locus-tag class description AL543_RS00010 PF00884 Sulfatase AL543_RS00015 PF03466 LysR substrate binding domain AL543_RS00015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL543_RS00020 PF07690 Major Facilitator Superfamily AL543_RS00025 PF01717 Cobalamin-independent synthase, Catalytic domain AL543_RS00025 PF08267 Cobalamin-independent synthase, N-terminal domain AL543_RS00035 PF13358 DDE superfamily endonuclease AL543_RS00045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL543_RS00045 PF00672 HAMP domain AL543_RS00045 PF02743 Cache domain AL543_RS00055 PF13358 DDE superfamily endonuclease AL543_RS00070 PF01551 Peptidase family M23 AL543_RS00075 PF05638 Type VI secretion system effector, Hcp AL543_RS00085 PF08220 DeoR-like helix-turn-helix domain AL543_RS00085 PF00455 DeoR C terminal sensor domain AL543_RS00090 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AL543_RS00090 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AL543_RS00095 PF07005 Sugar-binding N-terminal domain AL543_RS00095 PF17042 Nucleotide-binding C-terminal domain AL543_RS00100 PF00596 Class II Aldolase and Adducin N-terminal domain AL543_RS00105 PF01261 Xylose isomerase-like TIM barrel AL543_RS00110 PF01370 NAD dependent epimerase/dehydratase family AL543_RS00115 PF02447 GntP family permease AL543_RS00220 PF00145 C-5 cytosine-specific DNA methylase AL543_RS00265 PF03354 Phage Terminase AL543_RS00280 PF00717 Peptidase S24-like AL543_RS00280 PF01381 Helix-turn-helix AL543_RS00310 PF00107 Zinc-binding dehydrogenase AL543_RS00310 PF08240 Alcohol dehydrogenase GroES-like domain AL543_RS00315 PF00155 Aminotransferase class I and II AL543_RS00320 PF01053 Cys/Met metabolism PLP-dependent enzyme AL543_RS00325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL543_RS00325 PF03466 LysR substrate binding domain AL543_RS00330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL543_RS00345 PF00990 Diguanylate cyclase, GGDEF domain AL543_RS00345 PF01590 GAF domain AL543_RS00345 PF00563 EAL domain AL543_RS00345 PF00360 Phytochrome region AL543_RS00350 PF00512 His Kinase A (phospho-acceptor) domain AL543_RS00350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL543_RS00350 PF00072 Response regulator receiver domain AL543_RS00350 PF01627 Hpt domain AL543_RS00350 PF00672 HAMP domain AL543_RS00350 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AL543_RS00365 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AL543_RS00365 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AL543_RS00370 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AL543_RS00375 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AL543_RS00375 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AL543_RS00395 PF02595 Glycerate kinase family AL543_RS00400 PF02447 GntP family permease AL543_RS00405 PF05651 Putative sugar diacid recognition AL543_RS00405 PF13556 PucR C-terminal helix-turn-helix domain AL543_RS00405 PF17853 GGDEF-like domain AL543_RS00410 PF03150 Di-haem cytochrome c peroxidase AL543_RS00410 PF00034 Cytochrome c AL543_RS00415 PF00672 HAMP domain AL543_RS00415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL543_RS00420 PF01243 Pyridoxamine 5'-phosphate oxidase AL543_RS00425 PF06228 Haem utilisation ChuX/HutX AL543_RS00430 PF04055 Radical SAM superfamily AL543_RS00435 PF03544 Gram-negative bacterial TonB protein C-terminal AL543_RS00440 PF01618 MotA/TolQ/ExbB proton channel family AL543_RS00445 PF02472 Biopolymer transport protein ExbD/TolR AL543_RS00450 PF01497 Periplasmic binding protein AL543_RS00455 PF01032 FecCD transport family AL543_RS00460 PF00005 ABC transporter AL543_RS00480 PF13358 DDE superfamily endonuclease AL543_RS00500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL543_RS00500 PF00672 HAMP domain AL543_RS00500 PF02743 Cache domain AL543_RS00505 PF03476 MOSC N-terminal beta barrel domain AL543_RS00505 PF00111 2Fe-2S iron-sulfur cluster binding domain AL543_RS00505 PF03473 MOSC domain AL543_RS00505 PF00111 2Fe-2S iron-sulfur cluster binding domain AL543_RS00505 PF03476 MOSC N-terminal beta barrel domain AL543_RS00505 PF03473 MOSC domain AL543_RS00510 PF01979 Amidohydrolase family AL543_RS00520 PF13358 DDE superfamily endonuclease AL543_RS00530 PF05656 Protein of unknown function (DUF805) AL543_RS00540 PF05958 tRNA (Uracil-5-)-methyltransferase AL543_RS00545 PF05661 Protein of unknown function (DUF808) AL543_RS00550 PF12848 ABC transporter AL543_RS00550 PF00005 ABC transporter AL543_RS00565 PF00313 'Cold-shock' DNA-binding domain AL543_RS00590 PF00990 Diguanylate cyclase, GGDEF domain AL543_RS00590 PF08448 PAS fold AL543_RS00595 PF08220 DeoR-like helix-turn-helix domain AL543_RS00595 PF00455 DeoR C terminal sensor domain AL543_RS00605 PF00149 Calcineurin-like phosphoesterase AL543_RS00605 PF02872 5'-nucleotidase, C-terminal domain AL543_RS00620 PF00528 Binding-protein-dependent transport system inner membrane component AL543_RS00625 PF14785 Maltose transport system permease protein MalF P2 domain AL543_RS00625 PF00528 Binding-protein-dependent transport system inner membrane component AL543_RS00630 PF01547 Bacterial extracellular solute-binding protein AL543_RS00635 PF08402 TOBE domain AL543_RS00635 PF00005 ABC transporter AL543_RS00640 PF13302 Acetyltransferase (GNAT) domain AL543_RS00655 PF01906 Putative heavy-metal-binding AL543_RS00660 PF00196 Bacterial regulatory proteins, luxR family AL543_RS00685 PF00072 Response regulator receiver domain AL543_RS00685 PF01584 CheW-like domain AL543_RS00690 PF01047 MarR family AL543_RS00695 PF00990 Diguanylate cyclase, GGDEF domain AL543_RS00710 PF00990 Diguanylate cyclase, GGDEF domain AL543_RS00710 PF00563 EAL domain AL543_RS00710 PF03707 Bacterial signalling protein N terminal repeat AL543_RS00730 PF03466 LysR substrate binding domain AL543_RS00730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL543_RS00735 PF00563 EAL domain AL543_RS00735 PF00990 Diguanylate cyclase, GGDEF domain AL543_RS00745 PF05726 Pirin C-terminal cupin domain AL543_RS00745 PF02678 Pirin AL543_RS00750 PF06865 Pyrimidine/purine nucleoside phosphorylase AL543_RS00760 PF07690 Major Facilitator Superfamily AL543_RS00770 PF12729 Four helix bundle sensory module for signal transduction AL543_RS00770 PF00672 HAMP domain AL543_RS00770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL543_RS00775 PF13654 AAA domain AL543_RS00775 PF05362 Lon protease (S16) C-terminal proteolytic domain AL543_RS00785 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL543_RS00785 PF00005 ABC transporter AL543_RS00790 PF03466 LysR substrate binding domain AL543_RS00790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL543_RS00795 PF02652 L-lactate permease AL543_RS00800 PF01070 FMN-dependent dehydrogenase AL543_RS00810 PF13006 Insertion element 4 transposase N-terminal AL543_RS00810 PF01609 Transposase DDE domain AL543_RS00815 PF03618 Kinase/pyrophosphorylase AL543_RS00820 PF00391 PEP-utilising enzyme, mobile domain AL543_RS00820 PF02896 PEP-utilising enzyme, TIM barrel domain AL543_RS00820 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AL543_RS00830 PF13581 Histidine kinase-like ATPase domain AL543_RS00840 PF01740 STAS domain AL543_RS00840 PF08678 Rsbr N terminal AL543_RS00845 PF01470 Pyroglutamyl peptidase AL543_RS00850 PF08447 PAS fold AL543_RS00850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL543_RS00855 PF01554 MatE AL543_RS00860 PF01797 Transposase IS200 like AL543_RS00865 PF00793 DAHP synthetase I family AL543_RS00870 PF00005 ABC transporter AL543_RS00875 PF00528 Binding-protein-dependent transport system inner membrane component AL543_RS00880 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL543_RS00885 PF00528 Binding-protein-dependent transport system inner membrane component AL543_RS00890 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AL543_RS00890 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AL543_RS00890 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AL543_RS00890 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AL543_RS00900 PF01551 Peptidase family M23 AL543_RS00900 PF04225 Opacity-associated protein A LysM-like domain AL543_RS00905 PF02378 Phosphotransferase system, EIIC AL543_RS00905 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AL543_RS00905 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AL543_RS00910 