locus-tag class description EPB53_RS00005 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding EPB53_RS00005 PF12170 DNA polymerase III tau subunit V interacting with alpha EPB53_RS00005 PF12169 DNA polymerase III subunits gamma and tau domain III EPB53_RS00010 PF02575 YbaB/EbfC DNA-binding family EPB53_RS00015 PF13662 Toprim domain EPB53_RS00015 PF02132 RecR protein EPB53_RS00020 PF00990 Diguanylate cyclase, GGDEF domain EPB53_RS00020 PF08448 PAS fold EPB53_RS00025 PF03692 Putative zinc- or iron-chelating domain EPB53_RS00030 PF03692 Putative zinc- or iron-chelating domain EPB53_RS00045 PF01609 Transposase DDE domain EPB53_RS00045 PF13808 DDE_Tnp_1-associated EPB53_RS00150 PF04227 Indigoidine synthase A like protein EPB53_RS00155 PF00975 Thioesterase domain EPB53_RS00155 PF00550 Phosphopantetheine attachment site EPB53_RS00155 PF00668 Condensation domain EPB53_RS00155 PF13193 AMP-binding enzyme C-terminal domain EPB53_RS00155 PF00501 AMP-binding enzyme EPB53_RS00160 PF01047 MarR family EPB53_RS00170 PF00892 EamA-like transporter family EPB53_RS00180 PF01361 Tautomerase enzyme EPB53_RS00185 PF13419 Haloacid dehalogenase-like hydrolase EPB53_RS00190 PF03448 MgtE intracellular N domain EPB53_RS00190 PF01769 Divalent cation transporter EPB53_RS00190 PF00571 CBS domain EPB53_RS00195 PF00884 Sulfatase EPB53_RS00195 PF08019 Phosphoethanolamine transferase EptA/EptB EPB53_RS00200 PF01219 Prokaryotic diacylglycerol kinase EPB53_RS00210 PF11893 Domain of unknown function (DUF3413) EPB53_RS00210 PF00884 Sulfatase EPB53_RS00215 PF07208 Protein of unknown function (DUF1414) EPB53_RS00220 PF04245 37-kD nucleoid-associated bacterial protein EPB53_RS00225 PF03553 Na+/H+ antiporter family EPB53_RS00235 PF01914 MarC family integral membrane protein EPB53_RS00240 PF00465 Iron-containing alcohol dehydrogenase EPB53_RS00240 PF00171 Aldehyde dehydrogenase family EPB53_RS00245 PF07992 Pyridine nucleotide-disulphide oxidoreductase EPB53_RS00250 PF00175 Oxidoreductase NAD-binding domain EPB53_RS00250 PF00970 Oxidoreductase FAD-binding domain EPB53_RS00250 PF00111 2Fe-2S iron-sulfur cluster binding domain EPB53_RS00255 PF03063 Prismane/CO dehydrogenase family EPB53_RS00260 PF01590 GAF domain EPB53_RS00260 PF00158 Sigma-54 interaction domain EPB53_RS00275 PF17757 UvrB interaction domain EPB53_RS00275 PF02559 CarD-like/TRCF domain EPB53_RS00275 PF00270 DEAD/DEAH box helicase EPB53_RS00275 PF00271 Helicase conserved C-terminal domain EPB53_RS00275 PF03461 TRCF domain EPB53_RS00285 PF02687 FtsX-like permease family EPB53_RS00285 PF12704 MacB-like periplasmic core domain EPB53_RS00290 PF00005 ABC transporter EPB53_RS00365 PF07030 Protein of unknown function (DUF1320) EPB53_RS00380 PF12949 HeH/LEM domain EPB53_RS00380 PF17891 Mu-like prophage FluMu N-terminal domain EPB53_RS00385 PF10124 Mu-like prophage major head subunit gpT EPB53_RS00395 PF10123 Mu-like prophage I protein EPB53_RS00400 PF05069 Phage virion morphogenesis family EPB53_RS00410 PF06074 Protein of unknown function (DUF935) EPB53_RS00415 PF03237 Terminase-like family EPB53_RS00420 PF11985 Protein of unknown function (DUF3486) EPB53_RS00425 PF08461 Ribonuclease R winged-helix domain EPB53_RS00545 PF13401 AAA domain EPB53_RS00545 PF09077 Mu B transposition protein, C terminal EPB53_RS00550 PF02914 Bacteriophage Mu transposase EPB53_RS00550 PF02316 Mu DNA-binding domain EPB53_RS00550 PF09039 Mu DNA binding, I gamma subdomain EPB53_RS00550 PF09299 Mu transposase, C-terminal EPB53_RS00555 PF13693 Winged helix-turn-helix DNA-binding EPB53_RS00570 PF00753 Metallo-beta-lactamase superfamily EPB53_RS00570 PF03772 Competence protein EPB53_RS00570 PF13567 Domain of unknown function (DUF4131) EPB53_RS00575 PF00664 ABC transporter transmembrane region EPB53_RS00575 PF00005 ABC transporter EPB53_RS00580 PF02606 Tetraacyldisaccharide-1-P 4'-kinase EPB53_RS00585 PF03966 Trm112p-like protein EPB53_RS00590 PF02348 Cytidylyltransferase EPB53_RS00595 PF04293 SpoVR like protein EPB53_RS00600 PF04285 Protein of unknown function (DUF444) EPB53_RS00605 PF08298 PrkA AAA domain EPB53_RS00605 PF06798 PrkA serine protein kinase C-terminal domain EPB53_RS00615 PF03887 YfbU domain EPB53_RS00620 PF04055 Radical SAM superfamily EPB53_RS00630 PF02901 Pyruvate formate lyase-like EPB53_RS00630 PF01228 Glycine radical EPB53_RS00640 PF00005 ABC transporter EPB53_RS00645 PF00497 Bacterial extracellular solute-binding proteins, family 3 EPB53_RS00650 PF00528 Binding-protein-dependent transport system inner membrane component EPB53_RS00655 PF00528 Binding-protein-dependent transport system inner membrane component EPB53_RS00660 PF03372 Endonuclease/Exonuclease/phosphatase family EPB53_RS00665 PF10689 Protein of unknown function (DUF2496) EPB53_RS00685 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) EPB53_RS00690 PF02810 SEC-C motif EPB53_RS00695 PF08668 HDOD domain EPB53_RS00695 PF00563 EAL domain EPB53_RS00700 PF00149 Calcineurin-like phosphoesterase EPB53_RS00705 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EPB53_RS00710 PF01406 tRNA synthetases class I (C) catalytic domain EPB53_RS00710 PF09190 DALR domain EPB53_RS00720 PF01330 RuvA N terminal domain EPB53_RS00720 PF07499 RuvA, C-terminal domain EPB53_RS00725 PF17864 RuvB AAA lid domain EPB53_RS00725 PF05491 RuvB C-terminal winged helix domain EPB53_RS00725 PF05496 Holliday junction DNA helicase RuvB P-loop domain EPB53_RS00730 PF01654 Cytochrome bd terminal oxidase subunit I EPB53_RS00735 PF02322 Cytochrome bd terminal oxidase subunit II EPB53_RS00740 PF08173 Membrane bound YbgT-like protein EPB53_RS00750 PF03061 Thioesterase superfamily EPB53_RS00755 PF01618 MotA/TolQ/ExbB proton channel family EPB53_RS00760 PF02472 Biopolymer transport protein ExbD/TolR EPB53_RS00770 PF07676 WD40-like Beta Propeller Repeat EPB53_RS00770 PF04052 TolB amino-terminal domain EPB53_RS00775 PF00691 OmpA family EPB53_RS00780 PF16331 TolA binding protein trimerisation EPB53_RS00780 PF13174 Tetratricopeptide repeat EPB53_RS00785 PF02445 Quinolinate synthetase A protein EPB53_RS00860 PF00872 Transposase, Mutator family EPB53_RS00865 PF13808 DDE_Tnp_1-associated EPB53_RS00865 PF01609 Transposase DDE domain EPB53_RS00870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB53_RS00870 PF12729 Four helix bundle sensory module for signal transduction EPB53_RS00870 PF00672 HAMP domain EPB53_RS00880 PF03222 Tryptophan/tyrosine permease family EPB53_RS00885 PF01212 Beta-eliminating lyase EPB53_RS00905 PF00440 Bacterial regulatory proteins, tetR family EPB53_RS00905 PF08360 QacR-like protein, C-terminal region EPB53_RS00930 PF01212 Beta-eliminating lyase EPB53_RS00935 PF04235 Protein of unknown function (DUF418) EPB53_RS00940 PF02743 Cache domain EPB53_RS00940 PF00672 HAMP domain EPB53_RS00940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB53_RS00945 PF03889 Alternative ribosome-rescue factor A EPB53_RS00965 PF04011 LemA family EPB53_RS00970 PF01458 Uncharacterized protein family (UPF0051) EPB53_RS00975 PF00005 ABC transporter EPB53_RS00980 PF01458 Uncharacterized protein family (UPF0051) EPB53_RS00985 PF00266 Aminotransferase class-V EPB53_RS00990 PF01521 Iron-sulphur cluster biosynthesis EPB53_RS00995 PF01883 Iron-sulfur cluster assembly protein EPB53_RS01000 PF02657 Fe-S metabolism associated domain EPB53_RS01010 PF00392 Bacterial regulatory proteins, gntR family EPB53_RS01010 PF07702 UTRA domain EPB53_RS01015 PF00005 ABC transporter EPB53_RS01025 PF02028 BCCT, betaine/carnitine/choline family transporter EPB53_RS01035 PF01740 STAS domain EPB53_RS01035 PF00916 Sulfate permease family EPB53_RS01040 PF01022 Bacterial regulatory protein, arsR family EPB53_RS01045 PF01758 Sodium Bile acid symporter family EPB53_RS01060 PF06953 Arsenical resistance operon trans-acting repressor ArsD EPB53_RS01065 PF02374 Anion-transporting ATPase EPB53_RS01070 PF01758 Sodium Bile acid symporter family EPB53_RS01075 PF01895 PhoU domain EPB53_RS01080 PF00005 ABC transporter EPB53_RS01085 PF00528 Binding-protein-dependent transport system inner membrane component EPB53_RS01090 PF00528 Binding-protein-dependent transport system inner membrane component EPB53_RS01100 PF01022 Bacterial regulatory protein, arsR family EPB53_RS01105 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EPB53_RS01105 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EPB53_RS01125 PF16295 Tetracyclin repressor-like, C-terminal domain EPB53_RS01125 PF00440 Bacterial regulatory proteins, tetR family EPB53_RS01130 PF02770 Acyl-CoA dehydrogenase, middle domain EPB53_RS01130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EPB53_RS01130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EPB53_RS01130 PF09317 Domain of unknown function (DUF1974) EPB53_RS01135 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase EPB53_RS01135 PF12241 Trans-2-enoyl-CoA reductase catalytic region EPB53_RS01135 PF07055 Enoyl reductase FAD binding domain EPB53_RS01140 PF02080 TrkA-C domain EPB53_RS01140 PF06826 Predicted Permease Membrane Region EPB53_RS01145 PF00462 Glutaredoxin EPB53_RS01150 PF00171 Aldehyde dehydrogenase family EPB53_RS01150 PF00465 Iron-containing alcohol dehydrogenase EPB53_RS01155 PF01380 SIS domain EPB53_RS01155 PF01418 Helix-turn-helix domain, rpiR family EPB53_RS01160 PF00282 Pyridoxal-dependent decarboxylase conserved domain EPB53_RS01165 PF03956 Lysine exporter LysO EPB53_RS01175 PF04994 TfoX C-terminal domain EPB53_RS01175 PF04993 TfoX N-terminal domain EPB53_RS01190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB53_RS01190 PF00512 His Kinase A (phospho-acceptor) domain EPB53_RS01190 PF00497 Bacterial extracellular solute-binding proteins, family 3 EPB53_RS01190 PF00497 Bacterial extracellular solute-binding proteins, family 3 EPB53_RS01190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB53_RS01190 PF00512 His Kinase A (phospho-acceptor) domain EPB53_RS01200 PF00266 Aminotransferase class-V EPB53_RS01205 PF00672 HAMP domain EPB53_RS01205 PF02743 Cache domain EPB53_RS01205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB53_RS01210 PF08497 Radical SAM N-terminal EPB53_RS01210 PF11842 Domain of unknown function (DUF3362) EPB53_RS01210 PF04055 Radical SAM superfamily EPB53_RS01215 PF03707 Bacterial signalling protein N terminal repeat EPB53_RS01215 PF00990 Diguanylate cyclase, GGDEF domain EPB53_RS01215 PF00563 EAL domain EPB53_RS01220 PF00675 Insulinase (Peptidase family M16) EPB53_RS01220 PF05193 Peptidase M16 inactive domain EPB53_RS01235 PF03466 LysR substrate binding domain EPB53_RS01235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB53_RS01240 PF01717 Cobalamin-independent synthase, Catalytic domain EPB53_RS01240 PF08267 Cobalamin-independent synthase, N-terminal domain EPB53_RS01245 PF01435 Peptidase family M48 EPB53_RS01285 PF00206 Lyase EPB53_RS01285 PF08328 Adenylosuccinate lyase C-terminal EPB53_RS01290 PF04356 Protein of unknown function (DUF489) EPB53_RS01300 PF00294 pfkB family carbohydrate kinase EPB53_RS01305 PF00816 H-NS histone family EPB53_RS01310 PF03553 Na+/H+ antiporter family EPB53_RS01315 PF01634 ATP phosphoribosyltransferase EPB53_RS01315 PF08029 HisG, C-terminal domain EPB53_RS01320 PF00815 Histidinol dehydrogenase EPB53_RS01330 PF00475 Imidazoleglycerol-phosphate dehydratase EPB53_RS01330 PF08645 Polynucleotide kinase 3 phosphatase EPB53_RS01335 PF00117 Glutamine amidotransferase class-I EPB53_RS01345 PF00977 Histidine biosynthesis protein EPB53_RS01350 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase EPB53_RS01350 PF01502 Phosphoribosyl-AMP cyclohydrolase EPB53_RS01355 PF00849 RNA pseudouridylate synthase EPB53_RS01365 PF00313 'Cold-shock' DNA-binding domain EPB53_RS01370 PF02617 ATP-dependent Clp protease adaptor protein ClpS EPB53_RS01375 PF02861 Clp amino terminal domain, pathogenicity island component EPB53_RS01375 PF07724 AAA domain (Cdc48 subfamily) EPB53_RS01375 PF00004 ATPase family associated with various cellular activities (AAA) EPB53_RS01375 PF17871 AAA lid domain EPB53_RS01375 PF10431 C-terminal, D2-small domain, of ClpB protein EPB53_RS01380 PF01176 Translation initiation factor 1A / IF-1 EPB53_RS01385 PF04377 Arginine-tRNA-protein transferase, C terminus EPB53_RS01385 PF04376 Arginine-tRNA-protein transferase, N terminus EPB53_RS01390 PF03588 Leucyl/phenylalanyl-tRNA protein transferase EPB53_RS01395 PF05433 Glycine zipper 2TM domain EPB53_RS01400 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EPB53_RS01405 PF10692 Protein of unknown function (DUF2498) EPB53_RS01410 PF08272 Topoisomerase I zinc-ribbon-like EPB53_RS01410 PF01131 DNA topoisomerase EPB53_RS01410 PF01751 Toprim domain EPB53_RS01410 PF01396 Topoisomerase DNA binding C4 zinc finger EPB53_RS01415 PF00483 Nucleotidyl transferase EPB53_RS01420 PF08323 Starch synthase catalytic domain EPB53_RS01420 PF00534 Glycosyl transferases group 1 EPB53_RS01430 PF04993 TfoX N-terminal domain EPB53_RS01430 PF04994 TfoX C-terminal domain EPB53_RS01435 PF00356 Bacterial regulatory proteins, lacI family EPB53_RS01440 PF02698 DUF218 domain EPB53_RS01445 PF13847 Methyltransferase domain EPB53_RS01455 PF04288 MukE-like family EPB53_RS01460 PF16330 MukB hinge domain EPB53_RS01460 PF04310 MukB N-terminal EPB53_RS01465 PF18030 RimK PreATP-grasp domain EPB53_RS01465 PF08443 RimK-like ATP-grasp domain EPB53_RS01475 PF08443 RimK-like ATP-grasp domain EPB53_RS01475 PF18030 RimK PreATP-grasp domain EPB53_RS01480 PF08003 Protein of unknown function (DUF1698) EPB53_RS01485 PF13649 Methyltransferase domain EPB53_RS01490 PF01904 Protein of unknown function DUF72 EPB53_RS01495 PF01336 OB-fold nucleic acid binding domain EPB53_RS01495 PF00152 tRNA synthetases class II (D, K and N) EPB53_RS01495 PF02938 GAD domain EPB53_RS01500 PF00265 Thymidine kinase EPB53_RS01505 PF02698 DUF218 domain EPB53_RS01520 PF01226 Formate/nitrite transporter EPB53_RS01530 PF00005 ABC transporter EPB53_RS01540 PF00528 Binding-protein-dependent transport system inner membrane component EPB53_RS01540 PF12911 N-terminal TM domain of oligopeptide transport permease C EPB53_RS01545 PF00528 Binding-protein-dependent transport system inner membrane component EPB53_RS01550 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EPB53_RS01555 PF03352 Methyladenine glycosylase EPB53_RS01555 PF00958 GMP synthase C terminal domain EPB53_RS01555 PF13673 Acetyltransferase (GNAT) domain EPB53_RS01555 PF00117 Glutamine amidotransferase class-I EPB53_RS01555 PF13302 Acetyltransferase (GNAT) domain EPB53_RS01565 PF13091 PLD-like domain EPB53_RS01565 PF13396 Phospholipase_D-nuclease N-terminal EPB53_RS01570 PF00209 Sodium:neurotransmitter symporter family EPB53_RS01575 PF00849 RNA pseudouridylate synthase EPB53_RS01580 PF01066 CDP-alcohol phosphatidyltransferase EPB53_RS01585 PF00005 ABC transporter EPB53_RS01595 PF13416 Bacterial extracellular solute-binding protein EPB53_RS01605 PF06945 Protein of unknown function (DUF1289) EPB53_RS01615 PF03222 Tryptophan/tyrosine permease family EPB53_RS01625 PF00375 Sodium:dicarboxylate symporter family EPB53_RS01635 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family EPB53_RS01640 PF01032 FecCD transport family EPB53_RS01645 PF00005 ABC transporter EPB53_RS01655 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EPB53_RS01660 PF00873 AcrB/AcrD/AcrF family EPB53_RS01685 PF03466 LysR substrate binding domain EPB53_RS01685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB53_RS01695 PF01863 Protein of unknown function DUF45 EPB53_RS01710 PF04204 Homoserine O-succinyltransferase EPB53_RS01725 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EPB53_RS01740 PF00072 Response regulator receiver domain EPB53_RS01740 PF01584 CheW-like domain EPB53_RS01750 PF17151 Periplasmic sensor domain EPB53_RS01750 PF00990 Diguanylate cyclase, GGDEF domain EPB53_RS01765 PF07690 Major Facilitator Superfamily EPB53_RS01780 PF00005 ABC transporter EPB53_RS01780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EPB53_RS01785 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EPB53_RS01785 PF00005 ABC transporter EPB53_RS01805 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EPB53_RS01810 PF00528 Binding-protein-dependent transport system inner membrane component EPB53_RS01825 PF00005 ABC transporter EPB53_RS01825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EPB53_RS01835 PF00356 Bacterial regulatory proteins, lacI family EPB53_RS01840 PF00722 Glycosyl hydrolases family 16 EPB53_RS01845 PF02264 LamB porin EPB53_RS01850 PF14310 Fibronectin type III-like domain EPB53_RS01850 PF01915 Glycosyl hydrolase family 3 C-terminal domain EPB53_RS01850 PF00933 Glycosyl hydrolase family 3 N terminal domain EPB53_RS01855 PF03390 2-hydroxycarboxylate transporter family EPB53_RS01860 PF03605 Anaerobic c4-dicarboxylate membrane transporter EPB53_RS01865 PF00072 Response regulator receiver domain EPB53_RS01865 PF04703 FaeA-like protein EPB53_RS01870 PF00989 PAS fold EPB53_RS01870 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain EPB53_RS01870 PF17203 Single cache domain 3 EPB53_RS01870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB53_RS01875 PF01867 CRISPR associated protein Cas1 EPB53_RS01880 PF18019 HD domain EPB53_RS01890 PF09614 CRISPR-associated protein (Cas_Csy2) EPB53_RS01895 PF09615 CRISPR-associated protein (Cas_Csy3) EPB53_RS01915 PF16527 Two-component sensor protein CpxA, periplasmic domain EPB53_RS01915 PF00512 His Kinase A (phospho-acceptor) domain EPB53_RS01915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB53_RS01915 PF00672 HAMP domain EPB53_RS01920 PF00072 Response regulator receiver domain EPB53_RS01920 PF00486 Transcriptional regulatory protein, C terminal EPB53_RS02015 PF03441 FAD binding domain of DNA photolyase EPB53_RS02015 PF00875 DNA photolyase EPB53_RS02020 PF01654 Cytochrome bd terminal oxidase subunit I EPB53_RS02025 PF02322 Cytochrome bd terminal oxidase subunit II EPB53_RS02030 PF17785 PUA-like domain EPB53_RS02030 PF10672 S-adenosylmethionine-dependent methyltransferase EPB53_RS02035 PF00708 Acylphosphatase EPB53_RS02040 PF04358 DsrC like protein EPB53_RS02045 PF01027 Inhibitor of apoptosis-promoting Bax1 EPB53_RS02050 PF00497 Bacterial extracellular solute-binding proteins, family 3 EPB53_RS02055 PF14824 Sirohaem biosynthesis protein central EPB53_RS02055 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EPB53_RS02055 PF10414 Sirohaem synthase dimerisation region EPB53_RS02065 PF04055 Radical SAM superfamily EPB53_RS02070 PF06508 Queuosine biosynthesis protein QueC EPB53_RS02085 PF00005 ABC transporter EPB53_RS02085 PF00664 ABC transporter transmembrane region EPB53_RS02090 PF00664 ABC transporter transmembrane region EPB53_RS02090 PF00005 ABC transporter EPB53_RS02100 PF00072 Response regulator receiver domain EPB53_RS02100 PF00486 Transcriptional regulatory protein, C terminal EPB53_RS02105 PF00512 His Kinase A (phospho-acceptor) domain EPB53_RS02105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB53_RS02105 PF00672 HAMP domain EPB53_RS02110 PF00012 Hsp70 protein EPB53_RS02115 PF00012 Hsp70 protein EPB53_RS02130 PF00672 HAMP domain EPB53_RS02130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB53_RS02145 PF00271 Helicase conserved C-terminal domain EPB53_RS02145 PF00270 DEAD/DEAH box helicase EPB53_RS02145 PF04408 Helicase associated domain (HA2) EPB53_RS02145 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold EPB53_RS02145 PF11898 Domain of unknown function (DUF3418) EPB53_RS02155 PF03466 LysR substrate binding domain EPB53_RS02155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB53_RS02160 PF07690 Major Facilitator Superfamily EPB53_RS02170 PF00563 EAL domain EPB53_RS02170 PF12792 CSS motif domain associated with EAL EPB53_RS02175 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EPB53_RS02180 PF04209 homogentisate 1,2-dioxygenase EPB53_RS02190 PF02798 Glutathione S-transferase, N-terminal domain EPB53_RS02190 PF14497 Glutathione S-transferase, C-terminal domain EPB53_RS02195 PF17912 MalK OB fold domain EPB53_RS02195 PF00005 ABC transporter EPB53_RS02200 PF00528 Binding-protein-dependent transport system inner membrane component EPB53_RS02205 PF00528 Binding-protein-dependent transport system inner membrane component EPB53_RS02210 PF13416 Bacterial extracellular solute-binding protein EPB53_RS02215 PF00753 Metallo-beta-lactamase superfamily EPB53_RS02225 PF00072 Response regulator receiver domain EPB53_RS02235 PF02895 Signal transducing histidine kinase, homodimeric domain EPB53_RS02235 PF09078 CheY binding EPB53_RS02235 PF01627 Hpt domain EPB53_RS02235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB53_RS02235 PF01584 CheW-like domain EPB53_RS02245 PF01584 CheW-like domain EPB53_RS02250 PF01739 CheR methyltransferase, SAM binding domain EPB53_RS02250 PF03705 CheR methyltransferase, all-alpha domain EPB53_RS02255 PF01339 CheB methylesterase EPB53_RS02255 PF00072 Response regulator receiver domain EPB53_RS02265 PF01618 MotA/TolQ/ExbB proton channel family EPB53_RS02270 PF01618 MotA/TolQ/ExbB proton channel family EPB53_RS02275 PF02472 Biopolymer transport protein ExbD/TolR EPB53_RS02280 PF03544 Gram-negative bacterial TonB protein C-terminal EPB53_RS02300 PF01554 MatE EPB53_RS02305 PF00677 Lumazine binding domain EPB53_RS02315 PF11849 Domain of unknown function (DUF3369) EPB53_RS02330 PF01906 Putative heavy-metal-binding EPB53_RS02335 PF03881 Fructosamine kinase EPB53_RS02345 PF00877 NlpC/P60 family EPB53_RS02355 PF03942 DTW domain EPB53_RS02360 PF00480 ROK family EPB53_RS02370 PF00994 Probable molybdopterin binding domain EPB53_RS02370 PF03453 MoeA N-terminal region (domain I and II) EPB53_RS02370 PF03454 MoeA C-terminal region (domain IV) EPB53_RS02375 PF12804 MobA-like NTP transferase domain EPB53_RS02380 PF00005 ABC transporter EPB53_RS02385 PF00528 Binding-protein-dependent transport system inner membrane component EPB53_RS02390 PF12849 PBP superfamily domain EPB53_RS02400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB53_RS02400 PF00512 His Kinase A (phospho-acceptor) domain EPB53_RS02405 PF02634 FdhD/NarQ family EPB53_RS02435 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EPB53_RS02435 PF01568 Molydopterin dinucleotide binding domain EPB53_RS02435 PF00384 Molybdopterin oxidoreductase EPB53_RS02440 PF13247 4Fe-4S dicluster domain EPB53_RS02455 PF02146 Sir2 family EPB53_RS02460 PF13416 Bacterial extracellular solute-binding protein EPB53_RS02465 PF13416 Bacterial