AL543_RS00010	PF00884	Sulfatase
AL543_RS00015	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS00015	PF03466	LysR substrate binding domain
AL543_RS00020	PF07690	Major Facilitator Superfamily
AL543_RS00025	PF01717	Cobalamin-independent synthase, Catalytic domain
AL543_RS00030	PF08908	AL543_RS00030
AL543_RS00035	PF13358	DDE superfamily endonuclease
AL543_RS00035	PF13551	Winged helix-turn helix
AL543_RS00035	PF13592	AL543_RS00035
AL543_RS00040	PF08908	AL543_RS00040
AL543_RS00045	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS00045	PF13682	Chemoreceptor zinc-binding domain
AL543_RS00055	PF13358	DDE superfamily endonuclease
AL543_RS00060	PF13551	Winged helix-turn helix
AL543_RS00060	PF13592	AL543_RS00060
AL543_RS00065	PF00176	SNF2 family N-terminal domain
AL543_RS00065	PF00271	Helicase conserved C-terminal domain
AL543_RS00065	PF07669	Eco57I restriction-modification methylase
AL543_RS00070	PF01551	Peptidase family M23
AL543_RS00085	PF00455	AL543_RS00085
AL543_RS00085	PF08220	DeoR-like helix-turn-helix domain
AL543_RS00090	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AL543_RS00090	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
AL543_RS00095	PF07005	Protein of unknown function, DUF1537
AL543_RS00095	PF17042	AL543_RS00095
AL543_RS00100	PF00596	Class II Aldolase and Adducin N-terminal domain
AL543_RS00105	PF01261	Xylose isomerase-like TIM barrel
AL543_RS00110	PF01370	NAD dependent epimerase/dehydratase family
AL543_RS00115	PF02447	AL543_RS00115
AL543_RS00150	PF09327	AL543_RS00150
AL543_RS00160	PF13229	Right handed beta helix region
AL543_RS00185	PF13252	AL543_RS00185
AL543_RS00210	PF05838	Glycosyl hydrolase 108
AL543_RS00210	PF09374	Predicted Peptidoglycan domain
AL543_RS00215	PF16083	AL543_RS00215
AL543_RS00220	PF00145	C-5 cytosine-specific DNA methylase
AL543_RS00235	PF09369	AL543_RS00235
AL543_RS00240	PF00271	Helicase conserved C-terminal domain
AL543_RS00265	PF13730	AL543_RS00265
AL543_RS00275	PF14549	DNA-binding transcriptional regulator Cro
AL543_RS00280	PF00717	Peptidase S24-like
AL543_RS00280	PF01381	Helix-turn-helix
AL543_RS00300	PF15969	AL543_RS00300
AL543_RS00310	PF00107	Zinc-binding dehydrogenase
AL543_RS00310	PF08240	Alcohol dehydrogenase GroES-like domain
AL543_RS00315	PF00155	Aminotransferase class I and II
AL543_RS00320	PF01053	Cys/Met metabolism PLP-dependent enzyme
AL543_RS00325	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS00325	PF03466	LysR substrate binding domain
AL543_RS00330	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL543_RS00335	PF03929	AL543_RS00335
AL543_RS00345	PF00072	Response regulator receiver domain
AL543_RS00345	PF00990	GGDEF domain
AL543_RS00350	PF00072	Response regulator receiver domain
AL543_RS00350	PF00512	His Kinase A (phospho-acceptor) domain
AL543_RS00350	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS00350	PF03924	CHASE domain
AL543_RS00350	PF13426	PAS domain
AL543_RS00355	PF07361	Cytochrome b562
AL543_RS00365	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
AL543_RS00365	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
AL543_RS00370	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
AL543_RS00375	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
AL543_RS00375	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AL543_RS00395	PF02595	Glycerate kinase family
AL543_RS00400	PF02447	AL543_RS00400
AL543_RS00405	PF05651	AL543_RS00405
AL543_RS00405	PF13556	PucR C-terminal helix-turn-helix domain
AL543_RS00410	PF00034	Cytochrome c
AL543_RS00410	PF03150	Di-haem cytochrome c peroxidase
AL543_RS00415	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS00415	PF00672	HAMP domain
AL543_RS00420	PF01243	Pyridoxamine 5'-phosphate oxidase
AL543_RS00425	PF06228	Haem utilisation ChuX/HutX
AL543_RS00430	PF04055	Radical SAM superfamily
AL543_RS00435	PF03544	Gram-negative bacterial TonB protein C-terminal
AL543_RS00440	PF01618	AL543_RS00440
AL543_RS00445	PF02472	Biopolymer transport protein ExbD/TolR
AL543_RS00450	PF01497	Periplasmic binding protein
AL543_RS00455	PF01032	FecCD transport family
AL543_RS00460	PF00005	ABC transporter
AL543_RS00465	PF00440	Bacterial regulatory proteins, tetR family
AL543_RS00470	PF04175	Protein of unknown function (DUF406)
AL543_RS00480	PF13358	DDE superfamily endonuclease
AL543_RS00485	PF13551	Winged helix-turn helix
AL543_RS00485	PF13592	AL543_RS00485
AL543_RS00490	PF01553	Acyltransferase
AL543_RS00500	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS00500	PF00672	HAMP domain
AL543_RS00500	PF02743	Cache domain
AL543_RS00505	PF00111	2Fe-2S iron-sulfur cluster binding domain
AL543_RS00505	PF00175	Oxidoreductase NAD-binding domain
AL543_RS00505	PF00970	Oxidoreductase FAD-binding domain
AL543_RS00505	PF03473	MOSC domain
AL543_RS00505	PF03476	MOSC N-terminal beta barrel domain
AL543_RS00510	PF01979	Amidohydrolase family
AL543_RS00515	PF12833	Helix-turn-helix domain
AL543_RS00520	PF13358	DDE superfamily endonuclease
AL543_RS00520	PF13551	Winged helix-turn helix
AL543_RS00520	PF13592	AL543_RS00520
AL543_RS00530	PF05656	AL543_RS00530
AL543_RS00540	PF05958	tRNA (Uracil-5-)-methyltransferase
AL543_RS00545	PF05661	AL543_RS00545
AL543_RS00550	PF00005	ABC transporter
AL543_RS00550	PF12848	ABC transporter
AL543_RS00560	PF13487	HD domain
AL543_RS00565	PF00313	'Cold-shock' DNA-binding domain
AL543_RS00575	PF04952	Succinylglutamate desuccinylase / Aspartoacylase family
AL543_RS00580	PF02311	AraC-like ligand binding domain
AL543_RS00580	PF12833	Helix-turn-helix domain
AL543_RS00585	PF00892	EamA-like transporter family
AL543_RS00590	PF00990	GGDEF domain
AL543_RS00590	PF08448	PAS fold
AL543_RS00595	PF00455	AL543_RS00595
AL543_RS00595	PF08220	DeoR-like helix-turn-helix domain
AL543_RS00600	PF03061	Thioesterase superfamily
AL543_RS00605	PF00149	Calcineurin-like phosphoesterase
AL543_RS00605	PF02872	5'-nucleotidase, C-terminal domain
AL543_RS00620	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS00625	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS00625	PF14785	Maltose transport system permease protein MalF P2 domain
AL543_RS00630	PF13416	Bacterial extracellular solute-binding protein
AL543_RS00635	PF00005	ABC transporter
AL543_RS00635	PF08402	TOBE domain
AL543_RS00640	PF13302	Acetyltransferase (GNAT) domain
AL543_RS00645	PF07073	Modulator of Rho-dependent transcription termination (ROF)
AL543_RS00650	PF13640	2OG-Fe(II) oxygenase superfamily
AL543_RS00655	PF01906	Putative heavy-metal-binding
AL543_RS00660	PF00196	Bacterial regulatory proteins, luxR family
AL543_RS00665	PF01609	Transposase DDE domain
AL543_RS00670	PF00882	Zinc dependent phospholipase C
AL543_RS00680	PF13616	PPIC-type PPIASE domain
AL543_RS00685	PF00072	Response regulator receiver domain
AL543_RS00685	PF01584	CheW-like domain
AL543_RS00690	PF01047	MarR family
AL543_RS00695	PF00990	GGDEF domain
AL543_RS00705	PF01381	Helix-turn-helix
AL543_RS00705	PF06114	Domain of unknown function (DUF955)
AL543_RS00705	PF12268	AL543_RS00705
AL543_RS00710	PF00990	GGDEF domain
AL543_RS00710	PF03924	CHASE domain
AL543_RS00715	PF13532	2OG-Fe(II) oxygenase superfamily
AL543_RS00720	PF12060	AL543_RS00720
AL543_RS00725	PF00892	EamA-like transporter family
AL543_RS00730	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS00730	PF03466	LysR substrate binding domain
AL543_RS00735	PF00990	GGDEF domain
AL543_RS00745	PF02678	Pirin
AL543_RS00745	PF05726	Pirin C-terminal cupin domain
AL543_RS00750	PF06865	Protein of unknown function (DUF1255)
AL543_RS00755	PF11012	AL543_RS00755
AL543_RS00760	PF07690	Major Facilitator Superfamily
AL543_RS00770	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS00770	PF00672	HAMP domain
AL543_RS00775	PF05362	Lon protease (S16) C-terminal proteolytic domain
AL543_RS00775	PF13654	AAA domain
AL543_RS00785	PF00005	ABC transporter
AL543_RS00785	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL543_RS00790	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS00790	PF03466	LysR substrate binding domain
AL543_RS00795	PF02652	AL543_RS00795
AL543_RS00800	PF01070	FMN-dependent dehydrogenase
AL543_RS00805	PF01565	FAD binding domain
AL543_RS00805	PF02754	AL543_RS00805
AL543_RS00805	PF02913	FAD linked oxidases, C-terminal domain
AL543_RS00805	PF13183	4Fe-4S dicluster domain
AL543_RS00810	PF01609	Transposase DDE domain
AL543_RS00810	PF13006	AL543_RS00810
AL543_RS00815	PF03618	AL543_RS00815
AL543_RS00820	PF00391	PEP-utilising enzyme, mobile domain
AL543_RS00820	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
AL543_RS00820	PF02896	PEP-utilising enzyme, TIM barrel domain
AL543_RS00825	PF07228	Stage II sporulation protein E (SpoIIE)
AL543_RS00830	PF13581	Histidine kinase-like ATPase domain
AL543_RS00840	PF01740	STAS domain
AL543_RS00840	PF11563	Protoglobin
AL543_RS00845	PF01470	Pyroglutamyl peptidase
AL543_RS00850	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS00850	PF08447	PAS fold
AL543_RS00855	PF01554	MatE
AL543_RS00860	PF01797	Transposase IS200 like
AL543_RS00865	PF00793	DAHP synthetase I family
AL543_RS00870	PF00005	ABC transporter
AL543_RS00875	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS00880	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL543_RS00885	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS00890	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
