AL538_RS00010 PF02954 Bacterial regulatory protein, Fis family AL538_RS00010 PF00072 Response regulator receiver domain AL538_RS00025 PF02563 Polysaccharide biosynthesis/export protein AL538_RS00025 PF10531 SLBB domain AL538_RS00030 PF00691 OmpA family AL538_RS00035 PF01740 STAS domain AL538_RS00040 PF14743 DNA ligase OB-like domain AL538_RS00040 PF01068 ATP dependent DNA ligase domain AL538_RS00050 PF01554 MatE AL538_RS00055 PF00677 Lumazine binding domain AL538_RS00065 PF03881 Fructosamine kinase AL538_RS00070 PF01339 CheB methylesterase AL538_RS00070 PF00072 Response regulator receiver domain AL538_RS00075 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS00075 PF05230 MASE2 domain AL538_RS00085 PF00816 H-NS histone family AL538_RS00105 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AL538_RS00110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS00120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS00150 PF07434 CblD like pilus biogenesis initiator AL538_RS00165 PF00465 Iron-containing alcohol dehydrogenase AL538_RS00170 PF01116 Fructose-bisphosphate aldolase class-II AL538_RS00175 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AL538_RS00175 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AL538_RS00180 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AL538_RS00180 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AL538_RS00185 PF00107 Zinc-binding dehydrogenase AL538_RS00185 PF08240 Alcohol dehydrogenase GroES-like domain AL538_RS00195 PF00884 Sulfatase AL538_RS00195 PF16385 Domain of unknown function AL538_RS00200 PF04055 Radical SAM superfamily AL538_RS00200 PF13186 Iron-sulfur cluster-binding domain AL538_RS00205 PF07726 ATPase family associated with various cellular activities (AAA) AL538_RS00205 PF17863 AAA lid domain AL538_RS00220 PF00092 von Willebrand factor type A domain AL538_RS00235 PF07702 UTRA domain AL538_RS00235 PF00392 Bacterial regulatory proteins, gntR family AL538_RS00275 PF04002 RadC-like JAB domain AL538_RS00310 PF18019 HD domain AL538_RS00310 PF00271 Helicase conserved C-terminal domain AL538_RS00310 PF00270 DEAD/DEAH box helicase AL538_RS00330 PF09704 CRISPR-associated protein (Cas_Cas5) AL538_RS00335 PF08798 CRISPR associated protein AL538_RS00340 PF01867 CRISPR associated protein Cas1 AL538_RS00345 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) AL538_RS00400 PF00771 FHIPEP family AL538_RS00405 PF01312 FlhB HrpN YscU SpaS Family AL538_RS00435 PF00486 Transcriptional regulatory protein, C terminal AL538_RS00450 PF00813 FliP family AL538_RS00470 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AL538_RS00470 PF02874 ATP synthase alpha/beta family, beta-barrel domain AL538_RS00470 PF18269 T3SS EscN ATPase C-terminal domain AL538_RS00505 PF03707 Bacterial signalling protein N terminal repeat AL538_RS00505 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS00505 PF00563 EAL domain AL538_RS00515 PF00877 NlpC/P60 family AL538_RS00520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS00520 PF00672 HAMP domain AL538_RS00520 PF12729 Four helix bundle sensory module for signal transduction AL538_RS00525 PF13006 Insertion element 4 transposase N-terminal AL538_RS00525 PF01609 Transposase DDE domain AL538_RS00565 PF03942 DTW domain AL538_RS00570 PF00480 ROK family AL538_RS00580 PF03454 MoeA C-terminal region (domain IV) AL538_RS00580 PF00994 Probable molybdopterin binding domain AL538_RS00580 PF03453 MoeA N-terminal region (domain I and II) AL538_RS00585 PF12804 MobA-like NTP transferase domain AL538_RS00590 PF08402 TOBE domain AL538_RS00590 PF00005 ABC transporter AL538_RS00595 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS00600 PF12849 PBP superfamily domain AL538_RS00605 PF00072 Response regulator receiver domain AL538_RS00605 PF00158 Sigma-54 interaction domain AL538_RS00605 PF02954 Bacterial regulatory protein, Fis family AL538_RS00610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS00610 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS00625 PF12848 ABC transporter AL538_RS00625 PF00005 ABC transporter AL538_RS00630 PF02634 FdhD/NarQ family AL538_RS00650 PF02613 Nitrate reductase delta subunit AL538_RS00660 PF01568 Molydopterin dinucleotide binding domain AL538_RS00660 PF00384 Molybdopterin oxidoreductase AL538_RS00660 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AL538_RS00665 PF13247 4Fe-4S dicluster domain AL538_RS00685 PF02146 Sir2 family AL538_RS00690 PF13416 Bacterial extracellular solute-binding protein AL538_RS00695 PF13416 Bacterial extracellular solute-binding protein AL538_RS00700 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS00705 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS00710 PF08402 TOBE domain AL538_RS00710 PF00005 ABC transporter AL538_RS00720 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AL538_RS00730 PF01171 PP-loop family AL538_RS00735 PF00582 Universal stress protein family AL538_RS00740 PF00027 Cyclic nucleotide-binding domain AL538_RS00740 PF13545 Crp-like helix-turn-helix domain AL538_RS00755 PF00403 Heavy-metal-associated domain AL538_RS00765 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AL538_RS00765 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AL538_RS00780 PF00115 Cytochrome C and Quinol oxidase polypeptide I AL538_RS00795 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS00795 PF09308 LuxQ, periplasmic AL538_RS00795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS00795 PF00072 Response regulator receiver domain AL538_RS00820 PF06303 MatP N-terminal domain AL538_RS00820 PF17414 MatP C-terminal ribbon-helix-helix domain AL538_RS00825 PF13654 AAA domain AL538_RS00825 PF05362 Lon protease (S16) C-terminal proteolytic domain AL538_RS00830 PF07977 FabA-like domain AL538_RS00835 PF04957 Ribosome modulation factor AL538_RS00845 PF16326 ABC transporter C-terminal domain AL538_RS00845 PF12848 ABC transporter AL538_RS00845 PF00005 ABC transporter AL538_RS00855 PF01170 Putative RNA methylase family UPF0020 AL538_RS00855 PF10672 S-adenosylmethionine-dependent methyltransferase AL538_RS00855 PF02926 THUMP domain AL538_RS00860 PF07126 Cell-division protein ZapC AL538_RS00865 PF01180 Dihydroorotate dehydrogenase AL538_RS00870 PF05088 Bacterial NAD-glutamate dehydrogenase AL538_RS00875 PF11940 Domain of unknown function (DUF3458) Ig-like fold AL538_RS00875 PF01433 Peptidase family M1 domain AL538_RS00875 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AL538_RS00885 PF17804 Tail specific protease N-terminal domain AL538_RS00885 PF03572 Peptidase family S41 AL538_RS00885 PF00595 PDZ domain AL538_RS00885 PF11818 C-terminal domain of tail specific protease (DUF3340) AL538_RS00890 PF17516 ProQ C-terminal domain AL538_RS00890 PF04352 ProQ/FINO family AL538_RS00895 PF13185 GAF domain AL538_RS00900 PF00664 ABC transporter transmembrane region AL538_RS00900 PF00005 ABC transporter AL538_RS00905 PF04403 Paraquat-inducible protein A AL538_RS00910 PF02470 MlaD protein AL538_RS00915 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF AL538_RS00915 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF AL538_RS00915 PF01189 16S rRNA methyltransferase RsmB/F AL538_RS00935 PF00793 DAHP synthetase I family AL538_RS00940 PF04461 Protein of unknown function (DUF520) AL538_RS00945 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AL538_RS00945 PF14824 Sirohaem biosynthesis protein central AL538_RS00945 PF10414 Sirohaem synthase dimerisation region AL538_RS00950 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL538_RS00955 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS00960 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS00965 PF00005 ABC transporter AL538_RS00970 PF01027 Inhibitor of apoptosis-promoting Bax1 AL538_RS00975 PF04358 DsrC like protein AL538_RS00980 PF00708 Acylphosphatase AL538_RS00985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS00985 PF00672 HAMP domain AL538_RS00985 PF02743 Cache domain AL538_RS00990 PF17785 PUA-like domain AL538_RS00990 PF10672 S-adenosylmethionine-dependent methyltransferase AL538_RS01005 PF05736 OprF membrane domain AL538_RS01005 PF00691 OmpA family AL538_RS01010 PF03707 Bacterial signalling protein N terminal repeat AL538_RS01010 PF13188 PAS domain AL538_RS01010 PF00563 EAL domain AL538_RS01010 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS01015 PF00072 Response regulator receiver domain AL538_RS01015 PF01627 Hpt domain AL538_RS01015 PF00672 HAMP domain AL538_RS01015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS01015 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AL538_RS01015 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS01030 PF12464 Maltose acetyltransferase AL538_RS01030 PF00132 Bacterial transferase hexapeptide (six repeats) AL538_RS01040 PF01928 CYTH domain AL538_RS01050 PF01047 MarR family AL538_RS01060 PF03729 Short repeat of unknown function (DUF308) AL538_RS01065 PF00924 Mechanosensitive ion channel AL538_RS01075 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family AL538_RS01085 PF05736 OprF membrane domain AL538_RS01085 PF00691 OmpA family AL538_RS01120 PF00437 Type II/IV secretion system protein AL538_RS01135 PF00263 Bacterial type II and III secretion system protein AL538_RS01135 PF04972 BON domain AL538_RS01135 PF13629 Pilus formation protein N terminal region AL538_RS01155 PF03466 LysR substrate binding domain AL538_RS01155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS01160 PF12833 Helix-turn-helix domain AL538_RS01170 PF04151 Bacterial pre-peptidase C-terminal domain AL538_RS01170 PF01752 Collagenase AL538_RS01170 PF08453 Peptidase family M9 N-terminal AL538_RS01180 PF00582 Universal stress protein family AL538_RS01185 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AL538_RS01185 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AL538_RS01190 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AL538_RS01195 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AL538_RS01195 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AL538_RS01200 PF12833 Helix-turn-helix domain AL538_RS01205 PF00593 TonB dependent receptor AL538_RS01205 PF07715 TonB-dependent Receptor Plug Domain AL538_RS01210 PF12431 Transcriptional regulator AL538_RS01210 PF00072 Response regulator receiver domain AL538_RS01215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS01215 PF00989 PAS fold AL538_RS01215 PF17203 Single cache domain 3 AL538_RS01215 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AL538_RS01230 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL538_RS01260 PF03466 LysR substrate binding domain AL538_RS01260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS01275 PF03264 NapC/NirT cytochrome c family, N-terminal region AL538_RS01290 PF02630 SCO1/SenC AL538_RS01295 PF08534 Redoxin AL538_RS01310 PF01794 Ferric reductase like transmembrane component AL538_RS01315 PF00174 Oxidoreductase molybdopterin binding domain AL538_RS01345 PF07729 FCD domain AL538_RS01345 PF00392 Bacterial regulatory proteins, gntR family AL538_RS01350 PF01810 LysE type translocator AL538_RS01360 PF05368 NmrA-like family AL538_RS01365 PF03466 LysR substrate binding domain AL538_RS01365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS01370 PF05922 Peptidase inhibitor I9 AL538_RS01370 PF00082 Subtilase family AL538_RS01370 PF04151 Bacterial pre-peptidase C-terminal domain AL538_RS01375 PF00034 Cytochrome c AL538_RS01375 PF03150 Di-haem cytochrome c peroxidase AL538_RS01385 PF13840 ACT domain AL538_RS01385 PF00696 Amino acid kinase family AL538_RS01390 PF06339 Ectoine synthase AL538_RS01395 PF00202 Aminotransferase class-III AL538_RS01400 PF00583 Acetyltransferase (GNAT) family AL538_RS01405 PF02028 BCCT, betaine/carnitine/choline family transporter AL538_RS01415 PF00571 CBS domain AL538_RS01420 PF01554 MatE AL538_RS01435 PF00884 Sulfatase AL538_RS01450 PF02311 AraC-like ligand binding domain AL538_RS01450 PF12833 Helix-turn-helix domain AL538_RS01465 PF01235 Sodium:alanine symporter family AL538_RS01470 PF00171 Aldehyde dehydrogenase family AL538_RS01475 PF02954 Bacterial regulatory protein, Fis family AL538_RS01475 PF00158 Sigma-54 interaction domain AL538_RS01475 PF01590 GAF domain AL538_RS01505 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AL538_RS01510 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase AL538_RS01515 PF04223 Citrate lyase, alpha subunit (CitF) AL538_RS01520 PF03328 HpcH/HpaI aldolase/citrate lyase family AL538_RS01525 PF06857 Malonate decarboxylase delta subunit (MdcD) AL538_RS01530 PF08218 Citrate lyase ligase C-terminal domain AL538_RS01535 PF03390 2-hydroxycarboxylate transporter family AL538_RS01540 PF04277 Oxaloacetate decarboxylase, gamma chain AL538_RS01545 PF02436 Conserved carboxylase domain AL538_RS01545 PF00364 Biotin-requiring enzyme AL538_RS01545 PF00682 HMGL-like AL538_RS01550 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit AL538_RS01555 PF17203 Single cache domain 3 AL538_RS01555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS01560 PF00072 Response regulator receiver domain AL538_RS01560 PF12431 Transcriptional regulator AL538_RS01585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL538_RS01600 PF00293 NUDIX domain AL538_RS01650 PF14497 Glutathione S-transferase, C-terminal domain AL538_RS01650 PF02798 Glutathione S-transferase, N-terminal domain AL538_RS01660 PF04209 homogentisate 1,2-dioxygenase AL538_RS01665 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL538_RS01675 PF07687 Peptidase dimerisation domain AL538_RS01675 PF01546 Peptidase family M20/M25/M40 AL538_RS01680 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL538_RS01685 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS01690 PF12911 N-terminal TM domain of oligopeptide transport permease C AL538_RS01690 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS01695 PF00005 ABC transporter AL538_RS01695 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL538_RS01700 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL538_RS01700 PF00005 ABC transporter AL538_RS01710 PF00041 Fibronectin type III domain AL538_RS01710 PF12561 ToxR activated gene A lipoprotein domain AL538_RS01715 PF01752 Collagenase AL538_RS01715 PF08453 Peptidase family M9 N-terminal AL538_RS01725 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS01725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS01730 PF00072 Response regulator receiver domain AL538_RS01730 PF00486 Transcriptional regulatory protein, C terminal AL538_RS01740 PF00873 AcrB/AcrD/AcrF family AL538_RS01745 PF00529 HlyD membrane-fusion protein of T1SS AL538_RS01745 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL538_RS01765 PF01048 Phosphorylase superfamily AL538_RS01770 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS01775 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS01780 PF08402 TOBE domain AL538_RS01780 PF00005 ABC transporter AL538_RS01785 PF00701 Dihydrodipicolinate synthetase family AL538_RS01790 PF02423 Ornithine cyclodeaminase/mu-crystallin family AL538_RS01800 PF01593 Flavin containing amine oxidoreductase AL538_RS01805 PF05544 Proline racemase AL538_RS01810 PF00171 Aldehyde dehydrogenase family AL538_RS01815 PF00392 Bacterial regulatory proteins, gntR family AL538_RS01825 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS01825 PF00072 Response regulator receiver domain AL538_RS01830 PF05971 RNA methyltransferase AL538_RS01835 PF01863 Protein of unknown function DUF45 AL538_RS01840 PF07963 Prokaryotic N-terminal methylation motif AL538_RS01850 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL538_RS01865 PF03466 LysR substrate binding domain AL538_RS01865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS01870 PF07690 Major Facilitator Superfamily AL538_RS01920 PF00005 ABC transporter AL538_RS01925 PF01032 FecCD transport family AL538_RS01930 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AL538_RS01940 PF00300 Histidine phosphatase superfamily (branch 1) AL538_RS01945 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AL538_RS01950 PF02654 Cobalamin-5-phosphate synthase AL538_RS01955 PF02277 Phosphoribosyltransferase AL538_RS01960 PF01613 Flavin reductase like domain AL538_RS01965 PF13460 NAD(P)H-binding AL538_RS01970 PF00375 Sodium:dicarboxylate symporter family AL538_RS01980 PF08411 Exonuclease C-terminal AL538_RS01980 PF00929 Exonuclease AL538_RS01985 PF03788 LrgA family AL538_RS01990 PF04172 LrgB-like family AL538_RS01995 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region AL538_RS01995 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AL538_RS02000 PF02222 ATP-grasp domain AL538_RS02005 PF05724 Thiopurine S-methyltransferase (TPMT) AL538_RS02015 PF00216 Bacterial DNA-binding protein AL538_RS02055 PF03484 tRNA synthetase B5 domain AL538_RS02055 PF03147 Ferredoxin-fold anticodon binding domain AL538_RS02055 PF01588 Putative tRNA binding domain AL538_RS02055 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AL538_RS02055 PF03483 B3/4 domain AL538_RS02060 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AL538_RS02060 PF01409 tRNA synthetases class II core domain (F) AL538_RS02065 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS02065 PF17158 Membrane-associated sensor, integral membrane domain AL538_RS02100 PF01906 Putative heavy-metal-binding AL538_RS02105 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL538_RS02110 PF01042 Endoribonuclease L-PSP AL538_RS02115 PF00453 Ribosomal protein L20 AL538_RS02120 PF01632 Ribosomal protein L35 AL538_RS02125 PF00707 Translation initiation factor IF-3, C-terminal domain AL538_RS02125 PF05198 Translation initiation factor IF-3, N-terminal domain AL538_RS02130 PF03129 Anticodon binding domain AL538_RS02130 PF02824 TGS domain AL538_RS02130 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AL538_RS02130 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AL538_RS02145 PF00392 Bacterial regulatory proteins, gntR family AL538_RS02145 PF07702 UTRA domain AL538_RS02150 PF01979 Amidohydrolase family AL538_RS02155 PF00491 Arginase family AL538_RS02160 PF17392 Urocanase C-terminal domain AL538_RS02160 PF01175 Urocanase Rossmann-like domain AL538_RS02160 PF17391 Urocanase N-terminal domain AL538_RS02165 PF00221 Aromatic amino acid lyase AL538_RS02180 PF02913 FAD linked oxidases, C-terminal domain AL538_RS02180 PF13183 4Fe-4S dicluster domain AL538_RS02180 PF01565 FAD binding domain AL538_RS02195 PF05736 OprF membrane domain AL538_RS02195 PF00691 OmpA family AL538_RS02215 PF01259 SAICAR synthetase AL538_RS02255 PF00583 Acetyltransferase (GNAT) family AL538_RS02490 PF05016 ParE toxin of type II toxin-antitoxin system, parDE AL538_RS02510 PF01844 HNH endonuclease AL538_RS02525 PF00043 Glutathione S-transferase, C-terminal domain AL538_RS02525 PF02798 Glutathione S-transferase, N-terminal domain AL538_RS02540 PF13006 Insertion element 4 transposase N-terminal AL538_RS02540 PF01609 Transposase DDE domain AL538_RS02620 PF13344 Haloacid dehalogenase-like hydrolase AL538_RS02620 PF00293 NUDIX domain AL538_RS02715 PF03575 Peptidase family S51 AL538_RS02745 PF08378 Nuclease-related domain AL538_RS02815 PF04266 ASCH domain AL538_RS02925 PF14602 Hexapeptide repeat of succinyl-transferase AL538_RS02925 PF12464 Maltose acetyltransferase AL538_RS02945 PF13302 Acetyltransferase (GNAT) domain AL538_RS02955 PF05128 Domain of unknown function (DUF697) AL538_RS02960 PF04317 YcjX-like family, DUF463 AL538_RS02975 PF04715 Anthranilate synthase component I, N terminal region AL538_RS02975 PF00425 chorismate binding enzyme AL538_RS02980 PF09308 LuxQ, periplasmic AL538_RS02980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS02980 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS02980 PF00072 Response regulator receiver domain AL538_RS02990 PF00293 NUDIX domain AL538_RS02995 PF03222 Tryptophan/tyrosine permease family AL538_RS03000 PF03313 Serine dehydratase alpha chain AL538_RS03000 PF03315 Serine dehydratase beta chain AL538_RS03005 PF13188 PAS domain AL538_RS03005 PF03707 Bacterial signalling protein N terminal repeat AL538_RS03005 PF00563 EAL domain AL538_RS03005 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS03015 PF00196 Bacterial regulatory proteins, luxR family AL538_RS03015 PF00072 Response regulator receiver domain AL538_RS03020 PF01242 6-pyruvoyl tetrahydropterin synthase AL538_RS03025 PF17200 Single Cache domain 2 AL538_RS03025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS03025 PF00672 HAMP domain AL538_RS03030 PF01336 OB-fold nucleic acid binding domain AL538_RS03030 PF00152 tRNA synthetases class II (D, K and N) AL538_RS03045 PF00155 Aminotransferase class I and II AL538_RS03045 PF00392 Bacterial regulatory proteins, gntR family AL538_RS03060 PF00672 HAMP domain AL538_RS03060 PF01966 HD domain AL538_RS03065 PF00155 Aminotransferase class I and II AL538_RS03085 PF02743 Cache domain AL538_RS03085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS03085 PF00672 HAMP domain AL538_RS03090 PF02028 BCCT, betaine/carnitine/choline family transporter AL538_RS03095 PF01047 MarR family AL538_RS03100 PF00072 Response regulator receiver domain AL538_RS03100 PF00196 Bacterial regulatory proteins, luxR family AL538_RS03105 PF07730 Histidine kinase AL538_RS03105 PF17200 Single Cache domain 2 AL538_RS03110 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AL538_RS03120 PF03480 Bacterial extracellular solute-binding protein, family 7 AL538_RS03135 PF00753 Metallo-beta-lactamase superfamily AL538_RS03140 PF05951 Bacterial protein of unknown function (DUF882) AL538_RS03145 PF03734 L,D-transpeptidase catalytic domain AL538_RS03145 PF01471 Putative peptidoglycan binding domain AL538_RS03170 PF00925 GTP cyclohydrolase II AL538_RS03180 PF03918 Cytochrome C biogenesis protein AL538_RS03185 PF08534 Redoxin AL538_RS03190 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AL538_RS03190 PF01578 Cytochrome C assembly protein AL538_RS03195 PF03916 Polysulphide reductase, NrfD AL538_RS03200 PF13247 4Fe-4S dicluster domain AL538_RS03210 PF02335 Cytochrome c552 AL538_RS03225 PF03989 DNA gyrase C-terminal domain, beta-propeller AL538_RS03225 PF00521 DNA gyrase/topoisomerase IV, subunit A AL538_RS03240 PF02867 Ribonucleotide reductase, barrel domain AL538_RS03240 PF03477 ATP cone domain AL538_RS03240 PF00317 Ribonucleotide reductase, all-alpha domain AL538_RS03245 PF00268 Ribonucleotide reductase, small chain AL538_RS03255 PF00994 Probable molybdopterin binding domain AL538_RS03270 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AL538_RS03275 PF16653 Saccharopine dehydrogenase C-terminal domain AL538_RS03275 PF03435 Saccharopine dehydrogenase NADP binding domain AL538_RS03280 PF00202 Aminotransferase class-III AL538_RS03310 PF01066 CDP-alcohol phosphatidyltransferase AL538_RS03315 PF08459 UvrC Helix-hairpin-helix N-terminal AL538_RS03315 PF01541 GIY-YIG catalytic domain AL538_RS03315 PF02151 UvrB/uvrC motif AL538_RS03320 PF00196 Bacterial regulatory proteins, luxR family AL538_RS03320 PF00072 Response regulator receiver domain AL538_RS03325 PF03104 DNA polymerase family B, exonuclease domain AL538_RS03325 PF00136 DNA polymerase family B AL538_RS03335 PF08207 Elongation factor P (EF-P) KOW-like domain AL538_RS03335 PF01132 Elongation factor P (EF-P) OB domain AL538_RS03335 PF09285 Elongation factor P, C-terminal AL538_RS03340 PF04269 Protein of unknown function, DUF440 AL538_RS03345 PF00849 RNA pseudouridylate synthase AL538_RS03345 PF01479 S4 domain AL538_RS03355 PF01300 Telomere recombination AL538_RS03360 PF02811 PHP domain AL538_RS03365 PF08056 Tryptophan operon leader peptide AL538_RS03370 PF04715 Anthranilate synthase component I, N terminal region AL538_RS03370 PF00425 chorismate binding enzyme AL538_RS03375 PF00117 Glutamine amidotransferase class-I AL538_RS03380 PF00591 Glycosyl transferase family, a/b domain AL538_RS03380 PF02885 Glycosyl transferase family, helical bundle domain AL538_RS03385 PF00218 Indole-3-glycerol