PF08125 Mannitol dehydrogenase C-terminal domain AL543_RS00910 PF01232 Mannitol dehydrogenase Rossmann domain AL543_RS00915 PF05068 Mannitol repressor AL543_RS00920 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AL543_RS00950 PF00892 EamA-like transporter family AL543_RS00955 PF01047 MarR family AL543_RS00965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL543_RS00965 PF03466 LysR substrate binding domain AL543_RS00970 PF03358 NADPH-dependent FMN reductase AL543_RS00980 PF08990 Erythronolide synthase docking AL543_RS00980 PF00698 Acyl transferase domain AL543_RS00980 PF08240 Alcohol dehydrogenase GroES-like domain AL543_RS00980 PF02801 Beta-ketoacyl synthase, C-terminal domain AL543_RS00980 PF00109 Beta-ketoacyl synthase, N-terminal domain AL543_RS00980 PF14765 Polyketide synthase dehydratase AL543_RS00980 PF16197 Ketoacyl-synthetase C-terminal extension AL543_RS00980 PF08659 KR domain AL543_RS00980 PF00550 Phosphopantetheine attachment site AL543_RS00985 PF00892 EamA-like transporter family AL543_RS00990 PF13460 NAD(P)H-binding AL543_RS00995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL543_RS00995 PF03466 LysR substrate binding domain AL543_RS01005 PF13358 DDE superfamily endonuclease AL543_RS01010 PF00106 short chain dehydrogenase AL543_RS01015 PF03466 LysR substrate binding domain AL543_RS01015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL543_RS01020 PF00579 tRNA synthetases class I (W and Y) AL543_RS01025 PF04013 Putative SAM-dependent RNA methyltransferase AL543_RS01035 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AL543_RS01040 PF13520 Amino acid permease AL543_RS01045 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AL543_RS01045 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AL543_RS01045 PF01276 Orn/Lys/Arg decarboxylase, major domain AL543_RS01055 PF03472 Autoinducer binding domain AL543_RS01055 PF00196 Bacterial regulatory proteins, luxR family AL543_RS01075 PF00171 Aldehyde dehydrogenase family AL543_RS01080 PF01037 Lrp/AsnC ligand binding domain AL543_RS01085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL543_RS01085 PF00672 HAMP domain AL543_RS01085 PF02743 Cache domain AL543_RS01095 PF00474 Sodium:solute symporter family AL543_RS01105 PF00171 Aldehyde dehydrogenase family AL543_RS01105 PF01619 Proline dehydrogenase AL543_RS01105 PF14850 DNA-binding domain of Proline dehydrogenase AL543_RS01105 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AL543_RS01110 PF12833 Helix-turn-helix domain AL543_RS01120 PF03781 Sulfatase-modifying factor enzyme 1 AL543_RS01125 PF00196 Bacterial regulatory proteins, luxR family AL543_RS01125 PF00072 Response regulator receiver domain AL543_RS01130 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AL543_RS01130 PF01243 Pyridoxamine 5'-phosphate oxidase AL543_RS01135 PF00529 HlyD membrane-fusion protein of T1SS AL543_RS01150 PF03412 Peptidase C39 family AL543_RS01150 PF00005 ABC transporter AL543_RS01150 PF00664 ABC transporter transmembrane region AL543_RS01160 PF17678 Glycosyl hydrolase family 92 N-terminal domain AL543_RS01160 PF07971 Glycosyl hydrolase family 92 AL543_RS01170 PF00990 Diguanylate cyclase, GGDEF domain AL543_RS01170 PF00072 Response regulator receiver domain AL543_RS01180 PF02743 Cache domain AL543_RS01180 PF00672 HAMP domain AL543_RS01180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL543_RS01185 PF01339 CheB methylesterase AL543_RS01185 PF00072 Response regulator receiver domain AL543_RS01190 PF03975 CheD chemotactic sensory transduction AL543_RS01200 PF00672 HAMP domain AL543_RS01200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL543_RS01200 PF02203 Tar ligand binding domain homologue AL543_RS01205 PF01584 CheW-like domain AL543_RS01210 PF01584 CheW-like domain AL543_RS01215 PF01584 CheW-like domain AL543_RS01215 PF01627 Hpt domain AL543_RS01215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL543_RS01215 PF02895 Signal transducing histidine kinase, homodimeric domain AL543_RS01215 PF09078 CheY binding AL543_RS01220 PF00072 Response regulator receiver domain AL543_RS01230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL543_RS01235 PF00528 Binding-protein-dependent transport system inner membrane component AL543_RS01240 PF12911 N-terminal TM domain of oligopeptide transport permease C AL543_RS01240 PF00528 Binding-protein-dependent transport system inner membrane component AL543_RS01245 PF00005 ABC transporter AL543_RS01245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL543_RS01250 PF08019 Phosphoethanolamine transferase EptA/EptB AL543_RS01250 PF00884 Sulfatase AL543_RS01255 PF01797 Transposase IS200 like AL543_RS01260 PF08521 Two-component sensor kinase N-terminal AL543_RS01260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL543_RS01260 PF00512 His Kinase A (phospho-acceptor) domain AL543_RS01265 PF00486 Transcriptional regulatory protein, C terminal AL543_RS01265 PF00072 Response regulator receiver domain AL543_RS01275 PF00106 short chain dehydrogenase AL543_RS01285 PF00501 AMP-binding enzyme AL543_RS01295 PF05127 Helicase AL543_RS01295 PF13718 GNAT acetyltransferase 2 AL543_RS01300 PF13416 Bacterial extracellular solute-binding protein AL543_RS01305 PF02195 ParB-like nuclease domain AL543_RS01305 PF08775 ParB family AL543_RS01310 PF18607 ParA helix turn helix domain AL543_RS01310 PF13614 AAA domain AL543_RS01340 PF01709 Transcriptional regulator AL543_RS01345 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AL543_RS01345 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AL543_RS01355 PF10928 Protein of unknown function (DUF2810) AL543_RS01360 PF00196 Bacterial regulatory proteins, luxR family AL543_RS01360 PF17874 MalT-like TPR region AL543_RS01365 PF00343 Carbohydrate phosphorylase AL543_RS01370 PF02446 4-alpha-glucanotransferase AL543_RS01375 PF00128 Alpha amylase, catalytic domain AL543_RS01375 PF02806 Alpha amylase, C-terminal all-beta domain AL543_RS01375 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AL543_RS01380 PF05638 Type VI secretion system effector, Hcp AL543_RS01385 PF04717 Type VI secretion system, phage-baseplate injector AL543_RS01410 PF00842 Alanine racemase, C-terminal domain AL543_RS01410 PF01168 Alanine racemase, N-terminal domain AL543_RS01410 PF01757 Acyltransferase family AL543_RS01420 PF00939 Sodium:sulfate symporter transmembrane region AL543_RS01425 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) AL543_RS01430 PF08329 Chitinase A, N-terminal domain AL543_RS01430 PF00704 Glycosyl hydrolases family 18 AL543_RS01455 PF01569 PAP2 superfamily AL543_RS01460 PF04389 Peptidase family M28 AL543_RS01460 PF02225 PA domain AL543_RS01465 PF00375 Sodium:dicarboxylate symporter family AL543_RS01470 PF04314 Copper chaperone PCu(A)C AL543_RS01475 PF02630 SCO1/SenC AL543_RS01490 PF03616 Sodium/glutamate symporter AL543_RS01495 PF12945 Flagellar protein YcgR AL543_RS01495 PF07238 PilZ domain AL543_RS01505 PF13443 Cro/C1-type HTH DNA-binding domain AL543_RS01520 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL543_RS01520 PF00529 HlyD membrane-fusion protein of T1SS AL543_RS01525 PF11742 Protein of unknown function (DUF3302) AL543_RS01530 PF00990 Diguanylate cyclase, GGDEF domain AL543_RS01545 PF01048 Phosphorylase superfamily AL543_RS01555 PF08349 Protein of unknown function (DUF1722) AL543_RS01560 PF13411 MerR HTH family regulatory protein AL543_RS01565 PF03441 FAD binding domain of DNA photolyase AL543_RS01565 PF00875 DNA photolyase AL543_RS01570 PF01476 LysM domain AL543_RS01570 PF17969 L,D-transpeptidase C-terminal domain AL543_RS01570 PF03734 L,D-transpeptidase catalytic domain AL543_RS01580 PF00270 DEAD/DEAH box helicase AL543_RS01580 PF00271 Helicase conserved C-terminal domain AL543_RS01585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL543_RS01585 PF00672 HAMP domain AL543_RS01585 PF12729 Four helix bundle sensory module for signal transduction AL543_RS01590 PF12849 PBP superfamily domain AL543_RS01595 PF00528 Binding-protein-dependent transport system inner membrane component AL543_RS01600 PF00528 Binding-protein-dependent transport system inner membrane component AL543_RS01605 PF00005 ABC transporter AL543_RS01610 PF03707 Bacterial signalling protein N terminal repeat AL543_RS01610 PF00990 Diguanylate cyclase, GGDEF domain AL543_RS01610 PF00563 EAL domain AL543_RS01620 