PN96_RS00040	SM00155	Phospholipase D. Active site motifs.
PN96_RS00095	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
PN96_RS00095	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
PN96_RS00100	SM00649	Ribosomal protein L11/L12
PN96_RS00125	SM00663	RNA polymerase I subunit A N-terminus
PN96_RS00145	SM00986	Uracil DNA glycosylase superfamily
PN96_RS00145	SM00987	UreE urease accessory protein, C-terminal domain 
PN96_RS00165	SM00411	bacterial (prokaryotic) histone like domain
PN96_RS00175	SM01209	PN96_RS00175
PN96_RS00175	SM01210	PN96_RS00175
PN96_RS00180	SM00798	AICARFT/IMPCHase bienzyme
PN96_RS00180	SM00851	MGS-like domain
PN96_RS00190	SM00422	helix_turn_helix, mercury resistance
PN96_RS00195	SM00862	Transcriptional regulatory protein, C terminal
PN96_RS00265	SM01018	B12 binding domain
PN96_RS00300	SM00421	helix_turn_helix, Lux Regulon
PN96_RS00310	SM00052	Putative diguanylate phosphodiesterase
PN96_RS00310	SM00267	diguanylate cyclase
PN96_RS00330	SM00965	Secretin and TonB N terminus short domain
PN96_RS00340	SM00028	Tetratricopeptide repeats
PN96_RS00345	SM00382	ATPases associated with a variety of cellular activities
PN96_RS00415	SM00316	Ribosomal protein S1-like RNA-binding domain
PN96_RS00435	SM00670	Large family of predicted nucleotide-binding domains
PN96_RS00440	SM00487	DEAD-like helicases superfamily
PN96_RS00440	SM00490	helicase superfamily c-terminal domain
PN96_RS00470	SM00116	Domain in cystathionine beta-synthase and other proteins.
PN96_RS00470	SM00924	MgtE intracellular N domain
PN96_RS00500	SM00382	ATPases associated with a variety of cellular activities
PN96_RS00515	SM00116	Domain in cystathionine beta-synthase and other proteins.
PN96_RS00525	SM00382	ATPases associated with a variety of cellular activities
PN96_RS00560	SM00563	Phosphate acyltransferases
PN96_RS00670	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
PN96_RS00745	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PN96_RS00745	SM01049	PN96_RS00745
PN96_RS00795	SM00478	endonuclease III
PN96_RS00795	SM00525	PN96_RS00795
PN96_RS00815	SM00729	Elongator protein 3, MiaB family, Radical SAM
PN96_RS00830	SM01152	PN96_RS00830
PN96_RS00850	SM00382	ATPases associated with a variety of cellular activities
PN96_RS00860	SM00732	Likely ribonuclease with RNase H fold.
PN96_RS00890	SM00731	SprT homologues.
PN96_RS00910	SM00861	Transketolase, pyrimidine binding domain
PN96_RS00915	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
PN96_RS01040	SM00838	Elongation factor G C-terminus
PN96_RS01050	SM00358	Double-stranded RNA binding motif
PN96_RS01050	SM00535	Ribonuclease III family
PN96_RS01075	SM00073	Histidine Phosphotransfer domain
PN96_RS01075	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PN96_RS01075	SM00387	Histidine kinase-like ATPases
PN96_RS01075	SM00388	His Kinase A (phosphoacceptor) domain
PN96_RS01075	SM00448	cheY-homologous receiver domain
PN96_RS01090	SM00954	Region found in RelA / SpoT proteins
PN96_RS01105	SM01192	PN96_RS01105
PN96_RS01105	SM01193	PN96_RS01105
PN96_RS01140	SM00257	Lysin motif
PN96_RS01150	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
PN96_RS01150	SM00534	ATPase domain of DNA mismatch repair MUTS family
PN96_RS01160	SM00382	ATPases associated with a variety of cellular activities
PN96_RS01170	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
PN96_RS01250	SM00829	Enoylreductase
PN96_RS01280	SM01091	Transporter associated domain
PN96_RS01290	SM00382	ATPases associated with a variety of cellular activities
PN96_RS01290	SM00962	SRP54-type protein, GTPase domain
PN96_RS01290	SM00963	SRP54-type protein, helical bundle domain
PN96_RS01355	SM00644	PN96_RS01355
PN96_RS01360	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PN96_RS01360	SM00895	PN96_RS01360
PN96_RS01390	SM00947	Carbonic anhydrase
PN96_RS01400	SM00382	ATPases associated with a variety of cellular activities
PN96_RS01445	SM00487	DEAD-like helicases superfamily
PN96_RS01445	SM00490	helicase superfamily c-terminal domain
PN96_RS01445	SM00847	Helicase associated domain (HA2)  Add an annotation
PN96_RS01485	SM00938	Nitrogen regulatory protein P-II
PN96_RS01505	SM00382	ATPases associated with a variety of cellular activities
PN96_RS01515	SM01068	Putative carbohydrate binding domain
PN96_RS01535	SM00382	ATPases associated with a variety of cellular activities
PN96_RS01540	SM00382	ATPases associated with a variety of cellular activities
PN96_RS01560	SM00091	PAS domain
PN96_RS01560	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PN96_RS01560	SM00387	Histidine kinase-like ATPases
PN96_RS01560	SM00388	His Kinase A (phosphoacceptor) domain
PN96_RS01560	SM00448	cheY-homologous receiver domain
PN96_RS01605	SM00363	S4 RNA-binding domain
PN96_RS01630	SM01103	PN96_RS01630
PN96_RS01640	SM00382	ATPases associated with a variety of cellular activities
PN96_RS01675	SM00316	Ribosomal protein S1-like RNA-binding domain
PN96_RS01695	SM01387	PN96_RS01695
PN96_RS01700	SM00316	Ribosomal protein S1-like RNA-binding domain
PN96_RS01700	SM00322	K homology RNA-binding domain
PN96_RS01705	SM00028	Tetratricopeptide repeats
PN96_RS01725	SM00052	Putative diguanylate phosphodiesterase
PN96_RS01725	SM00091	PAS domain
PN96_RS01725	SM00267	diguanylate cyclase
PN96_RS01770	SM01133	PN96_RS01770
PN96_RS01775	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
PN96_RS01805	SM00382	ATPases associated with a variety of cellular activities
PN96_RS01810	SM00838	Elongation factor G C-terminus
PN96_RS01810	SM00889	Elongation factor G, domain IV
