locus-tag class description D3H41_RS00005 PF11638 DnaA N-terminal domain D3H41_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix D3H41_RS00005 PF00308 Bacterial dnaA protein D3H41_RS00010 PF02767 DNA polymerase III beta subunit, central domain D3H41_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain D3H41_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain D3H41_RS00015 PF02463 RecF/RecN/SMC N terminal domain D3H41_RS00020 PF01751 Toprim domain D3H41_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS00020 PF18053 DNA gyrase B subunit insert domain D3H41_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus D3H41_RS00020 PF00204 DNA gyrase B D3H41_RS00035 PF00011 Hsp20/alpha crystallin family D3H41_RS00040 PF00155 Aminotransferase class I and II D3H41_RS00045 PF00128 Alpha amylase, catalytic domain D3H41_RS00050 PF05746 DALR anticodon binding domain D3H41_RS00050 PF02092 Glycyl-tRNA synthetase beta subunit D3H41_RS00055 PF02091 Glycyl-tRNA synthetase alpha subunit D3H41_RS00060 PF01169 Uncharacterized protein family UPF0016 D3H41_RS00070 PF01206 Sulfurtransferase TusA D3H41_RS00080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS00080 PF03466 LysR substrate binding domain D3H41_RS00085 PF00107 Zinc-binding dehydrogenase D3H41_RS00085 PF08240 Alcohol dehydrogenase GroES-like domain D3H41_RS00090 PF00108 Thiolase, N-terminal domain D3H41_RS00090 PF02803 Thiolase, C-terminal domain D3H41_RS00095 PF00378 Enoyl-CoA hydratase/isomerase D3H41_RS00095 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D3H41_RS00095 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D3H41_RS00100 PF09186 Domain of unknown function (DUF1949) D3H41_RS00100 PF01205 Uncharacterized protein family UPF0029 D3H41_RS00105 PF02386 Cation transport protein D3H41_RS00110 PF12724 Flavodoxin domain D3H41_RS00145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS00145 PF03466 LysR substrate binding domain D3H41_RS00150 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain D3H41_RS00150 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain D3H41_RS00155 PF04380 Membrane fusogenic activity D3H41_RS00160 PF00873 AcrB/AcrD/AcrF family D3H41_RS00165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D3H41_RS00170 PF00440 Bacterial regulatory proteins, tetR family D3H41_RS00170 PF16295 Tetracyclin repressor-like, C-terminal domain D3H41_RS00175 PF13361 UvrD-like helicase C-terminal domain D3H41_RS00175 PF00580 UvrD/REP helicase N-terminal domain D3H41_RS00180 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D3H41_RS00210 PF13419 Haloacid dehalogenase-like hydrolase D3H41_RS00220 PF00005 ABC transporter D3H41_RS00220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3H41_RS00225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3H41_RS00230 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS00235 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS00235 PF12911 N-terminal TM domain of oligopeptide transport permease C D3H41_RS00270 PF00069 Protein kinase domain D3H41_RS00275 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D3H41_RS00275 PF00356 Bacterial regulatory proteins, lacI family D3H41_RS00280 PF03466 LysR substrate binding domain D3H41_RS00280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS00285 PF00893 Small Multidrug Resistance protein D3H41_RS00290 PF00893 Small Multidrug Resistance protein D3H41_RS00295 PF00920 Dehydratase family D3H41_RS00300 PF01202 Shikimate kinase D3H41_RS00305 PF02447 GntP family permease D3H41_RS00310 PF01081 KDPG and KHG aldolase D3H41_RS00315 PF01048 Phosphorylase superfamily D3H41_RS00320 PF03466 LysR substrate binding domain D3H41_RS00320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS00325 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3H41_RS00325 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D3H41_RS00330 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ D3H41_RS00335 PF01432 Peptidase family M3 D3H41_RS00340 PF01037 Lrp/AsnC ligand binding domain D3H41_RS00345 PF00990 Diguanylate cyclase, GGDEF domain D3H41_RS00345 PF00563 EAL domain D3H41_RS00345 PF08448 PAS fold D3H41_RS00350 PF04445 Putative SAM-dependent methyltransferase D3H41_RS00360 PF00892 EamA-like transporter family D3H41_RS00365 PF00582 Universal stress protein family D3H41_RS00370 PF00210 Ferritin-like domain D3H41_RS00375 PF10625 Universal stress protein B (UspB) D3H41_RS00385 PF01590 GAF domain D3H41_RS00385 PF02954 Bacterial regulatory protein, Fis family D3H41_RS00385 PF00158 Sigma-54 interaction domain D3H41_RS00410 PF00781 Diacylglycerol kinase catalytic domain D3H41_RS00440 PF01594 AI-2E family transporter D3H41_RS00445 PF00563 EAL domain D3H41_RS00445 PF03707 Bacterial signalling protein N terminal repeat D3H41_RS00445 PF00990 Diguanylate cyclase, GGDEF domain D3H41_RS00455 PF02646 RmuC family D3H41_RS00460 PF01209 ubiE/COQ5 methyltransferase family D3H41_RS00465 PF02036 SCP-2 sterol transfer family D3H41_RS00470 PF03109 ABC1 family D3H41_RS00475 PF02416 mttA/Hcf106 family D3H41_RS00480 PF02416 mttA/Hcf106 family D3H41_RS00485 PF00902 Sec-independent protein translocase protein (TatC) D3H41_RS00495 PF01026 TatD related DNase D3H41_RS00505 PF00490 Delta-aminolevulinic acid dehydratase D3H41_RS00510 PF00583 Acetyltransferase (GNAT) family D3H41_RS00520 PF00476 DNA polymerase family A D3H41_RS00520 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D3H41_RS00520 PF01367 5'-3' exonuclease, C-terminal SAM fold D3H41_RS00520 PF01612 3'-5' exonuclease D3H41_RS00525 PF01926 50S ribosome-binding GTPase D3H41_RS00530 PF00034 Cytochrome c D3H41_RS00545 PF04220 Der GTPase activator (YihI) D3H41_RS00550 PF10675 Protein of unknown function (DUF2489) D3H41_RS00555 PF04055 Radical SAM superfamily D3H41_RS00555 PF06969 HemN C-terminal domain D3H41_RS00560 PF00962 Adenosine/AMP deaminase D3H41_RS00565 PF03707 Bacterial signalling protein N terminal repeat D3H41_RS00565 PF00990 Diguanylate cyclase, GGDEF domain D3H41_RS00565 PF00563 EAL domain D3H41_RS00570 PF00158 Sigma-54 interaction domain D3H41_RS00570 PF00072 Response regulator receiver domain D3H41_RS00570 PF02954 Bacterial regulatory protein, Fis family D3H41_RS00575 PF00512 His Kinase A (phospho-acceptor) domain D3H41_RS00575 PF00989 PAS fold D3H41_RS00575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS00585 PF03951 Glutamine synthetase, beta-Grasp domain D3H41_RS00585 PF00120 Glutamine synthetase, catalytic domain D3H41_RS00590 PF00679 Elongation factor G C-terminus D3H41_RS00590 PF00009 Elongation factor Tu GTP binding domain D3H41_RS00590 PF03144 Elongation factor Tu domain 2 D3H41_RS00595 PF00308 Bacterial dnaA protein D3H41_RS00595 PF08299 Bacterial dnaA protein helix-turn-helix D3H41_RS00605 PF03631 Virulence factor BrkB D3H41_RS00610 PF02580 D-Tyr-tRNA(Tyr) deacylase D3H41_RS00615 PF09500 Putative thioesterase (yiiD_Cterm) D3H41_RS00615 PF00583 Acetyltransferase (GNAT) family D3H41_RS00625 PF01293 Phosphoenolpyruvate carboxykinase D3H41_RS00630 PF01430 Hsp33 protein D3H41_RS00635 PF01479 S4 domain D3H41_RS00640 PF11356 Type II secretion system protein C D3H41_RS00645 PF00263 Bacterial type II and III secretion system protein D3H41_RS00645 PF03958 Bacterial type II/III secretion system short domain D3H41_RS00650 PF00437 Type II/IV secretion system protein D3H41_RS00655 PF00482 Type II secretion system (T2SS), protein F D3H41_RS00660 PF07963 Prokaryotic N-terminal methylation motif D3H41_RS00660 PF08334 Type II secretion system (T2SS), protein G D3H41_RS00665 PF12019 Type II transport protein GspH D3H41_RS00670 PF02501 Type II secretion system (T2SS), protein I D3H41_RS00670 PF07963 Prokaryotic N-terminal methylation motif D3H41_RS00675 PF07963 Prokaryotic N-terminal methylation motif D3H41_RS00675 PF11612 Type II secretion system (T2SS), protein J D3H41_RS00680 PF03934 Type II secretion system (T2SS), protein K D3H41_RS00685 PF05134 Type II secretion system (T2SS), protein L D3H41_RS00685 PF12693 GspL periplasmic domain D3H41_RS00690 PF04612 Type II secretion system (T2SS), protein M D3H41_RS00695 PF01203 Type II secretion system (T2SS), protein N D3H41_RS00700 PF00459 Inositol monophosphatase family D3H41_RS00705 PF00293 NUDIX domain D3H41_RS00710 PF01106 NifU-like domain D3H41_RS00710 PF01521 Iron-sulphur cluster biosynthesis D3H41_RS00715 PF00156 Phosphoribosyl transferase domain D3H41_RS00720 PF00561 alpha/beta hydrolase fold D3H41_RS00730 PF17674 HHH domain D3H41_RS00730 PF09371 Tex-like protein N-terminal domain D3H41_RS00730 PF16921 Tex protein YqgF-like domain D3H41_RS00730 PF00575 S1 RNA binding domain D3H41_RS00740 PF03449 Transcription elongation factor, N-terminal D3H41_RS00740 PF01272 Transcription elongation factor, GreA/GreB, C-term D3H41_RS00750 PF00072 Response regulator receiver domain D3H41_RS00750 PF00486 Transcriptional regulatory protein, C terminal D3H41_RS00755 PF00672 HAMP domain D3H41_RS00755 PF00512 His Kinase A (phospho-acceptor) domain D3H41_RS00755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS00760 PF00860 Permease family D3H41_RS00765 PF17191 RecG wedge domain D3H41_RS00765 PF00270 DEAD/DEAH box helicase D3H41_RS00765 PF00271 Helicase conserved C-terminal domain D3H41_RS00770 PF00588 SpoU rRNA Methylase family D3H41_RS00770 PF12105 SpoU, rRNA methylase, C-terminal D3H41_RS00775 PF13291 ACT domain D3H41_RS00775 PF02824 TGS domain D3H41_RS00775 PF04607 Region found in RelA / SpoT proteins D3H41_RS00780 PF01192 RNA polymerase Rpb6 D3H41_RS00785 PF00625 Guanylate kinase D3H41_RS00805 PF02472 Biopolymer transport protein ExbD/TolR D3H41_RS00810 PF01618 MotA/TolQ/ExbB proton channel family D3H41_RS00825 PF07715 TonB-dependent Receptor Plug Domain D3H41_RS00825 PF00593 TonB dependent receptor D3H41_RS00835 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS00840 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS00840 PF12911 N-terminal TM domain of oligopeptide transport permease C D3H41_RS00845 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3H41_RS00850 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3H41_RS00850 PF00005 ABC transporter D3H41_RS00855 PF00005 ABC transporter D3H41_RS00855 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3H41_RS00865 PF00990 Diguanylate cyclase, GGDEF domain D3H41_RS00865 PF00563 EAL domain D3H41_RS00865 PF13426 PAS domain D3H41_RS00900 PF03755 YicC-like family, N-terminal region D3H41_RS00900 PF08340 Domain of unknown function (DUF1732) D3H41_RS00910 PF03725 3' exoribonuclease family, domain 2 D3H41_RS00910 PF01138 3' exoribonuclease family, domain 1 D3H41_RS00915 PF00156 Phosphoribosyl transferase domain D3H41_RS00920 PF03279 Bacterial lipid A biosynthesis acyltransferase D3H41_RS00925 PF00440 Bacterial regulatory proteins, tetR family D3H41_RS00930 PF04127 DNA / pantothenate metabolism flavoprotein D3H41_RS00930 PF02441 Flavoprotein D3H41_RS00940 PF17200 Single Cache domain 2 D3H41_RS00940 PF00672 HAMP domain D3H41_RS00940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_RS00945 PF04002 RadC-like JAB domain D3H41_RS00950 PF00830 Ribosomal L28 family D3H41_RS00955 PF00471 Ribosomal protein L33 D3H41_RS00965 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain D3H41_RS00965 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain D3H41_RS00965 PF06827 Zinc finger found in FPG and IleRS D3H41_RS00970 PF01467 Cytidylyltransferase-like D3H41_RS00975 PF05686 Glycosyl transferase family 90 D3H41_RS00980 PF00535 Glycosyl transferase family 2 D3H41_RS00985 PF00535 Glycosyl transferase family 2 D3H41_RS00990 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D3H41_RS00995 PF01219 Prokaryotic diacylglycerol kinase D3H41_RS01005 PF16363 GDP-mannose 4,6 dehydratase D3H41_RS01010 PF00483 Nucleotidyl transferase D3H41_RS01015 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D3H41_RS01020 PF00668 Condensation domain D3H41_RS01020 PF00975 Thioesterase domain D3H41_RS01020 PF00550 Phosphopantetheine attachment site D3H41_RS01020 PF13193 AMP-binding enzyme C-terminal domain D3H41_RS01020 PF00501 AMP-binding enzyme D3H41_RS01030 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D3H41_RS01030 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D3H41_RS01045 PF00551 Formyl transferase D3H41_RS01045 PF02911 Formyl transferase, C-terminal domain D3H41_RS01055 PF00535 Glycosyl transferase family 2 D3H41_RS01060 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) D3H41_RS01060 PF00534 Glycosyl transferases group 1 D3H41_RS01065 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D3H41_RS01075 PF03279 Bacterial lipid A biosynthesis acyltransferase D3H41_RS01080 PF01370 NAD dependent epimerase/dehydratase family D3H41_RS01085 PF06082 Exopolysaccharide biosynthesis protein YbjH D3H41_RS01120 PF02348 Cytidylyltransferase D3H41_RS01125 PF03102 NeuB family D3H41_RS01125 PF08666 SAF domain D3H41_RS01130 PF02350 UDP-N-acetylglucosamine 2-epimerase D3H41_RS01140 PF01943 Polysaccharide biosynthesis protein D3H41_RS01155 PF00535 Glycosyl transferase family 2 D3H41_RS01160 PF01370 NAD dependent epimerase/dehydratase family D3H41_RS01165 PF02397 Bacterial sugar transferase D3H41_RS01170 PF02719 Polysaccharide biosynthesis protein D3H41_RS01175 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D3H41_RS01175 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D3H41_RS01175 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D3H41_RS01180 PF00483 Nucleotidyl transferase D3H41_RS01185 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain D3H41_RS01185 PF00753 Metallo-beta-lactamase superfamily D3H41_RS01185 PF10996 Beta-Casp domain D3H41_RS01190 PF00121 Triosephosphate isomerase D3H41_RS01215 PF08220 DeoR-like helix-turn-helix domain D3H41_RS01215 PF00455 DeoR C terminal sensor domain D3H41_RS01220 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded D3H41_RS01225 PF06005 Cell division protein ZapB D3H41_RS01230 PF03737 Aldolase/RraA D3H41_RS01235 PF01040 UbiA prenyltransferase family D3H41_RS01240 PF07724 AAA domain (Cdc48 subfamily) D3H41_RS01240 PF00004 ATPase family associated with various cellular activities (AAA) D3H41_RS01245 PF00227 Proteasome subunit D3H41_RS01255 PF00356 Bacterial regulatory proteins, lacI family D3H41_RS01260 PF00270 DEAD/DEAH box helicase D3H41_RS01260 PF00271 Helicase conserved C-terminal domain D3H41_RS01260 PF18074 Primosomal protein N C-terminal domain D3H41_RS01260 PF17764 3′ DNA-binding domain (3′BD) D3H41_RS01260 PF18319 PriA DNA helicase Cys-rich region (CRR) domain D3H41_RS01270 PF01197 Ribosomal protein L31 D3H41_RS01275 PF00338 Ribosomal protein S10p/S20e D3H41_RS01280 PF00297 Ribosomal protein L3 D3H41_RS01285 PF00573 Ribosomal protein L4/L1 family D3H41_RS01290 PF00276 Ribosomal protein L23 D3H41_RS01295 PF03947 Ribosomal Proteins L2, C-terminal domain D3H41_RS01295 PF00181 Ribosomal Proteins L2, RNA binding domain D3H41_RS01300 PF00203 Ribosomal protein S19 D3H41_RS01305 PF00237 Ribosomal protein L22p/L17e D3H41_RS01310 PF07650 KH domain D3H41_RS01310 PF00189 Ribosomal protein S3, C-terminal domain D3H41_RS01315 PF00252 Ribosomal protein L16p/L10e D3H41_RS01320 PF00831 Ribosomal L29 protein D3H41_RS01325 PF00366 Ribosomal protein S17 D3H41_RS01330 PF00238 Ribosomal protein L14p/L23e D3H41_RS01335 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 D3H41_RS01335 PF00467 KOW motif D3H41_RS01340 PF00673 ribosomal L5P family C-terminus D3H41_RS01340 PF00281 Ribosomal protein L5 D3H41_RS01345 PF00253 Ribosomal protein S14p/S29e D3H41_RS01350 PF00410 Ribosomal protein S8 D3H41_RS01355 PF00347 Ribosomal protein L6 D3H41_RS01360 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast D3H41_RS01365 PF03719 Ribosomal protein S5, C-terminal domain D3H41_RS01365 PF00333 Ribosomal protein S5, N-terminal domain D3H41_RS01370 PF00327 Ribosomal protein L30p/L7e D3H41_RS01375 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A D3H41_RS01380 PF00344 SecY translocase D3H41_RS01385 PF00444 Ribosomal protein L36 D3H41_RS01390 PF00416 Ribosomal protein S13/S18 D3H41_RS01395 PF00411 Ribosomal protein S11 D3H41_RS01400 PF00163 Ribosomal protein S4/S9 N-terminal domain D3H41_RS01400 PF01479 S4 domain D3H41_RS01405 PF01000 RNA polymerase Rpb3/RpoA insert domain D3H41_RS01405 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain D3H41_RS01405 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain D3H41_RS01410 PF01196 Ribosomal protein L17 D3H41_RS01420 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D3H41_RS01420 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D3H41_RS01430 PF13673 Acetyltransferase (GNAT) domain D3H41_RS01435 PF00270 DEAD/DEAH box helicase D3H41_RS01435 PF03880 DbpA RNA binding domain D3H41_RS01435 PF00271 Helicase conserved C-terminal domain D3H41_RS01445 PF00149 Calcineurin-like phosphoesterase D3H41_RS01445 PF02872 5'-nucleotidase, C-terminal domain D3H41_RS01450 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D3H41_RS01450 PF14824 Sirohaem biosynthesis protein central D3H41_RS01450 PF10414 Sirohaem synthase dimerisation region D3H41_RS01455 PF01507 Phosphoadenosine phosphosulfate reductase family D3H41_RS01460 PF00009 Elongation factor Tu GTP binding domain D3H41_RS01465 PF03600 Citrate transporter D3H41_RS01465 PF02080 TrkA-C domain D3H41_RS01490 PF00005 ABC transporter D3H41_RS01500 PF10795 Protein of unknown function (DUF2607) D3H41_RS01505 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) D3H41_RS01510 PF06526 Protein of unknown function (DUF1107) D3H41_RS01515 PF01625 Peptide methionine sulfoxide reductase D3H41_RS01520 PF17243 POTRA domain TamA domain 1 D3H41_RS01520 PF01103 Surface antigen D3H41_RS01520 PF07244 Surface antigen variable number repeat D3H41_RS01525 PF04357 TamB, inner membrane protein subunit of TAM complex D3H41_RS01530 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like D3H41_RS01540 PF00719 Inorganic pyrophosphatase D3H41_RS01545 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain D3H41_RS01555 PF02875 Mur ligase family, glutamate ligase domain D3H41_RS01555 PF01225 Mur ligase family, catalytic domain D3H41_RS01555 PF08245 Mur ligase middle domain D3H41_RS01560 PF02441 Flavoprotein D3H41_RS01570 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS01575 PF00005 ABC transporter D3H41_RS01580 PF03466 LysR substrate binding domain D3H41_RS01580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS01585 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D3H41_RS01605 PF16868 NMT1-like family D3H41_RS01615 PF01316 Arginine repressor, DNA binding domain D3H41_RS01615 PF02863 Arginine repressor, C-terminal domain D3H41_RS01620 PF00056 lactate/malate dehydrogenase, NAD binding domain D3H41_RS01620 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain D3H41_RS01630 PF00348 Polyprenyl synthetase D3H41_RS01635 PF00829 Ribosomal prokaryotic L21 protein D3H41_RS01640 PF01016 Ribosomal L27 protein D3H41_RS01645 PF01926 50S ribosome-binding GTPase D3H41_RS01645 PF01018 GTP1/OBG D3H41_RS01650 PF06738 Putative threonine/serine exporter D3H41_RS01655 PF12821 Threonine/Serine exporter, ThrE D3H41_RS01660 PF00186 Dihydrofolate reductase D3H41_RS01665 PF00149 Calcineurin-like phosphoesterase D3H41_RS01670 PF04379 ApaG domain D3H41_RS01675 PF00398 Ribosomal RNA adenine dimethylase D3H41_RS01680 PF04166 Pyridoxal phosphate biosynthetic protein PdxA D3H41_RS01685 PF09312 SurA N-terminal domain D3H41_RS01690 PF04453 LPS transport system D D3H41_RS01690 PF03968 OstA-like protein D3H41_RS01695 PF00226 DnaJ domain D3H41_RS01695 PF05099 Tellurite resistance protein TerB D3H41_RS01705 PF00694 Aconitase C-terminal domain D3H41_RS01710 PF00330 Aconitase family (aconitate hydratase) D3H41_RS01715 PF00180 Isocitrate/isopropylmalate dehydrogenase D3H41_RS01720 PF00682 HMGL-like D3H41_RS01720 PF08502 LeuA allosteric (dimerisation) domain D3H41_RS01735 PF01569 PAP2 superfamily D3H41_RS01745 PF03466 LysR substrate binding domain D3H41_RS01745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS01750 PF00501 AMP-binding enzyme D3H41_RS01755 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D3H41_RS01755 PF00205 Thiamine pyrophosphate enzyme, central domain D3H41_RS01755 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D3H41_RS01760 PF10369 Small subunit of acetolactate synthase D3H41_RS01765 PF00990 Diguanylate cyclase, GGDEF domain D3H41_RS01775 PF02887 Pyruvate kinase, alpha/beta domain D3H41_RS01775 PF00224 Pyruvate kinase, barrel domain D3H41_RS01780 PF08220 DeoR-like helix-turn-helix domain D3H41_RS01780 PF00455 DeoR C terminal sensor domain D3H41_RS01785 PF01380 SIS domain D3H41_RS01790 PF00465 Iron-containing alcohol dehydrogenase D3H41_RS01795 PF02733 Dak1 domain D3H41_RS01800 PF02734 DAK2 domain D3H41_RS01805 PF05524 PEP-utilising enzyme, N-terminal D3H41_RS01805 PF00391 PEP-utilising enzyme, mobile domain D3H41_RS01805 PF02896 PEP-utilising enzyme, TIM barrel domain D3H41_RS01810 PF00158 Sigma-54 interaction domain D3H41_RS01810 PF02954 Bacterial regulatory protein, Fis family D3H41_RS01810 PF00989 PAS fold D3H41_RS01815 PF05068 Mannitol repressor D3H41_RS01820 PF01232 Mannitol dehydrogenase Rossmann domain D3H41_RS01820 PF08125 Mannitol dehydrogenase C-terminal domain D3H41_RS01825 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D3H41_RS01825 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D3H41_RS01825 PF02378 Phosphotransferase system, EIIC D3H41_RS01850 PF03180 NLPA lipoprotein D3H41_RS01860 PF03979 Sigma-70 factor, region 1.1 D3H41_RS01860 PF00140 Sigma-70 factor, region 1.2 D3H41_RS01860 PF04542 Sigma-70 region 2 D3H41_RS01860 PF04539 Sigma-70 region 3 D3H41_RS01860 PF04545 Sigma-70, region 4 D3H41_RS01860 PF04546 Sigma-70, non-essential region D3H41_RS01865 PF10410 DnaB-helicase binding domain of primase D3H41_RS01865 PF08278 DNA primase DnaG DnaB-binding D3H41_RS01865 PF08275 DNA primase catalytic core, N-terminal domain D3H41_RS01865 PF01807 CHC2 zinc finger D3H41_RS01870 PF09424 Yqey-like protein D3H41_RS01875 PF01165 Ribosomal protein S21 D3H41_RS01880 PF00814 Glycoprotease family D3H41_RS01885 PF00561 alpha/beta hydrolase fold D3H41_RS01890 PF02660 Glycerol-3-phosphate acyltransferase D3H41_RS01895 PF02152 Dihydroneopterin aldolase D3H41_RS01900 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) D3H41_RS01905 PF02673 Bacitracin resistance protein BacA D3H41_RS01910 PF12627 Probable RNA and SrmB- binding site of polymerase A D3H41_RS01910 PF01966 HD domain D3H41_RS01910 PF01743 Poly A polymerase head domain D3H41_RS01915 PF01471 Putative peptidoglycan binding domain D3H41_RS01915 PF13401 AAA domain D3H41_RS01930 PF08239 Bacterial SH3 domain D3H41_RS01935 PF01384 Phosphate transporter family D3H41_RS01940 PF01865 Protein of unknown function DUF47 D3H41_RS01945 PF01928 CYTH domain D3H41_RS01955 PF02743 Cache domain D3H41_RS01955 PF00672 HAMP domain D3H41_RS01955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_RS01960 PF08335 GlnD PII-uridylyltransferase D3H41_RS01960 PF03710 Glutamate-ammonia ligase adenylyltransferase D3H41_RS01965 PF01467 Cytidylyltransferase-like D3H41_RS01965 PF00294 pfkB family carbohydrate kinase D3H41_RS01970 PF02321 Outer membrane efflux protein D3H41_RS01975 PF00293 NUDIX domain D3H41_RS01980 PF06853 Protein of unknown function (DUF1249) D3H41_RS01985 PF00149 Calcineurin-like phosphoesterase D3H41_RS01990 PF05728 Uncharacterised protein family (UPF0227) D3H41_RS01995 PF01751 Toprim domain D3H41_RS01995 PF00986 DNA gyrase B subunit, carboxyl terminus D3H41_RS01995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS01995 PF00204 DNA gyrase B D3H41_RS02000 PF00521 DNA gyrase/topoisomerase IV, subunit A D3H41_RS02000 PF03989 DNA gyrase C-terminal domain, beta-propeller D3H41_RS02005 PF13180 PDZ domain D3H41_RS02010 PF00595 PDZ domain D3H41_RS02015 PF06295 Protein of unknown function (DUF1043) D3H41_RS02025 PF03969 AFG1-like ATPase D3H41_RS02035 PF00572 Ribosomal protein L13 D3H41_RS02040 PF00380 Ribosomal protein S9/S16 D3H41_RS02045 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal D3H41_RS02045 PF00355 Rieske [2Fe-2S] domain D3H41_RS02050 PF00033 Cytochrome b/b6/petB D3H41_RS02050 PF00032 Cytochrome b(C-terminal)/b6/petD D3H41_RS02055 PF02167 Cytochrome C1 family D3H41_RS02060 PF00043 Glutathione S-transferase, C-terminal domain D3H41_RS02060 PF02798 Glutathione S-transferase, N-terminal domain D3H41_RS02065 PF04386 Stringent starvation protein B D3H41_RS02070 PF04972 BON domain D3H41_RS02075 PF13580 SIS domain D3H41_RS02080 PF02021 Uncharacterised protein family UPF0102 D3H41_RS02085 PF04348 LppC putative lipoprotein D3H41_RS02090 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D3H41_RS02105 PF01795 MraW methylase family D3H41_RS02110 PF04999 Cell division protein FtsL D3H41_RS02115 PF03717 Penicillin-binding Protein dimerisation domain D3H41_RS02115 PF00905 Penicillin binding protein transpeptidase domain D3H41_RS02120 PF02875 Mur ligase family, glutamate ligase domain D3H41_RS02120 PF01225 Mur ligase family, catalytic domain D3H41_RS02120 PF08245 Mur ligase middle domain D3H41_RS02125 PF02875 Mur ligase family, glutamate ligase domain D3H41_RS02125 PF01225 Mur ligase family, catalytic domain D3H41_RS02125 PF08245 Mur ligase middle domain D3H41_RS02130 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 D3H41_RS02130 PF00953 Glycosyl transferase family 4 D3H41_RS02135 PF08245 Mur ligase middle domain D3H41_RS02135 PF02875 Mur ligase family, glutamate ligase domain D3H41_RS02140 PF01098 Cell cycle protein D3H41_RS02145 PF04101 Glycosyltransferase family 28 C-terminal domain D3H41_RS02145 PF03033 Glycosyltransferase family 28 N-terminal domain D3H41_RS02150 PF02875 Mur ligase family, glutamate ligase domain D3H41_RS02150 PF01225 Mur ligase family, catalytic domain D3H41_RS02150 PF08245 Mur ligase middle domain D3H41_RS02155 PF08478 POTRA domain, FtsQ-type D3H41_RS02155 PF03799 Cell division protein FtsQ D3H41_RS02160 PF02491 SHS2 domain inserted in FTSA D3H41_RS02165 PF12327 FtsZ family, C-terminal domain D3H41_RS02165 PF00091 Tubulin/FtsZ family, GTPase domain D3H41_RS02170 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase D3H41_RS02180 PF01043 SecA preprotein cross-linking domain D3H41_RS02180 PF07517 SecA DEAD-like domain D3H41_RS02180 PF07516 SecA Wing and Scaffold domain D3H41_RS02180 PF02810 SEC-C motif D3H41_RS02185 PF00293 NUDIX domain D3H41_RS02190 PF05173 Dihydrodipicolinate reductase, C-terminus D3H41_RS02190 PF01113 Dihydrodipicolinate reductase, N-terminus D3H41_RS02195 PF00117 Glutamine amidotransferase class-I D3H41_RS02195 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain D3H41_RS02200 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D3H41_RS02200 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain D3H41_RS02200 PF02142 MGS-like domain D3H41_RS02215 PF01925 Sulfite exporter TauE/SafE D3H41_RS02220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS02220 PF03466 LysR substrate binding domain D3H41_RS02225 PF03458 UPF0126 domain D3H41_RS02230 PF01497 Periplasmic binding protein D3H41_RS02235 PF03186 CobD/Cbib protein D3H41_RS02235 PF17113 Regulatory signalling modulator protein AmpE D3H41_RS02240 PF01048 Phosphorylase superfamily D3H41_RS02250 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3H41_RS02250 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D3H41_RS02255 PF01493 GXGXG motif D3H41_RS02255 PF01645 Conserved region in glutamate synthase D3H41_RS02255 PF00310 Glutamine amidotransferases class-II D3H41_RS02255 PF04898 Glutamate synthase central domain D3H41_RS02260 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D3H41_RS02260 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3H41_RS02265 PF04898 Glutamate synthase central domain D3H41_RS02265 PF00310 Glutamine amidotransferases class-II D3H41_RS02265 PF01493 GXGXG motif D3H41_RS02265 PF01645 Conserved region in glutamate synthase D3H41_RS02270 PF16199 Radical_SAM C-terminal domain D3H41_RS02270 PF04055 Radical SAM superfamily D3H41_RS02275 PF00360 Phytochrome region D3H41_RS02275 PF00990 Diguanylate cyclase, GGDEF domain D3H41_RS02275 PF00563 EAL domain D3H41_RS02275 PF01590 GAF domain D3H41_RS02280 PF01627 Hpt domain D3H41_RS02280 PF00989 PAS fold D3H41_RS02280 PF00072 Response regulator receiver domain D3H41_RS02280 PF00512 His Kinase A (phospho-acceptor) domain D3H41_RS02280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS02280 PF18415 Histidine kinase receptor ArcB trans-membrane domain D3H41_RS02290 PF00072 Response regulator receiver domain D3H41_RS02290 PF00486 Transcriptional regulatory protein, C terminal D3H41_RS02305 PF03737 Aldolase/RraA D3H41_RS02320 PF03447 Homoserine dehydrogenase, NAD binding domain D3H41_RS02320 PF00742 Homoserine dehydrogenase D3H41_RS02320 PF13840 ACT domain D3H41_RS02320 PF01842 ACT domain D3H41_RS02320 PF00696 Amino acid kinase family D3H41_RS02325 PF08544 GHMP kinases C terminal D3H41_RS02325 PF00288 GHMP kinases N terminal domain D3H41_RS02330 PF00291 Pyridoxal-phosphate dependent enzyme D3H41_RS02330 PF14821 Threonine synthase N terminus D3H41_RS02340 PF01228 Glycine radical D3H41_RS02345 PF01261 Xylose isomerase-like TIM barrel D3H41_RS02355 PF03167 Uracil DNA glycosylase superfamily D3H41_RS02370 PF01235 Sodium:alanine symporter family D3H41_RS02375 PF03883 Peroxide stress protein YaaA D3H41_RS02380 PF00271 Helicase conserved C-terminal domain D3H41_RS02380 PF00270 DEAD/DEAH box helicase D3H41_RS02385 PF05175 Methyltransferase small domain D3H41_RS02390 PF05525 Branched-chain amino acid transport protein D3H41_RS02395 PF00258 Flavodoxin D3H41_RS02400 PF00589 Phage integrase family D3H41_RS02400 PF02899 Phage integrase, N-terminal SAM-like domain D3H41_RS02405 PF13098 Thioredoxin-like domain D3H41_RS02405 PF10411 Disulfide bond isomerase protein N-terminus D3H41_RS02410 PF17768 RecJ OB domain D3H41_RS02410 PF02272 DHHA1 domain D3H41_RS02410 PF01368 DHH family D3H41_RS02420 PF00152 tRNA synthetases class II (D, K and N) D3H41_RS02420 PF01336 OB-fold nucleic acid binding domain D3H41_RS02425 PF02954 Bacterial regulatory protein, Fis family D3H41_RS02425 PF00072 Response regulator receiver domain D3H41_RS02425 PF00158 Sigma-54 interaction domain D3H41_RS02435 PF00248 Aldo/keto reductase family D3H41_RS02445 PF02976 DNA mismatch repair enzyme MutH D3H41_RS02450 PF00293 NUDIX domain D3H41_RS02455 PF02896 PEP-utilising enzyme, TIM barrel domain D3H41_RS02455 PF00391 PEP-utilising enzyme, mobile domain D3H41_RS02455 PF05524 PEP-utilising enzyme, N-terminal D3H41_RS02455 PF01590 GAF domain D3H41_RS02460 PF01925 Sulfite exporter TauE/SafE D3H41_RS02465 PF01790 Prolipoprotein diacylglyceryl transferase D3H41_RS02470 PF00303 Thymidylate synthase D3H41_RS02480 PF02690 Na+/Pi-cotransporter D3H41_RS02485 PF03466 LysR substrate binding domain D3H41_RS02485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS02490 PF01022 Bacterial regulatory protein, arsR family D3H41_RS02495 PF01649 Ribosomal protein S20 D3H41_RS02500 PF03023 Lipid II flippase MurJ D3H41_RS02505 PF01687 Riboflavin kinase D3H41_RS02505 PF06574 FAD synthetase D3H41_RS02510 PF08264 Anticodon-binding domain of tRNA D3H41_RS02510 PF06827 Zinc finger found in FPG and IleRS D3H41_RS02510 PF00133 tRNA synthetases class I (I, L, M and V) D3H41_RS02515 PF01252 Signal peptidase (SPase) II D3H41_RS02520 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D3H41_RS02525 PF02401 LytB protein D3H41_RS02535 PF04397 LytTr DNA-binding domain D3H41_RS02535 PF00072 Response regulator receiver domain D3H41_RS02540 PF07694 5TMR of 5TMR-LYT D3H41_RS02540 PF06580 Histidine kinase D3H41_RS02545 PF02554 Carbon starvation protein CstA D3H41_RS02560 PF01380 SIS domain D3H41_RS02565 PF03702 Anhydro-N-acetylmuramic acid kinase D3H41_RS02570 PF00933 Glycosyl hydrolase family 3 N terminal domain D3H41_RS02575 PF00793 DAHP