phosphate synthase AL538_RS03385 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AL538_RS03390 PF00291 Pyridoxal-phosphate dependent enzyme AL538_RS03395 PF00290 Tryptophan synthase alpha chain AL538_RS03400 PF00375 Sodium:dicarboxylate symporter family AL538_RS03405 PF17327 Acyl homoserine lactone synthase AL538_RS03410 PF00072 Response regulator receiver domain AL538_RS03410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS03420 PF04279 Intracellular septation protein A AL538_RS03425 PF03061 Thioesterase superfamily AL538_RS03430 PF03795 YCII-related domain AL538_RS03440 PF08267 Cobalamin-independent synthase, N-terminal domain AL538_RS03440 PF01717 Cobalamin-independent synthase, Catalytic domain AL538_RS03445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS03445 PF03466 LysR substrate binding domain AL538_RS03460 PF00563 EAL domain AL538_RS03460 PF00498 FHA domain AL538_RS03460 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS03465 PF08497 Radical SAM N-terminal AL538_RS03465 PF04055 Radical SAM superfamily AL538_RS03465 PF11842 Domain of unknown function (DUF3362) AL538_RS03470 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AL538_RS03470 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL538_RS03475 PF00375 Sodium:dicarboxylate symporter family AL538_RS03480 PF01042 Endoribonuclease L-PSP AL538_RS03485 PF08348 YheO-like PAS domain AL538_RS03485 PF13309 HTH domain AL538_RS03490 PF00672 HAMP domain AL538_RS03490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS03500 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AL538_RS03505 PF00535 Glycosyl transferase family 2 AL538_RS03510 PF00486 Transcriptional regulatory protein, C terminal AL538_RS03510 PF00072 Response regulator receiver domain AL538_RS03515 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS03515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS03515 PF00672 HAMP domain AL538_RS03535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS03535 PF03466 LysR substrate binding domain AL538_RS03540 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL538_RS03540 PF00529 HlyD membrane-fusion protein of T1SS AL538_RS03550 PF01047 MarR family AL538_RS03565 PF01717 Cobalamin-independent synthase, Catalytic domain AL538_RS03565 PF08267 Cobalamin-independent synthase, N-terminal domain AL538_RS03595 PF12704 MacB-like periplasmic core domain AL538_RS03595 PF02687 FtsX-like permease family AL538_RS03595 PF00005 ABC transporter AL538_RS03600 PF00005 ABC transporter AL538_RS03600 PF12704 MacB-like periplasmic core domain AL538_RS03600 PF02687 FtsX-like permease family AL538_RS03605 PF02687 FtsX-like permease family AL538_RS03605 PF12704 MacB-like periplasmic core domain AL538_RS03625 PF00440 Bacterial regulatory proteins, tetR family AL538_RS03630 PF00583 Acetyltransferase (GNAT) family AL538_RS03655 PF00085 Thioredoxin AL538_RS03660 PF11412 Disulphide bond corrector protein DsbC AL538_RS03660 PF02683 Cytochrome C biogenesis protein transmembrane region AL538_RS03670 PF03466 LysR substrate binding domain AL538_RS03670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS03675 PF04403 Paraquat-inducible protein A AL538_RS03680 PF02470 MlaD protein AL538_RS03685 PF03886 ABC-type transport auxiliary lipoprotein component AL538_RS03740 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL538_RS03745 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AL538_RS03750 PF18073 Rubredoxin metal binding domain AL538_RS03755 PF06305 Lipopolysaccharide assembly protein A domain AL538_RS03760 PF00216 Bacterial DNA-binding protein AL538_RS03765 PF00575 S1 RNA binding domain AL538_RS03770 PF02224 Cytidylate kinase AL538_RS03775 PF01343 Peptidase family S49 AL538_RS03775 PF08496 Peptidase family S49 N-terminal AL538_RS03780 PF00106 short chain dehydrogenase AL538_RS03790 PF00873 AcrB/AcrD/AcrF family AL538_RS03815 PF01336 OB-fold nucleic acid binding domain AL538_RS03815 PF07733 Bacterial DNA polymerase III alpha NTPase domain AL538_RS03815 PF14579 Helix-hairpin-helix motif AL538_RS03815 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AL538_RS03815 PF02811 PHP domain AL538_RS03820 PF00072 Response regulator receiver domain AL538_RS03820 PF01584 CheW-like domain AL538_RS03825 PF00480 ROK family AL538_RS03830 PF00224 Pyruvate kinase, barrel domain AL538_RS03830 PF02887 Pyruvate kinase, alpha/beta domain AL538_RS03835 PF01734 Patatin-like phospholipase AL538_RS03845 PF00209 Sodium:neurotransmitter symporter family AL538_RS03855 PF00367 phosphotransferase system, EIIB AL538_RS03855 PF02378 Phosphotransferase system, EIIC AL538_RS03860 PF01026 TatD related DNase AL538_RS03865 PF09115 DNA polymerase III, delta subunit, C terminal AL538_RS03870 PF02223 Thymidylate kinase AL538_RS03875 PF02618 YceG-like family AL538_RS03880 PF01063 Amino-transferase class IV AL538_RS03885 PF02801 Beta-ketoacyl synthase, C-terminal domain AL538_RS03885 PF00109 Beta-ketoacyl synthase, N-terminal domain AL538_RS03890 PF00550 Phosphopantetheine attachment site AL538_RS03900 PF00698 Acyl transferase domain AL538_RS03905 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AL538_RS03905 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AL538_RS03910 PF02504 Fatty acid synthesis protein AL538_RS03915 PF01783 Ribosomal L32p protein family AL538_RS03920 PF02620 Large ribosomal RNA subunit accumulation protein YceD AL538_RS03925 PF02545 Maf-like protein AL538_RS03930 PF01479 S4 domain AL538_RS03930 PF00849 RNA pseudouridylate synthase AL538_RS03935 PF12111 Polyribonucleotide phosphorylase C terminal AL538_RS03935 PF10150 Ribonuclease E/G family AL538_RS03935 PF00575 S1 RNA binding domain AL538_RS03945 PF00916 Sulfate permease family AL538_RS03945 PF01740 STAS domain AL538_RS03950 PF01451 Low molecular weight phosphotyrosine protein phosphatase AL538_RS03955 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AL538_RS03955 PF12557 Cob(I)alamin adenosyltransferase N terminal AL538_RS03965 PF00485 Phosphoribulokinase / Uridine kinase family AL538_RS03970 PF10609 NUBPL iron-transfer P-loop NTPase AL538_RS03975 PF01588 Putative tRNA binding domain AL538_RS03975 PF09334 tRNA synthetases class I (M) AL538_RS03985 PF00392 Bacterial regulatory proteins, gntR family AL538_RS03985 PF07840 FadR C-terminal domain AL538_RS03990 PF06450 Bacterial Na+/H+ antiporter B (NhaB) AL538_RS03995 PF02600 Disulfide bond formation protein DsbB AL538_RS04000 PF02810 SEC-C motif AL538_RS04000 PF07517 SecA DEAD-like domain AL538_RS04000 PF07516 SecA Wing and Scaffold domain AL538_RS04000 PF01043 SecA preprotein cross-linking domain AL538_RS04005 PF01207 Dihydrouridine synthase (Dus) AL538_RS04010 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS04015 PF00128 Alpha amylase, catalytic domain AL538_RS04015 PF02903 Alpha amylase, N-terminal ig-like domain AL538_RS04020 PF00005 ABC transporter AL538_RS04025 PF02653 Branched-chain amino acid transport system / permease component AL538_RS04040 PF04217 Protein of unknown function, DUF412 AL538_RS04045 PF00871 Acetokinase family AL538_RS04050 PF07085 DRTGG domain AL538_RS04050 PF01515 Phosphate acetyl/butaryl transferase AL538_RS04055 PF13194 Domain of unknown function (DUF4010) AL538_RS04060 PF13409 Glutathione S-transferase, N-terminal domain AL538_RS04065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL538_RS04065 PF00005 ABC transporter AL538_RS04070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL538_RS04070 PF00005 ABC transporter AL538_RS04075 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS04075 PF12911 N-terminal TM domain of oligopeptide transport permease C AL538_RS04080 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS04085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL538_RS04090 PF02391 MoaE protein AL538_RS04095 PF02597 ThiS family AL538_RS04100 PF01967 MoaC family AL538_RS04105 PF00994 Probable molybdopterin binding domain AL538_RS04110 PF06463 Molybdenum Cofactor Synthesis C AL538_RS04110 PF04055 Radical SAM superfamily AL538_RS04115 PF01933 Uncharacterised protein family UPF0052 AL538_RS04120 PF01627 Hpt domain AL538_RS04125 PF02954 Bacterial regulatory protein, Fis family AL538_RS04125 PF00158 Sigma-54 interaction domain AL538_RS04125 PF00072 Response regulator receiver domain AL538_RS04130 PF17757 UvrB interaction domain AL538_RS04130 PF12344 Ultra-violet resistance protein B AL538_RS04130 PF02151 UvrB/uvrC motif AL538_RS04130 PF04851 Type III restriction enzyme, res subunit AL538_RS04130 PF00271 Helicase conserved C-terminal domain AL538_RS04140 PF02901 Pyruvate formate lyase-like AL538_RS04140 PF01228 Glycine radical AL538_RS04145 PF02508 Rnf-Nqr subunit, membrane protein AL538_RS04150 PF04060 Putative Fe-S cluster AL538_RS04155 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AL538_RS04155 PF12838 4Fe-4S dicluster domain AL538_RS04155 PF13375 RnfC Barrel sandwich hybrid domain AL538_RS04155 PF10531 SLBB domain AL538_RS04160 PF03116 NQR2, RnfD, RnfE family AL538_RS04165 PF04205 FMN-binding domain AL538_RS04170 PF02508 Rnf-Nqr subunit, membrane protein AL538_RS04175 PF10576 Iron-sulfur binding domain of endonuclease III AL538_RS04175 PF00730 HhH-GPD superfamily base excision DNA repair protein AL538_RS04175 PF00633 Helix-hairpin-helix motif AL538_RS04180 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL538_RS04185 PF10952 Protein of unknown function (DUF2753) AL538_RS04190 PF18393 MotY N-terminal domain AL538_RS04190 PF00691 OmpA family AL538_RS04195 PF00929 Exonuclease AL538_RS04200 PF03553 Na+/H+ antiporter family AL538_RS04200 PF13726 Na+-H+ antiporter family AL538_RS04235 PF03135 CagE, TrbE, VirB family, component of type IV transporter system AL538_RS04255 PF04335 VirB8 protein AL538_RS04260 PF03524 Conjugal transfer protein AL538_RS04265 PF03743 Bacterial conjugation TrbI-like protein AL538_RS04270 PF00437 Type II/IV secretion system protein AL538_RS04275 PF02534 Type IV secretory system Conjugative DNA transfer AL538_RS04285 PF01751 Toprim domain AL538_RS04285 PF01131 DNA topoisomerase AL538_RS04290 PF04463 Protein of unknown function (DUF523) AL538_RS04310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS04310 PF03466 LysR substrate binding domain AL538_RS04320 PF00005 ABC transporter AL538_RS04325 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS04330 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS04335 PF12849 PBP superfamily domain AL538_RS04360 PF03466 LysR substrate binding domain AL538_RS04360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS04365 PF18821 Large polyvalent protein-associated domain 7 AL538_RS04365 PF03432 Relaxase/Mobilisation nuclease domain AL538_RS04415 PF00183 Hsp90 protein AL538_RS04430 PF00912 Transglycosylase AL538_RS04430 PF00905 Penicillin binding protein transpeptidase domain AL538_RS04430 PF14814 Bifunctional transglycosylase second domain AL538_RS04440 PF04002 RadC-like JAB domain AL538_RS04465 PF01389 OmpA-like transmembrane domain AL538_RS04465 PF00691 OmpA family AL538_RS04525 PF02899 Phage integrase, N-terminal SAM-like domain AL538_RS04525 PF00589 Phage integrase family AL538_RS04530 PF00462 Glutaredoxin AL538_RS04535 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AL538_RS04535 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AL538_RS04550 PF00171 Aldehyde dehydrogenase family AL538_RS04550 PF00465 Iron-containing alcohol dehydrogenase AL538_RS04555 PF01914 MarC family integral membrane protein AL538_RS04560 PF00520 Ion transport protein AL538_RS04560 PF00027 Cyclic nucleotide-binding domain AL538_RS04565 PF02774 Semialdehyde dehydrogenase, dimerisation domain AL538_RS04565 PF01118 Semialdehyde dehydrogenase, NAD binding domain AL538_RS04570 PF03553 Na+/H+ antiporter family AL538_RS04585 PF04245 37-kD nucleoid-associated bacterial protein AL538_RS04590 PF07208 Protein of unknown function (DUF1414) AL538_RS04595 PF11893 Domain of unknown function (DUF3413) AL538_RS04595 PF00884 Sulfatase AL538_RS04605 PF00850 Histone deacetylase domain AL538_RS04610 PF00106 short chain dehydrogenase AL538_RS04620 PF01751 Toprim domain AL538_RS04620 PF01131 DNA topoisomerase AL538_RS04625 PF00881 Nitroreductase family AL538_RS04630 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AL538_RS04630 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL538_RS04635 PF01343 Peptidase family S49 AL538_RS04640 PF17763 Glutaminase/Asparaginase C-terminal domain AL538_RS04640 PF00710 Asparaginase, N-terminal AL538_RS04645 PF07023 Protein of unknown function (DUF1315) AL538_RS04655 PF01641 SelR domain AL538_RS04660 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AL538_RS04660 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AL538_RS04665 PF01263 Aldose 1-epimerase AL538_RS04670 PF01156 Inosine-uridine preferring nucleoside hydrolase AL538_RS04675 PF13426 PAS domain AL538_RS04675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS04675 PF08447 PAS fold AL538_RS04680 PF13847 Methyltransferase domain AL538_RS04695 PF02028 BCCT, betaine/carnitine/choline family transporter AL538_RS04700 PF00245 Alkaline phosphatase AL538_RS04710 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL538_RS04715 PF03992 Antibiotic biosynthesis monooxygenase AL538_RS04720 PF00924 Mechanosensitive ion channel AL538_RS04720 PF05552 Conserved TM helix AL538_RS04725 PF04226 Transglycosylase associated protein AL538_RS04735 PF03692 Putative zinc- or iron-chelating domain AL538_RS04740 PF03692 Putative zinc- or iron-chelating domain AL538_RS04745 PF13309 HTH domain AL538_RS04745 PF08348 YheO-like PAS domain AL538_RS04755 PF01042 Endoribonuclease L-PSP AL538_RS04765 PF00230 Major intrinsic protein AL538_RS04770 PF13662 Toprim domain AL538_RS04770 PF02132 RecR protein AL538_RS04775 PF02575 YbaB/EbfC DNA-binding family AL538_RS04780 PF12170 DNA polymerase III tau subunit V interacting with alpha AL538_RS04780 PF12169 DNA polymerase III subunits gamma and tau domain III AL538_RS04785 PF00156 Phosphoribosyl transferase domain AL538_RS04790 PF04304 Protein of unknown function (DUF454) AL538_RS04795 PF00072 Response regulator receiver domain AL538_RS04800 PF03466 LysR substrate binding domain AL538_RS04800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS04805 PF00156 Phosphoribosyl transferase domain AL538_RS04810 PF02674 Colicin V production protein AL538_RS04815 PF05036 Sporulation related domain AL538_RS04820 PF02875 Mur ligase family, glutamate ligase domain AL538_RS04820 PF08245 Mur ligase middle domain AL538_RS04825 PF01039 Carboxyl transferase domain AL538_RS04825 PF17848 Acetyl-coA carboxylase zinc finger domain AL538_RS04830 PF01416 tRNA pseudouridine synthase AL538_RS04840 PF02774 Semialdehyde dehydrogenase, dimerisation domain AL538_RS04840 PF01118 Semialdehyde dehydrogenase, NAD binding domain AL538_RS04845 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AL538_RS04845 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AL538_RS04845 PF11890 Domain of unknown function (DUF3410) AL538_RS04850 PF02801 Beta-ketoacyl synthase, C-terminal domain AL538_RS04850 PF00109 Beta-ketoacyl synthase, N-terminal domain AL538_RS04855 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AL538_RS04855 PF01266 FAD dependent oxidoreductase AL538_RS04865 PF08891 YfcL protein AL538_RS04870 PF04315 Elongation factor P hydroxylase AL538_RS04875 PF03458 UPF0126 domain AL538_RS04880 PF01264 Chorismate synthase AL538_RS04885 PF05175 Methyltransferase small domain AL538_RS04890 PF01713 Smr domain AL538_RS04895 PF00300 Histidine phosphatase superfamily (branch 1) AL538_RS04900 PF16187 Middle or third domain of peptidase_M16 AL538_RS04900 PF00675 Insulinase (Peptidase family M16) AL538_RS04900 PF05193 Peptidase M16 inactive domain AL538_RS04905 PF00378 Enoyl-CoA hydratase/isomerase AL538_RS04905 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AL538_RS04905 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AL538_RS04910 PF02803 Thiolase, C-terminal domain AL538_RS04910 PF00108 Thiolase, N-terminal domain AL538_RS04915 PF04542 Sigma-70 region 2 AL538_RS04915 PF08281 Sigma-70, region 4 AL538_RS04925 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AL538_RS04930 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AL538_RS04935 PF04333 MlaA lipoprotein AL538_RS04940 PF03918 Cytochrome C biogenesis protein AL538_RS04945 PF03918 Cytochrome C biogenesis protein AL538_RS04950 PF08534 Redoxin AL538_RS04955 PF01578 Cytochrome C assembly protein AL538_RS04955 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AL538_RS04960 PF03100 CcmE AL538_RS04970 PF01578 Cytochrome C assembly protein AL538_RS04975 PF03379 CcmB protein AL538_RS04980 PF00005 ABC transporter AL538_RS04990 PF01584 CheW-like domain AL538_RS05000 PF13614 AAA domain AL538_RS05005 PF01339 CheB methylesterase AL538_RS05005 PF00072 Response regulator receiver domain AL538_RS05010 PF00072 Response regulator receiver domain AL538_RS05010 PF02895 Signal transducing histidine kinase, homodimeric domain AL538_RS05010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS05010 PF01584 CheW-like domain AL538_RS05010 PF01627 Hpt domain AL538_RS05015 PF04344 Chemotaxis phosphatase, CheZ AL538_RS05020 PF00072 Response regulator receiver domain AL538_RS05025 PF04542 Sigma-70 region 2 AL538_RS05025 PF04539 Sigma-70 region 3 AL538_RS05025 PF04545 Sigma-70, region 4 AL538_RS05030 PF10609 NUBPL iron-transfer P-loop NTPase AL538_RS05035 PF00448 SRP54-type protein, GTPase domain AL538_RS05040 PF00771 FHIPEP family AL538_RS05045 PF01312 FlhB HrpN YscU SpaS Family AL538_RS05050 PF01311 Bacterial export proteins, family 1 AL538_RS05055 PF01313 Bacterial export proteins, family 3 AL538_RS05060 PF00813 FliP family AL538_RS05065 PF04347 Flagellar biosynthesis protein, FliO AL538_RS05070 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AL538_RS05075 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AL538_RS05075 PF02154 Flagellar motor switch protein FliM AL538_RS05100 PF18269 T3SS EscN ATPase C-terminal domain AL538_RS05100 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AL538_RS05110 PF14842 FliG N-terminal domain AL538_RS05110 PF14841 FliG middle domain AL538_RS05110 PF01706 FliG C-terminal domain AL538_RS05115 PF08345 Flagellar M-ring protein C-terminal AL538_RS05115 PF01514 Secretory protein of YscJ/FliF family AL538_RS05120 PF02049 Flagellar hook-basal body complex protein FliE AL538_RS05125 PF00158 Sigma-54 interaction domain AL538_RS05125 PF00072 Response regulator receiver domain AL538_RS05125 PF02954 Bacterial regulatory protein, Fis family AL538_RS05130 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS05130 PF13188 PAS domain AL538_RS05130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS05135 PF00158 Sigma-54 interaction domain AL538_RS05135 PF02954 Bacterial regulatory protein, Fis family AL538_RS05135 PF06490 Flagellar regulatory protein FleQ AL538_RS05140 PF02561 Flagellar protein FliS AL538_RS05150 PF07196 Flagellin hook IN motif AL538_RS05150 PF07195 Flagellar hook-associated protein 2 C-terminus AL538_RS05150 PF02465 Flagellar hook-associated protein 2 N-terminus AL538_RS05155 PF03646 FlaG protein AL538_RS05160 PF00700 Bacterial flagellin C-terminal helical region AL538_RS05160 PF07196 Flagellin hook IN motif AL538_RS05160 PF00669 Bacterial flagellin N-terminal helical region AL538_RS05165 PF07196 Flagellin hook IN motif AL538_RS05165 PF00669 Bacterial flagellin N-terminal helical region AL538_RS05165 PF00700 Bacterial flagellin C-terminal helical region AL538_RS05175 PF00669 Bacterial flagellin N-terminal helical region AL538_RS05175 PF07196 Flagellin hook IN motif AL538_RS05175 PF00700 Bacterial flagellin C-terminal helical region AL538_RS05185 PF11975 Family 4 glycosyl hydrolase C-terminal domain AL538_RS05185 PF02056 Family 4 glycosyl hydrolase AL538_RS05190 PF12833 Helix-turn-helix domain AL538_RS05195 PF04261 Dyp-type peroxidase family AL538_RS05200 PF11143 Protein of unknown function (DUF2919) AL538_RS05220 PF03960 ArsC family AL538_RS05225 PF07687 Peptidase dimerisation domain AL538_RS05225 PF01546 Peptidase family M20/M25/M40 AL538_RS05240 PF06804 NlpB/DapX lipoprotein AL538_RS05245 PF00701 Dihydrodipicolinate synthetase family AL538_RS05250 PF01842 ACT domain AL538_RS05255 PF00578 AhpC/TSA family AL538_RS05260 PF01594 AI-2E family transporter AL538_RS05270 PF13181 Tetratricopeptide repeat AL538_RS05270 PF01435 Peptidase family M48 AL538_RS05275 PF03960 ArsC family AL538_RS05280 PF03358 NADPH-dependent FMN reductase AL538_RS05295 PF00860 Permease family AL538_RS05305 PF02769 AIR synthase related protein, C-terminal domain AL538_RS05305 PF00586 AIR synthase related protein, N-terminal domain AL538_RS05310 PF00551 Formyl transferase AL538_RS05315 PF13230 Glutamine amidotransferases class-II AL538_RS05320 PF13580 SIS domain AL538_RS05325 PF02770 Acyl-CoA dehydrogenase, middle domain AL538_RS05325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL538_RS05325 PF09317 Domain of unknown function (DUF1974) AL538_RS05325 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL538_RS05345 PF00929 Exonuclease AL538_RS05350 PF00075 RNase H AL538_RS05355 PF08241 Methyltransferase domain AL538_RS05360 PF16123 Hydroxyacylglutathione hydrolase C-terminus AL538_RS05365 PF01464 Transglycosylase SLT domain AL538_RS05365 PF01476 LysM domain AL538_RS05380 PF00543 Nitrogen regulatory protein P-II AL538_RS05385 PF00034 Cytochrome c AL538_RS05390 PF09179 TilS substrate binding domain AL538_RS05390 PF11734 TilS substrate C-terminal domain AL538_RS05390 PF01171 PP-loop family AL538_RS05395 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AL538_RS05400 PF02811 PHP domain AL538_RS05400 PF14579 Helix-hairpin-helix motif AL538_RS05400 PF07733 Bacterial DNA polymerase III alpha NTPase domain AL538_RS05400 PF01336 OB-fold nucleic acid binding domain AL538_RS05400 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AL538_RS05405 PF01351 Ribonuclease HII AL538_RS05410 PF02684 Lipid-A-disaccharide synthetase AL538_RS05415 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AL538_RS05415 PF00132 Bacterial transferase hexapeptide (six repeats) AL538_RS05420 PF07977 FabA-like domain AL538_RS05425 PF00132 Bacterial transferase hexapeptide (six repeats) AL538_RS05425 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AL538_RS05430 PF03938 Outer membrane protein (OmpH-like) AL538_RS05435 PF01103 Surface antigen AL538_RS05435 PF07244 Surface antigen variable number repeat AL538_RS05440 PF02163 Peptidase family M50 AL538_RS05440 PF17820 PDZ domain AL538_RS05445 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AL538_RS05445 PF13288 DXP reductoisomerase C-terminal domain AL538_RS05445 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AL538_RS05455 PF01255 Putative undecaprenyl diphosphate synthase AL538_RS05460 PF01765 Ribosome recycling factor AL538_RS05465 PF00696 Amino acid kinase family AL538_RS05470 PF00889 Elongation factor TS AL538_RS05475 PF00318 Ribosomal protein S2 AL538_RS05480 PF00557 Metallopeptidase family M24 AL538_RS05485 PF01909 Nucleotidyltransferase domain AL538_RS05485 PF01966 HD domain AL538_RS05485 PF08335 GlnD PII-uridylyltransferase AL538_RS05485 PF01842 ACT domain AL538_RS05490 PF11944 Protein of unknown function (DUF3461) AL538_RS05495 PF00849 RNA pseudouridylate synthase AL538_RS05500 PF04287 tRNA pseudouridine synthase C AL538_RS05530 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AL538_RS05540 PF01370 NAD dependent epimerase/dehydratase family AL538_RS05565 PF03806 AbgT putative transporter family AL538_RS05570 PF01197 Ribosomal protein L31 AL538_RS05575 PF18389 TrmO C-terminal domain AL538_RS05575 PF01980 tRNA-methyltransferase O AL538_RS05580 PF04073 Aminoacyl-tRNA editing domain AL538_RS05580 PF03129 Anticodon binding domain AL538_RS05580 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AL538_RS05590 PF06786 Uncharacterised protein family (UPF0253) AL538_RS05600 PF00209 Sodium:neurotransmitter symporter family