locus-tag class description AL538_RS00010 PF00072 Response regulator receiver domain AL538_RS00010 PF00158 Sigma-54 interaction domain AL538_RS00010 PF02954 Bacterial regulatory protein, Fis family AL538_RS00025 PF02563 Polysaccharide biosynthesis/export protein AL538_RS00025 PF10531 SLBB domain AL538_RS00030 PF00691 OmpA family AL538_RS00035 PF01740 STAS domain AL538_RS00040 PF14743 DNA ligase OB-like domain AL538_RS00040 PF01068 ATP dependent DNA ligase domain AL538_RS00050 PF01554 MatE AL538_RS00055 PF00677 Lumazine binding domain AL538_RS00065 PF03881 Fructosamine kinase AL538_RS00070 PF01339 CheB methylesterase AL538_RS00070 PF00072 Response regulator receiver domain AL538_RS00075 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS00075 PF05230 MASE2 domain AL538_RS00085 PF00816 H-NS histone family AL538_RS00105 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AL538_RS00110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS00120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS00145 PF07434 CblD like pilus biogenesis initiator AL538_RS00165 PF00465 Iron-containing alcohol dehydrogenase AL538_RS00170 PF01116 Fructose-bisphosphate aldolase class-II AL538_RS00175 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AL538_RS00175 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AL538_RS00180 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AL538_RS00180 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AL538_RS00185 PF08240 Alcohol dehydrogenase GroES-like domain AL538_RS00185 PF00107 Zinc-binding dehydrogenase AL538_RS00195 PF00884 Sulfatase AL538_RS00195 PF16385 Domain of unknown function AL538_RS00200 PF04055 Radical SAM superfamily AL538_RS00200 PF13186 Iron-sulfur cluster-binding domain AL538_RS00205 PF17863 AAA lid domain AL538_RS00205 PF07726 ATPase family associated with various cellular activities (AAA) AL538_RS00220 PF00092 von Willebrand factor type A domain AL538_RS00235 PF00392 Bacterial regulatory proteins, gntR family AL538_RS00235 PF07702 UTRA domain AL538_RS00275 PF04002 RadC-like JAB domain AL538_RS00310 PF00270 DEAD/DEAH box helicase AL538_RS00310 PF18019 HD domain AL538_RS00310 PF00271 Helicase conserved C-terminal domain AL538_RS00330 PF09704 CRISPR-associated protein (Cas_Cas5) AL538_RS00335 PF08798 CRISPR associated protein AL538_RS00340 PF01867 CRISPR associated protein Cas1 AL538_RS00345 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) AL538_RS00400 PF00771 FHIPEP family AL538_RS00405 PF01312 FlhB HrpN YscU SpaS Family AL538_RS00435 PF00486 Transcriptional regulatory protein, C terminal AL538_RS00450 PF00813 FliP family AL538_RS00470 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AL538_RS00470 PF02874 ATP synthase alpha/beta family, beta-barrel domain AL538_RS00470 PF18269 T3SS EscN ATPase C-terminal domain AL538_RS00515 PF00877 NlpC/P60 family AL538_RS00520 PF12729 Four helix bundle sensory module for signal transduction AL538_RS00520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS00520 PF00672 HAMP domain AL538_RS00525 PF01609 Transposase DDE domain AL538_RS00525 PF13006 Insertion element 4 transposase N-terminal AL538_RS00565 PF03942 DTW domain AL538_RS00570 PF00480 ROK family AL538_RS00580 PF03453 MoeA N-terminal region (domain I and II) AL538_RS00580 PF00994 Probable molybdopterin binding domain AL538_RS00580 PF03454 MoeA C-terminal region (domain IV) AL538_RS00585 PF12804 MobA-like NTP transferase domain AL538_RS00590 PF08402 TOBE domain AL538_RS00590 PF00005 ABC transporter AL538_RS00595 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS00600 PF12849 PBP superfamily domain AL538_RS00605 PF00158 Sigma-54 interaction domain AL538_RS00605 PF02954 Bacterial regulatory protein, Fis family AL538_RS00605 PF00072 Response regulator receiver domain AL538_RS00610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS00610 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS00630 PF12848 ABC transporter AL538_RS00630 PF00005 ABC transporter AL538_RS00635 PF02634 FdhD/NarQ family AL538_RS00655 PF02613 Nitrate reductase delta subunit AL538_RS00665 PF01568 Molydopterin dinucleotide binding domain AL538_RS00665 PF00384 Molybdopterin oxidoreductase AL538_RS00665 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AL538_RS00670 PF13247 4Fe-4S dicluster domain AL538_RS00690 PF02146 Sir2 family AL538_RS00695 PF13416 Bacterial extracellular solute-binding protein AL538_RS00700 PF13416 Bacterial extracellular solute-binding protein AL538_RS00705 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS00710 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS00715 PF00005 ABC transporter AL538_RS00715 PF08402 TOBE domain AL538_RS00725 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AL538_RS00735 PF01171 PP-loop family AL538_RS00740 PF00582 Universal stress protein family AL538_RS00745 PF13545 Crp-like helix-turn-helix domain AL538_RS00745 PF00027 Cyclic nucleotide-binding domain AL538_RS00760 PF00403 Heavy-metal-associated domain AL538_RS00770 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AL538_RS00770 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AL538_RS00785 PF00115 Cytochrome C and Quinol oxidase polypeptide I AL538_RS00800 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS00800 PF09308 LuxQ, periplasmic AL538_RS00800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS00800 PF00072 Response regulator receiver domain AL538_RS00825 PF17414 MatP C-terminal ribbon-helix-helix domain AL538_RS00825 PF06303 MatP N-terminal domain AL538_RS00830 PF13654 AAA domain AL538_RS00830 PF05362 Lon protease (S16) C-terminal proteolytic domain AL538_RS00835 PF07977 FabA-like domain AL538_RS00840 PF04957 Ribosome modulation factor AL538_RS00850 PF12848 ABC transporter AL538_RS00850 PF16326 ABC transporter C-terminal domain AL538_RS00850 PF00005 ABC transporter AL538_RS00860 PF01170 Putative RNA methylase family UPF0020 AL538_RS00860 PF10672 S-adenosylmethionine-dependent methyltransferase AL538_RS00860 PF02926 THUMP domain AL538_RS00865 PF07126 Cell-division protein ZapC AL538_RS00870 PF01180 Dihydroorotate dehydrogenase AL538_RS00875 PF05088 Bacterial NAD-glutamate dehydrogenase AL538_RS00885 PF11940 Domain of unknown function (DUF3458) Ig-like fold AL538_RS00885 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AL538_RS00885 PF01433 Peptidase family M1 domain AL538_RS00895 PF17804 Tail specific protease N-terminal domain AL538_RS00895 PF00595 PDZ domain AL538_RS00895 PF03572 Peptidase family S41 AL538_RS00895 PF11818 C-terminal domain of tail specific protease (DUF3340) AL538_RS00900 PF04352 ProQ/FINO family AL538_RS00900 PF17516 ProQ C-terminal domain AL538_RS00905 PF13185 GAF domain AL538_RS00910 PF00005 ABC transporter AL538_RS00910 PF00664 ABC transporter transmembrane region AL538_RS00915 PF04403 Paraquat-inducible protein A AL538_RS00920 PF02470 MlaD protein AL538_RS00925 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF AL538_RS00925 PF01189 16S rRNA methyltransferase RsmB/F AL538_RS00925 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF AL538_RS00945 PF00793 DAHP synthetase I family AL538_RS00950 PF04461 Protein of unknown function (DUF520) AL538_RS00955 PF14824 Sirohaem biosynthesis protein central AL538_RS00955 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AL538_RS00955 PF10414 Sirohaem synthase dimerisation region AL538_RS00965 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL538_RS00970 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS00975 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS00980 PF00005 ABC transporter AL538_RS00985 PF01027 Inhibitor of apoptosis-promoting Bax1 AL538_RS00990 PF04358 DsrC like protein AL538_RS00995 PF00708 Acylphosphatase AL538_RS01000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS01000 PF00672 HAMP domain AL538_RS01000 PF02743 Cache domain AL538_RS01005 PF17785 PUA-like domain AL538_RS01005 PF10672 S-adenosylmethionine-dependent methyltransferase AL538_RS01030 PF05736 OprF membrane domain AL538_RS01030 PF00691 OmpA family AL538_RS01035 PF13188 PAS domain AL538_RS01035 PF03707 Bacterial signalling protein N terminal repeat AL538_RS01035 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS01035 PF00563 EAL domain AL538_RS01040 PF00672 HAMP domain AL538_RS01040 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AL538_RS01040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS01040 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS01040 PF01627 Hpt domain AL538_RS01040 PF00072 Response regulator receiver domain AL538_RS01055 PF00132 Bacterial transferase hexapeptide (six repeats) AL538_RS01055 PF12464 Maltose acetyltransferase AL538_RS01065 PF01928 CYTH domain AL538_RS01080 PF01047 MarR family AL538_RS01090 PF03729 Short repeat of unknown function (DUF308) AL538_RS01095 PF00924 Mechanosensitive ion channel AL538_RS01105 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family AL538_RS01115 PF05736 OprF membrane domain AL538_RS01115 PF00691 OmpA family AL538_RS01150 PF00437 Type II/IV secretion system protein AL538_RS01165 PF04972 BON domain AL538_RS01165 PF00263 Bacterial type II and III secretion system protein AL538_RS01165 PF13629 Pilus formation protein N terminal region AL538_RS01185 PF03466 LysR substrate binding domain AL538_RS01185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS01190 PF12833 Helix-turn-helix domain AL538_RS01200 PF04151 Bacterial pre-peptidase C-terminal domain AL538_RS01200 PF08453 Peptidase family M9 N-terminal AL538_RS01200 PF01752 Collagenase AL538_RS01210 PF00582 Universal stress protein family AL538_RS01215 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AL538_RS01215 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AL538_RS01220 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AL538_RS01225 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AL538_RS01225 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AL538_RS01230 PF12833 Helix-turn-helix domain AL538_RS01235 PF00593 TonB dependent receptor AL538_RS01235 PF07715 TonB-dependent Receptor Plug Domain AL538_RS01240 PF00072 Response regulator receiver domain AL538_RS01240 PF12431 Transcriptional regulator AL538_RS01245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS01245 PF00989 PAS fold AL538_RS01245 PF17203 Single cache domain 3 AL538_RS01245 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AL538_RS01260 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL538_RS01290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS01290 PF03466 LysR substrate binding domain AL538_RS01305 PF03264 NapC/NirT cytochrome c family, N-terminal region AL538_RS01320 PF02630 SCO1/SenC AL538_RS01325 PF08534 Redoxin AL538_RS01340 PF01794 Ferric reductase like transmembrane component AL538_RS01345 PF00174 Oxidoreductase molybdopterin binding domain AL538_RS01375 PF00392 Bacterial regulatory proteins, gntR family AL538_RS01375 PF07729 FCD domain AL538_RS01380 PF01810 LysE type translocator AL538_RS01390 PF05368 NmrA-like family AL538_RS01395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS01395 PF03466 LysR substrate binding domain AL538_RS01400 PF05922 Peptidase inhibitor I9 AL538_RS01400 PF00082 Subtilase family AL538_RS01400 PF04151 Bacterial pre-peptidase C-terminal domain AL538_RS01405 PF03150 Di-haem cytochrome c peroxidase AL538_RS01405 PF00034 Cytochrome c AL538_RS01415 PF00696 Amino acid kinase family AL538_RS01415 PF13840 ACT domain AL538_RS01420 PF06339 Ectoine synthase AL538_RS01425 PF00202 Aminotransferase class-III AL538_RS01430 PF00583 Acetyltransferase (GNAT) family AL538_RS01435 PF02028 BCCT, betaine/carnitine/choline family transporter AL538_RS01445 PF00571 CBS domain AL538_RS01450 PF01554 MatE AL538_RS01465 PF00884 Sulfatase AL538_RS01480 PF02311 AraC-like ligand binding domain AL538_RS01480 PF12833 Helix-turn-helix domain AL538_RS01500 PF01235 Sodium:alanine symporter family AL538_RS01505 PF00171 Aldehyde dehydrogenase family AL538_RS01510 PF00158 Sigma-54 interaction domain AL538_RS01510 PF01590 GAF domain AL538_RS01510 PF02954 Bacterial regulatory protein, Fis family AL538_RS01540 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AL538_RS01545 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase AL538_RS01550 PF04223 Citrate lyase, alpha subunit (CitF) AL538_RS01555 PF03328 HpcH/HpaI aldolase/citrate lyase family AL538_RS01560 PF06857 Malonate decarboxylase delta subunit (MdcD) AL538_RS01565 PF08218 Citrate lyase ligase C-terminal domain AL538_RS01570 PF03390 2-hydroxycarboxylate transporter family AL538_RS01575 PF04277 Oxaloacetate decarboxylase, gamma chain AL538_RS01580 PF00364 Biotin-requiring enzyme AL538_RS01580 PF02436 Conserved carboxylase domain AL538_RS01580 PF00682 HMGL-like AL538_RS01585 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit AL538_RS01590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS01590 PF17203 Single cache domain 3 AL538_RS01595 PF00072 Response regulator receiver domain AL538_RS01595 PF12431 Transcriptional regulator AL538_RS01620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL538_RS01635 PF00293 NUDIX domain AL538_RS01685 PF14497 Glutathione S-transferase, C-terminal domain AL538_RS01685 PF02798 Glutathione S-transferase, N-terminal domain AL538_RS01695 PF04209 homogentisate 1,2-dioxygenase AL538_RS01700 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL538_RS01710 PF01546 Peptidase family M20/M25/M40 AL538_RS01710 PF07687 Peptidase dimerisation domain AL538_RS01715 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL538_RS01720 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS01725 PF12911 N-terminal TM domain of oligopeptide transport permease C AL538_RS01725 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS01730 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL538_RS01730 PF00005 ABC transporter AL538_RS01735 PF00005 ABC transporter AL538_RS01735 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL538_RS01745 PF00041 Fibronectin type III domain AL538_RS01745 PF12561 ToxR activated gene A lipoprotein domain AL538_RS01750 PF08453 Peptidase family M9 N-terminal AL538_RS01750 PF01752 Collagenase AL538_RS01765 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS01765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS01770 PF00072 Response regulator receiver domain AL538_RS01770 PF00486 Transcriptional regulatory protein, C terminal AL538_RS01780 PF00873 AcrB/AcrD/AcrF family AL538_RS01785 PF00529 HlyD membrane-fusion protein of T1SS AL538_RS01785 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL538_RS01805 PF01048 Phosphorylase superfamily AL538_RS01810 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS01815 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS01820 PF08402 TOBE domain AL538_RS01820 PF00005 ABC transporter AL538_RS01825 PF00701 Dihydrodipicolinate synthetase family AL538_RS01830 PF02423 Ornithine cyclodeaminase/mu-crystallin family AL538_RS01840 PF01593 Flavin containing amine oxidoreductase AL538_RS01845 PF05544 Proline racemase AL538_RS01850 PF00171 Aldehyde dehydrogenase family AL538_RS01855 PF00392 Bacterial regulatory proteins, gntR family AL538_RS01865 PF00072 Response regulator receiver domain AL538_RS01865 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS01870 PF05971 RNA methyltransferase AL538_RS01875 PF01863 Protein of unknown function DUF45 AL538_RS01880 PF07963 Prokaryotic N-terminal methylation motif AL538_RS01890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL538_RS01905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS01905 PF03466 LysR substrate binding domain AL538_RS01910 PF07690 Major Facilitator Superfamily AL538_RS01960 PF00005 ABC transporter AL538_RS01965 PF01032 FecCD transport family AL538_RS01970 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AL538_RS01980 PF00300 Histidine phosphatase superfamily (branch 1) AL538_RS01985 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AL538_RS01990 PF02654 Cobalamin-5-phosphate synthase AL538_RS01995 PF02277 Phosphoribosyltransferase AL538_RS02000 PF01613 Flavin reductase like domain AL538_RS02005 PF13460 NAD(P)H-binding AL538_RS02010 PF00375 Sodium:dicarboxylate symporter family AL538_RS02020 PF08411 Exonuclease C-terminal AL538_RS02020 PF00929 Exonuclease AL538_RS02025 PF03788 LrgA family AL538_RS02030 PF04172 LrgB-like family AL538_RS02035 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AL538_RS02035 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region AL538_RS02040 PF02222 ATP-grasp domain AL538_RS02045 PF05724 Thiopurine S-methyltransferase (TPMT) AL538_RS02055 PF00216 Bacterial DNA-binding protein AL538_RS02095 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AL538_RS02095 PF01588 Putative tRNA binding domain AL538_RS02095 PF03484 tRNA synthetase B5 domain AL538_RS02095 PF03483 B3/4 domain AL538_RS02095 PF03147 Ferredoxin-fold anticodon binding domain AL538_RS02100 PF01409 tRNA synthetases class II core domain (F) AL538_RS02100 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AL538_RS02105 PF17158 Membrane-associated sensor, integral membrane domain AL538_RS02105 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS02140 PF01906 Putative heavy-metal-binding AL538_RS02145 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL538_RS02150 PF01042 Endoribonuclease L-PSP AL538_RS02155 PF00453 Ribosomal protein L20 AL538_RS02160 PF01632 Ribosomal protein L35 AL538_RS02165 PF00707 Translation initiation factor IF-3, C-terminal domain AL538_RS02165 PF05198 Translation initiation factor IF-3, N-terminal domain AL538_RS02170 PF02824 TGS domain AL538_RS02170 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AL538_RS02170 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AL538_RS02170 PF03129 Anticodon binding domain AL538_RS02185 PF07702 UTRA domain AL538_RS02185 PF00392 Bacterial regulatory proteins, gntR family AL538_RS02190 PF01979 Amidohydrolase family AL538_RS02195 PF00491 Arginase family AL538_RS02200 PF01175 Urocanase Rossmann-like domain AL538_RS02200 PF17392 Urocanase C-terminal domain AL538_RS02200 PF17391 Urocanase N-terminal domain AL538_RS02205 PF00221 Aromatic amino acid lyase AL538_RS02220 PF02913 FAD linked oxidases, C-terminal domain AL538_RS02220 PF01565 FAD binding domain AL538_RS02220 PF13183 4Fe-4S dicluster domain AL538_RS02235 PF00691 OmpA family AL538_RS02235 PF05736 OprF membrane domain AL538_RS02255 PF01259 SAICAR synthetase AL538_RS02295 PF00583 Acetyltransferase (GNAT) family AL538_RS02665 PF05016 ParE toxin of type II toxin-antitoxin system, parDE AL538_RS02710 PF01844 HNH endonuclease AL538_RS02740 PF00043 Glutathione S-transferase, C-terminal domain AL538_RS02740 PF02798 Glutathione S-transferase, N-terminal domain AL538_RS02760 PF13006 Insertion element 4 transposase N-terminal AL538_RS02760 PF01609 Transposase DDE domain AL538_RS02890 PF13344 Haloacid dehalogenase-like hydrolase AL538_RS02890 PF00293 NUDIX domain AL538_RS03055 PF03575 Peptidase family S51 AL538_RS03105 PF08378 Nuclease-related domain AL538_RS03230 PF04266 ASCH domain AL538_RS03415 PF14602 Hexapeptide repeat of succinyl-transferase AL538_RS03415 PF12464 Maltose acetyltransferase AL538_RS03425 PF00589 Phage integrase family AL538_RS03425 PF13495 Phage integrase, N-terminal SAM-like domain AL538_RS03440 PF13302 Acetyltransferase (GNAT) domain AL538_RS03445 PF00158 Sigma-54 interaction domain AL538_RS03445 PF18024 Helix-turn-helix domain AL538_RS03450 PF05128 Domain of unknown function (DUF697) AL538_RS03455 PF04317 YcjX-like family, DUF463 AL538_RS03470 PF00425 chorismate binding enzyme AL538_RS03470 PF04715 Anthranilate synthase component I, N terminal region AL538_RS03475 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS03475 PF09308 LuxQ, periplasmic AL538_RS03475 PF00072 Response regulator receiver domain AL538_RS03475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS03485 PF00293 NUDIX domain AL538_RS03490 PF03222 Tryptophan/tyrosine permease family AL538_RS03495 PF03313 Serine dehydratase alpha chain AL538_RS03495 PF03315 Serine dehydratase beta chain AL538_RS03500 PF00563 EAL domain AL538_RS03500 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS03500 PF03707 Bacterial signalling protein N terminal repeat AL538_RS03500 PF13188 PAS domain AL538_RS03510 PF00072 Response regulator receiver domain AL538_RS03510 PF00196 Bacterial regulatory proteins, luxR family AL538_RS03515 PF01242 6-pyruvoyl tetrahydropterin synthase AL538_RS03520 PF17200 Single Cache domain 2 AL538_RS03520 PF00672 HAMP domain AL538_RS03520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS03525 PF00152 tRNA synthetases class II (D, K and N) AL538_RS03525 PF01336 OB-fold nucleic acid binding domain AL538_RS03540 PF00392 Bacterial regulatory proteins, gntR family AL538_RS03540 PF00155 Aminotransferase class I and II AL538_RS03560 PF01966 HD domain AL538_RS03560 PF00672 HAMP domain AL538_RS03565 PF00155 Aminotransferase class I and II AL538_RS03585 PF00672 HAMP domain AL538_RS03585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS03590 PF02028 BCCT, betaine/carnitine/choline family transporter AL538_RS03595 PF01047 MarR family AL538_RS03600 PF00072 Response regulator receiver domain AL538_RS03600 PF00196 Bacterial regulatory proteins, luxR family AL538_RS03605 PF07730 Histidine kinase AL538_RS03605 PF17200 Single Cache domain 2 AL538_RS03610 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AL538_RS03620 PF03480 Bacterial extracellular solute-binding protein, family 7 AL538_RS03635 PF00753 Metallo-beta-lactamase superfamily AL538_RS03640 PF05951 Bacterial protein of unknown function (DUF882) AL538_RS03645 PF01471 Putative peptidoglycan binding domain AL538_RS03645 PF03734 L,D-transpeptidase catalytic domain AL538_RS03670 PF00925 GTP cyclohydrolase II AL538_RS03680 PF03918 Cytochrome C biogenesis protein AL538_RS03685 PF08534 Redoxin AL538_RS03690 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AL538_RS03690 PF01578 Cytochrome C assembly protein AL538_RS03695 PF03916 Polysulphide reductase, NrfD AL538_RS03700 PF13247 4Fe-4S dicluster domain AL538_RS03710 PF02335 Cytochrome c552 AL538_RS03725 PF03989 DNA gyrase C-terminal domain, beta-propeller AL538_RS03725 PF00521 DNA gyrase/topoisomerase IV, subunit A AL538_RS03740 PF00317 Ribonucleotide reductase, all-alpha domain AL538_RS03740 PF02867 Ribonucleotide reductase, barrel domain AL538_RS03740 PF03477 ATP cone domain AL538_RS03745 PF00268 Ribonucleotide reductase, small chain AL538_RS03755 PF00994 Probable molybdopterin binding domain AL538_RS03770 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AL538_RS03775 PF16653 Saccharopine dehydrogenase C-terminal domain AL538_RS03775 PF03435 Saccharopine dehydrogenase NADP binding domain AL538_RS03780 PF00202 Aminotransferase class-III AL538_RS03810 PF01066 CDP-alcohol phosphatidyltransferase AL538_RS03815 PF02151 UvrB/uvrC motif AL538_RS03815 PF08459 UvrC Helix-hairpin-helix N-terminal AL538_RS03815 PF01541 GIY-YIG catalytic domain AL538_RS03820 PF00072 Response regulator receiver domain AL538_RS03820 PF00196 Bacterial regulatory proteins, luxR family AL538_RS03825 PF03104 DNA polymerase family B, exonuclease domain AL538_RS03825 PF00136 DNA polymerase family B AL538_RS03835 PF08207 Elongation factor P (EF-P) KOW-like domain AL538_RS03835 PF01132 Elongation factor P (EF-P) OB domain AL538_RS03835 PF09285 Elongation factor P, C-terminal AL538_RS03840 PF04269 Protein of unknown function, DUF440 AL538_RS03845 PF00849 RNA pseudouridylate synthase AL538_RS03845 PF01479 S4 domain AL538_RS03855 PF01300 Telomere recombination AL538_RS03860 PF02811 PHP domain AL538_RS03865 PF08056 Tryptophan operon leader peptide AL538_RS03870 PF04715 Anthranilate synthase component I, N terminal region AL538_RS03870 PF00425 chorismate binding enzyme AL538_RS03875 PF00117 Glutamine amidotransferase class-I AL538_RS03880 PF00591 Glycosyl transferase family, a/b domain AL538_RS03880 PF02885 Glycosyl transferase family, helical bundle domain AL538_RS03885 PF00218 Indole-3-glycerol phosphate synthase AL538_RS03885 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AL538_RS03890 PF00291 Pyridoxal-phosphate dependent enzyme AL538_RS03895 PF00290 Tryptophan synthase alpha chain AL538_RS03900 PF00375 Sodium:dicarboxylate symporter family AL538_RS03905 PF17327 Acyl homoserine lactone synthase AL538_RS03910 PF00072 Response regulator receiver domain AL538_RS03910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS03920 PF04279 Intracellular septation protein A AL538_RS03925 PF03061 Thioesterase superfamily AL538_RS03930 PF03795 YCII-related domain AL538_RS03940 PF08267 Cobalamin-independent synthase, N-terminal domain AL538_RS03940 PF01717 Cobalamin-independent synthase, Catalytic domain AL538_RS03945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS03945 PF03466 LysR substrate binding domain AL538_RS03960 PF00563 EAL domain AL538_RS03960 PF00498 FHA domain AL538_RS03960 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS03965 PF11842 Domain of unknown function (DUF3362) AL538_RS03965 PF04055 Radical SAM superfamily AL538_RS03965 PF08497 Radical SAM N-terminal AL538_RS03970 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AL538_RS03970 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL538_RS03975 PF00375 Sodium:dicarboxylate symporter family AL538_RS03980 PF01042 Endoribonuclease L-PSP AL538_RS03985 PF13309 HTH domain AL538_RS03985 PF08348 YheO-like PAS domain AL538_RS03990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS03990 PF00672 HAMP domain AL538_RS04000 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AL538_RS04005 PF00535 Glycosyl transferase family 2 AL538_RS04010 PF00072 Response regulator receiver domain AL538_RS04010 PF00486 Transcriptional regulatory protein, C terminal AL538_RS04015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS04015 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS04015 PF00672 HAMP domain AL538_RS04035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS04035 PF03466 LysR substrate binding domain AL538_RS04040 PF00529 HlyD membrane-fusion protein of T1SS AL538_RS04040 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL538_RS04050 PF01047 MarR family AL538_RS04065 PF08267 Cobalamin-independent synthase, N-terminal domain AL538_RS04065 PF01717 Cobalamin-independent synthase, Catalytic domain AL538_RS04095 PF00005 ABC transporter AL538_RS04095 PF02687 FtsX-like permease family AL538_RS04095 PF12704 MacB-like periplasmic core domain AL538_RS04100 PF02687 FtsX-like permease family AL538_RS04100 PF00005 ABC transporter AL538_RS04100 PF12704 MacB-like periplasmic core domain AL538_RS04105 PF02687 FtsX-like permease family AL538_RS04105 PF12704 MacB-like periplasmic core domain AL538_RS04125 PF00440 Bacterial regulatory proteins, tetR family AL538_RS04130 PF00583 Acetyltransferase (GNAT) family AL538_RS04160 PF00085 Thioredoxin AL538_RS04165 PF02683 Cytochrome C biogenesis protein transmembrane region AL538_RS04165 PF11412 Disulphide bond corrector protein DsbC AL538_RS04175 PF03466 LysR substrate binding domain AL538_RS04175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS04180 PF04403 Paraquat-inducible protein A AL538_RS04185 PF02470 MlaD protein AL538_RS04190 PF03886 ABC-type transport auxiliary lipoprotein component AL538_RS04245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL538_RS04250 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AL538_RS04255 PF18073 Rubredoxin metal binding domain AL538_RS04260 PF06305 Lipopolysaccharide assembly protein A domain AL538_RS04265 PF00216 Bacterial DNA-binding protein AL538_RS04270 PF00575 S1 RNA binding domain AL538_RS04275 PF02224 Cytidylate kinase AL538_RS04280 PF01343 Peptidase family S49 AL538_RS04280 PF08496 Peptidase family S49 N-terminal AL538_RS04285 PF00106 short chain dehydrogenase AL538_RS04295 PF00873 AcrB/AcrD/AcrF family AL538_RS04320 PF01336 OB-fold nucleic acid binding domain AL538_RS04320 PF02811 PHP domain AL538_RS04320 PF14579 Helix-hairpin-helix motif AL538_RS04320 PF07733 Bacterial DNA polymerase III alpha NTPase domain AL538_RS04320 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AL538_RS04325 PF01584 CheW-like domain AL538_RS04325 PF00072 Response regulator receiver domain AL538_RS04330 PF00480 ROK family AL538_RS04335 PF00224 Pyruvate kinase, barrel domain AL538_RS04335 PF02887 Pyruvate kinase, alpha/beta domain AL538_RS04340 PF01734 Patatin-like phospholipase AL538_RS04355 PF00209 Sodium:neurotransmitter symporter family AL538_RS04370 PF02378 Phosphotransferase system, EIIC AL538_RS04370 PF00367 phosphotransferase system, EIIB AL538_RS04375 PF01026 TatD related DNase AL538_RS04380 PF09115 DNA polymerase III, delta subunit, C terminal AL538_RS04385 PF02223 Thymidylate kinase AL538_RS04390 PF02618 YceG-like family AL538_RS04395 PF01063 Amino-transferase class IV AL538_RS04400 PF02801 Beta-ketoacyl synthase, C-terminal domain AL538_RS04400 PF00109 Beta-ketoacyl synthase, N-terminal domain AL538_RS04405 PF00550 Phosphopantetheine attachment site AL538_RS04415 PF00698 Acyl transferase domain AL538_RS04420 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AL538_RS04420 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AL538_RS04425 PF02504 Fatty acid synthesis protein AL538_RS04430 PF01783 Ribosomal L32p protein family AL538_RS04435 PF02620 Large ribosomal RNA subunit accumulation protein YceD AL538_RS04440 PF02545 Maf-like protein AL538_RS04445 PF01479 S4 domain AL538_RS04445 PF00849 RNA pseudouridylate synthase AL538_RS04450 PF12111 Polyribonucleotide phosphorylase C terminal AL538_RS04450 PF10150 Ribonuclease E/G family AL538_RS04450 PF00575 S1 RNA binding domain AL538_RS04460 PF01740 STAS domain AL538_RS04460 PF00916 Sulfate permease family AL538_RS04465 PF01451 Low molecular weight phosphotyrosine protein phosphatase AL538_RS04470 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AL538_RS04470 PF12557 Cob(I)alamin adenosyltransferase N terminal AL538_RS04480 PF00485 Phosphoribulokinase / Uridine kinase family AL538_RS04485 PF10609 NUBPL iron-transfer P-loop NTPase AL538_RS04490 PF09334 tRNA synthetases class I (M) AL538_RS04490 PF01588 Putative tRNA binding domain AL538_RS04500 PF00392 Bacterial regulatory proteins, gntR family AL538_RS04500 PF07840 FadR C-terminal domain AL538_RS04505 PF06450 Bacterial Na+/H+ antiporter B (NhaB) AL538_RS04510 PF02600 Disulfide bond formation protein DsbB AL538_RS04515 PF07516 SecA Wing and Scaffold domain AL538_RS04515 PF01043 SecA preprotein cross-linking domain AL538_RS04515 PF02810 SEC-C motif AL538_RS04515 PF07517 SecA DEAD-like domain AL538_RS04520 PF01207 Dihydrouridine synthase (Dus) AL538_RS04525 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS04530 PF02903 Alpha amylase, N-terminal ig-like domain AL538_RS04530 PF00128 Alpha amylase, catalytic domain AL538_RS04535 PF00005 ABC transporter AL538_RS04540 PF02653 Branched-chain amino acid transport system / permease component AL538_RS04555 PF04217 Protein of unknown function, DUF412 AL538_RS04560 PF00871 Acetokinase family AL538_RS04565 PF07085 DRTGG domain AL538_RS04565 PF01515 Phosphate acetyl/butaryl transferase AL538_RS04570 PF13194 Domain of unknown function (DUF4010) AL538_RS04575 PF13409 Glutathione S-transferase, N-terminal domain AL538_RS04580 PF00005 ABC transporter AL538_RS04580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL538_RS04585 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL538_RS04585 PF00005 ABC transporter AL538_RS04590 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS04590 PF12911 N-terminal TM domain of oligopeptide transport permease C AL538_RS04595 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS04600 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL538_RS04605 PF02391 MoaE protein AL538_RS04610 PF02597 ThiS family AL538_RS04615 PF01967 MoaC family AL538_RS04620 PF00994 Probable molybdopterin binding domain AL538_RS04625 PF06463 Molybdenum Cofactor Synthesis C AL538_RS04625 PF04055 Radical SAM superfamily AL538_RS04630 PF01933 Uncharacterised protein family UPF0052 AL538_RS04635 PF01627 Hpt domain AL538_RS04640 PF00072 Response regulator receiver domain AL538_RS04640 PF00158 Sigma-54 interaction domain AL538_RS04640 PF02954 Bacterial regulatory protein, Fis family AL538_RS04645 PF04851 Type III restriction enzyme, res subunit AL538_RS04645 PF00271 Helicase conserved C-terminal domain AL538_RS04645 PF12344 Ultra-violet resistance protein B AL538_RS04645 PF02151 UvrB/uvrC motif AL538_RS04645 PF17757 UvrB interaction domain AL538_RS04655 PF01228 Glycine radical AL538_RS04655 PF02901 Pyruvate formate lyase-like AL538_RS04660 PF02508 Rnf-Nqr subunit, membrane protein AL538_RS04665 PF04060 Putative Fe-S cluster AL538_RS04670 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AL538_RS04670 PF12838 4Fe-4S dicluster domain AL538_RS04670 PF13375 RnfC Barrel sandwich hybrid domain AL538_RS04670 PF10531 SLBB domain AL538_RS04675 PF03116 NQR2, RnfD, RnfE family AL538_RS04680 PF04205 FMN-binding domain AL538_RS04685 PF02508 Rnf-Nqr subunit, membrane protein AL538_RS04690 PF00633 Helix-hairpin-helix motif AL538_RS04690 PF10576 Iron-sulfur binding domain of endonuclease III AL538_RS04690 PF00730 HhH-GPD superfamily base excision DNA repair protein AL538_RS04695 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL538_RS04700 PF10952 Protein of unknown function (DUF2753) AL538_RS04705 PF00691 OmpA family AL538_RS04705 PF18393 MotY N-terminal domain AL538_RS04710 PF00929 Exonuclease AL538_RS04715 PF03553 Na+/H+ antiporter family AL538_RS04715 PF13726 Na+-H+ antiporter family AL538_RS04750 PF03135 CagE, TrbE, VirB family, component of type IV transporter system AL538_RS04770 PF04335 VirB8 protein AL538_RS04775 PF03524 Conjugal transfer protein AL538_RS04780 PF03743 Bacterial conjugation TrbI-like protein AL538_RS04785 PF00437 Type II/IV secretion system protein AL538_RS04790 PF02534 Type IV secretory system Conjugative DNA transfer AL538_RS04800 PF01751 Toprim domain AL538_RS04800 PF01131 DNA topoisomerase AL538_RS04805 PF04463 Protein of unknown function (DUF523) AL538_RS04825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS04825 PF03466 LysR substrate binding domain AL538_RS04830 PF03466 LysR substrate binding domain AL538_RS04830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS04840 PF00005 ABC transporter AL538_RS04845 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS04850 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS04855 PF12849 PBP superfamily domain AL538_RS04880 PF03466 LysR substrate binding domain AL538_RS04880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS04885 PF03432 Relaxase/Mobilisation nuclease domain AL538_RS04885 PF18821 Large polyvalent protein-associated domain 7 AL538_RS04940 PF00183 Hsp90 protein AL538_RS04955 PF00905 Penicillin binding protein transpeptidase