PF07670 Nucleoside recognition AL543_RS01625 PF01740 STAS domain AL543_RS01625 PF00916 Sulfate permease family AL543_RS01635 PF01476 LysM domain AL543_RS01635 PF01551 Peptidase family M23 AL543_RS01635 PF08525 Opacity-associated protein A N-terminal motif AL543_RS01640 PF03707 Bacterial signalling protein N terminal repeat AL543_RS01640 PF00990 Diguanylate cyclase, GGDEF domain AL543_RS01640 PF00563 EAL domain AL543_RS01645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL543_RS01645 PF03466 LysR substrate binding domain AL543_RS01650 PF07690 Major Facilitator Superfamily AL543_RS01655 PF09278 MerR, DNA binding AL543_RS01655 PF00376 MerR family regulatory protein AL543_RS01660 PF13358 DDE superfamily endonuclease AL543_RS01670 PF13493 Domain of unknown function (DUF4118) AL543_RS01670 PF02702 Osmosensitive K+ channel His kinase sensor domain AL543_RS01670 PF00512 His Kinase A (phospho-acceptor) domain AL543_RS01670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL543_RS01675 PF01039 Carboxyl transferase domain AL543_RS01675 PF17848 Acetyl-coA carboxylase zinc finger domain AL543_RS01690 PF08534 Redoxin AL543_RS01690 PF00462 Glutaredoxin AL543_RS01695 PF00892 EamA-like transporter family AL543_RS01700 PF13609 Gram-negative porin AL543_RS01705 PF02566 OsmC-like protein AL543_RS01710 PF01047 MarR family AL543_RS01715 PF01557 Fumarylacetoacetate (FAA) hydrolase family AL543_RS01730 PF12833 Helix-turn-helix domain AL543_RS01735 PF01810 LysE type translocator AL543_RS01745 PF00005 ABC transporter AL543_RS01745 PF00664 ABC transporter transmembrane region AL543_RS01755 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AL543_RS01765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL543_RS01765 PF03466 LysR substrate binding domain AL543_RS01770 PF10688 Bacterial inner membrane protein AL543_RS01775 PF01081 KDPG and KHG aldolase AL543_RS01780 PF00294 pfkB family carbohydrate kinase AL543_RS01785 PF02614 Glucuronate isomerase AL543_RS01790 PF01232 Mannitol dehydrogenase Rossmann domain AL543_RS01790 PF08125 Mannitol dehydrogenase C-terminal domain AL543_RS01795 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AL543_RS01800 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AL543_RS01805 PF03480 Bacterial extracellular solute-binding protein, family 7 AL543_RS01810 PF00392 Bacterial regulatory proteins, gntR family AL543_RS01810 PF07729 FCD domain AL543_RS01815 PF03786 D-mannonate dehydratase (UxuA) AL543_RS01820 PF00271 Helicase conserved C-terminal domain AL543_RS01820 PF00270 DEAD/DEAH box helicase AL543_RS01835 PF12833 Helix-turn-helix domain AL543_RS01835 PF12852 Cupin AL543_RS01840 PF00462 Glutaredoxin AL543_RS01855 PF00672 HAMP domain AL543_RS01855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL543_RS01865 PF01797 Transposase IS200 like AL543_RS01870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL543_RS01870 PF00672 HAMP domain AL543_RS01880 PF01566 Natural resistance-associated macrophage protein AL543_RS01885 PF00128 Alpha amylase, catalytic domain AL543_RS01885 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AL543_RS01890 PF02264 LamB porin AL543_RS01895 PF07148 Maltose operon periplasmic protein precursor (MalM) AL543_RS01905 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AL543_RS01925 PF03466 LysR substrate binding domain AL543_RS01925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL543_RS01930 PF07681 DoxX AL543_RS01935 PF00730 HhH-GPD superfamily base excision DNA repair protein AL543_RS01935 PF06029 AlkA N-terminal domain AL543_RS01940 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AL543_RS01940 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AL543_RS01950 PF00939 Sodium:sulfate symporter transmembrane region AL543_RS01955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL543_RS01955 PF17203 Single cache domain 3 AL543_RS01960 PF12431 Transcriptional regulator AL543_RS01960 PF00072 Response regulator receiver domain AL543_RS01965 PF03600 Citrate transporter AL543_RS01970 PF07670 Nucleoside recognition AL543_RS01975 PF07670 Nucleoside recognition AL543_RS01980 PF00375 Sodium:dicarboxylate symporter family AL543_RS01995 PF02001 Protein of unknown function DUF134 AL543_RS02015 PF01447 Thermolysin metallopeptidase, catalytic domain AL543_RS02015 PF01483 Proprotein convertase P-domain AL543_RS02015 PF07504 Fungalysin/Thermolysin Propeptide Motif AL543_RS02015 PF02868 Thermolysin metallopeptidase, alpha-helical domain AL543_RS02025 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AL543_RS02025 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AL543_RS02030 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AL543_RS02030 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AL543_RS02035 PF00581 Rhodanese-like domain AL543_RS02040 PF00563 EAL domain AL543_RS02040 PF12792 CSS motif domain associated with EAL AL543_RS02045 PF13419 Haloacid dehalogenase-like hydrolase AL543_RS02050 PF01740 STAS domain AL543_RS02050 PF00916 Sulfate permease family AL543_RS02055 PF01797 Transposase IS200 like AL543_RS02060 PF00849 RNA pseudouridylate synthase AL543_RS02080 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath AL543_RS02090 PF05947 Type VI secretion system, TssF AL543_RS02110 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE AL543_RS02120 PF00004 ATPase family associated with various cellular activities (AAA) AL543_RS02120 PF07724 AAA domain (Cdc48 subfamily) AL543_RS02120 PF17871 AAA lid domain AL543_RS02120 PF10431 C-terminal, D2-small domain, of ClpB protein AL543_RS02125 PF02954 Bacterial regulatory protein, Fis family AL543_RS02125 PF00158 Sigma-54 interaction domain AL543_RS02140 PF06744 Type VI secretion protein IcmF C-terminal AL543_RS02140 PF14331 ImcF-related N-terminal domain AL543_RS02140 PF06761 Intracellular multiplication and human macrophage-killing AL543_RS02150 PF04717 Type VI secretion system, phage-baseplate injector AL543_RS02150 PF01471 Putative peptidoglycan binding domain AL543_RS02160 PF13358 DDE superfamily endonuclease AL543_RS02180 PF05025 RbsD / FucU transport protein family AL543_RS02185 PF00005 ABC transporter AL543_RS02190 PF02653 Branched-chain amino acid transport system / permease component AL543_RS02195 PF13407 Periplasmic binding protein domain AL543_RS02200 PF00294 pfkB family carbohydrate kinase AL543_RS02205 PF00356 Bacterial regulatory proteins, lacI family AL543_RS02210 PF04973 Nicotinamide mononucleotide transporter AL543_RS02215 PF01048 Phosphorylase superfamily AL543_RS02225 PF03009 Glycerophosphoryl diester phosphodiesterase family AL543_RS02230 PF07690 Major Facilitator Superfamily AL543_RS02245 PF00512 His Kinase A (phospho-acceptor) domain AL543_RS02245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL543_RS02245 PF02743 Cache domain AL543_RS02250 PF00158 Sigma-54 interaction domain AL543_RS02250 PF00072 Response regulator receiver domain AL543_RS02250 PF02954 Bacterial regulatory protein, Fis family AL543_RS02270 PF01266 FAD dependent oxidoreductase AL543_RS02275 PF12561 ToxR activated gene A lipoprotein domain AL543_RS02275 PF00041 Fibronectin type III domain AL543_RS02280 PF01327 Polypeptide deformylase AL543_RS02285 PF03611 PTS system sugar-specific permease component AL543_RS02295 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AL543_RS02300 PF00356 Bacterial regulatory proteins, lacI family AL543_RS02305 PF00175 Oxidoreductase NAD-binding domain AL543_RS02305 PF00970 Oxidoreductase FAD-binding domain AL543_RS02305 PF00042 Globin AL543_RS02315 PF03222 Tryptophan/tyrosine permease family AL543_RS02320 PF01212 Beta-eliminating lyase AL543_RS02330 PF12843 Putative quorum-sensing-regulated virulence factor AL543_RS02340 PF00563 EAL domain AL543_RS02340 PF00990 Diguanylate cyclase, GGDEF domain AL543_RS02340 PF08448 PAS fold AL543_RS02345 PF00313 'Cold-shock' DNA-binding domain AL543_RS02350 PF01797 Transposase IS200 like AL543_RS02360 PF13358 DDE superfamily endonuclease AL543_RS02365 PF01797 Transposase IS200 like AL543_RS02380 PF13519 von Willebrand factor type A domain AL543_RS02395 PF01882 Protein of unknown function DUF58 AL543_RS02400 PF07726 ATPase family associated with various cellular activities (AAA) AL543_RS02400 PF17863 AAA lid domain AL543_RS02420 PF07670 Nucleoside recognition AL543_RS02420 PF07662 Na+ dependent nucleoside