vm_RS00005 SM00382 ATPases associated with a variety of cellular activities vm_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain vm_RS00010 SM00480 DNA polymerase III beta subunit vm_RS00020 SM00387 Histidine kinase-like ATPases vm_RS00020 SM00433 TopoisomeraseII vm_RS00080 SM00829 Enoylreductase vm_RS00110 SM00382 ATPases associated with a variety of cellular activities vm_RS00115 SM00563 Phosphate acyltransferases vm_RS00185 SM00257 Lysin motif vm_RS00210 SM01001 AIR carboxylase vm_RS00310 SM00876 Biotin and Thiamin Synthesis associated domain vm_RS00335 SM00344 helix_turn_helix ASNC type vm_RS00340 SM00052 Putative diguanylate phosphodiesterase vm_RS00340 SM00091 PAS domain vm_RS00340 SM00267 diguanylate cyclase vm_RS00385 SM00091 PAS domain vm_RS00385 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vm_RS00445 SM00563 Phosphate acyltransferases vm_RS00475 SM00450 Rhodanese Homology Domain vm_RS00490 SM01004 Delta-aminolevulinic acid dehydratase vm_RS00500 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs vm_RS00500 SM00474 3'-5' exonuclease vm_RS00500 SM00475 5'-3' exonuclease vm_RS00500 SM00482 DNA polymerase A domain vm_RS00535 SM00729 Elongator protein 3, MiaB family, Radical SAM vm_RS00570 SM01219 vm_RS00570 vm_RS00605 SM00052 Putative diguanylate phosphodiesterase vm_RS00605 SM00267 diguanylate cyclase vm_RS00605 SM00897 FIST N domain vm_RS00605 SM01204 vm_RS00605 vm_RS00610 SM01144 vm_RS00610 vm_RS00680 SM00382 ATPases associated with a variety of cellular activities vm_RS00680 SM00962 SRP54-type protein, GTPase domain vm_RS00680 SM00963 SRP54-type protein, helical bundle domain vm_RS00685 SM00382 ATPases associated with a variety of cellular activities vm_RS00740 SM00360 RNA recognition motif vm_RS00805 SM00052 Putative diguanylate phosphodiesterase vm_RS00805 SM00267 diguanylate cyclase vm_RS00810 SM00382 ATPases associated with a variety of cellular activities vm_RS00810 SM00448 cheY-homologous receiver domain vm_RS00815 SM00091 PAS domain vm_RS00815 SM00387 Histidine kinase-like ATPases vm_RS00815 SM00388 His Kinase A (phosphoacceptor) domain vm_RS00825 SM01230 vm_RS00825 vm_RS00875 SM00363 S4 RNA-binding domain vm_RS00890 SM00382 ATPases associated with a variety of cellular activities vm_RS00970 SM00316 Ribosomal protein S1-like RNA-binding domain vm_RS00970 SM00732 Likely ribonuclease with RNase H fold. vm_RS01035 SM00974 vm_RS01035 vm_RS01060 SM00530 Helix-turn-helix XRE-family like proteins vm_RS01070 SM00487 DEAD-like helicases superfamily vm_RS01105 SM00421 helix_turn_helix, Lux Regulon vm_RS01115 SM00382 ATPases associated with a variety of cellular activities vm_RS01130 SM00495 Chitin-binding domain type 3 vm_RS01135 SM00448 cheY-homologous receiver domain vm_RS01135 SM00862 Transcriptional regulatory protein, C terminal vm_RS01140 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vm_RS01140 SM00387 Histidine kinase-like ATPases vm_RS01140 SM00388 His Kinase A (phosphoacceptor) domain vm_RS01150 SM00487 DEAD-like helicases superfamily vm_RS01150 SM00490 helicase superfamily c-terminal domain vm_RS01155 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. vm_RS01155 SM00954 Region found in RelA / SpoT proteins vm_RS01160 SM01409 vm_RS01160 vm_RS01165 SM00072 Guanylate kinase homologues. vm_RS01465 SM01091 Transporter associated domain vm_RS01470 SM00421 helix_turn_helix, Lux Regulon vm_RS01470 SM00448 cheY-homologous receiver domain vm_RS01505 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vm_RS01505 SM00387 Histidine kinase-like ATPases vm_RS01505 SM00388 His Kinase A (phosphoacceptor) domain vm_RS01510 SM00448 cheY-homologous receiver domain vm_RS01510 SM00862 Transcriptional regulatory protein, C terminal vm_RS01560 SM00919 Malic enzyme, NAD binding domain vm_RS01560 SM01274 vm_RS01560 vm_RS01570 SM00487 DEAD-like helicases superfamily vm_RS01570 SM00490 helicase superfamily c-terminal domain vm_RS01575 SM00354 helix_turn _helix lactose operon repressor vm_RS01590 SM00382 ATPases associated with a variety of cellular activities vm_RS01590 SM01086 C-terminal, D2-small domain, of ClpB protein vm_RS01635 SM00883 Chaperonin 10 Kd subunit vm_RS01655 SM00841 Elongation factor P, C-terminal vm_RS01655 SM01185 vm_RS01655 vm_RS01685 SM00450 Rhodanese Homology Domain vm_RS01700 SM00971 Serine acetyltransferase, N-terminal vm_RS01720 SM00859 Semialdehyde dehydrogenase, NAD binding domain vm_RS01785 SM00965 Secretin and TonB N terminus short domain vm_RS01835 SM00729 Elongator protein 3, MiaB family, Radical SAM vm_RS01865 SM01150 vm_RS01865 vm_RS01870 SM00100 Cyclic nucleotide-monophosphate binding domain vm_RS01870 SM00419 helix_turn_helix, cAMP Regulatory protein vm_RS01895 SM00382 ATPases associated with a variety of cellular activities vm_RS01925 SM00788 Adenylosuccinate synthetase vm_RS01930 SM00671 Sel1-like repeats. vm_RS01940 SM00316 Ribosomal protein S1-like RNA-binding domain vm_RS01940 SM00357 Cold shock protein domain vm_RS01940 SM00955 vm_RS01940 vm_RS01945 SM00967 RNA 2'-O ribose methyltransferase substrate binding vm_RS01950 SM01403 vm_RS01950 vm_RS01970 SM01382 vm_RS01970 vm_RS01970 SM01383 vm_RS01970 vm_RS01985 SM00322 K homology RNA-binding domain vm_RS02005 SM01374 vm_RS02005 vm_RS02010 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. vm_RS02075 SM00363 S4 RNA-binding domain vm_RS02075 SM01390 vm_RS02075 vm_RS02080 SM00662 RNA polymerases D vm_RS02115 SM00487 DEAD-like helicases superfamily vm_RS02115 SM00490 helicase superfamily c-terminal