AL543_RS00010	PF00884	Sulfatase
AL543_RS00015	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS00015	PF03466	LysR substrate binding domain
AL543_RS00020	PF07690	Major Facilitator Superfamily
AL543_RS00030	PF01717	Cobalamin-independent synthase, Catalytic domain
AL543_RS00040	PF13358	DDE superfamily endonuclease
AL543_RS00040	PF13384	Homeodomain-like domain
AL543_RS00040	PF13592	AL543_RS00040
AL543_RS00055	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS00055	PF13682	Chemoreceptor zinc-binding domain
AL543_RS00075	PF01551	Peptidase family M23
AL543_RS00090	PF00455	AL543_RS00090
AL543_RS00090	PF08220	DeoR-like helix-turn-helix domain
AL543_RS00095	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AL543_RS00095	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
AL543_RS00100	PF07005	Protein of unknown function, DUF1537
AL543_RS00100	PF17042	AL543_RS00100
AL543_RS00105	PF00596	Class II Aldolase and Adducin N-terminal domain
AL543_RS00110	PF01261	Xylose isomerase-like TIM barrel
AL543_RS00115	PF01370	NAD dependent epimerase/dehydratase family
AL543_RS00120	PF02447	AL543_RS00120
AL543_RS00155	PF09327	AL543_RS00155
AL543_RS00190	PF13252	AL543_RS00190
AL543_RS00215	PF05838	Glycosyl hydrolase 108
AL543_RS00215	PF09374	Predicted Peptidoglycan domain
AL543_RS00220	PF16083	AL543_RS00220
AL543_RS00225	PF00145	C-5 cytosine-specific DNA methylase
AL543_RS00235	PF13245	Part of AAA domain
AL543_RS00240	PF09369	AL543_RS00240
AL543_RS00245	PF00271	Helicase conserved C-terminal domain
AL543_RS00270	PF13730	AL543_RS00270
AL543_RS00280	PF14549	DNA-binding transcriptional regulator Cro
AL543_RS00285	PF00717	Peptidase S24-like
AL543_RS00285	PF01381	Helix-turn-helix
AL543_RS00300	PF00589	Phage integrase family
AL543_RS00300	PF02899	Phage integrase, N-terminal SAM-like domain
AL543_RS00300	PF12167	AL543_RS00300
AL543_RS00305	PF15969	AL543_RS00305
AL543_RS00320	PF00107	Zinc-binding dehydrogenase
AL543_RS00320	PF08240	Alcohol dehydrogenase GroES-like domain
AL543_RS00325	PF00155	Aminotransferase class I and II
AL543_RS00330	PF01053	Cys/Met metabolism PLP-dependent enzyme
AL543_RS00335	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS00335	PF03466	LysR substrate binding domain
AL543_RS00340	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL543_RS00345	PF03929	AL543_RS00345
AL543_RS00355	PF00072	Response regulator receiver domain
AL543_RS00355	PF00990	GGDEF domain
AL543_RS00360	PF00072	Response regulator receiver domain
AL543_RS00360	PF00512	His Kinase A (phospho-acceptor) domain
AL543_RS00360	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS00360	PF03924	CHASE domain
AL543_RS00360	PF13426	PAS domain
AL543_RS00365	PF07361	Cytochrome b562
AL543_RS00375	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
AL543_RS00375	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
AL543_RS00380	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
AL543_RS00385	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
AL543_RS00385	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AL543_RS00405	PF02595	Glycerate kinase family
AL543_RS00410	PF02447	AL543_RS00410
AL543_RS00415	PF05651	AL543_RS00415
AL543_RS00415	PF13556	PucR C-terminal helix-turn-helix domain
AL543_RS00420	PF00034	Cytochrome c
AL543_RS00420	PF03150	Di-haem cytochrome c peroxidase
AL543_RS00425	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS00430	PF01243	Pyridoxamine 5'-phosphate oxidase
AL543_RS00435	PF06228	Haem utilisation ChuX/HutX
AL543_RS00440	PF04055	Radical SAM superfamily
AL543_RS00445	PF03544	Gram-negative bacterial TonB protein C-terminal
AL543_RS00450	PF01618	AL543_RS00450
AL543_RS00455	PF02472	Biopolymer transport protein ExbD/TolR
AL543_RS00460	PF01497	Periplasmic binding protein
AL543_RS00465	PF01032	FecCD transport family
AL543_RS00470	PF00005	ABC transporter
AL543_RS00475	PF00440	Bacterial regulatory proteins, tetR family
AL543_RS00480	PF04175	Protein of unknown function (DUF406)
AL543_RS00495	PF01553	Acyltransferase
AL543_RS00505	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS00505	PF00672	HAMP domain
AL543_RS00505	PF02743	Cache domain
AL543_RS00510	PF00111	2Fe-2S iron-sulfur cluster binding domain
AL543_RS00510	PF00175	Oxidoreductase NAD-binding domain
AL543_RS00510	PF00970	Oxidoreductase FAD-binding domain
AL543_RS00510	PF03473	MOSC domain
AL543_RS00510	PF03476	MOSC N-terminal beta barrel domain
AL543_RS00515	PF01979	Amidohydrolase family
AL543_RS00525	PF13358	DDE superfamily endonuclease
AL543_RS00525	PF13551	Winged helix-turn helix
AL543_RS00525	PF13592	AL543_RS00525
AL543_RS00535	PF05656	AL543_RS00535
AL543_RS00545	PF05958	tRNA (Uracil-5-)-methyltransferase
AL543_RS00550	PF05661	AL543_RS00550
AL543_RS00555	PF00005	ABC transporter
AL543_RS00555	PF12848	ABC transporter
AL543_RS00565	PF13487	HD domain
AL543_RS00570	PF00313	'Cold-shock' DNA-binding domain
AL543_RS00585	PF04952	Succinylglutamate desuccinylase / Aspartoacylase family
AL543_RS00590	PF02311	AraC-like ligand binding domain
AL543_RS00590	PF12833	Helix-turn-helix domain
AL543_RS00595	PF00892	EamA-like transporter family
AL543_RS00600	PF00990	GGDEF domain
AL543_RS00600	PF08448	PAS fold
AL543_RS00605	PF00455	AL543_RS00605
AL543_RS00605	PF08220	DeoR-like helix-turn-helix domain
AL543_RS00610	PF03061	Thioesterase superfamily
AL543_RS00615	PF00149	Calcineurin-like phosphoesterase
AL543_RS00615	PF02872	5'-nucleotidase, C-terminal domain
AL543_RS00630	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS00635	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS00635	PF14785	Maltose transport system permease protein MalF P2 domain
AL543_RS00640	PF13416	Bacterial extracellular solute-binding protein
AL543_RS00645	PF00005	ABC transporter
AL543_RS00645	PF08402	TOBE domain
AL543_RS00650	PF13302	Acetyltransferase (GNAT) domain
AL543_RS00655	PF07073	Modulator of Rho-dependent transcription termination (ROF)
AL543_RS00660	PF13640	2OG-Fe(II) oxygenase superfamily
AL543_RS00665	PF01906	Putative heavy-metal-binding
AL543_RS00670	PF00196	Bacterial regulatory proteins, luxR family
AL543_RS00680	PF01609	Transposase DDE domain
AL543_RS00685	PF00882	Zinc dependent phospholipase C
AL543_RS00695	PF13616	PPIC-type PPIASE domain
AL543_RS00700	PF00072	Response regulator receiver domain
AL543_RS00700	PF01584	CheW-like domain
AL543_RS00705	PF01047	MarR family
AL543_RS00710	PF00990	GGDEF domain
AL543_RS00720	PF01381	Helix-turn-helix
AL543_RS00720	PF12268	AL543_RS00720
AL543_RS00725	PF00990	GGDEF domain
AL543_RS00725	PF03924	CHASE domain
AL543_RS00730	PF13532	2OG-Fe(II) oxygenase superfamily
AL543_RS00735	PF12060	AL543_RS00735
AL543_RS00740	PF00892	EamA-like transporter family
AL543_RS00745	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS00745	PF03466	LysR substrate binding domain
AL543_RS00750	PF00990	GGDEF domain
AL543_RS00760	PF02678	Pirin
AL543_RS00760	PF05726	Pirin C-terminal cupin domain
AL543_RS00765	PF06865	Protein of unknown function (DUF1255)
AL543_RS00770	PF11012	AL543_RS00770
AL543_RS00775	PF07690	Major Facilitator Superfamily
AL543_RS00780	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS00780	PF00672	HAMP domain
AL543_RS00785	PF05362	Lon protease (S16) C-terminal proteolytic domain
AL543_RS00785	PF13654	AAA domain
AL543_RS00795	PF00005	ABC transporter
AL543_RS00795	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL543_RS00800	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS00800	PF03466	LysR substrate binding domain
AL543_RS00805	PF02652	AL543_RS00805
AL543_RS00810	PF01070	FMN-dependent dehydrogenase
AL543_RS00815	PF01565	FAD binding domain
AL543_RS00815	PF02754	AL543_RS00815
AL543_RS00815	PF02913	FAD linked oxidases, C-terminal domain
AL543_RS00815	PF13183	4Fe-4S dicluster domain
AL543_RS00820	PF01609	Transposase DDE domain
AL543_RS00820	PF13006	AL543_RS00820
AL543_RS00825	PF03618	AL543_RS00825
AL543_RS00830	PF00391	PEP-utilising enzyme, mobile domain
AL543_RS00830	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
AL543_RS00830	PF02896	PEP-utilising enzyme, TIM barrel domain
AL543_RS00835	PF07228	Stage II sporulation protein E (SpoIIE)
AL543_RS00840	PF13581	Histidine kinase-like ATPase domain
AL543_RS00855	PF01470	Pyroglutamyl peptidase
AL543_RS00860	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS00860	PF08447	PAS fold
AL543_RS00865	PF01554	MatE
AL543_RS00870	PF01797	Transposase IS200 like
AL543_RS00875	PF00793	DAHP synthetase I family
AL543_RS00880	PF00005	ABC transporter
AL543_RS00885	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS00890	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL543_RS00895	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS00900	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
AL543_RS00900	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
AL543_RS00900	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
AL543_RS00900	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
AL543_RS00905	PF04519	AL543_RS00905
AL543_RS00910	PF01551	Peptidase family M23
AL543_RS00915	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL543_RS00915	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL543_RS00915	PF02378	Phosphotransferase system, EIIC
AL543_RS00920	PF01232	Mannitol dehydrogenase Rossmann domain
AL543_RS00920	PF08125	Mannitol dehydrogenase C-terminal domain
AL543_RS00925	PF05068	Mannitol repressor
AL543_RS00930	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
AL543_RS00935	PF00753	Metallo-beta-lactamase superfamily
AL543_RS00945	PF03733	AL543_RS00945
AL543_RS00955	PF03358	NADPH-dependent FMN reductase
AL543_RS00960	PF00892	EamA-like transporter family
AL543_RS00965	PF12802	MarR family
AL543_RS00970	PF00581	Rhodanese-like domain
AL543_RS00975	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS00975	PF03466	LysR substrate binding domain
AL543_RS00980	PF03358	NADPH-dependent FMN reductase
AL543_RS00985	PF13743	Thioredoxin
AL543_RS00990	PF08240	Alcohol dehydrogenase GroES-like domain
AL543_RS00990	PF13602	Zinc-binding dehydrogenase
AL543_RS00995	PF00892	EamA-like transporter family
AL543_RS01000	PF13460	NADH(P)-binding
AL543_RS01005	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS01005	PF03466	LysR substrate binding domain
AL543_RS01015	PF13358	DDE superfamily endonuclease
AL543_RS01015	PF13384	Homeodomain-like domain
AL543_RS01015	PF13592	AL543_RS01015
AL543_RS01020	PF00106	short chain dehydrogenase
AL543_RS01025	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS01025	PF03466	LysR substrate binding domain
AL543_RS01030	PF00579	tRNA synthetases class I (W and Y)
AL543_RS01035	PF04013	Putative SAM-dependent RNA methyltransferase
AL543_RS01045	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
AL543_RS01055	PF13520	Amino acid permease
AL543_RS01060	PF01276	Orn/Lys/Arg decarboxylase, major domain
AL543_RS01060	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
AL543_RS01060	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
AL543_RS01065	PF10940	AL543_RS01065
AL543_RS01075	PF01609	Transposase DDE domain
AL543_RS01080	PF00196	Bacterial regulatory proteins, luxR family
AL543_RS01085	PF03176	MMPL family
AL543_RS01090	PF17131	AL543_RS01090
AL543_RS01100	PF00171	Aldehyde dehydrogenase family
AL543_RS01105	PF01037	AsnC family
AL543_RS01105	PF13412	Winged helix-turn-helix DNA-binding
AL543_RS01110	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS01110	PF00672	HAMP domain
AL543_RS01110	PF02743	Cache domain
AL543_RS01120	PF00474	Sodium:solute symporter family
AL543_RS01130	PF00171	Aldehyde dehydrogenase family
AL543_RS01130	PF01619	Proline dehydrogenase
AL543_RS01130	PF14850	DNA-binding domain of Proline dehydrogenase
AL543_RS01135	PF02311	AraC-like ligand binding domain
AL543_RS01135	PF12833	Helix-turn-helix domain
AL543_RS01140	PF08308	AL543_RS01140
AL543_RS01145	PF03781	Sulfatase-modifying factor enzyme 1
AL543_RS01145	PF08308	AL543_RS01145
AL543_RS01150	PF00196	Bacterial regulatory proteins, luxR family
AL543_RS01150	PF08448	PAS fold
AL543_RS01155	PF01243	Pyridoxamine 5'-phosphate oxidase
AL543_RS01155	PF10590	Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
AL543_RS01160	PF13437	HlyD family secretion protein
AL543_RS01160	PF13533	Biotin-lipoyl like
AL543_RS01165	PF06035	Bacterial transglutaminase-like cysteine proteinase BTLCP
AL543_RS01170	PF00563	EAL domain
AL543_RS01170	PF00990	GGDEF domain
AL543_RS01170	PF16448	AL543_RS01170
AL543_RS01175	PF00005	ABC transporter
AL543_RS01175	PF00664	ABC transporter transmembrane region
AL543_RS01190	PF07971	Glycosyl hydrolase family 92
AL543_RS01195	PF03961	AL543_RS01195
AL543_RS01200	PF00072	Response regulator receiver domain
AL543_RS01200	PF07228	Stage II sporulation protein E (SpoIIE)
AL543_RS01200	PF13581	Histidine kinase-like ATPase domain
AL543_RS01205	PF01740	STAS domain
AL543_RS01210	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS01215	PF00072	Response regulator receiver domain
AL543_RS01215	PF01339	CheB methylesterase
AL543_RS01220	PF03975	CheD chemotactic sensory transduction
AL543_RS01225	PF01739	CheR methyltransferase, SAM binding domain
AL543_RS01225	PF03705	CheR methyltransferase, all-alpha domain
AL543_RS01230	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS01230	PF00672	HAMP domain
AL543_RS01230	PF13188	PAS domain
AL543_RS01230	PF13426	PAS domain
AL543_RS01235	PF01584	CheW-like domain
AL543_RS01240	PF01584	CheW-like domain
AL543_RS01245	PF01584	CheW-like domain
AL543_RS01245	PF01627	Hpt domain
AL543_RS01245	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS01245	PF02895	Signal transducing histidine kinase, homodimeric domain
AL543_RS01250	PF00072	Response regulator receiver domain
AL543_RS01255	PF13466	STAS domain
AL543_RS01260	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL543_RS01265	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS01270	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS01275	PF00005	ABC transporter
AL543_RS01280	PF00884	Sulfatase
AL543_RS01280	PF08019	AL543_RS01280
AL543_RS01285	PF01797	Transposase IS200 like
AL543_RS01290	PF00512	His Kinase A (phospho-acceptor) domain
AL543_RS01290	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS01290	PF08521	AL543_RS01290
AL543_RS01295	PF00072	Response regulator receiver domain
AL543_RS01295	PF00486	Transcriptional regulatory protein, C terminal
AL543_RS01300	PF14559	Tetratricopeptide repeat
AL543_RS01305	PF00106	short chain dehydrogenase
AL543_RS01310	PF14518	Iron-containing redox enzyme
AL543_RS01315	PF00501	AMP-binding enzyme
AL543_RS01320	PF12261	AL543_RS01320
AL543_RS01325	PF05127	Helicase
AL543_RS01325	PF13718	GNAT acetyltransferase 2
AL543_RS01330	PF13416	Bacterial extracellular solute-binding protein
AL543_RS01335	PF02195	ParB-like nuclease domain
AL543_RS01340	PF13614	AAA domain
AL543_RS01350	PF11826	AL543_RS01350
AL543_RS01365	PF11686	AL543_RS01365
AL543_RS01370	PF01709	Transcriptional regulator
AL543_RS01375	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AL543_RS01375	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
AL543_RS01385	PF10928	Protein of unknown function (DUF2810)
AL543_RS01390	PF00196	Bacterial regulatory proteins, luxR family
AL543_RS01395	PF00343	Carbohydrate phosphorylase
AL543_RS01400	PF02446	4-alpha-glucanotransferase
AL543_RS01405	PF00128	Alpha amylase, catalytic domain
AL543_RS01405	PF02806	Alpha amylase, C-terminal all-beta domain
AL543_RS01405	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
AL543_RS01410	PF05638	Protein of unknown function (DUF796)
AL543_RS01415	PF05954	Phage late control gene D protein (GPD)
AL543_RS01420	PF13503	AL543_RS01420
AL543_RS01435	PF01124	MAPEG family
AL543_RS01440	PF01757	AL543_RS01440
AL543_RS01445	PF03547	AL543_RS01445
AL543_RS01450	PF00939	Sodium:sulfate symporter transmembrane region
AL543_RS01455	PF09829	AL543_RS01455
AL543_RS01460	PF00704	Glycosyl hydrolases family 18
AL543_RS01460	PF02010	AL543_RS01460
AL543_RS01460	PF08329	Chitinase A, N-terminal domain
AL543_RS01465	PF01614	Bacterial transcriptional regulator
AL543_RS01465	PF09339	IclR helix-turn-helix domain
AL543_RS01470	PF00491	Arginase family
AL543_RS01475	PF05787	Bacterial protein of unknown function (DUF839)
AL543_RS01480	PF08668	HDOD domain
AL543_RS01485	PF01569	PAP2 superfamily
AL543_RS01490	PF02225	PA domain
AL543_RS01490	PF04389	Peptidase family M28
AL543_RS01495	PF00375	Sodium:dicarboxylate symporter family
AL543_RS01500	PF04314	Protein of unknown function (DUF461)
AL543_RS01505	PF02630	SCO1/SenC
AL543_RS01515	PF04018	AL543_RS01515
AL543_RS01525	PF03616	AL543_RS01525
AL543_RS01530	PF07238	PilZ domain
AL543_RS01530	PF12945	Flagellar protein YcgR
AL543_RS01535	PF14542	GCN5-related N-acetyl-transferase
AL543_RS01540	PF13443	Cro/C1-type HTH DNA-binding domain
AL543_RS01545	PF11188	AL543_RS01545
AL543_RS01550	PF03572	Peptidase family S41
AL543_RS01550	PF07676	WD40-like Beta Propeller Repeat
AL543_RS01550	PF14684	Tricorn protease C1 domain
AL543_RS01555	PF13533	Biotin-lipoyl like
AL543_RS01560	PF11742	AL543_RS01560
AL543_RS01565	PF00990	GGDEF domain
AL543_RS01580	PF01048	Phosphorylase superfamily
AL543_RS01590	PF04463	AL543_RS01590
AL543_RS01590	PF08349	AL543_RS01590
AL543_RS01595	PF13411	MerR HTH family regulatory protein
AL543_RS01600	PF00875	DNA photolyase
AL543_RS01600	PF03441	FAD binding domain of DNA photolyase
AL543_RS01605	PF01476	LysM domain
AL543_RS01605	PF03734	L,D-transpeptidase catalytic domain
AL543_RS01610	PF04728	Lipoprotein leucine-zipper
AL543_RS01615	PF00270	DEAD/DEAH box helicase
AL543_RS01615	PF00271	Helicase conserved C-terminal domain
AL543_RS01620	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS01620	PF00672	HAMP domain
AL543_RS01625	PF12849	PBP superfamily domain
AL543_RS01630	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS01635	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS01640	PF00005	ABC transporter
AL543_RS01645	PF00990	GGDEF domain
AL543_RS01650	PF00174	Oxidoreductase molybdopterin binding domain
AL543_RS01655	PF07670	Nucleoside recognition
AL543_RS01660	PF00916	AL543_RS01660
AL543_RS01660	PF01740	STAS domain
AL543_RS01670	PF01551	Peptidase family M23
AL543_RS01670	PF04225	Opacity-associated protein A LysM-like domain
AL543_RS01675	PF00563	EAL domain
AL543_RS01675	PF00990	GGDEF domain
AL543_RS01680	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS01680	PF03466	LysR substrate binding domain
AL543_RS01685	PF07690	Major Facilitator Superfamily
AL543_RS01690	PF13411	MerR HTH family regulatory protein
AL543_RS01695	PF13358	DDE superfamily endonuclease
AL543_RS01695	PF13551	Winged helix-turn helix
AL543_RS01695	PF13592	AL543_RS01695
AL543_RS01715	PF01039	Carboxyl transferase domain
AL543_RS01730	PF00462	Glutaredoxin
AL543_RS01735	PF00892	EamA-like transporter family
AL543_RS01740	PF13609	Gram-negative porin
AL543_RS01745	PF02566	OsmC-like protein
AL543_RS01750	PF01047	MarR family
AL543_RS01755	PF01557	Fumarylacetoacetate (FAA) hydrolase family
AL543_RS01760	PF05437	AL543_RS01760
AL543_RS01765	PF03591	AL543_RS01765
AL543_RS01770	PF02311	AraC-like ligand binding domain
AL543_RS01770	PF12833	Helix-turn-helix domain
AL543_RS01775	PF01810	AL543_RS01775
AL543_RS01785	PF00005	ABC transporter
AL543_RS01785	PF00664	ABC transporter transmembrane region
AL543_RS01790	PF02274	Amidinotransferase
AL543_RS01795	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
AL543_RS01800	PF04399	Glutaredoxin 2, C terminal domain
AL543_RS01800	PF13417	Glutathione S-transferase, N-terminal domain
AL543_RS01805	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS01805	PF03466	LysR substrate binding domain
AL543_RS01810	PF10688	AL543_RS01810
AL543_RS01815	PF01081	KDPG and KHG aldolase
AL543_RS01820	PF00294	pfkB family carbohydrate kinase
AL543_RS01825	PF02614	Glucuronate isomerase
AL543_RS01830	PF01232	Mannitol dehydrogenase Rossmann domain
AL543_RS01830	PF08125	Mannitol dehydrogenase C-terminal domain
AL543_RS01835	PF06808	AL543_RS01835
AL543_RS01840	PF04290	AL543_RS01840
AL543_RS01845	PF03480	Bacterial extracellular solute-binding protein, family 7
AL543_RS01850	PF00392	Bacterial regulatory proteins, gntR family
AL543_RS01850	PF07729	FCD domain
AL543_RS01855	PF03786	D-mannonate dehydratase (UxuA)
AL543_RS01860	PF00270	DEAD/DEAH box helicase
AL543_RS01860	PF00271	Helicase conserved C-terminal domain
AL543_RS01875	PF12833	Helix-turn-helix domain
AL543_RS01875	PF12852	Cupin
AL543_RS01880	PF00462	Glutaredoxin
AL543_RS01885	PF04224	AL543_RS01885
AL543_RS01890	PF11730	AL543_RS01890
AL543_RS01895	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS01895	PF12729	AL543_RS01895
AL543_RS01900	PF01547	Bacterial extracellular solute-binding protein
AL543_RS01905	PF01797	Transposase IS200 like
AL543_RS01910	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS01910	PF00672	HAMP domain
AL543_RS01910	PF12729	AL543_RS01910
AL543_RS01915	PF11212	AL543_RS01915
AL543_RS01920	PF01566	AL543_RS01920
AL543_RS01925	PF00128	Alpha amylase, catalytic domain
AL543_RS01925	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
AL543_RS01930	PF02264	LamB porin
AL543_RS01935	PF07148	AL543_RS01935
AL543_RS01940	PF08238	Sel1 repeat
AL543_RS01945	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
AL543_RS01950	PF11280	AL543_RS01950
AL543_RS01955	PF05013	N-formylglutamate amidohydrolase
AL543_RS01955	PF08014	AL543_RS01955
AL543_RS01960	PF04219	AL543_RS01960
AL543_RS01965	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS01965	PF03466	LysR substrate binding domain
AL543_RS01970	PF07681	AL543_RS01970
AL543_RS01975	PF02805	Metal binding domain of Ada
AL543_RS01975	PF06029	AlkA N-terminal domain
AL543_RS01975	PF12833	Helix-turn-helix domain
AL543_RS01980	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
AL543_RS01980	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
AL543_RS01990	PF00939	Sodium:sulfate symporter transmembrane region
AL543_RS01995	PF14501	GHKL domain
AL543_RS01995	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
AL543_RS01995	PF17203	AL543_RS01995
AL543_RS02000	PF00072	Response regulator receiver domain
AL543_RS02005	PF03600	Citrate transporter
AL543_RS02010	PF07670	Nucleoside recognition
AL543_RS02015	PF07670	Nucleoside recognition
AL543_RS02020	PF00375	Sodium:dicarboxylate symporter family
AL543_RS02025	PF00892	EamA-like transporter family
AL543_RS02030	PF02698	DUF218 domain
AL543_RS02035	PF02001	AL543_RS02035
AL543_RS02045	PF01638	HxlR-like helix-turn-helix
AL543_RS02055	PF01483	Proprotein convertase P-domain
AL543_RS02055	PF13582	Metallo-peptidase family M12B Reprolysin-like
AL543_RS02065	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
AL543_RS02070	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
AL543_RS02070	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
AL543_RS02075	PF00581	Rhodanese-like domain
AL543_RS02080	PF00563	EAL domain
AL543_RS02085	PF13419	Haloacid dehalogenase-like hydrolase
AL543_RS02090	PF00916	AL543_RS02090
AL543_RS02090	PF01740	STAS domain
AL543_RS02095	PF01797	Transposase IS200 like
AL543_RS02100	PF00849	RNA pseudouridylate synthase
AL543_RS02105	PF05488	PAAR motif
AL543_RS02115	PF05591	AL543_RS02115
AL543_RS02120	PF05943	AL543_RS02120
AL543_RS02125	PF04965	Gene 25-like lysozyme
AL543_RS02130	PF05947	AL543_RS02130
AL543_RS02135	PF06996	AL543_RS02135
AL543_RS02145	PF12790	Type VI secretion lipoprotein
AL543_RS02150	PF05936	AL543_RS02150
AL543_RS02155	PF09850	Uncharacterized protein conserved in bacteria (DUF2077)
AL543_RS02160	PF00004	ATPase family associated with various cellular activities (AAA)
AL543_RS02160	PF02861	Clp amino terminal domain
AL543_RS02160	PF07724	AAA domain (Cdc48 subfamily)
AL543_RS02160	PF10431	C-terminal, D2-small domain, of ClpB protein
AL543_RS02165	PF00158	Sigma-54 interaction domain
AL543_RS02165	PF02954	Bacterial regulatory protein, Fis family
AL543_RS02170	PF11319	AL543_RS02170
AL543_RS02175	PF06812	AL543_RS02175
AL543_RS02175	PF16989	AL543_RS02175
AL543_RS02180	PF06744	AL543_RS02180
AL543_RS02180	PF06761	AL543_RS02180
AL543_RS02180	PF14331	AL543_RS02180
AL543_RS02185	PF06812	AL543_RS02185
AL543_RS02190	PF01471	Putative peptidoglycan binding domain
AL543_RS02190	PF05954	Phage late control gene D protein (GPD)
AL543_RS02200	PF13358	DDE superfamily endonuclease
AL543_RS02200	PF13551	Winged helix-turn helix
AL543_RS02200	PF13592	AL543_RS02200
AL543_RS02210	PF11216	AL543_RS02210
AL543_RS02215	PF05025	RbsD / FucU transport protein family
AL543_RS02220	PF00005	ABC transporter
AL543_RS02225	PF02653	AL543_RS02225
AL543_RS02230	PF13407	Periplasmic binding protein domain
AL543_RS02235	PF00294	pfkB family carbohydrate kinase
AL543_RS02240	PF00356	Bacterial regulatory proteins, lacI family
AL543_RS02240	PF13377	Periplasmic binding protein-like domain
AL543_RS02245	PF04973	AL543_RS02245
AL543_RS02250	PF01048	Phosphorylase superfamily
AL543_RS02255	PF00027	Cyclic nucleotide-binding domain
AL543_RS02260	PF03009	Glycerophosphoryl diester phosphodiesterase family
AL543_RS02265	PF07690	Major Facilitator Superfamily
AL543_RS02270	PF11777	AL543_RS02270
AL543_RS02275	PF02839	Carbohydrate binding domain
AL543_RS02275	PF03067	Chitin binding domain
AL543_RS02280	PF00512	His Kinase A (phospho-acceptor) domain
AL543_RS02280	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS02280	PF13426	PAS domain
AL543_RS02285	PF00072	Response regulator receiver domain
AL543_RS02285	PF00158	Sigma-54 interaction domain
AL543_RS02285	PF02954	Bacterial regulatory protein, Fis family
AL543_RS02295	PF16868	AL543_RS02295
AL543_RS02305	PF06808	AL543_RS02305
AL543_RS02310	PF01266	FAD dependent oxidoreductase
AL543_RS02315	PF10462	Peptidase M66
AL543_RS02315	PF12561	AL543_RS02315
AL543_RS02320	PF01327	Polypeptide deformylase
AL543_RS02325	PF03611	AL543_RS02325
AL543_RS02330	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL543_RS02335	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL543_RS02340	PF00356	Bacterial regulatory proteins, lacI family
AL543_RS02340	PF13377	Periplasmic binding protein-like domain
AL543_RS02345	PF01794	AL543_RS02345
AL543_RS02345	PF08022	AL543_RS02345
AL543_RS02355	PF03222	Tryptophan/tyrosine permease family
AL543_RS02360	PF01212	Beta-eliminating lyase
AL543_RS02375	PF12843	AL543_RS02375
AL543_RS02380	PF03734	L,D-transpeptidase catalytic domain
AL543_RS02385	PF00990	GGDEF domain
AL543_RS02390	PF00313	'Cold-shock' DNA-binding domain
AL543_RS02410	PF04402	Protein of unknown function (DUF541)
AL543_RS02415	PF13584	AL543_RS02415
AL543_RS02420	PF13519	von Willebrand factor type A domain
AL543_RS02420	PF14559	Tetratricopeptide repeat
AL543_RS02425	PF00092	von Willebrand factor type A domain
AL543_RS02430	PF14316	AL543_RS02430
AL543_RS02435	PF01882	AL543_RS02435
AL543_RS02440	PF07726	ATPase family associated with various cellular activities (AAA)
AL543_RS02455	PF01323	DSBA-like thioredoxin domain
AL543_RS02460	PF01773	Na+ dependent nucleoside transporter N-terminus
AL543_RS02460	PF07662	Na+ dependent nucleoside transporter C-terminus
AL543_RS02460	PF07670	Nucleoside recognition
AL543_RS02465	PF01546	Peptidase family M20/M25/M40
AL543_RS02465	PF07687	Peptidase dimerisation domain
AL543_RS02470	PF00924	Mechanosensitive ion channel
AL543_RS02475	PF00158	Sigma-54 interaction domain
AL543_RS02475	PF01590	GAF domain
AL543_RS02480	PF00042	Globin
AL543_RS02480	PF00175	Oxidoreductase NAD-binding domain
AL543_RS02480	PF00970	Oxidoreductase FAD-binding domain
AL543_RS02485	PF00313	'Cold-shock' DNA-binding domain
AL543_RS02490	PF03889	AL543_RS02490
AL543_RS02505	PF00072	Response regulator receiver domain
AL543_RS02510	PF00989	PAS fold
AL543_RS02515	PF01256	Carbohydrate kinase
AL543_RS02515	PF03853	YjeF-related protein N-terminus
AL543_RS02520	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AL543_RS02520	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL543_RS02525	PF03553	AL543_RS02525
AL543_RS02530	PF07885	Ion channel
AL543_RS02535	PF13505	Outer membrane protein beta-barrel domain
AL543_RS02540	PF00478	IMP dehydrogenase / GMP reductase domain
AL543_RS02545	PF00589	Phage integrase family
AL543_RS02550	PF02384	N-6 DNA Methylase
AL543_RS02565	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS02565	PF13589	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS02580	PF07022	Bacteriophage CI repressor helix-turn-helix domain
AL543_RS02580	PF16452	AL543_RS02580
AL543_RS02590	PF06892	AL543_RS02590
AL543_RS02615	PF05840	AL543_RS02615
AL543_RS02625	PF04606	AL543_RS02625
AL543_RS02630	PF13957	AL543_RS02630
AL543_RS02635	PF02498	AL543_RS02635
AL543_RS02645	PF03237	Terminase-like family
AL543_RS02645	PF06056	Putative ATPase subunit of terminase (gpP-like)
AL543_RS02645	PF17289	AL543_RS02645
AL543_RS02650	PF05929	AL543_RS02650
AL543_RS02655	PF05125	AL543_RS02655
AL543_RS02660	PF05944	AL543_RS02660
AL543_RS02670	PF05926	AL543_RS02670
AL543_RS02675	PF06891	AL543_RS02675
AL543_RS02685	PF10758	AL543_RS02685
AL543_RS02690	PF10772	AL543_RS02690
AL543_RS02695	PF01258	Prokaryotic dksA/traR C4-type zinc finger
AL543_RS02700	PF16080	AL543_RS02700
AL543_RS02705	PF00959	Phage lysozyme
AL543_RS02720	PF10963	AL543_RS02720
AL543_RS02725	PF10145	AL543_RS02725
AL543_RS02730	PF10761	AL543_RS02730
AL543_RS02735	PF04865	AL543_RS02735
AL543_RS02745	PF12571	AL543_RS02745
AL543_RS02750	PF10789	AL543_RS02750
AL543_RS02780	PF00270	DEAD/DEAH box helicase
AL543_RS02780	PF00271	Helicase conserved C-terminal domain
AL543_RS02785	PF03605	AL543_RS02785
AL543_RS02790	PF02540	NAD synthase
AL543_RS02795	PF01467	Cytidylyltransferase
AL543_RS02800	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS02800	PF08376	Nitrate and nitrite sensing
AL543_RS02805	PF00072	Response regulator receiver domain
AL543_RS02805	PF11849	AL543_RS02805
AL543_RS02805	PF13487	HD domain
AL543_RS02810	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS02810	PF17149	AL543_RS02810
AL543_RS02820	PF03553	AL543_RS02820
AL543_RS02825	PF07690	Major Facilitator Superfamily
AL543_RS02835	PF00990	GGDEF domain
AL543_RS02840	PF00657	GDSL-like Lipase/Acylhydrolase
AL543_RS02845	PF07968	Leukocidin/Hemolysin toxin family
AL543_RS02845	PF12563	Hemolytic toxin N terminal
AL543_RS02845	PF16458	AL543_RS02845
AL543_RS02850	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS02850	PF12729	AL543_RS02850
AL543_RS02855	PF00801	PKD domain
AL543_RS02855	PF05547	AL543_RS02855
AL543_RS02865	PF13230	Glutamine amidotransferases class-II
AL543_RS02870	PF01497	Periplasmic binding protein
AL543_RS02875	PF01032	FecCD transport family
AL543_RS02880	PF01032	FecCD transport family
AL543_RS02885	PF00005	ABC transporter
AL543_RS02890	PF12833	Helix-turn-helix domain
AL543_RS02895	PF00593	TonB dependent receptor
AL543_RS02895	PF07715	TonB-dependent Receptor Plug Domain
AL543_RS02900	PF09981	Uncharacterized protein conserved in bacteria (DUF2218)
AL543_RS02905	PF00871	Acetokinase family
AL543_RS02920	PF13580	SIS domain
AL543_RS02925	PF00367	phosphotransferase system, EIIB
AL543_RS02925	PF02378	Phosphotransferase system, EIIC
AL543_RS02930	PF01380	SIS domain
AL543_RS02930	PF01418	Helix-turn-helix domain, rpiR family
AL543_RS02935	PF02656	AL543_RS02935
AL543_RS02940	PF02656	AL543_RS02940
AL543_RS02950	PF01261	Xylose isomerase-like TIM barrel
AL543_RS02955	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
AL543_RS02960	PF08282	haloacid dehalogenase-like hydrolase
AL543_RS02965	PF00596	Class II Aldolase and Adducin N-terminal domain
AL543_RS02970	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL543_RS02975	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL543_RS02975	PF03611	AL543_RS02975