transporter C-terminus AL543_RS02420 PF01773 Na+ dependent nucleoside transporter N-terminus AL543_RS02425 PF07687 Peptidase dimerisation domain AL543_RS02425 PF01546 Peptidase family M20/M25/M40 AL543_RS02435 PF00158 Sigma-54 interaction domain AL543_RS02435 PF01590 GAF domain AL543_RS02440 PF00970 Oxidoreductase FAD-binding domain AL543_RS02440 PF00042 Globin AL543_RS02440 PF00175 Oxidoreductase NAD-binding domain AL543_RS02445 PF00313 'Cold-shock' DNA-binding domain AL543_RS02450 PF03889 Alternative ribosome-rescue factor A AL543_RS02465 PF00072 Response regulator receiver domain AL543_RS02475 PF01256 Carbohydrate kinase AL543_RS02475 PF03853 YjeF-related protein N-terminus AL543_RS02480 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AL543_RS02480 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AL543_RS02490 PF07885 Ion channel AL543_RS02505 PF00478 IMP dehydrogenase / GMP reductase domain AL543_RS02510 PF02899 Phage integrase, N-terminal SAM-like domain AL543_RS02510 PF00589 Phage integrase family AL543_RS02515 PF07669 Eco57I restriction-modification methylase AL543_RS02580 PF05840 Bacteriophage replication gene A protein (GPA) AL543_RS02735 PF00478 IMP dehydrogenase / GMP reductase domain AL543_RS02740 PF00270 DEAD/DEAH box helicase AL543_RS02740 PF00271 Helicase conserved C-terminal domain AL543_RS02745 PF03605 Anaerobic c4-dicarboxylate membrane transporter AL543_RS02750 PF02540 NAD synthase AL543_RS02755 PF01467 Cytidylyltransferase-like AL543_RS02760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL543_RS02760 PF17200 Single Cache domain 2 AL543_RS02760 PF00672 HAMP domain AL543_RS02765 PF11849 Domain of unknown function (DUF3369) AL543_RS02770 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL543_RS02770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL543_RS02770 PF00512 His Kinase A (phospho-acceptor) domain AL543_RS02780 PF03553 Na+/H+ antiporter family AL543_RS02785 PF07690 Major Facilitator Superfamily AL543_RS02795 PF00990 Diguanylate cyclase, GGDEF domain AL543_RS02795 PF08448 PAS fold AL543_RS02800 PF00657 GDSL-like Lipase/Acylhydrolase AL543_RS02805 PF07968 Leukocidin/Hemolysin toxin family AL543_RS02805 PF16458 Beta-prism lectin AL543_RS02805 PF12563 Hemolytic toxin N terminal AL543_RS02810 PF12729 Four helix bundle sensory module for signal transduction AL543_RS02810 PF00672 HAMP domain AL543_RS02810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL543_RS02815 PF00801 PKD domain AL543_RS02815 PF05547 Immune inhibitor A peptidase M6 AL543_RS02835 PF01032 FecCD transport family AL543_RS02840 PF01032 FecCD transport family AL543_RS02845 PF00005 ABC transporter AL543_RS02850 PF12833 Helix-turn-helix domain AL543_RS02855 PF07715 TonB-dependent Receptor Plug Domain AL543_RS02855 PF00593 TonB dependent receptor AL543_RS02865 PF00871 Acetokinase family AL543_RS02875 PF01380 SIS domain AL543_RS02880 PF02378 Phosphotransferase system, EIIC AL543_RS02880 PF00367 phosphotransferase system, EIIB AL543_RS02885 PF01418 Helix-turn-helix domain, rpiR family AL543_RS02885 PF01380 SIS domain AL543_RS02890 PF02656 Domain of unknown function (DUF202) AL543_RS02905 PF01261 Xylose isomerase-like TIM barrel AL543_RS02910 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AL543_RS02920 PF00596 Class II Aldolase and Adducin N-terminal domain AL543_RS02925 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AL543_RS02930 PF03611 PTS system sugar-specific permease component AL543_RS02935 PF00455 DeoR C terminal sensor domain AL543_RS02935 PF08220 DeoR-like helix-turn-helix domain AL543_RS02945 PF13358 DDE superfamily endonuclease AL543_RS02955 PF13358 DDE superfamily endonuclease AL543_RS02960 PF05025 RbsD / FucU transport protein family AL543_RS02965 PF00596 Class II Aldolase and Adducin N-terminal domain AL543_RS02980 PF02653 Branched-chain amino acid transport system / permease component AL543_RS03025 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AL543_RS03025 PF18416 N-acetylglucosamine binding protein domain 2 AL543_RS03030 PF04244 Deoxyribodipyrimidine photo-lyase-related protein AL543_RS03035 PF01575 MaoC like domain AL543_RS03040 PF12849 PBP superfamily domain AL543_RS03050 PF08206 Ribonuclease B OB domain AL543_RS03050 PF00575 S1 RNA binding domain AL543_RS03050 PF00773 RNB domain AL543_RS03055 PF03880 DbpA RNA binding domain AL543_RS03055 PF00270 DEAD/DEAH box helicase AL543_RS03055 PF00271 Helicase conserved C-terminal domain AL543_RS03065 PF00884 Sulfatase AL543_RS03070 PF00294 pfkB family carbohydrate kinase AL543_RS03085 PF13419 Haloacid dehalogenase-like hydrolase AL543_RS03105 PF00684 DnaJ central domain AL543_RS03105 PF01556 DnaJ C terminal domain AL543_RS03105 PF00226 DnaJ domain AL543_RS03115 PF00498 FHA domain AL543_RS03115 PF00563 EAL domain AL543_RS03115 PF00990 Diguanylate cyclase, GGDEF domain AL543_RS03120 PF07055 Enoyl reductase FAD binding domain AL543_RS03120 PF12241 Trans-2-enoyl-CoA reductase catalytic region AL543_RS03120 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AL543_RS03125 PF13472 GDSL-like Lipase/Acylhydrolase family AL543_RS03130 PF00005 ABC transporter AL543_RS03140 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AL543_RS03140 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AL543_RS03150 PF02626 Carboxyltransferase domain, subdomain A and B AL543_RS03155 PF02682 Carboxyltransferase domain, subdomain C and D AL543_RS03160 PF03746 LamB/YcsF family AL543_RS03165 PF16363 GDP-mannose 4,6 dehydratase AL543_RS03175 PF03222 Tryptophan/tyrosine permease family AL543_RS03185 PF04336 Acyl carrier protein phosphodiesterase AL543_RS03190 PF00270 DEAD/DEAH box helicase AL543_RS03190 PF00271 Helicase conserved C-terminal domain AL543_RS03200 PF00034 Cytochrome c AL543_RS03205 PF01212 Beta-eliminating lyase AL543_RS03210 PF00293 NUDIX domain AL543_RS03215 PF17868 AAA lid domain AL543_RS03215 PF07728 AAA domain (dynein-related subfamily) AL543_RS03215 PF12592 Protein of unknown function (DUF3763) AL543_RS03220 PF05762 VWA domain containing CoxE-like protein AL543_RS03230 PF00005 ABC transporter AL543_RS03235 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL543_RS03240 PF00528 Binding-protein-dependent transport system inner membrane component AL543_RS03245 PF00528 Binding-protein-dependent transport system inner membrane component AL543_RS03250 PF02634 FdhD/NarQ family AL543_RS03255 PF03466 LysR substrate binding domain AL543_RS03255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL543_RS03260 PF13358 DDE superfamily endonuclease AL543_RS03275 PF00384 Molybdopterin oxidoreductase AL543_RS03295 PF11756 Nitrous oxide-stimulated promoter AL543_RS03300 PF07690 Major Facilitator Superfamily AL543_RS03305 PF00085 Thioredoxin AL543_RS03310 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AL543_RS03310 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AL543_RS03320 PF00535 Glycosyl transferase family 2 AL543_RS03330 PF13183 4Fe-4S dicluster domain AL543_RS03330 PF02754 Cysteine-rich domain AL543_RS03335 PF00890 FAD binding domain AL543_RS03340 PF04324 BFD-like [2Fe-2S] binding domain AL543_RS03340 PF01266 FAD dependent oxidoreductase AL543_RS03350 PF00230 Major intrinsic protein AL543_RS03355 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AL543_RS03355 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AL543_RS03365 PF04363 Protein of unknown function (DUF496) AL543_RS03375 PF04337 Protein of unknown function, DUF480 AL543_RS03380 PF13358 DDE superfamily endonuclease AL543_RS03385 PF01541 GIY-YIG catalytic domain AL543_RS03395 PF13407 Periplasmic binding protein domain AL543_RS03400 PF00512 His Kinase A (phospho-acceptor) domain AL543_RS03400 PF00072 Response regulator receiver domain AL543_RS03400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL543_RS03400 PF09308 LuxQ, periplasmic AL543_RS03420 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AL543_RS03420 PF07685 CobB/CobQ-like glutamine amidotransferase domain AL543_RS03430 PF00528 Binding-protein-dependent transport system inner membrane component AL543_RS03435 PF00005 ABC transporter AL543_RS03435 PF03459 TOBE domain AL543_RS03455 PF12805 FUSC-like inner membrane protein yccS AL543_RS03460 PF13361 UvrD-like helicase C-terminal domain AL543_RS03460 PF12462 DNA helicase IV / RNA helicase N terminal AL543_RS03460 