domain vm_RS02165 SM00382 ATPases associated with a variety of cellular activities vm_RS02250 SM00382 ATPases associated with a variety of cellular activities vm_RS02265 SM00924 MgtE intracellular N domain vm_RS02295 SM00382 ATPases associated with a variety of cellular activities vm_RS02315 SM00116 Domain in cystathionine beta-synthase and other proteins. vm_RS02330 SM00382 ATPases associated with a variety of cellular activities vm_RS02365 SM00563 Phosphate acyltransferases vm_RS02390 SM00670 Large family of predicted nucleotide-binding domains vm_RS02400 SM00487 DEAD-like helicases superfamily vm_RS02400 SM00490 helicase superfamily c-terminal domain vm_RS02460 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. vm_RS02510 SM01329 vm_RS02510 vm_RS02515 SM00917 LeuA allosteric (dimerisation) domain vm_RS02525 SM00014 Acid phosphatase homologues vm_RS02655 SM00358 Double-stranded RNA binding motif vm_RS02655 SM00535 Ribonuclease III family vm_RS02695 SM00073 Histidine Phosphotransfer domain vm_RS02695 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vm_RS02695 SM00387 Histidine kinase-like ATPases vm_RS02695 SM00388 His Kinase A (phosphoacceptor) domain vm_RS02695 SM00448 cheY-homologous receiver domain vm_RS02705 SM00954 Region found in RelA / SpoT proteins vm_RS02725 SM01192 vm_RS02725 vm_RS02725 SM01193 vm_RS02725 vm_RS02750 SM00382 ATPases associated with a variety of cellular activities vm_RS02760 SM00287 Bacterial SH3 domain homologues vm_RS02775 SM00880 vm_RS02775 vm_RS02775 SM01118 vm_RS02775 vm_RS02785 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vm_RS02785 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vm_RS02825 SM00387 Histidine kinase-like ATPases vm_RS02825 SM00433 TopoisomeraseII vm_RS02830 SM00434 DNA Topoisomerase IV vm_RS02875 SM00644 vm_RS02875 vm_RS02900 SM01131 vm_RS02900 vm_RS02910 SM00345 helix_turn_helix gluconate operon transcriptional repressor vm_RS02910 SM00895 vm_RS02910 vm_RS02990 SM00842 Cell division protein FtsA vm_RS02995 SM00864 Tubulin/FtsZ family, GTPase domain vm_RS02995 SM00865 Tubulin/FtsZ family, C-terminal domain vm_RS03010 SM00957 SecA DEAD-like domain vm_RS03010 SM00958 SecA preprotein cross-linking domain vm_RS03025 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain vm_RS03030 SM00851 MGS-like domain vm_RS03030 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain vm_RS03090 SM00729 Elongator protein 3, MiaB family, Radical SAM vm_RS03095 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) vm_RS03095 SM00091 PAS domain vm_RS03095 SM00267 diguanylate cyclase vm_RS03100 SM00073 Histidine Phosphotransfer domain vm_RS03100 SM00091 PAS domain vm_RS03100 SM00387 Histidine kinase-like ATPases vm_RS03100 SM00388 His Kinase A (phosphoacceptor) domain vm_RS03100 SM00448 cheY-homologous receiver domain vm_RS03105 SM00448 cheY-homologous receiver domain vm_RS03105 SM00862 Transcriptional regulatory protein, C terminal vm_RS03145 SM00518 AP endonuclease family 2 vm_RS03150 SM00986 Uracil DNA glycosylase superfamily vm_RS03150 SM00987 UreE urease accessory protein, C-terminal domain vm_RS03195 SM01133 vm_RS03195 vm_RS03200 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain vm_RS03230 SM00382 ATPases associated with a variety of cellular activities vm_RS03235 SM00838 Elongation factor G C-terminus vm_RS03235 SM00889 Elongation factor G, domain IV vm_RS03265 SM01038 Beta galactosidase small chain vm_RS03270 SM00354 helix_turn _helix lactose operon repressor vm_RS03365 SM00925 MltA specific insert domain vm_RS03400 SM00464 Found in ATP-dependent protease La (LON) vm_RS03450 SM00900 vm_RS03450 vm_RS03540 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase vm_RS03595 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. vm_RS03640 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. vm_RS03650 SM00935 Outer membrane protein (OmpH-like) vm_RS03680 SM00481 DNA polymerase alpha chain like domain vm_RS03690 SM00977 TilS substrate C-terminal domain vm_RS03700 SM00938 Nitrogen regulatory protein P-II vm_RS03710 SM00257 Lysin motif vm_RS03715 SM00849 Metallo-beta-lactamase superfamily vm_RS03730 SM00479 vm_RS03730 vm_RS03770 SM00363 S4 RNA-binding domain vm_RS03775 SM00463 Small MutS-related domain vm_RS03795 SM01081 Putative carbohydrate binding domain vm_RS03855 SM00858 vm_RS03855 vm_RS03860 SM00260 Two component signalling adaptor domain vm_RS03860 SM00448 cheY-homologous receiver domain vm_RS03865 SM00138 Methyltransferase, chemotaxis proteins vm_RS03910 SM00047 Lysozyme subfamily 2 vm_RS04025 SM01400 vm_RS04025 vm_RS04045 SM00937 vm_RS04045 vm_RS04105 SM00028 Tetratricopeptide repeats vm_RS04120 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vm_RS04120 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vm_RS04180 SM01130 vm_RS04180 vm_RS04265 SM00382 ATPases associated with a variety of cellular activities vm_RS04270 SM00091 PAS domain vm_RS04270 SM00387 Histidine kinase-like ATPases vm_RS04270 SM00388 His Kinase A (phosphoacceptor) domain vm_RS04275 SM00382 ATPases associated with a variety of cellular activities vm_RS04275 SM00448 cheY-homologous receiver domain vm_RS04300 SM00382 ATPases associated with a variety of cellular activities vm_RS04355 SM00463 Small MutS-related domain vm_RS04400 SM00825 Beta-ketoacyl synthase vm_RS04410 SM00859 Semialdehyde dehydrogenase, NAD binding domain vm_RS04505 SM00861 Transketolase, pyrimidine binding domain vm_RS04520 SM00881 CoA binding domain vm_RS04530 SM00382 ATPases associated with