PN96_RS01830	SM00342	helix_turn_helix, arabinose operon control protein
PN96_RS01845	SM00858	PN96_RS01845
PN96_RS01895	SM00028	Tetratricopeptide repeats
PN96_RS01940	SM00354	helix_turn _helix lactose operon repressor
PN96_RS01945	SM00354	helix_turn _helix lactose operon repressor
PN96_RS01975	SM00420	helix_turn_helix, Deoxyribose operon repressor
PN96_RS01975	SM01134	PN96_RS01975
PN96_RS02060	SM00925	MltA specific insert domain
PN96_RS02075	SM00267	diguanylate cyclase
PN96_RS02100	SM00464	Found in ATP-dependent protease La (LON)
PN96_RS02155	SM00900	PN96_RS02155
PN96_RS02195	SM00487	DEAD-like helicases superfamily
PN96_RS02195	SM00490	helicase superfamily c-terminal domain
PN96_RS02290	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
PN96_RS02335	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
PN96_RS02345	SM00935	Outer membrane protein (OmpH-like)
PN96_RS02375	SM00481	DNA polymerase alpha chain like domain
PN96_RS02385	SM00977	TilS substrate C-terminal domain
PN96_RS02395	SM00938	Nitrogen regulatory protein P-II
PN96_RS02410	SM00257	Lysin motif
PN96_RS02415	SM00849	Metallo-beta-lactamase superfamily
PN96_RS02430	SM00479	PN96_RS02430
PN96_RS02525	SM01130	PN96_RS02525
PN96_RS02620	SM00382	ATPases associated with a variety of cellular activities
PN96_RS02625	SM00387	Histidine kinase-like ATPases
PN96_RS02625	SM00388	His Kinase A (phosphoacceptor) domain
PN96_RS02630	SM00382	ATPases associated with a variety of cellular activities
PN96_RS02630	SM00448	cheY-homologous receiver domain
PN96_RS02655	SM00382	ATPases associated with a variety of cellular activities
PN96_RS02715	SM00382	ATPases associated with a variety of cellular activities
PN96_RS02715	SM00962	SRP54-type protein, GTPase domain
PN96_RS02730	SM00448	cheY-homologous receiver domain
PN96_RS02740	SM00073	Histidine Phosphotransfer domain
PN96_RS02740	SM00260	Two component signalling adaptor domain
PN96_RS02740	SM00387	Histidine kinase-like ATPases
PN96_RS02740	SM01231	PN96_RS02740
PN96_RS02745	SM00448	cheY-homologous receiver domain
PN96_RS02755	SM00260	Two component signalling adaptor domain
PN96_RS02760	SM00260	Two component signalling adaptor domain
PN96_RS02770	SM00382	ATPases associated with a variety of cellular activities
PN96_RS02865	SM00855	Phosphoglycerate mutase family
PN96_RS02870	SM00463	Small MutS-related domain
PN96_RS02915	SM00825	Beta-ketoacyl synthase
PN96_RS02925	SM00812	Alpha-L-fucosidase
PN96_RS02935	SM00420	helix_turn_helix, Deoxyribose operon repressor
PN96_RS02935	SM01134	PN96_RS02935
PN96_RS02940	SM00812	Alpha-L-fucosidase
PN96_RS02955	SM00859	Semialdehyde dehydrogenase, NAD binding domain
PN96_RS03000	SM00448	cheY-homologous receiver domain
PN96_RS03015	SM00382	ATPases associated with a variety of cellular activities
PN96_RS03025	SM00493	PN96_RS03025
PN96_RS03055	SM00098	Alkaline phosphatase homologues
PN96_RS03080	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
PN96_RS03100	SM00870	PN96_RS03100
PN96_RS03120	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
PN96_RS03120	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
PN96_RS03120	SM00493	PN96_RS03120
PN96_RS03135	SM00382	ATPases associated with a variety of cellular activities
PN96_RS03145	SM00062	Bacterial periplasmic substrate-binding proteins
PN96_RS03145	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
PN96_RS03155	SM00344	helix_turn_helix ASNC type
PN96_RS03160	SM00382	ATPases associated with a variety of cellular activities
PN96_RS03205	SM00073	Histidine Phosphotransfer domain
PN96_RS03220	SM00859	Semialdehyde dehydrogenase, NAD binding domain
PN96_RS03270	SM00479	PN96_RS03270
PN96_RS03290	SM00478	endonuclease III
PN96_RS03290	SM00525	PN96_RS03290
PN96_RS03300	SM00900	PN96_RS03300
PN96_RS03330	SM00487	DEAD-like helicases superfamily
PN96_RS03330	SM00490	helicase superfamily c-terminal domain
PN96_RS03335	SM00382	ATPases associated with a variety of cellular activities
PN96_RS03335	SM00448	cheY-homologous receiver domain
PN96_RS03350	SM00729	Elongator protein 3, MiaB family, Radical SAM
PN96_RS03355	SM00852	Probable molybdopterin binding domain
PN96_RS03390	SM00382	ATPases associated with a variety of cellular activities
PN96_RS03395	SM00382	ATPases associated with a variety of cellular activities
PN96_RS03435	SM00382	ATPases associated with a variety of cellular activities
PN96_RS03440	SM00642	Alpha-amylase domain
PN96_RS03445	SM00267	diguanylate cyclase
PN96_RS03470	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PN96_RS03505	SM00226	Low molecular weight phosphatase family
PN96_RS03515	SM00316	Ribosomal protein S1-like RNA-binding domain
PN96_RS03520	SM00363	S4 RNA-binding domain
PN96_RS03550	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
PN96_RS03555	SM00822	PN96_RS03555
PN96_RS03565	SM00825	Beta-ketoacyl synthase
PN96_RS03640	SM00481	DNA polymerase alpha chain like domain
PN96_RS03655	SM00822	PN96_RS03655
PN96_RS03670	SM00316	Ribosomal protein S1-like RNA-binding domain
PN96_RS03675	SM00411	bacterial (prokaryotic) histone like domain
PN96_RS03685	SM00028	Tetratricopeptide repeats
PN96_RS03690	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
PN96_RS03750	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
PN96_RS03765	SM00387	Histidine kinase-like ATPases
PN96_RS03765	SM00388	His Kinase A (phosphoacceptor) domain
PN96_RS03770	SM00421	helix_turn_helix, Lux Regulon
PN96_RS03770	SM00448	cheY-homologous receiver domain
PN96_RS03775	SM00460	Transglutaminase/protease-like homologues
PN96_RS03785	SM00460	Transglutaminase/protease-like homologues