PF00580 UvrD/REP helicase N-terminal domain AL543_RS03465 PF02868 Thermolysin metallopeptidase, alpha-helical domain AL543_RS03465 PF01447 Thermolysin metallopeptidase, catalytic domain AL543_RS03465 PF03413 Peptidase propeptide and YPEB domain AL543_RS03465 PF07504 Fungalysin/Thermolysin Propeptide Motif AL543_RS03485 PF01219 Prokaryotic diacylglycerol kinase AL543_RS03490 PF13358 DDE superfamily endonuclease AL543_RS03500 PF00857 Isochorismatase family AL543_RS03505 PF02142 MGS-like domain AL543_RS03510 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AL543_RS03515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL543_RS03515 PF01627 Hpt domain AL543_RS03515 PF00672 HAMP domain AL543_RS03515 PF00072 Response regulator receiver domain AL543_RS03515 PF00512 His Kinase A (phospho-acceptor) domain AL543_RS03520 PF02887 Pyruvate kinase, alpha/beta domain AL543_RS03520 PF00224 Pyruvate kinase, barrel domain AL543_RS03525 PF07690 Major Facilitator Superfamily AL543_RS03540 PF00512 His Kinase A (phospho-acceptor) domain AL543_RS03540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL543_RS03540 PF02743 Cache domain AL543_RS03545 PF14532 Sigma-54 interaction domain AL543_RS03545 PF00072 Response regulator receiver domain AL543_RS03545 PF02954 Bacterial regulatory protein, Fis family AL543_RS03560 PF00704 Glycosyl hydrolases family 18 AL543_RS03560 PF06483 Chitinase C AL543_RS03565 PF00483 Nucleotidyl transferase AL543_RS03570 PF00990 Diguanylate cyclase, GGDEF domain AL543_RS03585 PF07549 SecD/SecF GG Motif AL543_RS03585 PF02355 Protein export membrane protein AL543_RS03585 PF13721 SecD export protein N-terminal TM region AL543_RS03590 PF02355 Protein export membrane protein AL543_RS03590 PF07549 SecD/SecF GG Motif AL543_RS03595 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AL543_RS03600 PF02378 Phosphotransferase system, EIIC AL543_RS03605 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AL543_RS03615 PF00728 Glycosyl hydrolase family 20, catalytic domain AL543_RS03615 PF03173 Putative carbohydrate binding domain AL543_RS03615 PF02838 Glycosyl hydrolase family 20, domain 2 AL543_RS03615 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain AL543_RS03620 PF00106 short chain dehydrogenase AL543_RS03625 PF00108 Thiolase, N-terminal domain AL543_RS03625 PF02803 Thiolase, C-terminal domain AL543_RS03635 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus AL543_RS03645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL543_RS03645 PF03466 LysR substrate binding domain AL543_RS03665 PF04972 BON domain AL543_RS03665 PF00263 Bacterial type II and III secretion system protein AL543_RS03665 PF13629 Pilus formation protein N terminal region AL543_RS03680 PF00437 Type II/IV secretion system protein AL543_RS03720 PF08402 TOBE domain AL543_RS03720 PF00005 ABC transporter AL543_RS03725 PF00528 Binding-protein-dependent transport system inner membrane component AL543_RS03735 PF07690 Major Facilitator Superfamily AL543_RS03740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL543_RS03740 PF05231 MASE1 AL543_RS03740 PF07730 Histidine kinase AL543_RS03745 PF00072 Response regulator receiver domain AL543_RS03745 PF00196 Bacterial regulatory proteins, luxR family AL543_RS03750 PF01966 HD domain AL543_RS03760 PF03264 NapC/NirT cytochrome c family, N-terminal region AL543_RS03765 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) AL543_RS03770 PF01568 Molydopterin dinucleotide binding domain AL543_RS03770 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AL543_RS03770 PF00384 Molybdopterin oxidoreductase AL543_RS03780 PF13187 4Fe-4S dicluster domain AL543_RS03780 PF00037 4Fe-4S binding domain AL543_RS03780 PF12800 4Fe-4S binding domain AL543_RS03785 PF07730 Histidine kinase AL543_RS03785 PF00672 HAMP domain AL543_RS03785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL543_RS03785 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AL543_RS03790 PF00196 Bacterial regulatory proteins, luxR family AL543_RS03790 PF00072 Response regulator receiver domain AL543_RS03795 PF03313 Serine dehydratase alpha chain AL543_RS03795 PF03315 Serine dehydratase beta chain AL543_RS03800 PF03606 C4-dicarboxylate anaerobic carrier AL543_RS03805 PF12729 Four helix bundle sensory module for signal transduction AL543_RS03805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL543_RS03805 PF00672 HAMP domain AL543_RS03810 PF13419 Haloacid dehalogenase-like hydrolase AL543_RS03815 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AL543_RS03815 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AL543_RS03820 PF00691 OmpA family AL543_RS03825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL543_RS03825 PF00672 HAMP domain AL543_RS03825 PF17200 Single Cache domain 2 AL543_RS03830 PF01266 FAD dependent oxidoreductase AL543_RS03830 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AL543_RS03885 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL543_RS03885 PF00529 HlyD membrane-fusion protein of T1SS AL543_RS03890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL543_RS03890 PF03466 LysR substrate binding domain AL543_RS03895 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL543_RS03895 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AL543_RS03910 PF04143 Sulphur transport AL543_RS03925 PF00873 AcrB/AcrD/AcrF family AL543_RS03930 PF01797 Transposase IS200 like AL543_RS03935 PF00881 Nitroreductase family AL543_RS03945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL543_RS03945 PF03466 LysR substrate binding domain AL543_RS03955 PF06942 GlpM protein AL543_RS03980 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AL543_RS03980 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AL543_RS04010 PF02780 Transketolase, C-terminal domain AL543_RS04010 PF00456 Transketolase, thiamine diphosphate binding domain AL543_RS04010 PF02779 Transketolase, pyrimidine binding domain AL543_RS04015 PF00923 Transaldolase/Fructose-6-phosphate aldolase AL543_RS04025 PF04198 Putative sugar-binding domain AL543_RS04030 PF00704 Glycosyl hydrolases family 18 AL543_RS04030 PF08329 Chitinase A, N-terminal domain AL543_RS04035 PF00581 Rhodanese-like domain AL543_RS04045 PF00899 ThiF family AL543_RS04050 PF03453 MoeA N-terminal region (domain I and II) AL543_RS04050 PF00994 Probable molybdopterin binding domain AL543_RS04050 PF03454 MoeA C-terminal region (domain IV) AL543_RS04055 PF01227 GTP cyclohydrolase I AL543_RS04060 PF01641 SelR domain AL543_RS04060 PF01625 Peptide methionine sulfoxide reductase AL543_RS04065 PF01268 Formate--tetrahydrofolate ligase AL543_RS04070 PF01741 Large-conductance mechanosensitive channel, MscL AL543_RS04075 PF00465 Iron-containing alcohol dehydrogenase AL543_RS04095 PF13419 Haloacid dehalogenase-like hydrolase AL543_RS04100 PF14760 Rnk N-terminus AL543_RS04100 PF01272 Transcription elongation factor, GreA/GreB, C-term AL543_RS04105 PF13419 Haloacid dehalogenase-like hydrolase AL543_RS04110 PF00202 Aminotransferase class-III AL543_RS04115 PF00266 Aminotransferase class-V AL543_RS04125 PF00005 ABC transporter AL543_RS04130 PF00528 Binding-protein-dependent transport system inner membrane component AL543_RS04135 PF00392 Bacterial regulatory proteins, gntR family AL543_RS04135 PF07702 UTRA domain AL543_RS04145 PF00854 POT family AL543_RS04170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL543_RS04175 PF00528 Binding-protein-dependent transport system inner membrane component AL543_RS04180 PF12911 N-terminal TM domain of oligopeptide transport permease C AL543_RS04180 PF00528 Binding-protein-dependent transport system inner membrane component AL543_RS04185 PF00005 ABC transporter AL543_RS04185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL543_RS04195 PF12804 MobA-like NTP transferase domain AL543_RS04195 PF03479 Plants and Prokaryotes Conserved (PCC) domain AL543_RS04195 PF00132 Bacterial transferase hexapeptide (six repeats) AL543_RS04210 PF02798 Glutathione S-transferase, N-terminal domain AL543_RS04210 PF00043 Glutathione S-transferase, C-terminal domain AL543_RS04230 PF03061 Thioesterase superfamily AL543_RS04240 PF12793 Sugar transport-related sRNA regulator N-term AL543_RS04240 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL543_RS04245 PF07715 TonB-dependent Receptor Plug Domain AL543_RS04245 PF00593 TonB dependent receptor