AL538_RS05605 PF00041 Fibronectin type III domain AL538_RS05605 PF00704 Glycosyl hydrolases family 18 AL538_RS05615 PF01272 Transcription elongation factor, GreA/GreB, C-term AL538_RS05615 PF03449 Transcription elongation factor, N-terminal AL538_RS05620 PF00570 HRDC domain AL538_RS05620 PF16124 RecQ zinc-binding AL538_RS05620 PF09382 RQC domain AL538_RS05620 PF00271 Helicase conserved C-terminal domain AL538_RS05620 PF00270 DEAD/DEAH box helicase AL538_RS05625 PF11798 IMS family HHH motif AL538_RS05625 PF00817 impB/mucB/samB family AL538_RS05625 PF11799 impB/mucB/samB family C-terminal domain AL538_RS05630 PF00072 Response regulator receiver domain AL538_RS05630 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS05640 PF02424 ApbE family AL538_RS05645 PF00175 Oxidoreductase NAD-binding domain AL538_RS05645 PF00111 2Fe-2S iron-sulfur cluster binding domain AL538_RS05645 PF00970 Oxidoreductase FAD-binding domain AL538_RS05650 PF02508 Rnf-Nqr subunit, membrane protein AL538_RS05655 PF02508 Rnf-Nqr subunit, membrane protein AL538_RS05660 PF04205 FMN-binding domain AL538_RS05665 PF03116 NQR2, RnfD, RnfE family AL538_RS05670 PF11973 NQRA C-terminal domain AL538_RS05670 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) AL538_RS05675 PF01722 BolA-like protein AL538_RS05680 PF05175 Methyltransferase small domain AL538_RS05690 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AL538_RS05695 PF07690 Major Facilitator Superfamily AL538_RS05705 PF04545 Sigma-70, region 4 AL538_RS05705 PF04542 Sigma-70 region 2 AL538_RS05720 PF03502 Nucleoside-specific channel-forming protein, Tsx AL538_RS05725 PF02558 Ketopantoate reductase PanE/ApbA AL538_RS05725 PF08546 Ketopantoate reductase PanE/ApbA C terminal AL538_RS05730 PF01965 DJ-1/PfpI family AL538_RS05735 PF00266 Aminotransferase class-V AL538_RS05740 PF02657 Fe-S metabolism associated domain AL538_RS05745 PF00899 ThiF family AL538_RS05750 PF03562 MltA specific insert domain AL538_RS05750 PF06725 3D domain AL538_RS05760 PF00696 Amino acid kinase family AL538_RS05760 PF00583 Acetyltransferase (GNAT) family AL538_RS05770 PF13538 UvrD-like helicase C-terminal domain AL538_RS05775 PF00580 UvrD/REP helicase N-terminal domain AL538_RS05775 PF12705 PD-(D/E)XK nuclease superfamily AL538_RS05775 PF13361 UvrD-like helicase C-terminal domain AL538_RS05780 PF17946 RecC C-terminal domain AL538_RS05785 PF00884 Sulfatase AL538_RS05785 PF11893 Domain of unknown function (DUF3413) AL538_RS05795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS05795 PF03466 LysR substrate binding domain AL538_RS05800 PF07130 YebG protein AL538_RS05815 PF14602 Hexapeptide repeat of succinyl-transferase AL538_RS05815 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle AL538_RS05820 PF03009 Glycerophosphoryl diester phosphodiesterase family AL538_RS05825 PF07690 Major Facilitator Superfamily AL538_RS05830 PF00230 Major intrinsic protein AL538_RS05835 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AL538_RS05835 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AL538_RS05840 PF00455 DeoR C terminal sensor domain AL538_RS05840 PF08220 DeoR-like helix-turn-helix domain AL538_RS05845 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AL538_RS05845 PF01266 FAD dependent oxidoreductase AL538_RS05850 PF01464 Transglycosylase SLT domain AL538_RS05850 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AL538_RS05870 PF01588 Putative tRNA binding domain AL538_RS05880 PF01263 Aldose 1-epimerase AL538_RS05885 PF10509 Galactokinase galactose-binding signature AL538_RS05885 PF08544 GHMP kinases C terminal AL538_RS05885 PF00288 GHMP kinases N terminal domain AL538_RS05890 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AL538_RS05890 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AL538_RS05895 PF16363 GDP-mannose 4,6 dehydratase AL538_RS05900 PF00905 Penicillin binding protein transpeptidase domain AL538_RS05900 PF03717 Penicillin-binding Protein dimerisation domain AL538_RS05910 PF00356 Bacterial regulatory proteins, lacI family AL538_RS05915 PF02929 Beta galactosidase small chain AL538_RS05915 PF02837 Glycosyl hydrolases family 2, sugar binding domain AL538_RS05915 PF00703 Glycosyl hydrolases family 2 AL538_RS05915 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AL538_RS05915 PF16353 Domain of unknown function(DUF4981) AL538_RS05920 PF04074 YhcH/YjgK/YiaL AL538_RS05925 PF13520 Amino acid permease AL538_RS05930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS05930 PF03466 LysR substrate binding domain AL538_RS05975 PF00437 Type II/IV secretion system protein AL538_RS05990 PF00263 Bacterial type II and III secretion system protein AL538_RS05990 PF13629 Pilus formation protein N terminal region AL538_RS05990 PF04972 BON domain AL538_RS06015 PF02805 Metal binding domain of Ada AL538_RS06015 PF12833 Helix-turn-helix domain AL538_RS06020 PF00501 AMP-binding enzyme AL538_RS06030 PF03466 LysR substrate binding domain AL538_RS06030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS06035 PF00679 Elongation factor G C-terminus AL538_RS06035 PF14492 Elongation Factor G, domain II AL538_RS06035 PF00009 Elongation factor Tu GTP binding domain AL538_RS06035 PF03764 Elongation factor G, domain IV AL538_RS06035 PF03144 Elongation factor Tu domain 2 AL538_RS06040 PF18073 Rubredoxin metal binding domain AL538_RS06050 PF18429 Domain of unknown function (DUF5609) AL538_RS06060 PF01048 Phosphorylase superfamily AL538_RS06065 PF01676 Metalloenzyme superfamily AL538_RS06070 PF00591 Glycosyl transferase family, a/b domain AL538_RS06070 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AL538_RS06070 PF02885 Glycosyl transferase family, helical bundle domain AL538_RS06075 PF01791 DeoC/LacD family aldolase AL538_RS06080 PF07662 Na+ dependent nucleoside transporter C-terminus AL538_RS06080 PF01773 Na+ dependent nucleoside transporter N-terminus AL538_RS06080 PF07670 Nucleoside recognition AL538_RS06085 PF01026 TatD related DNase AL538_RS06090 PF00009 Elongation factor Tu GTP binding domain AL538_RS06090 PF16658 Class II release factor RF3, C-terminal domain AL538_RS06090 PF03144 Elongation factor Tu domain 2 AL538_RS06095 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS06095 PF05230 MASE2 domain AL538_RS06115 PF13508 Acetyltransferase (GNAT) domain AL538_RS06120 PF02036 SCP-2 sterol transfer family AL538_RS06125 PF00563 EAL domain AL538_RS06125 PF03707 Bacterial signalling protein N terminal repeat AL538_RS06125 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS06130 PF01136 Peptidase family U32 AL538_RS06135 PF01136 Peptidase family U32 AL538_RS06140 PF01554 MatE AL538_RS06150 PF13181 Tetratricopeptide repeat AL538_RS06150 PF07719 Tetratricopeptide repeat AL538_RS06155 PF03725 3' exoribonuclease family, domain 2 AL538_RS06155 PF01138 3' exoribonuclease family, domain 1 AL538_RS06155 PF00575 S1 RNA binding domain AL538_RS06155 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AL538_RS06155 PF00013 KH domain AL538_RS06160 PF00312 Ribosomal protein S15 AL538_RS06165 PF09157 Pseudouridine synthase II TruB, C-terminal AL538_RS06165 PF01509 TruB family pseudouridylate synthase (N terminal domain) AL538_RS06165 PF16198 tRNA pseudouridylate synthase B C-terminal domain AL538_RS06170 PF02033 Ribosome-binding factor A AL538_RS06175 PF08364 Bacterial translation initiation factor IF-2 associated region AL538_RS06175 PF00009 Elongation factor Tu GTP binding domain AL538_RS06175 PF04760 Translation initiation factor IF-2, N-terminal region AL538_RS06175 PF11987 Translation-initiation factor 2 AL538_RS06180 PF00575 S1 RNA binding domain AL538_RS06180 PF13184 NusA-like KH domain AL538_RS06180 PF08529 NusA N-terminal domain AL538_RS06185 PF17384 RimP C-terminal SH3 domain AL538_RS06185 PF02576 RimP N-terminal domain AL538_RS06200 PF03840 Preprotein translocase SecG subunit AL538_RS06205 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AL538_RS06205 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AL538_RS06205 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AL538_RS06205 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AL538_RS06210 PF00809 Pterin binding enzyme AL538_RS06215 PF00004 ATPase family associated with various cellular activities (AAA) AL538_RS06215 PF17862 AAA+ lid domain AL538_RS06215 PF06480 FtsH Extracellular AL538_RS06215 PF01434 Peptidase family M41 AL538_RS06220 PF01728 FtsJ-like methyltransferase AL538_RS06225 PF01985 CRS1 / YhbY (CRM) domain AL538_RS06230 PF01272 Transcription elongation factor, GreA/GreB, C-term AL538_RS06230 PF03449 Transcription elongation factor, N-terminal AL538_RS06235 PF13609 Gram-negative porin AL538_RS06240 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AL538_RS06250 PF00579 tRNA synthetases class I (W and Y) AL538_RS06255 PF01551 Peptidase family M23 AL538_RS06255 PF01476 LysM domain AL538_RS06255 PF08525 Opacity-associated protein A N-terminal motif AL538_RS06260 PF00873 AcrB/AcrD/AcrF family AL538_RS06265 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL538_RS06270 PF01521 Iron-sulphur cluster biosynthesis AL538_RS06275 PF00202 Aminotransferase class-III AL538_RS06280 PF01594 AI-2E family transporter AL538_RS06285 PF08468 Methyltransferase small domain N-terminal AL538_RS06285 PF05175 Methyltransferase small domain AL538_RS06295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS06295 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS06295 PF00072 Response regulator receiver domain AL538_RS06295 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL538_RS06300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL538_RS06305 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS06310 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS06310 PF12911 N-terminal TM domain of oligopeptide transport permease C AL538_RS06315 PF00005 ABC transporter AL538_RS06315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL538_RS06320 PF00005 ABC transporter AL538_RS06320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL538_RS06330 PF01869 BadF/BadG/BcrA/BcrD ATPase family AL538_RS06335 PF00728 Glycosyl hydrolase family 20, catalytic domain AL538_RS06335 PF02838 Glycosyl hydrolase family 20, domain 2 AL538_RS06340 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain AL538_RS06340 PF06165 Glycosyltransferase family 36 AL538_RS06345 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AL538_RS06345 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AL538_RS06345 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AL538_RS06345 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AL538_RS06350 PF00005 ABC transporter AL538_RS06350 PF08402 TOBE domain AL538_RS06360 PF13416 Bacterial extracellular solute-binding protein AL538_RS06365 PF00909 Ammonium Transporter Family AL538_RS06370 PF00543 Nitrogen regulatory protein P-II AL538_RS06375 PF06062 Uncharacterised protein family (UPF0231) AL538_RS06380 PF00330 Aconitase family (aconitate hydratase) AL538_RS06380 PF06434 Aconitate hydratase 2 N-terminus AL538_RS06380 PF11791 Aconitate B N-terminal domain AL538_RS06385 PF01734 Patatin-like phospholipase AL538_RS06390 PF00905 Penicillin binding protein transpeptidase domain AL538_RS06390 PF14814 Bifunctional transglycosylase second domain AL538_RS06390 PF00912 Transglycosylase AL538_RS06395 PF00270 DEAD/DEAH box helicase AL538_RS06395 PF08482 ATP-dependent helicase C-terminal AL538_RS06395 PF04408 Helicase associated domain (HA2) AL538_RS06395 PF00271 Helicase conserved C-terminal domain AL538_RS06400 PF17746 SfsA N-terminal OB domain AL538_RS06400 PF03749 Sugar fermentation stimulation protein RE domain AL538_RS06405 PF01258 Prokaryotic dksA/traR C4-type zinc finger AL538_RS06410 PF00749 tRNA synthetases class I (E and Q), catalytic domain AL538_RS06415 PF01743 Poly A polymerase head domain AL538_RS06415 PF12626 Polymerase A arginine-rich C-terminus AL538_RS06415 PF12627 Probable RNA and SrmB- binding site of polymerase A AL538_RS06420 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AL538_RS06425 PF02548 Ketopantoate hydroxymethyltransferase AL538_RS06430 PF02569 Pantoate-beta-alanine ligase AL538_RS06435 PF03279 Bacterial lipid A biosynthesis acyltransferase AL538_RS06440 PF01061 ABC-2 type transporter AL538_RS06445 PF00005 ABC transporter AL538_RS06450 PF00916 Sulfate permease family AL538_RS06450 PF01740 STAS domain AL538_RS06455 PF00484 Carbonic anhydrase AL538_RS06460 PF00156 Phosphoribosyl transferase domain AL538_RS06465 PF00440 Bacterial regulatory proteins, tetR family AL538_RS06470 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AL538_RS06470 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL538_RS06475 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AL538_RS06475 PF00364 Biotin-requiring enzyme AL538_RS06475 PF02817 e3 binding domain AL538_RS06480 PF00456 Transketolase, thiamine diphosphate binding domain AL538_RS06480 PF17831 Pyruvate dehydrogenase E1 component middle domain AL538_RS06485 PF07729 FCD domain AL538_RS06485 PF00392 Bacterial regulatory proteins, gntR family AL538_RS06490 PF01510 N-acetylmuramoyl-L-alanine amidase AL538_RS06495 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AL538_RS06495 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AL538_RS06505 PF00114 Pilin (bacterial filament) AL538_RS06505 PF07963 Prokaryotic N-terminal methylation motif AL538_RS06510 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AL538_RS06510 PF00437 Type II/IV secretion system protein AL538_RS06515 PF00482 Type II secretion system (T2SS), protein F AL538_RS06520 PF06750 Bacterial Peptidase A24 N-terminal domain AL538_RS06520 PF01478 Type IV leader peptidase family AL538_RS06525 PF01121 Dephospho-CoA kinase AL538_RS06530 PF07072 Cell division protein AL538_RS06535 PF03884 DNA gyrase inhibitor YacG AL538_RS06540 PF01245 Ribosomal protein L19 AL538_RS06545 PF01746 tRNA (Guanine-1)-methyltransferase AL538_RS06550 PF05239 PRC-barrel domain AL538_RS06550 PF01782 RimM N-terminal domain AL538_RS06555 PF00886 Ribosomal protein S16 AL538_RS06560 PF02978 Signal peptide binding domain AL538_RS06560 PF00448 SRP54-type protein, GTPase domain AL538_RS06560 PF02881 SRP54-type protein, helical bundle domain AL538_RS06565 PF01578 Cytochrome C assembly protein AL538_RS06570 PF00571 CBS domain AL538_RS06570 PF03471 Transporter associated domain AL538_RS06570 PF01595 Cyclin M transmembrane N-terminal domain AL538_RS06575 PF02664 S-Ribosylhomocysteinase (LuxS) AL538_RS06585 PF04262 Glutamate-cysteine ligase AL538_RS06590 PF00675 Insulinase (Peptidase family M16) AL538_RS06590 PF05193 Peptidase M16 inactive domain AL538_RS06595 PF09335 SNARE associated Golgi protein AL538_RS06600 PF08240 Alcohol dehydrogenase GroES-like domain AL538_RS06600 PF00107 Zinc-binding dehydrogenase AL538_RS06605 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit AL538_RS06610 PF00682 HMGL-like AL538_RS06610 PF00364 Biotin-requiring enzyme AL538_RS06610 PF02436 Conserved carboxylase domain AL538_RS06615 PF04277 Oxaloacetate decarboxylase, gamma chain AL538_RS06670 PF02599 Global regulator protein family AL538_RS06675 PF00696 Amino acid kinase family AL538_RS06675 PF01842 ACT domain AL538_RS06675 PF13840 ACT domain AL538_RS06680 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AL538_RS06680 PF01411 tRNA synthetases class II (A) AL538_RS06680 PF02272 DHHA1 domain AL538_RS06685 PF02631 RecX family AL538_RS06690 PF00154 recA bacterial DNA recombination protein AL538_RS06695 PF02464 Competence-damaged protein AL538_RS06700 PF05192 MutS domain III AL538_RS06700 PF00488 MutS domain V AL538_RS06700 PF01624 MutS domain I AL538_RS06700 PF05190 MutS family domain IV AL538_RS06700 PF05188 MutS domain II AL538_RS06705 PF00140 Sigma-70 factor, region 1.2 AL538_RS06705 PF04542 Sigma-70 region 2 AL538_RS06705 PF04539 Sigma-70 region 3 AL538_RS06705 PF04545 Sigma-70, region 4 AL538_RS06710 PF01551 Peptidase family M23 AL538_RS06710 PF01476 LysM domain AL538_RS06720 PF01975 Survival protein SurE AL538_RS06725 PF01142 tRNA pseudouridine synthase D (TruD) AL538_RS06730 PF02542 YgbB family AL538_RS06735 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AL538_RS06740 PF04977 Septum formation initiator AL538_RS06745 PF00113 Enolase, C-terminal TIM barrel domain AL538_RS06745 PF03952 Enolase, N-terminal domain AL538_RS06750 PF00117 Glutamine amidotransferase class-I AL538_RS06750 PF06418 CTP synthase N-terminus AL538_RS06755 PF03819 MazG nucleotide pyrophosphohydrolase domain AL538_RS06760 PF04607 Region found in RelA / SpoT proteins AL538_RS06760 PF02824 TGS domain AL538_RS06760 PF13291 ACT domain AL538_RS06765 PF05958 tRNA (Uracil-5-)-methyltransferase AL538_RS06765 PF01938 TRAM domain AL538_RS06770 PF00672 HAMP domain AL538_RS06770 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AL538_RS06770 PF00072 Response regulator receiver domain AL538_RS06770 PF01627 Hpt domain AL538_RS06770 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS06770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS06775 PF01648 4'-phosphopantetheinyl transferase superfamily AL538_RS06780 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AL538_RS06785 PF02565 Recombination protein O C terminal AL538_RS06785 PF11967 Recombination protein O N terminal AL538_RS06790 PF07650 KH domain AL538_RS06790 PF01926 50S ribosome-binding GTPase AL538_RS06795 PF14622 Ribonuclease-III-like AL538_RS06795 PF00035 Double-stranded RNA binding motif AL538_RS06800 PF10502 Signal peptidase, peptidase S26 AL538_RS06805 PF06421 GTP-binding protein LepA C-terminus AL538_RS06805 PF00679 Elongation factor G C-terminus AL538_RS06805 PF00009 Elongation factor Tu GTP binding domain AL538_RS06805 PF03144 Elongation factor Tu domain 2 AL538_RS06815 PF17188 MucB/RseB C-terminal domain AL538_RS06815 PF03888 MucB/RseB N-terminal domain AL538_RS06820 PF03872 Anti sigma-E protein RseA, N-terminal domain AL538_RS06820 PF03873 Anti sigma-E protein RseA, C-terminal domain AL538_RS06825 PF08281 Sigma-70, region 4 AL538_RS06825 PF04542 Sigma-70 region 2 AL538_RS06830 PF00890 FAD binding domain AL538_RS06830 PF02910 Fumarate reductase flavoprotein C-term AL538_RS06840 PF03937 Flavinator of succinate dehydrogenase AL538_RS06860 PF01494 FAD binding domain AL538_RS06865 PF01494 FAD binding domain AL538_RS06870 PF03695 Uncharacterised protein family (UPF0149) AL538_RS06875 PF05164 Cell division protein ZapA AL538_RS06885 PF01812 5-formyltetrahydrofolate cyclo-ligase family AL538_RS06890 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AL538_RS06895 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AL538_RS06895 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AL538_RS06895 PF01842 ACT domain AL538_RS06900 PF04402 Protein of unknown function (DUF541) AL538_RS06905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS06905 PF03466 LysR substrate binding domain AL538_RS06910 PF01810 LysE type translocator AL538_RS06920 PF05552 Conserved TM helix AL538_RS06920 PF00924 Mechanosensitive ion channel AL538_RS06925 PF01116 Fructose-bisphosphate aldolase class-II AL538_RS06930 PF00162 Phosphoglycerate kinase AL538_RS06935 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AL538_RS06935 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AL538_RS06945 PF02779 Transketolase, pyrimidine binding domain AL538_RS06945 PF02780 Transketolase, C-terminal domain AL538_RS06945 PF00456 Transketolase, thiamine diphosphate binding domain AL538_RS06950 PF02773 S-adenosylmethionine synthetase, C-terminal domain AL538_RS06950 PF02772 S-adenosylmethionine synthetase, central domain AL538_RS06950 PF00438 S-adenosylmethionine synthetase, N-terminal domain AL538_RS06960 PF10263 SprT-like family AL538_RS06960 PF17283 SprT-like zinc ribbon domain AL538_RS06965 PF04231 Endonuclease I AL538_RS06970 PF04452 RNA methyltransferase AL538_RS06975 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AL538_RS06975 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AL538_RS06980 PF02622 Uncharacterized ACR, COG1678 AL538_RS06985 PF03652 Holliday junction resolvase AL538_RS06990 PF00437 Type II/IV secretion system protein AL538_RS06995 PF00437 Type II/IV secretion system protein AL538_RS07000 PF01168 Alanine racemase, N-terminal domain AL538_RS07005 PF14748 Pyrroline-5-carboxylate reductase dimerisation AL538_RS07005 PF03807 NADP oxidoreductase coenzyme F420-dependent AL538_RS07010 PF02325 YGGT family AL538_RS07015 PF02594 Uncharacterised ACR, YggU family COG1872 AL538_RS07025 PF01725 Ham1 family AL538_RS07030 PF04055 Radical SAM superfamily AL538_RS07030 PF06969 HemN C-terminal domain AL538_RS07035 PF04960 Glutaminase AL538_RS07040 PF02086 D12 class N6 adenine-specific DNA methyltransferase AL538_RS07045 PF02390 Putative methyltransferase AL538_RS07050 PF00730 HhH-GPD superfamily base excision DNA repair protein AL538_RS07050 PF00633 Helix-hairpin-helix motif AL538_RS07050 PF14815 NUDIX domain AL538_RS07055 PF04362 Bacterial Fe(2+) trafficking AL538_RS07060 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AL538_RS07060 PF01464 Transglycosylase SLT domain AL538_RS07100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS07100 PF17200 Single Cache domain 2 AL538_RS07100 PF00672 HAMP domain AL538_RS07130 PF00171 Aldehyde dehydrogenase family AL538_RS07175 PF00072 Response regulator receiver domain AL538_RS07180 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AL538_RS07180 PF00356 Bacterial regulatory proteins, lacI family AL538_RS07185 PF04794 YdjC-like protein AL538_RS07190 PF11975 Family 4 glycosyl hydrolase C-terminal domain AL538_RS07190 PF02056 Family 4 glycosyl hydrolase AL538_RS07195 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AL538_RS07200 PF02378 Phosphotransferase system, EIIC AL538_RS07205 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AL538_RS07225 PF00106 short chain dehydrogenase AL538_RS07235 PF03739 Lipopolysaccharide export system permease LptF/LptG AL538_RS07240 PF03739 Lipopolysaccharide export system permease LptF/LptG AL538_RS07245 PF00883 Cytosol aminopeptidase family, catalytic domain AL538_RS07245 PF02789 Cytosol aminopeptidase family, N-terminal domain AL538_RS07250 PF04364 DNA polymerase III chi subunit, HolC AL538_RS07255 PF08264 Anticodon-binding domain of tRNA AL538_RS07255 PF00133 tRNA synthetases class I (I, L, M and V) AL538_RS07255 PF10458 Valyl tRNA synthetase tRNA binding arm AL538_RS07265 PF00583 Acetyltransferase (GNAT) family AL538_RS07275 PF06877 Regulator of ribonuclease activity B AL538_RS07285 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AL538_RS07285 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AL538_RS07290 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AL538_RS07290 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AL538_RS07295 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain AL538_RS07295 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain AL538_RS07300 PF01042 Endoribonuclease L-PSP AL538_RS07305 PF01553 Acyltransferase AL538_RS07310 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AL538_RS07315 PF01722 BolA-like protein AL538_RS07325 PF05494 MlaC protein AL538_RS07330 PF02470 MlaD protein AL538_RS07335 PF02405 Permease MlaE AL538_RS07340 PF00005 ABC transporter AL538_RS07345 PF01699 Sodium/calcium exchanger protein AL538_RS07350 PF01380 SIS domain AL538_RS07350 PF00571 CBS domain AL538_RS07360 PF03968 OstA-like protein AL538_RS07365 PF00005 ABC transporter AL538_RS07365 PF12399 Branched-chain amino acid ATP-binding cassette transporter AL538_RS07370 PF04552 Sigma-54, DNA binding domain AL538_RS07370 PF04963 Sigma-54 factor, core binding domain AL538_RS07370 PF00309 Sigma-54 factor, Activator interacting domain (AID) AL538_RS07375 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AL538_RS07380 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AL538_RS07385 PF03668 P-loop ATPase protein family AL538_RS07390 PF00381 PTS HPr component phosphorylation site AL538_RS07395 PF01769 Divalent