extracellular solute-binding protein EPB53_RS02470 PF00528 Binding-protein-dependent transport system inner membrane component EPB53_RS02475 PF00528 Binding-protein-dependent transport system inner membrane component EPB53_RS02480 PF00005 ABC transporter EPB53_RS02480 PF08402 TOBE domain EPB53_RS02495 PF01171 PP-loop family EPB53_RS02505 PF00027 Cyclic nucleotide-binding domain EPB53_RS02505 PF13545 Crp-like helix-turn-helix domain EPB53_RS02520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB53_RS02520 PF00512 His Kinase A (phospho-acceptor) domain EPB53_RS02520 PF09308 LuxQ, periplasmic EPB53_RS02520 PF00072 Response regulator receiver domain EPB53_RS02530 PF17414 MatP C-terminal ribbon-helix-helix domain EPB53_RS02530 PF06303 MatP N-terminal domain EPB53_RS02535 PF05362 Lon protease (S16) C-terminal proteolytic domain EPB53_RS02535 PF13654 AAA domain EPB53_RS02540 PF07977 FabA-like domain EPB53_RS02545 PF04957 Ribosome modulation factor EPB53_RS02555 PF12848 ABC transporter EPB53_RS02555 PF16326 ABC transporter C-terminal domain EPB53_RS02555 PF00005 ABC transporter EPB53_RS02560 PF01170 Putative RNA methylase family UPF0020 EPB53_RS02560 PF02926 THUMP domain EPB53_RS02560 PF10672 S-adenosylmethionine-dependent methyltransferase EPB53_RS02565 PF07126 Cell-division protein ZapC EPB53_RS02570 PF01180 Dihydroorotate dehydrogenase EPB53_RS02595 PF17804 Tail specific protease N-terminal domain EPB53_RS02595 PF11818 C-terminal domain of tail specific protease (DUF3340) EPB53_RS02595 PF00595 PDZ domain EPB53_RS02595 PF03572 Peptidase family S41 EPB53_RS02600 PF17516 ProQ C-terminal domain EPB53_RS02600 PF04352 ProQ/FINO family EPB53_RS02605 PF13185 GAF domain EPB53_RS02610 PF00664 ABC transporter transmembrane region EPB53_RS02610 PF00005 ABC transporter EPB53_RS02615 PF04403 Paraquat-inducible protein A EPB53_RS02620 PF02470 MlaD protein EPB53_RS02625 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF EPB53_RS02625 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF EPB53_RS02625 PF01189 16S rRNA methyltransferase RsmB/F EPB53_RS02630 PF13509 S1 domain EPB53_RS02630 PF17783 CvfB-like winged helix domain EPB53_RS02650 PF00793 DAHP synthetase I family EPB53_RS02655 PF04461 Protein of unknown function (DUF520) EPB53_RS02665 PF01235 Sodium:alanine symporter family EPB53_RS02670 PF01810 LysE type translocator EPB53_RS02675 PF02374 Anion-transporting ATPase EPB53_RS02685 PF13722 5TM C-terminal transporter carbon starvation CstA EPB53_RS02685 PF02554 Carbon starvation protein CstA EPB53_RS02690 PF02074 Carboxypeptidase Taq (M32) metallopeptidase EPB53_RS02695 PF00132 Bacterial transferase hexapeptide (six repeats) EPB53_RS02695 PF14602 Hexapeptide repeat of succinyl-transferase EPB53_RS02695 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal EPB53_RS02700 PF00561 alpha/beta hydrolase fold EPB53_RS02725 PF00990 Diguanylate cyclase, GGDEF domain EPB53_RS02725 PF07694 5TMR of 5TMR-LYT EPB53_RS02740 PF02705 K+ potassium transporter EPB53_RS02750 PF00330 Aconitase family (aconitate hydratase) EPB53_RS02750 PF00694 Aconitase C-terminal domain EPB53_RS02755 PF00285 Citrate synthase, C-terminal domain EPB53_RS02780 PF02954 Bacterial regulatory protein, Fis family EPB53_RS02780 PF00158 Sigma-54 interaction domain EPB53_RS02780 PF00072 Response regulator receiver domain EPB53_RS02785 PF00512 His Kinase A (phospho-acceptor) domain EPB53_RS02785 PF00497 Bacterial extracellular solute-binding proteins, family 3 EPB53_RS02785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB53_RS02790 PF00939 Sodium:sulfate symporter transmembrane region EPB53_RS02795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB53_RS02795 PF00672 HAMP domain EPB53_RS02800 PF00842 Alanine racemase, C-terminal domain EPB53_RS02800 PF01168 Alanine racemase, N-terminal domain EPB53_RS02805 PF00892 EamA-like transporter family EPB53_RS02815 PF13302 Acetyltransferase (GNAT) domain EPB53_RS02820 PF00158 Sigma-54 interaction domain EPB53_RS02820 PF18024 Helix-turn-helix domain EPB53_RS02825 PF05128 Domain of unknown function (DUF697) EPB53_RS02830 PF04317 YcjX-like family, DUF463 EPB53_RS02845 PF00425 chorismate binding enzyme EPB53_RS02845 PF04715 Anthranilate synthase component I, N terminal region EPB53_RS02850 PF00293 NUDIX domain EPB53_RS02855 PF03222 Tryptophan/tyrosine permease family EPB53_RS02865 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EPB53_RS02875 PF02321 Outer membrane efflux protein EPB53_RS02880 PF01242 6-pyruvoyl tetrahydropterin synthase EPB53_RS02885 PF00152 tRNA synthetases class II (D, K and N) EPB53_RS02885 PF01336 OB-fold nucleic acid binding domain EPB53_RS02890 PF00155 Aminotransferase class I and II EPB53_RS02905 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EPB53_RS02905 PF00929 Exonuclease EPB53_RS02905 PF02811 PHP domain EPB53_RS02905 PF07733 Bacterial DNA polymerase III alpha NTPase domain EPB53_RS02905 PF14579 Helix-hairpin-helix motif EPB53_RS02910 PF00672 HAMP domain EPB53_RS02910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB53_RS02910 PF17200 Single Cache domain 2 EPB53_RS02915 PF02028 BCCT, betaine/carnitine/choline family transporter EPB53_RS02920 PF01047 MarR family EPB53_RS02935 PF00753 Metallo-beta-lactamase superfamily EPB53_RS02945 PF00925 GTP cyclohydrolase II EPB53_RS02955 PF03989 DNA gyrase C-terminal domain, beta-propeller EPB53_RS02955 PF00521 DNA gyrase/topoisomerase IV, subunit A EPB53_RS02965 PF00317 Ribonucleotide reductase, all-alpha domain EPB53_RS02965 PF03477 ATP cone domain EPB53_RS02965 PF02867 Ribonucleotide reductase, barrel domain EPB53_RS02970 PF00268 Ribonucleotide reductase, small chain EPB53_RS02975 PF00175 Oxidoreductase NAD-binding domain EPB53_RS02975 PF00111 2Fe-2S iron-sulfur cluster binding domain EPB53_RS02975 PF00970 Oxidoreductase FAD-binding domain EPB53_RS02985 PF00994 Probable molybdopterin binding domain EPB53_RS03005 PF03435 Saccharopine dehydrogenase NADP binding domain EPB53_RS03005 PF16653 Saccharopine dehydrogenase C-terminal domain EPB53_RS03010 PF00202 Aminotransferase class-III EPB53_RS03015 PF03334 Na+/H+ antiporter subunit EPB53_RS03020 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) EPB53_RS03025 PF01899 Na+/H+ ion antiporter subunit EPB53_RS03030 PF00361 Proton-conducting membrane transporter EPB53_RS03035 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L EPB53_RS03040 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter EPB53_RS03045 PF00361 Proton-conducting membrane transporter EPB53_RS03045 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus EPB53_RS03045 PF13244 Domain of unknown function (DUF4040) EPB53_RS03050 PF06965 Na+/H+ antiporter 1 EPB53_RS03065 PF00005 ABC transporter EPB53_RS03070 PF01554 MatE EPB53_RS03075 PF13460 NAD(P)H-binding EPB53_RS03075 PF11066 Protein of unknown function (DUF2867) EPB53_RS03080 PF00561 alpha/beta hydrolase fold EPB53_RS03085 PF03280 Proteobacterial lipase chaperone protein EPB53_RS03095 PF07690 Major Facilitator Superfamily EPB53_RS03100 PF01479 S4 domain EPB53_RS03100 PF00849 RNA pseudouridylate synthase EPB53_RS03105 PF00271 Helicase conserved C-terminal domain EPB53_RS03105 PF04851 Type III restriction enzyme, res subunit EPB53_RS03110 PF01386 Ribosomal L25p family EPB53_RS03115 PF00672 HAMP domain EPB53_RS03115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB53_RS03115 PF12729 Four helix bundle sensory module for signal transduction EPB53_RS03125 PF03466 LysR substrate binding domain EPB53_RS03125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB53_RS03135 PF00005 ABC transporter EPB53_RS03150 PF11953 Domain of unknown function (DUF3470) EPB53_RS03150 PF00037 4Fe-4S binding domain EPB53_RS03155 PF00588 SpoU rRNA Methylase family EPB53_RS03155 PF08032 RNA 2'-O ribose methyltransferase substrate binding EPB53_RS03165 PF03466 LysR substrate binding domain EPB53_RS03165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB53_RS03195 PF03306 Alpha-acetolactate decarboxylase EPB53_RS03200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB53_RS03200 PF03466 LysR substrate binding domain EPB53_RS03210 PF08411 Exonuclease C-terminal EPB53_RS03210 PF00929 Exonuclease EPB53_RS03215 PF03788 LrgA family EPB53_RS03220 PF04172 LrgB-like family EPB53_RS03225 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region EPB53_RS03225 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EPB53_RS03235 PF00872 Transposase, Mutator family EPB53_RS03245 PF02222 ATP-grasp domain EPB53_RS03250 PF13426 PAS domain EPB53_RS03250 PF08447 PAS fold EPB53_RS03250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB53_RS03255 PF05724 Thiopurine S-methyltransferase (TPMT) EPB53_RS03260 PF05488 PAAR motif EPB53_RS03270 PF00216 Bacterial DNA-binding protein EPB53_RS03275 PF03484 tRNA synthetase B5 domain EPB53_RS03275 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain EPB53_RS03275 PF01588 Putative tRNA binding domain EPB53_RS03275 PF03147 Ferredoxin-fold anticodon binding domain EPB53_RS03275 PF03483 B3/4 domain EPB53_RS03280 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain EPB53_RS03280 PF01409 tRNA synthetases class II core domain (F) EPB53_RS03285 PF00583 Acetyltransferase (GNAT) family EPB53_RS03290 PF03466 LysR substrate binding domain EPB53_RS03290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB53_RS03325 PF00072 Response regulator receiver domain EPB53_RS03325 PF00196 Bacterial regulatory proteins, luxR family EPB53_RS03340 PF00136 DNA polymerase family B EPB53_RS03340 PF03104 DNA polymerase family B, exonuclease domain EPB53_RS03350 PF01132 Elongation factor P (EF-P) OB domain EPB53_RS03350 PF08207 Elongation factor P (EF-P) KOW-like domain EPB53_RS03350 PF09285 Elongation factor P, C-terminal EPB53_RS03355 PF04269 Protein of unknown function, DUF440 EPB53_RS03360 PF04266 ASCH domain EPB53_RS03365 PF00392 Bacterial regulatory proteins, gntR family EPB53_RS03365 PF07702 UTRA domain EPB53_RS03380 PF01175 Urocanase Rossmann-like domain EPB53_RS03380 PF17392 Urocanase C-terminal domain EPB53_RS03380 PF17391 Urocanase N-terminal domain EPB53_RS03385 PF00221 Aromatic amino acid lyase EPB53_RS03415 PF04191 Phospholipid methyltransferase EPB53_RS03420 PF13183 4Fe-4S dicluster domain EPB53_RS03420 PF01565 FAD binding domain EPB53_RS03420 PF02913 FAD linked oxidases, C-terminal domain EPB53_RS03435 PF13488 Glycine zipper EPB53_RS03435 PF00691 OmpA family EPB53_RS03455 PF01259 SAICAR synthetase EPB53_RS03465 PF03949 Malic enzyme, NAD binding domain EPB53_RS03465 PF00390 Malic enzyme, N-terminal domain EPB53_RS03475 PF02698 DUF218 domain EPB53_RS03485 PF00266 Aminotransferase class-V EPB53_RS03505 PF07992 Pyridine nucleotide-disulphide oxidoreductase EPB53_RS03510 PF00005 ABC transporter EPB53_RS03510 PF00664 ABC transporter transmembrane region EPB53_RS03515 PF00664 ABC transporter transmembrane region EPB53_RS03515 PF00005 ABC transporter EPB53_RS03530 PF01300 Telomere recombination EPB53_RS03535 PF02811 PHP domain EPB53_RS03540 PF08056 Tryptophan operon leader peptide EPB53_RS03545 PF00425 chorismate binding enzyme EPB53_RS03545 PF04715 Anthranilate synthase component I, N terminal region EPB53_RS03550 PF00117 Glutamine amidotransferase class-I EPB53_RS03555 PF00591 Glycosyl transferase family, a/b domain EPB53_RS03555 PF02885 Glycosyl transferase family, helical bundle domain EPB53_RS03560 PF00218 Indole-3-glycerol phosphate synthase EPB53_RS03560 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase EPB53_RS03565 PF00291 Pyridoxal-phosphate dependent enzyme EPB53_RS03570 PF00290 Tryptophan synthase alpha chain EPB53_RS03575 PF06965 Na+/H+ antiporter 1 EPB53_RS03580 PF04279 Intracellular septation protein A EPB53_RS03585 PF03061 Thioesterase superfamily EPB53_RS03590 PF03795 YCII-related domain EPB53_RS03605 PF08241 Methyltransferase domain EPB53_RS03620 PF00202 Aminotransferase class-III EPB53_RS03625 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EPB53_RS03625 PF02403 Seryl-tRNA synthetase N-terminal domain EPB53_RS03630 PF12002 MgsA AAA+ ATPase C terminal EPB53_RS03630 PF16193 AAA C-terminal domain EPB53_RS03630 PF00004 ATPase family associated with various cellular activities (AAA) EPB53_RS03635 PF03548 Outer membrane lipoprotein carrier protein LolA EPB53_RS03640 PF01043 SecA preprotein cross-linking domain EPB53_RS03640 PF07516 SecA Wing and Scaffold domain EPB53_RS03640 PF02810 SEC-C motif EPB53_RS03640 PF07517 SecA DEAD-like domain EPB53_RS03645 PF01207 Dihydrouridine synthase (Dus) EPB53_RS03650 PF04217 Protein of unknown function, DUF412 EPB53_RS03655 PF00871 Acetokinase family EPB53_RS03660 PF01515 Phosphate acetyl/butaryl transferase EPB53_RS03660 PF07085 DRTGG domain EPB53_RS03665 PF13409 Glutathione S-transferase, N-terminal domain EPB53_RS03670 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EPB53_RS03670 PF00005 ABC transporter EPB53_RS03675 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EPB53_RS03675 PF00005 ABC transporter EPB53_RS03680 PF00528 Binding-protein-dependent transport system inner membrane component EPB53_RS03680 PF12911 N-terminal TM domain of oligopeptide transport permease C EPB53_RS03685 PF00528 Binding-protein-dependent transport system inner membrane component EPB53_RS03690 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EPB53_RS03700 PF00294 pfkB family carbohydrate kinase EPB53_RS03705 PF00251 Glycosyl hydrolases family 32 N-terminal domain EPB53_RS03705 PF08244 Glycosyl hydrolases family 32 C terminal EPB53_RS03715 PF00367 phosphotransferase system, EIIB EPB53_RS03715 PF02378 Phosphotransferase system, EIIC EPB53_RS03720 PF08543 Phosphomethylpyrimidine kinase EPB53_RS03725 PF00232 Glycosyl hydrolase family 1 EPB53_RS03730 PF00356 Bacterial regulatory proteins, lacI family EPB53_RS03745 PF02903 Alpha amylase, N-terminal ig-like domain EPB53_RS03745 PF00128 Alpha amylase, catalytic domain EPB53_RS03750 PF02028 BCCT, betaine/carnitine/choline family transporter EPB53_RS03775 PF00672 HAMP domain EPB53_RS03775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB53_RS03780 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain EPB53_RS03780 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EPB53_RS03795 PF17200 Single Cache domain 2 EPB53_RS03795 PF00672 HAMP domain EPB53_RS03795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB53_RS03800 PF00593 TonB dependent receptor EPB53_RS03800 PF07715 TonB-dependent Receptor Plug Domain EPB53_RS03805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB53_RS03805 PF03466 LysR substrate binding domain EPB53_RS03810 PF01810 LysE type translocator EPB53_RS03820 PF00128 Alpha amylase, catalytic domain EPB53_RS03825 PF12848 ABC transporter EPB53_RS03825 PF16326 ABC transporter C-terminal domain EPB53_RS03825 PF00005 ABC transporter EPB53_RS03855 PF01497 Periplasmic binding protein EPB53_RS03860 PF07715 TonB-dependent Receptor Plug Domain EPB53_RS03870 PF01042 Endoribonuclease L-PSP EPB53_RS03875 PF10282 Lactonase, 7-bladed beta-propeller EPB53_RS03880 PF00728 Glycosyl hydrolase family 20, catalytic domain EPB53_RS03880 PF02838 Glycosyl hydrolase family 20, domain 2 EPB53_RS03885 PF01081 KDPG and KHG aldolase EPB53_RS03895 PF00474 Sodium:solute symporter family EPB53_RS03905 PF07969 Amidohydrolase family EPB53_RS03915 PF01380 SIS domain EPB53_RS03915 PF01418 Helix-turn-helix domain, rpiR family EPB53_RS03915 PF02685 Glucokinase EPB53_RS03925 PF01915 Glycosyl hydrolase family 3 C-terminal domain EPB53_RS03925 PF00933 Glycosyl hydrolase family 3 N terminal domain EPB53_RS03930 PF02653 Branched-chain amino acid transport system / permease component EPB53_RS03950 PF00892 EamA-like transporter family EPB53_RS03960 PF00501 AMP-binding enzyme EPB53_RS03960 PF13193 AMP-binding enzyme C-terminal domain EPB53_RS03965 PF01758 Sodium Bile acid symporter family EPB53_RS03975 PF01717 Cobalamin-independent synthase, Catalytic domain EPB53_RS03975 PF08267 Cobalamin-independent synthase, N-terminal domain EPB53_RS04035 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EPB53_RS04045 PF01037 Lrp/AsnC ligand binding domain EPB53_RS04045 PF13404 AsnC-type helix-turn-helix domain EPB53_RS04050 PF00291 Pyridoxal-phosphate dependent enzyme EPB53_RS04055 PF04170 NlpE N-terminal domain EPB53_RS04055 PF17185 NlpE C-terminal OB domain EPB53_RS04075 PF07690 Major Facilitator Superfamily EPB53_RS04080 PF00501 AMP-binding enzyme EPB53_RS04080 PF13193 AMP-binding enzyme C-terminal domain EPB53_RS04085 PF13378 Enolase C-terminal domain-like EPB53_RS04095 PF12697 Alpha/beta hydrolase family EPB53_RS04100 PF16582 Middle domain of thiamine pyrophosphate EPB53_RS04100 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EPB53_RS04100 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EPB53_RS04105 PF00425 chorismate binding enzyme EPB53_RS04110 PF00155 Aminotransferase class I and II EPB53_RS04130 PF13808 DDE_Tnp_1-associated EPB53_RS04130 PF01609 Transposase DDE domain EPB53_RS04135 PF12464 Maltose acetyltransferase EPB53_RS04135 PF00132 Bacterial transferase hexapeptide (six repeats) EPB53_RS04140 PF00664 ABC transporter transmembrane region EPB53_RS04140 PF00005 ABC transporter EPB53_RS04140 PF03412 Peptidase C39 family EPB53_RS04185 PF13286 Phosphohydrolase-associated domain EPB53_RS04185 PF01966 HD domain EPB53_RS04200 PF08496 Peptidase family S49 N-terminal EPB53_RS04200 PF01343 Peptidase family S49 EPB53_RS04205 PF00106 short chain dehydrogenase EPB53_RS04210 PF00072 Response regulator receiver domain EPB53_RS04210 PF01584 CheW-like domain EPB53_RS04215 PF00480 ROK family EPB53_RS04220 PF02887 Pyruvate kinase, alpha/beta domain EPB53_RS04220 PF00224 Pyruvate kinase, barrel domain EPB53_RS04225 PF01734 Patatin-like phospholipase EPB53_RS04240 PF00209 Sodium:neurotransmitter symporter family EPB53_RS04255 PF01609 Transposase DDE domain EPB53_RS04255 PF13808 DDE_Tnp_1-associated EPB53_RS04260 PF02378 Phosphotransferase system, EIIC EPB53_RS04260 PF00367 phosphotransferase system, EIIB EPB53_RS04265 PF01026 TatD related DNase EPB53_RS04270 PF09115 DNA polymerase III, delta subunit, C terminal EPB53_RS04275 PF02223 Thymidylate kinase EPB53_RS04280 PF02618 YceG-like family EPB53_RS04285 PF01063 Amino-transferase class IV EPB53_RS04290 PF00109 Beta-ketoacyl synthase, N-terminal domain EPB53_RS04290 PF02801 Beta-ketoacyl synthase, C-terminal domain EPB53_RS04295 PF00550 Phosphopantetheine attachment site EPB53_RS04305 PF00698 Acyl transferase domain EPB53_RS04310 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EPB53_RS04310 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EPB53_RS04320 PF01783 Ribosomal L32p protein family EPB53_RS04325 PF02620 Large ribosomal RNA subunit accumulation protein YceD EPB53_RS04330 PF02545 Maf-like protein EPB53_RS04335 PF01479 S4 domain EPB53_RS04335 PF00849 RNA pseudouridylate synthase EPB53_RS04340 PF00575 S1 RNA binding domain EPB53_RS04340 PF10150 Ribonuclease E/G family EPB53_RS04340 PF12111 Polyribonucleotide phosphorylase C terminal EPB53_RS04350 PF05728 Uncharacterised protein family (UPF0227) EPB53_RS04360 PF08139 Prokaryotic membrane lipoprotein lipid attachment site EPB53_RS04360 PF13036 Peptidoglycan-synthase activator LpoB EPB53_RS04375 PF01230 HIT domain EPB53_RS04380 PF00672 HAMP domain EPB53_RS04380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB53_RS04380 PF17200 Single Cache domain 2 EPB53_RS04390 PF07840 FadR C-terminal domain EPB53_RS04390 PF00392 Bacterial regulatory proteins, gntR family EPB53_RS04395 PF06450 Bacterial Na+/H+ antiporter B (NhaB) EPB53_RS04410 PF06481 COX Aromatic Rich Motif EPB53_RS04410 PF00116 Cytochrome C oxidase subunit II, periplasmic domain EPB53_RS04420 PF00510 Cytochrome c oxidase subunit III EPB53_RS04425 PF03626 Prokaryotic Cytochrome C oxidase subunit IV EPB53_RS04430 PF01040 UbiA prenyltransferase family EPB53_RS04455 PF01037 Lrp/AsnC ligand binding domain EPB53_RS04475 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) EPB53_RS04480 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family EPB53_RS04485 PF18073 Rubredoxin metal binding domain EPB53_RS04490 PF06305 Lipopolysaccharide assembly protein A domain EPB53_RS04495 PF00216 Bacterial DNA-binding protein EPB53_RS04500 PF00575 S1 RNA binding domain EPB53_RS04505 PF02224 Cytidylate kinase EPB53_RS04515 PF13145 PPIC-type PPIASE domain EPB53_RS04520 PF00216 Bacterial DNA-binding protein EPB53_RS04525 PF05362 Lon protease (S16) C-terminal proteolytic domain EPB53_RS04525 PF00004 ATPase family associated with various cellular activities (AAA) EPB53_RS04525 PF02190 ATP-dependent protease La (LON) substrate-binding domain EPB53_RS04530 PF06689 ClpX C4-type zinc finger EPB53_RS04530 PF10431 C-terminal, D2-small domain, of ClpB protein EPB53_RS04530 PF07724 AAA domain (Cdc48 subfamily) EPB53_RS04535 PF00574 Clp protease EPB53_RS04540 PF05698 Bacterial trigger factor protein (TF) C-terminus EPB53_RS04540 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EPB53_RS04540 PF05697 Bacterial trigger factor protein (TF) EPB53_RS04545 PF02696 Uncharacterized ACR, YdiU/UPF0061 family EPB53_RS04550 PF03313 Serine dehydratase alpha chain EPB53_RS04550 PF03315 Serine dehydratase beta chain EPB53_RS04560 PF00583 Acetyltransferase (GNAT) family EPB53_RS04560 PF00795 Carbon-nitrogen hydrolase EPB53_RS04575 PF12792 CSS motif domain associated with EAL EPB53_RS04575 PF00563 EAL domain EPB53_RS04580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB53_RS04580 PF08447 PAS fold EPB53_RS04590 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain EPB53_RS04590 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain EPB53_RS04595 PF01773 Na+ dependent nucleoside transporter N-terminus EPB53_RS04595 PF07662 Na+ dependent nucleoside transporter C-terminus EPB53_RS04595 PF07670 Nucleoside recognition EPB53_RS04605 PF01627 Hpt domain EPB53_RS04610 PF00158 Sigma-54 interaction domain EPB53_RS04610 PF02954 Bacterial regulatory protein, Fis family EPB53_RS04610 PF00072 Response regulator receiver domain EPB53_RS04615 PF17757 UvrB interaction domain EPB53_RS04615 PF12344 Ultra-violet resistance protein B EPB53_RS04615 PF04851 Type III restriction enzyme, res subunit EPB53_RS04615 PF00271 Helicase conserved C-terminal domain EPB53_RS04615 PF02151 UvrB/uvrC motif EPB53_RS04625 PF00375 Sodium:dicarboxylate symporter family EPB53_RS04635 PF00578 AhpC/TSA family EPB53_RS04640 PF02683 Cytochrome C biogenesis protein