domain AL538_RS04955 PF14814 Bifunctional transglycosylase second domain AL538_RS04955 PF00912 Transglycosylase AL538_RS04965 PF04002 RadC-like JAB domain AL538_RS04990 PF00691 OmpA family AL538_RS04990 PF01389 OmpA-like transmembrane domain AL538_RS05050 PF00589 Phage integrase family AL538_RS05050 PF02899 Phage integrase, N-terminal SAM-like domain AL538_RS05055 PF00462 Glutaredoxin AL538_RS05060 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AL538_RS05060 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AL538_RS05075 PF00465 Iron-containing alcohol dehydrogenase AL538_RS05075 PF00171 Aldehyde dehydrogenase family AL538_RS05080 PF01914 MarC family integral membrane protein AL538_RS05085 PF00027 Cyclic nucleotide-binding domain AL538_RS05085 PF00520 Ion transport protein AL538_RS05090 PF01118 Semialdehyde dehydrogenase, NAD binding domain AL538_RS05090 PF02774 Semialdehyde dehydrogenase, dimerisation domain AL538_RS05095 PF03553 Na+/H+ antiporter family AL538_RS05110 PF04245 37-kD nucleoid-associated bacterial protein AL538_RS05115 PF07208 Protein of unknown function (DUF1414) AL538_RS05120 PF11893 Domain of unknown function (DUF3413) AL538_RS05120 PF00884 Sulfatase AL538_RS05130 PF00850 Histone deacetylase domain AL538_RS05135 PF00106 short chain dehydrogenase AL538_RS05145 PF01751 Toprim domain AL538_RS05145 PF01131 DNA topoisomerase AL538_RS05150 PF00881 Nitroreductase family AL538_RS05155 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AL538_RS05155 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL538_RS05160 PF01343 Peptidase family S49 AL538_RS05165 PF17763 Glutaminase/Asparaginase C-terminal domain AL538_RS05165 PF00710 Asparaginase, N-terminal AL538_RS05170 PF07023 Protein of unknown function (DUF1315) AL538_RS05180 PF01641 SelR domain AL538_RS05185 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AL538_RS05185 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AL538_RS05190 PF01263 Aldose 1-epimerase AL538_RS05195 PF01156 Inosine-uridine preferring nucleoside hydrolase AL538_RS05200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS05200 PF08447 PAS fold AL538_RS05200 PF13426 PAS domain AL538_RS05205 PF13847 Methyltransferase domain AL538_RS05220 PF02028 BCCT, betaine/carnitine/choline family transporter AL538_RS05225 PF00245 Alkaline phosphatase AL538_RS05235 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL538_RS05240 PF03992 Antibiotic biosynthesis monooxygenase AL538_RS05245 PF05552 Conserved TM helix AL538_RS05245 PF00924 Mechanosensitive ion channel AL538_RS05250 PF04226 Transglycosylase associated protein AL538_RS05260 PF03692 Putative zinc- or iron-chelating domain AL538_RS05265 PF03692 Putative zinc- or iron-chelating domain AL538_RS05270 PF13309 HTH domain AL538_RS05270 PF08348 YheO-like PAS domain AL538_RS05275 PF03313 Serine dehydratase alpha chain AL538_RS05280 PF01042 Endoribonuclease L-PSP AL538_RS05290 PF00230 Major intrinsic protein AL538_RS05295 PF13662 Toprim domain AL538_RS05295 PF02132 RecR protein AL538_RS05300 PF02575 YbaB/EbfC DNA-binding family AL538_RS05305 PF12169 DNA polymerase III subunits gamma and tau domain III AL538_RS05305 PF12170 DNA polymerase III tau subunit V interacting with alpha AL538_RS05310 PF00156 Phosphoribosyl transferase domain AL538_RS05315 PF04304 Protein of unknown function (DUF454) AL538_RS05325 PF00072 Response regulator receiver domain AL538_RS05330 PF03466 LysR substrate binding domain AL538_RS05330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS05335 PF00156 Phosphoribosyl transferase domain AL538_RS05340 PF02674 Colicin V production protein AL538_RS05345 PF05036 Sporulation related domain AL538_RS05350 PF08245 Mur ligase middle domain AL538_RS05350 PF02875 Mur ligase family, glutamate ligase domain AL538_RS05355 PF17848 Acetyl-coA carboxylase zinc finger domain AL538_RS05355 PF01039 Carboxyl transferase domain AL538_RS05365 PF01416 tRNA pseudouridine synthase AL538_RS05375 PF02774 Semialdehyde dehydrogenase, dimerisation domain AL538_RS05375 PF01118 Semialdehyde dehydrogenase, NAD binding domain AL538_RS05380 PF11890 Domain of unknown function (DUF3410) AL538_RS05380 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AL538_RS05380 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AL538_RS05390 PF02801 Beta-ketoacyl synthase, C-terminal domain AL538_RS05390 PF00109 Beta-ketoacyl synthase, N-terminal domain AL538_RS05395 PF01266 FAD dependent oxidoreductase AL538_RS05395 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AL538_RS05405 PF08891 YfcL protein AL538_RS05410 PF04315 Elongation factor P hydroxylase AL538_RS05415 PF03458 UPF0126 domain AL538_RS05420 PF01264 Chorismate synthase AL538_RS05425 PF05175 Methyltransferase small domain AL538_RS05430 PF01713 Smr domain AL538_RS05435 PF00300 Histidine phosphatase superfamily (branch 1) AL538_RS05440 PF00675 Insulinase (Peptidase family M16) AL538_RS05440 PF16187 Middle or third domain of peptidase_M16 AL538_RS05440 PF05193 Peptidase M16 inactive domain AL538_RS05445 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AL538_RS05445 PF00378 Enoyl-CoA hydratase/isomerase AL538_RS05445 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AL538_RS05450 PF02803 Thiolase, C-terminal domain AL538_RS05450 PF00108 Thiolase, N-terminal domain AL538_RS05455 PF08281 Sigma-70, region 4 AL538_RS05455 PF04542 Sigma-70 region 2 AL538_RS05465 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AL538_RS05470 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AL538_RS05475 PF04333 MlaA lipoprotein AL538_RS05480 PF03918 Cytochrome C biogenesis protein AL538_RS05485 PF03918 Cytochrome C biogenesis protein AL538_RS05490 PF08534 Redoxin AL538_RS05495 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AL538_RS05495 PF01578 Cytochrome C assembly protein AL538_RS05500 PF03100 CcmE AL538_RS05510 PF01578 Cytochrome C assembly protein AL538_RS05515 PF03379 CcmB protein AL538_RS05520 PF00005 ABC transporter AL538_RS05530 PF01584 CheW-like domain AL538_RS05540 PF13614 AAA domain AL538_RS05545 PF00072 Response regulator receiver domain AL538_RS05545 PF01339 CheB methylesterase AL538_RS05550 PF01627 Hpt domain AL538_RS05550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS05550 PF02895 Signal transducing histidine kinase, homodimeric domain AL538_RS05550 PF00072 Response regulator receiver domain AL538_RS05550 PF01584 CheW-like domain AL538_RS05555 PF04344 Chemotaxis phosphatase, CheZ AL538_RS05560 PF00072 Response regulator receiver domain AL538_RS05565 PF04545 Sigma-70, region 4 AL538_RS05565 PF04539 Sigma-70 region 3 AL538_RS05565 PF04542 Sigma-70 region 2 AL538_RS05570 PF10609 NUBPL iron-transfer P-loop NTPase AL538_RS05575 PF00448 SRP54-type protein, GTPase domain AL538_RS05580 PF00771 FHIPEP family AL538_RS05585 PF01312 FlhB HrpN YscU SpaS Family AL538_RS05590 PF01311 Bacterial export proteins, family 1 AL538_RS05595 PF01313 Bacterial export proteins, family 3 AL538_RS05600 PF00813 FliP family AL538_RS05605 PF04347 Flagellar biosynthesis protein, FliO AL538_RS05610 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AL538_RS05615 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AL538_RS05615 PF02154 Flagellar motor switch protein FliM AL538_RS05640 PF18269 T3SS EscN ATPase C-terminal domain AL538_RS05640 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AL538_RS05650 PF01706 FliG C-terminal domain AL538_RS05650 PF14841 FliG middle domain AL538_RS05650 PF14842 FliG N-terminal domain AL538_RS05655 PF08345 Flagellar M-ring protein C-terminal AL538_RS05655 PF01514 Secretory protein of YscJ/FliF family AL538_RS05660 PF02049 Flagellar hook-basal body complex protein FliE AL538_RS05665 PF00072 Response regulator receiver domain AL538_RS05665 PF00158 Sigma-54 interaction domain AL538_RS05665 PF02954 Bacterial regulatory protein, Fis family AL538_RS05670 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS05670 PF13188 PAS domain AL538_RS05670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS05675 PF06490 Flagellar regulatory protein FleQ AL538_RS05675 PF00158 Sigma-54 interaction domain AL538_RS05675 PF02954 Bacterial regulatory protein, Fis family AL538_RS05680 PF02561 Flagellar protein FliS AL538_RS05690 PF07195 Flagellar hook-associated protein 2 C-terminus AL538_RS05690 PF02465 Flagellar hook-associated protein 2 N-terminus AL538_RS05690 PF07196 Flagellin hook IN motif AL538_RS05695 PF03646 FlaG protein AL538_RS05700 PF00700 Bacterial flagellin C-terminal helical region AL538_RS05700 PF00669 Bacterial flagellin N-terminal helical region AL538_RS05700 PF07196 Flagellin hook IN motif AL538_RS05710 PF00669 Bacterial flagellin N-terminal helical region AL538_RS05710 PF07196 Flagellin hook IN motif AL538_RS05710 PF00700 Bacterial flagellin C-terminal helical region AL538_RS05720 PF00669 Bacterial flagellin N-terminal helical region AL538_RS05720 PF07196 Flagellin hook IN motif AL538_RS05720 PF00700 Bacterial flagellin C-terminal helical region AL538_RS05730 PF11975 Family 4 glycosyl hydrolase C-terminal domain AL538_RS05730 PF02056 Family 4 glycosyl hydrolase AL538_RS05735 PF12833 Helix-turn-helix domain AL538_RS05740 PF04261 Dyp-type peroxidase family AL538_RS05745 PF11143 Protein of unknown function (DUF2919) AL538_RS05765 PF03960 ArsC family AL538_RS05770 PF01546 Peptidase family M20/M25/M40 AL538_RS05770 PF07687 Peptidase dimerisation domain AL538_RS05785 PF06804 NlpB/DapX lipoprotein AL538_RS05790 PF00701 Dihydrodipicolinate synthetase family AL538_RS05795 PF01842 ACT domain AL538_RS05800 PF00578 AhpC/TSA family AL538_RS05805 PF01594 AI-2E family transporter AL538_RS05815 PF01435 Peptidase family M48 AL538_RS05815 PF13181 Tetratricopeptide repeat AL538_RS05820 PF03960 ArsC family AL538_RS05825 PF03358 NADPH-dependent FMN reductase AL538_RS05840 PF00860 Permease family AL538_RS05850 PF02769 AIR synthase related protein, C-terminal domain AL538_RS05850 PF00586 AIR synthase related protein, N-terminal domain AL538_RS05860 PF00551 Formyl transferase AL538_RS05865 PF13230 Glutamine amidotransferases class-II AL538_RS05870 PF13580 SIS domain AL538_RS05875 PF09317 Domain of unknown function (DUF1974) AL538_RS05875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL538_RS05875 PF02770 Acyl-CoA dehydrogenase, middle domain AL538_RS05875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL538_RS05895 PF00929 Exonuclease AL538_RS05900 PF00075 RNase H AL538_RS05905 PF08241 Methyltransferase domain AL538_RS05910 PF16123 Hydroxyacylglutathione hydrolase C-terminus AL538_RS05915 PF01464 Transglycosylase SLT domain AL538_RS05915 PF01476 LysM domain AL538_RS05930 PF00543 Nitrogen regulatory protein P-II AL538_RS05935 PF00034 Cytochrome c AL538_RS05940 PF01171 PP-loop family AL538_RS05940 PF09179 TilS substrate binding domain AL538_RS05940 PF11734 TilS substrate C-terminal domain AL538_RS05945 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AL538_RS05950 PF02811 PHP domain AL538_RS05950 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AL538_RS05950 PF01336 OB-fold nucleic acid binding domain AL538_RS05950 PF14579 Helix-hairpin-helix motif AL538_RS05950 PF07733 Bacterial DNA polymerase III alpha NTPase domain AL538_RS05955 PF01351 Ribonuclease HII AL538_RS05960 PF02684 Lipid-A-disaccharide synthetase AL538_RS05965 PF00132 Bacterial transferase hexapeptide (six repeats) AL538_RS05965 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AL538_RS05970 PF07977 FabA-like domain AL538_RS05975 PF00132 Bacterial transferase hexapeptide (six repeats) AL538_RS05975 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AL538_RS05980 PF03938 Outer membrane protein (OmpH-like) AL538_RS05985 PF01103 Surface antigen AL538_RS05985 PF07244 Surface antigen variable number repeat AL538_RS05990 PF02163 Peptidase family M50 AL538_RS05990 PF17820 PDZ domain AL538_RS05995 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AL538_RS05995 PF13288 DXP reductoisomerase C-terminal domain AL538_RS05995 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AL538_RS06005 PF01255 Putative undecaprenyl diphosphate synthase AL538_RS06010 PF01765 Ribosome recycling factor AL538_RS06015 PF00696 Amino acid kinase family AL538_RS06020 PF00889 Elongation factor TS AL538_RS06025 PF00318 Ribosomal protein S2 AL538_RS06030 PF00557 Metallopeptidase family M24 AL538_RS06035 PF01909 Nucleotidyltransferase domain AL538_RS06035 PF01842 ACT domain AL538_RS06035 PF08335 GlnD PII-uridylyltransferase AL538_RS06035 PF01966 HD domain AL538_RS06040 PF11944 Protein of unknown function (DUF3461) AL538_RS06045 PF00849 RNA pseudouridylate synthase AL538_RS06050 PF04287 tRNA pseudouridine synthase C AL538_RS06080 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AL538_RS06090 PF01370 NAD dependent epimerase/dehydratase family AL538_RS06115 PF03806 AbgT putative transporter family AL538_RS06120 PF00444 Ribosomal protein L36 AL538_RS06125 PF01197 Ribosomal protein L31 AL538_RS06130 PF01980 tRNA-methyltransferase O AL538_RS06130 PF18389 TrmO C-terminal domain AL538_RS06135 PF03129 Anticodon binding domain AL538_RS06135 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AL538_RS06135 PF04073 Aminoacyl-tRNA editing domain AL538_RS06145 PF06786 Uncharacterised protein family (UPF0253) AL538_RS06155 PF00209 Sodium:neurotransmitter symporter family AL538_RS06160 PF00704 Glycosyl hydrolases family 18 AL538_RS06160 PF00041 Fibronectin type III domain AL538_RS06170 PF01272 Transcription elongation factor, GreA/GreB, C-term AL538_RS06170 PF03449 Transcription elongation factor, N-terminal AL538_RS06175 PF00271 Helicase conserved C-terminal domain AL538_RS06175 PF00570 HRDC domain AL538_RS06175 PF00270 DEAD/DEAH box helicase AL538_RS06175 PF09382 RQC domain AL538_RS06175 PF16124 RecQ zinc-binding AL538_RS06180 PF11798 IMS family HHH motif AL538_RS06180 PF11799 impB/mucB/samB family C-terminal domain AL538_RS06180 PF00817 impB/mucB/samB family AL538_RS06185 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS06185 PF00072 Response regulator receiver domain AL538_RS06195 PF02424 ApbE family AL538_RS06200 PF00970 Oxidoreductase FAD-binding domain AL538_RS06200 PF00111 2Fe-2S iron-sulfur cluster binding domain AL538_RS06200 PF00175 Oxidoreductase NAD-binding domain AL538_RS06205 PF02508 Rnf-Nqr subunit, membrane protein AL538_RS06210 PF02508 Rnf-Nqr subunit, membrane protein AL538_RS06215 PF04205 FMN-binding domain AL538_RS06220 PF03116 NQR2, RnfD, RnfE family AL538_RS06225 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) AL538_RS06225 PF11973 NQRA C-terminal domain AL538_RS06230 PF01722 BolA-like protein AL538_RS06235 PF05175 Methyltransferase small domain AL538_RS06245 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AL538_RS06250 PF07690 Major Facilitator Superfamily AL538_RS06260 PF04542 Sigma-70 region 2 AL538_RS06260 PF04545 Sigma-70, region 4 AL538_RS06280 PF03502 Nucleoside-specific channel-forming protein, Tsx AL538_RS06285 PF02558 Ketopantoate reductase PanE/ApbA AL538_RS06285 PF08546 Ketopantoate reductase PanE/ApbA C terminal AL538_RS06290 PF01965 DJ-1/PfpI family AL538_RS06295 PF00266 Aminotransferase class-V AL538_RS06300 PF02657 Fe-S metabolism associated domain AL538_RS06305 PF00899 ThiF family AL538_RS06310 PF06725 3D domain AL538_RS06310 PF03562 MltA specific insert domain AL538_RS06325 PF00696 Amino acid kinase family AL538_RS06325 PF00583 Acetyltransferase (GNAT) family AL538_RS06335 PF13538 UvrD-like helicase C-terminal domain AL538_RS06340 PF12705 PD-(D/E)XK nuclease superfamily AL538_RS06340 PF00580 UvrD/REP helicase N-terminal domain AL538_RS06340 PF13361 UvrD-like helicase C-terminal domain AL538_RS06345 PF17946 RecC C-terminal domain AL538_RS06350 PF00884 Sulfatase AL538_RS06350 PF11893 Domain of unknown function (DUF3413) AL538_RS06360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS06360 PF03466 LysR substrate binding domain AL538_RS06365 PF07130 YebG protein AL538_RS06380 PF14602 Hexapeptide repeat of succinyl-transferase AL538_RS06380 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle AL538_RS06385 PF03009 Glycerophosphoryl diester phosphodiesterase family AL538_RS06390 PF07690 Major Facilitator Superfamily AL538_RS06400 PF00230 Major intrinsic protein AL538_RS06405 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AL538_RS06405 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AL538_RS06410 PF00455 DeoR C terminal sensor domain AL538_RS06410 PF08220 DeoR-like helix-turn-helix domain AL538_RS06415 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AL538_RS06415 PF01266 FAD dependent oxidoreductase AL538_RS06420 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AL538_RS06420 PF01464 Transglycosylase SLT domain AL538_RS06440 PF01588 Putative tRNA binding domain AL538_RS06445 PF00356 Bacterial regulatory proteins, lacI family AL538_RS06450 PF01263 Aldose 1-epimerase AL538_RS06455 PF00288 GHMP kinases N terminal domain AL538_RS06455 PF08544 GHMP kinases C terminal AL538_RS06455 PF10509 Galactokinase galactose-binding signature AL538_RS06460 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AL538_RS06460 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AL538_RS06465 PF16363 GDP-mannose 4,6 dehydratase AL538_RS06470 PF00905 Penicillin binding protein transpeptidase domain AL538_RS06470 PF03717 Penicillin-binding Protein dimerisation domain AL538_RS06480 PF00356 Bacterial regulatory proteins, lacI family AL538_RS06485 PF00703 Glycosyl hydrolases family 2 AL538_RS06485 PF16353 Domain of unknown function(DUF4981) AL538_RS06485 PF02929 Beta galactosidase small chain AL538_RS06485 PF02837 Glycosyl hydrolases family 2, sugar binding domain AL538_RS06485 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AL538_RS06490 PF04074 YhcH/YjgK/YiaL AL538_RS06495 PF13520 Amino acid permease AL538_RS06500 PF03466 LysR substrate binding domain AL538_RS06500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS06545 PF00437 Type II/IV secretion system protein AL538_RS06560 PF04972 BON domain AL538_RS06560 PF13629 Pilus formation protein N terminal region AL538_RS06560 PF00263 Bacterial type II and III secretion system protein AL538_RS06585 PF12833 Helix-turn-helix domain AL538_RS06585 PF02805 Metal binding domain of Ada AL538_RS06590 PF00501 AMP-binding enzyme AL538_RS06600 PF03466 LysR substrate binding domain AL538_RS06600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS06605 PF00009 Elongation factor Tu GTP binding domain AL538_RS06605 PF00679 Elongation factor G C-terminus AL538_RS06605 PF03764 Elongation factor G, domain IV AL538_RS06605 PF14492 Elongation Factor G, domain II AL538_RS06605 PF03144 Elongation factor Tu domain 2 AL538_RS06610 PF18073 Rubredoxin metal binding domain AL538_RS06620 PF18429 Domain of unknown function (DUF5609) AL538_RS06630 PF01048 Phosphorylase superfamily AL538_RS06635 PF01676 Metalloenzyme superfamily AL538_RS06640 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AL538_RS06640 PF00591 Glycosyl transferase family, a/b domain AL538_RS06640 PF02885 Glycosyl transferase family, helical bundle domain AL538_RS06645 PF01791 DeoC/LacD family aldolase AL538_RS06650 PF01773 Na+ dependent nucleoside transporter N-terminus AL538_RS06650 PF07662 Na+ dependent nucleoside transporter C-terminus AL538_RS06650 PF07670 Nucleoside recognition AL538_RS06655 PF01026 TatD related DNase AL538_RS06660 PF00009 Elongation factor Tu GTP binding domain AL538_RS06660 PF16658 Class II release factor RF3, C-terminal domain AL538_RS06660 PF03144 Elongation factor Tu domain 2 AL538_RS06665 PF05230 MASE2 domain AL538_RS06665 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS06685 PF13508 Acetyltransferase (GNAT) domain AL538_RS06690 PF02036 SCP-2 sterol transfer family AL538_RS06695 PF03707 Bacterial signalling protein N terminal repeat AL538_RS06695 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS06695 PF00563 EAL domain AL538_RS06700 PF01136 Peptidase family U32 AL538_RS06705 PF01136 Peptidase family U32 AL538_RS06710 PF01554 MatE AL538_RS06720 PF07719 Tetratricopeptide repeat AL538_RS06720 PF13181 Tetratricopeptide repeat AL538_RS06725 PF00013 KH domain AL538_RS06725 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AL538_RS06725 PF03725 3' exoribonuclease family, domain 2 AL538_RS06725 PF01138 3' exoribonuclease family, domain 1 AL538_RS06725 PF00575 S1 RNA binding domain AL538_RS06730 PF00312 Ribosomal protein S15 AL538_RS06735 PF01509 TruB family pseudouridylate synthase (N terminal domain) AL538_RS06735 PF16198 tRNA pseudouridylate synthase B C-terminal domain AL538_RS06735 PF09157 Pseudouridine synthase II TruB, C-terminal AL538_RS06740 PF02033 Ribosome-binding factor A AL538_RS06745 PF04760 Translation initiation factor IF-2, N-terminal region AL538_RS06745 PF00009 Elongation factor Tu GTP binding domain AL538_RS06745 PF11987 Translation-initiation factor 2 AL538_RS06745 PF08364 Bacterial translation initiation factor IF-2 associated region AL538_RS06750 PF13184 NusA-like KH domain AL538_RS06750 PF08529 NusA N-terminal domain AL538_RS06750 PF00575 S1 RNA binding domain AL538_RS06755 PF17384 RimP C-terminal SH3 domain AL538_RS06755 PF02576 RimP N-terminal domain AL538_RS06770 PF03840 Preprotein translocase SecG subunit AL538_RS06775 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AL538_RS06775 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AL538_RS06775 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AL538_RS06775 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AL538_RS06780 PF00809 Pterin binding enzyme AL538_RS06785 PF01434 Peptidase family M41 AL538_RS06785 PF06480 FtsH Extracellular AL538_RS06785 PF17862 AAA+ lid domain AL538_RS06785 PF00004 ATPase family associated with various cellular activities (AAA) AL538_RS06790 PF01728 FtsJ-like methyltransferase AL538_RS06795 PF01985 CRS1 / YhbY (CRM) domain AL538_RS06800 PF01272 Transcription elongation factor, GreA/GreB, C-term AL538_RS06800 PF03449 Transcription elongation factor, N-terminal AL538_RS06805 PF13609 Gram-negative porin AL538_RS06810 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AL538_RS06820 PF00579 tRNA synthetases class I (W and Y) AL538_RS06825 PF01551 Peptidase family M23 AL538_RS06825 PF08525 Opacity-associated protein A N-terminal motif AL538_RS06825 PF01476 LysM domain AL538_RS06830 PF00873 AcrB/AcrD/AcrF family AL538_RS06835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL538_RS06840 PF01521 Iron-sulphur cluster biosynthesis AL538_RS06845 PF00202 Aminotransferase class-III AL538_RS06850 PF01594 AI-2E family transporter AL538_RS06855 PF08468 Methyltransferase small domain N-terminal AL538_RS06855 PF05175 Methyltransferase small domain AL538_RS06865 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS06865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS06865 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL538_RS06865 PF00072 Response regulator receiver domain AL538_RS06870 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL538_RS06875 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS06880 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS06880 PF12911 N-terminal TM domain of oligopeptide transport permease C AL538_RS06885 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL538_RS06885 PF00005 ABC transporter AL538_RS06890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL538_RS06890 PF00005 ABC transporter AL538_RS06900 PF01869 BadF/BadG/BcrA/BcrD ATPase family AL538_RS06905 PF00728 Glycosyl hydrolase family 20, catalytic domain AL538_RS06905 PF02838 Glycosyl hydrolase family 20, domain 2 AL538_RS06910 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain AL538_RS06910 PF06165 Glycosyltransferase family 36 AL538_RS06915 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AL538_RS06915 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AL538_RS06915 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AL538_RS06915 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AL538_RS06920 PF08402 TOBE domain AL538_RS06920 PF00005 ABC transporter AL538_RS06930 PF13416 Bacterial extracellular solute-binding protein AL538_RS06935 PF00909 Ammonium Transporter Family AL538_RS06940 PF00543 Nitrogen regulatory protein P-II AL538_RS06945 PF06062 Uncharacterised protein family (UPF0231) AL538_RS06950 PF11791 Aconitate B N-terminal domain AL538_RS06950 PF00330 Aconitase family (aconitate hydratase) AL538_RS06950 PF06434 Aconitate hydratase 2 N-terminus AL538_RS06955 PF01734 Patatin-like phospholipase AL538_RS06960 PF14814 Bifunctional transglycosylase second domain AL538_RS06960 PF00905 Penicillin binding protein transpeptidase domain AL538_RS06960 PF00912 Transglycosylase AL538_RS06965 PF04408 Helicase associated domain (HA2) AL538_RS06965 PF00270 DEAD/DEAH box helicase AL538_RS06965 PF00271 Helicase conserved C-terminal domain AL538_RS06965 PF08482 ATP-dependent helicase C-terminal AL538_RS06970 PF17746 SfsA N-terminal OB domain AL538_RS06970 PF03749 Sugar fermentation stimulation protein RE domain AL538_RS06975 PF01258 Prokaryotic dksA/traR C4-type zinc finger AL538_RS06980 PF00749 tRNA synthetases class I (E and Q), catalytic domain AL538_RS06990 PF01743 Poly A polymerase head domain AL538_RS06990 PF12627 Probable RNA and SrmB- binding site of polymerase A AL538_RS06990 PF12626 Polymerase A arginine-rich C-terminus AL538_RS06995 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AL538_RS07000 PF02548 Ketopantoate hydroxymethyltransferase AL538_RS07005 PF02569 Pantoate-beta-alanine ligase AL538_RS07010 PF03279 Bacterial lipid A biosynthesis acyltransferase AL538_RS07015 PF01061 ABC-2 type transporter AL538_RS07020 PF00005 ABC transporter AL538_RS07025 PF00916 Sulfate permease family AL538_RS07025 PF01740 STAS domain AL538_RS07030 PF00484 Carbonic anhydrase AL538_RS07035 PF00156 Phosphoribosyl transferase domain AL538_RS07040 PF00440 Bacterial regulatory proteins, tetR family AL538_RS07045 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL538_RS07045 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AL538_RS07050 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AL538_RS07050 PF00364 Biotin-requiring enzyme AL538_RS07050 PF02817 e3 binding domain AL538_RS07055 PF17831 Pyruvate dehydrogenase E1 component middle domain AL538_RS07055 PF00456 Transketolase, thiamine diphosphate binding domain AL538_RS07060 PF07729 FCD domain AL538_RS07060 PF00392 Bacterial regulatory proteins, gntR family AL538_RS07065 PF01510 N-acetylmuramoyl-L-alanine amidase AL538_RS07070 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AL538_RS07070 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AL538_RS07080 PF00114 Pilin (bacterial filament) AL538_RS07080 PF07963 Prokaryotic N-terminal methylation motif AL538_RS07085 PF00437 Type II/IV secretion system protein AL538_RS07085 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AL538_RS07090 PF00482 Type II secretion system (T2SS), protein F AL538_RS07095 PF06750 Bacterial Peptidase A24 N-terminal domain AL538_RS07095 PF01478 Type IV leader peptidase family AL538_RS07100 PF01121 Dephospho-CoA kinase AL538_RS07105 PF07072 Cell division protein AL538_RS07110 PF03884 DNA gyrase inhibitor YacG AL538_RS07115 PF01245 Ribosomal protein L19 AL538_RS07120 PF01746 tRNA (Guanine-1)-methyltransferase AL538_RS07125 PF01782 RimM N-terminal domain AL538_RS07125 PF05239 PRC-barrel domain AL538_RS07130 PF00886 Ribosomal protein S16 AL538_RS07135 PF02881 SRP54-type protein, helical bundle domain AL538_RS07135 PF00448 SRP54-type protein, GTPase domain AL538_RS07135 PF02978 Signal peptide binding domain AL538_RS07140 PF01578 Cytochrome C assembly protein AL538_RS07145 PF01595 Cyclin M transmembrane N-terminal domain AL538_RS07145 PF03471 Transporter associated domain AL538_RS07145 PF00571 CBS domain AL538_RS07150 PF02664 S-Ribosylhomocysteinase (LuxS) AL538_RS07160 PF04262 Glutamate-cysteine ligase AL538_RS07165 PF05193 Peptidase M16 inactive domain AL538_RS07165 PF00675 Insulinase (Peptidase family M16) AL538_RS07170 PF09335 SNARE associated Golgi protein AL538_RS07175 PF08240 Alcohol dehydrogenase GroES-like domain AL538_RS07175 PF00107 Zinc-binding dehydrogenase AL538_RS07180 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit AL538_RS07185 PF00364 Biotin-requiring enzyme AL538_RS07185 PF00682 HMGL-like AL538_RS07185 PF02436 Conserved carboxylase domain AL538_RS07190 PF04277 Oxaloacetate decarboxylase, gamma chain AL538_RS07245 PF02599 Global regulator protein family AL538_RS07250 PF13840 ACT domain AL538_RS07250 PF01842 ACT domain AL538_RS07250 PF00696 Amino acid kinase family AL538_RS07255 PF02272 DHHA1 domain AL538_RS07255 PF01411 tRNA synthetases class II (A) AL538_RS07255 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AL538_RS07260 PF02631 RecX family AL538_RS07265 PF00154 recA bacterial DNA recombination protein AL538_RS07270 PF02464 Competence-damaged protein AL538_RS07275 PF05190 MutS family domain IV AL538_RS07275 PF05192 MutS domain III AL538_RS07275 PF05188 MutS domain II AL538_RS07275 PF01624 MutS domain I AL538_RS07275 PF00488 MutS domain V AL538_RS07280 PF00140 Sigma-70 factor, region 1.2 AL538_RS07280 PF04542 Sigma-70 region 2 AL538_RS07280 PF04539 Sigma-70 region 3 AL538_RS07280 PF04545 Sigma-70, region 4 AL538_RS07285 PF01551 Peptidase family M23 AL538_RS07285 PF01476 LysM domain AL538_RS07295 PF01975 Survival protein SurE AL538_RS07300 PF01142 tRNA pseudouridine synthase D (TruD) AL538_RS07305 PF02542 YgbB family AL538_RS07310 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AL538_RS07315 PF04977 Septum formation initiator AL538_RS07320 PF00113 Enolase, C-terminal TIM barrel domain AL538_RS07320 PF03952 Enolase, N-terminal domain AL538_RS07325 PF00117 Glutamine amidotransferase class-I AL538_RS07325 PF06418 CTP synthase N-terminus AL538_RS07330 PF03819 MazG nucleotide pyrophosphohydrolase domain AL538_RS07335 PF13291 ACT domain AL538_RS07335 PF04607 Region found in RelA / SpoT proteins AL538_RS07335 PF02824 TGS domain AL538_RS07340 PF01938 TRAM domain AL538_RS07340 PF05958 tRNA (Uracil-5-)-methyltransferase AL538_RS07350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS07350 PF00072 Response regulator receiver domain AL538_RS07350 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AL538_RS07350 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS07350 PF00672 HAMP domain AL538_RS07350 PF01627 Hpt domain AL538_RS07355 PF01648 4'-phosphopantetheinyl transferase superfamily AL538_RS07360 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AL538_RS07365 PF02565 Recombination protein O C terminal AL538_RS07365 PF11967 Recombination protein O N terminal AL538_RS07370 PF01926 50S ribosome-binding GTPase AL538_RS07370 PF07650 KH domain AL538_RS07375 PF00035 Double-stranded RNA binding motif AL538_RS07375 PF14622 Ribonuclease-III-like AL538_RS07380 PF10502 Signal peptidase, peptidase S26 AL538_RS07385 PF06421 GTP-binding protein LepA C-terminus AL538_RS07385 PF03144 Elongation factor Tu domain 2 AL538_RS07385 PF00009 Elongation factor Tu GTP binding domain AL538_RS07385 PF00679 Elongation factor G C-terminus AL538_RS07395 PF17188 MucB/RseB C-terminal domain AL538_RS07395 PF03888 MucB/RseB N-terminal domain AL538_RS07400 PF03873 Anti sigma-E protein RseA, C-terminal domain AL538_RS07400 PF03872 Anti sigma-E protein RseA, N-terminal domain AL538_RS07405 PF08281 Sigma-70, region 4 AL538_RS07405 PF04542 Sigma-70 region 2 AL538_RS07415 PF02910 Fumarate reductase flavoprotein C-term AL538_RS07415 PF00890 FAD binding domain AL538_RS07425 PF03937 Flavinator of succinate dehydrogenase AL538_RS07445 PF01494 FAD binding domain AL538_RS07450 PF01494 FAD binding domain AL538_RS07455 PF03695 Uncharacterised protein family (UPF0149) AL538_RS07465 PF05164 Cell division protein ZapA AL538_RS07475 PF01812 5-formyltetrahydrofolate cyclo-ligase family AL538_RS07480 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AL538_RS07485 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AL538_RS07485 PF01842 ACT domain AL538_RS07485 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AL538_RS07490 PF04402 Protein of unknown function (DUF541) AL538_RS07495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS07495 PF03466 LysR substrate binding domain AL538_RS07500 PF01810 LysE type translocator AL538_RS07510 PF05552 Conserved TM helix AL538_RS07510 PF00924 Mechanosensitive ion channel AL538_RS07515 PF01116 Fructose-bisphosphate aldolase class-II AL538_RS07520 PF00162 Phosphoglycerate kinase AL538_RS07525 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AL538_RS07525 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AL538_RS07535 PF02780 Transketolase, C-terminal domain AL538_RS07535 PF00456 Transketolase, thiamine diphosphate binding domain AL538_RS07535 PF02779 Transketolase, pyrimidine binding domain AL538_RS07540 PF02772 S-adenosylmethionine synthetase, central domain AL538_RS07540 PF02773 S-adenosylmethionine synthetase, C-terminal domain AL538_RS07540 PF00438 S-adenosylmethionine synthetase, N-terminal domain AL538_RS07550 PF17283 SprT-like zinc ribbon domain AL538_RS07550 PF10263 SprT-like family AL538_RS07560 PF04231 Endonuclease I AL538_RS07565 PF04452 RNA methyltransferase AL538_RS07570 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AL538_RS07570 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AL538_RS07575 PF02622 Uncharacterized ACR, COG1678 AL538_RS07580 PF03652 Holliday junction resolvase AL538_RS07585 PF00437 Type II/IV secretion system protein AL538_RS07590 PF00437 Type II/IV secretion system protein AL538_RS07595 PF01168 Alanine racemase, N-terminal domain AL538_RS07600 PF14748 Pyrroline-5-carboxylate reductase dimerisation AL538_RS07600 PF03807 NADP oxidoreductase coenzyme F420-dependent AL538_RS07605 PF02325 YGGT family AL538_RS07610 PF02594 Uncharacterised ACR, YggU family COG1872 AL538_RS07620 PF01725 Ham1 family AL538_RS07625 PF06969 HemN C-terminal domain AL538_RS07625 PF04055 Radical SAM superfamily AL538_RS07630 PF04960 Glutaminase AL538_RS07635 PF02086 D12 class N6 adenine-specific DNA methyltransferase AL538_RS07640 PF02390 Putative methyltransferase AL538_RS07645 PF00633 Helix-hairpin-helix motif AL538_RS07645 PF00730 HhH-GPD superfamily base excision DNA repair protein AL538_RS07645 PF14815 NUDIX domain AL538_RS07650 PF04362 Bacterial Fe(2+) trafficking AL538_RS07655 PF01464 Transglycosylase SLT domain AL538_RS07655 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AL538_RS07695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS07695 PF00672 HAMP domain AL538_RS07695 PF17200 Single Cache domain 2 AL538_RS07725 PF00171 Aldehyde dehydrogenase family AL538_RS07775 PF00072 Response regulator receiver domain AL538_RS07780 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AL538_RS07780 PF00356 Bacterial regulatory proteins, lacI family AL538_RS07785 PF04794 YdjC-like protein AL538_RS07790 PF02056 Family 