cation transporter AL538_RS07395 PF03448 MgtE intracellular N domain AL538_RS07395 PF00571 CBS domain AL538_RS07400 PF01523 Putative modulator of DNA gyrase AL538_RS07405 PF04751 Protein of unknown function (DUF615) AL538_RS07410 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AL538_RS07410 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AL538_RS07415 PF00849 RNA pseudouridylate synthase AL538_RS07425 PF00176 SNF2 family N-terminal domain AL538_RS07425 PF18337 RapA N-terminal Tudor like domain AL538_RS07425 PF18339 RapA N-terminal Tudor like domain 1 AL538_RS07425 PF00271 Helicase conserved C-terminal domain AL538_RS07425 PF12137 RNA polymerase recycling family C-terminal AL538_RS07430 PF13638 PIN domain AL538_RS07430 PF02562 PhoH-like protein AL538_RS07445 PF13116 Protein of unknown function AL538_RS07445 PF13502 AsmA-like C-terminal region AL538_RS07450 PF00575 S1 RNA binding domain AL538_RS07450 PF10150 Ribonuclease E/G family AL538_RS07455 PF02545 Maf-like protein AL538_RS07460 PF04093 rod shape-determining protein MreD AL538_RS07465 PF04085 rod shape-determining protein MreC AL538_RS07505 PF07963 Prokaryotic N-terminal methylation motif AL538_RS07515 PF00482 Type II secretion system (T2SS), protein F AL538_RS07520 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AL538_RS07520 PF00437 Type II/IV secretion system protein AL538_RS07530 PF13401 AAA domain AL538_RS07530 PF01471 Putative peptidoglycan binding domain AL538_RS07535 PF00263 Bacterial type II and III secretion system protein AL538_RS07535 PF03958 Bacterial type II/III secretion system short domain AL538_RS07555 PF00563 EAL domain AL538_RS07555 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS07555 PF17157 Gammaproteobacterial periplasmic sensor domain AL538_RS07560 PF00436 Single-strand binding protein family AL538_RS07565 PF00196 Bacterial regulatory proteins, luxR family AL538_RS07570 PF00483 Nucleotidyl transferase AL538_RS07585 PF00266 Aminotransferase class-V AL538_RS07590 PF01842 ACT domain AL538_RS07590 PF00696 Amino acid kinase family AL538_RS07595 PF02965 Vitamin B12 dependent methionine synthase, activation domain AL538_RS07595 PF02607 B12 binding domain AL538_RS07595 PF02310 B12 binding domain AL538_RS07595 PF02574 Homocysteine S-methyltransferase AL538_RS07595 PF00809 Pterin binding enzyme AL538_RS07600 PF00999 Sodium/hydrogen exchanger family AL538_RS07650 PF01507 Phosphoadenosine phosphosulfate reductase family AL538_RS07655 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AL538_RS07655 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AL538_RS07660 PF00258 Flavodoxin AL538_RS07660 PF00175 Oxidoreductase NAD-binding domain AL538_RS07660 PF00667 FAD binding domain AL538_RS07680 PF01207 Dihydrouridine synthase (Dus) AL538_RS07685 PF01475 Ferric uptake regulator family AL538_RS07695 PF00342 Phosphoglucose isomerase AL538_RS07700 PF01894 Uncharacterised protein family UPF0047 AL538_RS07710 PF00842 Alanine racemase, C-terminal domain AL538_RS07710 PF01168 Alanine racemase, N-terminal domain AL538_RS07715 PF03796 DnaB-like helicase C terminal domain AL538_RS07715 PF00772 DnaB-like helicase N terminal domain AL538_RS07725 PF03948 Ribosomal protein L9, C-terminal domain AL538_RS07725 PF01281 Ribosomal protein L9, N-terminal domain AL538_RS07730 PF01084 Ribosomal protein S18 AL538_RS07735 PF01250 Ribosomal protein S6 AL538_RS07740 PF00834 Ribulose-phosphate 3 epimerase family AL538_RS07745 PF02086 D12 class N6 adenine-specific DNA methyltransferase AL538_RS07755 PF01761 3-dehydroquinate synthase AL538_RS07760 PF01202 Shikimate kinase AL538_RS07765 PF00263 Bacterial type II and III secretion system protein AL538_RS07765 PF03958 Bacterial type II/III secretion system short domain AL538_RS07765 PF07660 Secretin and TonB N terminus short domain AL538_RS07765 PF11741 AMIN domain AL538_RS07770 PF04351 Pilus assembly protein, PilP AL538_RS07790 PF00905 Penicillin binding protein transpeptidase domain AL538_RS07790 PF17092 Penicillin-binding protein OB-like domain AL538_RS07790 PF00912 Transglycosylase AL538_RS07795 PF03466 LysR substrate binding domain AL538_RS07795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS07800 PF00462 Glutaredoxin AL538_RS07800 PF08534 Redoxin AL538_RS07805 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL538_RS07805 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AL538_RS07815 PF00206 Lyase AL538_RS07815 PF00583 Acetyltransferase (GNAT) family AL538_RS07815 PF14698 Argininosuccinate lyase C-terminal AL538_RS07820 PF00764 Arginosuccinate synthase AL538_RS07825 PF00696 Amino acid kinase family AL538_RS07830 PF01118 Semialdehyde dehydrogenase, NAD binding domain AL538_RS07830 PF02774 Semialdehyde dehydrogenase, dimerisation domain AL538_RS07835 PF07687 Peptidase dimerisation domain AL538_RS07835 PF01546 Peptidase family M20/M25/M40 AL538_RS07840 PF00311 Phosphoenolpyruvate carboxylase AL538_RS07850 PF02219 Methylenetetrahydrofolate reductase AL538_RS07855 PF00742 Homoserine dehydrogenase AL538_RS07855 PF03447 Homoserine dehydrogenase, NAD binding domain AL538_RS07855 PF00696 Amino acid kinase family AL538_RS07860 PF01053 Cys/Met metabolism PLP-dependent enzyme AL538_RS07865 PF01340 Met Apo-repressor, MetJ AL538_RS07870 PF00390 Malic enzyme, N-terminal domain AL538_RS07870 PF03949 Malic enzyme, NAD binding domain AL538_RS07875 PF00210 Ferritin-like domain AL538_RS07880 PF04324 BFD-like [2Fe-2S] binding domain AL538_RS07885 PF03143 Elongation factor Tu C-terminal domain AL538_RS07885 PF00009 Elongation factor Tu GTP binding domain AL538_RS07885 PF03144 Elongation factor Tu domain 2 AL538_RS07890 PF03764 Elongation factor G, domain IV AL538_RS07890 PF00009 Elongation factor Tu GTP binding domain AL538_RS07890 PF03144 Elongation factor Tu domain 2 AL538_RS07890 PF00679 Elongation factor G C-terminus AL538_RS07890 PF14492 Elongation Factor G, domain II AL538_RS07895 PF00177 Ribosomal protein S7p/S5e AL538_RS07900 PF00164 Ribosomal protein S12/S23 AL538_RS07905 PF04077 DsrH like protein AL538_RS07910 PF02635 DsrE/DsrF-like family AL538_RS07915 PF02635 DsrE/DsrF-like family AL538_RS07920 PF13309 HTH domain AL538_RS07920 PF08348 YheO-like PAS domain AL538_RS07925 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AL538_RS07925 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AL538_RS07935 PF04102 SlyX AL538_RS07940 PF01112 Asparaginase AL538_RS07945 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AL538_RS07955 PF02254 TrkA-N domain AL538_RS07955 PF00999 Sodium/hydrogen exchanger family AL538_RS07960 PF02525 Flavodoxin-like fold AL538_RS07965 PF00005 ABC transporter AL538_RS07965 PF12848 ABC transporter AL538_RS07975 PF00561 alpha/beta hydrolase fold AL538_RS07980 PF06794 Uncharacterised protein family (UPF0270) AL538_RS07985 PF00485 Phosphoribulokinase / Uridine kinase family AL538_RS07990 PF13545 Crp-like helix-turn-helix domain AL538_RS07990 PF00027 Cyclic nucleotide-binding domain AL538_RS08000 PF00171 Aldehyde dehydrogenase family AL538_RS08005 PF04958 Arginine N-succinyltransferase beta subunit AL538_RS08010 PF00202 Aminotransferase class-III AL538_RS08015 PF00117 Glutamine amidotransferase class-I AL538_RS08025 PF00267 Gram-negative porin AL538_RS08035 PF00579 tRNA synthetases class I (W and Y) AL538_RS08040 PF13419 Haloacid dehalogenase-like hydrolase AL538_RS08045 PF08032 RNA 2'-O ribose methyltransferase substrate binding AL538_RS08045 PF00588 SpoU rRNA Methylase family AL538_RS08050 PF00575 S1 RNA binding domain AL538_RS08050 PF00773 RNB domain AL538_RS08050 PF08206 Ribonuclease B OB domain AL538_RS08050 PF08461 Ribonuclease R winged-helix domain AL538_RS08050 PF17876 Cold shock domain AL538_RS08055 PF02082 Transcriptional regulator AL538_RS08060 PF00970 Oxidoreductase FAD-binding domain AL538_RS08060 PF00175 Oxidoreductase NAD-binding domain AL538_RS08060 PF00042 Globin AL538_RS08065 PF08238 Sel1 repeat AL538_RS08070 PF00709 Adenylosuccinate synthetase AL538_RS08075 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) AL538_RS08080 PF01145 SPFH domain / Band 7 family AL538_RS08085 PF12221 Bacterial membrane protein N terminal AL538_RS08085 PF01145 SPFH domain / Band 7 family AL538_RS08090 PF01926 50S ribosome-binding GTPase AL538_RS08090 PF16360 GTP-binding GTPase Middle Region AL538_RS08090 PF13167 GTP-binding GTPase N-terminal AL538_RS08095 PF17209 Hfq protein AL538_RS08105 PF08676 MutL C terminal dimerisation domain AL538_RS08105 PF01119 DNA mismatch repair protein, C-terminal domain AL538_RS08110 PF01520 N-acetylmuramoyl-L-alanine amidase AL538_RS08115 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AL538_RS08120 PF08331 Domain of unknown function (DUF1730) AL538_RS08185 PF00929 Exonuclease AL538_RS08190 PF03193 RsgA GTPase AL538_RS08195 PF02666 Phosphatidylserine decarboxylase AL538_RS08200 PF00939 Sodium:sulfate symporter transmembrane region AL538_RS08205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS08205 PF00672 HAMP domain AL538_RS08205 PF02743 Cache domain AL538_RS08215 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AL538_RS08215 PF01676 Metalloenzyme superfamily AL538_RS08220 PF00581 Rhodanese-like domain AL538_RS08225 PF02556 Preprotein translocase subunit SecB AL538_RS08230 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AL538_RS08230 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AL538_RS08235 PF00132 Bacterial transferase hexapeptide (six repeats) AL538_RS08235 PF06426 Serine acetyltransferase, N-terminal AL538_RS08240 PF01551 Peptidase family M23 AL538_RS08250 PF00440 Bacterial regulatory proteins, tetR family AL538_RS08250 PF08360 QacR-like protein, C-terminal region AL538_RS08260 PF00152 tRNA synthetases class II (D, K and N) AL538_RS08265 PF00890 FAD binding domain AL538_RS08265 PF02910 Fumarate reductase flavoprotein C-term AL538_RS08270 PF13183 4Fe-4S dicluster domain AL538_RS08270 PF13085 2Fe-2S iron-sulfur cluster binding domain AL538_RS08275 PF02300 Fumarate reductase subunit C AL538_RS08280 PF02313 Fumarate reductase subunit D AL538_RS08295 PF01132 Elongation factor P (EF-P) OB domain AL538_RS08295 PF09285 Elongation factor P, C-terminal AL538_RS08295 PF08207 Elongation factor P (EF-P) KOW-like domain AL538_RS08300 PF04055 Radical SAM superfamily AL538_RS08305 PF02308 MgtC family AL538_RS08330 PF02796 Helix-turn-helix domain of resolvase AL538_RS08330 PF00239 Resolvase, N terminal domain AL538_RS08340 PF00118 TCP-1/cpn60 chaperonin family AL538_RS08345 PF00166 Chaperonin 10 Kd subunit AL538_RS08350 PF01554 MatE AL538_RS08355 PF00365 Phosphofructokinase AL538_RS08360 PF01545 Cation efflux family AL538_RS08360 PF16916 Dimerisation domain of Zinc Transporter AL538_RS08365 PF07813 LTXXQ motif family protein AL538_RS08370 PF00486 Transcriptional regulatory protein, C terminal AL538_RS08370 PF00072 Response regulator receiver domain AL538_RS08375 PF16527 Two-component sensor protein CpxA, periplasmic domain AL538_RS08375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS08375 PF00672 HAMP domain AL538_RS08375 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS08380 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AL538_RS08380 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AL538_RS08385 PF00588 SpoU rRNA Methylase family AL538_RS08390 PF04186 FxsA cytoplasmic membrane protein AL538_RS08395 PF00206 Lyase AL538_RS08395 PF10415 Fumarase C C-terminus AL538_RS08400 PF03605 Anaerobic c4-dicarboxylate membrane transporter AL538_RS08405 PF11412 Disulphide bond corrector protein DsbC AL538_RS08405 PF02683 Cytochrome C biogenesis protein transmembrane region AL538_RS08410 PF00196 Bacterial regulatory proteins, luxR family AL538_RS08410 PF00072 Response regulator receiver domain AL538_RS08415 PF01914 MarC family integral membrane protein AL538_RS08425 PF00474 Sodium:solute symporter family AL538_RS08440 PF10415 Fumarase C C-terminus AL538_RS08440 PF00206 Lyase AL538_RS08445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS08445 PF01627 Hpt domain AL538_RS08445 PF00072 Response regulator receiver domain AL538_RS08445 PF00672 HAMP domain AL538_RS08445 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS08450 PF12832 MFS_1 like family AL538_RS08465 PF13193 AMP-binding enzyme C-terminal domain AL538_RS08465 PF00501 AMP-binding enzyme AL538_RS08465 PF16177 Acetyl-coenzyme A synthetase N-terminus AL538_RS08470 PF01220 Dehydroquinase class II AL538_RS08475 PF00364 Biotin-requiring enzyme AL538_RS08480 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AL538_RS08480 PF00289 Biotin carboxylase, N-terminal domain AL538_RS08480 PF02785 Biotin carboxylase C-terminal domain AL538_RS08490 PF01207 Dihydrouridine synthase (Dus) AL538_RS08495 PF02954 Bacterial regulatory protein, Fis family AL538_RS08500 PF08448 PAS fold AL538_RS08500 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS08550 PF08240 Alcohol dehydrogenase GroES-like domain AL538_RS08550 PF00107 Zinc-binding dehydrogenase AL538_RS08555 PF01276 Orn/Lys/Arg decarboxylase, major domain AL538_RS08555 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AL538_RS08555 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AL538_RS08560 PF13520 Amino acid permease AL538_RS08570 PF18500 CadC C-terminal domain 1 AL538_RS08570 PF00486 Transcriptional regulatory protein, C terminal AL538_RS08575 PF13411 MerR HTH family regulatory protein AL538_RS08585 PF02142 MGS-like domain AL538_RS08585 PF01808 AICARFT/IMPCHase bienzyme AL538_RS08590 PF02843 Phosphoribosylglycinamide synthetase, C domain AL538_RS08590 PF02844 Phosphoribosylglycinamide synthetase, N domain AL538_RS08590 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AL538_RS08600 PF00216 Bacterial DNA-binding protein AL538_RS08605 PF01595 Cyclin M transmembrane N-terminal domain AL538_RS08605 PF00571 CBS domain AL538_RS08610 PF04222 Protein of unknown function (DUF416) AL538_RS08615 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AL538_RS08620 PF03167 Uracil DNA glycosylase superfamily AL538_RS08625 PF01208 Uroporphyrinogen decarboxylase (URO-D) AL538_RS08640 PF00293 NUDIX domain AL538_RS08640 PF09297 NADH pyrophosphatase zinc ribbon domain AL538_RS08645 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ AL538_RS08650 PF04983 RNA polymerase Rpb1, domain 3 AL538_RS08650 PF05000 RNA polymerase Rpb1, domain 4 AL538_RS08650 PF04997 RNA polymerase Rpb1, domain 1 AL538_RS08650 PF00623 RNA polymerase Rpb1, domain 2 AL538_RS08650 PF04998 RNA polymerase Rpb1, domain 5 AL538_RS08655 PF04560 RNA polymerase Rpb2, domain 7 AL538_RS08655 PF00562 RNA polymerase Rpb2, domain 6 AL538_RS08655 PF10385 RNA polymerase beta subunit external 1 domain AL538_RS08655 PF04563 RNA polymerase beta subunit AL538_RS08655 PF04561 RNA polymerase Rpb2, domain 2 AL538_RS08655 PF04565 RNA polymerase Rpb2, domain 3 AL538_RS08660 PF16320 Ribosomal protein L7/L12 dimerisation domain AL538_RS08660 PF00542 Ribosomal protein L7/L12 C-terminal domain AL538_RS08665 PF00466 Ribosomal protein L10 AL538_RS08670 PF00687 Ribosomal protein L1p/L10e family AL538_RS08675 PF00298 Ribosomal protein L11, RNA binding domain AL538_RS08675 PF03946 Ribosomal protein L11, N-terminal domain AL538_RS08680 PF00467 KOW motif AL538_RS08680 PF02357 Transcription termination factor nusG AL538_RS08685 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AL538_RS08690 PF00009 Elongation factor Tu GTP binding domain AL538_RS08690 PF03144 Elongation factor Tu domain 2 AL538_RS08690 PF03143 Elongation factor Tu C-terminal domain AL538_RS08715 PF00485 Phosphoribulokinase / Uridine kinase family AL538_RS08720 PF03099 Biotin/lipoate A/B protein ligase family AL538_RS08720 PF02237 Biotin protein ligase C terminal domain AL538_RS08720 PF08279 HTH domain AL538_RS08725 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AL538_RS08725 PF01565 FAD binding domain AL538_RS08735 PF13091 PLD-like domain AL538_RS08810 PF01177 Asp/Glu/Hydantoin racemase AL538_RS08820 PF00593 TonB dependent receptor AL538_RS08820 PF07715 TonB-dependent Receptor Plug Domain AL538_RS08825 PF05958 tRNA (Uracil-5-)-methyltransferase AL538_RS08880 PF06803 Protein of unknown function (DUF1232) AL538_RS08895 PF04002 RadC-like JAB domain AL538_RS08900 PF12728 Helix-turn-helix domain AL538_RS08900 PF00145 C-5 cytosine-specific DNA methylase AL538_RS08915 PF00589 Phage integrase family AL538_RS08915 PF13356 Arm DNA-binding domain AL538_RS08925 PF00440 Bacterial regulatory proteins, tetR family AL538_RS08930 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL538_RS08930 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AL538_RS08935 PF01554 MatE AL538_RS08945 PF01726 LexA DNA binding domain AL538_RS08945 PF00717 Peptidase S24-like AL538_RS08950 PF01553 Acyltransferase AL538_RS08955 PF01040 UbiA prenyltransferase family AL538_RS08960 PF04345 Chorismate lyase AL538_RS08965 PF03748 Flagellar basal body-associated protein FliL AL538_RS08970 PF01694 Rhomboid family AL538_RS08970 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease AL538_RS08975 PF00581 Rhodanese-like domain AL538_RS08980 PF00140 Sigma-70 factor, region 1.2 AL538_RS08980 PF04542 Sigma-70 region 2 AL538_RS08980 PF04545 Sigma-70, region 4 AL538_RS08985 PF18075 FtsX extracellular domain AL538_RS08990 PF00005 ABC transporter AL538_RS08995 PF00448 SRP54-type protein, GTPase domain AL538_RS08995 PF02881 SRP54-type protein, helical bundle domain AL538_RS09010 PF01914 MarC family integral membrane protein AL538_RS09030 PF10694 Protein of unknown function (DUF2500) AL538_RS09055 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AL538_RS09055 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AL538_RS09060 PF01022 Bacterial regulatory protein, arsR family AL538_RS09065 PF08668 HDOD domain AL538_RS09065 PF00563 EAL domain AL538_RS09070 PF01810 LysE type translocator AL538_RS09075 PF12146 Serine aminopeptidase, S33 AL538_RS09095 PF03942 DTW domain AL538_RS09100 PF08495 FIST N domain AL538_RS09100 PF10442 FIST C domain AL538_RS09100 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS09100 PF00563 EAL domain AL538_RS09105 PF13419 Haloacid dehalogenase-like hydrolase AL538_RS09110 PF00589 Phage integrase family AL538_RS09110 PF02899 Phage integrase, N-terminal SAM-like domain AL538_RS09120 PF01678 Diaminopimelate epimerase AL538_RS09125 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AL538_RS09125 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AL538_RS09135 PF01491 Frataxin-like domain AL538_RS09140 PF01295 Adenylate cyclase, class-I AL538_RS09140 PF12633 Adenylate cyclase NT domain AL538_RS09145 PF03900 Porphobilinogen deaminase, C-terminal domain AL538_RS09145 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AL538_RS09150 PF02602 Uroporphyrinogen-III synthase HemD AL538_RS09155 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase AL538_RS09160 PF07219 HemY protein N-terminus AL538_RS09195 PF00175 Oxidoreductase NAD-binding domain AL538_RS09200 PF00111 2Fe-2S iron-sulfur cluster binding domain AL538_RS09205 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AL538_RS09215 PF07498 Rho termination factor, N-terminal domain AL538_RS09215 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AL538_RS09215 PF07497 Rho termination factor, RNA-binding domain AL538_RS09220 PF00085 Thioredoxin AL538_RS09225 PF00270 DEAD/DEAH box helicase AL538_RS09225 PF00271 Helicase conserved C-terminal domain AL538_RS09230 PF02541 Ppx/GppA phosphatase family AL538_RS09235 PF02592 Putative vitamin uptake transporter AL538_RS09245 PF09382 RQC domain AL538_RS09245 PF00270 DEAD/DEAH box helicase AL538_RS09245 PF00271 Helicase conserved C-terminal domain AL538_RS09245 PF00570 HRDC domain AL538_RS09245 PF16124 RecQ zinc-binding AL538_RS09250 PF00892 EamA-like transporter family AL538_RS09260 PF01810 LysE type translocator AL538_RS09275 PF00580 UvrD/REP helicase N-terminal domain AL538_RS09275 PF13361 UvrD-like helicase C-terminal domain AL538_RS09285 PF05114 Protein of unknown function (DUF692) AL538_RS09305 PF07690 Major Facilitator Superfamily AL538_RS09310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS09310 PF03466 LysR substrate binding domain AL538_RS09315 PF00557 Metallopeptidase family M24 AL538_RS09315 PF01321 Creatinase/Prolidase N-terminal domain AL538_RS09315 PF00557 Metallopeptidase family M24 AL538_RS09315 PF01321 Creatinase/Prolidase N-terminal domain AL538_RS09320 PF06968 Biotin and Thiamin Synthesis associated domain AL538_RS09320 PF04055 Radical SAM superfamily AL538_RS09325 PF05690 Thiazole biosynthesis protein ThiG AL538_RS09330 PF02597 ThiS family AL538_RS09335 PF00899 ThiF family AL538_RS09340 PF02581 Thiamine monophosphate synthase AL538_RS09345 PF01964 Radical SAM ThiC family AL538_RS09345 PF13667 ThiC-associated domain AL538_RS09350 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AL538_RS09355 PF00394 Multicopper oxidase AL538_RS09355 PF07731 Multicopper oxidase AL538_RS09355 PF07732 Multicopper oxidase AL538_RS09400 PF00132 Bacterial transferase hexapeptide (six repeats) AL538_RS09410 PF08501 Shikimate dehydrogenase substrate binding domain AL538_RS09410 PF01488 Shikimate / quinate 5-dehydrogenase AL538_RS09410 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AL538_RS09415 PF01218 Coproporphyrinogen III oxidase AL538_RS09420 PF01300 Telomere recombination AL538_RS09425 PF00731 AIR carboxylase AL538_RS09430 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AL538_RS09430 PF02222 ATP-grasp domain AL538_RS09435 PF01396 Topoisomerase DNA binding C4 zinc finger AL538_RS09440 PF04361 Protein of unknown function (DUF494) AL538_RS09445 PF02481 DNA recombination-mediator protein A AL538_RS09445 PF17782 DprA winged helix domain AL538_RS09455 PF01327 Polypeptide deformylase AL538_RS09460 PF00551 Formyl transferase AL538_RS09460 PF02911 Formyl transferase, C-terminal domain AL538_RS09465 PF01189 16S rRNA methyltransferase RsmB/F AL538_RS09465 PF01029 NusB family AL538_RS09470 PF02080 TrkA-C domain AL538_RS09470 PF02254 TrkA-N domain AL538_RS09475 PF02386 Cation transport protein AL538_RS09485 PF03006 Haemolysin-III related AL538_RS09490 PF07070 SpoOM protein AL538_RS09495 PF06288 Protein of unknown function (DUF1040) AL538_RS09500 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AL538_RS09500 PF13746 4Fe-4S dicluster domain AL538_RS09500 PF12801 4Fe-4S binding domain AL538_RS09505 PF01636 Phosphotransferase enzyme family AL538_RS09510 PF01323 DSBA-like thioredoxin domain AL538_RS09515 PF01553 Acyltransferase AL538_RS09525 PF08448 PAS fold AL538_RS09525 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS09530 PF13335 Magnesium chelatase, subunit ChlI C-terminal AL538_RS09530 PF01078 Magnesium chelatase, subunit ChlI AL538_RS09535 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AL538_RS09535 PF00205 Thiamine pyrophosphate enzyme, central domain AL538_RS09535 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AL538_RS09545 PF01063 Amino-transferase class IV AL538_RS09550 PF00920 Dehydratase family AL538_RS09555 PF00585 C-terminal regulatory domain of Threonine dehydratase AL538_RS09555 PF00291 Pyridoxal-phosphate dependent enzyme AL538_RS09560 PF03466 LysR substrate binding domain AL538_RS09560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS09565 PF07690 Major Facilitator Superfamily AL538_RS09570 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL538_RS09575 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS09580 PF00132 Bacterial transferase hexapeptide (six repeats) AL538_RS09580 PF12804 MobA-like NTP transferase domain AL538_RS09585 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AL538_RS09585 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AL538_RS09590 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AL538_RS09590 PF02874 ATP synthase alpha/beta family, beta-barrel domain AL538_RS09595 PF00231 ATP synthase AL538_RS09600 PF02874 ATP synthase alpha/beta family, beta-barrel domain AL538_RS09600 PF00306 ATP synthase alpha/beta chain, C