transmembrane region EPB53_RS04640 PF11412 Disulphide bond corrector protein DsbC EPB53_RS04650 PF02508 Rnf-Nqr subunit, membrane protein EPB53_RS04655 PF04060 Putative Fe-S cluster EPB53_RS04660 PF10531 SLBB domain EPB53_RS04660 PF12838 4Fe-4S dicluster domain EPB53_RS04660 PF13375 RnfC Barrel sandwich hybrid domain EPB53_RS04660 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit EPB53_RS04665 PF03116 NQR2, RnfD, RnfE family EPB53_RS04670 PF04205 FMN-binding domain EPB53_RS04675 PF02508 Rnf-Nqr subunit, membrane protein EPB53_RS04680 PF10576 Iron-sulfur binding domain of endonuclease III EPB53_RS04680 PF00730 HhH-GPD superfamily base excision DNA repair protein EPB53_RS04680 PF00633 Helix-hairpin-helix motif EPB53_RS04685 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EPB53_RS04690 PF00691 OmpA family EPB53_RS04690 PF18393 MotY N-terminal domain EPB53_RS04695 PF00929 Exonuclease EPB53_RS04705 PF00156 Phosphoribosyl transferase domain EPB53_RS04710 PF02674 Colicin V production protein EPB53_RS04715 PF05036 Sporulation related domain EPB53_RS04720 PF02875 Mur ligase family, glutamate ligase domain EPB53_RS04720 PF08245 Mur ligase middle domain EPB53_RS04725 PF17848 Acetyl-coA carboxylase zinc finger domain EPB53_RS04725 PF01039 Carboxyl transferase domain EPB53_RS04730 PF01416 tRNA pseudouridine synthase EPB53_RS04745 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain EPB53_RS04745 PF00749 tRNA synthetases class I (E and Q), catalytic domain EPB53_RS04750 PF02378 Phosphotransferase system, EIIC EPB53_RS04750 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EPB53_RS04750 PF00367 phosphotransferase system, EIIB EPB53_RS04755 PF01979 Amidohydrolase family EPB53_RS04760 PF01047 MarR family EPB53_RS04760 PF00480 ROK family EPB53_RS04765 PF13537 Glutamine amidotransferase domain EPB53_RS04765 PF00733 Asparagine synthase EPB53_RS04770 PF02357 Transcription termination factor nusG EPB53_RS04785 PF00872 Transposase, Mutator family EPB53_RS04795 PF00762 Ferrochelatase EPB53_RS04800 PF05191 Adenylate kinase, active site lid EPB53_RS04805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB53_RS04805 PF00183 Hsp90 protein EPB53_RS04810 PF00486 Transcriptional regulatory protein, C terminal EPB53_RS04815 PF17323 Trans-membrane regulatory protein ToxS EPB53_RS04825 PF12850 Calcineurin-like phosphoesterase superfamily domain EPB53_RS04830 PF01370 NAD dependent epimerase/dehydratase family EPB53_RS04830 PF08338 Domain of unknown function (DUF1731) EPB53_RS04835 PF00106 short chain dehydrogenase EPB53_RS04840 PF00085 Thioredoxin EPB53_RS04845 PF01145 SPFH domain / Band 7 family EPB53_RS04845 PF16200 C-terminal region of band_7 EPB53_RS04850 PF01957 NfeD-like C-terminal, partner-binding EPB53_RS04855 PF13411 MerR HTH family regulatory protein EPB53_RS04860 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) EPB53_RS04865 PF13609 Gram-negative porin EPB53_RS04870 PF03120 NAD-dependent DNA ligase OB-fold domain EPB53_RS04870 PF03119 NAD-dependent DNA ligase C4 zinc finger domain EPB53_RS04870 PF12826 Helix-hairpin-helix motif EPB53_RS04870 PF00533 BRCA1 C Terminus (BRCT) domain EPB53_RS04870 PF01653 NAD-dependent DNA ligase adenylation domain EPB53_RS04875 PF04354 ZipA, C-terminal FtsZ-binding domain EPB53_RS04885 PF00291 Pyridoxal-phosphate dependent enzyme EPB53_RS04895 PF00381 PTS HPr component phosphorylation site EPB53_RS04900 PF02896 PEP-utilising enzyme, TIM barrel domain EPB53_RS04900 PF00391 PEP-utilising enzyme, mobile domain EPB53_RS04900 PF05524 PEP-utilising enzyme, N-terminal EPB53_RS04905 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EPB53_RS04910 PF01494 FAD binding domain EPB53_RS04915 PF00919 Uncharacterized protein family UPF0004 EPB53_RS04915 PF04055 Radical SAM superfamily EPB53_RS04915 PF01938 TRAM domain EPB53_RS04920 PF02562 PhoH-like protein EPB53_RS04925 PF02130 Uncharacterized protein family UPF0054 EPB53_RS04930 PF00571 CBS domain EPB53_RS04930 PF03471 Transporter associated domain EPB53_RS04935 PF00795 Carbon-nitrogen hydrolase EPB53_RS04940 PF07295 Zinc-ribbon containing domain EPB53_RS04950 PF04390 Lipopolysaccharide-assembly EPB53_RS04955 PF14840 Processivity clamp loader gamma complex DNA pol III C-term EPB53_RS04955 PF06144 DNA polymerase III, delta subunit EPB53_RS04965 PF02590 Predicted SPOUT methyltransferase EPB53_RS04970 PF03717 Penicillin-binding Protein dimerisation domain EPB53_RS04970 PF00905 Penicillin binding protein transpeptidase domain EPB53_RS04975 PF01098 Cell cycle protein EPB53_RS04980 PF05036 Sporulation related domain EPB53_RS04980 PF03330 Lytic transglycolase EPB53_RS04985 PF00768 D-alanyl-D-alanine carboxypeptidase EPB53_RS04985 PF07943 Penicillin-binding protein 5, C-terminal domain EPB53_RS04990 PF04359 Protein of unknown function (DUF493) EPB53_RS04995 PF03099 Biotin/lipoate A/B protein ligase family EPB53_RS05000 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family EPB53_RS05000 PF04055 Radical SAM superfamily EPB53_RS05005 PF00464 Serine hydroxymethyltransferase EPB53_RS05015 PF00873 AcrB/AcrD/AcrF family EPB53_RS05020 PF13533 Biotin-lipoyl like EPB53_RS05050 PF00367 phosphotransferase system, EIIB EPB53_RS05050 PF02378 Phosphotransferase system, EIIC EPB53_RS05055 PF00356 Bacterial regulatory proteins, lacI family EPB53_RS05065 PF00005 ABC transporter EPB53_RS05065 PF09383 NIL domain EPB53_RS05070 PF00528 Binding-protein-dependent transport system inner membrane component EPB53_RS05075 PF03180 NLPA lipoprotein EPB53_RS05080 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) EPB53_RS05085 PF07348 Syd protein (SUKH-2) EPB53_RS05090 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term EPB53_RS05090 PF14489 QueF-like protein EPB53_RS05105 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases EPB53_RS05105 PF03641 Possible lysine decarboxylase EPB53_RS05105 PF11892 Domain of unknown function (DUF3412) EPB53_RS05110 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EPB53_RS05110 PF01367 5'-3' exonuclease, C-terminal SAM fold EPB53_RS05115 PF18125 RlmM ferredoxin-like domain EPB53_RS05115 PF01728 FtsJ-like methyltransferase EPB53_RS05120 PF04241 Protein of unknown function (DUF423) EPB53_RS05130 PF03466 LysR substrate binding domain EPB53_RS05130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB53_RS05135 PF02568 Thiamine biosynthesis protein (ThiI) EPB53_RS05135 PF02926 THUMP domain EPB53_RS05145 PF01618 MotA/TolQ/ExbB proton channel family EPB53_RS05150 PF02609 Exonuclease VII small subunit EPB53_RS05155 PF00348 Polyprenyl synthetase EPB53_RS05160 PF02780 Transketolase, C-terminal domain EPB53_RS05160 PF02779 Transketolase, pyrimidine binding domain EPB53_RS05160 PF13292 1-deoxy-D-xylulose-5-phosphate synthase EPB53_RS05165 PF00849 RNA pseudouridylate synthase EPB53_RS05170 PF04287 tRNA pseudouridine synthase C EPB53_RS05195 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 EPB53_RS05200 PF03806 AbgT putative transporter family EPB53_RS05205 PF00444 Ribosomal protein L36 EPB53_RS05210 PF01197 Ribosomal protein L31 EPB53_RS05215 PF18389 TrmO C-terminal domain EPB53_RS05215 PF01980 tRNA-methyltransferase O EPB53_RS05220 PF04073 Aminoacyl-tRNA editing domain EPB53_RS05220 PF03129 Anticodon binding domain EPB53_RS05220 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EPB53_RS05225 PF06786 Uncharacterised protein family (UPF0253) EPB53_RS05240 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain EPB53_RS05240 PF02769 AIR synthase related protein, C-terminal domain EPB53_RS05240 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal EPB53_RS05245 PF00497 Bacterial extracellular solute-binding proteins, family 3 EPB53_RS05245 PF01464 Transglycosylase SLT domain EPB53_RS05250 PF14437 MafB19-like deaminase EPB53_RS05255 PF03466 LysR substrate binding domain EPB53_RS05255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB53_RS05260 PF08240 Alcohol dehydrogenase GroES-like domain EPB53_RS05260 PF00107 Zinc-binding dehydrogenase EPB53_RS05265 PF00756 Putative esterase EPB53_RS05270 PF03806 AbgT putative transporter family EPB53_RS05295 PF07963 Prokaryotic N-terminal methylation motif EPB53_RS05295 PF00114 Pilin (bacterial filament) EPB53_RS05310 PF00684 DnaJ central domain EPB53_RS05310 PF00226 DnaJ domain EPB53_RS05310 PF01556 DnaJ C terminal domain EPB53_RS05315 PF00012 Hsp70 protein EPB53_RS05320 PF01025 GrpE EPB53_RS05325 PF01513 ATP-NAD kinase EPB53_RS05330 PF02463 RecF/RecN/SMC N terminal domain EPB53_RS05335 PF04355 SmpA / OmlA family EPB53_RS05340 PF03658 RnfH family Ubiquitin EPB53_RS05345 PF03364 Polyketide cyclase / dehydrase and lipid transport EPB53_RS05350 PF01668 SmpB protein EPB53_RS05360 PF13356 Arm DNA-binding domain EPB53_RS05360 PF00589 Phage integrase family EPB53_RS05370 PF01555 DNA methylase EPB53_RS05375 PF01555 DNA methylase EPB53_RS05385 PF00271 Helicase conserved C-terminal domain EPB53_RS05385 PF00176 SNF2 family N-terminal domain EPB53_RS05420 PF04002 RadC-like JAB domain EPB53_RS05450 PF01926 50S ribosome-binding GTPase EPB53_RS05450 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal EPB53_RS05460 PF00075 RNase H EPB53_RS05490 PF09278 MerR, DNA binding EPB53_RS05490 PF00376 MerR family regulatory protein EPB53_RS05495 PF03180 NLPA lipoprotein EPB53_RS05510 PF02028 BCCT, betaine/carnitine/choline family transporter EPB53_RS05515 PF02743 Cache domain EPB53_RS05515 PF00672 HAMP domain EPB53_RS05515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB53_RS05520 PF07968 Leukocidin/Hemolysin toxin family EPB53_RS05520 PF12563 Hemolytic toxin N terminal EPB53_RS05520 PF16458 Beta-prism lectin EPB53_RS05525 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus EPB53_RS05525 PF00561 alpha/beta hydrolase fold EPB53_RS05535 PF00106 short chain dehydrogenase EPB53_RS05635 PF03448 MgtE intracellular N domain EPB53_RS05635 PF01769 Divalent cation transporter EPB53_RS05635 PF00571 CBS domain EPB53_RS05645 PF00571 CBS domain EPB53_RS05645 PF01769 Divalent cation transporter EPB53_RS05645 PF03448 MgtE intracellular N domain EPB53_RS05660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB53_RS05660 PF03466 LysR substrate binding domain EPB53_RS05665 PF01266 FAD dependent oxidoreductase EPB53_RS05670 PF01235 Sodium:alanine symporter family EPB53_RS05680 PF07670 Nucleoside recognition EPB53_RS05690 PF01470 Pyroglutamyl peptidase EPB53_RS05695 PF01184 GPR1/FUN34/yaaH family EPB53_RS05700 PF02028 BCCT, betaine/carnitine/choline family transporter EPB53_RS05715 PF13361 UvrD-like helicase C-terminal domain EPB53_RS05715 PF00580 UvrD/REP helicase N-terminal domain EPB53_RS05725 PF00958 GMP synthase C terminal domain EPB53_RS05725 PF00117 Glutamine amidotransferase class-I EPB53_RS05725 PF02540 NAD synthase EPB53_RS05730 PF00571 CBS domain EPB53_RS05730 PF00478 IMP dehydrogenase / GMP reductase domain EPB53_RS05735 PF02601 Exonuclease VII, large subunit EPB53_RS05735 PF13742 OB-fold nucleic acid binding domain EPB53_RS05745 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal EPB53_RS05745 PF01926 50S ribosome-binding GTPase EPB53_RS05750 PF13360 PQQ-like domain EPB53_RS05755 PF09976 Tetratricopeptide repeat-like domain EPB53_RS05760 PF03129 Anticodon binding domain EPB53_RS05760 PF13393 Histidyl-tRNA synthetase EPB53_RS05765 PF04551 GcpE protein EPB53_RS05770 PF13464 Domain of unknown function (DUF4115) EPB53_RS05775 PF04055 Radical SAM superfamily EPB53_RS05780 PF00334 Nucleoside diphosphate kinase EPB53_RS05785 PF00883 Cytosol aminopeptidase family, catalytic domain EPB53_RS05785 PF12404 Peptidase EPB53_RS05790 PF00266 Aminotransferase class-V EPB53_RS05795 PF02082 Transcriptional regulator EPB53_RS05800 PF00588 SpoU rRNA Methylase family EPB53_RS05810 PF02355 Protein export membrane protein EPB53_RS05810 PF07549 SecD/SecF GG Motif EPB53_RS05815 PF13721 SecD export protein N-terminal TM region EPB53_RS05815 PF07549 SecD/SecF GG Motif EPB53_RS05815 PF02355 Protein export membrane protein EPB53_RS05820 PF02699 Preprotein translocase subunit EPB53_RS05825 PF01702 Queuine tRNA-ribosyltransferase EPB53_RS05830 PF02547 Queuosine biosynthesis protein EPB53_RS05835 PF00571 CBS domain EPB53_RS05840 PF00463 Isocitrate lyase family EPB53_RS05845 PF01274 Malate synthase EPB53_RS05850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB53_RS05850 PF03466 LysR substrate binding domain EPB53_RS05855 PF10417 C-terminal domain of 1-Cys peroxiredoxin EPB53_RS05855 PF00578 AhpC/TSA family EPB53_RS05860 PF03932 CutC family EPB53_RS05865 PF01895 PhoU domain EPB53_RS05870 PF00005 ABC transporter EPB53_RS05875 PF00528 Binding-protein-dependent transport system inner membrane component EPB53_RS05880 PF00528 Binding-protein-dependent transport system inner membrane component EPB53_RS05885 PF13090 Polyphosphate kinase C-terminal domain 2 EPB53_RS05885 PF13089 Polyphosphate kinase N-terminal domain EPB53_RS05885 PF17941 Polyphosphate kinase C-terminal domain 1 EPB53_RS05885 PF02503 Polyphosphate kinase middle domain EPB53_RS05890 PF02541 Ppx/GppA phosphatase family EPB53_RS05895 PF12849 PBP superfamily domain EPB53_RS05900 PF00512 His Kinase A (phospho-acceptor) domain EPB53_RS05900 PF11808 Phosphate regulon sensor protein PhoR EPB53_RS05900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB53_RS05900 PF00989 PAS fold EPB53_RS05910 PF04381 Putative exonuclease, RdgC EPB53_RS05915 PF01136 Peptidase family U32 EPB53_RS05915 PF16325 Peptidase family U32 C-terminal domain EPB53_RS05920 PF12838 4Fe-4S dicluster domain EPB53_RS05940 PF04542 Sigma-70 region 2 EPB53_RS05940 PF04545 Sigma-70, region 4 EPB53_RS05950 PF03502 Nucleoside-specific channel-forming protein, Tsx EPB53_RS05955 PF00149 Calcineurin-like phosphoesterase EPB53_RS05955 PF02872 5'-nucleotidase, C-terminal domain EPB53_RS05960 PF02558 Ketopantoate reductase PanE/ApbA EPB53_RS05960 PF08546 Ketopantoate reductase PanE/ApbA C terminal EPB53_RS05965 PF01965 DJ-1/PfpI family EPB53_RS05970 PF02657 Fe-S metabolism associated domain EPB53_RS05975 PF00899 ThiF family EPB53_RS05980 PF03562 MltA specific insert domain EPB53_RS05980 PF06725 3D domain EPB53_RS05990 PF00583 Acetyltransferase (GNAT) family EPB53_RS05990 PF00696 Amino acid kinase family EPB53_RS05995 PF13538 UvrD-like helicase C-terminal domain EPB53_RS06015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB53_RS06015 PF03466 LysR substrate binding domain EPB53_RS06020 PF07130 YebG protein EPB53_RS06025 PF14602 Hexapeptide repeat of succinyl-transferase EPB53_RS06025 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle EPB53_RS06030 PF00583 Acetyltransferase (GNAT) family EPB53_RS06035 PF08443 RimK-like ATP-grasp domain EPB53_RS06035 PF02080 TrkA-C domain EPB53_RS06035 PF18030 RimK PreATP-grasp domain EPB53_RS06040 PF01544 CorA-like Mg2+ transporter protein EPB53_RS06050 PF02417 Chromate transporter EPB53_RS06055 PF00072 Response regulator receiver domain EPB53_RS06065 PF03144 Elongation factor Tu domain 2 EPB53_RS06065 PF00009 Elongation factor Tu GTP binding domain EPB53_RS06065 PF03764 Elongation factor G, domain IV EPB53_RS06065 PF14492 Elongation Factor G, domain II EPB53_RS06065 PF00679 Elongation factor G C-terminus EPB53_RS06070 PF18073 Rubredoxin metal binding domain EPB53_RS06080 PF18429 Domain of unknown function (DUF5609) EPB53_RS06090 PF01048 Phosphorylase superfamily EPB53_RS06095 PF01676 Metalloenzyme superfamily EPB53_RS06100 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain EPB53_RS06100 PF00591 Glycosyl transferase family, a/b domain EPB53_RS06100 PF02885 Glycosyl transferase family, helical bundle domain EPB53_RS06105 PF01791 DeoC/LacD family aldolase EPB53_RS06110 PF07670 Nucleoside recognition EPB53_RS06110 PF07662 Na+ dependent nucleoside transporter C-terminus EPB53_RS06110 PF01773 Na+ dependent nucleoside transporter N-terminus EPB53_RS06115 PF01026 TatD related DNase EPB53_RS06125 PF03883 Peroxide stress protein YaaA EPB53_RS06130 PF01235 Sodium:alanine symporter family EPB53_RS06145 PF03167 Uracil DNA glycosylase superfamily EPB53_RS06150 PF01261 Xylose isomerase-like TIM barrel EPB53_RS06155 PF01228 Glycine radical EPB53_RS06160 PF14821 Threonine synthase N terminus EPB53_RS06160 PF00291 Pyridoxal-phosphate dependent enzyme EPB53_RS06165 PF00288 GHMP kinases N terminal domain EPB53_RS06165 PF08544 GHMP kinases C terminal EPB53_RS06170 PF03447 Homoserine dehydrogenase, NAD binding domain EPB53_RS06170 PF00696 Amino acid kinase family EPB53_RS06170 PF01842 ACT domain EPB53_RS06170 PF13840 ACT domain EPB53_RS06170 PF00742 Homoserine dehydrogenase EPB53_RS06180 PF03737 Aldolase/RraA EPB53_RS06190 PF00486 Transcriptional regulatory protein, C terminal EPB53_RS06190 PF00072 Response regulator receiver domain EPB53_RS06200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB53_RS06200 PF18415 Histidine kinase receptor ArcB trans-membrane domain EPB53_RS06200 PF00072 Response regulator receiver domain EPB53_RS06200 PF01627 Hpt domain EPB53_RS06200 PF00989 PAS fold EPB53_RS06200 PF00512 His Kinase A (phospho-acceptor) domain EPB53_RS06205 PF04055 Radical SAM superfamily EPB53_RS06205 PF16199 Radical_SAM C-terminal domain EPB53_RS06215 PF07992 Pyridine nucleotide-disulphide oxidoreductase EPB53_RS06215 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster EPB53_RS06225 PF01048 Phosphorylase superfamily EPB53_RS06240 PF03458 UPF0126 domain EPB53_RS06245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB53_RS06245 PF03466 LysR substrate binding domain EPB53_RS06250 PF01925 Sulfite exporter TauE/SafE EPB53_RS06255 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EPB53_RS06255 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain EPB53_RS06255 PF02142 MGS-like domain EPB53_RS06260 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain EPB53_RS06260 PF00117 Glutamine amidotransferase class-I EPB53_RS06265 PF05173 Dihydrodipicolinate reductase, C-terminus EPB53_RS06265 PF01113 Dihydrodipicolinate reductase, N-terminus EPB53_RS06270 PF00293 NUDIX domain EPB53_RS06275 PF02810 SEC-C motif EPB53_RS06275 PF07516 SecA Wing and Scaffold domain EPB53_RS06275 PF07517 SecA DEAD-like domain EPB53_RS06275 PF01043 SecA preprotein cross-linking domain EPB53_RS06280 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase EPB53_RS06285 PF00091 Tubulin/FtsZ family, GTPase domain EPB53_RS06285 PF12327 FtsZ family, C-terminal domain EPB53_RS06290 PF02491 SHS2 domain inserted in FTSA EPB53_RS06295 PF03799 Cell division protein FtsQ EPB53_RS06295 PF08478 POTRA domain, FtsQ-type EPB53_RS06300 PF02875 Mur ligase family, glutamate ligase domain EPB53_RS06300 PF01225 Mur ligase family, catalytic domain EPB53_RS06300 PF08245 Mur ligase middle domain EPB53_RS06305 PF04101 Glycosyltransferase family 28 C-terminal domain EPB53_RS06305 PF03033 Glycosyltransferase family 28 N-terminal domain EPB53_RS06310 PF01098 Cell cycle protein EPB53_RS06315 PF02875 Mur ligase family, glutamate ligase domain EPB53_RS06315 PF08245 Mur ligase middle domain EPB53_RS06320 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 EPB53_RS06320 PF00953 Glycosyl transferase family 4 EPB53_RS06325 PF02875 Mur ligase family, glutamate ligase domain EPB53_RS06325 PF01225 Mur ligase family, catalytic domain EPB53_RS06325 PF08245 Mur ligase middle domain EPB53_RS06330 PF08245 Mur ligase middle domain EPB53_RS06330 PF01225 Mur ligase family, catalytic domain EPB53_RS06330 PF02875 Mur ligase family, glutamate ligase domain EPB53_RS06335 PF03717 Penicillin-binding Protein dimerisation domain EPB53_RS06335 PF00905 Penicillin binding protein transpeptidase domain EPB53_RS06340 PF04999 Cell division protein FtsL EPB53_RS06345 PF01795 MraW methylase family EPB53_RS06360 PF04348 LppC putative lipoprotein EPB53_RS06365 PF02021 Uncharacterised protein family UPF0102 EPB53_RS06370 PF13580 SIS domain EPB53_RS06375 PF04972 BON domain EPB53_RS06380 PF04386 Stringent starvation protein B EPB53_RS06385 PF02798 Glutathione S-transferase, N-terminal domain EPB53_RS06385 PF00043 Glutathione S-transferase, C-terminal domain EPB53_RS06390 PF00380 Ribosomal protein S9/S16 EPB53_RS06395 PF00572 Ribosomal protein L13 EPB53_RS06400 PF03969 AFG1-like ATPase EPB53_RS06410 PF00595 PDZ domain EPB53_RS06410 PF13180 PDZ domain EPB53_RS06420 PF01245 Ribosomal protein L19 EPB53_RS06425 PF01746 tRNA (Guanine-1)-methyltransferase EPB53_RS06430 PF01782 RimM N-terminal domain EPB53_RS06430 PF05239 PRC-barrel domain EPB53_RS06435 PF00886 Ribosomal protein S16 EPB53_RS06440 PF02881 SRP54-type protein, helical bundle domain EPB53_RS06440 PF02978 Signal peptide binding domain EPB53_RS06440 PF00448 SRP54-type protein, GTPase domain EPB53_RS06445 PF01578 Cytochrome C assembly protein EPB53_RS06450 PF01595 Cyclin M transmembrane N-terminal domain EPB53_RS06450 PF03471 Transporter associated domain EPB53_RS06450 PF00571 CBS domain EPB53_RS06455 PF02664 S-Ribosylhomocysteinase (LuxS) EPB53_RS06460 PF04262 Glutamate-cysteine ligase EPB53_RS06465 PF05193 Peptidase M16 inactive domain EPB53_RS06465 PF00675 Insulinase (Peptidase family M16) EPB53_RS06470 PF09335 SNARE associated Golgi protein EPB53_RS06475 PF08240 Alcohol dehydrogenase GroES-like domain EPB53_RS06475 PF00107 Zinc-binding dehydrogenase EPB53_RS06480 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit EPB53_RS06485 PF00364 Biotin-requiring enzyme EPB53_RS06485 PF00682 HMGL-like EPB53_RS06485 PF02436 Conserved carboxylase domain EPB53_RS06490 PF04277 Oxaloacetate decarboxylase, gamma chain EPB53_RS06535 PF02599 Global regulator protein family EPB53_RS06540 PF00696 Amino acid kinase family EPB53_RS06540 PF01842 ACT domain EPB53_RS06540 PF13840 ACT domain EPB53_RS06550 PF02631 RecX family EPB53_RS06555 PF00154 recA bacterial DNA recombination protein EPB53_RS06560 PF02464 Competence-damaged protein EPB53_RS06565 PF00005 ABC transporter EPB53_RS06565 PF12857 TOBE-like domain EPB53_RS06570 PF00528 Binding-protein-dependent transport system inner membrane component EPB53_RS06575 PF00528 Binding-protein-dependent transport system inner membrane component EPB53_RS06595 PF04542 Sigma-70 region 2 EPB53_RS06595 PF04545 Sigma-70, region 4 EPB53_RS06595 PF04539 Sigma-70 region 3 EPB53_RS06595 PF00140 Sigma-70 factor, region 1.2 EPB53_RS06610 PF01975 Survival protein SurE EPB53_RS06615 PF01142 tRNA pseudouridine synthase D (TruD) EPB53_RS06620 PF02542 YgbB family EPB53_RS06625 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase EPB53_RS06630 PF04977 