AL538_RS00055	PWY-6167	flavin biosynthesis II (archaea)
AL538_RS00055	PWY-6168	flavin biosynthesis III (fungi)
AL538_RS00055	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AL538_RS00175	PWY-4261	glycerol degradation I
AL538_RS00470	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AL538_RS00570	PWY-6517	<i>N</i>-acetylglucosamine degradation II
AL538_RS00570	PWY-6906	chitin derivatives degradation
AL538_RS00580	PWY-6823	molybdenum cofactor biosynthesis
AL538_RS00585	PWY-5964	guanylyl molybdenum cofactor biosynthesis
AL538_RS00585	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
AL538_RS00775	PWY-3781	aerobic respiration I (cytochrome c)
AL538_RS00775	PWY-4521	arsenite oxidation I (respiratory)
AL538_RS00775	PWY-6692	Fe(II) oxidation
AL538_RS00775	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AL538_RS00780	PWY-3781	aerobic respiration I (cytochrome c)
AL538_RS00780	PWY-4521	arsenite oxidation I (respiratory)
AL538_RS00780	PWY-6692	Fe(II) oxidation
AL538_RS00780	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AL538_RS00830	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AL538_RS00830	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AL538_RS00830	PWY-5989	stearate biosynthesis II (bacteria and plants)
AL538_RS00830	PWY-5994	palmitate biosynthesis I (animals and fungi)
AL538_RS00830	PWY-6113	superpathway of mycolate biosynthesis
AL538_RS00830	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AL538_RS00830	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AL538_RS00830	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AL538_RS00830	PWY-7663	gondoate biosynthesis (anaerobic)
AL538_RS00830	PWY-7664	oleate biosynthesis IV (anaerobic)
AL538_RS00830	PWYG-321	mycolate biosynthesis
AL538_RS00855	PWY-6825	phosphatidylcholine biosynthesis V
AL538_RS00865	PWY-5686	UMP biosynthesis
AL538_RS00870	PWY-5022	4-aminobutanoate degradation V
AL538_RS00870	PWY-6728	methylaspartate cycle
AL538_RS00870	PWY-7126	ethylene biosynthesis IV
AL538_RS00915	PWY-6825	phosphatidylcholine biosynthesis V
AL538_RS00935	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AL538_RS00935	PWY-6164	3-dehydroquinate biosynthesis I
AL538_RS00935	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AL538_RS00945	PWY-5194	siroheme biosynthesis
AL538_RS00945	PWY-5441	S-methyl-L-methionine cycle
AL538_RS00945	PWY-702	L-methionine biosynthesis II
AL538_RS00945	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AL538_RS00990	PWY-2201	folate transformations I
AL538_RS01190	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AL538_RS01190	PWY-6855	chitin degradation I (archaea)
AL538_RS01190	PWY-6906	chitin derivatives degradation
AL538_RS01195	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AL538_RS01390	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AL538_RS01390	PWY-6416	quinate degradation II
AL538_RS01390	PWY-6707	gallate biosynthesis
AL538_RS01395	PWY-6409	pyoverdine I biosynthesis
AL538_RS01395	PWY-6562	norspermidine biosynthesis
AL538_RS01395	PWY-761	rhizobactin 1021 biosynthesis
AL538_RS01505	PWY-5796	malonate decarboxylase activation
AL538_RS01515	PWY-6038	citrate degradation
AL538_RS01520	PWY-5392	reductive TCA cycle II
AL538_RS01520	PWY-6038	citrate degradation
AL538_RS01540	PWY-6339	syringate degradation
AL538_RS01550	PWY-6339	syringate degradation
AL538_RS01765	PWY-4202	arsenate detoxification I (glutaredoxin)
AL538_RS01765	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AL538_RS01765	PWY-6608	guanosine nucleotides degradation III
AL538_RS01765	PWY-6609	adenine and adenosine salvage III
AL538_RS01765	PWY-6611	adenine and adenosine salvage V
AL538_RS01765	PWY-6620	guanine and guanosine salvage
AL538_RS01765	PWY-6627	salinosporamide A biosynthesis
AL538_RS01765	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
AL538_RS01765	PWY-7179	purine deoxyribonucleosides degradation I
AL538_RS01765	PWY-7179-1	purine deoxyribonucleosides degradation
AL538_RS01940	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AL538_RS01940	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AL538_RS01940	PWY-6269	adenosylcobalamin salvage from cobinamide II
AL538_RS01945	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AL538_RS01945	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AL538_RS01945	PWY-6269	adenosylcobalamin salvage from cobinamide II
AL538_RS01950	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AL538_RS01950	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AL538_RS01950	PWY-6269	adenosylcobalamin salvage from cobinamide II
AL538_RS01955	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AL538_RS01955	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AL538_RS01955	PWY-6269	adenosylcobalamin salvage from cobinamide II
AL538_RS01995	PWY-6556	pyrimidine ribonucleosides salvage II
AL538_RS01995	PWY-7181	pyrimidine deoxyribonucleosides degradation
AL538_RS01995	PWY-7193	pyrimidine ribonucleosides salvage I
AL538_RS01995	PWY-7199	pyrimidine deoxyribonucleosides salvage
AL538_RS02150	PWY-5028	L-histidine degradation II
AL538_RS02150	PWY-5030	L-histidine degradation III
AL538_RS02160	PWY-5028	L-histidine degradation II
AL538_RS02160	PWY-5030	L-histidine degradation III
AL538_RS02165	PWY-5028	L-histidine degradation II
AL538_RS02165	PWY-5030	L-histidine degradation III
AL538_RS02175	PWY-6825	phosphatidylcholine biosynthesis V
AL538_RS02215	PWY-6123	inosine-5'-phosphate biosynthesis I
AL538_RS02215	PWY-6124	inosine-5'-phosphate biosynthesis II
AL538_RS02215	PWY-7234	inosine-5'-phosphate biosynthesis III
AL538_RS02710	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AL538_RS02970	PWY-5392	reductive TCA cycle II
AL538_RS02970	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AL538_RS02970	PWY-5690	TCA cycle II (plants and fungi)
AL538_RS02970	PWY-5913	TCA cycle VI (obligate autotrophs)
AL538_RS02970	PWY-6728	methylaspartate cycle
AL538_RS02970	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL538_RS02970	PWY-7254	TCA cycle VII (acetate-producers)
AL538_RS02970	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AL538_RS02975	PWY-5958	acridone alkaloid biosynthesis
AL538_RS02975	PWY-6543	4-aminobenzoate biosynthesis
AL538_RS02975	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AL538_RS02975	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AL538_RS03065	PWY-5913	TCA cycle VI (obligate autotrophs)
AL538_RS03065	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
AL538_RS03065	PWY-6638	sulfolactate degradation III
AL538_RS03065	PWY-6642	(<i>R</i>)-cysteate degradation
AL538_RS03065	PWY-6643	coenzyme M biosynthesis II
AL538_RS03065	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AL538_RS03065	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AL538_RS03065	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AL538_RS03170	PWY-6168	flavin biosynthesis III (fungi)
AL538_RS03170	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AL538_RS03210	PWY-5674	nitrate reduction IV (dissimilatory)
AL538_RS03230	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
AL538_RS03230	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
AL538_RS03230	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
AL538_RS03230	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
AL538_RS03230	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
AL538_RS03230	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
AL538_RS03230	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
AL538_RS03230	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
AL538_RS03230	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
AL538_RS03230	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
AL538_RS03240	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AL538_RS03240	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AL538_RS03240	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AL538_RS03240	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AL538_RS03240	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL538_RS03240	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL538_RS03240	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AL538_RS03240	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AL538_RS03245	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AL538_RS03245	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AL538_RS03245	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AL538_RS03245	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AL538_RS03245	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL538_RS03245	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL538_RS03245	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AL538_RS03245	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AL538_RS03270	PWY-6562	norspermidine biosynthesis
AL538_RS03280	PWY-6409	pyoverdine I biosynthesis
AL538_RS03280	PWY-6562	norspermidine biosynthesis
AL538_RS03280	PWY-761	rhizobactin 1021 biosynthesis
AL538_RS03310	PWY-5269	cardiolipin biosynthesis II
AL538_RS03310	PWY-5668	cardiolipin biosynthesis I
AL538_RS03370	PWY-5958	acridone alkaloid biosynthesis
AL538_RS03370	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AL538_RS03370	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AL538_RS03375	PWY-5958	acridone alkaloid biosynthesis
AL538_RS03375	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AL538_RS03375	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AL538_RS03405	PWY-6157	autoinducer AI-1 biosynthesis
AL538_RS03440	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AL538_RS03440	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AL538_RS03440	PWY-6936	seleno-amino acid biosynthesis
AL538_RS03440	PWY-702	L-methionine biosynthesis II
AL538_RS03565	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AL538_RS03565	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AL538_RS03565	PWY-6936	seleno-amino acid biosynthesis
AL538_RS03565	PWY-702	L-methionine biosynthesis II
AL538_RS03745	PWY-5686	UMP biosynthesis
AL538_RS03770	PWY-7205	CMP phosphorylation
AL538_RS03830	PWY-1042	glycolysis IV (plant cytosol)
AL538_RS03830	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AL538_RS03830	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL538_RS03830	PWY-5723	Rubisco shunt