a variety of cellular activities vm_RS04540 SM00342 helix_turn_helix, arabinose operon control protein vm_RS04545 SM00899 vm_RS04545 vm_RS04570 SM00836 DALR anticodon binding domain vm_RS04570 SM01016 Arginyl tRNA synthetase N terminal dom vm_RS04585 SM00855 Phosphoglycerate mutase family vm_RS04595 SM00382 ATPases associated with a variety of cellular activities vm_RS04595 SM00962 SRP54-type protein, GTPase domain vm_RS04610 SM00448 cheY-homologous receiver domain vm_RS04620 SM00073 Histidine Phosphotransfer domain vm_RS04620 SM00260 Two component signalling adaptor domain vm_RS04620 SM00387 Histidine kinase-like ATPases vm_RS04620 SM01231 vm_RS04620 vm_RS04625 SM00448 cheY-homologous receiver domain vm_RS04635 SM00260 Two component signalling adaptor domain vm_RS04640 SM00260 Two component signalling adaptor domain vm_RS04650 SM00382 ATPases associated with a variety of cellular activities vm_RS04720 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain vm_RS04720 SM00437 Bacterial DNA topoisomerase I DNA-binding domain vm_RS04720 SM00493 vm_RS04720 vm_RS04730 SM00342 helix_turn_helix, arabinose operon control protein vm_RS04785 SM00859 Semialdehyde dehydrogenase, NAD binding domain vm_RS04815 SM00316 Ribosomal protein S1-like RNA-binding domain vm_RS04825 SM00363 S4 RNA-binding domain vm_RS04855 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. vm_RS04860 SM00822 vm_RS04860 vm_RS04870 SM00825 Beta-ketoacyl synthase vm_RS04935 SM00260 Two component signalling adaptor domain vm_RS04935 SM00448 cheY-homologous receiver domain vm_RS04980 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain vm_RS05000 SM00870 vm_RS05000 vm_RS05025 SM00487 DEAD-like helicases superfamily vm_RS05025 SM00491 vm_RS05025 vm_RS05055 SM00474 3'-5' exonuclease vm_RS05070 SM01144 vm_RS05070 vm_RS05075 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. vm_RS05080 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. vm_RS05110 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain vm_RS05125 SM00530 Helix-turn-helix XRE-family like proteins vm_RS05130 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vm_RS05130 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vm_RS05135 SM00563 Phosphate acyltransferases vm_RS05145 SM00978 vm_RS05145 vm_RS05195 SM00495 Chitin-binding domain type 3 vm_RS05195 SM00636 vm_RS05195 vm_RS05225 SM00014 Acid phosphatase homologues vm_RS05230 SM00495 Chitin-binding domain type 3 vm_RS05240 SM00563 Phosphate acyltransferases vm_RS05255 SM00052 Putative diguanylate phosphodiesterase vm_RS05255 SM00267 diguanylate cyclase vm_RS05290 SM00382 ATPases associated with a variety of cellular activities vm_RS05290 SM00448 cheY-homologous receiver domain vm_RS05295 SM00387 Histidine kinase-like ATPases vm_RS05295 SM00388 His Kinase A (phosphoacceptor) domain vm_RS05315 SM00382 ATPases associated with a variety of cellular activities vm_RS05315 SM00994 ClpX C4-type zinc finger vm_RS05315 SM01086 C-terminal, D2-small domain, of ClpB protein vm_RS05320 SM00382 ATPases associated with a variety of cellular activities vm_RS05320 SM00464 Found in ATP-dependent protease La (LON) vm_RS05325 SM00411 bacterial (prokaryotic) histone like domain vm_RS05335 SM00278 Helix-hairpin-helix DNA-binding motif class 1 vm_RS05340 SM01321 vm_RS05340 vm_RS05350 SM00316 Ribosomal protein S1-like RNA-binding domain vm_RS05355 SM00411 bacterial (prokaryotic) histone like domain vm_RS05365 SM00028 Tetratricopeptide repeats vm_RS05370 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family vm_RS05375 SM00387 Histidine kinase-like ATPases vm_RS05375 SM00388 His Kinase A (phosphoacceptor) domain vm_RS05375 SM00448 cheY-homologous receiver domain vm_RS05440 SM00382 ATPases associated with a variety of cellular activities vm_RS05440 SM00448 cheY-homologous receiver domain vm_RS05500 SM00382 ATPases associated with a variety of cellular activities vm_RS05505 SM00382 ATPases associated with a variety of cellular activities vm_RS05540 SM01002 Alanine dehydrogenase/PNT, C-terminal domain vm_RS05540 SM01003 Alanine dehydrogenase/PNT, N-terminal domain vm_RS05545 SM00344 helix_turn_helix ASNC type vm_RS05550 SM00843 vm_RS05550 vm_RS05565 SM00345 helix_turn_helix gluconate operon transcriptional repressor vm_RS05625 SM00487 DEAD-like helicases superfamily vm_RS05625 SM00490 helicase superfamily c-terminal domain vm_RS05625 SM00982 vm_RS05625 vm_RS05625 SM01058 CarD-like/TRCF domain vm_RS05640 SM00382 ATPases associated with a variety of cellular activities vm_RS05655 SM00849 Metallo-beta-lactamase superfamily vm_RS05660 SM00382 ATPases associated with a variety of cellular activities vm_RS05685 SM00387 Histidine kinase-like ATPases vm_RS05690 SM00448 cheY-homologous receiver domain vm_RS05690 SM00862 Transcriptional regulatory protein, C terminal vm_RS05710 SM00763 PrkA AAA domain vm_RS05730 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vm_RS05730 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vm_RS05750 SM00382 ATPases associated with a variety of cellular activities vm_RS05755 SM00062 Bacterial periplasmic substrate-binding proteins vm_RS05755 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. vm_RS05775 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vm_RS05775 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vm_RS05795 SM00491 vm_RS05795 vm_RS05810 SM00052 Putative diguanylate phosphodiesterase vm_RS05825 SM00840 vm_RS05825 vm_RS05835 SM00278 Helix-hairpin-helix DNA-binding motif class 1 vm_RS05840 