AL543_RS02980	PF00455	AL543_RS02980
AL543_RS02980	PF08220	DeoR-like helix-turn-helix domain
AL543_RS02985	PF13483	Beta-lactamase superfamily domain
AL543_RS02995	PF13358	DDE superfamily endonuclease
AL543_RS02995	PF13551	Winged helix-turn helix
AL543_RS02995	PF13592	AL543_RS02995
AL543_RS03000	PF01609	Transposase DDE domain
AL543_RS03010	PF13358	DDE superfamily endonuclease
AL543_RS03010	PF13384	Homeodomain-like domain
AL543_RS03010	PF13592	AL543_RS03010
AL543_RS03015	PF05025	RbsD / FucU transport protein family
AL543_RS03020	PF00596	Class II Aldolase and Adducin N-terminal domain
AL543_RS03035	PF02653	AL543_RS03035
AL543_RS03040	PF13407	Periplasmic binding protein domain
AL543_RS03050	PF00873	AcrB/AcrD/AcrF family
AL543_RS03055	PF11604	Copper binding periplasmic protein CusF
AL543_RS03055	PF16576	AL543_RS03055
AL543_RS03060	PF02321	Outer membrane efflux protein
AL543_RS03080	PF03067	Chitin binding domain
AL543_RS03085	PF04244	Deoxyribodipyrimidine photo-lyase-related protein
AL543_RS03090	PF01575	MaoC like domain
AL543_RS03095	PF12849	PBP superfamily domain
AL543_RS03100	PF11225	AL543_RS03100
AL543_RS03105	PF00575	S1 RNA binding domain
AL543_RS03105	PF00773	RNB domain
AL543_RS03105	PF08206	Ribonuclease B OB domain
AL543_RS03110	PF00270	DEAD/DEAH box helicase
AL543_RS03110	PF00271	Helicase conserved C-terminal domain
AL543_RS03110	PF03880	DbpA RNA binding domain
AL543_RS03115	PF00089	Trypsin
AL543_RS03120	PF00884	Sulfatase
AL543_RS03125	PF00294	pfkB family carbohydrate kinase
AL543_RS03130	PF05981	AL543_RS03130
AL543_RS03140	PF13419	Haloacid dehalogenase-like hydrolase
AL543_RS03150	PF03091	CutA1 divalent ion tolerance protein
AL543_RS03155	PF09997	AL543_RS03155
AL543_RS03160	PF00226	DnaJ domain
AL543_RS03160	PF12339	AL543_RS03160
AL543_RS03165	PF09818	Predicted ATPase of the ABC class
AL543_RS03170	PF00563	EAL domain
AL543_RS03170	PF00990	GGDEF domain
AL543_RS03170	PF01590	GAF domain
AL543_RS03175	PF07055	Enoyl reductase FAD binding domain
AL543_RS03175	PF12241	Trans-2-enoyl-CoA reductase catalytic region
AL543_RS03175	PF12242	NAD(P)H binding domain of trans-2-enoyl-CoA reductase
AL543_RS03180	PF13472	GDSL-like Lipase/Acylhydrolase family
AL543_RS03185	PF00005	ABC transporter
AL543_RS03190	PF02687	AL543_RS03190
AL543_RS03195	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
AL543_RS03195	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
AL543_RS03200	PF01266	FAD dependent oxidoreductase
AL543_RS03205	PF02626	Allophanate hydrolase subunit 2
AL543_RS03210	PF02682	Allophanate hydrolase subunit 1
AL543_RS03215	PF03746	LamB/YcsF family
AL543_RS03220	PF16363	AL543_RS03220
AL543_RS03230	PF03222	Tryptophan/tyrosine permease family
AL543_RS03240	PF04336	AL543_RS03240
AL543_RS03245	PF00270	DEAD/DEAH box helicase
AL543_RS03245	PF00271	Helicase conserved C-terminal domain
AL543_RS03250	PF00440	Bacterial regulatory proteins, tetR family
AL543_RS03255	PF00034	Cytochrome c
AL543_RS03260	PF01212	Beta-eliminating lyase
AL543_RS03265	PF00293	NUDIX domain
AL543_RS03270	PF07728	AAA domain (dynein-related subfamily)
AL543_RS03270	PF12592	Protein of unknown function (DUF3763)
AL543_RS03275	PF05762	VWA domain containing CoxE-like protein
AL543_RS03285	PF00005	ABC transporter
AL543_RS03290	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL543_RS03295	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS03300	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS03305	PF02634	FdhD/NarQ family
AL543_RS03310	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS03310	PF03466	LysR substrate binding domain
AL543_RS03315	PF13358	DDE superfamily endonuclease
AL543_RS03315	PF13551	Winged helix-turn helix
AL543_RS03315	PF13592	AL543_RS03315
AL543_RS03325	PF00384	Molybdopterin oxidoreductase
AL543_RS03325	PF01568	Molydopterin dinucleotide binding domain
AL543_RS03340	PF01764	Lipase (class 3)
AL543_RS03345	PF11756	AL543_RS03345
AL543_RS03350	PF07690	Major Facilitator Superfamily
AL543_RS03355	PF00085	Thioredoxin
AL543_RS03360	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
AL543_RS03360	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
AL543_RS03365	PF00990	GGDEF domain
AL543_RS03370	PF13641	Glycosyltransferase like family 2
AL543_RS03375	PF13437	HlyD family secretion protein
AL543_RS03380	PF02754	AL543_RS03380
AL543_RS03380	PF13183	4Fe-4S dicluster domain
AL543_RS03385	PF00890	FAD binding domain
AL543_RS03390	PF01266	FAD dependent oxidoreductase
AL543_RS03390	PF04324	BFD-like [2Fe-2S] binding domain
AL543_RS03400	PF00230	Major intrinsic protein
AL543_RS03405	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
AL543_RS03405	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
AL543_RS03410	PF10688	AL543_RS03410
AL543_RS03415	PF04363	AL543_RS03415
AL543_RS03425	PF04337	Protein of unknown function, DUF480
AL543_RS03430	PF13358	DDE superfamily endonuclease
AL543_RS03430	PF13384	Homeodomain-like domain
AL543_RS03430	PF13592	AL543_RS03430
AL543_RS03435	PF01541	GIY-YIG catalytic domain
AL543_RS03440	PF13729	AL543_RS03440
AL543_RS03445	PF13407	Periplasmic binding protein domain
AL543_RS03450	PF00072	Response regulator receiver domain
AL543_RS03450	PF00512	His Kinase A (phospho-acceptor) domain
AL543_RS03450	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS03450	PF09308	LuxQ, periplasmic
AL543_RS03455	PF07238	PilZ domain
AL543_RS03455	PF12945	Flagellar protein YcgR
AL543_RS03465	PF04076	Bacterial OB fold (BOF) protein
AL543_RS03470	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
AL543_RS03470	PF07685	CobB/CobQ-like glutamine amidotransferase domain
AL543_RS03475	PF13531	Bacterial extracellular solute-binding protein
AL543_RS03480	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS03485	PF00005	ABC transporter
AL543_RS03485	PF03459	TOBE domain
AL543_RS03490	PF00368	Hydroxymethylglutaryl-coenzyme A reductase
AL543_RS03505	PF12805	AL543_RS03505
AL543_RS03505	PF13515	AL543_RS03505
AL543_RS03510	PF00580	UvrD/REP helicase N-terminal domain
AL543_RS03510	PF12462	AL543_RS03510
AL543_RS03510	PF13361	UvrD-like helicase C-terminal domain
AL543_RS03515	PF01447	Thermolysin metallopeptidase, catalytic domain
AL543_RS03515	PF02868	Thermolysin metallopeptidase, alpha-helical domain
AL543_RS03520	PF01292	Prokaryotic cytochrome b561
AL543_RS03525	PF13670	AL543_RS03525
AL543_RS03530	PF01609	Transposase DDE domain
AL543_RS03535	PF01219	Prokaryotic diacylglycerol kinase
AL543_RS03540	PF13358	DDE superfamily endonuclease
AL543_RS03540	PF13384	Homeodomain-like domain
AL543_RS03540	PF13592	AL543_RS03540
AL543_RS03545	PF01569	PAP2 superfamily
AL543_RS03550	PF00857	Isochorismatase family
AL543_RS03555	PF02142	MGS-like domain
AL543_RS03560	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
AL543_RS03565	PF00072	Response regulator receiver domain
AL543_RS03565	PF00512	His Kinase A (phospho-acceptor) domain
AL543_RS03565	PF01627	Hpt domain
AL543_RS03565	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS03570	PF00224	Pyruvate kinase, barrel domain
AL543_RS03570	PF02887	Pyruvate kinase, alpha/beta domain
AL543_RS03575	PF07690	Major Facilitator Superfamily
AL543_RS03585	PF13343	Bacterial extracellular solute-binding protein
AL543_RS03590	PF00512	His Kinase A (phospho-acceptor) domain
AL543_RS03590	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS03595	PF00072	Response regulator receiver domain
AL543_RS03595	PF02954	Bacterial regulatory protein, Fis family
AL543_RS03595	PF14532	Sigma-54 interaction domain
AL543_RS03600	PF07947	AL543_RS03600
AL543_RS03610	PF00704	Glycosyl hydrolases family 18
AL543_RS03610	PF06483	AL543_RS03610
AL543_RS03615	PF00483	Nucleotidyl transferase
AL543_RS03620	PF00990	GGDEF domain
AL543_RS03620	PF13426	PAS domain
AL543_RS03635	PF02355	Protein export membrane protein
AL543_RS03635	PF07549	SecD/SecF GG Motif
AL543_RS03635	PF13721	SecD export protein N-terminal TM region
AL543_RS03640	PF02355	Protein export membrane protein
AL543_RS03640	PF07549	SecD/SecF GG Motif
AL543_RS03645	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL543_RS03650	PF02378	Phosphotransferase system, EIIC
AL543_RS03655	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
AL543_RS03665	PF00728	Glycosyl hydrolase family 20, catalytic domain
AL543_RS03665	PF02838	Glycosyl hydrolase family 20, domain 2
AL543_RS03665	PF03173	Putative carbohydrate binding domain
AL543_RS03665	PF03174	Chitobiase/beta-hexosaminidase C-terminal domain
AL543_RS03670	PF13561	Enoyl-(Acyl carrier protein) reductase
AL543_RS03675	PF00108	Thiolase, N-terminal domain
AL543_RS03675	PF02803	Thiolase, C-terminal domain
AL543_RS03680	PF09361	AL543_RS03680
AL543_RS03685	PF07167	AL543_RS03685
AL543_RS03690	PF05547	AL543_RS03690
AL543_RS03695	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS03700	PF01478	Type IV leader peptidase family
AL543_RS03705	PF04964	AL543_RS03705
AL543_RS03715	PF00263	AL543_RS03715
AL543_RS03715	PF13629	AL543_RS03715
AL543_RS03725	PF13614	AAA domain
AL543_RS03730	PF00437	Type II/IV secretion system protein
AL543_RS03735	PF00482	Type II secretion system (T2SS), protein F
AL543_RS03740	PF00482	Type II secretion system (T2SS), protein F
AL543_RS03745	PF13432	Tetratricopeptide repeat
AL543_RS03750	PF07811	AL543_RS03750
AL543_RS03755	PF16964	AL543_RS03755
AL543_RS03765	PF00691	OmpA family
AL543_RS03770	PF00005	ABC transporter
AL543_RS03770	PF08402	TOBE domain
AL543_RS03775	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS03780	PF13343	Bacterial extracellular solute-binding protein
AL543_RS03785	PF07690	Major Facilitator Superfamily
AL543_RS03790	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS03790	PF05231	AL543_RS03790
AL543_RS03790	PF07730	Histidine kinase
AL543_RS03795	PF00072	Response regulator receiver domain
AL543_RS03795	PF00196	Bacterial regulatory proteins, luxR family
AL543_RS03800	PF01966	HD domain
AL543_RS03805	PF09574	AL543_RS03805
AL543_RS03810	PF03264	NapC/NirT cytochrome c family, N-terminal region
AL543_RS03815	PF03892	Nitrate reductase cytochrome c-type subunit (NapB)
AL543_RS03820	PF00384	Molybdopterin oxidoreductase
AL543_RS03820	PF01568	Molydopterin dinucleotide binding domain
AL543_RS03820	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
AL543_RS03825	PF03927	NapD protein
AL543_RS03830	PF12838	4Fe-4S dicluster domain
AL543_RS03835	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS03835	PF07730	Histidine kinase
AL543_RS03835	PF13675	Type IV pili methyl-accepting chemotaxis transducer N-term
AL543_RS03840	PF00072	Response regulator receiver domain
AL543_RS03840	PF00196	Bacterial regulatory proteins, luxR family
AL543_RS03845	PF03313	AL543_RS03845
AL543_RS03845	PF03315	Serine dehydratase beta chain
AL543_RS03850	PF03606	AL543_RS03850
AL543_RS03855	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS03860	PF13419	Haloacid dehalogenase-like hydrolase
AL543_RS03865	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AL543_RS03865	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
AL543_RS03870	PF00691	OmpA family
AL543_RS03875	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS03875	PF08447	PAS fold
AL543_RS03880	PF01266	FAD dependent oxidoreductase
AL543_RS03880	PF16901	AL543_RS03880
AL543_RS03885	PF11269	Protein of unknown function (DUF3069)
AL543_RS03890	PF09335	AL543_RS03890
AL543_RS03905	PF05742	AL543_RS03905
AL543_RS03910	PF04945	YHS domain
AL543_RS03920	PF01553	Acyltransferase
AL543_RS03920	PF13444	Acetyltransferase (GNAT) domain
AL543_RS03930	PF11168	AL543_RS03930
AL543_RS03930	PF13515	AL543_RS03930
AL543_RS03935	PF13437	HlyD family secretion protein
AL543_RS03935	PF13533	Biotin-lipoyl like
AL543_RS03940	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS03940	PF03466	LysR substrate binding domain
AL543_RS03945	PF00581	Rhodanese-like domain
AL543_RS03945	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AL543_RS03945	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL543_RS03950	PF11127	Protein of unknown function (DUF2892)
AL543_RS03955	PF12840	Helix-turn-helix domain
AL543_RS03960	PF04143	AL543_RS03960
AL543_RS03970	PF16576	AL543_RS03970
AL543_RS03975	PF00873	AcrB/AcrD/AcrF family
AL543_RS03980	PF01797	Transposase IS200 like
AL543_RS03985	PF00881	Nitroreductase family
AL543_RS03990	PF03992	Antibiotic biosynthesis monooxygenase
AL543_RS03995	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS03995	PF03466	LysR substrate binding domain
AL543_RS04000	PF12847	Methyltransferase domain
AL543_RS04005	PF06942	AL543_RS04005
AL543_RS04010	PF00293	NUDIX domain
AL543_RS04015	PF00857	Isochorismatase family
AL543_RS04020	PF13302	Acetyltransferase (GNAT) domain
AL543_RS04025	PF14234	AL543_RS04025
AL543_RS04030	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AL543_RS04030	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL543_RS04040	PF05145	AL543_RS04040
AL543_RS04045	PF13304	AAA domain
AL543_RS04050	PF14491	AL543_RS04050
AL543_RS04055	PF00588	SpoU rRNA Methylase family
AL543_RS04060	PF00456	Transketolase, thiamine diphosphate binding domain
AL543_RS04060	PF02779	Transketolase, pyrimidine binding domain
AL543_RS04060	PF02780	Transketolase, C-terminal domain
AL543_RS04065	PF00923	Transaldolase
AL543_RS04070	PF04198	Putative sugar-binding domain
AL543_RS04075	PF00704	Glycosyl hydrolases family 18
AL543_RS04080	PF00581	Rhodanese-like domain
AL543_RS04090	PF00899	ThiF family
AL543_RS04095	PF00994	Probable molybdopterin binding domain
AL543_RS04095	PF03453	MoeA N-terminal region (domain I and II)
AL543_RS04095	PF03454	MoeA C-terminal region (domain IV)
AL543_RS04100	PF01227	GTP cyclohydrolase I
AL543_RS04105	PF01625	Peptide methionine sulfoxide reductase
AL543_RS04105	PF01641	SelR domain
AL543_RS04110	PF01268	Formate--tetrahydrofolate ligase
AL543_RS04115	PF01741	Large-conductance mechanosensitive channel, MscL
AL543_RS04120	PF00465	Iron-containing alcohol dehydrogenase
AL543_RS04135	PF13419	Haloacid dehalogenase-like hydrolase
AL543_RS04140	PF01272	Transcription elongation factor, GreA/GreB, C-term
AL543_RS04140	PF14760	Rnk N-terminus
AL543_RS04145	PF13419	Haloacid dehalogenase-like hydrolase
AL543_RS04150	PF00202	Aminotransferase class-III
AL543_RS04155	PF00266	Aminotransferase class-V
AL543_RS04160	PF13343	Bacterial extracellular solute-binding protein
AL543_RS04165	PF00005	ABC transporter
AL543_RS04170	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS04175	PF00392	Bacterial regulatory proteins, gntR family
AL543_RS04175	PF07702	UTRA domain
AL543_RS04180	PF00892	EamA-like transporter family
AL543_RS04185	PF07690	Major Facilitator Superfamily
AL543_RS04190	PF02698	DUF218 domain
AL543_RS04195	PF03891	AL543_RS04195
AL543_RS04205	PF00293	NUDIX domain
AL543_RS04210	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL543_RS04215	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS04220	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS04220	PF12911	AL543_RS04220
AL543_RS04225	PF00005	ABC transporter
AL543_RS04225	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL543_RS04230	PF05193	Peptidase M16 inactive domain
AL543_RS04235	PF03479	Domain of unknown function (DUF296)
AL543_RS04240	PF00440	Bacterial regulatory proteins, tetR family
AL543_RS04245	PF13410	Glutathione S-transferase, C-terminal domain
AL543_RS04245	PF13417	Glutathione S-transferase, N-terminal domain
AL543_RS04250	PF00043	Glutathione S-transferase, C-terminal domain
AL543_RS04250	PF02798	Glutathione S-transferase, N-terminal domain
AL543_RS04255	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL543_RS04260	PF13275	S4 domain
AL543_RS04265	PF01435	Peptidase family M48
AL543_RS04270	PF03061	Thioesterase superfamily
AL543_RS04275	PF11869	AL543_RS04275
AL543_RS04280	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL543_RS04280	PF12793	AL543_RS04280
AL543_RS04290	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS04290	PF03466	LysR substrate binding domain
AL543_RS04295	PF00583	Acetyltransferase (GNAT) family
AL543_RS04295	PF13380	CoA binding domain
AL543_RS04295	PF13549	ATP-grasp domain
AL543_RS04295	PF13607	Succinyl-CoA ligase like flavodoxin domain
AL543_RS04300	PF05036	Sporulation related domain
AL543_RS04305	PF01820	D-ala D-ala ligase N-terminus
AL543_RS04305	PF07478	D-ala D-ala ligase C-terminus
AL543_RS04310	PF11782	AL543_RS04310
AL543_RS04315	PF01253	Translation initiation factor SUI1
AL543_RS04320	PF01648	4'-phosphopantetheinyl transferase superfamily
AL543_RS04325	PF00005	ABC transporter
AL543_RS04325	PF00664	ABC transporter transmembrane region
AL543_RS04330	PF00005	ABC transporter
AL543_RS04330	PF00664	ABC transporter transmembrane region
AL543_RS04335	PF00501	AMP-binding enzyme
AL543_RS04335	PF13193	AMP-binding enzyme C-terminal domain
AL543_RS04340	PF00425	chorismate binding enzyme
AL543_RS04345	PF00975	Thioesterase domain
AL543_RS04350	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
AL543_RS04355	PF00109	Beta-ketoacyl synthase, N-terminal domain
AL543_RS04355	PF00501	AMP-binding enzyme
AL543_RS04355	PF00550	Phosphopantetheine attachment site
AL543_RS04355	PF00668	Condensation domain
AL543_RS04355	PF00698	Acyl transferase domain
AL543_RS04355	PF00975	Thioesterase domain
AL543_RS04355	PF02801	Beta-ketoacyl synthase, C-terminal domain
AL543_RS04355	PF08242	Methyltransferase domain
AL543_RS04355	PF08659	KR domain
AL543_RS04355	PF13193	AMP-binding enzyme C-terminal domain
AL543_RS04355	PF16197	AL543_RS04355
AL543_RS04360	PF00501	AMP-binding enzyme
AL543_RS04360	PF00550	Phosphopantetheine attachment site
AL543_RS04360	PF00668	Condensation domain
AL543_RS04360	PF13847	Methyltransferase domain
AL543_RS04370	PF00593	TonB dependent receptor
AL543_RS04370	PF07715	TonB-dependent Receptor Plug Domain
AL543_RS04375	PF12833	Helix-turn-helix domain
AL543_RS04380	PF12833	Helix-turn-helix domain
AL543_RS04395	PF02303	Helix-destabilising protein
AL543_RS04400	PF05144	AL543_RS04400
AL543_RS04400	PF05155	AL543_RS04400
AL543_RS04405	PF01381	Helix-turn-helix
AL543_RS04430	PF02303	Helix-destabilising protein
AL543_RS04435	PF05144	AL543_RS04435
AL543_RS04435	PF05155	AL543_RS04435
AL543_RS04440	PF01381	Helix-turn-helix
AL543_RS04455	PF03701	AL543_RS04455
AL543_RS04460	PF13729	AL543_RS04460
AL543_RS04465	PF11060	AL543_RS04465
AL543_RS04470	PF00072	Response regulator receiver domain
AL543_RS04470	PF00486	Transcriptional regulatory protein, C terminal
AL543_RS04475	PF00512	His Kinase A (phospho-acceptor) domain
AL543_RS04475	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS04475	PF11884	Domain of unknown function (DUF3404)
AL543_RS04480	PF02233	NAD(P) transhydrogenase beta subunit
AL543_RS04485	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
AL543_RS04485	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
AL543_RS04485	PF12769	Domain of unknown function (DUF3814)
AL543_RS04490	PF10115	AL543_RS04490
AL543_RS04495	PF10719	AL543_RS04495
AL543_RS04500	PF00990	GGDEF domain
AL543_RS04505	PF11557	AL543_RS04505
AL543_RS04510	PF01019	Gamma-glutamyltranspeptidase
AL543_RS04520	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL543_RS04520	PF00990	GGDEF domain
AL543_RS04525	PF11810	AL543_RS04525
AL543_RS04530	PF07690	Major Facilitator Superfamily
AL543_RS04535	PF06934	AL543_RS04535
AL543_RS04550	PF02163	Peptidase family M50
AL543_RS04555	PF03831	PhnA protein
AL543_RS04555	PF08274	PhnA Zinc-Ribbon
AL543_RS04565	PF03741	AL543_RS04565
AL543_RS04570	PF00149	Calcineurin-like phosphoesterase
AL543_RS04570	PF02872	5'-nucleotidase, C-terminal domain
AL543_RS04575	PF11398	Protein of unknown function (DUF2813)
AL543_RS04580	PF06496	AL543_RS04580
AL543_RS04585	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS04585	PF03466	LysR substrate binding domain
AL543_RS04590	PF00571	CBS domain
AL543_RS04590	PF01226	Formate/nitrite transporter
AL543_RS04595	PF04264	YceI-like domain
AL543_RS04600	PF01292	Prokaryotic cytochrome b561
AL543_RS04610	PF00563	EAL domain
AL543_RS04615	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS04615	PF00672	HAMP domain
AL543_RS04620	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS04620	PF00672	HAMP domain
AL543_RS04630	PF09335	AL543_RS04630
AL543_RS04635	PF07646	Kelch motif
AL543_RS04640	PF01344	Kelch motif
AL543_RS04645	PF01380	SIS domain
AL543_RS04645	PF01418	Helix-turn-helix domain, rpiR family
AL543_RS04650	PF00701	Dihydrodipicolinate synthetase family
AL543_RS04655	PF06808	AL543_RS04655
AL543_RS04660	PF04290	AL543_RS04660
AL543_RS04665	PF03480	Bacterial extracellular solute-binding protein, family 7
AL543_RS04675	PF04131	Putative N-acetylmannosamine-6-phosphate epimerase
AL543_RS04680	PF00480	ROK family
AL543_RS04685	PF01979	Amidohydrolase family
AL543_RS04690	PF13358	DDE superfamily endonuclease
AL543_RS04690	PF13551	Winged helix-turn helix
AL543_RS04690	PF13592	AL543_RS04690
AL543_RS04700	PF13358	DDE superfamily endonuclease
AL543_RS04700	PF13384	Homeodomain-like domain
AL543_RS04700	PF13592	AL543_RS04700
AL543_RS04710	PF01926	50S ribosome-binding GTPase
AL543_RS04715	PF02492	CobW/HypB/UreG, nucleotide-binding domain
AL543_RS04720	PF00654	Voltage gated chloride channel
AL543_RS04725	PF03595	Voltage-dependent anion channel
AL543_RS04730	PF01609	Transposase DDE domain
AL543_RS04740	PF00155	Aminotransferase class I and II
AL543_RS04745	PF00072	Response regulator receiver domain
AL543_RS04745	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS04750	PF13476	AAA domain
AL543_RS04750	PF13558	Putative exonuclease SbcCD, C subunit
AL543_RS04755	PF00149	Calcineurin-like phosphoesterase
AL543_RS04755	PF12320	Type 5 capsule protein repressor C-terminal domain
AL543_RS04760	PF00356	Bacterial regulatory proteins, lacI family
AL543_RS04760	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
AL543_RS04765	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL543_RS04765	PF00381	PTS HPr component phosphorylation site
AL543_RS04770	PF00294	pfkB family carbohydrate kinase
AL543_RS04775	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL543_RS04775	PF02378	Phosphotransferase system, EIIC
AL543_RS04780	PF00563	EAL domain
AL543_RS04785	PF05618	Putative ATP-dependant zinc protease
AL543_RS04790	PF00155	Aminotransferase class I and II
AL543_RS04795	PF13353	4Fe-4S single cluster domain
AL543_RS04800	PF03477	ATP cone domain
AL543_RS04800	PF13597	Anaerobic ribonucleoside-triphosphate reductase
AL543_RS04805	PF02627	Carboxymuconolactone decarboxylase family
AL543_RS04810	PF12833	Helix-turn-helix domain
AL543_RS04810	PF12852	Cupin
AL543_RS04815	PF01663	Type I phosphodiesterase / nucleotide pyrophosphatase
AL543_RS04820	PF13358	DDE superfamily endonuclease
AL543_RS04820	PF13384	Homeodomain-like domain
AL543_RS04820	PF13592	AL543_RS04820
AL543_RS04835	PF02661	Fic/DOC family
AL543_RS04840	PF04875	AL543_RS04840
AL543_RS04855	PF04365	Protein of unknown function (DUF497)
AL543_RS04880	PF08843	Nucleotidyl transferase of unknown function (DUF1814)
AL543_RS04885	PF14106	AL543_RS04885
AL543_RS04890	PF11665	AL543_RS04890
AL543_RS04900	PF11665	AL543_RS04900
AL543_RS04905	PF00583	Acetyltransferase (GNAT) family
AL543_RS04910	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL543_RS04930	PF01699	Sodium/calcium exchanger protein
AL543_RS04935	PF04229	GrpB protein
AL543_RS04945	PF00076	RNA recognition motif
AL543_RS04955	PF04875	AL543_RS04955
AL543_RS04960	PF13302	Acetyltransferase (GNAT) domain
AL543_RS04965	PF11665	AL543_RS04965
AL543_RS04980	PF11665	AL543_RS04980
AL543_RS04990	PF12493	AL543_RS04990
AL543_RS05000	PF13358	DDE superfamily endonuclease
AL543_RS05000	PF13551	Winged helix-turn helix
AL543_RS05000	PF13592	AL543_RS05000
AL543_RS05010	PF12681	Glyoxalase-like domain
AL543_RS05015	PF04221	RelB antitoxin
AL543_RS05020	PF05016	Plasmid stabilisation system protein
AL543_RS05045	PF01609	Transposase DDE domain
AL543_RS05050	PF00574	Clp protease
AL543_RS05060	PF01609	Transposase DDE domain
AL543_RS05075	PF02567	Phenazine biosynthesis-like protein
AL543_RS05095	PF11665	AL543_RS05095
AL543_RS05100	PF11665	AL543_RS05100
AL543_RS05105	PF04237	YjbR
AL543_RS05130	PF09016	Pas factor saposin fold
AL543_RS05150	PF00076	RNA recognition motif
AL543_RS05160	PF03358	NADPH-dependent FMN reductase
AL543_RS05165	PF13302	Acetyltransferase (GNAT) domain
AL543_RS05170	PF01609	Transposase DDE domain
AL543_RS05195	PF07653	Variant SH3 domain
AL543_RS05200	PF14375	AL543_RS05200
AL543_RS05210	PF01609	Transposase DDE domain
AL543_RS05215	PF12493	AL543_RS05215
AL543_RS05225	PF12493	AL543_RS05225
AL543_RS05230	PF11665	AL543_RS05230
AL543_RS05245	PF01609	Transposase DDE domain
AL543_RS05280	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
AL543_RS05285	PF05016	Plasmid stabilisation system protein
AL543_RS05290	PF12680	SnoaL-like domain
AL543_RS05300	PF07929	Plasmid pRiA4b ORF-3-like protein
AL543_RS05305	PF12493	AL543_RS05305
AL543_RS05310	PF12493	AL543_RS05310
AL543_RS05320	PF11948	AL543_RS05320
AL543_RS05345	PF11665	AL543_RS05345
AL543_RS05375	PF13673	Acetyltransferase (GNAT) domain
AL543_RS05380	PF13673	Acetyltransferase (GNAT) domain
AL543_RS05395	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
AL543_RS05400	PF05016	Plasmid stabilisation system protein
AL543_RS05405	PF11665	AL543_RS05405
AL543_RS05415	PF12493	AL543_RS05415
AL543_RS05430	PF11665	AL543_RS05430
AL543_RS05435	PF01906	Putative heavy-metal-binding
AL543_RS05450	PF11665	AL543_RS05450
AL543_RS05465	PF04299	Putative FMN-binding domain
AL543_RS05475	PF11665	AL543_RS05475
AL543_RS05480	PF01906	Putative heavy-metal-binding
AL543_RS05495	PF01391	Collagen triple helix repeat (20 copies)
AL543_RS05505	PF12493	AL543_RS05505
AL543_RS05510	PF11665	AL543_RS05510
AL543_RS05515	PF13358	DDE superfamily endonuclease
AL543_RS05515	PF13551	Winged helix-turn helix
AL543_RS05515	PF13592	AL543_RS05515
AL543_RS05520	PF04875	AL543_RS05520
AL543_RS05535	PF12493	AL543_RS05535
AL543_RS05540	PF12493	AL543_RS05540
AL543_RS05560	PF11665	AL543_RS05560
AL543_RS05570	PF04875	AL543_RS05570
AL543_RS05590	PF04875	AL543_RS05590
AL543_RS05610	PF04875	AL543_RS05610
AL543_RS05615	PF11665	AL543_RS05615
AL543_RS05620	PF13673	Acetyltransferase (GNAT) domain
AL543_RS05630	PF04875	AL543_RS05630
AL543_RS05640	PF09905	Uncharacterized conserved protein (DUF2132)
AL543_RS05645	PF04875	AL543_RS05645
AL543_RS05650	PF11665	AL543_RS05650
AL543_RS05655	PF01906	Putative heavy-metal-binding
AL543_RS05665	PF11948	AL543_RS05665
AL543_RS05670	PF01555	DNA methylase
AL543_RS05680	PF04229	GrpB protein
AL543_RS05700	PF12493	AL543_RS05700
AL543_RS05705	PF13669	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL543_RS05710	PF11665	AL543_RS05710
AL543_RS05730	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL543_RS05750	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL543_RS05755	PF12493	AL543_RS05755
AL543_RS05760	PF12464	Maltose acetyltransferase
AL543_RS05760	PF14602	Hexapeptide repeat of succinyl-transferase
AL543_RS05765	PF10899	AL543_RS05765
AL543_RS05770	PF11665	AL543_RS05770
AL543_RS05775	PF01381	Helix-turn-helix
AL543_RS05780	PF05015	Plasmid maintenance system killer protein
AL543_RS05790	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL543_RS05805	PF12493	AL543_RS05805
AL543_RS05810	PF03693	Uncharacterised protein family (UPF0156)
AL543_RS05815	PF05016	Plasmid stabilisation system protein
AL543_RS05820	PF11665	AL543_RS05820
AL543_RS05850	PF12493	AL543_RS05850
AL543_RS05855	PF12493	AL543_RS05855
AL543_RS05870	PF12493	AL543_RS05870
AL543_RS05885	PF02498	AL543_RS05885
AL543_RS05895	PF12493	AL543_RS05895
AL543_RS05905	PF01202	Shikimate kinase
AL543_RS05915	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL543_RS05920	PF00583	Acetyltransferase (GNAT) family
AL543_RS05925	PF02048	Heat-stable enterotoxin ST
AL543_RS05935	PF00583	Acetyltransferase (GNAT) family
AL543_RS05940	PF12493	AL543_RS05940
AL543_RS05945	PF11225	AL543_RS05945
AL543_RS05955	PF13302	Acetyltransferase (GNAT) domain
AL543_RS05960	PF11665	AL543_RS05960
AL543_RS05975	PF11665	AL543_RS05975
AL543_RS05980	PF04266	ASCH domain
AL543_RS05985	PF07362	Post-segregation antitoxin CcdA
AL543_RS05990	PF01845	CcdB protein
AL543_RS06000	PF11185	AL543_RS06000
AL543_RS06020	PF12493	AL543_RS06020
AL543_RS06030	PF11665	AL543_RS06030
AL543_RS06035	PF13175	AAA ATPase domain
AL543_RS06040	PF00665	Integrase core domain
AL543_RS06040	PF13936	Helix-turn-helix domain
AL543_RS06060	PF03693	Uncharacterised protein family (UPF0156)
AL543_RS06065	PF05016	Plasmid stabilisation system protein
AL543_RS06070	PF05016	Plasmid stabilisation system protein
AL543_RS06075	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
AL543_RS06080	PF11665	AL543_RS06080
AL543_RS06085	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL543_RS06090	PF12493	AL543_RS06090
AL543_RS06095	PF11665	AL543_RS06095
AL543_RS06100	PF11225	AL543_RS06100
AL543_RS06105	PF11665	AL543_RS06105
AL543_RS06110	PF11665	AL543_RS06110
AL543_RS06125	PF06769	Plasmid encoded toxin Txe
AL543_RS06130	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
AL543_RS06140	PF05016	Plasmid stabilisation system protein
AL543_RS06145	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
AL543_RS06150	PF11665	AL543_RS06150
AL543_RS06155	PF07362	Post-segregation antitoxin CcdA
AL543_RS06160	PF01845	CcdB protein
AL543_RS06170	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL543_RS06185	PF12493	AL543_RS06185
AL543_RS06190	PF11665	AL543_RS06190
AL543_RS06195	PF04266	ASCH domain
AL543_RS06205	PF04875	AL543_RS06205
AL543_RS06235	PF02810	SEC-C motif
AL543_RS06240	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
AL543_RS06245	PF11665	AL543_RS06245
AL543_RS06250	PF11665	AL543_RS06250
AL543_RS06260	PF12681	Glyoxalase-like domain
AL543_RS06265	PF04229	GrpB protein
AL543_RS06270	PF04875	AL543_RS06270
AL543_RS06275	PF13302	Acetyltransferase (GNAT) domain
AL543_RS06280	PF11665	AL543_RS06280
AL543_RS06290	PF03235	AL543_RS06290
AL543_RS06290	PF07510	AL543_RS06290
AL543_RS06315	PF13302	Acetyltransferase (GNAT) domain
AL543_RS06320	PF11665	AL543_RS06320
AL543_RS06335	PF02810	SEC-C motif
AL543_RS06340	PF00589	Phage integrase family
AL543_RS06340	PF13495	Phage integrase, N-terminal SAM-like domain
AL543_RS06345	PF01797	Transposase IS200 like
AL543_RS06350	PF00453	Ribosomal protein L20
AL543_RS06355	PF01632	Ribosomal protein L35
AL543_RS06360	PF00707	Translation initiation factor IF-3, C-terminal domain
AL543_RS06360	PF05198	Translation initiation factor IF-3, N-terminal domain
AL543_RS06365	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
AL543_RS06365	PF02824	TGS domain
AL543_RS06365	PF03129	Anticodon binding domain
AL543_RS06365	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
AL543_RS06370	PF01571	Aminomethyltransferase folate-binding domain
AL543_RS06370	PF08669	Glycine cleavage T-protein C-terminal barrel domain
AL543_RS06375	PF01381	Helix-turn-helix
AL543_RS06375	PF07883	Cupin domain
AL543_RS06380	PF00464	Serine hydroxymethyltransferase
AL543_RS06385	PF01597	Glycine cleavage H-protein
AL543_RS06395	PF02347	Glycine cleavage system P-protein
AL543_RS06400	PF13472	GDSL-like Lipase/Acylhydrolase family
AL543_RS06405	PF00194	Eukaryotic-type carbonic anhydrase
AL543_RS06420	PF00768	D-alanyl-D-alanine carboxypeptidase
AL543_RS06420	PF07943	Penicillin-binding protein 5, C-terminal domain
AL543_RS06425	PF01614	Bacterial transcriptional regulator
AL543_RS06425	PF09339	IclR helix-turn-helix domain
AL543_RS06430	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS06435	PF00005	ABC transporter