AL538_RS03830	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL538_RS03830	PWY-6886	1-butanol autotrophic biosynthesis
AL538_RS03830	PWY-6901	superpathway of glucose and xylose degradation
AL538_RS03830	PWY-7003	glycerol degradation to butanol
AL538_RS03830	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AL538_RS03830	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AL538_RS03870	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AL538_RS03870	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AL538_RS03870	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL538_RS03870	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AL538_RS03870	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AL538_RS03870	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AL538_RS03880	PWY-6543	4-aminobenzoate biosynthesis
AL538_RS03895	PWY-5367	petroselinate biosynthesis
AL538_RS03895	PWY-5515	L-arabinose degradation II
AL538_RS03895	PWY-5525	D-glucuronate degradation I
AL538_RS03895	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AL538_RS03895	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AL538_RS03895	PWY-5989	stearate biosynthesis II (bacteria and plants)
AL538_RS03895	PWY-5994	palmitate biosynthesis I (animals and fungi)
AL538_RS03895	PWY-6113	superpathway of mycolate biosynthesis
AL538_RS03895	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AL538_RS03895	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AL538_RS03895	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AL538_RS03895	PWY-7663	gondoate biosynthesis (anaerobic)
AL538_RS03895	PWY-7664	oleate biosynthesis IV (anaerobic)
AL538_RS03895	PWYG-321	mycolate biosynthesis
AL538_RS03900	PWY-4381	fatty acid biosynthesis initiation I
AL538_RS03900	PWY-6799	fatty acid biosynthesis (plant mitochondria)
AL538_RS03900	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AL538_RS03905	PWY-4381	fatty acid biosynthesis initiation I
AL538_RS03955	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AL538_RS03955	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AL538_RS03955	PWY-6268	adenosylcobalamin salvage from cobalamin
AL538_RS03955	PWY-6269	adenosylcobalamin salvage from cobinamide II
AL538_RS03965	PWY-7193	pyrimidine ribonucleosides salvage I
AL538_RS04015	PWY-842	starch degradation I
AL538_RS04045	PWY-5482	pyruvate fermentation to acetate II
AL538_RS04045	PWY-5485	pyruvate fermentation to acetate IV
AL538_RS04045	PWY-5497	purine nucleobases degradation II (anaerobic)
AL538_RS04050	PWY-1281	sulfoacetaldehyde degradation I
AL538_RS04050	PWY-5482	pyruvate fermentation to acetate II
AL538_RS04050	PWY-5485	pyruvate fermentation to acetate IV
AL538_RS04050	PWY-5497	purine nucleobases degradation II (anaerobic)
AL538_RS04050	PWY-6637	sulfolactate degradation II
AL538_RS04060	PWY-4061	glutathione-mediated detoxification I
AL538_RS04060	PWY-6842	glutathione-mediated detoxification II
AL538_RS04060	PWY-7112	4-hydroxy-2-nonenal detoxification
AL538_RS04060	PWY-7533	gliotoxin biosynthesis
AL538_RS04090	PWY-6823	molybdenum cofactor biosynthesis
AL538_RS04110	PWY-6823	molybdenum cofactor biosynthesis
AL538_RS04140	PWY-5480	pyruvate fermentation to ethanol I
AL538_RS04140	PWY-5485	pyruvate fermentation to acetate IV
AL538_RS04140	PWY-5493	reductive monocarboxylic acid cycle
AL538_RS04180	PWY-5386	methylglyoxal degradation I
AL538_RS04535	PWY-6854	ethylene biosynthesis III (microbes)
AL538_RS04550	PWY-3162	L-tryptophan degradation V (side chain pathway)
AL538_RS04550	PWY-5057	L-valine degradation II
AL538_RS04550	PWY-5076	L-leucine degradation III
AL538_RS04550	PWY-5078	L-isoleucine degradation II
AL538_RS04550	PWY-5079	L-phenylalanine degradation III
AL538_RS04550	PWY-5082	L-methionine degradation III
AL538_RS04550	PWY-5162	2-oxopentenoate degradation
AL538_RS04550	PWY-5436	L-threonine degradation IV
AL538_RS04550	PWY-5480	pyruvate fermentation to ethanol I
AL538_RS04550	PWY-5486	pyruvate fermentation to ethanol II
AL538_RS04550	PWY-5751	phenylethanol biosynthesis
AL538_RS04550	PWY-6313	serotonin degradation
AL538_RS04550	PWY-6333	acetaldehyde biosynthesis I
AL538_RS04550	PWY-6342	noradrenaline and adrenaline degradation
AL538_RS04550	PWY-6587	pyruvate fermentation to ethanol III
AL538_RS04550	PWY-6802	salidroside biosynthesis
AL538_RS04550	PWY-6871	3-methylbutanol biosynthesis
AL538_RS04550	PWY-7013	L-1,2-propanediol degradation
AL538_RS04550	PWY-7085	triethylamine degradation
AL538_RS04550	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AL538_RS04550	PWY-7118	chitin degradation to ethanol
AL538_RS04550	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
AL538_RS04550	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AL538_RS04565	PWY-2941	L-lysine biosynthesis II
AL538_RS04565	PWY-2942	L-lysine biosynthesis III
AL538_RS04565	PWY-5097	L-lysine biosynthesis VI
AL538_RS04565	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL538_RS04565	PWY-6559	spermidine biosynthesis II
AL538_RS04565	PWY-6562	norspermidine biosynthesis
AL538_RS04565	PWY-7153	grixazone biosynthesis
AL538_RS04565	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL538_RS04660	PWY-1042	glycolysis IV (plant cytosol)
AL538_RS04660	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL538_RS04660	PWY-6901	superpathway of glucose and xylose degradation
AL538_RS04660	PWY-7003	glycerol degradation to butanol
AL538_RS04700	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AL538_RS04700	PWY-5491	diethylphosphate degradation
AL538_RS04785	PWY-6605	adenine and adenosine salvage II
AL538_RS04785	PWY-6610	adenine and adenosine salvage IV
AL538_RS04805	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AL538_RS04805	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AL538_RS04805	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AL538_RS04805	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AL538_RS04820	PWY-2161	folate polyglutamylation
AL538_RS04825	PWY-4381	fatty acid biosynthesis initiation I
AL538_RS04825	PWY-5743	3-hydroxypropanoate cycle
AL538_RS04825	PWY-5744	glyoxylate assimilation
AL538_RS04825	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AL538_RS04825	PWY-6679	jadomycin biosynthesis
AL538_RS04825	PWY-6722	candicidin biosynthesis
AL538_RS04825	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AL538_RS04840	PWY-2941	L-lysine biosynthesis II
AL538_RS04840	PWY-2942	L-lysine biosynthesis III
AL538_RS04840	PWY-5097	L-lysine biosynthesis VI
AL538_RS04840	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL538_RS04840	PWY-6559	spermidine biosynthesis II
AL538_RS04840	PWY-6562	norspermidine biosynthesis
AL538_RS04840	PWY-7153	grixazone biosynthesis
AL538_RS04840	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL538_RS04845	PWY-181	photorespiration
AL538_RS04880	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AL538_RS04905	PWY-1361	benzoyl-CoA degradation I (aerobic)
AL538_RS04905	PWY-5109	2-methylbutanoate biosynthesis
AL538_RS04905	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AL538_RS04905	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AL538_RS04905	PWY-5177	glutaryl-CoA degradation
AL538_RS04905	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AL538_RS04905	PWY-6435	4-hydroxybenzoate biosynthesis V
AL538_RS04905	PWY-6583	pyruvate fermentation to butanol I
AL538_RS04905	PWY-6863	pyruvate fermentation to hexanol
AL538_RS04905	PWY-6883	pyruvate fermentation to butanol II
AL538_RS04905	PWY-6944	androstenedione degradation
AL538_RS04905	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AL538_RS04905	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AL538_RS04905	PWY-7007	methyl ketone biosynthesis
AL538_RS04905	PWY-7046	4-coumarate degradation (anaerobic)
AL538_RS04905	PWY-7094	fatty acid salvage
AL538_RS04905	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AL538_RS04905	PWY-735	jasmonic acid biosynthesis
AL538_RS04905	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AL538_RS04905	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AL538_RS04905	PWY-7726	AL538_RS04905
AL538_RS04910	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AL538_RS04910	PWY-6435	4-hydroxybenzoate biosynthesis V
AL538_RS04910	PWY-6863	pyruvate fermentation to hexanol
AL538_RS04910	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AL538_RS04910	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AL538_RS04910	PWY-6948	sitosterol degradation to androstenedione
AL538_RS04910	PWY-7094	fatty acid salvage
AL538_RS04910	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
AL538_RS04910	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
AL538_RS04910	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
AL538_RS04910	PWY-7339	10-<i>trans</i>-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
AL538_RS04910	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
AL538_RS04910	PWY-735	jasmonic acid biosynthesis
AL538_RS04910	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AL538_RS04910	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AL538_RS04910	PWY-7726	AL538_RS04910
AL538_RS05100	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AL538_RS05245	PWY-2941	L-lysine biosynthesis II
AL538_RS05245	PWY-2942	L-lysine biosynthesis III
AL538_RS05245	PWY-5097	L-lysine biosynthesis VI
AL538_RS05275	PWY-4202	arsenate detoxification I (glutaredoxin)
AL538_RS05275	PWY-4621	arsenate detoxification II (glutaredoxin)
AL538_RS05280	PWY-7731	AL538_RS05280
AL538_RS05300	PWY-7183	pyrimidine nucleobases salvage I
AL538_RS05305	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AL538_RS05305	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AL538_RS05305	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AL538_RS05310	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AL538_RS05310	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AL538_RS05320	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
AL538_RS05360	PWY-5386	methylglyoxal degradation I
AL538_RS05395	PWY-4381	fatty acid biosynthesis initiation I
AL538_RS05395	PWY-5743	3-hydroxypropanoate cycle
AL538_RS05395	PWY-5744	glyoxylate assimilation