AL543_RS00890	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
AL543_RS00890	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
AL543_RS00890	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
AL543_RS00895	PF04519	AL543_RS00895
AL543_RS00900	PF01551	Peptidase family M23
AL543_RS00905	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL543_RS00905	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL543_RS00905	PF02378	Phosphotransferase system, EIIC
AL543_RS00910	PF01232	Mannitol dehydrogenase Rossmann domain
AL543_RS00910	PF08125	Mannitol dehydrogenase C-terminal domain
AL543_RS00915	PF05068	Mannitol repressor
AL543_RS00920	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
AL543_RS00925	PF00753	Metallo-beta-lactamase superfamily
AL543_RS00935	PF03733	AL543_RS00935
AL543_RS00945	PF03358	NADPH-dependent FMN reductase
AL543_RS00950	PF00892	EamA-like transporter family
AL543_RS00955	PF12802	MarR family
AL543_RS00960	PF00581	Rhodanese-like domain
AL543_RS00965	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS00965	PF03466	LysR substrate binding domain
AL543_RS00970	PF03358	NADPH-dependent FMN reductase
AL543_RS00975	PF13743	Thioredoxin
AL543_RS00980	PF08240	Alcohol dehydrogenase GroES-like domain
AL543_RS00980	PF13602	Zinc-binding dehydrogenase
AL543_RS00985	PF00892	EamA-like transporter family
AL543_RS00990	PF13460	NADH(P)-binding
AL543_RS00995	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS00995	PF03466	LysR substrate binding domain
AL543_RS01005	PF13358	DDE superfamily endonuclease
AL543_RS01005	PF13551	Winged helix-turn helix
AL543_RS01005	PF13592	AL543_RS01005
AL543_RS01010	PF00106	short chain dehydrogenase
AL543_RS01015	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS01015	PF03466	LysR substrate binding domain
AL543_RS01020	PF00579	tRNA synthetases class I (W and Y)
AL543_RS01025	PF04013	Putative SAM-dependent RNA methyltransferase
AL543_RS01035	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
AL543_RS01040	PF13520	Amino acid permease
AL543_RS01045	PF01276	Orn/Lys/Arg decarboxylase, major domain
AL543_RS01045	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
AL543_RS01045	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
AL543_RS01050	PF01609	Transposase DDE domain
AL543_RS01055	PF00196	Bacterial regulatory proteins, luxR family
AL543_RS01060	PF03176	MMPL family
AL543_RS01065	PF17131	AL543_RS01065
AL543_RS01075	PF00171	Aldehyde dehydrogenase family
AL543_RS01080	PF01037	AsnC family
AL543_RS01080	PF13412	Winged helix-turn-helix DNA-binding
AL543_RS01085	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS01085	PF00672	HAMP domain
AL543_RS01085	PF02743	Cache domain
AL543_RS01095	PF00474	Sodium:solute symporter family
AL543_RS01105	PF00171	Aldehyde dehydrogenase family
AL543_RS01105	PF01619	Proline dehydrogenase
AL543_RS01105	PF14850	DNA-binding domain of Proline dehydrogenase
AL543_RS01110	PF02311	AraC-like ligand binding domain
AL543_RS01110	PF12833	Helix-turn-helix domain
AL543_RS01115	PF08308	AL543_RS01115
AL543_RS01120	PF03781	Sulfatase-modifying factor enzyme 1
AL543_RS01120	PF08308	AL543_RS01120
AL543_RS01125	PF00196	Bacterial regulatory proteins, luxR family
AL543_RS01125	PF08448	PAS fold
AL543_RS01130	PF01243	Pyridoxamine 5'-phosphate oxidase
AL543_RS01130	PF10590	Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
AL543_RS01135	PF13437	HlyD family secretion protein
AL543_RS01135	PF13533	Biotin-lipoyl like
AL543_RS01140	PF06035	Bacterial transglutaminase-like cysteine proteinase BTLCP
AL543_RS01145	PF00563	EAL domain
AL543_RS01145	PF00990	GGDEF domain
AL543_RS01145	PF16448	AL543_RS01145
AL543_RS01150	PF00005	ABC transporter
AL543_RS01150	PF00664	ABC transporter transmembrane region
AL543_RS01160	PF07971	Glycosyl hydrolase family 92
AL543_RS01165	PF03961	AL543_RS01165
AL543_RS01170	PF00072	Response regulator receiver domain
AL543_RS01170	PF07228	Stage II sporulation protein E (SpoIIE)
AL543_RS01170	PF13581	Histidine kinase-like ATPase domain
AL543_RS01175	PF01740	STAS domain
AL543_RS01180	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS01185	PF00072	Response regulator receiver domain
AL543_RS01185	PF01339	CheB methylesterase
AL543_RS01190	PF03975	CheD chemotactic sensory transduction
AL543_RS01200	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS01200	PF13188	PAS domain
AL543_RS01200	PF13426	PAS domain
AL543_RS01205	PF01584	CheW-like domain
AL543_RS01210	PF01584	CheW-like domain
AL543_RS01215	PF01584	CheW-like domain
AL543_RS01215	PF01627	Hpt domain
AL543_RS01215	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS01215	PF02895	Signal transducing histidine kinase, homodimeric domain
AL543_RS01220	PF00072	Response regulator receiver domain
AL543_RS01225	PF13466	STAS domain
AL543_RS01230	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL543_RS01235	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS01240	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS01245	PF00005	ABC transporter
AL543_RS01250	PF00884	Sulfatase
AL543_RS01250	PF08019	AL543_RS01250
AL543_RS01255	PF01797	Transposase IS200 like
AL543_RS01260	PF00512	His Kinase A (phospho-acceptor) domain
AL543_RS01260	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS01260	PF08521	AL543_RS01260
AL543_RS01265	PF00072	Response regulator receiver domain
AL543_RS01265	PF00486	Transcriptional regulatory protein, C terminal
AL543_RS01270	PF14559	Tetratricopeptide repeat
AL543_RS01275	PF00106	short chain dehydrogenase
AL543_RS01280	PF14518	Iron-containing redox enzyme
AL543_RS01285	PF00501	AMP-binding enzyme
AL543_RS01290	PF12261	AL543_RS01290
AL543_RS01295	PF05127	Helicase
AL543_RS01295	PF13718	GNAT acetyltransferase 2
AL543_RS01300	PF13416	Bacterial extracellular solute-binding protein
AL543_RS01305	PF02195	ParB-like nuclease domain
AL543_RS01310	PF13614	AAA domain
AL543_RS01320	PF11826	AL543_RS01320
AL543_RS01335	PF11686	AL543_RS01335
AL543_RS01340	PF01709	Transcriptional regulator
AL543_RS01345	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AL543_RS01345	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
AL543_RS01355	PF10928	Protein of unknown function (DUF2810)
AL543_RS01360	PF00196	Bacterial regulatory proteins, luxR family
AL543_RS01365	PF00343	Carbohydrate phosphorylase
AL543_RS01370	PF02446	4-alpha-glucanotransferase
AL543_RS01375	PF00128	Alpha amylase, catalytic domain
AL543_RS01375	PF02806	Alpha amylase, C-terminal all-beta domain
AL543_RS01375	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
AL543_RS01380	PF05638	Protein of unknown function (DUF796)
AL543_RS01385	PF05954	Phage late control gene D protein (GPD)
AL543_RS01390	PF13503	AL543_RS01390
AL543_RS01405	PF01124	MAPEG family
AL543_RS01410	PF01757	AL543_RS01410
AL543_RS01415	PF03547	AL543_RS01415
AL543_RS01420	PF00939	Sodium:sulfate symporter transmembrane region
AL543_RS01425	PF09829	AL543_RS01425
AL543_RS01430	PF00704	Glycosyl hydrolases family 18
AL543_RS01430	PF02010	AL543_RS01430
AL543_RS01430	PF02839	Carbohydrate binding domain
AL543_RS01430	PF08329	Chitinase A, N-terminal domain
AL543_RS01435	PF01614	Bacterial transcriptional regulator
AL543_RS01435	PF09339	IclR helix-turn-helix domain
AL543_RS01440	PF00491	Arginase family
AL543_RS01445	PF05787	Bacterial protein of unknown function (DUF839)
AL543_RS01450	PF08668	HDOD domain
AL543_RS01455	PF01569	PAP2 superfamily
AL543_RS01460	PF02225	PA domain
AL543_RS01460	PF04389	Peptidase family M28
AL543_RS01465	PF00375	Sodium:dicarboxylate symporter family
AL543_RS01470	PF04314	Protein of unknown function (DUF461)
AL543_RS01475	PF02630	SCO1/SenC
AL543_RS01485	PF04018	AL543_RS01485
AL543_RS01490	PF03616	AL543_RS01490
AL543_RS01495	PF07238	PilZ domain
AL543_RS01495	PF12945	Flagellar protein YcgR
AL543_RS01500	PF14542	GCN5-related N-acetyl-transferase
AL543_RS01505	PF13443	Cro/C1-type HTH DNA-binding domain
AL543_RS01510	PF11188	AL543_RS01510
AL543_RS01515	PF03572	Peptidase family S41
AL543_RS01515	PF07676	WD40-like Beta Propeller Repeat
AL543_RS01515	PF14684	Tricorn protease C1 domain
AL543_RS01520	PF13533	Biotin-lipoyl like
AL543_RS01525	PF11742	AL543_RS01525
AL543_RS01530	PF00990	GGDEF domain
AL543_RS01545	PF01048	Phosphorylase superfamily
AL543_RS01555	PF04463	AL543_RS01555
AL543_RS01555	PF08349	AL543_RS01555
AL543_RS01560	PF13411	MerR HTH family regulatory protein
AL543_RS01565	PF00875	DNA photolyase
AL543_RS01565	PF03441	FAD binding domain of DNA photolyase
AL543_RS01570	PF01476	LysM domain
AL543_RS01570	PF03734	L,D-transpeptidase catalytic domain
AL543_RS01575	PF04728	Lipoprotein leucine-zipper
AL543_RS01580	PF00270	DEAD/DEAH box helicase
AL543_RS01580	PF00271	Helicase conserved C-terminal domain
AL543_RS01585	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS01585	PF00672	HAMP domain
AL543_RS01590	PF12849	PBP superfamily domain
AL543_RS01595	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS01600	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS01605	PF00005	ABC transporter
AL543_RS01610	PF00990	GGDEF domain
AL543_RS01615	PF00174	Oxidoreductase molybdopterin binding domain
AL543_RS01620	PF07670	Nucleoside recognition
AL543_RS01625	PF00916	AL543_RS01625
AL543_RS01625	PF01740	STAS domain
AL543_RS01635	PF01551	Peptidase family M23