PN96_RS03800	SM00267	diguanylate cyclase
PN96_RS03805	SM00849	Metallo-beta-lactamase superfamily
PN96_RS03860	SM00387	Histidine kinase-like ATPases
PN96_RS03860	SM00388	His Kinase A (phosphoacceptor) domain
PN96_RS03865	SM00448	cheY-homologous receiver domain
PN96_RS03865	SM00862	Transcriptional regulatory protein, C terminal
PN96_RS03870	SM00729	Elongator protein 3, MiaB family, Radical SAM
PN96_RS03875	SM00052	Putative diguanylate phosphodiesterase
PN96_RS03875	SM00091	PAS domain
PN96_RS03925	SM00387	Histidine kinase-like ATPases
PN96_RS03925	SM00388	His Kinase A (phosphoacceptor) domain
PN96_RS03925	SM00448	cheY-homologous receiver domain
PN96_RS03945	SM00100	Cyclic nucleotide-monophosphate binding domain
PN96_RS03945	SM00419	helix_turn_helix, cAMP Regulatory protein
PN96_RS03985	SM00481	DNA polymerase alpha chain like domain
PN96_RS04000	SM00363	S4 RNA-binding domain
PN96_RS04010	SM00841	Elongation factor P, C-terminal
PN96_RS04010	SM01185	PN96_RS04010
PN96_RS04020	SM00486	DNA polymerase type-B family
PN96_RS04025	SM00421	helix_turn_helix, Lux Regulon
PN96_RS04025	SM00448	cheY-homologous receiver domain
PN96_RS04030	SM00278	Helix-hairpin-helix DNA-binding motif class 1
PN96_RS04030	SM00465	GIY-YIG type nucleases (URI domain)
PN96_RS04090	SM00852	Probable molybdopterin binding domain
PN96_RS04135	SM00434	DNA Topoisomerase IV
PN96_RS04175	SM00849	Metallo-beta-lactamase superfamily
PN96_RS04205	SM00387	Histidine kinase-like ATPases
PN96_RS04205	SM01049	PN96_RS04205
PN96_RS04210	SM00421	helix_turn_helix, Lux Regulon
PN96_RS04210	SM00448	cheY-homologous receiver domain
PN96_RS04215	SM00347	helix_turn_helix multiple antibiotic resistance protein
PN96_RS04225	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PN96_RS04225	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PN96_RS04230	SM00479	PN96_RS04230
PN96_RS04235	SM00100	Cyclic nucleotide-monophosphate binding domain
PN96_RS04235	SM00116	Domain in cystathionine beta-synthase and other proteins.
PN96_RS04260	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PN96_RS04320	SM00091	PAS domain
PN96_RS04320	SM00382	ATPases associated with a variety of cellular activities
PN96_RS04565	SM00060	Fibronectin type 3 domain
PN96_RS04635	SM01022	PN96_RS04635
PN96_RS04730	SM00382	ATPases associated with a variety of cellular activities
PN96_RS04730	SM00448	cheY-homologous receiver domain
PN96_RS04735	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PN96_RS04735	SM00387	Histidine kinase-like ATPases
PN96_RS04735	SM00388	His Kinase A (phosphoacceptor) domain
PN96_RS04735	SM00448	cheY-homologous receiver domain
PN96_RS04815	SM00354	helix_turn _helix lactose operon repressor
PN96_RS04840	SM00851	MGS-like domain
PN96_RS04875	SM00388	His Kinase A (phosphoacceptor) domain
PN96_RS04880	SM00448	cheY-homologous receiver domain
PN96_RS04880	SM00862	Transcriptional regulatory protein, C terminal
PN96_RS04885	SM01081	Putative carbohydrate binding domain
PN96_RS04905	SM00360	RNA recognition motif
PN96_RS04990	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
PN96_RS05010	SM00062	Bacterial periplasmic substrate-binding proteins
PN96_RS05025	SM00382	ATPases associated with a variety of cellular activities
PN96_RS05060	SM01230	PN96_RS05060
PN96_RS05070	SM00530	Helix-turn-helix XRE-family like proteins 
PN96_RS05110	SM00347	helix_turn_helix multiple antibiotic resistance protein
PN96_RS05140	SM00387	Histidine kinase-like ATPases
PN96_RS05140	SM00388	His Kinase A (phosphoacceptor) domain
PN96_RS05140	SM00448	cheY-homologous receiver domain
PN96_RS05145	SM00028	Tetratricopeptide repeats
PN96_RS05205	SM00631	PN96_RS05205
PN96_RS05245	SM00387	Histidine kinase-like ATPases
PN96_RS05245	SM00388	His Kinase A (phosphoacceptor) domain
PN96_RS05250	SM00448	cheY-homologous receiver domain
PN96_RS05250	SM00862	Transcriptional regulatory protein, C terminal
PN96_RS05260	SM00822	PN96_RS05260
PN96_RS05265	SM01236	PN96_RS05265
PN96_RS05290	SM00382	ATPases associated with a variety of cellular activities
PN96_RS05340	SM00091	PAS domain
PN96_RS05340	SM00387	Histidine kinase-like ATPases
PN96_RS05345	SM00448	cheY-homologous receiver domain
PN96_RS05355	SM00342	helix_turn_helix, arabinose operon control protein
PN96_RS05355	SM00871	Bacterial transcription activator, effector binding domain
PN96_RS05370	SM01350	PN96_RS05370
PN96_RS05380	SM00382	ATPases associated with a variety of cellular activities
PN96_RS05420	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PN96_RS05420	SM00895	PN96_RS05420
PN96_RS05465	SM00895	PN96_RS05465
PN96_RS05475	SM00052	Putative diguanylate phosphodiesterase
PN96_RS05475	SM00267	diguanylate cyclase
PN96_RS05500	SM01266	PN96_RS05500
PN96_RS05525	SM00028	Tetratricopeptide repeats
PN96_RS05525	SM00267	diguanylate cyclase
PN96_RS05550	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
PN96_RS05575	SM00382	ATPases associated with a variety of cellular activities
PN96_RS05590	SM00062	Bacterial periplasmic substrate-binding proteins
PN96_RS05625	SM00316	Ribosomal protein S1-like RNA-binding domain
PN96_RS05645	SM00382	ATPases associated with a variety of cellular activities
PN96_RS05655	SM00945	ProQ/FINO family
PN96_RS05660	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
PN96_RS05660	SM00245	tail specific protease
PN96_RS05695	SM00981	PN96_RS05695
PN96_RS05705	SM00382	ATPases associated with a variety of cellular activities
PN96_RS05775	SM00255	Toll - interleukin 1 - resistance
PN96_RS05800	SM00387	Histidine kinase-like ATPases
PN96_RS05800	SM00388	His Kinase A (phosphoacceptor) domain