AL543_RS04250 PF03466 LysR substrate binding domain AL543_RS04250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL543_RS04255 PF13607 Succinyl-CoA ligase like flavodoxin domain AL543_RS04255 PF13380 CoA binding domain AL543_RS04255 PF00583 Acetyltransferase (GNAT) family AL543_RS04265 PF07478 D-ala D-ala ligase C-terminus AL543_RS04265 PF01820 D-ala D-ala ligase N-terminus AL543_RS04275 PF01253 Translation initiation factor SUI1 AL543_RS04280 PF17837 4'-phosphopantetheinyl transferase N-terminal domain AL543_RS04280 PF01648 4'-phosphopantetheinyl transferase superfamily AL543_RS04285 PF00664 ABC transporter transmembrane region AL543_RS04285 PF00005 ABC transporter AL543_RS04290 PF00664 ABC transporter transmembrane region AL543_RS04290 PF00005 ABC transporter AL543_RS04295 PF13193 AMP-binding enzyme C-terminal domain AL543_RS04295 PF00501 AMP-binding enzyme AL543_RS04300 PF00425 chorismate binding enzyme AL543_RS04305 PF00975 Thioesterase domain AL543_RS04315 PF13193 AMP-binding enzyme C-terminal domain AL543_RS04315 PF00501 AMP-binding enzyme AL543_RS04315 PF00550 Phosphopantetheine attachment site AL543_RS04315 PF00668 Condensation domain AL543_RS04320 PF00668 Condensation domain AL543_RS04320 PF08242 Methyltransferase domain AL543_RS04320 PF00550 Phosphopantetheine attachment site AL543_RS04320 PF00501 AMP-binding enzyme AL543_RS04325 PF07690 Major Facilitator Superfamily AL543_RS04330 PF07715 TonB-dependent Receptor Plug Domain AL543_RS04330 PF00593 TonB dependent receptor AL543_RS04395 PF03701 Uncharacterised protein family (UPF0181) AL543_RS04410 PF00072 Response regulator receiver domain AL543_RS04410 PF00486 Transcriptional regulatory protein, C terminal AL543_RS04420 PF02233 NAD(P) transhydrogenase beta subunit AL543_RS04425 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AL543_RS04425 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AL543_RS04425 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AL543_RS04440 PF00072 Response regulator receiver domain AL543_RS04440 PF00990 Diguanylate cyclase, GGDEF domain AL543_RS04460 PF17158 Membrane-associated sensor, integral membrane domain AL543_RS04460 PF00990 Diguanylate cyclase, GGDEF domain AL543_RS04495 PF08274 PhnA Zinc-Ribbon AL543_RS04495 PF03831 PhnA domain AL543_RS04505 PF03741 Integral membrane protein TerC family AL543_RS04510 PF02872 5'-nucleotidase, C-terminal domain AL543_RS04510 PF00149 Calcineurin-like phosphoesterase AL543_RS04515 PF11398 Protein of unknown function (DUF2813) AL543_RS04520 PF06496 Protein of unknown function (DUF1097) AL543_RS04525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL543_RS04525 PF03466 LysR substrate binding domain AL543_RS04530 PF01226 Formate/nitrite transporter AL543_RS04535 PF04264 YceI-like domain AL543_RS04540 PF01292 Prokaryotic cytochrome b561 AL543_RS04550 PF00563 EAL domain AL543_RS04550 PF03707 Bacterial signalling protein N terminal repeat AL543_RS04550 PF00990 Diguanylate cyclase, GGDEF domain AL543_RS04555 PF02743 Cache domain AL543_RS04555 PF00672 HAMP domain AL543_RS04555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL543_RS04560 PF00672 HAMP domain AL543_RS04560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL543_RS04560 PF02743 Cache domain AL543_RS04575 PF07646 Kelch motif AL543_RS04580 PF01344 Kelch motif AL543_RS04585 PF01418 Helix-turn-helix domain, rpiR family AL543_RS04585 PF01380 SIS domain AL543_RS04590 PF00701 Dihydrodipicolinate synthetase family AL543_RS04595 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AL543_RS04600 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AL543_RS04605 PF03480 Bacterial extracellular solute-binding protein, family 7 AL543_RS04615 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase AL543_RS04620 PF00480 ROK family AL543_RS04625 PF01979 Amidohydrolase family AL543_RS04630 PF13358 DDE superfamily endonuclease AL543_RS04635 PF13088 BNR repeat-like domain AL543_RS04635 PF09264 Vibrio cholerae sialidase, lectin insertion AL543_RS04640 PF13358 DDE superfamily endonuclease AL543_RS04645 PF13088 BNR repeat-like domain AL543_RS04645 PF09264 Vibrio cholerae sialidase, lectin insertion AL543_RS04650 PF01926 50S ribosome-binding GTPase AL543_RS04655 PF02492 CobW/HypB/UreG, nucleotide-binding domain AL543_RS04655 PF07683 Cobalamin synthesis protein cobW C-terminal domain AL543_RS04660 PF00654 Voltage gated chloride channel AL543_RS04675 PF00155 Aminotransferase class I and II AL543_RS04680 PF00072 Response regulator receiver domain AL543_RS04680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL543_RS04685 PF13476 AAA domain AL543_RS04690 PF00149 Calcineurin-like phosphoesterase AL543_RS04690 PF12320 Type 5 capsule protein repressor C-terminal domain AL543_RS04695 PF00356 Bacterial regulatory proteins, lacI family AL543_RS04695 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AL543_RS04700 PF00381 PTS HPr component phosphorylation site AL543_RS04700 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AL543_RS04705 PF00294 pfkB family carbohydrate kinase AL543_RS04710 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AL543_RS04710 PF02378 Phosphotransferase system, EIIC AL543_RS04715 PF12792 CSS motif domain associated with EAL AL543_RS04715 PF00563 EAL domain AL543_RS04720 PF18030 RimK PreATP-grasp domain AL543_RS04720 PF08443 RimK-like ATP-grasp domain AL543_RS04725 PF00155 Aminotransferase class I and II AL543_RS04735 PF13597 Anaerobic ribonucleoside-triphosphate reductase AL543_RS04735 PF03477 ATP cone domain AL543_RS04745 PF12833 Helix-turn-helix domain AL543_RS04745 PF02311 AraC-like ligand binding domain AL543_RS04755 PF13358 DDE superfamily endonuclease AL543_RS04815 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL543_RS04820 PF01699 Sodium/calcium exchanger protein AL543_RS04825 PF04229 GrpB protein AL543_RS04845 PF13302 Acetyltransferase (GNAT) domain AL543_RS04870 PF13358 DDE superfamily endonuclease AL543_RS04925 PF02567 Phenazine biosynthesis-like protein AL543_RS05030 PF05016 ParE toxin of type II toxin-antitoxin system, parDE AL543_RS05120 PF01906 Putative heavy-metal-binding AL543_RS05140 PF01906 Putative heavy-metal-binding AL543_RS05155 PF13358 DDE superfamily endonuclease AL543_RS05200 PF09905 DNA-binding protein VF530 AL543_RS05205 PF01906 Putative heavy-metal-binding AL543_RS05215 PF01555 DNA methylase AL543_RS05220 PF04229 GrpB protein AL543_RS05255 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL543_RS05270 PF12464 Maltose acetyltransferase AL543_RS05270 PF14602 Hexapeptide repeat of succinyl-transferase AL543_RS05280 PF01381 Helix-turn-helix AL543_RS05285 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB AL543_RS05290 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL543_RS05295 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH AL543_RS05300 PF05016 ParE toxin of type II toxin-antitoxin system, parDE AL543_RS05360 PF13302 Acetyltransferase (GNAT) domain AL543_RS05365 PF02048 Heat-stable enterotoxin ST AL543_RS05380 PF13302 Acetyltransferase (GNAT) domain AL543_RS05450 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH AL543_RS05490 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system AL543_RS05495 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AL543_RS05550 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AL543_RS05550 PF01872 RibD C-terminal domain AL543_RS05565 PF04229 GrpB protein AL543_RS05575 PF13302 Acetyltransferase (GNAT) domain AL543_RS05625 PF00589 Phage integrase family AL543_RS05625 PF13495 Phage integrase, N-terminal SAM-like domain AL543_RS05630 PF01797 Transposase IS200 like AL543_RS05635 PF00453 Ribosomal protein L20 AL543_RS05640 PF01632 Ribosomal protein L35 AL543_RS05645 PF00707 Translation initiation factor IF-3, C-terminal domain AL543_RS05645 PF05198 Translation initiation factor IF-3, N-terminal domain AL543_RS05650 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AL543_RS05650 PF02824 TGS domain AL543_RS05650 PF03129 Anticodon binding domain AL543_RS05650 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AL543_RS05655 PF01571 Aminomethyltransferase folate-binding domain AL543_RS05655 PF08669 Glycine cleavage T-protein C-terminal barrel domain AL543_RS05665 PF00464 Serine hydroxymethyltransferase AL543_RS05670 PF01597 Glycine cleavage H-protein AL543_RS05675 PF02347 Glycine