AL543_RS01635	PF04225	Opacity-associated protein A LysM-like domain
AL543_RS01640	PF00563	EAL domain
AL543_RS01640	PF00990	GGDEF domain
AL543_RS01645	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS01645	PF03466	LysR substrate binding domain
AL543_RS01650	PF07690	Major Facilitator Superfamily
AL543_RS01655	PF13411	MerR HTH family regulatory protein
AL543_RS01660	PF13358	DDE superfamily endonuclease
AL543_RS01660	PF13551	Winged helix-turn helix
AL543_RS01660	PF13592	AL543_RS01660
AL543_RS01670	PF00512	His Kinase A (phospho-acceptor) domain
AL543_RS01670	PF13493	Domain of unknown function (DUF4118)
AL543_RS01675	PF01039	Carboxyl transferase domain
AL543_RS01690	PF00462	Glutaredoxin
AL543_RS01695	PF00892	EamA-like transporter family
AL543_RS01700	PF13609	Gram-negative porin
AL543_RS01705	PF02566	OsmC-like protein
AL543_RS01710	PF01047	MarR family
AL543_RS01715	PF01557	Fumarylacetoacetate (FAA) hydrolase family
AL543_RS01720	PF05437	AL543_RS01720
AL543_RS01725	PF03591	AL543_RS01725
AL543_RS01730	PF02311	AraC-like ligand binding domain
AL543_RS01730	PF12833	Helix-turn-helix domain
AL543_RS01735	PF01810	AL543_RS01735
AL543_RS01745	PF00005	ABC transporter
AL543_RS01745	PF00664	ABC transporter transmembrane region
AL543_RS01750	PF02274	Amidinotransferase
AL543_RS01755	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
AL543_RS01760	PF04399	Glutaredoxin 2, C terminal domain
AL543_RS01760	PF13417	Glutathione S-transferase, N-terminal domain
AL543_RS01765	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS01765	PF03466	LysR substrate binding domain
AL543_RS01770	PF10688	AL543_RS01770
AL543_RS01775	PF01081	KDPG and KHG aldolase
AL543_RS01780	PF00294	pfkB family carbohydrate kinase
AL543_RS01785	PF02614	Glucuronate isomerase
AL543_RS01790	PF01232	Mannitol dehydrogenase Rossmann domain
AL543_RS01790	PF08125	Mannitol dehydrogenase C-terminal domain
AL543_RS01795	PF06808	AL543_RS01795
AL543_RS01800	PF04290	AL543_RS01800
AL543_RS01805	PF03480	Bacterial extracellular solute-binding protein, family 7
AL543_RS01810	PF00392	Bacterial regulatory proteins, gntR family
AL543_RS01810	PF07729	FCD domain
AL543_RS01815	PF03786	D-mannonate dehydratase (UxuA)
AL543_RS01820	PF00270	DEAD/DEAH box helicase
AL543_RS01820	PF00271	Helicase conserved C-terminal domain
AL543_RS01835	PF12833	Helix-turn-helix domain
AL543_RS01835	PF12852	Cupin
AL543_RS01840	PF00462	Glutaredoxin
AL543_RS01845	PF04224	AL543_RS01845
AL543_RS01850	PF11730	AL543_RS01850
AL543_RS01855	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS01855	PF00672	HAMP domain
AL543_RS01855	PF12729	AL543_RS01855
AL543_RS01860	PF01547	Bacterial extracellular solute-binding protein
AL543_RS01865	PF01797	Transposase IS200 like
AL543_RS01870	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS01870	PF00672	HAMP domain
AL543_RS01870	PF12729	AL543_RS01870
AL543_RS01875	PF11212	AL543_RS01875
AL543_RS01880	PF01566	AL543_RS01880
AL543_RS01885	PF00128	Alpha amylase, catalytic domain
AL543_RS01885	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
AL543_RS01890	PF02264	LamB porin
AL543_RS01895	PF07148	AL543_RS01895
AL543_RS01900	PF08238	Sel1 repeat
AL543_RS01905	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
AL543_RS01910	PF11280	AL543_RS01910
AL543_RS01915	PF05013	N-formylglutamate amidohydrolase
AL543_RS01915	PF08014	AL543_RS01915
AL543_RS01920	PF04219	AL543_RS01920
AL543_RS01925	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS01925	PF03466	LysR substrate binding domain
AL543_RS01930	PF07681	AL543_RS01930
AL543_RS01935	PF02805	Metal binding domain of Ada
AL543_RS01935	PF06029	AlkA N-terminal domain
AL543_RS01935	PF12833	Helix-turn-helix domain
AL543_RS01940	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
AL543_RS01940	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
AL543_RS01950	PF00939	Sodium:sulfate symporter transmembrane region
AL543_RS01955	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS01955	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
AL543_RS01955	PF17203	AL543_RS01955
AL543_RS01960	PF00072	Response regulator receiver domain
AL543_RS01965	PF03600	Citrate transporter
AL543_RS01970	PF07670	Nucleoside recognition
AL543_RS01975	PF07670	Nucleoside recognition
AL543_RS01980	PF00375	Sodium:dicarboxylate symporter family
AL543_RS01985	PF00892	EamA-like transporter family
AL543_RS01990	PF02698	DUF218 domain
AL543_RS01995	PF02001	AL543_RS01995
AL543_RS02005	PF01638	HxlR-like helix-turn-helix
AL543_RS02015	PF01483	Proprotein convertase P-domain
AL543_RS02015	PF13582	Metallo-peptidase family M12B Reprolysin-like
AL543_RS02025	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
AL543_RS02030	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
AL543_RS02030	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
AL543_RS02035	PF00581	Rhodanese-like domain
AL543_RS02040	PF00563	EAL domain
AL543_RS02045	PF13419	Haloacid dehalogenase-like hydrolase
AL543_RS02050	PF00916	AL543_RS02050
AL543_RS02050	PF01740	STAS domain
AL543_RS02055	PF01797	Transposase IS200 like
AL543_RS02060	PF00849	RNA pseudouridylate synthase
AL543_RS02065	PF05488	PAAR motif
AL543_RS02075	PF05591	AL543_RS02075
AL543_RS02080	PF05943	AL543_RS02080
AL543_RS02085	PF04965	Gene 25-like lysozyme
AL543_RS02090	PF05947	AL543_RS02090
AL543_RS02095	PF06996	AL543_RS02095
AL543_RS02105	PF12790	Type VI secretion lipoprotein
AL543_RS02110	PF05936	AL543_RS02110
AL543_RS02115	PF09850	Uncharacterized protein conserved in bacteria (DUF2077)
AL543_RS02120	PF00004	ATPase family associated with various cellular activities (AAA)
AL543_RS02120	PF02861	Clp amino terminal domain
AL543_RS02120	PF07724	AAA domain (Cdc48 subfamily)
AL543_RS02120	PF10431	C-terminal, D2-small domain, of ClpB protein
AL543_RS02125	PF00158	Sigma-54 interaction domain
AL543_RS02125	PF02954	Bacterial regulatory protein, Fis family
AL543_RS02130	PF11319	AL543_RS02130
AL543_RS02135	PF06812	AL543_RS02135
AL543_RS02135	PF16989	AL543_RS02135
AL543_RS02140	PF06744	AL543_RS02140
AL543_RS02140	PF06761	AL543_RS02140
AL543_RS02140	PF14331	AL543_RS02140
AL543_RS02145	PF06812	AL543_RS02145
AL543_RS02150	PF01471	Putative peptidoglycan binding domain
AL543_RS02150	PF05954	Phage late control gene D protein (GPD)
AL543_RS02160	PF13358	DDE superfamily endonuclease
AL543_RS02160	PF13551	Winged helix-turn helix
AL543_RS02160	PF13592	AL543_RS02160
AL543_RS02170	PF11216	AL543_RS02170
AL543_RS02180	PF05025	RbsD / FucU transport protein family
AL543_RS02185	PF00005	ABC transporter
AL543_RS02190	PF02653	AL543_RS02190
AL543_RS02195	PF13407	Periplasmic binding protein domain
AL543_RS02200	PF00294	pfkB family carbohydrate kinase
AL543_RS02205	PF00356	Bacterial regulatory proteins, lacI family
AL543_RS02205	PF13377	Periplasmic binding protein-like domain
AL543_RS02210	PF04973	AL543_RS02210
AL543_RS02215	PF01048	Phosphorylase superfamily
AL543_RS02220	PF00027	Cyclic nucleotide-binding domain
AL543_RS02225	PF03009	Glycerophosphoryl diester phosphodiesterase family
AL543_RS02230	PF07690	Major Facilitator Superfamily
AL543_RS02235	PF11777	AL543_RS02235
AL543_RS02240	PF02839	Carbohydrate binding domain
AL543_RS02240	PF03067	Chitin binding domain
AL543_RS02245	PF00512	His Kinase A (phospho-acceptor) domain
AL543_RS02245	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS02245	PF13426	PAS domain
AL543_RS02250	PF00072	Response regulator receiver domain
AL543_RS02250	PF00158	Sigma-54 interaction domain
AL543_RS02250	PF02954	Bacterial regulatory protein, Fis family
AL543_RS02260	PF16868	AL543_RS02260
AL543_RS02265	PF06808	AL543_RS02265
AL543_RS02270	PF01266	FAD dependent oxidoreductase
AL543_RS02275	PF10462	Peptidase M66
AL543_RS02275	PF12561	AL543_RS02275
AL543_RS02280	PF01327	Polypeptide deformylase
AL543_RS02285	PF03611	AL543_RS02285
AL543_RS02290	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL543_RS02295	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL543_RS02300	PF00356	Bacterial regulatory proteins, lacI family
AL543_RS02300	PF13377	Periplasmic binding protein-like domain
AL543_RS02305	PF01794	AL543_RS02305
AL543_RS02305	PF08022	AL543_RS02305
AL543_RS02315	PF03222	Tryptophan/tyrosine permease family
AL543_RS02320	PF01212	Beta-eliminating lyase
AL543_RS02330	PF12843	AL543_RS02330
AL543_RS02335	PF03734	L,D-transpeptidase catalytic domain
AL543_RS02340	PF00990	GGDEF domain
AL543_RS02345	PF00313	'Cold-shock' DNA-binding domain
AL543_RS02350	PF01797	Transposase IS200 like
AL543_RS02355	PF13551	Winged helix-turn helix
AL543_RS02355	PF13592	AL543_RS02355
AL543_RS02360	PF13358	DDE superfamily endonuclease
AL543_RS02365	PF01797	Transposase IS200 like
AL543_RS02370	PF04402	Protein of unknown function (DUF541)
AL543_RS02375	PF13584	AL543_RS02375
AL543_RS02380	PF13519	von Willebrand factor type A domain
AL543_RS02380	PF14559	Tetratricopeptide repeat
AL543_RS02385	PF00092	von Willebrand factor type A domain
AL543_RS02390	PF14316	AL543_RS02390
AL543_RS02395	PF01882	AL543_RS02395
AL543_RS02400	PF07726	ATPase family associated with various cellular activities (AAA)
AL543_RS02415	PF01323	DSBA-like thioredoxin domain
AL543_RS02420	PF01773	Na+ dependent nucleoside transporter N-terminus
AL543_RS02420	PF07662	Na+ dependent nucleoside transporter C-terminus
AL543_RS02420	PF07670	Nucleoside recognition