PN96_RS05800	SM00448	cheY-homologous receiver domain
PN96_RS05805	SM00897	FIST N domain
PN96_RS05805	SM01204	PN96_RS05805
PN96_RS05855	SM00100	Cyclic nucleotide-monophosphate binding domain
PN96_RS05855	SM00419	helix_turn_helix, cAMP Regulatory protein
PN96_RS05880	SM00382	ATPases associated with a variety of cellular activities
PN96_RS05920	SM00342	helix_turn_helix, arabinose operon control protein
PN96_RS05945	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
PN96_RS05980	SM00382	ATPases associated with a variety of cellular activities
PN96_RS05985	SM00387	Histidine kinase-like ATPases
PN96_RS05985	SM00388	His Kinase A (phosphoacceptor) domain
PN96_RS05990	SM00382	ATPases associated with a variety of cellular activities
PN96_RS05990	SM00448	cheY-homologous receiver domain
PN96_RS06005	SM00382	ATPases associated with a variety of cellular activities
PN96_RS06015	SM00852	Probable molybdopterin binding domain
PN96_RS06035	SM01144	PN96_RS06035
PN96_RS06055	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PN96_RS06070	SM00091	PAS domain
PN96_RS06070	SM00267	diguanylate cyclase
PN96_RS06075	SM00448	cheY-homologous receiver domain
PN96_RS06130	SM00382	ATPases associated with a variety of cellular activities
PN96_RS06130	SM00487	DEAD-like helicases superfamily
PN96_RS06130	SM00490	helicase superfamily c-terminal domain
PN96_RS06130	SM00847	Helicase associated domain (HA2)  Add an annotation
PN96_RS06160	SM00479	PN96_RS06160
PN96_RS06190	SM00382	ATPases associated with a variety of cellular activities
PN96_RS06195	SM00382	ATPases associated with a variety of cellular activities
PN96_RS06220	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
PN96_RS06230	SM00448	cheY-homologous receiver domain
PN96_RS06235	SM00100	Cyclic nucleotide-monophosphate binding domain
PN96_RS06235	SM00387	Histidine kinase-like ATPases
PN96_RS06260	SM00988	UreE urease accessory protein, N-terminal domain
PN96_RS06285	SM00382	ATPases associated with a variety of cellular activities
PN96_RS06290	SM00382	ATPases associated with a variety of cellular activities
PN96_RS06310	SM00387	Histidine kinase-like ATPases
PN96_RS06310	SM00388	His Kinase A (phosphoacceptor) domain
PN96_RS06310	SM00448	cheY-homologous receiver domain
PN96_RS06315	SM00421	helix_turn_helix, Lux Regulon
PN96_RS06315	SM00448	cheY-homologous receiver domain
PN96_RS06330	SM00346	helix_turn_helix isocitrate lyase regulation
PN96_RS06345	SM00859	Semialdehyde dehydrogenase, NAD binding domain
PN96_RS06410	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PN96_RS06410	SM00895	PN96_RS06410
PN96_RS06520	SM00382	ATPases associated with a variety of cellular activities
PN96_RS06570	SM00028	Tetratricopeptide repeats
PN96_RS06580	SM00420	helix_turn_helix, Deoxyribose operon repressor
PN96_RS06580	SM01134	PN96_RS06580
PN96_RS06600	SM00342	helix_turn_helix, arabinose operon control protein
PN96_RS06635	SM00354	helix_turn _helix lactose operon repressor
PN96_RS06645	SM00342	helix_turn_helix, arabinose operon control protein
PN96_RS06665	SM00382	ATPases associated with a variety of cellular activities
PN96_RS06680	SM00829	Enoylreductase
PN96_RS06685	SM00342	helix_turn_helix, arabinose operon control protein
PN96_RS06690	SM00342	helix_turn_helix, arabinose operon control protein
PN96_RS06800	SM00382	ATPases associated with a variety of cellular activities
PN96_RS06890	SM00382	ATPases associated with a variety of cellular activities
PN96_RS06910	SM00855	Phosphoglycerate mutase family
PN96_RS06930	SM00903	Flavin reductase like domain
PN96_RS06990	SM00060	Fibronectin type 3 domain
PN96_RS07130	SM00530	Helix-turn-helix XRE-family like proteins 
PN96_RS07135	SM00530	Helix-turn-helix XRE-family like proteins 
PN96_RS07190	SM00479	PN96_RS07190
PN96_RS07225	SM00411	bacterial (prokaryotic) histone like domain
PN96_RS07235	SM00354	helix_turn _helix lactose operon repressor
PN96_RS07250	SM00640	Glycosyl hydrolases family 32
PN96_RS07255	SM00873	B3/4 domain
PN96_RS07255	SM00874	tRNA synthetase B5 domain
PN96_RS07255	SM00896	Ferredoxin-fold anticodon binding domain
PN96_RS07265	SM00530	Helix-turn-helix XRE-family like proteins 
PN96_RS07285	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
PN96_RS07300	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PN96_RS07300	SM00866	PN96_RS07300
PN96_RS07390	SM00487	DEAD-like helicases superfamily
PN96_RS07390	SM00490	helicase superfamily c-terminal domain
PN96_RS07395	SM00919	Malic enzyme, NAD binding domain
PN96_RS07395	SM01274	PN96_RS07395
PN96_RS07430	SM00382	ATPases associated with a variety of cellular activities
PN96_RS07435	SM00382	ATPases associated with a variety of cellular activities
PN96_RS07455	SM00100	Cyclic nucleotide-monophosphate binding domain
PN96_RS07455	SM00387	Histidine kinase-like ATPases
PN96_RS07460	SM00448	cheY-homologous receiver domain
PN96_RS07545	SM00382	ATPases associated with a variety of cellular activities
PN96_RS07595	SM00363	S4 RNA-binding domain
PN96_RS07600	SM00487	DEAD-like helicases superfamily
PN96_RS07600	SM00490	helicase superfamily c-terminal domain
PN96_RS07610	SM00448	cheY-homologous receiver domain
PN96_RS07610	SM00862	Transcriptional regulatory protein, C terminal
PN96_RS07615	SM00387	Histidine kinase-like ATPases
PN96_RS07660	SM00382	ATPases associated with a variety of cellular activities
PN96_RS07675	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
PN96_RS07675	SM00382	ATPases associated with a variety of cellular activities
PN96_RS07705	SM00155	Phospholipase D. Active site motifs.