AL543_RS06435	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL543_RS06440	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS06440	PF12911	AL543_RS06440
AL543_RS06445	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS06450	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL543_RS06455	PF10022	AL543_RS06455
AL543_RS06460	PF04055	Radical SAM superfamily
AL543_RS06460	PF13186	Iron-sulfur cluster-binding domain
AL543_RS06465	PF00884	Sulfatase
AL543_RS06470	PF00884	Sulfatase
AL543_RS06470	PF16385	AL543_RS06470
AL543_RS06475	PF00990	GGDEF domain
AL543_RS06480	PF02278	Polysaccharide lyase family 8, super-sandwich domain
AL543_RS06480	PF02884	Polysaccharide lyase family 8, C-terminal beta-sandwich domain
AL543_RS06480	PF08124	Polysaccharide lyase family 8, N terminal alpha-helical domain
AL543_RS06485	PF09508	Lacto-N-biose phosphorylase
AL543_RS06485	PF17385	AL543_RS06485
AL543_RS06485	PF17386	AL543_RS06485
AL543_RS06490	PF07470	Glycosyl Hydrolase Family 88
AL543_RS06495	PF13561	Enoyl-(Acyl carrier protein) reductase
AL543_RS06500	PF01087	Galactose-1-phosphate uridyl transferase, N-terminal domain
AL543_RS06500	PF02744	Galactose-1-phosphate uridyl transferase, C-terminal domain
AL543_RS06505	PF01081	KDPG and KHG aldolase
AL543_RS06510	PF00294	pfkB family carbohydrate kinase
AL543_RS06515	PF04962	KduI/IolB family
AL543_RS06520	PF03573	outer membrane porin, OprD family
AL543_RS06525	PF00491	Arginase family
AL543_RS06530	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
AL543_RS06535	PF12625	AL543_RS06535
AL543_RS06535	PF12833	Helix-turn-helix domain
AL543_RS06545	PF13533	Biotin-lipoyl like
AL543_RS06550	PF00924	Mechanosensitive ion channel
AL543_RS06555	PF01769	Divalent cation transporter
AL543_RS06555	PF03448	MgtE intracellular N domain
AL543_RS06560	PF00696	Amino acid kinase family
AL543_RS06565	PF06339	AL543_RS06565
AL543_RS06570	PF00202	Aminotransferase class-III
AL543_RS06575	PF00583	Acetyltransferase (GNAT) family
AL543_RS06580	PF06445	GyrI-like small molecule binding domain
AL543_RS06580	PF12833	Helix-turn-helix domain
AL543_RS06585	PF02311	AraC-like ligand binding domain
AL543_RS06585	PF12833	Helix-turn-helix domain
AL543_RS06590	PF01554	MatE
AL543_RS06595	PF13505	Outer membrane protein beta-barrel domain
AL543_RS06600	PF01329	Pterin 4 alpha carbinolamine dehydratase
AL543_RS06605	PF00351	Biopterin-dependent aromatic amino acid hydroxylase
AL543_RS06610	PF00501	AMP-binding enzyme
AL543_RS06610	PF13193	AMP-binding enzyme C-terminal domain
AL543_RS06615	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS06615	PF03466	LysR substrate binding domain
AL543_RS06625	PF13489	Methyltransferase domain
AL543_RS06635	PF00132	Bacterial transferase hexapeptide (six repeats)
AL543_RS06635	PF12464	Maltose acetyltransferase
AL543_RS06635	PF14602	Hexapeptide repeat of succinyl-transferase
AL543_RS06640	PF01595	AL543_RS06640
AL543_RS06640	PF03471	Transporter associated domain
AL543_RS06645	PF02566	OsmC-like protein
AL543_RS06650	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
AL543_RS06655	PF00563	EAL domain
AL543_RS06655	PF00990	GGDEF domain
AL543_RS06660	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AL543_RS06660	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
AL543_RS06670	PF01810	AL543_RS06670
AL543_RS06675	PF13520	Amino acid permease
AL543_RS06680	PF00990	GGDEF domain
AL543_RS06690	PF00072	Response regulator receiver domain
AL543_RS06690	PF04397	LytTr DNA-binding domain
AL543_RS06695	PF06580	AL543_RS06695
AL543_RS06705	PF17131	AL543_RS06705
AL543_RS06710	PF02687	AL543_RS06710
AL543_RS06710	PF12704	MacB-like periplasmic core domain
AL543_RS06715	PF00005	ABC transporter
AL543_RS06725	PF00248	Aldo/keto reductase family
AL543_RS06730	PF00128	Alpha amylase, catalytic domain
AL543_RS06735	PF13358	DDE superfamily endonuclease
AL543_RS06735	PF13384	Homeodomain-like domain
AL543_RS06735	PF13592	AL543_RS06735
AL543_RS06750	PF01609	Transposase DDE domain
AL543_RS06765	PF01447	Thermolysin metallopeptidase, catalytic domain
AL543_RS06765	PF02868	Thermolysin metallopeptidase, alpha-helical domain
AL543_RS06765	PF03413	Peptidase propeptide and YPEB domain
AL543_RS06765	PF04151	Bacterial pre-peptidase C-terminal domain
AL543_RS06765	PF07504	Fungalysin/Thermolysin Propeptide Motif
AL543_RS06770	PF03922	OmpW family
AL543_RS06780	PF00768	D-alanyl-D-alanine carboxypeptidase
AL543_RS06790	PF01336	OB-fold nucleic acid binding domain
AL543_RS06790	PF07733	Bacterial DNA polymerase III alpha subunit
AL543_RS06790	PF14579	Helix-hairpin-helix motif
AL543_RS06795	PF01351	Ribonuclease HII
AL543_RS06800	PF02684	AL543_RS06800
AL543_RS06805	PF00132	Bacterial transferase hexapeptide (six repeats)
AL543_RS06805	PF13720	Udp N-acetylglucosamine O-acyltransferase; Domain 2
AL543_RS06810	PF07977	FabA-like domain
AL543_RS06815	PF00132	Bacterial transferase hexapeptide (six repeats)
AL543_RS06815	PF04613	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD
AL543_RS06820	PF03938	Outer membrane protein (OmpH-like)
AL543_RS06825	PF01103	Surface antigen
AL543_RS06825	PF07244	Surface antigen variable number repeat
AL543_RS06830	PF00595	PDZ domain (Also known as DHR or GLGF)
AL543_RS06830	PF02163	Peptidase family M50
AL543_RS06835	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
AL543_RS06835	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal
AL543_RS06835	PF13288	DXP reductoisomerase C-terminal domain
AL543_RS06840	PF01148	Cytidylyltransferase family
AL543_RS06845	PF01255	Putative undecaprenyl diphosphate synthase
AL543_RS06850	PF01765	Ribosome recycling factor
AL543_RS06855	PF00696	Amino acid kinase family
AL543_RS06860	PF00889	Elongation factor TS
AL543_RS06865	PF00318	Ribosomal protein S2
AL543_RS06870	PF00557	Metallopeptidase family M24
AL543_RS06875	PF01909	Nucleotidyltransferase domain
AL543_RS06875	PF01966	HD domain
AL543_RS06875	PF08335	GlnD PII-uridylyltransferase
AL543_RS06880	PF11944	AL543_RS06880
AL543_RS06885	PF04608	Phosphatidylglycerophosphatase A
AL543_RS06890	PF00586	AIR synthase related protein, N-terminal domain
AL543_RS06890	PF02769	AIR synthase related protein, C-terminal domain
AL543_RS06895	PF01029	NusB family
AL543_RS06900	PF00885	6,7-dimethyl-8-ribityllumazine synthase
AL543_RS06905	PF00925	GTP cyclohydrolase II
AL543_RS06905	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
AL543_RS06910	PF00677	Lumazine binding domain
AL543_RS06915	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
AL543_RS06915	PF01872	RibD C-terminal domain
AL543_RS06920	PF03477	ATP cone domain
AL543_RS06925	PF00171	Aldehyde dehydrogenase family
AL543_RS06930	PF00696	Amino acid kinase family
AL543_RS06930	PF01472	PUA domain
AL543_RS06935	PF07417	Transcriptional regulator Crl
AL543_RS06940	PF06500	Alpha/beta hydrolase of unknown function (DUF1100)
AL543_RS06945	PF00156	Phosphoribosyl transferase domain
AL543_RS06950	PF00860	Permease family
AL543_RS06955	PF01546	Peptidase family M20/M25/M40
AL543_RS06955	PF07687	Peptidase dimerisation domain
AL543_RS06960	PF05618	Putative ATP-dependant zinc protease
AL543_RS06965	PF08443	RimK-like ATP-grasp domain
AL543_RS06970	PF04952	Succinylglutamate desuccinylase / Aspartoacylase family
AL543_RS06975	PF00209	Sodium:neurotransmitter symporter family
AL543_RS06980	PF00990	GGDEF domain
AL543_RS06980	PF05228	AL543_RS06980
AL543_RS06985	PF11101	AL543_RS06985
AL543_RS06990	PF00817	impB/mucB/samB family
AL543_RS06990	PF11798	IMS family HHH motif
AL543_RS06990	PF11799	impB/mucB/samB family C-terminal domain
AL543_RS06995	PF04400	AL543_RS06995
AL543_RS07000	PF02424	ApbE family
AL543_RS07010	PF00111	2Fe-2S iron-sulfur cluster binding domain
AL543_RS07010	PF00175	Oxidoreductase NAD-binding domain
AL543_RS07010	PF00970	Oxidoreductase FAD-binding domain
AL543_RS07015	PF02508	AL543_RS07015
AL543_RS07020	PF02508	AL543_RS07020
AL543_RS07025	PF04205	FMN-binding domain
AL543_RS07030	PF03116	AL543_RS07030
AL543_RS07035	PF05896	AL543_RS07035
AL543_RS07035	PF11973	AL543_RS07035
AL543_RS07040	PF01722	BolA-like protein
AL543_RS07045	PF05175	Methyltransferase small domain
AL543_RS07050	PF03923	AL543_RS07050
AL543_RS07055	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
AL543_RS07060	PF07690	Major Facilitator Superfamily
AL543_RS07065	PF12973	ChrR Cupin-like domain
AL543_RS07065	PF13490	Putative zinc-finger
AL543_RS07070	PF04542	Sigma-70 region 2
AL543_RS07070	PF04545	Sigma-70, region 4
AL543_RS07075	PF02190	ATP-dependent protease La (LON) domain
AL543_RS07080	PF03502	Nucleoside-specific channel-forming protein, Tsx
AL543_RS07085	PF02558	Ketopantoate reductase PanE/ApbA
AL543_RS07085	PF08546	Ketopantoate reductase PanE/ApbA C terminal
AL543_RS07090	PF01965	DJ-1/PfpI family
AL543_RS07095	PF00266	Aminotransferase class-V
AL543_RS07100	PF02657	Fe-S metabolism associated domain
AL543_RS07105	PF00899	ThiF family
AL543_RS07110	PF03562	MltA specific insert domain
AL543_RS07110	PF06725	3D domain
AL543_RS07115	PF11012	AL543_RS07115
AL543_RS07120	PF00583	Acetyltransferase (GNAT) family
AL543_RS07120	PF00696	Amino acid kinase family
AL543_RS07130	PF13538	UvrD-like helicase C-terminal domain
AL543_RS07130	PF13604	AAA domain
AL543_RS07135	PF00580	UvrD/REP helicase N-terminal domain
AL543_RS07135	PF12705	PD-(D/E)XK nuclease superfamily
AL543_RS07135	PF13361	UvrD-like helicase C-terminal domain
AL543_RS07140	PF04257	Exodeoxyribonuclease V, gamma subunit
AL543_RS07145	PF03595	Voltage-dependent anion channel
AL543_RS07150	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS07150	PF03466	LysR substrate binding domain
AL543_RS07155	PF07130	YebG protein
AL543_RS07165	PF14602	Hexapeptide repeat of succinyl-transferase
AL543_RS07165	PF14789	Tetrahydrodipicolinate N-succinyltransferase middle
AL543_RS07165	PF14790	Tetrahydrodipicolinate N-succinyltransferase N-terminal
AL543_RS07170	PF01797	Transposase IS200 like
AL543_RS07175	PF05940	AL543_RS07175
AL543_RS07180	PF00583	Acetyltransferase (GNAT) family
AL543_RS07180	PF11814	AL543_RS07180
AL543_RS07185	PF08443	RimK-like ATP-grasp domain
AL543_RS07185	PF14401	AL543_RS07185
AL543_RS07190	PF01544	CorA-like Mg2+ transporter protein
AL543_RS07195	PF06094	AIG2-like family
AL543_RS07200	PF01588	Putative tRNA binding domain
AL543_RS07205	PF00356	Bacterial regulatory proteins, lacI family
AL543_RS07205	PF13377	Periplasmic binding protein-like domain
AL543_RS07210	PF01609	Transposase DDE domain
AL543_RS07210	PF13006	AL543_RS07210
AL543_RS07215	PF00703	Glycosyl hydrolases family 2
AL543_RS07215	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
AL543_RS07215	PF02837	Glycosyl hydrolases family 2, sugar binding domain
AL543_RS07215	PF02929	Beta galactosidase small chain
AL543_RS07215	PF16353	AL543_RS07215
AL543_RS07220	PF02417	AL543_RS07220
AL543_RS07225	PF13487	HD domain
AL543_RS07230	PF00501	AMP-binding enzyme
AL543_RS07240	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS07240	PF03466	LysR substrate binding domain
AL543_RS07245	PF00009	Elongation factor Tu GTP binding domain
AL543_RS07245	PF00679	Elongation factor G C-terminus
AL543_RS07245	PF03144	Elongation factor Tu domain 2
AL543_RS07245	PF03764	Elongation factor G, domain IV
AL543_RS07245	PF14492	Elongation Factor G, domain II
AL543_RS07250	PF13481	AAA domain
AL543_RS07250	PF13541	Subunit ChlI of Mg-chelatase
AL543_RS07255	PF07238	PilZ domain
AL543_RS07265	PF00702	haloacid dehalogenase-like hydrolase
AL543_RS07270	PF10144	AL543_RS07270
AL543_RS07275	PF01048	Phosphorylase superfamily
AL543_RS07280	PF01676	Metalloenzyme superfamily
AL543_RS07285	PF00591	Glycosyl transferase family, a/b domain
AL543_RS07285	PF02885	Glycosyl transferase family, helical bundle domain
AL543_RS07285	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
AL543_RS07290	PF01791	DeoC/LacD family aldolase
AL543_RS07300	PF01773	Na+ dependent nucleoside transporter N-terminus
AL543_RS07300	PF07662	Na+ dependent nucleoside transporter C-terminus
AL543_RS07300	PF07670	Nucleoside recognition
AL543_RS07305	PF01026	TatD related DNase
AL543_RS07310	PF03883	AL543_RS07310
AL543_RS07315	PF01235	AL543_RS07315
AL543_RS07320	PF12065	AL543_RS07320
AL543_RS07325	PF01814	Hemerythrin HHE cation binding domain
AL543_RS07330	PF03167	Uracil DNA glycosylase superfamily
AL543_RS07335	PF01261	Xylose isomerase-like TIM barrel
AL543_RS07340	PF01228	Glycine radical
AL543_RS07345	PF00291	Pyridoxal-phosphate dependent enzyme
AL543_RS07345	PF14821	Threonine synthase N terminus
AL543_RS07350	PF00288	GHMP kinases N terminal domain
AL543_RS07350	PF08544	GHMP kinases C terminal
AL543_RS07355	PF00696	Amino acid kinase family
AL543_RS07355	PF00742	Homoserine dehydrogenase
AL543_RS07355	PF01842	ACT domain
AL543_RS07355	PF03447	Homoserine dehydrogenase, NAD binding domain
AL543_RS07355	PF13840	ACT domain
AL543_RS07370	PF03737	Demethylmenaquinone methyltransferase
AL543_RS07375	PF11697	AL543_RS07375
AL543_RS07380	PF00072	Response regulator receiver domain
AL543_RS07380	PF00486	Transcriptional regulatory protein, C terminal
AL543_RS07385	PF00072	Response regulator receiver domain
AL543_RS07385	PF00512	His Kinase A (phospho-acceptor) domain
AL543_RS07385	PF00989	PAS fold
AL543_RS07385	PF01627	Hpt domain
AL543_RS07385	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS07390	PF00990	GGDEF domain
AL543_RS07390	PF08448	PAS fold
AL543_RS07390	PF13188	PAS domain
AL543_RS07395	PF04055	Radical SAM superfamily
AL543_RS07395	PF16199	AL543_RS07395
AL543_RS07400	PF00310	Glutamine amidotransferases class-II
AL543_RS07400	PF01493	GXGXG motif
AL543_RS07400	PF01645	Conserved region in glutamate synthase
AL543_RS07400	PF04898	Glutamate synthase central domain
AL543_RS07405	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL543_RS07405	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
AL543_RS07410	PF00310	Glutamine amidotransferases class-II
AL543_RS07410	PF01493	GXGXG motif
AL543_RS07410	PF01645	Conserved region in glutamate synthase
AL543_RS07410	PF04898	Glutamate synthase central domain
AL543_RS07415	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL543_RS07415	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
AL543_RS07420	PF07386	AL543_RS07420
AL543_RS07425	PF01048	Phosphorylase superfamily
AL543_RS07430	PF03186	AL543_RS07430
AL543_RS07435	PF01497	Periplasmic binding protein
AL543_RS07440	PF03458	AL543_RS07440
AL543_RS07445	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS07445	PF03466	LysR substrate binding domain
AL543_RS07450	PF01925	AL543_RS07450
AL543_RS07455	PF02142	MGS-like domain
AL543_RS07455	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AL543_RS07455	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AL543_RS07460	PF00117	Glutamine amidotransferase class-I
AL543_RS07460	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
AL543_RS07470	PF01113	Dihydrodipicolinate reductase, N-terminus
AL543_RS07470	PF05173	Dihydrodipicolinate reductase, C-terminus
AL543_RS07475	PF00293	NUDIX domain
AL543_RS07480	PF01043	SecA preprotein cross-linking domain
AL543_RS07480	PF02810	SEC-C motif
AL543_RS07480	PF07516	SecA Wing and Scaffold domain
AL543_RS07480	PF07517	SecA DEAD-like domain
AL543_RS07495	PF05258	AL543_RS07495
AL543_RS07500	PF03331	UDP-3-O-acyl N-acetylglycosamine deacetylase
AL543_RS07505	PF00091	Tubulin/FtsZ family, GTPase domain
AL543_RS07505	PF12327	FtsZ family, C-terminal domain
AL543_RS07510	PF02491	SHS2 domain inserted in FTSA
AL543_RS07510	PF14450	Cell division protein FtsA
AL543_RS07515	PF03799	Cell division protein FtsQ
AL543_RS07515	PF08478	POTRA domain, FtsQ-type
AL543_RS07520	PF01225	Mur ligase family, catalytic domain
AL543_RS07520	PF02875	Mur ligase family, glutamate ligase domain
AL543_RS07520	PF08245	Mur ligase middle domain
AL543_RS07525	PF03033	Glycosyltransferase family 28 N-terminal domain
AL543_RS07525	PF04101	Glycosyltransferase family 28 C-terminal domain
AL543_RS07530	PF01098	AL543_RS07530
AL543_RS07535	PF02875	Mur ligase family, glutamate ligase domain
AL543_RS07535	PF08245	Mur ligase middle domain
AL543_RS07540	PF00953	Glycosyl transferase family 4
AL543_RS07540	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1
AL543_RS07545	PF01225	Mur ligase family, catalytic domain
AL543_RS07545	PF02875	Mur ligase family, glutamate ligase domain
AL543_RS07545	PF08245	Mur ligase middle domain
AL543_RS07550	PF01225	Mur ligase family, catalytic domain
AL543_RS07550	PF02875	Mur ligase family, glutamate ligase domain
AL543_RS07550	PF08245	Mur ligase middle domain
AL543_RS07555	PF00905	Penicillin binding protein transpeptidase domain
AL543_RS07555	PF03717	Penicillin-binding Protein dimerisation domain
AL543_RS07560	PF04999	AL543_RS07560
AL543_RS07565	PF01795	MraW methylase family
AL543_RS07575	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AL543_RS07575	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL543_RS07580	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
AL543_RS07580	PF00364	Biotin-requiring enzyme
AL543_RS07580	PF02817	e3 binding domain
AL543_RS07585	PF00456	Transketolase, thiamine diphosphate binding domain
AL543_RS07590	PF00392	Bacterial regulatory proteins, gntR family
AL543_RS07590	PF07729	FCD domain
AL543_RS07600	PF00149	Calcineurin-like phosphoesterase
AL543_RS07600	PF02872	5'-nucleotidase, C-terminal domain
AL543_RS07605	PF01368	DHH family
AL543_RS07605	PF02833	DHHA2 domain
AL543_RS07610	PF01368	DHH family
AL543_RS07610	PF02272	DHHA1 domain
AL543_RS07615	PF10411	Disulfide bond isomerase protein N-terminus
AL543_RS07615	PF13098	Thioredoxin-like domain
AL543_RS07620	PF00589	Phage integrase family
AL543_RS07620	PF02899	Phage integrase, N-terminal SAM-like domain
AL543_RS07625	PF00258	Flavodoxin
AL543_RS07630	PF01510	N-acetylmuramoyl-L-alanine amidase
AL543_RS07635	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
AL543_RS07635	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
AL543_RS07640	PF07963	Prokaryotic N-terminal methylation motif
AL543_RS07645	PF00437	Type II/IV secretion system protein
AL543_RS07645	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
AL543_RS07650	PF00482	Type II secretion system (T2SS), protein F
AL543_RS07655	PF01478	Type IV leader peptidase family
AL543_RS07655	PF06750	AL543_RS07655
AL543_RS07660	PF01121	Dephospho-CoA kinase
AL543_RS07665	PF07072	Protein of unknown function (DUF1342)
AL543_RS07670	PF03884	Domain of unknown function (DUF329)
AL543_RS07675	PF00521	DNA gyrase/topoisomerase IV, subunit A
AL543_RS07675	PF03989	DNA gyrase C-terminal domain, beta-propeller
AL543_RS07680	PF00204	DNA gyrase B
AL543_RS07680	PF00986	DNA gyrase B subunit, carboxyl terminus
AL543_RS07680	PF01751	Toprim domain
AL543_RS07680	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS07685	PF05728	Uncharacterised protein family (UPF0227)
AL543_RS07690	PF00149	Calcineurin-like phosphoesterase
AL543_RS07695	PF06853	AL543_RS07695
AL543_RS07700	PF00293	NUDIX domain
AL543_RS07705	PF02321	Outer membrane efflux protein
AL543_RS07710	PF00294	pfkB family carbohydrate kinase
AL543_RS07710	PF01467	Cytidylyltransferase
AL543_RS07715	PF03710	Glutamate-ammonia ligase adenylyltransferase
AL543_RS07715	PF08335	GlnD PII-uridylyltransferase
AL543_RS07720	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS07725	PF00520	Ion transport protein
AL543_RS07730	PF01928	CYTH domain
AL543_RS07730	PF05235	CHAD domain
AL543_RS07735	PF01865	Protein of unknown function DUF47
AL543_RS07745	PF01384	AL543_RS07745
AL543_RS07750	PF08239	Bacterial SH3 domain
AL543_RS07755	PF16537	AL543_RS07755
AL543_RS07760	PF01471	Putative peptidoglycan binding domain
AL543_RS07760	PF13401	AAA domain
AL543_RS07765	PF01743	Poly A polymerase head domain
AL543_RS07765	PF01966	HD domain
AL543_RS07765	PF12627	Probable RNA and SrmB- binding site of polymerase A
AL543_RS07770	PF01212	Beta-eliminating lyase
AL543_RS07775	PF03222	Tryptophan/tyrosine permease family
AL543_RS07780	PF08543	Phosphomethylpyrimidine kinase
AL543_RS07785	PF00113	Enolase, C-terminal TIM barrel domain
AL543_RS07785	PF03952	Enolase, N-terminal domain
AL543_RS07790	PF00117	Glutamine amidotransferase class-I
AL543_RS07790	PF06418	CTP synthase N-terminus
AL543_RS07795	PF03819	MazG nucleotide pyrophosphohydrolase domain
AL543_RS07800	PF02824	TGS domain
AL543_RS07800	PF04607	Region found in RelA / SpoT proteins
AL543_RS07800	PF13291	ACT domain
AL543_RS07800	PF13328	HD domain
AL543_RS07805	PF01938	TRAM domain
AL543_RS07805	PF05958	tRNA (Uracil-5-)-methyltransferase
AL543_RS07810	PF00072	Response regulator receiver domain
AL543_RS07810	PF00512	His Kinase A (phospho-acceptor) domain
AL543_RS07810	PF01627	Hpt domain
AL543_RS07810	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS07810	PF09984	AL543_RS07810
AL543_RS07815	PF00990	GGDEF domain
AL543_RS07830	PF01648	4'-phosphopantetheinyl transferase superfamily
AL543_RS07835	PF03740	Pyridoxal phosphate biosynthesis protein PdxJ
AL543_RS07840	PF02565	Recombination protein O C terminal
AL543_RS07840	PF11967	Recombination protein O N terminal
AL543_RS07845	PF01926	50S ribosome-binding GTPase
AL543_RS07845	PF07650	KH domain
AL543_RS07850	PF00035	Double-stranded RNA binding motif
AL543_RS07850	PF14622	Ribonuclease-III-like
AL543_RS07855	PF00717	Peptidase S24-like
AL543_RS07855	PF10502	Signal peptidase, peptidase S26
AL543_RS07860	PF00009	Elongation factor Tu GTP binding domain
AL543_RS07860	PF00679	Elongation factor G C-terminus
AL543_RS07860	PF03144	Elongation factor Tu domain 2
AL543_RS07860	PF06421	GTP-binding protein LepA C-terminus
AL543_RS07865	PF04246	AL543_RS07865
AL543_RS07870	PF03888	MucB/RseB family
AL543_RS07870	PF17188	AL543_RS07870
AL543_RS07875	PF03872	Anti sigma-E protein RseA, N-terminal domain
AL543_RS07875	PF03873	Anti sigma-E protein RseA, C-terminal domain
AL543_RS07880	PF04542	Sigma-70 region 2
AL543_RS07880	PF08281	Sigma-70, region 4
AL543_RS07890	PF00890	FAD binding domain
AL543_RS07890	PF02910	Fumarate reductase flavoprotein C-term
AL543_RS07900	PF03937	Flavinator of succinate dehydrogenase
AL543_RS07905	PF01571	Aminomethyltransferase folate-binding domain
AL543_RS07910	PF06526	Protein of unknown function (DUF1107)
AL543_RS07915	PF01494	FAD binding domain
AL543_RS07920	PF01494	FAD binding domain
AL543_RS07925	PF03695	Uncharacterised protein family (UPF0149)
AL543_RS07930	PF05164	Cell division protein ZapA
AL543_RS07940	PF01812	5-formyltetrahydrofolate cyclo-ligase family
AL543_RS07945	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
AL543_RS07950	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AL543_RS07950	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL543_RS07955	PF10369	Small subunit of acetolactate synthase
AL543_RS07955	PF13710	ACT domain
AL543_RS07960	PF00205	Thiamine pyrophosphate enzyme, central domain
AL543_RS07960	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AL543_RS07960	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AL543_RS07965	PF00501	AMP-binding enzyme
AL543_RS07970	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS07970	PF03466	LysR substrate binding domain
AL543_RS07975	PF13528	Glycosyl transferase family 1
AL543_RS07980	PF01569	PAP2 superfamily
AL543_RS07985	PF00440	Bacterial regulatory proteins, tetR family
AL543_RS07985	PF14514	Transcriptional regulator, TetR, C-terminal
AL543_RS07995	PF00682	HMGL-like
AL543_RS07995	PF08502	LeuA allosteric (dimerisation) domain
AL543_RS08000	PF00180	Isocitrate/isopropylmalate dehydrogenase
AL543_RS08005	PF00330	Aconitase family (aconitate hydratase)
AL543_RS08010	PF00694	Aconitase C-terminal domain
AL543_RS08015	PF04784	AL543_RS08015
AL543_RS08065	PF01966	HD domain
AL543_RS08065	PF11871	AL543_RS08065
AL543_RS08075	PF06271	AL543_RS08075
AL543_RS08080	PF03739	AL543_RS08080
AL543_RS08085	PF03739	AL543_RS08085
AL543_RS08090	PF00883	Cytosol aminopeptidase family, catalytic domain
AL543_RS08090	PF02789	Cytosol aminopeptidase family, N-terminal domain
AL543_RS08095	PF04364	DNA polymerase III chi subunit, HolC
AL543_RS08100	PF00133	tRNA synthetases class I (I, L, M and V)
AL543_RS08100	PF08264	Anticodon-binding domain of tRNA
AL543_RS08100	PF10458	Valyl tRNA synthetase tRNA binding arm
AL543_RS08110	PF01435	Peptidase family M48
AL543_RS08115	PF05987	AL543_RS08115
AL543_RS08120	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AL543_RS08120	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL543_RS08125	PF00849	RNA pseudouridylate synthase
AL543_RS08130	PF00176	SNF2 family N-terminal domain
AL543_RS08130	PF00271	Helicase conserved C-terminal domain
AL543_RS08130	PF12137	RNA polymerase recycling family C-terminal
AL543_RS08140	PF02562	PhoH-like protein
AL543_RS08140	PF13638	PIN domain
AL543_RS08145	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
AL543_RS08145	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
AL543_RS08155	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
AL543_RS08155	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
AL543_RS08160	PF01948	Aspartate carbamoyltransferase regulatory chain, allosteric domain
AL543_RS08160	PF02748	Aspartate carbamoyltransferase regulatory chain, metal binding domain
AL543_RS08170	PF01042	Endoribonuclease L-PSP
AL543_RS08175	PF01553	Acyltransferase
AL543_RS08180	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
AL543_RS08185	PF01722	BolA-like protein
AL543_RS08190	PF13466	STAS domain
AL543_RS08195	PF05494	Toluene tolerance, Ttg2
AL543_RS08200	PF02470	AL543_RS08200
AL543_RS08205	PF02405	AL543_RS08205
AL543_RS08210	PF00005	ABC transporter
AL543_RS08215	PF01699	Sodium/calcium exchanger protein
AL543_RS08220	PF00571	CBS domain
AL543_RS08220	PF01380	SIS domain
AL543_RS08225	PF08282	haloacid dehalogenase-like hydrolase
AL543_RS08230	PF06835	Lipopolysaccharide-assembly, LptC-related
AL543_RS08235	PF03968	OstA-like protein
AL543_RS08240	PF00005	ABC transporter
AL543_RS08240	PF12399	Branched-chain amino acid ATP-binding cassette transporter
AL543_RS08245	PF00309	AL543_RS08245
AL543_RS08245	PF04552	Sigma-54, DNA binding domain
AL543_RS08245	PF04963	Sigma-54 factor, core binding domain
AL543_RS08250	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
AL543_RS08255	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL543_RS08260	PF03668	AL543_RS08260
AL543_RS08265	PF00381	PTS HPr component phosphorylation site
AL543_RS08270	PF00571	CBS domain
AL543_RS08270	PF01769	Divalent cation transporter
AL543_RS08270	PF03448	MgtE intracellular N domain
AL543_RS08275	PF01523	Putative modulator of DNA gyrase
AL543_RS08280	PF04751	Protein of unknown function (DUF615)
AL543_RS08285	PF00005	ABC transporter
AL543_RS08290	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS08295	PF13343	Bacterial extracellular solute-binding protein
AL543_RS08300	PF02441	Flavoprotein
AL543_RS08305	PF01225	Mur ligase family, catalytic domain
AL543_RS08305	PF02875	Mur ligase family, glutamate ligase domain
AL543_RS08305	PF08245	Mur ligase middle domain
AL543_RS08315	PF00316	Fructose-1-6-bisphosphatase
AL543_RS08320	PF00719	Inorganic pyrophosphatase
AL543_RS08325	PF10973	AL543_RS08325
AL543_RS08330	PF06094	AIG2-like family
AL543_RS08335	PF04357	AL543_RS08335
AL543_RS08340	PF01103	Surface antigen
AL543_RS08340	PF17243	AL543_RS08340
AL543_RS08345	PF01625	Peptide methionine sulfoxide reductase
AL543_RS08350	PF09695	AL543_RS08350
AL543_RS08355	PF10795	AL543_RS08355
AL543_RS08360	PF10986	AL543_RS08360
AL543_RS08365	PF00005	ABC transporter
AL543_RS08370	PF02687	AL543_RS08370
AL543_RS08370	PF12704	MacB-like periplasmic core domain
AL543_RS08375	PF11736	Protein of unknown function (DUF3299)
AL543_RS08380	PF10987	AL543_RS08380
AL543_RS08385	PF01583	Adenylylsulphate kinase
AL543_RS08390	PF00009	Elongation factor Tu GTP binding domain
AL543_RS08395	PF01507	Phosphoadenosine phosphosulfate reductase family
AL543_RS08400	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
AL543_RS08405	PF00149	Calcineurin-like phosphoesterase
AL543_RS08405	PF02872	5'-nucleotidase, C-terminal domain
AL543_RS08415	PF00270	DEAD/DEAH box helicase
AL543_RS08415	PF00271	Helicase conserved C-terminal domain
AL543_RS08415	PF03880	DbpA RNA binding domain
AL543_RS08420	PF13673	Acetyltransferase (GNAT) domain
AL543_RS08425	PF00892	EamA-like transporter family
AL543_RS08430	PF04225	Opacity-associated protein A LysM-like domain
AL543_RS08430	PF08525	AL543_RS08430
AL543_RS08435	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AL543_RS08435	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
AL543_RS08440	PF11075	AL543_RS08440
AL543_RS08445	PF01196	Ribosomal protein L17
AL543_RS08450	PF01000	RNA polymerase Rpb3/RpoA insert domain
AL543_RS08450	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
AL543_RS08450	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
AL543_RS08455	PF00163	Ribosomal protein S4/S9 N-terminal domain
AL543_RS08455	PF01479	S4 domain
AL543_RS08460	PF00411	Ribosomal protein S11
AL543_RS08465	PF00416	Ribosomal protein S13/S18
AL543_RS08470	PF00444	Ribosomal protein L36
AL543_RS08475	PF00344	SecY translocase
AL543_RS08480	PF00828	Ribosomal protein L18e/L15
AL543_RS08485	PF00327	Ribosomal protein L30p/L7e
AL543_RS08490	PF00333	Ribosomal protein S5, N-terminal domain
AL543_RS08490	PF03719	Ribosomal protein S5, C-terminal domain
AL543_RS08495	PF00861	Ribosomal L18p/L5e family
AL543_RS08500	PF00347	Ribosomal protein L6
AL543_RS08505	PF00410	Ribosomal protein S8
AL543_RS08510	PF00253	Ribosomal protein S14p/S29e
AL543_RS08515	PF00281	Ribosomal protein L5
AL543_RS08515	PF00673	ribosomal L5P family C-terminus
AL543_RS08520	PF00467	KOW motif
AL543_RS08520	PF17136	AL543_RS08520
AL543_RS08525	PF00238	Ribosomal protein L14p/L23e
AL543_RS08530	PF00366	Ribosomal protein S17
AL543_RS08535	PF00831	Ribosomal L29 protein
AL543_RS08540	PF00252	Ribosomal protein L16p/L10e
AL543_RS08545	PF00189	Ribosomal protein S3, C-terminal domain
AL543_RS08545	PF07650	KH domain
AL543_RS08550	PF00237	Ribosomal protein L22p/L17e
AL543_RS08555	PF00203	Ribosomal protein S19
AL543_RS08560	PF00181	Ribosomal Proteins L2, RNA binding domain
AL543_RS08560	PF03947	Ribosomal Proteins L2, C-terminal domain
AL543_RS08565	PF00276	Ribosomal protein L23
AL543_RS08570	PF00573	Ribosomal protein L4/L1 family
AL543_RS08575	PF00297	Ribosomal protein L3
AL543_RS08580	PF00338	Ribosomal protein S10p/S20e
AL543_RS08585	PF00588	SpoU rRNA Methylase family
AL543_RS08585	PF08032	RNA 2'-O ribose methyltransferase substrate binding
AL543_RS08590	PF00575	S1 RNA binding domain
AL543_RS08590	PF00773	RNB domain
AL543_RS08590	PF08206	Ribonuclease B OB domain
AL543_RS08590	PF08461	Ribonuclease R winged-helix domain
AL543_RS08595	PF00884	Sulfatase
AL543_RS08595	PF11893	AL543_RS08595
AL543_RS08600	PF08238	Sel1 repeat
AL543_RS08610	PF00709	Adenylosuccinate synthetase
AL543_RS08615	PF01112	Asparaginase
AL543_RS08620	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AL543_RS08625	PF09526	AL543_RS08625
AL543_RS08630	PF00999	Sodium/hydrogen exchanger family
AL543_RS08630	PF02254	TrkA-N domain
AL543_RS08635	PF02525	Flavodoxin-like fold
AL543_RS08640	PF00005	ABC transporter
AL543_RS08640	PF09496	Cenp-O kinetochore centromere component
AL543_RS08640	PF12848	ABC transporter
AL543_RS08645	PF09523	AL543_RS08645
AL543_RS08650	PF00561	alpha/beta hydrolase fold
AL543_RS08655	PF06794	Uncharacterised protein family (UPF0270)
AL543_RS08660	PF00485	Phosphoribulokinase / Uridine kinase family
AL543_RS08665	PF00027	Cyclic nucleotide-binding domain
AL543_RS08665	PF00325	Bacterial regulatory proteins, crp family
AL543_RS08670	PF07063	Domain of unknown function (DUF1338)