Septum formation initiator EPB53_RS06635 PF02673 Bacitracin resistance protein BacA EPB53_RS06640 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) EPB53_RS06645 PF02152 Dihydroneopterin aldolase EPB53_RS06650 PF02660 Glycerol-3-phosphate acyltransferase EPB53_RS06655 PF00814 Glycoprotease family EPB53_RS06660 PF01165 Ribosomal protein S21 EPB53_RS06665 PF09424 Yqey-like protein EPB53_RS06670 PF08278 DNA primase DnaG DnaB-binding EPB53_RS06670 PF08275 DNA primase catalytic core, N-terminal domain EPB53_RS06670 PF10410 DnaB-helicase binding domain of primase EPB53_RS06670 PF01807 CHC2 zinc finger EPB53_RS06675 PF04542 Sigma-70 region 2 EPB53_RS06675 PF03979 Sigma-70 factor, region 1.1 EPB53_RS06675 PF04546 Sigma-70, non-essential region EPB53_RS06675 PF04545 Sigma-70, region 4 EPB53_RS06675 PF04539 Sigma-70 region 3 EPB53_RS06675 PF00140 Sigma-70 factor, region 1.2 EPB53_RS06690 PF01810 LysE type translocator EPB53_RS06705 PF02613 Nitrate reductase delta subunit EPB53_RS06710 PF04976 DMSO reductase anchor subunit (DmsC) EPB53_RS06715 PF13247 4Fe-4S dicluster domain EPB53_RS06715 PF12800 4Fe-4S binding domain EPB53_RS06720 PF00384 Molybdopterin oxidoreductase EPB53_RS06720 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EPB53_RS06720 PF01568 Molydopterin dinucleotide binding domain EPB53_RS06725 PF12838 4Fe-4S dicluster domain EPB53_RS06725 PF00037 4Fe-4S binding domain EPB53_RS06730 PF03009 Glycerophosphoryl diester phosphodiesterase family EPB53_RS06735 PF03009 Glycerophosphoryl diester phosphodiesterase family EPB53_RS06820 PF01380 SIS domain EPB53_RS06825 PF08220 DeoR-like helix-turn-helix domain EPB53_RS06825 PF00455 DeoR C terminal sensor domain EPB53_RS06830 PF00224 Pyruvate kinase, barrel domain EPB53_RS06830 PF02887 Pyruvate kinase, alpha/beta domain EPB53_RS06835 PF00990 Diguanylate cyclase, GGDEF domain EPB53_RS06845 PF03466 LysR substrate binding domain EPB53_RS06845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB53_RS06850 PF01810 LysE type translocator EPB53_RS06855 PF00924 Mechanosensitive ion channel EPB53_RS06855 PF05552 Conserved TM helix EPB53_RS06860 PF01116 Fructose-bisphosphate aldolase class-II EPB53_RS06865 PF00162 Phosphoglycerate kinase EPB53_RS06870 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EPB53_RS06870 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EPB53_RS06875 PF00593 TonB dependent receptor EPB53_RS06875 PF07715 TonB-dependent Receptor Plug Domain EPB53_RS06880 PF03466 LysR substrate binding domain EPB53_RS06880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB53_RS06885 PF02780 Transketolase, C-terminal domain EPB53_RS06885 PF00456 Transketolase, thiamine diphosphate binding domain EPB53_RS06885 PF02779 Transketolase, pyrimidine binding domain EPB53_RS06890 PF02772 S-adenosylmethionine synthetase, central domain EPB53_RS06890 PF02773 S-adenosylmethionine synthetase, C-terminal domain EPB53_RS06890 PF00438 S-adenosylmethionine synthetase, N-terminal domain EPB53_RS06900 PF04231 Endonuclease I EPB53_RS06905 PF04452 RNA methyltransferase EPB53_RS06915 PF02622 Uncharacterized ACR, COG1678 EPB53_RS06920 PF03652 Holliday junction resolvase EPB53_RS06925 PF00437 Type II/IV secretion system protein EPB53_RS06930 PF00437 Type II/IV secretion system protein EPB53_RS06935 PF01168 Alanine racemase, N-terminal domain EPB53_RS06940 PF03807 NADP oxidoreductase coenzyme F420-dependent EPB53_RS06940 PF14748 Pyrroline-5-carboxylate reductase dimerisation EPB53_RS06945 PF02325 YGGT family EPB53_RS06950 PF02594 Uncharacterised ACR, YggU family COG1872 EPB53_RS06960 PF06969 HemN C-terminal domain EPB53_RS06960 PF04055 Radical SAM superfamily EPB53_RS06965 PF04960 Glutaminase EPB53_RS06970 PF02390 Putative methyltransferase EPB53_RS06975 PF14815 NUDIX domain EPB53_RS06975 PF00730 HhH-GPD superfamily base excision DNA repair protein EPB53_RS06975 PF00633 Helix-hairpin-helix motif EPB53_RS06975 PF10576 Iron-sulfur binding domain of endonuclease III EPB53_RS06980 PF04362 Bacterial Fe(2+) trafficking EPB53_RS06985 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain EPB53_RS06985 PF01464 Transglycosylase SLT domain EPB53_RS07035 PF00226 DnaJ domain EPB53_RS07035 PF05099 Tellurite resistance protein TerB EPB53_RS07040 PF03968 OstA-like protein EPB53_RS07040 PF04453 LPS transport system D EPB53_RS07045 PF09312 SurA N-terminal domain EPB53_RS07055 PF00398 Ribosomal RNA adenine dimethylase EPB53_RS07060 PF04379 ApaG domain EPB53_RS07065 PF00149 Calcineurin-like phosphoesterase EPB53_RS07070 PF00186 Dihydrofolate reductase EPB53_RS07075 PF12821 Threonine/Serine exporter, ThrE EPB53_RS07080 PF06738 Putative threonine/serine exporter EPB53_RS07085 PF01926 50S ribosome-binding GTPase EPB53_RS07085 PF01018 GTP1/OBG EPB53_RS07090 PF01016 Ribosomal L27 protein EPB53_RS07095 PF00829 Ribosomal prokaryotic L21 protein EPB53_RS07100 PF00348 Polyprenyl synthetase EPB53_RS07105 PF13520 Amino acid permease EPB53_RS07110 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain EPB53_RS07110 PF00056 lactate/malate dehydrogenase, NAD binding domain EPB53_RS07115 PF01316 Arginine repressor, DNA binding domain EPB53_RS07115 PF02863 Arginine repressor, C-terminal domain EPB53_RS07120 PF16868 NMT1-like family EPB53_RS07130 PF00582 Universal stress protein family EPB53_RS07145 PF06877 Regulator of ribonuclease activity B EPB53_RS07150 PF01523 Putative modulator of DNA gyrase EPB53_RS07155 PF00795 Carbon-nitrogen hydrolase EPB53_RS07160 PF13116 Protein of unknown function EPB53_RS07160 PF13502 AsmA-like C-terminal region EPB53_RS07165 PF10150 Ribonuclease E/G family EPB53_RS07165 PF00575 S1 RNA binding domain EPB53_RS07170 PF02545 Maf-like protein EPB53_RS07175 PF04093 rod shape-determining protein MreD EPB53_RS07180 PF04085 rod shape-determining protein MreC EPB53_RS07215 PF07963 Prokaryotic N-terminal methylation motif EPB53_RS07240 PF13401 AAA domain EPB53_RS07240 PF01471 Putative peptidoglycan binding domain EPB53_RS07245 PF00263 Bacterial type II and III secretion system protein EPB53_RS07245 PF03958 Bacterial type II/III secretion system short domain EPB53_RS07265 PF00990 Diguanylate cyclase, GGDEF domain EPB53_RS07265 PF17157 Gammaproteobacterial periplasmic sensor domain EPB53_RS07265 PF00563 EAL domain EPB53_RS07270 PF00436 Single-strand binding protein family EPB53_RS07275 PF00196 Bacterial regulatory proteins, luxR family EPB53_RS07280 PF00483 Nucleotidyl transferase EPB53_RS07285 PF17755 UvrA DNA-binding domain EPB53_RS07285 PF17760 UvrA interaction domain EPB53_RS07285 PF00005 ABC transporter EPB53_RS07295 PF00266 Aminotransferase class-V EPB53_RS07300 PF01842 ACT domain EPB53_RS07300 PF00696 Amino acid kinase family EPB53_RS07305 PF02310 B12 binding domain EPB53_RS07305 PF02574 Homocysteine S-methyltransferase EPB53_RS07305 PF00809 Pterin binding enzyme EPB53_RS07305 PF02607 B12 binding domain EPB53_RS07305 PF02965 Vitamin B12 dependent methionine synthase, activation domain EPB53_RS07310 PF00999 Sodium/hydrogen exchanger family EPB53_RS07350 PF01507 Phosphoadenosine phosphosulfate reductase family EPB53_RS07355 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain EPB53_RS07355 PF01077 Nitrite and sulphite reductase 4Fe-4S domain EPB53_RS07375 PF01207 Dihydrouridine synthase (Dus) EPB53_RS07390 PF03806 AbgT putative transporter family EPB53_RS07395 PF01475 Ferric uptake regulator family EPB53_RS07405 PF00342 Phosphoglucose isomerase EPB53_RS07415 PF00772 DnaB-like helicase N terminal domain EPB53_RS07415 PF03796 DnaB-like helicase C terminal domain EPB53_RS07425 PF01281 Ribosomal protein L9, N-terminal domain EPB53_RS07425 PF03948 Ribosomal protein L9, C-terminal domain EPB53_RS07430 PF01084 Ribosomal protein S18 EPB53_RS07435 PF01250 Ribosomal protein S6 EPB53_RS07440 PF03143 Elongation factor Tu C-terminal domain EPB53_RS07440 PF03144 Elongation factor Tu domain 2 EPB53_RS07440 PF00009 Elongation factor Tu GTP binding domain EPB53_RS07445 PF00679 Elongation factor G C-terminus EPB53_RS07445 PF14492 Elongation Factor G, domain II EPB53_RS07445 PF00009 Elongation factor Tu GTP binding domain EPB53_RS07445 PF03144 Elongation factor Tu domain 2 EPB53_RS07445 PF03764 Elongation factor G, domain IV EPB53_RS07450 PF00177 Ribosomal protein S7p/S5e EPB53_RS07455 PF00164 Ribosomal protein S12/S23 EPB53_RS07460 PF04077 DsrH like protein EPB53_RS07465 PF02635 DsrE/DsrF-like family EPB53_RS07470 PF02635 DsrE/DsrF-like family EPB53_RS07475 PF13309 HTH domain EPB53_RS07475 PF08348 YheO-like PAS domain EPB53_RS07480 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase EPB53_RS07480 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EPB53_RS07490 PF04102 SlyX EPB53_RS07505 PF12221 Bacterial membrane protein N terminal EPB53_RS07505 PF01145 SPFH domain / Band 7 family EPB53_RS07515 PF17209 Hfq protein EPB53_RS07525 PF01119 DNA mismatch repair protein, C-terminal domain EPB53_RS07525 PF08676 MutL C terminal dimerisation domain EPB53_RS07530 PF01520 N-acetylmuramoyl-L-alanine amidase EPB53_RS07535 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE EPB53_RS07540 PF08331 Domain of unknown function (DUF1730) EPB53_RS07590 PF00929 Exonuclease EPB53_RS07595 PF03193 RsgA GTPase EPB53_RS07600 PF02666 Phosphatidylserine decarboxylase EPB53_RS07610 PF06415 BPG-independent PGAM N-terminus (iPGM_N) EPB53_RS07610 PF01676 Metalloenzyme superfamily EPB53_RS07620 PF01551 Peptidase family M23 EPB53_RS07635 PF01208 Uroporphyrinogen decarboxylase (URO-D) EPB53_RS07640 PF09297 NADH pyrophosphatase zinc ribbon domain EPB53_RS07640 PF00293 NUDIX domain EPB53_RS07645 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ EPB53_RS07650 PF00623 RNA polymerase Rpb1, domain 2 EPB53_RS07650 PF04998 RNA polymerase Rpb1, domain 5 EPB53_RS07650 PF05000 RNA polymerase Rpb1, domain 4 EPB53_RS07650 PF04983 RNA polymerase Rpb1, domain 3 EPB53_RS07650 PF04997 RNA polymerase Rpb1, domain 1 EPB53_RS07655 PF10385 RNA polymerase beta subunit external 1 domain EPB53_RS07655 PF00562 RNA polymerase Rpb2, domain 6 EPB53_RS07655 PF04561 RNA polymerase Rpb2, domain 2 EPB53_RS07655 PF04563 RNA polymerase beta subunit EPB53_RS07655 PF04560 RNA polymerase Rpb2, domain 7 EPB53_RS07655 PF04565 RNA polymerase Rpb2, domain 3 EPB53_RS07660 PF00542 Ribosomal protein L7/L12 C-terminal domain EPB53_RS07660 PF16320 Ribosomal protein L7/L12 dimerisation domain EPB53_RS07665 PF00466 Ribosomal protein L10 EPB53_RS07670 PF00687 Ribosomal protein L1p/L10e family EPB53_RS07675 PF03946 Ribosomal protein L11, N-terminal domain EPB53_RS07675 PF00298 Ribosomal protein L11, RNA binding domain EPB53_RS07680 PF02357 Transcription termination factor nusG EPB53_RS07680 PF00467 KOW motif EPB53_RS07685 PF00584 SecE/Sec61-gamma subunits of protein translocation complex EPB53_RS07690 PF03143 Elongation factor Tu C-terminal domain EPB53_RS07690 PF03144 Elongation factor Tu domain 2 EPB53_RS07690 PF00009 Elongation factor Tu GTP binding domain EPB53_RS07715 PF00485 Phosphoribulokinase / Uridine kinase family EPB53_RS07725 PF01565 FAD binding domain EPB53_RS07725 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain EPB53_RS07735 PF13091 PLD-like domain EPB53_RS07775 PF00175 Oxidoreductase NAD-binding domain EPB53_RS07785 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EPB53_RS07785 PF07498 Rho termination factor, N-terminal domain EPB53_RS07785 PF07497 Rho termination factor, RNA-binding domain EPB53_RS07790 PF00085 Thioredoxin EPB53_RS07795 PF00271 Helicase conserved C-terminal domain EPB53_RS07795 PF00270 DEAD/DEAH box helicase EPB53_RS07800 PF02541 Ppx/GppA phosphatase family EPB53_RS07810 PF12832 MFS_1 like family EPB53_RS07825 PF00501 AMP-binding enzyme EPB53_RS07825 PF13193 AMP-binding enzyme C-terminal domain EPB53_RS07825 PF16177 Acetyl-coenzyme A synthetase N-terminus EPB53_RS07830 PF01220 Dehydroquinase class II EPB53_RS07835 PF00364 Biotin-requiring enzyme EPB53_RS07840 PF00289 Biotin carboxylase, N-terminal domain EPB53_RS07840 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EPB53_RS07840 PF02785 Biotin carboxylase C-terminal domain EPB53_RS07850 PF01207 Dihydrouridine synthase (Dus) EPB53_RS07855 PF02954 Bacterial regulatory protein, Fis family EPB53_RS07860 PF03466 LysR substrate binding domain EPB53_RS07860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB53_RS07865 PF07715 TonB-dependent Receptor Plug Domain EPB53_RS07865 PF00593 TonB dependent receptor EPB53_RS07870 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EPB53_RS07880 PF12833 Helix-turn-helix domain EPB53_RS07885 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EPB53_RS07885 PF02378 Phosphotransferase system, EIIC EPB53_RS07885 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EPB53_RS07895 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain EPB53_RS07895 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain EPB53_RS07895 PF01276 Orn/Lys/Arg decarboxylase, major domain EPB53_RS07900 PF13520 Amino acid permease EPB53_RS07905 PF08543 Phosphomethylpyrimidine kinase EPB53_RS07910 PF18500 CadC C-terminal domain 1 EPB53_RS07910 PF00486 Transcriptional regulatory protein, C terminal EPB53_RS07915 PF13411 MerR HTH family regulatory protein EPB53_RS07925 PF01808 AICARFT/IMPCHase bienzyme EPB53_RS07925 PF02142 MGS-like domain EPB53_RS07930 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain EPB53_RS07930 PF02843 Phosphoribosylglycinamide synthetase, C domain EPB53_RS07930 PF02844 Phosphoribosylglycinamide synthetase, N domain EPB53_RS07940 PF00216 Bacterial DNA-binding protein EPB53_RS07945 PF01595 Cyclin M transmembrane N-terminal domain EPB53_RS07945 PF00571 CBS domain EPB53_RS07950 PF00924 Mechanosensitive ion channel EPB53_RS07955 PF04222 Protein of unknown function (DUF416) EPB53_RS07960 PF00672 HAMP domain EPB53_RS07960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB53_RS07965 PF08402 TOBE domain EPB53_RS07965 PF00005 ABC transporter EPB53_RS07970 PF00528 Binding-protein-dependent transport system inner membrane component EPB53_RS07975 PF00528 Binding-protein-dependent transport system inner membrane component EPB53_RS07985 PF07690 Major Facilitator Superfamily EPB53_RS07995 PF00196 Bacterial regulatory proteins, luxR family EPB53_RS07995 PF00072 Response regulator receiver domain EPB53_RS08000 PF07690 Major Facilitator Superfamily EPB53_RS08005 PF00072 Response regulator receiver domain EPB53_RS08005 PF00196 Bacterial regulatory proteins, luxR family EPB53_RS08010 PF05231 MASE1 EPB53_RS08010 PF07730 Histidine kinase EPB53_RS08010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB53_RS08015 PF07690 Major Facilitator Superfamily EPB53_RS08030 PF00753 Metallo-beta-lactamase superfamily EPB53_RS08030 PF10996 Beta-Casp domain EPB53_RS08030 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain EPB53_RS08045 PF16363 GDP-mannose 4,6 dehydratase EPB53_RS08060 PF00483 Nucleotidyl transferase EPB53_RS08065 PF01370 NAD dependent epimerase/dehydratase family EPB53_RS08075 PF01238 Phosphomannose isomerase type I EPB53_RS08080 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EPB53_RS08080 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EPB53_RS08080 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EPB53_RS08080 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EPB53_RS08085 PF00535 Glycosyl transferase family 2 EPB53_RS08090 PF01050 Mannose-6-phosphate isomerase EPB53_RS08090 PF00483 Nucleotidyl transferase EPB53_RS08095 PF00293 NUDIX domain EPB53_RS08100 PF01370 NAD dependent epimerase/dehydratase family EPB53_RS08105 PF16363 GDP-mannose 4,6 dehydratase EPB53_RS08125 PF00132 Bacterial transferase hexapeptide (six repeats) EPB53_RS08130 PF00535 Glycosyl transferase family 2 EPB53_RS08130 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase EPB53_RS08140 PF00132 Bacterial transferase hexapeptide (six repeats) EPB53_RS08150 PF08666 SAF domain EPB53_RS08150 PF03102 NeuB family EPB53_RS08165 PF02348 Cytidylyltransferase EPB53_RS08170 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EPB53_RS08175 PF02719 Polysaccharide biosynthesis protein EPB53_RS08195 PF13808 DDE_Tnp_1-associated EPB53_RS08195 PF01609 Transposase DDE domain EPB53_RS08215 PF06082 Exopolysaccharide biosynthesis protein YbjH EPB53_RS08225 PF01370 NAD dependent epimerase/dehydratase family EPB53_RS08230 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EPB53_RS08230 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EPB53_RS08230 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EPB53_RS08245 PF01075 Glycosyltransferase family 9 (heptosyltransferase) EPB53_RS08250 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) EPB53_RS08250 PF00534 Glycosyl transferases group 1 EPB53_RS08260 PF01219 Prokaryotic diacylglycerol kinase EPB53_RS08265 PF01075 Glycosyltransferase family 9 (heptosyltransferase) EPB53_RS08270 PF00535 Glycosyl transferase family 2 EPB53_RS08275 PF00535 Glycosyl transferase family 2 EPB53_RS08280 PF13439 Glycosyltransferase Family 4 EPB53_RS08280 PF00534 Glycosyl transferases group 1 EPB53_RS08285 PF01467 Cytidylyltransferase-like EPB53_RS08295 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain EPB53_RS08295 PF06827 Zinc finger found in FPG and IleRS EPB53_RS08295 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain EPB53_RS08305 PF00471 Ribosomal protein L33 EPB53_RS08310 PF00830 Ribosomal L28 family EPB53_RS08315 PF04002 RadC-like JAB domain EPB53_RS08325 PF00440 Bacterial regulatory proteins, tetR family EPB53_RS08335 PF06580 Histidine kinase EPB53_RS08335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB53_RS08335 PF07694 5TMR of 5TMR-LYT EPB53_RS08345 PF07690 Major Facilitator Superfamily EPB53_RS08350 PF00156 Phosphoribosyl transferase domain EPB53_RS08355 PF01138 3' exoribonuclease family, domain 1 EPB53_RS08355 PF03725 3' exoribonuclease family, domain 2 EPB53_RS08360 PF03755 YicC-like family, N-terminal region EPB53_RS08360 PF08340 Domain of unknown function (DUF1732) EPB53_RS08390 PF00419 Fimbrial protein EPB53_RS08400 PF02753 Pili assembly chaperone PapD, C-terminal domain EPB53_RS08400 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain EPB53_RS08405 PF13954 PapC N-terminal domain EPB53_RS08405 PF00577 Outer membrane usher protein EPB53_RS08405 PF13953 PapC C-terminal domain EPB53_RS08410 PF13954 PapC N-terminal domain EPB53_RS08410 PF13953 PapC C-terminal domain EPB53_RS08410 PF00577 Outer membrane usher protein EPB53_RS08415 PF00577 Outer membrane usher protein EPB53_RS08415 PF13954 PapC N-terminal domain EPB53_RS08415 PF13953 PapC C-terminal domain EPB53_RS08420 PF13954 PapC N-terminal domain EPB53_RS08420 PF00577 Outer membrane usher protein EPB53_RS08420 PF13953 PapC C-terminal domain EPB53_RS08425 PF00419 Fimbrial protein EPB53_RS08450 PF02810 SEC-C motif EPB53_RS08475 PF04632 Fusaric acid resistance protein family EPB53_RS08480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EPB53_RS08480 PF00529 HlyD membrane-fusion protein of T1SS EPB53_RS08490 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family EPB53_RS08500 PF13808 DDE_Tnp_1-associated EPB53_RS08500 PF01609 Transposase DDE domain EPB53_RS08505 PF00675 Insulinase (Peptidase family M16) EPB53_RS08505 PF05193 Peptidase M16 inactive domain EPB53_RS08510 PF01979 Amidohydrolase family EPB53_RS08515 PF03350 Uncharacterized protein family, UPF0114 EPB53_RS08525 PF01380 SIS domain EPB53_RS08530 PF01418 Helix-turn-helix domain, rpiR family EPB53_RS08530 PF01380 SIS domain EPB53_RS08540 PF00271 Helicase conserved C-terminal domain EPB53_RS08540 PF00270 DEAD/DEAH box helicase EPB53_RS08540 PF00570 HRDC domain EPB53_RS08540 PF16124 RecQ zinc-binding EPB53_RS08540 PF09382 RQC domain EPB53_RS08545 PF00892 EamA-like transporter family EPB53_RS08550 PF01810 LysE type translocator EPB53_RS08555 PF13361 UvrD-like helicase C-terminal domain EPB53_RS08555 PF00580 UvrD/REP helicase N-terminal domain EPB53_RS08560 PF01432 Peptidase family M3 EPB53_RS08565 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ EPB53_RS08570 PF07992 Pyridine nucleotide-disulphide oxidoreductase EPB53_RS08570 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EPB53_RS08600 PF13358 DDE superfamily endonuclease EPB53_RS08615 PF14319 Transposase zinc-binding domain EPB53_RS08615 PF04986 Putative transposase EPB53_RS08630 PF13358 DDE superfamily endonuclease EPB53_RS08665 PF03793 PASTA domain EPB53_RS08665 PF00069 Protein kinase domain EPB53_RS08700 PF12911 N-terminal TM domain of oligopeptide transport permease C EPB53_RS08700 PF00528 Binding-protein-dependent transport system inner membrane component EPB53_RS08705 PF00528 Binding-protein-dependent transport system inner membrane component EPB53_RS08710 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EPB53_RS08715 PF00005 ABC transporter EPB53_RS08715 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EPB53_RS08745 PF00580 UvrD/REP helicase N-terminal domain EPB53_RS08745 PF13361 UvrD-like helicase C-terminal domain EPB53_RS08750 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EPB53_RS08755 PF00873 AcrB/AcrD/AcrF family EPB53_RS08760 PF04380 Membrane fusogenic activity EPB53_RS08770 PF03466 LysR substrate binding domain EPB53_RS08770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB53_RS08800 PF00132 Bacterial transferase hexapeptide (six repeats) EPB53_RS08805 PF07369 Protein of unknown function (DUF1488) EPB53_RS08815 PF01218 Coproporphyrinogen III oxidase EPB53_RS08820 PF01300 Telomere recombination EPB53_RS08825 PF00731 AIR carboxylase EPB53_RS08830 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain EPB53_RS08830 PF02222 ATP-grasp domain EPB53_RS08835 PF00155 Aminotransferase class I and II EPB53_RS08840 PF05746 DALR anticodon binding domain EPB53_RS08840 PF02092 Glycyl-tRNA synthetase beta subunit EPB53_RS08845 PF02091 Glycyl-tRNA synthetase alpha subunit EPB53_RS08850 PF01169 Uncharacterized protein family UPF0016 EPB53_RS08860 PF01206 Sulfurtransferase TusA EPB53_RS08865 PF00107 Zinc-binding dehydrogenase EPB53_RS08865 PF08240 Alcohol dehydrogenase GroES-like domain EPB53_RS08870 PF00585 C-terminal regulatory domain of Threonine dehydratase EPB53_RS08870 PF00291 Pyridoxal-phosphate dependent enzyme EPB53_RS08875 PF00920 Dehydratase family EPB53_RS08880 PF01063 Amino-transferase class IV EPB53_RS08890 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EPB53_RS08890 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EPB53_RS08890 PF00205 