AL543_RS02425	PF01546	Peptidase family M20/M25/M40
AL543_RS02425	PF07687	Peptidase dimerisation domain
AL543_RS02430	PF00924	Mechanosensitive ion channel
AL543_RS02435	PF00158	Sigma-54 interaction domain
AL543_RS02435	PF01590	GAF domain
AL543_RS02440	PF00042	Globin
AL543_RS02440	PF00175	Oxidoreductase NAD-binding domain
AL543_RS02440	PF00970	Oxidoreductase FAD-binding domain
AL543_RS02445	PF00313	'Cold-shock' DNA-binding domain
AL543_RS02450	PF03889	AL543_RS02450
AL543_RS02465	PF00072	Response regulator receiver domain
AL543_RS02470	PF00989	PAS fold
AL543_RS02475	PF01256	Carbohydrate kinase
AL543_RS02475	PF03853	YjeF-related protein N-terminus
AL543_RS02480	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AL543_RS02480	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL543_RS02485	PF03553	AL543_RS02485
AL543_RS02490	PF07885	Ion channel
AL543_RS02495	PF13505	Outer membrane protein beta-barrel domain
AL543_RS02505	PF00478	IMP dehydrogenase / GMP reductase domain
AL543_RS02510	PF00589	Phage integrase family
AL543_RS02515	PF02384	N-6 DNA Methylase
AL543_RS02530	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS02530	PF13589	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS02545	PF07022	Bacteriophage CI repressor helix-turn-helix domain
AL543_RS02545	PF16452	AL543_RS02545
AL543_RS02555	PF06892	AL543_RS02555
AL543_RS02580	PF05840	AL543_RS02580
AL543_RS02590	PF04606	AL543_RS02590
AL543_RS02595	PF13957	AL543_RS02595
AL543_RS02600	PF02498	AL543_RS02600
AL543_RS02610	PF03237	Terminase-like family
AL543_RS02610	PF06056	Putative ATPase subunit of terminase (gpP-like)
AL543_RS02615	PF05929	AL543_RS02615
AL543_RS02620	PF05125	AL543_RS02620
AL543_RS02625	PF05944	AL543_RS02625
AL543_RS02635	PF05926	AL543_RS02635
AL543_RS02640	PF06891	AL543_RS02640
AL543_RS02650	PF10758	AL543_RS02650
AL543_RS02655	PF10772	AL543_RS02655
AL543_RS02660	PF01258	Prokaryotic dksA/traR C4-type zinc finger
AL543_RS02665	PF16080	AL543_RS02665
AL543_RS02670	PF00959	Phage lysozyme
AL543_RS02685	PF10963	AL543_RS02685
AL543_RS02690	PF10145	AL543_RS02690
AL543_RS02695	PF10761	AL543_RS02695
AL543_RS02700	PF04865	AL543_RS02700
AL543_RS02710	PF12571	AL543_RS02710
AL543_RS02715	PF10789	AL543_RS02715
AL543_RS02735	PF00478	IMP dehydrogenase / GMP reductase domain
AL543_RS02740	PF00270	DEAD/DEAH box helicase
AL543_RS02740	PF00271	Helicase conserved C-terminal domain
AL543_RS02745	PF03605	AL543_RS02745
AL543_RS02750	PF02540	NAD synthase
AL543_RS02755	PF01467	Cytidylyltransferase
AL543_RS02760	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS02760	PF08376	Nitrate and nitrite sensing
AL543_RS02765	PF00072	Response regulator receiver domain
AL543_RS02765	PF01966	HD domain
AL543_RS02765	PF11849	AL543_RS02765
AL543_RS02770	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS02770	PF17149	AL543_RS02770
AL543_RS02780	PF03553	AL543_RS02780
AL543_RS02785	PF07690	Major Facilitator Superfamily
AL543_RS02795	PF00990	GGDEF domain
AL543_RS02800	PF00657	GDSL-like Lipase/Acylhydrolase
AL543_RS02805	PF07968	Leukocidin/Hemolysin toxin family
AL543_RS02805	PF12563	Hemolytic toxin N terminal
AL543_RS02805	PF16458	AL543_RS02805
AL543_RS02810	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS02810	PF00672	HAMP domain
AL543_RS02810	PF12729	AL543_RS02810
AL543_RS02815	PF00801	PKD domain
AL543_RS02815	PF05547	AL543_RS02815
AL543_RS02825	PF13230	Glutamine amidotransferases class-II
AL543_RS02830	PF01497	Periplasmic binding protein
AL543_RS02835	PF01032	FecCD transport family
AL543_RS02840	PF01032	FecCD transport family
AL543_RS02845	PF00005	ABC transporter
AL543_RS02850	PF12833	Helix-turn-helix domain
AL543_RS02855	PF00593	TonB dependent receptor
AL543_RS02855	PF07715	TonB-dependent Receptor Plug Domain
AL543_RS02860	PF09981	Uncharacterized protein conserved in bacteria (DUF2218)
AL543_RS02865	PF00871	Acetokinase family
AL543_RS02875	PF13580	SIS domain
AL543_RS02880	PF00367	phosphotransferase system, EIIB
AL543_RS02880	PF02378	Phosphotransferase system, EIIC
AL543_RS02885	PF01380	SIS domain
AL543_RS02885	PF01418	Helix-turn-helix domain, rpiR family
AL543_RS02890	PF02656	AL543_RS02890
AL543_RS02895	PF02656	AL543_RS02895
AL543_RS02905	PF01261	Xylose isomerase-like TIM barrel
AL543_RS02910	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
AL543_RS02915	PF08282	haloacid dehalogenase-like hydrolase
AL543_RS02920	PF00596	Class II Aldolase and Adducin N-terminal domain
AL543_RS02925	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL543_RS02930	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL543_RS02930	PF03611	AL543_RS02930
AL543_RS02935	PF00455	AL543_RS02935
AL543_RS02935	PF08220	DeoR-like helix-turn-helix domain
AL543_RS02940	PF13483	Beta-lactamase superfamily domain
AL543_RS02945	PF13358	DDE superfamily endonuclease
AL543_RS02945	PF13551	Winged helix-turn helix
AL543_RS02945	PF13592	AL543_RS02945
AL543_RS02950	PF01609	Transposase DDE domain
AL543_RS02955	PF13358	DDE superfamily endonuclease
AL543_RS02955	PF13551	Winged helix-turn helix
AL543_RS02955	PF13592	AL543_RS02955
AL543_RS02960	PF05025	RbsD / FucU transport protein family
AL543_RS02965	PF00596	Class II Aldolase and Adducin N-terminal domain
AL543_RS02980	PF02653	AL543_RS02980
AL543_RS02985	PF13407	Periplasmic binding protein domain
AL543_RS03000	PF11604	Copper binding periplasmic protein CusF
AL543_RS03000	PF16576	AL543_RS03000
AL543_RS03005	PF02321	Outer membrane efflux protein
AL543_RS03025	PF03067	Chitin binding domain
AL543_RS03030	PF04244	Deoxyribodipyrimidine photo-lyase-related protein
AL543_RS03035	PF01575	MaoC like domain
AL543_RS03040	PF12849	PBP superfamily domain
AL543_RS03045	PF11225	AL543_RS03045
AL543_RS03050	PF00575	S1 RNA binding domain
AL543_RS03050	PF00773	RNB domain
AL543_RS03050	PF08206	Ribonuclease B OB domain
AL543_RS03055	PF00270	DEAD/DEAH box helicase
AL543_RS03055	PF00271	Helicase conserved C-terminal domain
AL543_RS03055	PF03880	DbpA RNA binding domain
AL543_RS03060	PF00089	Trypsin
AL543_RS03065	PF00884	Sulfatase
AL543_RS03070	PF00294	pfkB family carbohydrate kinase
AL543_RS03075	PF05981	AL543_RS03075
AL543_RS03085	PF13419	Haloacid dehalogenase-like hydrolase
AL543_RS03095	PF03091	CutA1 divalent ion tolerance protein
AL543_RS03100	PF09997	AL543_RS03100
AL543_RS03105	PF00226	DnaJ domain
AL543_RS03105	PF12339	AL543_RS03105
AL543_RS03110	PF09818	Predicted ATPase of the ABC class
AL543_RS03115	PF00563	EAL domain
AL543_RS03115	PF00990	GGDEF domain
AL543_RS03115	PF01590	GAF domain
AL543_RS03120	PF07055	Enoyl reductase FAD binding domain
AL543_RS03120	PF12241	Trans-2-enoyl-CoA reductase catalytic region
AL543_RS03120	PF12242	NAD(P)H binding domain of trans-2-enoyl-CoA reductase
AL543_RS03125	PF13472	GDSL-like Lipase/Acylhydrolase family
AL543_RS03130	PF00005	ABC transporter
AL543_RS03135	PF02687	AL543_RS03135
AL543_RS03140	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
AL543_RS03140	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
AL543_RS03140	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
AL543_RS03145	PF01266	FAD dependent oxidoreductase
AL543_RS03150	PF02626	Allophanate hydrolase subunit 2
AL543_RS03155	PF02682	Allophanate hydrolase subunit 1
AL543_RS03160	PF03746	LamB/YcsF family
AL543_RS03165	PF16363	AL543_RS03165
AL543_RS03175	PF03222	Tryptophan/tyrosine permease family
AL543_RS03185	PF04336	AL543_RS03185
AL543_RS03190	PF00270	DEAD/DEAH box helicase
AL543_RS03190	PF00271	Helicase conserved C-terminal domain
AL543_RS03195	PF00440	Bacterial regulatory proteins, tetR family
AL543_RS03200	PF00034	Cytochrome c
AL543_RS03205	PF01212	Beta-eliminating lyase
AL543_RS03210	PF00293	NUDIX domain
AL543_RS03215	PF07728	AAA domain (dynein-related subfamily)
AL543_RS03215	PF12592	Protein of unknown function (DUF3763)
AL543_RS03220	PF05762	VWA domain containing CoxE-like protein
AL543_RS03230	PF00005	ABC transporter
AL543_RS03235	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL543_RS03240	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS03245	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS03250	PF02634	FdhD/NarQ family
AL543_RS03255	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS03255	PF03466	LysR substrate binding domain
AL543_RS03260	PF13358	DDE superfamily endonuclease
AL543_RS03260	PF13551	Winged helix-turn helix
AL543_RS03260	PF13592	AL543_RS03260
AL543_RS03265	PF13340	AL543_RS03265
AL543_RS03270	PF13586	AL543_RS03270
AL543_RS03275	PF00384	Molybdopterin oxidoreductase
AL543_RS03275	PF01568	Molydopterin dinucleotide binding domain
AL543_RS03290	PF01764	Lipase (class 3)
AL543_RS03295	PF11756	AL543_RS03295
AL543_RS03300	PF07690	Major Facilitator Superfamily
AL543_RS03305	PF00085	Thioredoxin
AL543_RS03310	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
AL543_RS03310	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
AL543_RS03315	PF00990	GGDEF domain
AL543_RS03320	PF13641	Glycosyltransferase like family 2
AL543_RS03325	PF13437	HlyD family secretion protein
AL543_RS03330	PF02754	AL543_RS03330
AL543_RS03330	PF13183	4Fe-4S dicluster domain
AL543_RS03335	PF00890	FAD binding domain
AL543_RS03340	PF01266	FAD dependent oxidoreductase
AL543_RS03340	PF04324	BFD-like [2Fe-2S] binding domain
AL543_RS03350	PF00230	Major intrinsic protein
AL543_RS03355	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