cleavage system P-protein AL543_RS05680 PF13472 GDSL-like Lipase/Acylhydrolase family AL543_RS05680 PF17996 Carbohydrate esterase 2 N-terminal AL543_RS05685 PF00194 Eukaryotic-type carbonic anhydrase AL543_RS05700 PF00768 D-alanyl-D-alanine carboxypeptidase AL543_RS05700 PF07943 Penicillin-binding protein 5, C-terminal domain AL543_RS05705 PF01614 Bacterial transcriptional regulator AL543_RS05705 PF09339 IclR helix-turn-helix domain AL543_RS05710 PF12729 Four helix bundle sensory module for signal transduction AL543_RS05710 PF00672 HAMP domain AL543_RS05710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL543_RS05715 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL543_RS05715 PF00005 ABC transporter AL543_RS05720 PF00528 Binding-protein-dependent transport system inner membrane component AL543_RS05720 PF12911 N-terminal TM domain of oligopeptide transport permease C AL543_RS05725 PF00528 Binding-protein-dependent transport system inner membrane component AL543_RS05730 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL543_RS05740 PF13186 Iron-sulfur cluster-binding domain AL543_RS05740 PF04055 Radical SAM superfamily AL543_RS05745 PF00884 Sulfatase AL543_RS05750 PF16385 Domain of unknown function AL543_RS05750 PF00884 Sulfatase AL543_RS05755 PF08448 PAS fold AL543_RS05755 PF00990 Diguanylate cyclase, GGDEF domain AL543_RS05760 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain AL543_RS05760 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain AL543_RS05760 PF02278 Polysaccharide lyase family 8, super-sandwich domain AL543_RS05765 PF09508 Lacto-N-biose phosphorylase N-terminal TIM barrel domain AL543_RS05765 PF17386 Lacto-N-biose phosphorylase C-terminal domain AL543_RS05765 PF17385 Lacto-N-biose phosphorylase central domain AL543_RS05770 PF07470 Glycosyl Hydrolase Family 88 AL543_RS05780 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AL543_RS05780 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AL543_RS05785 PF01081 KDPG and KHG aldolase AL543_RS05790 PF00294 pfkB family carbohydrate kinase AL543_RS05795 PF04962 KduI/IolB family AL543_RS05805 PF00491 Arginase family AL543_RS05810 PF17944 Arginine decarboxylase C-terminal helical extension AL543_RS05810 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AL543_RS05810 PF17810 Arginine decarboxylase helical bundle domain AL543_RS05835 PF03448 MgtE intracellular N domain AL543_RS05835 PF01769 Divalent cation transporter AL543_RS05835 PF00571 CBS domain AL543_RS05840 PF00696 Amino acid kinase family AL543_RS05840 PF13840 ACT domain AL543_RS05845 PF06339 Ectoine synthase AL543_RS05850 PF00202 Aminotransferase class-III AL543_RS05855 PF00583 Acetyltransferase (GNAT) family AL543_RS05860 PF12833 Helix-turn-helix domain AL543_RS05870 PF01554 MatE AL543_RS05880 PF01329 Pterin 4 alpha carbinolamine dehydratase AL543_RS05885 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AL543_RS05890 PF00501 AMP-binding enzyme AL543_RS05890 PF13193 AMP-binding enzyme C-terminal domain AL543_RS05915 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal AL543_RS05915 PF14602 Hexapeptide repeat of succinyl-transferase AL543_RS05915 PF00132 Bacterial transferase hexapeptide (six repeats) AL543_RS05920 PF01595 Cyclin M transmembrane N-terminal domain AL543_RS05920 PF03471 Transporter associated domain AL543_RS05920 PF00571 CBS domain AL543_RS05925 PF02566 OsmC-like protein AL543_RS05930 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AL543_RS05935 PF08448 PAS fold AL543_RS05935 PF08447 PAS fold AL543_RS05935 PF00563 EAL domain AL543_RS05935 PF00990 Diguanylate cyclase, GGDEF domain AL543_RS05940 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AL543_RS05940 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AL543_RS05955 PF13520 Amino acid permease AL543_RS05960 PF00990 Diguanylate cyclase, GGDEF domain AL543_RS05970 PF00072 Response regulator receiver domain AL543_RS05970 PF04397 LytTr DNA-binding domain AL543_RS05975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL543_RS05975 PF06580 Histidine kinase AL543_RS05975 PF07694 5TMR of 5TMR-LYT AL543_RS05990 PF02687 FtsX-like permease family AL543_RS05990 PF12704 MacB-like periplasmic core domain AL543_RS05995 PF00005 ABC transporter AL543_RS06005 PF00248 Aldo/keto reductase family AL543_RS06010 PF00128 Alpha amylase, catalytic domain AL543_RS06015 PF13358 DDE superfamily endonuclease AL543_RS06025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL543_RS06025 PF13426 PAS domain AL543_RS06025 PF08447 PAS fold AL543_RS06035 PF00990 Diguanylate cyclase, GGDEF domain AL543_RS06040 PF03413 Peptidase propeptide and YPEB domain AL543_RS06040 PF07504 Fungalysin/Thermolysin Propeptide Motif AL543_RS06040 PF04151 Bacterial pre-peptidase C-terminal domain AL543_RS06040 PF01447 Thermolysin metallopeptidase, catalytic domain AL543_RS06040 PF02868 Thermolysin metallopeptidase, alpha-helical domain AL543_RS06050 PF03922 OmpW family AL543_RS06060 PF00768 D-alanyl-D-alanine carboxypeptidase AL543_RS06330 PF00145 C-5 cytosine-specific DNA methylase AL543_RS06610 PF00970 Oxidoreductase FAD-binding domain AL543_RS06610 PF00111 2Fe-2S iron-sulfur cluster binding domain AL543_RS06610 PF00175 Oxidoreductase NAD-binding domain AL543_RS06925 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AL543_RS06925 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AL543_RS06925 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AL543_RS06925 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AL543_RS07050 PF13520 Amino acid permease AL543_RS07100 PF00672 HAMP domain AL543_RS07100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL543_RS07100 PF02743 Cache domain AL543_RS07135 PF14850 DNA-binding domain of Proline dehydrogenase AL543_RS07135 PF00171 Aldehyde dehydrogenase family AL543_RS07135 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AL543_RS07135 PF01619 Proline dehydrogenase AL543_RS07245 PF00072 Response regulator receiver domain AL543_RS07245 PF00990 Diguanylate cyclase, GGDEF domain AL543_RS07345 PF08019 Phosphoethanolamine transferase EptA/EptB AL543_RS07345 PF00884 Sulfatase AL543_RS07450 PF00196 Bacterial regulatory proteins, luxR family AL543_RS07450 PF17874 MalT-like TPR region AL543_RS07460 PF00196 Bacterial regulatory proteins, luxR family AL543_RS07460 PF17874 MalT-like TPR region AL543_RS07835 PF00672 HAMP domain AL543_RS07835 PF17200 Single Cache domain 2 AL543_RS07835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL543_RS08025 PF01232 Mannitol dehydrogenase Rossmann domain AL543_RS08025 PF08125 Mannitol dehydrogenase C-terminal domain AL543_RS08125 PF07148 Maltose operon periplasmic protein precursor (MalM) AL543_RS08220 PF00375 Sodium:dicarboxylate symporter family AL543_RS08365 PF00158 Sigma-54 interaction domain AL543_RS08365 PF02954 Bacterial regulatory protein, Fis family AL543_RS08460 PF03009 Glycerophosphoryl diester phosphodiesterase family AL543_RS08695 PF07662 Na+ dependent nucleoside transporter C-terminus AL543_RS08695 PF01773 Na+ dependent nucleoside transporter N-terminus AL543_RS08695 PF07670 Nucleoside recognition AL543_RS09090 PF05547 Immune inhibitor A peptidase M6 AL543_RS09090 PF00801 PKD domain AL543_RS09275 PF00873 AcrB/AcrD/AcrF family AL543_RS09390 PF00294 pfkB family carbohydrate kinase AL543_RS09500 PF03222 Tryptophan/tyrosine permease family AL543_RS09525 PF01212 Beta-eliminating lyase AL543_RS09595 PF00384 Molybdopterin oxidoreductase AL543_RS09720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL543_RS09720 PF09308 LuxQ, periplasmic AL543_RS09720 PF00512 His Kinase A (phospho-acceptor) domain AL543_RS09720 PF00072 Response regulator receiver domain AL543_RS09785 PF13361 UvrD-like helicase C-terminal domain AL543_RS09785 PF00580 UvrD/REP helicase N-terminal domain AL543_RS09785 PF12462 DNA helicase IV / RNA helicase N terminal AL543_RS09790 PF12462 DNA helicase IV / RNA helicase N terminal AL543_RS09790 PF00580 UvrD/REP helicase N-terminal domain AL543_RS09790 PF13361 UvrD-like helicase C-terminal domain AL543_RS09890 PF00512 His Kinase A (phospho-acceptor) domain AL543_RS09890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL543_RS09930 PF06483 Chitinase C AL543_RS09930 PF00704 Glycosyl hydrolases family 18 AL543_RS09970 PF02355 Protein export membrane protein AL543_RS09970 PF13721 SecD export