AL543_RS08675	PF00171	Aldehyde dehydrogenase family
AL543_RS08680	PF04958	Arginine N-succinyltransferase beta subunit
AL543_RS08685	PF00202	Aminotransferase class-III
AL543_RS08690	PF00117	Glutamine amidotransferase class-I
AL543_RS08695	PF00919	Uncharacterized protein family UPF0004
AL543_RS08695	PF04055	Radical SAM superfamily
AL543_RS08700	PF00932	Lamin Tail Domain
AL543_RS08705	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL543_RS08710	PF00579	tRNA synthetases class I (W and Y)
AL543_RS08715	PF13419	Haloacid dehalogenase-like hydrolase
AL543_RS08720	PF00834	Ribulose-phosphate 3 epimerase family
AL543_RS08725	PF02086	D12 class N6 adenine-specific DNA methyltransferase
AL543_RS08730	PF05036	Sporulation related domain
AL543_RS08730	PF13401	AAA domain
AL543_RS08735	PF01761	3-dehydroquinate synthase
AL543_RS08740	PF01202	Shikimate kinase
AL543_RS08745	PF00263	AL543_RS08745
AL543_RS08745	PF03958	Bacterial type II/III secretion system short domain
AL543_RS08745	PF07660	Secretin and TonB N terminus short domain
AL543_RS08750	PF04351	Pilus assembly protein, PilP
AL543_RS08755	PF04350	Pilus assembly protein, PilO
AL543_RS08760	PF05137	AL543_RS08760
AL543_RS08765	PF11104	Type IV pilus assembly protein PilM;
AL543_RS08770	PF00905	Penicillin binding protein transpeptidase domain
AL543_RS08770	PF00912	Transglycosylase
AL543_RS08770	PF17092	AL543_RS08770
AL543_RS08775	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS08775	PF03466	LysR substrate binding domain
AL543_RS08780	PF00462	Glutaredoxin
AL543_RS08780	PF08534	Redoxin
AL543_RS08785	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AL543_RS08785	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL543_RS08790	PF12292	AL543_RS08790
AL543_RS08795	PF00206	Lyase
AL543_RS08795	PF14698	Argininosuccinate lyase C-terminal
AL543_RS08800	PF00764	Arginosuccinate synthase
AL543_RS08805	PF00696	Amino acid kinase family
AL543_RS08810	PF01118	Semialdehyde dehydrogenase, NAD binding domain
AL543_RS08810	PF02774	Semialdehyde dehydrogenase, dimerisation domain
AL543_RS08815	PF01546	Peptidase family M20/M25/M40
AL543_RS08815	PF07687	Peptidase dimerisation domain
AL543_RS08820	PF00311	Phosphoenolpyruvate carboxylase
AL543_RS08825	PF03551	Transcriptional regulator PadR-like family
AL543_RS08825	PF10400	Virulence activator alpha C-term
AL543_RS08830	PF00132	Bacterial transferase hexapeptide (six repeats)
AL543_RS08830	PF06426	Serine acetyltransferase, N-terminal
AL543_RS08835	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
AL543_RS08835	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
AL543_RS08840	PF02556	Preprotein translocase subunit SecB
AL543_RS08845	PF00581	Rhodanese-like domain
AL543_RS08850	PF00152	tRNA synthetases class II (D, K and N)
AL543_RS08855	PF00890	FAD binding domain
AL543_RS08855	PF02910	Fumarate reductase flavoprotein C-term
AL543_RS08860	PF13085	2Fe-2S iron-sulfur cluster binding domain
AL543_RS08860	PF13183	4Fe-4S dicluster domain
AL543_RS08865	PF02300	Fumarate reductase subunit C
AL543_RS08870	PF02313	Fumarate reductase subunit D
AL543_RS08875	PF01132	Elongation factor P (EF-P) OB domain
AL543_RS08875	PF08207	Elongation factor P (EF-P) KOW-like domain
AL543_RS08875	PF09285	Elongation factor P, C-terminal
AL543_RS08880	PF04055	Radical SAM superfamily
AL543_RS08880	PF13353	4Fe-4S single cluster domain
AL543_RS08900	PF00118	TCP-1/cpn60 chaperonin family
AL543_RS08905	PF00166	Chaperonin 10 Kd subunit
AL543_RS08910	PF13412	Winged helix-turn-helix DNA-binding
AL543_RS08915	PF11333	AL543_RS08915
AL543_RS08920	PF05656	AL543_RS08920
AL543_RS08925	PF02962	5-carboxymethyl-2-hydroxymuconate isomerase
AL543_RS08930	PF00121	Triosephosphate isomerase
AL543_RS08935	PF01554	MatE
AL543_RS08940	PF03737	Demethylmenaquinone methyltransferase
AL543_RS08945	PF01040	UbiA prenyltransferase family
AL543_RS08950	PF00004	ATPase family associated with various cellular activities (AAA)
AL543_RS08950	PF07724	AAA domain (Cdc48 subfamily)
AL543_RS08950	PF10431	C-terminal, D2-small domain, of ClpB protein
AL543_RS08955	PF00227	Proteasome subunit
AL543_RS08960	PF05036	Sporulation related domain
AL543_RS08965	PF00356	Bacterial regulatory proteins, lacI family
AL543_RS08965	PF13377	Periplasmic binding protein-like domain
AL543_RS08970	PF00270	DEAD/DEAH box helicase
AL543_RS08970	PF00271	Helicase conserved C-terminal domain
AL543_RS08975	PF01197	Ribosomal protein L31
AL543_RS08985	PF00390	Malic enzyme, N-terminal domain
AL543_RS08985	PF03949	Malic enzyme, NAD binding domain
AL543_RS08990	PF01340	Met Apo-repressor, MetJ
AL543_RS08995	PF01053	Cys/Met metabolism PLP-dependent enzyme
AL543_RS09000	PF00696	Amino acid kinase family
AL543_RS09000	PF00742	Homoserine dehydrogenase
AL543_RS09000	PF03447	Homoserine dehydrogenase, NAD binding domain
AL543_RS09005	PF02219	Methylenetetrahydrofolate reductase
AL543_RS09010	PF06005	Protein of unknown function (DUF904)
AL543_RS09015	PF03320	Bacterial fructose-1,6-bisphosphatase, glpX-encoded
AL543_RS09020	PF00365	Phosphofructokinase
AL543_RS09025	PF01545	Cation efflux family
AL543_RS09025	PF16916	AL543_RS09025
AL543_RS09030	PF07813	LTXXQ motif family protein
AL543_RS09035	PF00072	Response regulator receiver domain
AL543_RS09035	PF00486	Transcriptional regulatory protein, C terminal
AL543_RS09040	PF00512	His Kinase A (phospho-acceptor) domain
AL543_RS09040	PF00672	HAMP domain
AL543_RS09040	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS09040	PF16527	AL543_RS09040
AL543_RS09045	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
AL543_RS09045	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
AL543_RS09050	PF00588	SpoU rRNA Methylase family
AL543_RS09055	PF04186	AL543_RS09055
AL543_RS09060	PF00206	Lyase
AL543_RS09060	PF10415	Fumarase C C-terminus
AL543_RS09065	PF03605	AL543_RS09065
AL543_RS09070	PF02683	AL543_RS09070
AL543_RS09070	PF11412	Disulphide bond corrector protein DsbC
AL543_RS09070	PF13899	Thioredoxin-like
AL543_RS09075	PF00072	Response regulator receiver domain
AL543_RS09075	PF00196	Bacterial regulatory proteins, luxR family
AL543_RS09085	PF00999	Sodium/hydrogen exchanger family
AL543_RS09085	PF02080	TrkA-C domain
AL543_RS09085	PF03471	Transporter associated domain
AL543_RS09090	PF13937	AL543_RS09090
AL543_RS09095	PF00474	Sodium:solute symporter family
AL543_RS09100	PF02592	AL543_RS09100
AL543_RS09105	PF00625	Guanylate kinase
AL543_RS09110	PF01192	RNA polymerase Rpb6
AL543_RS09115	PF02824	TGS domain
AL543_RS09115	PF04607	Region found in RelA / SpoT proteins
AL543_RS09115	PF13291	ACT domain
AL543_RS09115	PF13328	HD domain
AL543_RS09120	PF00270	DEAD/DEAH box helicase
AL543_RS09120	PF00271	Helicase conserved C-terminal domain
AL543_RS09120	PF17191	AL543_RS09120
AL543_RS09125	PF00860	Permease family
AL543_RS09130	PF00512	His Kinase A (phospho-acceptor) domain
AL543_RS09130	PF00672	HAMP domain
AL543_RS09130	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS09135	PF00072	Response regulator receiver domain
AL543_RS09135	PF00486	Transcriptional regulatory protein, C terminal
AL543_RS09140	PF00933	Glycosyl hydrolase family 3 N terminal domain
AL543_RS09145	PF02653	AL543_RS09145
AL543_RS09150	PF00005	ABC transporter
AL543_RS09155	PF13407	Periplasmic binding protein domain
AL543_RS09160	PF00196	Bacterial regulatory proteins, luxR family
AL543_RS09165	PF01272	Transcription elongation factor, GreA/GreB, C-term
AL543_RS09165	PF03449	Transcription elongation factor, N-terminal
AL543_RS09170	PF00575	S1 RNA binding domain
AL543_RS09170	PF09371	Tex-like protein N-terminal domain
AL543_RS09170	PF12836	Helix-hairpin-helix motif
AL543_RS09170	PF16921	AL543_RS09170
AL543_RS09180	PF00561	alpha/beta hydrolase fold
AL543_RS09185	PF00156	Phosphoribosyl transferase domain
AL543_RS09190	PF01106	NifU-like domain
AL543_RS09190	PF01521	Iron-sulphur cluster biosynthesis
AL543_RS09195	PF00293	NUDIX domain
AL543_RS09200	PF00459	Inositol monophosphatase family
AL543_RS09205	PF01203	AL543_RS09205
AL543_RS09210	PF04612	Type II secretion system (T2SS), protein M
AL543_RS09215	PF05134	Type II secretion system (T2SS), protein L
AL543_RS09215	PF12693	GspL periplasmic domain
AL543_RS09220	PF03934	Type II secretion system (T2SS), protein K
AL543_RS09225	PF07963	Prokaryotic N-terminal methylation motif
AL543_RS09225	PF11612	Type II secretion system (T2SS), protein J
AL543_RS09230	PF02501	Type II secretion system (T2SS), protein I
AL543_RS09230	PF07963	Prokaryotic N-terminal methylation motif
AL543_RS09235	PF12019	Type II transport protein GspH
AL543_RS09240	PF07963	Prokaryotic N-terminal methylation motif
AL543_RS09240	PF08334	Type II secretion system (T2SS), protein G
AL543_RS09245	PF00482	Type II secretion system (T2SS), protein F
AL543_RS09250	PF00437	Type II/IV secretion system protein
AL543_RS09255	PF00263	AL543_RS09255
AL543_RS09255	PF03958	Bacterial type II/III secretion system short domain
AL543_RS09260	PF11356	Type IV pilus biogenesis
AL543_RS09265	PF01479	S4 domain
AL543_RS09270	PF01430	Hsp33 protein
AL543_RS09280	PF01293	Phosphoenolpyruvate carboxykinase
AL543_RS09285	PF05170	AL543_RS09285
AL543_RS09290	PF09500	Putative thioesterase (yiiD_Cterm)
AL543_RS09290	PF13673	Acetyltransferase (GNAT) domain
AL543_RS09295	PF02580	D-Tyr-tRNA(Tyr) deacylase
AL543_RS09300	PF03631	AL543_RS09300
AL543_RS09305	PF13521	AAA domain
AL543_RS09310	PF00009	Elongation factor Tu GTP binding domain
AL543_RS09310	PF00679	Elongation factor G C-terminus
AL543_RS09310	PF03144	Elongation factor Tu domain 2
AL543_RS09320	PF00120	Glutamine synthetase, catalytic domain
AL543_RS09320	PF03951	Glutamine synthetase, beta-Grasp domain
AL543_RS09325	PF13511	AL543_RS09325
AL543_RS09330	PF00512	His Kinase A (phospho-acceptor) domain
AL543_RS09330	PF00989	PAS fold
AL543_RS09330	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS09335	PF00072	Response regulator receiver domain
AL543_RS09335	PF00158	Sigma-54 interaction domain
AL543_RS09335	PF02954	Bacterial regulatory protein, Fis family
AL543_RS09340	PF00563	EAL domain
AL543_RS09340	PF00990	GGDEF domain
AL543_RS09340	PF02743	Cache domain
AL543_RS09345	PF00962	Adenosine/AMP deaminase
AL543_RS09355	PF13358	DDE superfamily endonuclease
AL543_RS09355	PF13384	Homeodomain-like domain
AL543_RS09355	PF13592	AL543_RS09355
AL543_RS09360	PF13592	AL543_RS09360
AL543_RS09365	PF13358	DDE superfamily endonuclease
AL543_RS09420	PF00076	RNA recognition motif
AL543_RS09425	PF01177	Asp/Glu/Hydantoin racemase
AL543_RS09430	PF00082	Subtilase family
AL543_RS09430	PF04151	Bacterial pre-peptidase C-terminal domain
AL543_RS09430	PF05922	Peptidase inhibitor I9
AL543_RS09435	PF00593	TonB dependent receptor
AL543_RS09435	PF07715	TonB-dependent Receptor Plug Domain
AL543_RS09440	PF05958	tRNA (Uracil-5-)-methyltransferase
AL543_RS09450	PF11726	AL543_RS09450
AL543_RS09455	PF01926	50S ribosome-binding GTPase
AL543_RS09460	PF05930	Prophage CP4-57 regulatory protein (AlpA)
AL543_RS09465	PF10980	Protein of unknown function (DUF2787)
AL543_RS09470	PF10980	Protein of unknown function (DUF2787)
AL543_RS09475	PF04002	RadC-like JAB domain
AL543_RS09480	PF13538	UvrD-like helicase C-terminal domain
AL543_RS09485	PF14267	AL543_RS09485
AL543_RS09490	PF02384	N-6 DNA Methylase
AL543_RS09490	PF12161	HsdM N-terminal domain
AL543_RS09495	PF01420	Type I restriction modification DNA specificity domain
AL543_RS09500	PF13166	AL543_RS09500
AL543_RS09505	PF13310	AL543_RS09505
AL543_RS09510	PF04313	Type I restriction enzyme R protein N terminus (HSDR_N)
AL543_RS09510	PF04851	Type III restriction enzyme, res subunit
AL543_RS09510	PF12008	Type I restriction and modification enzyme - subunit R C terminal
AL543_RS09515	PF00589	Phage integrase family
AL543_RS09515	PF13356	Domain of unknown function (DUF4102)
AL543_RS09520	PF07226	AL543_RS09520
AL543_RS09525	PF00440	Bacterial regulatory proteins, tetR family
AL543_RS09530	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AL543_RS09530	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL543_RS09535	PF00140	Sigma-70 factor, region 1
AL543_RS09535	PF04542	Sigma-70 region 2
AL543_RS09535	PF04545	Sigma-70, region 4
AL543_RS09545	PF00005	ABC transporter
AL543_RS09550	PF00448	SRP54-type protein, GTPase domain
AL543_RS09550	PF02881	SRP54-type protein, helical bundle domain
AL543_RS09555	PF03602	Conserved hypothetical protein 95
AL543_RS09560	PF06611	AL543_RS09560
AL543_RS09565	PF07947	AL543_RS09565
AL543_RS09580	PF10694	Protein of unknown function (DUF2500)
AL543_RS09585	PF01757	AL543_RS09585
AL543_RS09590	PF00210	Ferritin-like domain
AL543_RS09595	PF00563	EAL domain
AL543_RS09595	PF08668	HDOD domain
AL543_RS09600	PF01810	AL543_RS09600
AL543_RS09605	PF12146	Putative lysophospholipase
AL543_RS09610	PF08282	haloacid dehalogenase-like hydrolase
AL543_RS09620	PF03942	AL543_RS09620
AL543_RS09625	PF00563	EAL domain
AL543_RS09625	PF00990	GGDEF domain
AL543_RS09625	PF08495	AL543_RS09625
AL543_RS09630	PF13419	Haloacid dehalogenase-like hydrolase
AL543_RS09635	PF00589	Phage integrase family
AL543_RS09635	PF02899	Phage integrase, N-terminal SAM-like domain
AL543_RS09640	PF04340	Protein of unknown function, DUF484
AL543_RS09645	PF01678	Diaminopimelate epimerase
AL543_RS09650	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
AL543_RS09650	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
AL543_RS09655	PF13627	AL543_RS09655
AL543_RS09660	PF01491	Frataxin-like domain
AL543_RS09665	PF01295	AL543_RS09665
AL543_RS09665	PF12633	AL543_RS09665
AL543_RS09675	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
AL543_RS09675	PF03900	Porphobilinogen deaminase, C-terminal domain
AL543_RS09680	PF02602	Uroporphyrinogen-III synthase HemD
AL543_RS09685	PF04375	AL543_RS09685
AL543_RS09690	PF07219	AL543_RS09690
AL543_RS09695	PF04055	Radical SAM superfamily
AL543_RS09695	PF06969	HemN C-terminal domain
AL543_RS09700	PF10675	AL543_RS09700
AL543_RS09705	PF04220	AL543_RS09705
AL543_RS09710	PF13489	Methyltransferase domain
AL543_RS09715	PF00034	Cytochrome c
AL543_RS09720	PF01926	50S ribosome-binding GTPase
AL543_RS09730	PF00476	DNA polymerase family A
AL543_RS09730	PF01367	5'-3' exonuclease, C-terminal SAM fold
AL543_RS09730	PF01612	3'-5' exonuclease
AL543_RS09730	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
AL543_RS09735	PF00583	Acetyltransferase (GNAT) family
AL543_RS09740	PF00490	Delta-aminolevulinic acid dehydratase
AL543_RS09745	PF01026	TatD related DNase
AL543_RS09755	PF00581	Rhodanese-like domain
AL543_RS09760	PF01694	Rhomboid family
AL543_RS09760	PF12122	Protein of unknown function (DUF3582)
AL543_RS09765	PF03748	AL543_RS09765
AL543_RS09775	PF04345	Chorismate lyase
AL543_RS09780	PF01040	UbiA prenyltransferase family
AL543_RS09785	PF01553	Acyltransferase
AL543_RS09790	PF00717	Peptidase S24-like
AL543_RS09790	PF01726	LexA DNA binding domain
AL543_RS09795	PF04072	Leucine carboxyl methyltransferase
AL543_RS09800	PF01554	MatE
AL543_RS09805	PF00902	Sec-independent protein translocase protein (TatC)
AL543_RS09810	PF02416	mttA/Hcf106 family
AL543_RS09815	PF02416	mttA/Hcf106 family
AL543_RS09820	PF03109	AL543_RS09820
AL543_RS09825	PF02036	SCP-2 sterol transfer family
AL543_RS09830	PF01209	ubiE/COQ5 methyltransferase family
AL543_RS09835	PF02646	AL543_RS09835
AL543_RS09840	PF00892	EamA-like transporter family
AL543_RS09845	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS09845	PF08447	PAS fold
AL543_RS09855	PF13166	AL543_RS09855
AL543_RS09890	PF01609	Transposase DDE domain
AL543_RS09895	PF06527	AL543_RS09895
AL543_RS09895	PF15978	AL543_RS09895
AL543_RS09900	PF13401	AAA domain
AL543_RS09910	PF13358	DDE superfamily endonuclease
AL543_RS09910	PF13551	Winged helix-turn helix
AL543_RS09910	PF13592	AL543_RS09910
AL543_RS09920	PF08722	TnsA endonuclease N terminal
AL543_RS09925	PF03486	HI0933-like protein
AL543_RS09930	PF10625	AL543_RS09930
AL543_RS09935	PF00210	Ferritin-like domain
AL543_RS09945	PF00582	Universal stress protein family
AL543_RS09950	PF00892	EamA-like transporter family
AL543_RS09960	PF04445	Putative SAM-dependent methyltransferase
AL543_RS09965	PF00563	EAL domain
AL543_RS09965	PF00990	GGDEF domain
AL543_RS09965	PF13426	PAS domain
AL543_RS09970	PF01037	AsnC family
AL543_RS09970	PF13404	AsnC-type helix-turn-helix domain
AL543_RS09980	PF07690	Major Facilitator Superfamily
AL543_RS09985	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS09985	PF03466	LysR substrate binding domain
AL543_RS09990	PF00557	Metallopeptidase family M24
AL543_RS09990	PF01321	Creatinase/Prolidase N-terminal domain
AL543_RS09990	PF16188	AL543_RS09990
AL543_RS09990	PF16189	AL543_RS09990
AL543_RS09995	PF04055	Radical SAM superfamily
AL543_RS09995	PF06968	Biotin and Thiamin Synthesis associated domain
AL543_RS10000	PF05690	Thiazole biosynthesis protein ThiG
AL543_RS10005	PF02597	ThiS family
AL543_RS10010	PF00899	ThiF family
AL543_RS10015	PF02581	Thiamine monophosphate synthase/TENI
AL543_RS10020	PF01964	ThiC family
AL543_RS10020	PF13667	ThiC-associated domain
AL543_RS10025	PF02537	AL543_RS10025
AL543_RS10035	PF00589	Phage integrase family
AL543_RS10035	PF13356	Domain of unknown function (DUF4102)
AL543_RS10045	PF01380	SIS domain
AL543_RS10045	PF01418	Helix-turn-helix domain, rpiR family
AL543_RS10050	PF13580	SIS domain
AL543_RS10055	PF00367	phosphotransferase system, EIIB
AL543_RS10055	PF02378	Phosphotransferase system, EIIC
AL543_RS10070	PF13358	DDE superfamily endonuclease
AL543_RS10070	PF13551	Winged helix-turn helix
AL543_RS10070	PF13592	AL543_RS10070
AL543_RS10080	PF01420	Type I restriction modification DNA specificity domain
AL543_RS10085	PF13166	AL543_RS10085
AL543_RS10095	PF02384	N-6 DNA Methylase
AL543_RS10095	PF12161	HsdM N-terminal domain
AL543_RS10170	PF12724	Flavodoxin domain
AL543_RS10175	PF02386	Cation transport protein
AL543_RS10180	PF01205	Uncharacterized protein family UPF0029
AL543_RS10180	PF09186	Domain of unknown function (DUF1949)
AL543_RS10185	PF00378	Enoyl-CoA hydratase/isomerase family
AL543_RS10185	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
AL543_RS10185	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
AL543_RS10190	PF00108	Thiolase, N-terminal domain
AL543_RS10190	PF02803	Thiolase, C-terminal domain
AL543_RS10195	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS10195	PF03466	LysR substrate binding domain
AL543_RS10200	PF07690	Major Facilitator Superfamily
AL543_RS10205	PF00132	Bacterial transferase hexapeptide (six repeats)
AL543_RS10205	PF12804	MobA-like NTP transferase domain
AL543_RS10210	PF00401	ATP synthase, Delta/Epsilon chain, long alpha-helix domain
AL543_RS10210	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
AL543_RS10215	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AL543_RS10215	PF02874	ATP synthase alpha/beta family, beta-barrel domain
AL543_RS10220	PF00231	ATP synthase
AL543_RS10225	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AL543_RS10225	PF00306	ATP synthase alpha/beta chain, C terminal domain
AL543_RS10225	PF02874	ATP synthase alpha/beta family, beta-barrel domain
AL543_RS10230	PF00213	ATP synthase delta (OSCP) subunit
AL543_RS10235	PF00430	ATP synthase B/B' CF(0)
AL543_RS10240	PF00137	ATP synthase subunit C
AL543_RS10245	PF00119	ATP synthase A chain
AL543_RS10250	PF03899	AL543_RS10250
AL543_RS10255	PF02195	ParB-like nuclease domain
AL543_RS10260	PF13614	AAA domain
AL543_RS10265	PF02527	rRNA small subunit methyltransferase G
AL543_RS10270	PF01134	Glucose inhibited division protein A
AL543_RS10270	PF13932	GidA associated domain 3
AL543_RS10275	PF00258	Flavodoxin
AL543_RS10290	PF01926	50S ribosome-binding GTPase
AL543_RS10290	PF10396	GTP-binding protein TrmE N-terminus
AL543_RS10290	PF12631	Catalytic cysteine-containing C-terminus of GTPase, MnmE
AL543_RS10295	PF02096	60Kd inner membrane protein
AL543_RS10295	PF14849	YidC periplasmic domain
AL543_RS10300	PF01809	AL543_RS10300
AL543_RS10305	PF00825	Ribonuclease P
AL543_RS10310	PF00468	Ribosomal protein L34
AL543_RS10315	PF00005	ABC transporter
AL543_RS10320	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS10325	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL543_RS10330	PF00308	Bacterial dnaA  protein
AL543_RS10330	PF08299	Bacterial dnaA protein helix-turn-helix
AL543_RS10330	PF11638	DnaA N-terminal domain
AL543_RS10335	PF00712	DNA polymerase III beta subunit, N-terminal domain
AL543_RS10335	PF02767	DNA polymerase III beta subunit, central domain
AL543_RS10335	PF02768	DNA polymerase III beta subunit, C-terminal domain
AL543_RS10340	PF02463	RecF/RecN/SMC N terminal domain
AL543_RS10345	PF00204	DNA gyrase B
AL543_RS10345	PF00986	DNA gyrase B subunit, carboxyl terminus
AL543_RS10345	PF01751	Toprim domain
AL543_RS10345	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS10350	PF01272	Transcription elongation factor, GreA/GreB, C-term
AL543_RS10360	PF00011	Hsp20/alpha crystallin family
AL543_RS10365	PF00155	Aminotransferase class I and II
AL543_RS10370	PF02092	AL543_RS10370
AL543_RS10370	PF05746	DALR anticodon binding domain
AL543_RS10375	PF02091	Glycyl-tRNA synthetase alpha subunit
AL543_RS10380	PF01169	AL543_RS10380
AL543_RS10390	PF01206	Sulfurtransferase TusA
AL543_RS10400	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS10400	PF03466	LysR substrate binding domain
AL543_RS10405	PF00107	Zinc-binding dehydrogenase
AL543_RS10405	PF08240	Alcohol dehydrogenase GroES-like domain
AL543_RS10410	PF00291	Pyridoxal-phosphate dependent enzyme
AL543_RS10410	PF00585	C-terminal regulatory domain of Threonine dehydratase
AL543_RS10415	PF00920	Dehydratase family
AL543_RS10420	PF01063	Aminotransferase class IV
AL543_RS10425	PF13710	ACT domain
AL543_RS10430	PF00205	Thiamine pyrophosphate enzyme, central domain
AL543_RS10430	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AL543_RS10430	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AL543_RS10435	PF01078	Magnesium chelatase, subunit ChlI
AL543_RS10435	PF13335	AL543_RS10435
AL543_RS10435	PF13541	Subunit ChlI of Mg-chelatase
AL543_RS10440	PF01553	Acyltransferase
AL543_RS10445	PF01323	DSBA-like thioredoxin domain
AL543_RS10450	PF01636	Phosphotransferase enzyme family
AL543_RS10455	PF11614	IG-like fold at C-terminal of FixG, putative oxidoreductase
AL543_RS10455	PF12801	AL543_RS10455
AL543_RS10455	PF13746	4Fe-4S dicluster domain
AL543_RS10460	PF06288	Protein of unknown function (DUF1040)
AL543_RS10470	PF07070	AL543_RS10470
AL543_RS10475	PF03006	AL543_RS10475
AL543_RS10480	PF11355	AL543_RS10480
AL543_RS10485	PF02386	Cation transport protein
AL543_RS10490	PF02080	TrkA-C domain
AL543_RS10490	PF02254	TrkA-N domain
AL543_RS10495	PF01029	NusB family
AL543_RS10495	PF01189	NOL1/NOP2/sun family
AL543_RS10500	PF00551	Formyl transferase
AL543_RS10500	PF02911	Formyl transferase, C-terminal domain
AL543_RS10505	PF01327	Polypeptide deformylase
AL543_RS10510	PF01476	LysM domain
AL543_RS10515	PF02481	DNA recombination-mediator protein A
AL543_RS10520	PF04361	AL543_RS10520
AL543_RS10525	PF01396	AL543_RS10525
AL543_RS10530	PF02222	ATP-grasp domain
AL543_RS10535	PF00731	AIR carboxylase
AL543_RS10540	PF01300	Telomere recombination
AL543_RS10545	PF01218	Coproporphyrinogen III oxidase
AL543_RS10550	PF01488	Shikimate / quinate 5-dehydrogenase
AL543_RS10550	PF08501	Shikimate dehydrogenase substrate binding domain
AL543_RS10555	PF07369	Protein of unknown function (DUF1488)
AL543_RS10560	PF00132	Bacterial transferase hexapeptide (six repeats)
AL543_RS10600	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS10600	PF03466	LysR substrate binding domain
AL543_RS10605	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
AL543_RS10605	PF07991	Acetohydroxy acid isomeroreductase, catalytic domain
AL543_RS10610	PF04380	AL543_RS10610
AL543_RS10615	PF00873	AcrB/AcrD/AcrF family
AL543_RS10620	PF16576	AL543_RS10620
AL543_RS10625	PF00440	Bacterial regulatory proteins, tetR family
AL543_RS10630	PF00580	UvrD/REP helicase N-terminal domain
AL543_RS10630	PF13361	UvrD-like helicase C-terminal domain
AL543_RS10635	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
AL543_RS10665	PF00005	ABC transporter
AL543_RS10665	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL543_RS10670	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL543_RS10675	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS10680	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS10680	PF12911	AL543_RS10680
AL543_RS10690	PF07804	HipA-like C-terminal domain
AL543_RS10690	PF13657	HipA N-terminal domain
AL543_RS10695	PF13443	Cro/C1-type HTH DNA-binding domain
AL543_RS10705	PF01381	Helix-turn-helix
AL543_RS10725	PF01734	Patatin-like phospholipase
AL543_RS10735	PF00899	ThiF family
AL543_RS10735	PF14461	Prokaryotic E2 family B
AL543_RS10740	PF14464	Prokaryotic homologs of the JAB domain
AL543_RS10760	PF01609	Transposase DDE domain
AL543_RS10775	PF00589	Phage integrase family
AL543_RS10780	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AL543_RS10780	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL543_RS10785	PF04378	Ribosomal RNA small subunit methyltransferase D, RsmJ
AL543_RS10790	PF01432	Peptidase family M3
AL543_RS10795	PF00580	UvrD/REP helicase N-terminal domain
AL543_RS10795	PF13361	UvrD-like helicase C-terminal domain
AL543_RS10805	PF01810	AL543_RS10805
AL543_RS10810	PF02311	AraC-like ligand binding domain
AL543_RS10810	PF12833	Helix-turn-helix domain
AL543_RS10815	PF01019	Gamma-glutamyltranspeptidase
AL543_RS10820	PF00892	EamA-like transporter family
AL543_RS10825	PF00270	DEAD/DEAH box helicase
AL543_RS10825	PF00271	Helicase conserved C-terminal domain
AL543_RS10825	PF00570	HRDC domain
AL543_RS10825	PF09382	RQC domain
AL543_RS10825	PF16124	AL543_RS10825
AL543_RS10830	PF12305	AL543_RS10830
AL543_RS10835	PF01243	Pyridoxamine 5'-phosphate oxidase
AL543_RS10840	PF00593	TonB dependent receptor
AL543_RS10840	PF07715	TonB-dependent Receptor Plug Domain
AL543_RS10845	PF00005	ABC transporter
AL543_RS10850	PF01497	Periplasmic binding protein
AL543_RS10855	PF01032	FecCD transport family
AL543_RS10860	PF01380	SIS domain
AL543_RS10860	PF01418	Helix-turn-helix domain, rpiR family
AL543_RS10865	PF13580	SIS domain
AL543_RS10870	PF00367	phosphotransferase system, EIIB
AL543_RS10870	PF02378	Phosphotransferase system, EIIC
AL543_RS10875	PF03350	AL543_RS10875
AL543_RS10880	PF03755	AL543_RS10880
AL543_RS10880	PF08340	AL543_RS10880
AL543_RS10885	PF01138	3' exoribonuclease family, domain 1
AL543_RS10885	PF03725	3' exoribonuclease family, domain 2
AL543_RS10890	PF00156	Phosphoribosyl transferase domain
AL543_RS10895	PF01609	Transposase DDE domain
AL543_RS10895	PF13006	AL543_RS10895
AL543_RS10900	PF03279	AL543_RS10900
AL543_RS10905	PF03279	AL543_RS10905
AL543_RS10910	PF00440	Bacterial regulatory proteins, tetR family
AL543_RS10920	PF02441	Flavoprotein
AL543_RS10920	PF04127	DNA / pantothenate metabolism flavoprotein
AL543_RS10930	PF04002	RadC-like JAB domain
AL543_RS10935	PF00830	Ribosomal L28 family
AL543_RS10940	PF00471	Ribosomal protein L33
AL543_RS10950	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
AL543_RS10950	PF06827	Zinc finger found in FPG and IleRS
AL543_RS10950	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
AL543_RS10955	PF01467	Cytidylyltransferase
AL543_RS10960	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
AL543_RS10965	PF01609	Transposase DDE domain
AL543_RS10975	PF00535	Glycosyl transferase family 2
AL543_RS10980	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
AL543_RS10985	PF06293	Lipopolysaccharide kinase (Kdo/WaaP) family
AL543_RS10990	PF07507	AL543_RS10990
AL543_RS11005	PF08282	haloacid dehalogenase-like hydrolase
AL543_RS11010	PF00534	Glycosyl transferases group 1
AL543_RS11010	PF04413	3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
AL543_RS11015	PF04488	Glycosyltransferase sugar-binding region containing DXD motif
AL543_RS11020	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
AL543_RS11025	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
AL543_RS11030	PF01755	AL543_RS11030
AL543_RS11035	PF04932	AL543_RS11035
AL543_RS11040	PF00132	Bacterial transferase hexapeptide (six repeats)
AL543_RS11045	PF01522	Polysaccharide deacetylase
AL543_RS11045	PF13439	Glycosyltransferase Family 4
AL543_RS11050	PF01370	NAD dependent epimerase/dehydratase family
AL543_RS11055	PF02706	Chain length determinant protein
AL543_RS11055	PF13807	AL543_RS11055
AL543_RS11060	PF16363	AL543_RS11060
AL543_RS11065	PF01554	MatE
AL543_RS11070	PF13460	NADH(P)-binding
AL543_RS11075	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AL543_RS11075	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AL543_RS11080	PF04230	AL543_RS11080
AL543_RS11085	PF00535	Glycosyl transferase family 2
AL543_RS11090	PF13692	Glycosyl transferases group 1
AL543_RS11095	PF14897	AL543_RS11095
AL543_RS11100	PF00534	Glycosyl transferases group 1
AL543_RS11100	PF13477	Glycosyl transferase 4-like
AL543_RS11105	PF00953	Glycosyl transferase family 4
AL543_RS11115	PF00924	Mechanosensitive ion channel
AL543_RS11120	PF03167	Uracil DNA glycosylase superfamily
AL543_RS11125	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL543_RS11130	PF04222	Protein of unknown function (DUF416)
AL543_RS11135	PF00571	CBS domain
AL543_RS11135	PF01595	AL543_RS11135
AL543_RS11140	PF00216	Bacterial DNA-binding protein
AL543_RS11145	PF07356	AL543_RS11145
AL543_RS11145	PF08139	AL543_RS11145
AL543_RS11150	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
AL543_RS11150	PF02843	Phosphoribosylglycinamide synthetase, C domain
AL543_RS11150	PF02844	Phosphoribosylglycinamide synthetase, N domain
AL543_RS11155	PF01808	AICARFT/IMPCHase bienzyme
AL543_RS11155	PF02142	MGS-like domain
AL543_RS11165	PF00376	MerR family regulatory protein
AL543_RS11165	PF09278	MerR, DNA binding
AL543_RS11170	PF00486	Transcriptional regulatory protein, C terminal
AL543_RS11175	PF13520	Amino acid permease
AL543_RS11180	PF01276	Orn/Lys/Arg decarboxylase, major domain
AL543_RS11180	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
AL543_RS11180	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
AL543_RS11185	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS11185	PF00672	HAMP domain
AL543_RS11185	PF17200	AL543_RS11185
AL543_RS11190	PF16357	AL543_RS11190
AL543_RS11195	PF00593	TonB dependent receptor
AL543_RS11195	PF07715	TonB-dependent Receptor Plug Domain
AL543_RS11200	PF01081	KDPG and KHG aldolase
AL543_RS11205	PF02447	AL543_RS11205
AL543_RS11210	PF01202	Shikimate kinase
AL543_RS11215	PF00920	Dehydratase family
AL543_RS11220	PF00356	Bacterial regulatory proteins, lacI family
AL543_RS11220	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
AL543_RS11225	PF02954	Bacterial regulatory protein, Fis family
AL543_RS11230	PF01207	Dihydrouridine synthase (Dus)
AL543_RS11235	PF06325	Ribosomal protein L11 methyltransferase (PrmA)
AL543_RS11240	PF00289	Carbamoyl-phosphate synthase L chain, N-terminal domain
AL543_RS11240	PF02785	Biotin carboxylase C-terminal domain
AL543_RS11240	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AL543_RS11245	PF00364	Biotin-requiring enzyme
AL543_RS11250	PF01220	Dehydroquinase class II
AL543_RS11255	PF00501	AMP-binding enzyme
AL543_RS11255	PF13193	AMP-binding enzyme C-terminal domain
AL543_RS11255	PF16177	AL543_RS11255
AL543_RS11260	PF00929	Exonuclease
AL543_RS11265	PF00027	Cyclic nucleotide-binding domain
AL543_RS11265	PF00571	CBS domain
AL543_RS11265	PF03445	AL543_RS11265
AL543_RS11265	PF10335	AL543_RS11265
AL543_RS11270	PF12832	MFS_1 like family
AL543_RS11275	PF00072	Response regulator receiver domain
AL543_RS11275	PF00512	His Kinase A (phospho-acceptor) domain