4 glycosyl hydrolase AL538_RS07790 PF11975 Family 4 glycosyl hydrolase C-terminal domain AL538_RS07795 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AL538_RS07800 PF02378 Phosphotransferase system, EIIC AL538_RS07805 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AL538_RS07825 PF00106 short chain dehydrogenase AL538_RS07835 PF03739 Lipopolysaccharide export system permease LptF/LptG AL538_RS07840 PF03739 Lipopolysaccharide export system permease LptF/LptG AL538_RS07845 PF00883 Cytosol aminopeptidase family, catalytic domain AL538_RS07845 PF02789 Cytosol aminopeptidase family, N-terminal domain AL538_RS07850 PF04364 DNA polymerase III chi subunit, HolC AL538_RS07855 PF10458 Valyl tRNA synthetase tRNA binding arm AL538_RS07855 PF00133 tRNA synthetases class I (I, L, M and V) AL538_RS07855 PF08264 Anticodon-binding domain of tRNA AL538_RS07865 PF00583 Acetyltransferase (GNAT) family AL538_RS07875 PF06877 Regulator of ribonuclease activity B AL538_RS07885 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AL538_RS07885 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AL538_RS07895 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AL538_RS07895 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AL538_RS07900 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain AL538_RS07900 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain AL538_RS07905 PF01042 Endoribonuclease L-PSP AL538_RS07910 PF01553 Acyltransferase AL538_RS07915 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AL538_RS07920 PF01722 BolA-like protein AL538_RS07930 PF05494 MlaC protein AL538_RS07935 PF02470 MlaD protein AL538_RS07940 PF02405 Permease MlaE AL538_RS07945 PF00005 ABC transporter AL538_RS07950 PF01699 Sodium/calcium exchanger protein AL538_RS07955 PF00571 CBS domain AL538_RS07955 PF01380 SIS domain AL538_RS07965 PF03968 OstA-like protein AL538_RS07970 PF00005 ABC transporter AL538_RS07970 PF12399 Branched-chain amino acid ATP-binding cassette transporter AL538_RS07975 PF00309 Sigma-54 factor, Activator interacting domain (AID) AL538_RS07975 PF04963 Sigma-54 factor, core binding domain AL538_RS07975 PF04552 Sigma-54, DNA binding domain AL538_RS07980 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AL538_RS07985 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AL538_RS07990 PF03668 P-loop ATPase protein family AL538_RS07995 PF00381 PTS HPr component phosphorylation site AL538_RS08000 PF03448 MgtE intracellular N domain AL538_RS08000 PF01769 Divalent cation transporter AL538_RS08000 PF00571 CBS domain AL538_RS08005 PF01523 Putative modulator of DNA gyrase AL538_RS08010 PF04751 Protein of unknown function (DUF615) AL538_RS08015 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AL538_RS08015 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AL538_RS08020 PF00849 RNA pseudouridylate synthase AL538_RS08030 PF18339 RapA N-terminal Tudor like domain 1 AL538_RS08030 PF00271 Helicase conserved C-terminal domain AL538_RS08030 PF00176 SNF2 family N-terminal domain AL538_RS08030 PF18337 RapA N-terminal Tudor like domain AL538_RS08030 PF12137 RNA polymerase recycling family C-terminal AL538_RS08035 PF13638 PIN domain AL538_RS08035 PF02562 PhoH-like protein AL538_RS08040 PF01523 Putative modulator of DNA gyrase AL538_RS08045 PF00795 Carbon-nitrogen hydrolase AL538_RS08050 PF13116 Protein of unknown function AL538_RS08050 PF13502 AsmA-like C-terminal region AL538_RS08055 PF10150 Ribonuclease E/G family AL538_RS08055 PF00575 S1 RNA binding domain AL538_RS08060 PF02545 Maf-like protein AL538_RS08065 PF04093 rod shape-determining protein MreD AL538_RS08070 PF04085 rod shape-determining protein MreC AL538_RS08110 PF07963 Prokaryotic N-terminal methylation motif AL538_RS08120 PF00482 Type II secretion system (T2SS), protein F AL538_RS08125 PF00437 Type II/IV secretion system protein AL538_RS08125 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AL538_RS08135 PF01471 Putative peptidoglycan binding domain AL538_RS08135 PF13401 AAA domain AL538_RS08140 PF03958 Bacterial type II/III secretion system short domain AL538_RS08140 PF00263 Bacterial type II and III secretion system protein AL538_RS08160 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS08160 PF17157 Gammaproteobacterial periplasmic sensor domain AL538_RS08160 PF00563 EAL domain AL538_RS08165 PF00436 Single-strand binding protein family AL538_RS08170 PF00196 Bacterial regulatory proteins, luxR family AL538_RS08175 PF00483 Nucleotidyl transferase AL538_RS08180 PF17760 UvrA interaction domain AL538_RS08180 PF17755 UvrA DNA-binding domain AL538_RS08180 PF00005 ABC transporter AL538_RS08190 PF00266 Aminotransferase class-V AL538_RS08200 PF00696 Amino acid kinase family AL538_RS08200 PF01842 ACT domain AL538_RS08205 PF02310 B12 binding domain AL538_RS08205 PF02607 B12 binding domain AL538_RS08205 PF02574 Homocysteine S-methyltransferase AL538_RS08205 PF02965 Vitamin B12 dependent methionine synthase, activation domain AL538_RS08205 PF00809 Pterin binding enzyme AL538_RS08210 PF00999 Sodium/hydrogen exchanger family AL538_RS08270 PF01507 Phosphoadenosine phosphosulfate reductase family AL538_RS08275 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AL538_RS08275 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AL538_RS08280 PF00667 FAD binding domain AL538_RS08280 PF00258 Flavodoxin AL538_RS08280 PF00175 Oxidoreductase NAD-binding domain AL538_RS08300 PF01207 Dihydrouridine synthase (Dus) AL538_RS08305 PF01475 Ferric uptake regulator family AL538_RS08315 PF00342 Phosphoglucose isomerase AL538_RS08320 PF01894 Uncharacterised protein family UPF0047 AL538_RS08330 PF01168 Alanine racemase, N-terminal domain AL538_RS08330 PF00842 Alanine racemase, C-terminal domain AL538_RS08335 PF00772 DnaB-like helicase N terminal domain AL538_RS08335 PF03796 DnaB-like helicase C terminal domain AL538_RS08345 PF03948 Ribosomal protein L9, C-terminal domain AL538_RS08345 PF01281 Ribosomal protein L9, N-terminal domain AL538_RS08350 PF01084 Ribosomal protein S18 AL538_RS08355 PF01250 Ribosomal protein S6 AL538_RS08360 PF00834 Ribulose-phosphate 3 epimerase family AL538_RS08365 PF02086 D12 class N6 adenine-specific DNA methyltransferase AL538_RS08375 PF01761 3-dehydroquinate synthase AL538_RS08380 PF01202 Shikimate kinase AL538_RS08385 PF00263 Bacterial type II and III secretion system protein AL538_RS08385 PF11741 AMIN domain AL538_RS08385 PF07660 Secretin and TonB N terminus short domain AL538_RS08385 PF03958 Bacterial type II/III secretion system short domain AL538_RS08390 PF04351 Pilus assembly protein, PilP AL538_RS08410 PF00905 Penicillin binding protein transpeptidase domain AL538_RS08410 PF00912 Transglycosylase AL538_RS08410 PF17092 Penicillin-binding protein OB-like domain AL538_RS08415 PF03466 LysR substrate binding domain AL538_RS08415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS08420 PF08534 Redoxin AL538_RS08420 PF00462 Glutaredoxin AL538_RS08425 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL538_RS08425 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AL538_RS08440 PF14698 Argininosuccinate lyase C-terminal AL538_RS08440 PF00583 Acetyltransferase (GNAT) family AL538_RS08440 PF00206 Lyase AL538_RS08445 PF00764 Arginosuccinate synthase AL538_RS08450 PF00696 Amino acid kinase family AL538_RS08455 PF01118 Semialdehyde dehydrogenase, NAD binding domain AL538_RS08455 PF02774 Semialdehyde dehydrogenase, dimerisation domain AL538_RS08460 PF01546 Peptidase family M20/M25/M40 AL538_RS08460 PF07687 Peptidase dimerisation domain AL538_RS08465 PF00311 Phosphoenolpyruvate carboxylase AL538_RS08475 PF02219 Methylenetetrahydrofolate reductase AL538_RS08480 PF03447 Homoserine dehydrogenase, NAD binding domain AL538_RS08480 PF00742 Homoserine dehydrogenase AL538_RS08480 PF00696 Amino acid kinase family AL538_RS08485 PF01053 Cys/Met metabolism PLP-dependent enzyme AL538_RS08490 PF01340 Met Apo-repressor, MetJ AL538_RS08495 PF03949 Malic enzyme, NAD binding domain AL538_RS08495 PF00390 Malic enzyme, N-terminal domain AL538_RS08500 PF00210 Ferritin-like domain AL538_RS08505 PF04324 BFD-like [2Fe-2S] binding domain AL538_RS08510 PF00009 Elongation factor Tu GTP binding domain AL538_RS08510 PF03143 Elongation factor Tu C-terminal domain AL538_RS08510 PF03144 Elongation factor Tu domain 2 AL538_RS08515 PF03764 Elongation factor G, domain IV AL538_RS08515 PF00009 Elongation factor Tu GTP binding domain AL538_RS08515 PF14492 Elongation Factor G, domain II AL538_RS08515 PF03144 Elongation factor Tu domain 2 AL538_RS08515 PF00679 Elongation factor G C-terminus AL538_RS08520 PF00177 Ribosomal protein S7p/S5e AL538_RS08525 PF00164 Ribosomal protein S12/S23 AL538_RS08530 PF04077 DsrH like protein AL538_RS08535 PF02635 DsrE/DsrF-like family AL538_RS08540 PF02635 DsrE/DsrF-like family AL538_RS08545 PF08348 YheO-like PAS domain AL538_RS08545 PF13309 HTH domain AL538_RS08550 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AL538_RS08550 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AL538_RS08560 PF04102 SlyX AL538_RS08565 PF01112 Asparaginase AL538_RS08575 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AL538_RS08585 PF00999 Sodium/hydrogen exchanger family AL538_RS08585 PF02254 TrkA-N domain AL538_RS08590 PF02525 Flavodoxin-like fold AL538_RS08600 PF00005 ABC transporter AL538_RS08600 PF12848 ABC transporter AL538_RS08610 PF00561 alpha/beta hydrolase fold AL538_RS08615 PF06794 Uncharacterised protein family (UPF0270) AL538_RS08620 PF00485 Phosphoribulokinase / Uridine kinase family AL538_RS08625 PF00027 Cyclic nucleotide-binding domain AL538_RS08625 PF13545 Crp-like helix-turn-helix domain AL538_RS08635 PF00171 Aldehyde dehydrogenase family AL538_RS08640 PF04958 Arginine N-succinyltransferase beta subunit AL538_RS08645 PF00202 Aminotransferase class-III AL538_RS08650 PF00117 Glutamine amidotransferase class-I AL538_RS08660 PF00267 Gram-negative porin AL538_RS08670 PF00579 tRNA synthetases class I (W and Y) AL538_RS08675 PF13419 Haloacid dehalogenase-like hydrolase AL538_RS08680 PF08032 RNA 2'-O ribose methyltransferase substrate binding AL538_RS08680 PF00588 SpoU rRNA Methylase family AL538_RS08685 PF17876 Cold shock domain AL538_RS08685 PF00773 RNB domain AL538_RS08685 PF08461 Ribonuclease R winged-helix domain AL538_RS08685 PF00575 S1 RNA binding domain AL538_RS08685 PF08206 Ribonuclease B OB domain AL538_RS08690 PF02082 Transcriptional regulator AL538_RS08695 PF00042 Globin AL538_RS08695 PF00175 Oxidoreductase NAD-binding domain AL538_RS08695 PF00970 Oxidoreductase FAD-binding domain AL538_RS08700 PF08238 Sel1 repeat AL538_RS08710 PF00709 Adenylosuccinate synthetase AL538_RS08715 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) AL538_RS08720 PF01145 SPFH domain / Band 7 family AL538_RS08725 PF12221 Bacterial membrane protein N terminal AL538_RS08725 PF01145 SPFH domain / Band 7 family AL538_RS08730 PF16360 GTP-binding GTPase Middle Region AL538_RS08730 PF13167 GTP-binding GTPase N-terminal AL538_RS08730 PF01926 50S ribosome-binding GTPase AL538_RS08735 PF17209 Hfq protein AL538_RS08745 PF08676 MutL C terminal dimerisation domain AL538_RS08745 PF01119 DNA mismatch repair protein, C-terminal domain AL538_RS08750 PF01520 N-acetylmuramoyl-L-alanine amidase AL538_RS08755 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AL538_RS08760 PF08331 Domain of unknown function (DUF1730) AL538_RS08825 PF00929 Exonuclease AL538_RS08830 PF03193 RsgA GTPase AL538_RS08835 PF02666 Phosphatidylserine decarboxylase AL538_RS08840 PF00939 Sodium:sulfate symporter transmembrane region AL538_RS08845 PF00672 HAMP domain AL538_RS08845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS08855 PF01676 Metalloenzyme superfamily AL538_RS08855 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AL538_RS08860 PF00581 Rhodanese-like domain AL538_RS08865 PF02556 Preprotein translocase subunit SecB AL538_RS08870 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AL538_RS08870 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AL538_RS08875 PF00132 Bacterial transferase hexapeptide (six repeats) AL538_RS08875 PF06426 Serine acetyltransferase, N-terminal AL538_RS08880 PF01551 Peptidase family M23 AL538_RS08890 PF08360 QacR-like protein, C-terminal region AL538_RS08890 PF00440 Bacterial regulatory proteins, tetR family AL538_RS08900 PF00152 tRNA synthetases class II (D, K and N) AL538_RS08905 PF00890 FAD binding domain AL538_RS08905 PF02910 Fumarate reductase flavoprotein C-term AL538_RS08910 PF13085 2Fe-2S iron-sulfur cluster binding domain AL538_RS08910 PF13183 4Fe-4S dicluster domain AL538_RS08915 PF02300 Fumarate reductase subunit C AL538_RS08920 PF02313 Fumarate reductase subunit D AL538_RS08935 PF08207 Elongation factor P (EF-P) KOW-like domain AL538_RS08935 PF09285 Elongation factor P, C-terminal AL538_RS08935 PF01132 Elongation factor P (EF-P) OB domain AL538_RS08940 PF04055 Radical SAM superfamily AL538_RS08945 PF02308 MgtC family AL538_RS08970 PF02796 Helix-turn-helix domain of resolvase AL538_RS08970 PF00239 Resolvase, N terminal domain AL538_RS08980 PF00118 TCP-1/cpn60 chaperonin family AL538_RS08985 PF00166 Chaperonin 10 Kd subunit AL538_RS08990 PF01554 MatE AL538_RS08995 PF00365 Phosphofructokinase AL538_RS09000 PF01545 Cation efflux family AL538_RS09000 PF16916 Dimerisation domain of Zinc Transporter AL538_RS09005 PF07813 LTXXQ motif family protein AL538_RS09010 PF00486 Transcriptional regulatory protein, C terminal AL538_RS09010 PF00072 Response regulator receiver domain AL538_RS09015 PF16527 Two-component sensor protein CpxA, periplasmic domain AL538_RS09015 PF00672 HAMP domain AL538_RS09015 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS09015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS09020 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AL538_RS09020 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AL538_RS09025 PF00588 SpoU rRNA Methylase family AL538_RS09030 PF04186 FxsA cytoplasmic membrane protein AL538_RS09035 PF10415 Fumarase C C-terminus AL538_RS09035 PF00206 Lyase AL538_RS09040 PF03605 Anaerobic c4-dicarboxylate membrane transporter AL538_RS09045 PF02683 Cytochrome C biogenesis protein transmembrane region AL538_RS09045 PF11412 Disulphide bond corrector protein DsbC AL538_RS09050 PF00196 Bacterial regulatory proteins, luxR family AL538_RS09050 PF00072 Response regulator receiver domain AL538_RS09055 PF01914 MarC family integral membrane protein AL538_RS09065 PF00474 Sodium:solute symporter family AL538_RS09080 PF10415 Fumarase C C-terminus AL538_RS09080 PF00206 Lyase AL538_RS09085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS09085 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS09085 PF00072 Response regulator receiver domain AL538_RS09085 PF01627 Hpt domain AL538_RS09085 PF00672 HAMP domain AL538_RS09090 PF12832 MFS_1 like family AL538_RS09105 PF00501 AMP-binding enzyme AL538_RS09105 PF16177 Acetyl-coenzyme A synthetase N-terminus AL538_RS09105 PF13193 AMP-binding enzyme C-terminal domain AL538_RS09110 PF01220 Dehydroquinase class II AL538_RS09115 PF00364 Biotin-requiring enzyme AL538_RS09120 PF00289 Biotin carboxylase, N-terminal domain AL538_RS09120 PF02785 Biotin carboxylase C-terminal domain AL538_RS09120 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AL538_RS09135 PF01207 Dihydrouridine synthase (Dus) AL538_RS09140 PF02954 Bacterial regulatory protein, Fis family AL538_RS09145 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS09145 PF08448 PAS fold AL538_RS09195 PF00107 Zinc-binding dehydrogenase AL538_RS09195 PF08240 Alcohol dehydrogenase GroES-like domain AL538_RS09200 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AL538_RS09200 PF01276 Orn/Lys/Arg decarboxylase, major domain AL538_RS09200 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AL538_RS09205 PF13520 Amino acid permease AL538_RS09215 PF18500 CadC C-terminal domain 1 AL538_RS09215 PF00486 Transcriptional regulatory protein, C terminal AL538_RS09220 PF13411 MerR HTH family regulatory protein AL538_RS09230 PF02142 MGS-like domain AL538_RS09230 PF01808 AICARFT/IMPCHase bienzyme AL538_RS09235 PF02844 Phosphoribosylglycinamide synthetase, N domain AL538_RS09235 PF02843 Phosphoribosylglycinamide synthetase, C domain AL538_RS09235 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AL538_RS09245 PF00216 Bacterial DNA-binding protein AL538_RS09250 PF00571 CBS domain AL538_RS09250 PF01595 Cyclin M transmembrane N-terminal domain AL538_RS09255 PF04222 Protein of unknown function (DUF416) AL538_RS09260 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AL538_RS09265 PF03167 Uracil DNA glycosylase superfamily AL538_RS09270 PF01208 Uroporphyrinogen decarboxylase (URO-D) AL538_RS09285 PF00293 NUDIX domain AL538_RS09285 PF09297 NADH pyrophosphatase zinc ribbon domain AL538_RS09290 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ AL538_RS09300 PF00623 RNA polymerase Rpb1, domain 2 AL538_RS09300 PF04983 RNA polymerase Rpb1, domain 3 AL538_RS09300 PF05000 RNA polymerase Rpb1, domain 4 AL538_RS09300 PF04997 RNA polymerase Rpb1, domain 1 AL538_RS09300 PF04998 RNA polymerase Rpb1, domain 5 AL538_RS09305 PF04560 RNA polymerase Rpb2, domain 7 AL538_RS09305 PF00562 RNA polymerase Rpb2, domain 6 AL538_RS09305 PF04563 RNA polymerase beta subunit AL538_RS09305 PF04565 RNA polymerase Rpb2, domain 3 AL538_RS09305 PF04561 RNA polymerase Rpb2, domain 2 AL538_RS09305 PF10385 RNA polymerase beta subunit external 1 domain AL538_RS09310 PF00542 Ribosomal protein L7/L12 C-terminal domain AL538_RS09310 PF16320 Ribosomal protein L7/L12 dimerisation domain AL538_RS09315 PF00466 Ribosomal protein L10 AL538_RS09320 PF00687 Ribosomal protein L1p/L10e family AL538_RS09325 PF03946 Ribosomal protein L11, N-terminal domain AL538_RS09325 PF00298 Ribosomal protein L11, RNA binding domain AL538_RS09330 PF02357 Transcription termination factor nusG AL538_RS09330 PF00467 KOW motif AL538_RS09335 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AL538_RS09345 PF00009 Elongation factor Tu GTP binding domain AL538_RS09345 PF03143 Elongation factor Tu C-terminal domain AL538_RS09345 PF03144 Elongation factor Tu domain 2 AL538_RS09370 PF00485 Phosphoribulokinase / Uridine kinase family AL538_RS09375 PF03099 Biotin/lipoate A/B protein ligase family AL538_RS09375 PF02237 Biotin protein ligase C terminal domain AL538_RS09375 PF08279 HTH domain AL538_RS09380 PF01565 FAD binding domain AL538_RS09380 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AL538_RS09390 PF13091 PLD-like domain AL538_RS09470 PF01177 Asp/Glu/Hydantoin racemase AL538_RS09480 PF07715 TonB-dependent Receptor Plug Domain AL538_RS09480 PF00593 TonB dependent receptor AL538_RS09485 PF05958 tRNA (Uracil-5-)-methyltransferase AL538_RS09540 PF06803 Protein of unknown function (DUF1232) AL538_RS09555 PF04002 RadC-like JAB domain AL538_RS09560 PF12728 Helix-turn-helix domain AL538_RS09560 PF00145 C-5 cytosine-specific DNA methylase AL538_RS09575 PF00589 Phage integrase family AL538_RS09575 PF13356 Arm DNA-binding domain AL538_RS09585 PF00440 Bacterial regulatory proteins, tetR family AL538_RS09590 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL538_RS09590 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AL538_RS09595 PF01554 MatE AL538_RS09605 PF01726 LexA DNA binding domain AL538_RS09605 PF00717 Peptidase S24-like AL538_RS09615 PF01553 Acyltransferase AL538_RS09620 PF01040 UbiA prenyltransferase family AL538_RS09625 PF04345 Chorismate lyase AL538_RS09630 PF03748 Flagellar basal body-associated protein FliL AL538_RS09635 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease AL538_RS09635 PF01694 Rhomboid family AL538_RS09640 PF00581 Rhodanese-like domain AL538_RS09645 PF00140 Sigma-70 factor, region 1.2 AL538_RS09645 PF04542 Sigma-70 region 2 AL538_RS09645 PF04545 Sigma-70, region 4 AL538_RS09650 PF18075 FtsX extracellular domain AL538_RS09655 PF00005 ABC transporter AL538_RS09660 PF00448 SRP54-type protein, GTPase domain AL538_RS09660 PF02881 SRP54-type protein, helical bundle domain AL538_RS09675 PF01914 MarC family integral membrane protein AL538_RS09700 PF10694 Protein of unknown function (DUF2500) AL538_RS09725 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AL538_RS09725 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AL538_RS09730 PF01022 Bacterial regulatory protein, arsR family AL538_RS09735 PF00563 EAL domain AL538_RS09735 PF08668 HDOD domain AL538_RS09740 PF01810 LysE type translocator AL538_RS09745 PF12146 Serine aminopeptidase, S33 AL538_RS09765 PF03942 DTW domain AL538_RS09770 PF10442 FIST C domain AL538_RS09770 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS09770 PF08495 FIST N domain AL538_RS09770 PF00563 EAL domain AL538_RS09775 PF13419 Haloacid dehalogenase-like hydrolase AL538_RS09780 PF00589 Phage integrase family AL538_RS09780 PF02899 Phage integrase, N-terminal SAM-like domain AL538_RS09790 PF01678 Diaminopimelate epimerase AL538_RS09795 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AL538_RS09795 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AL538_RS09805 PF01491 Frataxin-like domain AL538_RS09810 PF12633 Adenylate cyclase NT domain AL538_RS09810 PF01295 Adenylate cyclase, class-I AL538_RS09815 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AL538_RS09815 PF03900 Porphobilinogen deaminase, C-terminal domain AL538_RS09820 PF02602 Uroporphyrinogen-III synthase HemD AL538_RS09825 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase AL538_RS09830 PF07219 HemY protein N-terminus AL538_RS09870 PF00175 Oxidoreductase NAD-binding domain AL538_RS09875 PF00111 2Fe-2S iron-sulfur cluster binding domain AL538_RS09880 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AL538_RS09890 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AL538_RS09890 PF07498 Rho termination factor, N-terminal domain AL538_RS09890 PF07497 Rho termination factor, RNA-binding domain AL538_RS09895 PF00085 Thioredoxin AL538_RS09900 PF00271 Helicase conserved C-terminal domain AL538_RS09900 PF00270 DEAD/DEAH box helicase AL538_RS09905 PF02541 Ppx/GppA phosphatase family AL538_RS09910 PF02592 Putative vitamin uptake transporter AL538_RS09925 PF00270 DEAD/DEAH box helicase AL538_RS09925 PF09382 RQC domain AL538_RS09925 PF00570 HRDC domain AL538_RS09925 PF16124 RecQ zinc-binding AL538_RS09925 PF00271 Helicase conserved C-terminal domain AL538_RS09930 PF00892 EamA-like transporter family AL538_RS09940 PF01810 LysE type translocator AL538_RS09960 PF00580 UvrD/REP helicase N-terminal domain AL538_RS09960 PF13361 UvrD-like helicase C-terminal domain AL538_RS09970 PF05114 Protein of unknown function (DUF692) AL538_RS09990 PF07690 Major Facilitator Superfamily AL538_RS09995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS09995 PF03466 LysR substrate binding domain AL538_RS10000 PF01321 Creatinase/Prolidase N-terminal domain AL538_RS10000 PF00557 Metallopeptidase family M24 AL538_RS10000 PF00557 Metallopeptidase family M24 AL538_RS10000 PF01321 Creatinase/Prolidase N-terminal domain AL538_RS10005 PF04055 Radical SAM superfamily AL538_RS10005 PF06968 Biotin and Thiamin Synthesis associated domain AL538_RS10010 PF05690 Thiazole biosynthesis protein ThiG AL538_RS10015 PF02597 ThiS family AL538_RS10020 PF00899 ThiF family AL538_RS10025 PF02581 Thiamine monophosphate synthase AL538_RS10030 PF01964 Radical SAM ThiC family AL538_RS10030 PF13667 ThiC-associated domain AL538_RS10035 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AL538_RS10040 PF07732 Multicopper oxidase AL538_RS10040 PF07731 Multicopper oxidase AL538_RS10040 PF00394 Multicopper oxidase AL538_RS10085 PF00132 Bacterial transferase hexapeptide (six repeats) AL538_RS10095 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AL538_RS10095 PF01488 Shikimate / quinate 5-dehydrogenase AL538_RS10095 PF08501 Shikimate dehydrogenase substrate binding domain AL538_RS10100 PF01218 Coproporphyrinogen III oxidase AL538_RS10105 PF01300 Telomere recombination AL538_RS10110 PF00731 AIR carboxylase AL538_RS10115 PF02222 ATP-grasp domain AL538_RS10115 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AL538_RS10120 PF01396 Topoisomerase DNA binding C4 zinc finger AL538_RS10125 PF04361 Protein of unknown function (DUF494) AL538_RS10130 PF02481 DNA recombination-mediator protein A AL538_RS10130 PF17782 DprA winged helix domain AL538_RS10140 PF01327 Polypeptide deformylase AL538_RS10145 PF00551 Formyl transferase AL538_RS10145 PF02911 Formyl transferase, C-terminal domain AL538_RS10150 PF01029 NusB family AL538_RS10150 PF01189 16S rRNA methyltransferase RsmB/F AL538_RS10155 PF02254 TrkA-N domain AL538_RS10155 PF02080 TrkA-C domain AL538_RS10160 PF02386 Cation transport protein AL538_RS10170 PF03006 Haemolysin-III related AL538_RS10175 PF07070 SpoOM protein AL538_RS10185 PF06288 Protein of unknown function (DUF1040) AL538_RS10190 PF13746 4Fe-4S dicluster domain AL538_RS10190 PF12801 4Fe-4S binding domain AL538_RS10190 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AL538_RS10195 PF01636 Phosphotransferase enzyme family AL538_RS10200 PF01323 DSBA-like thioredoxin domain AL538_RS10205 PF01553 Acyltransferase AL538_RS10215 PF08448 PAS fold AL538_RS10215 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS10220 PF01078 Magnesium chelatase, subunit ChlI AL538_RS10220 PF13335 Magnesium chelatase, subunit ChlI C-terminal AL538_RS10225 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AL538_RS10225 PF00205 Thiamine pyrophosphate enzyme, central domain AL538_RS10225 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AL538_RS10235 PF01063 Amino-transferase class IV AL538_RS10240 PF00920 Dehydratase family AL538_RS10245 PF00291 Pyridoxal-phosphate dependent enzyme AL538_RS10245 PF00585 C-terminal regulatory domain of Threonine dehydratase AL538_RS10250 PF03466 LysR substrate binding domain AL538_RS10250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS10255 PF07690 Major Facilitator Superfamily AL538_RS10260 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL538_RS10265 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS10270 PF12804 MobA-like NTP transferase domain AL538_RS10270 PF00132 Bacterial transferase hexapeptide (six repeats) AL538_RS10275 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AL538_RS10275 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AL538_RS10280 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AL538_RS10280 PF02874 ATP synthase alpha/beta family, beta-barrel domain AL538_RS10285 PF00231 ATP synthase AL538_RS10290 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AL538_RS10290 PF02874 ATP synthase alpha/beta family, beta-barrel domain AL538_RS10290 PF00306 ATP synthase alpha/beta chain, C terminal domain AL538_RS10295 PF00213 ATP synthase delta (OSCP) subunit AL538_RS10300 PF00430 ATP synthase B/B' CF(0) AL538_RS10305 PF00137 ATP synthase subunit C AL538_RS10310 PF00119 ATP synthase A chain AL538_RS10315 PF03899 ATP synthase I chain AL538_RS10320 PF17762 HTH domain found in ParB protein AL538_RS10320 PF02195 ParB-like nuclease domain AL538_RS10325 PF13614 AAA domain AL538_RS10330 PF02527 rRNA small subunit methyltransferase G AL538_RS10335 PF01134 Glucose inhibited division protein A AL538_RS10335 PF13932 GidA associated domain AL538_RS10340 PF00258 Flavodoxin AL538_RS10345 PF01926 50S ribosome-binding GTPase AL538_RS10345 PF12631 MnmE helical domain AL538_RS10345 PF10396 GTP-binding protein TrmE N-terminus AL538_RS10350 PF02096 60Kd inner membrane protein AL538_RS10350 PF14849 YidC periplasmic domain AL538_RS10355 PF01809 Putative membrane protein insertion efficiency factor AL538_RS10360 PF00825 Ribonuclease P AL538_RS10365 PF00468 Ribosomal protein L34 AL538_RS10370 PF00005 ABC transporter AL538_RS10375 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS10380 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL538_RS10390 PF11638 DnaA N-terminal domain AL538_RS10390 PF00308 Bacterial dnaA protein AL538_RS10390 PF08299 Bacterial dnaA protein helix-turn-helix AL538_RS10395 PF00712 DNA polymerase III beta subunit, N-terminal domain AL538_RS10395 PF02767 DNA polymerase III beta subunit, central domain AL538_RS10395 PF02768 DNA polymerase III beta subunit, C-terminal domain AL538_RS10400 PF02463 RecF/RecN/SMC N terminal domain AL538_RS10405 PF00204 DNA gyrase B AL538_RS10405 PF00986 DNA gyrase B subunit, carboxyl terminus AL538_RS10405 PF18053 DNA gyrase B subunit insert domain AL538_RS10405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS10405 PF01751 Toprim domain AL538_RS10410 PF00011 Hsp20/alpha crystallin family AL538_RS10415 PF00155 Aminotransferase class I and II AL538_RS10420 PF00128 Alpha amylase, catalytic domain AL538_RS10425 PF02092 Glycyl-tRNA synthetase beta subunit AL538_RS10425 PF05746 DALR anticodon binding domain AL538_RS10430 PF02091 Glycyl-tRNA synthetase alpha subunit AL538_RS10435 PF01169 Uncharacterized protein family UPF0016 AL538_RS10445 PF01206 Sulfurtransferase TusA AL538_RS10455 PF03466 LysR substrate binding domain AL538_RS10455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS10460 PF08240 Alcohol dehydrogenase GroES-like domain AL538_RS10460 PF00107 Zinc-binding dehydrogenase AL538_RS10465 PF00108 Thiolase, N-terminal domain AL538_RS10465 PF02803 Thiolase, C-terminal domain AL538_RS10470 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AL538_RS10470 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AL538_RS10470 PF00378 Enoyl-CoA hydratase/isomerase AL538_RS10475 PF09186 Domain of unknown function (DUF1949) AL538_RS10475 PF01205 Uncharacterized protein family UPF0029 AL538_RS10480 PF02386 Cation transport protein AL538_RS10485 PF12724 Flavodoxin domain AL538_RS10535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS10535 PF03466 LysR substrate binding domain AL538_RS10540 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AL538_RS10540 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AL538_RS10545 PF04380 Membrane fusogenic activity AL538_RS10555 PF00873 AcrB/AcrD/AcrF family AL538_RS10560 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL538_RS10565 PF08359 YsiA-like protein, C-terminal region AL538_RS10565 PF00440 Bacterial regulatory proteins, tetR family AL538_RS10570 PF00580 UvrD/REP helicase N-terminal domain AL538_RS10570 PF13361 UvrD-like helicase C-terminal domain AL538_RS10575 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AL538_RS10605 PF13419 Haloacid dehalogenase-like hydrolase AL538_RS10615 PF00005 ABC transporter AL538_RS10615 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL538_RS10620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL538_RS10625 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS10630 PF12911 N-terminal TM domain of oligopeptide transport permease C AL538_RS10630 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS10660 PF00069 Protein kinase domain AL538_RS10665 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AL538_RS10665 PF00356 Bacterial regulatory proteins, lacI family AL538_RS10670 PF03466 LysR substrate binding domain AL538_RS10670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS10675 PF00893 Small Multidrug Resistance protein AL538_RS10680 PF00893 Small Multidrug Resistance protein AL538_RS10690 PF00920 Dehydratase family AL538_RS10695 PF01202 Shikimate kinase AL538_RS10700 PF02447 GntP family permease AL538_RS10705 PF01081 KDPG and KHG aldolase AL538_RS10710 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AL538_RS10710 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL538_RS10725 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AL538_RS10735 PF01432 Peptidase family M3 AL538_RS10740 PF01037 Lrp/AsnC ligand binding domain AL538_RS10745 PF00563 EAL domain AL538_RS10745 PF08448 PAS fold AL538_RS10745 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS10750 PF04445 Putative SAM-dependent methyltransferase AL538_RS10765 PF00892 EamA-like transporter family AL538_RS10770 PF00582 Universal stress protein family AL538_RS10780 PF00210 Ferritin-like domain AL538_RS10785 PF10625 Universal stress protein B (UspB) AL538_RS10795 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS10795 PF03707 Bacterial signalling protein N terminal repeat AL538_RS10795 PF00563 EAL domain AL538_RS10805 PF02646 RmuC family AL538_RS10810 PF01209 ubiE/COQ5 methyltransferase family AL538_RS10815 PF02036 SCP-2 sterol transfer family AL538_RS10820 PF03109 ABC1 family AL538_RS10825 PF02416 mttA/Hcf106 family AL538_RS10830 PF02416 mttA/Hcf106 family AL538_RS10835 PF00902 Sec-independent protein translocase protein (TatC) AL538_RS10840 PF01026 TatD related DNase AL538_RS10845 PF00490 Delta-aminolevulinic acid dehydratase AL538_RS10860 PF00476 DNA polymerase family A AL538_RS10860 PF01612 3'-5' exonuclease AL538_RS10860 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AL538_RS10860 PF01367 5'-3' exonuclease, C-terminal SAM fold AL538_RS10870 PF01926 50S ribosome-binding GTPase AL538_RS10875 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AL538_RS10885 PF04220 Der GTPase activator (YihI) AL538_RS10895 PF04055 Radical SAM superfamily AL538_RS10895 PF06969 HemN C-terminal domain AL538_RS10900 PF00962 Adenosine/AMP deaminase AL538_RS10905 PF03707 Bacterial signalling protein N terminal repeat AL538_RS10905 PF00563 EAL domain AL538_RS10905 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS10910 PF00158 Sigma-54 interaction domain AL538_RS10910 PF02954 Bacterial regulatory protein, Fis family AL538_RS10910 PF00072 Response regulator receiver domain AL538_RS10915 PF00989 PAS fold AL538_RS10915 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS10915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS10925 PF03951 Glutamine synthetase, beta-Grasp domain AL538_RS10925 PF00120 Glutamine synthetase, catalytic domain AL538_RS10935 PF00009 Elongation factor Tu GTP binding domain AL538_RS10935 PF03144 Elongation factor Tu domain 2 AL538_RS10935 PF00679 Elongation factor G C-terminus AL538_RS10950 PF03631 Virulence factor BrkB AL538_RS10955 PF02580 D-Tyr-tRNA(Tyr) deacylase AL538_RS10960 PF09500 Putative thioesterase (yiiD_Cterm) AL538_RS10960 PF00583 Acetyltransferase (GNAT) family AL538_RS10970 PF01293 Phosphoenolpyruvate carboxykinase AL538_RS10975 PF01430 Hsp33 protein AL538_RS10980 PF01479 S4 domain AL538_RS10985 PF11356 Type II secretion system protein C AL538_RS10990 PF03958 Bacterial type II/III secretion system short domain AL538_RS10990 PF00263 Bacterial type II and III secretion system protein AL538_RS10995 PF00437 Type II/IV secretion system protein AL538_RS11000 PF00482 Type II secretion system (T2SS), protein F AL538_RS11005 PF07963 Prokaryotic N-terminal methylation motif AL538_RS11005 PF08334 Type II secretion system (T2SS), protein G AL538_RS11010 PF12019 Type II transport protein GspH AL538_RS11015 PF07963 Prokaryotic N-terminal methylation motif AL538_RS11015 PF02501 Type II secretion system (T2SS), protein I AL538_RS11020 PF11612 Type II secretion system (T2SS), protein J AL538_RS11020 PF07963 Prokaryotic N-terminal methylation motif AL538_RS11025 PF03934 Type II secretion system (T2SS), protein K AL538_RS11030 PF05134 Type II secretion system (T2SS), protein L AL538_RS11030 PF12693 GspL periplasmic domain AL538_RS11035 PF04612 Type II secretion system (T2SS), protein M AL538_RS11040 PF01203 Type II secretion system (T2SS), protein N AL538_RS11045 PF00459 Inositol monophosphatase family AL538_RS11050 PF00293 NUDIX domain AL538_RS11055 PF01521 Iron-sulphur cluster biosynthesis AL538_RS11055 PF01106 NifU-like domain AL538_RS11060 PF00156 Phosphoribosyl transferase domain AL538_RS11065 PF00561 alpha/beta hydrolase fold AL538_RS11075 PF17674 HHH domain AL538_RS11075 PF00575 S1 RNA binding domain AL538_RS11075 PF09371 Tex-like protein N-terminal domain AL538_RS11075 PF16921 Tex protein YqgF-like domain AL538_RS11085 PF03449 Transcription elongation factor, N-terminal AL538_RS11085 PF01272 Transcription elongation factor, GreA/GreB, C-term AL538_RS11090 PF00072 Response regulator receiver domain AL538_RS11090 PF00486 Transcriptional regulatory protein, C terminal AL538_RS11095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS11095 PF00672 HAMP domain AL538_RS11095 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS11100 PF00860 Permease family AL538_RS11105 PF00326 Prolyl oligopeptidase family AL538_RS11110 PF17191 RecG wedge domain AL538_RS11110 PF00270 DEAD/DEAH box helicase AL538_RS11110 PF00271 Helicase conserved C-terminal domain AL538_RS11115 PF00588 SpoU rRNA Methylase family AL538_RS11115 PF12105 SpoU, rRNA methylase, C-terminal AL538_RS11120 PF02824 TGS domain AL538_RS11120 PF13291 ACT domain AL538_RS11120 PF04607 Region found in RelA / SpoT proteins AL538_RS11125 PF01192 RNA polymerase Rpb6 AL538_RS11130 PF00625 Guanylate kinase AL538_RS11145 PF02472 Biopolymer transport protein ExbD/TolR AL538_RS11150 PF01618 MotA/TolQ/ExbB proton channel family AL538_RS11165 PF00593 TonB dependent receptor AL538_RS11165 PF07715 TonB-dependent Receptor Plug Domain AL538_RS11175 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS11180 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS11180 PF12911 N-terminal TM domain of oligopeptide transport permease C AL538_RS11185 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL538_RS11190 PF00005 ABC transporter AL538_RS11190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL538_RS11195 PF00005 ABC transporter AL538_RS11195 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL538_RS11210 PF00892 EamA-like transporter family AL538_RS11220 PF00072 Response regulator receiver domain AL538_RS11220 PF00486 Transcriptional regulatory protein, C terminal AL538_RS11225 PF08340 Domain of unknown function (DUF1732) AL538_RS11225 PF03755 YicC-like family, N-terminal region AL538_RS11230 PF03725 3' exoribonuclease family, domain 2 AL538_RS11230 PF01138 3' exoribonuclease family, domain 1 AL538_RS11235 PF00156 Phosphoribosyl transferase domain AL538_RS11240 PF03279 Bacterial lipid A biosynthesis acyltransferase AL538_RS11245 PF00440 Bacterial regulatory proteins, tetR family AL538_RS11250 PF02441 Flavoprotein AL538_RS11250 PF04127 DNA / pantothenate metabolism flavoprotein AL538_RS11260 PF00672 HAMP domain AL538_RS11260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS11260 PF17200 Single Cache domain 2 AL538_RS11265 PF04002 RadC-like JAB domain AL538_RS11270 PF00830 Ribosomal L28 family AL538_RS11275 PF00471 Ribosomal protein L33 AL538_RS11280 PF00884 Sulfatase AL538_RS11290 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AL538_RS11290 PF06827 Zinc finger found in FPG and IleRS AL538_RS11290 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AL538_RS11295 PF01467 Cytidylyltransferase-like AL538_RS11300 PF05686 Glycosyl transferase family 90 AL538_RS11305 PF00535 Glycosyl transferase family 2 AL538_RS11310 PF00535 Glycosyl transferase family 2 AL538_RS11315 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AL538_RS11320 PF01219 Prokaryotic diacylglycerol kinase AL538_RS11330 PF16363 GDP-mannose 4,6 dehydratase AL538_RS11335 PF00483 Nucleotidyl transferase AL538_RS11340 PF05523 WxcM-like, C-terminal AL538_RS11350 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AL538_RS11365 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AL538_RS11370 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AL538_RS11380 PF03279 Bacterial lipid A biosynthesis acyltransferase AL538_RS11385 PF01370 NAD dependent epimerase/dehydratase family AL538_RS11390 PF06082 Exopolysaccharide biosynthesis protein YbjH AL538_RS11430 PF12804 MobA-like NTP transferase domain AL538_RS11440 PF04991 LicD family AL538_RS11450 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AL538_RS11455 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AL538_RS11465 PF00535 Glycosyl transferase family 2 AL538_RS11470 PF00535 Glycosyl transferase family 2 AL538_RS11475 PF02397 Bacterial sugar transferase AL538_RS11480 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AL538_RS11480 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AL538_RS11480 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AL538_RS11485 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AL538_RS11485 PF00753 Metallo-beta-lactamase superfamily AL538_RS11485 PF10996 Beta-Casp domain AL538_RS11490 PF00121 Triosephosphate isomerase AL538_RS11515 PF00455 DeoR C terminal sensor domain AL538_RS11515 PF08220 DeoR-like helix-turn-helix domain AL538_RS11520 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AL538_RS11525 PF06005 Cell division protein ZapB AL538_RS11530 PF03737 Aldolase/RraA AL538_RS11535 PF01040 UbiA prenyltransferase family AL538_RS11540 PF07724 AAA domain (Cdc48 subfamily) AL538_RS11540 PF00004 ATPase family associated with various cellular activities (AAA) AL538_RS11545 PF00227 Proteasome subunit AL538_RS11555 PF00356 Bacterial regulatory proteins, lacI family AL538_RS11560 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AL538_RS11560 PF17764 3′ DNA-binding domain (3′BD) AL538_RS11560 PF00271 Helicase conserved C-terminal domain AL538_RS11560 PF18074 Primosomal protein N C-terminal domain AL538_RS11560 PF00270 DEAD/DEAH box helicase AL538_RS11570 PF01197 Ribosomal protein L31 AL538_RS11575 PF00338 Ribosomal protein S10p/S20e AL538_RS11580 PF00297 Ribosomal protein L3 AL538_RS11585 PF00573 Ribosomal protein L4/L1 family AL538_RS11590 PF00276 Ribosomal protein L23 AL538_RS11595 PF00181 Ribosomal Proteins L2, RNA binding domain AL538_RS11595 PF03947 Ribosomal Proteins L2, C-terminal domain AL538_RS11600 PF00203 Ribosomal protein S19 AL538_RS11605 PF00237 Ribosomal protein L22p/L17e AL538_RS11610 PF00189 Ribosomal protein S3, C-terminal domain AL538_RS11610 PF07650 KH domain AL538_RS11615 PF00252 Ribosomal protein L16p/L10e AL538_RS11620 PF00831 Ribosomal L29 protein AL538_RS11625 PF00366 Ribosomal protein S17 AL538_RS11630 PF00238 Ribosomal protein L14p/L23e AL538_RS11635 PF00467 KOW motif AL538_RS11635 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AL538_RS11640 PF00281 Ribosomal protein L5 AL538_RS11640 PF00673 ribosomal L5P family C-terminus AL538_RS11645 PF00253 Ribosomal protein S14p/S29e AL538_RS11650 PF00410 Ribosomal protein S8 AL538_RS11655 PF00347 Ribosomal protein L6 AL538_RS11660 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AL538_RS11665 PF03719 Ribosomal protein S5, C-terminal domain AL538_RS11665 PF00333 Ribosomal protein S5, N-terminal domain AL538_RS11670 PF00327 Ribosomal protein L30p/L7e AL538_RS11675 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AL538_RS11680 PF00344 SecY translocase AL538_RS11685 PF00444 Ribosomal protein L36 AL538_RS11690 PF00416 Ribosomal protein S13/S18 AL538_RS11695 PF00411 Ribosomal protein S11 AL538_RS11700 PF00163 Ribosomal protein S4/S9 N-terminal domain AL538_RS11700 PF01479 S4 domain AL538_RS11705 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AL538_RS11705 PF01000 RNA polymerase Rpb3/RpoA insert domain AL538_RS11705 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AL538_RS11710 PF01196 Ribosomal protein L17 AL538_RS11720 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AL538_RS11720 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AL538_RS11735 PF13673 Acetyltransferase (GNAT) domain AL538_RS11740 PF00271 Helicase conserved C-terminal domain AL538_RS11740 PF03880 DbpA RNA binding domain AL538_RS11740 PF00270 DEAD/DEAH box helicase AL538_RS11750 PF00149 Calcineurin-like phosphoesterase AL538_RS11750 PF02872 5'-nucleotidase, C-terminal domain AL538_RS11755 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AL538_RS11755 PF14824 Sirohaem biosynthesis protein central AL538_RS11755 PF10414 Sirohaem synthase dimerisation region AL538_RS11760 PF01507 Phosphoadenosine phosphosulfate reductase family AL538_RS11765 PF00009 Elongation factor Tu GTP binding domain AL538_RS11770 PF02080 TrkA-C domain AL538_RS11770 PF03600 Citrate transporter AL538_RS11795 PF00005 ABC transporter AL538_RS11805 PF10795 Protein of unknown function (DUF2607) AL538_RS11810 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) AL538_RS11820 PF01625 Peptide methionine sulfoxide reductase AL538_RS11825 PF17243 POTRA domain TamA domain 1 AL538_RS11825 PF07244 Surface antigen variable number repeat AL538_RS11825 PF01103 Surface antigen AL538_RS11830 PF04357 TamB, inner membrane protein subunit of TAM complex AL538_RS11835 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like AL538_RS11845 PF00719 Inorganic pyrophosphatase AL538_RS11850 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AL538_RS11855 PF01225 Mur ligase family, catalytic domain AL538_RS11855 PF02875 Mur ligase family, glutamate ligase domain AL538_RS11855 PF08245 Mur ligase middle domain AL538_RS11860 PF02441 Flavoprotein AL538_RS11870 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS11875 PF00005 ABC transporter AL538_RS11900 PF01316 Arginine repressor, DNA binding domain AL538_RS11900 PF02863 Arginine repressor, C-terminal domain AL538_RS11905 PF00056 lactate/malate dehydrogenase, NAD binding domain AL538_RS11905 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AL538_RS11915 PF00348 Polyprenyl synthetase AL538_RS11920 PF00829 Ribosomal prokaryotic L21 protein AL538_RS11925 PF01016 Ribosomal L27 protein AL538_RS11930 PF01018 GTP1/OBG AL538_RS11930 PF01926 50S ribosome-binding GTPase AL538_RS11935 PF06738 Putative threonine/serine exporter AL538_RS11940 PF12821 Threonine/Serine exporter, ThrE AL538_RS11945 PF00186 Dihydrofolate reductase AL538_RS11950 PF00149 Calcineurin-like phosphoesterase AL538_RS11955 PF04379 ApaG domain AL538_RS11960 PF00398 Ribosomal RNA adenine dimethylase AL538_RS11965 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AL538_RS11970 PF09312 SurA N-terminal domain AL538_RS11975 PF03968 OstA-like protein AL538_RS11975 PF04453 LPS transport system D AL538_RS11980 PF05099 Tellurite resistance protein TerB AL538_RS11980 PF00226 DnaJ domain AL538_RS11990 PF00694 Aconitase C-terminal domain AL538_RS11995 PF00330 Aconitase family (aconitate hydratase) AL538_RS12000 PF00180 Isocitrate/isopropylmalate dehydrogenase AL538_RS12005 PF00682 HMGL-like AL538_RS12005 PF08502 LeuA allosteric (dimerisation) domain AL538_RS12020 PF01569 PAP2 superfamily AL538_RS12030 PF03466 LysR substrate binding domain AL538_RS12030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS12035 PF00501 AMP-binding enzyme AL538_RS12040 PF00205 Thiamine pyrophosphate enzyme, central domain AL538_RS12040 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AL538_RS12040 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AL538_RS12045 PF10369 Small subunit of acetolactate synthase AL538_RS12050 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS12050 PF17158 Membrane-associated sensor, integral membrane domain AL538_RS12060 PF02887 Pyruvate kinase, alpha/beta domain AL538_RS12060 PF00224 Pyruvate kinase, barrel domain AL538_RS12070 PF08220 DeoR-like helix-turn-helix domain AL538_RS12070 PF00455 DeoR C terminal sensor domain AL538_RS12075 PF01380 SIS domain AL538_RS12090 PF00486 Transcriptional regulatory protein, C terminal AL538_RS12090 PF00072 Response regulator receiver domain AL538_RS12095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS12095 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS12095 PF00672 HAMP domain AL538_RS12100 PF13419 Haloacid dehalogenase-like hydrolase AL538_RS12105 PF05068 Mannitol repressor AL538_RS12110 PF08125 Mannitol dehydrogenase C-terminal domain AL538_RS12110 PF01232 Mannitol dehydrogenase Rossmann domain AL538_RS12115 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AL538_RS12115 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AL538_RS12115 PF02378 Phosphotransferase system, EIIC AL538_RS12145 PF03979 Sigma-70 factor, region 1.1 AL538_RS12145 PF04545 Sigma-70, region 4 AL538_RS12145 PF00140 Sigma-70 factor, region 1.2 AL538_RS12145 PF04546 Sigma-70, non-essential region AL538_RS12145 PF04542 Sigma-70 region 2 AL538_RS12145 PF04539 Sigma-70 region 3 AL538_RS12150 PF10410 DnaB-helicase binding domain of primase AL538_RS12150 PF08275 DNA primase catalytic core, N-terminal domain AL538_RS12150 PF01807 CHC2 zinc finger AL538_RS12150 PF08278 DNA primase DnaG DnaB-binding AL538_RS12155 PF09424 Yqey-like protein AL538_RS12160 PF01165 Ribosomal protein S21 AL538_RS12165 PF00814 Glycoprotease family AL538_RS12170 PF00561 alpha/beta hydrolase fold AL538_RS12175 PF02660 Glycerol-3-phosphate acyltransferase AL538_RS12180 PF02152 Dihydroneopterin aldolase AL538_RS12185 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AL538_RS12190 PF02673 Bacitracin resistance protein BacA AL538_RS12195 PF01966 HD domain AL538_RS12195 PF01743 Poly A polymerase head domain AL538_RS12195 PF12627 Probable RNA and SrmB- binding site of polymerase A AL538_RS12200 PF13401 AAA domain AL538_RS12200 PF01471 Putative peptidoglycan binding domain AL538_RS12210 PF08239 Bacterial SH3 domain AL538_RS12215 PF01384 Phosphate transporter family AL538_RS12220 PF01865 Protein of unknown function DUF47 AL538_RS12225 PF01928 CYTH domain AL538_RS12230 PF07885 Ion channel AL538_RS12235 PF02743 Cache domain AL538_RS12235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS12235 PF00672 HAMP domain AL538_RS12240 PF08335 GlnD PII-uridylyltransferase AL538_RS12240 PF03710 Glutamate-ammonia ligase adenylyltransferase AL538_RS12245 PF01467 Cytidylyltransferase-like AL538_RS12245 PF00294 pfkB family carbohydrate kinase AL538_RS12250 PF02321 Outer membrane efflux protein AL538_RS12255 PF00293 NUDIX domain AL538_RS12260 PF06853 Protein of unknown function (DUF1249) AL538_RS12265 PF00149 Calcineurin-like phosphoesterase AL538_RS12270 PF05728 Uncharacterised protein family (UPF0227) AL538_RS12275 PF01751 Toprim domain AL538_RS12275 PF00986 DNA gyrase B subunit, carboxyl terminus AL538_RS12275 PF00204 DNA gyrase B AL538_RS12275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS12280 PF00521 DNA gyrase/topoisomerase IV, subunit A AL538_RS12280 PF03989 DNA gyrase C-terminal domain, beta-propeller AL538_RS12285 PF13180 PDZ domain AL538_RS12290 PF00595 PDZ domain AL538_RS12300 PF06295 Protein of unknown function (DUF1043) AL538_RS12310 PF03969 AFG1-like ATPase AL538_RS12320 PF00572 Ribosomal protein L13 AL538_RS12325 PF00380 Ribosomal protein S9/S16 AL538_RS12330 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AL538_RS12330 PF00355 Rieske [2Fe-2S] domain AL538_RS12335 PF00033 Cytochrome b/b6/petB AL538_RS12335 PF00032 Cytochrome b(C-terminal)/b6/petD AL538_RS12340 PF02167 Cytochrome C1 family AL538_RS12345 PF02798 Glutathione S-transferase, N-terminal domain AL538_RS12345 PF00043 Glutathione S-transferase, C-terminal domain AL538_RS12350 PF04386 Stringent starvation protein B AL538_RS12355 PF04972 BON domain AL538_RS12360 PF13580 SIS domain AL538_RS12365 PF02021 Uncharacterised protein family UPF0102 AL538_RS12370 PF04348 LppC putative lipoprotein AL538_RS12375 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AL538_RS12390 PF01795 MraW methylase family AL538_RS12395 PF04999 Cell division protein FtsL AL538_RS12400 PF00905 Penicillin binding protein transpeptidase domain AL538_RS12400 PF03717 Penicillin-binding Protein dimerisation domain AL538_RS12405 PF08245 Mur ligase middle domain AL538_RS12405 PF02875 Mur ligase family, glutamate ligase domain AL538_RS12405 PF01225 Mur ligase family, catalytic domain AL538_RS12410 PF08245 Mur ligase middle domain AL538_RS12410 PF01225 Mur ligase family, catalytic domain AL538_RS12410 PF02875 Mur ligase family, glutamate ligase domain AL538_RS12415 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AL538_RS12415 PF00953 Glycosyl transferase family 4 AL538_RS12420 PF02875 Mur ligase family, glutamate ligase domain AL538_RS12420 PF08245 Mur ligase middle domain AL538_RS12425 PF01098 Cell cycle protein AL538_RS12430 PF03033 Glycosyltransferase family 28 N-terminal domain AL538_RS12430 PF04101 Glycosyltransferase family 28 C-terminal domain AL538_RS12435 PF08245 Mur ligase middle domain AL538_RS12435 PF02875 Mur ligase family, glutamate ligase domain AL538_RS12435 PF01225 Mur ligase family, catalytic domain AL538_RS12440 PF03799 Cell division protein FtsQ AL538_RS12440 PF08478 POTRA domain, FtsQ-type AL538_RS12445 PF02491 SHS2 domain inserted in FTSA AL538_RS12450 PF12327 FtsZ family, C-terminal domain AL538_RS12450 PF00091 Tubulin/FtsZ family, GTPase domain AL538_RS12455 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AL538_RS12460 PF07516 SecA Wing and Scaffold domain AL538_RS12460 PF01043 SecA preprotein cross-linking domain AL538_RS12460 PF07517 SecA DEAD-like domain AL538_RS12460 PF02810 SEC-C motif AL538_RS12465 PF00293 NUDIX domain AL538_RS12470 PF01113 Dihydrodipicolinate reductase, N-terminus AL538_RS12470 PF05173 Dihydrodipicolinate reductase, C-terminus AL538_RS12475 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AL538_RS12475 PF00117 Glutamine amidotransferase class-I AL538_RS12480 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AL538_RS12480 PF02142 MGS-like domain AL538_RS12480 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AL538_RS12500 PF01925 Sulfite exporter TauE/SafE AL538_RS12505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS12505 PF03466 LysR substrate binding domain AL538_RS12510 PF03458 UPF0126 domain AL538_RS12515 PF01497 Periplasmic binding protein AL538_RS12525 PF01048 Phosphorylase superfamily AL538_RS12535 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL538_RS12535 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AL538_RS12540 PF04898 Glutamate synthase central domain AL538_RS12540 PF00310 Glutamine amidotransferases class-II AL538_RS12540 PF01645 Conserved region in glutamate synthase AL538_RS12540 PF01493 GXGXG motif AL538_RS12545 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL538_RS12545 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AL538_RS12550 PF01645 Conserved region in glutamate synthase AL538_RS12550 PF01493 GXGXG motif AL538_RS12550 PF00310 Glutamine amidotransferases class-II AL538_RS12550 PF04898 Glutamate synthase central domain AL538_RS12555 PF16199 Radical_SAM C-terminal domain AL538_RS12555 PF04055 Radical SAM superfamily AL538_RS12560 PF01590 GAF domain AL538_RS12560 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS12560 PF00360 Phytochrome region AL538_RS12560 PF00563 EAL domain AL538_RS12570 PF00072 Response regulator receiver domain AL538_RS12570 PF00989 PAS fold AL538_RS12570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS12570 PF01627 Hpt domain AL538_RS12570 PF18415 Histidine kinase receptor ArcB trans-membrane domain AL538_RS12570 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS12580 PF00486 Transcriptional regulatory protein, C terminal AL538_RS12580 PF00072 Response regulator receiver domain AL538_RS12595 PF03737 Aldolase/RraA AL538_RS12605 PF03447 Homoserine dehydrogenase, NAD binding domain AL538_RS12605 PF00742 Homoserine dehydrogenase AL538_RS12605 PF01842 ACT domain AL538_RS12605 PF00696 Amino acid kinase family AL538_RS12605 PF13840 ACT domain AL538_RS12610 PF00288 GHMP kinases N terminal domain AL538_RS12610 PF08544 GHMP kinases C terminal AL538_RS12615 PF14821 Threonine synthase N terminus AL538_RS12615 PF00291 Pyridoxal-phosphate dependent enzyme AL538_RS12620 PF03358 NADPH-dependent FMN reductase AL538_RS12625 PF01228 Glycine radical AL538_RS12630 PF01261 Xylose isomerase-like TIM barrel AL538_RS12640 PF03167 Uracil DNA glycosylase superfamily AL538_RS12655 PF01235 Sodium:alanine symporter family AL538_RS12660 PF03883 Peroxide stress protein YaaA AL538_RS12670 PF00271 Helicase conserved C-terminal domain AL538_RS12670 PF00270 DEAD/DEAH box helicase AL538_RS12675 PF05175 Methyltransferase small domain AL538_RS12680 PF05525 Branched-chain amino acid transport protein AL538_RS12685 PF00258 Flavodoxin AL538_RS12690 PF02899 Phage integrase, N-terminal SAM-like domain AL538_RS12690 PF00589 Phage integrase family AL538_RS12695 PF13098 Thioredoxin-like domain AL538_RS12695 PF10411 Disulfide bond isomerase protein N-terminus AL538_RS12700 PF17768 RecJ OB domain AL538_RS12700 PF02272 DHHA1 domain AL538_RS12700 PF01368 DHH family AL538_RS12710 PF00152 tRNA synthetases class II (D, K and N) AL538_RS12710 PF01336 OB-fold nucleic acid binding domain AL538_RS12715 PF00158 Sigma-54 interaction domain AL538_RS12715 PF00072 Response regulator receiver domain AL538_RS12715 PF02954 Bacterial regulatory protein, Fis family AL538_RS12725 PF00248 Aldo/keto reductase family AL538_RS12735 PF02976 DNA mismatch repair enzyme MutH AL538_RS12740 PF00293 NUDIX domain AL538_RS12745 PF01590 GAF domain AL538_RS12745 PF05524 PEP-utilising enzyme, N-terminal AL538_RS12745 PF00391 PEP-utilising enzyme, mobile domain AL538_RS12745 PF02896 PEP-utilising enzyme, TIM barrel domain AL538_RS12750 PF01925 Sulfite exporter TauE/SafE AL538_RS12755 PF01790 Prolipoprotein diacylglyceryl transferase AL538_RS12760 PF00303 Thymidylate synthase AL538_RS12765 PF02690 Na+/Pi-cotransporter AL538_RS12770 PF03466 LysR substrate binding domain AL538_RS12770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS12775 PF01022 Bacterial regulatory protein, arsR family AL538_RS12780 PF01649 Ribosomal protein S20 AL538_RS12785 PF03023 Lipid II flippase MurJ AL538_RS12790 PF01687 Riboflavin kinase AL538_RS12790 PF06574 FAD synthetase AL538_RS12795 PF06827 Zinc finger found in FPG and IleRS AL538_RS12795 PF00133 tRNA synthetases class I (I, L, M and V) AL538_RS12795 PF08264 Anticodon-binding domain of tRNA AL538_RS12800 PF01252 Signal peptidase (SPase) II AL538_RS12805 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AL538_RS12810 PF02401 LytB protein AL538_RS12815 PF04397 LytTr DNA-binding domain AL538_RS12815 PF00072 Response regulator receiver domain AL538_RS12820 PF07694 5TMR of 5TMR-LYT AL538_RS12820 PF06580 Histidine kinase AL538_RS12825 PF02554 Carbon starvation protein CstA AL538_RS12840 PF01380 SIS domain AL538_RS12845 PF03702 Anhydro-N-acetylmuramic acid kinase AL538_RS12850 PF00933 Glycosyl hydrolase family 3 N terminal domain AL538_RS12855 PF00793 DAHP synthetase I family AL538_RS12860 PF02153 Prephenate dehydrogenase AL538_RS12860 PF01817 Chorismate mutase type II AL538_RS12865 PF01551 Peptidase family M23 AL538_RS12865 PF04225 Opacity-associated protein A LysM-like domain AL538_RS12870 PF07238 PilZ domain AL538_RS12875 PF00005 ABC transporter AL538_RS12875 PF12848 ABC transporter AL538_RS12880 PF01464 Transglycosylase SLT domain AL538_RS12880 PF14718 Soluble lytic murein transglycosylase L domain AL538_RS12885 PF01371 Trp repressor protein AL538_RS12890 PF01931 Protein of unknown function DUF84 AL538_RS12895 PF00800 Prephenate dehydratase AL538_RS12895 PF01817 Chorismate mutase type II AL538_RS12900 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AL538_RS12905 PF01464 Transglycosylase SLT domain AL538_RS12910 PF13525 Outer membrane lipoprotein AL538_RS12915 PF00849 RNA pseudouridylate synthase AL538_RS12915 PF01479 S4 domain AL538_RS12920 PF02578 Multi-copper polyphenol oxidoreductase laccase AL538_RS12925 PF00004 ATPase family associated with various cellular activities (AAA) AL538_RS12925 PF17871 AAA lid domain AL538_RS12925 PF02861 Clp amino terminal domain, pathogenicity island component AL538_RS12925 PF10431 C-terminal, D2-small domain, of ClpB protein AL538_RS12925 PF07724 AAA domain (Cdc48 subfamily) AL538_RS12980 PF03411 Penicillin-insensitive murein endopeptidase AL538_RS12990 PF00037 4Fe-4S binding domain AL538_RS12995 PF01136 Peptidase family U32 AL538_RS12995 PF16325 Peptidase family U32 C-terminal domain AL538_RS13000 PF04381 Putative exonuclease, RdgC AL538_RS13005 PF00072 Response regulator receiver domain AL538_RS13005 PF00486 Transcriptional regulatory protein, C terminal AL538_RS13010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS13010 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS13010 PF00989 PAS fold AL538_RS13010 PF11808 Phosphate regulon sensor protein PhoR AL538_RS13015 PF12849 PBP superfamily domain AL538_RS13020 PF02541 Ppx/GppA phosphatase family AL538_RS13025 PF13089 Polyphosphate kinase N-terminal domain AL538_RS13025 PF02503 Polyphosphate kinase middle domain AL538_RS13025 PF17941 Polyphosphate kinase C-terminal domain 1 AL538_RS13025 PF13090 Polyphosphate kinase C-terminal domain 2 AL538_RS13030 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS13035 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS13040 PF00005 ABC transporter AL538_RS13045 PF01895 PhoU domain AL538_RS13060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS13060 PF03466 LysR substrate binding domain AL538_RS13065 PF03976 Polyphosphate kinase 2 (PPK2) AL538_RS13070 PF03932 CutC family AL538_RS13075 PF00578 AhpC/TSA family AL538_RS13075 PF10417 C-terminal domain of 1-Cys peroxiredoxin AL538_RS13080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS13080 PF03466 LysR substrate binding domain AL538_RS13090 PF01274 Malate synthase AL538_RS13095 PF00463 Isocitrate lyase family AL538_RS13100 PF00571 CBS domain AL538_RS13115 PF02547 Queuosine biosynthesis protein AL538_RS13120 PF01702 Queuine tRNA-ribosyltransferase AL538_RS13125 PF02699 Preprotein translocase subunit AL538_RS13130 PF13721 SecD export protein N-terminal TM region AL538_RS13130 PF02355 Protein export membrane protein AL538_RS13130 PF07549 SecD/SecF GG Motif AL538_RS13135 PF02355 Protein export membrane protein AL538_RS13135 PF07549 SecD/SecF GG Motif AL538_RS13150 PF00459 Inositol monophosphatase family AL538_RS13155 PF00588 SpoU rRNA Methylase family AL538_RS13160 PF02082 Transcriptional regulator AL538_RS13165 PF00266 Aminotransferase class-V AL538_RS13170 PF01592 NifU-like N terminal domain AL538_RS13175 PF01521 Iron-sulphur cluster biosynthesis AL538_RS13180 PF07743 HSCB C-terminal oligomerisation domain AL538_RS13180 PF00226 DnaJ domain AL538_RS13185 PF00012 Hsp70 protein AL538_RS13190 PF00111 2Fe-2S iron-sulfur cluster binding domain AL538_RS13195 PF04384 Iron-sulphur cluster assembly AL538_RS13200 PF00883 Cytosol aminopeptidase family, catalytic domain AL538_RS13200 PF12404 Peptidase AL538_RS13205 PF00334 Nucleoside diphosphate kinase AL538_RS13210 PF04055 Radical SAM superfamily AL538_RS13215 PF13464 Domain of unknown function (DUF4115) AL538_RS13220 PF04551 GcpE protein AL538_RS13225 PF13393 Histidyl-tRNA synthetase AL538_RS13225 PF03129 Anticodon binding domain AL538_RS13230 PF09976 Tetratricopeptide repeat-like domain AL538_RS13235 PF13360 PQQ-like domain AL538_RS13240 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AL538_RS13240 PF01926 50S ribosome-binding GTPase AL538_RS13250 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS13250 PF13185 GAF domain AL538_RS13260 PF02601 Exonuclease VII, large subunit AL538_RS13260 PF13742 OB-fold nucleic acid binding domain AL538_RS13265 PF00571 CBS domain AL538_RS13265 PF00478 IMP dehydrogenase / GMP reductase domain AL538_RS13270 PF00117 Glutamine amidotransferase class-I AL538_RS13270 PF02540 NAD synthase AL538_RS13270 PF00958 GMP synthase C terminal domain AL538_RS13275 PF03553 Na+/H+ antiporter family AL538_RS13280 PF06483 Chitinase C AL538_RS13280 PF00704 Glycosyl hydrolases family 18 AL538_RS13285 PF01184 GPR1/FUN34/yaaH family AL538_RS13290 PF01235 Sodium:alanine symporter family AL538_RS13295 PF01266 FAD dependent oxidoreductase AL538_RS13300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS13300 PF03466 LysR substrate binding domain AL538_RS13315 PF01053 Cys/Met metabolism PLP-dependent enzyme AL538_RS13320 PF01521 Iron-sulphur cluster biosynthesis AL538_RS13325 PF01458 Uncharacterized protein family (UPF0051) AL538_RS13330 PF00005 ABC transporter AL538_RS13335 PF01458 Uncharacterized protein family (UPF0051) AL538_RS13340 PF00266 Aminotransferase class-V AL538_RS13345 PF02657 Fe-S metabolism associated domain AL538_RS13355 PF00202 Aminotransferase class-III AL538_RS13375 PF12805 FUSC-like inner membrane protein yccS AL538_RS13380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS13380 PF03466 LysR substrate binding domain AL538_RS13440 PF04002 RadC-like JAB domain AL538_RS13500 PF00589 Phage integrase family AL538_RS13500 PF13356 Arm DNA-binding domain AL538_RS13510 PF01668 SmpB protein AL538_RS13515 PF03364 Polyketide cyclase / dehydrase and lipid transport AL538_RS13520 PF03658 RnfH family Ubiquitin AL538_RS13525 PF04355 SmpA / OmlA family AL538_RS13530 PF02463 RecF/RecN/SMC N terminal domain AL538_RS13540 PF01513 ATP-NAD kinase AL538_RS13545 PF01025 GrpE AL538_RS13550 PF00375 Sodium:dicarboxylate symporter family AL538_RS13560 PF00012 Hsp70 protein AL538_RS13565 PF00684 DnaJ central domain AL538_RS13565 PF00226 DnaJ domain AL538_RS13565 PF01556 DnaJ C terminal domain AL538_RS13570 PF07963 Prokaryotic N-terminal methylation motif AL538_RS13570 PF00114 Pilin (bacterial filament) AL538_RS13575 PF00114 Pilin (bacterial filament) AL538_RS13575 PF07963 Prokaryotic N-terminal methylation motif AL538_RS13595 PF03806 AbgT putative transporter family AL538_RS13600 PF14437 MafB19-like deaminase AL538_RS13610 PF01464 Transglycosylase SLT domain AL538_RS13610 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL538_RS13615 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AL538_RS13615 PF02769 AIR synthase related protein, C-terminal domain AL538_RS13615 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AL538_RS13645 PF01546 Peptidase family M20/M25/M40 AL538_RS13645 PF07687 Peptidase dimerisation domain AL538_RS13650 PF00860 Permease family AL538_RS13655 PF00156 Phosphoribosyl transferase domain AL538_RS13660 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) AL538_RS13665 PF07417 Sigma factor-binding transcriptional regulator Crl AL538_RS13670 PF01472 PUA domain AL538_RS13670 PF00696 Amino acid kinase family AL538_RS13675 PF00171 Aldehyde dehydrogenase family AL538_RS13680 PF03477 ATP cone domain AL538_RS13685 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AL538_RS13685 PF01872 RibD C-terminal domain AL538_RS13690 PF00677 Lumazine binding domain AL538_RS13695 PF00925 GTP cyclohydrolase II AL538_RS13695 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AL538_RS13700 PF00885 6,7-dimethyl-8-ribityllumazine synthase AL538_RS13705 PF01029 NusB family AL538_RS13710 PF02769 AIR synthase related protein, C-terminal domain AL538_RS13710 PF00586 AIR synthase related protein, N-terminal domain AL538_RS13715 PF04608 Phosphatidylglycerophosphatase A AL538_RS13720 PF02780 Transketolase, C-terminal domain AL538_RS13720 PF02779 Transketolase, pyrimidine binding domain AL538_RS13720 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AL538_RS13725 PF00348 Polyprenyl synthetase AL538_RS13730 PF02609 Exonuclease VII small subunit AL538_RS13735 PF01618 MotA/TolQ/ExbB proton channel family AL538_RS13740 PF00691 OmpA family AL538_RS13740 PF13677 Membrane MotB of proton-channel complex MotA/MotB AL538_RS13740 PF13677 Membrane MotB of proton-channel complex MotA/MotB AL538_RS13740 PF00691 OmpA family AL538_RS13745 PF02568 Thiamine biosynthesis protein (ThiI) AL538_RS13745 PF02926 THUMP domain AL538_RS13750 PF03466 LysR substrate binding domain AL538_RS13750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS13760 PF04241 Protein of unknown function (DUF423) AL538_RS13765 PF01728 FtsJ-like methyltransferase AL538_RS13765 PF18125 RlmM ferredoxin-like domain AL538_RS13770 PF01223 DNA/RNA non-specific endonuclease AL538_RS13775 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AL538_RS13775 PF01367 5'-3' exonuclease, C-terminal SAM fold AL538_RS13780 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases AL538_RS13780 PF03641 Possible lysine decarboxylase AL538_RS13780 PF11892 Domain of unknown function (DUF3412) AL538_RS13785 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS13795 PF14489 QueF-like protein AL538_RS13795 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AL538_RS13800 PF07348 Syd protein (SUKH-2) AL538_RS13805 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) AL538_RS13810 PF00149 Calcineurin-like phosphoesterase AL538_RS13810 PF02872 5'-nucleotidase, C-terminal domain AL538_RS13820 PF03180 NLPA lipoprotein AL538_RS13825 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS13830 PF00005 ABC transporter AL538_RS13830 PF09383 NIL domain AL538_RS13840 PF00356 Bacterial regulatory proteins, lacI family AL538_RS13845 PF02378 Phosphotransferase system, EIIC AL538_RS13845 PF00367 phosphotransferase system, EIIB AL538_RS13850 PF00128 Alpha amylase, catalytic domain AL538_RS13850 PF16657 Maltogenic Amylase, C-terminal domain AL538_RS13865 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AL538_RS13865 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AL538_RS13870 PF00464 Serine hydroxymethyltransferase AL538_RS13875 PF04055 Radical SAM superfamily AL538_RS13875 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AL538_RS13880 PF03099 Biotin/lipoate A/B protein ligase family AL538_RS13885 PF04359 Protein of unknown function (DUF493) AL538_RS13890 PF07943 Penicillin-binding protein 5, C-terminal domain AL538_RS13890 PF00768 D-alanyl-D-alanine carboxypeptidase AL538_RS13895 PF05036 Sporulation related domain AL538_RS13895 PF03330 Lytic transglycolase AL538_RS13900 PF01098 Cell cycle protein AL538_RS13905 PF03717 Penicillin-binding Protein dimerisation domain AL538_RS13905 PF00905 Penicillin binding protein transpeptidase domain AL538_RS13910 PF02590 Predicted SPOUT methyltransferase AL538_RS13920 PF14840 Processivity clamp loader gamma complex DNA pol III C-term AL538_RS13920 PF06144 DNA polymerase III, delta subunit AL538_RS13925 PF04390 Lipopolysaccharide-assembly AL538_RS13930 PF08264 Anticodon-binding domain of tRNA AL538_RS13930 PF00133 tRNA synthetases class I (I, L, M and V) AL538_RS13930 PF13603 Leucyl-tRNA