terminal domain AL538_RS09600 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AL538_RS09605 PF00213 ATP synthase delta (OSCP) subunit AL538_RS09610 PF00430 ATP synthase B/B' CF(0) AL538_RS09615 PF00137 ATP synthase subunit C AL538_RS09620 PF00119 ATP synthase A chain AL538_RS09625 PF03899 ATP synthase I chain AL538_RS09630 PF17762 HTH domain found in ParB protein AL538_RS09630 PF02195 ParB-like nuclease domain AL538_RS09635 PF13614 AAA domain AL538_RS09640 PF02527 rRNA small subunit methyltransferase G AL538_RS09645 PF13932 GidA associated domain AL538_RS09645 PF01134 Glucose inhibited division protein A AL538_RS09650 PF00258 Flavodoxin AL538_RS09655 PF10396 GTP-binding protein TrmE N-terminus AL538_RS09655 PF12631 MnmE helical domain AL538_RS09655 PF01926 50S ribosome-binding GTPase AL538_RS09660 PF14849 YidC periplasmic domain AL538_RS09660 PF02096 60Kd inner membrane protein AL538_RS09665 PF00825 Ribonuclease P AL538_RS09670 PF00468 Ribosomal protein L34 AL538_RS09675 PF00005 ABC transporter AL538_RS09680 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS09685 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL538_RS09690 PF11638 DnaA N-terminal domain AL538_RS09690 PF08299 Bacterial dnaA protein helix-turn-helix AL538_RS09690 PF00308 Bacterial dnaA protein AL538_RS09695 PF02768 DNA polymerase III beta subunit, C-terminal domain AL538_RS09695 PF02767 DNA polymerase III beta subunit, central domain AL538_RS09695 PF00712 DNA polymerase III beta subunit, N-terminal domain AL538_RS09700 PF02463 RecF/RecN/SMC N terminal domain AL538_RS09705 PF00204 DNA gyrase B AL538_RS09705 PF00986 DNA gyrase B subunit, carboxyl terminus AL538_RS09705 PF18053 DNA gyrase B subunit insert domain AL538_RS09705 PF01751 Toprim domain AL538_RS09705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS09710 PF00011 Hsp20/alpha crystallin family AL538_RS09715 PF00155 Aminotransferase class I and II AL538_RS09720 PF00128 Alpha amylase, catalytic domain AL538_RS09725 PF05746 DALR anticodon binding domain AL538_RS09725 PF02092 Glycyl-tRNA synthetase beta subunit AL538_RS09730 PF02091 Glycyl-tRNA synthetase alpha subunit AL538_RS09735 PF01169 Uncharacterized protein family UPF0016 AL538_RS09745 PF01206 Sulfurtransferase TusA AL538_RS09755 PF03466 LysR substrate binding domain AL538_RS09755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS09760 PF08240 Alcohol dehydrogenase GroES-like domain AL538_RS09760 PF00107 Zinc-binding dehydrogenase AL538_RS09765 PF00108 Thiolase, N-terminal domain AL538_RS09765 PF02803 Thiolase, C-terminal domain AL538_RS09770 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AL538_RS09770 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AL538_RS09770 PF00378 Enoyl-CoA hydratase/isomerase AL538_RS09775 PF09186 Domain of unknown function (DUF1949) AL538_RS09775 PF01205 Uncharacterized protein family UPF0029 AL538_RS09780 PF02386 Cation transport protein AL538_RS09785 PF12724 Flavodoxin domain AL538_RS09825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS09825 PF03466 LysR substrate binding domain AL538_RS09830 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AL538_RS09830 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AL538_RS09835 PF04380 Membrane fusogenic activity AL538_RS09840 PF00873 AcrB/AcrD/AcrF family AL538_RS09845 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL538_RS09850 PF00440 Bacterial regulatory proteins, tetR family AL538_RS09850 PF08359 YsiA-like protein, C-terminal region AL538_RS09855 PF00580 UvrD/REP helicase N-terminal domain AL538_RS09855 PF13361 UvrD-like helicase C-terminal domain AL538_RS09860 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AL538_RS09890 PF13419 Haloacid dehalogenase-like hydrolase AL538_RS09900 PF00005 ABC transporter AL538_RS09900 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL538_RS09905 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL538_RS09910 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS09915 PF12911 N-terminal TM domain of oligopeptide transport permease C AL538_RS09915 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS09945 PF00069 Protein kinase domain AL538_RS09950 PF00356 Bacterial regulatory proteins, lacI family AL538_RS09950 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AL538_RS09955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS09955 PF03466 LysR substrate binding domain AL538_RS09960 PF00893 Small Multidrug Resistance protein AL538_RS09965 PF00893 Small Multidrug Resistance protein AL538_RS09975 PF00920 Dehydratase family AL538_RS09980 PF01202 Shikimate kinase AL538_RS09985 PF02447 GntP family permease AL538_RS09990 PF01081 KDPG and KHG aldolase AL538_RS09995 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AL538_RS09995 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL538_RS10010 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AL538_RS10020 PF01432 Peptidase family M3 AL538_RS10025 PF01037 Lrp/AsnC ligand binding domain AL538_RS10030 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS10030 PF00563 EAL domain AL538_RS10030 PF08448 PAS fold AL538_RS10035 PF04445 Putative SAM-dependent methyltransferase AL538_RS10045 PF00892 EamA-like transporter family AL538_RS10050 PF00582 Universal stress protein family AL538_RS10060 PF00210 Ferritin-like domain AL538_RS10065 PF10625 Universal stress protein B (UspB) AL538_RS10075 PF03707 Bacterial signalling protein N terminal repeat AL538_RS10075 PF00563 EAL domain AL538_RS10075 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS10085 PF02646 RmuC family AL538_RS10090 PF01209 ubiE/COQ5 methyltransferase family AL538_RS10095 PF02036 SCP-2 sterol transfer family AL538_RS10100 PF03109 ABC1 family AL538_RS10105 PF02416 mttA/Hcf106 family AL538_RS10110 PF02416 mttA/Hcf106 family AL538_RS10115 PF00902 Sec-independent protein translocase protein (TatC) AL538_RS10120 PF01026 TatD related DNase AL538_RS10125 PF00490 Delta-aminolevulinic acid dehydratase AL538_RS10135 PF00476 DNA polymerase family A AL538_RS10135 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AL538_RS10135 PF01612 3'-5' exonuclease AL538_RS10135 PF01367 5'-3' exonuclease, C-terminal SAM fold AL538_RS10140 PF01926 50S ribosome-binding GTPase AL538_RS10145 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AL538_RS10155 PF04220 Der GTPase activator (YihI) AL538_RS10165 PF06969 HemN C-terminal domain AL538_RS10165 PF04055 Radical SAM superfamily AL538_RS10170 PF00962 Adenosine/AMP deaminase AL538_RS10175 PF03707 Bacterial signalling protein N terminal repeat AL538_RS10175 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS10175 PF00563 EAL domain AL538_RS10180 PF00158 Sigma-54 interaction domain AL538_RS10180 PF02954 Bacterial regulatory protein, Fis family AL538_RS10180 PF00072 Response regulator receiver domain AL538_RS10185 PF00989 PAS fold AL538_RS10185 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS10185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS10195 PF00120 Glutamine synthetase, catalytic domain AL538_RS10195 PF03951 Glutamine synthetase, beta-Grasp domain AL538_RS10200 PF00009 Elongation factor Tu GTP binding domain AL538_RS10200 PF03144 Elongation factor Tu domain 2 AL538_RS10200 PF00679 Elongation factor G C-terminus AL538_RS10215 PF03631 Virulence factor BrkB AL538_RS10220 PF02580 D-Tyr-tRNA(Tyr) deacylase AL538_RS10225 PF09500 Putative thioesterase (yiiD_Cterm) AL538_RS10225 PF00583 Acetyltransferase (GNAT) family AL538_RS10235 PF01293 Phosphoenolpyruvate carboxykinase AL538_RS10240 PF01430 Hsp33 protein AL538_RS10245 PF01479 S4 domain AL538_RS10250 PF11356 Type II secretion system protein C AL538_RS10255 PF00263 Bacterial type II and III secretion system protein AL538_RS10255 PF03958 Bacterial type II/III secretion system short domain AL538_RS10260 PF00437 Type II/IV secretion system protein AL538_RS10265 PF00482 Type II secretion system (T2SS), protein F AL538_RS10270 PF08334 Type II secretion system (T2SS), protein G AL538_RS10270 PF07963 Prokaryotic N-terminal methylation motif AL538_RS10275 PF12019 Type II transport protein GspH AL538_RS10280 PF07963 Prokaryotic N-terminal methylation motif AL538_RS10280 PF02501 Type II secretion system (T2SS), protein I AL538_RS10285 PF07963 Prokaryotic N-terminal methylation motif AL538_RS10285 PF11612 Type II secretion system (T2SS), protein J AL538_RS10290 PF03934 Type II secretion system (T2SS), protein K AL538_RS10295 PF12693 GspL periplasmic domain AL538_RS10295 PF05134 Type II secretion system (T2SS), protein L AL538_RS10300 PF04612 Type II secretion system (T2SS), protein M AL538_RS10305 PF01203 Type II secretion system (T2SS), protein N AL538_RS10310 PF00459 Inositol monophosphatase family AL538_RS10315 PF00293 NUDIX domain AL538_RS10320 PF01106 NifU-like domain AL538_RS10320 PF01521 Iron-sulphur cluster biosynthesis AL538_RS10325 PF00156 Phosphoribosyl transferase domain AL538_RS10330 PF00561 alpha/beta hydrolase fold AL538_RS10340 PF16921 Tex protein YqgF-like domain AL538_RS10340 PF09371 Tex-like protein N-terminal domain AL538_RS10340 PF00575 S1 RNA binding domain AL538_RS10340 PF17674 HHH domain AL538_RS10350 PF03449 Transcription elongation factor, N-terminal AL538_RS10350 PF01272 Transcription elongation factor, GreA/GreB, C-term AL538_RS10355 PF00072 Response regulator receiver domain AL538_RS10355 PF00486 Transcriptional regulatory protein, C terminal AL538_RS10360 PF00672 HAMP domain AL538_RS10360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS10360 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS10365 PF00860 Permease family AL538_RS10370 PF00326 Prolyl oligopeptidase family AL538_RS10375 PF00270 DEAD/DEAH box helicase AL538_RS10375 PF17191 RecG wedge domain AL538_RS10375 PF00271 Helicase conserved C-terminal domain AL538_RS10380 PF00588 SpoU rRNA Methylase family AL538_RS10380 PF12105 SpoU, rRNA methylase, C-terminal AL538_RS10385 PF02824 TGS domain AL538_RS10385 PF04607 Region found in RelA / SpoT proteins AL538_RS10385 PF13291 ACT domain AL538_RS10390 PF01192 RNA polymerase Rpb6 AL538_RS10395 PF00625 Guanylate kinase AL538_RS10410 PF02472 Biopolymer transport protein ExbD/TolR AL538_RS10415 PF01618 MotA/TolQ/ExbB proton channel family AL538_RS10430 PF07715 TonB-dependent Receptor Plug Domain AL538_RS10430 PF00593 TonB dependent receptor AL538_RS10435 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS10440 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS10440 PF12911 N-terminal TM domain of oligopeptide transport permease C AL538_RS10445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL538_RS10450 PF00005 ABC transporter AL538_RS10450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL538_RS10455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL538_RS10455 PF00005 ABC transporter AL538_RS10470 PF00892 EamA-like transporter family AL538_RS10480 PF00486 Transcriptional regulatory protein, C terminal AL538_RS10480 PF00072 Response regulator receiver domain AL538_RS10485 PF03755 YicC-like family, N-terminal region AL538_RS10485 PF08340 Domain of unknown function (DUF1732) AL538_RS10490 PF03725 3' exoribonuclease family, domain 2 AL538_RS10490 PF01138 3' exoribonuclease family, domain 1 AL538_RS10495 PF00156 Phosphoribosyl transferase domain AL538_RS10500 PF03279 Bacterial lipid A biosynthesis acyltransferase AL538_RS10505 PF00440 Bacterial regulatory proteins, tetR family AL538_RS10510 PF04127 DNA / pantothenate metabolism flavoprotein AL538_RS10510 PF02441 Flavoprotein AL538_RS10515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS10515 PF17200 Single Cache domain 2 AL538_RS10515 PF00672 HAMP domain AL538_RS10520 PF04002 RadC-like JAB domain AL538_RS10525 PF00830 Ribosomal L28 family AL538_RS10530 PF00471 Ribosomal protein L33 AL538_RS10535 PF00884 Sulfatase AL538_RS10545 PF06827 Zinc finger found in FPG and IleRS AL538_RS10545 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AL538_RS10545 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AL538_RS10550 PF01467 Cytidylyltransferase-like AL538_RS10555 PF05686 Glycosyl transferase family 90 AL538_RS10560 PF00535 Glycosyl transferase family 2 AL538_RS10565 PF00535 Glycosyl transferase family 2 AL538_RS10570 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AL538_RS10575 PF01219 Prokaryotic diacylglycerol kinase AL538_RS10585 PF16363 GDP-mannose 4,6 dehydratase AL538_RS10590 PF00483 Nucleotidyl transferase AL538_RS10595 PF05523 WxcM-like, C-terminal AL538_RS10605 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AL538_RS10620 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AL538_RS10625 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AL538_RS10635 PF03279 Bacterial lipid A biosynthesis acyltransferase AL538_RS10640 PF01370 NAD dependent epimerase/dehydratase family AL538_RS10645 PF06082 Exopolysaccharide biosynthesis protein YbjH AL538_RS10685 PF12804 MobA-like NTP transferase domain AL538_RS10695 PF04991 LicD family AL538_RS10705 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AL538_RS10710 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AL538_RS10720 PF00535 Glycosyl transferase family 2 AL538_RS10725 PF00535 Glycosyl transferase family 2 AL538_RS10730 PF02397 Bacterial sugar transferase AL538_RS10735 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AL538_RS10735 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AL538_RS10735 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AL538_RS10740 PF00753 Metallo-beta-lactamase superfamily AL538_RS10740 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AL538_RS10740 PF10996 Beta-Casp domain AL538_RS10745 PF00121 Triosephosphate isomerase AL538_RS10765 PF00455 DeoR C terminal sensor domain AL538_RS10765 PF08220 DeoR-like helix-turn-helix domain AL538_RS10770 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AL538_RS10775 PF06005 Cell division protein ZapB AL538_RS10780 PF03737 Aldolase/RraA AL538_RS10785 PF01040 UbiA prenyltransferase family AL538_RS10790 PF00004 ATPase family associated with various cellular activities (AAA) AL538_RS10790 PF07724 AAA domain (Cdc48 subfamily) AL538_RS10795 PF00227 Proteasome subunit AL538_RS10805 PF00356 Bacterial regulatory proteins, lacI family AL538_RS10810 PF17764 3′ DNA-binding domain (3′BD) AL538_RS10810 PF00271 Helicase conserved C-terminal domain AL538_RS10810 PF00270 DEAD/DEAH box helicase AL538_RS10810 PF18074 Primosomal protein N C-terminal domain AL538_RS10810 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AL538_RS10815 PF01197 Ribosomal protein L31 AL538_RS10820 PF00338 Ribosomal protein S10p/S20e AL538_RS10825 PF00297 Ribosomal protein L3 AL538_RS10830 PF00573 Ribosomal protein L4/L1 family AL538_RS10835 PF00276 Ribosomal protein L23 AL538_RS10840 PF03947 Ribosomal Proteins L2, C-terminal domain AL538_RS10840 PF00181 Ribosomal Proteins L2, RNA binding domain AL538_RS10845 PF00203 Ribosomal protein S19 AL538_RS10850 PF00237 Ribosomal protein L22p/L17e AL538_RS10855 PF07650 KH domain AL538_RS10855 PF00189 Ribosomal protein S3, C-terminal domain AL538_RS10860 PF00252 Ribosomal protein L16p/L10e AL538_RS10865 PF00831 Ribosomal L29 protein AL538_RS10870 PF00366 Ribosomal protein S17 AL538_RS10875 PF00238 Ribosomal protein L14p/L23e AL538_RS10880 PF00467 KOW motif AL538_RS10880 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AL538_RS10885 PF00673 ribosomal L5P family C-terminus AL538_RS10885 PF00281 Ribosomal protein L5 AL538_RS10890 PF00253 Ribosomal protein S14p/S29e AL538_RS10895 PF00410 Ribosomal protein S8 AL538_RS10900 PF00347 Ribosomal protein L6 AL538_RS10905 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AL538_RS10910 PF00333 Ribosomal protein S5, N-terminal domain AL538_RS10910 PF03719 Ribosomal protein S5, C-terminal domain AL538_RS10915 PF00327 Ribosomal protein L30p/L7e AL538_RS10920 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AL538_RS10925 PF00344 SecY translocase AL538_RS10930 PF00444 Ribosomal protein L36 AL538_RS10935 PF00416 Ribosomal protein S13/S18 AL538_RS10940 PF00411 Ribosomal protein S11 AL538_RS10945 PF00163 Ribosomal protein S4/S9 N-terminal domain AL538_RS10945 PF01479 S4 domain AL538_RS10950 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AL538_RS10950 PF01000 RNA polymerase Rpb3/RpoA insert domain AL538_RS10950 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AL538_RS10955 PF01196 Ribosomal protein L17 AL538_RS10965 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AL538_RS10965 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AL538_RS10980 PF13673 Acetyltransferase (GNAT) domain AL538_RS10985 PF00270 DEAD/DEAH box helicase AL538_RS10985 PF00271 Helicase conserved C-terminal domain AL538_RS10985 PF03880 DbpA RNA binding domain AL538_RS10995 PF00149 Calcineurin-like phosphoesterase AL538_RS10995 PF02872 5'-nucleotidase, C-terminal domain AL538_RS11000 PF10414 Sirohaem synthase dimerisation region AL538_RS11000 PF14824 Sirohaem biosynthesis protein central AL538_RS11000 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AL538_RS11005 PF01507 Phosphoadenosine phosphosulfate reductase family AL538_RS11010 PF00009 Elongation factor Tu GTP binding domain AL538_RS11015 PF03600 Citrate transporter AL538_RS11015 PF02080 TrkA-C domain AL538_RS11040 PF00005 ABC transporter AL538_RS11050 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) AL538_RS11060 PF01625 Peptide methionine sulfoxide reductase AL538_RS11065 PF07244 Surface antigen variable number repeat AL538_RS11065 PF01103 Surface antigen AL538_RS11065 PF17243 POTRA domain TamA domain 1 AL538_RS11070 PF04357 TamB, inner membrane protein subunit of TAM complex AL538_RS11075 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like AL538_RS11085 PF00719 Inorganic pyrophosphatase AL538_RS11090 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AL538_RS11095 PF08245 Mur ligase middle domain AL538_RS11095 PF01225 Mur ligase family, catalytic domain AL538_RS11095 PF02875 Mur ligase family, glutamate ligase domain AL538_RS11100 PF02441 Flavoprotein AL538_RS11110 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS11115 PF00005 ABC transporter AL538_RS11135 PF01316 Arginine repressor, DNA binding domain AL538_RS11135 PF02863 Arginine repressor, C-terminal domain AL538_RS11140 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AL538_RS11140 PF00056 lactate/malate dehydrogenase, NAD binding domain AL538_RS11150 PF00348 Polyprenyl synthetase AL538_RS11155 PF00829 Ribosomal prokaryotic L21 protein AL538_RS11160 PF01016 Ribosomal L27 protein AL538_RS11165 PF01018 GTP1/OBG AL538_RS11165 PF01926 50S ribosome-binding GTPase AL538_RS11170 PF06738 Putative threonine/serine exporter AL538_RS11175 PF12821 Threonine/Serine exporter, ThrE AL538_RS11180 PF00186 Dihydrofolate reductase AL538_RS11185 PF00149 Calcineurin-like phosphoesterase AL538_RS11190 PF04379 ApaG domain AL538_RS11195 PF00398 Ribosomal RNA adenine dimethylase AL538_RS11200 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AL538_RS11205 PF09312 SurA N-terminal domain AL538_RS11210 PF04453 LPS transport system D AL538_RS11210 PF03968 OstA-like protein AL538_RS11215 PF05099 Tellurite resistance protein TerB AL538_RS11215 PF00226 DnaJ domain AL538_RS11225 PF00694 Aconitase C-terminal domain AL538_RS11230 PF00330 Aconitase family (aconitate hydratase) AL538_RS11235 PF00180 Isocitrate/isopropylmalate dehydrogenase AL538_RS11240 PF08502 LeuA allosteric (dimerisation) domain AL538_RS11240 PF00682 HMGL-like AL538_RS11250 PF01569 PAP2 superfamily AL538_RS11260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS11260 PF03466 LysR substrate binding domain AL538_RS11265 PF00501 AMP-binding enzyme AL538_RS11270 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AL538_RS11270 PF00205 Thiamine pyrophosphate enzyme, central domain AL538_RS11270 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AL538_RS11275 PF10369 Small subunit of acetolactate synthase AL538_RS11280 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS11280 PF17158 Membrane-associated sensor, integral membrane domain AL538_RS11290 PF00224 Pyruvate kinase, barrel domain AL538_RS11290 PF02887 Pyruvate kinase, alpha/beta domain AL538_RS11295 PF08220 DeoR-like helix-turn-helix domain AL538_RS11295 PF00455 DeoR C terminal sensor domain AL538_RS11300 PF01380 SIS domain AL538_RS11315 PF00072 Response regulator receiver domain AL538_RS11315 PF00486 Transcriptional regulatory protein, C terminal AL538_RS11320 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS11320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS11320 PF00672 HAMP domain AL538_RS11325 PF13419 Haloacid dehalogenase-like hydrolase AL538_RS11330 PF05068 Mannitol repressor AL538_RS11335 PF01232 Mannitol dehydrogenase Rossmann domain AL538_RS11335 PF08125 Mannitol dehydrogenase C-terminal domain AL538_RS11340 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AL538_RS11340 PF02378 Phosphotransferase system, EIIC AL538_RS11340 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AL538_RS11370 PF04545 Sigma-70, region 4 AL538_RS11370 PF04542 Sigma-70 region 2 AL538_RS11370 PF00140 Sigma-70 factor, region 1.2 AL538_RS11370 PF03979 Sigma-70 factor, region 1.1 AL538_RS11370 PF04546 Sigma-70, non-essential region AL538_RS11370 PF04539 Sigma-70 region 3 AL538_RS11375 PF01807 CHC2 zinc finger AL538_RS11375 PF08275 DNA primase catalytic core, N-terminal domain AL538_RS11375 PF08278 DNA primase DnaG DnaB-binding AL538_RS11375 PF10410 DnaB-helicase binding domain of primase AL538_RS11380 PF09424 Yqey-like protein AL538_RS11385 PF01165 Ribosomal protein S21 AL538_RS11390 PF00814 Glycoprotease family AL538_RS11395 PF00561 alpha/beta hydrolase fold AL538_RS11405 PF02152 Dihydroneopterin aldolase AL538_RS11410 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AL538_RS11415 PF02673 Bacitracin resistance protein BacA AL538_RS11420 PF01966 HD domain AL538_RS11420 PF12627 Probable RNA and SrmB- binding site of polymerase A AL538_RS11420 PF01743 Poly A polymerase head domain AL538_RS11425 PF13401 AAA domain AL538_RS11425 PF01471 Putative peptidoglycan binding domain AL538_RS11435 PF08239 Bacterial SH3 domain AL538_RS11440 PF01384 Phosphate transporter family AL538_RS11445 PF01865 Protein of unknown function DUF47 AL538_RS11450 PF01928 CYTH domain AL538_RS11455 PF07885 Ion channel AL538_RS11460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS11460 PF02743 Cache domain AL538_RS11460 PF00672 HAMP domain AL538_RS11465 PF03710 Glutamate-ammonia ligase adenylyltransferase AL538_RS11465 PF08335 GlnD PII-uridylyltransferase AL538_RS11470 PF00294 pfkB family carbohydrate kinase AL538_RS11470 PF01467 Cytidylyltransferase-like AL538_RS11475 PF02321 Outer membrane efflux protein AL538_RS11480 PF00293 NUDIX domain AL538_RS11485 PF06853 Protein of unknown function (DUF1249) AL538_RS11490 PF00149 Calcineurin-like phosphoesterase AL538_RS11495 PF05728 Uncharacterised protein family (UPF0227) AL538_RS11500 PF00986 DNA gyrase B subunit, carboxyl terminus AL538_RS11500 PF00204 DNA gyrase B AL538_RS11500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS11500 PF01751 Toprim domain AL538_RS11505 PF00521 DNA gyrase/topoisomerase IV, subunit A AL538_RS11505 PF03989 DNA gyrase C-terminal domain, beta-propeller AL538_RS11510 PF13180 PDZ domain AL538_RS11515 PF00595 PDZ domain AL538_RS11525 PF06295 Protein of unknown function (DUF1043) AL538_RS11530 PF03969 AFG1-like ATPase AL538_RS11535 PF00572 Ribosomal protein L13 AL538_RS11540 PF00380 Ribosomal protein S9/S16 AL538_RS11545 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AL538_RS11545 PF00355 Rieske [2Fe-2S] domain AL538_RS11550 PF00032 Cytochrome b(C-terminal)/b6/petD AL538_RS11550 PF00033 Cytochrome b/b6/petB AL538_RS11555 PF02167 Cytochrome C1 family AL538_RS11560 PF00043 Glutathione S-transferase, C-terminal domain AL538_RS11560 PF02798 Glutathione S-transferase, N-terminal domain AL538_RS11565 PF04386 Stringent starvation protein B AL538_RS11570 PF04972 BON domain