AL543_RS11275	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS11275	PF12860	AL543_RS11275
AL543_RS11285	PF02541	Ppx/GppA phosphatase family
AL543_RS11290	PF00270	DEAD/DEAH box helicase
AL543_RS11290	PF00271	Helicase conserved C-terminal domain
AL543_RS11295	PF00085	Thioredoxin
AL543_RS11300	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AL543_RS11300	PF07497	Rho termination factor, RNA-binding domain
AL543_RS11300	PF07498	Rho termination factor, N-terminal domain
AL543_RS11310	PF01977	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
AL543_RS11315	PF00111	2Fe-2S iron-sulfur cluster binding domain
AL543_RS11320	PF00175	Oxidoreductase NAD-binding domain
AL543_RS11320	PF00970	Oxidoreductase FAD-binding domain
AL543_RS11360	PF13091	PLD-like domain
AL543_RS11365	PF13508	Acetyltransferase (GNAT) domain
AL543_RS11370	PF01565	FAD binding domain
AL543_RS11370	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
AL543_RS11375	PF02237	Biotin protein ligase C terminal domain
AL543_RS11375	PF03099	Biotin/lipoate A/B protein ligase family
AL543_RS11375	PF08279	HTH domain
AL543_RS11380	PF00485	Phosphoribulokinase / Uridine kinase family
AL543_RS11405	PF00009	Elongation factor Tu GTP binding domain
AL543_RS11405	PF03143	Elongation factor Tu C-terminal domain
AL543_RS11405	PF03144	Elongation factor Tu domain 2
AL543_RS11410	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
AL543_RS11415	PF00467	KOW motif
AL543_RS11415	PF02357	Transcription termination factor nusG
AL543_RS11420	PF00298	Ribosomal protein L11, RNA binding domain
AL543_RS11420	PF03946	Ribosomal protein L11, N-terminal domain
AL543_RS11425	PF00687	Ribosomal protein L1p/L10e family
AL543_RS11430	PF00466	Ribosomal protein L10
AL543_RS11435	PF00542	Ribosomal protein L7/L12 C-terminal domain
AL543_RS11435	PF16320	AL543_RS11435
AL543_RS11440	PF00562	RNA polymerase Rpb2, domain 6
AL543_RS11440	PF04560	RNA polymerase Rpb2, domain 7
AL543_RS11440	PF04561	RNA polymerase Rpb2, domain 2
AL543_RS11440	PF04563	RNA polymerase beta subunit
AL543_RS11440	PF04565	RNA polymerase Rpb2, domain 3
AL543_RS11440	PF10385	RNA polymerase beta subunit external 1 domain
AL543_RS11445	PF00623	RNA polymerase Rpb1, domain 2
AL543_RS11445	PF04983	RNA polymerase Rpb1, domain 3
AL543_RS11445	PF04997	RNA polymerase Rpb1, domain 1
AL543_RS11445	PF04998	RNA polymerase Rpb1, domain 5
AL543_RS11445	PF05000	RNA polymerase Rpb1, domain 4
AL543_RS11450	PF04353	Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ
AL543_RS11455	PF00293	NUDIX domain
AL543_RS11455	PF09297	NADH pyrophosphatase zinc ribbon domain
AL543_RS11460	PF01208	Uroporphyrinogen decarboxylase (URO-D)
AL543_RS11465	PF00440	Bacterial regulatory proteins, tetR family
AL543_RS11465	PF13972	Bacterial transcriptional repressor
AL543_RS11475	PF01551	Peptidase family M23
AL543_RS11480	PF01676	Metalloenzyme superfamily
AL543_RS11480	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
AL543_RS11485	PF00892	EamA-like transporter family
AL543_RS11490	PF00939	Sodium:sulfate symporter transmembrane region
AL543_RS11495	PF02666	AL543_RS11495
AL543_RS11500	PF03193	Protein of unknown function, DUF258
AL543_RS11505	PF00929	Exonuclease
AL543_RS11550	PF08331	AL543_RS11550
AL543_RS11550	PF13484	AL543_RS11550
AL543_RS11555	PF02367	Uncharacterised P-loop hydrolase UPF0079
AL543_RS11560	PF01476	LysM domain
AL543_RS11560	PF01520	N-acetylmuramoyl-L-alanine amidase
AL543_RS11560	PF11741	AMIN domain
AL543_RS11565	PF01119	DNA mismatch repair protein, C-terminal domain
AL543_RS11565	PF08676	MutL C terminal dimerisation domain
AL543_RS11565	PF13589	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS11570	PF01715	IPP transferase
AL543_RS11575	PF17209	AL543_RS11575
AL543_RS11580	PF01926	50S ribosome-binding GTPase
AL543_RS11580	PF13167	AL543_RS11580
AL543_RS11580	PF16360	AL543_RS11580
AL543_RS11585	PF01145	SPFH domain / Band 7 family
AL543_RS11585	PF12221	AL543_RS11585
AL543_RS11590	PF01145	SPFH domain / Band 7 family
AL543_RS11595	PF09838	AL543_RS11595
AL543_RS11600	PF04102	SlyX
AL543_RS11605	PF00400	WD domain, G-beta repeat
AL543_RS11610	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AL543_RS11610	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
AL543_RS11615	PF08348	AL543_RS11615
AL543_RS11615	PF13309	AL543_RS11615
AL543_RS11620	PF02635	DsrE/DsrF-like family
AL543_RS11625	PF02635	DsrE/DsrF-like family
AL543_RS11630	PF04077	DsrH like protein
AL543_RS11635	PF00164	Ribosomal protein S12/S23
AL543_RS11640	PF00177	Ribosomal protein S7p/S5e
AL543_RS11645	PF00009	Elongation factor Tu GTP binding domain
AL543_RS11645	PF00679	Elongation factor G C-terminus
AL543_RS11645	PF03144	Elongation factor Tu domain 2
AL543_RS11645	PF03764	Elongation factor G, domain IV
AL543_RS11645	PF14492	Elongation Factor G, domain II
AL543_RS11650	PF00009	Elongation factor Tu GTP binding domain
AL543_RS11650	PF03143	Elongation factor Tu C-terminal domain
AL543_RS11650	PF03144	Elongation factor Tu domain 2
AL543_RS11655	PF04324	BFD-like [2Fe-2S] binding domain
AL543_RS11660	PF00210	Ferritin-like domain
AL543_RS11665	PF01250	Ribosomal protein S6
AL543_RS11670	PF00436	Single-strand binding protein family
AL543_RS11675	PF01084	Ribosomal protein S18
AL543_RS11680	PF01281	Ribosomal protein L9, N-terminal domain
AL543_RS11680	PF03948	Ribosomal protein L9, C-terminal domain
AL543_RS11685	PF04338	Protein of unknown function, DUF481
AL543_RS11690	PF00772	DnaB-like helicase N terminal domain
AL543_RS11690	PF03796	DnaB-like helicase C terminal domain
AL543_RS11695	PF00842	Alanine racemase, C-terminal domain
AL543_RS11695	PF01168	Alanine racemase, N-terminal domain
AL543_RS11700	PF01894	Uncharacterised protein family UPF0047
AL543_RS11705	PF00342	Phosphoglucose isomerase
AL543_RS11710	PF13690	Chemotaxis phosphatase CheX
AL543_RS11715	PF01475	Ferric uptake regulator family
AL543_RS11720	PF01207	Dihydrouridine synthase (Dus)
AL543_RS11725	PF09583	AL543_RS11725
AL543_RS11730	PF13505	Outer membrane protein beta-barrel domain
AL543_RS11745	PF00175	Oxidoreductase NAD-binding domain
AL543_RS11745	PF00258	Flavodoxin
AL543_RS11745	PF00667	FAD binding domain
AL543_RS11750	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
AL543_RS11750	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
AL543_RS11755	PF01507	Phosphoadenosine phosphosulfate reductase family
AL543_RS11820	PF00999	Sodium/hydrogen exchanger family
AL543_RS11825	PF00809	Pterin binding enzyme
AL543_RS11825	PF02310	B12 binding domain
AL543_RS11825	PF02574	Homocysteine S-methyltransferase
AL543_RS11825	PF02607	B12 binding domain
AL543_RS11825	PF02965	Vitamin B12 dependent methionine synthase, activation domain
AL543_RS11830	PF00696	Amino acid kinase family
AL543_RS11835	PF00266	Aminotransferase class-V
AL543_RS11840	PF04932	AL543_RS11840
AL543_RS11840	PF11846	AL543_RS11840
AL543_RS11840	PF15864	AL543_RS11840
AL543_RS11845	PF00005	ABC transporter
AL543_RS11850	PF00483	Nucleotidyl transferase
AL543_RS11855	PF00196	Bacterial regulatory proteins, luxR family
AL543_RS11860	PF00436	Single-strand binding protein family
AL543_RS11865	PF00563	EAL domain
AL543_RS11865	PF00990	GGDEF domain
AL543_RS11865	PF17157	AL543_RS11865
AL543_RS11875	PF04612	Type II secretion system (T2SS), protein M
AL543_RS11885	PF00263	AL543_RS11885
AL543_RS11885	PF07655	AL543_RS11885
AL543_RS11890	PF13401	AAA domain
AL543_RS11900	PF00437	Type II/IV secretion system protein
AL543_RS11900	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
AL543_RS11905	PF00482	Type II secretion system (T2SS), protein F
AL543_RS11915	PF07963	Prokaryotic N-terminal methylation motif
AL543_RS11920	PF07963	Prokaryotic N-terminal methylation motif
AL543_RS11925	PF07963	Prokaryotic N-terminal methylation motif
AL543_RS11930	PF07963	Prokaryotic N-terminal methylation motif
AL543_RS11935	PF07963	Prokaryotic N-terminal methylation motif
AL543_RS11950	PF06723	MreB/Mbl protein
AL543_RS11955	PF04085	rod shape-determining protein MreC
AL543_RS11960	PF04093	AL543_RS11960
AL543_RS11965	PF02545	Maf-like protein
AL543_RS11970	PF00575	S1 RNA binding domain
AL543_RS11970	PF10150	Ribonuclease E/G family
AL543_RS11975	PF13116	AL543_RS11975
AL543_RS11975	PF13502	AL543_RS11975
AL543_RS11980	PF00795	Carbon-nitrogen hydrolase
AL543_RS11985	PF01523	Putative modulator of DNA gyrase
AL543_RS11990	PF03063	Prismane/CO dehydrogenase family
AL543_RS11995	PF00111	2Fe-2S iron-sulfur cluster binding domain
AL543_RS11995	PF00175	Oxidoreductase NAD-binding domain
AL543_RS11995	PF00970	Oxidoreductase FAD-binding domain
AL543_RS12000	PF02274	Amidinotransferase
AL543_RS12005	PF06877	Regulator of ribonuclease activity B
AL543_RS12010	PF01380	SIS domain
AL543_RS12010	PF01418	Helix-turn-helix domain, rpiR family
AL543_RS12015	PF01168	Alanine racemase, N-terminal domain
AL543_RS12015	PF14031	Putative serine dehydratase domain
AL543_RS12020	PF07969	Amidohydrolase family
AL543_RS12025	PF13358	DDE superfamily endonuclease
AL543_RS12025	PF13551	Winged helix-turn helix
AL543_RS12025	PF13592	AL543_RS12025
AL543_RS12030	PF01042	Endoribonuclease L-PSP
AL543_RS12040	PF01609	Transposase DDE domain
AL543_RS12045	PF00474	Sodium:solute symporter family
AL543_RS12050	PF00728	Glycosyl hydrolase family 20, catalytic domain
AL543_RS12050	PF02838	Glycosyl hydrolase family 20, domain 2
AL543_RS12055	PF10282	Lactonase, 7-bladed beta-propeller
AL543_RS12065	PF09834	AL543_RS12065
AL543_RS12070	PF00582	Universal stress protein family
AL543_RS12075	PF06808	AL543_RS12075
AL543_RS12075	PF11874	AL543_RS12075
AL543_RS12080	PF16868	AL543_RS12080
AL543_RS12090	PF01316	Arginine repressor, DNA binding domain
AL543_RS12090	PF02863	Arginine repressor, C-terminal domain
AL543_RS12095	PF00056	lactate/malate dehydrogenase, NAD binding domain
AL543_RS12095	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
AL543_RS12100	PF13520	Amino acid permease
AL543_RS12105	PF00348	Polyprenyl synthetase
AL543_RS12110	PF00829	Ribosomal prokaryotic L21 protein
AL543_RS12115	PF01016	Ribosomal L27 protein
AL543_RS12120	PF01018	GTP1/OBG
AL543_RS12120	PF01926	50S ribosome-binding GTPase
AL543_RS12125	PF06738	AL543_RS12125
AL543_RS12130	PF12821	AL543_RS12130
AL543_RS12135	PF00186	Dihydrofolate reductase
AL543_RS12140	PF00149	Calcineurin-like phosphoesterase
AL543_RS12145	PF04379	Protein of unknown function (DUF525)
AL543_RS12150	PF00398	Ribosomal RNA adenine dimethylase
AL543_RS12155	PF04166	Pyridoxal phosphate biosynthetic protein PdxA
AL543_RS12160	PF00639	PPIC-type PPIASE domain
AL543_RS12160	PF09312	SurA N-terminal domain
AL543_RS12160	PF13616	PPIC-type PPIASE domain
AL543_RS12165	PF03968	OstA-like protein
AL543_RS12165	PF04453	Organic solvent tolerance protein
AL543_RS12170	PF00226	DnaJ domain
AL543_RS12170	PF05099	Tellurite resistance protein TerB
AL543_RS12200	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS12200	PF17200	AL543_RS12200
AL543_RS12225	PF01464	Transglycosylase SLT domain
AL543_RS12225	PF11873	Domain of unknown function (DUF3393)
AL543_RS12230	PF04362	Bacterial Fe(2+) trafficking
AL543_RS12235	PF00633	Helix-hairpin-helix motif
AL543_RS12235	PF00730	HhH-GPD superfamily base excision DNA repair protein
AL543_RS12235	PF14815	NUDIX domain
AL543_RS12240	PF02390	Putative methyltransferase
AL543_RS12245	PF04960	Glutaminase
AL543_RS12250	PF00730	HhH-GPD superfamily base excision DNA repair protein
AL543_RS12255	PF04055	Radical SAM superfamily
AL543_RS12255	PF06969	HemN C-terminal domain
AL543_RS12260	PF01725	Ham1 family
AL543_RS12265	PF14467	Domain of unknown function (DUF4426)
AL543_RS12270	PF02594	Uncharacterised ACR, YggU family COG1872
AL543_RS12275	PF02325	AL543_RS12275
AL543_RS12280	PF03807	NADP oxidoreductase coenzyme F420-dependent
AL543_RS12280	PF14748	Pyrroline-5-carboxylate reductase dimerisation
AL543_RS12285	PF01168	Alanine racemase, N-terminal domain
AL543_RS12290	PF00437	Type II/IV secretion system protein
AL543_RS12295	PF00437	Type II/IV secretion system protein
AL543_RS12300	PF00196	Bacterial regulatory proteins, luxR family
AL543_RS12305	PF00579	tRNA synthetases class I (W and Y)
AL543_RS12305	PF01479	S4 domain
AL543_RS12310	PF03652	Uncharacterised protein family (UPF0081)
AL543_RS12315	PF02622	Uncharacterized ACR, COG1678
AL543_RS12320	PF02951	Prokaryotic glutathione synthetase, N-terminal domain
AL543_RS12320	PF02955	Prokaryotic glutathione synthetase, ATP-grasp domain
AL543_RS12325	PF04452	RNA methyltransferase
AL543_RS12330	PF04231	Endonuclease I
AL543_RS12335	PF10263	AL543_RS12335
AL543_RS12335	PF17283	AL543_RS12335
AL543_RS12340	PF00438	S-adenosylmethionine synthetase, N-terminal domain
AL543_RS12340	PF02772	S-adenosylmethionine synthetase, central domain
AL543_RS12340	PF02773	S-adenosylmethionine synthetase, C-terminal domain
AL543_RS12350	PF00456	Transketolase, thiamine diphosphate binding domain
AL543_RS12350	PF02779	Transketolase, pyrimidine binding domain
AL543_RS12350	PF02780	Transketolase, C-terminal domain
AL543_RS12355	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS12355	PF03466	LysR substrate binding domain
AL543_RS12360	PF00593	TonB dependent receptor
AL543_RS12360	PF07715	TonB-dependent Receptor Plug Domain
AL543_RS12365	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AL543_RS12365	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
AL543_RS12370	PF00162	Phosphoglycerate kinase
AL543_RS12375	PF01116	Fructose-bisphosphate aldolase class-II
AL543_RS12380	PF00924	Mechanosensitive ion channel
AL543_RS12380	PF05552	Conserved TM helix
AL543_RS12385	PF01797	Transposase IS200 like
AL543_RS12390	PF01810	AL543_RS12390
AL543_RS12395	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS12395	PF03466	LysR substrate binding domain
AL543_RS12400	PF04402	Protein of unknown function (DUF541)
AL543_RS12405	PF00224	Pyruvate kinase, barrel domain
AL543_RS12405	PF02887	Pyruvate kinase, alpha/beta domain
AL543_RS12410	PF00455	AL543_RS12410
AL543_RS12410	PF08220	DeoR-like helix-turn-helix domain
AL543_RS12415	PF01380	SIS domain
AL543_RS12415	PF13522	Glutamine amidotransferase domain
AL543_RS12420	PF03480	Bacterial extracellular solute-binding protein, family 7
AL543_RS12425	PF01553	Acyltransferase
AL543_RS12425	PF13444	Acetyltransferase (GNAT) domain
AL543_RS12435	PF00140	Sigma-70 factor, region 1
AL543_RS12435	PF03979	Sigma-70 factor, region 1
AL543_RS12435	PF04539	Sigma-70 region 3
AL543_RS12435	PF04542	Sigma-70 region 2
AL543_RS12435	PF04545	Sigma-70, region 4
AL543_RS12435	PF04546	Sigma-70, non-essential region
AL543_RS12440	PF01807	CHC2 zinc finger
AL543_RS12440	PF08275	DNA primase catalytic core, N-terminal domain
AL543_RS12440	PF08278	DNA primase DnaG DnaB-binding
AL543_RS12440	PF10410	DnaB-helicase binding domain of primase
AL543_RS12440	PF13155	Toprim-like
AL543_RS12445	PF09424	Yqey-like protein
AL543_RS12450	PF01165	Ribosomal protein S21
AL543_RS12455	PF00814	Glycoprotease family
AL543_RS12460	PF12697	Alpha/beta hydrolase family
AL543_RS12465	PF02660	AL543_RS12465
AL543_RS12475	PF02152	Dihydroneopterin aldolase
AL543_RS12480	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
AL543_RS12485	PF02673	AL543_RS12485
AL543_RS12490	PF04977	Septum formation initiator
AL543_RS12495	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
AL543_RS12500	PF02542	YgbB family
AL543_RS12505	PF01142	tRNA pseudouridine synthase D (TruD)
AL543_RS12510	PF01975	Survival protein SurE
AL543_RS12515	PF01135	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
AL543_RS12520	PF01476	LysM domain
AL543_RS12520	PF01551	Peptidase family M23
AL543_RS12525	PF00140	Sigma-70 factor, region 1
AL543_RS12525	PF04539	Sigma-70 region 3
AL543_RS12525	PF04542	Sigma-70 region 2
AL543_RS12525	PF04545	Sigma-70, region 4
AL543_RS12530	PF00488	MutS domain V
AL543_RS12530	PF01624	MutS domain I
AL543_RS12530	PF05188	MutS domain II
AL543_RS12530	PF05190	MutS family domain IV
AL543_RS12530	PF05192	MutS domain III
AL543_RS12535	PF00291	Pyridoxal-phosphate dependent enzyme
AL543_RS12540	PF13531	Bacterial extracellular solute-binding protein
AL543_RS12545	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS12550	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS12555	PF00005	ABC transporter
AL543_RS12555	PF12857	AL543_RS12555
AL543_RS12560	PF02464	Competence-damaged protein
AL543_RS12565	PF00154	recA bacterial DNA recombination protein
AL543_RS12570	PF02631	RecX family
AL543_RS12575	PF01411	tRNA synthetases class II (A)
AL543_RS12575	PF02272	DHHA1 domain
AL543_RS12575	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
AL543_RS12580	PF00696	Amino acid kinase family
AL543_RS12585	PF02599	Global regulator protein family
AL543_RS12630	PF04277	AL543_RS12630
AL543_RS12635	PF00364	Biotin-requiring enzyme
AL543_RS12635	PF00682	HMGL-like
AL543_RS12635	PF02436	Conserved carboxylase domain
AL543_RS12640	PF03977	AL543_RS12640
AL543_RS12645	PF08240	Alcohol dehydrogenase GroES-like domain
AL543_RS12645	PF13602	Zinc-binding dehydrogenase
AL543_RS12650	PF09335	AL543_RS12650
AL543_RS12655	PF00675	Insulinase (Peptidase family M16)
AL543_RS12655	PF05193	Peptidase M16 inactive domain
AL543_RS12660	PF04262	Glutamate-cysteine ligase
AL543_RS12665	PF02664	S-Ribosylhomocysteinase (LuxS)
AL543_RS12670	PF00571	CBS domain
AL543_RS12670	PF01595	AL543_RS12670
AL543_RS12670	PF03471	Transporter associated domain
AL543_RS12675	PF01578	AL543_RS12675
AL543_RS12680	PF00448	SRP54-type protein, GTPase domain
AL543_RS12680	PF02881	SRP54-type protein, helical bundle domain
AL543_RS12680	PF02978	Signal peptide binding domain
AL543_RS12685	PF00886	Ribosomal protein S16
AL543_RS12690	PF01782	RimM N-terminal domain
AL543_RS12690	PF05239	PRC-barrel domain
AL543_RS12695	PF01746	tRNA (Guanine-1)-methyltransferase
AL543_RS12700	PF01245	Ribosomal protein L19
AL543_RS12705	PF13180	PDZ domain
AL543_RS12705	PF13365	Trypsin-like peptidase domain
AL543_RS12710	PF00595	PDZ domain (Also known as DHR or GLGF)
AL543_RS12710	PF13180	PDZ domain
AL543_RS12710	PF13365	Trypsin-like peptidase domain
AL543_RS12715	PF06295	AL543_RS12715
AL543_RS12720	PF03969	AFG1-like ATPase
AL543_RS12730	PF00572	Ribosomal protein L13
AL543_RS12735	PF00380	Ribosomal protein S9/S16
AL543_RS12740	PF00355	Rieske [2Fe-2S] domain
AL543_RS12740	PF10399	Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal
AL543_RS12745	PF00032	Cytochrome b(C-terminal)/b6/petD
AL543_RS12745	PF00033	Cytochrome b(N-terminal)/b6/petB
AL543_RS12750	PF02167	Cytochrome C1 family
AL543_RS12755	PF00043	Glutathione S-transferase, C-terminal domain
AL543_RS12755	PF13417	Glutathione S-transferase, N-terminal domain
AL543_RS12760	PF04386	Stringent starvation protein B
AL543_RS12765	PF04972	BON domain
AL543_RS12770	PF13580	SIS domain
AL543_RS12775	PF02021	Uncharacterised protein family UPF0102
AL543_RS12780	PF04348	LppC putative lipoprotein
AL543_RS12785	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
AL543_RS12790	PF00440	Bacterial regulatory proteins, tetR family
AL543_RS12795	PF00156	Phosphoribosyl transferase domain
AL543_RS12800	PF00484	Carbonic anhydrase
AL543_RS12805	PF00916	AL543_RS12805
AL543_RS12805	PF01740	STAS domain
AL543_RS12810	PF00005	ABC transporter
AL543_RS12815	PF01061	AL543_RS12815
AL543_RS12820	PF02569	Pantoate-beta-alanine ligase
AL543_RS12825	PF02548	Ketopantoate hydroxymethyltransferase
AL543_RS12830	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
AL543_RS12835	PF01743	Poly A polymerase head domain
AL543_RS12835	PF12626	Polymerase A arginine-rich C-terminus
AL543_RS12835	PF12627	Probable RNA and SrmB- binding site of polymerase A
AL543_RS12840	PF00749	tRNA synthetases class I (E and Q), catalytic domain
AL543_RS12845	PF01258	Prokaryotic dksA/traR C4-type zinc finger
AL543_RS12850	PF03749	Sugar fermentation stimulation protein
AL543_RS12855	PF00270	DEAD/DEAH box helicase
AL543_RS12855	PF00271	Helicase conserved C-terminal domain
AL543_RS12855	PF04408	Helicase associated domain (HA2)
AL543_RS12855	PF08482	AL543_RS12855
AL543_RS12860	PF00905	Penicillin binding protein transpeptidase domain
AL543_RS12860	PF00912	Transglycosylase
AL543_RS12860	PF14814	Bifunctional transglycosylase second domain
AL543_RS12865	PF01734	Patatin-like phospholipase
AL543_RS12865	PF07244	Surface antigen variable number repeat
AL543_RS12870	PF00330	Aconitase family (aconitate hydratase)
AL543_RS12870	PF06434	Aconitate hydratase 2 N-terminus
AL543_RS12870	PF11791	Aconitate B N-terminal domain
AL543_RS12875	PF06062	AL543_RS12875
AL543_RS12880	PF00543	Nitrogen regulatory protein P-II
AL543_RS12885	PF00909	Ammonium Transporter Family
AL543_RS12890	PF13343	Bacterial extracellular solute-binding protein
AL543_RS12895	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS12900	PF00005	ABC transporter
AL543_RS12900	PF08402	TOBE domain
AL543_RS12905	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
AL543_RS12905	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
AL543_RS12905	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
AL543_RS12905	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
AL543_RS12915	PF06165	Glycosyltransferase family 36
AL543_RS12915	PF17167	AL543_RS12915
AL543_RS12920	PF00728	Glycosyl hydrolase family 20, catalytic domain
AL543_RS12920	PF02838	Glycosyl hydrolase family 20, domain 2
AL543_RS12925	PF01869	BadF/BadG/BcrA/BcrD ATPase family
AL543_RS12930	PF00759	Glycosyl hydrolase family 9
AL543_RS12930	PF02927	N-terminal ig-like domain of cellulase
AL543_RS12935	PF00005	ABC transporter
AL543_RS12935	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL543_RS12940	PF00005	ABC transporter
AL543_RS12940	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL543_RS12945	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS12945	PF12911	AL543_RS12945
AL543_RS12950	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS12955	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL543_RS12960	PF00072	Response regulator receiver domain
AL543_RS12960	PF00512	His Kinase A (phospho-acceptor) domain
AL543_RS12960	PF00672	HAMP domain
AL543_RS12960	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS12960	PF13188	PAS domain
AL543_RS12965	PF05175	Methyltransferase small domain
AL543_RS12965	PF08468	Methyltransferase small domain N-terminal
AL543_RS12970	PF01594	AL543_RS12970
AL543_RS12975	PF00202	Aminotransferase class-III
AL543_RS12980	PF01521	Iron-sulphur cluster biosynthesis
AL543_RS12985	PF16576	AL543_RS12985
AL543_RS12990	PF00873	AcrB/AcrD/AcrF family
AL543_RS12995	PF01551	Peptidase family M23
AL543_RS12995	PF08525	AL543_RS12995
AL543_RS13000	PF00579	tRNA synthetases class I (W and Y)
AL543_RS13005	PF02113	D-Ala-D-Ala carboxypeptidase 3 (S13) family
AL543_RS13010	PF13609	Gram-negative porin
AL543_RS13015	PF01272	Transcription elongation factor, GreA/GreB, C-term
AL543_RS13015	PF03449	Transcription elongation factor, N-terminal
AL543_RS13020	PF01985	CRS1 / YhbY (CRM) domain
AL543_RS13025	PF01728	FtsJ-like methyltransferase
AL543_RS13030	PF00004	ATPase family associated with various cellular activities (AAA)
AL543_RS13030	PF01434	Peptidase family M41
AL543_RS13030	PF06480	FtsH Extracellular
AL543_RS13035	PF00809	Pterin binding enzyme
AL543_RS13040	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
AL543_RS13040	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
AL543_RS13040	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
AL543_RS13040	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
AL543_RS13050	PF03840	Preprotein translocase SecG subunit
AL543_RS13065	PF02576	Uncharacterised BCR, YhbC family COG0779
AL543_RS13065	PF17384	AL543_RS13065
AL543_RS13070	PF08529	NusA N-terminal domain
AL543_RS13070	PF13184	NusA-like KH domain
AL543_RS13070	PF14520	Helix-hairpin-helix domain
AL543_RS13075	PF00009	Elongation factor Tu GTP binding domain
AL543_RS13075	PF04760	Translation initiation factor IF-2, N-terminal region
AL543_RS13075	PF08364	AL543_RS13075
AL543_RS13075	PF11987	Translation-initiation factor 2
AL543_RS13080	PF02033	Ribosome-binding factor A
AL543_RS13085	PF01509	TruB family pseudouridylate synthase (N terminal domain)
AL543_RS13085	PF09157	Pseudouridine synthase II TruB, C-terminal
AL543_RS13085	PF16198	AL543_RS13085
AL543_RS13090	PF00312	Ribosomal protein S15
AL543_RS13095	PF00013	KH domain
AL543_RS13095	PF00575	S1 RNA binding domain
AL543_RS13095	PF01138	3' exoribonuclease family, domain 1
AL543_RS13095	PF03725	3' exoribonuclease family, domain 2
AL543_RS13095	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
AL543_RS13105	PF01047	MarR family
AL543_RS13110	PF01554	MatE
AL543_RS13115	PF01136	AL543_RS13115
AL543_RS13120	PF01136	AL543_RS13120
AL543_RS13125	PF00563	EAL domain
AL543_RS13125	PF00990	GGDEF domain
AL543_RS13125	PF08448	PAS fold
AL543_RS13125	PF13188	PAS domain
AL543_RS13130	PF02036	SCP-2 sterol transfer family
AL543_RS13135	PF13527	Acetyltransferase (GNAT) domain
AL543_RS13140	PF03603	DNA polymerase III psi subunit
AL543_RS13145	PF00583	Acetyltransferase (GNAT) family
AL543_RS13150	PF00563	EAL domain
AL543_RS13150	PF00990	GGDEF domain
AL543_RS13155	PF00009	Elongation factor Tu GTP binding domain
AL543_RS13155	PF03144	Elongation factor Tu domain 2
AL543_RS13155	PF16658	AL543_RS13155
AL543_RS13160	PF00270	DEAD/DEAH box helicase
AL543_RS13160	PF00271	Helicase conserved C-terminal domain
AL543_RS13165	PF05175	Methyltransferase small domain
AL543_RS13170	PF05525	AL543_RS13170
AL543_RS13180	PF00152	tRNA synthetases class II (D, K and N)
AL543_RS13180	PF01336	OB-fold nucleic acid binding domain
AL543_RS13185	PF00158	Sigma-54 interaction domain
AL543_RS13185	PF02954	Bacterial regulatory protein, Fis family
AL543_RS13200	PF00248	Aldo/keto reductase family
AL543_RS13205	PF02976	DNA mismatch repair enzyme MutH
AL543_RS13210	PF00293	NUDIX domain
AL543_RS13215	PF00391	PEP-utilising enzyme, mobile domain
AL543_RS13215	PF01590	GAF domain
AL543_RS13215	PF02896	PEP-utilising enzyme, TIM barrel domain
AL543_RS13215	PF05524	PEP-utilising enzyme, N-terminal
AL543_RS13220	PF01925	AL543_RS13220
AL543_RS13225	PF01790	AL543_RS13225
AL543_RS13230	PF00303	Thymidylate synthase
AL543_RS13235	PF02690	AL543_RS13235
AL543_RS13240	PF13358	DDE superfamily endonuclease
AL543_RS13240	PF13384	Homeodomain-like domain
AL543_RS13240	PF13592	AL543_RS13240
AL543_RS13245	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS13245	PF03466	LysR substrate binding domain
AL543_RS13250	PF01022	Bacterial regulatory protein, arsR family
AL543_RS13255	PF01649	Ribosomal protein S20
AL543_RS13260	PF03023	AL543_RS13260
AL543_RS13265	PF01687	Riboflavin kinase
AL543_RS13265	PF06574	FAD synthetase
AL543_RS13270	PF00133	tRNA synthetases class I (I, L, M and V)
AL543_RS13270	PF06827	Zinc finger found in FPG and IleRS
AL543_RS13270	PF08264	Anticodon-binding domain of tRNA
AL543_RS13275	PF01252	AL543_RS13275
AL543_RS13280	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AL543_RS13285	PF02401	LytB protein
AL543_RS13290	PF02554	AL543_RS13290
AL543_RS13290	PF13722	AL543_RS13290
AL543_RS13295	PF10973	AL543_RS13295
AL543_RS13300	PF00999	Sodium/hydrogen exchanger family
AL543_RS13300	PF02254	TrkA-N domain
AL543_RS13305	PF13580	SIS domain
AL543_RS13310	PF03702	Uncharacterised protein family (UPF0075)
AL543_RS13315	PF00933	Glycosyl hydrolase family 3 N terminal domain
AL543_RS13320	PF00072	Response regulator receiver domain
AL543_RS13320	PF04397	LytTr DNA-binding domain
AL543_RS13325	PF06580	AL543_RS13325
AL543_RS13325	PF07694	5TMR of 5TMR-LYT
AL543_RS13325	PF13492	GAF domain
AL543_RS13330	PF00793	DAHP synthetase I family
AL543_RS13335	PF01817	Chorismate mutase type II
AL543_RS13335	PF02153	Prephenate dehydrogenase
AL543_RS13340	PF07238	PilZ domain
AL543_RS13345	PF00005	ABC transporter
AL543_RS13345	PF12848	ABC transporter
AL543_RS13350	PF01464	Transglycosylase SLT domain
AL543_RS13350	PF14718	Soluble lytic murein transglycosylase L domain
AL543_RS13355	PF01371	Trp repressor protein
AL543_RS13360	PF01931	Protein of unknown function DUF84
AL543_RS13365	PF00563	EAL domain
AL543_RS13365	PF00990	GGDEF domain
AL543_RS13370	PF13416	Bacterial extracellular solute-binding protein
AL543_RS13375	PF00800	Prephenate dehydratase
AL543_RS13375	PF01817	Chorismate mutase type II
AL543_RS13380	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
AL543_RS13385	PF01797	Transposase IS200 like
AL543_RS13390	PF13525	Outer membrane lipoprotein
AL543_RS13395	PF00849	RNA pseudouridylate synthase
AL543_RS13395	PF01479	S4 domain
AL543_RS13400	PF02578	Multi-copper polyphenol oxidoreductase laccase
AL543_RS13405	PF00004	ATPase family associated with various cellular activities (AAA)
AL543_RS13405	PF02861	Clp amino terminal domain
AL543_RS13405	PF07724	AAA domain (Cdc48 subfamily)
AL543_RS13405	PF10431	C-terminal, D2-small domain, of ClpB protein
AL543_RS13480	PF03929	AL543_RS13480
AL543_RS13485	PF11804	AL543_RS13485
AL543_RS13490	PF00593	TonB dependent receptor
AL543_RS13490	PF07715	TonB-dependent Receptor Plug Domain
AL543_RS13500	PF13580	SIS domain
AL543_RS13515	PF00072	Response regulator receiver domain
AL543_RS13515	PF00486	Transcriptional regulatory protein, C terminal
AL543_RS13525	PF01738	Dienelactone hydrolase family
AL543_RS13530	PF08921	Domain of unknown function (DUF1904)
AL543_RS13545	PF00881	Nitroreductase family
AL543_RS13550	PF12838	4Fe-4S dicluster domain
AL543_RS13555	PF01136	AL543_RS13555
AL543_RS13555	PF16325	AL543_RS13555
AL543_RS13560	PF04381	Putative exonuclease, RdgC
AL543_RS13565	PF00072	Response regulator receiver domain
AL543_RS13565	PF00486	Transcriptional regulatory protein, C terminal
AL543_RS13570	PF00512	His Kinase A (phospho-acceptor) domain
AL543_RS13570	PF00989	PAS fold
AL543_RS13570	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS13570	PF11808	AL543_RS13570
AL543_RS13575	PF12849	PBP superfamily domain
AL543_RS13580	PF02541	Ppx/GppA phosphatase family
AL543_RS13585	PF02503	Polyphosphate kinase middle domain
AL543_RS13585	PF13089	Polyphosphate kinase N-terminal domain
AL543_RS13585	PF13090	Polyphosphate kinase C-terminal domain
AL543_RS13590	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS13595	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS13600	PF00005	ABC transporter
AL543_RS13605	PF01895	PhoU domain
AL543_RS13610	PF03976	Polyphosphate kinase 2 (PPK2)
AL543_RS13615	PF03932	CutC family
AL543_RS13620	PF00578	AhpC/TSA family
AL543_RS13620	PF10417	C-terminal domain of 1-Cys peroxiredoxin
AL543_RS13625	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS13625	PF03466	LysR substrate binding domain
AL543_RS13630	PF01274	Malate synthase
AL543_RS13635	PF00463	Isocitrate lyase family
AL543_RS13640	PF00571	CBS domain
AL543_RS13645	PF02547	Queuosine biosynthesis protein
AL543_RS13655	PF01702	Queuine tRNA-ribosyltransferase
AL543_RS13660	PF02699	Preprotein translocase subunit
AL543_RS13665	PF02355	Protein export membrane protein
AL543_RS13665	PF07549	SecD/SecF GG Motif
AL543_RS13665	PF13721	SecD export protein N-terminal TM region
AL543_RS13670	PF02355	Protein export membrane protein
AL543_RS13670	PF07549	SecD/SecF GG Motif
AL543_RS13675	PF00459	Inositol monophosphatase family
AL543_RS13680	PF00588	SpoU rRNA Methylase family
AL543_RS13685	PF02082	Transcriptional regulator
AL543_RS13690	PF00266	Aminotransferase class-V
AL543_RS13695	PF01592	NifU-like N terminal domain
AL543_RS13700	PF01521	Iron-sulphur cluster biosynthesis
AL543_RS13705	PF00226	DnaJ domain
AL543_RS13705	PF07743	HSCB C-terminal oligomerisation domain
AL543_RS13710	PF00012	Hsp70 protein
AL543_RS13715	PF00111	2Fe-2S iron-sulfur cluster binding domain