AL543_RS03355	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
AL543_RS03360	PF10688	AL543_RS03360
AL543_RS03365	PF04363	AL543_RS03365
AL543_RS03375	PF04337	Protein of unknown function, DUF480
AL543_RS03380	PF13358	DDE superfamily endonuclease
AL543_RS03380	PF13551	Winged helix-turn helix
AL543_RS03380	PF13592	AL543_RS03380
AL543_RS03385	PF01541	GIY-YIG catalytic domain
AL543_RS03390	PF13729	AL543_RS03390
AL543_RS03395	PF13407	Periplasmic binding protein domain
AL543_RS03400	PF00072	Response regulator receiver domain
AL543_RS03400	PF00512	His Kinase A (phospho-acceptor) domain
AL543_RS03400	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS03400	PF09308	LuxQ, periplasmic
AL543_RS03405	PF07238	PilZ domain
AL543_RS03405	PF12945	Flagellar protein YcgR
AL543_RS03415	PF04076	Bacterial OB fold (BOF) protein
AL543_RS03420	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
AL543_RS03420	PF07685	CobB/CobQ-like glutamine amidotransferase domain
AL543_RS03425	PF13531	Bacterial extracellular solute-binding protein
AL543_RS03430	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS03435	PF00005	ABC transporter
AL543_RS03435	PF03459	TOBE domain
AL543_RS03440	PF00368	Hydroxymethylglutaryl-coenzyme A reductase
AL543_RS03455	PF12805	AL543_RS03455
AL543_RS03455	PF13515	AL543_RS03455
AL543_RS03460	PF00580	UvrD/REP helicase N-terminal domain
AL543_RS03460	PF12462	AL543_RS03460
AL543_RS03460	PF13361	UvrD-like helicase C-terminal domain
AL543_RS03465	PF01447	Thermolysin metallopeptidase, catalytic domain
AL543_RS03465	PF02868	Thermolysin metallopeptidase, alpha-helical domain
AL543_RS03470	PF01292	Prokaryotic cytochrome b561
AL543_RS03475	PF13670	AL543_RS03475
AL543_RS03480	PF01609	Transposase DDE domain
AL543_RS03485	PF01219	Prokaryotic diacylglycerol kinase
AL543_RS03490	PF13358	DDE superfamily endonuclease
AL543_RS03490	PF13551	Winged helix-turn helix
AL543_RS03490	PF13592	AL543_RS03490
AL543_RS03495	PF01569	PAP2 superfamily
AL543_RS03500	PF00857	Isochorismatase family
AL543_RS03505	PF02142	MGS-like domain
AL543_RS03510	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
AL543_RS03515	PF00072	Response regulator receiver domain
AL543_RS03515	PF00512	His Kinase A (phospho-acceptor) domain
AL543_RS03515	PF00672	HAMP domain
AL543_RS03515	PF01627	Hpt domain
AL543_RS03515	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS03520	PF00224	Pyruvate kinase, barrel domain
AL543_RS03520	PF02887	Pyruvate kinase, alpha/beta domain
AL543_RS03525	PF07690	Major Facilitator Superfamily
AL543_RS03535	PF13343	Bacterial extracellular solute-binding protein
AL543_RS03540	PF00512	His Kinase A (phospho-acceptor) domain
AL543_RS03540	PF00672	HAMP domain
AL543_RS03540	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS03545	PF00072	Response regulator receiver domain
AL543_RS03545	PF02954	Bacterial regulatory protein, Fis family
AL543_RS03545	PF14532	Sigma-54 interaction domain
AL543_RS03550	PF07947	AL543_RS03550
AL543_RS03560	PF00704	Glycosyl hydrolases family 18
AL543_RS03560	PF02839	Carbohydrate binding domain
AL543_RS03560	PF06483	AL543_RS03560
AL543_RS03565	PF00483	Nucleotidyl transferase
AL543_RS03570	PF00990	GGDEF domain
AL543_RS03570	PF13426	PAS domain
AL543_RS03585	PF02355	Protein export membrane protein
AL543_RS03585	PF07549	SecD/SecF GG Motif
AL543_RS03585	PF13721	SecD export protein N-terminal TM region
AL543_RS03590	PF02355	Protein export membrane protein
AL543_RS03590	PF07549	SecD/SecF GG Motif
AL543_RS03595	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL543_RS03600	PF02378	Phosphotransferase system, EIIC
AL543_RS03605	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
AL543_RS03615	PF00728	Glycosyl hydrolase family 20, catalytic domain
AL543_RS03615	PF02838	Glycosyl hydrolase family 20, domain 2
AL543_RS03615	PF03173	Putative carbohydrate binding domain
AL543_RS03615	PF03174	Chitobiase/beta-hexosaminidase C-terminal domain
AL543_RS03620	PF13561	Enoyl-(Acyl carrier protein) reductase
AL543_RS03625	PF00108	Thiolase, N-terminal domain
AL543_RS03625	PF02803	Thiolase, C-terminal domain
AL543_RS03630	PF09361	AL543_RS03630
AL543_RS03635	PF07167	AL543_RS03635
AL543_RS03640	PF05547	AL543_RS03640
AL543_RS03645	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS03650	PF01478	Type IV leader peptidase family
AL543_RS03655	PF04964	AL543_RS03655
AL543_RS03665	PF00263	AL543_RS03665
AL543_RS03665	PF13629	AL543_RS03665
AL543_RS03675	PF13614	AAA domain
AL543_RS03680	PF00437	Type II/IV secretion system protein
AL543_RS03685	PF00482	Type II secretion system (T2SS), protein F
AL543_RS03690	PF00482	Type II secretion system (T2SS), protein F
AL543_RS03695	PF13432	Tetratricopeptide repeat
AL543_RS03700	PF07811	AL543_RS03700
AL543_RS03705	PF16964	AL543_RS03705
AL543_RS03715	PF00691	OmpA family
AL543_RS03720	PF00005	ABC transporter
AL543_RS03720	PF08402	TOBE domain
AL543_RS03725	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS03730	PF13343	Bacterial extracellular solute-binding protein
AL543_RS03735	PF07690	Major Facilitator Superfamily
AL543_RS03740	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS03740	PF05231	AL543_RS03740
AL543_RS03740	PF07730	Histidine kinase
AL543_RS03745	PF00072	Response regulator receiver domain
AL543_RS03745	PF00196	Bacterial regulatory proteins, luxR family
AL543_RS03750	PF01966	HD domain
AL543_RS03755	PF09574	AL543_RS03755
AL543_RS03760	PF03264	NapC/NirT cytochrome c family, N-terminal region
AL543_RS03765	PF03892	Nitrate reductase cytochrome c-type subunit (NapB)
AL543_RS03770	PF00384	Molybdopterin oxidoreductase
AL543_RS03770	PF01568	Molydopterin dinucleotide binding domain
AL543_RS03770	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
AL543_RS03775	PF03927	NapD protein
AL543_RS03780	PF12838	4Fe-4S dicluster domain
AL543_RS03785	PF00672	HAMP domain
AL543_RS03785	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS03785	PF07730	Histidine kinase
AL543_RS03785	PF13675	Type IV pili methyl-accepting chemotaxis transducer N-term
AL543_RS03790	PF00072	Response regulator receiver domain
AL543_RS03790	PF00196	Bacterial regulatory proteins, luxR family
AL543_RS03795	PF03313	AL543_RS03795
AL543_RS03795	PF03315	Serine dehydratase beta chain
AL543_RS03800	PF03606	AL543_RS03800
AL543_RS03805	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS03805	PF00672	HAMP domain
AL543_RS03810	PF13419	Haloacid dehalogenase-like hydrolase
AL543_RS03815	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AL543_RS03815	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
AL543_RS03820	PF00691	OmpA family
AL543_RS03825	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS03825	PF08447	PAS fold
AL543_RS03830	PF01266	FAD dependent oxidoreductase
AL543_RS03830	PF16901	AL543_RS03830
AL543_RS03835	PF11269	Protein of unknown function (DUF3069)
AL543_RS03840	PF09335	AL543_RS03840
AL543_RS03855	PF05742	AL543_RS03855
AL543_RS03860	PF04945	YHS domain
AL543_RS03870	PF01553	Acyltransferase
AL543_RS03870	PF13444	Acetyltransferase (GNAT) domain
AL543_RS03880	PF11168	AL543_RS03880
AL543_RS03880	PF13515	AL543_RS03880
AL543_RS03885	PF13437	HlyD family secretion protein
AL543_RS03885	PF13533	Biotin-lipoyl like
AL543_RS03890	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS03890	PF03466	LysR substrate binding domain
AL543_RS03895	PF00581	Rhodanese-like domain
AL543_RS03895	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AL543_RS03895	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL543_RS03900	PF11127	Protein of unknown function (DUF2892)
AL543_RS03905	PF12840	Helix-turn-helix domain
AL543_RS03910	PF04143	AL543_RS03910
AL543_RS03920	PF16576	AL543_RS03920
AL543_RS03925	PF00873	AcrB/AcrD/AcrF family
AL543_RS03930	PF01797	Transposase IS200 like
AL543_RS03935	PF00881	Nitroreductase family
AL543_RS03940	PF03992	Antibiotic biosynthesis monooxygenase
AL543_RS03945	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS03945	PF03466	LysR substrate binding domain
AL543_RS03950	PF12847	Methyltransferase domain
AL543_RS03955	PF06942	AL543_RS03955
AL543_RS03960	PF00293	NUDIX domain
AL543_RS03965	PF00857	Isochorismatase family
AL543_RS03970	PF13302	Acetyltransferase (GNAT) domain
AL543_RS03975	PF14234	AL543_RS03975
AL543_RS03980	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AL543_RS03980	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL543_RS03990	PF05145	AL543_RS03990
AL543_RS03995	PF13175	AAA ATPase domain
AL543_RS04000	PF14491	AL543_RS04000
AL543_RS04005	PF00588	SpoU rRNA Methylase family
AL543_RS04010	PF00456	Transketolase, thiamine diphosphate binding domain
AL543_RS04010	PF02779	Transketolase, pyrimidine binding domain
AL543_RS04010	PF02780	Transketolase, C-terminal domain
AL543_RS04015	PF00923	Transaldolase
AL543_RS04025	PF04198	Putative sugar-binding domain
AL543_RS04030	PF00704	Glycosyl hydrolases family 18
AL543_RS04035	PF00581	Rhodanese-like domain
AL543_RS04045	PF00899	ThiF family
AL543_RS04050	PF00994	Probable molybdopterin binding domain
AL543_RS04050	PF03453	MoeA N-terminal region (domain I and II)
AL543_RS04050	PF03454	MoeA C-terminal region (domain IV)
AL543_RS04055	PF01227	GTP cyclohydrolase I
AL543_RS04060	PF01625	Peptide methionine sulfoxide reductase
AL543_RS04060	PF01641	SelR domain