synthetase I family D3H41_RS02580 PF02153 Prephenate dehydrogenase D3H41_RS02580 PF01817 Chorismate mutase type II D3H41_RS02585 PF04225 Opacity-associated protein A LysM-like domain D3H41_RS02585 PF01551 Peptidase family M23 D3H41_RS02590 PF07238 PilZ domain D3H41_RS02595 PF00005 ABC transporter D3H41_RS02595 PF12848 ABC transporter D3H41_RS02600 PF01464 Transglycosylase SLT domain D3H41_RS02600 PF14718 Soluble lytic murein transglycosylase L domain D3H41_RS02605 PF01371 Trp repressor protein D3H41_RS02610 PF01931 Protein of unknown function DUF84 D3H41_RS02615 PF01817 Chorismate mutase type II D3H41_RS02615 PF00800 Prephenate dehydratase D3H41_RS02620 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein D3H41_RS02625 PF01464 Transglycosylase SLT domain D3H41_RS02625 PF00497 Bacterial extracellular solute-binding proteins, family 3 D3H41_RS02630 PF13525 Outer membrane lipoprotein D3H41_RS02635 PF00849 RNA pseudouridylate synthase D3H41_RS02635 PF01479 S4 domain D3H41_RS02640 PF02578 Multi-copper polyphenol oxidoreductase laccase D3H41_RS02645 PF00004 ATPase family associated with various cellular activities (AAA) D3H41_RS02645 PF07724 AAA domain (Cdc48 subfamily) D3H41_RS02645 PF17871 AAA lid domain D3H41_RS02645 PF10431 C-terminal, D2-small domain, of ClpB protein D3H41_RS02645 PF02861 Clp amino terminal domain, pathogenicity island component D3H41_RS02695 PF03411 Penicillin-insensitive murein endopeptidase D3H41_RS02705 PF00037 4Fe-4S binding domain D3H41_RS02710 PF01136 Peptidase family U32 D3H41_RS02710 PF16325 Peptidase family U32 C-terminal domain D3H41_RS02715 PF04381 Putative exonuclease, RdgC D3H41_RS02725 PF00072 Response regulator receiver domain D3H41_RS02725 PF00486 Transcriptional regulatory protein, C terminal D3H41_RS02730 PF00989 PAS fold D3H41_RS02730 PF00512 His Kinase A (phospho-acceptor) domain D3H41_RS02730 PF11808 Phosphate regulon sensor protein PhoR D3H41_RS02730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS02735 PF12849 PBP superfamily domain D3H41_RS02745 PF02541 Ppx/GppA phosphatase family D3H41_RS02750 PF13090 Polyphosphate kinase C-terminal domain 2 D3H41_RS02750 PF13089 Polyphosphate kinase N-terminal domain D3H41_RS02750 PF17941 Polyphosphate kinase C-terminal domain 1 D3H41_RS02750 PF02503 Polyphosphate kinase middle domain D3H41_RS02755 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS02760 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS02765 PF00005 ABC transporter D3H41_RS02770 PF01895 PhoU domain D3H41_RS02775 PF03976 Polyphosphate kinase 2 (PPK2) D3H41_RS02780 PF03932 CutC family D3H41_RS02790 PF00578 AhpC/TSA family D3H41_RS02790 PF10417 C-terminal domain of 1-Cys peroxiredoxin D3H41_RS02795 PF03466 LysR substrate binding domain D3H41_RS02795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS02800 PF01274 Malate synthase D3H41_RS02805 PF00463 Isocitrate lyase family D3H41_RS02810 PF00571 CBS domain D3H41_RS02820 PF02547 Queuosine biosynthesis protein D3H41_RS02825 PF01702 Queuine tRNA-ribosyltransferase D3H41_RS02830 PF02699 Preprotein translocase subunit D3H41_RS02835 PF02355 Protein export membrane protein D3H41_RS02835 PF13721 SecD export protein N-terminal TM region D3H41_RS02835 PF07549 SecD/SecF GG Motif D3H41_RS02840 PF02355 Protein export membrane protein D3H41_RS02840 PF07549 SecD/SecF GG Motif D3H41_RS02855 PF00459 Inositol monophosphatase family D3H41_RS02860 PF00588 SpoU rRNA Methylase family D3H41_RS02865 PF02082 Transcriptional regulator D3H41_RS02870 PF00266 Aminotransferase class-V D3H41_RS02875 PF01592 NifU-like N terminal domain D3H41_RS02880 PF01521 Iron-sulphur cluster biosynthesis D3H41_RS02885 PF00226 DnaJ domain D3H41_RS02885 PF07743 HSCB C-terminal oligomerisation domain D3H41_RS02890 PF00012 Hsp70 protein D3H41_RS02895 PF00111 2Fe-2S iron-sulfur cluster binding domain D3H41_RS02900 PF04384 Iron-sulphur cluster assembly D3H41_RS02905 PF12404 Peptidase D3H41_RS02905 PF00883 Cytosol aminopeptidase family, catalytic domain D3H41_RS02910 PF00334 Nucleoside diphosphate kinase D3H41_RS02915 PF04055 Radical SAM superfamily D3H41_RS02920 PF13464 Domain of unknown function (DUF4115) D3H41_RS02925 PF04551 GcpE protein D3H41_RS02930 PF13393 Histidyl-tRNA synthetase D3H41_RS02930 PF03129 Anticodon binding domain D3H41_RS02935 PF09976 Tetratricopeptide repeat-like domain D3H41_RS02940 PF13360 PQQ-like domain D3H41_RS02945 PF01926 50S ribosome-binding GTPase D3H41_RS02945 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal D3H41_RS02960 PF13742 OB-fold nucleic acid binding domain D3H41_RS02960 PF02601 Exonuclease VII, large subunit D3H41_RS02965 PF00478 IMP dehydrogenase / GMP reductase domain D3H41_RS02965 PF00571 CBS domain D3H41_RS02970 PF00117 Glutamine amidotransferase class-I D3H41_RS02970 PF02540 NAD synthase D3H41_RS02970 PF00958 GMP synthase C terminal domain D3H41_RS02975 PF13356 Arm DNA-binding domain D3H41_RS02975 PF00589 Phage integrase family D3H41_RS03015 PF03432 Relaxase/Mobilisation nuclease domain D3H41_RS03015 PF18821 Large polyvalent protein-associated domain 7 D3H41_RS03080 PF07690 Major Facilitator Superfamily D3H41_RS03085 PF00440 Bacterial regulatory proteins, tetR family D3H41_RS03085 PF02909 Tetracyclin repressor-like, C-terminal domain D3H41_RS03100 PF00186 Dihydrofolate reductase D3H41_RS03120 PF07690 Major Facilitator Superfamily D3H41_RS03135 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D3H41_RS03135 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D3H41_RS03135 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D3H41_RS03135 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D3H41_RS03140 PF00809 Pterin binding enzyme D3H41_RS03150 PF03553 Na+/H+ antiporter family D3H41_RS03155 PF06483 Chitinase C D3H41_RS03155 PF00704 Glycosyl hydrolases family 18 D3H41_RS03160 PF01184 GPR1/FUN34/yaaH family D3H41_RS03165 PF01235 Sodium:alanine symporter family D3H41_RS03170 PF01266 FAD dependent oxidoreductase D3H41_RS03180 PF01053 Cys/Met metabolism PLP-dependent enzyme D3H41_RS03185 PF00202 Aminotransferase class-III D3H41_RS03205 PF00795 Carbon-nitrogen hydrolase D3H41_RS03205 PF00583 Acetyltransferase (GNAT) family D3H41_RS03210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS03210 PF03466 LysR substrate binding domain D3H41_RS03235 PF01668 SmpB protein D3H41_RS03240 PF03364 Polyketide cyclase / dehydrase and lipid transport D3H41_RS03245 PF03658 RnfH family Ubiquitin D3H41_RS03250 PF04355 SmpA / OmlA family D3H41_RS03260 PF02463 RecF/RecN/SMC N terminal domain D3H41_RS03270 PF01513 ATP-NAD kinase D3H41_RS03275 PF01025 GrpE D3H41_RS03280 PF00375 Sodium:dicarboxylate symporter family D3H41_RS03285 PF00012 Hsp70 protein D3H41_RS03290 PF00684 DnaJ central domain D3H41_RS03290 PF01556 DnaJ C terminal domain D3H41_RS03290 PF00226 DnaJ domain D3H41_RS03320 PF03806 AbgT putative transporter family D3H41_RS03325 PF14437 MafB19-like deaminase D3H41_RS03335 PF00497 Bacterial extracellular solute-binding proteins, family 3 D3H41_RS03335 PF01464 Transglycosylase SLT domain D3H41_RS03340 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain D3H41_RS03340 PF02769 AIR synthase related protein, C-terminal domain D3H41_RS03340 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal D3H41_RS03355 PF07715 TonB-dependent Receptor Plug Domain D3H41_RS03355 PF00593 TonB dependent receptor D3H41_RS03370 PF07687 Peptidase dimerisation domain D3H41_RS03370 PF01546 Peptidase family M20/M25/M40 D3H41_RS03375 PF00860 Permease family D3H41_RS03380 PF00156 Phosphoribosyl transferase domain D3H41_RS03385 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) D3H41_RS03390 PF07417 Sigma factor-binding transcriptional regulator Crl D3H41_RS03395 PF01472 PUA domain D3H41_RS03395 PF00696 Amino acid kinase family D3H41_RS03400 PF00171 Aldehyde dehydrogenase family D3H41_RS03405 PF03477 ATP cone domain D3H41_RS03410 PF01872 RibD C-terminal domain D3H41_RS03410 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D3H41_RS03415 PF00677 Lumazine binding domain D3H41_RS03420 PF00925 GTP cyclohydrolase II D3H41_RS03420 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D3H41_RS03425 PF00885 6,7-dimethyl-8-ribityllumazine synthase D3H41_RS03430 PF01029 NusB family D3H41_RS03435 PF00586 AIR synthase related protein, N-terminal domain D3H41_RS03435 PF02769 AIR synthase related protein, C-terminal domain D3H41_RS03440 PF04608 Phosphatidylglycerophosphatase A D3H41_RS03445 PF02780 Transketolase, C-terminal domain D3H41_RS03445 PF02779 Transketolase, pyrimidine binding domain D3H41_RS03445 PF13292 1-deoxy-D-xylulose-5-phosphate synthase D3H41_RS03450 PF00348 Polyprenyl synthetase D3H41_RS03455 PF02609 Exonuclease VII small subunit D3H41_RS03460 PF01618 MotA/TolQ/ExbB proton channel family D3H41_RS03465 PF13677 Membrane MotB of proton-channel complex MotA/MotB D3H41_RS03465 PF00691 OmpA family D3H41_RS03470 PF02568 Thiamine biosynthesis protein (ThiI) D3H41_RS03470 PF02926 THUMP domain D3H41_RS03475 PF03466 LysR substrate binding domain D3H41_RS03475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS03485 PF04241 Protein of unknown function (DUF423) D3H41_RS03490 PF01728 FtsJ-like methyltransferase D3H41_RS03490 PF18125 RlmM ferredoxin-like domain D3H41_RS03495 PF01367 5'-3' exonuclease, C-terminal SAM fold D3H41_RS03495 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D3H41_RS03500 PF03641 Possible lysine decarboxylase D3H41_RS03500 PF11892 Domain of unknown function (DUF3412) D3H41_RS03500 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases D3H41_RS03505 PF00990 Diguanylate cyclase, GGDEF domain D3H41_RS03515 PF14489 QueF-like protein D3H41_RS03515 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term D3H41_RS03520 PF07348 Syd protein (SUKH-2) D3H41_RS03525 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) D3H41_RS03530 PF03180 NLPA lipoprotein D3H41_RS03535 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS03540 PF09383 NIL domain D3H41_RS03540 PF00005 ABC transporter D3H41_RS03550 PF00356 Bacterial regulatory proteins, lacI family D3H41_RS03555 PF00367 phosphotransferase system, EIIB D3H41_RS03555 PF02378 Phosphotransferase system, EIIC D3H41_RS03560 PF16657 Maltogenic Amylase, C-terminal domain D3H41_RS03560 PF00128 Alpha amylase, catalytic domain D3H41_RS03575 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 D3H41_RS03575 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) D3H41_RS03580 PF00464 Serine hydroxymethyltransferase D3H41_RS03585 PF04055 Radical SAM superfamily D3H41_RS03585 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family D3H41_RS03590 PF03099 Biotin/lipoate A/B protein ligase family D3H41_RS03595 PF04359 Protein of unknown function (DUF493) D3H41_RS03600 PF07943 Penicillin-binding protein 5, C-terminal domain D3H41_RS03600 PF00768 D-alanyl-D-alanine carboxypeptidase D3H41_RS03605 PF05036 Sporulation related domain D3H41_RS03605 PF03330 Lytic transglycolase D3H41_RS03610 PF01098 Cell cycle protein D3H41_RS03615 PF00905 Penicillin binding protein transpeptidase domain D3H41_RS03615 PF03717 Penicillin-binding Protein dimerisation domain D3H41_RS03620 PF02590 Predicted SPOUT methyltransferase D3H41_RS03630 PF06144 DNA polymerase III, delta subunit D3H41_RS03630 PF14840 Processivity clamp loader gamma complex DNA pol III C-term D3H41_RS03635 PF04390 Lipopolysaccharide-assembly D3H41_RS03640 PF13603 Leucyl-tRNA synthetase, Domain 2 D3H41_RS03640 PF08264 Anticodon-binding domain of tRNA D3H41_RS03640 PF00133 tRNA synthetases class I (I, L, M and V) D3H41_RS03645 PF07295 Zinc-ribbon containing domain D3H41_RS03650 PF00795 Carbon-nitrogen hydrolase D3H41_RS03655 PF03471 Transporter associated domain D3H41_RS03655 PF00571 CBS domain D3H41_RS03660 PF02130 Uncharacterized protein family UPF0054 D3H41_RS03665 PF02562 PhoH-like protein D3H41_RS03670 PF01938 TRAM domain D3H41_RS03670 PF00919 Uncharacterized protein family UPF0004 D3H41_RS03670 PF04055 Radical SAM superfamily D3H41_RS03680 PF01494 FAD binding domain D3H41_RS03790 PF06071 Protein of unknown function (DUF933) D3H41_RS03790 PF01926 50S ribosome-binding GTPase D3H41_RS03795 PF01195 Peptidyl-tRNA hydrolase D3H41_RS03800 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase D3H41_RS03800 PF14572 Phosphoribosyl synthetase-associated domain D3H41_RS03805 PF08544 GHMP kinases C terminal D3H41_RS03805 PF00288 GHMP kinases N terminal domain D3H41_RS03810 PF03550 Outer membrane lipoprotein LolB D3H41_RS03815 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain D3H41_RS03815 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain D3H41_RS03815 PF01488 Shikimate / quinate 5-dehydrogenase D3H41_RS03820 PF03462 PCRF domain D3H41_RS03820 PF00472 RF-1 domain D3H41_RS03825 PF13847 Methyltransferase domain D3H41_RS03825 PF17827 PrmC N-terminal domain D3H41_RS03830 PF04247 Invasion gene expression up-regulator, SirB D3H41_RS03835 PF13369 Transglutaminase-like superfamily D3H41_RS03840 PF00793 DAHP synthetase I family D3H41_RS03845 PF00149 Calcineurin-like phosphoesterase D3H41_RS03845 PF02872 5'-nucleotidase, C-terminal domain D3H41_RS03850 PF04073 Aminoacyl-tRNA editing domain D3H41_RS03855 PF00849 RNA pseudouridylate synthase D3H41_RS03855 PF01479 S4 domain D3H41_RS03860 PF01713 Smr domain D3H41_RS03885 PF03173 Putative carbohydrate binding domain D3H41_RS03885 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain D3H41_RS03885 PF00728 Glycosyl hydrolase family 20, catalytic domain D3H41_RS03885 PF02838 Glycosyl hydrolase family 20, domain 2 D3H41_RS03900 PF00403 Heavy-metal-associated domain D3H41_RS03915 PF13609 Gram-negative porin D3H41_RS03920 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) D3H41_RS03925 PF00749 tRNA synthetases class I (E and Q), catalytic domain D3H41_RS03930 PF00691 OmpA family D3H41_RS03930 PF01389 OmpA-like transmembrane domain D3H41_RS03975 PF00072 Response regulator receiver domain D3H41_RS03975 PF01584 CheW-like domain D3H41_RS03980 PF01739 CheR methyltransferase, SAM binding domain D3H41_RS03980 PF03705 CheR methyltransferase, all-alpha domain D3H41_RS03985 PF00460 Flagella basal body rod protein D3H41_RS03990 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D3H41_RS03990 PF00460 Flagella basal body rod protein D3H41_RS03995 PF03963 Flagellar hook capping protein - N-terminal region D3H41_RS03995 PF13860 FlgD Ig-like domain D3H41_RS03995 PF13861 FlgD Tudor-like domain D3H41_RS04000 PF07559 Flagellar basal body protein FlaE D3H41_RS04000 PF00460 Flagella basal body rod protein D3H41_RS04000 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D3H41_RS04005 PF00460 Flagella basal body rod protein D3H41_RS04005 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D3H41_RS04010 PF00460 Flagella basal body rod protein D3H41_RS04010 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D3H41_RS04015 PF02107 Flagellar L-ring protein D3H41_RS04020 PF02119 Flagellar P-ring protein D3H41_RS04025 PF10135 Rod binding protein D3H41_RS04025 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase D3H41_RS04030 PF07196 Flagellin hook IN motif D3H41_RS04030 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D3H41_RS04035 PF00669 Bacterial flagellin N-terminal helical region D3H41_RS04040 PF00700 Bacterial flagellin C-terminal helical region D3H41_RS04040 PF07196 Flagellin hook IN motif D3H41_RS04040 PF00669 Bacterial flagellin N-terminal helical region D3H41_RS04050 PF00700 Bacterial flagellin C-terminal helical region D3H41_RS04050 PF00669 Bacterial flagellin N-terminal helical region D3H41_RS04050 PF07196 Flagellin hook IN motif D3H41_RS04055 PF00669 Bacterial flagellin N-terminal helical region D3H41_RS04055 PF00700 Bacterial flagellin C-terminal helical region D3H41_RS04055 PF07196 Flagellin hook IN motif D3H41_RS04065 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D3H41_RS04070 PF02896 PEP-utilising enzyme, TIM barrel domain D3H41_RS04070 PF00391 PEP-utilising enzyme, mobile domain D3H41_RS04070 PF05524 PEP-utilising enzyme, N-terminal D3H41_RS04075 PF00381 PTS HPr component phosphorylation site D3H41_RS04085 PF00291 Pyridoxal-phosphate dependent enzyme D3H41_RS04095 PF04354 ZipA, C-terminal FtsZ-binding domain D3H41_RS04100 PF12826 Helix-hairpin-helix motif D3H41_RS04100 PF03119 NAD-dependent DNA ligase C4 zinc finger domain D3H41_RS04100 PF01653 NAD-dependent DNA ligase adenylation domain D3H41_RS04100 PF00533 BRCA1 C Terminus (BRCT) domain D3H41_RS04100 PF03120 NAD-dependent DNA ligase OB-fold domain D3H41_RS04105 PF03573 outer membrane porin, OprD family D3H41_RS04125 PF16200 C-terminal region of band_7 D3H41_RS04125 PF01145 SPFH domain / Band 7 family D3H41_RS04130 PF00085 Thioredoxin D3H41_RS04140 PF00106 short chain dehydrogenase D3H41_RS04145 PF01370 NAD dependent epimerase/dehydratase family D3H41_RS04145 PF08338 Domain of unknown function (DUF1731) D3H41_RS04150 PF07556 Protein of unknown function (DUF1538) D3H41_RS04155 PF07556 Protein of unknown function (DUF1538) D3H41_RS04175 PF12850 Calcineurin-like phosphoesterase superfamily domain D3H41_RS04190 PF17323 Trans-membrane regulatory protein ToxS D3H41_RS04195 PF00486 Transcriptional regulatory protein, C terminal D3H41_RS04200 PF00183 Hsp90 protein D3H41_RS04200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS04205 PF05191 Adenylate kinase, active site lid D3H41_RS04210 PF00762 Ferrochelatase D3H41_RS04215 PF00854 POT family D3H41_RS04220 PF02357 Transcription termination factor nusG D3H41_RS04225 PF00733 Asparagine synthase D3H41_RS04225 PF13537 Glutamine amidotransferase domain D3H41_RS04230 PF02254 TrkA-N domain D3H41_RS04230 PF00999 Sodium/hydrogen exchanger family D3H41_RS04235 PF01047 MarR family D3H41_RS04235 PF00480 ROK family D3H41_RS04240 PF01979 Amidohydrolase family D3H41_RS04250 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D3H41_RS04250 PF02378 Phosphotransferase system, EIIC D3H41_RS04250 PF00367 phosphotransferase system, EIIB D3H41_RS04255 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain D3H41_RS04255 PF00749 tRNA synthetases class I (E and Q), catalytic domain D3H41_RS04260 PF01475 Ferric uptake regulator family D3H41_RS04270 PF00258 Flavodoxin D3H41_RS04280 PF12697 Alpha/beta hydrolase family D3H41_RS04285 PF03925 SeqA protein C-terminal domain D3H41_RS04285 PF17206 SeqA protein N-terminal domain D3H41_RS04290 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D3H41_RS04290 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D3H41_RS04290 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D3H41_RS04290 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D3H41_RS04300 PF01784 NIF3 (NGG1p interacting factor 3) D3H41_RS04305 PF00285 Citrate synthase, C-terminal domain D3H41_RS04310 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit D3H41_RS04315 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit D3H41_RS04320 PF00890 FAD binding domain D3H41_RS04320 PF02910 Fumarate reductase flavoprotein C-term D3H41_RS04325 PF13085 2Fe-2S iron-sulfur cluster binding domain D3H41_RS04330 PF00676 Dehydrogenase E1 component D3H41_RS04330 PF16078 2-oxoglutarate dehydrogenase N-terminus D3H41_RS04330 PF02779 Transketolase, pyrimidine binding domain D3H41_RS04330 PF16870 2-oxoglutarate dehydrogenase C-terminal D3H41_RS04335 PF02817 e3 binding domain D3H41_RS04335 PF00364 Biotin-requiring enzyme D3H41_RS04335 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D3H41_RS04340 PF00549 CoA-ligase D3H41_RS04340 PF08442 ATP-grasp domain D3H41_RS04345 PF00549 CoA-ligase D3H41_RS04345 PF02629 CoA binding domain D3H41_RS04350 PF00950 ABC 3 transport family D3H41_RS04355 PF00005 ABC transporter D3H41_RS04360 PF01297 Zinc-uptake complex component A periplasmic D3H41_RS04365 PF12833 Helix-turn-helix domain D3H41_RS04365 PF02311 AraC-like ligand binding domain D3H41_RS04370 PF04023 FeoA domain D3H41_RS04375 PF07670 Nucleoside recognition D3H41_RS04375 PF02421 Ferrous iron transport protein B D3H41_RS04375 PF17910 FeoB cytosolic helical domain D3H41_RS04375 PF07664 Ferrous iron transport protein B C terminus D3H41_RS04395 PF03485 Arginyl tRNA synthetase N terminal domain D3H41_RS04395 PF05746 DALR anticodon binding domain D3H41_RS04395 PF00750 tRNA synthetases class I (R) D3H41_RS04405 PF06185 YecM protein D3H41_RS04415 PF00089 Trypsin D3H41_RS04420 PF01842 ACT domain D3H41_RS04420 PF00551 Formyl transferase D3H41_RS04425 PF04851 Type III restriction enzyme, res subunit D3H41_RS04425 PF13307 Helicase C-terminal domain D3H41_RS04430 PF00814 Glycoprotease family D3H41_RS04440 PF03843 Outer membrane lipoprotein Slp family D3H41_RS04445 PF00561 alpha/beta hydrolase fold D3H41_RS04450 PF13193 AMP-binding enzyme C-terminal domain D3H41_RS04450 PF00501 AMP-binding enzyme D3H41_RS04455 PF01612 3'-5' exonuclease D3H41_RS04455 PF00570 HRDC domain D3H41_RS04460 PF03776 Septum formation topological specificity factor MinE D3H41_RS04465 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D3H41_RS04470 PF03775 Septum formation inhibitor MinC, C-terminal domain D3H41_RS04470 PF05209 Septum formation inhibitor MinC, N-terminal domain D3H41_RS04475 PF05166 YcgL domain D3H41_RS04480 PF13406 Transglycosylase SLT domain D3H41_RS04485 PF03466 LysR substrate binding domain D3H41_RS04485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS04490 PF07670 Nucleoside recognition D3H41_RS04490 PF01773 Na+ dependent nucleoside transporter N-terminus D3H41_RS04490 PF07662 Na+ dependent nucleoside transporter C-terminus D3H41_RS04495 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain D3H41_RS04495 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain D3H41_RS04505 PF02801 Beta-ketoacyl synthase, C-terminal domain D3H41_RS04505 PF00109 Beta-ketoacyl synthase, N-terminal domain D3H41_RS04515 PF07977 FabA-like domain D3H41_RS04520 PF00109 Beta-ketoacyl synthase, N-terminal domain D3H41_RS04520 PF02801 Beta-ketoacyl synthase, C-terminal domain D3H41_RS04545 PF00221 Aromatic amino acid lyase D3H41_RS04550 PF00535 Glycosyl transferase family 2 D3H41_RS04555 PF07977 FabA-like domain D3H41_RS04570 PF00550 Phosphopantetheine attachment site D3H41_RS04575 PF00550 Phosphopantetheine attachment site D3H41_RS04600 PF04820 Tryptophan halogenase D3H41_RS04610 PF00271 Helicase conserved C-terminal domain D3H41_RS04610 PF00270 DEAD/DEAH box helicase D3H41_RS04615 PF02080 TrkA-C domain D3H41_RS04615 PF02254 TrkA-N domain D3H41_RS04620 PF02386 Cation transport protein D3H41_RS04635 PF02696 Uncharacterized ACR, YdiU/UPF0061 family D3H41_RS04640 PF03480 Bacterial extracellular solute-binding protein, family 7 D3H41_RS04645 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component D3H41_RS04650 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D3H41_RS04660 PF00072 Response regulator receiver domain D3H41_RS04660 PF02954 Bacterial regulatory protein, Fis family D3H41_RS04660 PF00158 Sigma-54 interaction domain D3H41_RS04665 PF00512 His Kinase A (phospho-acceptor) domain D3H41_RS04665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS04665 PF02743 Cache domain D3H41_RS04675 PF05698 Bacterial trigger factor protein (TF) C-terminus D3H41_RS04675 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D3H41_RS04675 PF05697 Bacterial trigger factor protein (TF) D3H41_RS04680 PF00574 Clp protease D3H41_RS04685 PF07724 AAA domain (Cdc48 subfamily) D3H41_RS04685 PF10431 C-terminal, D2-small domain, of ClpB protein D3H41_RS04685 PF06689 ClpX C4-type zinc finger D3H41_RS04690 PF05362 Lon protease (S16) C-terminal proteolytic domain D3H41_RS04690 PF02190 ATP-dependent protease La (LON) substrate-binding domain D3H41_RS04690 PF00004 ATPase family associated with various cellular activities (AAA) D3H41_RS04695 PF00216 Bacterial DNA-binding protein D3H41_RS04700 PF13145 PPIC-type PPIASE domain D3H41_RS04720 PF13286 Phosphohydrolase-associated domain D3H41_RS04720 PF01966 HD domain D3H41_RS04730 PF00155 Aminotransferase class I and II D3H41_RS04735 PF00425 chorismate binding enzyme D3H41_RS04740 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D3H41_RS04740 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D3H41_RS04740 PF16582 Middle domain of thiamine pyrophosphate D3H41_RS04745 PF12697 Alpha/beta hydrolase family D3H41_RS04750 PF00378 Enoyl-CoA hydratase/isomerase D3H41_RS04755 PF13378 Enolase C-terminal domain-like D3H41_RS04760 PF13193 AMP-binding enzyme C-terminal domain D3H41_RS04760 PF00501 AMP-binding enzyme D3H41_RS04770 PF03601 Conserved hypothetical protein 698 D3H41_RS04775 PF07690 Major Facilitator Superfamily D3H41_RS04820 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D3H41_RS04820 PF00529 HlyD membrane-fusion protein of T1SS D3H41_RS04825 PF00873 AcrB/AcrD/AcrF family D3H41_RS04845 PF00291 Pyridoxal-phosphate dependent enzyme D3H41_RS04850 PF01037 Lrp/AsnC ligand binding domain D3H41_RS04850 PF13404 AsnC-type helix-turn-helix domain D3H41_RS04865 PF09619 Type III secretion system lipoprotein chaperone (YscW) D3H41_RS04870 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D3H41_RS04880 PF00990 Diguanylate cyclase, GGDEF domain D3H41_RS04890 PF00588 SpoU rRNA Methylase family D3H41_RS04890 PF08032 RNA 2'-O ribose methyltransferase substrate binding D3H41_RS04895 PF00571 CBS domain D3H41_RS04895 PF00478 IMP dehydrogenase / GMP reductase domain D3H41_RS04900 PF00403 Heavy-metal-associated domain D3H41_RS04905 PF01048 Phosphorylase superfamily D3H41_RS04915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_RS04915 PF00672 HAMP domain D3H41_RS04920 PF01230 HIT domain D3H41_RS04935 PF08139 Prokaryotic membrane lipoprotein lipid attachment site D3H41_RS04935 PF13036 Peptidoglycan-synthase activator LpoB D3H41_RS04940 PF01636 Phosphotransferase enzyme family D3H41_RS04945 PF05728 Uncharacterised protein family (UPF0227) D3H41_RS04950 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3H41_RS04965 PF02559 CarD-like/TRCF domain D3H41_RS04965 PF00270 DEAD/DEAH box helicase D3H41_RS04965 PF00271 Helicase conserved C-terminal domain D3H41_RS04965 PF03461 TRCF domain D3H41_RS04965 PF17757 UvrB interaction domain D3H41_RS04975 PF02687 FtsX-like permease family D3H41_RS04975 PF12704 MacB-like periplasmic core domain D3H41_RS04980 PF00005 ABC transporter D3H41_RS04985 PF02687 FtsX-like permease family D3H41_RS04985 PF12704 MacB-like periplasmic core domain D3H41_RS04995 PF03772 Competence protein D3H41_RS04995 PF13567 Domain of unknown function (DUF4131) D3H41_RS04995 PF00753 Metallo-beta-lactamase superfamily D3H41_RS05005 PF00005 ABC transporter D3H41_RS05005 PF00664 ABC transporter transmembrane region D3H41_RS05010 PF02606 Tetraacyldisaccharide-1-P 4'-kinase D3H41_RS05015 PF03966 Trm112p-like protein D3H41_RS05020 PF02348 Cytidylyltransferase D3H41_RS05025 PF04293 SpoVR like protein D3H41_RS05030 PF04285 Protein of unknown function (DUF444) D3H41_RS05035 PF08298 PrkA AAA domain D3H41_RS05035 PF06798 PrkA serine protein kinase C-terminal domain D3H41_RS05045 PF03887 YfbU domain D3H41_RS05055 PF04055 Radical SAM superfamily D3H41_RS05065 PF02901 Pyruvate formate lyase-like D3H41_RS05065 PF01228 Glycine radical D3H41_RS05085 PF00005 ABC transporter D3H41_RS05090 PF00497 Bacterial extracellular solute-binding proteins, family 3 D3H41_RS05095 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS05100 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS05110 PF03372 Endonuclease/Exonuclease/phosphatase family D3H41_RS05115 PF10689 Protein of unknown function (DUF2496) D3H41_RS05120 PF07445 Primosomal replication protein priC D3H41_RS05125 PF01925 Sulfite exporter TauE/SafE D3H41_RS05130 PF13307 Helicase C-terminal domain D3H41_RS05130 PF06733 DEAD_2 D3H41_RS05140 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) D3H41_RS05145 PF00849 RNA pseudouridylate synthase D3H41_RS05150 PF03971 Monomeric isocitrate dehydrogenase D3H41_RS05155 PF00313 'Cold-shock' DNA-binding domain D3H41_RS05160 PF02617 ATP-dependent Clp protease adaptor protein ClpS D3H41_RS05165 PF10431 C-terminal, D2-small domain, of ClpB protein D3H41_RS05165 PF02861 Clp amino terminal domain, pathogenicity island component D3H41_RS05165 PF17871 AAA lid domain D3H41_RS05165 PF00004 ATPase family associated with various cellular activities (AAA) D3H41_RS05165 PF07724 AAA domain (Cdc48 subfamily) D3H41_RS05170 PF01176 Translation initiation factor 1A / IF-1 D3H41_RS05175 PF04376 Arginine-tRNA-protein transferase, N terminus D3H41_RS05175 PF04377 Arginine-tRNA-protein transferase, C terminus D3H41_RS05180 PF03588 Leucyl/phenylalanyl-tRNA protein transferase D3H41_RS05190 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D3H41_RS05195 PF10692 Protein of unknown function (DUF2498) D3H41_RS05200 PF08272 Topoisomerase I zinc-ribbon-like D3H41_RS05200 PF01396 Topoisomerase DNA binding C4 zinc finger D3H41_RS05200 PF01751 Toprim domain D3H41_RS05200 PF01131 DNA topoisomerase D3H41_RS05205 PF00483 Nucleotidyl transferase D3H41_RS05210 PF08323 Starch synthase catalytic domain D3H41_RS05210 PF00534 Glycosyl transferases group 1 D3H41_RS05230 PF04993 TfoX N-terminal domain D3H41_RS05230 PF04994 TfoX C-terminal domain D3H41_RS05235 PF00356 Bacterial regulatory proteins, lacI family D3H41_RS05240 PF02613 Nitrate reductase delta subunit D3H41_RS05245 PF00486 Transcriptional regulatory protein, C terminal D3H41_RS05245 PF00072 Response regulator receiver domain D3H41_RS05250 PF02698 DUF218 domain D3H41_RS05255 PF13847 Methyltransferase domain D3H41_RS05260 PF17193 MukF C-terminal domain D3H41_RS05260 PF17192 MukF middle domain D3H41_RS05260 PF03882 MukF winged-helix domain D3H41_RS05265 PF04288 MukE-like family D3H41_RS05270 PF16330 MukB hinge domain D3H41_RS05270 PF04310 MukB N-terminal D3H41_RS05290 PF18030 RimK PreATP-grasp domain D3H41_RS05290 PF08443 RimK-like ATP-grasp domain D3H41_RS05300 PF08003 Protein of unknown function (DUF1698) D3H41_RS05305 PF13649 Methyltransferase domain D3H41_RS05310 PF01904 Protein of unknown function DUF72 D3H41_RS05315 PF00152 tRNA synthetases class II (D, K and N) D3H41_RS05315 PF01336 OB-fold nucleic acid binding domain D3H41_RS05315 PF02938 GAD domain D3H41_RS05320 PF01709 Transcriptional regulator D3H41_RS05325 PF02075 Crossover junction endodeoxyribonuclease RuvC D3H41_RS05330 PF07499 RuvA, C-terminal domain D3H41_RS05330 PF01330 RuvA N terminal domain D3H41_RS05335 PF05491 RuvB C-terminal winged helix domain D3H41_RS05335 PF05496 Holliday junction DNA helicase RuvB P-loop domain D3H41_RS05335 PF17864 RuvB AAA lid domain D3H41_RS05340 PF01654 Cytochrome bd terminal oxidase subunit I D3H41_RS05345 PF02322 Cytochrome bd terminal oxidase subunit II D3H41_RS05350 PF08173 Membrane bound YbgT-like protein D3H41_RS05360 PF03061 Thioesterase superfamily D3H41_RS05365 PF01618 MotA/TolQ/ExbB proton channel family D3H41_RS05370 PF02472 Biopolymer transport protein ExbD/TolR D3H41_RS05380 PF04052 TolB amino-terminal domain D3H41_RS05380 PF07676 WD40-like Beta Propeller Repeat D3H41_RS05385 PF00691 OmpA family D3H41_RS05390 PF16331 TolA binding protein trimerisation D3H41_RS05390 PF13174 Tetratricopeptide repeat D3H41_RS05395 PF02445 Quinolinate synthetase A protein D3H41_RS05405 PF03994 Domain of Unknown Function (DUF350) D3H41_RS05415 PF03738 Glutathionylspermidine synthase preATP-grasp D3H41_RS05425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS05425 PF00072 Response regulator receiver domain D3H41_RS05425 PF09308 LuxQ, periplasmic D3H41_RS05425 PF00512 His Kinase A (phospho-acceptor) domain D3H41_RS05430 PF06610 L-alanine exporter D3H41_RS05455 PF00075 RNase H D3H41_RS05460 PF00239 Resolvase, N terminal domain D3H41_RS05460 PF02796 Helix-turn-helix domain of resolvase D3H41_RS05470 PF02322 Cytochrome bd terminal oxidase subunit II D3H41_RS05475 PF01654 Cytochrome bd terminal oxidase subunit I D3H41_RS05490 PF17200 Single Cache domain 2 D3H41_RS05490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_RS05490 