AL538_RS05395	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AL538_RS05395	PWY-6679	jadomycin biosynthesis
AL538_RS05395	PWY-6722	candicidin biosynthesis
AL538_RS05395	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AL538_RS05410	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AL538_RS05410	PWY-622	starch biosynthesis
AL538_RS05420	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AL538_RS05420	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AL538_RS05420	PWY-5989	stearate biosynthesis II (bacteria and plants)
AL538_RS05420	PWY-5994	palmitate biosynthesis I (animals and fungi)
AL538_RS05420	PWY-6113	superpathway of mycolate biosynthesis
AL538_RS05420	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AL538_RS05420	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AL538_RS05420	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AL538_RS05420	PWY-7663	gondoate biosynthesis (anaerobic)
AL538_RS05420	PWY-7664	oleate biosynthesis IV (anaerobic)
AL538_RS05420	PWYG-321	mycolate biosynthesis
AL538_RS05445	PWY-7294	xylose degradation IV
AL538_RS05445	PWY-7295	L-arabinose degradation IV
AL538_RS05445	PWY-7560	methylerythritol phosphate pathway II
AL538_RS05450	PWY-5667	CDP-diacylglycerol biosynthesis I
AL538_RS05450	PWY-5981	CDP-diacylglycerol biosynthesis III
AL538_RS05535	PWY-4381	fatty acid biosynthesis initiation I
AL538_RS05605	PWY-6902	chitin degradation II
AL538_RS05680	PWY-6825	phosphatidylcholine biosynthesis V
AL538_RS05725	PWY-6654	phosphopantothenate biosynthesis III
AL538_RS05735	PWY-6823	molybdenum cofactor biosynthesis
AL538_RS05735	PWY-6891	thiazole biosynthesis II (Bacillus)
AL538_RS05735	PWY-6892	thiazole biosynthesis I (E. coli)
AL538_RS05735	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AL538_RS05760	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL538_RS05835	PWY-4261	glycerol degradation I
AL538_RS05845	PWY-4261	glycerol degradation I
AL538_RS05845	PWY-6118	glycerol-3-phosphate shuttle
AL538_RS05845	PWY-6952	glycerophosphodiester degradation
AL538_RS05880	PWY-6317	galactose degradation I (Leloir pathway)
AL538_RS05885	PWY-3821	galactose degradation III
AL538_RS05885	PWY-6317	galactose degradation I (Leloir pathway)
AL538_RS05885	PWY-6527	stachyose degradation
AL538_RS05890	PWY-6317	galactose degradation I (Leloir pathway)
AL538_RS05890	PWY-6527	stachyose degradation
AL538_RS05895	PWY-3821	galactose degradation III
AL538_RS05895	PWY-6317	galactose degradation I (Leloir pathway)
AL538_RS05895	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
AL538_RS05895	PWY-6527	stachyose degradation
AL538_RS05895	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
AL538_RS05895	PWY-7344	UDP-D-galactose biosynthesis
AL538_RS05915	PWY-6807	xyloglucan degradation II (exoglucanase)
AL538_RS06060	PWY-4202	arsenate detoxification I (glutaredoxin)
AL538_RS06060	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AL538_RS06060	PWY-6608	guanosine nucleotides degradation III
AL538_RS06060	PWY-6609	adenine and adenosine salvage III
AL538_RS06060	PWY-6611	adenine and adenosine salvage V
AL538_RS06060	PWY-6620	guanine and guanosine salvage
AL538_RS06060	PWY-6627	salinosporamide A biosynthesis
AL538_RS06060	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
AL538_RS06060	PWY-7179	purine deoxyribonucleosides degradation I
AL538_RS06060	PWY-7179-1	purine deoxyribonucleosides degradation
AL538_RS06065	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
AL538_RS06070	PWY-7181	pyrimidine deoxyribonucleosides degradation
AL538_RS06075	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
AL538_RS06205	PWY-6749	CMP-legionaminate biosynthesis I
AL538_RS06210	PWY-6614	tetrahydrofolate biosynthesis
AL538_RS06240	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AL538_RS06240	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AL538_RS06275	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AL538_RS06285	PWY-6825	phosphatidylcholine biosynthesis V
AL538_RS06325	PWY-6788	cellulose degradation II (fungi)
AL538_RS06335	PWY-6902	chitin degradation II
AL538_RS06345	PWY-6749	CMP-legionaminate biosynthesis I
AL538_RS06380	PWY-5747	2-methylcitrate cycle II
AL538_RS06390	PWY-1001	cellulose biosynthesis
AL538_RS06390	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AL538_RS06390	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AL538_RS06390	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AL538_RS06390	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AL538_RS06420	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AL538_RS06420	PWY-6148	tetrahydromethanopterin biosynthesis
AL538_RS06420	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AL538_RS06420	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AL538_RS06425	PWY-6654	phosphopantothenate biosynthesis III
AL538_RS06455	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AL538_RS06455	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL538_RS06455	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AL538_RS06455	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AL538_RS06460	PWY-6599	guanine and guanosine salvage II
AL538_RS06460	PWY-6609	adenine and adenosine salvage III
AL538_RS06460	PWY-6610	adenine and adenosine salvage IV
AL538_RS06460	PWY-6620	guanine and guanosine salvage
AL538_RS06470	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AL538_RS06470	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AL538_RS06480	PWY-6891	thiazole biosynthesis II (Bacillus)
AL538_RS06480	PWY-6892	thiazole biosynthesis I (E. coli)
AL538_RS06480	PWY-7560	methylerythritol phosphate pathway II
AL538_RS06495	PWY-5316	nicotine biosynthesis
AL538_RS06495	PWY-5381	pyridine nucleotide cycling (plants)
AL538_RS06495	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AL538_RS06495	PWY-7342	superpathway of nicotine biosynthesis
AL538_RS06545	PWY-6829	tRNA methylation (yeast)
AL538_RS06545	PWY-7285	methylwyosine biosynthesis
AL538_RS06545	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
AL538_RS06575	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AL538_RS06575	PWY-6153	autoinducer AI-2 biosynthesis I
AL538_RS06575	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
AL538_RS06585	PWY-6840	homoglutathione biosynthesis
AL538_RS06585	PWY-7255	ergothioneine biosynthesis I (bacteria)
AL538_RS06605	PWY-6339	syringate degradation
AL538_RS06615	PWY-6339	syringate degradation
AL538_RS06675	PWY-2941	L-lysine biosynthesis II
AL538_RS06675	PWY-2942	L-lysine biosynthesis III
AL538_RS06675	PWY-5097	L-lysine biosynthesis VI
AL538_RS06675	PWY-6559	spermidine biosynthesis II
AL538_RS06675	PWY-6562	norspermidine biosynthesis
AL538_RS06675	PWY-7153	grixazone biosynthesis
AL538_RS06720	PWY-5381	pyridine nucleotide cycling (plants)
AL538_RS06720	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AL538_RS06720	PWY-6596	adenosine nucleotides degradation I
AL538_RS06720	PWY-6606	guanosine nucleotides degradation II
AL538_RS06720	PWY-6607	guanosine nucleotides degradation I
AL538_RS06720	PWY-6608	guanosine nucleotides degradation III
AL538_RS06720	PWY-7185	UTP and CTP dephosphorylation I
AL538_RS06730	PWY-7560	methylerythritol phosphate pathway II
AL538_RS06735	PWY-7560	methylerythritol phosphate pathway II
AL538_RS06745	PWY-1042	glycolysis IV (plant cytosol)
AL538_RS06745	PWY-1622	formaldehyde assimilation I (serine pathway)
AL538_RS06745	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AL538_RS06745	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL538_RS06745	PWY-5723	Rubisco shunt
AL538_RS06745	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL538_RS06745	PWY-6886	1-butanol autotrophic biosynthesis
AL538_RS06745	PWY-6901	superpathway of glucose and xylose degradation
AL538_RS06745	PWY-7003	glycerol degradation to butanol
AL538_RS06745	PWY-7124	ethylene biosynthesis V (engineered)
AL538_RS06745	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AL538_RS06750	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AL538_RS06750	PWY-7177	UTP and CTP dephosphorylation II
AL538_RS06750	PWY-7185	UTP and CTP dephosphorylation I
AL538_RS06775	PWY-6012	acyl carrier protein metabolism I
AL538_RS06775	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AL538_RS06830	PWY-5316	nicotine biosynthesis
AL538_RS06830	PWY-7342	superpathway of nicotine biosynthesis
AL538_RS06890	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AL538_RS06890	PWY-5723	Rubisco shunt
AL538_RS06925	PWY-1042	glycolysis IV (plant cytosol)
AL538_RS06925	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AL538_RS06925	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL538_RS06925	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL538_RS06925	PWY-7385	1,3-propanediol biosynthesis (engineered)
AL538_RS06930	PWY-1042	glycolysis IV (plant cytosol)
AL538_RS06930	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL538_RS06930	PWY-6886	1-butanol autotrophic biosynthesis
AL538_RS06930	PWY-6901	superpathway of glucose and xylose degradation
AL538_RS06930	PWY-7003	glycerol degradation to butanol
AL538_RS06945	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AL538_RS06945	PWY-5723	Rubisco shunt
AL538_RS06945	PWY-6891	thiazole biosynthesis II (Bacillus)
AL538_RS06945	PWY-6892	thiazole biosynthesis I (E. coli)
AL538_RS06945	PWY-6901	superpathway of glucose and xylose degradation
AL538_RS06945	PWY-7560	methylerythritol phosphate pathway II
AL538_RS06950	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AL538_RS06950	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
AL538_RS06970	PWY-2201	folate transformations I
AL538_RS07000	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AL538_RS07005	PWY-3341	L-proline biosynthesis III
AL538_RS07005	PWY-4981	L-proline biosynthesis II (from arginine)
AL538_RS07005	PWY-6344	L-ornithine degradation II (Stickland reaction)
AL538_RS07025	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
AL538_RS07040	PWY-6825	phosphatidylcholine biosynthesis V
AL538_RS07280	PWY-4981	L-proline biosynthesis II (from arginine)
AL538_RS07285	PWY-4981	L-proline biosynthesis II (from arginine)
AL538_RS07285	PWY-4984	urea cycle
AL538_RS07285	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL538_RS07290	PWY-5686	UMP biosynthesis