synthetase, Domain 2 AL538_RS13935 PF07295 Zinc-ribbon containing domain AL538_RS13940 PF00795 Carbon-nitrogen hydrolase AL538_RS13945 PF00571 CBS domain AL538_RS13945 PF03471 Transporter associated domain AL538_RS13950 PF02130 Uncharacterized protein family UPF0054 AL538_RS13955 PF02562 PhoH-like protein AL538_RS13960 PF04055 Radical SAM superfamily AL538_RS13960 PF01938 TRAM domain AL538_RS13960 PF00919 Uncharacterized protein family UPF0004 AL538_RS13970 PF01494 FAD binding domain AL538_RS14085 PF06071 Protein of unknown function (DUF933) AL538_RS14085 PF01926 50S ribosome-binding GTPase AL538_RS14090 PF01195 Peptidyl-tRNA hydrolase AL538_RS14095 PF14572 Phosphoribosyl synthetase-associated domain AL538_RS14095 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AL538_RS14100 PF00288 GHMP kinases N terminal domain AL538_RS14100 PF08544 GHMP kinases C terminal AL538_RS14105 PF03550 Outer membrane lipoprotein LolB AL538_RS14110 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AL538_RS14110 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AL538_RS14110 PF01488 Shikimate / quinate 5-dehydrogenase AL538_RS14115 PF00472 RF-1 domain AL538_RS14115 PF03462 PCRF domain AL538_RS14120 PF13847 Methyltransferase domain AL538_RS14120 PF17827 PrmC N-terminal domain AL538_RS14125 PF04247 Invasion gene expression up-regulator, SirB AL538_RS14130 PF13369 Transglutaminase-like superfamily AL538_RS14135 PF00793 DAHP synthetase I family AL538_RS14140 PF02872 5'-nucleotidase, C-terminal domain AL538_RS14140 PF00149 Calcineurin-like phosphoesterase AL538_RS14145 PF04073 Aminoacyl-tRNA editing domain AL538_RS14150 PF01479 S4 domain AL538_RS14150 PF00849 RNA pseudouridylate synthase AL538_RS14155 PF01713 Smr domain AL538_RS14185 PF02838 Glycosyl hydrolase family 20, domain 2 AL538_RS14185 PF00728 Glycosyl hydrolase family 20, catalytic domain AL538_RS14185 PF03173 Putative carbohydrate binding domain AL538_RS14185 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain AL538_RS14200 PF00403 Heavy-metal-associated domain AL538_RS14210 PF13609 Gram-negative porin AL538_RS14215 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) AL538_RS14220 PF00749 tRNA synthetases class I (E and Q), catalytic domain AL538_RS14225 PF01389 OmpA-like transmembrane domain AL538_RS14225 PF00691 OmpA family AL538_RS14280 PF00072 Response regulator receiver domain AL538_RS14280 PF01584 CheW-like domain AL538_RS14285 PF03705 CheR methyltransferase, all-alpha domain AL538_RS14285 PF01739 CheR methyltransferase, SAM binding domain AL538_RS14290 PF00460 Flagella basal body rod protein AL538_RS14295 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL538_RS14295 PF00460 Flagella basal body rod protein AL538_RS14300 PF13861 FlgD Tudor-like domain AL538_RS14300 PF13860 FlgD Ig-like domain AL538_RS14300 PF03963 Flagellar hook capping protein - N-terminal region AL538_RS14305 PF00460 Flagella basal body rod protein AL538_RS14305 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL538_RS14305 PF07559 Flagellar basal body protein FlaE AL538_RS14315 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL538_RS14315 PF00460 Flagella basal body rod protein AL538_RS14320 PF00460 Flagella basal body rod protein AL538_RS14320 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL538_RS14325 PF02107 Flagellar L-ring protein AL538_RS14330 PF02119 Flagellar P-ring protein AL538_RS14335 PF10135 Rod binding protein AL538_RS14335 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AL538_RS14340 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL538_RS14340 PF07196 Flagellin hook IN motif AL538_RS14350 PF00700 Bacterial flagellin C-terminal helical region AL538_RS14350 PF07196 Flagellin hook IN motif AL538_RS14350 PF00669 Bacterial flagellin N-terminal helical region AL538_RS14355 PF00669 Bacterial flagellin N-terminal helical region AL538_RS14355 PF00700 Bacterial flagellin C-terminal helical region AL538_RS14355 PF07196 Flagellin hook IN motif AL538_RS14360 PF00669 Bacterial flagellin N-terminal helical region AL538_RS14360 PF07196 Flagellin hook IN motif AL538_RS14360 PF00700 Bacterial flagellin C-terminal helical region AL538_RS14365 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AL538_RS14370 PF05524 PEP-utilising enzyme, N-terminal AL538_RS14370 PF00391 PEP-utilising enzyme, mobile domain AL538_RS14370 PF02896 PEP-utilising enzyme, TIM barrel domain AL538_RS14375 PF00381 PTS HPr component phosphorylation site AL538_RS14385 PF00291 Pyridoxal-phosphate dependent enzyme AL538_RS14395 PF04354 ZipA, C-terminal FtsZ-binding domain AL538_RS14400 PF03120 NAD-dependent DNA ligase OB-fold domain AL538_RS14400 PF00533 BRCA1 C Terminus (BRCT) domain AL538_RS14400 PF12826 Helix-hairpin-helix motif AL538_RS14400 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AL538_RS14400 PF01653 NAD-dependent DNA ligase adenylation domain AL538_RS14405 PF03573 outer membrane porin, OprD family AL538_RS14425 PF01145 SPFH domain / Band 7 family AL538_RS14425 PF16200 C-terminal region of band_7 AL538_RS14430 PF00085 Thioredoxin AL538_RS14440 PF00106 short chain dehydrogenase AL538_RS14445 PF08338 Domain of unknown function (DUF1731) AL538_RS14445 PF01370 NAD dependent epimerase/dehydratase family AL538_RS14450 PF07556 Protein of unknown function (DUF1538) AL538_RS14455 PF07556 Protein of unknown function (DUF1538) AL538_RS14475 PF12850 Calcineurin-like phosphoesterase superfamily domain AL538_RS14490 PF17323 Trans-membrane regulatory protein ToxS AL538_RS14495 PF00486 Transcriptional regulatory protein, C terminal AL538_RS14500 PF00183 Hsp90 protein AL538_RS14500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS14505 PF05191 Adenylate kinase, active site lid AL538_RS14510 PF00762 Ferrochelatase AL538_RS14515 PF00854 POT family AL538_RS14520 PF02357 Transcription termination factor nusG AL538_RS14525 PF00733 Asparagine synthase AL538_RS14525 PF13537 Glutamine amidotransferase domain AL538_RS14530 PF02254 TrkA-N domain AL538_RS14530 PF00999 Sodium/hydrogen exchanger family AL538_RS14535 PF01047 MarR family AL538_RS14535 PF00480 ROK family AL538_RS14540 PF01979 Amidohydrolase family AL538_RS14550 PF00367 phosphotransferase system, EIIB AL538_RS14550 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AL538_RS14550 PF02378 Phosphotransferase system, EIIC AL538_RS14555 PF00749 tRNA synthetases class I (E and Q), catalytic domain AL538_RS14555 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AL538_RS14560 PF07963 Prokaryotic N-terminal methylation motif AL538_RS14565 PF01475 Ferric uptake regulator family AL538_RS14575 PF00258 Flavodoxin AL538_RS14585 PF00561 alpha/beta hydrolase fold AL538_RS14590 PF17206 SeqA protein N-terminal domain AL538_RS14590 PF03925 SeqA protein C-terminal domain AL538_RS14595 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AL538_RS14595 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AL538_RS14595 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AL538_RS14595 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AL538_RS14610 PF01784 NIF3 (NGG1p interacting factor 3) AL538_RS14615 PF00285 Citrate synthase, C-terminal domain AL538_RS14620 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AL538_RS14625 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AL538_RS14630 PF02910 Fumarate reductase flavoprotein C-term AL538_RS14630 PF00890 FAD binding domain AL538_RS14635 PF13085 2Fe-2S iron-sulfur cluster binding domain AL538_RS14640 PF02779 Transketolase, pyrimidine binding domain AL538_RS14640 PF16078 2-oxoglutarate dehydrogenase N-terminus AL538_RS14640 PF16870 2-oxoglutarate dehydrogenase C-terminal AL538_RS14640 PF00676 Dehydrogenase E1 component AL538_RS14645 PF02817 e3 binding domain AL538_RS14645 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AL538_RS14645 PF00364 Biotin-requiring enzyme AL538_RS14650 PF00549 CoA-ligase AL538_RS14650 PF08442 ATP-grasp domain AL538_RS14655 PF00549 CoA-ligase AL538_RS14655 PF02629 CoA binding domain AL538_RS14660 PF00950 ABC 3 transport family AL538_RS14665 PF00005 ABC transporter AL538_RS14670 PF01297 Zinc-uptake complex component A periplasmic AL538_RS14675 PF12833 Helix-turn-helix domain AL538_RS14675 PF02311 AraC-like ligand binding domain AL538_RS14680 PF04023 FeoA domain AL538_RS14685 PF17910 FeoB cytosolic helical domain AL538_RS14685 PF02421 Ferrous iron transport protein B AL538_RS14685 PF07670 Nucleoside recognition AL538_RS14685 PF07664 Ferrous iron transport protein B C terminus AL538_RS14705 PF00750 tRNA synthetases class I (R) AL538_RS14705 PF05746 DALR anticodon binding domain AL538_RS14705 PF03485 Arginyl tRNA synthetase N terminal domain AL538_RS14715 PF06185 YecM protein AL538_RS14720 PF01842 ACT domain AL538_RS14720 PF00551 Formyl transferase AL538_RS14725 PF04851 Type III restriction enzyme, res subunit AL538_RS14725 PF13307 Helicase C-terminal domain AL538_RS14730 PF00814 Glycoprotease family AL538_RS14740 PF03843 Outer membrane lipoprotein Slp family AL538_RS14745 PF00561 alpha/beta hydrolase fold AL538_RS14750 PF00501 AMP-binding enzyme AL538_RS14750 PF13193 AMP-binding enzyme C-terminal domain AL538_RS14755 PF01612 3'-5' exonuclease AL538_RS14755 PF00570 HRDC domain AL538_RS14760 PF03776 Septum formation topological specificity factor MinE AL538_RS14765 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AL538_RS14770 PF03775 Septum formation inhibitor MinC, C-terminal domain AL538_RS14770 PF05209 Septum formation inhibitor MinC, N-terminal domain AL538_RS14775 PF05166 YcgL domain AL538_RS14780 PF13406 Transglycosylase SLT domain AL538_RS14785 PF03466 LysR substrate binding domain AL538_RS14785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS14790 PF07662 Na+ dependent nucleoside transporter C-terminus AL538_RS14790 PF01773 Na+ dependent nucleoside transporter N-terminus AL538_RS14790 PF07670 Nucleoside recognition AL538_RS14795 PF00145 C-5 cytosine-specific DNA methylase AL538_RS14805 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AL538_RS14805 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AL538_RS14815 PF02899 Phage integrase, N-terminal SAM-like domain AL538_RS14815 PF00589 Phage integrase family AL538_RS14830 PF01764 Lipase (class 3) AL538_RS14850 PF04471 Restriction endonuclease AL538_RS14850 PF14338 Mrr N-terminal domain AL538_RS14855 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AL538_RS14855 PF12008 Type I restriction and modification enzyme - subunit R C terminal AL538_RS14855 PF18766 SWI2/SNF2 ATPase AL538_RS14865 PF02384 N-6 DNA Methylase AL538_RS14865 PF12161 HsdM N-terminal domain AL538_RS14915 PF00109 Beta-ketoacyl synthase, N-terminal domain AL538_RS14915 PF02801 Beta-ketoacyl synthase, C-terminal domain AL538_RS14925 PF07977 FabA-like domain AL538_RS14930 PF00109 Beta-ketoacyl synthase, N-terminal domain AL538_RS14930 PF02801 Beta-ketoacyl synthase, C-terminal domain AL538_RS14955 PF00221 Aromatic amino acid lyase AL538_RS14960 PF00535 Glycosyl transferase family 2 AL538_RS14965 PF07977 FabA-like domain AL538_RS14970 PF00501 AMP-binding enzyme AL538_RS14970 PF13193 AMP-binding enzyme C-terminal domain AL538_RS14980 PF00550 Phosphopantetheine attachment site AL538_RS14985 PF00550 Phosphopantetheine attachment site AL538_RS15010 PF04820 Tryptophan halogenase AL538_RS15035 PF00425 chorismate binding enzyme AL538_RS15040 PF13193 AMP-binding enzyme C-terminal domain AL538_RS15040 PF00501 AMP-binding enzyme AL538_RS15045 PF00857 Isochorismatase family AL538_RS15045 PF00550 Phosphopantetheine attachment site AL538_RS15050 PF13193 AMP-binding enzyme C-terminal domain AL538_RS15050 PF00975 Thioesterase domain AL538_RS15050 PF00550 Phosphopantetheine attachment site AL538_RS15050 PF00668 Condensation domain AL538_RS15050 PF13193 AMP-binding enzyme C-terminal domain AL538_RS15050 PF00501 AMP-binding enzyme AL538_RS15050 PF00501 AMP-binding enzyme AL538_RS15050 PF00975 Thioesterase domain AL538_RS15050 PF00668 Condensation domain AL538_RS15050 PF00550 Phosphopantetheine attachment site AL538_RS15065 PF00593 TonB dependent receptor AL538_RS15065 PF07715 TonB-dependent Receptor Plug Domain AL538_RS15070 PF00571 CBS domain AL538_RS15070 PF03471 Transporter associated domain AL538_RS15070 PF01595 Cyclin M transmembrane N-terminal domain AL538_RS15075 PF00270 DEAD/DEAH box helicase AL538_RS15075 PF00271 Helicase conserved C-terminal domain AL538_RS15080 PF02254 TrkA-N domain AL538_RS15080 PF02080 TrkA-C domain AL538_RS15085 PF02386 Cation transport protein AL538_RS15095 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AL538_RS15100 PF03480 Bacterial extracellular solute-binding protein, family 7 AL538_RS15105 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AL538_RS15110 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AL538_RS15120 PF00158 Sigma-54 interaction domain AL538_RS15120 PF00072 Response regulator receiver domain AL538_RS15120 PF02954 Bacterial regulatory protein, Fis family AL538_RS15125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS15125 PF02743 Cache domain AL538_RS15125 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS15130 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AL538_RS15130 PF05697 Bacterial trigger factor protein (TF) AL538_RS15130 PF05698 Bacterial trigger factor protein (TF) C-terminus AL538_RS15135 PF00574 Clp protease AL538_RS15140 PF07724 AAA domain (Cdc48 subfamily) AL538_RS15140 PF06689 ClpX C4-type zinc finger AL538_RS15140 PF10431 C-terminal, D2-small domain, of ClpB protein AL538_RS15145 PF02190 ATP-dependent protease La (LON) substrate-binding domain AL538_RS15145 PF00004 ATPase family associated with various cellular activities (AAA) AL538_RS15145 PF05362 Lon protease (S16) C-terminal proteolytic domain AL538_RS15150 PF00216 Bacterial DNA-binding protein AL538_RS15155 PF13145 PPIC-type PPIASE domain AL538_RS15175 PF01966 HD domain AL538_RS15175 PF13286 Phosphohydrolase-associated domain AL538_RS15185 PF00155 Aminotransferase class I and II AL538_RS15190 PF00425 chorismate binding enzyme AL538_RS15195 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AL538_RS15195 PF16582 Middle domain of thiamine pyrophosphate AL538_RS15195 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AL538_RS15200 PF12697 Alpha/beta hydrolase family AL538_RS15205 PF00378 Enoyl-CoA hydratase/isomerase AL538_RS15210 PF13378 Enolase C-terminal domain-like AL538_RS15215 PF13193 AMP-binding enzyme C-terminal domain AL538_RS15215 PF00501 AMP-binding enzyme AL538_RS15220 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AL538_RS15220 PF00367 phosphotransferase system, EIIB AL538_RS15220 PF02378 Phosphotransferase system, EIIC AL538_RS15225 PF03466 LysR substrate binding domain AL538_RS15225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS15245 PF03601 Conserved hypothetical protein 698 AL538_RS15250 PF07690 Major Facilitator Superfamily AL538_RS15295 PF13533 Biotin-lipoyl like AL538_RS15300 PF00873 AcrB/AcrD/AcrF family AL538_RS15320 PF00291 Pyridoxal-phosphate dependent enzyme AL538_RS15325 PF13404 AsnC-type helix-turn-helix domain AL538_RS15325 PF01037 Lrp/AsnC ligand binding domain AL538_RS15335 PF01609 Transposase DDE domain AL538_RS15335 PF13006 Insertion element 4 transposase N-terminal AL538_RS15345 PF09619 Type III secretion system lipoprotein chaperone (YscW) AL538_RS15350 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AL538_RS15360 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS15370 PF00689 Cation transporting ATPase, C-terminus AL538_RS15370 PF00690 Cation transporter/ATPase, N-terminus AL538_RS15375 PF08032 RNA 2'-O ribose methyltransferase substrate binding AL538_RS15375 PF00588 SpoU rRNA Methylase family AL538_RS15380 PF11953 Domain of unknown function (DUF3470) AL538_RS15380 PF00037 4Fe-4S binding domain AL538_RS15390 PF00571 CBS domain AL538_RS15390 PF01743 Poly A polymerase head domain AL538_RS15395 PF01554 MatE AL538_RS15400 PF00403 Heavy-metal-associated domain AL538_RS15405 PF01048 Phosphorylase superfamily AL538_RS15415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS15415 PF00672 HAMP domain AL538_RS15420 PF01230 HIT domain AL538_RS15435 PF13036 Peptidoglycan-synthase activator LpoB AL538_RS15435 PF08139 Prokaryotic membrane lipoprotein lipid attachment site AL538_RS15445 PF05728 Uncharacterised protein family (UPF0227) AL538_RS15450 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL538_RS15465 PF17757 UvrB interaction domain AL538_RS15465 PF03461 TRCF domain AL538_RS15465 PF00271 Helicase conserved C-terminal domain AL538_RS15465 PF00270 DEAD/DEAH box helicase AL538_RS15465 PF02559 CarD-like/TRCF domain AL538_RS15475 PF02687 FtsX-like permease family AL538_RS15475 PF12704 MacB-like periplasmic core domain AL538_RS15480 PF00005 ABC transporter AL538_RS15485 PF12704 MacB-like periplasmic core domain AL538_RS15485 PF02687 FtsX-like permease family AL538_RS15495 PF03772 Competence protein AL538_RS15495 PF00753 Metallo-beta-lactamase superfamily AL538_RS15500 PF00664 ABC transporter transmembrane region AL538_RS15500 PF00005 ABC transporter AL538_RS15505 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AL538_RS15510 PF03966 Trm112p-like protein AL538_RS15515 PF02348 Cytidylyltransferase AL538_RS15520 PF04293 SpoVR like protein AL538_RS15525 PF04285 Protein of unknown function (DUF444) AL538_RS15530 PF08298 PrkA AAA domain AL538_RS15530 PF06798 PrkA serine protein kinase C-terminal domain AL538_RS15540 PF03887 YfbU domain AL538_RS15550 PF04055 Radical SAM superfamily AL538_RS15560 PF01228 Glycine radical AL538_RS15560 PF02901 Pyruvate formate lyase-like AL538_RS15580 PF00005 ABC transporter AL538_RS15585 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL538_RS15590 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS15595 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS15605 PF03372 Endonuclease/Exonuclease/phosphatase family AL538_RS15610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS15610 PF00672 HAMP domain AL538_RS15615 PF10689 Protein of unknown function (DUF2496) AL538_RS15625 PF01925 Sulfite exporter TauE/SafE AL538_RS15630 PF06733 DEAD_2 AL538_RS15630 PF13307 Helicase C-terminal domain AL538_RS15640 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) AL538_RS15645 PF00849 RNA pseudouridylate synthase AL538_RS15650 PF03971 Monomeric isocitrate dehydrogenase AL538_RS15655 PF00313 'Cold-shock' DNA-binding domain AL538_RS15660 PF02617 ATP-dependent Clp protease adaptor protein ClpS AL538_RS15665 PF17871 AAA lid domain AL538_RS15665 PF02861 Clp amino terminal domain, pathogenicity island component AL538_RS15665 PF10431 C-terminal, D2-small domain, of ClpB protein AL538_RS15665 PF07724 AAA domain (Cdc48 subfamily) AL538_RS15665 PF00004 ATPase family associated with various cellular activities (AAA) AL538_RS15670 PF01176 Translation initiation factor 1A / IF-1 AL538_RS15675 PF04376 Arginine-tRNA-protein transferase, N terminus AL538_RS15675 PF04377 Arginine-tRNA-protein transferase, C terminus AL538_RS15680 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AL538_RS15690 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AL538_RS15695 PF10692 Protein of unknown function (DUF2498) AL538_RS15700 PF08272 Topoisomerase I zinc-ribbon-like AL538_RS15700 PF01131 DNA topoisomerase AL538_RS15700 PF01751 Toprim domain AL538_RS15700 PF01396 Topoisomerase DNA binding C4 zinc finger AL538_RS15705 PF00483 Nucleotidyl transferase AL538_RS15710 PF08323 Starch synthase catalytic domain AL538_RS15710 PF00534 Glycosyl transferases group 1 AL538_RS15730 PF04994 TfoX C-terminal domain AL538_RS15730 PF04993 TfoX N-terminal domain AL538_RS15735 PF00356 Bacterial regulatory proteins, lacI family AL538_RS15740 PF02613 Nitrate reductase delta subunit AL538_RS15745 PF00486 Transcriptional regulatory protein, C terminal AL538_RS15745 PF00072 Response regulator receiver domain AL538_RS15750 PF02698 DUF218 domain AL538_RS15755 PF13847 Methyltransferase domain AL538_RS15760 PF17192 MukF middle domain AL538_RS15760 PF17193 MukF C-terminal domain AL538_RS15760 PF03882 MukF winged-helix domain AL538_RS15765 PF04288 MukE-like family AL538_RS15770 PF16330 MukB hinge domain AL538_RS15770 PF04310 MukB N-terminal AL538_RS15780 PF08443 RimK-like ATP-grasp domain AL538_RS15780 PF18030 RimK PreATP-grasp domain AL538_RS15790 PF18030 RimK PreATP-grasp domain AL538_RS15790 PF08443 RimK-like ATP-grasp domain AL538_RS15800 PF08003 Protein of unknown function (DUF1698) AL538_RS15805 PF13649 Methyltransferase domain AL538_RS15810 PF01904 Protein of unknown function DUF72 AL538_RS15815 PF02938 GAD domain AL538_RS15815 PF01336 OB-fold nucleic acid binding domain AL538_RS15815 PF00152 tRNA synthetases class II (D, K and N) AL538_RS15820 PF02075 Crossover junction endodeoxyribonuclease RuvC AL538_RS15825 PF02203 Tar ligand binding domain homologue AL538_RS15825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS15825 PF00672 HAMP domain AL538_RS15830 PF07499 RuvA, C-terminal domain AL538_RS15830 PF01330 RuvA N terminal domain AL538_RS15835 PF05496 Holliday junction DNA helicase RuvB P-loop domain AL538_RS15835 PF17864 RuvB AAA lid domain AL538_RS15835 PF05491 RuvB C-terminal winged helix domain AL538_RS15840 PF01654 Cytochrome bd terminal oxidase subunit I AL538_RS15845 PF02322 Cytochrome bd terminal oxidase subunit II AL538_RS15850 PF08173 Membrane bound YbgT-like protein AL538_RS15860 PF03061 Thioesterase superfamily AL538_RS15865 PF01618 MotA/TolQ/ExbB proton channel family AL538_RS15870 PF02472 Biopolymer transport protein ExbD/TolR AL538_RS15880 PF04052 TolB amino-terminal domain AL538_RS15880 PF07676 WD40-like Beta Propeller Repeat AL538_RS15885 PF00691 OmpA family AL538_RS15890 PF16331 TolA binding protein trimerisation AL538_RS15890 PF13174 Tetratricopeptide repeat AL538_RS15895 PF01380 SIS domain AL538_RS15895 PF00571 CBS domain AL538_RS15900 PF03928 Haem-degrading AL538_RS15905 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AL538_RS15905 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AL538_RS15910 PF05524 PEP-utilising enzyme, N-terminal AL538_RS15910 PF00391 PEP-utilising enzyme, mobile domain AL538_RS15910 PF02896 PEP-utilising enzyme, TIM barrel domain AL538_RS15910 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AL538_RS15910 PF00381 PTS HPr component phosphorylation site AL538_RS15920 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AL538_RS15925 PF02901 Pyruvate formate lyase-like AL538_RS15925 PF01228 Glycine radical AL538_RS15930 PF04055 Radical SAM superfamily AL538_RS15935 PF04321 RmlD substrate binding domain AL538_RS15940 PF00923 Transaldolase/Fructose-6-phosphate aldolase AL538_RS15945 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AL538_RS15950 PF12833 Helix-turn-helix domain AL538_RS15955 PF00465 Iron-containing alcohol dehydrogenase AL538_RS15960 PF13419 Haloacid dehalogenase-like hydrolase AL538_RS15965 PF01238 Phosphomannose isomerase type I AL538_RS15970 PF02445 Quinolinate synthetase A protein AL538_RS15980 PF03994 Domain of Unknown Function (DUF350) AL538_RS15990 PF03738 Glutathionylspermidine synthase preATP-grasp AL538_RS16000 PF00072 Response regulator receiver domain AL538_RS16000 PF09308 LuxQ, periplasmic AL538_RS16000 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS16000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS16005 PF06610 L-alanine exporter AL538_RS16030 PF12833 Helix-turn-helix domain AL538_RS16045 PF00263 Bacterial type II and III secretion system protein AL538_RS16045 PF03958 Bacterial type II/III secretion system short domain AL538_RS16060 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF AL538_RS16075 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI AL538_RS16080 PF01514 Secretory protein of YscJ/FliF family AL538_RS16090 PF02108 Flagellar assembly protein FliH AL538_RS16125 PF01312 FlhB HrpN YscU SpaS Family AL538_RS16130 PF01311 Bacterial export proteins, family 1 AL538_RS16135 PF01313 Bacterial export proteins, family 3 AL538_RS16140 PF00813 FliP family AL538_RS16145 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AL538_RS16160 PF02874 ATP synthase alpha/beta family, beta-barrel domain AL538_RS16160 PF18269 T3SS EscN ATPase C-terminal domain AL538_RS16160 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AL538_RS16165 PF07201 HrpJ-like domain AL538_RS16170 PF09059 TyeA AL538_RS16190 PF00771 FHIPEP family AL538_RS16195 PF09621 Type III secretion system regulator (LcrR) AL538_RS16205 PF04792 V antigen (LcrV) protein AL538_RS16210 PF07720 Tetratricopeptide repeat AL538_RS16220 PF05844 YopD protein AL538_RS16225 PF13411 MerR HTH family regulatory protein AL538_RS16230 PF02627 Carboxymuconolactone decarboxylase family AL538_RS16235 PF11471 Maltoporin periplasmic N-terminal extension AL538_RS16235 PF02264 LamB porin AL538_RS16240 PF00356 Bacterial regulatory proteins, lacI family AL538_RS16245 PF02378 Phosphotransferase system, EIIC AL538_RS16245 PF00367 phosphotransferase system, EIIB AL538_RS16250 PF00294 pfkB family carbohydrate kinase AL538_RS16255 PF08244 Glycosyl hydrolases family 32 C terminal AL538_RS16255 PF00251 Glycosyl hydrolases family 32 N-terminal domain AL538_RS16260 PF08274 PhnA Zinc-Ribbon AL538_RS16260 PF03831 PhnA domain AL538_RS16270 PF00593 TonB dependent receptor AL538_RS16270 PF07715 TonB-dependent Receptor Plug Domain AL538_RS16275 PF00325 Bacterial regulatory proteins, crp family AL538_RS16275 PF00027 Cyclic nucleotide-binding domain AL538_RS16300 PF01554 MatE AL538_RS16305 PF00005 ABC transporter AL538_RS16305 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL538_RS16310 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL538_RS16310 PF00005 ABC transporter AL538_RS16315 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL538_RS16320 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS16330 PF00672 HAMP domain AL538_RS16330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS16330 PF02743 Cache domain AL538_RS16335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS16335 PF03466 LysR substrate binding domain AL538_RS16340 PF07715 TonB-dependent Receptor Plug Domain AL538_RS16340 PF00593 TonB dependent receptor AL538_RS16360 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL538_RS16360 PF00529 HlyD membrane-fusion protein of T1SS AL538_RS16365 PF00873 AcrB/AcrD/AcrF family AL538_RS16375 PF00392 Bacterial regulatory proteins, gntR family AL538_RS16375 PF07729 FCD domain AL538_RS16385 PF07687 Peptidase dimerisation domain AL538_RS16385 PF01546 Peptidase family M20/M25/M40 AL538_RS16390 PF03606 C4-dicarboxylate anaerobic carrier AL538_RS16400 PF01557 Fumarylacetoacetate (FAA) hydrolase family AL538_RS16415 PF00474 Sodium:solute symporter family AL538_RS16435 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AL538_RS16435 PF02811 PHP domain AL538_RS16435 PF14579 Helix-hairpin-helix motif AL538_RS16435 PF07733 Bacterial DNA polymerase III alpha NTPase domain AL538_RS16435 PF00929 Exonuclease AL538_RS16440 PF00571 CBS domain AL538_RS16445 PF07729 FCD domain AL538_RS16445 PF00392 Bacterial regulatory proteins, gntR family AL538_RS16455 PF07729 FCD domain AL538_RS16455 PF00392 Bacterial regulatory proteins, gntR family AL538_RS16465 PF07940 Heparinase II/III-like protein AL538_RS16465 PF05426 Alginate lyase AL538_RS16470 PF05426 Alginate lyase AL538_RS16470 PF07940 Heparinase II/III-like protein AL538_RS16475 PF07883 Cupin domain AL538_RS16480 PF00294 pfkB family carbohydrate kinase AL538_RS16485 PF01081 KDPG and KHG aldolase AL538_RS16490 PF00474 Sodium:solute symporter family AL538_RS16500 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AL538_RS16500 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AL538_RS16505 PF00141 Peroxidase AL538_RS16515 PF00579 tRNA synthetases class I (W and Y) AL538_RS16530 PF03372 Endonuclease/Exonuclease/phosphatase family AL538_RS16535 PF02743 Cache domain AL538_RS16535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS16535 PF00672 HAMP domain AL538_RS16540 PF01752 Collagenase AL538_RS16540 PF08453 Peptidase family M9 N-terminal AL538_RS16540 PF04151 Bacterial pre-peptidase C-terminal domain AL538_RS16555 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AL538_RS16565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS16565 PF03466 LysR substrate binding domain AL538_RS16575 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AL538_RS16575 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AL538_RS16580 PF01037 Lrp/AsnC ligand binding domain AL538_RS16585 PF17854 FtsK alpha domain AL538_RS16585 PF01580 FtsK/SpoIIIE family AL538_RS16585 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AL538_RS16585 PF09397 Ftsk gamma domain AL538_RS16590 PF03548 Outer membrane lipoprotein carrier protein LolA AL538_RS16595 PF12002 MgsA AAA+ ATPase C terminal AL538_RS16595 PF16193 AAA C-terminal domain AL538_RS16595 PF00004 ATPase family associated with various cellular activities (AAA) AL538_RS16600 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AL538_RS16600 PF02403 Seryl-tRNA synthetase N-terminal domain AL538_RS16615 PF01258 Prokaryotic dksA/traR C4-type zinc finger AL538_RS16620 PF00202 Aminotransferase class-III AL538_RS16625 PF06968 Biotin and Thiamin Synthesis associated domain AL538_RS16625 PF04055 Radical SAM superfamily AL538_RS16630 PF00155 Aminotransferase class I and II AL538_RS16635 PF08241 Methyltransferase domain AL538_RS16650 PF01435 Peptidase family M48 AL538_RS16660 PF00106 short chain dehydrogenase AL538_RS16685 PF16036 Chalcone isomerase-like AL538_RS16695 PF08328 Adenylosuccinate lyase C-terminal AL538_RS16695 PF00206 Lyase AL538_RS16700 PF04356 Protein of unknown function (DUF489) AL538_RS16715 PF00294 pfkB family carbohydrate kinase AL538_RS16720 PF00816 H-NS histone family AL538_RS16725 PF03553 Na+/H+ antiporter family AL538_RS16730 PF00158 Sigma-54 interaction domain AL538_RS16730 PF00072 Response regulator receiver domain AL538_RS16730 PF02954 Bacterial regulatory protein, Fis family AL538_RS16735 PF01634 ATP phosphoribosyltransferase AL538_RS16735 PF08029 HisG, C-terminal domain AL538_RS16740 PF00815 Histidinol dehydrogenase AL538_RS16745 PF00155 Aminotransferase class I and II AL538_RS16750 PF00475 Imidazoleglycerol-phosphate dehydratase AL538_RS16750 PF08645 Polynucleotide kinase 3 phosphatase AL538_RS16755 PF00117 Glutamine amidotransferase class-I AL538_RS16760 PF00977 Histidine biosynthesis protein AL538_RS16765 PF00977 Histidine biosynthesis protein AL538_RS16770 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AL538_RS16770 PF01502 Phosphoribosyl-AMP cyclohydrolase AL538_RS16775 PF02810 SEC-C motif AL538_RS16780 PF00563 EAL domain AL538_RS16780 PF08668 HDOD domain AL538_RS16785 PF00149 Calcineurin-like phosphoesterase AL538_RS16790 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AL538_RS16795 PF01406 tRNA synthetases class I (C) catalytic domain AL538_RS16795 PF09190 DALR domain AL538_RS16800 PF00265 Thymidine kinase AL538_RS16805 PF02698 DUF218 domain AL538_RS16830 PF01226 Formate/nitrite transporter AL538_RS16835 PF03649 Uncharacterised protein family (UPF0014) AL538_RS16840 PF06796 Periplasmic nitrate reductase protein NapE AL538_RS16845 PF03264 NapC/NirT cytochrome c family, N-terminal region AL538_RS16850 PF18364 Molybdopterin oxidoreductase N-terminal domain AL538_RS16850 PF01568 Molydopterin dinucleotide binding domain AL538_RS16850 PF00384 Molybdopterin oxidoreductase AL538_RS16855 PF16875 Glycosyl hydrolase family 36 N-terminal domain AL538_RS16855 PF16874 Glycosyl hydrolase family 36 C-terminal domain AL538_RS16860 PF01297 Zinc-uptake complex component A periplasmic AL538_RS16865 PF00005 ABC transporter AL538_RS16870 PF00950 ABC 3 transport family AL538_RS16875 PF00950 ABC 3 transport family AL538_RS16880 PF01368 DHH family AL538_RS16880 PF02833 DHHA2 domain AL538_RS16890 PF00005 ABC transporter AL538_RS16895 PF00005 ABC transporter AL538_RS16895 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL538_RS16900 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS16900 PF12911 N-terminal TM domain of oligopeptide transport permease C AL538_RS16905 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS16910 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL538_RS16915 PF00158 Sigma-54 interaction domain AL538_RS16915 PF02954 Bacterial regulatory protein, Fis family AL538_RS16920 PF04012 PspA/IM30 family AL538_RS16925 PF06667 Phage shock protein B AL538_RS16940 PF13533 Biotin-lipoyl like AL538_RS16945 PF00873 AcrB/AcrD/AcrF family AL538_RS16950 PF03352 Methyladenine glycosylase AL538_RS16955 PF03280 Proteobacterial lipase chaperone protein AL538_RS16960 PF00561 alpha/beta hydrolase fold AL538_RS16965 PF01053 Cys/Met metabolism PLP-dependent enzyme AL538_RS16970 PF13091 PLD-like domain AL538_RS16970 PF13396 Phospholipase_D-nuclease N-terminal AL538_RS16975 PF00209 Sodium:neurotransmitter symporter family AL538_RS16980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS16980 PF12729 Four helix bundle sensory module for signal transduction AL538_RS16980 PF00672 HAMP domain AL538_RS16985 PF00849 RNA pseudouridylate synthase AL538_RS16995 PF00111 2Fe-2S iron-sulfur cluster binding domain AL538_RS16995 PF00175 Oxidoreductase NAD-binding domain AL538_RS16995 PF00970 Oxidoreductase FAD-binding domain AL538_RS17000 PF03063 Prismane/CO dehydrogenase family AL538_RS17005 PF00158 Sigma-54 interaction domain AL538_RS17005 PF01590 GAF domain AL538_RS17010 PF01066 CDP-alcohol phosphatidyltransferase AL538_RS17015 PF00005 ABC transporter AL538_RS17020 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS17025 PF13416 Bacterial extracellular solute-binding protein AL538_RS17030 PF09335 SNARE associated Golgi protein AL538_RS17040 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL538_RS17040 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AL538_RS17050 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS17050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS17055 PF00196 Bacterial regulatory proteins, luxR family AL538_RS17055 PF00072 Response regulator receiver domain AL538_RS17065 PF01740 STAS domain AL538_RS17065 PF00916 Sulfate permease family AL538_RS17075 PF06945 Protein of unknown function (DUF1289) AL538_RS17085 PF02872 5'-nucleotidase, C-terminal domain AL538_RS17085 PF00149 Calcineurin-like phosphoesterase AL538_RS17100 PF01386 Ribosomal L25p family AL538_RS17110 PF02709 N-terminal domain of galactosyltransferase AL538_RS17110 PF00535 Glycosyl transferase family 2 AL538_RS17120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS17125 PF00072 Response regulator receiver domain AL538_RS17125 PF00486 Transcriptional regulatory protein, C terminal AL538_RS17135 PF00271 Helicase conserved C-terminal domain AL538_RS17135 PF04851 Type III restriction enzyme, res subunit AL538_RS17140 PF01479 S4 domain AL538_RS17140 PF00849 RNA pseudouridylate synthase AL538_RS17145 PF07690 Major