PF00672 HAMP domain D3H41_RS05495 PF00529 HlyD membrane-fusion protein of T1SS D3H41_RS05495 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D3H41_RS05500 PF00873 AcrB/AcrD/AcrF family D3H41_RS05515 PF00579 tRNA synthetases class I (W and Y) D3H41_RS05525 PF03372 Endonuclease/Exonuclease/phosphatase family D3H41_RS05535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_RS05535 PF00672 HAMP domain D3H41_RS05540 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) D3H41_RS05550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS05550 PF03466 LysR substrate binding domain D3H41_RS05560 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D3H41_RS05560 PF05222 Alanine dehydrogenase/PNT, N-terminal domain D3H41_RS05565 PF01037 Lrp/AsnC ligand binding domain D3H41_RS05570 PF13491 4TM region of DNA translocase FtsK/SpoIIIE D3H41_RS05570 PF17854 FtsK alpha domain D3H41_RS05570 PF09397 Ftsk gamma domain D3H41_RS05570 PF01580 FtsK/SpoIIIE family D3H41_RS05575 PF03548 Outer membrane lipoprotein carrier protein LolA D3H41_RS05580 PF16193 AAA C-terminal domain D3H41_RS05580 PF00004 ATPase family associated with various cellular activities (AAA) D3H41_RS05580 PF12002 MgsA AAA+ ATPase C terminal D3H41_RS05585 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D3H41_RS05585 PF02403 Seryl-tRNA synthetase N-terminal domain D3H41_RS05600 PF01258 Prokaryotic dksA/traR C4-type zinc finger D3H41_RS05605 PF00202 Aminotransferase class-III D3H41_RS05610 PF06968 Biotin and Thiamin Synthesis associated domain D3H41_RS05610 PF04055 Radical SAM superfamily D3H41_RS05615 PF00155 Aminotransferase class I and II D3H41_RS05620 PF08241 Methyltransferase domain D3H41_RS05635 PF01435 Peptidase family M48 D3H41_RS05645 PF00106 short chain dehydrogenase D3H41_RS05670 PF16036 Chalcone isomerase-like D3H41_RS05680 PF08328 Adenylosuccinate lyase C-terminal D3H41_RS05680 PF00206 Lyase D3H41_RS05685 PF04356 Protein of unknown function (DUF489) D3H41_RS05700 PF00294 pfkB family carbohydrate kinase D3H41_RS05705 PF00816 H-NS histone family D3H41_RS05710 PF03553 Na+/H+ antiporter family D3H41_RS05715 PF00158 Sigma-54 interaction domain D3H41_RS05715 PF02954 Bacterial regulatory protein, Fis family D3H41_RS05715 PF00072 Response regulator receiver domain D3H41_RS05720 PF08029 HisG, C-terminal domain D3H41_RS05720 PF01634 ATP phosphoribosyltransferase D3H41_RS05725 PF00815 Histidinol dehydrogenase D3H41_RS05730 PF00155 Aminotransferase class I and II D3H41_RS05735 PF00475 Imidazoleglycerol-phosphate dehydratase D3H41_RS05735 PF08645 Polynucleotide kinase 3 phosphatase D3H41_RS05740 PF00117 Glutamine amidotransferase class-I D3H41_RS05745 PF00977 Histidine biosynthesis protein D3H41_RS05750 PF00977 Histidine biosynthesis protein D3H41_RS05755 PF01502 Phosphoribosyl-AMP cyclohydrolase D3H41_RS05755 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase D3H41_RS05760 PF02810 SEC-C motif D3H41_RS05765 PF00563 EAL domain D3H41_RS05765 PF08668 HDOD domain D3H41_RS05770 PF00149 Calcineurin-like phosphoesterase D3H41_RS05775 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D3H41_RS05780 PF09190 DALR domain D3H41_RS05780 PF01406 tRNA synthetases class I (C) catalytic domain D3H41_RS05785 PF00265 Thymidine kinase D3H41_RS05790 PF02698 DUF218 domain D3H41_RS05815 PF01226 Formate/nitrite transporter D3H41_RS05825 PF03649 Uncharacterised protein family (UPF0014) D3H41_RS05830 PF06796 Periplasmic nitrate reductase protein NapE D3H41_RS05835 PF03264 NapC/NirT cytochrome c family, N-terminal region D3H41_RS05840 PF18364 Molybdopterin oxidoreductase N-terminal domain D3H41_RS05840 PF01568 Molydopterin dinucleotide binding domain D3H41_RS05840 PF00384 Molybdopterin oxidoreductase D3H41_RS05855 PF01368 DHH family D3H41_RS05855 PF02833 DHHA2 domain D3H41_RS05865 PF00005 ABC transporter D3H41_RS05870 PF00005 ABC transporter D3H41_RS05870 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3H41_RS05875 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS05875 PF12911 N-terminal TM domain of oligopeptide transport permease C D3H41_RS05880 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS05885 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3H41_RS05890 PF00158 Sigma-54 interaction domain D3H41_RS05890 PF02954 Bacterial regulatory protein, Fis family D3H41_RS05895 PF04012 PspA/IM30 family D3H41_RS05900 PF06667 Phage shock protein B D3H41_RS05905 PF04024 PspC domain D3H41_RS05915 PF13533 Biotin-lipoyl like D3H41_RS05920 PF00873 AcrB/AcrD/AcrF family D3H41_RS05925 PF03352 Methyladenine glycosylase D3H41_RS05930 PF03280 Proteobacterial lipase chaperone protein D3H41_RS05935 PF00561 alpha/beta hydrolase fold D3H41_RS05940 PF01053 Cys/Met metabolism PLP-dependent enzyme D3H41_RS05945 PF13396 Phospholipase_D-nuclease N-terminal D3H41_RS05945 PF13091 PLD-like domain D3H41_RS05950 PF00209 Sodium:neurotransmitter symporter family D3H41_RS05955 PF00849 RNA pseudouridylate synthase D3H41_RS05965 PF00970 Oxidoreductase FAD-binding domain D3H41_RS05965 PF00111 2Fe-2S iron-sulfur cluster binding domain D3H41_RS05965 PF00175 Oxidoreductase NAD-binding domain D3H41_RS05970 PF03063 Prismane/CO dehydrogenase family D3H41_RS05975 PF00158 Sigma-54 interaction domain D3H41_RS05975 PF01590 GAF domain D3H41_RS05990 PF01066 CDP-alcohol phosphatidyltransferase D3H41_RS05995 PF00005 ABC transporter D3H41_RS06000 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS06005 PF13416 Bacterial extracellular solute-binding protein D3H41_RS06015 PF06945 Protein of unknown function (DUF1289) D3H41_RS06030 PF02872 5'-nucleotidase, C-terminal domain D3H41_RS06030 PF00149 Calcineurin-like phosphoesterase D3H41_RS06040 PF01386 Ribosomal L25p family D3H41_RS06045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS06050 PF00486 Transcriptional regulatory protein, C terminal D3H41_RS06050 PF00072 Response regulator receiver domain D3H41_RS06060 PF04851 Type III restriction enzyme, res subunit D3H41_RS06060 PF00271 Helicase conserved C-terminal domain D3H41_RS06065 PF00849 RNA pseudouridylate synthase D3H41_RS06065 PF01479 S4 domain D3H41_RS06075 PF07690 Major Facilitator Superfamily D3H41_RS06085 PF11066 Protein of unknown function (DUF2867) D3H41_RS06085 PF13460 NAD(P)H-binding D3H41_RS06090 PF01554 MatE D3H41_RS06095 PF00005 ABC transporter D3H41_RS06110 PF06965 Na+/H+ antiporter 1 D3H41_RS06115 PF16295 Tetracyclin repressor-like, C-terminal domain D3H41_RS06115 PF00440 Bacterial regulatory proteins, tetR family D3H41_RS06120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D3H41_RS06120 PF02770 Acyl-CoA dehydrogenase, middle domain D3H41_RS06120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D3H41_RS06120 PF09317 Domain of unknown function (DUF1974) D3H41_RS06125 PF12241 Trans-2-enoyl-CoA reductase catalytic region D3H41_RS06125 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase D3H41_RS06125 PF07055 Enoyl reductase FAD binding domain D3H41_RS06130 PF02080 TrkA-C domain D3H41_RS06130 PF06826 Predicted Permease Membrane Region D3H41_RS06135 PF00462 Glutaredoxin D3H41_RS06145 PF00465 Iron-containing alcohol dehydrogenase D3H41_RS06150 PF01380 SIS domain D3H41_RS06150 PF01418 Helix-turn-helix domain, rpiR family D3H41_RS06155 PF00282 Pyridoxal-dependent decarboxylase conserved domain D3H41_RS06165 PF03956 Lysine exporter LysO D3H41_RS06185 PF04993 TfoX N-terminal domain D3H41_RS06185 PF04994 TfoX C-terminal domain D3H41_RS06200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS06200 PF00512 His Kinase A (phospho-acceptor) domain D3H41_RS06200 PF00497 Bacterial extracellular solute-binding proteins, family 3 D3H41_RS06210 PF00266 Aminotransferase class-V D3H41_RS06215 PF00291 Pyridoxal-phosphate dependent enzyme D3H41_RS06220 PF00664 ABC transporter transmembrane region D3H41_RS06220 PF00005 ABC transporter D3H41_RS06225 PF00664 ABC transporter transmembrane region D3H41_RS06225 PF00005 ABC transporter D3H41_RS06230 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3H41_RS06240 PF00266 Aminotransferase class-V D3H41_RS06250 PF00072 Response regulator receiver domain D3H41_RS06250 PF00990 Diguanylate cyclase, GGDEF domain D3H41_RS06255 PF00939 Sodium:sulfate symporter transmembrane region D3H41_RS06260 PF02698 DUF218 domain D3H41_RS06265 PF03949 Malic enzyme, NAD binding domain D3H41_RS06265 PF00390 Malic enzyme, N-terminal domain D3H41_RS06270 PF00271 Helicase conserved C-terminal domain D3H41_RS06270 PF00270 DEAD/DEAH box helicase D3H41_RS06270 PF04408 Helicase associated domain (HA2) D3H41_RS06270 PF08482 ATP-dependent helicase C-terminal D3H41_RS06280 PF16655 PhoD-like phosphatase, N-terminal domain D3H41_RS06280 PF09423 PhoD-like phosphatase D3H41_RS06285 PF01259 SAICAR synthetase D3H41_RS06305 PF05736 OprF membrane domain D3H41_RS06305 PF00691 OmpA family D3H41_RS06320 PF01565 FAD binding domain D3H41_RS06320 PF13183 4Fe-4S dicluster domain D3H41_RS06320 PF02913 FAD linked oxidases, C-terminal domain D3H41_RS06325 PF04191 Phospholipid methyltransferase D3H41_RS06335 PF00221 Aromatic amino acid lyase D3H41_RS06340 PF17392 Urocanase C-terminal domain D3H41_RS06340 PF01175 Urocanase Rossmann-like domain D3H41_RS06340 PF17391 Urocanase N-terminal domain D3H41_RS06345 PF00491 Arginase family D3H41_RS06350 PF01979 Amidohydrolase family D3H41_RS06355 PF00392 Bacterial regulatory proteins, gntR family D3H41_RS06355 PF07702 UTRA domain D3H41_RS06370 PF02824 TGS domain D3H41_RS06370 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D3H41_RS06370 PF03129 Anticodon binding domain D3H41_RS06370 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D3H41_RS06375 PF00707 Translation initiation factor IF-3, C-terminal domain D3H41_RS06375 PF05198 Translation initiation factor IF-3, N-terminal domain D3H41_RS06380 PF01632 Ribosomal protein L35 D3H41_RS06385 PF00453 Ribosomal protein L20 D3H41_RS06390 PF01906 Putative heavy-metal-binding D3H41_RS06425 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain D3H41_RS06425 PF01409 tRNA synthetases class II core domain (F) D3H41_RS06430 PF03483 B3/4 domain D3H41_RS06430 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain D3H41_RS06430 PF01588 Putative tRNA binding domain D3H41_RS06430 PF03147 Ferredoxin-fold anticodon binding domain D3H41_RS06430 PF03484 tRNA synthetase B5 domain D3H41_RS06440 PF00216 Bacterial DNA-binding protein D3H41_RS06450 PF05724 Thiopurine S-methyltransferase (TPMT) D3H41_RS06455 PF02222 ATP-grasp domain D3H41_RS06465 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D3H41_RS06465 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region D3H41_RS06470 PF04172 LrgB-like family D3H41_RS06475 PF03788 LrgA family D3H41_RS06480 PF00929 Exonuclease D3H41_RS06480 PF08411 Exonuclease C-terminal D3H41_RS06485 PF00375 Sodium:dicarboxylate symporter family D3H41_RS06490 PF13460 NAD(P)H-binding D3H41_RS06495 PF02277 Phosphoribosyltransferase D3H41_RS06500 PF02654 Cobalamin-5-phosphate synthase D3H41_RS06505 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase D3H41_RS06520 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family D3H41_RS06525 PF01032 FecCD transport family D3H41_RS06530 PF00005 ABC transporter D3H41_RS06550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS06550 PF03466 LysR substrate binding domain D3H41_RS06560 PF01863 Protein of unknown function DUF45 D3H41_RS06565 PF05971 RNA methyltransferase D3H41_RS06585 PF00392 Bacterial regulatory proteins, gntR family D3H41_RS06590 PF00171 Aldehyde dehydrogenase family D3H41_RS06595 PF05544 Proline racemase D3H41_RS06610 PF02423 Ornithine cyclodeaminase/mu-crystallin family D3H41_RS06615 PF00701 Dihydrodipicolinate synthetase family D3H41_RS06620 PF00005 ABC transporter D3H41_RS06620 PF08402 TOBE domain D3H41_RS06625 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS06630 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS06640 PF08453 Peptidase family M9 N-terminal D3H41_RS06640 PF01752 Collagenase D3H41_RS06650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3H41_RS06650 PF00005 ABC transporter D3H41_RS06655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3H41_RS06655 PF00005 ABC transporter D3H41_RS06660 PF12911 N-terminal TM domain of oligopeptide transport permease C D3H41_RS06660 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS06665 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS06670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3H41_RS06675 PF01546 Peptidase family M20/M25/M40 D3H41_RS06675 PF07687 Peptidase dimerisation domain D3H41_RS06680 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D3H41_RS06685 PF04209 homogentisate 1,2-dioxygenase D3H41_RS06695 PF14497 Glutathione S-transferase, C-terminal domain D3H41_RS06695 PF02798 Glutathione S-transferase, N-terminal domain D3H41_RS06745 PF07007 Lysozyme inhibitor LprI D3H41_RS06770 PF02694 Uncharacterised BCR, YnfA/UPF0060 family D3H41_RS06785 PF03553 Na+/H+ antiporter family D3H41_RS06790 PF00120 Glutamine synthetase, catalytic domain D3H41_RS06800 PF07722 Peptidase C26 D3H41_RS06805 PF01381 Helix-turn-helix D3H41_RS06805 PF07883 Cupin domain D3H41_RS06810 PF00171 Aldehyde dehydrogenase family D3H41_RS06815 PF01266 FAD dependent oxidoreductase D3H41_RS06820 PF00795 Carbon-nitrogen hydrolase D3H41_RS06825 PF04371 Porphyromonas-type peptidyl-arginine deiminase D3H41_RS06830 PF00171 Aldehyde dehydrogenase family D3H41_RS06835 PF00202 Aminotransferase class-III D3H41_RS06840 PF12792 CSS motif domain associated with EAL D3H41_RS06840 PF00563 EAL domain D3H41_RS06850 PF01047 MarR family D3H41_RS06855 PF04237 YjbR D3H41_RS06880 PF00512 His Kinase A (phospho-acceptor) domain D3H41_RS06880 PF01627 Hpt domain D3H41_RS06880 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D3H41_RS06880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS06880 PF00672 HAMP domain D3H41_RS06880 PF00072 Response regulator receiver domain D3H41_RS06885 PF00563 EAL domain D3H41_RS06885 PF03707 Bacterial signalling protein N terminal repeat D3H41_RS06885 PF00990 Diguanylate cyclase, GGDEF domain D3H41_RS06900 PF04204 Homoserine O-succinyltransferase D3H41_RS06910 PF00893 Small Multidrug Resistance protein D3H41_RS06915 PF03279 Bacterial lipid A biosynthesis acyltransferase D3H41_RS06920 PF02074 Carboxypeptidase Taq (M32) metallopeptidase D3H41_RS06925 PF01810 LysE type translocator D3H41_RS06935 PF01235 Sodium:alanine symporter family D3H41_RS06960 PF00884 Sulfatase D3H41_RS06965 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D3H41_RS06970 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS06975 PF00571 CBS domain D3H41_RS06975 PF00005 ABC transporter D3H41_RS06990 PF02028 BCCT, betaine/carnitine/choline family transporter D3H41_RS07000 PF00583 Acetyltransferase (GNAT) family D3H41_RS07005 PF00202 Aminotransferase class-III D3H41_RS07010 PF06339 Ectoine synthase D3H41_RS07015 PF00696 Amino acid kinase family D3H41_RS07015 PF13840 ACT domain D3H41_RS07020 PF00884 Sulfatase D3H41_RS07030 PF03781 Sulfatase-modifying factor enzyme 1 D3H41_RS07035 PF04055 Radical SAM superfamily D3H41_RS07035 PF13186 Iron-sulfur cluster-binding domain D3H41_RS07050 PF00884 Sulfatase D3H41_RS07055 PF00884 Sulfatase D3H41_RS07065 PF00664 ABC transporter transmembrane region D3H41_RS07065 PF00005 ABC transporter D3H41_RS07065 PF03412 Peptidase C39 family D3H41_RS07075 PF02321 Outer membrane efflux protein D3H41_RS07090 PF08220 DeoR-like helix-turn-helix domain D3H41_RS07090 PF00455 DeoR C terminal sensor domain D3H41_RS07095 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D3H41_RS07095 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D3H41_RS07100 PF03928 Haem-degrading D3H41_RS07105 PF00072 Response regulator receiver domain D3H41_RS07105 PF00990 Diguanylate cyclase, GGDEF domain D3H41_RS07125 PF00939 Sodium:sulfate symporter transmembrane region D3H41_RS07130 PF00512 His Kinase A (phospho-acceptor) domain D3H41_RS07130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS07135 PF02954 Bacterial regulatory protein, Fis family D3H41_RS07135 PF00072 Response regulator receiver domain D3H41_RS07135 PF00158 Sigma-54 interaction domain D3H41_RS07140 PF03707 Bacterial signalling protein N terminal repeat D3H41_RS07140 PF00990 Diguanylate cyclase, GGDEF domain D3H41_RS07140 PF00563 EAL domain D3H41_RS07145 PF11871 Domain of unknown function (DUF3391) D3H41_RS07145 PF01966 HD domain D3H41_RS07150 PF01810 LysE type translocator D3H41_RS07155 PF11230 Protein of unknown function (DUF3029) D3H41_RS07160 PF04055 Radical SAM superfamily D3H41_RS07170 PF03741 Integral membrane protein TerC family D3H41_RS07180 PF01966 HD domain D3H41_RS07185 PF00465 Iron-containing alcohol dehydrogenase D3H41_RS07190 PF03222 Tryptophan/tyrosine permease family D3H41_RS07205 PF00005 ABC transporter D3H41_RS07210 PF01497 Periplasmic binding protein D3H41_RS07215 PF01032 FecCD transport family D3H41_RS07220 PF00593 TonB dependent receptor D3H41_RS07220 PF07715 TonB-dependent Receptor Plug Domain D3H41_RS07230 PF00664 ABC transporter transmembrane region D3H41_RS07230 PF00005 ABC transporter D3H41_RS07235 PF00664 ABC transporter transmembrane region D3H41_RS07235 PF00005 ABC transporter D3H41_RS07240 PF08334 Type II secretion system (T2SS), protein G D3H41_RS07240 PF07963 Prokaryotic N-terminal methylation motif D3H41_RS07250 PF03466 LysR substrate binding domain D3H41_RS07250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS07260 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D3H41_RS07260 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D3H41_RS07275 PF00012 Hsp70 protein D3H41_RS07280 PF00012 Hsp70 protein D3H41_RS07290 PF00990 Diguanylate cyclase, GGDEF domain D3H41_RS07325 PF02525 Flavodoxin-like fold D3H41_RS07330 PF04408 Helicase associated domain (HA2) D3H41_RS07330 PF00271 Helicase conserved C-terminal domain D3H41_RS07330 PF00270 DEAD/DEAH box helicase D3H41_RS07330 PF11898 Domain of unknown function (DUF3418) D3H41_RS07330 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold D3H41_RS07345 PF02028 BCCT, betaine/carnitine/choline family transporter D3H41_RS07355 PF02397 Bacterial sugar transferase D3H41_RS07365 PF00534 Glycosyl transferases group 1 D3H41_RS07365 PF13439 Glycosyltransferase Family 4 D3H41_RS07395 PF00534 Glycosyl transferases group 1 D3H41_RS07395 PF13439 Glycosyltransferase Family 4 D3H41_RS07400 PF13439 Glycosyltransferase Family 4 D3H41_RS07400 PF00534 Glycosyl transferases group 1 D3H41_RS07405 PF00158 Sigma-54 interaction domain D3H41_RS07405 PF02954 Bacterial regulatory protein, Fis family D3H41_RS07405 PF00072 Response regulator receiver domain D3H41_RS07420 PF02563 Polysaccharide biosynthesis/export protein D3H41_RS07420 PF10531 SLBB domain D3H41_RS07430 PF01740 STAS domain D3H41_RS07435 PF14743 DNA ligase OB-like domain D3H41_RS07435 PF01068 ATP dependent DNA ligase domain D3H41_RS07445 PF01554 MatE D3H41_RS07450 PF00677 Lumazine binding domain D3H41_RS07460 PF03881 Fructosamine kinase D3H41_RS07465 PF01339 CheB methylesterase D3H41_RS07465 PF00072 Response regulator receiver domain D3H41_RS07470 PF05230 MASE2 domain D3H41_RS07470 PF00990 Diguanylate cyclase, GGDEF domain D3H41_RS07480 PF00877 NlpC/P60 family D3H41_RS07485 PF02743 Cache domain D3H41_RS07485 PF00672 HAMP domain D3H41_RS07485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_RS07510 PF03942 DTW domain D3H41_RS07515 PF00480 ROK family D3H41_RS07525 PF03453 MoeA N-terminal region (domain I and II) D3H41_RS07525 PF03454 MoeA C-terminal region (domain IV) D3H41_RS07525 PF00994 Probable molybdopterin binding domain D3H41_RS07530 PF12804 MobA-like NTP transferase domain D3H41_RS07535 PF00005 ABC transporter D3H41_RS07535 PF08402 TOBE domain D3H41_RS07540 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS07545 PF12849 PBP superfamily domain D3H41_RS07550 PF00072 Response regulator receiver domain D3H41_RS07550 PF00158 Sigma-54 interaction domain D3H41_RS07550 PF02954 Bacterial regulatory protein, Fis family D3H41_RS07555 PF00512 His Kinase A (phospho-acceptor) domain D3H41_RS07555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS07565 PF12848 ABC transporter D3H41_RS07565 PF00005 ABC transporter D3H41_RS07570 PF02634 FdhD/NarQ family D3H41_RS07590 PF02613 Nitrate reductase delta subunit D3H41_RS07600 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D3H41_RS07600 PF00384 Molybdopterin oxidoreductase D3H41_RS07600 PF01568 Molydopterin dinucleotide binding domain D3H41_RS07605 PF13247 4Fe-4S dicluster domain D3H41_RS07620 PF05593 RHS Repeat D3H41_RS07620 PF03527 RHS protein D3H41_RS07720 PF00909 Ammonium Transporter Family D3H41_RS07725 PF02146 Sir2 family D3H41_RS07730 PF13416 Bacterial extracellular solute-binding protein D3H41_RS07735 PF13416 Bacterial extracellular solute-binding protein D3H41_RS07740 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS07745 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS07750 PF08402 TOBE domain D3H41_RS07750 PF00005 ABC transporter D3H41_RS07770 PF01171 PP-loop family D3H41_RS07775 PF00582 Universal stress protein family D3H41_RS07780 PF13545 Crp-like helix-turn-helix domain D3H41_RS07780 PF00027 Cyclic nucleotide-binding domain D3H41_RS07795 PF00403 Heavy-metal-associated domain D3H41_RS07805 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP D3H41_RS07805 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D3H41_RS07820 PF00115 Cytochrome C and Quinol oxidase polypeptide I D3H41_RS07835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS07835 PF00072 Response regulator receiver domain D3H41_RS07835 PF00512 His Kinase A (phospho-acceptor) domain D3H41_RS07835 PF09308 LuxQ, periplasmic D3H41_RS07900 PF13175 AAA ATPase domain D3H41_RS08235 PF17414 MatP C-terminal ribbon-helix-helix domain D3H41_RS08235 PF06303 MatP N-terminal domain D3H41_RS08240 PF13654 AAA domain D3H41_RS08240 PF05362 Lon protease (S16) C-terminal proteolytic domain D3H41_RS08245 PF07977 FabA-like domain D3H41_RS08250 PF04957 Ribosome modulation factor D3H41_RS08260 PF16326 ABC transporter C-terminal domain D3H41_RS08260 PF00005 ABC transporter D3H41_RS08260 PF12848 ABC transporter D3H41_RS08270 PF01170 Putative RNA methylase family UPF0020 D3H41_RS08270 PF10672 S-adenosylmethionine-dependent methyltransferase D3H41_RS08270 PF02926 THUMP domain D3H41_RS08275 PF07126 Cell-division protein ZapC D3H41_RS08280 PF01180 Dihydroorotate dehydrogenase D3H41_RS08290 PF05088 Bacterial NAD-glutamate dehydrogenase D3H41_RS08300 PF17432 Domain of unknown function (DUF3458_C) ARM repeats D3H41_RS08300 PF11940 Domain of unknown function (DUF3458) Ig-like fold D3H41_RS08300 PF01433 Peptidase family M1 domain D3H41_RS08310 PF17804 Tail specific protease N-terminal domain D3H41_RS08310 PF03572 Peptidase family S41 D3H41_RS08310 PF00595 PDZ domain D3H41_RS08310 PF11818 C-terminal domain of tail specific protease (DUF3340) D3H41_RS08315 PF17516 ProQ C-terminal domain D3H41_RS08315 PF04352 ProQ/FINO family D3H41_RS08320 PF13185 GAF domain D3H41_RS08325 PF00664 ABC transporter transmembrane region D3H41_RS08325 PF00005 ABC transporter D3H41_RS08330 PF04403 Paraquat-inducible protein A D3H41_RS08335 PF02470 MlaD protein D3H41_RS08340 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF D3H41_RS08340 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF D3H41_RS08340 PF01189 16S rRNA methyltransferase RsmB/F D3H41_RS08360 PF00793 DAHP synthetase I family D3H41_RS08365 PF04461 Protein of unknown function (DUF520) D3H41_RS08370 PF14824 Sirohaem biosynthesis protein central D3H41_RS08370 PF10414 Sirohaem synthase dimerisation region D3H41_RS08370 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D3H41_RS08380 PF00497 Bacterial extracellular solute-binding proteins, family 3 D3H41_RS08385 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS08390 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS08395 PF00005 ABC transporter D3H41_RS08400 PF01027 Inhibitor of apoptosis-promoting Bax1 D3H41_RS08410 PF04358 DsrC like protein D3H41_RS08415 PF00708 Acylphosphatase D3H41_RS08420 PF00672 HAMP domain D3H41_RS08420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_RS08420 PF02743 Cache domain D3H41_RS08425 PF10672 S-adenosylmethionine-dependent methyltransferase D3H41_RS08425 PF17785 PUA-like domain D3H41_RS08440 PF00691 OmpA family D3H41_RS08440 PF05736 OprF membrane domain D3H41_RS08455 PF00691 OmpA family D3H41_RS08455 PF05736 OprF membrane domain D3H41_RS08465 PF00990 Diguanylate cyclase, GGDEF domain D3H41_RS08470 PF01614 Bacterial transcriptional regulator D3H41_RS08470 PF09339 IclR helix-turn-helix domain D3H41_RS08480 PF00248 Aldo/keto reductase family D3H41_RS08485 PF03466 LysR substrate binding domain D3H41_RS08485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS08495 PF03466 LysR substrate binding domain D3H41_RS08495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS08500 PF07690 Major Facilitator Superfamily D3H41_RS08510 PF00107 Zinc-binding dehydrogenase D3H41_RS08510 PF16197 Ketoacyl-synthetase C-terminal extension D3H41_RS08510 PF08240 Alcohol dehydrogenase GroES-like domain D3H41_RS08510 PF00109 Beta-ketoacyl synthase, N-terminal domain D3H41_RS08510 PF00698 Acyl transferase domain D3H41_RS08510 PF08659 KR domain D3H41_RS08510 PF02801 Beta-ketoacyl synthase, C-terminal domain D3H41_RS08510 PF00550 Phosphopantetheine attachment site D3H41_RS08510 PF14765 Polyketide synthase dehydratase D3H41_RS08515 PF02311 AraC-like ligand binding domain D3H41_RS08515 PF12833 Helix-turn-helix domain D3H41_RS08520 PF00857 Isochorismatase family D3H41_RS08525 PF00497 Bacterial extracellular solute-binding proteins, family 3 D3H41_RS08535 PF00107 Zinc-binding dehydrogenase D3H41_RS08535 PF08240 Alcohol dehydrogenase GroES-like domain D3H41_RS08540 PF02965 Vitamin B12 dependent methionine synthase, activation domain D3H41_RS08540 PF02607 B12 binding domain D3H41_RS08540 PF02310 B12 binding domain D3H41_RS08540 PF00809 Pterin binding enzyme D3H41_RS08540 PF02574 Homocysteine S-methyltransferase D3H41_RS08545 PF00005 ABC transporter D3H41_RS08550 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS08555 PF00497 Bacterial extracellular solute-binding proteins, family 3 D3H41_RS08565 PF00267 Gram-negative porin D3H41_RS08570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS08570 PF03466 LysR substrate binding domain D3H41_RS08580 PF00873 AcrB/AcrD/AcrF family D3H41_RS08585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS08585 PF03466 LysR substrate binding domain D3H41_RS08595 PF03466 LysR substrate binding domain D3H41_RS08595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS08600 PF01810 LysE type translocator D3H41_RS08610 PF06508 Queuosine biosynthesis protein QueC D3H41_RS08615 PF04055 Radical SAM superfamily D3H41_RS08630 PF00089 Trypsin D3H41_RS08640 PF13193 AMP-binding enzyme C-terminal domain D3H41_RS08640 PF00501 AMP-binding enzyme D3H41_RS08640 PF16177 Acetyl-coenzyme A synthetase N-terminus D3H41_RS08645 PF04303 PrpF protein D3H41_RS08650 PF00694 Aconitase C-terminal domain D3H41_RS08650 PF00330 Aconitase family (aconitate hydratase) D3H41_RS08655 PF00285 Citrate synthase, C-terminal domain D3H41_RS08685 PF01970 Tripartite tricarboxylate transporter TctA family D3H41_RS08695 PF01925 Sulfite exporter TauE/SafE D3H41_RS08700 PF16868 NMT1-like family D3H41_RS08705 PF05844 YopD protein D3H41_RS08715 PF07720 Tetratricopeptide repeat D3H41_RS08720 PF04792 V antigen (LcrV) protein D3H41_RS08730 PF09621 Type III secretion system regulator (LcrR) D3H41_RS08735 PF00771 FHIPEP family D3H41_RS08755 PF09059 TyeA D3H41_RS08765 PF02874 ATP synthase alpha/beta family, beta-barrel domain D3H41_RS08765 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D3H41_RS08765 PF18269 T3SS EscN ATPase C-terminal domain D3H41_RS08780 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D3H41_RS08785 PF00813 FliP family D3H41_RS08790 PF01313 Bacterial export proteins, family 3 D3H41_RS08795 PF01311 Bacterial export proteins, family 1 D3H41_RS08800 PF01312 FlhB HrpN YscU SpaS Family D3H41_RS08805 PF12833 Helix-turn-helix domain D3H41_RS08805 PF12852 Cupin D3H41_RS08835 PF02661 Fic/DOC family D3H41_RS08845 PF02108 Flagellar assembly protein FliH D3H41_RS08855 PF01514 Secretory protein of YscJ/FliF family D3H41_RS08860 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI D3H41_RS08870 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) D3H41_RS08875 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF D3H41_RS08885 PF16693 Inner membrane component of T3SS, periplasmic domain D3H41_RS08885 PF16697 Inner membrane component of T3SS, cytoplasmic domain D3H41_RS08890 PF00263 Bacterial type II and III secretion system protein D3H41_RS08890 PF03958 Bacterial type II/III secretion system short domain D3H41_RS08905 PF12833 Helix-turn-helix domain D3H41_RS08925 PF00171 Aldehyde dehydrogenase family D3H41_RS08930 PF01590 GAF domain D3H41_RS08930 PF02954 Bacterial regulatory protein, Fis family D3H41_RS08930 PF00158 Sigma-54 interaction domain D3H41_RS08945 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain D3H41_RS08945 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D3H41_RS08950 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase D3H41_RS08955 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain D3H41_RS08955 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain D3H41_RS08960 PF02311 AraC-like ligand binding domain D3H41_RS08960 PF12833 Helix-turn-helix domain D3H41_RS08965 PF00593 TonB dependent receptor D3H41_RS08965 PF07715 TonB-dependent Receptor Plug Domain D3H41_RS08970 PF12431 Transcriptional regulator D3H41_RS08970 PF00072 Response regulator receiver domain D3H41_RS08975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS08975 PF00989 PAS fold D3H41_RS08975 PF17203 Single cache domain 3 D3H41_RS08975 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain D3H41_RS08990 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D3H41_RS09005 PF03466 LysR substrate binding domain D3H41_RS09005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS09020 PF08543 Phosphomethylpyrimidine kinase D3H41_RS09025 PF00155 Aminotransferase class I and II D3H41_RS09030 PF06826 Predicted Permease Membrane Region D3H41_RS09030 PF02080 TrkA-C domain D3H41_RS09040 PF13533 Biotin-lipoyl like D3H41_RS09055 PF00135 Carboxylesterase family D3H41_RS09060 PF13091 PLD-like domain D3H41_RS09065 PF17243 POTRA domain TamA domain 1 D3H41_RS09065 PF01103 Surface antigen D3H41_RS09070 PF11008 Protein of unknown function (DUF2846) D3H41_RS09075 PF01810 LysE type translocator D3H41_RS09080 PF01810 LysE type translocator D3H41_RS09085 PF07237 Protein of unknown function (DUF1428) D3H41_RS09105 PF01411 tRNA synthetases class II (A) D3H41_RS09105 PF02272 DHHA1 domain D3H41_RS09105 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D3H41_RS09110 PF13302 Acetyltransferase (GNAT) domain D3H41_RS09115 PF12464 Maltose acetyltransferase D3H41_RS09115 PF14602 Hexapeptide repeat of succinyl-transferase D3H41_RS09180 PF13276 HTH-like domain D3H41_RS09180 PF13333 Integrase core domain D3H41_RS09180 PF00665 Integrase core domain D3H41_RS09190 PF08274 PhnA Zinc-Ribbon D3H41_RS09190 PF03831 PhnA domain D3H41_RS09380 PF13286 Phosphohydrolase-associated domain D3H41_RS09380 PF01966 HD domain D3H41_RS09575 PF00583 Acetyltransferase (GNAT) family D3H41_RS09640 PF08241 Methyltransferase domain D3H41_RS09790 PF04463 Protein of unknown function (DUF523) D3H41_RS09795 PF00583 Acetyltransferase (GNAT) family D3H41_RS09855 PF09827 CRISPR associated protein Cas2 D3H41_RS09960 PF13495 Phage integrase, N-terminal SAM-like domain D3H41_RS09960 PF00589 Phage integrase family D3H41_RS10085 PF03864 Phage major capsid protein E D3H41_RS10095 PF01972 Serine dehydrogenase proteinase D3H41_RS10095 PF01957 NfeD-like C-terminal, partner-binding