AL538_RS07305	PWY-5667	CDP-diacylglycerol biosynthesis I
AL538_RS07305	PWY-5981	CDP-diacylglycerol biosynthesis III
AL538_RS07305	PWY-6453	stigma estolide biosynthesis
AL538_RS07305	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AL538_RS07305	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
AL538_RS07305	PWY-7587	oleate biosynthesis III (cyanobacteria)
AL538_RS07305	PWY-7589	palmitoleate biosynthesis III (cyanobacteria)
AL538_RS07310	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AL538_RS07310	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AL538_RS07570	PWY-3801	sucrose degradation II (sucrose synthase)
AL538_RS07570	PWY-6527	stachyose degradation
AL538_RS07570	PWY-7238	sucrose biosynthesis II
AL538_RS07570	PWY-7343	UDP-glucose biosynthesis
AL538_RS07585	PWY-6832	2-aminoethylphosphonate degradation II
AL538_RS07590	PWY-2941	L-lysine biosynthesis II
AL538_RS07590	PWY-2942	L-lysine biosynthesis III
AL538_RS07590	PWY-5097	L-lysine biosynthesis VI
AL538_RS07590	PWY-6559	spermidine biosynthesis II
AL538_RS07590	PWY-6562	norspermidine biosynthesis
AL538_RS07590	PWY-7153	grixazone biosynthesis
AL538_RS07595	PWY-2201	folate transformations I
AL538_RS07595	PWY-3841	folate transformations II
AL538_RS07655	PWY-6683	sulfate reduction III (assimilatory)
AL538_RS07660	PWY-6683	sulfate reduction III (assimilatory)
AL538_RS07695	PWY-3801	sucrose degradation II (sucrose synthase)
AL538_RS07695	PWY-5054	sorbitol biosynthesis I
AL538_RS07695	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
AL538_RS07695	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AL538_RS07695	PWY-5659	GDP-mannose biosynthesis
AL538_RS07695	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL538_RS07695	PWY-621	sucrose degradation III (sucrose invertase)
AL538_RS07695	PWY-622	starch biosynthesis
AL538_RS07695	PWY-6981	chitin biosynthesis
AL538_RS07695	PWY-6992	1,5-anhydrofructose degradation
AL538_RS07695	PWY-7238	sucrose biosynthesis II
AL538_RS07695	PWY-7347	sucrose biosynthesis III
AL538_RS07695	PWY-7385	1,3-propanediol biosynthesis (engineered)
AL538_RS07710	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AL538_RS07740	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AL538_RS07740	PWY-5723	Rubisco shunt
AL538_RS07755	PWY-6164	3-dehydroquinate biosynthesis I
AL538_RS07760	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AL538_RS07815	PWY-4983	L-citrulline-nitric oxide cycle
AL538_RS07815	PWY-4984	urea cycle
AL538_RS07815	PWY-5	canavanine biosynthesis
AL538_RS07815	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL538_RS07815	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL538_RS07820	PWY-4983	L-citrulline-nitric oxide cycle
AL538_RS07820	PWY-4984	urea cycle
AL538_RS07820	PWY-5	canavanine biosynthesis
AL538_RS07820	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL538_RS07820	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL538_RS07825	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL538_RS07825	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL538_RS07830	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL538_RS07830	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL538_RS07835	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL538_RS07840	PWY-1622	formaldehyde assimilation I (serine pathway)
AL538_RS07840	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AL538_RS07840	PWY-5913	TCA cycle VI (obligate autotrophs)
AL538_RS07840	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL538_RS07840	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
AL538_RS07840	PWY-6549	L-glutamine biosynthesis III
AL538_RS07840	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AL538_RS07840	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AL538_RS07840	PWY-7124	ethylene biosynthesis V (engineered)
AL538_RS07850	PWY-2201	folate transformations I
AL538_RS07850	PWY-3841	folate transformations II
AL538_RS07855	PWY-2941	L-lysine biosynthesis II
AL538_RS07855	PWY-2942	L-lysine biosynthesis III
AL538_RS07855	PWY-5097	L-lysine biosynthesis VI
AL538_RS07855	PWY-6559	spermidine biosynthesis II
AL538_RS07855	PWY-6562	norspermidine biosynthesis
AL538_RS07855	PWY-7153	grixazone biosynthesis
AL538_RS07960	PWY-7731	AL538_RS07960
AL538_RS07985	PWY-5723	Rubisco shunt
AL538_RS08015	PWY-5958	acridone alkaloid biosynthesis
AL538_RS08015	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AL538_RS08015	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AL538_RS08040	PWY-181	photorespiration
AL538_RS08070	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AL538_RS08100	PWY-2781	<i>cis</i>-zeatin biosynthesis
AL538_RS08120	PWY-6700	queuosine biosynthesis
AL538_RS08195	PWY-5669	phosphatidylethanolamine biosynthesis I
AL538_RS08215	PWY-1042	glycolysis IV (plant cytosol)
AL538_RS08215	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AL538_RS08215	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL538_RS08215	PWY-5723	Rubisco shunt
AL538_RS08215	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL538_RS08215	PWY-6886	1-butanol autotrophic biosynthesis
AL538_RS08215	PWY-6901	superpathway of glucose and xylose degradation
AL538_RS08215	PWY-7003	glycerol degradation to butanol
AL538_RS08215	PWY-7124	ethylene biosynthesis V (engineered)
AL538_RS08215	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AL538_RS08230	PWY-5667	CDP-diacylglycerol biosynthesis I
AL538_RS08230	PWY-5981	CDP-diacylglycerol biosynthesis III
AL538_RS08235	PWY-6936	seleno-amino acid biosynthesis
AL538_RS08235	PWY-7274	D-cycloserine biosynthesis
AL538_RS08265	PWY-3781	aerobic respiration I (cytochrome c)
AL538_RS08265	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AL538_RS08265	PWY-5392	reductive TCA cycle II
AL538_RS08265	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AL538_RS08265	PWY-5690	TCA cycle II (plants and fungi)
AL538_RS08265	PWY-5913	TCA cycle VI (obligate autotrophs)
AL538_RS08265	PWY-6728	methylaspartate cycle
AL538_RS08265	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL538_RS08265	PWY-7254	TCA cycle VII (acetate-producers)
AL538_RS08265	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AL538_RS08265	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AL538_RS08270	PWY-3781	aerobic respiration I (cytochrome c)
AL538_RS08270	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AL538_RS08270	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AL538_RS08270	PWY-5690	TCA cycle II (plants and fungi)
AL538_RS08270	PWY-6728	methylaspartate cycle
AL538_RS08270	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL538_RS08270	PWY-7254	TCA cycle VII (acetate-producers)
AL538_RS08270	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AL538_RS08355	PWY-1042	glycolysis IV (plant cytosol)
AL538_RS08355	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AL538_RS08355	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL538_RS08355	PWY-7385	1,3-propanediol biosynthesis (engineered)
AL538_RS08380	PWY-6854	ethylene biosynthesis III (microbes)
AL538_RS08385	PWY-6004	glycine betaine biosynthesis V (from glycine)
AL538_RS08395	PWY-5392	reductive TCA cycle II
AL538_RS08395	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AL538_RS08395	PWY-5690	TCA cycle II (plants and fungi)
AL538_RS08395	PWY-5913	TCA cycle VI (obligate autotrophs)
AL538_RS08395	PWY-6728	methylaspartate cycle
AL538_RS08395	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL538_RS08395	PWY-7254	TCA cycle VII (acetate-producers)
AL538_RS08395	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AL538_RS08440	PWY-5392	reductive TCA cycle II
AL538_RS08440	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AL538_RS08440	PWY-5690	TCA cycle II (plants and fungi)
AL538_RS08440	PWY-5913	TCA cycle VI (obligate autotrophs)
AL538_RS08440	PWY-6728	methylaspartate cycle
AL538_RS08440	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL538_RS08440	PWY-7254	TCA cycle VII (acetate-producers)
AL538_RS08440	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AL538_RS08465	PWY-6672	<i>cis</i>-genanyl-CoA degradation
AL538_RS08465	PWY-7118	chitin degradation to ethanol
AL538_RS08470	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AL538_RS08470	PWY-6416	quinate degradation II
AL538_RS08470	PWY-6707	gallate biosynthesis
AL538_RS08585	PWY-6123	inosine-5'-phosphate biosynthesis I
AL538_RS08585	PWY-6124	inosine-5'-phosphate biosynthesis II
AL538_RS08585	PWY-7234	inosine-5'-phosphate biosynthesis III
AL538_RS08590	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AL538_RS08590	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AL538_RS08590	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AL538_RS08625	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
AL538_RS08625	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AL538_RS08640	PWY-5381	pyridine nucleotide cycling (plants)
AL538_RS08715	PWY-3961	phosphopantothenate biosynthesis II
AL538_RS08725	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AL538_RS08725	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AL538_RS08735	PWY-5269	cardiolipin biosynthesis II
AL538_RS08735	PWY-5668	cardiolipin biosynthesis I
AL538_RS08810	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AL538_RS08810	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AL538_RS08815	PWY-6482	diphthamide biosynthesis (archaea)
AL538_RS08815	PWY-7546	diphthamide biosynthesis (eukaryotes)
AL538_RS08930	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AL538_RS08950	PWY-5667	CDP-diacylglycerol biosynthesis I
AL538_RS08950	PWY-6453	stigma estolide biosynthesis
AL538_RS08950	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AL538_RS08950	PWY-7587	oleate biosynthesis III (cyanobacteria)
AL538_RS08960	PWY-5755	4-hydroxybenzoate biosynthesis II (microbes)
AL538_RS08960	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
AL538_RS08960	PWY-6148	tetrahydromethanopterin biosynthesis
AL538_RS08975	PWY-5350	thiosulfate disproportionation III (rhodanese)
AL538_RS09000	PWY-6825	phosphatidylcholine biosynthesis V
AL538_RS09055	PWY-1042	glycolysis IV (plant cytosol)
AL538_RS09055	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL538_RS09055	PWY-6901	superpathway of glucose and xylose degradation