AL543_RS04065	PF01268	Formate--tetrahydrofolate ligase
AL543_RS04070	PF01741	Large-conductance mechanosensitive channel, MscL
AL543_RS04075	PF00465	Iron-containing alcohol dehydrogenase
AL543_RS04095	PF13419	Haloacid dehalogenase-like hydrolase
AL543_RS04100	PF01272	Transcription elongation factor, GreA/GreB, C-term
AL543_RS04100	PF14760	Rnk N-terminus
AL543_RS04105	PF13419	Haloacid dehalogenase-like hydrolase
AL543_RS04110	PF00202	Aminotransferase class-III
AL543_RS04115	PF00266	Aminotransferase class-V
AL543_RS04120	PF13343	Bacterial extracellular solute-binding protein
AL543_RS04125	PF00005	ABC transporter
AL543_RS04130	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS04135	PF00392	Bacterial regulatory proteins, gntR family
AL543_RS04135	PF07702	UTRA domain
AL543_RS04140	PF00892	EamA-like transporter family
AL543_RS04145	PF07690	Major Facilitator Superfamily
AL543_RS04150	PF02698	DUF218 domain
AL543_RS04155	PF03891	AL543_RS04155
AL543_RS04165	PF00293	NUDIX domain
AL543_RS04170	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL543_RS04175	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS04180	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS04180	PF12911	AL543_RS04180
AL543_RS04185	PF00005	ABC transporter
AL543_RS04185	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL543_RS04190	PF05193	Peptidase M16 inactive domain
AL543_RS04195	PF03479	Domain of unknown function (DUF296)
AL543_RS04200	PF00440	Bacterial regulatory proteins, tetR family
AL543_RS04205	PF13410	Glutathione S-transferase, C-terminal domain
AL543_RS04205	PF13417	Glutathione S-transferase, N-terminal domain
AL543_RS04210	PF00043	Glutathione S-transferase, C-terminal domain
AL543_RS04210	PF02798	Glutathione S-transferase, N-terminal domain
AL543_RS04215	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL543_RS04220	PF13275	S4 domain
AL543_RS04225	PF01435	Peptidase family M48
AL543_RS04230	PF03061	Thioesterase superfamily
AL543_RS04235	PF11869	AL543_RS04235
AL543_RS04240	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL543_RS04240	PF12793	AL543_RS04240
AL543_RS04245	PF00593	TonB dependent receptor
AL543_RS04245	PF07715	TonB-dependent Receptor Plug Domain
AL543_RS04250	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS04250	PF03466	LysR substrate binding domain
AL543_RS04255	PF00583	Acetyltransferase (GNAT) family
AL543_RS04255	PF13380	CoA binding domain
AL543_RS04255	PF13549	ATP-grasp domain
AL543_RS04255	PF13607	Succinyl-CoA ligase like flavodoxin domain
AL543_RS04260	PF05036	Sporulation related domain
AL543_RS04265	PF01820	D-ala D-ala ligase N-terminus
AL543_RS04265	PF07478	D-ala D-ala ligase C-terminus
AL543_RS04270	PF11782	AL543_RS04270
AL543_RS04275	PF01253	Translation initiation factor SUI1
AL543_RS04280	PF01648	4'-phosphopantetheinyl transferase superfamily
AL543_RS04285	PF00005	ABC transporter
AL543_RS04285	PF00664	ABC transporter transmembrane region
AL543_RS04290	PF00005	ABC transporter
AL543_RS04290	PF00664	ABC transporter transmembrane region
AL543_RS04295	PF00501	AMP-binding enzyme
AL543_RS04295	PF13193	AMP-binding enzyme C-terminal domain
AL543_RS04300	PF00425	chorismate binding enzyme
AL543_RS04305	PF00975	Thioesterase domain
AL543_RS04310	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
AL543_RS04315	PF00109	Beta-ketoacyl synthase, N-terminal domain
AL543_RS04315	PF00501	AMP-binding enzyme
AL543_RS04315	PF00550	Phosphopantetheine attachment site
AL543_RS04315	PF00668	Condensation domain
AL543_RS04315	PF00698	Acyl transferase domain
AL543_RS04315	PF00975	Thioesterase domain
AL543_RS04315	PF02801	Beta-ketoacyl synthase, C-terminal domain
AL543_RS04315	PF08242	Methyltransferase domain
AL543_RS04315	PF08415	AL543_RS04315
AL543_RS04315	PF08659	KR domain
AL543_RS04315	PF13193	AMP-binding enzyme C-terminal domain
AL543_RS04315	PF16197	AL543_RS04315
AL543_RS04320	PF00501	AMP-binding enzyme
AL543_RS04320	PF00550	Phosphopantetheine attachment site
AL543_RS04320	PF00668	Condensation domain
AL543_RS04320	PF08415	AL543_RS04320
AL543_RS04320	PF13847	Methyltransferase domain
AL543_RS04330	PF00593	TonB dependent receptor
AL543_RS04330	PF07715	TonB-dependent Receptor Plug Domain
AL543_RS04335	PF12833	Helix-turn-helix domain
AL543_RS04340	PF12833	Helix-turn-helix domain
AL543_RS04350	PF07750	AL543_RS04350
AL543_RS04355	PF02303	Helix-destabilising protein
AL543_RS04360	PF05144	AL543_RS04360
AL543_RS04360	PF05155	AL543_RS04360
AL543_RS04365	PF01381	Helix-turn-helix
AL543_RS04375	PF07750	AL543_RS04375
AL543_RS04380	PF02303	Helix-destabilising protein
AL543_RS04385	PF05144	AL543_RS04385
AL543_RS04385	PF05155	AL543_RS04385
AL543_RS04390	PF01381	Helix-turn-helix
AL543_RS04395	PF03701	AL543_RS04395
AL543_RS04400	PF13729	AL543_RS04400
AL543_RS04405	PF11060	AL543_RS04405
AL543_RS04410	PF00072	Response regulator receiver domain
AL543_RS04410	PF00486	Transcriptional regulatory protein, C terminal
AL543_RS04415	PF00512	His Kinase A (phospho-acceptor) domain
AL543_RS04415	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS04415	PF11884	Domain of unknown function (DUF3404)
AL543_RS04420	PF02233	NAD(P) transhydrogenase beta subunit
AL543_RS04425	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
AL543_RS04425	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
AL543_RS04425	PF12769	Domain of unknown function (DUF3814)
AL543_RS04430	PF10115	AL543_RS04430
AL543_RS04435	PF10719	AL543_RS04435
AL543_RS04440	PF00990	GGDEF domain
AL543_RS04445	PF11557	AL543_RS04445
AL543_RS04450	PF01019	Gamma-glutamyltranspeptidase
AL543_RS04460	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL543_RS04460	PF00990	GGDEF domain
AL543_RS04465	PF11810	AL543_RS04465
AL543_RS04470	PF07690	Major Facilitator Superfamily
AL543_RS04475	PF06934	AL543_RS04475
AL543_RS04490	PF02163	Peptidase family M50
AL543_RS04495	PF03831	PhnA protein
AL543_RS04495	PF08274	PhnA Zinc-Ribbon
AL543_RS04505	PF03741	AL543_RS04505
AL543_RS04510	PF00149	Calcineurin-like phosphoesterase
AL543_RS04510	PF02872	5'-nucleotidase, C-terminal domain
AL543_RS04515	PF11398	Protein of unknown function (DUF2813)
AL543_RS04520	PF06496	AL543_RS04520
AL543_RS04525	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS04525	PF03466	LysR substrate binding domain
AL543_RS04530	PF00571	CBS domain
AL543_RS04530	PF01226	Formate/nitrite transporter
AL543_RS04535	PF04264	YceI-like domain
AL543_RS04540	PF01292	Prokaryotic cytochrome b561
AL543_RS04550	PF00563	EAL domain
AL543_RS04555	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS04555	PF00672	HAMP domain
AL543_RS04560	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS04560	PF00672	HAMP domain
AL543_RS04570	PF09335	AL543_RS04570
AL543_RS04575	PF07646	Kelch motif
AL543_RS04580	PF01344	Kelch motif
AL543_RS04585	PF01380	SIS domain
AL543_RS04585	PF01418	Helix-turn-helix domain, rpiR family
AL543_RS04590	PF00701	Dihydrodipicolinate synthetase family
AL543_RS04595	PF06808	AL543_RS04595
AL543_RS04600	PF04290	AL543_RS04600
AL543_RS04605	PF03480	Bacterial extracellular solute-binding protein, family 7
AL543_RS04615	PF04131	Putative N-acetylmannosamine-6-phosphate epimerase
AL543_RS04620	PF00480	ROK family
AL543_RS04625	PF01979	Amidohydrolase family
AL543_RS04630	PF13358	DDE superfamily endonuclease
AL543_RS04630	PF13551	Winged helix-turn helix
AL543_RS04630	PF13592	AL543_RS04630
AL543_RS04635	PF09264	Vibrio cholerae sialidase, lectin insertion
AL543_RS04640	PF13358	DDE superfamily endonuclease
AL543_RS04640	PF13551	Winged helix-turn helix
AL543_RS04640	PF13592	AL543_RS04640
AL543_RS04645	PF09264	Vibrio cholerae sialidase, lectin insertion
AL543_RS04645	PF13088	BNR repeat-like domain
AL543_RS04650	PF01926	50S ribosome-binding GTPase
AL543_RS04655	PF02492	CobW/HypB/UreG, nucleotide-binding domain
AL543_RS04660	PF00654	Voltage gated chloride channel
AL543_RS04665	PF03595	Voltage-dependent anion channel
AL543_RS04670	PF01609	Transposase DDE domain
AL543_RS04675	PF00155	Aminotransferase class I and II
AL543_RS04680	PF00072	Response regulator receiver domain
AL543_RS04680	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS04685	PF13476	AAA domain
AL543_RS04685	PF13558	Putative exonuclease SbcCD, C subunit
AL543_RS04690	PF00149	Calcineurin-like phosphoesterase
AL543_RS04690	PF12320	Type 5 capsule protein repressor C-terminal domain
AL543_RS04695	PF00356	Bacterial regulatory proteins, lacI family
AL543_RS04695	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
AL543_RS04700	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL543_RS04700	PF00381	PTS HPr component phosphorylation site
AL543_RS04705	PF00294	pfkB family carbohydrate kinase
AL543_RS04710	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL543_RS04710	PF02378	Phosphotransferase system, EIIC
AL543_RS04715	PF00563	EAL domain
AL543_RS04720	PF05618	Putative ATP-dependant zinc protease
AL543_RS04725	PF00155	Aminotransferase class I and II
AL543_RS04730	PF13353	4Fe-4S single cluster domain
AL543_RS04735	PF03477	ATP cone domain
AL543_RS04735	PF13597	Anaerobic ribonucleoside-triphosphate reductase
AL543_RS04740	PF02627	Carboxymuconolactone decarboxylase family
AL543_RS04745	PF12833	Helix-turn-helix domain
AL543_RS04745	PF12852	Cupin
AL543_RS04750	PF01663	Type I phosphodiesterase / nucleotide pyrophosphatase