PN96_RS07750	SM00382	ATPases associated with a variety of cellular activities
PN96_RS07770	SM00382	ATPases associated with a variety of cellular activities
PN96_RS07775	SM00382	ATPases associated with a variety of cellular activities
PN96_RS07785	SM01131	PN96_RS07785
PN96_RS07845	SM00840	PN96_RS07845
PN96_RS07860	SM00052	Putative diguanylate phosphodiesterase
PN96_RS07910	SM00382	ATPases associated with a variety of cellular activities
PN96_RS07925	SM00528	Domain in histone-like proteins of HNS family
PN96_RS08015	SM00729	Elongator protein 3, MiaB family, Radical SAM
PN96_RS08015	SM00876	Biotin and Thiamin Synthesis associated domain
PN96_RS08030	SM00382	ATPases associated with a variety of cellular activities
PN96_RS08040	SM00843	PN96_RS08040
PN96_RS08045	SM00344	helix_turn_helix ASNC type
PN96_RS08050	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
PN96_RS08050	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
PN96_RS08080	SM00347	helix_turn_helix multiple antibiotic resistance protein
PN96_RS08100	SM00530	Helix-turn-helix XRE-family like proteins 
PN96_RS08105	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
PN96_RS08140	SM00060	Fibronectin type 3 domain
PN96_RS08165	SM00387	Histidine kinase-like ATPases
PN96_RS08165	SM00388	His Kinase A (phosphoacceptor) domain
PN96_RS08165	SM00448	cheY-homologous receiver domain
PN96_RS08225	SM00028	Tetratricopeptide repeats
PN96_RS08280	SM00382	ATPases associated with a variety of cellular activities
PN96_RS08285	SM00278	Helix-hairpin-helix DNA-binding motif class 1
PN96_RS08340	SM00342	helix_turn_helix, arabinose operon control protein
PN96_RS08370	SM00448	cheY-homologous receiver domain
PN96_RS08370	SM00862	Transcriptional regulatory protein, C terminal
PN96_RS08380	SM00354	helix_turn _helix lactose operon repressor
PN96_RS08415	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
PN96_RS08415	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
PN96_RS08415	SM00493	PN96_RS08415
PN96_RS08445	SM00316	Ribosomal protein S1-like RNA-binding domain
PN96_RS08450	SM00382	ATPases associated with a variety of cellular activities
PN96_RS08450	SM01086	C-terminal, D2-small domain, of ClpB protein
PN96_RS08460	SM00357	Cold shock protein domain
PN96_RS08485	SM00491	PN96_RS08485
PN96_RS08540	SM00062	Bacterial periplasmic substrate-binding proteins
PN96_RS08540	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
PN96_RS08545	SM00382	ATPases associated with a variety of cellular activities
PN96_RS08585	SM00763	PrkA AAA domain
PN96_RS08615	SM00382	ATPases associated with a variety of cellular activities
PN96_RS08620	SM00849	Metallo-beta-lactamase superfamily
PN96_RS08635	SM00382	ATPases associated with a variety of cellular activities
PN96_RS08650	SM00487	DEAD-like helicases superfamily
PN96_RS08650	SM00490	helicase superfamily c-terminal domain
PN96_RS08650	SM00982	PN96_RS08650
PN96_RS08650	SM01058	CarD-like/TRCF domain
PN96_RS08700	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PN96_RS08700	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PN96_RS08720	SM00116	Domain in cystathionine beta-synthase and other proteins.
PN96_RS08750	SM00530	Helix-turn-helix XRE-family like proteins 
PN96_RS08765	SM00382	ATPases associated with a variety of cellular activities
PN96_RS08780	SM01230	PN96_RS08780
PN96_RS08785	SM01230	PN96_RS08785
PN96_RS08815	SM00862	Transcriptional regulatory protein, C terminal
PN96_RS08885	SM00530	Helix-turn-helix XRE-family like proteins 
PN96_RS08930	SM00344	helix_turn_helix ASNC type
PN96_RS08980	SM00978	PN96_RS08980
PN96_RS08990	SM00563	Phosphate acyltransferases
PN96_RS09010	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
PN96_RS09040	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
PN96_RS09045	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
PN96_RS09050	SM01144	PN96_RS09050
PN96_RS09070	SM00411	bacterial (prokaryotic) histone like domain
PN96_RS09075	SM00382	ATPases associated with a variety of cellular activities
PN96_RS09075	SM00464	Found in ATP-dependent protease La (LON)
PN96_RS09080	SM00382	ATPases associated with a variety of cellular activities
PN96_RS09080	SM00994	ClpX C4-type zinc finger
PN96_RS09080	SM01086	C-terminal, D2-small domain, of ClpB protein
PN96_RS09100	SM00387	Histidine kinase-like ATPases
PN96_RS09100	SM00388	His Kinase A (phosphoacceptor) domain
PN96_RS09105	SM00382	ATPases associated with a variety of cellular activities
PN96_RS09105	SM00448	cheY-homologous receiver domain
PN96_RS09130	SM00382	ATPases associated with a variety of cellular activities
PN96_RS09150	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PN96_RS09150	SM00387	Histidine kinase-like ATPases
PN96_RS09150	SM00388	His Kinase A (phosphoacceptor) domain
PN96_RS09155	SM00448	cheY-homologous receiver domain
PN96_RS09155	SM00862	Transcriptional regulatory protein, C terminal
PN96_RS09180	SM00487	DEAD-like helicases superfamily
PN96_RS09180	SM00490	helicase superfamily c-terminal domain
PN96_RS09185	SM01091	Transporter associated domain
PN96_RS09205	SM00823	Phosphopantetheine attachment site
PN96_RS09280	SM00474	3'-5' exonuclease
PN96_RS09310	SM00487	DEAD-like helicases superfamily
PN96_RS09310	SM00491	PN96_RS09310
PN96_RS09320	SM00020	Trypsin-like serine protease
PN96_RS09335	SM00836	DALR anticodon binding domain
PN96_RS09335	SM01016	Arginyl tRNA synthetase N terminal dom
PN96_RS09355	SM00899	PN96_RS09355
PN96_RS09360	SM00342	helix_turn_helix, arabinose operon control protein
PN96_RS09370	SM00382	ATPases associated with a variety of cellular activities
PN96_RS09380	SM00881	CoA binding domain
PN96_RS09395	SM00861	Transketolase, pyrimidine binding domain
PN96_RS09500	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
PN96_RS09520	SM00387	Histidine kinase-like ATPases
PN96_RS09525	SM00862	Transcriptional regulatory protein, C terminal
PN96_RS09555	SM00116	Domain in cystathionine beta-synthase and other proteins.