AL538_RS09055	PWY-7003	glycerol degradation to butanol
AL538_RS09120	PWY-2941	L-lysine biosynthesis II
AL538_RS09120	PWY-5097	L-lysine biosynthesis VI
AL538_RS09125	PWY-2941	L-lysine biosynthesis II
AL538_RS09125	PWY-2942	L-lysine biosynthesis III
AL538_RS09125	PWY-5097	L-lysine biosynthesis VI
AL538_RS09145	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AL538_RS09145	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AL538_RS09150	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AL538_RS09150	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AL538_RS09205	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
AL538_RS09205	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
AL538_RS09205	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
AL538_RS09205	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
AL538_RS09205	PWY-6978	plastoquinol-9 biosynthesis II
AL538_RS09215	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AL538_RS09265	PWY-4041	&gamma;-glutamyl cycle
AL538_RS09265	PWY-5826	hypoglycin biosynthesis
AL538_RS09320	PWY-6892	thiazole biosynthesis I (E. coli)
AL538_RS09320	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AL538_RS09325	PWY-6891	thiazole biosynthesis II (Bacillus)
AL538_RS09325	PWY-6892	thiazole biosynthesis I (E. coli)
AL538_RS09340	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AL538_RS09340	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AL538_RS09340	PWY-6897	thiamin salvage II
AL538_RS09340	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AL538_RS09340	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AL538_RS09340	PWY-7356	thiamin salvage IV (yeast)
AL538_RS09340	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AL538_RS09345	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
AL538_RS09410	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AL538_RS09415	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
AL538_RS09415	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AL538_RS09425	PWY-6123	inosine-5'-phosphate biosynthesis I
AL538_RS09425	PWY-7234	inosine-5'-phosphate biosynthesis III
AL538_RS09465	PWY-6825	phosphatidylcholine biosynthesis V
AL538_RS09535	PWY-5101	L-isoleucine biosynthesis II
AL538_RS09535	PWY-5103	L-isoleucine biosynthesis III
AL538_RS09535	PWY-5104	L-isoleucine biosynthesis IV
AL538_RS09535	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AL538_RS09535	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AL538_RS09535	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AL538_RS09535	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AL538_RS09545	PWY-5057	L-valine degradation II
AL538_RS09545	PWY-5076	L-leucine degradation III
AL538_RS09545	PWY-5078	L-isoleucine degradation II
AL538_RS09545	PWY-5101	L-isoleucine biosynthesis II
AL538_RS09545	PWY-5103	L-isoleucine biosynthesis III
AL538_RS09545	PWY-5104	L-isoleucine biosynthesis IV
AL538_RS09545	PWY-5108	L-isoleucine biosynthesis V
AL538_RS09550	PWY-5101	L-isoleucine biosynthesis II
AL538_RS09550	PWY-5103	L-isoleucine biosynthesis III
AL538_RS09550	PWY-5104	L-isoleucine biosynthesis IV
AL538_RS09550	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AL538_RS09580	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AL538_RS09580	PWY-5667	CDP-diacylglycerol biosynthesis I
AL538_RS09580	PWY-6453	stigma estolide biosynthesis
AL538_RS09580	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AL538_RS09580	PWY-7587	oleate biosynthesis III (cyanobacteria)
AL538_RS09590	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AL538_RS09600	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AL538_RS09765	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AL538_RS09765	PWY-6435	4-hydroxybenzoate biosynthesis V
AL538_RS09765	PWY-6863	pyruvate fermentation to hexanol
AL538_RS09765	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AL538_RS09765	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AL538_RS09765	PWY-6948	sitosterol degradation to androstenedione
AL538_RS09765	PWY-7094	fatty acid salvage
AL538_RS09765	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
AL538_RS09765	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
AL538_RS09765	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
AL538_RS09765	PWY-7339	10-<i>trans</i>-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
AL538_RS09765	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
AL538_RS09765	PWY-735	jasmonic acid biosynthesis
AL538_RS09765	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AL538_RS09765	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AL538_RS09765	PWY-7726	AL538_RS09765
AL538_RS09770	PWY-1361	benzoyl-CoA degradation I (aerobic)
AL538_RS09770	PWY-5109	2-methylbutanoate biosynthesis
AL538_RS09770	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AL538_RS09770	PWY-5137	fatty acid &beta;-oxidation III (unsaturated, odd number)
AL538_RS09770	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AL538_RS09770	PWY-5177	glutaryl-CoA degradation
AL538_RS09770	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AL538_RS09770	PWY-6435	4-hydroxybenzoate biosynthesis V
AL538_RS09770	PWY-6583	pyruvate fermentation to butanol I
AL538_RS09770	PWY-6837	fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)
AL538_RS09770	PWY-6863	pyruvate fermentation to hexanol
AL538_RS09770	PWY-6883	pyruvate fermentation to butanol II
AL538_RS09770	PWY-6944	androstenedione degradation
AL538_RS09770	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AL538_RS09770	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AL538_RS09770	PWY-7007	methyl ketone biosynthesis
AL538_RS09770	PWY-7046	4-coumarate degradation (anaerobic)
AL538_RS09770	PWY-7094	fatty acid salvage
AL538_RS09770	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AL538_RS09770	PWY-7291	oleate &beta;-oxidation (isomerase-dependent, yeast)
AL538_RS09770	PWY-735	jasmonic acid biosynthesis
AL538_RS09770	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AL538_RS09770	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AL538_RS09770	PWY-7726	AL538_RS09770
AL538_RS09830	PWY-5103	L-isoleucine biosynthesis III
AL538_RS09830	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AL538_RS09975	PWY-5101	L-isoleucine biosynthesis II
AL538_RS09975	PWY-5103	L-isoleucine biosynthesis III
AL538_RS09975	PWY-5104	L-isoleucine biosynthesis IV
AL538_RS09975	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AL538_RS09980	PWY-5530	sorbitol biosynthesis II
AL538_RS09980	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AL538_RS09990	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AL538_RS09990	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AL538_RS09990	PWY-7242	D-fructuronate degradation
AL538_RS09990	PWY-7310	D-glucosaminate degradation
AL538_RS09990	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
AL538_RS09995	PWY-4081	glutathione redox reactions I
AL538_RS10090	PWY-5839	menaquinol-7 biosynthesis
AL538_RS10090	PWY-5844	menaquinol-9 biosynthesis
AL538_RS10090	PWY-5849	menaquinol-6 biosynthesis
AL538_RS10090	PWY-5890	menaquinol-10 biosynthesis
AL538_RS10090	PWY-5891	menaquinol-11 biosynthesis
AL538_RS10090	PWY-5892	menaquinol-12 biosynthesis
AL538_RS10090	PWY-5895	menaquinol-13 biosynthesis
AL538_RS10125	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AL538_RS10125	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AL538_RS10170	PWY-6609	adenine and adenosine salvage III
AL538_RS10170	PWY-6611	adenine and adenosine salvage V
AL538_RS10170	PWY-7179	purine deoxyribonucleosides degradation I
AL538_RS10170	PWY-7179-1	purine deoxyribonucleosides degradation
AL538_RS10195	PWY-381	nitrate reduction II (assimilatory)
AL538_RS10195	PWY-5675	nitrate reduction V (assimilatory)
AL538_RS10195	PWY-6549	L-glutamine biosynthesis III
AL538_RS10195	PWY-6963	ammonia assimilation cycle I
AL538_RS10195	PWY-6964	ammonia assimilation cycle II
AL538_RS10235	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AL538_RS10235	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AL538_RS10330	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AL538_RS10395	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AL538_RS10495	PWY-5686	UMP biosynthesis
AL538_RS10575	PWY-7039	phosphatidate metabolism, as a signaling molecule
AL538_RS10580	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
AL538_RS10580	PWY-7676	Kdo8N transfer to lipid IV<sub>A</sub>
AL538_RS10585	PWY-3221	dTDP-L-rhamnose biosynthesis II
AL538_RS10585	PWY-6808	dTDP-D-forosamine biosynthesis
AL538_RS10585	PWY-6942	dTDP-D-desosamine biosynthesis
AL538_RS10585	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AL538_RS10585	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
AL538_RS10585	PWY-6974	dTDP-L-olivose biosynthesis
AL538_RS10585	PWY-6976	dTDP-L-mycarose biosynthesis
AL538_RS10585	PWY-7104	dTDP-L-megosamine biosynthesis
AL538_RS10585	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
AL538_RS10585	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
AL538_RS10585	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AL538_RS10585	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
AL538_RS10585	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
AL538_RS10585	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
AL538_RS10585	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
AL538_RS10585	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
AL538_RS10585	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
AL538_RS10585	PWY-7688	AL538_RS10585
AL538_RS10590	PWY-3221	dTDP-L-rhamnose biosynthesis II
AL538_RS10590	PWY-6808	dTDP-D-forosamine biosynthesis
AL538_RS10590	PWY-6942	dTDP-D-desosamine biosynthesis
AL538_RS10590	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AL538_RS10590	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
AL538_RS10590	PWY-6974	dTDP-L-olivose biosynthesis
AL538_RS10590	PWY-6976	dTDP-L-mycarose biosynthesis
AL538_RS10590	PWY-7104	dTDP-L-megosamine biosynthesis
AL538_RS10590	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
AL538_RS10590	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
AL538_RS10590	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AL538_RS10590	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
AL538_RS10590	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
AL538_RS10590	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
AL538_RS10590	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
AL538_RS10590	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
AL538_RS10590	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
AL538_RS10590	PWY-7688	AL538_RS10590
AL538_RS10595	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AL538_RS10595	PWY-7688	AL538_RS10595
AL538_RS10620	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
AL538_RS10680	PWY-6349	CDP-archaeol biosynthesis
AL538_RS10680	PWY-7294	xylose degradation IV
AL538_RS10680	PWY-7295	L-arabinose degradation IV
AL538_RS10735	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
AL538_RS10745	PWY-1042	glycolysis IV (plant cytosol)
AL538_RS10745	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL538_RS10745	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL538_RS10745	PWY-7003	glycerol degradation to butanol
AL538_RS10770	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL538_RS10785	PWY-5839	menaquinol-7 biosynthesis
AL538_RS10785	PWY-5851	demethylmenaquinol-9 biosynthesis
AL538_RS10785	PWY-5852	demethylmenaquinol-8 biosynthesis I
AL538_RS10785	PWY-5853	demethylmenaquinol-6 biosynthesis I
AL538_RS10785	PWY-5890	menaquinol-10 biosynthesis
AL538_RS10785	PWY-5891	menaquinol-11 biosynthesis
AL538_RS10785	PWY-5892	menaquinol-12 biosynthesis
AL538_RS10785	PWY-5895	menaquinol-13 biosynthesis
AL538_RS11000	PWY-5194	siroheme biosynthesis
AL538_RS11000	PWY-5441	S-methyl-L-methionine cycle
AL538_RS11000	PWY-702	L-methionine biosynthesis II
AL538_RS11000	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AL538_RS11005	PWY-5278	sulfite oxidation III
AL538_RS11005	PWY-5340	sulfate activation for sulfonation
AL538_RS11005	PWY-6683	sulfate reduction III (assimilatory)
AL538_RS11005	PWY-6932	selenate reduction
AL538_RS11010	PWY-5278	sulfite oxidation III
AL538_RS11010	PWY-5340	sulfate activation for sulfonation
AL538_RS11010	PWY-6683	sulfate reduction III (assimilatory)
AL538_RS11010	PWY-6932	selenate reduction
AL538_RS11020	PWY-5340	sulfate activation for sulfonation
AL538_RS11090	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL538_RS11140	PWY-1622	formaldehyde assimilation I (serine pathway)
AL538_RS11140	PWY-5392	reductive TCA cycle II
AL538_RS11140	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AL538_RS11140	PWY-5690	TCA cycle II (plants and fungi)
AL538_RS11140	PWY-5913	TCA cycle VI (obligate autotrophs)
AL538_RS11140	PWY-6728	methylaspartate cycle
AL538_RS11140	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL538_RS11140	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AL538_RS11140	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AL538_RS11180	PWY-3841	folate transformations II
AL538_RS11180	PWY-6614	tetrahydrofolate biosynthesis
AL538_RS11200	PWY-7294	xylose degradation IV
AL538_RS11200	PWY-7295	L-arabinose degradation IV
AL538_RS11235	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AL538_RS11240	PWY-6871	3-methylbutanol biosynthesis
AL538_RS11270	PWY-5101	L-isoleucine biosynthesis II
AL538_RS11270	PWY-5103	L-isoleucine biosynthesis III
AL538_RS11270	PWY-5104	L-isoleucine biosynthesis IV
AL538_RS11270	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AL538_RS11270	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AL538_RS11270	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AL538_RS11270	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AL538_RS11275	PWY-5101	L-isoleucine biosynthesis II
AL538_RS11275	PWY-5103	L-isoleucine biosynthesis III
AL538_RS11275	PWY-5104	L-isoleucine biosynthesis IV
AL538_RS11275	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AL538_RS11275	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AL538_RS11275	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AL538_RS11275	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AL538_RS11290	PWY-1042	glycolysis IV (plant cytosol)
AL538_RS11290	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AL538_RS11290	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL538_RS11290	PWY-5723	Rubisco shunt
AL538_RS11290	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL538_RS11290	PWY-6886	1-butanol autotrophic biosynthesis
AL538_RS11290	PWY-6901	superpathway of glucose and xylose degradation
AL538_RS11290	PWY-7003	glycerol degradation to butanol
AL538_RS11290	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AL538_RS11290	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AL538_RS11300	PWY-6749	CMP-legionaminate biosynthesis I
AL538_RS11335	PWY-6531	mannitol cycle
AL538_RS11390	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
AL538_RS11390	PWY-5368	dimorphecolate biosynthesis
AL538_RS11390	PWY-5995	linoleate biosynthesis I (plants)
AL538_RS11390	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
AL538_RS11390	PWY-6803	phosphatidylcholine acyl editing
AL538_RS11390	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
AL538_RS11390	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AL538_RS11390	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AL538_RS11390	PWY-7470	phosphatidylcholine biosynthesis VII
AL538_RS11390	PWY-7618	ricinoleate biosynthesis
AL538_RS11405	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AL538_RS11405	PWY-6148	tetrahydromethanopterin biosynthesis
AL538_RS11405	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AL538_RS11405	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AL538_RS11410	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AL538_RS11410	PWY-6148	tetrahydromethanopterin biosynthesis
AL538_RS11410	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AL538_RS11410	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AL538_RS11415	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
AL538_RS11545	PWY-3781	aerobic respiration I (cytochrome c)
AL538_RS11545	PWY-6692	Fe(II) oxidation
AL538_RS11545	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
AL538_RS11545	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AL538_RS11575	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
AL538_RS11590	PWY-2201	folate transformations I
AL538_RS11600	PWY-2201	folate transformations I
AL538_RS11620	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AL538_RS11620	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AL538_RS11625	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AL538_RS11625	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AL538_RS11625	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AL538_RS11630	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AL538_RS11630	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AL538_RS11640	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AL538_RS11640	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AL538_RS11640	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AL538_RS11640	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AL538_RS11645	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AL538_RS11645	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AL538_RS11665	PWY-2201	folate transformations I
AL538_RS11665	PWY-5497	purine nucleobases degradation II (anaerobic)
AL538_RS11675	PWY-6502	oxidized GTP and dGTP detoxification
AL538_RS11680	PWY-2941	L-lysine biosynthesis II
AL538_RS11680	PWY-2942	L-lysine biosynthesis III
AL538_RS11680	PWY-5097	L-lysine biosynthesis VI
AL538_RS11685	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL538_RS11685	PWY-5686	UMP biosynthesis
AL538_RS11685	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL538_RS11690	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL538_RS11690	PWY-5686	UMP biosynthesis
AL538_RS11690	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL538_RS11735	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AL538_RS11735	PWY-6153	autoinducer AI-2 biosynthesis I
AL538_RS11735	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
AL538_RS11810	PWY-2941	L-lysine biosynthesis II
AL538_RS11810	PWY-2942	L-lysine biosynthesis III
AL538_RS11810	PWY-5097	L-lysine biosynthesis VI
AL538_RS11810	PWY-6559	spermidine biosynthesis II
AL538_RS11810	PWY-6562	norspermidine biosynthesis
AL538_RS11810	PWY-7153	grixazone biosynthesis
AL538_RS11815	PWY-702	L-methionine biosynthesis II
AL538_RS11960	PWY-3841	folate transformations II
AL538_RS11960	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AL538_RS11960	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL538_RS11960	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AL538_RS11960	PWY-7199	pyrimidine deoxyribonucleosides salvage
AL538_RS11960	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AL538_RS11990	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
AL538_RS11990	PWY-6167	flavin biosynthesis II (archaea)
AL538_RS11990	PWY-6168	flavin biosynthesis III (fungi)
AL538_RS12050	PWY-6902	chitin degradation II
AL538_RS12055	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AL538_RS12055	PWY-6164	3-dehydroquinate biosynthesis I
AL538_RS12055	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AL538_RS12060	PWY-3461	L-tyrosine biosynthesis II
AL538_RS12060	PWY-3462	L-phenylalanine biosynthesis II
AL538_RS12060	PWY-6120	L-tyrosine biosynthesis III
AL538_RS12060	PWY-6627	salinosporamide A biosynthesis
AL538_RS12060	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
AL538_RS12060	PWY-7626	bacilysin biosynthesis
AL538_RS12095	PWY-3461	L-tyrosine biosynthesis II
AL538_RS12095	PWY-3462	L-phenylalanine biosynthesis II
AL538_RS12095	PWY-6120	L-tyrosine biosynthesis III
AL538_RS12095	PWY-6627	salinosporamide A biosynthesis
AL538_RS12095	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
AL538_RS12095	PWY-7626	bacilysin biosynthesis
AL538_RS12275	PWY-6728	methylaspartate cycle
AL538_RS12275	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL538_RS12275	PWY-7118	chitin degradation to ethanol
AL538_RS12275	PWY-7294	xylose degradation IV
AL538_RS12275	PWY-7295	L-arabinose degradation IV
AL538_RS12280	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL538_RS12300	PWY-6700	queuosine biosynthesis
AL538_RS12305	PWY-6700	queuosine biosynthesis
AL538_RS12335	PWY-2301	<i>myo</i>-inositol biosynthesis
AL538_RS12335	PWY-4702	phytate degradation I
AL538_RS12335	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
AL538_RS12340	PWY-6004	glycine betaine biosynthesis V (from glycine)
AL538_RS12350	PWY-6823	molybdenum cofactor biosynthesis
AL538_RS12350	PWY-6891	thiazole biosynthesis II (Bacillus)
AL538_RS12350	PWY-6892	thiazole biosynthesis I (E. coli)
AL538_RS12350	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AL538_RS12390	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AL538_RS12390	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AL538_RS12390	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AL538_RS12390	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL538_RS12390	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AL538_RS12390	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AL538_RS12390	PWY-7205	CMP phosphorylation
AL538_RS12390	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AL538_RS12390	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL538_RS12390	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AL538_RS12390	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL538_RS12390	PWY-7224	purine deoxyribonucleosides salvage
AL538_RS12390	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AL538_RS12390	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AL538_RS12395	PWY-2201	folate transformations I
AL538_RS12445	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AL538_RS12445	PWY-6596	adenosine nucleotides degradation I
AL538_RS12445	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AL538_RS12450	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AL538_RS12460	PWY-6902	chitin degradation II
AL538_RS12495	PWY-5344	L-homocysteine biosynthesis
AL538_RS12495	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
AL538_RS12520	PWY-6823	molybdenum cofactor biosynthesis
AL538_RS12520	PWY-6891	thiazole biosynthesis II (Bacillus)
AL538_RS12520	PWY-6892	thiazole biosynthesis I (E. coli)
AL538_RS12520	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AL538_RS12715	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AL538_RS12715	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AL538_RS12715	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
AL538_RS12780	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AL538_RS12780	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AL538_RS12780	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AL538_RS12835	PWY-3341	L-proline biosynthesis III
AL538_RS12835	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AL538_RS12840	PWY-3341	L-proline biosynthesis III
AL538_RS12840	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AL538_RS12850	PWY-5525	D-glucuronate degradation I
AL538_RS12855	PWY-6167	flavin biosynthesis II (archaea)
AL538_RS12855	PWY-6168	flavin biosynthesis III (fungi)
AL538_RS12855	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AL538_RS12860	PWY-6167	flavin biosynthesis II (archaea)
AL538_RS12860	PWY-6168	flavin biosynthesis III (fungi)
AL538_RS12860	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AL538_RS12865	PWY-6167	flavin biosynthesis II (archaea)
AL538_RS12865	PWY-6168	flavin biosynthesis III (fungi)
AL538_RS12875	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AL538_RS12875	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AL538_RS12875	PWY-6896	thiamin salvage I
AL538_RS12875	PWY-6897	thiamin salvage II
AL538_RS12880	PWY-5269	cardiolipin biosynthesis II
AL538_RS12880	PWY-5668	cardiolipin biosynthesis I
AL538_RS12885	PWY-6891	thiazole biosynthesis II (Bacillus)
AL538_RS12885	PWY-6892	thiazole biosynthesis I (E. coli)
AL538_RS12885	PWY-7560	methylerythritol phosphate pathway II
AL538_RS12960	PWY-6700	queuosine biosynthesis
AL538_RS13035	PWY-1622	formaldehyde assimilation I (serine pathway)
AL538_RS13035	PWY-181	photorespiration
AL538_RS13035	PWY-2161	folate polyglutamylation
AL538_RS13035	PWY-2201	folate transformations I
AL538_RS13035	PWY-3661	glycine betaine degradation I
AL538_RS13035	PWY-3661-1	glycine betaine degradation II (mammalian)
AL538_RS13035	PWY-3841	folate transformations II
AL538_RS13035	PWY-5497	purine nucleobases degradation II (anaerobic)
AL538_RS13040	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AL538_RS13040	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AL538_RS13045	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AL538_RS13045	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AL538_RS13055	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AL538_RS13055	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AL538_RS13075	PWY-6825	phosphatidylcholine biosynthesis V
AL538_RS13245	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
AL538_RS13255	PWY-7560	methylerythritol phosphate pathway II
AL538_RS13265	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AL538_RS13290	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AL538_RS13290	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AL538_RS13335	PWY-6902	chitin degradation II
AL538_RS13365	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AL538_RS13520	PWY-6936	seleno-amino acid biosynthesis
AL538_RS13630	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AL538_RS13665	PWY-6906	chitin derivatives degradation
AL538_RS13665	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
AL538_RS13665	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
AL538_RS13675	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AL538_RS13715	PWY-2723	trehalose degradation V
AL538_RS13715	PWY-3801	sucrose degradation II (sucrose synthase)
AL538_RS13715	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
AL538_RS13715	PWY-5661	GDP-glucose biosynthesis
AL538_RS13715	PWY-5940	streptomycin biosynthesis
AL538_RS13715	PWY-5941	glycogen degradation II (eukaryotic)
AL538_RS13715	PWY-622	starch biosynthesis
AL538_RS13715	PWY-6731	starch degradation III
AL538_RS13715	PWY-6737	starch degradation V
AL538_RS13715	PWY-6749	CMP-legionaminate biosynthesis I
AL538_RS13715	PWY-7238	sucrose biosynthesis II
AL538_RS13715	PWY-7343	UDP-glucose biosynthesis
AL538_RS13750	PWY-3781	aerobic respiration I (cytochrome c)
AL538_RS13750	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AL538_RS13750	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AL538_RS13750	PWY-5690	TCA cycle II (plants and fungi)
AL538_RS13750	PWY-6728	methylaspartate cycle
AL538_RS13750	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL538_RS13750	PWY-7254	TCA cycle VII (acetate-producers)
AL538_RS13750	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AL538_RS13755	PWY-3781	aerobic respiration I (cytochrome c)
AL538_RS13755	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AL538_RS13755	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AL538_RS13755	PWY-5690	TCA cycle II (plants and fungi)
AL538_RS13755	PWY-6728	methylaspartate cycle
AL538_RS13755	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL538_RS13755	PWY-7254	TCA cycle VII (acetate-producers)
AL538_RS13755	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AL538_RS13760	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AL538_RS13765	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AL538_RS13770	PWY-5392	reductive TCA cycle II
AL538_RS13770	PWY-5537	pyruvate fermentation to acetate V
AL538_RS13770	PWY-5538	pyruvate fermentation to acetate VI
AL538_RS13770	PWY-5690	TCA cycle II (plants and fungi)
AL538_RS13770	PWY-5913	TCA cycle VI (obligate autotrophs)
AL538_RS13770	PWY-6728	methylaspartate cycle
AL538_RS13770	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL538_RS13770	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AL538_RS13775	PWY-5392	reductive TCA cycle II
AL538_RS13775	PWY-5537	pyruvate fermentation to acetate V
AL538_RS13775	PWY-5538	pyruvate fermentation to acetate VI
AL538_RS13775	PWY-5690	TCA cycle II (plants and fungi)
AL538_RS13775	PWY-5913	TCA cycle VI (obligate autotrophs)
AL538_RS13775	PWY-6728	methylaspartate cycle
AL538_RS13775	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL538_RS13775	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AL538_RS13835	PWY-2201	folate transformations I
AL538_RS13835	PWY-5497	purine nucleobases degradation II (anaerobic)
AL538_RS13845	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
AL538_RS13845	PWY-5368	dimorphecolate biosynthesis
AL538_RS13845	PWY-5995	linoleate biosynthesis I (plants)
AL538_RS13845	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
AL538_RS13845	PWY-6803	phosphatidylcholine acyl editing
AL538_RS13845	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
AL538_RS13845	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AL538_RS13845	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AL538_RS13845	PWY-7470	phosphatidylcholine biosynthesis VII
AL538_RS13845	PWY-7618	ricinoleate biosynthesis
AL538_RS13920	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
AL538_RS13920	PWY-2201	folate transformations I
AL538_RS13920	PWY-3841	folate transformations II
AL538_RS13920	PWY-5030	L-histidine degradation III
AL538_RS13920	PWY-5497	purine nucleobases degradation II (anaerobic)
AL538_RS13920	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AL538_RS14035	PWY-5367	petroselinate biosynthesis
AL538_RS14035	PWY-5515	L-arabinose degradation II
AL538_RS14035	PWY-5525	D-glucuronate degradation I
AL538_RS14035	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AL538_RS14035	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AL538_RS14035	PWY-5989	stearate biosynthesis II (bacteria and plants)
AL538_RS14035	PWY-5994	palmitate biosynthesis I (animals and fungi)
AL538_RS14035	PWY-6113	superpathway of mycolate biosynthesis
AL538_RS14035	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AL538_RS14035	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AL538_RS14035	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AL538_RS14035	PWY-7663	gondoate biosynthesis (anaerobic)
AL538_RS14035	PWY-7664	oleate biosynthesis IV (anaerobic)
AL538_RS14035	PWYG-321	mycolate biosynthesis
AL538_RS14140	PWY-5901	2,3-dihydroxybenzoate biosynthesis
AL538_RS14150	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AL538_RS14150	PWY-5901	2,3-dihydroxybenzoate biosynthesis
AL538_RS14150	PWY-6406	salicylate biosynthesis I
AL538_RS14160	PWY-5901	2,3-dihydroxybenzoate biosynthesis
AL538_RS14175	PWY-6012	acyl carrier protein metabolism I
AL538_RS14175	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AL538_RS14305	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AL538_RS14305	PWY-5901	2,3-dihydroxybenzoate biosynthesis
AL538_RS14305	PWY-6406	salicylate biosynthesis I
AL538_RS14310	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AL538_RS14315	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AL538_RS14320	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AL538_RS14325	PWY-1042	glycolysis IV (plant cytosol)
AL538_RS14325	PWY-1622	formaldehyde assimilation I (serine pathway)
AL538_RS14325	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AL538_RS14325	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL538_RS14325	PWY-5723	Rubisco shunt
AL538_RS14325	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AL538_RS14325	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL538_RS14325	PWY-6886	1-butanol autotrophic biosynthesis
AL538_RS14325	PWY-6901	superpathway of glucose and xylose degradation
AL538_RS14325	PWY-7003	glycerol degradation to butanol
AL538_RS14325	PWY-7124	ethylene biosynthesis V (engineered)
AL538_RS14325	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AL538_RS14330	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AL538_RS14510	PWY-4202	arsenate detoxification I (glutaredoxin)
AL538_RS14510	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AL538_RS14510	PWY-6608	guanosine nucleotides degradation III
AL538_RS14510	PWY-6609	adenine and adenosine salvage III
AL538_RS14510	PWY-6611	adenine and adenosine salvage V
AL538_RS14510	PWY-6620	guanine and guanosine salvage
AL538_RS14510	PWY-6627	salinosporamide A biosynthesis
AL538_RS14510	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
AL538_RS14510	PWY-7179	purine deoxyribonucleosides degradation I
AL538_RS14510	PWY-7179-1	purine deoxyribonucleosides degradation
AL538_RS14545	PWY-6896	thiamin salvage I
AL538_RS14620	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AL538_RS14660	PWY-5480	pyruvate fermentation to ethanol I
AL538_RS14660	PWY-5485	pyruvate fermentation to acetate IV
AL538_RS14660	PWY-5493	reductive monocarboxylic acid cycle
AL538_RS14740	PWY-5913	TCA cycle VI (obligate autotrophs)
AL538_RS14740	PWY-6549	L-glutamine biosynthesis III
AL538_RS14740	PWY-6728	methylaspartate cycle
AL538_RS14740	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL538_RS14740	PWY-7124	ethylene biosynthesis V (engineered)
AL538_RS14740	PWY-7254	TCA cycle VII (acetate-producers)
AL538_RS14740	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AL538_RS14780	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AL538_RS14795	PWY-622	starch biosynthesis
AL538_RS14800	PWY-622	starch biosynthesis
AL538_RS14930	PWY-7545	pyruvate to cytochrome <i>bd</i> terminal oxidase electron transfer
AL538_RS15005	PWY-5480	pyruvate fermentation to ethanol I
AL538_RS15005	PWY-5485	pyruvate fermentation to acetate IV
AL538_RS15005	PWY-5493	reductive monocarboxylic acid cycle
AL538_RS15020	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AL538_RS15020	PWY-5723	Rubisco shunt
AL538_RS15045	PWY-3861	mannitol degradation II
AL538_RS15045	PWY-3881	mannitol biosynthesis
AL538_RS15045	PWY-5659	GDP-mannose biosynthesis
AL538_RS15045	PWY-6992	1,5-anhydrofructose degradation
AL538_RS15045	PWY-7456	mannan degradation
AL538_RS15045	PWY-7586	&beta;-1,4-D-mannosyl-<i>N</i>-acetyl-D-glucosamine degradation
AL538_RS15045	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
AL538_RS15050	PWY-5316	nicotine biosynthesis
AL538_RS15050	PWY-7342	superpathway of nicotine biosynthesis
AL538_RS15240	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AL538_RS15495	PWY-6986	alginate degradation
AL538_RS15535	PWY-6986	alginate degradation
AL538_RS15535	PWY-7651	heparan sulfate degradation
AL538_RS15540	PWY-6986	alginate degradation
AL538_RS15540	PWY-7651	heparan sulfate degradation
AL538_RS15555	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AL538_RS15555	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AL538_RS15555	PWY-7242	D-fructuronate degradation
AL538_RS15555	PWY-7310	D-glucosaminate degradation
AL538_RS15555	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
AL538_RS15575	PWY-5506	methanol oxidation to formaldehyde IV
AL538_RS15670	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
AL538_RS15695	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AL538_RS15700	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AL538_RS15700	PWY-6578	8-amino-7-oxononanoate biosynthesis III
AL538_RS15700	PWY-7147	8-amino-7-oxononanoate biosynthesis II
AL538_RS15705	PWY-2201	folate transformations I
AL538_RS15705	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AL538_RS15710	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AL538_RS15760	PWY-6123	inosine-5'-phosphate biosynthesis I
AL538_RS15760	PWY-6124	inosine-5'-phosphate biosynthesis II
AL538_RS15760	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AL538_RS15760	PWY-7234	inosine-5'-phosphate biosynthesis III
AL538_RS15865	PWY-7199	pyrimidine deoxyribonucleosides salvage
AL538_RS15920	PWY-6527	stachyose degradation
AL538_RS16030	PWY-6936	seleno-amino acid biosynthesis
AL538_RS16110	PWY-5350	thiosulfate disproportionation III (rhodanese)
AL538_RS16220	PWY-6527	stachyose degradation
AL538_RS16270	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AL538_RS16270	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AL538_RS16270	PWY-5989	stearate biosynthesis II (bacteria and plants)
AL538_RS16270	PWY-6113	superpathway of mycolate biosynthesis
AL538_RS16270	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AL538_RS16270	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AL538_RS16270	PWY-7663	gondoate biosynthesis (anaerobic)
AL538_RS16270	PWY-7664	oleate biosynthesis IV (anaerobic)
AL538_RS16270	PWYG-321	mycolate biosynthesis
AL538_RS16895	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AL538_RS17020	PWY-5747	2-methylcitrate cycle II
AL538_RS17040	PWY-6672	<i>cis</i>-genanyl-CoA degradation
AL538_RS17040	PWY-7118	chitin degradation to ethanol
AL538_RS17065	PWY-6703	preQ<sub>0</sub> biosynthesis
AL538_RS17070	PWY-6703	preQ<sub>0</sub> biosynthesis
AL538_RS17920	PWY-6825	phosphatidylcholine biosynthesis V
AL538_RS20325	PWY-5958	acridone alkaloid biosynthesis
AL538_RS20325	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AL538_RS20325	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AL538_RS20375	PWY-6157	autoinducer AI-1 biosynthesis
AL538_RS21675	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AL538_RS21675	PWY-5491	diethylphosphate degradation
AL538_RS21745	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AL538_RS21745	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AL538_RS21745	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AL538_RS21745	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AL538_RS22230	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AL538_RS22230	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AL538_RS22230	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AL538_RS23645	PWY-6891	thiazole biosynthesis II (Bacillus)
AL538_RS23645	PWY-6892	thiazole biosynthesis I (E. coli)
AL538_RS23645	PWY-7560	methylerythritol phosphate pathway II
AL538_RS23920	PWY-4981	L-proline biosynthesis II (from arginine)
AL538_RS23920	PWY-4984	urea cycle
AL538_RS23920	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL538_RS24320	PWY-3801	sucrose degradation II (sucrose synthase)
AL538_RS24320	PWY-5054	sorbitol biosynthesis I
AL538_RS24320	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
AL538_RS24320	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AL538_RS24320	PWY-5659	GDP-mannose biosynthesis
AL538_RS24320	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL538_RS24320	PWY-621	sucrose degradation III (sucrose invertase)
AL538_RS24320	PWY-622	starch biosynthesis
AL538_RS24320	PWY-6981	chitin biosynthesis
AL538_RS24320	PWY-6992	1,5-anhydrofructose degradation
AL538_RS24320	PWY-7238	sucrose biosynthesis II
AL538_RS24320	PWY-7347	sucrose biosynthesis III
AL538_RS24320	PWY-7385	1,3-propanediol biosynthesis (engineered)
AL538_RS24465	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL538_RS24465	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL538_RS25310	PWY-5269	cardiolipin biosynthesis II
AL538_RS25310	PWY-5668	cardiolipin biosynthesis I
AL538_RS26175	PWY-1361	benzoyl-CoA degradation I (aerobic)
AL538_RS26175	PWY-5109	2-methylbutanoate biosynthesis
AL538_RS26175	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AL538_RS26175	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AL538_RS26175	PWY-5177	glutaryl-CoA degradation
AL538_RS26175	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AL538_RS26175	PWY-6435	4-hydroxybenzoate biosynthesis V
AL538_RS26175	PWY-6583	pyruvate fermentation to butanol I
AL538_RS26175	PWY-6863	pyruvate fermentation to hexanol
AL538_RS26175	PWY-6883	pyruvate fermentation to butanol II
AL538_RS26175	PWY-6944	androstenedione degradation
AL538_RS26175	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AL538_RS26175	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AL538_RS26175	PWY-7007	methyl ketone biosynthesis
AL538_RS26175	PWY-7046	4-coumarate degradation (anaerobic)
AL538_RS26175	PWY-7094	fatty acid salvage
AL538_RS26175	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AL538_RS26175	PWY-735	jasmonic acid biosynthesis
AL538_RS26175	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AL538_RS26175	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AL538_RS26175	PWY-7726	AL538_RS26175
AL538_RS26625	PWY-381	nitrate reduction II (assimilatory)
AL538_RS26625	PWY-5675	nitrate reduction V (assimilatory)
AL538_RS26625	PWY-6549	L-glutamine biosynthesis III
AL538_RS26625	PWY-6963	ammonia assimilation cycle I
AL538_RS26625	PWY-6964	ammonia assimilation cycle II