AL543_RS13720	PF04384	Iron-sulphur cluster assembly
AL543_RS13725	PF00883	Cytosol aminopeptidase family, catalytic domain
AL543_RS13725	PF12404	AL543_RS13725
AL543_RS13730	PF00334	Nucleoside diphosphate kinase
AL543_RS13735	PF04055	Radical SAM superfamily
AL543_RS13740	PF13413	Helix-turn-helix domain
AL543_RS13740	PF13464	AL543_RS13740
AL543_RS13745	PF04551	GcpE protein
AL543_RS13750	PF03129	Anticodon binding domain
AL543_RS13750	PF13393	Histidyl-tRNA synthetase
AL543_RS13755	PF09976	Tetratricopeptide repeat
AL543_RS13760	PF13360	PQQ-like domain
AL543_RS13765	PF01926	50S ribosome-binding GTPase
AL543_RS13765	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
AL543_RS13775	PF07191	zinc-ribbons
AL543_RS13780	PF02601	AL543_RS13780
AL543_RS13780	PF13742	AL543_RS13780
AL543_RS13785	PF00478	IMP dehydrogenase / GMP reductase domain
AL543_RS13785	PF00571	CBS domain
AL543_RS13790	PF00117	Glutamine amidotransferase class-I
AL543_RS13790	PF00958	GMP synthase C terminal domain
AL543_RS13790	PF02540	NAD synthase
AL543_RS13795	PF00589	Phage integrase family
AL543_RS13795	PF13356	Domain of unknown function (DUF4102)
AL543_RS13800	PF13304	AAA domain
AL543_RS13805	PF13245	Part of AAA domain
AL543_RS13805	PF13361	UvrD-like helicase C-terminal domain
AL543_RS13815	PF05930	Prophage CP4-57 regulatory protein (AlpA)
AL543_RS13820	PF13481	AAA domain
AL543_RS13840	PF04610	AL543_RS13840
AL543_RS13870	PF13358	DDE superfamily endonuclease
AL543_RS13870	PF13551	Winged helix-turn helix
AL543_RS13870	PF13592	AL543_RS13870
AL543_RS13885	PF02661	Fic/DOC family
AL543_RS13890	PF01609	Transposase DDE domain
AL543_RS13905	PF00589	Phage integrase family
AL543_RS13910	PF00182	Chitinase class I
AL543_RS13910	PF02839	Carbohydrate binding domain
AL543_RS13915	PF01184	AL543_RS13915
AL543_RS13920	PF01797	Transposase IS200 like
AL543_RS13925	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS13925	PF03466	LysR substrate binding domain
AL543_RS13935	PF01235	AL543_RS13935
AL543_RS13940	PF01266	FAD dependent oxidoreductase
AL543_RS13945	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS13945	PF03466	LysR substrate binding domain
AL543_RS13950	PF00805	Pentapeptide repeats (8 copies)
AL543_RS13950	PF07885	Ion channel
AL543_RS13955	PF08883	Dopa 4,5-dioxygenase family
AL543_RS13960	PF00563	EAL domain
AL543_RS13960	PF12792	AL543_RS13960
AL543_RS13970	PF00072	Response regulator receiver domain
AL543_RS13970	PF12431	AL543_RS13970
AL543_RS13975	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS13975	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
AL543_RS13975	PF17203	AL543_RS13975
AL543_RS13980	PF03977	AL543_RS13980
AL543_RS13985	PF00364	Biotin-requiring enzyme
AL543_RS13985	PF00682	HMGL-like
AL543_RS13985	PF02436	Conserved carboxylase domain
AL543_RS13990	PF04277	AL543_RS13990
AL543_RS13995	PF03390	AL543_RS13995
AL543_RS14000	PF08218	Citrate lyase ligase C-terminal domain
AL543_RS14000	PF13673	Acetyltransferase (GNAT) domain
AL543_RS14005	PF06857	AL543_RS14005
AL543_RS14010	PF03328	HpcH/HpaI aldolase/citrate lyase family
AL543_RS14015	PF04223	Citrate lyase, alpha subunit (CitF)
AL543_RS14020	PF03802	AL543_RS14020
AL543_RS14025	PF01874	ATP:dephospho-CoA triphosphoribosyl transferase
AL543_RS14030	PF10000	ACT domain
AL543_RS14030	PF13840	ACT domain
AL543_RS14035	PF00588	SpoU rRNA Methylase family
AL543_RS14040	PF11953	Domain of unknown function (DUF3470)
AL543_RS14040	PF13187	4Fe-4S dicluster domain
AL543_RS14045	PF01593	Flavin containing amine oxidoreductase
AL543_RS14055	PF04927	AL543_RS14055
AL543_RS14065	PF13358	DDE superfamily endonuclease
AL543_RS14065	PF13384	Homeodomain-like domain
AL543_RS14065	PF13592	AL543_RS14065
AL543_RS14075	PF01609	Transposase DDE domain
AL543_RS14085	PF13358	DDE superfamily endonuclease
AL543_RS14085	PF13384	Homeodomain-like domain
AL543_RS14085	PF13592	AL543_RS14085
AL543_RS14095	PF00176	SNF2 family N-terminal domain
AL543_RS14095	PF00271	Helicase conserved C-terminal domain
AL543_RS14105	PF08665	AL543_RS14105
AL543_RS14125	PF00589	Phage integrase family
AL543_RS14125	PF13356	Domain of unknown function (DUF4102)
AL543_RS14135	PF01668	SmpB protein
AL543_RS14140	PF03364	Polyketide cyclase / dehydrase and lipid transport
AL543_RS14145	PF03658	RnfH family Ubiquitin
AL543_RS14150	PF04355	SmpA / OmlA family
AL543_RS14155	PF02463	RecF/RecN/SMC N terminal domain
AL543_RS14160	PF01513	ATP-NAD kinase
AL543_RS14165	PF01025	GrpE
AL543_RS14170	PF00012	Hsp70 protein
AL543_RS14175	PF00226	DnaJ domain
AL543_RS14175	PF00684	DnaJ central domain
AL543_RS14175	PF01556	DnaJ C terminal domain
AL543_RS14180	PF07963	Prokaryotic N-terminal methylation motif
AL543_RS14180	PF16732	AL543_RS14180
AL543_RS14185	PF07963	Prokaryotic N-terminal methylation motif
AL543_RS14185	PF12019	Type II transport protein GspH
AL543_RS14190	PF07963	Prokaryotic N-terminal methylation motif
AL543_RS14200	PF07963	Prokaryotic N-terminal methylation motif
AL543_RS14205	PF03806	AL543_RS14205
AL543_RS14210	PF14437	AL543_RS14210
AL543_RS14215	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL543_RS14215	PF01464	Transglycosylase SLT domain
AL543_RS14225	PF02769	AIR synthase related protein, C-terminal domain
AL543_RS14225	PF13507	CobB/CobQ-like glutamine amidotransferase domain
AL543_RS14230	PF14056	AL543_RS14230
AL543_RS14235	PF06786	AL543_RS14235
AL543_RS14240	PF04391	AL543_RS14240
AL543_RS14245	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
AL543_RS14245	PF03129	Anticodon binding domain
AL543_RS14245	PF04073	Aminoacyl-tRNA editing domain
AL543_RS14255	PF01980	Uncharacterised protein family UPF0066
AL543_RS14260	PF01197	Ribosomal protein L31
AL543_RS14265	PF00444	Ribosomal protein L36
AL543_RS14270	PF03806	AL543_RS14270
AL543_RS14275	PF02639	AL543_RS14275
AL543_RS14285	PF13302	Acetyltransferase (GNAT) domain
AL543_RS14290	PF11743	AL543_RS14290
AL543_RS14295	PF12069	AL543_RS14295
AL543_RS14300	PF04287	tRNA pseudouridine synthase C
AL543_RS14305	PF00849	RNA pseudouridylate synthase
AL543_RS14310	PF02779	Transketolase, pyrimidine binding domain
AL543_RS14310	PF02780	Transketolase, C-terminal domain
AL543_RS14310	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
AL543_RS14315	PF00348	Polyprenyl synthetase
AL543_RS14320	PF02609	Exonuclease VII small subunit
AL543_RS14325	PF01618	AL543_RS14325
AL543_RS14330	PF00691	OmpA family
AL543_RS14330	PF13677	AL543_RS14330
AL543_RS14335	PF02568	Thiamine biosynthesis protein (ThiI)
AL543_RS14335	PF02926	THUMP domain
AL543_RS14340	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS14340	PF03466	LysR substrate binding domain
AL543_RS14345	PF04241	AL543_RS14345
AL543_RS14350	PF01367	5'-3' exonuclease, C-terminal SAM fold
AL543_RS14350	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
AL543_RS14355	PF03641	Possible lysine decarboxylase
AL543_RS14355	PF11892	Domain of unknown function (DUF3412)
AL543_RS14355	PF14793	Domain of unknown function (DUF4478)
AL543_RS14360	PF00990	GGDEF domain
AL543_RS14370	PF14489	QueF-like protein
AL543_RS14370	PF14819	Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term
AL543_RS14375	PF07348	Syd protein (SUKH-2)
AL543_RS14380	PF10071	AL543_RS14380
AL543_RS14385	PF03180	NLPA lipoprotein
AL543_RS14390	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS14395	PF00005	ABC transporter
AL543_RS14395	PF09383	NIL domain
AL543_RS14400	PF13242	HAD-hyrolase-like
AL543_RS14405	PF00356	Bacterial regulatory proteins, lacI family
AL543_RS14405	PF13377	Periplasmic binding protein-like domain
AL543_RS14410	PF00367	phosphotransferase system, EIIB
AL543_RS14410	PF02378	Phosphotransferase system, EIIC
AL543_RS14415	PF00128	Alpha amylase, catalytic domain
AL543_RS14420	PF00072	Response regulator receiver domain
AL543_RS14420	PF00486	Transcriptional regulatory protein, C terminal
AL543_RS14425	PF00512	His Kinase A (phospho-acceptor) domain
AL543_RS14425	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS14430	PF11059	AL543_RS14430
AL543_RS14455	PF16576	AL543_RS14455
AL543_RS14460	PF00873	AcrB/AcrD/AcrF family
AL543_RS14470	PF01609	Transposase DDE domain
AL543_RS14475	PF01451	Low molecular weight phosphotyrosine protein phosphatase
AL543_RS14480	PF02350	UDP-N-acetylglucosamine 2-epimerase
AL543_RS14485	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
AL543_RS14485	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
AL543_RS14485	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
AL543_RS14495	PF00534	Glycosyl transferases group 1
AL543_RS14495	PF13439	Glycosyltransferase Family 4
AL543_RS14500	PF13440	AL543_RS14500
AL543_RS14500	PF14667	Polysaccharide biosynthesis C-terminal domain
AL543_RS14510	PF00132	Bacterial transferase hexapeptide (six repeats)
AL543_RS14515	PF00501	AMP-binding enzyme
AL543_RS14520	PF00534	Glycosyl transferases group 1
AL543_RS14530	PF03808	AL543_RS14530
AL543_RS14540	PF12708	Pectate lyase superfamily protein
AL543_RS14540	PF13229	Right handed beta helix region
AL543_RS14545	PF16458	AL543_RS14545
AL543_RS14550	PF04932	AL543_RS14550
AL543_RS14560	PF02397	AL543_RS14560
AL543_RS14560	PF13727	CoA-binding domain
AL543_RS14565	PF10082	AL543_RS14565
AL543_RS14570	PF02563	Polysaccharide biosynthesis/export protein
AL543_RS14570	PF10531	SLBB domain
AL543_RS14575	PF02706	Chain length determinant protein
AL543_RS14575	PF13614	AAA domain
AL543_RS14575	PF13807	AL543_RS14575
AL543_RS14590	PF02588	AL543_RS14590
AL543_RS14595	PF00464	Serine hydroxymethyltransferase
AL543_RS14605	PF04055	Radical SAM superfamily
AL543_RS14605	PF16881	AL543_RS14605
AL543_RS14610	PF03099	Biotin/lipoate A/B protein ligase family
AL543_RS14615	PF04359	Protein of unknown function (DUF493)
AL543_RS14620	PF00768	D-alanyl-D-alanine carboxypeptidase
AL543_RS14620	PF07943	Penicillin-binding protein 5, C-terminal domain
AL543_RS14625	PF03330	Rare lipoprotein A (RlpA)-like double-psi beta-barrel
AL543_RS14625	PF05036	Sporulation related domain
AL543_RS14630	PF01098	AL543_RS14630
AL543_RS14635	PF00905	Penicillin binding protein transpeptidase domain
AL543_RS14635	PF03717	Penicillin-binding Protein dimerisation domain
AL543_RS14640	PF02590	Predicted SPOUT methyltransferase
AL543_RS14645	PF02410	Oligomerisation domain
AL543_RS14650	PF06144	DNA polymerase III, delta subunit
AL543_RS14650	PF14840	Processivity clamp loader gamma complex DNA pol III C-term
AL543_RS14655	PF04390	Lipopolysaccharide-assembly
AL543_RS14660	PF00133	tRNA synthetases class I (I, L, M and V)
AL543_RS14660	PF08264	Anticodon-binding domain of tRNA
AL543_RS14660	PF13603	Leucyl-tRNA synthetase, Domain 2
AL543_RS14665	PF07295	AL543_RS14665
AL543_RS14670	PF00795	Carbon-nitrogen hydrolase
AL543_RS14675	PF00571	CBS domain
AL543_RS14675	PF03471	Transporter associated domain
AL543_RS14680	PF02130	Uncharacterized protein family UPF0054
AL543_RS14685	PF02562	PhoH-like protein
AL543_RS14690	PF00919	Uncharacterized protein family UPF0004
AL543_RS14690	PF01938	TRAM domain
AL543_RS14690	PF04055	Radical SAM superfamily
AL543_RS14695	PF01494	FAD binding domain
AL543_RS14700	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
AL543_RS14705	PF00391	PEP-utilising enzyme, mobile domain
AL543_RS14705	PF02896	PEP-utilising enzyme, TIM barrel domain
AL543_RS14705	PF05524	PEP-utilising enzyme, N-terminal
AL543_RS14710	PF00381	PTS HPr component phosphorylation site
AL543_RS14715	PF00291	Pyridoxal-phosphate dependent enzyme
AL543_RS14720	PF07264	Etoposide-induced protein 2
AL543_RS14725	PF04354	ZipA, C-terminal FtsZ-binding domain
AL543_RS14730	PF00533	BRCA1 C Terminus (BRCT) domain
AL543_RS14730	PF01653	NAD-dependent DNA ligase adenylation domain
AL543_RS14730	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
AL543_RS14730	PF03120	NAD-dependent DNA ligase OB-fold domain
AL543_RS14730	PF12826	Helix-hairpin-helix motif
AL543_RS14730	PF14520	Helix-hairpin-helix domain
AL543_RS14735	PF13609	Gram-negative porin
AL543_RS14740	PF09829	AL543_RS14740
AL543_RS14745	PF00376	MerR family regulatory protein
AL543_RS14745	PF09278	MerR, DNA binding
AL543_RS14750	PF01609	Transposase DDE domain
AL543_RS14750	PF13006	AL543_RS14750
AL543_RS14755	PF01957	NfeD-like C-terminal, partner-binding
AL543_RS14760	PF01145	SPFH domain / Band 7 family
AL543_RS14760	PF16200	AL543_RS14760
AL543_RS14765	PF00085	Thioredoxin
AL543_RS14765	PF14559	Tetratricopeptide repeat
AL543_RS14765	PF14561	Tetratricopeptide repeat
AL543_RS14775	PF00106	short chain dehydrogenase
AL543_RS14780	PF01370	NAD dependent epimerase/dehydratase family
AL543_RS14780	PF08338	Domain of unknown function (DUF1731)
AL543_RS14785	PF12850	Calcineurin-like phosphoesterase superfamily domain
AL543_RS14790	PF10262	Rdx family
AL543_RS14795	PF17323	AL543_RS14795
AL543_RS14800	PF00486	Transcriptional regulatory protein, C terminal
AL543_RS14805	PF00183	Hsp90 protein
AL543_RS14805	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS14810	PF00406	Adenylate kinase
AL543_RS14810	PF05191	Adenylate kinase, active site lid
AL543_RS14815	PF00762	Ferrochelatase
AL543_RS14820	PF00854	POT family
AL543_RS14825	PF02357	Transcription termination factor nusG
AL543_RS14830	PF00733	Asparagine synthase
AL543_RS14830	PF13537	Glutamine amidotransferase domain
AL543_RS14835	PF00999	Sodium/hydrogen exchanger family
AL543_RS14835	PF02254	TrkA-N domain
AL543_RS14840	PF00480	ROK family
AL543_RS14845	PF01979	Amidohydrolase family
AL543_RS14850	PF00367	phosphotransferase system, EIIB
AL543_RS14850	PF02378	Phosphotransferase system, EIIC
AL543_RS14855	PF00749	tRNA synthetases class I (E and Q), catalytic domain
AL543_RS14855	PF03950	tRNA synthetases class I (E and Q), anti-codon binding domain
AL543_RS14865	PF01416	tRNA pseudouridine synthase
AL543_RS14870	PF01039	Carboxyl transferase domain
AL543_RS14875	PF02875	Mur ligase family, glutamate ligase domain
AL543_RS14875	PF08245	Mur ligase middle domain
AL543_RS14880	PF05036	Sporulation related domain
AL543_RS14885	PF02674	AL543_RS14885
AL543_RS14890	PF13522	Glutamine amidotransferase domain
AL543_RS14895	PF03553	AL543_RS14895
AL543_RS14895	PF13726	AL543_RS14895
AL543_RS14900	PF00929	Exonuclease
AL543_RS14905	PF00691	OmpA family
AL543_RS14910	PF10952	AL543_RS14910
AL543_RS14915	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL543_RS14920	PF00633	Helix-hairpin-helix motif
AL543_RS14920	PF00730	HhH-GPD superfamily base excision DNA repair protein
AL543_RS14920	PF10576	Iron-sulfur binding domain of endonuclease III
AL543_RS14925	PF02508	AL543_RS14925
AL543_RS14930	PF04205	FMN-binding domain
AL543_RS14935	PF03116	AL543_RS14935
AL543_RS14940	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
AL543_RS14940	PF10531	SLBB domain
AL543_RS14940	PF12838	4Fe-4S dicluster domain
AL543_RS14940	PF13375	RnfC Barrel sandwich hybrid domain
AL543_RS14945	PF04060	Putative Fe-S cluster
AL543_RS14945	PF14697	4Fe-4S dicluster domain
AL543_RS14950	PF02508	AL543_RS14950
AL543_RS14955	PF01797	Transposase IS200 like
AL543_RS14965	PF00271	Helicase conserved C-terminal domain
AL543_RS14965	PF02151	UvrB/uvrC motif
AL543_RS14965	PF04851	Type III restriction enzyme, res subunit
AL543_RS14965	PF12344	Ultra-violet resistance protein B
AL543_RS14970	PF00072	Response regulator receiver domain
AL543_RS14970	PF00158	Sigma-54 interaction domain
AL543_RS14970	PF02954	Bacterial regulatory protein, Fis family
AL543_RS14975	PF01627	Hpt domain
AL543_RS14980	PF01933	Uncharacterised protein family UPF0052
AL543_RS14985	PF04055	Radical SAM superfamily
AL543_RS14985	PF06463	Molybdenum Cofactor Synthesis C
AL543_RS14985	PF13353	4Fe-4S single cluster domain
AL543_RS14990	PF00994	Probable molybdopterin binding domain
AL543_RS14995	PF01967	MoaC family
AL543_RS15000	PF02597	ThiS family
AL543_RS15005	PF02391	MoaE protein
AL543_RS15020	PF00571	CBS domain
AL543_RS15025	PF00122	E1-E2 ATPase
AL543_RS15025	PF00403	Heavy-metal-associated domain
AL543_RS15025	PF00702	haloacid dehalogenase-like hydrolase
AL543_RS15030	PF13358	DDE superfamily endonuclease
AL543_RS15030	PF13551	Winged helix-turn helix
AL543_RS15030	PF13592	AL543_RS15030
AL543_RS15035	PF01048	Phosphorylase superfamily
AL543_RS15045	PF01588	Putative tRNA binding domain
AL543_RS15045	PF09334	tRNA synthetases class I (M)
AL543_RS15050	PF10609	ParA/MinD ATPase like
AL543_RS15060	PF00485	Phosphoribulokinase / Uridine kinase family
AL543_RS15065	PF05170	AL543_RS15065
AL543_RS15070	PF02572	ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
AL543_RS15070	PF12557	Cob(I)alamin adenosyltransferase N terminal
AL543_RS15075	PF01451	Low molecular weight phosphotyrosine protein phosphatase
AL543_RS15080	PF03349	Outer membrane protein transport protein (OMPP1/FadL/TodX)
AL543_RS15085	PF03349	Outer membrane protein transport protein (OMPP1/FadL/TodX)
AL543_RS15090	PF11859	AL543_RS15090
AL543_RS15095	PF04542	Sigma-70 region 2
AL543_RS15095	PF08281	Sigma-70, region 4
AL543_RS15105	PF00108	Thiolase, N-terminal domain
AL543_RS15105	PF02803	Thiolase, C-terminal domain
AL543_RS15110	PF00378	Enoyl-CoA hydratase/isomerase family
AL543_RS15110	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
AL543_RS15110	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
AL543_RS15115	PF00881	Nitroreductase family
AL543_RS15120	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS15120	PF03466	LysR substrate binding domain
AL543_RS15125	PF00072	Response regulator receiver domain
AL543_RS15135	PF04304	AL543_RS15135
AL543_RS15140	PF00156	Phosphoribosyl transferase domain
AL543_RS15145	PF12168	AL543_RS15145
AL543_RS15145	PF12169	DNA polymerase III subunits gamma and tau domain III
AL543_RS15145	PF12170	DNA polymerase III tau subunit V interacting with alpha
AL543_RS15145	PF13177	DNA polymerase III, delta subunit
AL543_RS15150	PF02575	YbaB/EbfC DNA-binding family
AL543_RS15155	PF02132	RecR protein
AL543_RS15155	PF13662	Toprim domain
AL543_RS15160	PF03692	AL543_RS15160
AL543_RS15165	PF03692	AL543_RS15165
AL543_RS15170	PF00106	short chain dehydrogenase
AL543_RS15175	PF01343	Peptidase family S49
AL543_RS15175	PF08496	AL543_RS15175
AL543_RS15180	PF00291	Pyridoxal-phosphate dependent enzyme
AL543_RS15185	PF01037	AsnC family
AL543_RS15185	PF13412	Winged helix-turn-helix DNA-binding
AL543_RS15190	PF13622	Thioesterase-like superfamily
AL543_RS15195	PF09619	Type III secretion system lipoprotein chaperone (YscW)
AL543_RS15200	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
AL543_RS15210	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL543_RS15210	PF00990	GGDEF domain
AL543_RS15230	PF12833	Helix-turn-helix domain
AL543_RS15230	PF12852	Cupin
AL543_RS15240	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS15245	PF00593	TonB dependent receptor
AL543_RS15245	PF07715	TonB-dependent Receptor Plug Domain
AL543_RS15250	PF13434	L-lysine 6-monooxygenase (NADPH-requiring)
AL543_RS15255	PF04183	IucA / IucC family
AL543_RS15255	PF06276	Ferric iron reductase FhuF-like transporter
AL543_RS15260	PF13523	Acetyltransferase (GNAT) domain
AL543_RS15265	PF04183	IucA / IucC family
AL543_RS15265	PF06276	Ferric iron reductase FhuF-like transporter
AL543_RS15270	PF01032	FecCD transport family
AL543_RS15275	PF01497	Periplasmic binding protein
AL543_RS15280	PF00005	ABC transporter
AL543_RS15285	PF07690	Major Facilitator Superfamily
AL543_RS15295	PF12802	MarR family
AL543_RS15300	PF00501	AMP-binding enzyme
AL543_RS15300	PF13193	AMP-binding enzyme C-terminal domain
AL543_RS15305	PF00550	Phosphopantetheine attachment site
AL543_RS15310	PF06339	AL543_RS15310
AL543_RS15315	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AL543_RS15315	PF01841	Transglutaminase-like superfamily
AL543_RS15315	PF02770	Acyl-CoA dehydrogenase, middle domain
AL543_RS15315	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AL543_RS15320	PF01323	DSBA-like thioredoxin domain
AL543_RS15325	PF00893	Small Multidrug Resistance protein
AL543_RS15330	PF00893	Small Multidrug Resistance protein
AL543_RS15335	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
AL543_RS15350	PF01022	Bacterial regulatory protein, arsR family
AL543_RS15355	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AL543_RS15355	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
AL543_RS15360	PF00782	Dual specificity phosphatase, catalytic domain
AL543_RS15365	PF07690	Major Facilitator Superfamily
AL543_RS15370	PF00455	AL543_RS15370
AL543_RS15370	PF08220	DeoR-like helix-turn-helix domain
AL543_RS15380	PF00455	AL543_RS15380
AL543_RS15380	PF08220	DeoR-like helix-turn-helix domain
AL543_RS15385	PF08013	Tagatose 6 phosphate kinase
AL543_RS15390	PF01380	SIS domain
AL543_RS15395	PF03830	PTS system sorbose subfamily IIB component
AL543_RS15400	PF03609	AL543_RS15400
AL543_RS15405	PF03613	AL543_RS15405
AL543_RS15410	PF03610	PTS system fructose IIA component
AL543_RS15415	PF01979	Amidohydrolase family
AL543_RS15420	PF01116	Fructose-bisphosphate aldolase class-II
AL543_RS15430	PF01609	Transposase DDE domain
AL543_RS15435	PF13358	DDE superfamily endonuclease
AL543_RS15435	PF13384	Homeodomain-like domain
AL543_RS15435	PF13592	AL543_RS15435
AL543_RS15445	PF00704	Glycosyl hydrolases family 18
AL543_RS15445	PF06483	AL543_RS15445
AL543_RS15445	PF14600	Cellulose-binding domain
AL543_RS15450	PF02517	CAAX protease self-immunity
AL543_RS15455	PF01161	Phosphatidylethanolamine-binding protein
AL543_RS15460	PF12833	Helix-turn-helix domain
AL543_RS15470	PF01300	Telomere recombination
AL543_RS15470	PF03481	Putative GTP-binding controlling metal-binding
AL543_RS15475	PF01627	Hpt domain
AL543_RS15480	PF00072	Response regulator receiver domain
AL543_RS15480	PF08668	HDOD domain
AL543_RS15485	PF00072	Response regulator receiver domain
AL543_RS15490	PF04509	CheC-like family
AL543_RS15495	PF00512	His Kinase A (phospho-acceptor) domain
AL543_RS15495	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS15495	PF08448	PAS fold
AL543_RS15500	PF00512	His Kinase A (phospho-acceptor) domain
AL543_RS15500	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS15505	PF00072	Response regulator receiver domain
AL543_RS15505	PF00563	EAL domain
AL543_RS15510	PF00072	Response regulator receiver domain
AL543_RS15510	PF13487	HD domain
AL543_RS15515	PF00672	HAMP domain
AL543_RS15515	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS15520	PF12974	ABC transporter, phosphonate, periplasmic substrate-binding protein
AL543_RS15525	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL543_RS15530	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS15535	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS15535	PF12911	AL543_RS15535
AL543_RS15540	PF00005	ABC transporter
AL543_RS15540	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL543_RS15545	PF00005	ABC transporter
AL543_RS15545	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL543_RS15550	PF13409	Glutathione S-transferase, N-terminal domain
AL543_RS15550	PF13410	Glutathione S-transferase, C-terminal domain
AL543_RS15555	PF01515	Phosphate acetyl/butaryl transferase
AL543_RS15555	PF07085	DRTGG domain
AL543_RS15555	PF13500	AAA domain
AL543_RS15560	PF00871	Acetokinase family
AL543_RS15565	PF04217	AL543_RS15565
AL543_RS15570	PF09905	Uncharacterized conserved protein (DUF2132)
AL543_RS15575	PF04392	ABC transporter substrate binding protein
AL543_RS15580	PF02653	AL543_RS15580
AL543_RS15585	PF00005	ABC transporter
AL543_RS15590	PF00990	GGDEF domain
AL543_RS15595	PF01207	Dihydrouridine synthase (Dus)
AL543_RS15600	PF02810	SEC-C motif
AL543_RS15600	PF03695	Uncharacterised protein family (UPF0149)
AL543_RS15605	PF03548	Outer membrane lipoprotein carrier protein LolA
AL543_RS15610	PF00004	ATPase family associated with various cellular activities (AAA)
AL543_RS15610	PF12002	MgsA AAA+ ATPase C terminal
AL543_RS15610	PF16193	AL543_RS15610
AL543_RS15615	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
AL543_RS15615	PF02403	Seryl-tRNA synthetase N-terminal domain
AL543_RS15620	PF00202	Aminotransferase class-III
AL543_RS15625	PF04055	Radical SAM superfamily
AL543_RS15625	PF06968	Biotin and Thiamin Synthesis associated domain
AL543_RS15630	PF00155	Aminotransferase class I and II
AL543_RS15635	PF08241	Methyltransferase domain
AL543_RS15640	PF13500	AAA domain
AL543_RS15650	PF01435	Peptidase family M48
AL543_RS15655	PF12680	SnoaL-like domain
AL543_RS15660	PF00106	short chain dehydrogenase
AL543_RS15665	PF01593	Flavin containing amine oxidoreductase
AL543_RS15670	PF07103	AL543_RS15670
AL543_RS15675	PF02353	Mycolic acid cyclopropane synthetase
AL543_RS15680	PF11086	AL543_RS15680
AL543_RS15685	PF16036	AL543_RS15685
AL543_RS15695	PF00206	Lyase
AL543_RS15695	PF08328	Adenylosuccinate lyase C-terminal
AL543_RS15700	PF04356	Protein of unknown function (DUF489)
AL543_RS15705	PF03054	tRNA methyl transferase
AL543_RS15710	PF00294	pfkB family carbohydrate kinase
AL543_RS15715	PF00816	H-NS histone family
AL543_RS15720	PF03553	AL543_RS15720
AL543_RS15725	PF01634	ATP phosphoribosyltransferase
AL543_RS15725	PF08029	HisG, C-terminal domain
AL543_RS15730	PF00815	Histidinol dehydrogenase
AL543_RS15735	PF00155	Aminotransferase class I and II
AL543_RS15740	PF00475	Imidazoleglycerol-phosphate dehydratase
AL543_RS15740	PF08645	Polynucleotide kinase 3 phosphatase
AL543_RS15745	PF00117	Glutamine amidotransferase class-I
AL543_RS15750	PF00977	Histidine biosynthesis protein
AL543_RS15755	PF00977	Histidine biosynthesis protein
AL543_RS15760	PF01502	Phosphoribosyl-AMP cyclohydrolase
AL543_RS15760	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
AL543_RS15765	PF00849	RNA pseudouridylate synthase
AL543_RS15770	PF03971	Monomeric isocitrate dehydrogenase
AL543_RS15775	PF00313	'Cold-shock' DNA-binding domain
AL543_RS15780	PF02617	ATP-dependent Clp protease adaptor protein ClpS
AL543_RS15785	PF00004	ATPase family associated with various cellular activities (AAA)
AL543_RS15785	PF02861	Clp amino terminal domain
AL543_RS15785	PF07724	AAA domain (Cdc48 subfamily)
AL543_RS15785	PF10431	C-terminal, D2-small domain, of ClpB protein
AL543_RS15790	PF02080	TrkA-C domain
AL543_RS15790	PF06826	AL543_RS15790
AL543_RS15795	PF00462	Glutaredoxin
AL543_RS15805	PF00465	Iron-containing alcohol dehydrogenase
AL543_RS15810	PF01380	SIS domain
AL543_RS15810	PF01418	Helix-turn-helix domain, rpiR family
AL543_RS15820	PF00282	Pyridoxal-dependent decarboxylase conserved domain
AL543_RS15830	PF03956	AL543_RS15830
AL543_RS15835	PF08668	HDOD domain
AL543_RS15840	PF04993	TfoX N-terminal domain
AL543_RS15840	PF04994	TfoX C-terminal domain
AL543_RS15855	PF00072	Response regulator receiver domain
AL543_RS15860	PF00027	Cyclic nucleotide-binding domain
AL543_RS15860	PF00512	His Kinase A (phospho-acceptor) domain
AL543_RS15860	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS15865	PF06097	AL543_RS15865
AL543_RS15870	PF01609	Transposase DDE domain
AL543_RS15870	PF13006	AL543_RS15870
AL543_RS15875	PF00266	Aminotransferase class-V
AL543_RS15880	PF14397	AL543_RS15880
AL543_RS15885	PF14400	AL543_RS15885
AL543_RS15885	PF14402	AL543_RS15885
AL543_RS15890	PF05618	Putative ATP-dependant zinc protease
AL543_RS15895	PF08003	Protein of unknown function (DUF1698)
AL543_RS15900	PF13649	Methyltransferase domain
AL543_RS15905	PF01904	Protein of unknown function DUF72
AL543_RS15910	PF00152	tRNA synthetases class II (D, K and N)
AL543_RS15910	PF01336	OB-fold nucleic acid binding domain
AL543_RS15910	PF02938	GAD domain
AL543_RS15915	PF00265	Thymidine kinase
AL543_RS15920	PF00375	Sodium:dicarboxylate symporter family
AL543_RS15925	PF00290	Tryptophan synthase alpha chain
AL543_RS15930	PF00291	Pyridoxal-phosphate dependent enzyme
AL543_RS15935	PF00218	Indole-3-glycerol phosphate synthase
AL543_RS15935	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
AL543_RS15940	PF00591	Glycosyl transferase family, a/b domain
AL543_RS15940	PF02885	Glycosyl transferase family, helical bundle domain
AL543_RS15945	PF00117	Glutamine amidotransferase class-I
AL543_RS15950	PF00425	chorismate binding enzyme
AL543_RS15950	PF04715	Anthranilate synthase component I, N terminal region
AL543_RS15955	PF08056	AL543_RS15955
AL543_RS15960	PF02811	PHP domain
AL543_RS15965	PF01300	Telomere recombination
AL543_RS15970	PF00849	RNA pseudouridylate synthase
AL543_RS15970	PF01479	S4 domain
AL543_RS15975	PF00005	ABC transporter
AL543_RS15980	PF00005	ABC transporter
AL543_RS15980	PF00664	ABC transporter transmembrane region
AL543_RS15985	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL543_RS15990	PF10014	2OG-Fe dioxygenase
AL543_RS15995	PF00266	Aminotransferase class-V
AL543_RS16000	PF00990	GGDEF domain
AL543_RS16005	PF02698	DUF218 domain
AL543_RS16010	PF11872	AL543_RS16010
AL543_RS16015	PF00390	Malic enzyme, N-terminal domain
AL543_RS16015	PF03949	Malic enzyme, NAD binding domain
AL543_RS16025	PF01259	SAICAR synthetase
AL543_RS16040	PF08238	Sel1 repeat
AL543_RS16045	PF00691	OmpA family
AL543_RS16045	PF13488	AL543_RS16045
AL543_RS16050	PF10979	AL543_RS16050
AL543_RS16055	PF11813	AL543_RS16055
AL543_RS16060	PF01565	FAD binding domain
AL543_RS16060	PF02913	FAD linked oxidases, C-terminal domain
AL543_RS16060	PF13183	4Fe-4S dicluster domain
AL543_RS16065	PF04191	Phospholipid methyltransferase
AL543_RS16070	PF00089	Trypsin
AL543_RS16075	PF12119	AL543_RS16075
AL543_RS16080	PF00221	Aromatic amino acid lyase
AL543_RS16085	PF01175	Urocanase
AL543_RS16085	PF17391	AL543_RS16085
AL543_RS16085	PF17392	AL543_RS16085
AL543_RS16090	PF00491	Arginase family
AL543_RS16095	PF01979	Amidohydrolase family
AL543_RS16100	PF00392	Bacterial regulatory proteins, gntR family
AL543_RS16100	PF07702	UTRA domain
AL543_RS16105	PF11383	AL543_RS16105
AL543_RS16110	PF04269	Protein of unknown function, DUF440
AL543_RS16115	PF01132	Elongation factor P (EF-P) OB domain
AL543_RS16115	PF08207	Elongation factor P (EF-P) KOW-like domain
AL543_RS16115	PF09285	Elongation factor P, C-terminal
AL543_RS16120	PF01909	Nucleotidyltransferase domain
AL543_RS16125	PF00563	EAL domain
AL543_RS16125	PF02378	Phosphotransferase system, EIIC
AL543_RS16130	PF00136	DNA polymerase family B
AL543_RS16130	PF03104	DNA polymerase family B, exonuclease domain
AL543_RS16135	PF00072	Response regulator receiver domain
AL543_RS16135	PF00196	Bacterial regulatory proteins, luxR family
AL543_RS16140	PF01541	GIY-YIG catalytic domain
AL543_RS16140	PF02151	UvrB/uvrC motif
AL543_RS16140	PF08459	UvrC Helix-hairpin-helix N-terminal
AL543_RS16140	PF14520	Helix-hairpin-helix domain
AL543_RS16145	PF01066	CDP-alcohol phosphatidyltransferase
AL543_RS16170	PF01797	Transposase IS200 like
AL543_RS16180	PF13358	DDE superfamily endonuclease
AL543_RS16180	PF13551	Winged helix-turn helix
AL543_RS16180	PF13592	AL543_RS16180
AL543_RS16190	PF00583	Acetyltransferase (GNAT) family
AL543_RS16195	PF01409	tRNA synthetases class II core domain (F)
AL543_RS16195	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
AL543_RS16200	PF01588	Putative tRNA binding domain
AL543_RS16200	PF03147	Ferredoxin-fold anticodon binding domain
AL543_RS16200	PF03483	B3/4 domain
AL543_RS16200	PF03484	tRNA synthetase B5 domain
AL543_RS16205	PF00216	Bacterial DNA-binding protein
AL543_RS16215	PF04607	Region found in RelA / SpoT proteins
AL543_RS16220	PF05724	Thiopurine S-methyltransferase (TPMT)
AL543_RS16225	PF02222	ATP-grasp domain
AL543_RS16230	PF03547	AL543_RS16230
AL543_RS16235	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
AL543_RS16235	PF08211	Cytidine and deoxycytidylate deaminase zinc-binding region
AL543_RS16240	PF04172	AL543_RS16240
AL543_RS16245	PF03788	AL543_RS16245
AL543_RS16250	PF00929	Exonuclease
AL543_RS16250	PF08411	Exonuclease C-terminal