PN96_RS09560	SM00938	Nitrogen regulatory protein P-II
PN96_RS09595	SM00244	prohibitin homologues
PN96_RS09615	SM00278	Helix-hairpin-helix DNA-binding motif class 1
PN96_RS09615	SM00292	breast cancer carboxy-terminal domain
PN96_RS09615	SM00532	Ligase N family
PN96_RS09620	SM00771	ZipA, C-terminal domain (FtsZ-binding)
PN96_RS09675	SM00047	Lysozyme subfamily 2
PN96_RS09720	SM00138	Methyltransferase, chemotaxis proteins 
PN96_RS09725	SM00260	Two component signalling adaptor domain
PN96_RS09725	SM00448	cheY-homologous receiver domain
PN96_RS09730	SM00858	PN96_RS09730
PN96_RS09810	SM00463	Small MutS-related domain
PN96_RS09815	SM00363	S4 RNA-binding domain
PN96_RS09850	SM00937	PN96_RS09850
PN96_RS09870	SM01400	PN96_RS09870
PN96_RS10000	SM00729	Elongator protein 3, MiaB family, Radical SAM
PN96_RS10015	SM00116	Domain in cystathionine beta-synthase and other proteins.
PN96_RS10015	SM01091	Transporter associated domain
PN96_RS10070	SM00936	Penicillin-binding protein 5, C-terminal domain 
PN96_RS10085	SM00729	Elongator protein 3, MiaB family, Radical SAM
PN96_RS10100	SM00642	Alpha-amylase domain
PN96_RS10110	SM00354	helix_turn _helix lactose operon repressor
PN96_RS10120	SM00382	ATPases associated with a variety of cellular activities
PN96_RS10120	SM00930	PN96_RS10120
PN96_RS10150	SM00028	Tetratricopeptide repeats
PN96_RS10155	SM00267	diguanylate cyclase
PN96_RS10165	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
PN96_RS10165	SM00475	5'-3' exonuclease
PN96_RS10195	SM00981	PN96_RS10195
PN96_RS10220	SM00861	Transketolase, pyrimidine binding domain
PN96_RS10270	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
PN96_RS10330	SM01211	PN96_RS10330
PN96_RS10335	SM00062	Bacterial periplasmic substrate-binding proteins
PN96_RS10375	SM00271	DnaJ molecular chaperone homology domain
PN96_RS10430	SM00421	helix_turn_helix, Lux Regulon
PN96_RS10430	SM00448	cheY-homologous receiver domain
PN96_RS10435	SM00387	Histidine kinase-like ATPases
PN96_RS10455	SM00342	helix_turn_helix, arabinose operon control protein
PN96_RS10480	SM01007	Class II Aldolase and Adducin N-terminal domain
PN96_RS10575	SM00116	Domain in cystathionine beta-synthase and other proteins.
PN96_RS10575	SM01240	PN96_RS10575
PN96_RS10595	SM00382	ATPases associated with a variety of cellular activities
PN96_RS10600	SM00564	beta-propeller repeat
PN96_RS10620	SM00530	Helix-turn-helix XRE-family like proteins 
PN96_RS10630	SM00562	PN96_RS10630
PN96_RS10655	SM00271	DnaJ molecular chaperone homology domain
PN96_RS10700	SM01323	PN96_RS10700
PN96_RS10715	SM00020	Trypsin-like serine protease
PN96_RS10720	SM00116	Domain in cystathionine beta-synthase and other proteins.
PN96_RS10760	SM00382	ATPases associated with a variety of cellular activities
PN96_RS10790	SM00091	PAS domain
PN96_RS10790	SM00387	Histidine kinase-like ATPases
PN96_RS10790	SM00388	His Kinase A (phosphoacceptor) domain
PN96_RS10795	SM00448	cheY-homologous receiver domain
PN96_RS10795	SM00862	Transcriptional regulatory protein, C terminal
PN96_RS10885	SM00382	ATPases associated with a variety of cellular activities
PN96_RS10900	SM00382	ATPases associated with a variety of cellular activities
PN96_RS10900	SM01086	C-terminal, D2-small domain, of ClpB protein
PN96_RS10910	SM00363	S4 RNA-binding domain
PN96_RS10920	SM00062	Bacterial periplasmic substrate-binding proteins
PN96_RS10930	SM00830	Chorismate mutase type II
PN96_RS10950	SM00382	ATPases associated with a variety of cellular activities
PN96_RS10960	SM00830	Chorismate mutase type II
PN96_RS11005	SM00448	cheY-homologous receiver domain
PN96_RS11005	SM00850	LytTr DNA-binding domain
PN96_RS11030	SM00904	Riboflavin kinase
PN96_RS11045	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
PN96_RS11060	SM01154	PN96_RS11060
PN96_RS11080	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
PN96_RS11090	SM00927	DNA mismatch repair enzyme MutH
PN96_RS11110	SM00382	ATPases associated with a variety of cellular activities
PN96_RS11155	SM00487	DEAD-like helicases superfamily
PN96_RS11155	SM00490	helicase superfamily c-terminal domain
PN96_RS11180	SM00986	Uracil DNA glycosylase superfamily
PN96_RS11180	SM00987	UreE urease accessory protein, C-terminal domain 
PN96_RS11185	SM00518	AP endonuclease family 2
PN96_RS11225	SM00448	cheY-homologous receiver domain
PN96_RS11225	SM00862	Transcriptional regulatory protein, C terminal
PN96_RS11235	SM00073	Histidine Phosphotransfer domain
PN96_RS11235	SM00091	PAS domain
PN96_RS11235	SM00387	Histidine kinase-like ATPases
PN96_RS11235	SM00388	His Kinase A (phosphoacceptor) domain
PN96_RS11235	SM00448	cheY-homologous receiver domain
PN96_RS11240	SM00729	Elongator protein 3, MiaB family, Radical SAM
PN96_RS11300	SM00851	MGS-like domain
PN96_RS11300	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
PN96_RS11305	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
PN96_RS11320	SM00957	SecA DEAD-like domain
PN96_RS11320	SM00958	SecA preprotein cross-linking domain
PN96_RS11335	SM00864	Tubulin/FtsZ family, GTPase domain
PN96_RS11335	SM00865	Tubulin/FtsZ family, C-terminal domain
PN96_RS11340	SM00842	Cell division protein FtsA
PN96_RS11425	SM00749	bacterial OsmY and nodulation domain
PN96_RS11475	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
PN96_RS11480	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
PN96_RS11485	SM00434	DNA Topoisomerase IV
PN96_RS11490	SM00387	Histidine kinase-like ATPases
PN96_RS11490	SM00433	TopoisomeraseII
PN96_RS11530	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PN96_RS11540	SM00880	PN96_RS11540
PN96_RS11540	SM01118	PN96_RS11540
PN96_RS11555	SM00287	Bacterial SH3 domain homologues
PN96_RS11565	SM00382	ATPases associated with a variety of cellular activities
PN96_RS11585	SM00905	Dihydroneopterin aldolase
PN96_RS11590	SM01207	PN96_RS11590
PN96_RS11615	SM00400	zinc finger
PN96_RS11615	SM00493	PN96_RS11615
PN96_RS11615	SM00766	DNA primase DnaG DnaB-binding
PN96_RS11645	SM00342	helix_turn_helix, arabinose operon control protein
PN96_RS11650	SM00052	Putative diguanylate phosphodiesterase
PN96_RS11665	SM00563	Phosphate acyltransferases
PN96_RS11705	SM00420	helix_turn_helix, Deoxyribose operon repressor
PN96_RS11705	SM01134	PN96_RS11705
PN96_RS11740	SM00014	Acid phosphatase homologues
PN96_RS11755	SM00917	LeuA allosteric (dimerisation) domain
PN96_RS11760	SM01329	PN96_RS11760
PN96_RS11780	SM00271	DnaJ molecular chaperone homology domain
PN96_RS11800	SM00650	Ribosomal RNA adenine dimethylases
PN96_RS11880	SM00382	ATPases associated with a variety of cellular activities
PN96_RS11955	SM00382	ATPases associated with a variety of cellular activities
PN96_RS12010	SM00487	DEAD-like helicases superfamily
PN96_RS12010	SM00490	helicase superfamily c-terminal domain
PN96_RS12040	SM00662	RNA polymerases D
PN96_RS12045	SM00363	S4 RNA-binding domain
PN96_RS12045	SM01390	PN96_RS12045
PN96_RS12110	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
PN96_RS12115	SM01374	PN96_RS12115
PN96_RS12135	SM00322	K homology RNA-binding domain
PN96_RS12150	SM01382	PN96_RS12150
PN96_RS12150	SM01383	PN96_RS12150
PN96_RS12170	SM01403	PN96_RS12170
PN96_RS12180	SM00487	DEAD-like helicases superfamily
PN96_RS12180	SM00490	helicase superfamily c-terminal domain
PN96_RS12185	SM00354	helix_turn _helix lactose operon repressor
PN96_RS12200	SM00382	ATPases associated with a variety of cellular activities
PN96_RS12200	SM01086	C-terminal, D2-small domain, of ClpB protein
PN96_RS12240	SM00672	Putative lipopolysaccharide-modifying enzyme.
PN96_RS12260	SM00849	Metallo-beta-lactamase superfamily
PN96_RS12260	SM01027	Beta-Casp domain
PN96_RS12330	SM00984	UDP binding domain
PN96_RS12340	SM00226	Low molecular weight phosphatase family
PN96_RS12350	SM00984	UDP binding domain
PN96_RS12465	SM00382	ATPases associated with a variety of cellular activities
PN96_RS12590	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
PN96_RS12590	SM01232	PN96_RS12590
PN96_RS12670	SM00382	ATPases associated with a variety of cellular activities
PN96_RS12675	SM00382	ATPases associated with a variety of cellular activities
PN96_RS12725	SM00028	Tetratricopeptide repeats
PN96_RS12730	SM00072	Guanylate kinase homologues.
PN96_RS12735	SM01409	PN96_RS12735
PN96_RS12740	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
PN96_RS12740	SM00954	Region found in RelA / SpoT proteins
PN96_RS12750	SM00487	DEAD-like helicases superfamily
PN96_RS12750	SM00490	helicase superfamily c-terminal domain
PN96_RS12760	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PN96_RS12760	SM00387	Histidine kinase-like ATPases
PN96_RS12760	SM00388	His Kinase A (phosphoacceptor) domain
PN96_RS12765	SM00448	cheY-homologous receiver domain
PN96_RS12765	SM00862	Transcriptional regulatory protein, C terminal
PN96_RS12785	SM00316	Ribosomal protein S1-like RNA-binding domain
PN96_RS12785	SM00732	Likely ribonuclease with RNase H fold.
PN96_RS12865	SM00382	ATPases associated with a variety of cellular activities
PN96_RS12880	SM00363	S4 RNA-binding domain
PN96_RS12930	SM01230	PN96_RS12930
PN96_RS12940	SM00091	PAS domain
PN96_RS12940	SM00387	Histidine kinase-like ATPases
PN96_RS12940	SM00388	His Kinase A (phosphoacceptor) domain
PN96_RS12945	SM00382	ATPases associated with a variety of cellular activities
PN96_RS12945	SM00448	cheY-homologous receiver domain
PN96_RS12950	SM00052	Putative diguanylate phosphodiesterase
PN96_RS12950	SM00267	diguanylate cyclase
PN96_RS12950	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PN96_RS12960	SM00729	Elongator protein 3, MiaB family, Radical SAM
PN96_RS12995	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
PN96_RS12995	SM00474	3'-5' exonuclease
PN96_RS12995	SM00475	5'-3' exonuclease
PN96_RS12995	SM00482	DNA polymerase A domain
PN96_RS13010	SM01004	Delta-aminolevulinic acid dehydratase
PN96_RS13065	SM00052	Putative diguanylate phosphodiesterase
PN96_RS13065	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PN96_RS13065	SM00091	PAS domain
PN96_RS13065	SM00267	diguanylate cyclase
PN96_RS13075	SM00382	ATPases associated with a variety of cellular activities
PN96_RS13080	SM00382	ATPases associated with a variety of cellular activities
PN96_RS13145	SM00858	PN96_RS13145
PN96_RS13205	SM00344	helix_turn_helix ASNC type
PN96_RS13250	SM00354	helix_turn _helix lactose operon repressor
PN96_RS13275	SM00382	ATPases associated with a variety of cellular activities
PN96_RS13355	SM00448	cheY-homologous receiver domain
PN96_RS13355	SM00862	Transcriptional regulatory protein, C terminal
PN96_RS13360	SM00387	Histidine kinase-like ATPases
PN96_RS13360	SM00388	His Kinase A (phosphoacceptor) domain
PN96_RS13425	SM00829	Enoylreductase
PN96_RS13465	SM00642	Alpha-amylase domain
PN96_RS13480	SM00387	Histidine kinase-like ATPases
PN96_RS13480	SM00433	TopoisomeraseII
PN96_RS13490	SM00480	DNA polymerase III beta subunit
PN96_RS13495	SM00382	ATPases associated with a variety of cellular activities
PN96_RS13495	SM00760	Bacterial dnaA protein helix-turn-helix domain
PN96_RS13500	SM00062	Bacterial periplasmic substrate-binding proteins
PN96_RS13500	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
PN96_RS13510	SM00382	ATPases associated with a variety of cellular activities
PN96_RS13525	SM01234	PN96_RS13525
PN96_RS13545	SM01228	PN96_RS13545
PN96_RS13560	SM00470	ParB-like nuclease domain
PN96_RS13600	SM00382	ATPases associated with a variety of cellular activities
PN96_RS13620	SM00062	Bacterial periplasmic substrate-binding proteins
PN96_RS13655	SM00382	ATPases associated with a variety of cellular activities
PN96_RS13665	SM00563	Phosphate acyltransferases
PN96_RS13730	SM00257	Lysin motif
PN96_RS13755	SM01001	AIR carboxylase
PN96_RS13865	SM00876	Biotin and Thiamin Synthesis associated domain
PN96_RS13930	SM00342	helix_turn_helix, arabinose operon control protein
PN96_RS13940	SM00341	Helicase and RNase D C-terminal
PN96_RS13940	SM00487	DEAD-like helicases superfamily
PN96_RS13940	SM00490	helicase superfamily c-terminal domain
PN96_RS13940	SM00956	PN96_RS13940
PN96_RS13960	SM00487	DEAD-like helicases superfamily
PN96_RS13960	SM00490	helicase superfamily c-terminal domain
PN96_RS13970	SM00357	Cold shock protein domain
PN96_RS13970	SM00382	ATPases associated with a variety of cellular activities
PN96_RS13970	SM00959	Rho termination factor, N-terminal domain
PN96_RS14060	SM01219	PN96_RS14060
PN96_RS14095	SM01144	PN96_RS14095
PN96_RS14125	SM00052	Putative diguanylate phosphodiesterase
PN96_RS14130	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
PN96_RS14135	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
PN96_RS14185	SM00382	ATPases associated with a variety of cellular activities
PN96_RS14185	SM00962	SRP54-type protein, GTPase domain
PN96_RS14185	SM00963	SRP54-type protein, helical bundle domain
PN96_RS14190	SM00382	ATPases associated with a variety of cellular activities
PN96_RS14210	SM00450	Rhodanese Homology Domain
PN96_RS14235	SM00563	Phosphate acyltransferases
PN96_RS14290	SM00360	RNA recognition motif
PN96_RS14395	SM00878	Biotin carboxylase C-terminal domain
PN96_RS14415	SM00479	PN96_RS14415
PN96_RS14420	SM00116	Domain in cystathionine beta-synthase and other proteins.
PN96_RS14430	SM00387	Histidine kinase-like ATPases
PN96_RS14430	SM00388	His Kinase A (phosphoacceptor) domain
PN96_RS14430	SM00448	cheY-homologous receiver domain
PN96_RS14455	SM01091	Transporter associated domain
PN96_RS14460	SM00421	helix_turn_helix, Lux Regulon
PN96_RS14460	SM00448	cheY-homologous receiver domain
PN96_RS14490	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PN96_RS14490	SM00387	Histidine kinase-like ATPases
PN96_RS14490	SM00388	His Kinase A (phosphoacceptor) domain
PN96_RS14495	SM00448	cheY-homologous receiver domain
PN96_RS14495	SM00862	Transcriptional regulatory protein, C terminal
PN96_RS14520	SM00883	Chaperonin 10 Kd subunit
PN96_RS14535	SM00857	Resolvase, N terminal domain
PN96_RS14560	SM00841	Elongation factor P, C-terminal
PN96_RS14560	SM01185	PN96_RS14560
PN96_RS14615	SM00971	Serine acetyltransferase, N-terminal
PN96_RS14630	SM00450	Rhodanese Homology Domain
PN96_RS14660	SM00479	PN96_RS14660
PN96_RS14735	SM00257	Lysin motif
PN96_RS14735	SM00646	PN96_RS14735
PN96_RS14740	SM00853	MutL C terminal dimerisation domain
PN96_RS14740	SM01340	PN96_RS14740
PN96_RS14760	SM00244	prohibitin homologues
PN96_RS14765	SM00244	prohibitin homologues
PN96_RS14775	SM00788	Adenylosuccinate synthetase
PN96_RS14780	SM00671	Sel1-like repeats.
PN96_RS14795	SM00316	Ribosomal protein S1-like RNA-binding domain
PN96_RS14795	SM00357	Cold shock protein domain
PN96_RS14795	SM00955	PN96_RS14795
PN96_RS14800	SM00967	RNA 2'-O ribose methyltransferase substrate binding
PN96_RS14835	SM01150	PN96_RS14835
PN96_RS14840	SM00100	Cyclic nucleotide-monophosphate binding domain
PN96_RS14840	SM00419	helix_turn_helix, cAMP Regulatory protein
PN96_RS14865	SM00382	ATPases associated with a variety of cellular activities
PN96_RS14900	SM00320	WD40 repeats
PN96_RS14940	SM00838	Elongation factor G C-terminus
PN96_RS14940	SM00889	Elongation factor G, domain IV
PN96_RS14960	SM00919	Malic enzyme, NAD binding domain
PN96_RS14960	SM01274	PN96_RS14960
PN96_RS15005	SM00859	Semialdehyde dehydrogenase, NAD binding domain
PN96_RS15040	SM00842	Cell division protein FtsA
PN96_RS15060	SM00965	Secretin and TonB N terminus short domain
PN96_RS15120	SM01005	Alanine racemase, C-terminal domain
PN96_RS15880	SM00729	Elongator protein 3, MiaB family, Radical SAM
PN96_RS16140	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
PN96_RS16140	SM00534	ATPase domain of DNA mismatch repair MUTS family
PN96_RS16650	SM00322	K homology RNA-binding domain
PN96_RS18385	SM00642	Alpha-amylase domain
PN96_RS18520	SM00825	Beta-ketoacyl synthase
PN96_RS19100	SM00434	DNA Topoisomerase IV
PN96_RS19565	SM00382	ATPases associated with a variety of cellular activities
PN96_RS19740	SM00388	His Kinase A (phosphoacceptor) domain
PN96_RS20515	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
PN96_RS20515	SM00245	tail specific protease
PN96_RS20805	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
PN96_RS22110	SM00490	helicase superfamily c-terminal domain
PN96_RS23235	SM00491	PN96_RS23235