AL543_RS04755	PF13358	DDE superfamily endonuclease
AL543_RS04755	PF13551	Winged helix-turn helix
AL543_RS04755	PF13592	AL543_RS04755
AL543_RS04760	PF13340	AL543_RS04760
AL543_RS04765	PF02661	Fic/DOC family
AL543_RS04770	PF04875	AL543_RS04770
AL543_RS04780	PF04365	Protein of unknown function (DUF497)
AL543_RS04785	PF04875	AL543_RS04785
AL543_RS04795	PF08843	Nucleotidyl transferase of unknown function (DUF1814)
AL543_RS04800	PF14106	AL543_RS04800
AL543_RS04810	PF00583	Acetyltransferase (GNAT) family
AL543_RS04815	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL543_RS04820	PF01699	Sodium/calcium exchanger protein
AL543_RS04825	PF04229	GrpB protein
AL543_RS04835	PF00076	RNA recognition motif
AL543_RS04840	PF04875	AL543_RS04840
AL543_RS04845	PF13302	Acetyltransferase (GNAT) domain
AL543_RS04870	PF13358	DDE superfamily endonuclease
AL543_RS04870	PF13551	Winged helix-turn helix
AL543_RS04870	PF13592	AL543_RS04870
AL543_RS04880	PF12681	Glyoxalase-like domain
AL543_RS04885	PF04221	RelB antitoxin
AL543_RS04890	PF05016	Plasmid stabilisation system protein
AL543_RS04905	PF01609	Transposase DDE domain
AL543_RS04910	PF00574	Clp protease
AL543_RS04915	PF01609	Transposase DDE domain
AL543_RS04925	PF02567	Phenazine biosynthesis-like protein
AL543_RS04930	PF04237	YjbR
AL543_RS04940	PF09016	Pas factor saposin fold
AL543_RS04955	PF00076	RNA recognition motif
AL543_RS04960	PF03358	NADPH-dependent FMN reductase
AL543_RS04965	PF13302	Acetyltransferase (GNAT) domain
AL543_RS04970	PF01609	Transposase DDE domain
AL543_RS04985	PF07653	Variant SH3 domain
AL543_RS04990	PF01609	Transposase DDE domain
AL543_RS05000	PF12493	AL543_RS05000
AL543_RS05005	PF01609	Transposase DDE domain
AL543_RS05010	PF13340	AL543_RS05010
AL543_RS05020	PF01609	Transposase DDE domain
AL543_RS05025	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
AL543_RS05030	PF05016	Plasmid stabilisation system protein
AL543_RS05035	PF12680	SnoaL-like domain
AL543_RS05040	PF07929	Plasmid pRiA4b ORF-3-like protein
AL543_RS05045	PF11948	AL543_RS05045
AL543_RS05085	PF13673	Acetyltransferase (GNAT) domain
AL543_RS05090	PF13673	Acetyltransferase (GNAT) domain
AL543_RS05095	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
AL543_RS05100	PF05016	Plasmid stabilisation system protein
AL543_RS05120	PF01906	Putative heavy-metal-binding
AL543_RS05130	PF04299	Putative FMN-binding domain
AL543_RS05140	PF01906	Putative heavy-metal-binding
AL543_RS05150	PF01391	Collagen triple helix repeat (20 copies)
AL543_RS05155	PF13358	DDE superfamily endonuclease
AL543_RS05155	PF13551	Winged helix-turn helix
AL543_RS05155	PF13592	AL543_RS05155
AL543_RS05160	PF04875	AL543_RS05160
AL543_RS05185	PF04875	AL543_RS05185
AL543_RS05195	PF13673	Acetyltransferase (GNAT) domain
AL543_RS05200	PF09905	Uncharacterized conserved protein (DUF2132)
AL543_RS05205	PF01906	Putative heavy-metal-binding
AL543_RS05210	PF11948	AL543_RS05210
AL543_RS05215	PF01555	DNA methylase
AL543_RS05220	PF04229	GrpB protein
AL543_RS05235	PF13669	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL543_RS05255	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL543_RS05265	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL543_RS05270	PF12464	Maltose acetyltransferase
AL543_RS05270	PF14602	Hexapeptide repeat of succinyl-transferase
AL543_RS05275	PF10899	AL543_RS05275
AL543_RS05280	PF01381	Helix-turn-helix
AL543_RS05285	PF05015	Plasmid maintenance system killer protein
AL543_RS05290	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL543_RS05295	PF03693	Uncharacterised protein family (UPF0156)
AL543_RS05300	PF05016	Plasmid stabilisation system protein
AL543_RS05315	PF12493	AL543_RS05315
AL543_RS05335	PF02498	AL543_RS05335
AL543_RS05345	PF01202	Shikimate kinase
AL543_RS05355	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL543_RS05360	PF00583	Acetyltransferase (GNAT) family
AL543_RS05365	PF02048	Heat-stable enterotoxin ST
AL543_RS05370	PF00583	Acetyltransferase (GNAT) family
AL543_RS05375	PF11225	AL543_RS05375
AL543_RS05380	PF13302	Acetyltransferase (GNAT) domain
AL543_RS05395	PF04266	ASCH domain
AL543_RS05400	PF07362	Post-segregation antitoxin CcdA
AL543_RS05405	PF01845	CcdB protein
AL543_RS05415	PF11185	AL543_RS05415
AL543_RS05425	PF13175	AAA ATPase domain
AL543_RS05430	PF00665	Integrase core domain
AL543_RS05430	PF13936	Helix-turn-helix domain
AL543_RS05450	PF03693	Uncharacterised protein family (UPF0156)
AL543_RS05455	PF05016	Plasmid stabilisation system protein
AL543_RS05460	PF05016	Plasmid stabilisation system protein
AL543_RS05465	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
AL543_RS05470	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL543_RS05480	PF11225	AL543_RS05480
AL543_RS05490	PF06769	Plasmid encoded toxin Txe
AL543_RS05495	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
AL543_RS05500	PF05016	Plasmid stabilisation system protein
AL543_RS05505	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
AL543_RS05510	PF07362	Post-segregation antitoxin CcdA
AL543_RS05515	PF01845	CcdB protein
AL543_RS05520	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL543_RS05525	PF04266	ASCH domain
AL543_RS05535	PF04875	AL543_RS05535
AL543_RS05550	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
AL543_RS05560	PF12681	Glyoxalase-like domain
AL543_RS05565	PF04229	GrpB protein
AL543_RS05570	PF04875	AL543_RS05570
AL543_RS05575	PF13302	Acetyltransferase (GNAT) domain
AL543_RS05585	PF03235	AL543_RS05585
AL543_RS05585	PF07510	AL543_RS05585
AL543_RS05605	PF13302	Acetyltransferase (GNAT) domain
AL543_RS05625	PF00589	Phage integrase family
AL543_RS05625	PF13495	Phage integrase, N-terminal SAM-like domain
AL543_RS05630	PF01797	Transposase IS200 like
AL543_RS05635	PF00453	Ribosomal protein L20
AL543_RS05640	PF01632	Ribosomal protein L35
AL543_RS05645	PF00707	Translation initiation factor IF-3, C-terminal domain
AL543_RS05645	PF05198	Translation initiation factor IF-3, N-terminal domain
AL543_RS05650	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
AL543_RS05650	PF02824	TGS domain
AL543_RS05650	PF03129	Anticodon binding domain
AL543_RS05650	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
AL543_RS05655	PF01571	Aminomethyltransferase folate-binding domain
AL543_RS05655	PF08669	Glycine cleavage T-protein C-terminal barrel domain
AL543_RS05660	PF01381	Helix-turn-helix
AL543_RS05660	PF07883	Cupin domain
AL543_RS05665	PF00464	Serine hydroxymethyltransferase
AL543_RS05670	PF01597	Glycine cleavage H-protein
AL543_RS05675	PF02347	Glycine cleavage system P-protein
AL543_RS05680	PF13472	GDSL-like Lipase/Acylhydrolase family
AL543_RS05685	PF00194	Eukaryotic-type carbonic anhydrase
AL543_RS05700	PF00768	D-alanyl-D-alanine carboxypeptidase
AL543_RS05700	PF07943	Penicillin-binding protein 5, C-terminal domain
AL543_RS05705	PF01614	Bacterial transcriptional regulator
AL543_RS05705	PF09339	IclR helix-turn-helix domain
AL543_RS05710	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS05715	PF00005	ABC transporter
AL543_RS05715	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL543_RS05720	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS05720	PF12911	AL543_RS05720
AL543_RS05725	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS05730	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL543_RS05735	PF10022	AL543_RS05735
AL543_RS05740	PF04055	Radical SAM superfamily
AL543_RS05740	PF13186	Iron-sulfur cluster-binding domain
AL543_RS05745	PF00884	Sulfatase
AL543_RS05750	PF00884	Sulfatase
AL543_RS05750	PF16385	AL543_RS05750
AL543_RS05755	PF00990	GGDEF domain
AL543_RS05760	PF02278	Polysaccharide lyase family 8, super-sandwich domain
AL543_RS05760	PF02884	Polysaccharide lyase family 8, C-terminal beta-sandwich domain
AL543_RS05760	PF08124	Polysaccharide lyase family 8, N terminal alpha-helical domain
AL543_RS05765	PF09508	Lacto-N-biose phosphorylase
AL543_RS05770	PF07470	Glycosyl Hydrolase Family 88
AL543_RS05775	PF13561	Enoyl-(Acyl carrier protein) reductase
AL543_RS05780	PF01087	Galactose-1-phosphate uridyl transferase, N-terminal domain
AL543_RS05780	PF02744	Galactose-1-phosphate uridyl transferase, C-terminal domain
AL543_RS05785	PF01081	KDPG and KHG aldolase
AL543_RS05790	PF00294	pfkB family carbohydrate kinase
AL543_RS05795	PF04962	KduI/IolB family
AL543_RS05800	PF03573	outer membrane porin, OprD family
AL543_RS05805	PF00491	Arginase family
AL543_RS05810	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
AL543_RS05810	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
AL543_RS05815	PF12625	AL543_RS05815
AL543_RS05815	PF12833	Helix-turn-helix domain
AL543_RS05825	PF13533	Biotin-lipoyl like
AL543_RS05830	PF00924	Mechanosensitive ion channel
AL543_RS05835	PF01769	Divalent cation transporter
AL543_RS05835	PF03448	MgtE intracellular N domain
AL543_RS05840	PF00696	Amino acid kinase family
AL543_RS05845	PF06339	AL543_RS05845
AL543_RS05850	PF00202	Aminotransferase class-III
AL543_RS05855	PF00583	Acetyltransferase (GNAT) family
AL543_RS05860	PF06445	GyrI-like small molecule binding domain
AL543_RS05860	PF12833	Helix-turn-helix domain
AL543_RS05865	PF02311	AraC-like ligand binding domain
AL543_RS05865	PF12833	Helix-turn-helix domain
AL543_RS05870	PF01554	MatE
AL543_RS05875	PF13505	Outer membrane protein beta-barrel domain
AL543_RS05880	PF01329	Pterin 4 alpha carbinolamine dehydratase