SM00382 ATPases associated with a variety of cellular activities vm_RS05895 SM00028 Tetratricopeptide repeats vm_RS05910 SM00387 Histidine kinase-like ATPases vm_RS05910 SM00388 His Kinase A (phosphoacceptor) domain vm_RS05910 SM00448 cheY-homologous receiver domain vm_RS05930 SM00342 helix_turn_helix, arabinose operon control protein vm_RS05950 SM00345 helix_turn_helix gluconate operon transcriptional repressor vm_RS06010 SM00954 Region found in RelA / SpoT proteins vm_RS06050 SM00470 ParB-like nuclease domain vm_RS06060 SM00635 Bacterial Ig-like domain 2 vm_RS06095 SM00710 Parallel beta-helix repeats vm_RS06105 SM00342 helix_turn_helix, arabinose operon control protein vm_RS06130 SM00858 vm_RS06130 vm_RS06180 SM00028 Tetratricopeptide repeats vm_RS06220 SM00052 Putative diguanylate phosphodiesterase vm_RS06270 SM00316 Ribosomal protein S1-like RNA-binding domain vm_RS06300 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain vm_RS06300 SM00437 Bacterial DNA topoisomerase I DNA-binding domain vm_RS06300 SM00493 vm_RS06300 vm_RS06335 SM00354 helix_turn _helix lactose operon repressor vm_RS06345 SM00448 cheY-homologous receiver domain vm_RS06345 SM00862 Transcriptional regulatory protein, C terminal vm_RS06380 SM00344 helix_turn_helix ASNC type vm_RS06390 SM00729 Elongator protein 3, MiaB family, Radical SAM vm_RS06395 SM00052 Putative diguanylate phosphodiesterase vm_RS06395 SM00091 PAS domain vm_RS06445 SM00052 Putative diguanylate phosphodiesterase vm_RS06445 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. vm_RS06445 SM00267 diguanylate cyclase vm_RS06515 SM01131 vm_RS06515 vm_RS06530 SM00382 ATPases associated with a variety of cellular activities vm_RS06535 SM00382 ATPases associated with a variety of cellular activities vm_RS06555 SM00382 ATPases associated with a variety of cellular activities vm_RS06575 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase vm_RS06590 SM00155 Phospholipase D. Active site motifs. vm_RS06610 SM00382 ATPases associated with a variety of cellular activities vm_RS06645 SM00382 ATPases associated with a variety of cellular activities vm_RS06665 SM00116 Domain in cystathionine beta-synthase and other proteins. vm_RS06670 SM00062 Bacterial periplasmic substrate-binding proteins vm_RS06670 SM00387 Histidine kinase-like ATPases vm_RS06670 SM00388 His Kinase A (phosphoacceptor) domain vm_RS06670 SM00448 cheY-homologous receiver domain vm_RS06675 SM00052 Putative diguanylate phosphodiesterase vm_RS06675 SM00421 helix_turn_helix, Lux Regulon vm_RS06675 SM00448 cheY-homologous receiver domain vm_RS06680 SM00448 cheY-homologous receiver domain vm_RS06715 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vm_RS06715 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vm_RS06745 SM00191 Integrin alpha (beta-propellor repeats). vm_RS06755 SM00387 Histidine kinase-like ATPases vm_RS06760 SM00448 cheY-homologous receiver domain vm_RS06760 SM00862 Transcriptional regulatory protein, C terminal vm_RS06770 SM00487 DEAD-like helicases superfamily vm_RS06770 SM00490 helicase superfamily c-terminal domain vm_RS06775 SM00363 S4 RNA-binding domain vm_RS06800 SM00382 ATPases associated with a variety of cellular activities vm_RS06820 SM01321 vm_RS06820 vm_RS06895 SM00028 Tetratricopeptide repeats vm_RS06895 SM00386 HAT (Half-A-TPR) repeats vm_RS06935 SM00387 Histidine kinase-like ATPases vm_RS06940 SM00448 cheY-homologous receiver domain vm_RS06950 SM00260 Two component signalling adaptor domain vm_RS06950 SM00448 cheY-homologous receiver domain vm_RS06965 SM00267 diguanylate cyclase vm_RS07000 SM00812 Alpha-L-fucosidase vm_RS07005 SM01276 vm_RS07005 vm_RS07015 SM01060 vm_RS07015 vm_RS07020 SM00248 ankyrin repeats vm_RS07030 SM01022 vm_RS07030 vm_RS07070 SM00382 ATPases associated with a variety of cellular activities vm_RS07110 SM00382 ATPases associated with a variety of cellular activities vm_RS07135 SM00849 Metallo-beta-lactamase superfamily vm_RS07155 SM00354 helix_turn _helix lactose operon repressor vm_RS07175 SM00420 helix_turn_helix, Deoxyribose operon repressor vm_RS07175 SM01134 vm_RS07175 vm_RS07180 SM00382 ATPases associated with a variety of cellular activities vm_RS07270 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vm_RS07280 SM01144 vm_RS07280 vm_RS07295 SM00852 Probable molybdopterin binding domain vm_RS07305 SM00382 ATPases associated with a variety of cellular activities vm_RS07320 SM00382 ATPases associated with a variety of cellular activities vm_RS07320 SM00448 cheY-homologous receiver domain vm_RS07325 SM00387 Histidine kinase-like ATPases vm_RS07325 SM00388 His Kinase A (phosphoacceptor) domain vm_RS07330 SM00382 ATPases associated with a variety of cellular activities vm_RS07335 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vm_RS07335 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vm_RS07370 SM00926 Molybdopterin oxidoreductase Fe4S4 domain vm_RS07420 SM00316 Ribosomal protein S1-like RNA-binding domain vm_RS07440 SM00382 ATPases associated with a variety of cellular activities vm_RS07450 SM00945 ProQ/FINO family vm_RS07455 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. vm_RS07455 SM00245 tail specific protease vm_RS07490 SM00981 vm_RS07490 vm_RS07500 SM00382 ATPases associated with a variety of cellular activities vm_RS07540 SM00387 Histidine kinase-like ATPases vm_RS07540 SM00388 His Kinase A (phosphoacceptor) domain vm_RS07540 SM00448 cheY-homologous receiver domain vm_RS07545 SM00897 FIST N domain vm_RS07545 SM01204 vm_RS07545 vm_RS07595 SM00100 Cyclic nucleotide-monophosphate binding domain vm_RS07595 SM00419 helix_turn_helix, cAMP Regulatory protein vm_RS07625 SM00382 ATPases associated with a variety of cellular activities vm_RS07655 SM00421 helix_turn_helix, Lux Regulon vm_RS07655 SM00448 cheY-homologous receiver domain vm_RS07660 SM00897 FIST N domain vm_RS07660 SM01204 vm_RS07660 vm_RS07665 SM00387 Histidine kinase-like ATPases vm_RS07665 SM00388 His Kinase A (phosphoacceptor) domain vm_RS07665 SM00448 cheY-homologous receiver domain vm_RS07670 SM00267 diguanylate cyclase vm_RS07730 SM00342 helix_turn_helix, arabinose operon control protein vm_RS07795 SM00347 helix_turn_helix multiple antibiotic resistance protein vm_RS07800 SM00903 Flavin reductase like domain vm_RS07850 SM00342 helix_turn_helix, arabinose operon control protein vm_RS07855 SM00487 DEAD-like helicases superfamily vm_RS07855 SM00490 helicase superfamily c-terminal domain vm_RS07860 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) vm_RS07860 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vm_RS07865 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vm_RS07865 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vm_RS07925 SM00382 ATPases associated with a variety of cellular activities vm_RS07925 SM00487 DEAD-like helicases superfamily vm_RS07925 SM00490 helicase superfamily c-terminal domain vm_RS07925 SM00847 Helicase associated domain (HA2) Add an annotation vm_RS07950 SM00479 vm_RS07950 vm_RS07955 SM00267 diguanylate cyclase vm_RS07955 SM01079 vm_RS07955 vm_RS07975 SM00267 diguanylate cyclase vm_RS07985 SM00267 diguanylate cyclase vm_RS08000 SM00028 Tetratricopeptide repeats vm_RS08000 SM00267 diguanylate cyclase vm_RS08025 SM00062 Bacterial periplasmic substrate-binding proteins vm_RS08040 SM00382 ATPases associated with a variety of cellular activities vm_RS08060 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vm_RS08065 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase vm_RS08070 SM00267 diguanylate cyclase vm_RS08080 SM00073 Histidine Phosphotransfer domain vm_RS08080 SM00091 PAS domain vm_RS08080 SM00387 Histidine kinase-like ATPases vm_RS08080 SM00388 His Kinase A (phosphoacceptor) domain vm_RS08080 SM00448 cheY-homologous receiver domain vm_RS08085 SM00448 cheY-homologous receiver domain vm_RS08085 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. vm_RS08150 SM00345 helix_turn_helix gluconate operon transcriptional repressor vm_RS08150 SM00895 vm_RS08150 vm_RS08155 SM00062 Bacterial periplasmic substrate-binding proteins vm_RS08155 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. vm_RS08175 SM00267 diguanylate cyclase vm_RS08175 SM01079 vm_RS08175 vm_RS08185 SM00382 ATPases associated with a variety of cellular activities vm_RS08215 SM00448 cheY-homologous receiver domain vm_RS08215 SM00862 Transcriptional regulatory protein, C terminal vm_RS08220 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vm_RS08220 SM00387 Histidine kinase-like ATPases vm_RS08220 SM00388 His Kinase A (phosphoacceptor) domain vm_RS08235 SM00448 cheY-homologous receiver domain vm_RS08240 SM00387 Histidine kinase-like ATPases vm_RS08250 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vm_RS08250 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vm_RS08255 SM01005 Alanine racemase, C-terminal domain vm_RS08285 SM00091 PAS domain vm_RS08285 SM00382 ATPases associated with a variety of cellular activities vm_RS08335 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vm_RS08335 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vm_RS08355 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vm_RS08355 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. vm_RS08365 SM00100 Cyclic nucleotide-monophosphate binding domain vm_RS08365 SM00116 Domain in cystathionine beta-synthase and other proteins. vm_RS08370 SM00479 vm_RS08370 vm_RS08375 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vm_RS08375 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vm_RS08390 SM00354 helix_turn _helix lactose operon repressor vm_RS08420 SM00495 Chitin-binding domain type 3 vm_RS08430 SM00347 helix_turn_helix multiple antibiotic resistance protein vm_RS08435 SM00421 helix_turn_helix, Lux Regulon vm_RS08435 SM00448 cheY-homologous receiver domain vm_RS08440 SM00387 Histidine kinase-like ATPases vm_RS08440 SM01049 vm_RS08440 vm_RS08470 SM00849 Metallo-beta-lactamase superfamily vm_RS08525 SM00342 helix_turn_helix, arabinose operon control protein vm_RS08530 SM00450 Rhodanese Homology Domain vm_RS08535 SM00357 Cold shock protein domain vm_RS08585 SM00434 DNA Topoisomerase IV vm_RS08615 SM00852 Probable molybdopterin binding domain vm_RS08630 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vm_RS08630 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vm_RS08630 SM01049 vm_RS08630 vm_RS08645 SM00382 ATPases associated with a variety of cellular activities vm_RS08660 SM00855 Phosphoglycerate mutase family vm_RS08690 SM00479 vm_RS08690 vm_RS08735 SM00411 bacterial (prokaryotic) histone like domain vm_RS08740 SM00873 B3/4 domain vm_RS08740 SM00874 tRNA synthetase B5 domain vm_RS08740 SM00896 Ferredoxin-fold anticodon binding domain vm_RS08785 SM00278 Helix-hairpin-helix DNA-binding motif class 1 vm_RS08785 SM00465 GIY-YIG type nucleases (URI domain) vm_RS08790 SM00421 helix_turn_helix, Lux Regulon vm_RS08790 SM00448 cheY-homologous receiver domain vm_RS08795 SM00486 DNA polymerase type-B family vm_RS08800 SM00052 Putative diguanylate phosphodiesterase vm_RS08810 SM00841 Elongation factor P, C-terminal vm_RS08810 SM01185 vm_RS08810 vm_RS08825 SM00345 helix_turn_helix gluconate operon transcriptional repressor vm_RS08825 SM00866 vm_RS08825 vm_RS08855 SM00020 Trypsin-like serine protease vm_RS08885 SM00671 Sel1-like repeats. vm_RS08910 SM00919 Malic enzyme, NAD binding domain vm_RS08910 SM01274 vm_RS08910 vm_RS08925 SM00267 diguanylate cyclase vm_RS08945 SM00382 ATPases associated with a variety of cellular activities vm_RS08950 SM00382 ATPases associated with a variety of cellular activities vm_RS08955 SM00363 S4 RNA-binding domain vm_RS08965 SM00481 DNA polymerase alpha chain like domain vm_RS09010 SM01321 vm_RS09010 vm_RS09065 SM00100 Cyclic nucleotide-monophosphate binding domain vm_RS09065 SM00387 Histidine kinase-like ATPases vm_RS09070 SM00448 cheY-homologous receiver domain vm_RS09135 SM00382 ATPases associated with a variety of cellular activities vm_RS09135 SM01086 C-terminal, D2-small domain, of ClpB protein vm_RS09145 SM00357 Cold shock protein domain vm_RS09150 SM01321 vm_RS09150 vm_RS09210 SM00528 Domain in histone-like proteins of HNS family vm_RS09295 SM00729 Elongator protein 3, MiaB family, Radical SAM vm_RS09295 SM00876 Biotin and Thiamin Synthesis associated domain vm_RS09310 SM00382 ATPases associated with a variety of cellular activities vm_RS09330 SM00267 diguanylate cyclase vm_RS09335 SM00382 ATPases associated with a variety of cellular activities vm_RS09375 SM00382 ATPases associated with a variety of cellular activities vm_RS09380 SM00382 ATPases associated with a variety of cellular activities vm_RS09405 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vm_RS09405 SM00387 Histidine kinase-like ATPases vm_RS09410 SM00448 cheY-homologous receiver domain vm_RS09415 SM00052 Putative diguanylate phosphodiesterase vm_RS09415 SM00448 cheY-homologous receiver domain vm_RS09420 SM00387 Histidine kinase-like ATPases vm_RS09425 SM00387 Histidine kinase-like ATPases vm_RS09425 SM00388 His Kinase A (phosphoacceptor) domain vm_RS09435 SM00448 cheY-homologous receiver domain vm_RS09440 SM00448 cheY-homologous receiver domain vm_RS09445 SM00073 Histidine Phosphotransfer domain vm_RS09465 SM00342 helix_turn_helix, arabinose operon control protein vm_RS09480 SM00495 Chitin-binding domain type 3 vm_RS09480 SM00636 vm_RS09480 vm_RS09525 SM00420 helix_turn_helix, Deoxyribose operon repressor vm_RS09525 SM01134 vm_RS09525 vm_RS09530 SM00420 helix_turn_helix, Deoxyribose operon repressor vm_RS09530 SM01134 vm_RS09530 vm_RS09545 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain vm_RS09550 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor vm_RS09575 SM00347 helix_turn_helix multiple antibiotic resistance protein vm_RS09590 SM00382 ATPases associated with a variety of cellular activities vm_RS09610 SM01006 Siderophore biosynthesis protein domain vm_RS09635 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vm_RS09645 SM00342 helix_turn_helix, arabinose operon control protein vm_RS09685 SM01022 vm_RS09685 vm_RS09695 SM00974 vm_RS09695 vm_RS09750 SM00530 Helix-turn-helix XRE-family like proteins vm_RS09775 SM00062 Bacterial periplasmic substrate-binding proteins vm_RS09775 SM00267 diguanylate cyclase vm_RS09800 SM00344 helix_turn_helix ASNC type vm_RS09830 SM00493 vm_RS09830 vm_RS09840 SM00382 ATPases associated with a variety of cellular activities vm_RS09860 SM00448 cheY-homologous receiver domain vm_RS09905 SM00226 Low molecular weight phosphatase family vm_RS09950 SM00116 Domain in cystathionine beta-synthase and other proteins. vm_RS09955 SM00267 diguanylate cyclase vm_RS09975 SM00852 Probable molybdopterin binding domain vm_RS09980 SM00729 Elongator protein 3, MiaB family, Radical SAM vm_RS09995 SM00382 ATPases associated with a variety of cellular activities vm_RS09995 SM00448 cheY-homologous receiver domain vm_RS10000 SM00487 DEAD-like helicases superfamily vm_RS10000 SM00490 helicase superfamily c-terminal domain vm_RS10040 SM00327 von Willebrand factor (vWF) type A domain vm_RS10080 SM00900 vm_RS10080 vm_RS10090 SM00478 endonuclease III vm_RS10090 SM00525 vm_RS10090 vm_RS10115 SM00479 vm_RS10115 vm_RS10190 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. vm_RS10210 SM00387 Histidine kinase-like ATPases vm_RS10215 SM00862 Transcriptional regulatory protein, C terminal vm_RS10250 SM00244 prohibitin homologues vm_RS10260 SM00422 helix_turn_helix, mercury resistance vm_RS10275 SM00278 Helix-hairpin-helix DNA-binding motif class 1 vm_RS10275 SM00292 breast cancer carboxy-terminal domain vm_RS10275 SM00532 Ligase N family vm_RS10280 SM00771 ZipA, C-terminal domain (FtsZ-binding) vm_RS10320 SM00729 Elongator protein 3, MiaB family, Radical SAM vm_RS10335 SM00116 Domain in cystathionine beta-synthase and other proteins. vm_RS10335 SM01091 Transporter associated domain vm_RS10390 SM00936 Penicillin-binding protein 5, C-terminal domain vm_RS10405 SM00729 Elongator protein 3, MiaB family, Radical SAM vm_RS10470 SM00710 Parallel beta-helix repeats vm_RS10525 SM00984 UDP binding domain vm_RS10535 SM00226 Low molecular weight phosphatase family vm_RS10580 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vm_RS10580 SM00387 Histidine kinase-like ATPases vm_RS10580 SM00388 His Kinase A (phosphoacceptor) domain vm_RS10585 SM00448 cheY-homologous receiver domain vm_RS10585 SM00862 Transcriptional regulatory protein, C terminal vm_RS10590 SM00642 Alpha-amylase domain vm_RS10600 SM00354 helix_turn _helix lactose operon repressor vm_RS10610 SM00382 ATPases associated with a variety of cellular activities vm_RS10610 SM00930 vm_RS10610 vm_RS10640 SM00028 Tetratricopeptide repeats vm_RS10645 SM00267 diguanylate cyclase vm_RS10655 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs vm_RS10655 SM00475 5'-3' exonuclease vm_RS10675 SM00981 vm_RS10675 vm_RS10700 SM00861 Transketolase, pyrimidine binding domain vm_RS10780 SM01211 vm_RS10780 vm_RS10790 SM00062 Bacterial periplasmic substrate-binding proteins vm_RS10840 SM00271 DnaJ molecular chaperone homology domain vm_RS11175 SM00487 DEAD-like helicases superfamily vm_RS11245 SM00764 Citrate lyase ligase C-terminal domain vm_RS11270 SM00091 PAS domain vm_RS11270 SM00387 Histidine kinase-like ATPases vm_RS11275 SM00448 cheY-homologous receiver domain vm_RS11285 SM00052 Putative diguanylate phosphodiesterase vm_RS11315 SM00849 Metallo-beta-lactamase superfamily vm_RS11330 SM00495 Chitin-binding domain type 3 vm_RS11340 SM00116 Domain in cystathionine beta-synthase and other proteins. vm_RS11340 SM01240 vm_RS11340 vm_RS11365 SM00564 beta-propeller repeat vm_RS11385 SM00530 Helix-turn-helix XRE-family like proteins vm_RS11395 SM00562 vm_RS11395 vm_RS11420 SM00271 DnaJ molecular chaperone homology domain vm_RS11465 SM01323 vm_RS11465 vm_RS11485 SM00116 Domain in cystathionine beta-synthase and other proteins. vm_RS11490 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vm_RS11490 SM01358 vm_RS11490 vm_RS11530 SM00382 ATPases associated with a variety of cellular activities vm_RS11560 SM00091 PAS domain vm_RS11560 SM00387 Histidine kinase-like ATPases vm_RS11560 SM00388 His Kinase A (phosphoacceptor) domain vm_RS11565 SM00448 cheY-homologous receiver domain vm_RS11565 SM00862 Transcriptional regulatory protein, C terminal vm_RS11635 SM00382 ATPases associated with a variety of cellular activities vm_RS11635 SM01086 C-terminal, D2-small domain, of ClpB protein vm_RS11645 SM00363 S4 RNA-binding domain vm_RS11660 SM00830 Chorismate mutase type II vm_RS11670 SM00052 Putative diguanylate phosphodiesterase vm_RS11670 SM00267 diguanylate cyclase vm_RS11690 SM00382 ATPases associated with a variety of cellular activities vm_RS11700 SM00830 Chorismate mutase type II vm_RS11715 SM00448 cheY-homologous receiver domain vm_RS11715 SM00850 LytTr DNA-binding domain vm_RS11770 SM00904 Riboflavin kinase vm_RS11785 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor vm_RS11820 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. vm_RS11830 SM00927 DNA mismatch repair enzyme MutH vm_RS11850 SM00382 ATPases associated with a variety of cellular activities vm_RS11860 SM00937 vm_RS11860 vm_RS11875 SM00487 DEAD-like helicases superfamily vm_RS11875 SM00490 helicase superfamily c-terminal domain vm_RS11885 SM00052 Putative diguanylate phosphodiesterase vm_RS11885 SM00267 diguanylate cyclase vm_RS11910 SM00052 Putative diguanylate phosphodiesterase vm_RS11910 SM00091 PAS domain vm_RS11910 SM00267 diguanylate cyclase vm_RS11930 SM00347 helix_turn_helix multiple antibiotic resistance protein vm_RS11940 SM00028 Tetratricopeptide repeats vm_RS11945 SM00316 Ribosomal protein S1-like RNA-binding domain vm_RS11945 SM00322 K homology RNA-binding domain vm_RS11950 SM01387 vm_RS11950 vm_RS11970 SM00316 Ribosomal protein S1-like RNA-binding domain vm_RS11970 SM00322 K homology RNA-binding domain vm_RS12010 SM00382 ATPases associated with a variety of cellular activities vm_RS12020 SM01103 vm_RS12020 vm_RS12040 SM00363 S4 RNA-binding domain vm_RS12090 SM00091 PAS domain vm_RS12090 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vm_RS12090 SM00387 Histidine kinase-like ATPases vm_RS12090 SM00388 His Kinase A (phosphoacceptor) domain vm_RS12090 SM00448 cheY-homologous receiver domain vm_RS12110 SM00382 ATPases associated with a variety of cellular activities vm_RS12115 SM00382 ATPases associated with a variety of cellular activities vm_RS12135 SM01068 Putative carbohydrate binding domain vm_RS12145 SM00382 ATPases associated with a variety of cellular activities vm_RS12165 SM00938 Nitrogen regulatory protein P-II vm_RS12190 SM00487 DEAD-like helicases superfamily vm_RS12190 SM00490 helicase superfamily c-terminal domain vm_RS12190 SM00847 Helicase associated domain (HA2) Add an annotation vm_RS12235 SM00382 ATPases associated with a variety of cellular activities vm_RS12245 SM00947 Carbonic anhydrase vm_RS12280 SM00749 bacterial OsmY and nodulation domain vm_RS12335 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. vm_RS12340 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. vm_RS12365 SM00382 ATPases associated with a variety of cellular activities vm_RS12365 SM00962 SRP54-type protein, GTPase domain vm_RS12365 SM00963 SRP54-type protein, helical bundle domain vm_RS12375 SM01091 Transporter associated domain vm_RS12400 SM00829 Enoylreductase vm_RS12470 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain vm_RS12480 SM00382 ATPases associated with a variety of cellular activities vm_RS12490 SM00382 ATPases associated with a variety of cellular activities vm_RS12515 SM00533 DNA-binding domain of DNA mismatch repair MUTS family vm_RS12515 SM00534 ATPase domain of DNA mismatch repair MUTS family vm_RS12525 SM00257 Lysin motif vm_RS12570 SM00905 Dihydroneopterin aldolase vm_RS12580 SM01207 vm_RS12580 vm_RS12605 SM00400 zinc finger vm_RS12605 SM00493 vm_RS12605 vm_RS12605 SM00766 DNA primase DnaG DnaB-binding vm_RS12625 SM00954 Region found in RelA / SpoT proteins vm_RS12710 SM00247 Beta/gamma crystallins vm_RS12770 SM00382 ATPases associated with a variety of cellular activities vm_RS12770 SM01086 C-terminal, D2-small domain, of ClpB protein vm_RS12835 SM00342 helix_turn_helix, arabinose operon control protein vm_RS12865 SM00953 vm_RS12865 vm_RS12885 SM00482 DNA polymerase A domain vm_RS12920 SM00563 Phosphate acyltransferases vm_RS12935 SM00420 helix_turn_helix, Deoxyribose operon repressor vm_RS12935 SM01134 vm_RS12935 vm_RS12975 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain vm_RS12990 SM00861 Transketolase, pyrimidine binding domain vm_RS13005 SM00731 SprT homologues. vm_RS13030 SM00732 Likely ribonuclease with RNase H fold. vm_RS13035 SM00363 S4 RNA-binding domain vm_RS13040 SM00421 helix_turn_helix, Lux Regulon vm_RS13070 SM01152 vm_RS13070 vm_RS13085 SM00729 Elongator protein 3, MiaB family, Radical SAM vm_RS13090 SM00478 endonuclease III vm_RS13105 SM00478 endonuclease III vm_RS13105 SM00525 vm_RS13105 vm_RS13140 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vm_RS13140 SM01049 vm_RS13140 vm_RS13170 SM00271 DnaJ molecular chaperone homology domain vm_RS13190 SM00650 Ribosomal RNA adenine dimethylases vm_RS13305 SM01119 vm_RS13305 vm_RS13335 SM00530 Helix-turn-helix XRE-family like proteins vm_RS13350 SM00487 DEAD-like helicases superfamily vm_RS13350 SM00491 vm_RS13350 vm_RS13430 SM00316 Ribosomal protein S1-like RNA-binding domain vm_RS13500 SM00382 ATPases associated with a variety of cellular activities vm_RS13505 SM00028 Tetratricopeptide repeats vm_RS13515 SM00965 Secretin and TonB N terminus short domain vm_RS13535 SM00052 Putative diguanylate phosphodiesterase vm_RS13535 SM00267 diguanylate cyclase vm_RS13545 SM00421 helix_turn_helix, Lux Regulon vm_RS13575 SM01018 B12 binding domain vm_RS13710 SM01005 Alanine racemase, C-terminal domain vm_RS13760 SM00838 Elongation factor G C-terminus vm_RS13760 SM00889 Elongation factor G, domain IV vm_RS13800 SM00320 WD40 repeats vm_RS13815 SM00244 prohibitin homologues vm_RS13820 SM00244 prohibitin homologues vm_RS13840 SM00853 MutL C terminal dimerisation domain vm_RS13840 SM01340 vm_RS13840 vm_RS13845 SM00257 Lysin motif vm_RS13845 SM00646 vm_RS13845 vm_RS13905 SM00479 vm_RS13905 vm_RS13965 SM00663 RNA polymerase I subunit A N-terminus vm_RS13990 SM00649 Ribosomal protein L11/L12 vm_RS13995 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. vm_RS13995 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. vm_RS14055 SM00155 Phospholipase D. Active site motifs. vm_RS14105 SM00357 Cold shock protein domain vm_RS14105 SM00382 ATPases associated with a variety of cellular activities vm_RS14105 SM00959 Rho termination factor, N-terminal domain vm_RS14115 SM00487 DEAD-like helicases superfamily vm_RS14115 SM00490 helicase superfamily c-terminal domain vm_RS14125 SM00387 Histidine kinase-like ATPases vm_RS14125 SM00388 His Kinase A (phosphoacceptor) domain vm_RS14125 SM00448 cheY-homologous receiver domain vm_RS14140 SM00116 Domain in cystathionine beta-synthase and other proteins. vm_RS14145 SM00479 vm_RS14145 vm_RS14165 SM00878 Biotin carboxylase C-terminal domain vm_RS14185 SM00354 helix_turn _helix lactose operon repressor vm_RS14220 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vm_RS14220 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vm_RS14220 SM01049 vm_RS14220 vm_RS14235 SM00862 Transcriptional regulatory protein, C terminal vm_RS14240 SM00422 helix_turn_helix, mercury resistance vm_RS14245 SM00798 AICARFT/IMPCHase bienzyme vm_RS14245 SM00851 MGS-like domain vm_RS14250 SM01209 vm_RS14250 vm_RS14250 SM01210 vm_RS14250 vm_RS14260 SM00411 bacterial (prokaryotic) histone like domain vm_RS14280 SM00986 Uracil DNA glycosylase superfamily vm_RS14280 SM00987 UreE urease accessory protein, C-terminal domain vm_RS14290 SM00849 Metallo-beta-lactamase superfamily vm_RS14290 SM01027 Beta-Casp domain vm_RS14355 SM00984 UDP binding domain vm_RS14455 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain vm_RS14455 SM01232 vm_RS14455 vm_RS14480 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vm_RS14480 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vm_RS14480 SM01049 vm_RS14480 vm_RS14555 SM00382 ATPases associated with a variety of cellular activities vm_RS14575 SM00341 Helicase and RNase D C-terminal vm_RS14575 SM00487 DEAD-like helicases superfamily vm_RS14575 SM00490 helicase superfamily c-terminal domain vm_RS14575 SM00956 vm_RS14575 vm_RS14590 SM00342 helix_turn_helix, arabinose operon control protein vm_RS14645 SM00382 ATPases associated with a variety of cellular activities vm_RS14830 SM00382 ATPases associated with a variety of cellular activities vm_RS14870 SM00470 ParB-like nuclease domain vm_RS14885 SM01228 vm_RS14885 vm_RS14920 SM00857 Resolvase, N terminal domain vm_RS15050 SM01234 vm_RS15050 vm_RS15065 SM00382 ATPases associated with a variety of cellular activities vm_RS15075 SM00062 Bacterial periplasmic substrate-binding proteins vm_RS15075 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. vm_RS15090 SM00480 DNA polymerase III beta subunit vm_RS16260 SM00487 DEAD-like helicases superfamily vm_RS16260 SM00490 helicase superfamily c-terminal domain vm_RS17990 SM00387 Histidine kinase-like ATPases vm_RS18120 SM00838 Elongation factor G C-terminus vm_RS19305 SM01231 vm_RS19305 vm_RS19390 SM00437 Bacterial DNA topoisomerase I DNA-binding domain vm_RS19985 SM00388 His Kinase A (phosphoacceptor) domain vm_RS20435 SM00382 ATPases associated with a variety of cellular activities vm_RS20480 SM00491 vm_RS20480