AL543_RS16255	PF00375	Sodium:dicarboxylate symporter family
AL543_RS16260	PF01641	SelR domain
AL543_RS16265	PF02277	Phosphoribosyltransferase
AL543_RS16270	PF02654	AL543_RS16270
AL543_RS16275	PF02283	Cobinamide kinase / cobinamide phosphate guanyltransferase
AL543_RS16280	PF00300	Histidine phosphatase superfamily (branch 1)
AL543_RS16285	PF04952	Succinylglutamate desuccinylase / Aspartoacylase family
AL543_RS16290	PF01032	FecCD transport family
AL543_RS16295	PF00005	ABC transporter
AL543_RS16300	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
AL543_RS16305	PF11042	AL543_RS16305
AL543_RS16310	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS16310	PF00672	HAMP domain
AL543_RS16310	PF17200	AL543_RS16310
AL543_RS16315	PF13740	ACT domain
AL543_RS16320	PF13084	AL543_RS16320
AL543_RS16325	PF00994	Probable molybdopterin binding domain
AL543_RS16335	PF00111	2Fe-2S iron-sulfur cluster binding domain
AL543_RS16340	PF00268	Ribonucleotide reductase, small chain
AL543_RS16345	PF00317	Ribonucleotide reductase, all-alpha domain
AL543_RS16345	PF02867	Ribonucleotide reductase, barrel domain
AL543_RS16345	PF03477	ATP cone domain
AL543_RS16355	PF13489	Methyltransferase domain
AL543_RS16360	PF00521	DNA gyrase/topoisomerase IV, subunit A
AL543_RS16360	PF03989	DNA gyrase C-terminal domain, beta-propeller
AL543_RS16370	PF02335	Cytochrome c552
AL543_RS16375	PF09699	Doubled CXXCH motif (Paired_CXXCH_1)
AL543_RS16380	PF13247	4Fe-4S dicluster domain
AL543_RS16385	PF03916	AL543_RS16385
AL543_RS16390	PF01578	AL543_RS16390
AL543_RS16390	PF16327	AL543_RS16390
AL543_RS16395	PF08534	Redoxin
AL543_RS16400	PF03918	Cytochrome C biogenesis protein
AL543_RS16410	PF00313	'Cold-shock' DNA-binding domain
AL543_RS16415	PF00581	Rhodanese-like domain
AL543_RS16420	PF12833	Helix-turn-helix domain
AL543_RS16430	PF01609	Transposase DDE domain
AL543_RS16450	PF00925	GTP cyclohydrolase II
AL543_RS16455	PF09375	Imelysin
AL543_RS16460	PF06537	AL543_RS16460
AL543_RS16465	PF09375	Imelysin
AL543_RS16470	PF07433	AL543_RS16470
AL543_RS16475	PF01471	Putative peptidoglycan binding domain
AL543_RS16475	PF03734	L,D-transpeptidase catalytic domain
AL543_RS16480	PF05951	AL543_RS16480
AL543_RS16485	PF00753	Metallo-beta-lactamase superfamily
AL543_RS16490	PF11201	AL543_RS16490
AL543_RS16500	PF03480	Bacterial extracellular solute-binding protein, family 7
AL543_RS16505	PF04290	AL543_RS16505
AL543_RS16510	PF06808	AL543_RS16510
AL543_RS16520	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS16520	PF07730	Histidine kinase
AL543_RS16520	PF17200	AL543_RS16520
AL543_RS16525	PF00072	Response regulator receiver domain
AL543_RS16525	PF00196	Bacterial regulatory proteins, luxR family
AL543_RS16530	PF01047	MarR family
AL543_RS16535	PF02028	BCCT family transporter
AL543_RS16540	PF01522	Polysaccharide deacetylase
AL543_RS16545	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL543_RS16550	PF02378	Phosphotransferase system, EIIC
AL543_RS16555	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
AL543_RS16560	PF02056	Family 4 glycosyl hydrolase
AL543_RS16560	PF11975	Family 4 glycosyl hydrolase C-terminal domain
AL543_RS16565	PF04794	YdjC-like protein
AL543_RS16570	PF00356	Bacterial regulatory proteins, lacI family
AL543_RS16570	PF13377	Periplasmic binding protein-like domain
AL543_RS16575	PF13506	Glycosyl transferase family 21
AL543_RS16580	PF04349	Periplasmic glucan biosynthesis protein, MdoG
AL543_RS16585	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS16585	PF00672	HAMP domain
AL543_RS16585	PF02743	Cache domain
AL543_RS16590	PF00929	Exonuclease
AL543_RS16595	PF00027	Cyclic nucleotide-binding domain
AL543_RS16595	PF00571	CBS domain
AL543_RS16595	PF03445	AL543_RS16595
AL543_RS16595	PF10335	AL543_RS16595
AL543_RS16600	PF00155	Aminotransferase class I and II
AL543_RS16605	PF01966	HD domain
AL543_RS16610	PF00132	Bacterial transferase hexapeptide (six repeats)
AL543_RS16615	PF08543	Phosphomethylpyrimidine kinase
AL543_RS16620	PF00152	tRNA synthetases class II (D, K and N)
AL543_RS16620	PF01336	OB-fold nucleic acid binding domain
AL543_RS16625	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS16630	PF01242	6-pyruvoyl tetrahydropterin synthase
AL543_RS16635	PF03313	AL543_RS16635
AL543_RS16635	PF03315	Serine dehydratase beta chain
AL543_RS16640	PF03222	Tryptophan/tyrosine permease family
AL543_RS16645	PF00293	NUDIX domain
AL543_RS16650	PF00425	chorismate binding enzyme
AL543_RS16650	PF04715	Anthranilate synthase component I, N terminal region
AL543_RS16655	PF05681	AL543_RS16655
AL543_RS16655	PF05683	Fumarase C-terminus
AL543_RS16665	PF04317	AL543_RS16665
AL543_RS16670	PF05128	AL543_RS16670
AL543_RS16675	PF00158	Sigma-54 interaction domain
AL543_RS16675	PF00989	PAS fold
AL543_RS16680	PF13302	Acetyltransferase (GNAT) domain
AL543_RS16685	PF13023	HD domain
AL543_RS16690	PF11163	AL543_RS16690
AL543_RS16695	PF00892	EamA-like transporter family
AL543_RS16700	PF00842	Alanine racemase, C-terminal domain
AL543_RS16700	PF01168	Alanine racemase, N-terminal domain
AL543_RS16705	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS16705	PF12729	AL543_RS16705
AL543_RS16710	PF00939	Sodium:sulfate symporter transmembrane region
AL543_RS16715	PF00027	Cyclic nucleotide-binding domain
AL543_RS16715	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS16720	PF00072	Response regulator receiver domain
AL543_RS16725	PF04393	AL543_RS16725
AL543_RS16730	PF06629	AL543_RS16730
AL543_RS16735	PF00512	His Kinase A (phospho-acceptor) domain
AL543_RS16735	PF00672	HAMP domain
AL543_RS16735	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS16740	PF00072	Response regulator receiver domain
AL543_RS16740	PF00486	Transcriptional regulatory protein, C terminal
AL543_RS16745	PF00912	Transglycosylase
AL543_RS16750	PF04400	AL543_RS16750
AL543_RS16755	PF02579	Dinitrogenase iron-molybdenum cofactor
AL543_RS16760	PF13358	DDE superfamily endonuclease
AL543_RS16760	PF13384	Homeodomain-like domain
AL543_RS16760	PF13592	AL543_RS16760
AL543_RS16770	PF13407	Periplasmic binding protein domain
AL543_RS16775	PF00005	ABC transporter
AL543_RS16780	PF02653	AL543_RS16780
AL543_RS16790	PF01970	AL543_RS16790
AL543_RS16795	PF07331	AL543_RS16795
AL543_RS16800	PF03401	Tripartite tricarboxylate transporter family receptor
AL543_RS16810	PF00392	Bacterial regulatory proteins, gntR family
AL543_RS16810	PF07729	FCD domain
AL543_RS16815	PF13714	Phosphoenolpyruvate phosphomutase
AL543_RS16820	PF00285	Citrate synthase
AL543_RS16825	PF00330	Aconitase family (aconitate hydratase)
AL543_RS16825	PF00694	Aconitase C-terminal domain
AL543_RS16830	PF04303	PrpF protein
AL543_RS16835	PF00501	AMP-binding enzyme
AL543_RS16835	PF13193	AMP-binding enzyme C-terminal domain
AL543_RS16835	PF16177	AL543_RS16835
AL543_RS16840	PF00583	Acetyltransferase (GNAT) family
AL543_RS16845	PF00293	NUDIX domain
AL543_RS16850	PF01546	Peptidase family M20/M25/M40
AL543_RS16850	PF07687	Peptidase dimerisation domain
AL543_RS16855	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL543_RS16855	PF14696	Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal
AL543_RS16860	PF04209	homogentisate 1,2-dioxygenase
AL543_RS16865	PF01557	Fumarylacetoacetate (FAA) hydrolase family
AL543_RS16870	PF13417	Glutathione S-transferase, N-terminal domain
AL543_RS16870	PF14497	Glutathione S-transferase, C-terminal domain
AL543_RS16875	PF00072	Response regulator receiver domain
AL543_RS16875	PF13487	HD domain
AL543_RS16880	PF00072	Response regulator receiver domain
AL543_RS16880	PF00512	His Kinase A (phospho-acceptor) domain
AL543_RS16880	PF01627	Hpt domain
AL543_RS16880	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS16880	PF08448	PAS fold
AL543_RS16885	PF08534	Redoxin
AL543_RS16890	PF13358	DDE superfamily endonuclease
AL543_RS16890	PF13551	Winged helix-turn helix
AL543_RS16890	PF13592	AL543_RS16890
AL543_RS16895	PF00990	GGDEF domain
AL543_RS16895	PF07494	Two component regulator propeller
AL543_RS16895	PF07495	Y_Y_Y domain
AL543_RS16900	PF10672	S-adenosylmethionine-dependent methyltransferase
AL543_RS16905	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS16910	PF00708	Acylphosphatase
AL543_RS16915	PF04358	DsrC like protein
AL543_RS16920	PF01027	Inhibitor of apoptosis-promoting Bax1
AL543_RS16925	PF00005	ABC transporter
AL543_RS16930	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS16935	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS16940	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL543_RS16945	PF10414	Sirohaem synthase dimerisation region
AL543_RS16945	PF13241	Putative NAD(P)-binding
AL543_RS16950	PF08282	haloacid dehalogenase-like hydrolase
AL543_RS16955	PF04055	Radical SAM superfamily
AL543_RS16955	PF13394	4Fe-4S single cluster domain
AL543_RS16960	PF06508	Queuosine biosynthesis protein QueC
AL543_RS16965	PF00990	GGDEF domain
AL543_RS16965	PF13181	Tetratricopeptide repeat
AL543_RS16965	PF13424	Tetratricopeptide repeat
AL543_RS16975	PF09084	NMT1/THI5 like
AL543_RS16980	PF00990	GGDEF domain
AL543_RS16990	PF00990	GGDEF domain
AL543_RS16995	PF00012	Hsp70 protein
AL543_RS16995	PF12531	AL543_RS16995
AL543_RS17000	PF00012	Hsp70 protein
AL543_RS17005	PF10816	AL543_RS17005
AL543_RS17010	PF00990	GGDEF domain
AL543_RS17010	PF03924	CHASE domain
AL543_RS17015	PF00929	Exonuclease
AL543_RS17020	PF05099	Tellurite resistance protein TerB
AL543_RS17030	PF00270	DEAD/DEAH box helicase
AL543_RS17030	PF00271	Helicase conserved C-terminal domain
AL543_RS17030	PF04408	Helicase associated domain (HA2)
AL543_RS17030	PF07717	Oligonucleotide/oligosaccharide-binding (OB)-fold
AL543_RS17030	PF11898	AL543_RS17030
AL543_RS17035	PF13505	Outer membrane protein beta-barrel domain
AL543_RS17040	PF03738	Glutathionylspermidine synthase preATP-grasp
AL543_RS17045	PF06693	AL543_RS17045
AL543_RS17050	PF03994	AL543_RS17050
AL543_RS17055	PF13358	DDE superfamily endonuclease
AL543_RS17055	PF13384	Homeodomain-like domain
AL543_RS17055	PF13592	AL543_RS17055
AL543_RS17070	PF01609	Transposase DDE domain
AL543_RS17080	PF10013	AL543_RS17080
AL543_RS17085	PF01979	Amidohydrolase family
AL543_RS17090	PF00012	Hsp70 protein
AL543_RS17095	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS17095	PF03466	LysR substrate binding domain
AL543_RS17100	PF07690	Major Facilitator Superfamily
AL543_RS17105	PF00893	Small Multidrug Resistance protein
AL543_RS17110	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS17110	PF00672	HAMP domain
AL543_RS17115	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS17115	PF08447	PAS fold
AL543_RS17115	PF08448	PAS fold
AL543_RS17120	PF00270	DEAD/DEAH box helicase
AL543_RS17120	PF00271	Helicase conserved C-terminal domain
AL543_RS17125	PF12833	Helix-turn-helix domain
AL543_RS17130	PF02423	Ornithine cyclodeaminase/mu-crystallin family
AL543_RS17135	PF01042	Endoribonuclease L-PSP
AL543_RS17140	PF01266	FAD dependent oxidoreductase
AL543_RS17145	PF00582	Universal stress protein family
AL543_RS17150	PF03401	Tripartite tricarboxylate transporter family receptor
AL543_RS17160	PF01970	AL543_RS17160
AL543_RS17165	PF00171	Aldehyde dehydrogenase family
AL543_RS17170	PF11391	AL543_RS17170
AL543_RS17175	PF01613	Flavin reductase like domain
AL543_RS17180	PF01047	MarR family
AL543_RS17185	PF06808	AL543_RS17185
AL543_RS17190	PF04290	AL543_RS17190
AL543_RS17195	PF03480	Bacterial extracellular solute-binding protein, family 7
AL543_RS17205	PF03328	HpcH/HpaI aldolase/citrate lyase family
AL543_RS17210	PF01557	Fumarylacetoacetate (FAA) hydrolase family
AL543_RS17215	PF01557	Fumarylacetoacetate (FAA) hydrolase family
AL543_RS17220	PF00171	Aldehyde dehydrogenase family
AL543_RS17225	PF02962	5-carboxymethyl-2-hydroxymuconate isomerase
AL543_RS17230	PF03547	AL543_RS17230
AL543_RS17235	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
AL543_RS17240	PF00171	Aldehyde dehydrogenase family
AL543_RS17245	PF02311	AraC-like ligand binding domain
AL543_RS17245	PF12833	Helix-turn-helix domain
AL543_RS17250	PF08028	Acyl-CoA dehydrogenase, C-terminal domain
AL543_RS17255	PF02074	Carboxypeptidase Taq (M32) metallopeptidase
AL543_RS17260	PF05638	Protein of unknown function (DUF796)
AL543_RS17265	PF05954	Phage late control gene D protein (GPD)
AL543_RS17270	PF13503	AL543_RS17270
AL543_RS17275	PF09994	Uncharacterized alpha/beta hydrolase domain (DUF2235)
AL543_RS17280	PF11153	AL543_RS17280
AL543_RS17285	PF01810	AL543_RS17285
AL543_RS17290	PF01235	AL543_RS17290
AL543_RS17305	PF00990	GGDEF domain
AL543_RS17310	PF00072	Response regulator receiver domain
AL543_RS17310	PF00512	His Kinase A (phospho-acceptor) domain
AL543_RS17310	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS17310	PF12860	AL543_RS17310
AL543_RS17315	PF08495	AL543_RS17315
AL543_RS17315	PF10442	AL543_RS17315
AL543_RS17320	PF00072	Response regulator receiver domain
AL543_RS17320	PF00196	Bacterial regulatory proteins, luxR family
AL543_RS17325	PF00171	Aldehyde dehydrogenase family
AL543_RS17330	PF13416	Bacterial extracellular solute-binding protein
AL543_RS17335	PF13416	Bacterial extracellular solute-binding protein
AL543_RS17340	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS17345	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS17350	PF00005	ABC transporter
AL543_RS17350	PF08402	TOBE domain
AL543_RS17355	PF13358	DDE superfamily endonuclease
AL543_RS17355	PF13551	Winged helix-turn helix
AL543_RS17355	PF13592	AL543_RS17355
AL543_RS17365	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
AL543_RS17370	PF11205	AL543_RS17370
AL543_RS17375	PF01171	PP-loop family
AL543_RS17380	PF00582	Universal stress protein family
AL543_RS17385	PF00027	Cyclic nucleotide-binding domain
AL543_RS17385	PF13545	Crp-like helix-turn-helix domain
AL543_RS17390	PF13386	AL543_RS17390
AL543_RS17395	PF03597	AL543_RS17395
AL543_RS17400	PF00122	E1-E2 ATPase
AL543_RS17400	PF00403	Heavy-metal-associated domain
AL543_RS17400	PF00702	haloacid dehalogenase-like hydrolase
AL543_RS17400	PF12156	AL543_RS17400
AL543_RS17405	PF05751	AL543_RS17405
AL543_RS17410	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
AL543_RS17410	PF14715	N-terminal domain of cytochrome oxidase-cbb3, FixP
AL543_RS17415	PF05545	AL543_RS17415
AL543_RS17420	PF02433	Cytochrome C oxidase, mono-heme subunit/FixO
AL543_RS17425	PF00115	Cytochrome C and Quinol oxidase polypeptide I
AL543_RS17435	PF08495	AL543_RS17435
AL543_RS17435	PF10442	AL543_RS17435
AL543_RS17440	PF00072	Response regulator receiver domain
AL543_RS17440	PF00512	His Kinase A (phospho-acceptor) domain
AL543_RS17440	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS17470	PF12321	AL543_RS17470
AL543_RS17475	PF06303	Organiser of macrodomain of Terminus of chromosome
AL543_RS17475	PF17414	AL543_RS17475
AL543_RS17480	PF05362	Lon protease (S16) C-terminal proteolytic domain
AL543_RS17480	PF13654	AAA domain
AL543_RS17485	PF07977	FabA-like domain
AL543_RS17490	PF04957	Ribosome modulation factor
AL543_RS17495	PF11949	AL543_RS17495
AL543_RS17500	PF00005	ABC transporter
AL543_RS17500	PF12848	ABC transporter
AL543_RS17500	PF16326	AL543_RS17500
AL543_RS17505	PF05768	Glutaredoxin-like domain (DUF836)
AL543_RS17510	PF01170	Putative RNA methylase family UPF0020
AL543_RS17510	PF02926	THUMP domain
AL543_RS17510	PF10672	S-adenosylmethionine-dependent methyltransferase
AL543_RS17515	PF07126	AL543_RS17515
AL543_RS17520	PF01180	Dihydroorotate dehydrogenase
AL543_RS17525	PF05088	AL543_RS17525
AL543_RS17530	PF11197	AL543_RS17530
AL543_RS17535	PF01433	Peptidase family M1
AL543_RS17535	PF11940	Domain of unknown function (DUF3458)
AL543_RS17535	PF17432	AL543_RS17535
AL543_RS17545	PF00595	PDZ domain (Also known as DHR or GLGF)
AL543_RS17545	PF03572	Peptidase family S41
AL543_RS17545	PF08180	AL543_RS17545
AL543_RS17545	PF11818	AL543_RS17545
AL543_RS17550	PF04352	ProQ/FINO family
AL543_RS17550	PF17516	AL543_RS17550
AL543_RS17555	PF13185	GAF domain
AL543_RS17565	PF04403	AL543_RS17565
AL543_RS17570	PF02470	AL543_RS17570
AL543_RS17575	PF01189	NOL1/NOP2/sun family
AL543_RS17575	PF13636	pre-rRNA processing and ribosome biogenesis
AL543_RS17575	PF17125	AL543_RS17575
AL543_RS17580	PF13509	S1 domain
AL543_RS17590	PF14539	Domain of unknown function (DUF4442)
AL543_RS17595	PF00793	DAHP synthetase I family
AL543_RS17600	PF04461	Protein of unknown function (DUF520)
AL543_RS17605	PF02146	Sir2 family
AL543_RS17610	PF00909	Ammonium Transporter Family
AL543_RS17625	PF01292	Prokaryotic cytochrome b561
AL543_RS17630	PF13247	4Fe-4S dicluster domain
AL543_RS17635	PF00384	Molybdopterin oxidoreductase
AL543_RS17635	PF01568	Molydopterin dinucleotide binding domain
AL543_RS17635	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
AL543_RS17640	PF10518	TAT (twin-arginine translocation) pathway signal sequence
AL543_RS17645	PF02613	Nitrate reductase delta subunit
AL543_RS17650	PF12838	4Fe-4S dicluster domain
AL543_RS17650	PF13187	4Fe-4S dicluster domain
AL543_RS17655	PF11748	AL543_RS17655
AL543_RS17660	PF11749	AL543_RS17660
AL543_RS17665	PF02634	FdhD/NarQ family
AL543_RS17670	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS17670	PF00672	HAMP domain
AL543_RS17675	PF00005	ABC transporter
AL543_RS17675	PF12848	ABC transporter
AL543_RS17680	PF00512	His Kinase A (phospho-acceptor) domain
AL543_RS17680	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS17680	PF17202	AL543_RS17680
AL543_RS17685	PF00072	Response regulator receiver domain
AL543_RS17685	PF00158	Sigma-54 interaction domain
AL543_RS17685	PF02954	Bacterial regulatory protein, Fis family
AL543_RS17690	PF12849	PBP superfamily domain
AL543_RS17695	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS17700	PF00005	ABC transporter
AL543_RS17705	PF12804	MobA-like NTP transferase domain
AL543_RS17710	PF00994	Probable molybdopterin binding domain
AL543_RS17710	PF03205	Molybdopterin guanine dinucleotide synthesis protein B
AL543_RS17710	PF03453	MoeA N-terminal region (domain I and II)
AL543_RS17710	PF03454	MoeA C-terminal region (domain IV)
AL543_RS17715	PF11173	AL543_RS17715
AL543_RS17720	PF00480	ROK family
AL543_RS17725	PF03942	AL543_RS17725
AL543_RS17730	PF04116	AL543_RS17730
AL543_RS17735	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS17740	PF00877	NlpC/P60 family
AL543_RS17745	PF12290	AL543_RS17745
AL543_RS17750	PF03881	Fructosamine kinase
AL543_RS17755	PF14255	AL543_RS17755
AL543_RS17760	PF01554	MatE
AL543_RS17765	PF11279	AL543_RS17765
AL543_RS17770	PF01068	ATP dependent DNA ligase domain
AL543_RS17770	PF14743	DNA ligase OB-like domain
AL543_RS17780	PF03544	Gram-negative bacterial TonB protein C-terminal
AL543_RS17785	PF02472	Biopolymer transport protein ExbD/TolR
AL543_RS17790	PF01618	AL543_RS17790
AL543_RS17795	PF01618	AL543_RS17795
AL543_RS17800	PF11932	AL543_RS17800
AL543_RS17810	PF13416	Bacterial extracellular solute-binding protein
AL543_RS17815	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS17820	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS17825	PF00005	ABC transporter
AL543_RS17830	PF00455	AL543_RS17830
AL543_RS17830	PF08220	DeoR-like helix-turn-helix domain
AL543_RS17835	PF03009	Glycerophosphoryl diester phosphodiesterase family
AL543_RS17840	PF04074	Domain of unknown function (DUF386)
AL543_RS17845	PF01042	Endoribonuclease L-PSP
AL543_RS17850	PF00356	Bacterial regulatory proteins, lacI family
AL543_RS17850	PF13377	Periplasmic binding protein-like domain
AL543_RS17855	PF00232	Glycosyl hydrolase family 1
AL543_RS17860	PF00141	Peroxidase
AL543_RS17865	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS17865	PF03466	LysR substrate binding domain
AL543_RS17870	PF00753	Metallo-beta-lactamase superfamily
AL543_RS17875	PF16576	AL543_RS17875
AL543_RS17880	PF02321	Outer membrane efflux protein
AL543_RS17885	PF02687	AL543_RS17885
AL543_RS17885	PF12704	MacB-like periplasmic core domain
AL543_RS17890	PF02687	AL543_RS17890
AL543_RS17890	PF12704	MacB-like periplasmic core domain
AL543_RS17895	PF00005	ABC transporter
AL543_RS17900	PF00268	Ribonucleotide reductase, small chain
AL543_RS17905	PF00317	Ribonucleotide reductase, all-alpha domain
AL543_RS17905	PF02867	Ribonucleotide reductase, barrel domain
AL543_RS17905	PF08343	Ribonucleotide reductase N-terminal
AL543_RS17910	PF07972	NrdI Flavodoxin like
AL543_RS17915	PF00462	Glutaredoxin
AL543_RS17920	PF02657	Fe-S metabolism associated domain
AL543_RS17925	PF00266	Aminotransferase class-V
AL543_RS17930	PF01458	Uncharacterized protein family (UPF0051)
AL543_RS17935	PF00005	ABC transporter
AL543_RS17940	PF01458	Uncharacterized protein family (UPF0051)
AL543_RS17945	PF01521	Iron-sulphur cluster biosynthesis
AL543_RS17955	PF00206	Lyase
AL543_RS17955	PF10415	Fumarase C C-terminus
AL543_RS17965	PF04342	AL543_RS17965
AL543_RS17970	PF09900	AL543_RS17970
AL543_RS17975	PF04266	ASCH domain
AL543_RS17980	PF00080	Copper/zinc superoxide dismutase (SODC)
AL543_RS17985	PF12796	Ankyrin repeats (3 copies)
AL543_RS17990	PF00199	Catalase
AL543_RS17990	PF06628	Catalase-related immune-responsive
AL543_RS17995	PF04224	AL543_RS17995
AL543_RS18000	PF13322	AL543_RS18000
AL543_RS18000	PF13402	Peptidase M60-like family
AL543_RS18000	PF17291	AL543_RS18000
AL543_RS18010	PF01263	Aldose 1-epimerase
AL543_RS18015	PF00288	GHMP kinases N terminal domain
AL543_RS18015	PF08544	GHMP kinases C terminal
AL543_RS18015	PF10509	Galactokinase galactose-binding signature
AL543_RS18020	PF01087	Galactose-1-phosphate uridyl transferase, N-terminal domain
AL543_RS18020	PF02744	Galactose-1-phosphate uridyl transferase, C-terminal domain
AL543_RS18025	PF07690	Major Facilitator Superfamily
AL543_RS18040	PF00990	GGDEF domain
AL543_RS18045	PF10881	AL543_RS18045
AL543_RS18055	PF00072	Response regulator receiver domain
AL543_RS18055	PF01584	CheW-like domain
AL543_RS18060	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL543_RS18065	PF00072	Response regulator receiver domain
AL543_RS18065	PF12431	AL543_RS18065
AL543_RS18070	PF00989	PAS fold
AL543_RS18070	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS18070	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
AL543_RS18070	PF17203	AL543_RS18070
AL543_RS18080	PF02321	Outer membrane efflux protein
AL543_RS18085	PF16576	AL543_RS18085
AL543_RS18090	PF12698	ABC-2 family transporter protein
AL543_RS18095	PF12698	ABC-2 family transporter protein
AL543_RS18100	PF13671	AAA domain
AL543_RS18105	PF04204	Homoserine O-succinyltransferase
AL543_RS18110	PF13424	Tetratricopeptide repeat
AL543_RS18120	PF05971	Protein of unknown function (DUF890)
AL543_RS18125	PF01863	Protein of unknown function DUF45
AL543_RS18130	PF00462	Glutaredoxin
AL543_RS18135	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS18135	PF03466	LysR substrate binding domain
AL543_RS18140	PF07690	Major Facilitator Superfamily
AL543_RS18145	PF07209	AL543_RS18145
AL543_RS18150	PF00092	von Willebrand factor type A domain
AL543_RS18160	PF02321	Outer membrane efflux protein
AL543_RS18165	PF00691	OmpA family
AL543_RS18175	PF03435	Saccharopine dehydrogenase
AL543_RS18175	PF16653	AL543_RS18175
AL543_RS18180	PF00202	Aminotransferase class-III
AL543_RS18180	PF00282	Pyridoxal-dependent decarboxylase conserved domain
AL543_RS18190	PF13358	DDE superfamily endonuclease
AL543_RS18190	PF13551	Winged helix-turn helix
AL543_RS18190	PF13592	AL543_RS18190
AL543_RS18195	PF06965	Na+/H+ antiporter 1
AL543_RS18200	PF07143	Hydroxyneurosporene synthase (CrtC)
AL543_RS18200	PF17186	AL543_RS18200
AL543_RS18205	PF02687	AL543_RS18205
AL543_RS18210	PF00005	ABC transporter
AL543_RS18215	PF01554	MatE
AL543_RS18220	PF11066	AL543_RS18220
AL543_RS18220	PF13460	NADH(P)-binding
AL543_RS18225	PF11140	AL543_RS18225
AL543_RS18230	PF07690	Major Facilitator Superfamily
AL543_RS18235	PF00849	RNA pseudouridylate synthase
AL543_RS18235	PF01479	S4 domain
AL543_RS18240	PF00271	Helicase conserved C-terminal domain
AL543_RS18240	PF04851	Type III restriction enzyme, res subunit
AL543_RS18250	PF00072	Response regulator receiver domain
AL543_RS18250	PF00486	Transcriptional regulatory protein, C terminal
AL543_RS18255	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS18260	PF01386	Ribosomal L25p family
AL543_RS18265	PF14312	AL543_RS18265
AL543_RS18270	PF00563	EAL domain
AL543_RS18305	PF16576	AL543_RS18305
AL543_RS18310	PF00873	AcrB/AcrD/AcrF family
AL543_RS18315	PF12614	AL543_RS18315
AL543_RS18330	PF11301	AL543_RS18330
AL543_RS18335	PF13419	Haloacid dehalogenase-like hydrolase
AL543_RS18345	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL543_RS18345	PF12793	AL543_RS18345
AL543_RS18350	PF06629	AL543_RS18350
AL543_RS18355	PF01752	Collagenase
AL543_RS18355	PF04151	Bacterial pre-peptidase C-terminal domain
AL543_RS18355	PF08453	Peptidase family M9 N-terminal
AL543_RS18360	PF00072	Response regulator receiver domain
AL543_RS18365	PF00072	Response regulator receiver domain
AL543_RS18365	PF00196	Bacterial regulatory proteins, luxR family
AL543_RS18365	PF00563	EAL domain
AL543_RS18370	PF00072	Response regulator receiver domain
AL543_RS18370	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL543_RS18370	PF00512	His Kinase A (phospho-acceptor) domain
AL543_RS18370	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS18375	PF00571	CBS domain
AL543_RS18375	PF01769	Divalent cation transporter
AL543_RS18380	PF00892	EamA-like transporter family
AL543_RS18385	PF03222	Tryptophan/tyrosine permease family
AL543_RS18390	PF13437	HlyD family secretion protein
AL543_RS18395	PF00005	ABC transporter
AL543_RS18400	PF12698	ABC-2 family transporter protein
AL543_RS18410	PF06945	AL543_RS18410
AL543_RS18415	PF03724	META domain
AL543_RS18420	PF13416	Bacterial extracellular solute-binding protein
AL543_RS18425	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS18430	PF00005	ABC transporter
AL543_RS18435	PF01066	CDP-alcohol phosphatidyltransferase
AL543_RS18440	PF00849	RNA pseudouridylate synthase
AL543_RS18445	PF00209	Sodium:neurotransmitter symporter family
AL543_RS18450	PF13091	PLD-like domain
AL543_RS18450	PF13396	AL543_RS18450
AL543_RS18455	PF01053	Cys/Met metabolism PLP-dependent enzyme
AL543_RS18460	PF03352	Methyladenine glycosylase
AL543_RS18465	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AL543_RS18465	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
AL543_RS18470	PF04024	AL543_RS18470
AL543_RS18475	PF06667	AL543_RS18475
AL543_RS18480	PF04012	AL543_RS18480
AL543_RS18485	PF00158	Sigma-54 interaction domain
AL543_RS18485	PF02954	Bacterial regulatory protein, Fis family
AL543_RS18490	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL543_RS18495	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS18500	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS18500	PF12911	AL543_RS18500
AL543_RS18505	PF00005	ABC transporter
AL543_RS18505	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL543_RS18510	PF00005	ABC transporter
AL543_RS18515	PF11150	AL543_RS18515
AL543_RS18520	PF11042	AL543_RS18520
AL543_RS18525	PF01368	DHH family
AL543_RS18525	PF02833	DHHA2 domain
AL543_RS18535	PF11449	AL543_RS18535
AL543_RS18540	PF03193	Protein of unknown function, DUF258
AL543_RS18545	PF02065	Melibiase
AL543_RS18550	PF01797	Transposase IS200 like
AL543_RS18555	PF01797	Transposase IS200 like
AL543_RS18560	PF00384	Molybdopterin oxidoreductase
AL543_RS18560	PF01568	Molydopterin dinucleotide binding domain
AL543_RS18565	PF03264	NapC/NirT cytochrome c family, N-terminal region
AL543_RS18570	PF06796	AL543_RS18570
AL543_RS18575	PF01226	Formate/nitrite transporter
AL543_RS18585	PF06146	AL543_RS18585
AL543_RS18590	PF13460	NADH(P)-binding
AL543_RS18595	PF02698	DUF218 domain
AL543_RS18605	PF00563	EAL domain
AL543_RS18605	PF00990	GGDEF domain
AL543_RS18610	PF04279	AL543_RS18610
AL543_RS18615	PF03061	Thioesterase superfamily
AL543_RS18620	PF03795	YCII-related domain
AL543_RS18625	PF16549	AL543_RS18625
AL543_RS18630	PF01717	Cobalamin-independent synthase, Catalytic domain
AL543_RS18630	PF08267	Cobalamin-independent synthase, N-terminal domain
AL543_RS18635	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS18635	PF03466	LysR substrate binding domain
AL543_RS18640	PF14056	AL543_RS18640
AL543_RS18650	PF00675	Insulinase (Peptidase family M16)
AL543_RS18650	PF05193	Peptidase M16 inactive domain
AL543_RS18655	PF00563	EAL domain
AL543_RS18655	PF13426	PAS domain
AL543_RS18660	PF04055	Radical SAM superfamily
AL543_RS18660	PF08497	AL543_RS18660
AL543_RS18660	PF11842	AL543_RS18660
AL543_RS18665	PF01810	AL543_RS18665
AL543_RS18670	PF01037	AsnC family
AL543_RS18670	PF13412	Winged helix-turn-helix DNA-binding
AL543_RS18675	PF04310	MukB N-terminal
AL543_RS18675	PF13558	Putative exonuclease SbcCD, C subunit
AL543_RS18675	PF16330	AL543_RS18675
AL543_RS18680	PF04288	MukE-like family
AL543_RS18685	PF03882	KicB killing factor
AL543_RS18685	PF17192	AL543_RS18685
AL543_RS18685	PF17193	AL543_RS18685
AL543_RS18690	PF08241	Methyltransferase domain
AL543_RS18695	PF02698	DUF218 domain
AL543_RS18700	PF00072	Response regulator receiver domain
AL543_RS18700	PF00486	Transcriptional regulatory protein, C terminal
AL543_RS18705	PF02613	Nitrate reductase delta subunit
AL543_RS18715	PF00356	Bacterial regulatory proteins, lacI family
AL543_RS18715	PF13377	Periplasmic binding protein-like domain
AL543_RS18720	PF04993	TfoX N-terminal domain
AL543_RS18720	PF04994	TfoX C-terminal domain
AL543_RS18725	PF09335	AL543_RS18725
AL543_RS18730	PF09413	Domain of unknown function (DUF2007)
AL543_RS18735	PF00561	alpha/beta hydrolase fold
AL543_RS18740	PF00534	Glycosyl transferases group 1
AL543_RS18740	PF08323	Starch synthase catalytic domain
AL543_RS18745	PF00483	Nucleotidyl transferase
AL543_RS18750	PF01797	Transposase IS200 like
AL543_RS18755	PF01131	DNA topoisomerase
AL543_RS18755	PF01396	AL543_RS18755
AL543_RS18755	PF01751	Toprim domain
AL543_RS18755	PF08272	Topoisomerase I zinc-ribbon-like
AL543_RS18760	PF10692	Protein of unknown function (DUF2498)
AL543_RS18765	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
AL543_RS18775	PF03588	Leucyl/phenylalanyl-tRNA protein transferase
AL543_RS18780	PF04376	AL543_RS18780
AL543_RS18780	PF04377	AL543_RS18780
AL543_RS18785	PF01176	Translation initiation factor 1A / IF-1
AL543_RS18790	PF07055	Enoyl reductase FAD binding domain
AL543_RS18790	PF12241	Trans-2-enoyl-CoA reductase catalytic region
AL543_RS18790	PF12242	NAD(P)H binding domain of trans-2-enoyl-CoA reductase
AL543_RS18795	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AL543_RS18795	PF02770	Acyl-CoA dehydrogenase, middle domain
AL543_RS18795	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AL543_RS18795	PF09317	AL543_RS18795
AL543_RS18800	PF00440	Bacterial regulatory proteins, tetR family
AL543_RS18810	PF07383	AL543_RS18810
AL543_RS18815	PF00171	Aldehyde dehydrogenase family
AL543_RS18820	PF00440	Bacterial regulatory proteins, tetR family
AL543_RS18820	PF14246	AefR-like transcriptional repressor, C-terminal region
AL543_RS18825	PF16576	AL543_RS18825
AL543_RS18830	PF00873	AcrB/AcrD/AcrF family
AL543_RS18835	PF13358	DDE superfamily endonuclease
AL543_RS18835	PF13384	Homeodomain-like domain
AL543_RS18835	PF13592	AL543_RS18835
AL543_RS18840	PF00563	EAL domain
AL543_RS18845	PF03575	Peptidase family S51
AL543_RS18850	PF01546	Peptidase family M20/M25/M40
AL543_RS18855	PF03606	AL543_RS18855
AL543_RS18860	PF01380	SIS domain
AL543_RS18860	PF01418	Helix-turn-helix domain, rpiR family
AL543_RS18865	PF13360	PQQ-like domain
AL543_RS18875	PF07719	Tetratricopeptide repeat
AL543_RS18875	PF13181	Tetratricopeptide repeat
AL543_RS18875	PF13432	Tetratricopeptide repeat
AL543_RS18880	PF00482	Type II secretion system (T2SS), protein F