Thiamine pyrophosphate enzyme, central domain EPB53_RS08895 PF13335 Magnesium chelatase, subunit ChlI C-terminal EPB53_RS08895 PF01078 Magnesium chelatase, subunit ChlI EPB53_RS08900 PF01323 DSBA-like thioredoxin domain EPB53_RS08905 PF01636 Phosphotransferase enzyme family EPB53_RS08910 PF06288 Protein of unknown function (DUF1040) EPB53_RS08920 PF03006 Haemolysin-III related EPB53_RS08930 PF02254 TrkA-N domain EPB53_RS08930 PF02080 TrkA-C domain EPB53_RS08935 PF01029 NusB family EPB53_RS08935 PF01189 16S rRNA methyltransferase RsmB/F EPB53_RS08945 PF01327 Polypeptide deformylase EPB53_RS08965 PF04361 Protein of unknown function (DUF494) EPB53_RS08975 PF00258 Flavodoxin EPB53_RS08980 PF00486 Transcriptional regulatory protein, C terminal EPB53_RS08980 PF00072 Response regulator receiver domain EPB53_RS08985 PF00072 Response regulator receiver domain EPB53_RS08985 PF00990 Diguanylate cyclase, GGDEF domain EPB53_RS08990 PF00512 His Kinase A (phospho-acceptor) domain EPB53_RS08990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB53_RS08990 PF00672 HAMP domain EPB53_RS08990 PF13426 PAS domain EPB53_RS09000 PF01926 50S ribosome-binding GTPase EPB53_RS09000 PF10396 GTP-binding protein TrmE N-terminus EPB53_RS09000 PF12631 MnmE helical domain EPB53_RS09005 PF02096 60Kd inner membrane protein EPB53_RS09005 PF14849 YidC periplasmic domain EPB53_RS09015 PF00825 Ribonuclease P EPB53_RS09020 PF00468 Ribosomal protein L34 EPB53_RS09025 PF11638 DnaA N-terminal domain EPB53_RS09025 PF08299 Bacterial dnaA protein helix-turn-helix EPB53_RS09025 PF00308 Bacterial dnaA protein EPB53_RS09030 PF00712 DNA polymerase III beta subunit, N-terminal domain EPB53_RS09030 PF02767 DNA polymerase III beta subunit, central domain EPB53_RS09030 PF02768 DNA polymerase III beta subunit, C-terminal domain EPB53_RS09035 PF02463 RecF/RecN/SMC N terminal domain EPB53_RS09040 PF00204 DNA gyrase B EPB53_RS09040 PF01751 Toprim domain EPB53_RS09040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB53_RS09040 PF18053 DNA gyrase B subunit insert domain EPB53_RS09040 PF00986 DNA gyrase B subunit, carboxyl terminus EPB53_RS09055 PF00011 Hsp20/alpha crystallin family EPB53_RS09060 PF13932 GidA associated domain EPB53_RS09060 PF01134 Glucose inhibited division protein A EPB53_RS09065 PF02527 rRNA small subunit methyltransferase G EPB53_RS09070 PF13614 AAA domain EPB53_RS09075 PF02195 ParB-like nuclease domain EPB53_RS09075 PF17762 HTH domain found in ParB protein EPB53_RS09080 PF03899 ATP synthase I chain EPB53_RS09085 PF00119 ATP synthase A chain EPB53_RS09090 PF00137 ATP synthase subunit C EPB53_RS09095 PF00430 ATP synthase B/B' CF(0) EPB53_RS09100 PF00213 ATP synthase delta (OSCP) subunit EPB53_RS09105 PF00306 ATP synthase alpha/beta chain, C terminal domain EPB53_RS09105 PF02874 ATP synthase alpha/beta family, beta-barrel domain EPB53_RS09105 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EPB53_RS09110 PF00231 ATP synthase EPB53_RS09115 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EPB53_RS09115 PF02874 ATP synthase alpha/beta family, beta-barrel domain EPB53_RS09120 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain EPB53_RS09120 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain EPB53_RS09125 PF12804 MobA-like NTP transferase domain EPB53_RS09125 PF14602 Hexapeptide repeat of succinyl-transferase EPB53_RS09125 PF00132 Bacterial transferase hexapeptide (six repeats) EPB53_RS09130 PF07690 Major Facilitator Superfamily EPB53_RS09135 PF03466 LysR substrate binding domain EPB53_RS09135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB53_RS09140 PF00108 Thiolase, N-terminal domain EPB53_RS09140 PF02803 Thiolase, C-terminal domain EPB53_RS09145 PF00378 Enoyl-CoA hydratase/isomerase EPB53_RS09145 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EPB53_RS09145 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EPB53_RS09150 PF01205 Uncharacterized protein family UPF0029 EPB53_RS09150 PF09186 Domain of unknown function (DUF1949) EPB53_RS09155 PF02386 Cation transport protein EPB53_RS09160 PF12724 Flavodoxin domain EPB53_RS09225 PF00654 Voltage gated chloride channel EPB53_RS09230 PF13667 ThiC-associated domain EPB53_RS09230 PF01964 Radical SAM ThiC family EPB53_RS09235 PF02581 Thiamine monophosphate synthase EPB53_RS09240 PF00899 ThiF family EPB53_RS09250 PF05690 Thiazole biosynthesis protein ThiG EPB53_RS09255 PF06968 Biotin and Thiamin Synthesis associated domain EPB53_RS09255 PF04055 Radical SAM superfamily EPB53_RS09260 PF00571 CBS domain EPB53_RS09260 PF00005 ABC transporter EPB53_RS09265 PF00528 Binding-protein-dependent transport system inner membrane component EPB53_RS09270 PF04069 Substrate binding domain of ABC-type glycine betaine transport system EPB53_RS09275 PF05199 GMC oxidoreductase EPB53_RS09275 PF00732 GMC oxidoreductase EPB53_RS09280 PF00171 Aldehyde dehydrogenase family EPB53_RS09285 PF00440 Bacterial regulatory proteins, tetR family EPB53_RS09285 PF13977 BetI-type transcriptional repressor, C-terminal EPB53_RS09290 PF00557 Metallopeptidase family M24 EPB53_RS09290 PF01321 Creatinase/Prolidase N-terminal domain EPB53_RS09290 PF01321 Creatinase/Prolidase N-terminal domain EPB53_RS09290 PF00557 Metallopeptidase family M24 EPB53_RS09295 PF03466 LysR substrate binding domain EPB53_RS09295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB53_RS09300 PF07690 Major Facilitator Superfamily EPB53_RS09310 PF01037 Lrp/AsnC ligand binding domain EPB53_RS09315 PF04445 Putative SAM-dependent methyltransferase EPB53_RS09325 PF00892 EamA-like transporter family EPB53_RS09330 PF00582 Universal stress protein family EPB53_RS09335 PF00210 Ferritin-like domain EPB53_RS09340 PF10625 Universal stress protein B (UspB) EPB53_RS09355 PF02646 RmuC family EPB53_RS09360 PF01209 ubiE/COQ5 methyltransferase family EPB53_RS09365 PF02036 SCP-2 sterol transfer family EPB53_RS09370 PF03109 ABC1 family EPB53_RS09375 PF02416 mttA/Hcf106 family EPB53_RS09380 PF02416 mttA/Hcf106 family EPB53_RS09385 PF00902 Sec-independent protein translocase protein (TatC) EPB53_RS09390 PF01026 TatD related DNase EPB53_RS09395 PF00490 Delta-aminolevulinic acid dehydratase EPB53_RS09400 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EPB53_RS09400 PF00476 DNA polymerase family A EPB53_RS09400 PF01367 5'-3' exonuclease, C-terminal SAM fold EPB53_RS09400 PF01612 3'-5' exonuclease EPB53_RS09405 PF01926 50S ribosome-binding GTPase EPB53_RS09415 PF04220 Der GTPase activator (YihI) EPB53_RS09420 PF10675 Protein of unknown function (DUF2489) EPB53_RS09425 PF04055 Radical SAM superfamily EPB53_RS09425 PF06969 HemN C-terminal domain EPB53_RS09435 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase EPB53_RS09440 PF02602 Uroporphyrinogen-III synthase HemD EPB53_RS09445 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain EPB53_RS09445 PF03900 Porphobilinogen deaminase, C-terminal domain EPB53_RS09450 PF01295 Adenylate cyclase, class-I EPB53_RS09450 PF12633 Adenylate cyclase NT domain EPB53_RS09460 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EPB53_RS09460 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EPB53_RS09465 PF01678 Diaminopimelate epimerase EPB53_RS09470 PF04340 Protein of unknown function, DUF484 EPB53_RS09475 PF02899 Phage integrase, N-terminal SAM-like domain EPB53_RS09475 PF00589 Phage integrase family EPB53_RS09480 PF13419 Haloacid dehalogenase-like hydrolase EPB53_RS09485 PF00990 Diguanylate cyclase, GGDEF domain EPB53_RS09485 PF10442 FIST C domain EPB53_RS09485 PF08495 FIST N domain EPB53_RS09485 PF00563 EAL domain EPB53_RS09490 PF03942 DTW domain EPB53_RS09515 PF00210 Ferritin-like domain EPB53_RS09545 PF01914 MarC family integral membrane protein EPB53_RS09555 PF00448 SRP54-type protein, GTPase domain EPB53_RS09555 PF02881 SRP54-type protein, helical bundle domain EPB53_RS09560 PF00005 ABC transporter EPB53_RS09565 PF18075 FtsX extracellular domain EPB53_RS09570 PF00140 Sigma-70 factor, region 1.2 EPB53_RS09570 PF04542 Sigma-70 region 2 EPB53_RS09570 PF04545 Sigma-70, region 4 EPB53_RS09575 PF00581 Rhodanese-like domain EPB53_RS09580 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease EPB53_RS09580 PF01694 Rhomboid family EPB53_RS09590 PF04345 Chorismate lyase EPB53_RS09595 PF01040 UbiA prenyltransferase family EPB53_RS09600 PF01553 Acyltransferase EPB53_RS09605 PF01726 LexA DNA binding domain EPB53_RS09605 PF00717 Peptidase S24-like EPB53_RS09615 PF01554 MatE EPB53_RS09620 PF07992 Pyridine nucleotide-disulphide oxidoreductase EPB53_RS09620 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EPB53_RS09625 PF00440 Bacterial regulatory proteins, tetR family EPB53_RS09665 PF00075 RNase H EPB53_RS09675 PF01320 Colicin immunity protein / pyocin immunity protein EPB53_RS09730 PF04002 RadC-like JAB domain EPB53_RS09745 PF00145 C-5 cytosine-specific DNA methylase EPB53_RS09750 PF00145 C-5 cytosine-specific DNA methylase EPB53_RS09755 PF00145 C-5 cytosine-specific DNA methylase EPB53_RS09760 PF05958 tRNA (Uracil-5-)-methyltransferase EPB53_RS09765 PF07715 TonB-dependent Receptor Plug Domain EPB53_RS09765 PF00593 TonB dependent receptor EPB53_RS09770 PF01177 Asp/Glu/Hydantoin racemase EPB53_RS09825 PF00962 Adenosine/AMP deaminase EPB53_RS09830 PF00072 Response regulator receiver domain EPB53_RS09830 PF00158 Sigma-54 interaction domain EPB53_RS09830 PF02954 Bacterial regulatory protein, Fis family EPB53_RS09835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB53_RS09835 PF00512 His Kinase A (phospho-acceptor) domain EPB53_RS09835 PF00989 PAS fold EPB53_RS09845 PF00120 Glutamine synthetase, catalytic domain EPB53_RS09845 PF03951 Glutamine synthetase, beta-Grasp domain EPB53_RS09850 PF03144 Elongation factor Tu domain 2 EPB53_RS09850 PF00009 Elongation factor Tu GTP binding domain EPB53_RS09850 PF00679 Elongation factor G C-terminus EPB53_RS09855 PF03631 Virulence factor BrkB EPB53_RS09860 PF02580 D-Tyr-tRNA(Tyr) deacylase EPB53_RS09865 PF00583 Acetyltransferase (GNAT) family EPB53_RS09865 PF09500 Putative thioesterase (yiiD_Cterm) EPB53_RS09875 PF01293 Phosphoenolpyruvate carboxykinase EPB53_RS09880 PF01430 Hsp33 protein EPB53_RS09885 PF01479 S4 domain EPB53_RS09890 PF11356 Type II secretion system protein C EPB53_RS09895 PF00263 Bacterial type II and III secretion system protein EPB53_RS09895 PF03958 Bacterial type II/III secretion system short domain EPB53_RS09900 PF00437 Type II/IV secretion system protein EPB53_RS09905 PF00482 Type II secretion system (T2SS), protein F EPB53_RS09910 PF08334 Type II secretion system (T2SS), protein G EPB53_RS09910 PF07963 Prokaryotic N-terminal methylation motif EPB53_RS09915 PF12019 Type II transport protein GspH EPB53_RS09920 PF07963 Prokaryotic N-terminal methylation motif EPB53_RS09920 PF02501 Type II secretion system (T2SS), protein I EPB53_RS09925 PF07963 Prokaryotic N-terminal methylation motif EPB53_RS09925 PF11612 Type II secretion system (T2SS), protein J EPB53_RS09930 PF03934 Type II secretion system (T2SS), protein K EPB53_RS09935 PF12693 GspL periplasmic domain EPB53_RS09935 PF05134 Type II secretion system (T2SS), protein L EPB53_RS09940 PF04612 Type II secretion system (T2SS), protein M EPB53_RS09945 PF01203 Type II secretion system (T2SS), protein N EPB53_RS09950 PF00459 Inositol monophosphatase family EPB53_RS09955 PF00293 NUDIX domain EPB53_RS09960 PF01106 NifU-like domain EPB53_RS09960 PF01521 Iron-sulphur cluster biosynthesis EPB53_RS09970 PF00561 alpha/beta hydrolase fold EPB53_RS09980 PF16921 Tex protein YqgF-like domain EPB53_RS09980 PF00575 S1 RNA binding domain EPB53_RS09980 PF09371 Tex-like protein N-terminal domain EPB53_RS09980 PF17674 HHH domain EPB53_RS09990 PF01272 Transcription elongation factor, GreA/GreB, C-term EPB53_RS09990 PF03449 Transcription elongation factor, N-terminal EPB53_RS09995 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family EPB53_RS09995 PF00356 Bacterial regulatory proteins, lacI family EPB53_RS10000 PF00920 Dehydratase family EPB53_RS10005 PF01202 Shikimate kinase EPB53_RS10010 PF02447 GntP family permease EPB53_RS10020 PF00486 Transcriptional regulatory protein, C terminal EPB53_RS10020 PF00072 Response regulator receiver domain EPB53_RS10025 PF00512 His Kinase A (phospho-acceptor) domain EPB53_RS10025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB53_RS10025 PF00672 HAMP domain EPB53_RS10030 PF00860 Permease family EPB53_RS10035 PF00270 DEAD/DEAH box helicase EPB53_RS10035 PF17191 RecG wedge domain EPB53_RS10035 PF00271 Helicase conserved C-terminal domain EPB53_RS10040 PF00588 SpoU rRNA Methylase family EPB53_RS10040 PF12105 SpoU, rRNA methylase, C-terminal EPB53_RS10045 PF13291 ACT domain EPB53_RS10045 PF04607 Region found in RelA / SpoT proteins EPB53_RS10045 PF02824 TGS domain EPB53_RS10050 PF01192 RNA polymerase Rpb6 EPB53_RS10055 PF00625 Guanylate kinase EPB53_RS10060 PF02592 Putative vitamin uptake transporter EPB53_RS10070 PF00474 Sodium:solute symporter family EPB53_RS10080 PF00999 Sodium/hydrogen exchanger family EPB53_RS10080 PF03471 Transporter associated domain EPB53_RS10080 PF02080 TrkA-C domain EPB53_RS10085 PF00072 Response regulator receiver domain EPB53_RS10085 PF00196 Bacterial regulatory proteins, luxR family EPB53_RS10095 PF11412 Disulphide bond corrector protein DsbC EPB53_RS10095 PF02683 Cytochrome C biogenesis protein transmembrane region EPB53_RS10100 PF01316 Arginine repressor, DNA binding domain EPB53_RS10100 PF02863 Arginine repressor, C-terminal domain EPB53_RS10105 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EPB53_RS10105 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EPB53_RS10110 PF00696 Amino acid kinase family EPB53_RS10120 PF03606 C4-dicarboxylate anaerobic carrier EPB53_RS10125 PF03605 Anaerobic c4-dicarboxylate membrane transporter EPB53_RS10130 PF00206 Lyase EPB53_RS10130 PF10415 Fumarase C C-terminus EPB53_RS10135 PF04186 FxsA cytoplasmic membrane protein EPB53_RS10140 PF00313 'Cold-shock' DNA-binding domain EPB53_RS10150 PF00672 HAMP domain EPB53_RS10150 PF16527 Two-component sensor protein CpxA, periplasmic domain EPB53_RS10150 PF00512 His Kinase A (phospho-acceptor) domain EPB53_RS10150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB53_RS10155 PF00486 Transcriptional regulatory protein, C terminal EPB53_RS10155 PF00072 Response regulator receiver domain EPB53_RS10165 PF16916 Dimerisation domain of Zinc Transporter EPB53_RS10165 PF01545 Cation efflux family EPB53_RS10170 PF00365 Phosphofructokinase EPB53_RS10175 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded EPB53_RS10180 PF06005 Cell division protein ZapB EPB53_RS10185 PF02219 Methylenetetrahydrofolate reductase EPB53_RS10195 PF01053 Cys/Met metabolism PLP-dependent enzyme EPB53_RS10200 PF01340 Met Apo-repressor, MetJ EPB53_RS10205 PF00390 Malic enzyme, N-terminal domain EPB53_RS10205 PF03949 Malic enzyme, NAD binding domain EPB53_RS10210 PF01197 Ribosomal protein L31 EPB53_RS10215 PF18074 Primosomal protein N C-terminal domain EPB53_RS10215 PF18319 PriA DNA helicase Cys-rich region (CRR) domain EPB53_RS10215 PF00270 DEAD/DEAH box helicase EPB53_RS10215 PF17764 3′ DNA-binding domain (3′BD) EPB53_RS10215 PF00271 Helicase conserved C-terminal domain EPB53_RS10230 PF00227 Proteasome subunit EPB53_RS10235 PF00004 ATPase family associated with various cellular activities (AAA) EPB53_RS10235 PF10431 C-terminal, D2-small domain, of ClpB protein EPB53_RS10235 PF07724 AAA domain (Cdc48 subfamily) EPB53_RS10240 PF01040 UbiA prenyltransferase family EPB53_RS10245 PF03737 Aldolase/RraA EPB53_RS10250 PF01554 MatE EPB53_RS10255 PF00121 Triosephosphate isomerase EPB53_RS10280 PF00166 Chaperonin 10 Kd subunit EPB53_RS10285 PF00118 TCP-1/cpn60 chaperonin family EPB53_RS10295 PF02308 MgtC family EPB53_RS10300 PF04055 Radical SAM superfamily EPB53_RS10305 PF09285 Elongation factor P, C-terminal EPB53_RS10305 PF08207 Elongation factor P (EF-P) KOW-like domain EPB53_RS10305 PF01132 Elongation factor P (EF-P) OB domain EPB53_RS10310 PF02313 Fumarate reductase subunit D EPB53_RS10315 PF02300 Fumarate reductase subunit C EPB53_RS10320 PF13183 4Fe-4S dicluster domain EPB53_RS10320 PF13085 2Fe-2S iron-sulfur cluster binding domain EPB53_RS10325 PF00890 FAD binding domain EPB53_RS10325 PF02910 Fumarate reductase flavoprotein C-term EPB53_RS10330 PF00152 tRNA synthetases class II (D, K and N) EPB53_RS10335 PF00581 Rhodanese-like domain EPB53_RS10340 PF02556 Preprotein translocase subunit SecB EPB53_RS10350 PF06426 Serine acetyltransferase, N-terminal EPB53_RS10350 PF00132 Bacterial transferase hexapeptide (six repeats) EPB53_RS10365 PF01546 Peptidase family M20/M25/M40 EPB53_RS10365 PF07687 Peptidase dimerisation domain EPB53_RS10370 PF01118 Semialdehyde dehydrogenase, NAD binding domain EPB53_RS10370 PF02774 Semialdehyde dehydrogenase, dimerisation domain EPB53_RS10375 PF00696 Amino acid kinase family EPB53_RS10380 PF00764 Arginosuccinate synthase EPB53_RS10385 PF14698 Argininosuccinate lyase C-terminal EPB53_RS10385 PF00206 Lyase EPB53_RS10385 PF00583 Acetyltransferase (GNAT) family EPB53_RS10400 PF00905 Penicillin binding protein transpeptidase domain EPB53_RS10400 PF00912 Transglycosylase EPB53_RS10400 PF17092 Penicillin-binding protein OB-like domain EPB53_RS10425 PF11741 AMIN domain EPB53_RS10425 PF00263 Bacterial type II and III secretion system protein EPB53_RS10425 PF07660 Secretin and TonB N terminus short domain EPB53_RS10425 PF03958 Bacterial type II/III secretion system short domain EPB53_RS10430 PF01202 Shikimate kinase EPB53_RS10445 PF02086 D12 class N6 adenine-specific DNA methyltransferase EPB53_RS10455 PF13419 Haloacid dehalogenase-like hydrolase EPB53_RS10460 PF00579 tRNA synthetases class I (W and Y) EPB53_RS10470 PF00117 Glutamine amidotransferase class-I EPB53_RS10475 PF00202 Aminotransferase class-III EPB53_RS10485 PF00171 Aldehyde dehydrogenase family EPB53_RS10495 PF13545 Crp-like helix-turn-helix domain EPB53_RS10495 PF00027 Cyclic nucleotide-binding domain EPB53_RS10500 PF00485 Phosphoribulokinase / Uridine kinase family EPB53_RS10505 PF06794 Uncharacterised protein family (UPF0270) EPB53_RS10510 PF00561 alpha/beta hydrolase fold EPB53_RS10520 PF00005 ABC transporter EPB53_RS10520 PF12848 ABC transporter EPB53_RS10525 PF02525 Flavodoxin-like fold EPB53_RS10530 PF02254 TrkA-N domain EPB53_RS10530 PF00999 Sodium/hydrogen exchanger family EPB53_RS10540 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EPB53_RS10545 PF01112 Asparaginase EPB53_RS10550 PF00709 Adenylosuccinate synthetase EPB53_RS10555 PF08238 Sel1 repeat EPB53_RS10560 PF17876 Cold shock domain EPB53_RS10560 PF08461 Ribonuclease R winged-helix domain EPB53_RS10560 PF08206 Ribonuclease B OB domain EPB53_RS10560 PF00773 RNB domain EPB53_RS10560 PF00575 S1 RNA binding domain EPB53_RS10565 PF08032 RNA 2'-O ribose methyltransferase substrate binding EPB53_RS10565 PF00588 SpoU rRNA Methylase family EPB53_RS10570 PF00338 Ribosomal protein S10p/S20e EPB53_RS10575 PF00297 Ribosomal protein L3 EPB53_RS10580 PF00573 Ribosomal protein L4/L1 family EPB53_RS10585 PF00276 Ribosomal protein L23 EPB53_RS10590 PF03947 Ribosomal Proteins L2, C-terminal domain EPB53_RS10590 PF00181 Ribosomal Proteins L2, RNA binding domain EPB53_RS10595 PF00203 Ribosomal protein S19 EPB53_RS10600 PF00237 Ribosomal protein L22p/L17e EPB53_RS10605 PF07650 KH domain EPB53_RS10605 PF00189 Ribosomal protein S3, C-terminal domain EPB53_RS10610 PF00252 Ribosomal protein L16p/L10e EPB53_RS10615 PF00831 Ribosomal L29 protein EPB53_RS10620 PF00366 Ribosomal protein S17 EPB53_RS10625 PF00238 Ribosomal protein L14p/L23e EPB53_RS10630 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 EPB53_RS10630 PF00467 KOW motif EPB53_RS10635 PF00673 ribosomal L5P family C-terminus EPB53_RS10635 PF00281 Ribosomal protein L5 EPB53_RS10640 PF00253 Ribosomal protein S14p/S29e EPB53_RS10645 PF00410 Ribosomal protein S8 EPB53_RS10650 PF00347 Ribosomal protein L6 EPB53_RS10655 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast EPB53_RS10660 PF00333 Ribosomal protein S5, N-terminal domain EPB53_RS10660 PF03719 Ribosomal protein S5, C-terminal domain EPB53_RS10665 PF00327 Ribosomal protein L30p/L7e EPB53_RS10670 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A EPB53_RS10675 PF00344 SecY translocase EPB53_RS10680 PF00444 Ribosomal protein L36 EPB53_RS10685 PF00416 Ribosomal protein S13/S18 EPB53_RS10690 PF00411 Ribosomal protein S11 EPB53_RS10695 PF01479 S4 domain EPB53_RS10695 PF00163 Ribosomal protein S4/S9 N-terminal domain EPB53_RS10700 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain EPB53_RS10700 PF01000 RNA polymerase Rpb3/RpoA insert domain EPB53_RS10700 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain EPB53_RS10705 PF01196 Ribosomal protein L17 EPB53_RS10715 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase EPB53_RS10715 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EPB53_RS10725 PF13673 Acetyltransferase (GNAT) domain EPB53_RS10730 PF00270 DEAD/DEAH box helicase EPB53_RS10730 PF03880 DbpA RNA binding domain EPB53_RS10730 PF00271 Helicase conserved C-terminal domain EPB53_RS10740 PF00149 Calcineurin-like phosphoesterase EPB53_RS10740 PF02872 5'-nucleotidase, C-terminal domain EPB53_RS10745 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EPB53_RS10745 PF14824 Sirohaem biosynthesis protein central EPB53_RS10745 PF10414 Sirohaem synthase dimerisation region EPB53_RS10750 PF01507 Phosphoadenosine phosphosulfate reductase family EPB53_RS10755 PF00009 Elongation factor Tu GTP binding domain EPB53_RS10780 PF00005 ABC transporter EPB53_RS10780 PF02687 FtsX-like permease family EPB53_RS10780 PF12704 MacB-like periplasmic core domain EPB53_RS10795 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) EPB53_RS10805 PF01625 Peptide methionine sulfoxide reductase EPB53_RS10810 PF01103 Surface antigen EPB53_RS10810 PF17243 POTRA domain TamA domain 1 EPB53_RS10820 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like EPB53_RS10825 PF00719 Inorganic pyrophosphatase EPB53_RS10830 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain EPB53_RS10835 PF01225 Mur ligase family, catalytic domain EPB53_RS10835 PF02875 Mur ligase family, glutamate ligase domain EPB53_RS10835 PF08245 Mur ligase middle domain EPB53_RS10840 PF02441 Flavoprotein EPB53_RS10855 PF00005 ABC transporter EPB53_RS10860 PF04751 Protein of unknown function (DUF615) EPB53_RS10865 PF01523 Putative modulator of DNA gyrase