D3H41_RS10125 PF00959 Phage lysozyme D3H41_RS10160 PF06147 Protein of unknown function (DUF968) D3H41_RS10180 PF03354 Phage Terminase D3H41_RS10210 PF01381 Helix-turn-helix D3H41_RS10210 PF00717 Peptidase S24-like D3H41_RS10230 PF10065 Uncharacterized conserved protein (DUF2303) D3H41_RS10250 PF00589 Phage integrase family D3H41_RS10250 PF12167 Arm DNA-binding domain D3H41_RS10255 PF07087 Protein of unknown function (DUF1353) D3H41_RS10270 PF07516 SecA Wing and Scaffold domain D3H41_RS10270 PF01043 SecA preprotein cross-linking domain D3H41_RS10270 PF07517 SecA DEAD-like domain D3H41_RS10270 PF02810 SEC-C motif D3H41_RS10285 PF13302 Acetyltransferase (GNAT) domain D3H41_RS10290 PF00158 Sigma-54 interaction domain D3H41_RS10290 PF18024 Helix-turn-helix domain D3H41_RS10295 PF05128 Domain of unknown function (DUF697) D3H41_RS10300 PF04317 YcjX-like family, DUF463 D3H41_RS10320 PF04715 Anthranilate synthase component I, N terminal region D3H41_RS10320 PF00425 chorismate binding enzyme D3H41_RS10325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS10325 PF00072 Response regulator receiver domain D3H41_RS10325 PF09308 LuxQ, periplasmic D3H41_RS10325 PF00512 His Kinase A (phospho-acceptor) domain D3H41_RS10335 PF00293 NUDIX domain D3H41_RS10340 PF03222 Tryptophan/tyrosine permease family D3H41_RS10345 PF03315 Serine dehydratase beta chain D3H41_RS10345 PF03313 Serine dehydratase alpha chain D3H41_RS10350 PF04940 Sensors of blue-light using FAD D3H41_RS10350 PF00563 EAL domain D3H41_RS10360 PF01242 6-pyruvoyl tetrahydropterin synthase D3H41_RS10365 PF17200 Single Cache domain 2 D3H41_RS10365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_RS10365 PF00672 HAMP domain D3H41_RS10370 PF01336 OB-fold nucleic acid binding domain D3H41_RS10370 PF00152 tRNA synthetases class II (D, K and N) D3H41_RS10380 PF00155 Aminotransferase class I and II D3H41_RS10380 PF00392 Bacterial regulatory proteins, gntR family D3H41_RS10395 PF00155 Aminotransferase class I and II D3H41_RS10415 PF00672 HAMP domain D3H41_RS10415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_RS10420 PF02028 BCCT, betaine/carnitine/choline family transporter D3H41_RS10430 PF00072 Response regulator receiver domain D3H41_RS10430 PF00196 Bacterial regulatory proteins, luxR family D3H41_RS10435 PF17200 Single Cache domain 2 D3H41_RS10435 PF07730 Histidine kinase D3H41_RS10440 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D3H41_RS10450 PF03480 Bacterial extracellular solute-binding protein, family 7 D3H41_RS10465 PF00753 Metallo-beta-lactamase superfamily D3H41_RS10470 PF05951 Bacterial protein of unknown function (DUF882) D3H41_RS10475 PF03734 L,D-transpeptidase catalytic domain D3H41_RS10475 PF01471 Putative peptidoglycan binding domain D3H41_RS10500 PF00925 GTP cyclohydrolase II D3H41_RS10510 PF03918 Cytochrome C biogenesis protein D3H41_RS10515 PF08534 Redoxin D3H41_RS10520 PF01578 Cytochrome C assembly protein D3H41_RS10520 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal D3H41_RS10525 PF03916 Polysulphide reductase, NrfD D3H41_RS10530 PF13247 4Fe-4S dicluster domain D3H41_RS10540 PF02335 Cytochrome c552 D3H41_RS10555 PF00521 DNA gyrase/topoisomerase IV, subunit A D3H41_RS10555 PF03989 DNA gyrase C-terminal domain, beta-propeller D3H41_RS10565 PF03477 ATP cone domain D3H41_RS10565 PF00317 Ribonucleotide reductase, all-alpha domain D3H41_RS10565 PF02867 Ribonucleotide reductase, barrel domain D3H41_RS10570 PF00268 Ribonucleotide reductase, small chain D3H41_RS10580 PF00994 Probable molybdopterin binding domain D3H41_RS10595 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D3H41_RS10600 PF16653 Saccharopine dehydrogenase C-terminal domain D3H41_RS10600 PF03435 Saccharopine dehydrogenase NADP binding domain D3H41_RS10605 PF00202 Aminotransferase class-III D3H41_RS10630 PF01066 CDP-alcohol phosphatidyltransferase D3H41_RS10635 PF01541 GIY-YIG catalytic domain D3H41_RS10635 PF02151 UvrB/uvrC motif D3H41_RS10635 PF08459 UvrC Helix-hairpin-helix N-terminal D3H41_RS10640 PF00196 Bacterial regulatory proteins, luxR family D3H41_RS10640 PF00072 Response regulator receiver domain D3H41_RS10645 PF00136 DNA polymerase family B D3H41_RS10645 PF03104 DNA polymerase family B, exonuclease domain D3H41_RS10655 PF09285 Elongation factor P, C-terminal D3H41_RS10655 PF01132 Elongation factor P (EF-P) OB domain D3H41_RS10655 PF08207 Elongation factor P (EF-P) KOW-like domain D3H41_RS10660 PF04269 Protein of unknown function, DUF440 D3H41_RS10665 PF01479 S4 domain D3H41_RS10665 PF00849 RNA pseudouridylate synthase D3H41_RS10675 PF01300 Telomere recombination D3H41_RS10680 PF02811 PHP domain D3H41_RS10685 PF08056 Tryptophan operon leader peptide D3H41_RS10690 PF00425 chorismate binding enzyme D3H41_RS10690 PF04715 Anthranilate synthase component I, N terminal region D3H41_RS10695 PF00117 Glutamine amidotransferase class-I D3H41_RS10700 PF00591 Glycosyl transferase family, a/b domain D3H41_RS10700 PF02885 Glycosyl transferase family, helical bundle domain D3H41_RS10705 PF00218 Indole-3-glycerol phosphate synthase D3H41_RS10705 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase D3H41_RS10710 PF00291 Pyridoxal-phosphate dependent enzyme D3H41_RS10715 PF00290 Tryptophan synthase alpha chain D3H41_RS10720 PF13545 Crp-like helix-turn-helix domain D3H41_RS10720 PF00027 Cyclic nucleotide-binding domain D3H41_RS10725 PF13193 AMP-binding enzyme C-terminal domain D3H41_RS10725 PF00501 AMP-binding enzyme D3H41_RS10735 PF00375 Sodium:dicarboxylate symporter family D3H41_RS10740 PF17327 Acyl homoserine lactone synthase D3H41_RS10745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS10745 PF00072 Response regulator receiver domain D3H41_RS10755 PF04279 Intracellular septation protein A D3H41_RS10760 PF03061 Thioesterase superfamily D3H41_RS10765 PF03795 YCII-related domain D3H41_RS10775 PF08267 Cobalamin-independent synthase, N-terminal domain D3H41_RS10775 PF01717 Cobalamin-independent synthase, Catalytic domain D3H41_RS10780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS10780 PF03466 LysR substrate binding domain D3H41_RS10795 PF08448 PAS fold D3H41_RS10795 PF08447 PAS fold D3H41_RS10795 PF00990 Diguanylate cyclase, GGDEF domain D3H41_RS10795 PF00563 EAL domain D3H41_RS10800 PF04055 Radical SAM superfamily D3H41_RS10800 PF11842 Domain of unknown function (DUF3362) D3H41_RS10800 PF08497 Radical SAM N-terminal D3H41_RS10820 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase D3H41_RS10825 PF00535 Glycosyl transferase family 2 D3H41_RS10830 PF00072 Response regulator receiver domain D3H41_RS10830 PF00486 Transcriptional regulatory protein, C terminal D3H41_RS10835 PF00512 His Kinase A (phospho-acceptor) domain D3H41_RS10835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS10835 PF00672 HAMP domain D3H41_RS10855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS10855 PF03466 LysR substrate binding domain D3H41_RS10860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D3H41_RS10860 PF00529 HlyD membrane-fusion protein of T1SS D3H41_RS10870 PF01717 Cobalamin-independent synthase, Catalytic domain D3H41_RS10870 PF08267 Cobalamin-independent synthase, N-terminal domain D3H41_RS10890 PF00005 ABC transporter D3H41_RS10890 PF02687 FtsX-like permease family D3H41_RS10890 PF12704 MacB-like periplasmic core domain D3H41_RS10895 PF00005 ABC transporter D3H41_RS10895 PF02687 FtsX-like permease family D3H41_RS10895 PF12704 MacB-like periplasmic core domain D3H41_RS10900 PF12704 MacB-like periplasmic core domain D3H41_RS10900 PF02687 FtsX-like permease family D3H41_RS10900 PF00005 ABC transporter D3H41_RS10910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D3H41_RS10930 PF00085 Thioredoxin D3H41_RS10945 PF00196 Bacterial regulatory proteins, luxR family D3H41_RS10945 PF00072 Response regulator receiver domain D3H41_RS10950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS10950 PF00512 His Kinase A (phospho-acceptor) domain D3H41_RS10990 PF02683 Cytochrome C biogenesis protein transmembrane region D3H41_RS10990 PF11412 Disulphide bond corrector protein DsbC D3H41_RS10995 PF00085 Thioredoxin D3H41_RS11040 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D3H41_RS11060 PF00085 Thioredoxin D3H41_RS11065 PF11412 Disulphide bond corrector protein DsbC D3H41_RS11065 PF02683 Cytochrome C biogenesis protein transmembrane region D3H41_RS11075 PF00196 Bacterial regulatory proteins, luxR family D3H41_RS11075 PF00072 Response regulator receiver domain D3H41_RS11080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS11080 PF00512 His Kinase A (phospho-acceptor) domain D3H41_RS11085 PF13247 4Fe-4S dicluster domain D3H41_RS11090 PF03916 Polysulphide reductase, NrfD D3H41_RS11095 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D3H41_RS11095 PF00384 Molybdopterin oxidoreductase D3H41_RS11095 PF01568 Molydopterin dinucleotide binding domain D3H41_RS11100 PF00034 Cytochrome c D3H41_RS11105 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D3H41_RS11110 PF04403 Paraquat-inducible protein A D3H41_RS11115 PF02470 MlaD protein D3H41_RS11135 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3H41_RS11140 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family D3H41_RS11145 PF18073 Rubredoxin metal binding domain D3H41_RS11150 PF06305 Lipopolysaccharide assembly protein A domain D3H41_RS11155 PF00216 Bacterial DNA-binding protein D3H41_RS11160 PF00575 S1 RNA binding domain D3H41_RS11165 PF02224 Cytidylate kinase D3H41_RS11170 PF08496 Peptidase family S49 N-terminal D3H41_RS11170 PF01343 Peptidase family S49 D3H41_RS11175 PF00106 short chain dehydrogenase D3H41_RS11190 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D3H41_RS11190 PF14579 Helix-hairpin-helix motif D3H41_RS11190 PF02811 PHP domain D3H41_RS11190 PF01336 OB-fold nucleic acid binding domain D3H41_RS11190 PF07733 Bacterial DNA polymerase III alpha NTPase domain D3H41_RS11195 PF01584 CheW-like domain D3H41_RS11195 PF00072 Response regulator receiver domain D3H41_RS11200 PF00480 ROK family D3H41_RS11205 PF02887 Pyruvate kinase, alpha/beta domain D3H41_RS11205 PF00224 Pyruvate kinase, barrel domain D3H41_RS11210 PF01734 Patatin-like phospholipase D3H41_RS11225 PF00209 Sodium:neurotransmitter symporter family D3H41_RS11240 PF02378 Phosphotransferase system, EIIC D3H41_RS11240 PF00367 phosphotransferase system, EIIB D3H41_RS11245 PF01026 TatD related DNase D3H41_RS11250 PF09115 DNA polymerase III, delta subunit, C terminal D3H41_RS11255 PF02223 Thymidylate kinase D3H41_RS11260 PF02618 YceG-like family D3H41_RS11265 PF01063 Amino-transferase class IV D3H41_RS11270 PF02801 Beta-ketoacyl synthase, C-terminal domain D3H41_RS11270 PF00109 Beta-ketoacyl synthase, N-terminal domain D3H41_RS11275 PF00550 Phosphopantetheine attachment site D3H41_RS11285 PF00698 Acyl transferase domain D3H41_RS11290 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D3H41_RS11290 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D3H41_RS11295 PF02504 Fatty acid synthesis protein D3H41_RS11300 PF01783 Ribosomal L32p protein family D3H41_RS11305 PF02620 Large ribosomal RNA subunit accumulation protein YceD D3H41_RS11310 PF02545 Maf-like protein D3H41_RS11315 PF01479 S4 domain D3H41_RS11315 PF00849 RNA pseudouridylate synthase D3H41_RS11325 PF12111 Polyribonucleotide phosphorylase C terminal D3H41_RS11325 PF10150 Ribonuclease E/G family D3H41_RS11325 PF00575 S1 RNA binding domain D3H41_RS11335 PF00916 Sulfate permease family D3H41_RS11335 PF01740 STAS domain D3H41_RS11340 PF01451 Low molecular weight phosphotyrosine protein phosphatase D3H41_RS11345 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP D3H41_RS11345 PF12557 Cob(I)alamin adenosyltransferase N terminal D3H41_RS11355 PF00485 Phosphoribulokinase / Uridine kinase family D3H41_RS11360 PF10609 NUBPL iron-transfer P-loop NTPase D3H41_RS11365 PF01588 Putative tRNA binding domain D3H41_RS11365 PF09334 tRNA synthetases class I (M) D3H41_RS11385 PF00392 Bacterial regulatory proteins, gntR family D3H41_RS11385 PF07840 FadR C-terminal domain D3H41_RS11390 PF06450 Bacterial Na+/H+ antiporter B (NhaB) D3H41_RS11395 PF02600 Disulfide bond formation protein DsbB D3H41_RS11400 PF03695 Uncharacterised protein family (UPF0149) D3H41_RS11400 PF02810 SEC-C motif D3H41_RS11405 PF01207 Dihydrouridine synthase (Dus) D3H41_RS11410 PF00990 Diguanylate cyclase, GGDEF domain D3H41_RS11410 PF17158 Membrane-associated sensor, integral membrane domain D3H41_RS11415 PF02903 Alpha amylase, N-terminal ig-like domain D3H41_RS11415 PF00128 Alpha amylase, catalytic domain D3H41_RS11420 PF00005 ABC transporter D3H41_RS11425 PF02653 Branched-chain amino acid transport system / permease component D3H41_RS11435 PF04217 Protein of unknown function, DUF412 D3H41_RS11440 PF00871 Acetokinase family D3H41_RS11445 PF01515 Phosphate acetyl/butaryl transferase D3H41_RS11445 PF07085 DRTGG domain D3H41_RS11455 PF13409 Glutathione S-transferase, N-terminal domain D3H41_RS11460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3H41_RS11460 PF00005 ABC transporter D3H41_RS11465 PF00005 ABC transporter D3H41_RS11465 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3H41_RS11470 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS11470 PF12911 N-terminal TM domain of oligopeptide transport permease C D3H41_RS11475 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS11480 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3H41_RS11485 PF02391 MoaE protein D3H41_RS11490 PF02597 ThiS family D3H41_RS11495 PF01967 MoaC family D3H41_RS11500 PF00994 Probable molybdopterin binding domain D3H41_RS11505 PF04055 Radical SAM superfamily D3H41_RS11505 PF06463 Molybdenum Cofactor Synthesis C D3H41_RS11510 PF01933 Uncharacterised protein family UPF0052 D3H41_RS11515 PF01627 Hpt domain D3H41_RS11520 PF00158 Sigma-54 interaction domain D3H41_RS11520 PF02954 Bacterial regulatory protein, Fis family D3H41_RS11520 PF00072 Response regulator receiver domain D3H41_RS11525 PF00271 Helicase conserved C-terminal domain D3H41_RS11525 PF04851 Type III restriction enzyme, res subunit D3H41_RS11525 PF02151 UvrB/uvrC motif D3H41_RS11525 PF12344 Ultra-violet resistance protein B D3H41_RS11525 PF17757 UvrB interaction domain D3H41_RS11535 PF02901 Pyruvate formate lyase-like D3H41_RS11535 PF01228 Glycine radical D3H41_RS11540 PF02508 Rnf-Nqr subunit, membrane protein D3H41_RS11545 PF04060 Putative Fe-S cluster D3H41_RS11550 PF13375 RnfC Barrel sandwich hybrid domain D3H41_RS11550 PF10531 SLBB domain D3H41_RS11550 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit D3H41_RS11550 PF12838 4Fe-4S dicluster domain D3H41_RS11555 PF03116 NQR2, RnfD, RnfE family D3H41_RS11560 PF04205 FMN-binding domain D3H41_RS11565 PF02508 Rnf-Nqr subunit, membrane protein D3H41_RS11570 PF00730 HhH-GPD superfamily base excision DNA repair protein D3H41_RS11570 PF10576 Iron-sulfur binding domain of endonuclease III D3H41_RS11570 PF00633 Helix-hairpin-helix motif D3H41_RS11575 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D3H41_RS11580 PF10952 Protein of unknown function (DUF2753) D3H41_RS11585 PF18393 MotY N-terminal domain D3H41_RS11585 PF00691 OmpA family D3H41_RS11595 PF00929 Exonuclease D3H41_RS11600 PF03553 Na+/H+ antiporter family D3H41_RS11600 PF13726 Na+-H+ antiporter family D3H41_RS11620 PF00462 Glutaredoxin D3H41_RS11625 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D3H41_RS11625 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D3H41_RS11640 PF00465 Iron-containing alcohol dehydrogenase D3H41_RS11640 PF00171 Aldehyde dehydrogenase family D3H41_RS11645 PF01914 MarC family integral membrane protein D3H41_RS11650 PF00027 Cyclic nucleotide-binding domain D3H41_RS11650 PF00520 Ion transport protein D3H41_RS11655 PF02774 Semialdehyde dehydrogenase, dimerisation domain D3H41_RS11655 PF01118 Semialdehyde dehydrogenase, NAD binding domain D3H41_RS11660 PF03553 Na+/H+ antiporter family D3H41_RS11675 PF04245 37-kD nucleoid-associated bacterial protein D3H41_RS11680 PF07208 Protein of unknown function (DUF1414) D3H41_RS11685 PF00884 Sulfatase D3H41_RS11685 PF11893 Domain of unknown function (DUF3413) D3H41_RS11695 PF00850 Histone deacetylase domain D3H41_RS11700 PF00106 short chain dehydrogenase D3H41_RS11710 PF01751 Toprim domain D3H41_RS11710 PF01131 DNA topoisomerase D3H41_RS11715 PF00881 Nitroreductase family D3H41_RS11725 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3H41_RS11725 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D3H41_RS11730 PF01343 Peptidase family S49 D3H41_RS11735 PF17763 Glutaminase/Asparaginase C-terminal domain D3H41_RS11735 PF00710 Asparaginase, N-terminal D3H41_RS11740 PF07023 Protein of unknown function (DUF1315) D3H41_RS11750 PF01641 SelR domain D3H41_RS11755 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D3H41_RS11755 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D3H41_RS11760 PF01263 Aldose 1-epimerase D3H41_RS11765 PF13426 PAS domain D3H41_RS11765 PF08447 PAS fold D3H41_RS11765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_RS11770 PF13847 Methyltransferase domain D3H41_RS11790 PF00245 Alkaline phosphatase D3H41_RS11800 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D3H41_RS11805 PF03992 Antibiotic biosynthesis monooxygenase D3H41_RS11810 PF00924 Mechanosensitive ion channel D3H41_RS11810 PF05552 Conserved TM helix D3H41_RS11815 PF03692 Putative zinc- or iron-chelating domain D3H41_RS11820 PF04226 Transglycosylase associated protein D3H41_RS11825 PF03692 Putative zinc- or iron-chelating domain D3H41_RS11830 PF00230 Major intrinsic protein D3H41_RS11835 PF02132 RecR protein D3H41_RS11835 PF13662 Toprim domain D3H41_RS11840 PF02575 YbaB/EbfC DNA-binding family D3H41_RS11845 PF12169 DNA polymerase III subunits gamma and tau domain III D3H41_RS11845 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding D3H41_RS11845 PF12170 DNA polymerase III tau subunit V interacting with alpha D3H41_RS11850 PF00156 Phosphoribosyl transferase domain D3H41_RS11855 PF04304 Protein of unknown function (DUF454) D3H41_RS11865 PF00072 Response regulator receiver domain D3H41_RS11870 PF03466 LysR substrate binding domain D3H41_RS11870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS11875 PF00156 Phosphoribosyl transferase domain D3H41_RS11880 PF02674 Colicin V production protein D3H41_RS11885 PF05036 Sporulation related domain D3H41_RS11890 PF08245 Mur ligase middle domain D3H41_RS11890 PF02875 Mur ligase family, glutamate ligase domain D3H41_RS11895 PF01039 Carboxyl transferase domain D3H41_RS11895 PF17848 Acetyl-coA carboxylase zinc finger domain D3H41_RS11905 PF01416 tRNA pseudouridine synthase D3H41_RS11915 PF02774 Semialdehyde dehydrogenase, dimerisation domain D3H41_RS11915 PF01118 Semialdehyde dehydrogenase, NAD binding domain D3H41_RS11920 PF11890 Domain of unknown function (DUF3410) D3H41_RS11920 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D3H41_RS11920 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D3H41_RS11930 PF00109 Beta-ketoacyl synthase, N-terminal domain D3H41_RS11930 PF02801 Beta-ketoacyl synthase, C-terminal domain D3H41_RS11935 PF01266 FAD dependent oxidoreductase D3H41_RS11935 PF05430 S-adenosyl-L-methionine-dependent methyltransferase D3H41_RS11940 PF03358 NADPH-dependent FMN reductase D3H41_RS11950 PF08891 YfcL protein D3H41_RS11955 PF04315 Elongation factor P hydroxylase D3H41_RS11965 PF03458 UPF0126 domain D3H41_RS11970 PF01264 Chorismate synthase D3H41_RS11975 PF05175 Methyltransferase small domain D3H41_RS11980 PF01713 Smr domain D3H41_RS11985 PF00300 Histidine phosphatase superfamily (branch 1) D3H41_RS11990 PF00675 Insulinase (Peptidase family M16) D3H41_RS11990 PF05193 Peptidase M16 inactive domain D3H41_RS11990 PF16187 Middle or third domain of peptidase_M16 D3H41_RS12000 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D3H41_RS12000 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D3H41_RS12000 PF00378 Enoyl-CoA hydratase/isomerase D3H41_RS12005 PF00108 Thiolase, N-terminal domain D3H41_RS12005 PF02803 Thiolase, C-terminal domain D3H41_RS12015 PF04542 Sigma-70 region 2 D3H41_RS12015 PF08281 Sigma-70, region 4 D3H41_RS12025 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D3H41_RS12030 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D3H41_RS12035 PF04333 MlaA lipoprotein D3H41_RS12040 PF03918 Cytochrome C biogenesis protein D3H41_RS12045 PF03918 Cytochrome C biogenesis protein D3H41_RS12050 PF08534 Redoxin D3H41_RS12055 PF01578 Cytochrome C assembly protein D3H41_RS12055 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal D3H41_RS12060 PF03100 CcmE D3H41_RS12065 PF04995 Heme exporter protein D (CcmD) D3H41_RS12070 PF01578 Cytochrome C assembly protein D3H41_RS12075 PF03379 CcmB protein D3H41_RS12080 PF00005 ABC transporter D3H41_RS12090 PF01584 CheW-like domain D3H41_RS12100 PF13614 AAA domain D3H41_RS12105 PF00072 Response regulator receiver domain D3H41_RS12105 PF01339 CheB methylesterase D3H41_RS12110 PF00072 Response regulator receiver domain D3H41_RS12110 PF01627 Hpt domain D3H41_RS12110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS12110 PF02895 Signal transducing histidine kinase, homodimeric domain D3H41_RS12110 PF01584 CheW-like domain D3H41_RS12115 PF04344 Chemotaxis phosphatase, CheZ D3H41_RS12120 PF00072 Response regulator receiver domain D3H41_RS12125 PF04542 Sigma-70 region 2 D3H41_RS12125 PF04539 Sigma-70 region 3 D3H41_RS12125 PF04545 Sigma-70, region 4 D3H41_RS12130 PF10609 NUBPL iron-transfer P-loop NTPase D3H41_RS12135 PF00448 SRP54-type protein, GTPase domain D3H41_RS12140 PF00771 FHIPEP family D3H41_RS12145 PF01312 FlhB HrpN YscU SpaS Family D3H41_RS12150 PF01311 Bacterial export proteins, family 1 D3H41_RS12155 PF01313 Bacterial export proteins, family 3 D3H41_RS12160 PF00813 FliP family D3H41_RS12165 PF04347 Flagellar biosynthesis protein, FliO D3H41_RS12170 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D3H41_RS12175 PF02154 Flagellar motor switch protein FliM D3H41_RS12175 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D3H41_RS12200 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D3H41_RS12200 PF18269 T3SS EscN ATPase C-terminal domain D3H41_RS12210 PF14842 FliG N-terminal domain D3H41_RS12210 PF01706 FliG C-terminal domain D3H41_RS12210 PF14841 FliG middle domain D3H41_RS12215 PF01514 Secretory protein of YscJ/FliF family D3H41_RS12215 PF08345 Flagellar M-ring protein C-terminal D3H41_RS12220 PF02049 Flagellar hook-basal body complex protein FliE D3H41_RS12225 PF02954 Bacterial regulatory protein, Fis family D3H41_RS12225 PF00072 Response regulator receiver domain D3H41_RS12225 PF00158 Sigma-54 interaction domain D3H41_RS12230 PF00512 His Kinase A (phospho-acceptor) domain D3H41_RS12230 PF13188 PAS domain D3H41_RS12230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS12235 PF06490 Flagellar regulatory protein FleQ D3H41_RS12235 PF00158 Sigma-54 interaction domain D3H41_RS12235 PF02954 Bacterial regulatory protein, Fis family D3H41_RS12240 PF02561 Flagellar protein FliS D3H41_RS12250 PF07195 Flagellar hook-associated protein 2 C-terminus D3H41_RS12250 PF07196 Flagellin hook IN motif D3H41_RS12250 PF02465 Flagellar hook-associated protein 2 N-terminus D3H41_RS12255 PF03646 FlaG protein D3H41_RS12260 PF00669 Bacterial flagellin N-terminal helical region D3H41_RS12260 PF07196 Flagellin hook IN motif D3H41_RS12260 PF00700 Bacterial flagellin C-terminal helical region D3H41_RS12265 PF00700 Bacterial flagellin C-terminal helical region D3H41_RS12265 PF07196 Flagellin hook IN motif D3H41_RS12265 PF00669 Bacterial flagellin N-terminal helical region D3H41_RS12275 PF00669 Bacterial flagellin N-terminal helical region D3H41_RS12275 PF07196 Flagellin hook IN motif D3H41_RS12275 PF00700 Bacterial flagellin C-terminal helical region D3H41_RS12280 PF04261 Dyp-type peroxidase family D3H41_RS12285 PF11143 Protein of unknown function (DUF2919) D3H41_RS12305 PF03960 ArsC family D3H41_RS12310 PF01546 Peptidase family M20/M25/M40 D3H41_RS12310 PF07687 Peptidase dimerisation domain D3H41_RS12325 PF06804 NlpB/DapX lipoprotein D3H41_RS12330 PF00701 Dihydrodipicolinate synthetase family D3H41_RS12340 PF00578 AhpC/TSA family D3H41_RS12345 PF01594 AI-2E family transporter D3H41_RS12355 PF01435 Peptidase family M48 D3H41_RS12355 PF13181 Tetratricopeptide repeat D3H41_RS12360 PF03960 ArsC family D3H41_RS12365 PF03358 NADPH-dependent FMN reductase D3H41_RS12380 PF00860 Permease family D3H41_RS12390 PF00586 AIR synthase related protein, N-terminal domain D3H41_RS12390 PF02769 AIR synthase related protein, C-terminal domain D3H41_RS12395 PF00551 Formyl transferase D3H41_RS12400 PF13230 Glutamine amidotransferases class-II D3H41_RS12405 PF13580 SIS domain D3H41_RS12410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D3H41_RS12410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D3H41_RS12410 PF09317 Domain of unknown function (DUF1974) D3H41_RS12410 PF02770 Acyl-CoA dehydrogenase, middle domain D3H41_RS12415 PF01740 STAS domain D3H41_RS12415 PF00916 Sulfate permease family D3H41_RS12440 PF00929 Exonuclease D3H41_RS12445 PF00075 RNase H D3H41_RS12450 PF08241 Methyltransferase domain D3H41_RS12455 PF16123 Hydroxyacylglutathione hydrolase C-terminus D3H41_RS12455 PF00753 Metallo-beta-lactamase superfamily D3H41_RS12460 PF01464 Transglycosylase SLT domain D3H41_RS12460 PF01476 LysM domain D3H41_RS12470 PF03372 Endonuclease/Exonuclease/phosphatase family D3H41_RS12475 PF00543 Nitrogen regulatory protein P-II D3H41_RS12480 PF00034 Cytochrome c D3H41_RS12485 PF11734 TilS substrate C-terminal domain D3H41_RS12485 PF09179 TilS substrate binding domain D3H41_RS12485 PF01171 PP-loop family D3H41_RS12490 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit D3H41_RS12495 PF07733 Bacterial DNA polymerase III alpha NTPase domain D3H41_RS12495 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D3H41_RS12495 PF14579 Helix-hairpin-helix motif D3H41_RS12495 PF02811 PHP domain D3H41_RS12495 PF01336 OB-fold nucleic acid binding domain D3H41_RS12500 PF01351 Ribonuclease HII D3H41_RS12505 PF02684 Lipid-A-disaccharide synthetase D3H41_RS12510 PF00132 Bacterial transferase hexapeptide (six repeats) D3H41_RS12510 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 D3H41_RS12515 PF07977 FabA-like domain D3H41_RS12520 PF00132 Bacterial transferase hexapeptide (six repeats) D3H41_RS12520 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD D3H41_RS12525 PF03938 Outer membrane protein (OmpH-like) D3H41_RS12530 PF01103 Surface antigen D3H41_RS12530 PF07244 Surface antigen variable number repeat D3H41_RS12535 PF02163 Peptidase family M50 D3H41_RS12535 PF17820 PDZ domain D3H41_RS12540 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain D3H41_RS12540 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase D3H41_RS12540 PF13288 DXP reductoisomerase C-terminal domain D3H41_RS12550 PF01255 Putative undecaprenyl diphosphate synthase D3H41_RS12555 PF01765 Ribosome recycling factor D3H41_RS12560 PF00696 Amino acid kinase family D3H41_RS12565 PF00889 Elongation factor TS D3H41_RS12570 PF00318 Ribosomal protein S2 D3H41_RS12575 PF00557 Metallopeptidase family M24 D3H41_RS12580 PF01966 HD domain D3H41_RS12580 PF01909 Nucleotidyltransferase domain D3H41_RS12580 PF08335 GlnD PII-uridylyltransferase D3H41_RS12580 PF01842 ACT domain D3H41_RS12585 PF11944 Protein of unknown function (DUF3461) D3H41_RS12590 PF00849 RNA pseudouridylate synthase D3H41_RS12595 PF04287 tRNA pseudouridine synthase C D3H41_RS12625 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 D3H41_RS12630 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D3H41_RS12630 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D3H41_RS12635 PF01370 NAD dependent epimerase/dehydratase family D3H41_RS12660 PF03806 AbgT putative transporter family D3H41_RS12665 PF00444 Ribosomal protein L36 D3H41_RS12670 PF01197 Ribosomal protein L31 D3H41_RS12675 PF01980 tRNA-methyltransferase O D3H41_RS12675 PF18389 TrmO C-terminal domain D3H41_RS12680 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D3H41_RS12680 PF04073 Aminoacyl-tRNA editing domain D3H41_RS12680 PF03129 Anticodon binding domain D3H41_RS12690 PF06786 Uncharacterised protein family (UPF0253) D3H41_RS12700 PF00209 Sodium:neurotransmitter symporter family D3H41_RS12705 PF06483 Chitinase C D3H41_RS12705 PF00704 Glycosyl hydrolases family 18 D3H41_RS12715 PF01272 Transcription elongation factor, GreA/GreB, C-term D3H41_RS12715 PF03449 Transcription elongation factor, N-terminal D3H41_RS12720 PF00570 HRDC domain D3H41_RS12720 PF00270 DEAD/DEAH box helicase D3H41_RS12720 PF09382 RQC domain D3H41_RS12720 PF16124 RecQ zinc-binding D3H41_RS12720 PF00271 Helicase conserved C-terminal domain D3H41_RS12725 PF00817 impB/mucB/samB family D3H41_RS12725 PF11798 IMS family HHH motif D3H41_RS12725 PF11799 impB/mucB/samB family C-terminal domain D3H41_RS12735 PF00072 Response regulator receiver domain D3H41_RS12735 PF00990 Diguanylate cyclase, GGDEF domain D3H41_RS12745 PF02424 ApbE family D3H41_RS12750 PF00175 Oxidoreductase NAD-binding domain D3H41_RS12750 PF00111 2Fe-2S iron-sulfur cluster binding domain D3H41_RS12750 PF00970 Oxidoreductase FAD-binding domain D3H41_RS12755 PF02508 Rnf-Nqr subunit, membrane protein D3H41_RS12760 PF02508 Rnf-Nqr subunit, membrane protein D3H41_RS12765 PF04205 FMN-binding domain D3H41_RS12770 PF03116 NQR2, RnfD, RnfE family D3H41_RS12775 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) D3H41_RS12775 PF11973 NQRA C-terminal domain D3H41_RS12780 PF01722 BolA-like protein D3H41_RS12785 PF05175 Methyltransferase small domain D3H41_RS12790 PF03923 Uncharacterized lipoprotein D3H41_RS12790 PF08139 Prokaryotic membrane lipoprotein lipid attachment site D3H41_RS12795 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D3H41_RS12800 PF07690 Major Facilitator Superfamily D3H41_RS12810 PF04542 Sigma-70 region 2 D3H41_RS12810 PF04545 Sigma-70, region 4 D3H41_RS12830 PF03502 Nucleoside-specific channel-forming protein, Tsx D3H41_RS12835 PF08546 Ketopantoate reductase PanE/ApbA C terminal D3H41_RS12835 PF02558 Ketopantoate reductase PanE/ApbA D3H41_RS12840 PF01965 DJ-1/PfpI family D3H41_RS12845 PF00266 Aminotransferase class-V D3H41_RS12850 PF00990 Diguanylate cyclase, GGDEF domain D3H41_RS12850 PF17158 Membrane-associated sensor, integral membrane domain D3H41_RS12855 PF02657 Fe-S metabolism associated domain D3H41_RS12860 PF00899 ThiF family D3H41_RS12865 PF06725 3D domain D3H41_RS12865 PF03562 MltA specific insert domain D3H41_RS12880 PF00583 Acetyltransferase (GNAT) family D3H41_RS12880 PF00696 Amino acid kinase family D3H41_RS12900 PF13538 UvrD-like helicase C-terminal domain D3H41_RS12905 PF13361 UvrD-like helicase C-terminal domain D3H41_RS12905 PF00580 UvrD/REP helicase N-terminal domain D3H41_RS12905 PF12705 PD-(D/E)XK nuclease superfamily D3H41_RS12910 PF17946 RecC C-terminal domain D3H41_RS12915 PF11893 Domain of unknown function (DUF3413) D3H41_RS12915 PF00884 Sulfatase D3H41_RS12925 PF03466 LysR substrate binding domain D3H41_RS12925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS12930 PF07130 YebG protein D3H41_RS12945 PF14602 Hexapeptide repeat of succinyl-transferase D3H41_RS12945 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle D3H41_RS12950 PF03009 Glycerophosphoryl diester phosphodiesterase family D3H41_RS12955 PF07690 Major Facilitator Superfamily D3H41_RS12965 PF00230 Major intrinsic protein D3H41_RS12970 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D3H41_RS12970 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D3H41_RS12975 PF00455 DeoR C terminal sensor domain D3H41_RS12975 PF08220 DeoR-like helix-turn-helix domain D3H41_RS12980 PF16901 C-terminal domain of alpha-glycerophosphate oxidase D3H41_RS12980 PF01266 FAD dependent oxidoreductase D3H41_RS12985 PF01544 CorA-like