AL543_RS05885	PF00351	Biopterin-dependent aromatic amino acid hydroxylase
AL543_RS05890	PF00501	AMP-binding enzyme
AL543_RS05890	PF13193	AMP-binding enzyme C-terminal domain
AL543_RS05895	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS05895	PF03466	LysR substrate binding domain
AL543_RS05905	PF13489	Methyltransferase domain
AL543_RS05915	PF00132	Bacterial transferase hexapeptide (six repeats)
AL543_RS05915	PF12464	Maltose acetyltransferase
AL543_RS05915	PF14602	Hexapeptide repeat of succinyl-transferase
AL543_RS05920	PF01595	AL543_RS05920
AL543_RS05920	PF03471	Transporter associated domain
AL543_RS05925	PF02566	OsmC-like protein
AL543_RS05930	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
AL543_RS05935	PF00563	EAL domain
AL543_RS05935	PF00990	GGDEF domain
AL543_RS05940	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AL543_RS05940	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
AL543_RS05950	PF01810	AL543_RS05950
AL543_RS05955	PF13520	Amino acid permease
AL543_RS05960	PF00990	GGDEF domain
AL543_RS05970	PF00072	Response regulator receiver domain
AL543_RS05970	PF04397	LytTr DNA-binding domain
AL543_RS05975	PF06580	AL543_RS05975
AL543_RS05985	PF17131	AL543_RS05985
AL543_RS05990	PF02687	AL543_RS05990
AL543_RS05990	PF12704	MacB-like periplasmic core domain
AL543_RS05995	PF00005	ABC transporter
AL543_RS06005	PF00248	Aldo/keto reductase family
AL543_RS06010	PF00128	Alpha amylase, catalytic domain
AL543_RS06015	PF13358	DDE superfamily endonuclease
AL543_RS06015	PF13551	Winged helix-turn helix
AL543_RS06015	PF13592	AL543_RS06015
AL543_RS06025	PF08447	PAS fold
AL543_RS06025	PF08448	PAS fold
AL543_RS06025	PF13185	GAF domain
AL543_RS06030	PF01609	Transposase DDE domain
AL543_RS06035	PF00990	GGDEF domain
AL543_RS06040	PF01447	Thermolysin metallopeptidase, catalytic domain
AL543_RS06040	PF02868	Thermolysin metallopeptidase, alpha-helical domain
AL543_RS06040	PF03413	Peptidase propeptide and YPEB domain
AL543_RS06040	PF04151	Bacterial pre-peptidase C-terminal domain
AL543_RS06040	PF07504	Fungalysin/Thermolysin Propeptide Motif
AL543_RS06050	PF03922	OmpW family
AL543_RS06060	PF00768	D-alanyl-D-alanine carboxypeptidase
AL543_RS06165	PF07669	Eco57I restriction-modification methylase
AL543_RS06330	PF00145	C-5 cytosine-specific DNA methylase
AL543_RS06610	PF00175	Oxidoreductase NAD-binding domain
AL543_RS06610	PF00970	Oxidoreductase FAD-binding domain
AL543_RS06925	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
AL543_RS06925	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
AL543_RS06925	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
AL543_RS07050	PF13520	Amino acid permease
AL543_RS07100	PF00672	HAMP domain
AL543_RS07135	PF01619	Proline dehydrogenase
AL543_RS07135	PF14850	DNA-binding domain of Proline dehydrogenase
AL543_RS07245	PF00072	Response regulator receiver domain
AL543_RS07245	PF07228	Stage II sporulation protein E (SpoIIE)
AL543_RS07345	PF00884	Sulfatase
AL543_RS07835	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS08025	PF08125	Mannitol dehydrogenase C-terminal domain
AL543_RS08125	PF07148	AL543_RS08125
AL543_RS08220	PF00375	Sodium:dicarboxylate symporter family
AL543_RS08345	PF09850	Uncharacterized protein conserved in bacteria (DUF2077)
AL543_RS08365	PF00158	Sigma-54 interaction domain
AL543_RS08460	PF03009	Glycerophosphoryl diester phosphodiesterase family
AL543_RS08695	PF01773	Na+ dependent nucleoside transporter N-terminus
AL543_RS08695	PF07662	Na+ dependent nucleoside transporter C-terminus
AL543_RS08695	PF07670	Nucleoside recognition
AL543_RS09090	PF05547	AL543_RS09090
AL543_RS09225	PF13358	DDE superfamily endonuclease
AL543_RS09275	PF00873	AcrB/AcrD/AcrF family
AL543_RS09295	PF16576	AL543_RS09295
AL543_RS09305	PF02321	Outer membrane efflux protein
AL543_RS09500	PF03222	Tryptophan/tyrosine permease family
AL543_RS09525	PF01212	Beta-eliminating lyase
AL543_RS09720	PF00512	His Kinase A (phospho-acceptor) domain
AL543_RS09785	PF00580	UvrD/REP helicase N-terminal domain
AL543_RS09785	PF12462	AL543_RS09785
AL543_RS09790	PF00580	UvrD/REP helicase N-terminal domain
AL543_RS09930	PF00704	Glycosyl hydrolases family 18
AL543_RS10745	PF00501	AMP-binding enzyme
AL543_RS10745	PF08415	AL543_RS10745
AL543_RS10760	PF00593	TonB dependent receptor
AL543_RS10950	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL543_RS10980	PF02163	Peptidase family M50
AL543_RS12220	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
AL543_RS12220	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
AL543_RS12300	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS12300	PF03466	LysR substrate binding domain
AL543_RS12380	PF00353	Hemolysin-type calcium-binding repeat (2 copies)
AL543_RS12495	PF08447	PAS fold
AL543_RS12510	PF01447	Thermolysin metallopeptidase, catalytic domain
AL543_RS12510	PF02868	Thermolysin metallopeptidase, alpha-helical domain
AL543_RS12510	PF04151	Bacterial pre-peptidase C-terminal domain
AL543_RS12560	PF01103	Surface antigen
AL543_RS12560	PF07244	Surface antigen variable number repeat
AL543_RS12575	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
AL543_RS12575	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal
AL543_RS12630	PF00925	GTP cyclohydrolase II
AL543_RS12650	PF00696	Amino acid kinase family
AL543_RS12770	PF05175	Methyltransferase small domain
AL543_RS12770	PF08468	Methyltransferase small domain N-terminal
AL543_RS12920	PF08443	RimK-like ATP-grasp domain
AL543_RS12920	PF14401	AL543_RS12920
AL543_RS12985	PF00501	AMP-binding enzyme
AL543_RS13020	PF07238	PilZ domain
AL543_RS13025	PF07238	PilZ domain
AL543_RS13180	PF01645	Conserved region in glutamate synthase
AL543_RS13255	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AL543_RS13320	PF02875	Mur ligase family, glutamate ligase domain
AL543_RS13320	PF08245	Mur ligase middle domain
AL543_RS13410	PF00456	Transketolase, thiamine diphosphate binding domain
AL543_RS13510	PF00204	DNA gyrase B
AL543_RS13510	PF01751	Toprim domain
AL543_RS13840	PF00180	Isocitrate/isopropylmalate dehydrogenase
AL543_RS13905	PF01966	HD domain
AL543_RS13905	PF11871	AL543_RS13905
AL543_RS13955	PF05987	AL543_RS13955
AL543_RS14210	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AL543_RS14210	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
AL543_RS14320	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AL543_RS14365	PF00171	Aldehyde dehydrogenase family
AL543_RS14525	PF01118	Semialdehyde dehydrogenase, NAD binding domain
AL543_RS14525	PF02774	Semialdehyde dehydrogenase, dimerisation domain
AL543_RS14550	PF03551	Transcriptional regulator PadR-like family
AL543_RS14810	PF02080	TrkA-C domain
AL543_RS14825	PF00474	Sodium:solute symporter family
AL543_RS14840	PF04607	Region found in RelA / SpoT proteins
AL543_RS14840	PF13328	HD domain
AL543_RS15235	PF12008	Type I restriction and modification enzyme - subunit R C terminal
AL543_RS15440	PF01612	3'-5' exonuclease
AL543_RS15595	PF01609	Transposase DDE domain
AL543_RS15690	PF00557	Metallopeptidase family M24
AL543_RS15690	PF16189	AL543_RS15690
AL543_RS15740	PF00589	Phage integrase family
AL543_RS16015	PF02092	AL543_RS16015
AL543_RS16240	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS16350	PF00580	UvrD/REP helicase N-terminal domain
AL543_RS16350	PF13361	UvrD-like helicase C-terminal domain
AL543_RS16435	PF01032	FecCD transport family
AL543_RS16525	PF01609	Transposase DDE domain
AL543_RS16650	PF00535	Glycosyl transferase family 2
AL543_RS16725	PF01808	AICARFT/IMPCHase bienzyme
AL543_RS16725	PF02142	MGS-like domain
AL543_RS16855	PF02541	Ppx/GppA phosphatase family
AL543_RS16875	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AL543_RS17020	PF04998	RNA polymerase Rpb1, domain 5
AL543_RS17100	PF01476	LysM domain
AL543_RS17100	PF01520	N-acetylmuramoyl-L-alanine amidase
AL543_RS17100	PF11741	AMIN domain
AL543_RS17370	PF00563	EAL domain
AL543_RS17445	PF10150	Ribonuclease E/G family
AL543_RS17455	PF13116	AL543_RS17455
AL543_RS17490	PF03063	Prismane/CO dehydrogenase family
AL543_RS17660	PF11873	Domain of unknown function (DUF3393)
AL543_RS17730	PF00579	tRNA synthetases class I (W and Y)
AL543_RS17730	PF01479	S4 domain
AL543_RS17780	PF00593	TonB dependent receptor
AL543_RS17795	PF00162	Phosphoglycerate kinase
AL543_RS17815	PF01797	Transposase IS200 like
AL543_RS17960	PF01411	tRNA synthetases class II (A)
AL543_RS17965	PF01411	tRNA synthetases class II (A)
AL543_RS17970	PF01411	tRNA synthetases class II (A)
AL543_RS18000	PF03977	AL543_RS18000
AL543_RS18180	PF04408	Helicase associated domain (HA2)
AL543_RS18180	PF08482	AL543_RS18180
AL543_RS18285	PF00672	HAMP domain
AL543_RS18415	PF02576	Uncharacterised BCR, YhbC family COG0779
AL543_RS18570	PF00303	Thymidylate synthase
AL543_RS18820	PF01738	Dienelactone hydrolase family
AL543_RS19020	PF12404	AL543_RS19020
AL543_RS19120	PF00580	UvrD/REP helicase N-terminal domain
AL543_RS19380	PF01609	Transposase DDE domain
AL543_RS19605	PF02779	Transketolase, pyrimidine binding domain
AL543_RS19605	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
AL543_RS19950	PF00905	Penicillin binding protein transpeptidase domain
AL543_RS19950	PF03717	Penicillin-binding Protein dimerisation domain
AL543_RS20055	PF01653	NAD-dependent DNA ligase adenylation domain