EPB53_RS10875 PF00381 PTS HPr component phosphorylation site EPB53_RS10880 PF03668 P-loop ATPase protein family EPB53_RS10885 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EPB53_RS10890 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein EPB53_RS10895 PF04552 Sigma-54, DNA binding domain EPB53_RS10895 PF00309 Sigma-54 factor, Activator interacting domain (AID) EPB53_RS10895 PF04963 Sigma-54 factor, core binding domain EPB53_RS10900 PF00005 ABC transporter EPB53_RS10900 PF12399 Branched-chain amino acid ATP-binding cassette transporter EPB53_RS10905 PF03968 OstA-like protein EPB53_RS10925 PF01699 Sodium/calcium exchanger protein EPB53_RS10930 PF00005 ABC transporter EPB53_RS10935 PF02405 Permease MlaE EPB53_RS10940 PF02470 MlaD protein EPB53_RS10945 PF05494 MlaC protein EPB53_RS10955 PF01722 BolA-like protein EPB53_RS10960 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EPB53_RS10970 PF01042 Endoribonuclease L-PSP EPB53_RS10980 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EPB53_RS10980 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EPB53_RS10985 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EPB53_RS10985 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EPB53_RS10990 PF13638 PIN domain EPB53_RS10990 PF02562 PhoH-like protein EPB53_RS10995 PF00271 Helicase conserved C-terminal domain EPB53_RS10995 PF12137 RNA polymerase recycling family C-terminal EPB53_RS10995 PF18337 RapA N-terminal Tudor like domain EPB53_RS10995 PF18339 RapA N-terminal Tudor like domain 1 EPB53_RS10995 PF00176 SNF2 family N-terminal domain EPB53_RS11010 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EPB53_RS11010 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EPB53_RS11015 PF10458 Valyl tRNA synthetase tRNA binding arm EPB53_RS11015 PF08264 Anticodon-binding domain of tRNA EPB53_RS11015 PF00133 tRNA synthetases class I (I, L, M and V) EPB53_RS11020 PF04364 DNA polymerase III chi subunit, HolC EPB53_RS11025 PF00883 Cytosol aminopeptidase family, catalytic domain EPB53_RS11025 PF02789 Cytosol aminopeptidase family, N-terminal domain EPB53_RS11095 PF00694 Aconitase C-terminal domain EPB53_RS11100 PF00330 Aconitase family (aconitate hydratase) EPB53_RS11105 PF00180 Isocitrate/isopropylmalate dehydrogenase EPB53_RS11110 PF08502 LeuA allosteric (dimerisation) domain EPB53_RS11110 PF00682 HMGL-like EPB53_RS11115 PF01569 PAP2 superfamily EPB53_RS11125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB53_RS11125 PF03466 LysR substrate binding domain EPB53_RS11130 PF00501 AMP-binding enzyme EPB53_RS11135 PF00205 Thiamine pyrophosphate enzyme, central domain EPB53_RS11135 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EPB53_RS11135 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EPB53_RS11140 PF10369 Small subunit of acetolactate synthase EPB53_RS11145 PF01842 ACT domain EPB53_RS11145 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EPB53_RS11145 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EPB53_RS11150 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) EPB53_RS11155 PF01812 5-formyltetrahydrofolate cyclo-ligase family EPB53_RS11165 PF05164 Cell division protein ZapA EPB53_RS11170 PF03695 Uncharacterised protein family (UPF0149) EPB53_RS11175 PF01494 FAD binding domain EPB53_RS11180 PF01494 FAD binding domain EPB53_RS11200 PF03937 Flavinator of succinate dehydrogenase EPB53_RS11210 PF00890 FAD binding domain EPB53_RS11210 PF02910 Fumarate reductase flavoprotein C-term EPB53_RS11215 PF08281 Sigma-70, region 4 EPB53_RS11215 PF04542 Sigma-70 region 2 EPB53_RS11225 PF17188 MucB/RseB C-terminal domain EPB53_RS11225 PF03888 MucB/RseB N-terminal domain EPB53_RS11235 PF00679 Elongation factor G C-terminus EPB53_RS11235 PF00009 Elongation factor Tu GTP binding domain EPB53_RS11235 PF03144 Elongation factor Tu domain 2 EPB53_RS11235 PF06421 GTP-binding protein LepA C-terminus EPB53_RS11240 PF10502 Signal peptidase, peptidase S26 EPB53_RS11245 PF00035 Double-stranded RNA binding motif EPB53_RS11245 PF14622 Ribonuclease-III-like EPB53_RS11255 PF02565 Recombination protein O C terminal EPB53_RS11255 PF11967 Recombination protein O N terminal EPB53_RS11260 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ EPB53_RS11265 PF01648 4'-phosphopantetheinyl transferase superfamily EPB53_RS11270 PF00672 HAMP domain EPB53_RS11270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB53_RS11270 PF00512 His Kinase A (phospho-acceptor) domain EPB53_RS11270 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EPB53_RS11270 PF00072 Response regulator receiver domain EPB53_RS11270 PF01627 Hpt domain EPB53_RS11275 PF01938 TRAM domain EPB53_RS11275 PF05958 tRNA (Uracil-5-)-methyltransferase EPB53_RS11285 PF03819 MazG nucleotide pyrophosphohydrolase domain EPB53_RS11290 PF00117 Glutamine amidotransferase class-I EPB53_RS11290 PF06418 CTP synthase N-terminus EPB53_RS11295 PF03952 Enolase, N-terminal domain EPB53_RS11295 PF00113 Enolase, C-terminal TIM barrel domain EPB53_RS11300 PF12627 Probable RNA and SrmB- binding site of polymerase A EPB53_RS11300 PF01743 Poly A polymerase head domain EPB53_RS11300 PF01966 HD domain EPB53_RS11305 PF08239 Bacterial SH3 domain EPB53_RS11315 PF01865 Protein of unknown function DUF47 EPB53_RS11320 PF01928 CYTH domain EPB53_RS11325 PF00672 HAMP domain EPB53_RS11325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB53_RS11335 PF00294 pfkB family carbohydrate kinase EPB53_RS11335 PF01467 Cytidylyltransferase-like EPB53_RS11340 PF02321 Outer membrane efflux protein EPB53_RS11345 PF00293 NUDIX domain EPB53_RS11350 PF06853 Protein of unknown function (DUF1249) EPB53_RS11355 PF00149 Calcineurin-like phosphoesterase EPB53_RS11360 PF05728 Uncharacterised protein family (UPF0227) EPB53_RS11365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB53_RS11365 PF01751 Toprim domain EPB53_RS11365 PF00986 DNA gyrase B subunit, carboxyl terminus EPB53_RS11365 PF00204 DNA gyrase B EPB53_RS11370 PF03989 DNA gyrase C-terminal domain, beta-propeller EPB53_RS11370 PF00521 DNA gyrase/topoisomerase IV, subunit A EPB53_RS11375 PF03884 DNA gyrase inhibitor YacG EPB53_RS11380 PF07072 Cell division protein EPB53_RS11385 PF01121 Dephospho-CoA kinase EPB53_RS11395 PF00482 Type II secretion system (T2SS), protein F EPB53_RS11400 PF00437 Type II/IV secretion system protein EPB53_RS11400 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain EPB53_RS11405 PF07963 Prokaryotic N-terminal methylation motif EPB53_RS11405 PF00114 Pilin (bacterial filament) EPB53_RS11410 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain EPB53_RS11410 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain EPB53_RS11415 PF01510 N-acetylmuramoyl-L-alanine amidase EPB53_RS11420 PF00258 Flavodoxin EPB53_RS11425 PF02899 Phage integrase, N-terminal SAM-like domain EPB53_RS11425 PF00589 Phage integrase family EPB53_RS11430 PF13098 Thioredoxin-like domain EPB53_RS11430 PF10411 Disulfide bond isomerase protein N-terminus EPB53_RS11440 PF00392 Bacterial regulatory proteins, gntR family EPB53_RS11440 PF07729 FCD domain EPB53_RS11450 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EPB53_RS11450 PF02817 e3 binding domain EPB53_RS11450 PF00364 Biotin-requiring enzyme EPB53_RS11455 PF07992 Pyridine nucleotide-disulphide oxidoreductase EPB53_RS11455 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EPB53_RS11460 PF00440 Bacterial regulatory proteins, tetR family EPB53_RS11465 PF00156 Phosphoribosyl transferase domain EPB53_RS11470 PF00484 Carbonic anhydrase EPB53_RS11475 PF00005 ABC transporter EPB53_RS11485 PF02569 Pantoate-beta-alanine ligase EPB53_RS11490 PF02548 Ketopantoate hydroxymethyltransferase EPB53_RS11500 PF12627 Probable RNA and SrmB- binding site of polymerase A EPB53_RS11500 PF01743 Poly A polymerase head domain EPB53_RS11500 PF12626 Polymerase A arginine-rich C-terminus EPB53_RS11505 PF00749 tRNA synthetases class I (E and Q), catalytic domain EPB53_RS11510 PF01258 Prokaryotic dksA/traR C4-type zinc finger EPB53_RS11515 PF17746 SfsA N-terminal OB domain EPB53_RS11515 PF03749 Sugar fermentation stimulation protein RE domain EPB53_RS11520 PF00271 Helicase conserved C-terminal domain EPB53_RS11520 PF08482 ATP-dependent helicase C-terminal EPB53_RS11520 PF04408 Helicase associated domain (HA2) EPB53_RS11520 PF00270 DEAD/DEAH box helicase EPB53_RS11525 PF00905 Penicillin binding protein transpeptidase domain EPB53_RS11525 PF00912 Transglycosylase EPB53_RS11525 PF14814 Bifunctional transglycosylase second domain EPB53_RS11530 PF01734 Patatin-like phospholipase EPB53_RS11570 PF00005 ABC transporter EPB53_RS11575 PF00950 ABC 3 transport family EPB53_RS11585 PF00486 Transcriptional regulatory protein, C terminal EPB53_RS11585 PF00072 Response regulator receiver domain EPB53_RS11595 PF07715 TonB-dependent Receptor Plug Domain EPB53_RS11595 PF00593 TonB dependent receptor EPB53_RS11600 PF00593 TonB dependent receptor EPB53_RS11600 PF07715 TonB-dependent Receptor Plug Domain EPB53_RS11605 PF02595 Glycerate kinase family EPB53_RS11610 PF06062 Uncharacterised protein family (UPF0231) EPB53_RS11615 PF00543 Nitrogen regulatory protein P-II EPB53_RS11620 PF00909 Ammonium Transporter Family EPB53_RS11625 PF00005 ABC transporter EPB53_RS11625 PF08402 TOBE domain EPB53_RS11635 PF01547 Bacterial extracellular solute-binding protein EPB53_RS11640 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EPB53_RS11640 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EPB53_RS11640 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EPB53_RS11640 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EPB53_RS11645 PF06165 Glycosyltransferase family 36 EPB53_RS11645 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain EPB53_RS11650 PF02838 Glycosyl hydrolase family 20, domain 2 EPB53_RS11650 PF00728 Glycosyl hydrolase family 20, catalytic domain EPB53_RS11660 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EPB53_RS11660 PF00005 ABC transporter EPB53_RS11665 PF00005 ABC transporter EPB53_RS11665 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EPB53_RS11670 PF00528 Binding-protein-dependent transport system inner membrane component EPB53_RS11670 PF12911 N-terminal TM domain of oligopeptide transport permease C EPB53_RS11675 PF00528 Binding-protein-dependent transport system inner membrane component EPB53_RS11680 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EPB53_RS11685 PF00072 Response regulator receiver domain EPB53_RS11685 PF00497 Bacterial extracellular solute-binding proteins, family 3 EPB53_RS11685 PF00512 His Kinase A (phospho-acceptor) domain EPB53_RS11685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB53_RS11685 PF01627 Hpt domain EPB53_RS11700 PF00202 Aminotransferase class-III EPB53_RS11710 PF01551 Peptidase family M23 EPB53_RS11710 PF04225 Opacity-associated protein A LysM-like domain EPB53_RS11715 PF01479 S4 domain EPB53_RS11715 PF00579 tRNA synthetases class I (W and Y) EPB53_RS11720 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family EPB53_RS11725 PF13609 Gram-negative porin EPB53_RS11730 PF03449 Transcription elongation factor, N-terminal EPB53_RS11730 PF01272 Transcription elongation factor, GreA/GreB, C-term EPB53_RS11735 PF01985 CRS1 / YhbY (CRM) domain EPB53_RS11740 PF01728 FtsJ-like methyltransferase EPB53_RS11750 PF00809 Pterin binding enzyme EPB53_RS11755 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EPB53_RS11755 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EPB53_RS11755 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EPB53_RS11755 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EPB53_RS11760 PF03840 Preprotein translocase SecG subunit EPB53_RS11775 PF17384 RimP C-terminal SH3 domain EPB53_RS11775 PF02576 RimP N-terminal domain EPB53_RS11780 PF00575 S1 RNA binding domain EPB53_RS11780 PF08529 NusA N-terminal domain EPB53_RS11780 PF13184 NusA-like KH domain EPB53_RS11785 PF11987 Translation-initiation factor 2 EPB53_RS11785 PF00009 Elongation factor Tu GTP binding domain EPB53_RS11785 PF04760 Translation initiation factor IF-2, N-terminal region EPB53_RS11785 PF08364 Bacterial translation initiation factor IF-2 associated region EPB53_RS11790 PF02033 Ribosome-binding factor A EPB53_RS11800 PF00312 Ribosomal protein S15 EPB53_RS11805 PF03725 3' exoribonuclease family, domain 2 EPB53_RS11805 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain EPB53_RS11805 PF00575 S1 RNA binding domain EPB53_RS11805 PF00013 KH domain EPB53_RS11805 PF01138 3' exoribonuclease family, domain 1 EPB53_RS11810 PF07719 Tetratricopeptide repeat EPB53_RS11810 PF13181 Tetratricopeptide repeat EPB53_RS11815 PF01136 Peptidase family U32 EPB53_RS11820 PF01136 Peptidase family U32 EPB53_RS11825 PF00563 EAL domain EPB53_RS11825 PF03707 Bacterial signalling protein N terminal repeat EPB53_RS11825 PF00990 Diguanylate cyclase, GGDEF domain EPB53_RS11830 PF02036 SCP-2 sterol transfer family EPB53_RS11835 PF13508 Acetyltransferase (GNAT) domain EPB53_RS11850 PF03707 Bacterial signalling protein N terminal repeat EPB53_RS11850 PF00563 EAL domain EPB53_RS11850 PF00990 Diguanylate cyclase, GGDEF domain EPB53_RS11855 PF16658 Class II release factor RF3, C-terminal domain EPB53_RS11855 PF03144 Elongation factor Tu domain 2 EPB53_RS11855 PF00009 Elongation factor Tu GTP binding domain EPB53_RS11860 PF00270 DEAD/DEAH box helicase EPB53_RS11860 PF00271 Helicase conserved C-terminal domain EPB53_RS11865 PF05175 Methyltransferase small domain EPB53_RS11870 PF05525 Branched-chain amino acid transport protein EPB53_RS11880 PF01336 OB-fold nucleic acid binding domain EPB53_RS11880 PF00152 tRNA synthetases class II (D, K and N) EPB53_RS11890 PF00248 Aldo/keto reductase family EPB53_RS11895 PF02976 DNA mismatch repair enzyme MutH EPB53_RS11900 PF00293 NUDIX domain EPB53_RS11905 PF02896 PEP-utilising enzyme, TIM barrel domain EPB53_RS11905 PF00391 PEP-utilising enzyme, mobile domain EPB53_RS11905 PF05524 PEP-utilising enzyme, N-terminal EPB53_RS11905 PF01590 GAF domain EPB53_RS11910 PF01925 Sulfite exporter TauE/SafE EPB53_RS11920 PF00303 Thymidylate synthase EPB53_RS11925 PF02690 Na+/Pi-cotransporter EPB53_RS11930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB53_RS11930 PF03466 LysR substrate binding domain EPB53_RS11935 PF01022 Bacterial regulatory protein, arsR family EPB53_RS11940 PF01649 Ribosomal protein S20 EPB53_RS11945 PF03023 Lipid II flippase MurJ EPB53_RS11955 PF00133 tRNA synthetases class I (I, L, M and V) EPB53_RS11955 PF08264 Anticodon-binding domain of tRNA EPB53_RS11955 PF06827 Zinc finger found in FPG and IleRS EPB53_RS11960 PF01252 Signal peptidase (SPase) II EPB53_RS11965 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EPB53_RS11970 PF02401 LytB protein EPB53_RS11975 PF02554 Carbon starvation protein CstA EPB53_RS11985 PF03702 Anhydro-N-acetylmuramic acid kinase EPB53_RS11995 PF00072 Response regulator receiver domain EPB53_RS11995 PF04397 LytTr DNA-binding domain EPB53_RS12000 PF07694 5TMR of 5TMR-LYT EPB53_RS12000 PF06580 Histidine kinase EPB53_RS12005 PF00793 DAHP synthetase I family EPB53_RS12010 PF01817 Chorismate mutase type II EPB53_RS12010 PF02153 Prephenate dehydrogenase EPB53_RS12015 PF07238 PilZ domain EPB53_RS12025 PF14718 Soluble lytic murein transglycosylase L domain EPB53_RS12025 PF01464 Transglycosylase SLT domain EPB53_RS12030 PF01371 Trp repressor protein EPB53_RS12035 PF01931 Protein of unknown function DUF84 EPB53_RS12040 PF01817 Chorismate mutase type II EPB53_RS12040 PF00800 Prephenate dehydratase EPB53_RS12045 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein EPB53_RS12050 PF13525 Outer membrane lipoprotein EPB53_RS12055 PF00849 RNA pseudouridylate synthase EPB53_RS12055 PF01479 S4 domain EPB53_RS12060 PF02578 Multi-copper polyphenol oxidoreductase laccase EPB53_RS12065 PF07724 AAA domain (Cdc48 subfamily) EPB53_RS12065 PF10431 C-terminal, D2-small domain, of ClpB protein EPB53_RS12065 PF02861 Clp amino terminal domain, pathogenicity island component EPB53_RS12065 PF17871 AAA lid domain EPB53_RS12065 PF00004 ATPase family associated with various cellular activities (AAA) EPB53_RS12125 PF07690 Major Facilitator Superfamily EPB53_RS12130 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EPB53_RS12140 PF05175 Methyltransferase small domain EPB53_RS12145 PF01722 BolA-like protein EPB53_RS12150 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) EPB53_RS12150 PF11973 NQRA C-terminal domain EPB53_RS12155 PF03116 NQR2, RnfD, RnfE family EPB53_RS12160 PF04205 FMN-binding domain EPB53_RS12165 PF02508 Rnf-Nqr subunit, membrane protein EPB53_RS12170 PF02508 Rnf-Nqr subunit, membrane protein EPB53_RS12175 PF00111 2Fe-2S iron-sulfur cluster binding domain EPB53_RS12175 PF00970 Oxidoreductase FAD-binding domain EPB53_RS12175 PF00175 Oxidoreductase NAD-binding domain EPB53_RS12180 PF02424 ApbE family EPB53_RS12190 PF00817 impB/mucB/samB family EPB53_RS12190 PF11799 impB/mucB/samB family C-terminal domain EPB53_RS12200 PF00209 Sodium:neurotransmitter symporter family EPB53_RS12210 PF08443 RimK-like ATP-grasp domain EPB53_RS12210 PF18030 RimK PreATP-grasp domain EPB53_RS12215 PF08443 RimK-like ATP-grasp domain EPB53_RS12215 PF18030 RimK PreATP-grasp domain EPB53_RS12220 PF01546 Peptidase family M20/M25/M40 EPB53_RS12220 PF07687 Peptidase dimerisation domain EPB53_RS12225 PF00860 Permease family EPB53_RS12230 PF00156 Phosphoribosyl transferase domain EPB53_RS12235 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) EPB53_RS12240 PF07417 Sigma factor-binding transcriptional regulator Crl EPB53_RS12245 PF01472 PUA domain EPB53_RS12245 PF00696 Amino acid kinase family EPB53_RS12250 PF00171 Aldehyde dehydrogenase family EPB53_RS12255 PF03477 ATP cone domain EPB53_RS12260 PF01872 RibD C-terminal domain EPB53_RS12260 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EPB53_RS12265 PF00677 Lumazine binding domain EPB53_RS12270 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase EPB53_RS12270 PF00925 GTP cyclohydrolase II EPB53_RS12275 PF00885 6,7-dimethyl-8-ribityllumazine synthase EPB53_RS12280 PF01029 NusB family EPB53_RS12290 PF04608 Phosphatidylglycerophosphatase A EPB53_RS12295 PF11944 Protein of unknown function (DUF3461) EPB53_RS12300 PF01966 HD domain EPB53_RS12300 PF08335 GlnD PII-uridylyltransferase EPB53_RS12300 PF01909 Nucleotidyltransferase domain EPB53_RS12305 PF00557 Metallopeptidase family M24 EPB53_RS12310 PF00318 Ribosomal protein S2 EPB53_RS12315 PF00889 Elongation factor TS EPB53_RS12320 PF00696 Amino acid kinase family EPB53_RS12325 PF01765 Ribosome recycling factor EPB53_RS12330 PF01255 Putative undecaprenyl diphosphate synthase EPB53_RS12340 PF13288 DXP reductoisomerase C-terminal domain EPB53_RS12340 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase EPB53_RS12340 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain EPB53_RS12345 PF17820 PDZ domain EPB53_RS12345 PF02163 Peptidase family M50 EPB53_RS12350 PF01103 Surface antigen EPB53_RS12350 PF07244 Surface antigen variable number repeat EPB53_RS12355 PF03938 Outer membrane protein (OmpH-like) EPB53_RS12360 PF00132 Bacterial transferase hexapeptide (six repeats) EPB53_RS12360 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD EPB53_RS12365 PF07977 FabA-like domain EPB53_RS12370 PF00132 Bacterial transferase hexapeptide (six repeats) EPB53_RS12370 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 EPB53_RS12375 PF02684 Lipid-A-disaccharide synthetase EPB53_RS12380 PF01351 Ribonuclease HII EPB53_RS12385 PF14579 Helix-hairpin-helix motif EPB53_RS12385 PF01336 OB-fold nucleic acid binding domain EPB53_RS12385 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EPB53_RS12385 PF07733 Bacterial DNA polymerase III alpha NTPase domain EPB53_RS12385 PF02811 PHP domain EPB53_RS12395 PF09179 TilS substrate binding domain EPB53_RS12395 PF11734 TilS substrate C-terminal domain EPB53_RS12395 PF01171 PP-loop family EPB53_RS12400 PF00543 Nitrogen regulatory protein P-II EPB53_RS12405 PF03372 Endonuclease/Exonuclease/phosphatase family EPB53_RS12410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB53_RS12410 PF00072 Response regulator receiver domain EPB53_RS12415 PF17327 Acyl homoserine lactone synthase EPB53_RS12425 PF01476 LysM domain EPB53_RS12425 PF01464 Transglycosylase SLT domain EPB53_RS12430 PF16123 Hydroxyacylglutathione hydrolase C-terminus EPB53_RS12430 PF00753 Metallo-beta-lactamase superfamily EPB53_RS12435 PF08241 Methyltransferase domain EPB53_RS12440 PF00075 RNase H EPB53_RS12445 PF00929 Exonuclease EPB53_RS12460 PF13580 SIS domain EPB53_RS12465 PF13230 Glutamine amidotransferases class-II EPB53_RS12470 PF00551 Formyl transferase EPB53_RS12475 PF02769 AIR synthase related protein, C-terminal domain EPB53_RS12475 PF00586 AIR synthase related protein, N-terminal domain EPB53_RS12485 PF00849 RNA pseudouridylate synthase EPB53_RS12485 PF01479 S4 domain EPB53_RS12490 PF01713 Smr domain EPB53_RS12505 PF03173 Putative carbohydrate binding domain EPB53_RS12505 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain EPB53_RS12505 PF00728 Glycosyl hydrolase family 20, catalytic domain EPB53_RS12505 PF02838 Glycosyl hydrolase family 20, domain 2 EPB53_RS12510 PF00403 Heavy-metal-associated domain EPB53_RS12515 PF00749 tRNA synthetases class I (E and Q), catalytic domain EPB53_RS12520 PF00691 OmpA family EPB53_RS12520 PF05736 OprF membrane domain EPB53_RS12555 PF04316 Anti-sigma-28 factor, FlgM EPB53_RS12565 PF01584 CheW-like domain EPB53_RS12565 PF00072 Response regulator receiver domain EPB53_RS12570 PF03705 CheR methyltransferase, all-alpha domain EPB53_RS12570 PF01739 CheR methyltransferase, SAM binding domain EPB53_RS12575 PF00460 Flagella basal body rod protein EPB53_RS12580 PF00460 Flagella basal body rod protein EPB53_RS12580 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EPB53_RS12585 PF13861 FlgD Tudor-like domain EPB53_RS12585 PF13860 FlgD Ig-like domain EPB53_RS12585 PF03963 Flagellar hook capping protein - N-terminal region EPB53_RS12590 PF07559 Flagellar basal body protein FlaE EPB53_RS12590 PF00460 Flagella basal body rod protein EPB53_RS12590 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EPB53_RS12595 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EPB53_RS12595 PF00460 Flagella basal body rod protein EPB53_RS12600 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EPB53_RS12600 PF00460 Flagella basal body rod protein EPB53_RS12605 PF02107 Flagellar L-ring