protein N-terminal TM region AL543_RS09970 PF07549 SecD/SecF GG Motif AL543_RS10605 PF01820 D-ala D-ala ligase N-terminus AL543_RS10605 PF07478 D-ala D-ala ligase C-terminus AL543_RS10745 PF08242 Methyltransferase domain AL543_RS10745 PF00550 Phosphopantetheine attachment site AL543_RS10745 PF00668 Condensation domain AL543_RS10745 PF00501 AMP-binding enzyme AL543_RS10980 PF17820 PDZ domain AL543_RS10980 PF02163 Peptidase family M50 AL543_RS12220 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AL543_RS12220 PF17944 Arginine decarboxylase C-terminal helical extension AL543_RS12220 PF17810 Arginine decarboxylase helical bundle domain AL543_RS12370 PF13520 Amino acid permease AL543_RS12495 PF08447 PAS fold AL543_RS12495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL543_RS12495 PF13426 PAS domain AL543_RS12510 PF04151 Bacterial pre-peptidase C-terminal domain AL543_RS12510 PF01447 Thermolysin metallopeptidase, catalytic domain AL543_RS12510 PF02868 Thermolysin metallopeptidase, alpha-helical domain AL543_RS12510 PF07504 Fungalysin/Thermolysin Propeptide Motif AL543_RS12510 PF03413 Peptidase propeptide and YPEB domain AL543_RS12560 PF07244 Surface antigen variable number repeat AL543_RS12560 PF01103 Surface antigen AL543_RS12575 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AL543_RS12575 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AL543_RS12575 PF13288 DXP reductoisomerase C-terminal domain AL543_RS12630 PF00925 GTP cyclohydrolase II AL543_RS12630 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AL543_RS12650 PF00696 Amino acid kinase family AL543_RS12650 PF01472 PUA domain AL543_RS12770 PF05175 Methyltransferase small domain AL543_RS12920 PF02080 TrkA-C domain AL543_RS12920 PF18030 RimK PreATP-grasp domain AL543_RS12920 PF08443 RimK-like ATP-grasp domain AL543_RS13180 PF00310 Glutamine amidotransferases class-II AL543_RS13180 PF04898 Glutamate synthase central domain AL543_RS13180 PF01645 Conserved region in glutamate synthase AL543_RS13180 PF01493 GXGXG motif AL543_RS13255 PF02142 MGS-like domain AL543_RS13255 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AL543_RS13255 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AL543_RS13320 PF01225 Mur ligase family, catalytic domain AL543_RS13320 PF02875 Mur ligase family, glutamate ligase domain AL543_RS13320 PF08245 Mur ligase middle domain AL543_RS13410 PF00456 Transketolase, thiamine diphosphate binding domain AL543_RS13410 PF17831 Pyruvate dehydrogenase E1 component middle domain AL543_RS13510 PF01751 Toprim domain AL543_RS13510 PF00204 DNA gyrase B AL543_RS13510 PF00986 DNA gyrase B subunit, carboxyl terminus AL543_RS13510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL543_RS13575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL543_RS13575 PF00672 HAMP domain AL543_RS13840 PF00180 Isocitrate/isopropylmalate dehydrogenase AL543_RS13905 PF00072 Response regulator receiver domain AL543_RS14210 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AL543_RS14210 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AL543_RS14320 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AL543_RS14365 PF00171 Aldehyde dehydrogenase family AL543_RS14525 PF01118 Semialdehyde dehydrogenase, NAD binding domain AL543_RS14525 PF02774 Semialdehyde dehydrogenase, dimerisation domain AL543_RS14810 PF02080 TrkA-C domain AL543_RS14810 PF03471 Transporter associated domain AL543_RS14810 PF00999 Sodium/hydrogen exchanger family AL543_RS14825 PF00474 Sodium:solute symporter family AL543_RS14840 PF02824 TGS domain AL543_RS14840 PF13291 ACT domain AL543_RS14840 PF04607 Region found in RelA / SpoT proteins AL543_RS15235 PF18766 SWI2/SNF2 ATPase AL543_RS15235 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AL543_RS15235 PF12008 Type I restriction and modification enzyme - subunit R C terminal AL543_RS15265 PF00140 Sigma-70 factor, region 1.2 AL543_RS15265 PF04542 Sigma-70 region 2 AL543_RS15265 PF04545 Sigma-70, region 4 AL543_RS15440 PF01612 3'-5' exonuclease AL543_RS15440 PF00476 DNA polymerase family A AL543_RS15440 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AL543_RS15440 PF01367 5'-3' exonuclease, C-terminal SAM fold AL543_RS15690 PF01321 Creatinase/Prolidase N-terminal domain AL543_RS15690 PF00557 Metallopeptidase family M24 AL543_RS15740 PF00589 Phage integrase family AL543_RS15740 PF13356 Arm DNA-binding domain AL543_RS16015 PF02092 Glycyl-tRNA synthetase beta subunit AL543_RS16015 PF05746 DALR anticodon binding domain AL543_RS16240 PF00528 Binding-protein-dependent transport system inner membrane component AL543_RS16350 PF00580 UvrD/REP helicase N-terminal domain AL543_RS16350 PF13361 UvrD-like helicase C-terminal domain AL543_RS16435 PF01032 FecCD transport family AL543_RS16650 PF01501 Glycosyl transferase family 8 AL543_RS16650 PF00535 Glycosyl transferase family 2 AL543_RS16675 PF00953 Glycosyl transferase family 4 AL543_RS16725 PF02142 MGS-like domain AL543_RS16725 PF01808 AICARFT/IMPCHase bienzyme AL543_RS16855 PF02541 Ppx/GppA phosphatase family AL543_RS16875 PF07497 Rho termination factor, RNA-binding domain AL543_RS16875 PF07498 Rho termination factor, N-terminal domain AL543_RS16875 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AL543_RS17020 PF00623 RNA polymerase Rpb1, domain 2 AL543_RS17020 PF04997 RNA polymerase Rpb1, domain 1 AL543_RS17020 PF04998 RNA polymerase Rpb1, domain 5 AL543_RS17020 PF05000 RNA polymerase Rpb1, domain 4 AL543_RS17020 PF04983 RNA polymerase Rpb1, domain 3 AL543_RS17055 PF01551 Peptidase family M23 AL543_RS17100 PF01520 N-acetylmuramoyl-L-alanine amidase AL543_RS17370 PF00563 EAL domain AL543_RS17370 PF00990 Diguanylate cyclase, GGDEF domain AL543_RS17370 PF17157 Gammaproteobacterial periplasmic sensor domain AL543_RS17445 PF10150 Ribonuclease E/G family AL543_RS17445 PF00575 S1 RNA binding domain AL543_RS17490 PF03063 Prismane/CO dehydrogenase family AL543_RS17660 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AL543_RS17660 PF01464 Transglycosylase SLT domain AL543_RS17730 PF00579 tRNA synthetases class I (W and Y) AL543_RS17730 PF01479 S4 domain AL543_RS17780 PF00593 TonB dependent receptor AL543_RS17780 PF07715 TonB-dependent Receptor Plug Domain AL543_RS17795 PF00162 Phosphoglycerate kinase AL543_RS17815 PF01797 Transposase IS200 like AL543_RS17960 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AL543_RS17960 PF02272 DHHA1 domain AL543_RS17960 PF01411 tRNA synthetases class II (A) AL543_RS17965 PF02272 DHHA1 domain AL543_RS17965 PF01411 tRNA synthetases class II (A) AL543_RS17965 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AL543_RS17970 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AL543_RS17970 PF02272 DHHA1 domain AL543_RS17970 PF01411 tRNA synthetases class II (A) AL543_RS18000 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit AL543_RS18180 PF08482 ATP-dependent helicase C-terminal AL543_RS18180 PF04408 Helicase associated domain (HA2) AL543_RS18180 PF00270 DEAD/DEAH box helicase AL543_RS18180 PF00271 Helicase conserved C-terminal domain AL543_RS18415 PF02576 RimP N-terminal domain AL543_RS18415 PF17384 RimP C-terminal SH3 domain AL543_RS18570 PF00303 Thymidylate synthase AL543_RS18820 PF01738 Dienelactone hydrolase family AL543_RS19020 PF12404 Peptidase AL543_RS19020 PF00883 Cytosol aminopeptidase family, catalytic domain AL543_RS19120 PF12705 PD-(D/E)XK nuclease superfamily AL543_RS19120 PF00580 UvrD/REP helicase N-terminal domain AL543_RS19120 PF13361 UvrD-like helicase C-terminal domain AL543_RS19510 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AL543_RS19510 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AL543_RS19510 PF02769 AIR synthase related protein, C-terminal domain AL543_RS19605 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AL543_RS19605 PF02779 Transketolase, pyrimidine binding domain AL543_RS19605 PF02780 Transketolase, C-terminal domain AL543_RS19950 PF00905 Penicillin binding protein transpeptidase domain AL543_RS19950 PF03717 Penicillin-binding Protein dimerisation domain AL543_RS20055 PF00533 BRCA1 C Terminus (BRCT) domain AL543_RS20055 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AL543_RS20055 PF01653 NAD-dependent DNA ligase adenylation domain AL543_RS20055 PF03120 NAD-dependent DNA ligase OB-fold domain AL543_RS20055 PF12826 Helix-hairpin-helix motif