Mg2+ transporter protein D3H41_RS13005 PF00356 Bacterial regulatory proteins, lacI family D3H41_RS13010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS13010 PF03466 LysR substrate binding domain D3H41_RS13040 PF00437 Type II/IV secretion system protein D3H41_RS13070 PF04972 BON domain D3H41_RS13070 PF00263 Bacterial type II and III secretion system protein D3H41_RS13070 PF13629 Pilus formation protein N terminal region D3H41_RS13095 PF02805 Metal binding domain of Ada D3H41_RS13095 PF12833 Helix-turn-helix domain D3H41_RS13100 PF00501 AMP-binding enzyme D3H41_RS13110 PF03466 LysR substrate binding domain D3H41_RS13110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS13115 PF03764 Elongation factor G, domain IV D3H41_RS13115 PF00009 Elongation factor Tu GTP binding domain D3H41_RS13115 PF03144 Elongation factor Tu domain 2 D3H41_RS13115 PF00679 Elongation factor G C-terminus D3H41_RS13115 PF14492 Elongation Factor G, domain II D3H41_RS13120 PF18073 Rubredoxin metal binding domain D3H41_RS13130 PF18429 Domain of unknown function (DUF5609) D3H41_RS13140 PF01048 Phosphorylase superfamily D3H41_RS13145 PF01676 Metalloenzyme superfamily D3H41_RS13150 PF00591 Glycosyl transferase family, a/b domain D3H41_RS13150 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain D3H41_RS13150 PF02885 Glycosyl transferase family, helical bundle domain D3H41_RS13155 PF01791 DeoC/LacD family aldolase D3H41_RS13160 PF07662 Na+ dependent nucleoside transporter C-terminus D3H41_RS13160 PF01773 Na+ dependent nucleoside transporter N-terminus D3H41_RS13160 PF07670 Nucleoside recognition D3H41_RS13165 PF01026 TatD related DNase D3H41_RS13175 PF03144 Elongation factor Tu domain 2 D3H41_RS13175 PF00009 Elongation factor Tu GTP binding domain D3H41_RS13175 PF16658 Class II release factor RF3, C-terminal domain D3H41_RS13195 PF13508 Acetyltransferase (GNAT) domain D3H41_RS13200 PF02036 SCP-2 sterol transfer family D3H41_RS13210 PF03707 Bacterial signalling protein N terminal repeat D3H41_RS13210 PF00563 EAL domain D3H41_RS13210 PF00990 Diguanylate cyclase, GGDEF domain D3H41_RS13215 PF01136 Peptidase family U32 D3H41_RS13220 PF01136 Peptidase family U32 D3H41_RS13225 PF01554 MatE D3H41_RS13235 PF13181 Tetratricopeptide repeat D3H41_RS13235 PF07719 Tetratricopeptide repeat D3H41_RS13240 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain D3H41_RS13240 PF00013 KH domain D3H41_RS13240 PF00575 S1 RNA binding domain D3H41_RS13240 PF03725 3' exoribonuclease family, domain 2 D3H41_RS13240 PF01138 3' exoribonuclease family, domain 1 D3H41_RS13245 PF00312 Ribosomal protein S15 D3H41_RS13250 PF16198 tRNA pseudouridylate synthase B C-terminal domain D3H41_RS13250 PF09157 Pseudouridine synthase II TruB, C-terminal D3H41_RS13250 PF01509 TruB family pseudouridylate synthase (N terminal domain) D3H41_RS13255 PF02033 Ribosome-binding factor A D3H41_RS13260 PF04760 Translation initiation factor IF-2, N-terminal region D3H41_RS13260 PF08364 Bacterial translation initiation factor IF-2 associated region D3H41_RS13260 PF00009 Elongation factor Tu GTP binding domain D3H41_RS13260 PF11987 Translation-initiation factor 2 D3H41_RS13265 PF13184 NusA-like KH domain D3H41_RS13265 PF00575 S1 RNA binding domain D3H41_RS13265 PF08529 NusA N-terminal domain D3H41_RS13270 PF02576 RimP N-terminal domain D3H41_RS13270 PF17384 RimP C-terminal SH3 domain D3H41_RS13285 PF03840 Preprotein translocase SecG subunit D3H41_RS13295 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D3H41_RS13295 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D3H41_RS13295 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D3H41_RS13295 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D3H41_RS13300 PF00809 Pterin binding enzyme D3H41_RS13305 PF00004 ATPase family associated with various cellular activities (AAA) D3H41_RS13305 PF06480 FtsH Extracellular D3H41_RS13305 PF01434 Peptidase family M41 D3H41_RS13305 PF17862 AAA+ lid domain D3H41_RS13310 PF01728 FtsJ-like methyltransferase D3H41_RS13315 PF01985 CRS1 / YhbY (CRM) domain D3H41_RS13320 PF01272 Transcription elongation factor, GreA/GreB, C-term D3H41_RS13320 PF03449 Transcription elongation factor, N-terminal D3H41_RS13325 PF13609 Gram-negative porin D3H41_RS13330 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family D3H41_RS13340 PF00579 tRNA synthetases class I (W and Y) D3H41_RS13345 PF01476 LysM domain D3H41_RS13345 PF01551 Peptidase family M23 D3H41_RS13345 PF08525 Opacity-associated protein A N-terminal motif D3H41_RS13350 PF00873 AcrB/AcrD/AcrF family D3H41_RS13360 PF01521 Iron-sulphur cluster biosynthesis D3H41_RS13365 PF00202 Aminotransferase class-III D3H41_RS13370 PF01594 AI-2E family transporter D3H41_RS13375 PF08468 Methyltransferase small domain N-terminal D3H41_RS13375 PF05175 Methyltransferase small domain D3H41_RS13380 PF09308 LuxQ, periplasmic D3H41_RS13380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS13380 PF00512 His Kinase A (phospho-acceptor) domain D3H41_RS13380 PF00072 Response regulator receiver domain D3H41_RS13385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3H41_RS13390 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS13395 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS13395 PF12911 N-terminal TM domain of oligopeptide transport permease C D3H41_RS13400 PF00005 ABC transporter D3H41_RS13400 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3H41_RS13405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3H41_RS13405 PF00005 ABC transporter D3H41_RS13415 PF01869 BadF/BadG/BcrA/BcrD ATPase family D3H41_RS13420 PF02838 Glycosyl hydrolase family 20, domain 2 D3H41_RS13420 PF00728 Glycosyl hydrolase family 20, catalytic domain D3H41_RS13425 PF06165 Glycosyltransferase family 36 D3H41_RS13425 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain D3H41_RS13430 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D3H41_RS13430 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D3H41_RS13430 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D3H41_RS13430 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D3H41_RS13435 PF08402 TOBE domain D3H41_RS13435 PF00005 ABC transporter D3H41_RS13445 PF13416 Bacterial extracellular solute-binding protein D3H41_RS13450 PF00909 Ammonium Transporter Family D3H41_RS13455 PF00543 Nitrogen regulatory protein P-II D3H41_RS13460 PF06062 Uncharacterised protein family (UPF0231) D3H41_RS13465 PF11791 Aconitate B N-terminal domain D3H41_RS13465 PF06434 Aconitate hydratase 2 N-terminus D3H41_RS13465 PF00330 Aconitase family (aconitate hydratase) D3H41_RS13470 PF01734 Patatin-like phospholipase D3H41_RS13475 PF14814 Bifunctional transglycosylase second domain D3H41_RS13475 PF00912 Transglycosylase D3H41_RS13475 PF00905 Penicillin binding protein transpeptidase domain D3H41_RS13480 PF04408 Helicase associated domain (HA2) D3H41_RS13480 PF00271 Helicase conserved C-terminal domain D3H41_RS13480 PF08482 ATP-dependent helicase C-terminal D3H41_RS13480 PF00270 DEAD/DEAH box helicase D3H41_RS13485 PF03749 Sugar fermentation stimulation protein RE domain D3H41_RS13485 PF17746 SfsA N-terminal OB domain D3H41_RS13490 PF01258 Prokaryotic dksA/traR C4-type zinc finger D3H41_RS13495 PF00749 tRNA synthetases class I (E and Q), catalytic domain D3H41_RS13500 PF12626 Polymerase A arginine-rich C-terminus D3H41_RS13500 PF12627 Probable RNA and SrmB- binding site of polymerase A D3H41_RS13500 PF01743 Poly A polymerase head domain D3H41_RS13505 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) D3H41_RS13510 PF02548 Ketopantoate hydroxymethyltransferase D3H41_RS13515 PF02569 Pantoate-beta-alanine ligase D3H41_RS13520 PF03279 Bacterial lipid A biosynthesis acyltransferase D3H41_RS13530 PF01061 ABC-2 type transporter D3H41_RS13535 PF00005 ABC transporter D3H41_RS13540 PF01740 STAS domain D3H41_RS13540 PF00916 Sulfate permease family D3H41_RS13545 PF00484 Carbonic anhydrase D3H41_RS13550 PF00156 Phosphoribosyl transferase domain D3H41_RS13555 PF00440 Bacterial regulatory proteins, tetR family D3H41_RS13560 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D3H41_RS13560 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3H41_RS13565 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D3H41_RS13565 PF00364 Biotin-requiring enzyme D3H41_RS13565 PF02817 e3 binding domain D3H41_RS13570 PF00456 Transketolase, thiamine diphosphate binding domain D3H41_RS13570 PF17831 Pyruvate dehydrogenase E1 component middle domain D3H41_RS13575 PF00392 Bacterial regulatory proteins, gntR family D3H41_RS13575 PF07729 FCD domain D3H41_RS13580 PF01510 N-acetylmuramoyl-L-alanine amidase D3H41_RS13585 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain D3H41_RS13585 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain D3H41_RS13590 PF07963 Prokaryotic N-terminal methylation motif D3H41_RS13590 PF00114 Pilin (bacterial filament) D3H41_RS13595 PF00437 Type II/IV secretion system protein D3H41_RS13595 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain D3H41_RS13600 PF00482 Type II secretion system (T2SS), protein F D3H41_RS13605 PF06750 Bacterial Peptidase A24 N-terminal domain D3H41_RS13605 PF01478 Type IV leader peptidase family D3H41_RS13610 PF01121 Dephospho-CoA kinase D3H41_RS13615 PF07072 Cell division protein D3H41_RS13620 PF03884 DNA gyrase inhibitor YacG D3H41_RS13625 PF01245 Ribosomal protein L19 D3H41_RS13630 PF01746 tRNA (Guanine-1)-methyltransferase D3H41_RS13635 PF01782 RimM N-terminal domain D3H41_RS13635 PF05239 PRC-barrel domain D3H41_RS13640 PF00886 Ribosomal protein S16 D3H41_RS13645 PF00448 SRP54-type protein, GTPase domain D3H41_RS13645 PF02881 SRP54-type protein, helical bundle domain D3H41_RS13645 PF02978 Signal peptide binding domain D3H41_RS13650 PF01578 Cytochrome C assembly protein D3H41_RS13655 PF01595 Cyclin M transmembrane N-terminal domain D3H41_RS13655 PF00571 CBS domain D3H41_RS13655 PF03471 Transporter associated domain D3H41_RS13660 PF02664 S-Ribosylhomocysteinase (LuxS) D3H41_RS13670 PF04262 Glutamate-cysteine ligase D3H41_RS13675 PF05193 Peptidase M16 inactive domain D3H41_RS13675 PF00675 Insulinase (Peptidase family M16) D3H41_RS13680 PF09335 SNARE associated Golgi protein D3H41_RS13685 PF00107 Zinc-binding dehydrogenase D3H41_RS13685 PF08240 Alcohol dehydrogenase GroES-like domain D3H41_RS13690 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit D3H41_RS13695 PF02436 Conserved carboxylase domain D3H41_RS13695 PF00682 HMGL-like D3H41_RS13695 PF00364 Biotin-requiring enzyme D3H41_RS13700 PF04277 Oxaloacetate decarboxylase, gamma chain D3H41_RS13755 PF02599 Global regulator protein family D3H41_RS13760 PF01842 ACT domain D3H41_RS13760 PF13840 ACT domain D3H41_RS13760 PF00696 Amino acid kinase family D3H41_RS13765 PF01411 tRNA synthetases class II (A) D3H41_RS13765 PF02272 DHHA1 domain D3H41_RS13765 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D3H41_RS13770 PF02631 RecX family D3H41_RS13780 PF00154 recA bacterial DNA recombination protein D3H41_RS13785 PF02464 Competence-damaged protein D3H41_RS13790 PF01624 MutS domain I D3H41_RS13790 PF00488 MutS domain V D3H41_RS13790 PF05190 MutS family domain IV D3H41_RS13790 PF05192 MutS domain III D3H41_RS13790 PF05188 MutS domain II D3H41_RS13795 PF00140 Sigma-70 factor, region 1.2 D3H41_RS13795 PF04542 Sigma-70 region 2 D3H41_RS13795 PF04539 Sigma-70 region 3 D3H41_RS13795 PF04545 Sigma-70, region 4 D3H41_RS13800 PF01476 LysM domain D3H41_RS13800 PF01551 Peptidase family M23 D3H41_RS13810 PF01975 Survival protein SurE D3H41_RS13815 PF01142 tRNA pseudouridine synthase D (TruD) D3H41_RS13820 PF02542 YgbB family D3H41_RS13825 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase D3H41_RS13830 PF04977 Septum formation initiator D3H41_RS13835 PF00113 Enolase, C-terminal TIM barrel domain D3H41_RS13835 PF03952 Enolase, N-terminal domain D3H41_RS13840 PF00117 Glutamine amidotransferase class-I D3H41_RS13840 PF06418 CTP synthase N-terminus D3H41_RS13845 PF03819 MazG nucleotide pyrophosphohydrolase domain D3H41_RS13850 PF02824 TGS domain D3H41_RS13850 PF04607 Region found in RelA / SpoT proteins D3H41_RS13850 PF13291 ACT domain D3H41_RS13860 PF01938 TRAM domain D3H41_RS13860 PF05958 tRNA (Uracil-5-)-methyltransferase D3H41_RS13870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS13870 PF00672 HAMP domain D3H41_RS13870 PF00512 His Kinase A (phospho-acceptor) domain D3H41_RS13870 PF00072 Response regulator receiver domain D3H41_RS13870 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D3H41_RS13870 PF01627 Hpt domain D3H41_RS13875 PF01648 4'-phosphopantetheinyl transferase superfamily D3H41_RS13880 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ D3H41_RS13885 PF11967 Recombination protein O N terminal D3H41_RS13885 PF02565 Recombination protein O C terminal D3H41_RS13890 PF07650 KH domain D3H41_RS13890 PF01926 50S ribosome-binding GTPase D3H41_RS13895 PF14622 Ribonuclease-III-like D3H41_RS13895 PF00035 Double-stranded RNA binding motif D3H41_RS13900 PF10502 Signal peptidase, peptidase S26 D3H41_RS13905 PF00679 Elongation factor G C-terminus D3H41_RS13905 PF03144 Elongation factor Tu domain 2 D3H41_RS13905 PF06421 GTP-binding protein LepA C-terminus D3H41_RS13905 PF00009 Elongation factor Tu GTP binding domain D3H41_RS13915 PF03888 MucB/RseB N-terminal domain D3H41_RS13915 PF17188 MucB/RseB C-terminal domain D3H41_RS13920 PF03873 Anti sigma-E protein RseA, C-terminal domain D3H41_RS13920 PF03872 Anti sigma-E protein RseA, N-terminal domain D3H41_RS13925 PF08281 Sigma-70, region 4 D3H41_RS13925 PF04542 Sigma-70 region 2 D3H41_RS13935 PF02910 Fumarate reductase flavoprotein C-term D3H41_RS13935 PF00890 FAD binding domain D3H41_RS13945 PF03937 Flavinator of succinate dehydrogenase D3H41_RS13965 PF01494 FAD binding domain D3H41_RS13970 PF01494 FAD binding domain D3H41_RS13975 PF03695 Uncharacterised protein family (UPF0149) D3H41_RS13985 PF05164 Cell division protein ZapA D3H41_RS13995 PF01812 5-formyltetrahydrofolate cyclo-ligase family D3H41_RS14000 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) D3H41_RS14005 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D3H41_RS14005 PF01842 ACT domain D3H41_RS14005 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D3H41_RS14010 PF04402 Protein of unknown function (DUF541) D3H41_RS14015 PF03466 LysR substrate binding domain D3H41_RS14015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS14020 PF01810 LysE type translocator D3H41_RS14030 PF05552 Conserved TM helix D3H41_RS14030 PF00924 Mechanosensitive ion channel D3H41_RS14035 PF01116 Fructose-bisphosphate aldolase class-II D3H41_RS14040 PF00162 Phosphoglycerate kinase D3H41_RS14045 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D3H41_RS14045 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D3H41_RS14050 PF07715 TonB-dependent Receptor Plug Domain D3H41_RS14050 PF00593 TonB dependent receptor D3H41_RS14055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS14055 PF03466 LysR substrate binding domain D3H41_RS14060 PF02780 Transketolase, C-terminal domain D3H41_RS14060 PF00456 Transketolase, thiamine diphosphate binding domain D3H41_RS14060 PF02779 Transketolase, pyrimidine binding domain D3H41_RS14070 PF02773 S-adenosylmethionine synthetase, C-terminal domain D3H41_RS14070 PF00438 S-adenosylmethionine synthetase, N-terminal domain D3H41_RS14070 PF02772 S-adenosylmethionine synthetase, central domain D3H41_RS14080 PF10263 SprT-like family D3H41_RS14080 PF17283 SprT-like zinc ribbon domain D3H41_RS14085 PF04231 Endonuclease I D3H41_RS14090 PF04452 RNA methyltransferase D3H41_RS14095 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain D3H41_RS14095 PF02951 Prokaryotic glutathione synthetase, N-terminal domain D3H41_RS14100 PF02622 Uncharacterized ACR, COG1678 D3H41_RS14105 PF03652 Holliday junction resolvase D3H41_RS14110 PF00437 Type II/IV secretion system protein D3H41_RS14115 PF00437 Type II/IV secretion system protein D3H41_RS14120 PF01168 Alanine racemase, N-terminal domain D3H41_RS14125 PF14748 Pyrroline-5-carboxylate reductase dimerisation D3H41_RS14125 PF03807 NADP oxidoreductase coenzyme F420-dependent D3H41_RS14130 PF02325 YGGT family D3H41_RS14135 PF02594 Uncharacterised ACR, YggU family COG1872 D3H41_RS14145 PF01725 Ham1 family D3H41_RS14150 PF04055 Radical SAM superfamily D3H41_RS14150 PF06969 HemN C-terminal domain D3H41_RS14155 PF04960 Glutaminase D3H41_RS14160 PF02086 D12 class N6 adenine-specific DNA methyltransferase D3H41_RS14165 PF02390 Putative methyltransferase D3H41_RS14170 PF00633 Helix-hairpin-helix motif D3H41_RS14170 PF00730 HhH-GPD superfamily base excision DNA repair protein D3H41_RS14170 PF14815 NUDIX domain D3H41_RS14175 PF04362 Bacterial Fe(2+) trafficking D3H41_RS14180 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain D3H41_RS14180 PF01464 Transglycosylase SLT domain D3H41_RS14220 PF00672 HAMP domain D3H41_RS14220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_RS14220 PF17200 Single Cache domain 2 D3H41_RS14250 PF00171 Aldehyde dehydrogenase family D3H41_RS14300 PF00356 Bacterial regulatory proteins, lacI family D3H41_RS14305 PF04794 YdjC-like protein D3H41_RS14310 PF11975 Family 4 glycosyl hydrolase C-terminal domain D3H41_RS14310 PF02056 Family 4 glycosyl hydrolase D3H41_RS14315 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit D3H41_RS14320 PF02378 Phosphotransferase system, EIIC D3H41_RS14325 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D3H41_RS14330 PF01522 Polysaccharide deacetylase D3H41_RS14345 PF10011 Predicted membrane protein (DUF2254) D3H41_RS14355 PF03739 Lipopolysaccharide export system permease LptF/LptG D3H41_RS14360 PF03739 Lipopolysaccharide export system permease LptF/LptG D3H41_RS14365 PF02789 Cytosol aminopeptidase family, N-terminal domain D3H41_RS14365 PF00883 Cytosol aminopeptidase family, catalytic domain D3H41_RS14370 PF04364 DNA polymerase III chi subunit, HolC D3H41_RS14375 PF08264 Anticodon-binding domain of tRNA D3H41_RS14375 PF00133 tRNA synthetases class I (I, L, M and V) D3H41_RS14375 PF10458 Valyl tRNA synthetase tRNA binding arm D3H41_RS14385 PF00583 Acetyltransferase (GNAT) family D3H41_RS14395 PF06877 Regulator of ribonuclease activity B D3H41_RS14405 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D3H41_RS14405 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D3H41_RS14415 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D3H41_RS14415 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D3H41_RS14420 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain D3H41_RS14420 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain D3H41_RS14425 PF01042 Endoribonuclease L-PSP D3H41_RS14430 PF01553 Acyltransferase D3H41_RS14435 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D3H41_RS14440 PF01722 BolA-like protein D3H41_RS14450 PF05494 MlaC protein D3H41_RS14455 PF02470 MlaD protein D3H41_RS14460 PF02405 Permease MlaE D3H41_RS14465 PF00005 ABC transporter D3H41_RS14470 PF01699 Sodium/calcium exchanger protein D3H41_RS14475 PF01380 SIS domain D3H41_RS14475 PF00571 CBS domain D3H41_RS14485 PF03968 OstA-like protein D3H41_RS14490 PF12399 Branched-chain amino acid ATP-binding cassette transporter D3H41_RS14490 PF00005 ABC transporter D3H41_RS14495 PF04552 Sigma-54, DNA binding domain D3H41_RS14495 PF04963 Sigma-54 factor, core binding domain D3H41_RS14495 PF00309 Sigma-54 factor, Activator interacting domain (AID) D3H41_RS14500 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein D3H41_RS14505 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D3H41_RS14510 PF03668 P-loop ATPase protein family D3H41_RS14515 PF00381 PTS HPr component phosphorylation site D3H41_RS14520 PF00571 CBS domain D3H41_RS14520 PF01769 Divalent cation transporter D3H41_RS14520 PF03448 MgtE intracellular N domain D3H41_RS14525 PF01523 Putative modulator of DNA gyrase D3H41_RS14530 PF04751 Protein of unknown function (DUF615) D3H41_RS14535 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D3H41_RS14535 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D3H41_RS14540 PF00849 RNA pseudouridylate synthase D3H41_RS14550 PF18339 RapA N-terminal Tudor like domain 1 D3H41_RS14550 PF00271 Helicase conserved C-terminal domain D3H41_RS14550 PF00176 SNF2 family N-terminal domain D3H41_RS14550 PF18337 RapA N-terminal Tudor like domain D3H41_RS14550 PF12137 RNA polymerase recycling family C-terminal D3H41_RS14555 PF02562 PhoH-like protein D3H41_RS14555 PF13638 PIN domain D3H41_RS14560 PF01523 Putative modulator of DNA gyrase D3H41_RS14565 PF00795 Carbon-nitrogen hydrolase D3H41_RS14570 PF13502 AsmA-like C-terminal region D3H41_RS14570 PF13116 Protein of unknown function D3H41_RS14575 PF10150 Ribonuclease E/G family D3H41_RS14575 PF00575 S1 RNA binding domain D3H41_RS14580 PF02545 Maf-like protein D3H41_RS14585 PF04093 rod shape-determining protein MreD D3H41_RS14590 PF04085 rod shape-determining protein MreC D3H41_RS14630 PF07963 Prokaryotic N-terminal methylation motif D3H41_RS14640 PF00482 Type II secretion system (T2SS), protein F D3H41_RS14645 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain D3H41_RS14645 PF00437 Type II/IV secretion system protein D3H41_RS14655 PF01471 Putative peptidoglycan binding domain D3H41_RS14655 PF13401 AAA domain D3H41_RS14660 PF03958 Bacterial type II/III secretion system short domain D3H41_RS14660 PF00263 Bacterial type II and III secretion system protein D3H41_RS14680 PF00990 Diguanylate cyclase, GGDEF domain D3H41_RS14680 PF17157 Gammaproteobacterial periplasmic sensor domain D3H41_RS14680 PF00563 EAL domain D3H41_RS14685 PF00436 Single-strand binding protein family D3H41_RS14690 PF00196 Bacterial regulatory proteins, luxR family D3H41_RS14695 PF00483 Nucleotidyl transferase D3H41_RS14700 PF00005 ABC transporter D3H41_RS14700 PF17755 UvrA DNA-binding domain D3H41_RS14700 PF17760 UvrA interaction domain D3H41_RS14710 PF00266 Aminotransferase class-V D3H41_RS14720 PF01842 ACT domain D3H41_RS14720 PF00696 Amino acid kinase family D3H41_RS14725 PF02310 B12 binding domain D3H41_RS14725 PF02607 B12 binding domain D3H41_RS14725 PF00809 Pterin binding enzyme D3H41_RS14725 PF02965 Vitamin B12 dependent methionine synthase, activation domain D3H41_RS14725 PF02574 Homocysteine S-methyltransferase D3H41_RS14730 PF00999 Sodium/hydrogen exchanger family D3H41_RS14790 PF01507 Phosphoadenosine phosphosulfate reductase family D3H41_RS14795 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D3H41_RS14795 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D3H41_RS14800 PF00175 Oxidoreductase NAD-binding domain D3H41_RS14800 PF00667 FAD binding domain D3H41_RS14800 PF00258 Flavodoxin D3H41_RS14820 PF01207 Dihydrouridine synthase (Dus) D3H41_RS14825 PF01475 Ferric uptake regulator family D3H41_RS14835 PF00342 Phosphoglucose isomerase D3H41_RS14840 PF01894 Uncharacterised protein family UPF0047 D3H41_RS14845 PF00842 Alanine racemase, C-terminal domain D3H41_RS14845 PF01168 Alanine racemase, N-terminal domain D3H41_RS14850 PF03796 DnaB-like helicase C terminal domain D3H41_RS14850 PF00772 DnaB-like helicase N terminal domain D3H41_RS14860 PF03948 Ribosomal protein L9, C-terminal domain D3H41_RS14860 PF01281 Ribosomal protein L9, N-terminal domain D3H41_RS14865 PF01084 Ribosomal protein S18 D3H41_RS14870 PF00436 Single-strand binding protein family D3H41_RS14875 PF01250 Ribosomal protein S6 D3H41_RS14880 PF00834 Ribulose-phosphate 3 epimerase family D3H41_RS14885 PF02086 D12 class N6 adenine-specific DNA methyltransferase D3H41_RS14895 PF01761 3-dehydroquinate synthase D3H41_RS14900 PF01202 Shikimate kinase D3H41_RS14905 PF03958 Bacterial type II/III secretion system short domain D3H41_RS14905 PF00263 Bacterial type II and III secretion system protein D3H41_RS14905 PF07660 Secretin and TonB N terminus short domain D3H41_RS14905 PF11741 AMIN domain D3H41_RS14910 PF04351 Pilus assembly protein, PilP D3H41_RS14920 PF05137 Fimbrial assembly protein (PilN) D3H41_RS14930 PF00912 Transglycosylase D3H41_RS14930 PF17092 Penicillin-binding protein OB-like domain D3H41_RS14930 PF00905 Penicillin binding protein transpeptidase domain D3H41_RS14935 PF03466 LysR substrate binding domain D3H41_RS14935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS14940 PF08534 Redoxin D3H41_RS14940 PF00462 Glutaredoxin D3H41_RS14945 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D3H41_RS14945 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3H41_RS14955 PF00206 Lyase D3H41_RS14955 PF14698 Argininosuccinate lyase C-terminal D3H41_RS14955 PF00583 Acetyltransferase (GNAT) family D3H41_RS14960 PF00764 Arginosuccinate synthase D3H41_RS14965 PF00696 Amino acid kinase family D3H41_RS14970 PF01118 Semialdehyde dehydrogenase, NAD binding domain D3H41_RS14970 PF02774 Semialdehyde dehydrogenase, dimerisation domain D3H41_RS14975 PF01546 Peptidase family M20/M25/M40 D3H41_RS14975 PF07687 Peptidase dimerisation domain D3H41_RS14980 PF00311 Phosphoenolpyruvate carboxylase D3H41_RS14990 PF02219 Methylenetetrahydrofolate reductase D3H41_RS14995 PF00742 Homoserine dehydrogenase D3H41_RS14995 PF00696 Amino acid kinase family D3H41_RS14995 PF03447 Homoserine dehydrogenase, NAD binding domain D3H41_RS15000 PF01053 Cys/Met metabolism PLP-dependent enzyme D3H41_RS15005 PF01340 Met Apo-repressor, MetJ D3H41_RS15010 PF00390 Malic enzyme, N-terminal domain D3H41_RS15010 PF03949 Malic enzyme, NAD binding domain D3H41_RS15015 PF00210 Ferritin-like domain D3H41_RS15020 PF04324 BFD-like [2Fe-2S] binding domain D3H41_RS15025 PF00009 Elongation factor Tu GTP binding domain D3H41_RS15025 PF03143 Elongation factor Tu C-terminal domain D3H41_RS15025 PF03144 Elongation factor Tu domain 2 D3H41_RS15030 PF00679 Elongation factor G C-terminus D3H41_RS15030 PF14492 Elongation Factor G, domain II D3H41_RS15030 PF03764 Elongation factor G, domain IV D3H41_RS15030 PF00009 Elongation factor Tu GTP binding domain D3H41_RS15030 PF03144 Elongation factor Tu domain 2 D3H41_RS15035 PF00177 Ribosomal protein S7p/S5e D3H41_RS15040 PF00164 Ribosomal protein S12/S23 D3H41_RS15045 PF04077 DsrH like protein D3H41_RS15050 PF02635 DsrE/DsrF-like family D3H41_RS15055 PF02635 DsrE/DsrF-like family D3H41_RS15060 PF13309 HTH domain D3H41_RS15060 PF08348 YheO-like PAS domain D3H41_RS15065 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D3H41_RS15065 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D3H41_RS15075 PF04102 SlyX D3H41_RS15080 PF01112 Asparaginase D3H41_RS15090 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D3H41_RS15100 PF00999 Sodium/hydrogen exchanger family D3H41_RS15100 PF02254 TrkA-N domain D3H41_RS15105 PF02525 Flavodoxin-like fold D3H41_RS15110 PF00005 ABC transporter D3H41_RS15110 PF12848 ABC transporter D3H41_RS15120 PF00561 alpha/beta hydrolase fold D3H41_RS15125 PF06794 Uncharacterised protein family (UPF0270) D3H41_RS15130 PF00485 Phosphoribulokinase / Uridine kinase family D3H41_RS15135 PF13545 Crp-like helix-turn-helix domain D3H41_RS15135 PF00027 Cyclic nucleotide-binding domain D3H41_RS15145 PF00171 Aldehyde dehydrogenase family D3H41_RS15150 PF04958 Arginine N-succinyltransferase beta subunit D3H41_RS15155 PF00202 Aminotransferase class-III D3H41_RS15160 PF00117 Glutamine amidotransferase class-I D3H41_RS15175 PF00579 tRNA synthetases class I (W and Y) D3H41_RS15180 PF13419 Haloacid dehalogenase-like hydrolase D3H41_RS15185 PF08032 RNA 2'-O ribose methyltransferase substrate binding D3H41_RS15185 PF00588 SpoU rRNA Methylase family D3H41_RS15190 PF08461 Ribonuclease R winged-helix domain D3H41_RS15190 PF17876 Cold shock domain D3H41_RS15190 PF08206 Ribonuclease B OB domain D3H41_RS15190 PF00575 S1 RNA binding domain D3H41_RS15190 PF00773 RNB domain D3H41_RS15195 PF02082 Transcriptional regulator D3H41_RS15200 PF00042 Globin D3H41_RS15200 PF00970 Oxidoreductase FAD-binding domain D3H41_RS15200 PF00175 Oxidoreductase NAD-binding domain D3H41_RS15205 PF08238 Sel1 repeat D3H41_RS15215 PF00709 Adenylosuccinate synthetase D3H41_RS15220 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) D3H41_RS15225 PF01145 SPFH domain / Band 7 family D3H41_RS15230 PF01145 SPFH domain / Band 7 family D3H41_RS15230 PF12221 Bacterial membrane protein N terminal D3H41_RS15235 PF13167 GTP-binding GTPase N-terminal D3H41_RS15235 PF01926 50S ribosome-binding GTPase D3H41_RS15235 PF16360 GTP-binding GTPase Middle Region D3H41_RS15240 PF17209 Hfq protein D3H41_RS15250 PF08676 MutL C terminal dimerisation domain D3H41_RS15250 PF01119 DNA mismatch repair protein, C-terminal domain D3H41_RS15255 PF01520 N-acetylmuramoyl-L-alanine amidase D3H41_RS15260 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE D3H41_RS15270 PF08331 Domain of unknown function (DUF1730) D3H41_RS15335 PF00929 Exonuclease D3H41_RS15340 PF03193 RsgA GTPase D3H41_RS15345 PF02666 Phosphatidylserine decarboxylase D3H41_RS15350 PF02080 TrkA-C domain D3H41_RS15350 PF03600 Citrate transporter D3H41_RS15360 PF06415 BPG-independent PGAM N-terminus (iPGM_N) D3H41_RS15360 PF01676 Metalloenzyme superfamily D3H41_RS15365 PF00581 Rhodanese-like domain D3H41_RS15370 PF02556 Preprotein translocase subunit SecB D3H41_RS15375 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus D3H41_RS15375 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus D3H41_RS15380 PF00132 Bacterial transferase hexapeptide (six repeats) D3H41_RS15380 PF06426 Serine acetyltransferase, N-terminal D3H41_RS15385 PF01551 Peptidase family M23 D3H41_RS15395 PF08360 QacR-like protein, C-terminal region D3H41_RS15395 PF00440 Bacterial regulatory proteins, tetR family D3H41_RS15405 PF00152 tRNA synthetases class II (D, K and N) D3H41_RS15410 PF02910 Fumarate reductase flavoprotein C-term D3H41_RS15410 PF00890 FAD binding domain D3H41_RS15415 PF13183 4Fe-4S dicluster domain D3H41_RS15415 PF13085 2Fe-2S iron-sulfur cluster binding domain D3H41_RS15420 PF02300 Fumarate reductase subunit C D3H41_RS15425 PF02313 Fumarate reductase subunit D D3H41_RS15435 PF09285 Elongation factor P, C-terminal D3H41_RS15435 PF01132 Elongation factor P (EF-P) OB domain D3H41_RS15435 PF08207 Elongation factor P (EF-P) KOW-like domain D3H41_RS15440 PF04055 Radical SAM superfamily D3H41_RS15445 PF02308 MgtC family D3H41_RS15455 PF00118 TCP-1/cpn60 chaperonin family D3H41_RS15460 PF00166 Chaperonin 10 Kd subunit D3H41_RS15465 PF01554 MatE D3H41_RS15470 PF00365 Phosphofructokinase D3H41_RS15475 PF01545 Cation efflux family D3H41_RS15475 PF16916 Dimerisation domain of Zinc Transporter D3H41_RS15480 PF07813 LTXXQ motif family protein D3H41_RS15485 PF00072 Response regulator receiver domain D3H41_RS15485 PF00486 Transcriptional regulatory protein, C terminal D3H41_RS15490 PF00512 His Kinase A (phospho-acceptor) domain D3H41_RS15490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS15490 PF16527 Two-component sensor protein CpxA, periplasmic domain D3H41_RS15490 PF00672 HAMP domain D3H41_RS15495 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D3H41_RS15495 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D3H41_RS15500 PF00588 SpoU rRNA Methylase family D3H41_RS15505 PF04186 FxsA cytoplasmic membrane protein D3H41_RS15510 PF10415 Fumarase C C-terminus D3H41_RS15510 PF00206 Lyase D3H41_RS15515 PF03605 Anaerobic c4-dicarboxylate membrane transporter D3H41_RS15520 PF02683 Cytochrome C biogenesis protein transmembrane region D3H41_RS15520 PF11412 Disulphide bond corrector protein DsbC D3H41_RS15525 PF00196 Bacterial regulatory proteins, luxR family D3H41_RS15525 PF00072 Response regulator receiver domain D3H41_RS15530 PF02080 TrkA-C domain D3H41_RS15530 PF00999 Sodium/hydrogen exchanger family D3H41_RS15530 PF03471 Transporter associated domain D3H41_RS15540 PF00474 Sodium:solute symporter family D3H41_RS15555 PF10415 Fumarase C C-terminus D3H41_RS15555 PF00206 Lyase D3H41_RS15560 PF01627 Hpt domain D3H41_RS15560 PF00512 His Kinase A (phospho-acceptor) domain D3H41_RS15560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS15560 PF00072 Response regulator receiver domain D3H41_RS15560 PF00672 HAMP domain D3H41_RS15565 PF12832 MFS_1 like family D3H41_RS15580 PF16177 Acetyl-coenzyme A synthetase N-terminus D3H41_RS15580 PF00501 AMP-binding enzyme D3H41_RS15580 PF13193 AMP-binding enzyme C-terminal domain D3H41_RS15585 PF01220 Dehydroquinase class II D3H41_RS15590 PF00364 Biotin-requiring enzyme D3H41_RS15595 PF00289 Biotin carboxylase, N-terminal domain D3H41_RS15595 PF02785 Biotin carboxylase C-terminal domain D3H41_RS15595 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D3H41_RS15610 PF01207 Dihydrouridine synthase (Dus) D3H41_RS15615 PF02954 Bacterial regulatory protein, Fis family D3H41_RS15625 PF00005 ABC transporter D3H41_RS15625 PF12848 ABC transporter D3H41_RS15690 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain D3H41_RS15690 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain D3H41_RS15690 PF01276 Orn/Lys/Arg decarboxylase, major domain D3H41_RS15695 PF13520 Amino acid permease D3H41_RS15705 PF00486 Transcriptional regulatory protein, C terminal D3H41_RS15705 PF18500 CadC C-terminal domain 1 D3H41_RS15720 PF00466 Ribosomal protein L10 D3H41_RS15725 PF00542 Ribosomal protein L7/L12 C-terminal domain D3H41_RS15725 PF16320 Ribosomal protein L7/L12 dimerisation domain D3H41_RS15745 PF09297 NADH pyrophosphatase zinc ribbon domain D3H41_RS15745 PF00293 NUDIX domain D3H41_RS15750 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ D3H41_RS15760 PF00623 RNA polymerase Rpb1, domain 2 D3H41_RS15760 PF05000 RNA polymerase Rpb1, domain 4 D3H41_RS15760 PF04997 RNA polymerase Rpb1, domain 1 D3H41_RS15760 PF04998 RNA polymerase Rpb1, domain 5 D3H41_RS15760 PF04983 RNA polymerase Rpb1, domain 3 D3H41_RS15765 PF04563 RNA polymerase beta subunit D3H41_RS15765 PF04561 RNA polymerase Rpb2, domain 2 D3H41_RS15765 PF04565 RNA polymerase Rpb2, domain 3 D3H41_RS15765 PF00562 RNA polymerase Rpb2, domain 6 D3H41_RS15765 PF10385 RNA polymerase beta subunit external 1 domain D3H41_RS15765 PF04560 RNA polymerase Rpb2, domain 7 D3H41_RS15770 PF00542 Ribosomal protein L7/L12 C-terminal domain D3H41_RS15770 PF16320 Ribosomal protein L7/L12 dimerisation domain D3H41_RS15775 PF00466 Ribosomal protein L10 D3H41_RS15780 PF00687 Ribosomal protein L1p/L10e family D3H41_RS15785 PF00298 Ribosomal protein L11, RNA binding domain D3H41_RS15785 PF03946 Ribosomal protein L11, N-terminal domain D3H41_RS15790 PF00467 KOW motif D3H41_RS15790 PF02357 Transcription termination factor nusG D3H41_RS15795 PF00584 SecE/Sec61-gamma subunits of protein translocation complex D3H41_RS15805 PF03144 Elongation factor Tu domain 2 D3H41_RS15805 PF03143 Elongation factor Tu C-terminal domain D3H41_RS15805 PF00009 Elongation factor Tu GTP binding domain D3H41_RS15835 PF00485 Phosphoribulokinase / Uridine kinase family D3H41_RS15840 PF08279 HTH domain D3H41_RS15840 PF02237 Biotin protein ligase C terminal domain D3H41_RS15840 PF03099 Biotin/lipoate A/B protein ligase family D3H41_RS15845 PF01565 FAD binding domain D3H41_RS15845 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain D3H41_RS15855 PF13091 PLD-like domain D3H41_RS15910 PF01177 Asp/Glu/Hydantoin racemase D3H41_RS15920 PF07715 TonB-dependent Receptor Plug Domain D3H41_RS15920 PF00593 TonB dependent receptor D3H41_RS15925 PF05958 tRNA (Uracil-5-)-methyltransferase D3H41_RS15935 PF00440 Bacterial regulatory proteins, tetR family D3H41_RS15940 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D3H41_RS15940 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3H41_RS15945 PF01554 MatE D3H41_RS15950 PF04072 Leucine carboxyl methyltransferase D3H41_RS15960 PF01726 LexA DNA binding domain D3H41_RS15960 PF00717 Peptidase S24-like D3H41_RS15970 PF01553 Acyltransferase D3H41_RS15975 PF01040 UbiA prenyltransferase family D3H41_RS15980 PF04345 Chorismate lyase D3H41_RS15985 PF03748 Flagellar basal body-associated protein FliL D3H41_RS15990 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease D3H41_RS15990 PF01694 Rhomboid family D3H41_RS15995 PF00581 Rhodanese-like domain D3H41_RS16005 PF00140 Sigma-70 factor, region 1.2 D3H41_RS16005 PF04542 Sigma-70 region 2 D3H41_RS16005 PF04545 Sigma-70, region 4 D3H41_RS16010 PF18075 FtsX extracellular domain D3H41_RS16015 PF00005 ABC transporter D3H41_RS16020 PF02881 SRP54-type protein, helical bundle domain D3H41_RS16020 PF00448 SRP54-type protein, GTPase domain D3H41_RS16035 PF01914 MarC family integral membrane protein D3H41_RS16060 PF10694 Protein of unknown function (DUF2500) D3H41_RS16080 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D3H41_RS16080 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D3H41_RS16085 PF01022 Bacterial regulatory protein, arsR family D3H41_RS16090 PF08668 HDOD domain D3H41_RS16090 PF00563 EAL domain D3H41_RS16095 PF01810 LysE type translocator D3H41_RS16100 PF12146 Serine aminopeptidase, S33 D3H41_RS16120 PF03942 DTW domain D3H41_RS16125 PF08495 FIST N domain D3H41_RS16125 PF00990 Diguanylate cyclase, GGDEF domain D3H41_RS16125 PF00563 EAL domain D3H41_RS16125 PF10442 FIST C domain D3H41_RS16130 PF13419 Haloacid dehalogenase-like hydrolase D3H41_RS16135 PF00589 Phage integrase family D3H41_RS16135 PF02899 Phage integrase, N-terminal SAM-like domain D3H41_RS16145 PF01678 Diaminopimelate epimerase D3H41_RS16150 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D3H41_RS16150 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D3H41_RS16160 PF01491 Frataxin-like domain D3H41_RS16165 PF01295 Adenylate cyclase, class-I D3H41_RS16165 PF12633 Adenylate cyclase NT domain D3H41_RS16170 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain D3H41_RS16170 PF03900 Porphobilinogen deaminase, C-terminal domain D3H41_RS16175 PF02602 Uroporphyrinogen-III synthase HemD D3H41_RS16180 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase D3H41_RS16185 PF07219 HemY protein N-terminus D3H41_RS16225 PF00175 Oxidoreductase NAD-binding domain D3H41_RS16230 PF00111 2Fe-2S iron-sulfur cluster binding domain D3H41_RS16235 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase D3H41_RS16245 PF07497 Rho termination factor, RNA-binding domain D3H41_RS16245 PF07498 Rho termination factor, N-terminal domain D3H41_RS16245 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D3H41_RS16250 PF00085 Thioredoxin D3H41_RS16255 PF00270 DEAD/DEAH box helicase D3H41_RS16255 PF00271 Helicase conserved C-terminal domain D3H41_RS16260 PF02541 Ppx/GppA phosphatase family D3H41_RS16270 PF02592 Putative vitamin uptake transporter D3H41_RS16285 PF09382 RQC domain D3H41_RS16285 PF00570 HRDC domain D3H41_RS16285 PF16124 RecQ zinc-binding D3H41_RS16285 PF00271 Helicase conserved C-terminal domain D3H41_RS16285 PF00270 DEAD/DEAH box helicase D3H41_RS16290 PF00892 EamA-like transporter family D3H41_RS16300 PF01810 LysE type translocator D3H41_RS16315 PF13361 UvrD-like helicase C-terminal domain D3H41_RS16315 PF00580 UvrD/REP helicase N-terminal domain D3H41_RS16325 PF05114 Protein of unknown function (DUF692) D3H41_RS16345 PF07690 Major Facilitator Superfamily D3H41_RS16350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS16350 PF03466 LysR substrate binding domain D3H41_RS16355 PF00557 Metallopeptidase family M24 D3H41_RS16355 PF00557 Metallopeptidase family M24 D3H41_RS16355 PF01321 Creatinase/Prolidase N-terminal domain D3H41_RS16355 PF01321 Creatinase/Prolidase N-terminal domain D3H41_RS16360 PF04055 Radical SAM superfamily D3H41_RS16360 PF06968 Biotin and Thiamin Synthesis associated domain D3H41_RS16365 PF05690 Thiazole biosynthesis protein ThiG D3H41_RS16370 PF02597 ThiS family D3H41_RS16375 PF00899 ThiF family D3H41_RS16380 PF02581 Thiamine monophosphate synthase D3H41_RS16385 PF13667 ThiC-associated domain D3H41_RS16385 PF01964 Radical SAM ThiC family D3H41_RS16390 PF02537 CrcB-like protein, Camphor Resistance (CrcB) D3H41_RS16395 PF00394 Multicopper oxidase D3H41_RS16395 PF07731 Multicopper oxidase D3H41_RS16395 PF07732 Multicopper oxidase D3H41_RS16440 PF00132 Bacterial transferase hexapeptide (six repeats) D3H41_RS16445 PF07369 Protein of unknown function (DUF1488) D3H41_RS16450 PF01488 Shikimate / quinate 5-dehydrogenase D3H41_RS16450 PF18317 Shikimate 5'-dehydrogenase C-terminal domain D3H41_RS16450 PF08501 Shikimate dehydrogenase substrate binding domain D3H41_RS16455 PF01218 Coproporphyrinogen III oxidase D3H41_RS16460 PF01300 Telomere recombination D3H41_RS16465 PF00731 AIR carboxylase D3H41_RS16470 PF02222 ATP-grasp domain D3H41_RS16470 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain D3H41_RS16475 PF01797 Transposase IS200 like D3H41_RS16480 PF01396 Topoisomerase DNA binding C4 zinc finger D3H41_RS16490 PF04361 Protein of unknown function (DUF494) D3H41_RS16495 PF17782 DprA winged helix domain D3H41_RS16495 PF02481 DNA recombination-mediator protein A D3H41_RS16505 PF01327 Polypeptide deformylase D3H41_RS16510 PF00551 Formyl transferase D3H41_RS16510 PF02911 Formyl transferase, C-terminal domain D3H41_RS16515 PF01189 16S rRNA methyltransferase RsmB/F D3H41_RS16515 PF01029 NusB family D3H41_RS16520 PF02254 TrkA-N domain D3H41_RS16520 PF02080 TrkA-C domain D3H41_RS16525 PF02386 Cation transport protein D3H41_RS16535 PF03006 Haemolysin-III related D3H41_RS16540 PF07070 SpoOM protein D3H41_RS16550 PF06288 Protein of unknown function (DUF1040) D3H41_RS16555 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase D3H41_RS16555 PF13746 4Fe-4S dicluster domain D3H41_RS16555 PF12801 4Fe-4S binding domain D3H41_RS16560 PF01636 Phosphotransferase enzyme family D3H41_RS16565 PF01323 DSBA-like thioredoxin domain D3H41_RS16570 PF01553 Acyltransferase D3H41_RS16580 PF13335 Magnesium chelatase, subunit ChlI C-terminal D3H41_RS16580 PF01078 Magnesium chelatase, subunit ChlI D3H41_RS16585 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D3H41_RS16585 PF00205 Thiamine pyrophosphate enzyme, central domain D3H41_RS16585 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D3H41_RS16595 PF01063 Amino-transferase class IV D3H41_RS16600 PF00920 Dehydratase family D3H41_RS16605 PF00291 Pyridoxal-phosphate dependent enzyme D3H41_RS16605 PF00585 C-terminal regulatory domain of Threonine dehydratase D3H41_RS16610 PF03466 LysR substrate binding domain D3H41_RS16610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS16615 PF07690 Major Facilitator Superfamily D3H41_RS16620 PF00497 Bacterial extracellular solute-binding proteins, family 3 D3H41_RS16625 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS16630 PF12804 MobA-like NTP transferase domain D3H41_RS16630 PF00132 Bacterial transferase hexapeptide (six repeats) D3H41_RS16635 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain D3H41_RS16635 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain D3H41_RS16640 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D3H41_RS16640 PF02874 ATP synthase alpha/beta family, beta-barrel domain D3H41_RS16645 PF00231 ATP synthase D3H41_RS16650 PF00306 ATP synthase alpha/beta chain, C terminal domain D3H41_RS16650 PF02874 ATP synthase alpha/beta family, beta-barrel domain D3H41_RS16650 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D3H41_RS16655 PF00213 ATP synthase delta (OSCP) subunit D3H41_RS16660 PF00430 ATP synthase B/B' CF(0) D3H41_RS16665 PF00137 ATP synthase subunit C D3H41_RS16670 PF00119 ATP synthase A chain D3H41_RS16675 PF03899 ATP synthase I chain D3H41_RS16680 PF17762 HTH domain found in ParB protein D3H41_RS16680 PF02195 ParB-like nuclease domain D3H41_RS16685 PF13614 AAA domain D3H41_RS16690 PF02527 rRNA small subunit methyltransferase G D3H41_RS16695 PF01134 Glucose inhibited division protein A D3H41_RS16695 PF13932 GidA associated domain D3H41_RS16700 PF00258 Flavodoxin D3H41_RS16715 PF01381 Helix-turn-helix D3H41_RS16750 PF02384 N-6 DNA Methylase D3H41_RS16755 PF12008 Type I restriction and modification enzyme - subunit R C terminal D3H41_RS16755 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) D3H41_RS16755 PF18766 SWI2/SNF2 ATPase D3H41_RS16785 PF00589 Phage integrase family D3H41_RS16785 PF02899 Phage integrase, N-terminal SAM-like domain D3H41_RS16790 PF01926 50S ribosome-binding GTPase D3H41_RS16790 PF12631 MnmE helical domain D3H41_RS16790 PF10396 GTP-binding protein TrmE N-terminus D3H41_RS16795 PF02096 60Kd inner membrane protein D3H41_RS16795 PF14849 YidC periplasmic domain D3H41_RS16800 PF01809 Putative membrane protein insertion efficiency factor D3H41_RS16805 PF00825 Ribonuclease P D3H41_RS16810 PF00468 Ribosomal protein L34 D3H41_RS16815 PF00005 ABC transporter D3H41_RS16820 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS16825 PF00497 Bacterial extracellular solute-binding proteins, family 3 D3H41_RS16840 PF01925 Sulfite exporter TauE/SafE D3H41_RS16850 PF00270 DEAD/DEAH box helicase D3H41_RS16850 PF00271 Helicase conserved C-terminal domain D3H41_RS16855 PF09905 DNA-binding protein VF530 D3H41_RS16865 PF00291 Pyridoxal-phosphate dependent enzyme D3H41_RS16875 PF00313 'Cold-shock' DNA-binding domain D3H41_RS16885 PF01470 Pyroglutamyl peptidase D3H41_RS16895 PF02492 CobW/HypB/UreG, nucleotide-binding domain D3H41_RS16895 PF07683 Cobalamin synthesis protein cobW C-terminal domain D3H41_RS16900 PF00270 DEAD/DEAH box helicase D3H41_RS16900 PF00271 Helicase conserved C-terminal domain D3H41_RS16920 PF12792 CSS motif domain associated with EAL D3H41_RS16920 PF00563 EAL domain D3H41_RS16925 PF00005 ABC transporter D3H41_RS16930 PF12729 Four helix bundle sensory module for signal transduction D3H41_RS16930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_RS16930 PF00672 HAMP domain D3H41_RS16940 PF01575 MaoC like domain D3H41_RS16950 PF12849 PBP superfamily domain D3H41_RS16960 PF12833 Helix-turn-helix domain D3H41_RS16965 PF00773 RNB domain D3H41_RS16965 PF08206 Ribonuclease B OB domain D3H41_RS16965 PF00575 S1 RNA binding domain D3H41_RS16970 PF00270 DEAD/DEAH box helicase D3H41_RS16970 PF00271 Helicase conserved C-terminal domain D3H41_RS16970 PF03880 DbpA RNA binding domain D3H41_RS16980 PF03707 Bacterial signalling protein N terminal repeat D3H41_RS16980 PF00563 EAL domain D3H41_RS16980 PF00990 Diguanylate cyclase, GGDEF domain D3H41_RS16990 PF00871 Acetokinase family D3H41_RS16995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS16995 PF03466 LysR substrate binding domain D3H41_RS17000 PF12146 Serine aminopeptidase, S33 D3H41_RS17005 PF12146 Serine aminopeptidase, S33 D3H41_RS17020 PF00155 Aminotransferase class I and II D3H41_RS17025 PF01037 Lrp/AsnC ligand binding domain D3H41_RS17030 PF08240 Alcohol dehydrogenase GroES-like domain D3H41_RS17030 PF00107 Zinc-binding dehydrogenase D3H41_RS17035 PF14748 Pyrroline-5-carboxylate reductase dimerisation D3H41_RS17035 PF03807 NADP oxidoreductase coenzyme F420-dependent D3H41_RS17040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_RS17040 PF08447 PAS fold D3H41_RS17040 PF13426 PAS domain D3H41_RS17045 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS17050 PF00005 ABC transporter D3H41_RS17050 PF00571 CBS domain D3H41_RS17055 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS17060 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D3H41_RS17065 PF00795 Carbon-nitrogen hydrolase D3H41_RS17075 PF12833 Helix-turn-helix domain D3H41_RS17075 PF01965 DJ-1/PfpI family D3H41_RS17080 PF00561 alpha/beta hydrolase fold D3H41_RS17085 PF04909 Amidohydrolase D3H41_RS17090 PF13183 4Fe-4S dicluster domain D3H41_RS17090 PF01565 FAD binding domain D3H41_RS17090 PF02913 FAD linked oxidases, C-terminal domain D3H41_RS17100 PF00682 HMGL-like D3H41_RS17105 PF00378 Enoyl-CoA hydratase/isomerase D3H41_RS17110 PF01039 Carboxyl transferase domain D3H41_RS17115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D3H41_RS17115 PF02770 Acyl-CoA dehydrogenase, middle domain D3H41_RS17115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D3H41_RS17120 PF00376 MerR family regulatory protein D3H41_RS17120 PF09278 MerR, DNA binding D3H41_RS17125 PF02803 Thiolase, C-terminal domain D3H41_RS17125 PF00108 Thiolase, N-terminal domain D3H41_RS17130 PF00171 Aldehyde dehydrogenase family D3H41_RS17135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D3H41_RS17135 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D3H41_RS17135 PF02770 Acyl-CoA dehydrogenase, middle domain D3H41_RS17140 PF00378 Enoyl-CoA hydratase/isomerase D3H41_RS17145 PF00378 Enoyl-CoA hydratase/isomerase D3H41_RS17150 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D3H41_RS17150 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D3H41_RS17160 PF06481 COX Aromatic Rich Motif D3H41_RS17160 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D3H41_RS17165 PF00115 Cytochrome C and Quinol oxidase polypeptide I D3H41_RS17170 PF00510 Cytochrome c oxidase subunit III D3H41_RS17180 PF01040 UbiA prenyltransferase family D3H41_RS17185 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D3H41_RS17185 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3H41_RS17200 PF00171 Aldehyde dehydrogenase family D3H41_RS17210 PF02028 BCCT, betaine/carnitine/choline family transporter D3H41_RS17240 PF00005 ABC transporter D3H41_RS17245 PF00497 Bacterial extracellular solute-binding proteins, family 3 D3H41_RS17250 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS17255 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS17265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS17265 PF03466 LysR substrate binding domain D3H41_RS17280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS17280 PF03466 LysR substrate binding domain D3H41_RS17290 PF00766 Electron transfer flavoprotein FAD-binding domain D3H41_RS17290 PF01012 Electron transfer flavoprotein domain D3H41_RS17295 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D3H41_RS17295 PF00364 Biotin-requiring enzyme D3H41_RS17295 PF02817 e3 binding domain D3H41_RS17300 PF02779 Transketolase, pyrimidine binding domain D3H41_RS17300 PF02780 Transketolase, C-terminal domain D3H41_RS17305 PF00676 Dehydrogenase E1 component D3H41_RS17325 PF00474 Sodium:solute symporter family D3H41_RS17330 PF00929 Exonuclease D3H41_RS17330 PF07733 Bacterial DNA polymerase III alpha NTPase domain D3H41_RS17330 PF11490 DNA polymerase III polC-type N-terminus II D3H41_RS17330 PF02811 PHP domain D3H41_RS17330 PF14579 Helix-hairpin-helix motif D3H41_RS17330 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D3H41_RS17335 PF00571 CBS domain D3H41_RS17340 PF00392 Bacterial regulatory proteins, gntR family D3H41_RS17340 PF07729 FCD domain D3H41_RS17345 PF07729 FCD domain D3H41_RS17345 PF00392 Bacterial regulatory proteins, gntR family D3H41_RS17355 PF08787 Alginate lyase D3H41_RS17370 PF08787 Alginate lyase D3H41_RS17375 PF08787 Alginate lyase D3H41_RS17380 PF07940 Heparinase II/III-like protein D3H41_RS17380 PF05426 Alginate lyase D3H41_RS17385 PF07940 Heparinase II/III-like protein D3H41_RS17385 PF05426 Alginate lyase D3H41_RS17390 PF07883 Cupin domain D3H41_RS17395 PF00294 pfkB family carbohydrate kinase D3H41_RS17400 PF01081 KDPG and KHG aldolase D3H41_RS17410 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain D3H41_RS17410 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D3H41_RS17420 PF04314 Copper chaperone PCu(A)C D3H41_RS17455 PF00072 Response regulator receiver domain D3H41_RS17455 PF00486 Transcriptional regulatory protein, C terminal D3H41_RS17475 PF01483 Proprotein convertase P-domain D3H41_RS17475 PF00082 Subtilase family D3H41_RS17485 PF00990 Diguanylate cyclase, GGDEF domain D3H41_RS17495 PF03222 Tryptophan/tyrosine permease family D3H41_RS17505 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D3H41_RS17505 PF00384 Molybdopterin oxidoreductase D3H41_RS17505 PF01568 Molydopterin dinucleotide binding domain D3H41_RS17510 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D3H41_RS17510 PF14824 Sirohaem biosynthesis protein central D3H41_RS17510 PF10414 Sirohaem synthase dimerisation region D3H41_RS17515 PF02885 Glycosyl transferase family, helical bundle domain D3H41_RS17515 PF00591 Glycosyl transferase family, a/b domain D3H41_RS17520 PF01738 Dienelactone hydrolase family D3H41_RS17525 PF08376 Nitrate and nitrite sensing D3H41_RS17525 PF03861 ANTAR domain D3H41_RS17535 PF00005 ABC transporter D3H41_RS17540 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS17545 PF00005 ABC transporter D3H41_RS17550 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D3H41_RS17550 PF13806 Rieske-like [2Fe-2S] domain D3H41_RS17550 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3H41_RS17550 PF04324 BFD-like [2Fe-2S] binding domain D3H41_RS17550 PF18267 Rubredoxin NAD+ reductase C-terminal domain D3H41_RS17550 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D3H41_RS17580 PF00072 Response regulator receiver domain D3H41_RS17580 PF00211 Adenylate and Guanylate cyclase catalytic domain D3H41_RS17600 PF00069 Protein kinase domain D3H41_RS17600 PF03793 PASTA domain D3H41_RS17615 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE D3H41_RS17620 PF00691 OmpA family D3H41_RS17620 PF13677 Membrane MotB of proton-channel complex MotA/MotB D3H41_RS17625 PF06761 Intracellular multiplication and human macrophage-killing D3H41_RS17625 PF14331 ImcF-related N-terminal domain D3H41_RS17625 PF06744 Type VI secretion protein IcmF C-terminal D3H41_RS17645 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 D3H41_RS17650 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath D3H41_RS17655 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath D3H41_RS17670 PF05947 Type VI secretion system, TssF D3H41_RS17680 PF07724 AAA domain (Cdc48 subfamily) D3H41_RS17680 PF17871 AAA lid domain D3H41_RS17680 PF00004 ATPase family associated with various cellular activities (AAA) D3H41_RS17680 PF10431 C-terminal, D2-small domain, of ClpB protein D3H41_RS17690 PF06715 Gp5 C-terminal repeat (3 copies) D3H41_RS17690 PF04717 Type VI secretion system, phage-baseplate injector D3H41_RS17705 PF12320 Type 5 capsule protein repressor C-terminal domain D3H41_RS17705 PF00149 Calcineurin-like phosphoesterase D3H41_RS17710 PF13476 AAA domain D3H41_RS17720 PF08212 Lipocalin-like domain D3H41_RS17730 PF03606 C4-dicarboxylate anaerobic carrier D3H41_RS17740 PF01212 Beta-eliminating lyase D3H41_RS17750 PF07728 AAA domain (dynein-related subfamily) D3H41_RS17750 PF12592 Protein of unknown function (DUF3763) D3H41_RS17750 PF17868 AAA lid domain D3H41_RS17755 PF05762 VWA domain containing CoxE-like protein D3H41_RS17770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS17770 PF03466 LysR substrate binding domain D3H41_RS17775 PF09330 D-lactate dehydrogenase, membrane binding D3H41_RS17775 PF01565 FAD binding domain D3H41_RS17790 PF00842 Alanine racemase, C-terminal domain D3H41_RS17790 PF01168 Alanine racemase, N-terminal domain D3H41_RS17795 PF00672 HAMP domain D3H41_RS17795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_RS17810 PF00128 Alpha amylase, catalytic domain D3H41_RS17810 PF09154 Domain of unknown function (DUF1939) D3H41_RS17870 PF00563 EAL domain D3H41_RS17870 PF13426 PAS domain D3H41_RS17870 PF00990 Diguanylate cyclase, GGDEF domain D3H41_RS17880 PF01272 Transcription elongation factor, GreA/GreB, C-term D3H41_RS17880 PF14760 Rnk N-terminus D3H41_RS17885 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3H41_RS17885 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D3H41_RS17885 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D3H41_RS17885 PF04324 BFD-like [2Fe-2S] binding domain D3H41_RS17885 PF18267 Rubredoxin NAD+ reductase C-terminal domain D3H41_RS17890 PF13806 Rieske-like [2Fe-2S] domain D3H41_RS17895 PF01226 Formate/nitrite transporter D3H41_RS17900 PF14824 Sirohaem biosynthesis protein central D3H41_RS17900 PF10414 Sirohaem synthase dimerisation region D3H41_RS17900 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D3H41_RS17915 PF03605 Anaerobic c4-dicarboxylate membrane transporter D3H41_RS17930 PF07715 TonB-dependent Receptor Plug Domain D3H41_RS17930 PF00593 TonB dependent receptor D3H41_RS17940 PF13302 Acetyltransferase (GNAT) domain D3H41_RS17945 PF11756 Nitrous oxide-stimulated promoter D3H41_RS17950 PF07690 Major Facilitator Superfamily D3H41_RS17955 PF00085 Thioredoxin D3H41_RS17960 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D3H41_RS17960 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D3H41_RS17980 PF01238 Phosphomannose isomerase type I D3H41_RS17985 PF07690 Major Facilitator Superfamily D3H41_RS17990 PF05231 MASE1 D3H41_RS17990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS17990 PF07730 Histidine kinase D3H41_RS17995 PF00196 Bacterial regulatory proteins, luxR family D3H41_RS17995 PF00072 Response regulator receiver domain D3H41_RS18000 PF07690 Major Facilitator Superfamily D3H41_RS18005 PF02634 FdhD/NarQ family D3H41_RS18010 PF03466 LysR substrate binding domain D3H41_RS18010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS18020 PF00384 Molybdopterin oxidoreductase D3H41_RS18035 PF02567 Phenazine biosynthesis-like protein D3H41_RS18040 PF01177 Asp/Glu/Hydantoin racemase D3H41_RS18045 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3H41_RS18045 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D3H41_RS18055 PF04143 Sulphur transport D3H41_RS18070 PF03477 ATP cone domain D3H41_RS18070 PF13597 Anaerobic ribonucleoside-triphosphate reductase D3H41_RS18080 PF01554 MatE D3H41_RS18085 PF12833 Helix-turn-helix domain D3H41_RS18085 PF12852 Cupin D3H41_RS18090 PF00155 Aminotransferase class I and II D3H41_RS18095 PF18030 RimK PreATP-grasp domain D3H41_RS18095 PF08443 RimK-like ATP-grasp domain D3H41_RS18105 PF04076 Bacterial OB fold (BOF) protein D3H41_RS18110 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D3H41_RS18110 PF07685 CobB/CobQ-like glutamine amidotransferase domain D3H41_RS18120 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS18125 PF03459 TOBE domain D3H41_RS18125 PF00005 ABC transporter D3H41_RS18135 PF01590 GAF domain D3H41_RS18135 PF00990 Diguanylate cyclase, GGDEF domain D3H41_RS18135 PF00563 EAL domain D3H41_RS18135 PF00360 Phytochrome region D3H41_RS18140 PF00990 Diguanylate cyclase, GGDEF domain D3H41_RS18155 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch D3H41_RS18155 PF05222 Alanine dehydrogenase/PNT, N-terminal domain D3H41_RS18155 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D3H41_RS18160 PF02233 NAD(P) transhydrogenase beta subunit D3H41_RS18170 PF00486 Transcriptional regulatory protein, C terminal D3H41_RS18170 PF00072 Response regulator receiver domain D3H41_RS18185 PF03701 Uncharacterised protein family (UPF0181) D3H41_RS18200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS18200 PF03466 LysR substrate binding domain D3H41_RS18240 PF05707 Zonular occludens toxin (Zot) D3H41_RS18290 PF01253 Translation initiation factor SUI1 D3H41_RS18300 PF01820 D-ala D-ala ligase N-terminus D3H41_RS18300 PF07478 D-ala D-ala ligase C-terminus D3H41_RS18305 PF05036 Sporulation related domain D3H41_RS18310 PF13380 CoA binding domain D3H41_RS18310 PF13607 Succinyl-CoA ligase like flavodoxin domain D3H41_RS18310 PF00583 Acetyltransferase (GNAT) family D3H41_RS18315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS18315 PF03466 LysR substrate binding domain D3H41_RS18320 PF00593 TonB dependent receptor D3H41_RS18320 PF04886 PT repeat D3H41_RS18320 PF07715 TonB-dependent Receptor Plug Domain D3H41_RS18330 PF16363 GDP-mannose 4,6 dehydratase D3H41_RS18335 PF05231 MASE1 D3H41_RS18335 PF00990 Diguanylate cyclase, GGDEF domain D3H41_RS18335 PF00563 EAL domain D3H41_RS18335 PF08448 PAS fold D3H41_RS18335 PF13426 PAS domain D3H41_RS18335 PF08447 PAS fold D3H41_RS18340 PF03746 LamB/YcsF family D3H41_RS18345 PF02682 Carboxyltransferase domain, subdomain C and D D3H41_RS18350 PF02626 Carboxyltransferase domain, subdomain A and B D3H41_RS18365 PF00005 ABC transporter D3H41_RS18370 PF13472 GDSL-like Lipase/Acylhydrolase family D3H41_RS18375 PF12241 Trans-2-enoyl-CoA reductase catalytic region D3H41_RS18375 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase D3H41_RS18375 PF07055 Enoyl reductase FAD binding domain D3H41_RS18380 PF00990 Diguanylate cyclase, GGDEF domain D3H41_RS18380 PF13188 PAS domain D3H41_RS18380 PF03707 Bacterial signalling protein N terminal repeat D3H41_RS18380 PF00563 EAL domain D3H41_RS18390 PF00226 DnaJ domain D3H41_RS18390 PF01556 DnaJ C terminal domain D3H41_RS18390 PF00684 DnaJ central domain D3H41_RS18415 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3H41_RS18415 PF12793 Sugar transport-related sRNA regulator N-term D3H41_RS18425 PF03061 Thioesterase superfamily D3H41_RS18440 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D3H41_RS18445 PF12262 Bacterial virulence factor lipase N-terminal D3H41_RS18465 PF03741 Integral membrane protein TerC family D3H41_RS18470 PF00149 Calcineurin-like phosphoesterase D3H41_RS18470 PF02872 5'-nucleotidase, C-terminal domain D3H41_RS18475 PF11398 Protein of unknown function (DUF2813) D3H41_RS18480 PF06496 Protein of unknown function (DUF1097) D3H41_RS18485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS18485 PF03466 LysR substrate binding domain D3H41_RS18490 PF01226 Formate/nitrite transporter D3H41_RS18495 PF04264 YceI-like domain D3H41_RS18500 PF01292 Prokaryotic cytochrome b561 D3H41_RS18520 PF00270 DEAD/DEAH box helicase D3H41_RS18520 PF00271 Helicase conserved C-terminal domain D3H41_RS18525 PF04336 Acyl carrier protein phosphodiesterase D3H41_RS18535 PF12729 Four helix bundle sensory module for signal transduction D3H41_RS18535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_RS18535 PF00672 HAMP domain D3H41_RS18545 PF13419 Haloacid dehalogenase-like hydrolase D3H41_RS18560 PF00294 pfkB family carbohydrate kinase D3H41_RS18565 PF01268 Formate--tetrahydrofolate ligase D3H41_RS18570 PF00483 Nucleotidyl transferase D3H41_RS18575 PF00704 Glycosyl hydrolases family 18 D3H41_RS18575 PF06483 Chitinase C D3H41_RS18585 PF06719 AraC-type transcriptional regulator N-terminus D3H41_RS18585 PF12833 Helix-turn-helix domain D3H41_RS18590 PF00465 Iron-containing alcohol dehydrogenase D3H41_RS18600 PF00005 ABC transporter D3H41_RS18605 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS18610 PF00497 Bacterial extracellular solute-binding proteins, family 3 D3H41_RS18615 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS18620 PF00989 PAS fold D3H41_RS18620 PF00990 Diguanylate cyclase, GGDEF domain D3H41_RS18620 PF01590 GAF domain D3H41_RS18620 PF00563 EAL domain D3H41_RS18635 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D3H41_RS18635 PF00356 Bacterial regulatory proteins, lacI family D3H41_RS18640 PF00381 PTS HPr component phosphorylation site D3H41_RS18640 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D3H41_RS18645 PF00294 pfkB family carbohydrate kinase D3H41_RS18650 PF02378 Phosphotransferase system, EIIC D3H41_RS18650 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D3H41_RS18660 PF00873 AcrB/AcrD/AcrF family D3H41_RS18680 PF01571 Aminomethyltransferase folate-binding domain D3H41_RS18680 PF08669 Glycine cleavage T-protein C-terminal barrel domain D3H41_RS18690 PF00464 Serine hydroxymethyltransferase D3H41_RS18695 PF01597 Glycine cleavage H-protein D3H41_RS18700 PF02347 Glycine cleavage system P-protein D3H41_RS18705 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D3H41_RS18715 PF00753 Metallo-beta-lactamase superfamily D3H41_RS18715 PF16123 Hydroxyacylglutathione hydrolase C-terminus D3H41_RS18720 PF03466 LysR substrate binding domain D3H41_RS18720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS18725 PF00892 EamA-like transporter family D3H41_RS18730 PF02627 Carboxymuconolactone decarboxylase family D3H41_RS18735 PF12833 Helix-turn-helix domain D3H41_RS18785 PF07733 Bacterial DNA polymerase III alpha NTPase domain