AL538_RS11575 PF13580 SIS domain AL538_RS11580 PF02021 Uncharacterised protein family UPF0102 AL538_RS11585 PF04348 LppC putative lipoprotein AL538_RS11590 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AL538_RS11600 PF01795 MraW methylase family AL538_RS11605 PF04999 Cell division protein FtsL AL538_RS11610 PF03717 Penicillin-binding Protein dimerisation domain AL538_RS11610 PF00905 Penicillin binding protein transpeptidase domain AL538_RS11615 PF08245 Mur ligase middle domain AL538_RS11615 PF01225 Mur ligase family, catalytic domain AL538_RS11615 PF02875 Mur ligase family, glutamate ligase domain AL538_RS11620 PF01225 Mur ligase family, catalytic domain AL538_RS11620 PF02875 Mur ligase family, glutamate ligase domain AL538_RS11620 PF08245 Mur ligase middle domain AL538_RS11625 PF00953 Glycosyl transferase family 4 AL538_RS11625 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AL538_RS11630 PF08245 Mur ligase middle domain AL538_RS11630 PF02875 Mur ligase family, glutamate ligase domain AL538_RS11635 PF01098 Cell cycle protein AL538_RS11640 PF04101 Glycosyltransferase family 28 C-terminal domain AL538_RS11640 PF03033 Glycosyltransferase family 28 N-terminal domain AL538_RS11645 PF01225 Mur ligase family, catalytic domain AL538_RS11645 PF02875 Mur ligase family, glutamate ligase domain AL538_RS11645 PF08245 Mur ligase middle domain AL538_RS11650 PF03799 Cell division protein FtsQ AL538_RS11650 PF08478 POTRA domain, FtsQ-type AL538_RS11655 PF02491 SHS2 domain inserted in FTSA AL538_RS11660 PF12327 FtsZ family, C-terminal domain AL538_RS11660 PF00091 Tubulin/FtsZ family, GTPase domain AL538_RS11665 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AL538_RS11670 PF07517 SecA DEAD-like domain AL538_RS11670 PF02810 SEC-C motif AL538_RS11670 PF07516 SecA Wing and Scaffold domain AL538_RS11670 PF01043 SecA preprotein cross-linking domain AL538_RS11675 PF00293 NUDIX domain AL538_RS11680 PF05173 Dihydrodipicolinate reductase, C-terminus AL538_RS11680 PF01113 Dihydrodipicolinate reductase, N-terminus AL538_RS11685 PF00117 Glutamine amidotransferase class-I AL538_RS11685 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AL538_RS11690 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AL538_RS11690 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AL538_RS11690 PF02142 MGS-like domain AL538_RS11710 PF01925 Sulfite exporter TauE/SafE AL538_RS11715 PF03466 LysR substrate binding domain AL538_RS11715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS11720 PF03458 UPF0126 domain AL538_RS11725 PF01497 Periplasmic binding protein AL538_RS11735 PF01048 Phosphorylase superfamily AL538_RS11745 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL538_RS11745 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AL538_RS11750 PF00310 Glutamine amidotransferases class-II AL538_RS11750 PF01645 Conserved region in glutamate synthase AL538_RS11750 PF01493 GXGXG motif AL538_RS11750 PF04898 Glutamate synthase central domain AL538_RS11755 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL538_RS11755 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AL538_RS11760 PF01493 GXGXG motif AL538_RS11760 PF01645 Conserved region in glutamate synthase AL538_RS11760 PF04898 Glutamate synthase central domain AL538_RS11760 PF00310 Glutamine amidotransferases class-II AL538_RS11765 PF04055 Radical SAM superfamily AL538_RS11765 PF16199 Radical_SAM C-terminal domain AL538_RS11770 PF00563 EAL domain AL538_RS11770 PF00360 Phytochrome region AL538_RS11770 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS11770 PF01590 GAF domain AL538_RS11780 PF00072 Response regulator receiver domain AL538_RS11780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS11780 PF01627 Hpt domain AL538_RS11780 PF18415 Histidine kinase receptor ArcB trans-membrane domain AL538_RS11780 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS11780 PF00989 PAS fold AL538_RS11790 PF00072 Response regulator receiver domain AL538_RS11790 PF00486 Transcriptional regulatory protein, C terminal AL538_RS11800 PF03737 Aldolase/RraA AL538_RS11810 PF03447 Homoserine dehydrogenase, NAD binding domain AL538_RS11810 PF00742 Homoserine dehydrogenase AL538_RS11810 PF13840 ACT domain AL538_RS11810 PF01842 ACT domain AL538_RS11810 PF00696 Amino acid kinase family AL538_RS11815 PF08544 GHMP kinases C terminal AL538_RS11815 PF00288 GHMP kinases N terminal domain AL538_RS11820 PF00291 Pyridoxal-phosphate dependent enzyme AL538_RS11820 PF14821 Threonine synthase N terminus AL538_RS11825 PF03358 NADPH-dependent FMN reductase AL538_RS11830 PF01228 Glycine radical AL538_RS11835 PF01261 Xylose isomerase-like TIM barrel AL538_RS11840 PF03167 Uracil DNA glycosylase superfamily AL538_RS11855 PF01235 Sodium:alanine symporter family AL538_RS11860 PF03883 Peroxide stress protein YaaA AL538_RS11870 PF00270 DEAD/DEAH box helicase AL538_RS11870 PF00271 Helicase conserved C-terminal domain AL538_RS11875 PF05175 Methyltransferase small domain AL538_RS11880 PF05525 Branched-chain amino acid transport protein AL538_RS11885 PF00258 Flavodoxin AL538_RS11890 PF02899 Phage integrase, N-terminal SAM-like domain AL538_RS11890 PF00589 Phage integrase family AL538_RS11895 PF10411 Disulfide bond isomerase protein N-terminus AL538_RS11895 PF13098 Thioredoxin-like domain AL538_RS11900 PF02272 DHHA1 domain AL538_RS11900 PF17768 RecJ OB domain AL538_RS11900 PF01368 DHH family AL538_RS11905 PF00472 RF-1 domain AL538_RS11905 PF03462 PCRF domain AL538_RS11910 PF01336 OB-fold nucleic acid binding domain AL538_RS11910 PF00152 tRNA synthetases class II (D, K and N) AL538_RS11915 PF02954 Bacterial regulatory protein, Fis family AL538_RS11915 PF00072 Response regulator receiver domain AL538_RS11915 PF00158 Sigma-54 interaction domain AL538_RS11925 PF00248 Aldo/keto reductase family AL538_RS11935 PF02976 DNA mismatch repair enzyme MutH AL538_RS11940 PF00293 NUDIX domain AL538_RS11945 PF02896 PEP-utilising enzyme, TIM barrel domain AL538_RS11945 PF05524 PEP-utilising enzyme, N-terminal AL538_RS11945 PF01590 GAF domain AL538_RS11945 PF00391 PEP-utilising enzyme, mobile domain AL538_RS11950 PF01925 Sulfite exporter TauE/SafE AL538_RS11955 PF01790 Prolipoprotein diacylglyceryl transferase AL538_RS11960 PF00303 Thymidylate synthase AL538_RS11965 PF02690 Na+/Pi-cotransporter AL538_RS11970 PF03466 LysR substrate binding domain AL538_RS11970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS11975 PF01022 Bacterial regulatory protein, arsR family AL538_RS11980 PF01649 Ribosomal protein S20 AL538_RS11985 PF03023 Lipid II flippase MurJ AL538_RS11990 PF01687 Riboflavin kinase AL538_RS11990 PF06574 FAD synthetase AL538_RS11995 PF08264 Anticodon-binding domain of tRNA AL538_RS11995 PF06827 Zinc finger found in FPG and IleRS AL538_RS11995 PF00133 tRNA synthetases class I (I, L, M and V) AL538_RS12000 PF01252 Signal peptidase (SPase) II AL538_RS12005 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AL538_RS12010 PF02401 LytB protein AL538_RS12015 PF00072 Response regulator receiver domain AL538_RS12015 PF04397 LytTr DNA-binding domain AL538_RS12020 PF07694 5TMR of 5TMR-LYT AL538_RS12020 PF06580 Histidine kinase AL538_RS12025 PF02554 Carbon starvation protein CstA AL538_RS12040 PF01380 SIS domain AL538_RS12045 PF03702 Anhydro-N-acetylmuramic acid kinase AL538_RS12050 PF00933 Glycosyl hydrolase family 3 N terminal domain AL538_RS12055 PF00793 DAHP synthetase I family AL538_RS12060 PF02153 Prephenate dehydrogenase AL538_RS12060 PF01817 Chorismate mutase type II AL538_RS12065 PF04225 Opacity-associated protein A LysM-like domain AL538_RS12065 PF01551 Peptidase family M23 AL538_RS12070 PF07238 PilZ domain AL538_RS12075 PF12848 ABC transporter AL538_RS12075 PF00005 ABC transporter AL538_RS12080 PF14718 Soluble lytic murein transglycosylase L domain AL538_RS12080 PF01464 Transglycosylase SLT domain AL538_RS12085 PF01371 Trp repressor protein AL538_RS12090 PF01931 Protein of unknown function DUF84 AL538_RS12095 PF00800 Prephenate dehydratase AL538_RS12095 PF01817 Chorismate mutase type II AL538_RS12100 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AL538_RS12105 PF01464 Transglycosylase SLT domain AL538_RS12110 PF13525 Outer membrane lipoprotein AL538_RS12115 PF00849 RNA pseudouridylate synthase AL538_RS12115 PF01479 S4 domain AL538_RS12120 PF02578 Multi-copper polyphenol oxidoreductase laccase AL538_RS12125 PF00004 ATPase family associated with various cellular activities (AAA) AL538_RS12125 PF07724 AAA domain (Cdc48 subfamily) AL538_RS12125 PF17871 AAA lid domain AL538_RS12125 PF10431 C-terminal, D2-small domain, of ClpB protein AL538_RS12125 PF02861 Clp amino terminal domain, pathogenicity island component AL538_RS12170 PF03411 Penicillin-insensitive murein endopeptidase AL538_RS12180 PF00037 4Fe-4S binding domain AL538_RS12185 PF01136 Peptidase family U32 AL538_RS12185 PF16325 Peptidase family U32 C-terminal domain AL538_RS12190 PF04381 Putative exonuclease, RdgC AL538_RS12195 PF00486 Transcriptional regulatory protein, C terminal AL538_RS12195 PF00072 Response regulator receiver domain AL538_RS12200 PF11808 Phosphate regulon sensor protein PhoR AL538_RS12200 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS12200 PF00989 PAS fold AL538_RS12200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS12205 PF12849 PBP superfamily domain AL538_RS12210 PF02541 Ppx/GppA phosphatase family AL538_RS12215 PF17941 Polyphosphate kinase C-terminal domain 1 AL538_RS12215 PF13089 Polyphosphate kinase N-terminal domain AL538_RS12215 PF13090 Polyphosphate kinase C-terminal domain 2 AL538_RS12215 PF02503 Polyphosphate kinase middle domain AL538_RS12220 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS12225 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS12230 PF00005 ABC transporter AL538_RS12235 PF01895 PhoU domain AL538_RS12250 PF03466 LysR substrate binding domain AL538_RS12250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS12255 PF03976 Polyphosphate kinase 2 (PPK2) AL538_RS12260 PF03932 CutC family AL538_RS12265 PF10417 C-terminal domain of 1-Cys peroxiredoxin AL538_RS12265 PF00578 AhpC/TSA family AL538_RS12270 PF03466 LysR substrate binding domain AL538_RS12270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS12275 PF01274 Malate synthase AL538_RS12280 PF00463 Isocitrate lyase family AL538_RS12285 PF00571 CBS domain AL538_RS12300 PF02547 Queuosine biosynthesis protein AL538_RS12305 PF01702 Queuine tRNA-ribosyltransferase AL538_RS12310 PF02699 Preprotein translocase subunit AL538_RS12315 PF02355 Protein export membrane protein AL538_RS12315 PF07549 SecD/SecF GG Motif AL538_RS12315 PF13721 SecD export protein N-terminal TM region AL538_RS12320 PF07549 SecD/SecF GG Motif AL538_RS12320 PF02355 Protein export membrane protein AL538_RS12335 PF00459 Inositol monophosphatase family AL538_RS12340 PF00588 SpoU rRNA Methylase family AL538_RS12345 PF02082 Transcriptional regulator AL538_RS12350 PF00266 Aminotransferase class-V AL538_RS12355 PF01592 NifU-like N terminal domain AL538_RS12360 PF01521 Iron-sulphur cluster biosynthesis AL538_RS12365 PF00226 DnaJ domain AL538_RS12365 PF07743 HSCB C-terminal oligomerisation domain AL538_RS12370 PF00012 Hsp70 protein AL538_RS12375 PF00111 2Fe-2S iron-sulfur cluster binding domain AL538_RS12380 PF04384 Iron-sulphur cluster assembly AL538_RS12385 PF12404 Peptidase AL538_RS12385 PF00883 Cytosol aminopeptidase family, catalytic domain AL538_RS12390 PF00334 Nucleoside diphosphate kinase AL538_RS12395 PF04055 Radical SAM superfamily AL538_RS12400 PF13464 Domain of unknown function (DUF4115) AL538_RS12405 PF04551 GcpE protein AL538_RS12410 PF03129 Anticodon binding domain AL538_RS12410 PF13393 Histidyl-tRNA synthetase AL538_RS12415 PF09976 Tetratricopeptide repeat-like domain AL538_RS12420 PF13360 PQQ-like domain AL538_RS12425 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AL538_RS12425 PF01926 50S ribosome-binding GTPase AL538_RS12435 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS12435 PF13185 GAF domain AL538_RS12440 PF02601 Exonuclease VII, large subunit AL538_RS12440 PF13742 OB-fold nucleic acid binding domain AL538_RS12445 PF00478 IMP dehydrogenase / GMP reductase domain AL538_RS12445 PF00571 CBS domain AL538_RS12450 PF00117 Glutamine amidotransferase class-I AL538_RS12450 PF00958 GMP synthase C terminal domain AL538_RS12450 PF02540 NAD synthase AL538_RS12455 PF03553 Na+/H+ antiporter family AL538_RS12460 PF06483 Chitinase C AL538_RS12460 PF00704 Glycosyl hydrolases family 18 AL538_RS12465 PF01184 GPR1/FUN34/yaaH family AL538_RS12470 PF01235 Sodium:alanine symporter family AL538_RS12475 PF01266 FAD dependent oxidoreductase AL538_RS12480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS12480 PF03466 LysR substrate binding domain AL538_RS12495 PF01053 Cys/Met metabolism PLP-dependent enzyme AL538_RS12500 PF01521 Iron-sulphur cluster biosynthesis AL538_RS12505 PF01458 Uncharacterized protein family (UPF0051) AL538_RS12510 PF00005 ABC transporter AL538_RS12515 PF01458 Uncharacterized protein family (UPF0051) AL538_RS12520 PF00266 Aminotransferase class-V AL538_RS12525 PF02657 Fe-S metabolism associated domain AL538_RS12535 PF00202 Aminotransferase class-III AL538_RS12555 PF12805 FUSC-like inner membrane protein yccS AL538_RS12560 PF03466 LysR substrate binding domain AL538_RS12560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS12615 PF04002 RadC-like JAB domain AL538_RS12675 PF13356 Arm DNA-binding domain AL538_RS12675 PF00589 Phage integrase family AL538_RS12685 PF01668 SmpB protein AL538_RS12690 PF03364 Polyketide cyclase / dehydrase and lipid transport AL538_RS12695 PF03658 RnfH family Ubiquitin AL538_RS12700 PF04355 SmpA / OmlA family AL538_RS12705 PF02463 RecF/RecN/SMC N terminal domain AL538_RS12715 PF01513 ATP-NAD kinase AL538_RS12720 PF01025 GrpE AL538_RS12725 PF00375 Sodium:dicarboxylate symporter family AL538_RS12730 PF00012 Hsp70 protein AL538_RS12735 PF00226 DnaJ domain AL538_RS12735 PF01556 DnaJ C terminal domain AL538_RS12735 PF00684 DnaJ central domain AL538_RS12740 PF07963 Prokaryotic N-terminal methylation motif AL538_RS12740 PF00114 Pilin (bacterial filament) AL538_RS12745 PF07963 Prokaryotic N-terminal methylation motif AL538_RS12745 PF00114 Pilin (bacterial filament) AL538_RS12765 PF03806 AbgT putative transporter family AL538_RS12770 PF14437 MafB19-like deaminase AL538_RS12775 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL538_RS12775 PF01464 Transglycosylase SLT domain AL538_RS12780 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AL538_RS12780 PF02769 AIR synthase related protein, C-terminal domain AL538_RS12780 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AL538_RS12810 PF01546 Peptidase family M20/M25/M40 AL538_RS12810 PF07687 Peptidase dimerisation domain AL538_RS12815 PF00860 Permease family AL538_RS12820 PF00156 Phosphoribosyl transferase domain AL538_RS12825 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) AL538_RS12830 PF07417 Sigma factor-binding transcriptional regulator Crl AL538_RS12835 PF00696 Amino acid kinase family AL538_RS12835 PF01472 PUA domain AL538_RS12840 PF00171 Aldehyde dehydrogenase family AL538_RS12845 PF03477 ATP cone domain AL538_RS12850 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AL538_RS12850 PF01872 RibD C-terminal domain AL538_RS12855 PF00677 Lumazine binding domain AL538_RS12860 PF00925 GTP cyclohydrolase II AL538_RS12860 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AL538_RS12865 PF00885 6,7-dimethyl-8-ribityllumazine synthase AL538_RS12870 PF01029 NusB family AL538_RS12875 PF02769 AIR synthase related protein, C-terminal domain AL538_RS12875 PF00586 AIR synthase related protein, N-terminal domain AL538_RS12880 PF04608 Phosphatidylglycerophosphatase A AL538_RS12885 PF02780 Transketolase, C-terminal domain AL538_RS12885 PF02779 Transketolase, pyrimidine binding domain AL538_RS12885 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AL538_RS12890 PF00348 Polyprenyl synthetase AL538_RS12895 PF02609 Exonuclease VII small subunit AL538_RS12900 PF01618 MotA/TolQ/ExbB proton channel family AL538_RS12905 PF13677 Membrane MotB of proton-channel complex MotA/MotB AL538_RS12905 PF13677 Membrane MotB of proton-channel complex MotA/MotB AL538_RS12905 PF00691 OmpA family AL538_RS12905 PF00691 OmpA family AL538_RS12910 PF02926 THUMP domain AL538_RS12910 PF02568 Thiamine biosynthesis protein (ThiI) AL538_RS12915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS12915 PF03466 LysR substrate binding domain AL538_RS12925 PF04241 Protein of unknown function (DUF423) AL538_RS12930 PF01728 FtsJ-like methyltransferase AL538_RS12930 PF18125 RlmM ferredoxin-like domain AL538_RS12935 PF01223 DNA/RNA non-specific endonuclease AL538_RS12940 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AL538_RS12940 PF01367 5'-3' exonuclease, C-terminal SAM fold AL538_RS12945 PF11892 Domain of unknown function (DUF3412) AL538_RS12945 PF03641 Possible lysine decarboxylase AL538_RS12945 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases AL538_RS12950 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS12960 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AL538_RS12960 PF14489 QueF-like protein AL538_RS12965 PF07348 Syd protein (SUKH-2) AL538_RS12970 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) AL538_RS12975 PF00149 Calcineurin-like phosphoesterase AL538_RS12975 PF02872 5'-nucleotidase, C-terminal domain AL538_RS12985 PF03180 NLPA lipoprotein AL538_RS12990 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS12995 PF00005 ABC transporter AL538_RS12995 PF09383 NIL domain AL538_RS13005 PF00356 Bacterial regulatory proteins, lacI family AL538_RS13010 PF00367 phosphotransferase system, EIIB AL538_RS13010 PF02378 Phosphotransferase system, EIIC AL538_RS13015 PF00128 Alpha amylase, catalytic domain AL538_RS13015 PF16657 Maltogenic Amylase, C-terminal domain AL538_RS13030 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AL538_RS13030 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AL538_RS13035 PF00464 Serine hydroxymethyltransferase AL538_RS13040 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AL538_RS13040 PF04055 Radical SAM superfamily AL538_RS13045 PF03099 Biotin/lipoate A/B protein ligase family AL538_RS13050 PF04359 Protein of unknown function (DUF493) AL538_RS13055 PF07943 Penicillin-binding protein 5, C-terminal domain AL538_RS13055 PF00768 D-alanyl-D-alanine carboxypeptidase AL538_RS13060 PF03330 Lytic transglycolase AL538_RS13060 PF05036 Sporulation related domain AL538_RS13065 PF01098 Cell cycle protein AL538_RS13075 PF02590 Predicted SPOUT methyltransferase AL538_RS13085 PF06144 DNA polymerase III, delta subunit AL538_RS13085 PF14840 Processivity clamp loader gamma complex DNA pol III C-term AL538_RS13090 PF04390 Lipopolysaccharide-assembly AL538_RS13095 PF13603 Leucyl-tRNA synthetase, Domain 2 AL538_RS13095 PF08264 Anticodon-binding domain of tRNA AL538_RS13095 PF00133 tRNA synthetases class I (I, L, M and V) AL538_RS13100 PF07295 Zinc-ribbon containing domain AL538_RS13105 PF00795 Carbon-nitrogen hydrolase AL538_RS13110 PF03471 Transporter associated domain AL538_RS13110 PF00571 CBS domain AL538_RS13115 PF02130 Uncharacterized protein family UPF0054 AL538_RS13120 PF02562 PhoH-like protein AL538_RS13125 PF00919 Uncharacterized protein family UPF0004 AL538_RS13125 PF01938 TRAM domain AL538_RS13125 PF04055 Radical SAM superfamily AL538_RS13130 PF01494 FAD binding domain AL538_RS13240 PF06071 Protein of unknown function (DUF933) AL538_RS13240 PF01926 50S ribosome-binding GTPase AL538_RS13245 PF01195 Peptidyl-tRNA hydrolase AL538_RS13250 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AL538_RS13250 PF14572 Phosphoribosyl synthetase-associated domain AL538_RS13255 PF00288 GHMP kinases N terminal domain AL538_RS13255 PF08544 GHMP kinases C terminal AL538_RS13260 PF03550 Outer membrane lipoprotein LolB AL538_RS13265 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AL538_RS13265 PF01488 Shikimate / quinate 5-dehydrogenase AL538_RS13265 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AL538_RS13270 PF03462 PCRF domain AL538_RS13270 PF00472 RF-1 domain AL538_RS13275 PF13847 Methyltransferase domain AL538_RS13275 PF17827 PrmC N-terminal domain AL538_RS13280 PF04247 Invasion gene expression up-regulator, SirB AL538_RS13285 PF13369 Transglutaminase-like superfamily AL538_RS13290 PF00793 DAHP synthetase I family AL538_RS13295 PF00149 Calcineurin-like phosphoesterase AL538_RS13295 PF02872 5'-nucleotidase, C-terminal domain AL538_RS13300 PF04073 Aminoacyl-tRNA editing domain AL538_RS13305 PF01479 S4 domain AL538_RS13305 PF00849 RNA pseudouridylate synthase AL538_RS13310 PF01713 Smr domain AL538_RS13335 PF00728 Glycosyl hydrolase family 20, catalytic domain AL538_RS13335 PF03173 Putative carbohydrate binding domain AL538_RS13335 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain AL538_RS13335 PF02838 Glycosyl hydrolase family 20, domain 2 AL538_RS13350 PF00403 Heavy-metal-associated domain AL538_RS13355 PF13609 Gram-negative porin AL538_RS13360 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) AL538_RS13365 PF00749 tRNA synthetases class I (E and Q), catalytic domain AL538_RS13370 PF01389 OmpA-like transmembrane domain AL538_RS13370 PF00691 OmpA family AL538_RS13425 PF01584 CheW-like domain AL538_RS13425 PF00072 Response regulator receiver domain AL538_RS13430 PF01739 CheR methyltransferase, SAM binding domain AL538_RS13430 PF03705 CheR methyltransferase, all-alpha domain AL538_RS13435 PF00460 Flagella basal body rod protein AL538_RS13440 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL538_RS13440 PF00460 Flagella basal body rod protein AL538_RS13445 PF13861 FlgD Tudor-like domain AL538_RS13445 PF13860 FlgD Ig-like domain AL538_RS13445 PF03963 Flagellar hook capping protein - N-terminal region AL538_RS13450 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL538_RS13450 PF00460 Flagella basal body rod protein AL538_RS13450 PF07559 Flagellar basal body protein FlaE AL538_RS13455 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL538_RS13455 PF00460 Flagella basal body rod protein AL538_RS13460 PF00460 Flagella basal body rod protein AL538_RS13460 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL538_RS13465 PF02107 Flagellar L-ring protein AL538_RS13470 PF02119 Flagellar P-ring protein AL538_RS13490 PF00700 Bacterial flagellin C-terminal helical region AL538_RS13490 PF00669 Bacterial flagellin N-terminal helical region AL538_RS13490 PF07196 Flagellin hook IN motif AL538_RS13495 PF07196 Flagellin hook IN motif AL538_RS13495 PF00700 Bacterial flagellin C-terminal helical region AL538_RS13495 PF00669 Bacterial flagellin N-terminal helical region AL538_RS13500 PF00669 Bacterial flagellin N-terminal helical region AL538_RS13500 PF07196 Flagellin hook IN motif AL538_RS13500 PF00700 Bacterial flagellin C-terminal helical region AL538_RS13505 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AL538_RS13510 PF02896 PEP-utilising enzyme, TIM barrel domain AL538_RS13510 PF05524 PEP-utilising enzyme, N-terminal AL538_RS13510 PF00391 PEP-utilising enzyme, mobile domain AL538_RS13515 PF00381 PTS HPr component phosphorylation site AL538_RS13520 PF00291 Pyridoxal-phosphate dependent enzyme AL538_RS13530 PF04354 ZipA, C-terminal FtsZ-binding domain AL538_RS13535 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AL538_RS13535 PF01653 NAD-dependent DNA ligase adenylation domain AL538_RS13535 PF00533 BRCA1 C Terminus (BRCT) domain AL538_RS13535 PF03120 NAD-dependent DNA ligase OB-fold domain AL538_RS13535 PF12826 Helix-hairpin-helix motif AL538_RS13540 PF03573 outer membrane porin, OprD family AL538_RS13555 PF01145 SPFH domain / Band 7 family AL538_RS13555 PF16200 C-terminal region of band_7 AL538_RS13560 PF00085 Thioredoxin AL538_RS13565 PF00106 short chain dehydrogenase AL538_RS13570 PF01370 NAD dependent epimerase/dehydratase family AL538_RS13570 PF08338 Domain of unknown function (DUF1731) AL538_RS13575 PF07556 Protein of unknown function (DUF1538) AL538_RS13580 PF07556 Protein of unknown function (DUF1538) AL538_RS13600 PF12850 Calcineurin-like phosphoesterase superfamily domain AL538_RS13615 PF17323 Trans-membrane regulatory protein ToxS AL538_RS13620 PF00486 Transcriptional regulatory protein, C terminal AL538_RS13625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS13625 PF00183 Hsp90 protein AL538_RS13630 PF05191 Adenylate kinase, active site lid AL538_RS13635 PF00762 Ferrochelatase AL538_RS13640 PF00854 POT family AL538_RS13645 PF02357 Transcription termination factor nusG AL538_RS13650 PF13537 Glutamine amidotransferase domain AL538_RS13650 PF00733 Asparagine synthase AL538_RS13655 PF00999 Sodium/hydrogen exchanger family AL538_RS13655 PF02254 TrkA-N domain AL538_RS13660 PF00480 ROK family AL538_RS13660 PF01047 MarR family AL538_RS13665 PF01979 Amidohydrolase family AL538_RS13670 PF02378 Phosphotransferase system, EIIC AL538_RS13670 PF00367 phosphotransferase system, EIIB AL538_RS13670 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AL538_RS13675 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AL538_RS13675 PF00749 tRNA synthetases class I (E and Q), catalytic domain AL538_RS13680 PF07963 Prokaryotic N-terminal methylation motif AL538_RS13685 PF01475 Ferric uptake regulator family AL538_RS13695 PF00258 Flavodoxin AL538_RS13705 PF00561 alpha/beta hydrolase fold AL538_RS13710 PF17206 SeqA protein N-terminal domain AL538_RS13710 PF03925 SeqA protein C-terminal domain AL538_RS13715 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AL538_RS13715 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AL538_RS13715 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AL538_RS13715 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AL538_RS13730 PF01784 NIF3 (NGG1p interacting factor 3) AL538_RS13735 PF00285 Citrate synthase, C-terminal domain AL538_RS13740 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AL538_RS13745 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AL538_RS13750 PF00890 FAD binding domain AL538_RS13750 PF02910 Fumarate reductase flavoprotein C-term AL538_RS13755 PF13085 2Fe-2S iron-sulfur cluster binding domain AL538_RS13760 PF00676 Dehydrogenase E1 component AL538_RS13760 PF02779 Transketolase, pyrimidine binding domain AL538_RS13760 PF16870 2-oxoglutarate dehydrogenase C-terminal AL538_RS13760 PF16078 2-oxoglutarate dehydrogenase N-terminus AL538_RS13765 PF02817 e3 binding domain AL538_RS13765 PF00364 Biotin-requiring enzyme AL538_RS13765 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AL538_RS13770 PF08442 ATP-grasp domain AL538_RS13770 PF00549 CoA-ligase AL538_RS13775 PF00549 CoA-ligase AL538_RS13775 PF02629 CoA binding domain AL538_RS13780 PF00950 ABC 3 transport family AL538_RS13785 PF00005 ABC transporter AL538_RS13790 PF01297 Zinc-uptake complex component A periplasmic AL538_RS13795 PF12833 Helix-turn-helix domain AL538_RS13795 PF02311 AraC-like ligand binding domain AL538_RS13800 PF04023 FeoA domain AL538_RS13805 PF07664 Ferrous iron transport protein B C terminus AL538_RS13805 PF07670 Nucleoside recognition AL538_RS13805 PF17910 FeoB cytosolic helical domain AL538_RS13805 PF02421 Ferrous iron transport protein B AL538_RS13825 PF00750 tRNA synthetases class I (R) AL538_RS13825 PF03485 Arginyl tRNA synthetase N terminal domain AL538_RS13825 PF05746 DALR anticodon binding domain AL538_RS13830 PF06185 YecM protein AL538_RS13835 PF01842 ACT domain AL538_RS13835 PF00551 Formyl transferase AL538_RS13840 PF13307 Helicase C-terminal domain AL538_RS13840 PF04851 Type III restriction enzyme, res subunit AL538_RS13845 PF00814 Glycoprotease family AL538_RS13855 PF03843 Outer membrane lipoprotein Slp family AL538_RS13860 PF00561 alpha/beta hydrolase fold AL538_RS13865 PF13193 AMP-binding enzyme C-terminal domain AL538_RS13865 PF00501 AMP-binding enzyme AL538_RS13870 PF00570 HRDC domain AL538_RS13870 PF01612 3'-5' exonuclease AL538_RS13875 PF03776 Septum formation topological specificity factor MinE AL538_RS13880 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AL538_RS13885 PF03775 Septum formation inhibitor MinC, C-terminal domain AL538_RS13885 PF05209 Septum formation inhibitor MinC, N-terminal domain AL538_RS13890 PF05166 YcgL domain AL538_RS13895 PF13406 Transglycosylase SLT domain AL538_RS13900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS13900 PF03466 LysR substrate binding domain AL538_RS13905 PF07662 Na+ dependent nucleoside transporter C-terminus AL538_RS13905 PF01773 Na+ dependent nucleoside transporter N-terminus AL538_RS13905 PF07670 Nucleoside recognition AL538_RS13910 PF00145 C-5 cytosine-specific DNA methylase AL538_RS13920 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AL538_RS13920 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AL538_RS13930 PF02899 Phage integrase, N-terminal SAM-like domain AL538_RS13930 PF00589 Phage integrase family AL538_RS13945 PF04717 Type VI secretion system, phage-baseplate injector AL538_RS13965 PF04471 Restriction endonuclease AL538_RS13965 PF14338 Mrr N-terminal domain AL538_RS13970 PF12008 Type I restriction and modification enzyme - subunit R C terminal AL538_RS13970 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AL538_RS13970 PF18766 SWI2/SNF2 ATPase AL538_RS13980 PF12161 HsdM N-terminal domain AL538_RS13980 PF02384 N-6 DNA Methylase AL538_RS14030 PF00109 Beta-ketoacyl synthase, N-terminal domain AL538_RS14030 PF02801 Beta-ketoacyl synthase, C-terminal domain AL538_RS14040 PF07977 FabA-like domain AL538_RS14045 PF02801 Beta-ketoacyl synthase, C-terminal domain AL538_RS14045 PF00109 Beta-ketoacyl synthase, N-terminal domain AL538_RS14070 PF00221 Aromatic amino acid lyase AL538_RS14075 PF00535 Glycosyl transferase family 2 AL538_RS14080 PF07977 FabA-like domain AL538_RS14085 PF13193 AMP-binding enzyme C-terminal domain AL538_RS14085 PF00501 AMP-binding enzyme AL538_RS14095 PF00550 Phosphopantetheine attachment site AL538_RS14100 PF00550 Phosphopantetheine attachment site AL538_RS14125 PF04820 Tryptophan halogenase AL538_RS14150 PF00425 chorismate binding enzyme AL538_RS14155 PF13193 AMP-binding enzyme C-terminal domain AL538_RS14155 PF00501 AMP-binding enzyme AL538_RS14160 PF00857 Isochorismatase family AL538_RS14160 PF00550 Phosphopantetheine attachment site AL538_RS14165 PF13193 AMP-binding enzyme C-terminal domain AL538_RS14165 PF00501 AMP-binding enzyme AL538_RS14165 PF00501 AMP-binding enzyme AL538_RS14165 PF13193 AMP-binding enzyme C-terminal domain AL538_RS14165 PF00668 Condensation domain AL538_RS14165 PF00550 Phosphopantetheine attachment site AL538_RS14165 PF00975 Thioesterase domain AL538_RS14165 PF00975 Thioesterase domain AL538_RS14165 PF00550 Phosphopantetheine attachment site AL538_RS14165 PF00668 Condensation domain AL538_RS14180 PF07715 TonB-dependent Receptor Plug Domain AL538_RS14180 PF00593 TonB dependent receptor AL538_RS14185 PF01595 Cyclin M transmembrane N-terminal domain AL538_RS14185 PF03471 Transporter associated domain AL538_RS14185 PF00571 CBS domain AL538_RS14190 PF00270 DEAD/DEAH box helicase AL538_RS14190 PF00271 Helicase conserved C-terminal domain AL538_RS14195 PF02080 TrkA-C domain AL538_RS14195 PF02254 TrkA-N domain AL538_RS14200 PF02386 Cation transport protein AL538_RS14210 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AL538_RS14215 PF03480 Bacterial extracellular solute-binding protein, family 7 AL538_RS14220 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AL538_RS14225 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AL538_RS14235 PF02954 Bacterial regulatory protein, Fis family AL538_RS14235 PF00072 Response regulator receiver domain AL538_RS14235 PF00158 Sigma-54 interaction domain AL538_RS14240 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS14240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS14240 PF02743 Cache domain AL538_RS14245 PF05697 Bacterial trigger factor protein (TF) AL538_RS14245 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AL538_RS14245 PF05698 Bacterial trigger factor protein (TF) C-terminus AL538_RS14250 PF00574 Clp protease AL538_RS14255 PF10431 C-terminal, D2-small domain, of ClpB protein AL538_RS14255 PF06689 ClpX C4-type zinc finger AL538_RS14255 PF07724 AAA domain (Cdc48 subfamily) AL538_RS14260 PF02190 ATP-dependent protease La (LON) substrate-binding domain AL538_RS14260 PF05362 Lon protease (S16) C-terminal proteolytic domain AL538_RS14260 PF00004 ATPase family associated with various cellular activities (AAA) AL538_RS14265 PF00216 Bacterial DNA-binding protein AL538_RS14270 PF13145 PPIC-type PPIASE domain AL538_RS14290 PF13286 Phosphohydrolase-associated domain AL538_RS14290 PF01966 HD domain AL538_RS14300 PF00155 Aminotransferase class I and II AL538_RS14305 PF00425 chorismate binding enzyme AL538_RS14310 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AL538_RS14310 PF16582 Middle domain of thiamine pyrophosphate AL538_RS14310 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AL538_RS14315 PF12697 Alpha/beta hydrolase family AL538_RS14320 PF00378 Enoyl-CoA hydratase/isomerase AL538_RS14325 PF13378 Enolase C-terminal domain-like AL538_RS14330 PF13193 AMP-binding enzyme C-terminal domain AL538_RS14330 PF00501 AMP-binding enzyme AL538_RS14335 PF00367 phosphotransferase system, EIIB AL538_RS14335 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AL538_RS14335 PF02378 Phosphotransferase system, EIIC AL538_RS14340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS14340 PF03466 LysR substrate binding domain AL538_RS14350 PF03601 Conserved hypothetical protein 698 AL538_RS14355 PF07690 Major Facilitator Superfamily AL538_RS14400 PF13533 Biotin-lipoyl like AL538_RS14405 PF00873 AcrB/AcrD/AcrF family AL538_RS14425 PF00291 Pyridoxal-phosphate dependent enzyme AL538_RS14430 PF13404 AsnC-type helix-turn-helix domain AL538_RS14430 PF01037 Lrp/AsnC ligand binding domain AL538_RS14440 PF13006 Insertion element 4 transposase N-terminal AL538_RS14440 PF01609 Transposase DDE domain AL538_RS14450 PF09619 Type III secretion system lipoprotein chaperone (YscW) AL538_RS14455 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AL538_RS14465 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS14475 PF00689 Cation transporting ATPase, C-terminus AL538_RS14475 PF00690 Cation transporter/ATPase, N-terminus AL538_RS14480 PF00588 SpoU rRNA Methylase family AL538_RS14480 PF08032 RNA 2'-O ribose methyltransferase substrate binding AL538_RS14485 PF11953 Domain of unknown function (DUF3470) AL538_RS14485 PF00037 4Fe-4S binding domain AL538_RS14495 PF00571 CBS domain AL538_RS14495 PF01743 Poly A polymerase head domain AL538_RS14500 PF01554 MatE AL538_RS14505 PF00403 Heavy-metal-associated domain AL538_RS14510 PF01048 Phosphorylase superfamily AL538_RS14520 PF00672 HAMP domain AL538_RS14520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS14525 PF01230 HIT domain AL538_RS14540 PF08139 Prokaryotic membrane lipoprotein lipid attachment site AL538_RS14540 PF13036 Peptidoglycan-synthase activator LpoB AL538_RS14550 PF05728 Uncharacterised protein family (UPF0227) AL538_RS14555 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL538_RS14570 PF00271 Helicase conserved C-terminal domain AL538_RS14570 PF03461 TRCF domain AL538_RS14570 PF02559 CarD-like/TRCF domain AL538_RS14570 PF17757 UvrB interaction domain AL538_RS14570 PF00270 DEAD/DEAH box helicase AL538_RS14580 PF12704 MacB-like periplasmic core domain AL538_RS14580 PF02687 FtsX-like permease family AL538_RS14585 PF00005 ABC transporter AL538_RS14590 PF12704 MacB-like periplasmic core domain AL538_RS14590 PF02687 FtsX-like permease family AL538_RS14600 PF03772 Competence protein AL538_RS14600 PF00753 Metallo-beta-lactamase superfamily AL538_RS14605 PF00005 ABC transporter AL538_RS14605 PF00664 ABC transporter transmembrane region AL538_RS14610 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AL538_RS14615 PF03966 Trm112p-like protein AL538_RS14620 PF02348 Cytidylyltransferase AL538_RS14625 PF04293 SpoVR like protein AL538_RS14630 PF04285 Protein of unknown function (DUF444) AL538_RS14635 PF08298 PrkA AAA domain AL538_RS14635 PF06798 PrkA serine protein kinase C-terminal domain AL538_RS14640 PF03887 YfbU domain AL538_RS14650 PF04055 Radical SAM superfamily AL538_RS14660 PF02901 Pyruvate formate lyase-like AL538_RS14660 PF01228 Glycine radical AL538_RS14675 PF00005 ABC transporter AL538_RS14680 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL538_RS14685 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS14690 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS14695 PF03372 Endonuclease/Exonuclease/phosphatase family AL538_RS14700 PF00672 HAMP domain AL538_RS14700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS14705 PF10689 Protein of unknown function (DUF2496) AL538_RS14715 PF01925 Sulfite exporter TauE/SafE AL538_RS14720 PF13307 Helicase C-terminal domain AL538_RS14720 PF06733 DEAD_2 AL538_RS14730 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) AL538_RS14735 PF00849 RNA pseudouridylate synthase AL538_RS14740 PF03971 Monomeric isocitrate dehydrogenase AL538_RS14745 PF00313 'Cold-shock' DNA-binding domain AL538_RS14750 PF02617 ATP-dependent Clp protease adaptor protein ClpS AL538_RS14755 PF10431 C-terminal, D2-small domain, of ClpB protein AL538_RS14755 PF07724 AAA domain (Cdc48 subfamily) AL538_RS14755 PF00004 ATPase family associated with various cellular activities (AAA) AL538_RS14755 PF17871 AAA lid domain AL538_RS14755 PF02861 Clp amino terminal domain, pathogenicity island component AL538_RS14760 PF01176 Translation initiation factor 1A / IF-1 AL538_RS14765 PF04377 Arginine-tRNA-protein transferase, C terminus AL538_RS14765 PF04376 Arginine-tRNA-protein transferase, N terminus AL538_RS14770 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AL538_RS14780 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AL538_RS14785 PF10692 Protein of unknown function (DUF2498) AL538_RS14790 PF08272 Topoisomerase I zinc-ribbon-like AL538_RS14790 PF01131 DNA topoisomerase AL538_RS14790 PF01751 Toprim domain AL538_RS14790 PF01396 Topoisomerase DNA binding C4 zinc finger AL538_RS14795 PF00483 Nucleotidyl transferase AL538_RS14800 PF00534 Glycosyl transferases group 1 AL538_RS14800 PF08323 Starch synthase catalytic domain AL538_RS14820 PF04993 TfoX N-terminal domain AL538_RS14820 PF04994 TfoX C-terminal domain AL538_RS14825 PF00356 Bacterial regulatory proteins, lacI family AL538_RS14830 PF02613 Nitrate reductase delta subunit AL538_RS14835 PF00486 Transcriptional regulatory protein, C terminal AL538_RS14835 PF00072 Response regulator receiver domain AL538_RS14840 PF02698 DUF218 domain AL538_RS14845 PF13847 Methyltransferase domain AL538_RS14850 PF17193 MukF C-terminal domain AL538_RS14850 PF03882 MukF winged-helix domain AL538_RS14850 PF17192 MukF middle domain AL538_RS14855 PF04288 MukE-like family AL538_RS14860 PF16330 MukB hinge domain AL538_RS14860 PF04310 MukB N-terminal AL538_RS14865 PF08443 RimK-like ATP-grasp domain AL538_RS14865 PF18030 RimK PreATP-grasp domain AL538_RS14875 PF08443 RimK-like ATP-grasp domain AL538_RS14875 PF18030 RimK PreATP-grasp domain AL538_RS14880 PF08003 Protein of unknown function (DUF1698) AL538_RS14885 PF13649 Methyltransferase domain AL538_RS14890 PF01904 Protein of unknown function DUF72 AL538_RS14895 PF02938 GAD domain AL538_RS14895 PF01336 OB-fold nucleic acid binding domain AL538_RS14895 PF00152 tRNA synthetases class II (D, K and N) AL538_RS14900 PF02075 Crossover junction endodeoxyribonuclease RuvC AL538_RS14905 PF02203 Tar ligand binding domain homologue AL538_RS14905 PF00672 HAMP domain AL538_RS14905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS14910 PF07499 RuvA, C-terminal domain AL538_RS14910 PF01330 RuvA N terminal domain AL538_RS14915 PF05496 Holliday junction DNA helicase RuvB P-loop domain AL538_RS14915 PF05491 RuvB C-terminal winged helix domain AL538_RS14915 PF17864 RuvB AAA lid domain AL538_RS14920 PF01654 Cytochrome bd terminal oxidase subunit I AL538_RS14925 PF02322 Cytochrome bd terminal oxidase subunit II AL538_RS14930 PF08173 Membrane bound YbgT-like protein AL538_RS14940 PF03061 Thioesterase superfamily AL538_RS14945 PF01618 MotA/TolQ/ExbB proton channel family AL538_RS14950 PF02472 Biopolymer transport protein ExbD/TolR AL538_RS14960 PF07676 WD40-like Beta Propeller Repeat AL538_RS14960 PF04052 TolB amino-terminal domain AL538_RS14965 PF00691 OmpA family AL538_RS14970 PF13174 Tetratricopeptide repeat AL538_RS14970 PF16331 TolA binding protein trimerisation AL538_RS14975 PF01380 SIS domain AL538_RS14975 PF00571 CBS domain AL538_RS14980 PF03928 Haem-degrading AL538_RS14985 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AL538_RS14985 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AL538_RS14990 PF00391 PEP-utilising enzyme, mobile domain AL538_RS14990 PF05524 PEP-utilising enzyme, N-terminal AL538_RS14990 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AL538_RS14990 PF00381 PTS HPr component phosphorylation site AL538_RS14990 PF02896 PEP-utilising enzyme, TIM barrel domain AL538_RS15000 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AL538_RS15005 PF02901 Pyruvate formate lyase-like AL538_RS15005 PF01228 Glycine radical AL538_RS15010 PF04055 Radical SAM superfamily AL538_RS15015 PF04321 RmlD substrate binding domain AL538_RS15020 PF00923 Transaldolase/Fructose-6-phosphate aldolase AL538_RS15025 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AL538_RS15030 PF12833 Helix-turn-helix domain AL538_RS15035 PF00465 Iron-containing alcohol dehydrogenase AL538_RS15040 PF13419 Haloacid dehalogenase-like hydrolase AL538_RS15045 PF01238 Phosphomannose isomerase type I AL538_RS15050 PF02445 Quinolinate synthetase A protein AL538_RS15060 PF03994 Domain of Unknown Function (DUF350) AL538_RS15070 PF03738 Glutathionylspermidine synthase preATP-grasp AL538_RS15080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS15080 PF09308 LuxQ, periplasmic AL538_RS15080 PF00072 Response regulator receiver domain AL538_RS15080 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS15085 PF06610 L-alanine exporter AL538_RS15110 PF12833 Helix-turn-helix domain AL538_RS15125 PF03958 Bacterial type II/III secretion system short domain AL538_RS15125 PF00263 Bacterial type II and III secretion system protein AL538_RS15140 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF AL538_RS15155 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI AL538_RS15160 PF01514 Secretory protein of YscJ/FliF family AL538_RS15170 PF02108 Flagellar assembly protein FliH AL538_RS15205 PF01312 FlhB HrpN YscU SpaS Family AL538_RS15210 PF01311 Bacterial export proteins, family 1 AL538_RS15215 PF01313 Bacterial export proteins, family 3 AL538_RS15220 PF00813 FliP family AL538_RS15225 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AL538_RS15240 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AL538_RS15240 PF02874 ATP synthase alpha/beta family, beta-barrel domain AL538_RS15240 PF18269 T3SS EscN ATPase C-terminal domain AL538_RS15245 PF07201 HrpJ-like domain AL538_RS15250 PF09059 TyeA AL538_RS15270 PF00771 FHIPEP family AL538_RS15275 PF09621 Type III secretion system regulator (LcrR) AL538_RS15285 PF04792 V antigen (LcrV) protein AL538_RS15290 PF07720 Tetratricopeptide repeat AL538_RS15300 PF05844 YopD protein AL538_RS15305 PF13411 MerR HTH family regulatory protein AL538_RS15310 PF02627 Carboxymuconolactone decarboxylase family AL538_RS15315 PF02264 LamB porin AL538_RS15315 PF11471 Maltoporin periplasmic N-terminal extension AL538_RS15320 PF00356 Bacterial regulatory proteins, lacI family AL538_RS15325 PF02378 Phosphotransferase system, EIIC AL538_RS15325 PF00367 phosphotransferase system, EIIB AL538_RS15330 PF00294 pfkB family carbohydrate kinase AL538_RS15335 PF00251 Glycosyl hydrolases family 32 N-terminal domain AL538_RS15335 PF08244 Glycosyl hydrolases family 32 C terminal AL538_RS15340 PF08274 PhnA Zinc-Ribbon AL538_RS15340 PF03831 PhnA domain AL538_RS15350 PF00593 TonB dependent receptor AL538_RS15350 PF07715 TonB-dependent Receptor Plug Domain AL538_RS15355 PF00027 Cyclic nucleotide-binding domain AL538_RS15355 PF00325 Bacterial regulatory proteins, crp family AL538_RS15380 PF01554 MatE AL538_RS15385 PF00005 ABC transporter AL538_RS15385 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL538_RS15390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL538_RS15390 PF00005 ABC transporter AL538_RS15395 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL538_RS15400 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS15410 PF02743 Cache domain AL538_RS15410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS15410 PF00672 HAMP domain AL538_RS15415 PF03466 LysR substrate binding domain AL538_RS15415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS15420 PF00593 TonB dependent receptor AL538_RS15420 PF07715 TonB-dependent Receptor Plug Domain AL538_RS15440 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL538_RS15440 PF00529 HlyD membrane-fusion protein of T1SS AL538_RS15445 PF00873 AcrB/AcrD/AcrF family AL538_RS15455 PF07729 FCD domain AL538_RS15455 PF00392 Bacterial regulatory proteins, gntR family AL538_RS15460 PF07687 Peptidase dimerisation domain AL538_RS15460 PF01546 Peptidase family M20/M25/M40 AL538_RS15465 PF03606 C4-dicarboxylate anaerobic carrier AL538_RS15475 PF01557 Fumarylacetoacetate (FAA) hydrolase family AL538_RS15490 PF00474 Sodium:solute symporter family AL538_RS15505 PF00929 Exonuclease AL538_RS15505 PF02811 PHP domain AL538_RS15505 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AL538_RS15505 PF14579 Helix-hairpin-helix motif AL538_RS15505 PF07733 Bacterial DNA polymerase III alpha NTPase domain AL538_RS15510 PF00571 CBS domain AL538_RS15515 PF00392 Bacterial regulatory proteins, gntR family AL538_RS15515 PF07729 FCD domain AL538_RS15525 PF00392 Bacterial regulatory proteins, gntR family AL538_RS15525 PF07729 FCD domain AL538_RS15535 PF05426 Alginate lyase AL538_RS15535 PF07940 Heparinase II/III-like protein AL538_RS15540 PF05426 Alginate lyase AL538_RS15540 PF07940 Heparinase II/III-like protein AL538_RS15545 PF07883 Cupin domain AL538_RS15550 PF00294 pfkB family carbohydrate kinase AL538_RS15555 PF01081 KDPG and KHG aldolase AL538_RS15560 PF00474 Sodium:solute symporter family AL538_RS15570 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AL538_RS15570 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AL538_RS15575 PF00141 Peroxidase AL538_RS15585 PF00579 tRNA synthetases class I (W and Y) AL538_RS15600 PF03372 Endonuclease/Exonuclease/phosphatase family AL538_RS15605 PF00672 HAMP domain AL538_RS15605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS15605 PF02743 Cache domain AL538_RS15610 PF08453 Peptidase family M9 N-terminal AL538_RS15610 PF04151 Bacterial pre-peptidase C-terminal domain AL538_RS15610 PF01752 Collagenase AL538_RS15625 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AL538_RS15635 PF03466 LysR substrate binding domain AL538_RS15635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS15645 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AL538_RS15645 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AL538_RS15650 PF01037 Lrp/AsnC ligand binding domain AL538_RS15655 PF01580 FtsK/SpoIIIE family AL538_RS15655 PF09397 Ftsk gamma domain AL538_RS15655 PF17854 FtsK alpha domain AL538_RS15655 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AL538_RS15660 PF03548 Outer membrane lipoprotein carrier protein LolA AL538_RS15665 PF12002 MgsA AAA+ ATPase C terminal AL538_RS15665 PF16193 AAA C-terminal domain AL538_RS15665 PF00004 ATPase family associated with various cellular activities (AAA) AL538_RS15670 PF02403 Seryl-tRNA synthetase N-terminal domain AL538_RS15670 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AL538_RS15685 PF01258 Prokaryotic dksA/traR C4-type zinc finger AL538_RS15690 PF00202 Aminotransferase class-III AL538_RS15695 