protein EPB53_RS12610 PF02119 Flagellar P-ring protein EPB53_RS12615 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EPB53_RS12615 PF10135 Rod binding protein EPB53_RS12620 PF07196 Flagellin hook IN motif EPB53_RS12620 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EPB53_RS12630 PF00669 Bacterial flagellin N-terminal helical region EPB53_RS12630 PF07196 Flagellin hook IN motif EPB53_RS12630 PF00700 Bacterial flagellin C-terminal helical region EPB53_RS12635 PF00669 Bacterial flagellin N-terminal helical region EPB53_RS12635 PF07196 Flagellin hook IN motif EPB53_RS12635 PF00700 Bacterial flagellin C-terminal helical region EPB53_RS12715 PF06071 Protein of unknown function (DUF933) EPB53_RS12715 PF01926 50S ribosome-binding GTPase EPB53_RS12725 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase EPB53_RS12725 PF14572 Phosphoribosyl synthetase-associated domain EPB53_RS12730 PF08544 GHMP kinases C terminal EPB53_RS12730 PF00288 GHMP kinases N terminal domain EPB53_RS12735 PF03550 Outer membrane lipoprotein LolB EPB53_RS12745 PF00472 RF-1 domain EPB53_RS12745 PF03462 PCRF domain EPB53_RS12750 PF13847 Methyltransferase domain EPB53_RS12750 PF17827 PrmC N-terminal domain EPB53_RS12755 PF04247 Invasion gene expression up-regulator, SirB EPB53_RS12760 PF13369 Transglutaminase-like superfamily EPB53_RS12785 PF03358 NADPH-dependent FMN reductase EPB53_RS12790 PF03960 ArsC family EPB53_RS12795 PF01435 Peptidase family M48 EPB53_RS12795 PF13181 Tetratricopeptide repeat EPB53_RS12805 PF01594 AI-2E family transporter EPB53_RS12810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB53_RS12810 PF00672 HAMP domain EPB53_RS12810 PF02743 Cache domain EPB53_RS12815 PF00578 AhpC/TSA family EPB53_RS12820 PF01842 ACT domain EPB53_RS12825 PF00701 Dihydrodipicolinate synthetase family EPB53_RS12840 PF02557 D-alanyl-D-alanine carboxypeptidase EPB53_RS12845 PF07687 Peptidase dimerisation domain EPB53_RS12845 PF01546 Peptidase family M20/M25/M40 EPB53_RS12850 PF03960 ArsC family EPB53_RS12865 PF11143 Protein of unknown function (DUF2919) EPB53_RS12870 PF00669 Bacterial flagellin N-terminal helical region EPB53_RS12870 PF07196 Flagellin hook IN motif EPB53_RS12870 PF00700 Bacterial flagellin C-terminal helical region EPB53_RS12875 PF00700 Bacterial flagellin C-terminal helical region EPB53_RS12875 PF07196 Flagellin hook IN motif EPB53_RS12875 PF00669 Bacterial flagellin N-terminal helical region EPB53_RS12880 PF00669 Bacterial flagellin N-terminal helical region EPB53_RS12880 PF07196 Flagellin hook IN motif EPB53_RS12880 PF00700 Bacterial flagellin C-terminal helical region EPB53_RS12885 PF03646 FlaG protein EPB53_RS12890 PF07196 Flagellin hook IN motif EPB53_RS12890 PF07195 Flagellar hook-associated protein 2 C-terminus EPB53_RS12890 PF02465 Flagellar hook-associated protein 2 N-terminus EPB53_RS12900 PF02561 Flagellar protein FliS EPB53_RS12905 PF02954 Bacterial regulatory protein, Fis family EPB53_RS12905 PF00158 Sigma-54 interaction domain EPB53_RS12905 PF06490 Flagellar regulatory protein FleQ EPB53_RS12910 PF13188 PAS domain EPB53_RS12910 PF00512 His Kinase A (phospho-acceptor) domain EPB53_RS12910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB53_RS12920 PF02049 Flagellar hook-basal body complex protein FliE EPB53_RS12930 PF14841 FliG middle domain EPB53_RS12930 PF14842 FliG N-terminal domain EPB53_RS12930 PF01706 FliG C-terminal domain EPB53_RS12940 PF18269 T3SS EscN ATPase C-terminal domain EPB53_RS12940 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EPB53_RS12960 PF02154 Flagellar motor switch protein FliM EPB53_RS12960 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EPB53_RS12965 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EPB53_RS12975 PF00813 FliP family EPB53_RS12980 PF01313 Bacterial export proteins, family 3 EPB53_RS12985 PF01311 Bacterial export proteins, family 1 EPB53_RS12995 PF01713 Smr domain EPB53_RS13000 PF05175 Methyltransferase small domain EPB53_RS13005 PF01264 Chorismate synthase EPB53_RS13010 PF03458 UPF0126 domain EPB53_RS13015 PF04315 Elongation factor P hydroxylase EPB53_RS13020 PF08891 YfcL protein EPB53_RS13025 PF03358 NADPH-dependent FMN reductase EPB53_RS13035 PF02801 Beta-ketoacyl synthase, C-terminal domain EPB53_RS13035 PF00109 Beta-ketoacyl synthase, N-terminal domain EPB53_RS13040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EPB53_RS13040 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EPB53_RS13040 PF11890 Domain of unknown function (DUF3410) EPB53_RS13045 PF01118 Semialdehyde dehydrogenase, NAD binding domain EPB53_RS13045 PF02774 Semialdehyde dehydrogenase, dimerisation domain EPB53_RS13050 PF01475 Ferric uptake regulator family EPB53_RS13060 PF03466 LysR substrate binding domain EPB53_RS13060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB53_RS13065 PF03788 LrgA family EPB53_RS13070 PF04172 LrgB-like family EPB53_RS13075 PF00258 Flavodoxin EPB53_RS13080 PF12697 Alpha/beta hydrolase family EPB53_RS13085 PF17206 SeqA protein N-terminal domain EPB53_RS13085 PF03925 SeqA protein C-terminal domain EPB53_RS13090 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EPB53_RS13090 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EPB53_RS13090 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EPB53_RS13090 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EPB53_RS13105 PF00285 Citrate synthase, C-terminal domain EPB53_RS13110 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit EPB53_RS13115 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit EPB53_RS13120 PF00890 FAD binding domain EPB53_RS13120 PF02910 Fumarate reductase flavoprotein C-term EPB53_RS13125 PF13085 2Fe-2S iron-sulfur cluster binding domain EPB53_RS13130 PF16078 2-oxoglutarate dehydrogenase N-terminus EPB53_RS13130 PF00676 Dehydrogenase E1 component EPB53_RS13130 PF16870 2-oxoglutarate dehydrogenase C-terminal EPB53_RS13130 PF02779 Transketolase, pyrimidine binding domain EPB53_RS13140 PF08442 ATP-grasp domain EPB53_RS13140 PF00549 CoA-ligase EPB53_RS13145 PF02629 CoA binding domain EPB53_RS13145 PF00549 CoA-ligase EPB53_RS13160 PF00950 ABC 3 transport family EPB53_RS13165 PF00005 ABC transporter EPB53_RS13170 PF01297 Zinc-uptake complex component A periplasmic EPB53_RS13180 PF04023 FeoA domain EPB53_RS13185 PF07670 Nucleoside recognition EPB53_RS13185 PF02421 Ferrous iron transport protein B EPB53_RS13185 PF07664 Ferrous iron transport protein B C terminus EPB53_RS13200 PF03485 Arginyl tRNA synthetase N terminal domain EPB53_RS13200 PF00750 tRNA synthetases class I (R) EPB53_RS13200 PF05746 DALR anticodon binding domain EPB53_RS13205 PF06185 YecM protein EPB53_RS13210 PF05193 Peptidase M16 inactive domain EPB53_RS13210 PF00675 Insulinase (Peptidase family M16) EPB53_RS13215 PF00300 Histidine phosphatase superfamily (branch 1) EPB53_RS13225 PF00448 SRP54-type protein, GTPase domain EPB53_RS13230 PF10609 NUBPL iron-transfer P-loop NTPase EPB53_RS13235 PF04545 Sigma-70, region 4 EPB53_RS13235 PF04539 Sigma-70 region 3 EPB53_RS13235 PF04542 Sigma-70 region 2 EPB53_RS13240 PF00072 Response regulator receiver domain EPB53_RS13245 PF04344 Chemotaxis phosphatase, CheZ EPB53_RS13250 PF01627 Hpt domain EPB53_RS13250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB53_RS13250 PF02895 Signal transducing histidine kinase, homodimeric domain EPB53_RS13250 PF01584 CheW-like domain EPB53_RS13250 PF00072 Response regulator receiver domain EPB53_RS13270 PF01584 CheW-like domain EPB53_RS13280 PF04333 MlaA lipoprotein EPB53_RS13300 PF00462 Glutaredoxin EPB53_RS13310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB53_RS13310 PF08269 Cache domain EPB53_RS13315 PF00672 HAMP domain EPB53_RS13315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB53_RS13315 PF12729 Four helix bundle sensory module for signal transduction EPB53_RS13320 PF00528 Binding-protein-dependent transport system inner membrane component EPB53_RS13325 PF00528 Binding-protein-dependent transport system inner membrane component EPB53_RS13330 PF00005 ABC transporter EPB53_RS13345 PF00753 Metallo-beta-lactamase superfamily EPB53_RS13355 PF01740 STAS domain EPB53_RS13355 PF00916 Sulfate permease family EPB53_RS13360 PF12848 ABC transporter EPB53_RS13360 PF00005 ABC transporter EPB53_RS13375 PF16884 N-terminal domain of oxidoreductase EPB53_RS13375 PF00107 Zinc-binding dehydrogenase EPB53_RS13380 PF00440 Bacterial regulatory proteins, tetR family EPB53_RS13380 PF16925 Tetracyclin repressor-like, C-terminal domain EPB53_RS13385 PF01844 HNH endonuclease EPB53_RS13410 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EPB53_RS13410 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase EPB53_RS13410 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II EPB53_RS13410 PF10371 Domain of unknown function EPB53_RS13410 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg EPB53_RS13415 PF00512 His Kinase A (phospho-acceptor) domain EPB53_RS13415 PF13493 Domain of unknown function (DUF4118) EPB53_RS13415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB53_RS13415 PF02702 Osmosensitive K+ channel His kinase sensor domain EPB53_RS13420 PF00072 Response regulator receiver domain EPB53_RS13420 PF00486 Transcriptional regulatory protein, C terminal EPB53_RS13425 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) EPB53_RS13440 PF13847 Methyltransferase domain EPB53_RS13445 PF01263 Aldose 1-epimerase EPB53_RS13450 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EPB53_RS13450 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EPB53_RS13455 PF01641 SelR domain EPB53_RS13465 PF07023 Protein of unknown function (DUF1315) EPB53_RS13470 PF17763 Glutaminase/Asparaginase C-terminal domain EPB53_RS13470 PF00710 Asparaginase, N-terminal EPB53_RS13475 PF01343 Peptidase family S49 EPB53_RS13480 PF07992 Pyridine nucleotide-disulphide oxidoreductase EPB53_RS13480 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EPB53_RS13485 PF00551 Formyl transferase EPB53_RS13485 PF01842 ACT domain EPB53_RS13495 PF13307 Helicase C-terminal domain EPB53_RS13495 PF04851 Type III restriction enzyme, res subunit EPB53_RS13500 PF00814 Glycoprotease family EPB53_RS13515 PF08241 Methyltransferase domain EPB53_RS13515 PF12697 Alpha/beta hydrolase family EPB53_RS13520 PF13193 AMP-binding enzyme C-terminal domain EPB53_RS13520 PF00501 AMP-binding enzyme EPB53_RS13525 PF00570 HRDC domain EPB53_RS13525 PF01612 3'-5' exonuclease EPB53_RS13530 PF03776 Septum formation topological specificity factor MinE EPB53_RS13535 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain EPB53_RS13540 PF05209 Septum formation inhibitor MinC, N-terminal domain EPB53_RS13540 PF03775 Septum formation inhibitor MinC, C-terminal domain EPB53_RS13545 PF05166 YcgL domain EPB53_RS13550 PF13406 Transglycosylase SLT domain EPB53_RS13555 PF01933 Uncharacterised protein family UPF0052 EPB53_RS13560 PF06463 Molybdenum Cofactor Synthesis C EPB53_RS13560 PF04055 Radical SAM superfamily EPB53_RS13565 PF00994 Probable molybdopterin binding domain EPB53_RS13570 PF01967 MoaC family EPB53_RS13575 PF02597 ThiS family EPB53_RS13580 PF02391 MoaE protein EPB53_RS13585 PF00571 CBS domain EPB53_RS13585 PF01743 Poly A polymerase head domain EPB53_RS13585 PF01368 DHH family EPB53_RS13585 PF02272 DHHA1 domain EPB53_RS13595 PF01048 Phosphorylase superfamily EPB53_RS13605 PF01588 Putative tRNA binding domain EPB53_RS13605 PF09334 tRNA synthetases class I (M) EPB53_RS13615 PF00485 Phosphoribulokinase / Uridine kinase family EPB53_RS13620 PF05170 AsmA family EPB53_RS13625 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP EPB53_RS13625 PF12557 Cob(I)alamin adenosyltransferase N terminal EPB53_RS13630 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) EPB53_RS13640 PF02803 Thiolase, C-terminal domain EPB53_RS13640 PF00108 Thiolase, N-terminal domain EPB53_RS13650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB53_RS13650 PF03466 LysR substrate binding domain EPB53_RS13655 PF00072 Response regulator receiver domain EPB53_RS13660 PF04304 Protein of unknown function (DUF454) EPB53_RS13665 PF00156 Phosphoribosyl transferase domain EPB53_RS13675 PF00491 Arginase family EPB53_RS13680 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EPB53_RS13680 PF17944 Arginine decarboxylase C-terminal helical extension EPB53_RS13680 PF17810 Arginine decarboxylase helical bundle domain EPB53_RS13695 PF01243 Pyridoxamine 5'-phosphate oxidase EPB53_RS13705 PF01497 Periplasmic binding protein EPB53_RS13710 PF01032 FecCD transport family EPB53_RS13715 PF00005 ABC transporter EPB53_RS13745 PF03473 MOSC domain EPB53_RS13745 PF00111 2Fe-2S iron-sulfur cluster binding domain EPB53_RS13745 PF03476 MOSC N-terminal beta barrel domain EPB53_RS13750 PF01979 Amidohydrolase family EPB53_RS13770 PF08220 DeoR-like helix-turn-helix domain EPB53_RS13770 PF00455 DeoR C terminal sensor domain EPB53_RS13775 PF03472 Autoinducer binding domain EPB53_RS13775 PF00196 Bacterial regulatory proteins, luxR family EPB53_RS13780 PF00765 Autoinducer synthase EPB53_RS13785 PF03061 Thioesterase superfamily EPB53_RS13805 PF00528 Binding-protein-dependent transport system inner membrane component EPB53_RS13810 PF14785 Maltose transport system permease protein MalF P2 domain EPB53_RS13810 PF00528 Binding-protein-dependent transport system inner membrane component EPB53_RS13815 PF01547 Bacterial extracellular solute-binding protein EPB53_RS13820 PF08402 TOBE domain EPB53_RS13820 PF00005 ABC transporter EPB53_RS13830 PF00392 Bacterial regulatory proteins, gntR family EPB53_RS13830 PF00155 Aminotransferase class I and II EPB53_RS13835 PF13302 Acetyltransferase (GNAT) domain EPB53_RS13845 PF02734 DAK2 domain EPB53_RS13845 PF02733 Dak1 domain EPB53_RS13850 PF02734 DAK2 domain EPB53_RS13860 PF02733 Dak1 domain EPB53_RS13865 PF00465 Iron-containing alcohol dehydrogenase EPB53_RS13870 PF00158 Sigma-54 interaction domain EPB53_RS13870 PF02954 Bacterial regulatory protein, Fis family EPB53_RS13870 PF00989 PAS fold EPB53_RS13880 PF00107 Zinc-binding dehydrogenase EPB53_RS13880 PF08240 Alcohol dehydrogenase GroES-like domain EPB53_RS13885 PF00155 Aminotransferase class I and II EPB53_RS13890 PF00657 GDSL-like Lipase/Acylhydrolase EPB53_RS13905 PF03466 LysR substrate binding domain EPB53_RS13905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB53_RS13925 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain EPB53_RS13925 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain EPB53_RS13930 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase EPB53_RS13935 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain EPB53_RS13935 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EPB53_RS13940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB53_RS13940 PF03466 LysR substrate binding domain EPB53_RS13955 PF00141 Peroxidase EPB53_RS13960 PF00210 Ferritin-like domain EPB53_RS13965 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase EPB53_RS13965 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain EPB53_RS13970 PF00072 Response regulator receiver domain EPB53_RS13970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB53_RS13970 PF01627 Hpt domain EPB53_RS13970 PF00989 PAS fold EPB53_RS13970 PF00497 Bacterial extracellular solute-binding proteins, family 3 EPB53_RS13970 PF00512 His Kinase A (phospho-acceptor) domain EPB53_RS13975 PF00196 Bacterial regulatory proteins, luxR family EPB53_RS13975 PF00072 Response regulator receiver domain EPB53_RS13980 PF00691 OmpA family EPB53_RS13980 PF01389 OmpA-like transmembrane domain EPB53_RS13995 PF02753 Pili assembly chaperone PapD, C-terminal domain EPB53_RS13995 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain EPB53_RS14005 PF13954 PapC N-terminal domain EPB53_RS14005 PF13953 PapC C-terminal domain EPB53_RS14005 PF00577 Outer membrane usher protein EPB53_RS14010 PF02753 Pili assembly chaperone PapD, C-terminal domain EPB53_RS14010 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain EPB53_RS14020 PF13426 PAS domain EPB53_RS14020 PF00563 EAL domain EPB53_RS14020 PF00990 Diguanylate cyclase, GGDEF domain EPB53_RS14025 PF07075 Protein of unknown function (DUF1343) EPB53_RS14030 PF01915 Glycosyl hydrolase family 3 C-terminal domain EPB53_RS14030 PF00933 Glycosyl hydrolase family 3 N terminal domain EPB53_RS14035 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EPB53_RS14035 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EPB53_RS14040 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain EPB53_RS14040 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family EPB53_RS14055 PF02001 Protein of unknown function DUF134 EPB53_RS14060 PF03600 Citrate transporter EPB53_RS14075 PF03616 Sodium/glutamate symporter EPB53_RS14085 PF00875 DNA photolyase EPB53_RS14085 PF03441 FAD binding domain of DNA photolyase EPB53_RS14090 PF13411 MerR HTH family regulatory protein EPB53_RS14095 PF08349 Protein of unknown function (DUF1722) EPB53_RS14100 PF01048 Phosphorylase superfamily EPB53_RS14115 PF00990 Diguanylate cyclase, GGDEF domain EPB53_RS14120 PF07238 PilZ domain EPB53_RS14120 PF12945 Flagellar protein YcgR EPB53_RS14130 PF00375 Sodium:dicarboxylate symporter family EPB53_RS14145 PF02264 LamB porin EPB53_RS14155 PF00005 ABC transporter EPB53_RS14155 PF00664 ABC transporter transmembrane region EPB53_RS14165 PF01569 PAP2 superfamily EPB53_RS14170 PF00491 Arginase family EPB53_RS14185 PF00672 HAMP domain EPB53_RS14185 PF02743 Cache domain EPB53_RS14185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB53_RS14190 PF00704 Glycosyl hydrolases family 18 EPB53_RS14190 PF08329 Chitinase A, N-terminal domain EPB53_RS14195 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) EPB53_RS14200 PF00939 Sodium:sulfate symporter transmembrane region EPB53_RS14210 PF00128 Alpha amylase, catalytic domain EPB53_RS14210 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EPB53_RS14210 PF02806 Alpha amylase, C-terminal all-beta domain EPB53_RS14215 PF02446 4-alpha-glucanotransferase EPB53_RS14220 PF00343 Carbohydrate phosphorylase EPB53_RS14225 PF00196 Bacterial regulatory proteins, luxR family EPB53_RS14225 PF17874 MalT-like TPR region EPB53_RS14230 PF10928 Protein of unknown function (DUF2810) EPB53_RS14235 PF17200 Single Cache domain 2 EPB53_RS14235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB53_RS14235 PF00672 HAMP domain EPB53_RS14240 PF00990 Diguanylate cyclase, GGDEF domain EPB53_RS14240 PF00072 Response regulator receiver domain EPB53_RS14255 PF04244 Deoxyribodipyrimidine photo-lyase-related protein EPB53_RS14260 PF02743 Cache domain EPB53_RS14260 PF00672 HAMP domain EPB53_RS14260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB53_RS14265 PF10518 TAT (twin-arginine translocation) pathway signal sequence EPB53_RS14265 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding EPB53_RS14265 PF07992 Pyridine nucleotide-disulphide oxidoreductase EPB53_RS14270 PF05127 Helicase EPB53_RS14270 PF13718 GNAT acetyltransferase 2 EPB53_RS14275 PF13416 Bacterial extracellular solute-binding protein EPB53_RS14285 PF18607 ParA helix turn helix domain EPB53_RS14285 PF13614 AAA domain EPB53_RS14305 PF01709 Transcriptional regulator EPB53_RS14310 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EPB53_RS14310 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EPB53_RS14325 PF01243 Pyridoxamine 5'-phosphate oxidase EPB53_RS14325 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region EPB53_RS14340 PF12833 Helix-turn-helix domain EPB53_RS14345 PF18327 Proline utilization A proline dehydrogenase N-terminal domain EPB53_RS14345 PF14850 DNA-binding domain of Proline dehydrogenase EPB53_RS14345 PF01619 Proline dehydrogenase EPB53_RS14345 PF00171 Aldehyde dehydrogenase family EPB53_RS14360 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase EPB53_RS14365 PF00271 Helicase conserved C-terminal domain EPB53_RS14365 PF00270 DEAD/DEAH box helicase EPB53_RS14375 PF00672 HAMP domain EPB53_RS14375 PF17200 Single Cache domain 2 EPB53_RS14375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB53_RS14380 PF03466 LysR substrate binding domain EPB53_RS14380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB53_RS14385 PF13460 NAD(P)H-binding EPB53_RS14385 PF11066 Protein of unknown function (DUF2867) EPB53_RS14395 PF00893 Small Multidrug Resistance protein EPB53_RS14405 PF04393 Protein of unknown function (DUF535) EPB53_RS14410 PF09905 DNA-binding protein VF530 EPB53_RS14415 PF06779 Uncharacterised MFS-type transporter YbfB EPB53_RS14425 PF10437 Bacterial lipoate protein ligase C-terminus EPB53_RS14425 PF03099 Biotin/lipoate A/B protein ligase family EPB53_RS14430 PF00072 Response regulator receiver domain EPB53_RS14430 PF00486 Transcriptional regulatory protein, C terminal EPB53_RS14435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB53_RS14435 PF00512 His Kinase A (phospho-acceptor) domain EPB53_RS14445 PF07885 Ion channel EPB53_RS14450 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EPB53_RS14455 PF05068 Mannitol repressor EPB53_RS14460 PF08125 Mannitol dehydrogenase C-terminal domain EPB53_RS14460 PF01232 Mannitol dehydrogenase Rossmann domain EPB53_RS14465 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EPB53_RS14465 PF02378 Phosphotransferase system, EIIC EPB53_RS14465 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EPB53_RS14470 PF04225 Opacity-associated protein A LysM-like domain EPB53_RS14470 PF01551 Peptidase family M23 EPB53_RS14480 PF00849 RNA pseudouridylate synthase EPB53_RS14485 PF01810 LysE type translocator EPB53_RS14490 PF01037 Lrp/AsnC ligand binding domain EPB53_RS14500 PF05025 RbsD / FucU transport protein family EPB53_RS14505 PF00005 ABC transporter EPB53_RS14510 PF02653 Branched-chain amino acid transport system / permease component EPB53_RS14515 PF13407 Periplasmic binding protein domain EPB53_RS14520 PF00294 pfkB family carbohydrate kinase EPB53_RS14525 PF00356 Bacterial regulatory proteins, lacI family EPB53_RS14530 PF03009 Glycerophosphoryl diester phosphodiesterase family EPB53_RS14535 PF07690 Major Facilitator Superfamily EPB53_RS14550 PF03466 LysR substrate binding domain EPB53_RS14550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB53_RS14555 PF00709 Adenylosuccinate synthetase EPB53_RS14560 PF12843 Putative quorum-sensing-regulated virulence factor EPB53_RS14565 PF00990 Diguanylate cyclase, GGDEF domain EPB53_RS14575 PF02661 Fic/DOC family EPB53_RS14580 PF00455 DeoR C terminal