Facilitator Superfamily AL538_RS17155 PF00474 Sodium:solute symporter family AL538_RS17160 PF16875 Glycosyl hydrolase family 36 N-terminal domain AL538_RS17160 PF16874 Glycosyl hydrolase family 36 C-terminal domain AL538_RS17165 PF00356 Bacterial regulatory proteins, lacI family AL538_RS17170 PF13460 NAD(P)H-binding AL538_RS17170 PF11066 Protein of unknown function (DUF2867) AL538_RS17175 PF01554 MatE AL538_RS17180 PF00005 ABC transporter AL538_RS17195 PF06965 Na+/H+ antiporter 1 AL538_RS17200 PF00440 Bacterial regulatory proteins, tetR family AL538_RS17200 PF16295 Tetracyclin repressor-like, C-terminal domain AL538_RS17205 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL538_RS17205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL538_RS17205 PF09317 Domain of unknown function (DUF1974) AL538_RS17205 PF02770 Acyl-CoA dehydrogenase, middle domain AL538_RS17210 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AL538_RS17210 PF07055 Enoyl reductase FAD binding domain AL538_RS17210 PF12241 Trans-2-enoyl-CoA reductase catalytic region AL538_RS17215 PF06826 Predicted Permease Membrane Region AL538_RS17215 PF02080 TrkA-C domain AL538_RS17220 PF00462 Glutaredoxin AL538_RS17225 PF00465 Iron-containing alcohol dehydrogenase AL538_RS17230 PF01380 SIS domain AL538_RS17230 PF01418 Helix-turn-helix domain, rpiR family AL538_RS17235 PF00282 Pyridoxal-dependent decarboxylase conserved domain AL538_RS17245 PF03956 Lysine exporter LysO AL538_RS17260 PF04993 TfoX N-terminal domain AL538_RS17260 PF04994 TfoX C-terminal domain AL538_RS17275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS17275 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS17275 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL538_RS17285 PF00266 Aminotransferase class-V AL538_RS17295 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS17295 PF00563 EAL domain AL538_RS17295 PF08447 PAS fold AL538_RS17295 PF08448 PAS fold AL538_RS17295 PF13426 PAS domain AL538_RS17295 PF05231 MASE1 AL538_RS17315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS17315 PF03466 LysR substrate binding domain AL538_RS17320 PF02447 GntP family permease AL538_RS17325 PF00291 Pyridoxal-phosphate dependent enzyme AL538_RS17330 PF00664 ABC transporter transmembrane region AL538_RS17330 PF00005 ABC transporter AL538_RS17335 PF00664 ABC transporter transmembrane region AL538_RS17335 PF00005 ABC transporter AL538_RS17340 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL538_RS17350 PF00266 Aminotransferase class-V AL538_RS17360 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS17360 PF08448 PAS fold AL538_RS17365 PF00939 Sodium:sulfate symporter transmembrane region AL538_RS17370 PF02698 DUF218 domain AL538_RS17375 PF00390 Malic enzyme, N-terminal domain AL538_RS17375 PF03949 Malic enzyme, NAD binding domain AL538_RS17380 PF04408 Helicase associated domain (HA2) AL538_RS17380 PF00270 DEAD/DEAH box helicase AL538_RS17380 PF08482 ATP-dependent helicase C-terminal AL538_RS17380 PF00271 Helicase conserved C-terminal domain AL538_RS17395 PF09423 PhoD-like phosphatase AL538_RS17395 PF16655 PhoD-like phosphatase, N-terminal domain AL538_RS17425 PF00939 Sodium:sulfate symporter transmembrane region AL538_RS17430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS17430 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL538_RS17430 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS17435 PF00158 Sigma-54 interaction domain AL538_RS17435 PF00072 Response regulator receiver domain AL538_RS17435 PF02954 Bacterial regulatory protein, Fis family AL538_RS17440 PF03707 Bacterial signalling protein N terminal repeat AL538_RS17440 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS17440 PF00563 EAL domain AL538_RS17445 PF01966 HD domain AL538_RS17445 PF11871 Domain of unknown function (DUF3391) AL538_RS17450 PF01810 LysE type translocator AL538_RS17455 PF11230 Protein of unknown function (DUF3029) AL538_RS17460 PF04055 Radical SAM superfamily AL538_RS17465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS17465 PF03466 LysR substrate binding domain AL538_RS17470 PF03741 Integral membrane protein TerC family AL538_RS17480 PF01966 HD domain AL538_RS17485 PF00106 short chain dehydrogenase AL538_RS17490 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS17490 PF17158 Membrane-associated sensor, integral membrane domain AL538_RS17500 PF00465 Iron-containing alcohol dehydrogenase AL538_RS17505 PF03222 Tryptophan/tyrosine permease family AL538_RS17520 PF00005 ABC transporter AL538_RS17525 PF01497 Periplasmic binding protein AL538_RS17530 PF01032 FecCD transport family AL538_RS17535 PF00593 TonB dependent receptor AL538_RS17535 PF07715 TonB-dependent Receptor Plug Domain AL538_RS17550 PF00005 ABC transporter AL538_RS17550 PF00664 ABC transporter transmembrane region AL538_RS17555 PF00664 ABC transporter transmembrane region AL538_RS17555 PF00005 ABC transporter AL538_RS17560 PF07963 Prokaryotic N-terminal methylation motif AL538_RS17570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS17570 PF03466 LysR substrate binding domain AL538_RS17580 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AL538_RS17580 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AL538_RS17595 PF00012 Hsp70 protein AL538_RS17600 PF00012 Hsp70 protein AL538_RS17610 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS17640 PF00384 Molybdopterin oxidoreductase AL538_RS17640 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AL538_RS17640 PF01568 Molydopterin dinucleotide binding domain AL538_RS17645 PF12800 4Fe-4S binding domain AL538_RS17645 PF13247 4Fe-4S dicluster domain AL538_RS17650 PF04976 DMSO reductase anchor subunit (DmsC) AL538_RS17655 PF02613 Nitrate reductase delta subunit AL538_RS17665 PF02525 Flavodoxin-like fold AL538_RS17670 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AL538_RS17670 PF00270 DEAD/DEAH box helicase AL538_RS17670 PF11898 Domain of unknown function (DUF3418) AL538_RS17670 PF04408 Helicase associated domain (HA2) AL538_RS17670 PF00271 Helicase conserved C-terminal domain AL538_RS17700 PF04204 Homoserine O-succinyltransferase AL538_RS17715 PF00893 Small Multidrug Resistance protein AL538_RS17720 PF13520 Amino acid permease AL538_RS17725 PF01810 LysE type translocator AL538_RS17730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS17730 PF03466 LysR substrate binding domain AL538_RS17735 PF03279 Bacterial lipid A biosynthesis acyltransferase AL538_RS17750 PF01047 MarR family AL538_RS17760 PF02074 Carboxypeptidase Taq (M32) metallopeptidase AL538_RS17765 PF00072 Response regulator receiver domain AL538_RS17765 PF00196 Bacterial regulatory proteins, luxR family AL538_RS17800 PF01810 LysE type translocator AL538_RS17810 PF00529 HlyD membrane-fusion protein of T1SS AL538_RS17810 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL538_RS17815 PF00873 AcrB/AcrD/AcrF family AL538_RS17820 PF16868 NMT1-like family AL538_RS17825 PF01925 Sulfite exporter TauE/SafE AL538_RS17830 PF01970 Tripartite tricarboxylate transporter TctA family AL538_RS17850 PF00583 Acetyltransferase (GNAT) family AL538_RS17865 PF03793 PASTA domain AL538_RS17865 PF00069 Protein kinase domain AL538_RS17880 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE AL538_RS17900 PF00004 ATPase family associated with various cellular activities (AAA) AL538_RS17900 PF07724 AAA domain (Cdc48 subfamily) AL538_RS17900 PF17871 AAA lid domain AL538_RS17900 PF10431 C-terminal, D2-small domain, of ClpB protein AL538_RS17920 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath AL538_RS17925 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath AL538_RS17955 PF06715 Gp5 C-terminal repeat (3 copies) AL538_RS17955 PF04717 Type VI secretion system, phage-baseplate injector AL538_RS17975 PF00285 Citrate synthase, C-terminal domain AL538_RS17980 PF00694 Aconitase C-terminal domain AL538_RS17980 PF00330 Aconitase family (aconitate hydratase) AL538_RS17985 PF04303 PrpF protein AL538_RS17990 PF00501 AMP-binding enzyme AL538_RS17990 PF13193 AMP-binding enzyme C-terminal domain AL538_RS17990 PF16177 Acetyl-coenzyme A synthetase N-terminus AL538_RS18000 PF00089 Trypsin AL538_RS18015 PF04055 Radical SAM superfamily AL538_RS18020 PF06508 Queuosine biosynthesis protein QueC AL538_RS18025 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS18025 PF13185 GAF domain AL538_RS18035 PF05736 OprF membrane domain AL538_RS18035 PF00691 OmpA family AL538_RS18055 PF13322 Domain of unknown function (DUF4092) AL538_RS18055 PF13402 Peptidase M60, enhancin and enhancin-like AL538_RS18055 PF17291 N-terminal domain of M60-like peptidases AL538_RS18065 PF02397 Bacterial sugar transferase AL538_RS18070 PF00535 Glycosyl transferase family 2 AL538_RS18075 PF13439 Glycosyltransferase Family 4 AL538_RS18075 PF00534 Glycosyl transferases group 1 AL538_RS18105 PF00534 Glycosyl transferases group 1 AL538_RS18105 PF13439 Glycosyltransferase Family 4 AL538_RS18115 PF00005 ABC transporter AL538_RS18120 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS18125 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS18130 PF12849 PBP superfamily domain AL538_RS18135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS18135 PF02743 Cache domain AL538_RS18135 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS18140 PF00072 Response regulator receiver domain AL538_RS18140 PF01966 HD domain AL538_RS18145 PF14602 Hexapeptide repeat of succinyl-transferase AL538_RS18145 PF12464 Maltose acetyltransferase AL538_RS18150 PF00529 HlyD membrane-fusion protein of T1SS AL538_RS18155 PF00664 ABC transporter transmembrane region AL538_RS18155 PF00005 ABC transporter AL538_RS18165 PF00196 Bacterial regulatory proteins, luxR family AL538_RS18170 PF00196 Bacterial regulatory proteins, luxR family AL538_RS18180 PF00672 HAMP domain AL538_RS18180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS18180 PF02743 Cache domain AL538_RS18185 PF07726 ATPase family associated with various cellular activities (AAA) AL538_RS18185 PF17863 AAA lid domain AL538_RS18190 PF01882 Protein of unknown function DUF58 AL538_RS18200 PF13519 von Willebrand factor type A domain AL538_RS18205 PF13519 von Willebrand factor type A domain AL538_RS18220 PF00005 ABC transporter AL538_RS18225 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS18230 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS18235 PF12849 PBP superfamily domain AL538_RS18240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS18240 PF00672 HAMP domain AL538_RS18240 PF02743 Cache domain AL538_RS18260 PF07715 TonB-dependent Receptor Plug Domain AL538_RS18260 PF00593 TonB dependent receptor AL538_RS18265 PF00326 Prolyl oligopeptidase family AL538_RS18265 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AL538_RS18275 PF00270 DEAD/DEAH box helicase AL538_RS18275 PF00271 Helicase conserved C-terminal domain AL538_RS18285 PF17969 L,D-transpeptidase C-terminal domain AL538_RS18285 PF03734 L,D-transpeptidase catalytic domain AL538_RS18285 PF01476 LysM domain AL538_RS18290 PF00875 DNA photolyase AL538_RS18290 PF03441 FAD binding domain of DNA photolyase AL538_RS18295 PF13411 MerR HTH family regulatory protein AL538_RS18300 PF08349 Protein of unknown function (DUF1722) AL538_RS18310 PF01048 Phosphorylase superfamily AL538_RS18325 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS18335 PF11742 Protein of unknown function (DUF3302) AL538_RS18340 PF00529 HlyD membrane-fusion protein of T1SS AL538_RS18340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL538_RS18345 PF07155 ECF-type riboflavin transporter, S component AL538_RS18350 PF12558 ATP-binding cassette cobalt transporter AL538_RS18350 PF00005 ABC transporter AL538_RS18365 PF01022 Bacterial regulatory protein, arsR family AL538_RS18370 PF12801 4Fe-4S binding domain AL538_RS18370 PF12837 4Fe-4S binding domain AL538_RS18375 PF12800 4Fe-4S binding domain AL538_RS18375 PF12838 4Fe-4S dicluster domain AL538_RS18395 PF12945 Flagellar protein YcgR AL538_RS18395 PF07238 PilZ domain AL538_RS18400 PF12729 Four helix bundle sensory module for signal transduction AL538_RS18400 PF00672 HAMP domain AL538_RS18400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS18405 PF00672 HAMP domain AL538_RS18405 PF12729 Four helix bundle sensory module for signal transduction AL538_RS18405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS18410 PF05362 Lon protease (S16) C-terminal proteolytic domain AL538_RS18410 PF13654 AAA domain AL538_RS18420 PF00005 ABC transporter AL538_RS18420 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL538_RS18425 PF00326 Prolyl oligopeptidase family AL538_RS18425 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AL538_RS18430 PF03466 LysR substrate binding domain AL538_RS18430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS18435 PF02652 L-lactate permease AL538_RS18440 PF01070 FMN-dependent dehydrogenase AL538_RS18450 PF00924 Mechanosensitive ion channel AL538_RS18455 PF03466 LysR substrate binding domain AL538_RS18455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS18465 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AL538_RS18465 PF13378 Enolase C-terminal domain-like AL538_RS18475 PF00679 Elongation factor G C-terminus AL538_RS18475 PF00009 Elongation factor Tu GTP binding domain AL538_RS18475 PF03144 Elongation factor Tu domain 2 AL538_RS18475 PF14492 Elongation Factor G, domain II AL538_RS18475 PF03764 Elongation factor G, domain IV AL538_RS18495 PF02001 Protein of unknown function DUF134 AL538_RS18505 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS18510 PF00005 ABC transporter AL538_RS18510 PF00571 CBS domain AL538_RS18525 PF01048 Phosphorylase superfamily AL538_RS18530 PF00582 Universal stress protein family AL538_RS18535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS18535 PF03466 LysR substrate binding domain AL538_RS18560 PF06942 GlpM protein AL538_RS18575 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AL538_RS18575 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AL538_RS18585 PF00857 Isochorismatase family AL538_RS18590 PF00080 Copper/zinc superoxide dismutase (SODC) AL538_RS18600 PF00199 Catalase AL538_RS18600 PF06628 Catalase-related immune-responsive AL538_RS18620 PF01238 Phosphomannose isomerase type I AL538_RS18625 PF00155 Aminotransferase class I and II AL538_RS18630 PF00367 phosphotransferase system, EIIB AL538_RS18630 PF02378 Phosphotransferase system, EIIC AL538_RS18635 PF00356 Bacterial regulatory proteins, lacI family AL538_RS18635 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AL538_RS18640 PF08220 DeoR-like helix-turn-helix domain AL538_RS18640 PF00455 DeoR C terminal sensor domain AL538_RS18645 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL538_RS18650 PF01625 Peptide methionine sulfoxide reductase AL538_RS18650 PF01641 SelR domain AL538_RS18660 PF02378 Phosphotransferase system, EIIC AL538_RS18660 PF00367 phosphotransferase system, EIIB AL538_RS18665 PF01546 Peptidase family M20/M25/M40 AL538_RS18670 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AL538_RS18675 PF02780 Transketolase, C-terminal domain AL538_RS18675 PF02779 Transketolase, pyrimidine binding domain AL538_RS18675 PF00456 Transketolase, thiamine diphosphate binding domain AL538_RS18680 PF00923 Transaldolase/Fructose-6-phosphate aldolase AL538_RS18685 PF13419 Haloacid dehalogenase-like hydrolase AL538_RS18690 PF00465 Iron-containing alcohol dehydrogenase AL538_RS18705 PF00455 DeoR C terminal sensor domain AL538_RS18705 PF08220 DeoR-like helix-turn-helix domain AL538_RS18720 PF07971 Glycosyl hydrolase family 92 AL538_RS18720 PF17678 Glycosyl hydrolase family 92 N-terminal domain AL538_RS18725 PF07971 Glycosyl hydrolase family 92 AL538_RS18725 PF17678 Glycosyl hydrolase family 92 N-terminal domain AL538_RS18735 PF17678 Glycosyl hydrolase family 92 N-terminal domain AL538_RS18735 PF07971 Glycosyl hydrolase family 92 AL538_RS18740 PF17678 Glycosyl hydrolase family 92 N-terminal domain AL538_RS18740 PF07971 Glycosyl hydrolase family 92 AL538_RS18750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS18750 PF03466 LysR substrate binding domain AL538_RS18755 PF01810 LysE type translocator AL538_RS18760 PF00581 Rhodanese-like domain AL538_RS18775 PF00440 Bacterial regulatory proteins, tetR family AL538_RS18775 PF13977 BetI-type transcriptional repressor, C-terminal AL538_RS18780 PF03466 LysR substrate binding domain AL538_RS18780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS18795 PF12848 ABC transporter AL538_RS18795 PF00005 ABC transporter AL538_RS18800 PF13409 Glutathione S-transferase, N-terminal domain AL538_RS18805 PF03358 NADPH-dependent FMN reductase AL538_RS18810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS18810 PF03466 LysR substrate binding domain AL538_RS18820 PF09905 DNA-binding protein VF530 AL538_RS18825 PF00005 ABC transporter AL538_RS18825 PF12848 ABC transporter AL538_RS18840 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL538_RS18845 PF02567 Phenazine biosynthesis-like protein AL538_RS18860 PF05114 Protein of unknown function (DUF692) AL538_RS18875 PF01654 Cytochrome bd terminal oxidase subunit I AL538_RS18880 PF02322 Cytochrome bd terminal oxidase subunit II AL538_RS18900 PF13344 Haloacid dehalogenase-like hydrolase AL538_RS18900 PF00293 NUDIX domain AL538_RS18915 PF00561 alpha/beta hydrolase fold AL538_RS18920 PF12833 Helix-turn-helix domain AL538_RS18920 PF12852 Cupin AL538_RS18925 PF17853 GGDEF-like domain AL538_RS18925 PF12833 Helix-turn-helix domain AL538_RS18935 PF02901 Pyruvate formate lyase-like AL538_RS18935 PF01228 Glycine radical AL538_RS18940 PF04055 Radical SAM superfamily AL538_RS18945 PF00923 Transaldolase/Fructose-6-phosphate aldolase AL538_RS18960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS18960 PF00672 HAMP domain AL538_RS18960 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS18965 PF00486 Transcriptional regulatory protein, C terminal AL538_RS18965 PF00072 Response regulator receiver domain AL538_RS18975 PF00583 Acetyltransferase (GNAT) family AL538_RS18985 PF07690 Major Facilitator Superfamily AL538_RS18990 PF03466 LysR substrate binding domain AL538_RS18990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS19000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS19000 PF03466 LysR substrate binding domain AL538_RS19005 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AL538_RS19015 PF00892 EamA-like transporter family AL538_RS19035 PF13533 Biotin-lipoyl like AL538_RS19045 PF01594 AI-2E family transporter AL538_RS19050 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) AL538_RS19065 PF00175 Oxidoreductase NAD-binding domain AL538_RS19065 PF00970 Oxidoreductase FAD-binding domain AL538_RS19075 PF09905 DNA-binding protein VF530 AL538_RS19080 PF03466 LysR substrate binding domain AL538_RS19080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS19090 PF00881 Nitroreductase family AL538_RS19100 PF00128 Alpha amylase, catalytic domain AL538_RS19100 PF00686 Starch binding domain AL538_RS19105 PF07943 Penicillin-binding protein 5, C-terminal domain AL538_RS19105 PF00768 D-alanyl-D-alanine carboxypeptidase AL538_RS19110 PF00561 alpha/beta hydrolase fold AL538_RS19120 PF01809 Putative membrane protein insertion efficiency factor AL538_RS19140 PF00268 Ribonucleotide reductase, small chain AL538_RS19145 PF00317 Ribonucleotide reductase, all-alpha domain AL538_RS19145 PF02867 Ribonucleotide reductase, barrel domain AL538_RS19145 PF03477 ATP cone domain AL538_RS19150 PF00581 Rhodanese-like domain AL538_RS19150 PF17773 UPF0176 acylphosphatase like domain AL538_RS19160 PF03441 FAD binding domain of DNA photolyase AL538_RS19160 PF00875 DNA photolyase AL538_RS19165 PF02469 Fasciclin domain AL538_RS19175 PF01734 Patatin-like phospholipase AL538_RS19180 PF01914 MarC family integral membrane protein AL538_RS19185 PF00881 Nitroreductase family AL538_RS19190 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AL538_RS19190 PF10531 SLBB domain AL538_RS19190 PF02563 Polysaccharide biosynthesis/export protein AL538_RS19195 PF01451 Low molecular weight phosphotyrosine protein phosphatase AL538_RS19200 PF02706 Chain length determinant protein AL538_RS19200 PF13807 G-rich domain on putative tyrosine kinase AL538_RS19200 PF13614 AAA domain AL538_RS19210 PF08803 Putative mono-oxygenase ydhR AL538_RS19215 PF03466 LysR substrate binding domain AL538_RS19215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS19250 PF00375 Sodium:dicarboxylate symporter family AL538_RS19265 PF06803 Protein of unknown function (DUF1232) AL538_RS19270 PF07687 Peptidase dimerisation domain AL538_RS19270 PF01546 Peptidase family M20/M25/M40 AL538_RS19275 PF07670 Nucleoside recognition AL538_RS19280 PF07670 Nucleoside recognition AL538_RS19295 PF00128 Alpha amylase, catalytic domain AL538_RS19300 PF00912 Transglycosylase AL538_RS19305 PF02806 Alpha amylase, C-terminal all-beta domain AL538_RS19305 PF00128 Alpha amylase, catalytic domain AL538_RS19305 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AL538_RS19310 PF02446 4-alpha-glucanotransferase AL538_RS19320 PF00343 Carbohydrate phosphorylase AL538_RS19330 PF17874 MalT-like TPR region AL538_RS19330 PF00196 Bacterial regulatory proteins, luxR family AL538_RS19345 PF02630 SCO1/SenC AL538_RS19355 PF02378 Phosphotransferase system, EIIC AL538_RS19355 PF00367 phosphotransferase system, EIIB AL538_RS19360 PF03193 RsgA GTPase AL538_RS19365 PF00375 Sodium:dicarboxylate symporter family AL538_RS19370 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AL538_RS19370 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AL538_RS19385 PF01116 Fructose-bisphosphate aldolase class-II AL538_RS19395 PF00294 pfkB family carbohydrate kinase AL538_RS19400 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AL538_RS19400 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AL538_RS19405 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AL538_RS19405 PF00205 Thiamine pyrophosphate enzyme, central domain AL538_RS19405 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AL538_RS19410 PF01261 Xylose isomerase-like TIM barrel AL538_RS19415 PF00083 Sugar (and other) transporter AL538_RS19420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS19420 PF03466 LysR substrate binding domain AL538_RS19430 PF01261 Xylose isomerase-like TIM barrel AL538_RS19435 PF00108 Thiolase, N-terminal domain AL538_RS19435 PF02803 Thiolase, C-terminal domain AL538_RS19440 PF01144 Coenzyme A transferase AL538_RS19445 PF01144 Coenzyme A transferase AL538_RS19455 PF08543 Phosphomethylpyrimidine kinase AL538_RS19465 PF13520 Amino acid permease AL538_RS19470 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AL538_RS19470 PF01276 Orn/Lys/Arg decarboxylase, major domain AL538_RS19470 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AL538_RS19485 PF18494 Pullulanase Ins domain AL538_RS19485 PF17967 Pullulanase N2 domain AL538_RS19485 PF11852 Domain of unknown function (DUF3372) AL538_RS19485 PF03714 Bacterial pullanase-associated domain AL538_RS19485 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AL538_RS19490 PF02595 Glycerate kinase family AL538_RS19495 PF13556 PucR C-terminal helix-turn-helix domain AL538_RS19495 PF17853 GGDEF-like domain AL538_RS19495 PF05651 Putative sugar diacid recognition AL538_RS19505 PF01979 Amidohydrolase family AL538_RS19530 PF13419 Haloacid dehalogenase-like hydrolase AL538_RS19550 PF03466 LysR substrate binding domain AL538_RS19550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS19580 PF00005 ABC transporter AL538_RS19580 PF00664 ABC transporter transmembrane region AL538_RS19585 PF00005 ABC transporter AL538_RS19585 PF00664 ABC transporter transmembrane region AL538_RS19590 PF00593 TonB dependent receptor AL538_RS19590 PF07715 TonB-dependent Receptor Plug Domain AL538_RS19600 PF12833 Helix-turn-helix domain AL538_RS19605 PF03974 Ecotin AL538_RS19610 PF01810 LysE type translocator AL538_RS19615 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL538_RS19630 PF01204 Trehalase AL538_RS19640 PF12706 Beta-lactamase superfamily domain AL538_RS19650 PF07690 Major Facilitator Superfamily AL538_RS19655 PF13533 Biotin-lipoyl like AL538_RS19665 PF16868 NMT1-like family AL538_RS19670 PF03922 OmpW family AL538_RS19675 PF13599 Pentapeptide repeats (9 copies) AL538_RS19700 PF00893 Small Multidrug Resistance protein AL538_RS19710 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AL538_RS19710 PF18416 N-acetylglucosamine binding protein domain 2 AL538_RS19715 PF01037 Lrp/AsnC ligand binding domain AL538_RS19720 PF01810 LysE type translocator AL538_RS19725 PF00326 Prolyl oligopeptidase family AL538_RS19730 PF08021 Siderophore-interacting FAD-binding domain AL538_RS19730 PF04954 Siderophore-interacting protein AL538_RS19735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS19735 PF03466 LysR substrate binding domain AL538_RS19745 PF00797 N-acetyltransferase AL538_RS19750 PF00107 Zinc-binding dehydrogenase AL538_RS19750 PF08240 Alcohol dehydrogenase GroES-like domain AL538_RS19755 PF00756 Putative esterase AL538_RS19765 PF05656 Protein of unknown function (DUF805) AL538_RS19775 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS19775 PF17152 Periplasmic sensor domain AL538_RS19795 PF01809 Putative membrane protein insertion efficiency factor AL538_RS19800 PF00849 RNA pseudouridylate synthase AL538_RS19805 PF01554 MatE AL538_RS19810 PF00356 Bacterial regulatory proteins, lacI family AL538_RS19815 PF17912 MalK OB fold domain AL538_RS19815 PF00005 ABC transporter AL538_RS19820 PF00232 Glycosyl hydrolase family 1 AL538_RS19825 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS19830 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS19840 PF00356 Bacterial regulatory proteins, lacI family AL538_RS19845 PF02264 LamB porin AL538_RS19850 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS19850 PF00563 EAL domain AL538_RS19860 PF06865 Pyrimidine/purine nucleoside phosphorylase AL538_RS19870 PF00704 Glycosyl hydrolases family 18 AL538_RS19870 PF08329 Chitinase A, N-terminal domain AL538_RS19890 PF03600 Citrate transporter AL538_RS19915 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AL538_RS19925 PF16325 Peptidase family U32 C-terminal domain AL538_RS19925 PF01136 Peptidase family U32 AL538_RS19935 PF01116 Fructose-bisphosphate aldolase class-II AL538_RS19940 PF01979 Amidohydrolase family AL538_RS19945 PF03610 PTS system fructose IIA component AL538_RS19950 PF03613 PTS system mannose/fructose/sorbose family IID component AL538_RS19955 PF03609 PTS system sorbose-specific iic component AL538_RS19960 PF03830 PTS system sorbose subfamily IIB component AL538_RS19965 PF01380 SIS domain AL538_RS19970 PF08013 Tagatose 6 phosphate kinase AL538_RS19975 PF00455 DeoR C terminal sensor domain AL538_RS19975 PF08220 DeoR-like helix-turn-helix domain AL538_RS19980 PF08220 DeoR-like helix-turn-helix domain AL538_RS19980 PF00455 DeoR C terminal sensor domain AL538_RS19990 PF00005 ABC transporter AL538_RS19995 PF02687 FtsX-like permease family AL538_RS19995 PF12704 MacB-like periplasmic core domain AL538_RS20025 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AL538_RS20025 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AL538_RS20030 PF06029 AlkA N-terminal domain AL538_RS20030 PF00730 HhH-GPD superfamily base excision DNA repair protein AL538_RS20040 PF07681 DoxX AL538_RS20045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS20045 PF03466 LysR substrate binding domain AL538_RS20060 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AL538_RS20080 PF01261 Xylose isomerase-like TIM barrel AL538_RS20085 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AL538_RS20095 PF00596 Class II Aldolase and Adducin N-terminal domain AL538_RS20100 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AL538_RS20105 PF03611 PTS system sugar-specific permease component AL538_RS20110 PF08220 DeoR-like helix-turn-helix domain AL538_RS20110 PF00455 DeoR C terminal sensor domain AL538_RS20120 PF00194 Eukaryotic-type carbonic anhydrase AL538_RS20130 PF02492 CobW/HypB/UreG, nucleotide-binding domain AL538_RS20135 PF12833 Helix-turn-helix domain AL538_RS20140 PF01272 Transcription elongation factor, GreA/GreB, C-term AL538_RS20140 PF14760 Rnk N-terminus AL538_RS20145 PF01042 Endoribonuclease L-PSP AL538_RS20165 PF01032 FecCD transport family AL538_RS20175 PF00005 ABC transporter AL538_RS20180 PF12833 Helix-turn-helix domain AL538_RS20190 PF02492 CobW/HypB/UreG, nucleotide-binding domain AL538_RS20195 PF01730 UreF AL538_RS20200 PF02814 UreE urease accessory protein, N-terminal domain AL538_RS20200 PF05194 UreE urease accessory protein, C-terminal domain AL538_RS20205 PF01979 Amidohydrolase family AL538_RS20205 PF00449 Urease alpha-subunit, N-terminal domain AL538_RS20210 PF00699 Urease beta subunit AL538_RS20215 PF00547 Urease, gamma subunit AL538_RS20220 PF01774 UreD urease accessory protein AL538_RS20235 PF02386 Cation transport protein AL538_RS20240 PF12833 Helix-turn-helix domain AL538_RS20260 PF03616 Sodium/glutamate symporter AL538_RS20265 PF00155 Aminotransferase class I and II AL538_RS20265 PF00392 Bacterial regulatory proteins, gntR family AL538_RS20270 PF00005 ABC transporter AL538_RS20285 PF03616 Sodium/glutamate symporter AL538_RS20290 PF00132 Bacterial transferase hexapeptide (six repeats) AL538_RS20305 PF00672 HAMP domain AL538_RS20305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS20305 PF17200 Single Cache domain 2 AL538_RS20310 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AL538_RS20315 PF04397 LytTr DNA-binding domain AL538_RS20315 PF00072 Response regulator receiver domain AL538_RS20320 PF13492 GAF domain AL538_RS20320 PF07694 5TMR of 5TMR-LYT AL538_RS20320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS20320 PF06580 Histidine kinase AL538_RS20340 PF00005 ABC transporter AL538_RS20350 PF03466 LysR substrate binding domain AL538_RS20350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS20355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL538_RS20370 PF01098 Cell cycle protein AL538_RS20375 PF01709 Transcriptional regulator AL538_RS20385 PF00072 Response regulator receiver domain AL538_RS20385 PF17149 Periplasmic sensor domain found in signal transduction proteins AL538_RS20385 PF01627 Hpt domain AL538_RS20385 PF00672 HAMP domain AL538_RS20385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS20385 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS20395 PF08719 Domain of unknown function (DUF1768) AL538_RS20395 PF00925 GTP cyclohydrolase II AL538_RS20405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL538_RS20405 PF00005 ABC transporter AL538_RS20410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL538_RS20410 PF00005 ABC transporter AL538_RS20425 PF13614 AAA domain AL538_RS20425 PF18607 ParA helix turn helix domain AL538_RS20430 PF08775 ParB family AL538_RS20430 PF02195 ParB-like nuclease domain AL538_RS20435 PF13718 GNAT acetyltransferase 2 AL538_RS20435 PF05127 Helicase AL538_RS20440 PF03544 Gram-negative bacterial TonB protein C-terminal AL538_RS20445 PF02472 Biopolymer transport protein ExbD/TolR AL538_RS20450 PF01618 MotA/TolQ/ExbB proton channel family AL538_RS20485 PF04542 Sigma-70 region 2 AL538_RS20485 PF08281 Sigma-70, region 4 AL538_RS20495 PF00132 Bacterial transferase hexapeptide (six repeats) AL538_RS20500 PF03466 LysR substrate binding domain AL538_RS20500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS20510 PF00246 Zinc carboxypeptidase AL538_RS20515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL538_RS20520 PF03358 NADPH-dependent FMN reductase AL538_RS20530 PF00005 ABC transporter AL538_RS20530 PF00664 ABC transporter transmembrane region AL538_RS20530 PF03412 Peptidase C39 family AL538_RS20545 PF00529 HlyD membrane-fusion protein of T1SS AL538_RS20550 PF00072 Response regulator receiver domain AL538_RS20550 PF02954 Bacterial regulatory protein, Fis family AL538_RS20550 PF00158 Sigma-54 interaction domain AL538_RS20555 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS20555 PF02743 Cache domain AL538_RS20555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS20560 PF01243 Pyridoxamine 5'-phosphate oxidase AL538_RS20560 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AL538_RS20570 PF12833 Helix-turn-helix domain AL538_RS20575 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AL538_RS20575 PF00171 Aldehyde dehydrogenase family AL538_RS20575 PF01619 Proline dehydrogenase AL538_RS20575 PF14850 DNA-binding domain of Proline dehydrogenase AL538_RS20585 PF00474 Sodium:solute symporter family AL538_RS20630 PF01037 Lrp/AsnC ligand binding domain AL538_RS20640 PF00664 ABC transporter transmembrane region AL538_RS20640 PF00005 ABC transporter AL538_RS20655 PF00478 IMP dehydrogenase / GMP reductase domain AL538_RS20655 PF00571 CBS domain AL538_RS20665 PF13186 Iron-sulfur cluster-binding domain AL538_RS20665 PF04055 Radical SAM superfamily AL538_RS20675 PF07470 Glycosyl Hydrolase Family 88 AL538_RS20680 PF00474 Sodium:solute symporter family AL538_RS20685 PF04962 KduI/IolB family AL538_RS20695 PF00294 pfkB family carbohydrate kinase AL538_RS20700 PF01081 KDPG and KHG aldolase AL538_RS20715 PF00884 Sulfatase AL538_RS20715 PF16347 Domain of unknown function (DUF4976) AL538_RS20720 PF02656 Domain of unknown function (DUF202) AL538_RS20735 PF01042 Endoribonuclease L-PSP AL538_RS20740 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AL538_RS20740 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AL538_RS20745 PF04371 Porphyromonas-type peptidyl-arginine deiminase AL538_RS20750 PF13520 Amino acid permease AL538_RS20755 PF00696 Amino acid kinase family AL538_RS20760 PF00440 Bacterial regulatory proteins, tetR family AL538_RS20765 PF10688 Bacterial inner membrane protein AL538_RS20770 PF01081 KDPG and KHG aldolase AL538_RS20775 PF00294 pfkB family carbohydrate kinase AL538_RS20780 PF02614 Glucuronate isomerase AL538_RS20785 PF08125 Mannitol dehydrogenase C-terminal domain AL538_RS20785 PF01232 Mannitol dehydrogenase Rossmann domain AL538_RS20790 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AL538_RS20795 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AL538_RS20800 PF03480 Bacterial extracellular solute-binding protein, family 7 AL538_RS20805 PF07729 FCD domain AL538_RS20805 PF00392 Bacterial regulatory proteins, gntR family AL538_RS20810 PF03786 D-mannonate dehydratase (UxuA) AL538_RS20815 PF13443 Cro/C1-type HTH DNA-binding domain AL538_RS20830 PF00155 Aminotransferase class I and II AL538_RS20835 PF04542 Sigma-70 region 2 AL538_RS20835 PF08281 Sigma-70, region 4 AL538_RS20840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS20840 PF03466 LysR substrate binding domain AL538_RS20855 PF00271 Helicase conserved C-terminal domain AL538_RS20855 PF00270 DEAD/DEAH box helicase AL538_RS20860 PF06629 MltA-interacting protein MipA AL538_RS20870 PF13673 Acetyltransferase (GNAT) domain AL538_RS20875 PF03475 3-alpha domain AL538_RS20875 PF03473 MOSC domain AL538_RS20890 PF13404 AsnC-type helix-turn-helix domain AL538_RS20890 PF01037 Lrp/AsnC ligand binding domain AL538_RS20895 PF01810 LysE type translocator AL538_RS20900 PF06445 GyrI-like small molecule binding domain AL538_RS20910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS20910 PF02743 Cache domain AL538_RS20910 PF00672 HAMP domain AL538_RS20915 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL538_RS20940 PF07148 Maltose operon periplasmic protein precursor (MalM) AL538_RS20950 PF01547 Bacterial extracellular solute-binding protein AL538_RS20955 PF16657 Maltogenic Amylase, C-terminal domain AL538_RS20955 PF02903 Alpha amylase, N-terminal ig-like domain AL538_RS20955 PF00128 Alpha amylase, catalytic domain AL538_RS20960 PF00128 Alpha amylase, catalytic domain AL538_RS20960 PF16657 Maltogenic Amylase, C-terminal domain AL538_RS20965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS20965 PF03466 LysR substrate binding domain AL538_RS21015 PF13192 Thioredoxin domain AL538_RS21015 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL538_RS21020 PF00578 AhpC/TSA family AL538_RS21020 PF10417 C-terminal domain of 1-Cys peroxiredoxin AL538_RS21030 PF01047 MarR family AL538_RS21035 PF02566 OsmC-like protein AL538_RS21050 PF17200 Single Cache domain 2 AL538_RS21050 PF00672 HAMP domain AL538_RS21050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS21055 PF05193 Peptidase M16 inactive domain AL538_RS21055 PF00675 Insulinase (Peptidase family M16) AL538_RS21080 PF04225 Opacity-associated protein A LysM-like domain AL538_RS21080 PF01551 Peptidase family M23 AL538_RS21090 PF13533 Biotin-lipoyl like AL538_RS21100 PF00440 Bacterial regulatory proteins, tetR family AL538_RS21100 PF08360 QacR-like protein, C-terminal region AL538_RS21105 PF00005 ABC transporter AL538_RS21110 PF01032 FecCD transport family AL538_RS21115 PF01032 FecCD transport family AL538_RS21120 PF01497 Periplasmic binding protein AL538_RS21125 PF03466 LysR substrate binding domain AL538_RS21125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS21130 PF00593 TonB dependent receptor AL538_RS21130 PF07715 TonB-dependent Receptor Plug Domain AL538_RS21135 PF00892 EamA-like transporter family AL538_RS21150 PF07690 Major Facilitator Superfamily AL538_RS21175 PF17179 4Fe-4S dicluster domain AL538_RS21180 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AL538_RS21180 PF14824 Sirohaem biosynthesis protein central AL538_RS21180 PF10414 Sirohaem synthase dimerisation region AL538_RS21185 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS21190 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AL538_RS21190 PF00128 Alpha amylase, catalytic domain AL538_RS21195 PF02264 LamB porin AL538_RS21210 PF02903 Alpha amylase, N-terminal ig-like domain AL538_RS21210 PF00128 Alpha amylase, catalytic domain AL538_RS21215 PF04231 Endonuclease I AL538_RS21220 PF00155 Aminotransferase class I and II AL538_RS21220 PF00392 Bacterial regulatory proteins, gntR family AL538_RS21265 PF00583 Acetyltransferase (GNAT) family AL538_RS21295 PF03264 NapC/NirT cytochrome c family, N-terminal region AL538_RS21300 PF01568 Molydopterin dinucleotide binding domain AL538_RS21300 PF18364 Molybdopterin oxidoreductase N-terminal domain AL538_RS21300 PF00384 Molybdopterin oxidoreductase AL538_RS21305 PF01569 PAP2 superfamily AL538_RS21310 PF02581 Thiamine monophosphate synthase AL538_RS21315 PF02110 Hydroxyethylthiazole kinase family AL538_RS21320 PF03070 TENA/THI-4/PQQC family AL538_RS21325 PF09084 NMT1/THI5 like AL538_RS21330 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS21335 PF00005 ABC transporter AL538_RS21340 PF08543 Phosphomethylpyrimidine kinase AL538_RS21345 PF01523 Putative modulator of DNA gyrase AL538_RS21350 PF01523 Putative modulator of DNA gyrase AL538_RS21355 PF04013 Putative SAM-dependent RNA methyltransferase AL538_RS21465 PF00271 Helicase conserved C-terminal domain AL538_RS21470 PF10928 Protein of unknown function (DUF2810) AL538_RS21475 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AL538_RS21475 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AL538_RS21485 PF03009 Glycerophosphoryl diester phosphodiesterase family AL538_RS21490 PF00056 lactate/malate dehydrogenase, NAD binding domain AL538_RS21490 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AL538_RS21495 PF00486 Transcriptional regulatory protein, C terminal AL538_RS21495 PF00072 Response regulator receiver domain AL538_RS21500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS21500 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS21500 PF00672 HAMP domain AL538_RS21500 PF16750 Sensor domain of 2-component histidine kinase AL538_RS21505 PF00593 TonB dependent receptor AL538_RS21505 PF07715 TonB-dependent Receptor Plug Domain AL538_RS21515 PF01618 MotA/TolQ/ExbB proton channel family AL538_RS21520 PF01618 MotA/TolQ/ExbB proton channel family AL538_RS21525 PF02472 Biopolymer transport protein ExbD/TolR AL538_RS21570 PF01297 Zinc-uptake complex component A periplasmic AL538_RS21575 PF00005 ABC transporter AL538_RS21580 PF00950 ABC 3 transport family AL538_RS21595 PF00326 Prolyl oligopeptidase family AL538_RS21595 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AL538_RS21600 PF07690 Major Facilitator Superfamily AL538_RS21605 PF00491 Arginase family AL538_RS21610 PF17944 Arginine decarboxylase C-terminal helical extension AL538_RS21610 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AL538_RS21610 PF17810 Arginine decarboxylase helical bundle domain AL538_RS21615 PF00753 Metallo-beta-lactamase superfamily AL538_RS21620 PF08443 RimK-like ATP-grasp domain AL538_RS21620 PF18030 RimK PreATP-grasp domain AL538_RS21625 PF08443 RimK-like ATP-grasp domain AL538_RS21625 PF18030 RimK PreATP-grasp domain AL538_RS21640 PF12706 Beta-lactamase superfamily domain AL538_RS21650 PF03466 LysR substrate binding domain AL538_RS21650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS21675 PF00232 Glycosyl hydrolase family 1 AL538_RS21680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS21680 PF02743 Cache domain AL538_RS21680 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS21685 PF02954 Bacterial regulatory protein, Fis family AL538_RS21685 PF00072 Response regulator receiver domain AL538_RS21685 PF00158 Sigma-54 interaction domain AL538_RS21690 PF05525 Branched-chain amino acid transport protein AL538_RS21715 PF01266 FAD dependent oxidoreductase AL538_RS21725 PF03116 NQR2, RnfD, RnfE family AL538_RS21730 PF01212 Beta-eliminating lyase AL538_RS21750 PF01773 Na+ dependent nucleoside transporter N-terminus AL538_RS21750 PF07662 Na+ dependent nucleoside transporter C-terminus AL538_RS21750 PF07670 Nucleoside recognition AL538_RS21755 PF00483 Nucleotidyl transferase AL538_RS21775 PF05230 MASE2 domain AL538_RS21775 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS21790 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS21795 PF03441 FAD binding domain of DNA photolyase AL538_RS21795 PF00875 DNA photolyase AL538_RS21800 PF04244 Deoxyribodipyrimidine photo-lyase-related protein AL538_RS21815 PF01641 SelR domain AL538_RS21815 PF01625 Peptide methionine sulfoxide reductase AL538_RS21820 PF02566 OsmC-like protein AL538_RS21825 PF12464 Maltose acetyltransferase AL538_RS21825 PF14602 Hexapeptide repeat of succinyl-transferase AL538_RS21865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS21865 PF03466 LysR substrate binding domain AL538_RS21870 PF13419 Haloacid dehalogenase-like hydrolase AL538_RS21905 PF00657 GDSL-like Lipase/Acylhydrolase AL538_RS21910 PF05922 Peptidase inhibitor I9 AL538_RS21910 PF00082 Subtilase family AL538_RS21920 PF03611 PTS system sugar-specific permease component AL538_RS21930 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AL538_RS21935 PF00356 Bacterial regulatory proteins, lacI family AL538_RS21940 PF13419 Haloacid dehalogenase-like hydrolase AL538_RS21945 PF00202 Aminotransferase class-III AL538_RS21950 PF00266 Aminotransferase class-V AL538_RS21960 PF00005 ABC transporter AL538_RS21965 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS21970 PF00392 Bacterial regulatory proteins, gntR family AL538_RS21970 PF07702 UTRA domain AL538_RS21985 PF04393 Protein of unknown function (DUF535) AL538_RS21995 PF01266 FAD dependent oxidoreductase AL538_RS22000 PF18027 Cytosolic carboxypeptidase N-terminal domain AL538_RS22000 PF00246 Zinc carboxypeptidase AL538_RS22005 PF01389 OmpA-like transmembrane domain AL538_RS22005 PF00691 OmpA family AL538_RS22010 PF03466 LysR substrate binding domain AL538_RS22010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS22020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS22020 PF03466 LysR substrate binding domain AL538_RS22030 PF01566 Natural resistance-associated macrophage protein AL538_RS22035 PF00854 POT family AL538_RS22040 PF03313 Serine dehydratase alpha chain AL538_RS22040 PF03315 Serine dehydratase beta chain AL538_RS22065 PF01476 LysM domain AL538_RS22065 PF01464 Transglycosylase SLT domain AL538_RS22085 PF00460 Flagella basal body rod protein AL538_RS22090 PF00460 Flagella basal body rod protein AL538_RS22090 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL538_RS22095 PF13860 FlgD Ig-like domain AL538_RS22095 PF13861 FlgD Tudor-like domain AL538_RS22095 PF03963 Flagellar hook capping protein - N-terminal region AL538_RS22100 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL538_RS22100 PF07559 Flagellar basal body protein FlaE AL538_RS22100 PF00460 Flagella basal body rod protein AL538_RS22105 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL538_RS22105 PF00460 Flagella basal body rod protein AL538_RS22110 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL538_RS22110 PF00460 Flagella basal body rod protein AL538_RS22115 PF02107 Flagellar L-ring protein AL538_RS22120 PF02119 Flagellar P-ring protein AL538_RS22125 PF10135 Rod binding protein AL538_RS22125 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AL538_RS22130 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL538_RS22130 PF00460 Flagella basal body rod protein AL538_RS22135 PF00669 Bacterial flagellin N-terminal helical region AL538_RS22155 PF01070 FMN-dependent dehydrogenase AL538_RS22170 PF03471 Transporter associated domain AL538_RS22170 PF03741 Integral membrane protein TerC family AL538_RS22175 PF18500 CadC C-terminal domain 1 AL538_RS22175 PF00486 Transcriptional regulatory protein, C terminal AL538_RS22190 PF08241 Methyltransferase domain AL538_RS22210 PF03239 Iron permease FTR1 family AL538_RS22215 PF10634 Fe2+ transport protein AL538_RS22225 PF12704 MacB-like periplasmic core domain AL538_RS22225 PF02687 FtsX-like permease family AL538_RS22225 PF00005 ABC transporter AL538_RS22235 PF00005 ABC transporter AL538_RS22240 PF00578 AhpC/TSA family AL538_RS22250 PF04205 FMN-binding domain AL538_RS22290 PF02796 Helix-turn-helix domain of resolvase AL538_RS22290 PF00239 Resolvase, N terminal domain AL538_RS22310 PF08000 Bacterial PH domain AL538_RS22335 PF13677 Membrane MotB of proton-channel complex MotA/MotB AL538_RS22335 PF00691 OmpA family AL538_RS22340 PF01618 MotA/TolQ/ExbB proton channel family AL538_RS22345 PF04545 Sigma-70, region 4 AL538_RS22345 PF04542 Sigma-70 region 2 AL538_RS22350 PF03748 Flagellar basal body-associated protein FliL AL538_RS22365 PF02561 Flagellar protein FliS AL538_RS22370 PF02465 Flagellar hook-associated protein 2 N-terminus AL538_RS22370 PF07196 Flagellin hook IN motif AL538_RS22370 PF07195 Flagellar hook-associated protein 2 C-terminus AL538_RS22380 PF00669 Bacterial flagellin N-terminal helical region AL538_RS22380 PF00700 Bacterial flagellin C-terminal helical region AL538_RS22390 PF00771 FHIPEP family AL538_RS22395 PF01312 FlhB HrpN YscU SpaS Family AL538_RS22400 PF01311 Bacterial export proteins, family 1 AL538_RS22405 PF01313 Bacterial export proteins, family 3 AL538_RS22410 PF00813 FliP family AL538_RS22415 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AL538_RS22430 PF00158 Sigma-54 interaction domain AL538_RS22430 PF00072 Response regulator receiver domain AL538_RS22430 PF02954 Bacterial regulatory protein, Fis family AL538_RS22435 PF02049 Flagellar hook-basal body complex protein FliE AL538_RS22440 PF01514 Secretory protein of YscJ/FliF family AL538_RS22440 PF08345 Flagellar M-ring protein C-terminal AL538_RS22445 PF01706 FliG C-terminal domain AL538_RS22445 PF14841 FliG middle domain AL538_RS22445 PF14842 FliG N-terminal domain AL538_RS22455 PF18269 T3SS EscN ATPase C-terminal domain AL538_RS22455 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AL538_RS22465 PF00563 EAL domain AL538_RS22465 PF05231 MASE1 AL538_RS22475 PF03466 LysR substrate binding domain AL538_RS22475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS22510 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL538_RS22515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS22515 PF03466 LysR substrate binding domain AL538_RS22535 PF00486 Transcriptional regulatory protein, C terminal AL538_RS22535 PF00072 Response regulator receiver domain AL538_RS22540 PF13426 PAS domain AL538_RS22540 PF08448 PAS fold AL538_RS22540 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS22540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS22540 PF00072 Response regulator receiver domain AL538_RS22545 PF00266 Aminotransferase class-V AL538_RS22550 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL538_RS22555 PF03707 Bacterial signalling protein N terminal repeat AL538_RS22555 PF00563 EAL domain AL538_RS22555 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS22560 PF00155 Aminotransferase class I and II AL538_RS22565 PF08240 Alcohol dehydrogenase GroES-like domain AL538_RS22565 PF00107 Zinc-binding dehydrogenase AL538_RS22595 PF12161 HsdM N-terminal domain AL538_RS22595 PF02384 N-6 DNA Methylase AL538_RS22600 PF01420 Type I restriction modification DNA specificity domain AL538_RS22605 PF01367 5'-3' exonuclease, C-terminal SAM fold AL538_RS22605 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AL538_RS22605 PF00476 DNA polymerase family A AL538_RS22620 PF00271 Helicase conserved C-terminal domain AL538_RS22620 PF00176 SNF2 family N-terminal domain AL538_RS22640 PF00293 NUDIX domain AL538_RS22650 PF11008 Protein of unknown function (DUF2846) AL538_RS22655 PF00194 Eukaryotic-type carbonic anhydrase AL538_RS22660 PF00376 MerR family regulatory protein AL538_RS22660 PF09278 MerR, DNA binding AL538_RS22685 PF13091 PLD-like domain AL538_RS22690 PF13533 Biotin-lipoyl like AL538_RS22695 PF00873 AcrB/AcrD/AcrF family AL538_RS22705 PF00873 AcrB/AcrD/AcrF family AL538_RS22745 PF13193 AMP-binding enzyme C-terminal domain AL538_RS22745 PF00501 AMP-binding enzyme AL538_RS22750 PF02028 BCCT, betaine/carnitine/choline family transporter AL538_RS22755 PF00703 Glycosyl hydrolases family 2 AL538_RS22755 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AL538_RS22755 PF02837 Glycosyl hydrolases family 2, sugar binding domain AL538_RS22755 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 AL538_RS22760 PF00196 Bacterial regulatory proteins, luxR family AL538_RS22770 PF00563 EAL domain AL538_RS22770 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS22770 PF03707 Bacterial signalling protein N terminal repeat AL538_RS22785 PF03616 Sodium/glutamate symporter AL538_RS22790 PF02600 Disulfide bond formation protein DsbB AL538_RS22795 PF02321 Outer membrane efflux protein AL538_RS22800 PF00873 AcrB/AcrD/AcrF family AL538_RS22805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL538_RS22810 PF03466 LysR substrate binding domain AL538_RS22810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS22825 PF00579 tRNA synthetases class I (W and Y) AL538_RS22830 PF00072 Response regulator receiver domain AL538_RS22830 PF00196 Bacterial regulatory proteins, luxR family AL538_RS22840 PF00391 PEP-utilising enzyme, mobile domain AL538_RS22840 PF02896 PEP-utilising enzyme, TIM barrel domain AL538_RS22840 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AL538_RS22845 PF03618 Kinase/pyrophosphorylase AL538_RS22850 PF17763 Glutaminase/Asparaginase C-terminal domain AL538_RS22850 PF00710 Asparaginase, N-terminal AL538_RS22855 PF13185 GAF domain AL538_RS22855 PF00563 EAL domain AL538_RS22855 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS22860 PF00709 Adenylosuccinate synthetase AL538_RS22865 PF03466 LysR substrate binding domain AL538_RS22865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS22885 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) AL538_RS22900 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AL538_RS22910 PF07690 Major Facilitator Superfamily AL538_RS22920 PF03466 LysR substrate binding domain AL538_RS22920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS22940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS22940 PF03466 LysR substrate binding domain AL538_RS22950 PF00271 Helicase conserved C-terminal domain AL538_RS22950 PF00270 DEAD/DEAH box helicase AL538_RS22960 PF00535 Glycosyl transferase family 2 AL538_RS22970 PF03099 Biotin/lipoate A/B protein ligase family AL538_RS22990 PF00155 Aminotransferase class I and II AL538_RS22995 PF01497 Periplasmic binding protein AL538_RS22995 PF12833 Helix-turn-helix domain AL538_RS23000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS23000 PF03466 LysR substrate binding domain AL538_RS23010 PF13419 Haloacid dehalogenase-like hydrolase AL538_RS23015 PF00158 Sigma-54 interaction domain AL538_RS23015 PF01590 GAF domain AL538_RS23020 PF00753 Metallo-beta-lactamase superfamily AL538_RS23020 PF00301 Rubredoxin AL538_RS23020 PF00258 Flavodoxin AL538_RS23025 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL538_RS23025 PF18113 Rubredoxin binding C-terminal domain AL538_RS23040 PF11742 Protein of unknown function (DUF3302) AL538_RS23045 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL538_RS23045 PF00529 HlyD membrane-fusion protein of T1SS AL538_RS23050 PF03466 LysR substrate binding domain AL538_RS23050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS23060 PF01238 Phosphomannose isomerase type I AL538_RS23065 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AL538_RS23065 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AL538_RS23070 PF12833 Helix-turn-helix domain AL538_RS23080 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AL538_RS23090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS23090 PF03466 LysR substrate binding domain AL538_RS23100 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AL538_RS23100 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AL538_RS23105 PF00199 Catalase AL538_RS23105 PF06628 Catalase-related immune-responsive AL538_RS23115 PF00107 Zinc-binding dehydrogenase AL538_RS23115 PF16884 N-terminal domain of oxidoreductase AL538_RS23120 PF16925 Tetracyclin repressor-like, C-terminal domain AL538_RS23120 PF00440 Bacterial regulatory proteins, tetR family AL538_RS23125 PF04266 ASCH domain AL538_RS23155 PF13439 Glycosyltransferase Family 4 AL538_RS23155 PF00534 Glycosyl transferases group 1 AL538_RS23165 PF02706 Chain length determinant protein AL538_RS23165 PF13807 G-rich domain on putative tyrosine kinase AL538_RS23165 PF13614 AAA domain AL538_RS23180 PF02397 Bacterial sugar transferase AL538_RS23185 PF00005 ABC transporter AL538_RS23185 PF08402 TOBE domain AL538_RS23195 PF01547 Bacterial extracellular solute-binding protein AL538_RS23200 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS23200 PF14785 Maltose transport system permease protein MalF P2 domain AL538_RS23205 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS23250 PF01464 Transglycosylase SLT domain AL538_RS23250 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AL538_RS23275 PF05661 Protein of unknown function (DUF808) AL538_RS23280 PF01979 Amidohydrolase family AL538_RS23290 PF01679 Proteolipid membrane potential modulator AL538_RS23295 PF00111 2Fe-2S iron-sulfur cluster binding domain AL538_RS23295 PF03476 MOSC N-terminal beta barrel domain AL538_RS23295 PF00111 2Fe-2S iron-sulfur cluster binding domain AL538_RS23295 PF03473 MOSC domain AL538_RS23295 PF03473 MOSC domain AL538_RS23295 PF03476 MOSC N-terminal beta barrel domain AL538_RS23300 PF02540 NAD synthase AL538_RS23305 PF01467 Cytidylyltransferase-like AL538_RS23345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS23345 PF03466 LysR substrate binding domain AL538_RS23365 PF07690 Major Facilitator Superfamily AL538_RS23375 PF00857 Isochorismatase family AL538_RS23380 PF01965 DJ-1/PfpI family AL538_RS23380 PF12833 Helix-turn-helix domain AL538_RS23385 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AL538_RS23390 PF00884 Sulfatase AL538_RS23390 PF08019 Phosphoethanolamine transferase EptA/EptB AL538_RS23395 PF01219 Prokaryotic diacylglycerol kinase AL538_RS23405 PF00672 HAMP domain AL538_RS23405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS23405 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS23410 PF00072 Response regulator receiver domain AL538_RS23410 PF00486 Transcriptional regulatory protein, C terminal AL538_RS23415 PF02028 BCCT, betaine/carnitine/choline family transporter AL538_RS23420 PF13378 Enolase C-terminal domain-like AL538_RS23420 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AL538_RS23425 PF00890 FAD binding domain AL538_RS23425 PF04205 FMN-binding domain AL538_RS23430 PF07729 FCD domain AL538_RS23430 PF00392 Bacterial regulatory proteins, gntR family AL538_RS23435 PF00114 Pilin (bacterial filament) AL538_RS23435 PF07963 Prokaryotic N-terminal methylation motif AL538_RS23440 PF00106 short chain dehydrogenase AL538_RS23455 PF01323 DSBA-like thioredoxin domain AL538_RS23470 PF00255 Glutathione peroxidase AL538_RS23475 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AL538_RS23500 PF01966 HD domain AL538_RS23515 PF07969 Amidohydrolase family AL538_RS23520 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AL538_RS23525 PF01769 Divalent cation transporter AL538_RS23525 PF03448 MgtE intracellular N domain AL538_RS23525 PF00571 CBS domain AL538_RS23530 PF03109 ABC1 family AL538_RS23535 PF00529 HlyD membrane-fusion protein of T1SS AL538_RS23535 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL538_RS23560 PF00486 Transcriptional regulatory protein, C terminal AL538_RS23560 PF00072 Response regulator receiver domain AL538_RS23565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS23565 PF00672 HAMP domain AL538_RS23565 PF16527 Two-component sensor protein CpxA, periplasmic domain AL538_RS23565 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS23575 PF00392 Bacterial regulatory proteins, gntR family AL538_RS23575 PF00155 Aminotransferase class I and II AL538_RS23580 PF13520 Amino acid permease AL538_RS23585 PF01037 Lrp/AsnC ligand binding domain AL538_RS23585 PF13404 AsnC-type helix-turn-helix domain AL538_RS23595 PF03466 LysR substrate binding domain AL538_RS23595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS23610 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AL538_RS23610 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AL538_RS23615 PF01627 Hpt domain AL538_RS23615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS23615 PF00072 Response regulator receiver domain AL538_RS23615 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AL538_RS23615 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS23615 PF00672 HAMP domain AL538_RS23620 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AL538_RS23625 PF01554 MatE AL538_RS23630 PF04363 Protein of unknown function (DUF496) AL538_RS23640 PF04337 Protein of unknown function, DUF480 AL538_RS23645 PF01541 GIY-YIG catalytic domain AL538_RS23650 PF13407 Periplasmic binding protein domain AL538_RS23655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS23655 PF09308 LuxQ, periplasmic AL538_RS23655 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS23655 PF00072 Response regulator receiver domain AL538_RS23670 PF01037 Lrp/AsnC ligand binding domain AL538_RS23700 PF02355 Protein export membrane protein AL538_RS23700 PF07549 SecD/SecF GG Motif AL538_RS23700 PF13721 SecD export protein N-terminal TM region AL538_RS23705 PF07549 SecD/SecF GG Motif AL538_RS23705 PF02355 Protein export membrane protein AL538_RS23715 PF01810 LysE type translocator AL538_RS23720 PF00106 short chain dehydrogenase AL538_RS23725 PF02803 Thiolase, C-terminal domain AL538_RS23725 PF00108 Thiolase, N-terminal domain AL538_RS23735 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus AL538_RS23735 PF00561 alpha/beta hydrolase fold AL538_RS23750 PF03264 NapC/NirT cytochrome c family, N-terminal region AL538_RS23755 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) AL538_RS23760 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AL538_RS23760 PF01568 Molydopterin dinucleotide binding domain AL538_RS23760 PF00384 Molybdopterin oxidoreductase AL538_RS23770 PF12838 4Fe-4S dicluster domain AL538_RS23770 PF13187 4Fe-4S dicluster domain AL538_RS23775 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AL538_RS23775 PF07730 Histidine kinase AL538_RS23775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS23775 PF00672 HAMP domain AL538_RS23780 PF00196 Bacterial regulatory proteins, luxR family AL538_RS23780 PF00072 Response regulator receiver domain AL538_RS23795 PF07687 Peptidase dimerisation domain AL538_RS23795 PF01546 Peptidase family M20/M25/M40 AL538_RS23800 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AL538_RS23805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL538_RS23810 PF00873 AcrB/AcrD/AcrF family AL538_RS23815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS23815 PF00672 HAMP domain AL538_RS23815 PF12729 Four helix bundle sensory module for signal transduction AL538_RS23820 PF00472 RF-1 domain AL538_RS23825 PF13419 Haloacid dehalogenase-like hydrolase AL538_RS23830 PF00196 Bacterial regulatory proteins, luxR family AL538_RS23830 PF00072 Response regulator receiver domain AL538_RS23855 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AL538_RS23855 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AL538_RS23865 PF00691 OmpA family AL538_RS23865 PF05736 OprF membrane domain AL538_RS23885 PF00313 'Cold-shock' DNA-binding domain AL538_RS23890 PF03889 Alternative ribosome-rescue factor A AL538_RS23900 PF08448 PAS fold AL538_RS23900 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS23915 PF02687 FtsX-like permease family AL538_RS23915 PF00005 ABC transporter AL538_RS23915 PF12704 MacB-like periplasmic core domain AL538_RS23920 PF12704 MacB-like periplasmic core domain AL538_RS23920 PF02687 FtsX-like permease family AL538_RS23920 PF00005 ABC transporter AL538_RS23930 PF04542 Sigma-70 region 2 AL538_RS23930 PF04539 Sigma-70 region 3 AL538_RS23930 PF04545 Sigma-70, region 4 AL538_RS23930 PF00140 Sigma-70 factor, region 1.2 AL538_RS23940 PF00005 ABC transporter AL538_RS23945 PF00005 ABC transporter AL538_RS23945 PF00664 ABC transporter transmembrane region AL538_RS23950 PF02321 Outer membrane efflux protein AL538_RS23955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS23955 PF00072 Response regulator receiver domain AL538_RS23960 PF13533 Biotin-lipoyl like AL538_RS23980 PF00672 HAMP domain AL538_RS23980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS23980 PF17200 Single Cache domain 2 AL538_RS23985 PF00210 Ferritin-like domain AL538_RS23995 PF17676 LD-carboxypeptidase C-terminal domain AL538_RS23995 PF02016 LD-carboxypeptidase N-terminal domain AL538_RS24000 PF07995 Glucose / Sorbosone dehydrogenase AL538_RS24005 PF00465 Iron-containing alcohol dehydrogenase AL538_RS24020 PF00892 EamA-like transporter family AL538_RS24030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS24030 PF03466 LysR substrate binding domain AL538_RS24040 PF13193 AMP-binding enzyme C-terminal domain AL538_RS24040 PF00501 AMP-binding enzyme AL538_RS24050 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AL538_RS24055 PF01329 Pterin 4 alpha carbinolamine dehydratase AL538_RS24090 PF12843 Putative quorum-sensing-regulated virulence factor AL538_RS24125 PF12805 FUSC-like inner membrane protein yccS AL538_RS24130 PF13361 UvrD-like helicase C-terminal domain AL538_RS24130 PF12462 DNA helicase IV / RNA helicase N terminal AL538_RS24130 PF00580 UvrD/REP helicase N-terminal domain AL538_RS24135 PF02142 MGS-like domain AL538_RS24140 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AL538_RS24145 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS24145 PF00672 HAMP domain AL538_RS24145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS24145 PF00072 Response regulator receiver domain AL538_RS24145 PF01627 Hpt domain AL538_RS24165 PF16750 Sensor domain of 2-component histidine kinase AL538_RS24165 PF00672 HAMP domain AL538_RS24165 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS24165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS24170 PF00072 Response regulator receiver domain AL538_RS24170 PF00486 Transcriptional regulatory protein, C terminal AL538_RS24175 PF00884 Sulfatase AL538_RS24180 PF00884 Sulfatase AL538_RS24190 PF03466 LysR substrate binding domain AL538_RS24190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS24195 PF00884 Sulfatase AL538_RS24200 PF04055 Radical SAM superfamily AL538_RS24200 PF13186 Iron-sulfur cluster-binding domain AL538_RS24205 PF07726 ATPase family associated with various cellular activities (AAA) AL538_RS24205 PF17863 AAA lid domain AL538_RS24220 PF00092 von Willebrand factor type A domain AL538_RS24240 PF00119 ATP synthase A chain AL538_RS24245 PF00137 ATP synthase subunit C AL538_RS24250 PF00430 ATP synthase B/B' CF(0) AL538_RS24255 PF00213 ATP synthase delta (OSCP) subunit AL538_RS24260 PF02874 ATP synthase alpha/beta family, beta-barrel domain AL538_RS24260 PF00306 ATP synthase alpha/beta chain, C terminal domain AL538_RS24260 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AL538_RS24265 PF00231 ATP synthase AL538_RS24270 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AL538_RS24270 PF02874 ATP synthase alpha/beta family, beta-barrel domain AL538_RS24275 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AL538_RS24275 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AL538_RS24280 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AL538_RS24280 PF01872 RibD C-terminal domain AL538_RS24285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS24285 PF03466 LysR substrate binding domain AL538_RS24290 PF00781 Diacylglycerol kinase catalytic domain AL538_RS24295 PF04076 Bacterial OB fold (BOF) protein AL538_RS24310 PF03781 Sulfatase-modifying factor enzyme 1 AL538_RS24315 PF13186 Iron-sulfur cluster-binding domain AL538_RS24315 PF04055 Radical SAM superfamily AL538_RS24325 PF18081 Fanconi anemia-associated nuclease SAP domain AL538_RS24325 PF08774 VRR-NUC domain AL538_RS24340 PF01435 Peptidase family M48 AL538_RS24345 PF04011 LemA family AL538_RS24350 PF03606 C4-dicarboxylate anaerobic carrier AL538_RS24370 PF00072 Response regulator receiver domain AL538_RS24370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS24375 PF00155 Aminotransferase class I and II AL538_RS24380 PF01926 50S ribosome-binding GTPase AL538_RS24385 PF08525 Opacity-associated protein A N-terminal motif AL538_RS24385 PF01476 LysM domain AL538_RS24385 PF01551 Peptidase family M23 AL538_RS24410 PF01590 GAF domain AL538_RS24410 PF02954 Bacterial regulatory protein, Fis family AL538_RS24410 PF00158 Sigma-54 interaction domain AL538_RS24415 PF10431 C-terminal, D2-small domain, of ClpB protein AL538_RS24415 PF17871 AAA lid domain AL538_RS24415 PF07724 AAA domain (Cdc48 subfamily) AL538_RS24415 PF00004 ATPase family associated with various cellular activities (AAA) AL538_RS24420 PF05638 Type VI secretion system effector, Hcp AL538_RS24425 PF04717 Type VI secretion system, phage-baseplate injector AL538_RS24450 PF00069 Protein kinase domain AL538_RS24465 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath AL538_RS24475 PF05947 Type VI secretion system, TssF AL538_RS24485 PF01037 Lrp/AsnC ligand binding domain AL538_RS24515 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE AL538_RS24545 PF17128 Domain of unknown function (DUF5107) AL538_RS24545 PF13181 Tetratricopeptide repeat AL538_RS24550 PF00083 Sugar (and other) transporter AL538_RS24555 PF00480 ROK family AL538_RS24560 PF01263 Aldose 1-epimerase AL538_RS24565 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AL538_RS24565 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AL538_RS24570 PF04183 IucA / IucC family AL538_RS24570 PF06276 Ferric iron reductase FhuF-like transporter AL538_RS24580 PF04183 IucA / IucC family AL538_RS24580 PF06276 Ferric iron reductase FhuF-like transporter AL538_RS24585 PF00206 Lyase AL538_RS24585 PF02655 ATP-grasp domain AL538_RS24590 PF07715 TonB-dependent Receptor Plug Domain AL538_RS24590 PF00593 TonB dependent receptor AL538_RS24595 PF07715 TonB-dependent Receptor Plug Domain AL538_RS24595 PF07660 Secretin and TonB N terminus short domain AL538_RS24595 PF00593 TonB dependent receptor AL538_RS24600 PF01497 Periplasmic binding protein AL538_RS24605 PF01032 FecCD transport family AL538_RS24610 PF01032 FecCD transport family AL538_RS24615 PF00005 ABC transporter AL538_RS24620 PF00593 TonB dependent receptor AL538_RS24620 PF07715 TonB-dependent Receptor Plug Domain AL538_RS24630 PF00563 EAL domain AL538_RS24630 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS24630 PF03707 Bacterial signalling protein N terminal repeat AL538_RS24635 PF00072 Response regulator receiver domain AL538_RS24635 PF09456 RcsC Alpha-Beta-Loop (ABL) AL538_RS24635 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS24635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS24640 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS24640 PF03707 Bacterial signalling protein N terminal repeat AL538_RS24640 PF13188 PAS domain AL538_RS24640 PF00563 EAL domain AL538_RS24645 PF00072 Response regulator receiver domain AL538_RS24645 PF00196 Bacterial regulatory proteins, luxR family AL538_RS24650 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS24655 PF03466 LysR substrate binding domain AL538_RS24655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS24660 PF00072 Response regulator receiver domain AL538_RS24660 PF00196 Bacterial regulatory proteins, luxR family AL538_RS24665 PF00672 HAMP domain AL538_RS24665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS24670 PF00881 Nitroreductase family AL538_RS24680 PF00072 Response regulator receiver domain AL538_RS24680 PF01584 CheW-like domain AL538_RS24685 PF07963 Prokaryotic N-terminal methylation motif AL538_RS24695 PF00892 EamA-like transporter family AL538_RS24710 PF00034 Cytochrome c AL538_RS24710 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AL538_RS24720 PF00115 Cytochrome C and Quinol oxidase polypeptide I AL538_RS24725 PF00034 