D3H41_RS18785 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D3H41_RS18785 PF11490 DNA polymerase III polC-type N-terminus II D3H41_RS18785 PF14579 Helix-hairpin-helix motif D3H41_RS18785 PF00929 Exonuclease D3H41_RS18785 PF02811 PHP domain D3H41_RS18795 PF00664 ABC transporter transmembrane region D3H41_RS18795 PF00005 ABC transporter D3H41_RS18815 PF02253 Phospholipase A1 D3H41_RS18825 PF09278 MerR, DNA binding D3H41_RS18825 PF00376 MerR family regulatory protein D3H41_RS18830 PF01327 Polypeptide deformylase D3H41_RS18865 PF01769 Divalent cation transporter D3H41_RS18865 PF03448 MgtE intracellular N domain D3H41_RS18865 PF00571 CBS domain D3H41_RS18885 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D3H41_RS18890 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D3H41_RS18900 PF01757 Acyltransferase family D3H41_RS18910 PF09722 Protein of unknown function (DUF2384) D3H41_RS18915 PF00141 Peroxidase D3H41_RS18920 PF01645 Conserved region in glutamate synthase D3H41_RS18920 PF13187 4Fe-4S dicluster domain D3H41_RS18930 PF00171 Aldehyde dehydrogenase family D3H41_RS18945 PF00892 EamA-like transporter family D3H41_RS18950 PF00893 Small Multidrug Resistance protein D3H41_RS18970 PF00892 EamA-like transporter family D3H41_RS18980 PF08334 Type II secretion system (T2SS), protein G D3H41_RS18980 PF07963 Prokaryotic N-terminal methylation motif D3H41_RS18985 PF01584 CheW-like domain D3H41_RS18985 PF00072 Response regulator receiver domain D3H41_RS18995 PF00072 Response regulator receiver domain D3H41_RS18995 PF00196 Bacterial regulatory proteins, luxR family D3H41_RS19005 PF00990 Diguanylate cyclase, GGDEF domain D3H41_RS19010 PF00072 Response regulator receiver domain D3H41_RS19010 PF00196 Bacterial regulatory proteins, luxR family D3H41_RS19015 PF00563 EAL domain D3H41_RS19015 PF00990 Diguanylate cyclase, GGDEF domain D3H41_RS19015 PF03707 Bacterial signalling protein N terminal repeat D3H41_RS19015 PF13188 PAS domain D3H41_RS19020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS19020 PF00512 His Kinase A (phospho-acceptor) domain D3H41_RS19020 PF09456 RcsC Alpha-Beta-Loop (ABL) D3H41_RS19020 PF00072 Response regulator receiver domain D3H41_RS19025 PF01926 50S ribosome-binding GTPase D3H41_RS19030 PF00155 Aminotransferase class I and II D3H41_RS19035 PF00072 Response regulator receiver domain D3H41_RS19035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS19045 PF00814 Glycoprotease family D3H41_RS19045 PF00583 Acetyltransferase (GNAT) family D3H41_RS19055 PF03606 C4-dicarboxylate anaerobic carrier D3H41_RS19070 PF08774 VRR-NUC domain D3H41_RS19070 PF18081 Fanconi anemia-associated nuclease SAP domain D3H41_RS19080 PF04076 Bacterial OB fold (BOF) protein D3H41_RS19085 PF00781 Diacylglycerol kinase catalytic domain D3H41_RS19090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS19090 PF03466 LysR substrate binding domain D3H41_RS19095 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D3H41_RS19095 PF01872 RibD C-terminal domain D3H41_RS19110 PF00092 von Willebrand factor type A domain D3H41_RS19125 PF07726 ATPase family associated with various cellular activities (AAA) D3H41_RS19125 PF17863 AAA lid domain D3H41_RS19130 PF04055 Radical SAM superfamily D3H41_RS19130 PF13186 Iron-sulfur cluster-binding domain D3H41_RS19135 PF00884 Sulfatase D3H41_RS19135 PF16385 Domain of unknown function D3H41_RS19140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS19140 PF03466 LysR substrate binding domain D3H41_RS19145 PF00884 Sulfatase D3H41_RS19150 PF00486 Transcriptional regulatory protein, C terminal D3H41_RS19150 PF00072 Response regulator receiver domain D3H41_RS19165 PF00072 Response regulator receiver domain D3H41_RS19165 PF01627 Hpt domain D3H41_RS19165 PF00672 HAMP domain D3H41_RS19165 PF00512 His Kinase A (phospho-acceptor) domain D3H41_RS19165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS19170 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D3H41_RS19175 PF02142 MGS-like domain D3H41_RS19180 PF00580 UvrD/REP helicase N-terminal domain D3H41_RS19180 PF12462 DNA helicase IV / RNA helicase N terminal D3H41_RS19180 PF13361 UvrD-like helicase C-terminal domain D3H41_RS19185 PF12805 FUSC-like inner membrane protein yccS D3H41_RS19220 PF07715 TonB-dependent Receptor Plug Domain D3H41_RS19220 PF00593 TonB dependent receptor D3H41_RS19230 PF13411 MerR HTH family regulatory protein D3H41_RS19235 PF00005 ABC transporter D3H41_RS19240 PF01032 FecCD transport family D3H41_RS19245 PF01032 FecCD transport family D3H41_RS19250 PF01497 Periplasmic binding protein D3H41_RS19260 PF01048 Phosphorylase superfamily D3H41_RS19265 PF04973 Nicotinamide mononucleotide transporter D3H41_RS19275 PF00356 Bacterial regulatory proteins, lacI family D3H41_RS19280 PF00294 pfkB family carbohydrate kinase D3H41_RS19285 PF13407 Periplasmic binding protein domain D3H41_RS19290 PF02653 Branched-chain amino acid transport system / permease component D3H41_RS19295 PF00005 ABC transporter D3H41_RS19300 PF05025 RbsD / FucU transport protein family D3H41_RS19305 PF00563 EAL domain D3H41_RS19305 PF00990 Diguanylate cyclase, GGDEF domain D3H41_RS19355 PF04116 Fatty acid hydroxylase superfamily D3H41_RS19365 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain D3H41_RS19365 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase D3H41_RS19375 PF09308 LuxQ, periplasmic D3H41_RS19375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS19375 PF00512 His Kinase A (phospho-acceptor) domain D3H41_RS19375 PF00072 Response regulator receiver domain D3H41_RS19380 PF00034 Cytochrome c D3H41_RS19380 PF03150 Di-haem cytochrome c peroxidase D3H41_RS19390 PF01145 SPFH domain / Band 7 family D3H41_RS19390 PF16200 C-terminal region of band_7 D3H41_RS19400 PF00881 Nitroreductase family D3H41_RS19405 PF00005 ABC transporter D3H41_RS19405 PF00571 CBS domain D3H41_RS19410 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS19415 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D3H41_RS19420 PF05199 GMC oxidoreductase D3H41_RS19420 PF00732 GMC oxidoreductase D3H41_RS19425 PF00171 Aldehyde dehydrogenase family D3H41_RS19430 PF13977 BetI-type transcriptional repressor, C-terminal D3H41_RS19430 PF00440 Bacterial regulatory proteins, tetR family D3H41_RS19435 PF00990 Diguanylate cyclase, GGDEF domain D3H41_RS19435 PF00072 Response regulator receiver domain D3H41_RS19445 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D3H41_RS19445 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D3H41_RS19455 PF00378 Enoyl-CoA hydratase/isomerase D3H41_RS19460 PF02770 Acyl-CoA dehydrogenase, middle domain D3H41_RS19460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D3H41_RS19460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D3H41_RS19465 PF00171 Aldehyde dehydrogenase family D3H41_RS19470 PF02803 Thiolase, C-terminal domain D3H41_RS19470 PF00108 Thiolase, N-terminal domain D3H41_RS19475 PF09278 MerR, DNA binding D3H41_RS19475 PF00376 MerR family regulatory protein D3H41_RS19480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D3H41_RS19480 PF02770 Acyl-CoA dehydrogenase, middle domain D3H41_RS19480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D3H41_RS19485 PF01039 Carboxyl transferase domain D3H41_RS19490 PF00378 Enoyl-CoA hydratase/isomerase D3H41_RS19495 PF00289 Biotin carboxylase, N-terminal domain D3H41_RS19495 PF00364 Biotin-requiring enzyme D3H41_RS19495 PF02785 Biotin carboxylase C-terminal domain D3H41_RS19495 PF18140 Propionyl-coenzyme A carboxylase BT domain D3H41_RS19495 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D3H41_RS19500 PF00682 HMGL-like D3H41_RS19510 PF12795 Mechanosensitive ion channel porin domain D3H41_RS19510 PF00924 Mechanosensitive ion channel D3H41_RS19510 PF12794 Mechanosensitive ion channel inner membrane domain 1 D3H41_RS19520 PF14602 Hexapeptide repeat of succinyl-transferase D3H41_RS19520 PF12464 Maltose acetyltransferase D3H41_RS19525 PF00392 Bacterial regulatory proteins, gntR family D3H41_RS19525 PF00155 Aminotransferase class I and II D3H41_RS19530 PF01654 Cytochrome bd terminal oxidase subunit I D3H41_RS19535 PF02322 Cytochrome bd terminal oxidase subunit II D3H41_RS19550 PF13419 Haloacid dehalogenase-like hydrolase D3H41_RS19555 PF03466 LysR substrate binding domain D3H41_RS19555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS19560 PF03306 Alpha-acetolactate decarboxylase D3H41_RS19565 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D3H41_RS19565 PF00205 Thiamine pyrophosphate enzyme, central domain D3H41_RS19565 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D3H41_RS19570 PF00106 short chain dehydrogenase D3H41_RS19575 PF05724 Thiopurine S-methyltransferase (TPMT) D3H41_RS19580 PF00501 AMP-binding enzyme D3H41_RS19580 PF14535 AMP-binding enzyme C-terminal domain D3H41_RS19585 PF00005 ABC transporter D3H41_RS19605 PF00501 AMP-binding enzyme D3H41_RS19610 PF00005 ABC transporter D3H41_RS19610 PF12399 Branched-chain amino acid ATP-binding cassette transporter D3H41_RS19625 PF01012 Electron transfer flavoprotein domain D3H41_RS19630 PF01012 Electron transfer flavoprotein domain D3H41_RS19630 PF00766 Electron transfer flavoprotein FAD-binding domain D3H41_RS19635 PF00501 AMP-binding enzyme D3H41_RS19635 PF13193 AMP-binding enzyme C-terminal domain D3H41_RS19640 PF02378 Phosphotransferase system, EIIC D3H41_RS19640 PF00367 phosphotransferase system, EIIB D3H41_RS19645 PF02056 Family 4 glycosyl hydrolase D3H41_RS19645 PF11975 Family 4 glycosyl hydrolase C-terminal domain D3H41_RS19650 PF07702 UTRA domain D3H41_RS19650 PF00392 Bacterial regulatory proteins, gntR family D3H41_RS19655 PF03334 Na+/H+ antiporter subunit D3H41_RS19660 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) D3H41_RS19665 PF01899 Na+/H+ ion antiporter subunit D3H41_RS19670 PF00361 Proton-conducting membrane transporter D3H41_RS19675 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L D3H41_RS19680 PF00361 Proton-conducting membrane transporter D3H41_RS19680 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus D3H41_RS19680 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter D3H41_RS19680 PF13244 Domain of unknown function (DUF4040) D3H41_RS19690 PF00582 Universal stress protein family D3H41_RS19695 PF00106 short chain dehydrogenase D3H41_RS19700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS19700 PF03466 LysR substrate binding domain D3H41_RS19710 PF07690 Major Facilitator Superfamily D3H41_RS19735 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE D3H41_RS19765 PF01037 Lrp/AsnC ligand binding domain D3H41_RS19775 PF05947 Type VI secretion system, TssF D3H41_RS19785 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath D3H41_RS19800 PF00069 Protein kinase domain D3H41_RS19825 PF04717 Type VI secretion system, phage-baseplate injector D3H41_RS19830 PF05638 Type VI secretion system effector, Hcp D3H41_RS19835 PF00004 ATPase family associated with various cellular activities (AAA) D3H41_RS19835 PF10431 C-terminal, D2-small domain, of ClpB protein D3H41_RS19835 PF17871 AAA lid domain D3H41_RS19835 PF07724 AAA domain (Cdc48 subfamily) D3H41_RS19840 PF00158 Sigma-54 interaction domain D3H41_RS19840 PF00072 Response regulator receiver domain D3H41_RS19840 PF02954 Bacterial regulatory protein, Fis family D3H41_RS19865 PF08525 Opacity-associated protein A N-terminal motif D3H41_RS19865 PF01476 LysM domain D3H41_RS19865 PF01551 Peptidase family M23 D3H41_RS19870 PF00132 Bacterial transferase hexapeptide (six repeats) D3H41_RS19875 PF00144 Beta-lactamase D3H41_RS19880 PF00392 Bacterial regulatory proteins, gntR family D3H41_RS19880 PF00155 Aminotransferase class I and II D3H41_RS19895 PF01370 NAD dependent epimerase/dehydratase family D3H41_RS19895 PF02911 Formyl transferase, C-terminal domain D3H41_RS19895 PF00551 Formyl transferase D3H41_RS19915 PF01565 FAD binding domain D3H41_RS19915 PF08031 Berberine and berberine like D3H41_RS19925 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family D3H41_RS19930 PF00478 IMP dehydrogenase / GMP reductase domain D3H41_RS19935 PF03853 YjeF-related protein N-terminus D3H41_RS19935 PF01256 Carbohydrate kinase D3H41_RS19945 PF00072 Response regulator receiver domain D3H41_RS19950 PF00248 Aldo/keto reductase family D3H41_RS19965 PF00654 Voltage gated chloride channel D3H41_RS19975 PF01227 GTP cyclohydrolase I D3H41_RS19980 PF03454 MoeA C-terminal region (domain IV) D3H41_RS19980 PF03453 MoeA N-terminal region (domain I and II) D3H41_RS19980 PF00994 Probable molybdopterin binding domain D3H41_RS19985 PF00899 ThiF family D3H41_RS20000 PF00581 Rhodanese-like domain D3H41_RS20020 PF00923 Transaldolase/Fructose-6-phosphate aldolase D3H41_RS20025 PF02780 Transketolase, C-terminal domain D3H41_RS20025 PF00456 Transketolase, thiamine diphosphate binding domain D3H41_RS20025 PF02779 Transketolase, pyrimidine binding domain D3H41_RS20030 PF08447 PAS fold D3H41_RS20030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_RS20035 PF07690 Major Facilitator Superfamily D3H41_RS20040 PF00793 DAHP synthetase I family D3H41_RS20050 PF00691 OmpA family D3H41_RS20050 PF01389 OmpA-like transmembrane domain D3H41_RS20055 PF13419 Haloacid dehalogenase-like hydrolase D3H41_RS20060 PF00472 RF-1 domain D3H41_RS20065 PF12729 Four helix bundle sensory module for signal transduction D3H41_RS20065 PF00672 HAMP domain D3H41_RS20065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_RS20070 PF00873 AcrB/AcrD/AcrF family D3H41_RS20075 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D3H41_RS20080 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D3H41_RS20085 PF01546 Peptidase family M20/M25/M40 D3H41_RS20085 PF07687 Peptidase dimerisation domain D3H41_RS20100 PF00072 Response regulator receiver domain D3H41_RS20100 PF00196 Bacterial regulatory proteins, luxR family D3H41_RS20105 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term D3H41_RS20105 PF07730 Histidine kinase D3H41_RS20105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS20105 PF00672 HAMP domain D3H41_RS20110 PF12838 4Fe-4S dicluster domain D3H41_RS20110 PF13187 4Fe-4S dicluster domain D3H41_RS20120 PF01568 Molydopterin dinucleotide binding domain D3H41_RS20120 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D3H41_RS20120 PF00384 Molybdopterin oxidoreductase D3H41_RS20125 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) D3H41_RS20130 PF03264 NapC/NirT cytochrome c family, N-terminal region D3H41_RS20140 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus D3H41_RS20150 PF00108 Thiolase, N-terminal domain D3H41_RS20150 PF02803 Thiolase, C-terminal domain D3H41_RS20155 PF00106 short chain dehydrogenase D3H41_RS20160 PF01810 LysE type translocator D3H41_RS20170 PF07549 SecD/SecF GG Motif D3H41_RS20170 PF02355 Protein export membrane protein D3H41_RS20175 PF07549 SecD/SecF GG Motif D3H41_RS20175 PF13721 SecD export protein N-terminal TM region D3H41_RS20175 PF02355 Protein export membrane protein D3H41_RS20205 PF01037 Lrp/AsnC ligand binding domain D3H41_RS20225 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D3H41_RS20225 PF00529 HlyD membrane-fusion protein of T1SS D3H41_RS20230 PF01047 MarR family D3H41_RS20235 PF00072 Response regulator receiver domain D3H41_RS20235 PF09308 LuxQ, periplasmic D3H41_RS20235 PF00512 His Kinase A (phospho-acceptor) domain D3H41_RS20235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS20240 PF13407 Periplasmic binding protein domain D3H41_RS20250 PF01541 GIY-YIG catalytic domain D3H41_RS20255 PF04337 Protein of unknown function, DUF480 D3H41_RS20265 PF04363 Protein of unknown function (DUF496) D3H41_RS20270 PF01554 MatE D3H41_RS20275 PF00072 Response regulator receiver domain D3H41_RS20275 PF00672 HAMP domain D3H41_RS20275 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D3H41_RS20275 PF00512 His Kinase A (phospho-acceptor) domain D3H41_RS20275 PF01627 Hpt domain D3H41_RS20275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS20280 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D3H41_RS20280 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D3H41_RS20300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS20300 PF03466 LysR substrate binding domain D3H41_RS20315 PF13520 Amino acid permease D3H41_RS20320 PF00392 Bacterial regulatory proteins, gntR family D3H41_RS20320 PF00155 Aminotransferase class I and II D3H41_RS20330 PF00512 His Kinase A (phospho-acceptor) domain D3H41_RS20330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS20330 PF00672 HAMP domain D3H41_RS20330 PF16527 Two-component sensor protein CpxA, periplasmic domain D3H41_RS20335 PF00486 Transcriptional regulatory protein, C terminal D3H41_RS20335 PF00072 Response regulator receiver domain D3H41_RS20350 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term D3H41_RS20350 PF12833 Helix-turn-helix domain D3H41_RS20360 PF00529 HlyD membrane-fusion protein of T1SS D3H41_RS20360 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D3H41_RS20365 PF03109 ABC1 family D3H41_RS20370 PF01769 Divalent cation transporter D3H41_RS20370 PF03448 MgtE intracellular N domain D3H41_RS20370 PF00571 CBS domain D3H41_RS20375 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin D3H41_RS20380 PF07969 Amidohydrolase family D3H41_RS20385 PF01966 HD domain D3H41_RS20400 PF07690 Major Facilitator Superfamily D3H41_RS20410 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D3H41_RS20415 PF00255 Glutathione peroxidase D3H41_RS20430 PF01323 DSBA-like thioredoxin domain D3H41_RS20445 PF00486 Transcriptional regulatory protein, C terminal D3H41_RS20445 PF00072 Response regulator receiver domain D3H41_RS20450 PF00512 His Kinase A (phospho-acceptor) domain D3H41_RS20450 PF16527 Two-component sensor protein CpxA, periplasmic domain D3H41_RS20450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS20450 PF00672 HAMP domain D3H41_RS20460 PF01219 Prokaryotic diacylglycerol kinase D3H41_RS20465 PF00884 Sulfatase D3H41_RS20465 PF08019 Phosphoethanolamine transferase EptA/EptB D3H41_RS20470 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D3H41_RS20485 PF01734 Patatin-like phospholipase D3H41_RS20490 PF02678 Pirin D3H41_RS20490 PF05726 Pirin C-terminal cupin domain D3H41_RS20495 PF00313 'Cold-shock' DNA-binding domain D3H41_RS20510 PF00962 Adenosine/AMP deaminase D3H41_RS20515 PF08534 Redoxin D3H41_RS20515 PF00462 Glutaredoxin D3H41_RS20525 PF07943 Penicillin-binding protein 5, C-terminal domain D3H41_RS20525 PF00768 D-alanyl-D-alanine carboxypeptidase D3H41_RS20535 PF02798 Glutathione S-transferase, N-terminal domain D3H41_RS20545 PF08244 Glycosyl hydrolases family 32 C terminal D3H41_RS20545 PF00251 Glycosyl hydrolases family 32 N-terminal domain D3H41_RS20550 PF00294 pfkB family carbohydrate kinase D3H41_RS20555 PF02378 Phosphotransferase system, EIIC D3H41_RS20555 PF00367 phosphotransferase system, EIIB D3H41_RS20560 PF00356 Bacterial regulatory proteins, lacI family D3H41_RS20565 PF11471 Maltoporin periplasmic N-terminal extension D3H41_RS20565 PF02264 LamB porin D3H41_RS20615 PF03466 LysR substrate binding domain D3H41_RS20615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS20620 PF12833 Helix-turn-helix domain D3H41_RS20620 PF01497 Periplasmic binding protein D3H41_RS20625 PF00155 Aminotransferase class I and II D3H41_RS20650 PF00271 Helicase conserved C-terminal domain D3H41_RS20650 PF00270 DEAD/DEAH box helicase D3H41_RS20660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS20660 PF03466 LysR substrate binding domain D3H41_RS20665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS20665 PF03466 LysR substrate binding domain D3H41_RS20675 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D3H41_RS20680 PF08240 Alcohol dehydrogenase GroES-like domain D3H41_RS20680 PF00107 Zinc-binding dehydrogenase D3H41_RS20700 PF00155 Aminotransferase class I and II D3H41_RS20700 PF00392 Bacterial regulatory proteins, gntR family D3H41_RS20705 PF00557 Metallopeptidase family M24 D3H41_RS20705 PF01321 Creatinase/Prolidase N-terminal domain D3H41_RS20710 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family D3H41_RS20715 PF01037 Lrp/AsnC ligand binding domain D3H41_RS20720 PF00171 Aldehyde dehydrogenase family D3H41_RS20725 PF00202 Aminotransferase class-III D3H41_RS20730 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) D3H41_RS20745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS20745 PF03466 LysR substrate binding domain D3H41_RS20750 PF00709 Adenylosuccinate synthetase D3H41_RS20755 PF17763 Glutaminase/Asparaginase C-terminal domain D3H41_RS20755 PF00710 Asparaginase, N-terminal D3H41_RS20760 PF03618 Kinase/pyrophosphorylase D3H41_RS20765 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain D3H41_RS20765 PF02896 PEP-utilising enzyme, TIM barrel domain D3H41_RS20765 PF00391 PEP-utilising enzyme, mobile domain D3H41_RS20775 PF00196 Bacterial regulatory proteins, luxR family D3H41_RS20775 PF00072 Response regulator receiver domain D3H41_RS20780 PF00579 tRNA synthetases class I (W and Y) D3H41_RS20785 PF13416 Bacterial extracellular solute-binding protein D3H41_RS20800 PF02837 Glycosyl hydrolases family 2, sugar binding domain D3H41_RS20800 PF02836 Glycosyl hydrolases family 2, TIM barrel domain D3H41_RS20800 PF00703 Glycosyl hydrolases family 2 D3H41_RS20800 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 D3H41_RS20805 PF02028 BCCT, betaine/carnitine/choline family transporter D3H41_RS20810 PF07702 UTRA domain D3H41_RS20810 PF00392 Bacterial regulatory proteins, gntR family D3H41_RS20835 PF08402 TOBE domain D3H41_RS20835 PF00005 ABC transporter D3H41_RS20855 PF00873 AcrB/AcrD/AcrF family D3H41_RS20875 PF00873 AcrB/AcrD/AcrF family D3H41_RS20880 PF13533 Biotin-lipoyl like D3H41_RS20885 PF13091 PLD-like domain D3H41_RS20890 PF00398 Ribosomal RNA adenine dimethylase D3H41_RS20910 PF00376 MerR family regulatory protein D3H41_RS20910 PF09278 MerR, DNA binding D3H41_RS20925 PF03466 LysR substrate binding domain D3H41_RS20925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS20935 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D3H41_RS20935 PF13378 Enolase C-terminal domain-like D3H41_RS20945 PF14492 Elongation Factor G, domain II D3H41_RS20945 PF03764 Elongation factor G, domain IV D3H41_RS20945 PF00009 Elongation factor Tu GTP binding domain D3H41_RS20945 PF03144 Elongation factor Tu domain 2 D3H41_RS20945 PF00679 Elongation factor G C-terminus D3H41_RS20970 PF02001 Protein of unknown function DUF134 D3H41_RS20980 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS20985 PF00571 CBS domain D3H41_RS20985 PF00005 ABC transporter D3H41_RS20990 PF17185 NlpE C-terminal OB domain D3H41_RS20990 PF04170 NlpE N-terminal domain D3H41_RS20995 PF06629 MltA-interacting protein MipA D3H41_RS21010 PF03466 LysR substrate binding domain D3H41_RS21010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS21035 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain D3H41_RS21035 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family D3H41_RS21045 PF00857 Isochorismatase family D3H41_RS21060 PF00455 DeoR C terminal sensor domain D3H41_RS21060 PF08220 DeoR-like helix-turn-helix domain D3H41_RS21065 PF01641 SelR domain D3H41_RS21065 PF01625 Peptide methionine sulfoxide reductase D3H41_RS21070 PF03060 Nitronate monooxygenase D3H41_RS21075 PF13520 Amino acid permease D3H41_RS21080 PF05985 Ethanolamine ammonia-lyase light chain (EutC) D3H41_RS21085 PF06751 Ethanolamine ammonia lyase large subunit (EutB) D3H41_RS21090 PF12833 Helix-turn-helix domain D3H41_RS21095 PF00440 Bacterial regulatory proteins, tetR family D3H41_RS21095 PF08359 YsiA-like protein, C-terminal region D3H41_RS21110 PF03466 LysR substrate binding domain D3H41_RS21110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS21115 PF01810 LysE type translocator D3H41_RS21125 PF00118 TCP-1/cpn60 chaperonin family D3H41_RS21130 PF00166 Chaperonin 10 Kd subunit D3H41_RS21140 PF00581 Rhodanese-like domain D3H41_RS21155 PF01070 FMN-dependent dehydrogenase D3H41_RS21175 PF00669 Bacterial flagellin N-terminal helical region D3H41_RS21180 PF00460 Flagella basal body rod protein D3H41_RS21180 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D3H41_RS21185 PF10135 Rod binding protein D3H41_RS21185 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase D3H41_RS21190 PF02119 Flagellar P-ring protein D3H41_RS21195 PF02107 Flagellar L-ring protein D3H41_RS21200 PF00460 Flagella basal body rod protein D3H41_RS21200 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D3H41_RS21205 PF00460 Flagella basal body rod protein D3H41_RS21205 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D3H41_RS21210 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D3H41_RS21210 PF00460 Flagella basal body rod protein D3H41_RS21210 PF07559 Flagellar basal body protein FlaE D3H41_RS21215 PF03963 Flagellar hook capping protein - N-terminal region D3H41_RS21215 PF13860 FlgD Ig-like domain D3H41_RS21215 PF13861 FlgD Tudor-like domain D3H41_RS21220 PF00460 Flagella basal body rod protein D3H41_RS21220 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D3H41_RS21225 PF00460 Flagella basal body rod protein D3H41_RS21245 PF01464 Transglycosylase SLT domain D3H41_RS21250 PF08264 Anticodon-binding domain of tRNA D3H41_RS21250 PF00133 tRNA synthetases class I (I, L, M and V) D3H41_RS21270 PF03315 Serine dehydratase beta chain D3H41_RS21270 PF03313 Serine dehydratase alpha chain D3H41_RS21280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS21280 PF03466 LysR substrate binding domain D3H41_RS21285 PF03466 LysR substrate binding domain D3H41_RS21285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS21290 PF01389 OmpA-like transmembrane domain D3H41_RS21290 PF00691 OmpA family D3H41_RS21295 PF00246 Zinc carboxypeptidase D3H41_RS21295 PF18027 Cytosolic carboxypeptidase N-terminal domain D3H41_RS21300 PF01266 FAD dependent oxidoreductase D3H41_RS21310 PF04393 Protein of unknown function (DUF535) D3H41_RS21325 PF00392 Bacterial regulatory proteins, gntR family D3H41_RS21325 PF07702 UTRA domain D3H41_RS21330 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS21335 PF00005 ABC transporter D3H41_RS21345 PF00266 Aminotransferase class-V D3H41_RS21350 PF00202 Aminotransferase class-III D3H41_RS21355 PF13419 Haloacid dehalogenase-like hydrolase D3H41_RS21360 PF00356 Bacterial regulatory proteins, lacI family D3H41_RS21365 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D3H41_RS21375 PF03611 PTS system sugar-specific permease component D3H41_RS21385 PF05922 Peptidase inhibitor I9 D3H41_RS21385 PF00082 Subtilase family D3H41_RS21390 PF00657 GDSL-like Lipase/Acylhydrolase D3H41_RS21395 PF00440 Bacterial regulatory proteins, tetR family D3H41_RS21405 PF02321 Outer membrane efflux protein D3H41_RS21410 PF02687 FtsX-like permease family D3H41_RS21410 PF00005 ABC transporter D3H41_RS21410 PF12704 MacB-like periplasmic core domain D3H41_RS21415 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D3H41_RS21420 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D3H41_RS21425 PF00194 Eukaryotic-type carbonic anhydrase D3H41_RS21430 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) D3H41_RS21445 PF13419 Haloacid dehalogenase-like hydrolase D3H41_RS21450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS21450 PF03466 LysR substrate binding domain D3H41_RS21485 PF14602 Hexapeptide repeat of succinyl-transferase D3H41_RS21485 PF12464 Maltose acetyltransferase D3H41_RS21490 PF02566 OsmC-like protein D3H41_RS21535 PF02566 OsmC-like protein D3H41_RS21540 PF01641 SelR domain D3H41_RS21540 PF01625 Peptide methionine sulfoxide reductase D3H41_RS21555 PF04244 Deoxyribodipyrimidine photo-lyase-related protein D3H41_RS21560 PF00875 DNA photolyase D3H41_RS21560 PF03441 FAD binding domain of DNA photolyase D3H41_RS21565 PF00990 Diguanylate cyclase, GGDEF domain D3H41_RS21580 PF00990 Diguanylate cyclase, GGDEF domain D3H41_RS21580 PF05230 MASE2 domain D3H41_RS21595 PF01773 Na+ dependent nucleoside transporter N-terminus D3H41_RS21595 PF07670 Nucleoside recognition D3H41_RS21595 PF07662 Na+ dependent nucleoside transporter C-terminus D3H41_RS21615 PF01212 Beta-eliminating lyase D3H41_RS21620 PF03116 NQR2, RnfD, RnfE family D3H41_RS21625 PF01654 Cytochrome bd terminal oxidase subunit I D3H41_RS21630 PF02322 Cytochrome bd terminal oxidase subunit II D3H41_RS21650 PF04229 GrpB protein D3H41_RS21655 PF01266 FAD dependent oxidoreductase D3H41_RS21675 PF05525 Branched-chain amino acid transport protein D3H41_RS21680 PF00990 Diguanylate cyclase, GGDEF domain D3H41_RS21685 PF00072 Response regulator receiver domain D3H41_RS21685 PF00158 Sigma-54 interaction domain D3H41_RS21685 PF02954 Bacterial regulatory protein, Fis family D3H41_RS21690 PF00512 His Kinase A (phospho-acceptor) domain D3H41_RS21690 PF02743 Cache domain D3H41_RS21690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS21695 PF00232 Glycosyl hydrolase family 1 D3H41_RS21710 PF03466 LysR substrate binding domain D3H41_RS21710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS21720 PF12706 Beta-lactamase superfamily domain D3H41_RS21735 PF18030 RimK PreATP-grasp domain D3H41_RS21735 PF08443 RimK-like ATP-grasp domain D3H41_RS21740 PF18030 RimK PreATP-grasp domain D3H41_RS21740 PF08443 RimK-like ATP-grasp domain D3H41_RS21745 PF00753 Metallo-beta-lactamase superfamily D3H41_RS21750 PF17810 Arginine decarboxylase helical bundle domain D3H41_RS21750 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D3H41_RS21750 PF17944 Arginine decarboxylase C-terminal helical extension D3H41_RS21755 PF00491 Arginase family D3H41_RS21760 PF07690 Major Facilitator Superfamily D3H41_RS21765 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain D3H41_RS21765 PF00326 Prolyl oligopeptidase family D3H41_RS21780 PF00950 ABC 3 transport family D3H41_RS21785 PF00005 ABC transporter D3H41_RS21790 PF01297 Zinc-uptake complex component A periplasmic D3H41_RS21835 PF02472 Biopolymer transport protein ExbD/TolR D3H41_RS21840 PF01618 MotA/TolQ/ExbB proton channel family D3H41_RS21845 PF01618 MotA/TolQ/ExbB proton channel family D3H41_RS21855 PF07715 TonB-dependent Receptor Plug Domain D3H41_RS21855 PF00593 TonB dependent receptor D3H41_RS21860 PF00672 HAMP domain D3H41_RS21860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS21860 PF00512 His Kinase A (phospho-acceptor) domain D3H41_RS21860 PF16750 Sensor domain of 2-component histidine kinase D3H41_RS21865 PF00486 Transcriptional regulatory protein, C terminal D3H41_RS21865 PF00072 Response regulator receiver domain D3H41_RS21870 PF03009 Glycerophosphoryl diester phosphodiesterase family D3H41_RS21880 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D3H41_RS21880 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D3H41_RS21885 PF10928 Protein of unknown function (DUF2810) D3H41_RS21940 PF04013 Putative SAM-dependent RNA methyltransferase D3H41_RS21945 PF01523 Putative modulator of DNA gyrase D3H41_RS21950 PF01523 Putative modulator of DNA gyrase D3H41_RS21955 PF08543 Phosphomethylpyrimidine kinase D3H41_RS21960 PF00005 ABC transporter D3H41_RS21965 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS21970 PF09084 NMT1/THI5 like D3H41_RS21975 PF03070 TENA/THI-4/PQQC family D3H41_RS21980 PF02110 Hydroxyethylthiazole kinase family D3H41_RS21985 PF02581 Thiamine monophosphate synthase D3H41_RS21995 PF01568 Molydopterin dinucleotide binding domain D3H41_RS21995 PF18364 Molybdopterin oxidoreductase N-terminal domain D3H41_RS21995 PF00384 Molybdopterin oxidoreductase D3H41_RS22000 PF03264 NapC/NirT cytochrome c family, N-terminal region D3H41_RS22005 PF13302 Acetyltransferase (GNAT) domain D3H41_RS22025 PF00583 Acetyltransferase (GNAT) family D3H41_RS22045 PF00155 Aminotransferase class I and II D3H41_RS22045 PF00392 Bacterial regulatory proteins, gntR family D3H41_RS22050 PF02595 Glycerate kinase family D3H41_RS22055 PF02447 GntP family permease D3H41_RS22060 PF17853 GGDEF-like domain D3H41_RS22060 PF05651 Putative sugar diacid recognition D3H41_RS22060 PF13556 PucR C-terminal helix-turn-helix domain D3H41_RS22095 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D3H41_RS22100 PF12706 Beta-lactamase superfamily domain D3H41_RS22110 PF07690 Major Facilitator Superfamily D3H41_RS22115 PF13533 Biotin-lipoyl like D3H41_RS22120 PF03922 OmpW family D3H41_RS22125 PF13599 Pentapeptide repeats (9 copies) D3H41_RS22145 PF01037 Lrp/AsnC ligand binding domain D3H41_RS22150 PF01810 LysE type translocator D3H41_RS22155 PF04954 Siderophore-interacting protein D3H41_RS22155 PF08021 Siderophore-interacting FAD-binding domain D3H41_RS22160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS22160 PF03466 LysR substrate binding domain D3H41_RS22165 PF00797 N-acetyltransferase D3H41_RS22170 PF08240 Alcohol dehydrogenase GroES-like domain D3H41_RS22170 PF00107 Zinc-binding dehydrogenase D3H41_RS22175 PF00756 Putative esterase D3H41_RS22185 PF00990 Diguanylate cyclase, GGDEF domain D3H41_RS22185 PF17152 Periplasmic sensor domain D3H41_RS22200 PF03466 LysR substrate binding domain D3H41_RS22200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS22215 PF00849 RNA pseudouridylate synthase D3H41_RS22220 PF01554 MatE D3H41_RS22225 PF00563 EAL domain D3H41_RS22225 PF00990 Diguanylate cyclase, GGDEF domain D3H41_RS22235 PF06865 Pyrimidine/purine nucleoside phosphorylase D3H41_RS22245 PF00704 Glycosyl hydrolases family 18 D3H41_RS22245 PF08329 Chitinase A, N-terminal domain D3H41_RS22250 PF12697 Alpha/beta hydrolase family D3H41_RS22265 PF03600 Citrate transporter D3H41_RS22275 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 D3H41_RS22285 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain D3H41_RS22285 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D3H41_RS22290 PF12833 Helix-turn-helix domain D3H41_RS22290 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain D3H41_RS22290 PF02805 Metal binding domain of Ada D3H41_RS22290 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D3H41_RS22300 PF07681 DoxX D3H41_RS22305 PF17954 Quercetinase C-terminal cupin domain D3H41_RS22305 PF02678 Pirin D3H41_RS22310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS22310 PF03466 LysR substrate binding domain D3H41_RS22325 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase D3H41_RS22335 PF03616 Sodium/glutamate symporter D3H41_RS22340 PF00155 Aminotransferase class I and II D3H41_RS22340 PF00392 Bacterial regulatory proteins, gntR family D3H41_RS22345 PF00005 ABC transporter D3H41_RS22355 PF03616 Sodium/glutamate symporter D3H41_RS22375 PF00672 HAMP domain D3H41_RS22375 PF17200 Single Cache domain 2 D3H41_RS22375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_RS22380 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D3H41_RS22385 PF00072 Response regulator receiver domain D3H41_RS22385 PF04397 LytTr DNA-binding domain D3H41_RS22390 PF07694 5TMR of 5TMR-LYT D3H41_RS22390 PF06580 Histidine kinase D3H41_RS22390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS22390 PF13492 GAF domain D3H41_RS22410 PF00005 ABC transporter D3H41_RS22420 PF01098 Cell cycle protein D3H41_RS22425 PF01709 Transcriptional regulator D3H41_RS22435 PF17149 Periplasmic sensor domain found in signal transduction proteins D3H41_RS22435 PF00672 HAMP domain D3H41_RS22435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS22435 PF00512 His Kinase A (phospho-acceptor) domain D3H41_RS22435 PF01627 Hpt domain D3H41_RS22435 PF00072 Response regulator receiver domain D3H41_RS22445 PF00925 GTP cyclohydrolase II D3H41_RS22445 PF08719 Domain of unknown function (DUF1768) D3H41_RS22455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3H41_RS22455 PF00005 ABC transporter D3H41_RS22460 PF00005 ABC transporter D3H41_RS22460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3H41_RS22475 PF18607 ParA helix turn helix domain D3H41_RS22475 PF13614 AAA domain D3H41_RS22480 PF08775 ParB family D3H41_RS22480 PF02195 ParB-like nuclease domain D3H41_RS22485 PF05127 Helicase D3H41_RS22485 PF13718 GNAT acetyltransferase 2 D3H41_RS22495 PF00132 Bacterial transferase hexapeptide (six repeats) D3H41_RS22500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS22500 PF03466 LysR substrate binding domain D3H41_RS22505 PF03575 Peptidase family S51 D3H41_RS22510 PF00267 Gram-negative porin D3H41_RS22515 PF02378 Phosphotransferase system, EIIC D3H41_RS22515 PF00367 phosphotransferase system, EIIB D3H41_RS22520 PF01380 SIS domain D3H41_RS22530 PF01380 SIS domain D3H41_RS22530 PF01418 Helix-turn-helix domain, rpiR family D3H41_RS22535 PF00246 Zinc carboxypeptidase D3H41_RS22540 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3H41_RS22545 PF03358 NADPH-dependent FMN reductase D3H41_RS22555 PF00664 ABC transporter transmembrane region D3H41_RS22555 PF03412 Peptidase C39 family D3H41_RS22555 PF00005 ABC transporter D3H41_RS22570 PF00529 HlyD membrane-fusion protein of T1SS D3H41_RS22575 PF00158 Sigma-54 interaction domain D3H41_RS22575 PF00072 Response regulator receiver domain D3H41_RS22575 PF02954 Bacterial regulatory protein, Fis family D3H41_RS22580 PF00512 His Kinase A (phospho-acceptor) domain D3H41_RS22580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS22580 PF02743 Cache domain D3H41_RS22585 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region D3H41_RS22585 PF01243 Pyridoxamine 5'-phosphate oxidase D3H41_RS22595 PF12833 Helix-turn-helix domain D3H41_RS22600 PF14850 DNA-binding domain of Proline dehydrogenase D3H41_RS22600 PF00171 Aldehyde dehydrogenase family D3H41_RS22600 PF18327 Proline utilization A proline dehydrogenase N-terminal domain D3H41_RS22600 PF01619 Proline dehydrogenase D3H41_RS22610 PF00474 Sodium:solute symporter family D3H41_RS22640 PF01037 Lrp/AsnC ligand binding domain D3H41_RS22650 PF00664 ABC transporter transmembrane region D3H41_RS22650 PF00005 ABC transporter D3H41_RS22660 PF00270 DEAD/DEAH box helicase D3H41_RS22660 PF00271 Helicase conserved C-terminal domain D3H41_RS22665 PF03475 3-alpha domain D3H41_RS22665 PF03473 MOSC domain D3H41_RS22685 PF04542 Sigma-70 region 2 D3H41_RS22685 PF08281 Sigma-70, region 4 D3H41_RS22690 PF01965 DJ-1/PfpI family D3H41_RS22690 PF12833 Helix-turn-helix domain D3H41_RS22700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS22700 PF03466 LysR substrate binding domain D3H41_RS22730 PF13192 Thioredoxin domain D3H41_RS22730 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3H41_RS22735 PF00578 AhpC/TSA family D3H41_RS22735 PF10417 C-terminal domain of 1-Cys peroxiredoxin D3H41_RS22740 PF01047 MarR family D3H41_RS22745 PF02566 OsmC-like protein D3H41_RS22775 PF12704 MacB-like periplasmic core domain D3H41_RS22775 PF02687 FtsX-like permease family D3H41_RS22780 PF00005 ABC transporter D3H41_RS22795 PF00535 Glycosyl transferase family 2 D3H41_RS22805 PF08241 Methyltransferase domain D3H41_RS22815 PF01136 Peptidase family U32 D3H41_RS22825 PF02378 Phosphotransferase system, EIIC D3H41_RS22825 PF00367 phosphotransferase system, EIIB D3H41_RS22835 PF00072 Response regulator receiver domain D3H41_RS22835 PF00486 Transcriptional regulatory protein, C terminal D3H41_RS22840 PF00512 His Kinase A (phospho-acceptor) domain D3H41_RS22840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS22840 PF08521 Two-component sensor kinase N-terminal D3H41_RS22845 PF01547 Bacterial extracellular solute-binding protein D3H41_RS22850 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D3H41_RS22850 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D3H41_RS22855 PF06276 Ferric iron reductase FhuF-like transporter D3H41_RS22855 PF04183 IucA / IucC family D3H41_RS22865 PF04183 IucA / IucC family D3H41_RS22865 PF06276 Ferric iron reductase FhuF-like transporter D3H41_RS22870 PF00206 Lyase D3H41_RS22870 PF02655 ATP-grasp domain D3H41_RS22875 PF00593 TonB dependent receptor D3H41_RS22875 PF07715 TonB-dependent Receptor Plug Domain D3H41_RS22880 PF00593 TonB dependent receptor D3H41_RS22880 PF07660 Secretin and TonB N terminus short domain D3H41_RS22880 PF07715 TonB-dependent Receptor Plug Domain D3H41_RS22885 PF01497 Periplasmic binding protein D3H41_RS22890 PF01032 FecCD transport family D3H41_RS22895 PF01032 FecCD transport family D3H41_RS22900 PF00005 ABC transporter D3H41_RS22905 PF00672 HAMP domain D3H41_RS22905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_RS22905 PF17200 Single Cache domain 2 D3H41_RS22910 PF05193 Peptidase M16 inactive domain D3H41_RS22910 PF00675 Insulinase (Peptidase family M16) D3H41_RS22920 PF04225 Opacity-associated protein A LysM-like domain D3H41_RS22920 PF01551 Peptidase family M23 D3H41_RS22935 PF07690 Major Facilitator Superfamily D3H41_RS22940 PF00239 Resolvase, N terminal domain D3H41_RS22940 PF02796 Helix-turn-helix domain of resolvase D3H41_RS22945 PF00356 Bacterial regulatory proteins, lacI family D3H41_RS22950 PF00474 Sodium:solute symporter family D3H41_RS22965 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component D3H41_RS22965 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D3H41_RS22975 PF03480 Bacterial extracellular solute-binding protein, family 7 D3H41_RS22980 PF00356 Bacterial regulatory proteins, lacI family D3H41_RS22985 PF03328 HpcH/HpaI aldolase/citrate lyase family D3H41_RS22990 PF00815 Histidinol dehydrogenase D3H41_RS23005 PF12697 Alpha/beta hydrolase family D3H41_RS23020 PF07690 Major Facilitator Superfamily D3H41_RS23025 PF00474 Sodium:solute symporter family D3H41_RS23030 PF03315 Serine dehydratase beta chain D3H41_RS23030 PF03313 Serine dehydratase alpha chain D3H41_RS23035 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D3H41_RS23035 PF00128 Alpha amylase, catalytic domain D3H41_RS23040 PF02264 LamB porin D3H41_RS23060 PF00128 Alpha amylase, catalytic domain D3H41_RS23060 PF16657 Maltogenic Amylase, C-terminal domain D3H41_RS23060 PF02903 Alpha amylase, N-terminal ig-like domain D3H41_RS23065 PF04231 Endonuclease I D3H41_RS23070 PF17967 Pullulanase N2 domain D3H41_RS23070 PF03714 Bacterial pullanase-associated domain D3H41_RS23070 PF18494 Pullulanase Ins domain D3H41_RS23070 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D3H41_RS23070 PF11852 Domain of unknown function (DUF3372) D3H41_RS23085 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain D3H41_RS23085 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain D3H41_RS23085 PF01276 Orn/Lys/Arg decarboxylase, major domain D3H41_RS23090 PF13520 Amino acid permease D3H41_RS23100 PF08543 Phosphomethylpyrimidine kinase D3H41_RS23105 PF00375 Sodium:dicarboxylate symporter family D3H41_RS23110 PF03193 RsgA GTPase D3H41_RS23115 PF02378 Phosphotransferase system, EIIC D3H41_RS23115 PF00367 phosphotransferase system, EIIB D3H41_RS23120 PF02630 SCO1/SenC D3H41_RS23135 PF17874 MalT-like TPR region D3H41_RS23135 PF00196 Bacterial regulatory proteins, luxR family D3H41_RS23140 PF00343 Carbohydrate phosphorylase D3H41_RS23145 PF02446 4-alpha-glucanotransferase D3H41_RS23150 PF02806 Alpha amylase, C-terminal all-beta domain D3H41_RS23150 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D3H41_RS23150 PF00128 Alpha amylase, catalytic domain D3H41_RS23155 PF00912 Transglycosylase D3H41_RS23160 PF00128 Alpha amylase, catalytic domain D3H41_RS23175 PF07670 Nucleoside recognition D3H41_RS23180 PF07670 Nucleoside recognition D3H41_RS23185 PF01546 Peptidase family M20/M25/M40 D3H41_RS23185 PF07687 Peptidase dimerisation domain D3H41_RS23190 PF06803 Protein of unknown function (DUF1232) D3H41_RS23205 PF00375 Sodium:dicarboxylate symporter family D3H41_RS23215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS23215 PF03466 LysR substrate binding domain D3H41_RS23220 PF08803 Putative mono-oxygenase ydhR D3H41_RS23230 PF13614 AAA domain D3H41_RS23230 PF13807 G-rich domain on putative tyrosine kinase D3H41_RS23230 PF02706 Chain length determinant protein D3H41_RS23235 PF01451 Low molecular weight phosphotyrosine protein phosphatase D3H41_RS23240 PF02563 Polysaccharide biosynthesis/export protein D3H41_RS23240 PF18412 Outer-membrane lipoprotein Wza C-terminal domain D3H41_RS23240 PF10531 SLBB domain D3H41_RS23245 PF00881 Nitroreductase family D3H41_RS23250 PF01914 MarC family integral membrane protein D3H41_RS23255 PF01734 Patatin-like phospholipase D3H41_RS23260 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading D3H41_RS23260 PF18416 N-acetylglucosamine binding protein domain 2 D3H41_RS23265 PF02469 Fasciclin domain D3H41_RS23270 PF00875 DNA photolyase D3H41_RS23270 PF03441 FAD binding domain of DNA photolyase D3H41_RS23280 PF00581 Rhodanese-like domain D3H41_RS23280 PF17773 UPF0176 acylphosphatase like domain D3H41_RS23285 PF00561 alpha/beta hydrolase fold D3H41_RS23290 PF00768 D-alanyl-D-alanine carboxypeptidase D3H41_RS23290 PF07943 Penicillin-binding protein 5, C-terminal domain D3H41_RS23295 PF00128 Alpha amylase, catalytic domain D3H41_RS23295 PF00686 Starch binding domain D3H41_RS23300 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term D3H41_RS23300 PF12833 Helix-turn-helix domain D3H41_RS23305 PF00881 Nitroreductase family D3H41_RS23315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS23315 PF03466 LysR substrate binding domain D3H41_RS23320 PF09905 DNA-binding protein VF530 D3H41_RS23330 PF00175 Oxidoreductase NAD-binding domain D3H41_RS23330 PF00970 Oxidoreductase FAD-binding domain D3H41_RS23340 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) D3H41_RS23345 PF01594 AI-2E family transporter D3H41_RS23355 PF13533 Biotin-lipoyl like D3H41_RS23380 PF00892 EamA-like transporter family D3H41_RS23385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS23385 PF03466 LysR substrate binding domain D3H41_RS23390 PF07690 Major Facilitator Superfamily D3H41_RS23405 PF00583 Acetyltransferase (GNAT) family D3H41_RS23415 PF00486 Transcriptional regulatory protein, C terminal D3H41_RS23415 PF00072 Response regulator receiver domain D3H41_RS23420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS23420 PF00512 His Kinase A (phospho-acceptor) domain D3H41_RS23420 PF00672 HAMP domain D3H41_RS23440 PF00923 Transaldolase/Fructose-6-phosphate aldolase D3H41_RS23445 PF04055 Radical SAM superfamily D3H41_RS23450 PF02901 Pyruvate formate lyase-like D3H41_RS23450 PF01228 Glycine radical D3H41_RS23470 PF08000 Bacterial PH domain D3H41_RS23485 PF00691 OmpA family D3H41_RS23485 PF13677 Membrane MotB of proton-channel complex MotA/MotB D3H41_RS23490 PF01618 MotA/TolQ/ExbB proton channel family D3H41_RS23495 PF04542 Sigma-70 region 2 D3H41_RS23495 PF04545 Sigma-70, region 4 D3H41_RS23500 PF03748 Flagellar basal body-associated protein FliL D3H41_RS23515 PF02561 Flagellar protein FliS D3H41_RS23520 PF07196 Flagellin hook IN motif D3H41_RS23520 PF02465 Flagellar hook-associated protein 2 N-terminus D3H41_RS23520 PF07195 Flagellar hook-associated protein 2 C-terminus D3H41_RS23530 PF00669 Bacterial flagellin N-terminal helical region D3H41_RS23530 PF00700 Bacterial flagellin C-terminal helical region D3H41_RS23540 PF00771 FHIPEP family D3H41_RS23545 PF01312 FlhB HrpN YscU SpaS Family D3H41_RS23550 PF01311 Bacterial export proteins, family 1 D3H41_RS23555 PF01313 Bacterial export proteins, family 3 D3H41_RS23560 PF00813 FliP family D3H41_RS23565 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D3H41_RS23580 PF00158 Sigma-54 interaction domain D3H41_RS23580 PF02954 Bacterial regulatory protein, Fis family D3H41_RS23580 PF00072 Response regulator receiver domain D3H41_RS23585 PF02049 Flagellar hook-basal body complex protein FliE D3H41_RS23590 PF01514 Secretory protein of YscJ/FliF family D3H41_RS23590 PF08345 Flagellar M-ring protein C-terminal D3H41_RS23595 PF14841 FliG middle domain D3H41_RS23595 PF14842 FliG N-terminal domain D3H41_RS23595 PF01706 FliG C-terminal domain D3H41_RS23605 PF18269 T3SS EscN ATPase C-terminal domain D3H41_RS23605 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D3H41_RS23620 PF03466 LysR substrate binding domain D3H41_RS23620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS23655 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D3H41_RS23660 PF03466 LysR substrate binding domain D3H41_RS23660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS23680 PF00486 Transcriptional regulatory protein, C terminal D3H41_RS23680 PF00072 Response regulator receiver domain D3H41_RS23685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS23685 PF00512 His Kinase A (phospho-acceptor) domain D3H41_RS23685 PF08448 PAS fold D3H41_RS23685 PF13426 PAS domain D3H41_RS23685 PF00072 Response regulator receiver domain D3H41_RS23690 PF00080 Copper/zinc superoxide dismutase (SODC) D3H41_RS23705 PF00563 EAL domain D3H41_RS23705 PF13188 PAS domain D3H41_RS23705 PF00990 Diguanylate cyclase, GGDEF domain D3H41_RS23705 PF03707 Bacterial signalling protein N terminal repeat D3H41_RS23710 PF00155 Aminotransferase class I and II D3H41_RS23715 PF00107 Zinc-binding dehydrogenase D3H41_RS23715 PF08240 Alcohol dehydrogenase GroES-like domain D3H41_RS23745 PF00194 Eukaryotic-type carbonic anhydrase D3H41_RS23750 PF00924 Mechanosensitive ion channel D3H41_RS23760 PF01070 FMN-dependent dehydrogenase D3H41_RS23765 PF02652 L-lactate permease D3H41_RS23770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS23770 PF03466 LysR substrate binding domain D3H41_RS23775 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain D3H41_RS23775 PF00326 Prolyl oligopeptidase family D3H41_RS23780 PF00005 ABC transporter D3H41_RS23780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3H41_RS23790 PF05362 Lon protease (S16) C-terminal proteolytic domain D3H41_RS23790 PF13654 AAA domain D3H41_RS23795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_RS23795 PF00672 HAMP domain D3H41_RS23795 PF12729 Four helix bundle sensory module for signal transduction D3H41_RS23800 PF13609 Gram-negative porin D3H41_RS23805 PF07238 PilZ domain D3H41_RS23805 PF12945 Flagellar protein YcgR D3H41_RS23820 PF00583 Acetyltransferase (GNAT) family D3H41_RS23825 PF12800 4Fe-4S binding domain D3H41_RS23825 PF12838 4Fe-4S dicluster domain D3H41_RS23830 PF12801 4Fe-4S binding domain D3H41_RS23830 PF13237 4Fe-4S dicluster domain D3H41_RS23850 PF12558 ATP-binding cassette cobalt transporter D3H41_RS23850 PF00005 ABC transporter D3H41_RS23855 PF07155 ECF-type riboflavin transporter, S component D3H41_RS23860 PF00529 HlyD membrane-fusion protein of T1SS D3H41_RS23860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D3H41_RS23865 PF11742 Protein of unknown function (DUF3302) D3H41_RS23885 PF01048 Phosphorylase superfamily D3H41_RS23890 PF08349 Protein of unknown function (DUF1722) D3H41_RS23895 PF13411 MerR HTH family regulatory protein D3H41_RS23900 PF03441 FAD binding domain of DNA photolyase D3H41_RS23900 PF00875 DNA photolyase D3H41_RS23905 PF01476 LysM domain D3H41_RS23905 PF03734 L,D-transpeptidase catalytic domain D3H41_RS23905 PF17969 L,D-transpeptidase C-terminal domain D3H41_RS23915 PF00271 Helicase conserved C-terminal domain D3H41_RS23915 PF00270 DEAD/DEAH box helicase D3H41_RS23920 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain D3H41_RS23920 PF00326 Prolyl oligopeptidase family D3H41_RS23925 PF07715 TonB-dependent Receptor Plug Domain D3H41_RS23925 PF00593 TonB dependent receptor D3H41_RS23945 PF00672 HAMP domain D3H41_RS23945 PF12729 Four helix bundle sensory module for signal transduction D3H41_RS23945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_RS23950 PF12849 PBP superfamily domain D3H41_RS23955 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS23960 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS23965 PF00005 ABC transporter D3H41_RS23985 PF13519 von Willebrand factor type A domain D3H41_RS23990 PF13519 von Willebrand factor type A domain D3H41_RS24000 PF01882 Protein of unknown function DUF58 D3H41_RS24005 PF07726 ATPase family associated with various cellular activities (AAA) D3H41_RS24005 PF17863 AAA lid domain D3H41_RS24010 PF02743 Cache domain D3H41_RS24010 PF00672 HAMP domain D3H41_RS24010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_RS24020 PF00196 Bacterial regulatory proteins, luxR family D3H41_RS24025 PF00196 Bacterial regulatory proteins, luxR family D3H41_RS24035 PF00005 ABC transporter D3H41_RS24035 PF00664 ABC transporter transmembrane region D3H41_RS24040 PF00529 HlyD membrane-fusion protein of T1SS D3H41_RS24050 PF01032 FecCD transport family D3H41_RS24055 PF01497 Periplasmic binding protein D3H41_RS24060 PF00005 ABC transporter D3H41_RS24065 PF00593 TonB dependent receptor D3H41_RS24065 PF07715 TonB-dependent Receptor Plug Domain D3H41_RS24070 PF00005 ABC transporter D3H41_RS24070 PF00664 ABC transporter transmembrane region D3H41_RS24075 PF13493 Domain of unknown function (DUF4118) D3H41_RS24075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS24075 PF00512 His Kinase A (phospho-acceptor) domain D3H41_RS24075 PF02702 Osmosensitive K+ channel His kinase sensor domain D3H41_RS24080 PF00486 Transcriptional regulatory protein, C terminal D3H41_RS24080 PF00072 Response regulator receiver domain D3H41_RS24085 PF02254 TrkA-N domain D3H41_RS24085 PF02080 TrkA-C domain D3H41_RS24090 PF02386 Cation transport protein D3H41_RS24095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS24095 PF03466 LysR substrate binding domain D3H41_RS24100 PF02028 BCCT, betaine/carnitine/choline family transporter D3H41_RS24105 PF00355 Rieske [2Fe-2S] domain D3H41_RS24105 PF00848 Ring hydroxylating alpha subunit (catalytic domain) D3H41_RS24110 PF00171 Aldehyde dehydrogenase family D3H41_RS24115 PF18113 Rubredoxin binding C-terminal domain D3H41_RS24115 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3H41_RS24120 PF01266 FAD dependent oxidoreductase D3H41_RS24130 PF00127 Copper binding proteins, plastocyanin/azurin family D3H41_RS24135 PF13419 Haloacid dehalogenase-like hydrolase D3H41_RS24145 PF01590 GAF domain D3H41_RS24145 PF00158 Sigma-54 interaction domain D3H41_RS24150 PF00753 Metallo-beta-lactamase superfamily D3H41_RS24150 PF00258 Flavodoxin D3H41_RS24150 PF00301 Rubredoxin D3H41_RS24155 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3H41_RS24155 PF18113 Rubredoxin binding C-terminal domain D3H41_RS24165 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D3H41_RS24165 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D3H41_RS24170 PF06628 Catalase-related immune-responsive D3H41_RS24170 PF00199 Catalase D3H41_RS24175 PF13417 Glutathione S-transferase, N-terminal domain D3H41_RS24180 PF00107 Zinc-binding dehydrogenase D3H41_RS24180 PF16884 N-terminal domain of oxidoreductase D3H41_RS24185 PF16925 Tetracyclin repressor-like, C-terminal domain D3H41_RS24185 PF00440 Bacterial regulatory proteins, tetR family D3H41_RS24190 PF04266 ASCH domain D3H41_RS24220 PF00534 Glycosyl transferases group 1 D3H41_RS24220 PF13439 Glycosyltransferase Family 4 D3H41_RS24230 PF02706 Chain length determinant protein D3H41_RS24230 PF13807 G-rich domain on putative tyrosine kinase D3H41_RS24230 PF13614 AAA domain D3H41_RS24245 PF02397 Bacterial sugar transferase D3H41_RS24250 PF08402 TOBE domain D3H41_RS24250 PF00005 ABC transporter D3H41_RS24255 PF01547 Bacterial extracellular solute-binding protein D3H41_RS24260 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS24260 PF14785 Maltose transport system permease protein MalF P2 domain D3H41_RS24265 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS24295 PF05661 Protein of unknown function (DUF808) D3H41_RS24300 PF01979 Amidohydrolase family D3H41_RS24310 PF01679 Proteolipid membrane potential modulator D3H41_RS24315 PF00111 2Fe-2S iron-sulfur cluster binding domain D3H41_RS24315 PF00111 2Fe-2S iron-sulfur cluster binding domain D3H41_RS24315 PF03473 MOSC domain D3H41_RS24315 PF03476 MOSC N-terminal beta barrel domain D3H41_RS24315 PF03473 MOSC domain D3H41_RS24315 PF03476 MOSC N-terminal beta barrel domain D3H41_RS24320 PF02540 NAD synthase D3H41_RS24325 PF01467 Cytidylyltransferase-like D3H41_RS24365 PF00005 ABC transporter D3H41_RS24370 PF01032 FecCD transport family D3H41_RS24380 PF02472 Biopolymer transport protein ExbD/TolR D3H41_RS24385 PF01618 MotA/TolQ/ExbB proton channel family D3H41_RS24390 PF03544 Gram-negative bacterial TonB protein C-terminal D3H41_RS24395 PF04055 Radical SAM superfamily D3H41_RS24400 PF06228 Haem utilisation ChuX/HutX D3H41_RS24405 PF01243 Pyridoxamine 5'-phosphate oxidase D3H41_RS24415 PF00072 Response regulator receiver domain D3H41_RS24415 PF01584 CheW-like domain D3H41_RS24425 PF07508 Recombinase D3H41_RS24425 PF00239 Resolvase, N terminal domain D3H41_RS24425 PF13408 Recombinase zinc beta ribbon domain D3H41_RS24430 PF00239 Resolvase, N terminal domain D3H41_RS24430 PF02796 Helix-turn-helix domain of resolvase D3H41_RS24455 PF01554 MatE D3H41_RS24460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3H41_RS24460 PF00005 ABC transporter D3H41_RS24465 PF00005 ABC transporter D3H41_RS24465 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3H41_RS24470 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3H41_RS24475 PF00528 Binding-protein-dependent transport system inner membrane component D3H41_RS24480 PF00455 DeoR C terminal sensor domain D3H41_RS24480 PF08220 DeoR-like helix-turn-helix domain D3H41_RS24485 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D3H41_RS24485 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D3H41_RS24490 PF17042 Nucleotide-binding C-terminal domain D3H41_RS24490 PF07005 Sugar-binding N-terminal domain D3H41_RS24495 PF00596 Class II Aldolase and Adducin N-terminal domain D3H41_RS24500 PF01261 Xylose isomerase-like TIM barrel D3H41_RS24505 PF01370 NAD dependent epimerase/dehydratase family D3H41_RS24510 PF02447 GntP family permease D3H41_RS24515 PF02583 Metal-sensitive transcriptional repressor D3H41_RS24520 PF03824 High-affinity nickel-transport protein D3H41_RS24525 PF02743 Cache domain D3H41_RS24525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_RS24525 PF00672 HAMP domain D3H41_RS24530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS24530 PF03466 LysR substrate binding domain D3H41_RS24535 PF17848 Acetyl-coA carboxylase zinc finger domain D3H41_RS24535 PF01039 Carboxyl transferase domain D3H41_RS24545 PF08453 Peptidase family M9 N-terminal D3H41_RS24545 PF01752 Collagenase D3H41_RS24545 PF04151 Bacterial pre-peptidase C-terminal domain D3H41_RS24555 PF02627 Carboxymuconolactone decarboxylase family D3H41_RS24560 PF13411 MerR HTH family regulatory protein D3H41_RS24565 PF00128 Alpha amylase, catalytic domain D3H41_RS24580 PF02254 TrkA-N domain D3H41_RS24580 PF00999 Sodium/hydrogen exchanger family D3H41_RS24585 PF02525 Flavodoxin-like fold D3H41_RS24590 PF00582 Universal stress protein family D3H41_RS24595 PF00005 ABC transporter D3H41_RS24595 PF16326 ABC transporter C-terminal domain D3H41_RS24595 PF12848 ABC transporter D3H41_RS24600 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain D3H41_RS24600 PF00326 Prolyl oligopeptidase family D3H41_RS24610 PF13533 Biotin-lipoyl like D3H41_RS24615 PF00873 AcrB/AcrD/AcrF family D3H41_RS24630 PF13302 Acetyltransferase (GNAT) domain D3H41_RS24640 PF00990 Diguanylate cyclase, GGDEF domain D3H41_RS24640 PF17151 Periplasmic sensor domain D3H41_RS24655 PF00873 AcrB/AcrD/AcrF family D3H41_RS24660 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D3H41_RS24675 PF12838 4Fe-4S dicluster domain D3H41_RS24675 PF00384 Molybdopterin oxidoreductase D3H41_RS24675 PF01568 Molydopterin dinucleotide binding domain D3H41_RS24675 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region D3H41_RS24675 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D3H41_RS24690 PF00005 ABC transporter D3H41_RS24700 PF02567 Phenazine biosynthesis-like protein D3H41_RS24705 PF01161 Phosphatidylethanolamine-binding protein D3H41_RS24715 PF01758 Sodium Bile acid symporter family D3H41_RS24730 PF01638 HxlR-like helix-turn-helix D3H41_RS24750 PF03466 LysR substrate binding domain D3H41_RS24750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS24755 PF00248 Aldo/keto reductase family D3H41_RS24760 PF03928 Haem-degrading D3H41_RS24780 PF03222 Tryptophan/tyrosine permease family D3H41_RS24790 PF02743 Cache domain D3H41_RS24790 PF00672 HAMP domain D3H41_RS24790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_RS24795 PF07670 Nucleoside recognition D3H41_RS24820 PF08525 Opacity-associated protein A N-terminal motif D3H41_RS24820 PF01551 Peptidase family M23 D3H41_RS24820 PF01476 LysM domain D3H41_RS24825 PF00990 Diguanylate cyclase, GGDEF domain D3H41_RS24825 PF00563 EAL domain D3H41_RS24825 PF08447 PAS fold D3H41_RS24825 PF08448 PAS fold D3H41_RS24830 PF03466 LysR substrate binding domain D3H41_RS24830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS24835 PF07690 Major Facilitator Superfamily D3H41_RS24850 PF00462 Glutaredoxin D3H41_RS24855 PF00892 EamA-like transporter family D3H41_RS24870 PF01557 Fumarylacetoacetate (FAA) hydrolase family D3H41_RS24890 PF01810 LysE type translocator D3H41_RS24900 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D3H41_RS24900 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D3H41_RS24900 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D3H41_RS24900 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D3H41_RS24905 PF02790 Cytochrome C oxidase subunit II, transmembrane domain D3H41_RS24905 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D3H41_RS24910 PF00115 Cytochrome C and Quinol oxidase polypeptide I D3H41_RS24915 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 D3H41_RS24920 PF00510 Cytochrome c oxidase subunit III D3H41_RS24940 PF02628 Cytochrome oxidase assembly protein D3H41_RS24945 PF01040 UbiA prenyltransferase family D3H41_RS24950 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D3H41_RS24950 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D3H41_RS24960 PF05736 OprF membrane domain D3H41_RS24960 PF00691 OmpA family D3H41_RS24980 PF00313 'Cold-shock' DNA-binding domain D3H41_RS24985 PF03889 Alternative ribosome-rescue factor A D3H41_RS24990 PF00990 Diguanylate cyclase, GGDEF domain D3H41_RS24995 PF04545 Sigma-70, region 4 D3H41_RS24995 PF04539 Sigma-70 region 3 D3H41_RS24995 PF04542 Sigma-70 region 2 D3H41_RS24995 PF00140 Sigma-70 factor, region 1.2 D3H41_RS25005 PF08021 Siderophore-interacting FAD-binding domain D3H41_RS25005 PF00664 ABC transporter transmembrane region D3H41_RS25005 PF00005 ABC transporter D3H41_RS25005 PF04954 Siderophore-interacting protein D3H41_RS25010 PF00664 ABC transporter transmembrane region D3H41_RS25010 PF00005 ABC transporter D3H41_RS25015 PF02321 Outer membrane efflux protein D3H41_RS25020 PF00072 Response regulator receiver domain D3H41_RS25020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3H41_RS25025 PF13533 Biotin-lipoyl like D3H41_RS25045 PF12729 Four helix bundle sensory module for signal transduction D3H41_RS25045 PF00672 HAMP domain D3H41_RS25045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_RS25050 PF00210 Ferritin-like domain D3H41_RS25060 PF07995 Glucose / Sorbosone dehydrogenase D3H41_RS25065 PF00465 Iron-containing alcohol dehydrogenase D3H41_RS25075 PF00892 EamA-like transporter family D3H41_RS25085 PF03466 LysR substrate binding domain D3H41_RS25085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3H41_RS25095 PF00501 AMP-binding enzyme D3H41_RS25095 PF13193 AMP-binding enzyme C-terminal domain D3H41_RS25100 PF00351 Biopterin-dependent aromatic amino acid hydroxylase D3H41_RS25105 PF01329 Pterin 4 alpha carbinolamine dehydratase D3H41_RS25125 PF12843 Putative quorum-sensing-regulated virulence factor D3H41_RS25135 PF01810 LysE type translocator D3H41_RS25140 PF00392 Bacterial regulatory proteins, gntR family D3H41_RS25140 PF07729 FCD domain D3H41_RS25155 PF01810 LysE type translocator