sensor domain EPB53_RS14580 PF08220 DeoR-like helix-turn-helix domain EPB53_RS14585 PF08013 Tagatose 6 phosphate kinase EPB53_RS14590 PF01380 SIS domain EPB53_RS14600 PF03609 PTS system sorbose-specific iic component EPB53_RS14605 PF03613 PTS system mannose/fructose/sorbose family IID component EPB53_RS14610 PF03610 PTS system fructose IIA component EPB53_RS14625 PF13802 Galactose mutarotase-like EPB53_RS14625 PF01055 Glycosyl hydrolases family 31 EPB53_RS14630 PF02677 Epoxyqueuosine reductase QueH EPB53_RS14640 PF00270 DEAD/DEAH box helicase EPB53_RS14640 PF00271 Helicase conserved C-terminal domain EPB53_RS14655 PF01773 Na+ dependent nucleoside transporter N-terminus EPB53_RS14655 PF07670 Nucleoside recognition EPB53_RS14655 PF07662 Na+ dependent nucleoside transporter C-terminus EPB53_RS14660 PF04958 Arginine N-succinyltransferase beta subunit EPB53_RS14665 PF04996 Succinylarginine dihydrolase EPB53_RS14695 PF01882 Protein of unknown function DUF58 EPB53_RS14705 PF02743 Cache domain EPB53_RS14705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB53_RS14705 PF00672 HAMP domain EPB53_RS14710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB53_RS14710 PF00672 HAMP domain EPB53_RS14710 PF02743 Cache domain EPB53_RS14720 PF00128 Alpha amylase, catalytic domain EPB53_RS14725 PF07687 Peptidase dimerisation domain EPB53_RS14725 PF01546 Peptidase family M20/M25/M40 EPB53_RS14735 PF01590 GAF domain EPB53_RS14735 PF00158 Sigma-54 interaction domain EPB53_RS14740 PF00042 Globin EPB53_RS14740 PF00970 Oxidoreductase FAD-binding domain EPB53_RS14740 PF00175 Oxidoreductase NAD-binding domain EPB53_RS14745 PF00313 'Cold-shock' DNA-binding domain EPB53_RS14755 PF01339 CheB methylesterase EPB53_RS14755 PF00072 Response regulator receiver domain EPB53_RS14765 PF03853 YjeF-related protein N-terminus EPB53_RS14765 PF01256 Carbohydrate kinase EPB53_RS14770 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EPB53_RS14770 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EPB53_RS14775 PF00478 IMP dehydrogenase / GMP reductase domain EPB53_RS14780 PF02689 Helicase EPB53_RS14780 PF05970 PIF1-like helicase EPB53_RS14800 PF11806 Domain of unknown function (DUF3327) EPB53_RS14800 PF00756 Putative esterase EPB53_RS14815 PF00005 ABC transporter EPB53_RS14820 PF01032 FecCD transport family EPB53_RS14835 PF01497 Periplasmic binding protein EPB53_RS14840 PF00857 Isochorismatase family EPB53_RS14840 PF00550 Phosphopantetheine attachment site EPB53_RS14845 PF00501 AMP-binding enzyme EPB53_RS14845 PF13193 AMP-binding enzyme C-terminal domain EPB53_RS14850 PF00425 chorismate binding enzyme EPB53_RS14860 PF00793 DAHP synthetase I family EPB53_RS14865 PF01648 4'-phosphopantetheinyl transferase superfamily EPB53_RS14865 PF17837 4'-phosphopantetheinyl transferase N-terminal domain EPB53_RS14870 PF02668 Taurine catabolism dioxygenase TauD, TfdA family EPB53_RS14875 PF01494 FAD binding domain EPB53_RS14900 PF03466 LysR substrate binding domain EPB53_RS14900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB53_RS14910 PF09905 DNA-binding protein VF530 EPB53_RS14915 PF01156 Inosine-uridine preferring nucleoside hydrolase EPB53_RS14930 PF04973 Nicotinamide mononucleotide transporter EPB53_RS14940 PF00593 TonB dependent receptor EPB53_RS14940 PF07715 TonB-dependent Receptor Plug Domain EPB53_RS14945 PF03544 Gram-negative bacterial TonB protein C-terminal EPB53_RS14950 PF01618 MotA/TolQ/ExbB proton channel family EPB53_RS14955 PF02472 Biopolymer transport protein ExbD/TolR EPB53_RS14965 PF07690 Major Facilitator Superfamily EPB53_RS14970 PF00581 Rhodanese-like domain EPB53_RS14970 PF17773 UPF0176 acylphosphatase like domain EPB53_RS14975 PF07681 DoxX EPB53_RS14985 PF00579 tRNA synthetases class I (W and Y) EPB53_RS14985 PF01479 S4 domain EPB53_RS14995 PF00581 Rhodanese-like domain EPB53_RS15005 PF00196 Bacterial regulatory proteins, luxR family EPB53_RS15005 PF00563 EAL domain EPB53_RS15015 PF13419 Haloacid dehalogenase-like hydrolase EPB53_RS15025 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase EPB53_RS15040 PF03466 LysR substrate binding domain EPB53_RS15040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB53_RS15050 PF00271 Helicase conserved C-terminal domain EPB53_RS15050 PF00270 DEAD/DEAH box helicase EPB53_RS15055 PF07670 Nucleoside recognition EPB53_RS15070 PF01551 Peptidase family M23 EPB53_RS15070 PF08525 Opacity-associated protein A N-terminal motif EPB53_RS15070 PF01476 LysM domain EPB53_RS15075 PF08448 PAS fold EPB53_RS15075 PF08447 PAS fold EPB53_RS15075 PF00990 Diguanylate cyclase, GGDEF domain EPB53_RS15075 PF00563 EAL domain EPB53_RS15095 PF01557 Fumarylacetoacetate (FAA) hydrolase family EPB53_RS15100 PF01810 LysE type translocator EPB53_RS15105 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EPB53_RS15105 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EPB53_RS15105 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EPB53_RS15105 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EPB53_RS15110 PF00793 DAHP synthetase I family EPB53_RS15120 PF01070 FMN-dependent dehydrogenase EPB53_RS15130 PF03466 LysR substrate binding domain EPB53_RS15130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB53_RS15140 PF05362 Lon protease (S16) C-terminal proteolytic domain EPB53_RS15140 PF13654 AAA domain EPB53_RS15150 PF06865 Pyrimidine/purine nucleoside phosphorylase EPB53_RS15155 PF05726 Pirin C-terminal cupin domain EPB53_RS15155 PF02678 Pirin EPB53_RS15170 PF01274 Malate synthase EPB53_RS15180 PF01584 CheW-like domain EPB53_RS15180 PF00072 Response regulator receiver domain EPB53_RS15190 PF03922 OmpW family EPB53_RS15195 PF12262 Bacterial virulence factor lipase N-terminal EPB53_RS15200 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) EPB53_RS15205 PF00128 Alpha amylase, catalytic domain EPB53_RS15215 PF00248 Aldo/keto reductase family EPB53_RS15220 PF03605 Anaerobic c4-dicarboxylate membrane transporter EPB53_RS15225 PF02540 NAD synthase EPB53_RS15230 PF01467 Cytidylyltransferase-like EPB53_RS15250 PF01497 Periplasmic binding protein EPB53_RS15255 PF01032 FecCD transport family EPB53_RS15260 PF01032 FecCD transport family EPB53_RS15265 PF00005 ABC transporter EPB53_RS15270 PF00871 Acetokinase family EPB53_RS15275 PF00474 Sodium:solute symporter family EPB53_RS15290 PF00313 'Cold-shock' DNA-binding domain EPB53_RS15295 PF02798 Glutathione S-transferase, N-terminal domain EPB53_RS15310 PF00872 Transposase, Mutator family EPB53_RS15320 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EPB53_RS15325 PF02566 OsmC-like protein EPB53_RS15330 PF00892 EamA-like transporter family EPB53_RS15350 PF13193 AMP-binding enzyme C-terminal domain EPB53_RS15350 PF00501 AMP-binding enzyme EPB53_RS15355 PF00351 Biopterin-dependent aromatic amino acid hydroxylase EPB53_RS15360 PF01329 Pterin 4 alpha carbinolamine dehydratase EPB53_RS15365 PF00583 Acetyltransferase (GNAT) family EPB53_RS15370 PF00202 Aminotransferase class-III EPB53_RS15375 PF06339 Ectoine synthase EPB53_RS15380 PF00696 Amino acid kinase family EPB53_RS15380 PF13840 ACT domain EPB53_RS15405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EPB53_RS15405 PF00005 ABC transporter EPB53_RS15430 PF01575 MaoC like domain EPB53_RS15435 PF08206 Ribonuclease B OB domain EPB53_RS15435 PF00575 S1 RNA binding domain EPB53_RS15435 PF00773 RNB domain EPB53_RS15450 PF03129 Anticodon binding domain EPB53_RS15450 PF02824 TGS domain EPB53_RS15450 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EPB53_RS15450 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EPB53_RS15455 PF00707 Translation initiation factor IF-3, C-terminal domain EPB53_RS15455 PF05198 Translation initiation factor IF-3, N-terminal domain EPB53_RS15460 PF01632 Ribosomal protein L35 EPB53_RS15465 PF00453 Ribosomal protein L20 EPB53_RS15475 PF01609 Transposase DDE domain EPB53_RS15475 PF13808 DDE_Tnp_1-associated EPB53_RS15480 PF13808 DDE_Tnp_1-associated EPB53_RS15480 PF01609 Transposase DDE domain EPB53_RS15505 PF13808 DDE_Tnp_1-associated EPB53_RS15505 PF01609 Transposase DDE domain EPB53_RS15545 PF01177 Asp/Glu/Hydantoin racemase EPB53_RS15550 PF01609 Transposase DDE domain EPB53_RS15550 PF13808 DDE_Tnp_1-associated EPB53_RS15555 PF13808 DDE_Tnp_1-associated EPB53_RS15555 PF01609 Transposase DDE domain EPB53_RS15580 PF13808 DDE_Tnp_1-associated EPB53_RS15580 PF01609 Transposase DDE domain EPB53_RS15660 PF01327 Polypeptide deformylase EPB53_RS15770 PF13808 DDE_Tnp_1-associated EPB53_RS15770 PF01609 Transposase DDE domain EPB53_RS15800 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system EPB53_RS15805 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system EPB53_RS15895 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ EPB53_RS15910 PF12464 Maltose acetyltransferase EPB53_RS15910 PF14602 Hexapeptide repeat of succinyl-transferase EPB53_RS15940 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EPB53_RS15970 PF13673 Acetyltransferase (GNAT) domain EPB53_RS15985 PF05016 ParE toxin of type II toxin-antitoxin system, parDE EPB53_RS16005 PF00589 Phage integrase family EPB53_RS16025 PF05840 Bacteriophage replication gene A protein (GPA) EPB53_RS16035 PF00872 Transposase, Mutator family EPB53_RS16055 PF01872 RibD C-terminal domain EPB53_RS16080 PF02567 Phenazine biosynthesis-like protein EPB53_RS16135 PF05016 ParE toxin of type II toxin-antitoxin system, parDE EPB53_RS16165 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EPB53_RS16190 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ EPB53_RS16265 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ EPB53_RS16315 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus EPB53_RS16315 PF05175 Methyltransferase small domain EPB53_RS16335 PF13808 DDE_Tnp_1-associated EPB53_RS16335 PF01609 Transposase DDE domain EPB53_RS16345 PF08378 Nuclease-related domain EPB53_RS16370 PF01327 Polypeptide deformylase EPB53_RS16450 PF00561 alpha/beta hydrolase fold EPB53_RS16475 PF01609 Transposase DDE domain EPB53_RS16475 PF13808 DDE_Tnp_1-associated EPB53_RS16515 PF00132 Bacterial transferase hexapeptide (six repeats) EPB53_RS16535 PF00872 Transposase, Mutator family EPB53_RS16560 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ EPB53_RS16580 PF13808 DDE_Tnp_1-associated EPB53_RS16580 PF01609 Transposase DDE domain EPB53_RS16590 PF02810 SEC-C motif EPB53_RS16590 PF07517 SecA DEAD-like domain EPB53_RS16590 PF07516 SecA Wing and Scaffold domain EPB53_RS16590 PF01043 SecA preprotein cross-linking domain EPB53_RS16595 PF00563 EAL domain EPB53_RS16595 PF03707 Bacterial signalling protein N terminal repeat EPB53_RS16595 PF00990 Diguanylate cyclase, GGDEF domain EPB53_RS16600 PF00990 Diguanylate cyclase, GGDEF domain EPB53_RS16615 PF05222 Alanine dehydrogenase/PNT, N-terminal domain EPB53_RS16615 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch EPB53_RS16615 PF01262 Alanine dehydrogenase/PNT, C-terminal domain EPB53_RS16620 PF02233 NAD(P) transhydrogenase beta subunit EPB53_RS16630 PF00072 Response regulator receiver domain EPB53_RS16630 PF00486 Transcriptional regulatory protein, C terminal EPB53_RS16645 PF03701 Uncharacterised protein family (UPF0181) EPB53_RS16650 PF01053 Cys/Met metabolism PLP-dependent enzyme EPB53_RS16655 PF01253 Translation initiation factor SUI1 EPB53_RS16670 PF07478 D-ala D-ala ligase C-terminus EPB53_RS16670 PF01820 D-ala D-ala ligase N-terminus EPB53_RS16680 PF00583 Acetyltransferase (GNAT) family EPB53_RS16680 PF13380 CoA binding domain EPB53_RS16680 PF13607 Succinyl-CoA ligase like flavodoxin domain EPB53_RS16685 PF03466 LysR substrate binding domain EPB53_RS16685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB53_RS16690 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EPB53_RS16690 PF12793 Sugar transport-related sRNA regulator N-term EPB53_RS16700 PF03061 Thioesterase superfamily EPB53_RS16710 PF03831 PhnA domain EPB53_RS16710 PF08274 PhnA Zinc-Ribbon EPB53_RS16720 PF03741 Integral membrane protein TerC family EPB53_RS16730 PF11398 Protein of unknown function (DUF2813) EPB53_RS16735 PF06496 Protein of unknown function (DUF1097) EPB53_RS16745 PF01226 Formate/nitrite transporter EPB53_RS16750 PF04264 YceI-like domain EPB53_RS16755 PF01292 Prokaryotic cytochrome b561 EPB53_RS16765 PF00571 CBS domain EPB53_RS16780 PF04055 Radical SAM superfamily EPB53_RS16785 PF11230 Protein of unknown function (DUF3029) EPB53_RS16790 PF00842 Alanine racemase, C-terminal domain EPB53_RS16790 PF01168 Alanine racemase, N-terminal domain EPB53_RS16795 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EPB53_RS16795 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EPB53_RS16805 PF00465 Iron-containing alcohol dehydrogenase EPB53_RS16815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB53_RS16815 PF00672 HAMP domain EPB53_RS16825 PF01261 Xylose isomerase-like TIM barrel EPB53_RS16830 PF00294 pfkB family carbohydrate kinase EPB53_RS16835 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EPB53_RS16835 PF00205 Thiamine pyrophosphate enzyme, central domain EPB53_RS16835 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EPB53_RS16840 PF04962 KduI/IolB family EPB53_RS16850 PF07733 Bacterial DNA polymerase III alpha NTPase domain EPB53_RS16850 PF14579 Helix-hairpin-helix motif EPB53_RS16850 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EPB53_RS16850 PF00929 Exonuclease EPB53_RS16850 PF02811 PHP domain EPB53_RS16855 PF01380 SIS domain EPB53_RS16855 PF00571 CBS domain EPB53_RS16860 PF00474 Sodium:solute symporter family EPB53_RS16865 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EPB53_RS16865 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EPB53_RS16875 PF02653 Branched-chain amino acid transport system / permease component EPB53_RS16880 PF02653 Branched-chain amino acid transport system / permease component EPB53_RS16885 PF00005 ABC transporter EPB53_RS16895 PF00005 ABC transporter EPB53_RS16895 PF12848 ABC transporter EPB53_RS16900 PF00072 Response regulator receiver domain EPB53_RS16900 PF12431 Transcriptional regulator EPB53_RS16905 PF17203 Single cache domain 3 EPB53_RS16905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB53_RS16910 PF01970 Tripartite tricarboxylate transporter TctA family EPB53_RS16920 PF03401 Tripartite tricarboxylate transporter family receptor EPB53_RS16925 PF08220 DeoR-like helix-turn-helix domain EPB53_RS16925 PF00455 DeoR C terminal sensor domain EPB53_RS16930 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EPB53_RS16930 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EPB53_RS16935 PF07005 Sugar-binding N-terminal domain EPB53_RS16935 PF17042 Nucleotide-binding C-terminal domain EPB53_RS16940 PF00596 Class II Aldolase and Adducin N-terminal domain EPB53_RS16945 PF01261 Xylose isomerase-like TIM barrel EPB53_RS16950 PF01370 NAD dependent epimerase/dehydratase family EPB53_RS16955 PF02447 GntP family permease EPB53_RS16960 PF00005 ABC transporter EPB53_RS16965 PF01032 FecCD transport family EPB53_RS16975 PF01926 50S ribosome-binding GTPase EPB53_RS16995 PF00005 ABC transporter EPB53_RS16995 PF02687 FtsX-like permease family EPB53_RS16995 PF12704 MacB-like periplasmic core domain EPB53_RS17000 PF00005 ABC transporter EPB53_RS17000 PF12704 MacB-like periplasmic core domain EPB53_RS17000 PF02687 FtsX-like permease family EPB53_RS17010 PF00654 Voltage gated chloride channel EPB53_RS17030 PF00563 EAL domain EPB53_RS17030 PF00990 Diguanylate cyclase, GGDEF domain EPB53_RS17030 PF03707 Bacterial signalling protein N terminal repeat EPB53_RS17045 PF05154 TM2 domain EPB53_RS17070 PF00392 Bacterial regulatory proteins, gntR family EPB53_RS17070 PF07702 UTRA domain EPB53_RS17075 PF14760 Rnk N-terminus EPB53_RS17075 PF01272 Transcription elongation factor, GreA/GreB, C-term EPB53_RS17080 PF13419 Haloacid dehalogenase-like hydrolase EPB53_RS17090 PF00155 Aminotransferase class I and II EPB53_RS17095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB53_RS17095 PF00072 Response regulator receiver domain EPB53_RS17100 PF13476 AAA domain EPB53_RS17105 PF12320 Type 5 capsule protein repressor C-terminal domain EPB53_RS17105 PF00149 Calcineurin-like phosphoesterase EPB53_RS17110 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family EPB53_RS17110 PF00356 Bacterial regulatory proteins, lacI family EPB53_RS17115 PF00381 PTS HPr component phosphorylation site EPB53_RS17115 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EPB53_RS17120 PF00294 pfkB family carbohydrate kinase EPB53_RS17125 PF02378 Phosphotransferase system, EIIC EPB53_RS17125 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EPB53_RS17135 PF00155 Aminotransferase class I and II EPB53_RS17145 PF03477 ATP cone domain EPB53_RS17145 PF13597 Anaerobic ribonucleoside-triphosphate reductase EPB53_RS17160 PF04143 Sulphur transport EPB53_RS17165 PF01022 Bacterial regulatory protein, arsR family EPB53_RS17170 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EPB53_RS17170 PF07992 Pyridine nucleotide-disulphide oxidoreductase EPB53_RS17180 PF16875 Glycosyl hydrolase family 36 N-terminal domain EPB53_RS17180 PF16874 Glycosyl hydrolase family 36 C-terminal domain EPB53_RS17210 PF00356 Bacterial regulatory proteins, lacI family EPB53_RS17215 PF01263 Aldose 1-epimerase EPB53_RS17230 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain EPB53_RS17230 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain EPB53_RS17235 PF16363 GDP-mannose 4,6 dehydratase EPB53_RS17250 PF00089 Trypsin EPB53_RS17255 PF10417 C-terminal domain of 1-Cys peroxiredoxin EPB53_RS17255 PF00578 AhpC/TSA family EPB53_RS17280 PF06942 GlpM protein EPB53_RS17295 PF08534 Redoxin EPB53_RS17295 PF00462 Glutaredoxin EPB53_RS17315 PF12592 Protein of unknown function (DUF3763) EPB53_RS17315 PF07728 AAA domain (dynein-related subfamily) EPB53_RS17315 PF17868 AAA lid domain EPB53_RS17330 PF00271 Helicase conserved C-terminal domain EPB53_RS17330 PF00270 DEAD/DEAH box helicase EPB53_RS17335 PF03222 Tryptophan/tyrosine permease family EPB53_RS17340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB53_RS17345 PF16363 GDP-mannose 4,6 dehydratase EPB53_RS17350 PF03746 LamB/YcsF family EPB53_RS17365 PF00005 ABC transporter EPB53_RS17370 PF13472 GDSL-like Lipase/Acylhydrolase family EPB53_RS17375 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase EPB53_RS17375 PF12241 Trans-2-enoyl-CoA reductase catalytic region EPB53_RS17375 PF07055 Enoyl reductase FAD binding domain EPB53_RS17395 PF13419 Haloacid dehalogenase-like hydrolase EPB53_RS17415 PF04851 Type III restriction enzyme, res subunit EPB53_RS17415 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) EPB53_RS17415 PF08463 EcoEI R protein C-terminal EPB53_RS17415 PF00271 Helicase conserved C-terminal domain EPB53_RS17430 PF02384 N-6 DNA Methylase EPB53_RS17430 PF12161 HsdM N-terminal domain EPB53_RS17435 PF01420 Type I restriction modification DNA specificity domain EPB53_RS17455 PF00563 EAL domain EPB53_RS17455 PF00990 Diguanylate cyclase, GGDEF domain EPB53_RS17455 PF03707 Bacterial signalling protein N terminal repeat EPB53_RS17465 PF01571 Aminomethyltransferase folate-binding domain EPB53_RS17465 PF08669 Glycine cleavage T-protein C-terminal barrel domain EPB53_RS17475 PF01597 Glycine cleavage H-protein EPB53_RS17480 PF02347 Glycine cleavage system P-protein EPB53_RS17490 PF00313 'Cold-shock' DNA-binding domain EPB53_RS17495 PF01268 Formate--tetrahydrofolate ligase EPB53_RS17500 PF01625 Peptide methionine sulfoxide reductase EPB53_RS17500 PF01641 SelR domain EPB53_RS17510 PF03453 MoeA N-terminal region (domain I and II) EPB53_RS17510 PF00994 Probable molybdopterin binding domain EPB53_RS17510 PF03454 MoeA C-terminal region (domain IV) EPB53_RS17515 PF00899 ThiF family EPB53_RS17520 PF00581 Rhodanese-like domain EPB53_RS17530 PF00923 Transaldolase/Fructose-6-phosphate aldolase EPB53_RS17535 PF00456 Transketolase, thiamine diphosphate binding domain EPB53_RS17535 PF02780 Transketolase, C-terminal domain EPB53_RS17535 PF02779 Transketolase, pyrimidine binding domain EPB53_RS17545 PF08447 PAS fold EPB53_RS17545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB53_RS17550 PF00691 OmpA family EPB53_RS17550 PF05736 OprF membrane domain EPB53_RS17560 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase EPB53_RS17560 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EPB53_RS17565 PF13419 Haloacid dehalogenase-like hydrolase EPB53_RS17575 PF03606 C4-dicarboxylate anaerobic carrier EPB53_RS17600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB53_RS17600 PF17200 Single Cache domain 2 EPB53_RS17600 PF00672 HAMP domain EPB53_RS17605 PF01053 Cys/Met metabolism PLP-dependent enzyme EPB53_RS17620 PF00158 Sigma-54 interaction domain EPB53_RS17620 PF01590 GAF domain EPB53_RS17625 PF07549 SecD/SecF GG Motif EPB53_RS17625 PF02355 Protein export membrane protein EPB53_RS17630 PF07549 SecD/SecF GG Motif EPB53_RS17630 PF02355 Protein export membrane protein EPB53_RS17630 PF13721 SecD export protein N-terminal TM region EPB53_RS17645 PF00990 Diguanylate cyclase, GGDEF domain EPB53_RS17655 PF00704 Glycosyl hydrolases family 18 EPB53_RS17655 PF06483 Chitinase C EPB53_RS17660 PF06719 AraC-type transcriptional regulator N-terminus EPB53_RS17660 PF12833 Helix-turn-helix domain EPB53_RS17665 PF00465 Iron-containing alcohol dehydrogenase EPB53_RS17680 PF02142 MGS-like domain EPB53_RS17685 PF00857 Isochorismatase family EPB53_RS17690 PF13361 UvrD-like helicase C-terminal domain EPB53_RS17690 PF00580 UvrD/REP helicase N-terminal domain EPB53_RS17690 PF12462 DNA helicase IV / RNA helicase N terminal EPB53_RS17715 PF00528 Binding-protein-dependent transport system inner membrane component EPB53_RS17735 PF13407 Periplasmic binding protein domain EPB53_RS17740 PF01541 GIY-YIG catalytic domain EPB53_RS17755 PF04363 Protein of unknown function (DUF496) EPB53_RS17765 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EPB53_RS17765 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EPB53_RS17770 PF00230 Major intrinsic protein EPB53_RS17780 PF00890 FAD binding domain EPB53_RS17785 PF13183 4Fe-4S dicluster domain EPB53_RS17785 PF02754 Cysteine-rich domain EPB53_RS17790 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EPB53_RS17790 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EPB53_RS17795 PF00085 Thioredoxin EPB53_RS17800 PF07690 Major Facilitator Superfamily EPB53_RS17815 PF02028 BCCT, betaine/carnitine/choline family transporter