PF04055 Radical SAM superfamily AL538_RS15695 PF06968 Biotin and Thiamin Synthesis associated domain AL538_RS15700 PF00155 Aminotransferase class I and II AL538_RS15705 PF08241 Methyltransferase domain AL538_RS15715 PF01435 Peptidase family M48 AL538_RS15725 PF00106 short chain dehydrogenase AL538_RS15750 PF16036 Chalcone isomerase-like AL538_RS15760 PF00206 Lyase AL538_RS15760 PF08328 Adenylosuccinate lyase C-terminal AL538_RS15765 PF04356 Protein of unknown function (DUF489) AL538_RS15780 PF00294 pfkB family carbohydrate kinase AL538_RS15785 PF00816 H-NS histone family AL538_RS15790 PF03553 Na+/H+ antiporter family AL538_RS15795 PF02954 Bacterial regulatory protein, Fis family AL538_RS15795 PF00158 Sigma-54 interaction domain AL538_RS15795 PF00072 Response regulator receiver domain AL538_RS15800 PF08029 HisG, C-terminal domain AL538_RS15800 PF01634 ATP phosphoribosyltransferase AL538_RS15805 PF00815 Histidinol dehydrogenase AL538_RS15810 PF00155 Aminotransferase class I and II AL538_RS15815 PF00475 Imidazoleglycerol-phosphate dehydratase AL538_RS15815 PF08645 Polynucleotide kinase 3 phosphatase AL538_RS15820 PF00117 Glutamine amidotransferase class-I AL538_RS15825 PF00977 Histidine biosynthesis protein AL538_RS15830 PF00977 Histidine biosynthesis protein AL538_RS15835 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AL538_RS15835 PF01502 Phosphoribosyl-AMP cyclohydrolase AL538_RS15840 PF02810 SEC-C motif AL538_RS15845 PF00563 EAL domain AL538_RS15845 PF08668 HDOD domain AL538_RS15850 PF00149 Calcineurin-like phosphoesterase AL538_RS15855 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AL538_RS15860 PF01406 tRNA synthetases class I (C) catalytic domain AL538_RS15860 PF09190 DALR domain AL538_RS15865 PF00265 Thymidine kinase AL538_RS15870 PF02698 DUF218 domain AL538_RS15895 PF01226 Formate/nitrite transporter AL538_RS15900 PF03649 Uncharacterised protein family (UPF0014) AL538_RS15905 PF06796 Periplasmic nitrate reductase protein NapE AL538_RS15910 PF03264 NapC/NirT cytochrome c family, N-terminal region AL538_RS15915 PF00384 Molybdopterin oxidoreductase AL538_RS15915 PF18364 Molybdopterin oxidoreductase N-terminal domain AL538_RS15915 PF01568 Molydopterin dinucleotide binding domain AL538_RS15920 PF16875 Glycosyl hydrolase family 36 N-terminal domain AL538_RS15920 PF16874 Glycosyl hydrolase family 36 C-terminal domain AL538_RS15925 PF01297 Zinc-uptake complex component A periplasmic AL538_RS15930 PF00005 ABC transporter AL538_RS15935 PF00950 ABC 3 transport family AL538_RS15940 PF00950 ABC 3 transport family AL538_RS15945 PF02833 DHHA2 domain AL538_RS15945 PF01368 DHH family AL538_RS15955 PF00005 ABC transporter AL538_RS15960 PF00005 ABC transporter AL538_RS15960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL538_RS15965 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS15965 PF12911 N-terminal TM domain of oligopeptide transport permease C AL538_RS15970 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS15975 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL538_RS15980 PF00158 Sigma-54 interaction domain AL538_RS15980 PF02954 Bacterial regulatory protein, Fis family AL538_RS15985 PF04012 PspA/IM30 family AL538_RS15990 PF06667 Phage shock protein B AL538_RS16005 PF13533 Biotin-lipoyl like AL538_RS16010 PF00873 AcrB/AcrD/AcrF family AL538_RS16015 PF03352 Methyladenine glycosylase AL538_RS16020 PF03280 Proteobacterial lipase chaperone protein AL538_RS16025 PF00561 alpha/beta hydrolase fold AL538_RS16030 PF01053 Cys/Met metabolism PLP-dependent enzyme AL538_RS16035 PF13091 PLD-like domain AL538_RS16035 PF13396 Phospholipase_D-nuclease N-terminal AL538_RS16040 PF00209 Sodium:neurotransmitter symporter family AL538_RS16045 PF00672 HAMP domain AL538_RS16045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS16045 PF12729 Four helix bundle sensory module for signal transduction AL538_RS16050 PF00849 RNA pseudouridylate synthase AL538_RS16060 PF00970 Oxidoreductase FAD-binding domain AL538_RS16060 PF00111 2Fe-2S iron-sulfur cluster binding domain AL538_RS16060 PF00175 Oxidoreductase NAD-binding domain AL538_RS16065 PF03063 Prismane/CO dehydrogenase family AL538_RS16070 PF00158 Sigma-54 interaction domain AL538_RS16070 PF01590 GAF domain AL538_RS16075 PF01066 CDP-alcohol phosphatidyltransferase AL538_RS16080 PF00005 ABC transporter AL538_RS16085 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS16090 PF13416 Bacterial extracellular solute-binding protein AL538_RS16095 PF09335 SNARE associated Golgi protein AL538_RS16105 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL538_RS16105 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AL538_RS16115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS16115 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS16120 PF00072 Response regulator receiver domain AL538_RS16120 PF00196 Bacterial regulatory proteins, luxR family AL538_RS16130 PF00916 Sulfate permease family AL538_RS16130 PF01740 STAS domain AL538_RS16140 PF06945 Protein of unknown function (DUF1289) AL538_RS16150 PF02872 5'-nucleotidase, C-terminal domain AL538_RS16150 PF00149 Calcineurin-like phosphoesterase AL538_RS16165 PF01386 Ribosomal L25p family AL538_RS16170 PF00535 Glycosyl transferase family 2 AL538_RS16170 PF02709 N-terminal domain of galactosyltransferase AL538_RS16180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS16185 PF00486 Transcriptional regulatory protein, C terminal AL538_RS16185 PF00072 Response regulator receiver domain AL538_RS16195 PF00271 Helicase conserved C-terminal domain AL538_RS16195 PF04851 Type III restriction enzyme, res subunit AL538_RS16200 PF00849 RNA pseudouridylate synthase AL538_RS16200 PF01479 S4 domain AL538_RS16205 PF07690 Major Facilitator Superfamily AL538_RS16215 PF00474 Sodium:solute symporter family AL538_RS16220 PF16874 Glycosyl hydrolase family 36 C-terminal domain AL538_RS16220 PF16875 Glycosyl hydrolase family 36 N-terminal domain AL538_RS16225 PF00356 Bacterial regulatory proteins, lacI family AL538_RS16230 PF13460 NAD(P)H-binding AL538_RS16230 PF11066 Protein of unknown function (DUF2867) AL538_RS16240 PF00005 ABC transporter AL538_RS16255 PF06965 Na+/H+ antiporter 1 AL538_RS16260 PF00440 Bacterial regulatory proteins, tetR family AL538_RS16260 PF16295 Tetracyclin repressor-like, C-terminal domain AL538_RS16265 PF09317 Domain of unknown function (DUF1974) AL538_RS16265 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL538_RS16265 PF02770 Acyl-CoA dehydrogenase, middle domain AL538_RS16265 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL538_RS16270 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AL538_RS16270 PF12241 Trans-2-enoyl-CoA reductase catalytic region AL538_RS16270 PF07055 Enoyl reductase FAD binding domain AL538_RS16275 PF06826 Predicted Permease Membrane Region AL538_RS16275 PF02080 TrkA-C domain AL538_RS16280 PF00462 Glutaredoxin AL538_RS16285 PF00465 Iron-containing alcohol dehydrogenase AL538_RS16290 PF01380 SIS domain AL538_RS16290 PF01418 Helix-turn-helix domain, rpiR family AL538_RS16295 PF00282 Pyridoxal-dependent decarboxylase conserved domain AL538_RS16305 PF03956 Lysine exporter LysO AL538_RS16315 PF04994 TfoX C-terminal domain AL538_RS16315 PF04993 TfoX N-terminal domain AL538_RS16330 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS16330 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL538_RS16330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS16340 PF00266 Aminotransferase class-V AL538_RS16350 PF08448 PAS fold AL538_RS16350 PF05231 MASE1 AL538_RS16350 PF08447 PAS fold AL538_RS16350 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS16350 PF13426 PAS domain AL538_RS16350 PF00563 EAL domain AL538_RS16370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS16370 PF03466 LysR substrate binding domain AL538_RS16375 PF02447 GntP family permease AL538_RS16380 PF00291 Pyridoxal-phosphate dependent enzyme AL538_RS16385 PF00005 ABC transporter AL538_RS16385 PF00664 ABC transporter transmembrane region AL538_RS16390 PF00664 ABC transporter transmembrane region AL538_RS16390 PF00005 ABC transporter AL538_RS16395 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL538_RS16405 PF00266 Aminotransferase class-V AL538_RS16415 PF08448 PAS fold AL538_RS16415 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS16420 PF00939 Sodium:sulfate symporter transmembrane region AL538_RS16425 PF02698 DUF218 domain AL538_RS16430 PF03949 Malic enzyme, NAD binding domain AL538_RS16430 PF00390 Malic enzyme, N-terminal domain AL538_RS16435 PF04408 Helicase associated domain (HA2) AL538_RS16435 PF00270 DEAD/DEAH box helicase AL538_RS16435 PF00271 Helicase conserved C-terminal domain AL538_RS16435 PF08482 ATP-dependent helicase C-terminal AL538_RS16445 PF09423 PhoD-like phosphatase AL538_RS16445 PF16655 PhoD-like phosphatase, N-terminal domain AL538_RS16475 PF00939 Sodium:sulfate symporter transmembrane region AL538_RS16480 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL538_RS16480 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS16480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS16485 PF02954 Bacterial regulatory protein, Fis family AL538_RS16485 PF00072 Response regulator receiver domain AL538_RS16485 PF00158 Sigma-54 interaction domain AL538_RS16490 PF00563 EAL domain AL538_RS16490 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS16490 PF03707 Bacterial signalling protein N terminal repeat AL538_RS16495 PF01966 HD domain AL538_RS16495 PF11871 Domain of unknown function (DUF3391) AL538_RS16500 PF01810 LysE type translocator AL538_RS16505 PF11230 Protein of unknown function (DUF3029) AL538_RS16510 PF04055 Radical SAM superfamily AL538_RS16515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS16515 PF03466 LysR substrate binding domain AL538_RS16520 PF03741 Integral membrane protein TerC family AL538_RS16530 PF01966 HD domain AL538_RS16535 PF00106 short chain dehydrogenase AL538_RS16540 PF17158 Membrane-associated sensor, integral membrane domain AL538_RS16540 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS16550 PF00465 Iron-containing alcohol dehydrogenase AL538_RS16555 PF03222 Tryptophan/tyrosine permease family AL538_RS16570 PF00005 ABC transporter AL538_RS16575 PF01497 Periplasmic binding protein AL538_RS16580 PF01032 FecCD transport family AL538_RS16585 PF07715 TonB-dependent Receptor Plug Domain AL538_RS16585 PF00593 TonB dependent receptor AL538_RS16600 PF00005 ABC transporter AL538_RS16600 PF00664 ABC transporter transmembrane region AL538_RS16605 PF00005 ABC transporter AL538_RS16605 PF00664 ABC transporter transmembrane region AL538_RS16610 PF07963 Prokaryotic N-terminal methylation motif AL538_RS16620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS16620 PF03466 LysR substrate binding domain AL538_RS16630 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AL538_RS16630 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AL538_RS16645 PF00012 Hsp70 protein AL538_RS16650 PF00012 Hsp70 protein AL538_RS16660 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS16690 PF00384 Molybdopterin oxidoreductase AL538_RS16690 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AL538_RS16690 PF01568 Molydopterin dinucleotide binding domain AL538_RS16695 PF12800 4Fe-4S binding domain AL538_RS16695 PF13247 4Fe-4S dicluster domain AL538_RS16700 PF04976 DMSO reductase anchor subunit (DmsC) AL538_RS16705 PF02613 Nitrate reductase delta subunit AL538_RS16715 PF02525 Flavodoxin-like fold AL538_RS16720 PF00271 Helicase conserved C-terminal domain AL538_RS16720 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AL538_RS16720 PF04408 Helicase associated domain (HA2) AL538_RS16720 PF11898 Domain of unknown function (DUF3418) AL538_RS16720 PF00270 DEAD/DEAH box helicase AL538_RS16750 PF04204 Homoserine O-succinyltransferase AL538_RS16765 PF00893 Small Multidrug Resistance protein AL538_RS16770 PF13520 Amino acid permease AL538_RS16775 PF01810 LysE type translocator AL538_RS16780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS16780 PF03466 LysR substrate binding domain AL538_RS16785 PF03279 Bacterial lipid A biosynthesis acyltransferase AL538_RS16800 PF01047 MarR family AL538_RS16810 PF02074 Carboxypeptidase Taq (M32) metallopeptidase AL538_RS16815 PF00196 Bacterial regulatory proteins, luxR family AL538_RS16815 PF00072 Response regulator receiver domain AL538_RS16850 PF01810 LysE type translocator AL538_RS16860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL538_RS16860 PF00529 HlyD membrane-fusion protein of T1SS AL538_RS16865 PF00873 AcrB/AcrD/AcrF family AL538_RS16870 PF16868 NMT1-like family AL538_RS16875 PF01925 Sulfite exporter TauE/SafE AL538_RS16880 PF01970 Tripartite tricarboxylate transporter TctA family AL538_RS16900 PF00583 Acetyltransferase (GNAT) family AL538_RS16915 PF00069 Protein kinase domain AL538_RS16915 PF03793 PASTA domain AL538_RS16930 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE AL538_RS16950 PF00004 ATPase family associated with various cellular activities (AAA) AL538_RS16950 PF07724 AAA domain (Cdc48 subfamily) AL538_RS16950 PF17871 AAA lid domain AL538_RS16950 PF10431 C-terminal, D2-small domain, of ClpB protein AL538_RS16970 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath AL538_RS16975 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath AL538_RS17005 PF06715 Gp5 C-terminal repeat (3 copies) AL538_RS17005 PF04717 Type VI secretion system, phage-baseplate injector AL538_RS17025 PF00285 Citrate synthase, C-terminal domain AL538_RS17030 PF00694 Aconitase C-terminal domain AL538_RS17030 PF00330 Aconitase family (aconitate hydratase) AL538_RS17035 PF04303 PrpF protein AL538_RS17040 PF13193 AMP-binding enzyme C-terminal domain AL538_RS17040 PF00501 AMP-binding enzyme AL538_RS17040 PF16177 Acetyl-coenzyme A synthetase N-terminus AL538_RS17050 PF00089 Trypsin AL538_RS17065 PF04055 Radical SAM superfamily AL538_RS17070 PF06508 Queuosine biosynthesis protein QueC AL538_RS17075 PF13185 GAF domain AL538_RS17075 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS17085 PF05736 OprF membrane domain AL538_RS17085 PF00691 OmpA family AL538_RS17115 PF02397 Bacterial sugar transferase AL538_RS17120 PF00535 Glycosyl transferase family 2 AL538_RS17125 PF13439 Glycosyltransferase Family 4 AL538_RS17125 PF00534 Glycosyl transferases group 1 AL538_RS17155 PF13439 Glycosyltransferase Family 4 AL538_RS17155 PF00534 Glycosyl transferases group 1 AL538_RS17510 PF00771 FHIPEP family AL538_RS17920 PF02926 THUMP domain AL538_RS17920 PF01170 Putative RNA methylase family UPF0020 AL538_RS17920 PF10672 S-adenosylmethionine-dependent methyltransferase AL538_RS18070 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL538_RS18215 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AL538_RS18215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS18215 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS18215 PF00072 Response regulator receiver domain AL538_RS18215 PF00672 HAMP domain AL538_RS18215 PF01627 Hpt domain AL538_RS18235 PF12464 Maltose acetyltransferase AL538_RS18235 PF00132 Bacterial transferase hexapeptide (six repeats) AL538_RS18795 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL538_RS18865 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS18950 PF00529 HlyD membrane-fusion protein of T1SS AL538_RS18950 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL538_RS19380 PF00221 Aromatic amino acid lyase AL538_RS19920 PF00158 Sigma-54 interaction domain AL538_RS19920 PF18024 Helix-turn-helix domain AL538_RS20070 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AL538_RS20235 PF16653 Saccharopine dehydrogenase C-terminal domain AL538_RS20235 PF03435 Saccharopine dehydrogenase NADP binding domain AL538_RS20240 PF03435 Saccharopine dehydrogenase NADP binding domain AL538_RS20240 PF16653 Saccharopine dehydrogenase C-terminal domain AL538_RS20325 PF00425 chorismate binding enzyme AL538_RS20325 PF04715 Anthranilate synthase component I, N terminal region AL538_RS20335 PF02885 Glycosyl transferase family, helical bundle domain AL538_RS20335 PF00591 Glycosyl transferase family, a/b domain AL538_RS20345 PF00218 Indole-3-glycerol phosphate synthase AL538_RS20345 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AL538_RS20350 PF00218 Indole-3-glycerol phosphate synthase AL538_RS20350 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AL538_RS20375 PF17327 Acyl homoserine lactone synthase AL538_RS20385 PF00072 Response regulator receiver domain AL538_RS20385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS20450 PF11842 Domain of unknown function (DUF3362) AL538_RS20450 PF04055 Radical SAM superfamily AL538_RS20450 PF08497 Radical SAM N-terminal AL538_RS20780 PF07733 Bacterial DNA polymerase III alpha NTPase domain AL538_RS20780 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AL538_RS20780 PF14579 Helix-hairpin-helix motif AL538_RS20780 PF01336 OB-fold nucleic acid binding domain AL538_RS20780 PF02811 PHP domain AL538_RS20845 PF02378 Phosphotransferase system, EIIC AL538_RS20845 PF00367 phosphotransferase system, EIIB AL538_RS20870 PF00109 Beta-ketoacyl synthase, N-terminal domain AL538_RS20870 PF02801 Beta-ketoacyl synthase, C-terminal domain AL538_RS20910 PF00575 S1 RNA binding domain AL538_RS20910 PF12111 Polyribonucleotide phosphorylase C terminal AL538_RS20910 PF10150 Ribonuclease E/G family AL538_RS21055 PF07085 DRTGG domain AL538_RS21055 PF01515 Phosphate acetyl/butaryl transferase AL538_RS21165 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AL538_RS21165 PF10531 SLBB domain AL538_RS21165 PF13375 RnfC Barrel sandwich hybrid domain AL538_RS21165 PF12838 4Fe-4S dicluster domain AL538_RS21200 PF10952 Protein of unknown function (DUF2753) AL538_RS21355 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS21610 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AL538_RS21610 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL538_RS21665 PF02028 BCCT, betaine/carnitine/choline family transporter AL538_RS21675 PF00245 Alkaline phosphatase AL538_RS21745 PF00156 Phosphoribosyl transferase domain AL538_RS21805 PF01266 FAD dependent oxidoreductase AL538_RS21805 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AL538_RS21860 PF00675 Insulinase (Peptidase family M16) AL538_RS21860 PF05193 Peptidase M16 inactive domain AL538_RS21860 PF16187 Middle or third domain of peptidase_M16 AL538_RS21905 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AL538_RS21930 PF01578 Cytochrome C assembly protein AL538_RS21930 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AL538_RS22005 PF00771 FHIPEP family AL538_RS22065 PF01706 FliG C-terminal domain AL538_RS22065 PF14842 FliG N-terminal domain AL538_RS22065 PF14841 FliG middle domain AL538_RS22110 PF07196 Flagellin hook IN motif AL538_RS22110 PF07195 Flagellar hook-associated protein 2 C-terminus AL538_RS22110 PF02465 Flagellar hook-associated protein 2 N-terminus AL538_RS22230 PF02769 AIR synthase related protein, C-terminal domain AL538_RS22230 PF00586 AIR synthase related protein, N-terminal domain AL538_RS22265 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL538_RS22265 PF02770 Acyl-CoA dehydrogenase, middle domain AL538_RS22265 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL538_RS22265 PF09317 Domain of unknown function (DUF1974) AL538_RS22525 PF01197 Ribosomal protein L31 AL538_RS22570 PF16124 RecQ zinc-binding AL538_RS22570 PF00271 Helicase conserved C-terminal domain AL538_RS22570 PF09382 RQC domain AL538_RS22570 PF00570 HRDC domain AL538_RS22570 PF00270 DEAD/DEAH box helicase AL538_RS22695 PF06725 3D domain AL538_RS22695 PF03562 MltA specific insert domain AL538_RS22900 PF00437 Type II/IV secretion system protein AL538_RS23035 PF11987 Translation-initiation factor 2 AL538_RS23035 PF00009 Elongation factor Tu GTP binding domain AL538_RS23035 PF08364 Bacterial translation initiation factor IF-2 associated region AL538_RS23035 PF04760 Translation initiation factor IF-2, N-terminal region AL538_RS23050 PF03840 Preprotein translocase SecG subunit AL538_RS23510 PF01627 Hpt domain AL538_RS23510 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AL538_RS23510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS23510 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS23510 PF00672 HAMP domain AL538_RS23510 PF00072 Response regulator receiver domain AL538_RS23575 PF03695 Uncharacterised protein family (UPF0149) AL538_RS23615 PF05552 Conserved TM helix AL538_RS23615 PF00924 Mechanosensitive ion channel AL538_RS23645 PF02780 Transketolase, C-terminal domain AL538_RS23645 PF02779 Transketolase, pyrimidine binding domain AL538_RS23645 PF00456 Transketolase, thiamine diphosphate binding domain AL538_RS23730 PF00633 Helix-hairpin-helix motif AL538_RS23730 PF14815 NUDIX domain AL538_RS23730 PF00730 HhH-GPD superfamily base excision DNA repair protein AL538_RS23730 PF10576 Iron-sulfur binding domain of endonuclease III AL538_RS23840 PF04794 YdjC-like protein AL538_RS23920 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AL538_RS23920 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AL538_RS24015 PF18337 RapA N-terminal Tudor like domain AL538_RS24015 PF18339 RapA N-terminal Tudor like domain 1 AL538_RS24015 PF00176 SNF2 family N-terminal domain AL538_RS24015 PF12137 RNA polymerase recycling family C-terminal AL538_RS24015 PF00271 Helicase conserved C-terminal domain AL538_RS24050 PF13502 AsmA-like C-terminal region AL538_RS24050 PF13116 Protein of unknown function AL538_RS24320 PF00342 Phosphoglucose isomerase AL538_RS24465 PF02774 Semialdehyde dehydrogenase, dimerisation domain AL538_RS24465 PF01118 Semialdehyde dehydrogenase, NAD binding domain AL538_RS24570 PF02254 TrkA-N domain AL538_RS24570 PF00999 Sodium/hydrogen exchanger family AL538_RS24590 PF12848 ABC transporter AL538_RS24590 PF00005 ABC transporter AL538_RS24630 PF00202 Aminotransferase class-III AL538_RS25005 PF00474 Sodium:solute symporter family AL538_RS25040 PF12832 MFS_1 like family AL538_RS25150 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AL538_RS25150 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AL538_RS25150 PF01276 Orn/Lys/Arg decarboxylase, major domain AL538_RS25310 PF13091 PLD-like domain AL538_RS25440 PF00440 Bacterial regulatory proteins, tetR family AL538_RS25560 PF03942 DTW domain AL538_RS25805 PF00899 ThiF family AL538_RS25900 PF02386 Cation transport protein AL538_RS26050 PF02195 ParB-like nuclease domain AL538_RS26050 PF17762 HTH domain found in ParB protein AL538_RS26070 PF13932 GidA associated domain AL538_RS26070 PF01134 Glucose inhibited division protein A AL538_RS26175 PF00378 Enoyl-CoA hydratase/isomerase AL538_RS26175 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AL538_RS26175 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AL538_RS26275 PF13361 UvrD-like helicase C-terminal domain AL538_RS26275 PF00580 UvrD/REP helicase N-terminal domain AL538_RS26295 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL538_RS26295 PF00005 ABC transporter AL538_RS26400 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AL538_RS26415 PF01432 Peptidase family M3 AL538_RS26560 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AL538_RS26560 PF00476 DNA polymerase family A AL538_RS26560 PF01367 5'-3' exonuclease, C-terminal SAM fold AL538_RS26560 PF01612 3'-5' exonuclease AL538_RS26565 PF01367 5'-3' exonuclease, C-terminal SAM fold AL538_RS26565 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AL538_RS26565 PF00476 DNA polymerase family A AL538_RS26565 PF01612 3'-5' exonuclease AL538_RS26625 PF03951 Glutamine synthetase, beta-Grasp domain AL538_RS26625 PF00120 Glutamine synthetase, catalytic domain AL538_RS26795 PF13291 ACT domain AL538_RS26795 PF04607 Region found in RelA / SpoT proteins AL538_RS26795 PF02824 TGS domain AL538_RS26945 PF04002 RadC-like JAB domain AL538_RS26960 PF00884 Sulfatase AL538_RS26990 PF01075 Glycosyltransferase family 9 (heptosyltransferase)