Cytochrome c AL538_RS24740 PF00682 HMGL-like AL538_RS24745 PF00378 Enoyl-CoA hydratase/isomerase AL538_RS24750 PF01039 Carboxyl transferase domain AL538_RS24755 PF02770 Acyl-CoA dehydrogenase, middle domain AL538_RS24755 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL538_RS24755 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL538_RS24760 PF09278 MerR, DNA binding AL538_RS24760 PF00376 MerR family regulatory protein AL538_RS24765 PF00108 Thiolase, N-terminal domain AL538_RS24765 PF02803 Thiolase, C-terminal domain AL538_RS24770 PF00171 Aldehyde dehydrogenase family AL538_RS24775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL538_RS24775 PF02770 Acyl-CoA dehydrogenase, middle domain AL538_RS24775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL538_RS24780 PF00378 Enoyl-CoA hydratase/isomerase AL538_RS24785 PF00378 Enoyl-CoA hydratase/isomerase AL538_RS24790 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AL538_RS24790 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AL538_RS24800 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AL538_RS24800 PF06481 COX Aromatic Rich Motif AL538_RS24805 PF00115 Cytochrome C and Quinol oxidase polypeptide I AL538_RS24810 PF00510 Cytochrome c oxidase subunit III AL538_RS24815 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AL538_RS24820 PF01040 UbiA prenyltransferase family AL538_RS24825 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL538_RS24825 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AL538_RS24830 PF01569 PAP2 superfamily AL538_RS24845 PF00893 Small Multidrug Resistance protein AL538_RS24850 PF00892 EamA-like transporter family AL538_RS24870 PF00171 Aldehyde dehydrogenase family AL538_RS24875 PF00005 ABC transporter AL538_RS24875 PF00664 ABC transporter transmembrane region AL538_RS24890 PF01638 HxlR-like helix-turn-helix AL538_RS24900 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AL538_RS24900 PF00929 Exonuclease AL538_RS24900 PF02811 PHP domain AL538_RS24900 PF14579 Helix-hairpin-helix motif AL538_RS24900 PF07733 Bacterial DNA polymerase III alpha NTPase domain AL538_RS24900 PF11490 DNA polymerase III polC-type N-terminus II AL538_RS24965 PF02347 Glycine cleavage system P-protein AL538_RS24970 PF01597 Glycine cleavage H-protein AL538_RS24975 PF00464 Serine hydroxymethyltransferase AL538_RS24985 PF08669 Glycine cleavage T-protein C-terminal barrel domain AL538_RS24985 PF01571 Aminomethyltransferase folate-binding domain AL538_RS24995 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL538_RS25000 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL538_RS25005 PF00873 AcrB/AcrD/AcrF family AL538_RS25030 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AL538_RS25030 PF02378 Phosphotransferase system, EIIC AL538_RS25035 PF00294 pfkB family carbohydrate kinase AL538_RS25040 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AL538_RS25040 PF00381 PTS HPr component phosphorylation site AL538_RS25045 PF00356 Bacterial regulatory proteins, lacI family AL538_RS25045 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AL538_RS25060 PF01590 GAF domain AL538_RS25060 PF00563 EAL domain AL538_RS25060 PF00989 PAS fold AL538_RS25060 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS25065 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS25070 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL538_RS25075 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS25080 PF00005 ABC transporter AL538_RS25090 PF00465 Iron-containing alcohol dehydrogenase AL538_RS25095 PF12833 Helix-turn-helix domain AL538_RS25095 PF06719 AraC-type transcriptional regulator N-terminus AL538_RS25100 PF00704 Glycosyl hydrolases family 18 AL538_RS25100 PF06483 Chitinase C AL538_RS25105 PF00483 Nucleotidyl transferase AL538_RS25110 PF01268 Formate--tetrahydrofolate ligase AL538_RS25115 PF00294 pfkB family carbohydrate kinase AL538_RS25130 PF11849 Domain of unknown function (DUF3369) AL538_RS25135 PF13419 Haloacid dehalogenase-like hydrolase AL538_RS25145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS25145 PF00672 HAMP domain AL538_RS25155 PF04336 Acyl carrier protein phosphodiesterase AL538_RS25160 PF00270 DEAD/DEAH box helicase AL538_RS25160 PF00271 Helicase conserved C-terminal domain AL538_RS25165 PF00563 EAL domain AL538_RS25165 PF12792 CSS motif domain associated with EAL AL538_RS25180 PF01292 Prokaryotic cytochrome b561 AL538_RS25185 PF04264 YceI-like domain AL538_RS25190 PF01226 Formate/nitrite transporter AL538_RS25200 PF03466 LysR substrate binding domain AL538_RS25200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS25205 PF06496 Protein of unknown function (DUF1097) AL538_RS25210 PF11398 Protein of unknown function (DUF2813) AL538_RS25215 PF02872 5'-nucleotidase, C-terminal domain AL538_RS25215 PF00149 Calcineurin-like phosphoesterase AL538_RS25220 PF03741 Integral membrane protein TerC family AL538_RS25235 PF02310 B12 binding domain AL538_RS25235 PF02607 B12 binding domain AL538_RS25235 PF02965 Vitamin B12 dependent methionine synthase, activation domain AL538_RS25235 PF00809 Pterin binding enzyme AL538_RS25235 PF02574 Homocysteine S-methyltransferase AL538_RS25250 PF12262 Bacterial virulence factor lipase N-terminal AL538_RS25255 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AL538_RS25270 PF03061 Thioesterase superfamily AL538_RS25280 PF12793 Sugar transport-related sRNA regulator N-term AL538_RS25280 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL538_RS25305 PF00226 DnaJ domain AL538_RS25305 PF01556 DnaJ C terminal domain AL538_RS25305 PF00684 DnaJ central domain AL538_RS25315 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS25315 PF03707 Bacterial signalling protein N terminal repeat AL538_RS25315 PF00563 EAL domain AL538_RS25315 PF13188 PAS domain AL538_RS25320 PF12241 Trans-2-enoyl-CoA reductase catalytic region AL538_RS25320 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AL538_RS25320 PF07055 Enoyl reductase FAD binding domain AL538_RS25325 PF13472 GDSL-like Lipase/Acylhydrolase family AL538_RS25330 PF00005 ABC transporter AL538_RS25345 PF02626 Carboxyltransferase domain, subdomain A and B AL538_RS25350 PF02682 Carboxyltransferase domain, subdomain C and D AL538_RS25355 PF03746 LamB/YcsF family AL538_RS25360 PF13426 PAS domain AL538_RS25360 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS25360 PF00563 EAL domain AL538_RS25360 PF08447 PAS fold AL538_RS25360 PF05231 MASE1 AL538_RS25360 PF08448 PAS fold AL538_RS25365 PF16363 GDP-mannose 4,6 dehydratase AL538_RS25375 PF04886 PT repeat AL538_RS25375 PF00593 TonB dependent receptor AL538_RS25375 PF07715 TonB-dependent Receptor Plug Domain AL538_RS25380 PF03466 LysR substrate binding domain AL538_RS25380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS25385 PF07715 TonB-dependent Receptor Plug Domain AL538_RS25385 PF00593 TonB dependent receptor AL538_RS25385 PF04886 PT repeat AL538_RS25390 PF13607 Succinyl-CoA ligase like flavodoxin domain AL538_RS25390 PF13380 CoA binding domain AL538_RS25390 PF00583 Acetyltransferase (GNAT) family AL538_RS25395 PF05036 Sporulation related domain AL538_RS25400 PF07478 D-ala D-ala ligase C-terminus AL538_RS25400 PF01820 D-ala D-ala ligase N-terminus AL538_RS25410 PF01253 Translation initiation factor SUI1 AL538_RS25445 PF03701 Uncharacterised protein family (UPF0181) AL538_RS25460 PF00072 Response regulator receiver domain AL538_RS25460 PF00486 Transcriptional regulatory protein, C terminal AL538_RS25470 PF02233 NAD(P) transhydrogenase beta subunit AL538_RS25475 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AL538_RS25475 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AL538_RS25475 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AL538_RS25490 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS25505 PF00360 Phytochrome region AL538_RS25505 PF00563 EAL domain AL538_RS25505 PF01590 GAF domain AL538_RS25505 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS25515 PF03459 TOBE domain AL538_RS25515 PF00005 ABC transporter AL538_RS25520 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS25530 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AL538_RS25530 PF07685 CobB/CobQ-like glutamine amidotransferase domain AL538_RS25535 PF04076 Bacterial OB fold (BOF) protein AL538_RS25545 PF18030 RimK PreATP-grasp domain AL538_RS25545 PF08443 RimK-like ATP-grasp domain AL538_RS25550 PF00155 Aminotransferase class I and II AL538_RS25555 PF12833 Helix-turn-helix domain AL538_RS25560 PF01554 MatE AL538_RS25570 PF03477 ATP cone domain AL538_RS25570 PF13597 Anaerobic ribonucleoside-triphosphate reductase AL538_RS25590 PF04143 Sulphur transport AL538_RS25600 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL538_RS25600 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AL538_RS25630 PF07690 Major Facilitator Superfamily AL538_RS25635 PF00072 Response regulator receiver domain AL538_RS25635 PF00196 Bacterial regulatory proteins, luxR family AL538_RS25640 PF05231 MASE1 AL538_RS25640 PF07730 Histidine kinase AL538_RS25640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS25645 PF07690 Major Facilitator Superfamily AL538_RS25650 PF01238 Phosphomannose isomerase type I AL538_RS25660 PF01594 AI-2E family transporter AL538_RS25670 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL538_RS25670 PF00529 HlyD membrane-fusion protein of T1SS AL538_RS25695 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AL538_RS25695 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AL538_RS25700 PF00085 Thioredoxin AL538_RS25705 PF07690 Major Facilitator Superfamily AL538_RS25710 PF07495 Y_Y_Y domain AL538_RS25710 PF00072 Response regulator receiver domain AL538_RS25710 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS25710 PF12833 Helix-turn-helix domain AL538_RS25710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS25710 PF07494 Two component regulator propeller AL538_RS25720 PF11756 Nitrous oxide-stimulated promoter AL538_RS25735 PF00593 TonB dependent receptor AL538_RS25735 PF07715 TonB-dependent Receptor Plug Domain AL538_RS25745 PF03605 Anaerobic c4-dicarboxylate membrane transporter AL538_RS25760 PF10414 Sirohaem synthase dimerisation region AL538_RS25760 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AL538_RS25760 PF14824 Sirohaem biosynthesis protein central AL538_RS25765 PF01226 Formate/nitrite transporter AL538_RS25770 PF13806 Rieske-like [2Fe-2S] domain AL538_RS25775 PF18267 Rubredoxin NAD+ reductase C-terminal domain AL538_RS25775 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AL538_RS25775 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AL538_RS25775 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL538_RS25775 PF04324 BFD-like [2Fe-2S] binding domain AL538_RS25780 PF00563 EAL domain AL538_RS25780 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS25780 PF13426 PAS domain AL538_RS25835 PF09154 Domain of unknown function (DUF1939) AL538_RS25835 PF00128 Alpha amylase, catalytic domain AL538_RS25855 PF01565 FAD binding domain AL538_RS25855 PF09330 D-lactate dehydrogenase, membrane binding AL538_RS25860 PF03466 LysR substrate binding domain AL538_RS25860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS25870 PF05762 VWA domain containing CoxE-like protein AL538_RS25875 PF17868 AAA lid domain AL538_RS25875 PF12592 Protein of unknown function (DUF3763) AL538_RS25875 PF07728 AAA domain (dynein-related subfamily) AL538_RS25885 PF01212 Beta-eliminating lyase AL538_RS25890 PF00034 Cytochrome c AL538_RS25895 PF03606 C4-dicarboxylate anaerobic carrier AL538_RS25905 PF07690 Major Facilitator Superfamily AL538_RS25915 PF08212 Lipocalin-like domain AL538_RS25950 PF00704 Glycosyl hydrolases family 18 AL538_RS25960 PF13476 AAA domain AL538_RS25965 PF12320 Type 5 capsule protein repressor C-terminal domain AL538_RS25965 PF00149 Calcineurin-like phosphoesterase AL538_RS25990 PF03527 RHS protein AL538_RS26005 PF04717 Type VI secretion system, phage-baseplate injector AL538_RS26015 PF10431 C-terminal, D2-small domain, of ClpB protein AL538_RS26015 PF17871 AAA lid domain AL538_RS26015 PF07724 AAA domain (Cdc48 subfamily) AL538_RS26015 PF00004 ATPase family associated with various cellular activities (AAA) AL538_RS26025 PF05947 Type VI secretion system, TssF AL538_RS26040 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath AL538_RS26045 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath AL538_RS26050 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 AL538_RS26070 PF14331 ImcF-related N-terminal domain AL538_RS26070 PF06744 Type VI secretion protein IcmF C-terminal AL538_RS26070 PF06761 Intracellular multiplication and human macrophage-killing AL538_RS26075 PF00691 OmpA family AL538_RS26075 PF13677 Membrane MotB of proton-channel complex MotA/MotB AL538_RS26080 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE AL538_RS26095 PF03793 PASTA domain AL538_RS26095 PF00069 Protein kinase domain AL538_RS26120 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL538_RS26125 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AL538_RS26135 PF01757 Acyltransferase family AL538_RS26145 PF09722 Protein of unknown function (DUF2384) AL538_RS26150 PF01645 Conserved region in glutamate synthase AL538_RS26150 PF13187 4Fe-4S dicluster domain AL538_RS26160 PF00753 Metallo-beta-lactamase superfamily AL538_RS26165 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AL538_RS26220 PF12833 Helix-turn-helix domain AL538_RS26220 PF00072 Response regulator receiver domain AL538_RS26240 PF00072 Response regulator receiver domain AL538_RS26240 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS26245 PF00378 Enoyl-CoA hydratase/isomerase AL538_RS26250 PF01594 AI-2E family transporter AL538_RS26255 PF12464 Maltose acetyltransferase AL538_RS26255 PF14602 Hexapeptide repeat of succinyl-transferase AL538_RS26265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS26265 PF02743 Cache domain AL538_RS26265 PF00672 HAMP domain AL538_RS26275 PF01292 Prokaryotic cytochrome b561 AL538_RS26285 PF01551 Peptidase family M23 AL538_RS26285 PF08525 Opacity-associated protein A N-terminal motif AL538_RS26285 PF01476 LysM domain AL538_RS26290 PF03466 LysR substrate binding domain AL538_RS26290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS26305 PF00072 Response regulator receiver domain AL538_RS26305 PF00211 Adenylate and Guanylate cyclase catalytic domain AL538_RS26335 PF04324 BFD-like [2Fe-2S] binding domain AL538_RS26335 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AL538_RS26335 PF18267 Rubredoxin NAD+ reductase C-terminal domain AL538_RS26335 PF13806 Rieske-like [2Fe-2S] domain AL538_RS26335 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AL538_RS26335 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL538_RS26340 PF00005 ABC transporter AL538_RS26345 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS26350 PF00005 ABC transporter AL538_RS26360 PF00072 Response regulator receiver domain AL538_RS26360 PF03861 ANTAR domain AL538_RS26365 PF01738 Dienelactone hydrolase family AL538_RS26370 PF00591 Glycosyl transferase family, a/b domain AL538_RS26370 PF02885 Glycosyl transferase family, helical bundle domain AL538_RS26375 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AL538_RS26375 PF14824 Sirohaem biosynthesis protein central AL538_RS26375 PF10414 Sirohaem synthase dimerisation region AL538_RS26380 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AL538_RS26380 PF01568 Molydopterin dinucleotide binding domain AL538_RS26380 PF00384 Molybdopterin oxidoreductase AL538_RS26385 PF00583 Acetyltransferase (GNAT) family AL538_RS26390 PF00563 EAL domain AL538_RS26390 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS26390 PF08448 PAS fold AL538_RS26395 PF03222 Tryptophan/tyrosine permease family AL538_RS26405 PF08448 PAS fold AL538_RS26405 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS26415 PF01483 Proprotein convertase P-domain AL538_RS26415 PF00082 Subtilase family AL538_RS26425 PF00245 Alkaline phosphatase AL538_RS26440 PF00072 Response regulator receiver domain AL538_RS26440 PF00486 Transcriptional regulatory protein, C terminal AL538_RS26470 PF04314 Copper chaperone PCu(A)C AL538_RS26475 PF00012 Hsp70 protein AL538_RS26490 PF00676 Dehydrogenase E1 component AL538_RS26495 PF02780 Transketolase, C-terminal domain AL538_RS26495 PF02779 Transketolase, pyrimidine binding domain AL538_RS26500 PF02817 e3 binding domain AL538_RS26500 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AL538_RS26500 PF00364 Biotin-requiring enzyme AL538_RS26505 PF01012 Electron transfer flavoprotein domain AL538_RS26505 PF00766 Electron transfer flavoprotein FAD-binding domain AL538_RS26510 PF01012 Electron transfer flavoprotein domain AL538_RS26520 PF02424 ApbE family AL538_RS26525 PF00890 FAD binding domain AL538_RS26525 PF04205 FMN-binding domain AL538_RS26525 PF03358 NADPH-dependent FMN reductase AL538_RS26530 PF16736 Single Cache-like AL538_RS26530 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS26530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS26530 PF00989 PAS fold AL538_RS26535 PF00072 Response regulator receiver domain AL538_RS26535 PF00486 Transcriptional regulatory protein, C terminal AL538_RS26550 PF13417 Glutathione S-transferase, N-terminal domain AL538_RS26550 PF00043 Glutathione S-transferase, C-terminal domain AL538_RS26555 PF03466 LysR substrate binding domain AL538_RS26555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS26565 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS26570 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS26575 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL538_RS26580 PF00005 ABC transporter AL538_RS26585 PF00672 HAMP domain AL538_RS26585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS26585 PF02743 Cache domain AL538_RS26615 PF02028 BCCT, betaine/carnitine/choline family transporter AL538_RS26625 PF00171 Aldehyde dehydrogenase family AL538_RS26635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS26635 PF03466 LysR substrate binding domain AL538_RS26640 PF00871 Acetokinase family AL538_RS26645 PF00271 Helicase conserved C-terminal domain AL538_RS26645 PF03880 DbpA RNA binding domain AL538_RS26645 PF00270 DEAD/DEAH box helicase AL538_RS26650 PF00575 S1 RNA binding domain AL538_RS26650 PF08206 Ribonuclease B OB domain AL538_RS26650 PF00773 RNB domain AL538_RS26655 PF12833 Helix-turn-helix domain AL538_RS26665 PF12849 PBP superfamily domain AL538_RS26670 PF01575 MaoC like domain AL538_RS26705 PF07693 KAP family P-loop domain AL538_RS26720 PF00239 Resolvase, N terminal domain AL538_RS26720 PF02796 Helix-turn-helix domain of resolvase AL538_RS26735 PF16527 Two-component sensor protein CpxA, periplasmic domain AL538_RS26735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS26735 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS26735 PF00672 HAMP domain AL538_RS26740 PF00486 Transcriptional regulatory protein, C terminal AL538_RS26740 PF00072 Response regulator receiver domain AL538_RS26745 PF08534 Redoxin AL538_RS26750 PF08534 Redoxin AL538_RS26755 PF00892 EamA-like transporter family AL538_RS26760 PF00005 ABC transporter AL538_RS26765 PF00196 Bacterial regulatory proteins, luxR family AL538_RS26765 PF00563 EAL domain AL538_RS26785 PF00270 DEAD/DEAH box helicase AL538_RS26785 PF00271 Helicase conserved C-terminal domain AL538_RS26790 PF08448 PAS fold AL538_RS26790 PF08447 PAS fold AL538_RS26790 PF05231 MASE1 AL538_RS26790 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS26790 PF13426 PAS domain AL538_RS26790 PF00563 EAL domain AL538_RS26795 PF02492 CobW/HypB/UreG, nucleotide-binding domain AL538_RS26795 PF07683 Cobalamin synthesis protein cobW C-terminal domain AL538_RS26805 PF01470 Pyroglutamyl peptidase AL538_RS26820 PF00593 TonB dependent receptor AL538_RS26820 PF07715 TonB-dependent Receptor Plug Domain AL538_RS26830 PF13411 MerR HTH family regulatory protein AL538_RS26835 PF00005 ABC transporter AL538_RS26840 PF01032 FecCD transport family AL538_RS26845 PF01032 FecCD transport family AL538_RS26850 PF01497 Periplasmic binding protein AL538_RS26865 PF01048 Phosphorylase superfamily AL538_RS26870 PF04973 Nicotinamide mononucleotide transporter AL538_RS26880 PF00356 Bacterial regulatory proteins, lacI family AL538_RS26885 PF00294 pfkB family carbohydrate kinase AL538_RS26890 PF13407 Periplasmic binding protein domain AL538_RS26895 PF02653 Branched-chain amino acid transport system / permease component AL538_RS26900 PF00005 ABC transporter AL538_RS26905 PF05025 RbsD / FucU transport protein family AL538_RS26910 PF00563 EAL domain AL538_RS26910 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS26915 PF01048 Phosphorylase superfamily AL538_RS26920 PF01177 Asp/Glu/Hydantoin racemase AL538_RS26935 PF13006 Insertion element 4 transposase N-terminal AL538_RS26935 PF01609 Transposase DDE domain AL538_RS26950 PF09335 SNARE associated Golgi protein AL538_RS26980 PF04116 Fatty acid hydroxylase superfamily AL538_RS26995 PF09308 LuxQ, periplasmic AL538_RS26995 PF00072 Response regulator receiver domain AL538_RS26995 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS26995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS27000 PF00034 Cytochrome c AL538_RS27000 PF03150 Di-haem cytochrome c peroxidase AL538_RS27005 PF09308 LuxQ, periplasmic AL538_RS27005 PF00512 His Kinase A (phospho-acceptor) domain AL538_RS27005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL538_RS27005 PF00072 Response regulator receiver domain AL538_RS27010 PF03707 Bacterial signalling protein N terminal repeat AL538_RS27010 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS27010 PF00563 EAL domain AL538_RS27025 PF16200 C-terminal region of band_7 AL538_RS27025 PF01145 SPFH domain / Band 7 family AL538_RS27035 PF00881 Nitroreductase family AL538_RS27040 PF00571 CBS domain AL538_RS27040 PF00005 ABC transporter AL538_RS27045 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS27050 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AL538_RS27055 PF00732 GMC oxidoreductase AL538_RS27055 PF05199 GMC oxidoreductase AL538_RS27060 PF00171 Aldehyde dehydrogenase family AL538_RS27065 PF00440 Bacterial regulatory proteins, tetR family AL538_RS27065 PF13977 BetI-type transcriptional repressor, C-terminal AL538_RS27075 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS27085 PF01979 Amidohydrolase family AL538_RS27100 PF01553 Acyltransferase AL538_RS27130 PF13488 Glycine zipper AL538_RS27130 PF00691 OmpA family AL538_RS27165 PF00437 Type II/IV secretion system protein AL538_RS27170 PF10609 NUBPL iron-transfer P-loop NTPase AL538_RS27180 PF04972 BON domain AL538_RS27180 PF00263 Bacterial type II and III secretion system protein AL538_RS27180 PF13629 Pilus formation protein N terminal region AL538_RS27200 PF03466 LysR substrate binding domain AL538_RS27200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS27205 PF12146 Serine aminopeptidase, S33 AL538_RS27215 PF00478 IMP dehydrogenase / GMP reductase domain AL538_RS27220 PF01256 Carbohydrate kinase AL538_RS27220 PF03853 YjeF-related protein N-terminus AL538_RS27230 PF00072 Response regulator receiver domain AL538_RS27235 PF00248 Aldo/keto reductase family AL538_RS27250 PF00654 Voltage gated chloride channel AL538_RS27260 PF01566 Natural resistance-associated macrophage protein AL538_RS27270 PF01227 GTP cyclohydrolase I AL538_RS27275 PF03453 MoeA N-terminal region (domain I and II) AL538_RS27275 PF03454 MoeA C-terminal region (domain IV) AL538_RS27275 PF00994 Probable molybdopterin binding domain AL538_RS27280 PF00899 ThiF family AL538_RS27300 PF00581 Rhodanese-like domain AL538_RS27305 PF00563 EAL domain AL538_RS27305 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS27305 PF03707 Bacterial signalling protein N terminal repeat AL538_RS27310 PF00704 Glycosyl hydrolases family 18 AL538_RS27310 PF08329 Chitinase A, N-terminal domain AL538_RS27325 PF00923 Transaldolase/Fructose-6-phosphate aldolase AL538_RS27330 PF02780 Transketolase, C-terminal domain AL538_RS27330 PF00456 Transketolase, thiamine diphosphate binding domain AL538_RS27330 PF02779 Transketolase, pyrimidine binding domain AL538_RS27335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS27335 PF00672 HAMP domain AL538_RS27335 PF12729 Four helix bundle sensory module for signal transduction AL538_RS27340 PF07690 Major Facilitator Superfamily AL538_RS27345 PF00793 DAHP synthetase I family AL538_RS27350 PF00691 OmpA family AL538_RS27350 PF01389 OmpA-like transmembrane domain AL538_RS27355 PF01040 UbiA prenyltransferase family AL538_RS27360 PF02628 Cytochrome oxidase assembly protein AL538_RS27380 PF00510 Cytochrome c oxidase subunit III AL538_RS27385 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 AL538_RS27390 PF00115 Cytochrome C and Quinol oxidase polypeptide I AL538_RS27395 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AL538_RS27395 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AL538_RS27400 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AL538_RS27400 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AL538_RS27400 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AL538_RS27400 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AL538_RS27410 PF01810 LysE type translocator AL538_RS27430 PF01557 Fumarylacetoacetate (FAA) hydrolase family AL538_RS27445 PF00892 EamA-like transporter family AL538_RS27450 PF00462 Glutaredoxin AL538_RS27465 PF07690 Major Facilitator Superfamily AL538_RS27470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS27470 PF03466 LysR substrate binding domain AL538_RS27475 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS27475 PF08448 PAS fold AL538_RS27475 PF08447 PAS fold AL538_RS27475 PF00563 EAL domain AL538_RS27480 PF01476 LysM domain AL538_RS27480 PF08525 Opacity-associated protein A N-terminal motif AL538_RS27480 PF01551 Peptidase family M23 AL538_RS27505 PF07670 Nucleoside recognition AL538_RS27510 PF00672 HAMP domain AL538_RS27510 PF02743 Cache domain AL538_RS27510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS27520 PF03222 Tryptophan/tyrosine permease family AL538_RS27555 PF00107 Zinc-binding dehydrogenase AL538_RS27555 PF08240 Alcohol dehydrogenase GroES-like domain AL538_RS27560 PF02378 Phosphotransferase system, EIIC AL538_RS27560 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AL538_RS27565 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AL538_RS27570 PF07702 UTRA domain AL538_RS27570 PF00392 Bacterial regulatory proteins, gntR family AL538_RS27575 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AL538_RS27575 PF02378 Phosphotransferase system, EIIC AL538_RS27575 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AL538_RS27580 PF07748 Glycosyl hydrolases family 38 C-terminal domain AL538_RS27580 PF01074 Glycosyl hydrolases family 38 N-terminal domain AL538_RS27580 PF09261 Alpha mannosidase middle domain AL538_RS27585 PF01238 Phosphomannose isomerase type I AL538_RS27590 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL538_RS27600 PF01638 HxlR-like helix-turn-helix AL538_RS27615 PF01758 Sodium Bile acid symporter family AL538_RS27630 PF01161 Phosphatidylethanolamine-binding protein AL538_RS27635 PF02567 Phenazine biosynthesis-like protein AL538_RS27640 PF02525 Flavodoxin-like fold AL538_RS27645 PF00999 Sodium/hydrogen exchanger family AL538_RS27645 PF02254 TrkA-N domain AL538_RS27655 PF03466 LysR substrate binding domain AL538_RS27655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS27685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS27685 PF03466 LysR substrate binding domain AL538_RS27700 PF14765 Polyketide synthase dehydratase AL538_RS27700 PF16197 Ketoacyl-synthetase C-terminal extension AL538_RS27700 PF00698 Acyl transferase domain AL538_RS27700 PF00109 Beta-ketoacyl synthase, N-terminal domain AL538_RS27700 PF02801 Beta-ketoacyl synthase, C-terminal domain AL538_RS27700 PF00107 Zinc-binding dehydrogenase AL538_RS27700 PF08240 Alcohol dehydrogenase GroES-like domain AL538_RS27700 PF00550 Phosphopantetheine attachment site AL538_RS27700 PF08659 KR domain AL538_RS27705 PF00128 Alpha amylase, catalytic domain AL538_RS27725 PF00072 Response regulator receiver domain AL538_RS27725 PF01584 CheW-like domain AL538_RS27735 PF01243 Pyridoxamine 5'-phosphate oxidase AL538_RS27740 PF06228 Haem utilisation ChuX/HutX AL538_RS27745 PF04055 Radical SAM superfamily AL538_RS27750 PF03544 Gram-negative bacterial TonB protein C-terminal AL538_RS27755 PF01618 MotA/TolQ/ExbB proton channel family AL538_RS27760 PF02472 Biopolymer transport protein ExbD/TolR AL538_RS27770 PF01032 FecCD transport family AL538_RS27775 PF00005 ABC transporter AL538_RS27780 PF17200 Single Cache domain 2 AL538_RS27780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL538_RS27780 PF00672 HAMP domain AL538_RS27790 PF00005 ABC transporter AL538_RS27800 PF01042 Endoribonuclease L-PSP AL538_RS27810 PF00728 Glycosyl hydrolase family 20, catalytic domain AL538_RS27810 PF02838 Glycosyl hydrolase family 20, domain 2 AL538_RS27815 PF01081 KDPG and KHG aldolase AL538_RS27820 PF00294 pfkB family carbohydrate kinase AL538_RS27825 PF00474 Sodium:solute symporter family AL538_RS27835 PF07969 Amidohydrolase family AL538_RS27845 PF02685 Glucokinase AL538_RS27845 PF01418 Helix-turn-helix domain, rpiR family AL538_RS27845 PF01380 SIS domain AL538_RS27860 PF12838 4Fe-4S dicluster domain AL538_RS27860 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AL538_RS27860 PF00384 Molybdopterin oxidoreductase AL538_RS27860 PF01568 Molydopterin dinucleotide binding domain AL538_RS27860 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AL538_RS27880 PF00873 AcrB/AcrD/AcrF family AL538_RS27905 PF00550 Phosphopantetheine attachment site AL538_RS27905 PF08659 KR domain AL538_RS27905 PF00109 Beta-ketoacyl synthase, N-terminal domain AL538_RS27905 PF08240 Alcohol dehydrogenase GroES-like domain AL538_RS27905 PF16197 Ketoacyl-synthetase C-terminal extension AL538_RS27905 PF14765 Polyketide synthase dehydratase AL538_RS27905 PF00698 Acyl transferase domain AL538_RS27905 PF02801 Beta-ketoacyl synthase, C-terminal domain AL538_RS27910 PF03543 Yersinia/Haemophilus virulence surface antigen AL538_RS27920 PF13673 Acetyltransferase (GNAT) domain AL538_RS27920 PF00583 Acetyltransferase (GNAT) family AL538_RS27940 PF05193 Peptidase M16 inactive domain AL538_RS27940 PF00675 Insulinase (Peptidase family M16) AL538_RS27945 PF06472 ABC transporter transmembrane region 2 AL538_RS27945 PF00005 ABC transporter AL538_RS27950 PF07715 TonB-dependent Receptor Plug Domain AL538_RS27960 PF01618 MotA/TolQ/ExbB proton channel family AL538_RS27965 PF01618 MotA/TolQ/ExbB proton channel family AL538_RS27970 PF02472 Biopolymer transport protein ExbD/TolR AL538_RS27985 PF00293 NUDIX domain AL538_RS27995 PF00034 Cytochrome c AL538_RS27995 PF03150 Di-haem cytochrome c peroxidase AL538_RS27995 PF14376 Haem-binding domain AL538_RS28005 PF13302 Acetyltransferase (GNAT) domain AL538_RS28015 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AL538_RS28015 PF00326 Prolyl oligopeptidase family AL538_RS28020 PF00005 ABC transporter AL538_RS28020 PF12848 ABC transporter AL538_RS28020 PF16326 ABC transporter C-terminal domain AL538_RS28025 PF01980 tRNA-methyltransferase O AL538_RS28045 PF07690 Major Facilitator Superfamily AL538_RS28060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS28060 PF03466 LysR substrate binding domain AL538_RS28065 PF00582 Universal stress protein family AL538_RS28075 PF08220 DeoR-like helix-turn-helix domain AL538_RS28075 PF00455 DeoR C terminal sensor domain AL538_RS28080 PF03009 Glycerophosphoryl diester phosphodiesterase family AL538_RS28085 PF13416 Bacterial extracellular solute-binding protein AL538_RS28090 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS28095 PF00528 Binding-protein-dependent transport system inner membrane component AL538_RS28100 PF00005 ABC transporter AL538_RS28100 PF17912 MalK OB fold domain AL538_RS28115 PF01047 MarR family AL538_RS28130 PF02492 CobW/HypB/UreG, nucleotide-binding domain AL538_RS28130 PF07683 Cobalamin synthesis protein cobW C-terminal domain AL538_RS28135 PF00132 Bacterial transferase hexapeptide (six repeats) AL538_RS28140 PF01979 Amidohydrolase family AL538_RS28150 PF01734 Patatin-like phospholipase AL538_RS28155 PF02678 Pirin AL538_RS28155 PF05726 Pirin C-terminal cupin domain AL538_RS28160 PF00313 'Cold-shock' DNA-binding domain AL538_RS28175 PF00962 Adenosine/AMP deaminase AL538_RS28180 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS28180 PF17151 Periplasmic sensor domain AL538_RS28185 PF03466 LysR substrate binding domain AL538_RS28185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS28200 PF00462 Glutaredoxin AL538_RS28200 PF08534 Redoxin AL538_RS28205 PF08241 Methyltransferase domain AL538_RS28215 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS28215 PF08448 PAS fold AL538_RS28220 PF00768 D-alanyl-D-alanine carboxypeptidase AL538_RS28220 PF07943 Penicillin-binding protein 5, C-terminal domain AL538_RS28230 PF02028 BCCT, betaine/carnitine/choline family transporter AL538_RS28235 PF02525 Flavodoxin-like fold AL538_RS28240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL538_RS28240 PF03466 LysR substrate binding domain AL538_RS28245 PF02798 Glutathione S-transferase, N-terminal domain AL538_RS28250 PF00440 Bacterial regulatory proteins, tetR family AL538_RS28250 PF02909 Tetracyclin repressor-like, C-terminal domain AL538_RS28255 PF01872 RibD C-terminal domain AL538_RS28315 PF13693 Winged helix-turn-helix DNA-binding AL538_RS28320 PF02316 Mu DNA-binding domain AL538_RS28320 PF02914 Bacteriophage Mu transposase AL538_RS28320 PF09039 Mu DNA binding, I gamma subdomain AL538_RS28320 PF09299 Mu transposase, C-terminal AL538_RS28325 PF09077 Mu B transposition protein, C terminal AL538_RS28325 PF13401 AAA domain AL538_RS28400 PF08765 Mor transcription activator family AL538_RS28430 PF08461 Ribonuclease R winged-helix domain AL538_RS28435 PF11985 Protein of unknown function (DUF3486) AL538_RS28440 PF03237 Terminase-like family AL538_RS28445 PF06074 Protein of unknown function (DUF935) AL538_RS28465 PF10123 Mu-like prophage I protein AL538_RS28475 PF10124 Mu-like prophage major head subunit gpT AL538_RS28480 PF12949 HeH/LEM domain AL538_RS28480 PF17891 Mu-like prophage FluMu N-terminal domain AL538_RS28485 PF07030 Protein of unknown function (DUF1320) AL538_RS28555 PF00106 short chain dehydrogenase AL538_RS28565 PF00375 Sodium:dicarboxylate symporter family AL538_RS28570 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL538_RS28580 PF00127 Copper binding proteins, plastocyanin/azurin family AL538_RS28585 PF02378 Phosphotransferase system, EIIC AL538_RS28590 PF00563 EAL domain AL538_RS28590 PF03707 Bacterial signalling protein N terminal repeat AL538_RS28590 PF00990 Diguanylate cyclase, GGDEF domain AL538_RS28600 PF00691 OmpA family