AL543_RS18885	PF00482	Type II secretion system (T2SS), protein F
AL543_RS18890	PF00437	Type II/IV secretion system protein
AL543_RS18900	PF07811	AL543_RS18900
AL543_RS18905	PF07811	AL543_RS18905
AL543_RS18910	PF13400	AL543_RS18910
AL543_RS18920	PF00263	AL543_RS18920
AL543_RS18920	PF13629	AL543_RS18920
AL543_RS18925	PF08666	SAF domain
AL543_RS18925	PF16976	AL543_RS18925
AL543_RS18935	PF01478	Type IV leader peptidase family
AL543_RS18950	PF12833	Helix-turn-helix domain
AL543_RS18955	PF01055	Glycosyl hydrolases family 31
AL543_RS18955	PF16338	AL543_RS18955
AL543_RS18955	PF17137	AL543_RS18955
AL543_RS18960	PF13229	Right handed beta helix region
AL543_RS18965	PF04055	Radical SAM superfamily
AL543_RS18965	PF13186	Iron-sulfur cluster-binding domain
AL543_RS18970	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS18970	PF03466	LysR substrate binding domain
AL543_RS18975	PF03401	Tripartite tricarboxylate transporter family receptor
AL543_RS18980	PF07331	AL543_RS18980
AL543_RS18985	PF01970	AL543_RS18985
AL543_RS18990	PF00884	Sulfatase
AL543_RS19000	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL543_RS19005	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL543_RS19010	PF07971	Glycosyl hydrolase family 92
AL543_RS19020	PF07971	Glycosyl hydrolase family 92
AL543_RS19025	PF07971	Glycosyl hydrolase family 92
AL543_RS19030	PF07971	Glycosyl hydrolase family 92
AL543_RS19035	PF07971	Glycosyl hydrolase family 92
AL543_RS19040	PF00892	EamA-like transporter family
AL543_RS19045	PF00155	Aminotransferase class I and II
AL543_RS19045	PF00392	Bacterial regulatory proteins, gntR family
AL543_RS19050	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL543_RS19050	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL543_RS19050	PF02378	Phosphotransferase system, EIIC
AL543_RS19055	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL543_RS19060	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL543_RS19065	PF12833	Helix-turn-helix domain
AL543_RS19070	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL543_RS19070	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL543_RS19070	PF02378	Phosphotransferase system, EIIC
AL543_RS19075	PF01238	Phosphomannose isomerase type I
AL543_RS19080	PF06610	AL543_RS19080
AL543_RS19085	PF00072	Response regulator receiver domain
AL543_RS19085	PF00512	His Kinase A (phospho-acceptor) domain
AL543_RS19085	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS19090	PF03695	Uncharacterised protein family (UPF0149)
AL543_RS19095	PF02445	Quinolinate synthetase A protein
AL543_RS19100	PF13174	Tetratricopeptide repeat
AL543_RS19100	PF13432	Tetratricopeptide repeat
AL543_RS19100	PF16331	AL543_RS19100
AL543_RS19105	PF00691	OmpA family
AL543_RS19110	PF04052	TolB amino-terminal domain
AL543_RS19110	PF07676	WD40-like Beta Propeller Repeat
AL543_RS19115	PF06519	TolA C-terminal
AL543_RS19120	PF02472	Biopolymer transport protein ExbD/TolR
AL543_RS19125	PF01618	AL543_RS19125
AL543_RS19130	PF03061	Thioesterase superfamily
AL543_RS19135	PF09600	AL543_RS19135
AL543_RS19140	PF08173	AL543_RS19140
AL543_RS19145	PF02322	AL543_RS19145
AL543_RS19150	PF01654	AL543_RS19150
AL543_RS19155	PF05491	Holliday junction DNA helicase ruvB C-terminus
AL543_RS19155	PF05496	Holliday junction DNA helicase ruvB N-terminus
AL543_RS19160	PF01330	RuvA N terminal domain
AL543_RS19160	PF07499	RuvA, C-terminal domain
AL543_RS19160	PF14520	Helix-hairpin-helix domain
AL543_RS19165	PF02075	Crossover junction endodeoxyribonuclease RuvC
AL543_RS19170	PF01406	tRNA synthetases class I (C) catalytic domain
AL543_RS19170	PF09190	DALR domain
AL543_RS19175	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
AL543_RS19180	PF00149	Calcineurin-like phosphoesterase
AL543_RS19185	PF00563	EAL domain
AL543_RS19185	PF08668	HDOD domain
AL543_RS19190	PF02810	SEC-C motif
AL543_RS19195	PF09829	AL543_RS19195
AL543_RS19200	PF13609	Gram-negative porin
AL543_RS19210	PF06733	DEAD_2
AL543_RS19210	PF13307	Helicase C-terminal domain
AL543_RS19215	PF01925	AL543_RS19215
AL543_RS19220	PF07445	Primosomal replication protein priB and priC
AL543_RS19225	PF10689	AL543_RS19225
AL543_RS19230	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS19230	PF00672	HAMP domain
AL543_RS19235	PF03372	Endonuclease/Exonuclease/phosphatase family
AL543_RS19240	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS19245	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS19250	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL543_RS19255	PF00005	ABC transporter
AL543_RS19260	PF11840	AL543_RS19260
AL543_RS19265	PF01228	Glycine radical
AL543_RS19265	PF02901	Pyruvate formate lyase
AL543_RS19270	PF09982	Uncharacterized protein conserved in bacteria (DUF2219)
AL543_RS19275	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS19280	PF04055	Radical SAM superfamily
AL543_RS19280	PF13353	4Fe-4S single cluster domain
AL543_RS19285	PF01891	Cobalt uptake substrate-specific transmembrane region
AL543_RS19290	PF03887	YfbU domain
AL543_RS19295	PF06798	AL543_RS19295
AL543_RS19295	PF08298	PrkA AAA domain
AL543_RS19300	PF04285	AL543_RS19300
AL543_RS19305	PF04293	AL543_RS19305
AL543_RS19310	PF00367	phosphotransferase system, EIIB
AL543_RS19310	PF02378	Phosphotransferase system, EIIC
AL543_RS19315	PF00072	Response regulator receiver domain
AL543_RS19315	PF00486	Transcriptional regulatory protein, C terminal
AL543_RS19320	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS19325	PF01547	Bacterial extracellular solute-binding protein
AL543_RS19330	PF01609	Transposase DDE domain
AL543_RS19330	PF13006	AL543_RS19330
AL543_RS19335	PF02348	Cytidylyltransferase
AL543_RS19340	PF03966	Trm112p-like protein
AL543_RS19345	PF02606	Tetraacyldisaccharide-1-P 4'-kinase
AL543_RS19350	PF00005	ABC transporter
AL543_RS19350	PF00664	ABC transporter transmembrane region
AL543_RS19355	PF00753	Metallo-beta-lactamase superfamily
AL543_RS19355	PF03772	AL543_RS19355
AL543_RS19355	PF13567	AL543_RS19355
AL543_RS19360	PF09835	AL543_RS19360
AL543_RS19365	PF02687	AL543_RS19365
AL543_RS19365	PF12704	MacB-like periplasmic core domain
AL543_RS19370	PF00005	ABC transporter
AL543_RS19375	PF02687	AL543_RS19375
AL543_RS19375	PF12704	MacB-like periplasmic core domain
AL543_RS19385	PF00270	DEAD/DEAH box helicase
AL543_RS19385	PF00271	Helicase conserved C-terminal domain
AL543_RS19385	PF02559	CarD-like/TRCF domain
AL543_RS19385	PF03461	TRCF domain
AL543_RS19390	PF10972	AL543_RS19390
AL543_RS19395	PF13302	Acetyltransferase (GNAT) domain
AL543_RS19400	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL543_RS19405	PF05728	Uncharacterised protein family (UPF0227)
AL543_RS19410	PF01636	Phosphotransferase enzyme family
AL543_RS19415	PF13036	Protein of unknown function (DUF3897)
AL543_RS19420	PF07233	Protein of unknown function (DUF1425)
AL543_RS19430	PF01230	HIT domain
AL543_RS19435	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS19440	PF09002	Domain of unknown function (DUF1887)
AL543_RS19445	PF00392	Bacterial regulatory proteins, gntR family
AL543_RS19445	PF07840	FadR C-terminal domain
AL543_RS19450	PF06450	AL543_RS19450
AL543_RS19455	PF02600	Disulfide bond formation protein DsbB
AL543_RS19460	PF01580	FtsK/SpoIIIE family
AL543_RS19460	PF09397	Ftsk gamma domain
AL543_RS19460	PF13491	AL543_RS19460
AL543_RS19465	PF01037	AsnC family
AL543_RS19465	PF13412	Winged helix-turn-helix DNA-binding
AL543_RS19470	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
AL543_RS19470	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
AL543_RS19475	PF13679	AL543_RS19475
AL543_RS19480	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS19480	PF03466	LysR substrate binding domain
AL543_RS19490	PF06175	tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)
AL543_RS19495	PF01797	Transposase IS200 like
AL543_RS19500	PF16313	AL543_RS19500
AL543_RS19510	PF00005	ABC transporter
AL543_RS19515	PF00005	ABC transporter
AL543_RS19515	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL543_RS19520	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL543_RS19525	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS19530	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS19535	PF16130	AL543_RS19535
AL543_RS19545	PF03372	Endonuclease/Exonuclease/phosphatase family
AL543_RS19550	PF01740	STAS domain
AL543_RS19555	PF00691	OmpA family
AL543_RS19560	PF02563	Polysaccharide biosynthesis/export protein
AL543_RS19560	PF10531	SLBB domain
AL543_RS19570	PF01627	Hpt domain
AL543_RS19575	PF00072	Response regulator receiver domain
AL543_RS19575	PF00158	Sigma-54 interaction domain
AL543_RS19575	PF02954	Bacterial regulatory protein, Fis family
AL543_RS19580	PF00534	Glycosyl transferases group 1
AL543_RS19580	PF13579	Glycosyl transferase 4-like domain
AL543_RS19585	PF00534	Glycosyl transferases group 1
AL543_RS19585	PF13439	Glycosyltransferase Family 4
AL543_RS19590	PF00534	Glycosyl transferases group 1
AL543_RS19595	PF01943	AL543_RS19595
AL543_RS19600	PF04932	AL543_RS19600
AL543_RS19605	PF00132	Bacterial transferase hexapeptide (six repeats)
AL543_RS19610	PF13692	Glycosyl transferases group 1
AL543_RS19615	PF02706	Chain length determinant protein
AL543_RS19620	PF00534	Glycosyl transferases group 1
AL543_RS19620	PF13439	Glycosyltransferase Family 4
AL543_RS19625	PF13641	Glycosyltransferase like family 2
AL543_RS19630	PF02397	AL543_RS19630
AL543_RS19635	PF07700	Heme NO binding
AL543_RS19640	PF00072	Response regulator receiver domain
AL543_RS19640	PF00512	His Kinase A (phospho-acceptor) domain
AL543_RS19640	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS19645	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
AL543_RS19650	PF13176	Tetratricopeptide repeat
AL543_RS19650	PF13181	Tetratricopeptide repeat
AL543_RS19655	PF06305	AL543_RS19655
AL543_RS19660	PF00216	Bacterial DNA-binding protein
AL543_RS19665	PF00575	S1 RNA binding domain
AL543_RS19670	PF02224	Cytidylate kinase
AL543_RS19675	PF12836	Helix-hairpin-helix motif
AL543_RS19685	PF13616	PPIC-type PPIASE domain
AL543_RS19685	PF13624	SurA N-terminal domain
AL543_RS19690	PF00216	Bacterial DNA-binding protein
AL543_RS19695	PF00004	ATPase family associated with various cellular activities (AAA)
AL543_RS19695	PF02190	ATP-dependent protease La (LON) domain
AL543_RS19695	PF05362	Lon protease (S16) C-terminal proteolytic domain
AL543_RS19700	PF06689	ClpX C4-type zinc finger
AL543_RS19700	PF07724	AAA domain (Cdc48 subfamily)
AL543_RS19700	PF10431	C-terminal, D2-small domain, of ClpB protein
AL543_RS19705	PF00574	Clp protease
AL543_RS19710	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AL543_RS19710	PF05697	Bacterial trigger factor protein (TF)
AL543_RS19710	PF05698	Bacterial trigger factor protein (TF) C-terminus
AL543_RS19720	PF00512	His Kinase A (phospho-acceptor) domain
AL543_RS19720	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS19720	PF02743	Cache domain
AL543_RS19725	PF00072	Response regulator receiver domain
AL543_RS19725	PF00158	Sigma-54 interaction domain
AL543_RS19725	PF02954	Bacterial regulatory protein, Fis family
AL543_RS19730	PF06808	AL543_RS19730
AL543_RS19735	PF04290	AL543_RS19735
AL543_RS19740	PF03480	Bacterial extracellular solute-binding protein, family 7
AL543_RS19745	PF02696	AL543_RS19745
AL543_RS19760	PF00563	EAL domain
AL543_RS19760	PF00990	GGDEF domain
AL543_RS19765	PF01066	CDP-alcohol phosphatidyltransferase
AL543_RS19770	PF01148	Cytidylyltransferase family
AL543_RS19775	PF01553	Acyltransferase
AL543_RS19780	PF13279	Thioesterase-like superfamily
AL543_RS19785	PF01569	PAP2 superfamily
AL543_RS19790	PF01810	AL543_RS19790
AL543_RS19795	PF12710	haloacid dehalogenase-like hydrolase
AL543_RS19800	PF00005	ABC transporter
AL543_RS19800	PF08402	TOBE domain
AL543_RS19805	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS19810	PF00528	Binding-protein-dependent transport system inner membrane component
AL543_RS19815	PF01663	Type I phosphodiesterase / nucleotide pyrophosphatase
AL543_RS19820	PF13343	Bacterial extracellular solute-binding protein
AL543_RS19830	PF01609	Transposase DDE domain
AL543_RS19830	PF13340	AL543_RS19830
AL543_RS19840	PF10129	AL543_RS19840
AL543_RS19855	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
AL543_RS19855	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
AL543_RS19865	PF00704	Glycosyl hydrolases family 18
AL543_RS19870	PF01773	Na+ dependent nucleoside transporter N-terminus
AL543_RS19870	PF07662	Na+ dependent nucleoside transporter C-terminus
AL543_RS19870	PF07670	Nucleoside recognition
AL543_RS19875	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS19875	PF03466	LysR substrate binding domain
AL543_RS19880	PF13406	Transglycosylase SLT domain
AL543_RS19885	PF05166	YcgL domain
AL543_RS19890	PF03775	Septum formation inhibitor MinC, C-terminal domain
AL543_RS19890	PF05209	Septum formation inhibitor MinC, N-terminal domain
AL543_RS19895	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
AL543_RS19900	PF03776	Septum formation topological specificity factor MinE
AL543_RS19905	PF04170	NlpE N-terminal domain
AL543_RS19910	PF06844	Protein of unknown function (DUF1244)
AL543_RS19915	PF04280	Tim44-like domain
AL543_RS19915	PF07466	AL543_RS19915
AL543_RS19920	PF13305	WHG domain
AL543_RS19925	PF01553	Acyltransferase
AL543_RS19925	PF07690	Major Facilitator Superfamily
AL543_RS19930	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS19935	PF01381	Helix-turn-helix
AL543_RS19935	PF07883	Cupin domain
AL543_RS19940	PF03594	AL543_RS19940
AL543_RS19945	PF00501	AMP-binding enzyme
AL543_RS19945	PF13193	AMP-binding enzyme C-terminal domain
AL543_RS19950	PF13378	Enolase C-terminal domain-like
AL543_RS19955	PF00378	Enoyl-CoA hydratase/isomerase family
AL543_RS19960	PF12697	Alpha/beta hydrolase family
AL543_RS19965	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AL543_RS19965	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AL543_RS19965	PF16582	AL543_RS19965
AL543_RS19970	PF00425	chorismate binding enzyme
AL543_RS19975	PF00155	Aminotransferase class I and II
AL543_RS19980	PF13023	HD domain
AL543_RS19985	PF01966	HD domain
AL543_RS19985	PF13286	Phosphohydrolase-associated domain
AL543_RS19990	PF03942	AL543_RS19990
AL543_RS19995	PF01694	Rhomboid family
AL543_RS20000	PF01432	Peptidase family M3
AL543_RS20005	PF00570	HRDC domain
AL543_RS20005	PF01612	3'-5' exonuclease
AL543_RS20010	PF00501	AMP-binding enzyme
AL543_RS20010	PF13193	AMP-binding enzyme C-terminal domain
AL543_RS20015	PF00561	alpha/beta hydrolase fold
AL543_RS20020	PF03843	AL543_RS20020
AL543_RS20030	PF00814	Glycoprotease family
AL543_RS20035	PF13307	Helicase C-terminal domain
AL543_RS20045	PF00551	Formyl transferase
AL543_RS20045	PF01842	ACT domain
AL543_RS20050	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
AL543_RS20050	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL543_RS20055	PF01343	Peptidase family S49
AL543_RS20060	PF00710	Asparaginase
AL543_RS20065	PF07023	AL543_RS20065
AL543_RS20070	PF11207	AL543_RS20070
AL543_RS20075	PF01641	SelR domain
AL543_RS20080	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AL543_RS20080	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
AL543_RS20085	PF01263	Aldose 1-epimerase
AL543_RS20090	PF11059	AL543_RS20090
AL543_RS20095	PF13649	Methyltransferase domain
AL543_RS20100	PF04187	Protein of unknown function, DUF399
AL543_RS20110	PF13467	Ribbon-helix-helix domain
AL543_RS20115	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL543_RS20120	PF03992	Antibiotic biosynthesis monooxygenase
AL543_RS20125	PF00072	Response regulator receiver domain
AL543_RS20125	PF01584	CheW-like domain
AL543_RS20130	PF00480	ROK family
AL543_RS20135	PF00224	Pyruvate kinase, barrel domain
AL543_RS20135	PF02887	Pyruvate kinase, alpha/beta domain
AL543_RS20140	PF01734	Patatin-like phospholipase
AL543_RS20150	PF01389	OmpA-like transmembrane domain
AL543_RS20155	PF00209	Sodium:neurotransmitter symporter family
AL543_RS20170	PF00367	phosphotransferase system, EIIB
AL543_RS20170	PF02378	Phosphotransferase system, EIIC
AL543_RS20175	PF01026	TatD related DNase
AL543_RS20180	PF09115	DNA polymerase III, delta subunit, C terminal
AL543_RS20180	PF13177	DNA polymerase III, delta subunit
AL543_RS20185	PF02223	Thymidylate kinase
AL543_RS20190	PF02618	YceG-like family
AL543_RS20195	PF01063	Aminotransferase class IV
AL543_RS20200	PF00109	Beta-ketoacyl synthase, N-terminal domain
AL543_RS20200	PF02801	Beta-ketoacyl synthase, C-terminal domain
AL543_RS20205	PF00550	Phosphopantetheine attachment site
AL543_RS20210	PF13561	Enoyl-(Acyl carrier protein) reductase
AL543_RS20215	PF00698	Acyl transferase domain
AL543_RS20220	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
AL543_RS20220	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
AL543_RS20225	PF02504	Fatty acid synthesis protein
AL543_RS20230	PF01783	Ribosomal L32p protein family
AL543_RS20235	PF02620	AL543_RS20235
AL543_RS20240	PF02545	Maf-like protein
AL543_RS20245	PF00849	RNA pseudouridylate synthase
AL543_RS20245	PF01479	S4 domain
AL543_RS20260	PF00575	S1 RNA binding domain
AL543_RS20260	PF10150	Ribonuclease E/G family
AL543_RS20265	PF00916	AL543_RS20265
AL543_RS20265	PF01740	STAS domain
AL543_RS20275	PF01609	Transposase DDE domain
AL543_RS20275	PF13006	AL543_RS20275
AL543_RS20280	PF00171	Aldehyde dehydrogenase family
AL543_RS20280	PF00465	Iron-containing alcohol dehydrogenase
AL543_RS20285	PF01914	AL543_RS20285
AL543_RS20290	PF00520	Ion transport protein
AL543_RS20295	PF01118	Semialdehyde dehydrogenase, NAD binding domain
AL543_RS20295	PF02774	Semialdehyde dehydrogenase, dimerisation domain
AL543_RS20300	PF03553	AL543_RS20300
AL543_RS20305	PF01627	Hpt domain
AL543_RS20310	PF04245	AL543_RS20310
AL543_RS20315	PF07208	Protein of unknown function (DUF1414)
AL543_RS20320	PF00884	Sulfatase
AL543_RS20320	PF11893	AL543_RS20320
AL543_RS20340	PF13358	DDE superfamily endonuclease
AL543_RS20340	PF13551	Winged helix-turn helix
AL543_RS20340	PF13592	AL543_RS20340
AL543_RS20350	PF00106	short chain dehydrogenase
AL543_RS20365	PF00850	Histone deacetylase domain
AL543_RS20370	PF01131	DNA topoisomerase
AL543_RS20370	PF01751	Toprim domain
AL543_RS20375	PF00462	Glutaredoxin
AL543_RS20380	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
AL543_RS20380	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
AL543_RS20385	PF11993	AL543_RS20385
AL543_RS20390	PF00106	short chain dehydrogenase
AL543_RS20395	PF04333	AL543_RS20395
AL543_RS20400	PF14559	Tetratricopeptide repeat
AL543_RS20405	PF03918	Cytochrome C biogenesis protein
AL543_RS20410	PF08534	Redoxin
AL543_RS20415	PF01578	AL543_RS20415
AL543_RS20415	PF16327	AL543_RS20415
AL543_RS20420	PF03100	CcmE
AL543_RS20425	PF04995	AL543_RS20425
AL543_RS20430	PF01578	AL543_RS20430
AL543_RS20435	PF03379	AL543_RS20435
AL543_RS20440	PF00005	ABC transporter
AL543_RS20445	PF10975	AL543_RS20445
AL543_RS20450	PF01584	CheW-like domain
AL543_RS20455	PF01584	CheW-like domain
AL543_RS20460	PF13614	AAA domain
AL543_RS20465	PF00072	Response regulator receiver domain
AL543_RS20465	PF01339	CheB methylesterase
AL543_RS20470	PF01584	CheW-like domain
AL543_RS20470	PF01627	Hpt domain
AL543_RS20470	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS20470	PF02895	Signal transducing histidine kinase, homodimeric domain
AL543_RS20475	PF04344	Chemotaxis phosphatase, CheZ
AL543_RS20480	PF00072	Response regulator receiver domain
AL543_RS20485	PF04539	Sigma-70 region 3
AL543_RS20485	PF04542	Sigma-70 region 2
AL543_RS20485	PF04545	Sigma-70, region 4
AL543_RS20490	PF10609	ParA/MinD ATPase like
AL543_RS20495	PF00448	SRP54-type protein, GTPase domain
AL543_RS20500	PF00771	FHIPEP family
AL543_RS20505	PF00300	Histidine phosphatase superfamily (branch 1)
AL543_RS20510	PF00675	Insulinase (Peptidase family M16)
AL543_RS20510	PF05193	Peptidase M16 inactive domain
AL543_RS20510	PF16187	AL543_RS20510
AL543_RS20515	PF06185	YecM protein
AL543_RS20520	PF00750	tRNA synthetases class I (R)
AL543_RS20520	PF03485	Arginyl tRNA synthetase N terminal domain
AL543_RS20520	PF05746	DALR anticodon binding domain
AL543_RS20525	PF01230	HIT domain
AL543_RS20530	PF09012	FeoC like transcriptional regulator
AL543_RS20535	PF02421	Ferrous iron transport protein B
AL543_RS20535	PF07664	AL543_RS20535
AL543_RS20535	PF07670	Nucleoside recognition
AL543_RS20540	PF04023	FeoA domain
AL543_RS20545	PF12833	Helix-turn-helix domain
AL543_RS20550	PF01297	Periplasmic solute binding protein family
AL543_RS20555	PF00005	ABC transporter
AL543_RS20560	PF00950	AL543_RS20560
AL543_RS20565	PF00549	CoA-ligase
AL543_RS20565	PF02629	CoA binding domain
AL543_RS20570	PF00549	CoA-ligase
AL543_RS20570	PF08442	ATP-grasp domain
AL543_RS20575	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
AL543_RS20575	PF00364	Biotin-requiring enzyme
AL543_RS20575	PF02817	e3 binding domain
AL543_RS20580	PF00676	Dehydrogenase E1 component
AL543_RS20580	PF02779	Transketolase, pyrimidine binding domain
AL543_RS20580	PF16078	AL543_RS20580
AL543_RS20580	PF16870	AL543_RS20580
AL543_RS20585	PF13085	2Fe-2S iron-sulfur cluster binding domain
AL543_RS20585	PF13534	4Fe-4S dicluster domain
AL543_RS20590	PF00890	FAD binding domain
AL543_RS20590	PF02910	Fumarate reductase flavoprotein C-term
AL543_RS20595	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
AL543_RS20600	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
AL543_RS20605	PF00285	Citrate synthase
AL543_RS20610	PF01784	NIF3 (NGG1p interacting factor 3)
AL543_RS20615	PF08907	AL543_RS20615
AL543_RS20620	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
AL543_RS20620	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
AL543_RS20620	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
AL543_RS20620	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
AL543_RS20625	PF03925	SeqA protein
AL543_RS20625	PF17206	AL543_RS20625
AL543_RS20630	PF12697	Alpha/beta hydrolase family
AL543_RS20635	PF10981	AL543_RS20635
AL543_RS20640	PF00258	Flavodoxin
AL543_RS20645	PF04172	AL543_RS20645
AL543_RS20650	PF03788	AL543_RS20650
AL543_RS20655	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL543_RS20655	PF03466	LysR substrate binding domain
AL543_RS20660	PF14539	Domain of unknown function (DUF4442)
AL543_RS20665	PF01475	Ferric uptake regulator family
AL543_RS20670	PF01118	Semialdehyde dehydrogenase, NAD binding domain
AL543_RS20670	PF02774	Semialdehyde dehydrogenase, dimerisation domain
AL543_RS20675	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AL543_RS20675	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL543_RS20675	PF11890	Domain of unknown function (DUF3410)
AL543_RS20680	PF00109	Beta-ketoacyl synthase, N-terminal domain
AL543_RS20680	PF02801	Beta-ketoacyl synthase, C-terminal domain
AL543_RS20685	PF01266	FAD dependent oxidoreductase
AL543_RS20685	PF05430	S-adenosyl-L-methionine-dependent methyltransferase
AL543_RS20690	PF03358	NADPH-dependent FMN reductase
AL543_RS20695	PF08891	AL543_RS20695
AL543_RS20700	PF04315	AL543_RS20700
AL543_RS20705	PF03458	AL543_RS20705
AL543_RS20710	PF01264	Chorismate synthase
AL543_RS20720	PF05175	Methyltransferase small domain
AL543_RS20725	PF01713	Smr domain
AL543_RS20730	PF01312	FlhB HrpN YscU SpaS Family
AL543_RS20735	PF01311	AL543_RS20735
AL543_RS20740	PF01313	AL543_RS20740
AL543_RS20745	PF00813	AL543_RS20745
AL543_RS20750	PF04347	AL543_RS20750
AL543_RS20755	PF01052	Surface presentation of antigens (SPOA)
AL543_RS20760	PF01052	Surface presentation of antigens (SPOA)
AL543_RS20760	PF02154	Flagellar motor switch protein FliM
AL543_RS20765	PF03748	AL543_RS20765
AL543_RS20770	PF02120	Flagellar hook-length control protein FliK
AL543_RS20775	PF02050	Flagellar FliJ protein
AL543_RS20780	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AL543_RS20785	PF02108	AL543_RS20785
AL543_RS20790	PF01706	FliG C-terminal domain
AL543_RS20790	PF14841	FliG middle domain
AL543_RS20790	PF14842	FliG N-terminal domain
AL543_RS20795	PF01514	Secretory protein of YscJ/FliF family
AL543_RS20795	PF08345	AL543_RS20795
AL543_RS20800	PF02049	AL543_RS20800
AL543_RS20805	PF00072	Response regulator receiver domain
AL543_RS20805	PF00158	Sigma-54 interaction domain
AL543_RS20805	PF02954	Bacterial regulatory protein, Fis family
AL543_RS20810	PF00512	His Kinase A (phospho-acceptor) domain
AL543_RS20810	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL543_RS20810	PF13188	PAS domain
AL543_RS20815	PF00158	Sigma-54 interaction domain
AL543_RS20815	PF02954	Bacterial regulatory protein, Fis family
AL543_RS20815	PF06490	AL543_RS20815
AL543_RS20820	PF02561	Flagellar protein FliS
AL543_RS20830	PF02465	AL543_RS20830
AL543_RS20830	PF07195	AL543_RS20830
AL543_RS20830	PF07196	Flagellin hook IN motif
AL543_RS20835	PF03646	FlaG protein
AL543_RS20840	PF00669	Bacterial flagellin N-terminal helical region
AL543_RS20840	PF00700	Bacterial flagellin C-terminal helical region
AL543_RS20840	PF07196	Flagellin hook IN motif
AL543_RS20845	PF00669	Bacterial flagellin N-terminal helical region
AL543_RS20845	PF00700	Bacterial flagellin C-terminal helical region
AL543_RS20845	PF07196	Flagellin hook IN motif
AL543_RS20850	PF00669	Bacterial flagellin N-terminal helical region
AL543_RS20850	PF00700	Bacterial flagellin C-terminal helical region
AL543_RS20850	PF07196	Flagellin hook IN motif
AL543_RS20855	PF04261	Dyp-type peroxidase family
AL543_RS20860	PF11143	AL543_RS20860
AL543_RS20865	PF11169	AL543_RS20865
AL543_RS20870	PF09904	Winged helix-turn helix
AL543_RS20875	PF03960	ArsC family
AL543_RS20880	PF01546	Peptidase family M20/M25/M40
AL543_RS20880	PF07687	Peptidase dimerisation domain
AL543_RS20885	PF02557	D-alanyl-D-alanine carboxypeptidase
AL543_RS20890	PF11446	AL543_RS20890
AL543_RS20895	PF06804	NlpB/DapX lipoprotein
AL543_RS20900	PF00701	Dihydrodipicolinate synthetase family
AL543_RS20905	PF13740	ACT domain
AL543_RS20910	PF00578	AhpC/TSA family
AL543_RS20915	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL543_RS20915	PF00672	HAMP domain
AL543_RS20915	PF02743	Cache domain
AL543_RS20920	PF01594	AL543_RS20920
AL543_RS20925	PF01206	Sulfurtransferase TusA
AL543_RS20930	PF01435	Peptidase family M48
AL543_RS20930	PF14559	Tetratricopeptide repeat
AL543_RS20935	PF03960	ArsC family
AL543_RS20940	PF03358	NADPH-dependent FMN reductase
AL543_RS20945	PF09842	AL543_RS20945
AL543_RS20950	PF09839	AL543_RS20950
AL543_RS20955	PF00860	Permease family
AL543_RS20960	PF04073	Aminoacyl-tRNA editing domain
AL543_RS20965	PF00149	Calcineurin-like phosphoesterase
AL543_RS20965	PF02872	5'-nucleotidase, C-terminal domain
AL543_RS20970	PF00793	DAHP synthetase I family
AL543_RS20975	PF13369	AL543_RS20975
AL543_RS20975	PF13371	Tetratricopeptide repeat
AL543_RS20980	PF04247	AL543_RS20980
AL543_RS20985	PF13847	Methyltransferase domain
AL543_RS20990	PF00472	RF-1 domain
AL543_RS20990	PF03462	PCRF domain
AL543_RS20995	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
AL543_RS20995	PF01488	Shikimate / quinate 5-dehydrogenase
AL543_RS20995	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
AL543_RS21000	PF03550	Outer membrane lipoprotein LolB
AL543_RS21005	PF00288	GHMP kinases N terminal domain
AL543_RS21005	PF08544	GHMP kinases C terminal
AL543_RS21010	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
AL543_RS21010	PF14572	Phosphoribosyl synthetase-associated domain
AL543_RS21015	PF01195	Peptidyl-tRNA hydrolase
AL543_RS21020	PF01926	50S ribosome-binding GTPase
AL543_RS21020	PF06071	Protein of unknown function (DUF933)
AL543_RS21105	PF00669	Bacterial flagellin N-terminal helical region
AL543_RS21105	PF00700	Bacterial flagellin C-terminal helical region
AL543_RS21105	PF07196	Flagellin hook IN motif
AL543_RS21115	PF00669	Bacterial flagellin N-terminal helical region
AL543_RS21115	PF00700	Bacterial flagellin C-terminal helical region
AL543_RS21115	PF07196	Flagellin hook IN motif
AL543_RS21120	PF00669	Bacterial flagellin N-terminal helical region
AL543_RS21125	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AL543_RS21130	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
AL543_RS21130	PF10135	AL543_RS21130
AL543_RS21135	PF02119	AL543_RS21135
AL543_RS21140	PF02107	AL543_RS21140
AL543_RS21145	PF00460	Flagella basal body rod protein
AL543_RS21145	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AL543_RS21150	PF00460	Flagella basal body rod protein
AL543_RS21150	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AL543_RS21155	PF00460	Flagella basal body rod protein
AL543_RS21155	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AL543_RS21155	PF07559	Flagellar basal body protein FlaE
AL543_RS21160	PF03963	AL543_RS21160
AL543_RS21160	PF13860	FlgD Ig-like domain
AL543_RS21160	PF13861	FlgD Tudor-like domain
AL543_RS21165	PF00460	Flagella basal body rod protein
AL543_RS21165	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AL543_RS21180	PF01739	CheR methyltransferase, SAM binding domain
AL543_RS21180	PF03705	CheR methyltransferase, all-alpha domain
AL543_RS21185	PF00072	Response regulator receiver domain
AL543_RS21185	PF01584	CheW-like domain
AL543_RS21190	PF13144	SAF-like
AL543_RS21195	PF04316	Anti-sigma-28 factor, FlgM
AL543_RS21200	PF05130	FlgN protein
AL543_RS21205	PF02169	LPP20 lipoprotein
AL543_RS21215	PF16538	AL543_RS21215
AL543_RS21215	PF16539	AL543_RS21215
AL543_RS21215	PF16548	AL543_RS21215
AL543_RS21230	PF00691	OmpA family
AL543_RS21230	PF01389	OmpA-like transmembrane domain
AL543_RS21235	PF00749	tRNA synthetases class I (E and Q), catalytic domain
AL543_RS21240	PF00122	E1-E2 ATPase
AL543_RS21240	PF00403	Heavy-metal-associated domain
AL543_RS21240	PF00702	haloacid dehalogenase-like hydrolase
AL543_RS21245	PF04214	AL543_RS21245
AL543_RS21250	PF00728	Glycosyl hydrolase family 20, catalytic domain
AL543_RS21250	PF02838	Glycosyl hydrolase family 20, domain 2
AL543_RS21250	PF03173	Putative carbohydrate binding domain
AL543_RS21250	PF03174	Chitobiase/beta-hexosaminidase C-terminal domain
AL543_RS21255	PF01963	AL543_RS21255
AL543_RS21265	PF11346	AL543_RS21265
AL543_RS21270	PF01713	Smr domain
AL543_RS21275	PF00849	RNA pseudouridylate synthase
AL543_RS21275	PF01479	S4 domain
AL543_RS21280	PF14681	Uracil phosphoribosyltransferase
AL543_RS21285	PF00586	AIR synthase related protein, N-terminal domain
AL543_RS21285	PF02769	AIR synthase related protein, C-terminal domain
AL543_RS21290	PF00551	Formyl transferase
AL543_RS21295	PF13230	Glutamine amidotransferases class-II
AL543_RS21300	PF13580	SIS domain
AL543_RS21305	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AL543_RS21305	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AL543_RS21305	PF09317	AL543_RS21305
AL543_RS21310	PF08173	AL543_RS21310
AL543_RS21315	PF02322	AL543_RS21315
AL543_RS21320	PF01654	AL543_RS21320
AL543_RS21325	PF07681	AL543_RS21325
AL543_RS21330	PF09836	Uncharacterized protein conserved in bacteria (DUF2063)
AL543_RS21335	PF05114	Protein of unknown function (DUF692)
AL543_RS21345	PF12706	Beta-lactamase superfamily domain
AL543_RS21355	PF00929	Exonuclease
AL543_RS21360	PF00075	RNase H
AL543_RS21365	PF08241	Methyltransferase domain
AL543_RS21370	PF00753	Metallo-beta-lactamase superfamily
AL543_RS21370	PF16123	AL543_RS21370
AL543_RS21375	PF01464	Transglycosylase SLT domain
AL543_RS21375	PF01476	LysM domain
AL543_RS21380	PF03372	Endonuclease/Exonuclease/phosphatase family
AL543_RS21385	PF00543	Nitrogen regulatory protein P-II
AL543_RS21390	PF00034	Cytochrome c
AL543_RS21395	PF01171	PP-loop family
AL543_RS21395	PF09179	TilS substrate binding domain
AL543_RS21395	PF11734	TilS substrate C-terminal domain
AL543_RS21400	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit