locus-tag	class	description
VIBNI_RS00010	COG0592	DNA-directed DNA polymerase activity
VIBNI_RS00015	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
VIBNI_RS00020	COG0187	DNA topoisomerase II activity
VIBNI_RS00025	COG0071	Belongs to the small heat shock protein (HSP20) family
VIBNI_RS00030	COG3977	Valine--pyruvate aminotransferase
VIBNI_RS00045	COG0751	glycine-tRNA ligase activity
VIBNI_RS00055	COG2119	membrane
VIBNI_RS00065	COG0425	Belongs to the sulfur carrier protein TusA family
VIBNI_RS00075	COG0604	alcohol dehydrogenase
VIBNI_RS00080	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
VIBNI_RS00085	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
VIBNI_RS00090	COG3454	Phosphonate metabolism
VIBNI_RS00095	COG4778	phosphonate C-P lyase system protein PhnL
VIBNI_RS00100	COG4107	phosphonate C-P lyase system protein PhnK
VIBNI_RS00105	COG3627	carbon phosphorus lyase activity
VIBNI_RS00110	COG3626	phosphonate metabolism
VIBNI_RS00115	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
VIBNI_RS00120	COG3624	Phosphonate C-P lyase system protein PhnG
VIBNI_RS00125	COG2188	Transcriptional regulator
VIBNI_RS00130	COG3639	organic phosphonate transmembrane transporter activity
VIBNI_RS00135	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
VIBNI_RS00140	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
VIBNI_RS00160	COG1739	Uncharacterized protein family UPF0029
VIBNI_RS00165	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
VIBNI_RS00230	COG0840	transmembrane signaling receptor activity
VIBNI_RS00275	COG2066	Belongs to the glutaminase family
VIBNI_RS00280	COG0635	Involved in the biosynthesis of porphyrin-containing compound
VIBNI_RS00285	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
VIBNI_RS00300	COG0762	integral membrane protein
VIBNI_RS00305	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
VIBNI_RS00310	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
VIBNI_RS00325	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
VIBNI_RS00330	COG1678	Uncharacterized ACR, COG1678
VIBNI_RS00335	COG0189	ligase activity
VIBNI_RS00340	COG1385	rRNA (uridine-N3-)-methyltransferase activity
VIBNI_RS00345	COG2356	endonuclease I
VIBNI_RS00360	COG1797	cobyrinic acid a,c-diamide synthase activity
VIBNI_RS00400	COG1903	Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
VIBNI_RS00405	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
VIBNI_RS00410	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
VIBNI_RS00415	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
VIBNI_RS00420	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
VIBNI_RS00425	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
VIBNI_RS00435	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
VIBNI_RS00445	COG0191	fructose-bisphosphate aldolase activity
VIBNI_RS00450	COG0668	transmembrane transport
VIBNI_RS00455	COG1279	arginine transmembrane transporter activity
VIBNI_RS00470	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
VIBNI_RS00475	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
VIBNI_RS00480	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
VIBNI_RS00485	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
VIBNI_RS00495	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
VIBNI_RS00500	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
VIBNI_RS00515	COG0354	folic acid binding
VIBNI_RS00520	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
VIBNI_RS00525	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
VIBNI_RS00530	COG1595	DNA-templated transcription, initiation
VIBNI_RS00535	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
VIBNI_RS00565	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
VIBNI_RS00570	COG1381	Involved in DNA repair and RecF pathway recombination
VIBNI_RS00575	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
VIBNI_RS00580	COG0736	holo-[acyl-carrier-protein] synthase activity
VIBNI_RS00600	COG2205	protein histidine kinase activity
VIBNI_RS00600	COG3437	response regulator, receiver
VIBNI_RS00600	COG3850	Histidine kinase
VIBNI_RS00600	COG4999	Histidine kinase
VIBNI_RS00610	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
VIBNI_RS00615	COG3956	TIGRFAM MazG family protein
VIBNI_RS00625	COG0148	phosphopyruvate hydratase activity
VIBNI_RS00630	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
VIBNI_RS00645	COG0585	pseudouridine synthase activity
VIBNI_RS00650	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
VIBNI_RS00665	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
VIBNI_RS00690	COG2255	four-way junction helicase activity
VIBNI_RS00700	COG3853	Toxic anion resistance protein (TelA)
VIBNI_RS00705	COG1546	Belongs to the CinA family
VIBNI_RS00710	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
VIBNI_RS00720	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
VIBNI_RS00725	COG0527	aspartate kinase activity
VIBNI_RS00730	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
VIBNI_RS00765	COG3630	sodium ion export across plasma membrane
VIBNI_RS00770	COG5016	pyruvate
VIBNI_RS00770	COG0511	ligase activity, forming carbon-carbon bonds
VIBNI_RS00775	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
VIBNI_RS00785	COG1238	metal cluster binding
VIBNI_RS00790	COG0612	Peptidase, M16
VIBNI_RS00805	COG1854	S-ribosylhomocysteine lyase activity
VIBNI_RS00815	COG4536	flavin adenine dinucleotide binding
VIBNI_RS00820	COG4137	Cytochrome C assembly protein
VIBNI_RS00825	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
VIBNI_RS00840	COG0336	Belongs to the RNA methyltransferase TrmD family
VIBNI_RS00850	COG0494	nUDIX hydrolase
VIBNI_RS00855	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
VIBNI_RS00860	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
VIBNI_RS00865	COG0237	dephospho-CoA kinase activity
VIBNI_RS00875	COG1459	type II secretion system
VIBNI_RS00880	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
VIBNI_RS00885	COG4969	Belongs to the N-Me-Phe pilin family
VIBNI_RS00890	COG0157	Belongs to the NadC ModD family
VIBNI_RS00900	COG2186	Transcriptional regulator
VIBNI_RS00905	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
VIBNI_RS00910	COG0508	dehydrogenase complex catalyzes the overall conversion of
VIBNI_RS00915	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
VIBNI_RS00930	COG0617	tRNA 3'-terminal CCA addition
VIBNI_RS00935	COG3409	Peptidoglycan-binding domain 1 protein
VIBNI_RS00935	COG3267	Type II secretory pathway component ExeA
VIBNI_RS00945	COG4991	sh3 domain protein
VIBNI_RS00950	COG0306	phosphate transporter
VIBNI_RS00955	COG1392	Phosphate transport regulator
VIBNI_RS00960	COG3025	triphosphatase activity
VIBNI_RS00970	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
VIBNI_RS00975	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
VIBNI_RS00975	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
VIBNI_RS00980	COG1538	Outer membrane efflux protein
VIBNI_RS00985	COG0494	nUDIX hydrolase
VIBNI_RS00990	COG3151	Protein conserved in bacteria
VIBNI_RS01000	COG3150	esterase
VIBNI_RS01020	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
VIBNI_RS01025	COG3105	Protein conserved in bacteria
VIBNI_RS01030	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
VIBNI_RS01040	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
VIBNI_RS01045	COG0723	plastoquinol--plastocyanin reductase activity
VIBNI_RS01050	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
VIBNI_RS01055	COG2857	Cytochrome c1
VIBNI_RS01060	COG0625	glutathione transferase activity
VIBNI_RS01065	COG2969	positive regulation of protein catabolic process
VIBNI_RS01070	COG2823	Periplasmic or secreted lipoprotein
VIBNI_RS01075	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
VIBNI_RS01080	COG0792	nuclease activity
VIBNI_RS01090	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
VIBNI_RS01105	COG3116	cell division
VIBNI_RS01110	COG0768	penicillin binding
VIBNI_RS01115	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
VIBNI_RS01120	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
VIBNI_RS01125	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
VIBNI_RS01130	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
VIBNI_RS01135	COG0772	Belongs to the SEDS family
VIBNI_RS01140	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
VIBNI_RS01145	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
VIBNI_RS01150	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
VIBNI_RS01155	COG0849	cell division
VIBNI_RS01160	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
VIBNI_RS01165	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
VIBNI_RS01175	COG0653	protein targeting
VIBNI_RS01185	COG0505	Belongs to the CarA family
VIBNI_RS01190	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
VIBNI_RS01205	COG2313	pseudouridylate synthase activity
VIBNI_RS01210	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
VIBNI_RS01210	COG1522	sequence-specific DNA binding
VIBNI_RS01215	COG1119	ATPase activity
VIBNI_RS01240	COG1028	Short-chain dehydrogenase reductase Sdr
VIBNI_RS01245	COG1172	Belongs to the binding-protein-dependent transport system permease family
VIBNI_RS01250	COG1129	ABC transporter
VIBNI_RS01255	COG1172	Belongs to the binding-protein-dependent transport system permease family
VIBNI_RS01265	COG1804	L-carnitine dehydratase bile acid-inducible protein F
VIBNI_RS01280	COG0251	oxidation-reduction process
VIBNI_RS01285	COG0814	amino acid
VIBNI_RS01310	COG2860	membrane
VIBNI_RS01315	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
VIBNI_RS01325	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
VIBNI_RS01345	COG5002	protein histidine kinase activity
VIBNI_RS01345	COG0784	Response regulator, receiver
VIBNI_RS01345	COG2198	Histidine kinase
VIBNI_RS01360	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
VIBNI_RS01365	COG0493	'glutamate synthase
VIBNI_RS01370	COG0067	glutamate synthase
VIBNI_RS01370	COG0069	glutamate synthase activity
VIBNI_RS01370	COG0070	glutamate synthase
VIBNI_RS01380	COG0067	glutamate synthase
VIBNI_RS01380	COG0070	glutamate synthase
VIBNI_RS01380	COG0069	glutamate synthase activity
VIBNI_RS01385	COG1242	4 iron, 4 sulfur cluster binding
VIBNI_RS01390	COG3706	GGDEF domain
VIBNI_RS01390	COG5001	Diguanylate cyclase
VIBNI_RS01390	COG2203	Gaf domain
VIBNI_RS01390	COG4251	negative regulation of phosphorylation
VIBNI_RS01395	COG2198	Histidine kinase
VIBNI_RS01395	COG5002	protein histidine kinase activity
VIBNI_RS01395	COG0784	Response regulator, receiver
VIBNI_RS01405	COG0745	RESPONSE REGULATOR receiver
VIBNI_RS01415	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
VIBNI_RS01430	COG0083	homoserine kinase activity
VIBNI_RS01435	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
VIBNI_RS01440	COG3445	Acts as a radical domain for damaged PFL and possibly other radical proteins
VIBNI_RS01445	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
VIBNI_RS01450	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
VIBNI_RS01465	COG1115	amino acid carrier protein
VIBNI_RS01470	COG2963	transposase activity
VIBNI_RS01475	COG2801	Transposase and inactivated derivatives
VIBNI_RS01480	COG3022	response to hydroperoxide
VIBNI_RS01495	COG2182	Extracellular solute-binding protein
VIBNI_RS01500	COG1175	transmembrane transport
VIBNI_RS01505	COG0395	ABC-type sugar transport system, permease component
VIBNI_RS01510	COG3842	ATPase activity
VIBNI_RS01520	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
VIBNI_RS01525	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
VIBNI_RS01535	COG1737	Transcriptional regulator
VIBNI_RS01540	COG0513	Belongs to the DEAD box helicase family
VIBNI_RS01545	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
VIBNI_RS01560	COG4974	Belongs to the 'phage' integrase family
VIBNI_RS01565	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
VIBNI_RS01570	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
VIBNI_RS01575	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
VIBNI_RS01580	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
VIBNI_RS01585	COG2204	response regulator
VIBNI_RS01595	COG0667	Aldo Keto reductase
VIBNI_RS01610	COG0494	nUDIX hydrolase
VIBNI_RS01615	COG3605	phosphoenolpyruvate-protein phosphotransferase activity
VIBNI_RS01620	COG0730	response to heat
VIBNI_RS01630	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
VIBNI_RS01655	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
VIBNI_RS01695	COG0210	DNA helicase
VIBNI_RS01710	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
VIBNI_RS01720	COG1283	sodium-dependent phosphate transmembrane transporter activity
VIBNI_RS01725	COG0583	DNA-binding transcription factor activity
VIBNI_RS01730	COG0640	Transcriptional regulator
VIBNI_RS01735	COG0268	Binds directly to 16S ribosomal RNA
VIBNI_RS01740	COG0728	peptidoglycan biosynthetic process
VIBNI_RS01745	COG0196	riboflavin kinase activity
VIBNI_RS01760	COG1047	Peptidyl-prolyl cis-trans
VIBNI_RS01765	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
VIBNI_RS01775	COG1966	Carbon starvation protein
VIBNI_RS01790	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
VIBNI_RS01795	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
VIBNI_RS01805	COG3279	Response regulator of the LytR AlgR family
VIBNI_RS01810	COG3275	phosphorelay sensor kinase activity
VIBNI_RS01815	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
VIBNI_RS01820	COG0287	Prephenate dehydrogenase
VIBNI_RS01820	COG1605	Chorismate mutase
VIBNI_RS01825	COG0739	heme binding
VIBNI_RS01835	COG0488	(ABC) transporter
VIBNI_RS01840	COG0741	lytic transglycosylase activity
VIBNI_RS01845	COG2973	This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon (5'- ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region
VIBNI_RS01850	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
VIBNI_RS01855	COG5001	Diguanylate cyclase
VIBNI_RS01860	COG1605	Chorismate mutase
VIBNI_RS01860	COG0077	Prephenate dehydratase
VIBNI_RS01865	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
VIBNI_RS01870	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
VIBNI_RS01875	COG0564	pseudouridine synthase activity
VIBNI_RS01880	COG1496	oxidoreductase activity
VIBNI_RS01885	COG0542	response to heat
VIBNI_RS01930	COG0811	peptide transport
VIBNI_RS01935	COG0811	peptide transport
VIBNI_RS01940	COG0848	biopolymer transport protein
VIBNI_RS01960	COG2963	transposase activity
VIBNI_RS01965	COG2801	Transposase and inactivated derivatives
VIBNI_RS01970	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
VIBNI_RS01975	COG0826	peptidase U32
VIBNI_RS01985	COG0745	RESPONSE REGULATOR receiver
VIBNI_RS01990	COG5002	protein histidine kinase activity
VIBNI_RS02000	COG0248	Ppx GppA phosphatase
VIBNI_RS02005	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
VIBNI_RS02010	COG0573	inorganic phosphate transmembrane transporter activity
VIBNI_RS02015	COG0581	inorganic phosphate transmembrane transporter activity
VIBNI_RS02020	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
VIBNI_RS02025	COG0704	Plays a role in the regulation of phosphate uptake
VIBNI_RS02045	COG0450	alkyl hydroperoxide reductase
VIBNI_RS02050	COG0583	DNA-binding transcription factor activity
VIBNI_RS02065	COG0517	IMP dehydrogenase activity
VIBNI_RS02085	COG0343	queuine tRNA-ribosyltransferase activity
VIBNI_RS02090	COG1862	Preprotein translocase
VIBNI_RS02095	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
VIBNI_RS02100	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
VIBNI_RS02105	COG0826	peptidase U32
VIBNI_RS02110	COG0826	peptidase U32
VIBNI_RS02120	COG3154	lipid carrier protein
VIBNI_RS02125	COG3153	acetyltransferase
VIBNI_RS02150	COG3959	Transketolase, thiamine diphosphate binding domain
VIBNI_RS02155	COG3958	Transketolase
VIBNI_RS02160	COG2084	Dehydrogenase
VIBNI_RS02165	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
VIBNI_RS02170	COG0583	DNA-binding transcription factor activity
VIBNI_RS02175	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
VIBNI_RS02185	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
VIBNI_RS02200	COG5001	Diguanylate cyclase
VIBNI_RS02200	COG3300	MHYT domain
VIBNI_RS02210	COG0415	Belongs to the DNA photolyase family
VIBNI_RS02220	COG0415	Belongs to the DNA photolyase family
VIBNI_RS02230	COG4771	TonB-dependent receptor
VIBNI_RS02265	COG1461	Dihydroxyacetone kinase
VIBNI_RS02270	COG2376	Dihydroxyacetone kinase
VIBNI_RS02275	COG0698	ribose 5-phosphate isomerase
VIBNI_RS02280	COG1879	ABC-type sugar transport system periplasmic component
VIBNI_RS02285	COG1028	Short-chain dehydrogenase reductase Sdr
VIBNI_RS02290	COG1129	ABC transporter
VIBNI_RS02295	COG1172	Belongs to the binding-protein-dependent transport system permease family
VIBNI_RS02305	COG1129	ABC transporter
VIBNI_RS02310	COG1172	Belongs to the binding-protein-dependent transport system permease family
VIBNI_RS02315	COG1879	ABC-type sugar transport system periplasmic component
VIBNI_RS02320	COG1063	alcohol dehydrogenase
VIBNI_RS02325	COG2390	Transcriptional regulator
VIBNI_RS02330	COG1737	Transcriptional regulator
VIBNI_RS02335	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
VIBNI_RS02340	COG0022	dehydrogenase e1 component
VIBNI_RS02345	COG0508	dehydrogenase complex catalyzes the overall conversion of
VIBNI_RS02355	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
VIBNI_RS02365	COG1129	ABC transporter
VIBNI_RS02375	COG1172	Belongs to the binding-protein-dependent transport system permease family
VIBNI_RS02380	COG1028	Short-chain dehydrogenase reductase Sdr
VIBNI_RS02390	COG1063	alcohol dehydrogenase
VIBNI_RS02400	COG0084	hydrolase, TatD family'
VIBNI_RS02405	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
VIBNI_RS02415	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
VIBNI_RS02420	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
VIBNI_RS02425	COG0813	purine-nucleoside phosphorylase activity
VIBNI_RS02435	COG0560	Phosphoserine phosphatase
VIBNI_RS02445	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
VIBNI_RS02475	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
VIBNI_RS02490	COG0583	DNA-binding transcription factor activity
VIBNI_RS02500	COG0583	DNA-binding transcription factor activity
VIBNI_RS02510	COG1022	Amp-dependent synthetase and ligase
VIBNI_RS02540	COG0583	DNA-binding transcription factor activity
VIBNI_RS02570	COG1929	Belongs to the glycerate kinase type-1 family
VIBNI_RS02580	COG3835	regulator
VIBNI_RS02610	COG2258	MOSC domain
VIBNI_RS02635	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
VIBNI_RS02640	COG2171	N-acyltransferase activity
VIBNI_RS02645	COG3141	response to X-ray
VIBNI_RS02650	COG0583	DNA-binding transcription factor activity
VIBNI_RS02665	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
VIBNI_RS02670	COG1074	ATP-dependent DNA helicase activity
VIBNI_RS02675	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
VIBNI_RS02685	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
VIBNI_RS02685	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
VIBNI_RS02695	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
VIBNI_RS02700	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
VIBNI_RS02705	COG2166	iron-sulfur cluster assembly
VIBNI_RS02710	COG0693	protein deglycase activity
VIBNI_RS02715	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
VIBNI_RS02730	COG1595	DNA-templated transcription, initiation
VIBNI_RS02740	COG2211	Major facilitator Superfamily
VIBNI_RS02745	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
VIBNI_RS02755	COG2813	Specifically methylates the guanine in position
VIBNI_RS02765	COG0271	Belongs to the BolA IbaG family
VIBNI_RS02770	COG1726	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
VIBNI_RS02785	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
VIBNI_RS02790	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
VIBNI_RS02795	COG2871	sodium ion transport
VIBNI_RS02800	COG1477	protein flavinylation
VIBNI_RS02820	COG1360	Flagellar Motor Protein
VIBNI_RS02825	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
VIBNI_RS02850	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
VIBNI_RS02885	COG0463	Glycosyl transferase, family 2
VIBNI_RS02890	COG0514	ATP-dependent DNA helicase (RecQ)
VIBNI_RS02905	COG3325	Belongs to the glycosyl hydrolase 18 family
VIBNI_RS02905	COG3469	chitinase activity
VIBNI_RS02910	COG0733	neurotransmitter:sodium symporter activity
VIBNI_RS02930	COG0442	prolyl-tRNA aminoacylation
VIBNI_RS02935	COG1720	tRNA m6t6A37 methyltransferase activity
VIBNI_RS02950	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
VIBNI_RS02955	COG0351	phosphomethylpyrimidine kinase
VIBNI_RS02955	COG0352	thiamine-phosphate diphosphorylase activity
VIBNI_RS02980	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
VIBNI_RS02995	COG0095	Lipoate-protein ligase
VIBNI_RS03020	COG2867	negative regulation of translational initiation
VIBNI_RS03025	COG2914	Belongs to the UPF0125 (RnfH) family
VIBNI_RS03030	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
VIBNI_RS03055	COG0497	DNA recombination
VIBNI_RS03060	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
VIBNI_RS03065	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
VIBNI_RS03095	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
VIBNI_RS03115	COG0583	DNA-binding transcription factor activity
VIBNI_RS03125	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
VIBNI_RS03130	COG0047	phosphoribosylformylglycinamidine synthase activity
VIBNI_RS03130	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
VIBNI_RS03140	COG2195	Cleaves the N-terminal amino acid of tripeptides
VIBNI_RS03145	COG2252	PERMEase
VIBNI_RS03150	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
VIBNI_RS03155	COG1073	alpha beta
VIBNI_RS03170	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
VIBNI_RS03175	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
VIBNI_RS03180	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
VIBNI_RS03180	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
VIBNI_RS03210	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
VIBNI_RS03220	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
VIBNI_RS03225	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
VIBNI_RS03230	COG0142	geranyltranstransferase activity
VIBNI_RS03235	COG1722	exodeoxyribonuclease VII activity
VIBNI_RS03240	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
VIBNI_RS03250	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
VIBNI_RS03250	COG0301	tRNA thio-modification
VIBNI_RS03255	COG3152	Membrane
VIBNI_RS03265	COG1028	Short-chain dehydrogenase reductase Sdr
VIBNI_RS03270	COG1129	ABC transporter
VIBNI_RS03275	COG1879	ABC-type sugar transport system periplasmic component
VIBNI_RS03280	COG1172	Belongs to the binding-protein-dependent transport system permease family
VIBNI_RS03285	COG1028	Short-chain dehydrogenase reductase Sdr
VIBNI_RS03290	COG3959	Transketolase, thiamine diphosphate binding domain
VIBNI_RS03295	COG3958	Transketolase
VIBNI_RS03300	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
VIBNI_RS03305	COG0583	DNA-binding transcription factor activity
VIBNI_RS03315	COG2363	Small membrane protein
VIBNI_RS03320	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
VIBNI_RS03335	COG1393	Belongs to the ArsC family
VIBNI_RS03340	COG4783	chaperone-mediated protein folding
VIBNI_RS03355	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
VIBNI_RS03365	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
VIBNI_RS03370	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
VIBNI_RS03380	COG1876	peptidase activity
VIBNI_RS03390	COG1393	Belongs to the ArsC family
VIBNI_RS03415	COG2837	iron assimilation
VIBNI_RS03435	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
VIBNI_RS03440	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
VIBNI_RS03445	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
VIBNI_RS03450	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
VIBNI_RS03460	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
VIBNI_RS03465	COG1334	flagellar protein FlaG
VIBNI_RS03470	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
VIBNI_RS03480	COG1516	flagellar protein fliS
VIBNI_RS03500	COG1677	Flagellar hook-basal body complex protein FliE
VIBNI_RS03510	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
VIBNI_RS03535	COG1580	Controls the rotational direction of flagella during chemotaxis
VIBNI_RS03560	COG1987	bacterial-type flagellum assembly
VIBNI_RS03600	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
VIBNI_RS03605	COG0643	Histidine kinase
VIBNI_RS03605	COG0784	Response regulator, receiver
VIBNI_RS03605	COG2198	Histidine kinase
VIBNI_RS03615	COG1192	Involved in chromosome partitioning
VIBNI_RS03625	COG0835	chemotaxis
VIBNI_RS03635	COG4133	protoheme IX ABC transporter activity
VIBNI_RS03640	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
VIBNI_RS03645	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
VIBNI_RS03660	COG1138	Cytochrome C-type biogenesis protein
VIBNI_RS03665	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
VIBNI_RS03670	COG3088	subunit of a heme lyase
VIBNI_RS03670	COG4235	cytochrome complex assembly
VIBNI_RS03675	COG3088	subunit of a heme lyase
VIBNI_RS03675	COG4235	cytochrome complex assembly
VIBNI_RS03680	COG2853	Lipoprotein
VIBNI_RS03685	COG5265	(ABC) transporter
VIBNI_RS03690	COG2067	long-chain fatty acid transport protein
VIBNI_RS03700	COG1595	DNA-templated transcription, initiation
VIBNI_RS03705	COG0183	Belongs to the thiolase family
VIBNI_RS03710	COG1250	3-hydroxyacyl-CoA dehydrogenase
VIBNI_RS03710	COG1024	Enoyl-CoA hydratase
VIBNI_RS03725	COG2062	phosphohistidine phosphatase, SixA
VIBNI_RS03735	COG2890	protein-(glutamine-N5) methyltransferase activity
VIBNI_RS03740	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
VIBNI_RS03745	COG0583	DNA-binding transcription factor activity
VIBNI_RS03750	COG1028	Short-chain dehydrogenase reductase Sdr
VIBNI_RS03755	COG2860	membrane
VIBNI_RS03760	COG3101	peptidyl-lysine hydroxylation
VIBNI_RS03785	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
VIBNI_RS03790	COG0745	RESPONSE REGULATOR receiver
VIBNI_RS03805	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
VIBNI_RS03815	COG1879	ABC-type sugar transport system periplasmic component
VIBNI_RS03820	COG1172	Belongs to the binding-protein-dependent transport system permease family
VIBNI_RS03825	COG1129	ABC transporter
VIBNI_RS03830	COG0673	inositol 2-dehydrogenase activity
VIBNI_RS03835	COG1609	Transcriptional regulator
VIBNI_RS03850	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
VIBNI_RS03855	COG0395	ABC-type sugar transport system, permease component
VIBNI_RS03860	COG1175	transmembrane transport
VIBNI_RS03870	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
VIBNI_RS03875	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
VIBNI_RS03885	COG0101	tRNA pseudouridine synthase activity
VIBNI_RS03895	COG0285	dihydrofolate synthase activity
VIBNI_RS03900	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
VIBNI_RS03905	COG1286	toxin biosynthetic process
VIBNI_RS03910	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
VIBNI_RS03915	COG0583	DNA-binding transcription factor activity
VIBNI_RS03920	COG0745	RESPONSE REGULATOR receiver
VIBNI_RS03930	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
VIBNI_RS03940	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
VIBNI_RS03945	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
VIBNI_RS03970	COG2983	Belongs to the UPF0260 family
VIBNI_RS04005	COG1120	ATPase activity
VIBNI_RS04020	COG2207	Transcriptional regulator
VIBNI_RS04025	COG2226	methyltransferase
VIBNI_RS04040	COG2205	protein histidine kinase activity
VIBNI_RS04045	COG0745	RESPONSE REGULATOR receiver
VIBNI_RS04060	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
VIBNI_RS04070	COG3139	Protein of unknown function (DUF1315)
VIBNI_RS04075	COG0252	asparaginase activity
VIBNI_RS04080	COG0616	signal peptide processing
VIBNI_RS04085	COG0446	pyridine nucleotide-disulphide oxidoreductase
VIBNI_RS04085	COG1902	pentaerythritol trinitrate reductase activity
VIBNI_RS04090	COG0778	Nitroreductase
VIBNI_RS04095	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
VIBNI_RS04100	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
VIBNI_RS04100	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
VIBNI_RS04110	COG1012	belongs to the aldehyde dehydrogenase family
VIBNI_RS04125	COG1473	amidohydrolase
VIBNI_RS04130	COG0583	DNA-binding transcription factor activity
VIBNI_RS04140	COG0123	including yeast histone deacetylase and acetoin utilization protein
VIBNI_RS04155	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
VIBNI_RS04165	COG2258	MOSC domain
VIBNI_RS04210	COG3284	Transcriptional regulator
VIBNI_RS04215	COG3199	ATP-NAD kinase
VIBNI_RS04220	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
VIBNI_RS04225	COG0022	dehydrogenase e1 component
VIBNI_RS04230	COG0596	Alpha beta hydrolase
VIBNI_RS04230	COG0508	dehydrogenase complex catalyzes the overall conversion of
VIBNI_RS04240	COG3083	sulfuric ester hydrolase activity
VIBNI_RS04260	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
VIBNI_RS04270	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
VIBNI_RS04275	COG2095	MarC family integral membrane protein
VIBNI_RS04280	COG1012	belongs to the aldehyde dehydrogenase family
VIBNI_RS04280	COG1454	alcohol dehydrogenase
VIBNI_RS04300	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
VIBNI_RS04305	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
VIBNI_RS04310	COG2056	Na+-H+ antiporter family
VIBNI_RS04315	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
VIBNI_RS04320	COG2885	chlorophyll binding
VIBNI_RS04330	COG0346	lactoylglutathione lyase activity
VIBNI_RS04335	COG0747	negative chemotaxis
VIBNI_RS04340	COG0601	transmembrane transport
VIBNI_RS04345	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
VIBNI_RS04350	COG4172	Belongs to the ABC transporter superfamily
VIBNI_RS04355	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
VIBNI_RS04360	COG4660	Part of a membrane complex involved in electron transport
VIBNI_RS04365	COG4659	FMN binding
VIBNI_RS04370	COG4658	electron transport chain
VIBNI_RS04375	COG4656	Part of a membrane complex involved in electron transport
VIBNI_RS04380	COG2878	Part of a membrane complex involved in electron transport
VIBNI_RS04385	COG4657	Part of a membrane complex involved in electron transport
VIBNI_RS04395	COG0556	nucleotide-excision repair
VIBNI_RS04400	COG2204	response regulator
VIBNI_RS04405	COG2198	Histidine kinase
VIBNI_RS04410	COG0391	Required for morphogenesis under gluconeogenic growth conditions
VIBNI_RS04420	COG0521	Mo-molybdopterin cofactor biosynthetic process
VIBNI_RS04430	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
VIBNI_RS04435	COG0314	molybdopterin synthase activity
VIBNI_RS04450	COG0601	transmembrane transport
VIBNI_RS04455	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
VIBNI_RS04460	COG0444	Belongs to the ABC transporter superfamily
VIBNI_RS04475	COG0435	Glutathione S-transferase
VIBNI_RS04505	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
VIBNI_RS04520	COG1522	sequence-specific DNA binding
VIBNI_RS04530	COG1946	Acyl-CoA thioesterase
VIBNI_RS04535	COG3126	Type III secretion system lipoprotein chaperone (YscW)
VIBNI_RS04550	COG2199	diguanylate cyclase activity
VIBNI_RS04555	COG0840	transmembrane signaling receptor activity
VIBNI_RS04565	COG1024	Enoyl-CoA hydratase
VIBNI_RS04570	COG1024	Enoyl-CoA hydratase
VIBNI_RS04575	COG1960	acyl-CoA dehydrogenase activity
VIBNI_RS04590	COG4191	Histidine kinase
VIBNI_RS04595	COG4566	intracellular signal transduction
VIBNI_RS04615	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
VIBNI_RS04620	COG0473	3-isopropylmalate dehydrogenase activity
VIBNI_RS04635	COG4608	Belongs to the ABC transporter superfamily
VIBNI_RS04645	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
VIBNI_RS04655	COG0747	negative chemotaxis
VIBNI_RS04660	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
VIBNI_RS04670	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
VIBNI_RS04695	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
VIBNI_RS04700	COG3716	PTS system mannose fructose sorbose family IID component
VIBNI_RS04705	COG3715	PTS system
VIBNI_RS04710	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
VIBNI_RS04715	COG2222	sugar isomerase
VIBNI_RS04725	COG1349	DNA-binding transcription factor activity
VIBNI_RS04730	COG1349	DNA-binding transcription factor activity
VIBNI_RS04750	COG1309	transcriptional regulator
VIBNI_RS04805	COG1120	ATPase activity
VIBNI_RS04810	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
VIBNI_RS04835	COG1999	signal sequence binding
VIBNI_RS04840	COG0109	protoheme IX farnesyltransferase activity
VIBNI_RS04845	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
VIBNI_RS04850	COG1845	cytochrome c oxidase, subunit III
VIBNI_RS04855	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
VIBNI_RS04865	COG0583	DNA-binding transcription factor activity
VIBNI_RS04870	COG3321	synthase
VIBNI_RS04870	COG0604	alcohol dehydrogenase
VIBNI_RS04900	COG3474	cytochrome
VIBNI_RS04920	COG0438	transferase activity, transferring glycosyl groups
VIBNI_RS04970	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
VIBNI_RS04980	COG2358	TRAP transporter, solute receptor (TAXI family
VIBNI_RS04990	COG0784	Response regulator, receiver
VIBNI_RS04990	COG2205	protein histidine kinase activity
VIBNI_RS05000	COG1744	ABC transporter substrate-binding protein PnrA-like
VIBNI_RS05005	COG3845	ABC transporter
VIBNI_RS05010	COG4603	Belongs to the binding-protein-dependent transport system permease family
VIBNI_RS05015	COG1079	Belongs to the binding-protein-dependent transport system permease family
VIBNI_RS05030	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
VIBNI_RS05040	COG0745	RESPONSE REGULATOR receiver
VIBNI_RS05045	COG0642	Histidine kinase
VIBNI_RS05055	COG0784	Response regulator, receiver
VIBNI_RS05055	COG0835	chemotaxis
VIBNI_RS05065	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
VIBNI_RS05065	COG0617	tRNA 3'-terminal CCA addition
VIBNI_RS05065	COG0517	IMP dehydrogenase activity
VIBNI_RS05075	COG0471	metal ion transport
VIBNI_RS05080	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
VIBNI_RS05080	COG4191	Histidine kinase
VIBNI_RS05095	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
VIBNI_RS05105	COG0840	transmembrane signaling receptor activity
VIBNI_RS05110	COG0537	adenosine 5'-monophosphoramidase activity
VIBNI_RS05135	COG3150	esterase
VIBNI_RS05140	COG2165	general secretion pathway protein
VIBNI_RS05145	COG1252	NADH dehydrogenase
VIBNI_RS05160	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
VIBNI_RS05170	COG4591	ABC-type transport system involved in lipoprotein release permease component
VIBNI_RS05175	COG1136	(ABC) transporter
VIBNI_RS05180	COG4591	ABC-type transport system involved in lipoprotein release permease component
VIBNI_RS05190	COG0658	competence protein
VIBNI_RS05190	COG2333	competence protein COMEC
VIBNI_RS05195	COG1132	(ABC) transporter
VIBNI_RS05200	COG1663	tetraacyldisaccharide 4'-kinase activity
VIBNI_RS05205	COG2835	tetraacyldisaccharide 4'-kinase activity
VIBNI_RS05210	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
VIBNI_RS05220	COG0463	Glycosyl transferase, family 2
VIBNI_RS05235	COG2719	SpoVR family
VIBNI_RS05240	COG2718	Belongs to the UPF0229 family
VIBNI_RS05245	COG2766	serine protein kinase
VIBNI_RS05250	COG3013	Belongs to the UPF0304 family
VIBNI_RS05260	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
VIBNI_RS05275	COG1882	Formate acetyltransferase
VIBNI_RS05320	COG1309	transcriptional regulator
VIBNI_RS05325	COG1960	acyl-CoA dehydrogenase activity
VIBNI_RS05330	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
VIBNI_RS05340	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
VIBNI_RS05345	COG1454	alcohol dehydrogenase
VIBNI_RS05350	COG1737	Transcriptional regulator
VIBNI_RS05355	COG0076	glutamate decarboxylase activity
VIBNI_RS05370	COG3070	regulator of competence-specific genes
VIBNI_RS05375	COG0601	transmembrane transport
VIBNI_RS05380	COG4239	(ABC) transporter, permease
VIBNI_RS05385	COG4166	transmembrane transport
VIBNI_RS05390	COG0444	Belongs to the ABC transporter superfamily
VIBNI_RS05395	COG4608	Belongs to the ABC transporter superfamily
VIBNI_RS05415	COG2204	response regulator
VIBNI_RS05430	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
VIBNI_RS05460	COG1879	ABC-type sugar transport system periplasmic component
VIBNI_RS05465	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
VIBNI_RS05470	COG4988	ABC transporter
VIBNI_RS05475	COG0492	ferredoxin-NADP+ reductase activity
VIBNI_RS05490	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
VIBNI_RS05505	COG2949	membrane
VIBNI_RS05515	COG0281	malic enzyme
VIBNI_RS05520	COG1643	Atp-dependent helicase
VIBNI_RS05530	COG1028	Short-chain dehydrogenase reductase Sdr
VIBNI_RS05535	COG0454	-acetyltransferase
VIBNI_RS05545	COG1028	Short-chain dehydrogenase reductase Sdr
VIBNI_RS05580	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
VIBNI_RS05585	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
VIBNI_RS05590	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
VIBNI_RS05625	COG0247	lactate metabolic process
VIBNI_RS05625	COG0277	FAD linked oxidase domain protein
VIBNI_RS05645	COG3706	GGDEF domain
VIBNI_RS05655	COG2986	histidine ammonia-lyase
VIBNI_RS05665	COG0010	Belongs to the arginase family
VIBNI_RS05670	COG1228	amidohydrolase
VIBNI_RS05675	COG2188	Transcriptional regulator
VIBNI_RS05680	COG1653	transport
VIBNI_RS05685	COG1175	transmembrane transport
VIBNI_RS05690	COG0395	ABC-type sugar transport system, permease component
VIBNI_RS05695	COG0366	Alpha amylase catalytic
VIBNI_RS05700	COG3842	ATPase activity
VIBNI_RS05705	COG1609	Transcriptional regulator
VIBNI_RS05715	COG1280	lysine exporter protein (LysE YggA)
VIBNI_RS05745	COG1312	Catalyzes the dehydration of D-mannonate
VIBNI_RS05755	COG0363	glucosamine-6-phosphate deaminase activity
VIBNI_RS05760	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
VIBNI_RS05765	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
VIBNI_RS05790	COG1028	Short-chain dehydrogenase reductase Sdr
VIBNI_RS05795	COG0179	Fumarylacetoacetate (FAA) hydrolase
VIBNI_RS05815	COG0488	(ABC) transporter
VIBNI_RS05820	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
VIBNI_RS05825	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
VIBNI_RS05875	COG2086	electron transfer activity
VIBNI_RS05880	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
VIBNI_RS05885	COG2181	nitrate reductase activity
VIBNI_RS05885	COG0247	lactate metabolic process
VIBNI_RS05890	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
VIBNI_RS05920	COG0183	Belongs to the thiolase family
VIBNI_RS05935	COG0673	inositol 2-dehydrogenase activity
VIBNI_RS05965	COG1175	transmembrane transport
VIBNI_RS05970	COG0395	ABC-type sugar transport system, permease component
VIBNI_RS05975	COG3842	ATPase activity
VIBNI_RS05980	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
VIBNI_RS05990	COG2721	sulfolactate sulfo-lyase activity
VIBNI_RS06000	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
VIBNI_RS06010	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
VIBNI_RS06015	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
VIBNI_RS06065	COG0596	Alpha beta hydrolase
VIBNI_RS06065	COG0508	dehydrogenase complex catalyzes the overall conversion of
VIBNI_RS06080	COG1301	dicarboxylic acid transport
VIBNI_RS06085	COG0159	tryptophan synthase activity
VIBNI_RS06090	COG0133	tryptophan synthase activity
VIBNI_RS06095	COG0134	indole-3-glycerol-phosphate synthase activity
VIBNI_RS06095	COG0135	phosphoribosylanthranilate isomerase activity
VIBNI_RS06100	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
VIBNI_RS06105	COG0512	Glutamine amidotransferase of anthranilate synthase
VIBNI_RS06110	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
VIBNI_RS06115	COG0613	PHP domain protein
VIBNI_RS06120	COG0009	L-threonylcarbamoyladenylate synthase
VIBNI_RS06140	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
VIBNI_RS06145	COG2186	Transcriptional regulator
VIBNI_RS06150	COG1028	Short-chain dehydrogenase reductase Sdr
VIBNI_RS06160	COG0129	dihydroxy-acid dehydratase activity
VIBNI_RS06165	COG3842	ATPase activity
VIBNI_RS06175	COG1175	transmembrane transport
VIBNI_RS06195	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
VIBNI_RS06205	COG4969	Belongs to the N-Me-Phe pilin family
VIBNI_RS06210	COG3300	MHYT domain
VIBNI_RS06210	COG5001	Diguanylate cyclase
VIBNI_RS06215	COG1760	l-serine dehydratase
VIBNI_RS06225	COG0189	ligase activity
VIBNI_RS06230	COG4067	protein conserved in archaea
VIBNI_RS06230	COG0189	ligase activity
VIBNI_RS06240	COG0417	DNA replication proofreading
VIBNI_RS06245	COG2197	response regulator
VIBNI_RS06250	COG0322	excinuclease ABC activity
VIBNI_RS06260	COG2199	diguanylate cyclase activity
VIBNI_RS06290	COG1434	Gram-negative-bacterium-type cell wall biogenesis
VIBNI_RS06305	COG2116	formate transmembrane transporter activity
VIBNI_RS06345	COG2205	protein histidine kinase activity
VIBNI_RS06345	COG2202	Pas domain
VIBNI_RS06350	COG0390	transport system, permease component
VIBNI_RS06360	COG4459	periplasmic nitrate reductase
VIBNI_RS06365	COG3005	denitrification pathway
VIBNI_RS06370	COG0243	molybdopterin cofactor binding
VIBNI_RS06380	COG0167	dihydroorotate dehydrogenase activity
VIBNI_RS06385	COG1227	inorganic diphosphatase activity
VIBNI_RS06400	COG0840	transmembrane signaling receptor activity
VIBNI_RS06405	COG2963	transposase activity
VIBNI_RS06410	COG2801	Transposase and inactivated derivatives
VIBNI_RS06415	COG2190	(PTS) system
VIBNI_RS06415	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
VIBNI_RS06415	COG1263	PTS System
VIBNI_RS06425	COG0745	RESPONSE REGULATOR receiver
VIBNI_RS06430	COG0519	Catalyzes the synthesis of GMP from XMP
VIBNI_RS06440	COG1012	belongs to the aldehyde dehydrogenase family
VIBNI_RS06480	COG4172	Belongs to the ABC transporter superfamily
VIBNI_RS06490	COG4171	peptide transport system, permease
VIBNI_RS06495	COG4168	peptide transport system, permease
VIBNI_RS06505	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
VIBNI_RS06510	COG1842	Phage shock protein A
VIBNI_RS06540	COG2818	Glycosylase
VIBNI_RS06545	COG0626	cystathionine gamma-synthase activity
VIBNI_RS06555	COG0733	neurotransmitter:sodium symporter activity
VIBNI_RS06565	COG0564	pseudouridine synthase activity
VIBNI_RS06570	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
VIBNI_RS06570	COG0116	Belongs to the methyltransferase superfamily
VIBNI_RS06590	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
VIBNI_RS06595	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
VIBNI_RS06600	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
VIBNI_RS06605	COG1116	anion transmembrane transporter activity
VIBNI_RS06610	COG0351	phosphomethylpyrimidine kinase
VIBNI_RS06620	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
VIBNI_RS06640	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
VIBNI_RS06645	COG4136	ATPase activity
VIBNI_RS06650	COG4135	transport system, permease component
VIBNI_RS06655	COG4134	Bacterial extracellular solute-binding protein
VIBNI_RS06670	COG2350	Protein conserved in bacteria
VIBNI_RS06685	COG1607	acyl-coa hydrolase
VIBNI_RS06690	COG2133	pyrroloquinoline quinone binding
VIBNI_RS06720	COG0072	phenylalanine-tRNA ligase activity
VIBNI_RS06720	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
VIBNI_RS06730	COG0577	efflux transmembrane transporter activity
VIBNI_RS06740	COG1136	(ABC) transporter
VIBNI_RS06740	COG0577	efflux transmembrane transporter activity
VIBNI_RS06750	COG0776	regulation of translation
VIBNI_RS06765	COG0500	methyltransferase
VIBNI_RS06770	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
VIBNI_RS06780	COG1346	cytolysis
VIBNI_RS06785	COG1380	Effector of murein hydrolase LrgA
VIBNI_RS06790	COG2925	Exonuclease
VIBNI_RS06795	COG1309	transcriptional regulator
VIBNI_RS06810	COG2010	Cytochrome c
VIBNI_RS06820	COG3706	GGDEF domain
VIBNI_RS06825	COG0515	serine threonine protein kinase
VIBNI_RS06825	COG2815	serine threonine protein kinase
VIBNI_RS06860	COG0631	protein serine/threonine phosphatase activity
VIBNI_RS06945	COG2801	Transposase and inactivated derivatives
VIBNI_RS06950	COG1263	PTS System
VIBNI_RS06950	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
VIBNI_RS06960	COG2963	transposase activity
VIBNI_RS06965	COG2801	Transposase and inactivated derivatives
VIBNI_RS06970	COG1263	PTS System
VIBNI_RS06970	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
VIBNI_RS07005	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
VIBNI_RS07010	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
VIBNI_RS07020	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
VIBNI_RS07025	COG1823	symporter activity
VIBNI_RS07030	COG0702	epimerase
VIBNI_RS07035	COG1280	lysine exporter protein (LysE YggA)
VIBNI_RS07040	COG0840	transmembrane signaling receptor activity
VIBNI_RS07045	COG5002	protein histidine kinase activity
VIBNI_RS07045	COG2205	protein histidine kinase activity
VIBNI_RS07045	COG0784	Response regulator, receiver
VIBNI_RS07050	COG0745	RESPONSE REGULATOR receiver
VIBNI_RS07055	COG4943	cyclic-guanylate-specific phosphodiesterase activity
VIBNI_RS07060	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
VIBNI_RS07070	COG0438	transferase activity, transferring glycosyl groups
VIBNI_RS07085	COG0110	maltose O-acetyltransferase activity
VIBNI_RS07105	COG2204	response regulator
VIBNI_RS07110	COG4999	Histidine kinase
VIBNI_RS07110	COG3850	Histidine kinase
VIBNI_RS07110	COG2205	protein histidine kinase activity
VIBNI_RS07110	COG3437	response regulator, receiver
VIBNI_RS07115	COG0745	RESPONSE REGULATOR receiver
VIBNI_RS07120	COG0489	protein tyrosine kinase activity
VIBNI_RS07130	COG2885	chlorophyll binding
VIBNI_RS07130	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
VIBNI_RS07145	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
VIBNI_RS07150	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
VIBNI_RS07175	COG1172	Belongs to the binding-protein-dependent transport system permease family
VIBNI_RS07180	COG1129	ABC transporter
VIBNI_RS07195	COG1737	Transcriptional regulator
VIBNI_RS07205	COG1070	Carbohydrate kinase
VIBNI_RS07220	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
VIBNI_RS07225	COG1028	Short-chain dehydrogenase reductase Sdr
VIBNI_RS07235	COG2988	succinylglutamate desuccinylase activity
VIBNI_RS07240	COG4139	cobalamin transport
VIBNI_RS07245	COG4138	Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system
VIBNI_RS07265	COG0513	Belongs to the DEAD box helicase family
VIBNI_RS07275	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
VIBNI_RS07365	COG1879	ABC-type sugar transport system periplasmic component
VIBNI_RS07370	COG1129	ABC transporter
VIBNI_RS07375	COG1172	Belongs to the binding-protein-dependent transport system permease family
VIBNI_RS07380	COG2186	Transcriptional regulator
VIBNI_RS07395	COG4689	acetoacetate decarboxylase
VIBNI_RS07400	COG3254	rhamnose metabolic process
VIBNI_RS07405	COG4221	oxidoreductase activity
VIBNI_RS07415	COG4948	Mandelate Racemase Muconate Lactonizing
VIBNI_RS07430	COG0513	Belongs to the DEAD box helicase family
VIBNI_RS07445	COG0583	DNA-binding transcription factor activity
VIBNI_RS07455	COG1366	Belongs to the anti-sigma-factor antagonist family
VIBNI_RS07465	COG2172	sigma factor antagonist activity
VIBNI_RS07480	COG3437	response regulator, receiver
VIBNI_RS07495	COG1451	nucleotide metabolic process
VIBNI_RS07515	COG0840	transmembrane signaling receptor activity
VIBNI_RS07525	COG5001	Diguanylate cyclase
VIBNI_RS07525	COG3300	MHYT domain
VIBNI_RS07595	COG2195	Cleaves the N-terminal amino acid of tripeptides
VIBNI_RS07610	COG3706	GGDEF domain
VIBNI_RS07615	COG2200	EAL domain
VIBNI_RS07645	COG5377	YqaJ viral recombinase family
VIBNI_RS07895	COG0534	Mate efflux family protein
VIBNI_RS07900	COG0307	riboflavin synthase, alpha
VIBNI_RS07910	COG3001	Fructosamine kinase
VIBNI_RS07920	COG3706	GGDEF domain
VIBNI_RS07930	COG0791	NLP P60 protein
VIBNI_RS07935	COG0840	transmembrane signaling receptor activity
VIBNI_RS07945	COG3148	PFAM DTW domain containing protein
VIBNI_RS07950	COG1940	carbohydrate kinase activity
VIBNI_RS07965	COG0746	molybdenum cofactor guanylyltransferase activity
VIBNI_RS07970	COG1122	ATPase activity
VIBNI_RS07975	COG4662	Binding-protein-dependent transport system inner membrane component
VIBNI_RS07985	COG2204	response regulator
VIBNI_RS07990	COG3852	Histidine kinase
VIBNI_RS07995	COG0488	(ABC) transporter
VIBNI_RS08005	COG1175	transmembrane transport
VIBNI_RS08010	COG0395	ABC-type sugar transport system, permease component
VIBNI_RS08015	COG3842	ATPase activity
VIBNI_RS08020	COG0246	Mannitol dehydrogenase
VIBNI_RS08035	COG1070	Carbohydrate kinase
VIBNI_RS08045	COG3152	Membrane
VIBNI_RS08050	COG2207	Transcriptional regulator
VIBNI_RS08050	COG3708	Transcriptional regulator
VIBNI_RS08065	COG1742	UPF0060 membrane protein
VIBNI_RS08135	COG0840	transmembrane signaling receptor activity
VIBNI_RS08140	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
VIBNI_RS08170	COG0243	molybdopterin cofactor binding
VIBNI_RS08170	COG3383	formate dehydrogenase (NAD+) activity
VIBNI_RS08175	COG0437	4 iron, 4 sulfur cluster binding
VIBNI_RS08190	COG5002	protein histidine kinase activity
VIBNI_RS08200	COG0004	ammonium transporteR
VIBNI_RS08205	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
VIBNI_RS08215	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
VIBNI_RS08220	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
VIBNI_RS08225	COG1177	transmembrane transport
VIBNI_RS08235	COG3842	ATPase activity
VIBNI_RS08260	COG1486	melibiose metabolic process
VIBNI_RS08265	COG0037	tRNA processing
VIBNI_RS08270	COG0589	response to stress
VIBNI_RS08275	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
VIBNI_RS08290	COG2217	Heavy metal translocating P-type atpase
VIBNI_RS08300	COG2010	Cytochrome c
VIBNI_RS08315	COG3278	Belongs to the heme-copper respiratory oxidase family
VIBNI_RS08330	COG2205	protein histidine kinase activity
VIBNI_RS08330	COG0784	Response regulator, receiver
VIBNI_RS08355	COG3734	2-keto-3-deoxy-galactonokinase
VIBNI_RS08360	COG0800	Aldolase
VIBNI_RS08365	COG4948	Mandelate Racemase Muconate Lactonizing
VIBNI_RS08380	COG1028	Short-chain dehydrogenase reductase Sdr
VIBNI_RS08390	COG1129	ABC transporter
VIBNI_RS08395	COG1172	Belongs to the binding-protein-dependent transport system permease family
VIBNI_RS08400	COG1024	Enoyl-CoA hydratase
VIBNI_RS08405	COG1804	L-carnitine dehydratase bile acid-inducible protein F
VIBNI_RS08410	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
VIBNI_RS08425	COG3386	PFAM SMP-30 Gluconolaconase
VIBNI_RS08435	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
VIBNI_RS08450	COG3120	sequence-specific DNA binding
VIBNI_RS08455	COG1067	ATP-dependent peptidase activity
VIBNI_RS08475	COG0488	(ABC) transporter
VIBNI_RS08485	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
VIBNI_RS08485	COG0116	Belongs to the methyltransferase superfamily
VIBNI_RS08495	COG0167	dihydroorotate dehydrogenase activity
VIBNI_RS08500	COG2902	Dehydrogenase
VIBNI_RS08505	COG0308	aminopeptidase N
VIBNI_RS08520	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
VIBNI_RS08525	COG1956	GAF domain-containing protein
VIBNI_RS08530	COG1132	(ABC) transporter
VIBNI_RS08535	COG2995	paraquat-inducible protein a
VIBNI_RS08540	COG3008	intermembrane lipid transfer
VIBNI_RS08545	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
VIBNI_RS08545	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
VIBNI_RS08565	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
VIBNI_RS08570	COG1666	GTP binding
VIBNI_RS08580	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
VIBNI_RS08585	COG4597	amino acid ABC transporter
VIBNI_RS08590	COG0765	amino acid transport
VIBNI_RS08595	COG1126	abc transporter atp-binding protein
VIBNI_RS08600	COG0670	Belongs to the BI1 family
VIBNI_RS08605	COG2920	part of a sulfur-relay system
VIBNI_RS08610	COG1254	Belongs to the acylphosphatase family
VIBNI_RS08625	COG2801	Transposase and inactivated derivatives
VIBNI_RS08630	COG2963	transposase activity
VIBNI_RS08660	COG3706	GGDEF domain
VIBNI_RS08670	COG0602	queuosine metabolic process
VIBNI_RS08690	COG2079	MmgE PrpD family protein
VIBNI_RS08695	COG0372	Belongs to the citrate synthase family
VIBNI_RS08700	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
VIBNI_RS08725	COG3541	Predicted nucleotidyltransferase
VIBNI_RS08740	COG1690	Belongs to the RtcB family
VIBNI_RS08755	COG4650	regulator
VIBNI_RS08770	COG4565	transcriptional regulatory protein
VIBNI_RS08775	COG3290	protein histidine kinase activity
VIBNI_RS08785	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
VIBNI_RS08805	COG1028	Short-chain dehydrogenase reductase Sdr
VIBNI_RS08820	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
VIBNI_RS08840	COG1115	amino acid carrier protein
VIBNI_RS08850	COG1280	lysine exporter protein (LysE YggA)
VIBNI_RS08865	COG4753	response regulator
VIBNI_RS08865	COG2207	Transcriptional regulator
VIBNI_RS08870	COG4821	SIS domain
VIBNI_RS08880	COG3142	Participates in the control of copper homeostasis
VIBNI_RS08895	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
VIBNI_RS08915	COG0277	FAD linked oxidase domain protein
VIBNI_RS08920	COG3622	Belongs to the hyi family
VIBNI_RS08925	COG5001	Diguanylate cyclase
VIBNI_RS08925	COG3300	MHYT domain
VIBNI_RS08940	COG3321	synthase
VIBNI_RS08940	COG0318	PFAM AMP-dependent synthetase and ligase
VIBNI_RS08940	COG0300	oxidoreductase activity
VIBNI_RS08940	COG1028	Short-chain dehydrogenase reductase Sdr
VIBNI_RS08940	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
VIBNI_RS08980	COG1643	Atp-dependent helicase
VIBNI_RS08985	COG0463	Glycosyl transferase, family 2
VIBNI_RS08995	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
VIBNI_RS09005	COG0561	phosphatase activity
VIBNI_RS09010	COG0235	Class ii aldolase
VIBNI_RS09015	COG3623	hexulose-6-phosphate isomerase
VIBNI_RS09025	COG1070	Carbohydrate kinase
VIBNI_RS09030	COG2706	6-phosphogluconolactonase activity
VIBNI_RS09035	COG0395	ABC-type sugar transport system, permease component
VIBNI_RS09050	COG3842	ATPase activity
VIBNI_RS09120	COG4964	Belongs to the GSP D family
VIBNI_RS09135	COG0583	DNA-binding transcription factor activity
VIBNI_RS09155	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
VIBNI_RS09160	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
VIBNI_RS09160	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
VIBNI_RS09165	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
VIBNI_RS09170	COG1028	Short-chain dehydrogenase reductase Sdr
VIBNI_RS09175	COG1063	alcohol dehydrogenase
VIBNI_RS09180	COG2188	Transcriptional regulator
VIBNI_RS09190	COG2721	sulfolactate sulfo-lyase activity
VIBNI_RS09235	COG2267	carboxylic ester hydrolase activity
VIBNI_RS09255	COG2304	oxidoreductase activity
VIBNI_RS09270	COG3706	GGDEF domain
VIBNI_RS09280	COG0443	Heat shock 70 kDa protein
VIBNI_RS09285	COG0443	Heat shock 70 kDa protein
VIBNI_RS09295	COG0393	Putative heavy-metal-binding
VIBNI_RS09325	COG1028	Short-chain dehydrogenase reductase Sdr
VIBNI_RS09335	COG0431	NADPH-dependent FMN reductase
VIBNI_RS09340	COG1454	alcohol dehydrogenase
VIBNI_RS09370	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
VIBNI_RS09380	COG3768	UPF0283 membrane protein
VIBNI_RS09385	COG3106	COG3106 Predicted ATPase
VIBNI_RS09405	COG0784	Response regulator, receiver
VIBNI_RS09405	COG2205	protein histidine kinase activity
VIBNI_RS09415	COG0494	nUDIX hydrolase
VIBNI_RS09420	COG0814	amino acid
VIBNI_RS09425	COG1760	l-serine dehydratase
VIBNI_RS09470	COG1714	RDD family
VIBNI_RS09500	COG0840	transmembrane signaling receptor activity
VIBNI_RS09505	COG0017	Asparaginyl-tRNA synthetase
VIBNI_RS09510	COG2770	Histidine kinase
VIBNI_RS09510	COG3437	response regulator, receiver
VIBNI_RS09515	COG1448	Aminotransferase
VIBNI_RS09525	COG2176	DNA-directed DNA polymerase activity
VIBNI_RS09530	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
VIBNI_RS09535	COG1846	Transcriptional regulator
VIBNI_RS09550	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
VIBNI_RS09570	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
VIBNI_RS09615	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
VIBNI_RS09630	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
VIBNI_RS09635	COG3108	Peptidase M15
VIBNI_RS09640	COG2989	Protein conserved in bacteria
VIBNI_RS09665	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
VIBNI_RS09675	COG5002	protein histidine kinase activity
VIBNI_RS09675	COG2205	protein histidine kinase activity
VIBNI_RS09675	COG0784	Response regulator, receiver
VIBNI_RS09685	COG5001	Diguanylate cyclase
VIBNI_RS09685	COG4251	negative regulation of phosphorylation
VIBNI_RS09685	COG3706	GGDEF domain
VIBNI_RS09685	COG2203	Gaf domain
VIBNI_RS09690	COG0840	transmembrane signaling receptor activity
VIBNI_RS09715	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
VIBNI_RS09720	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
VIBNI_RS09785	COG1172	Belongs to the binding-protein-dependent transport system permease family
VIBNI_RS09795	COG1609	Transcriptional regulator
VIBNI_RS09800	COG0019	diaminopimelate decarboxylase activity
VIBNI_RS09820	COG0784	Response regulator, receiver
VIBNI_RS09820	COG0643	Histidine kinase
VIBNI_RS09820	COG2198	Histidine kinase
VIBNI_RS09840	COG0456	acetyltransferase
VIBNI_RS09865	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
VIBNI_RS09870	COG0291	Belongs to the bacterial ribosomal protein bL35 family
VIBNI_RS09880	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
VIBNI_RS09885	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
VIBNI_RS09890	COG1858	cytochrome C peroxidase
VIBNI_RS09895	COG2205	protein histidine kinase activity
VIBNI_RS09895	COG0784	Response regulator, receiver
VIBNI_RS09910	COG1160	GTP binding
VIBNI_RS09955	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
VIBNI_RS09960	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
VIBNI_RS09970	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
VIBNI_RS09975	COG1434	Gram-negative-bacterium-type cell wall biogenesis
VIBNI_RS09980	COG0745	RESPONSE REGULATOR receiver
VIBNI_RS09990	COG1609	Transcriptional regulator
VIBNI_RS09995	COG3070	regulator of competence-specific genes
VIBNI_RS10005	COG0596	Alpha beta hydrolase
VIBNI_RS10010	COG0297	glycogen (starch) synthase activity
VIBNI_RS10015	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
VIBNI_RS10025	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
VIBNI_RS10035	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
VIBNI_RS10045	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
VIBNI_RS10050	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
VIBNI_RS10055	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
VIBNI_RS10065	COG0542	response to heat
VIBNI_RS10070	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
VIBNI_RS10075	COG1278	Cold shock
VIBNI_RS10095	COG2915	High frequency lysogenization protein hflD homolog
VIBNI_RS10100	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
VIBNI_RS10105	COG0840	transmembrane signaling receptor activity
VIBNI_RS10110	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
VIBNI_RS10115	COG0463	Glycosyl transferase, family 2
VIBNI_RS10120	COG2850	peptidyl-arginine hydroxylation
VIBNI_RS10125	COG0840	transmembrane signaling receptor activity
VIBNI_RS10130	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
VIBNI_RS10175	COG1609	Transcriptional regulator
VIBNI_RS10190	COG1172	Belongs to the binding-protein-dependent transport system permease family
VIBNI_RS10195	COG1082	Xylose isomerase domain protein TIM barrel
VIBNI_RS10200	COG3962	Belongs to the TPP enzyme family
VIBNI_RS10205	COG0673	inositol 2-dehydrogenase activity
VIBNI_RS10210	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
VIBNI_RS10220	COG0191	fructose-bisphosphate aldolase activity
VIBNI_RS10225	COG0673	inositol 2-dehydrogenase activity
VIBNI_RS10245	COG1122	ATPase activity
VIBNI_RS10250	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
VIBNI_RS10255	COG1268	BioY protein
VIBNI_RS10270	COG1737	Transcriptional regulator
VIBNI_RS10275	COG0673	inositol 2-dehydrogenase activity
VIBNI_RS10280	COG3718	enzyme involved in inositol metabolism
VIBNI_RS10295	COG0697	spore germination
VIBNI_RS10325	COG3040	lipid binding
VIBNI_RS10345	COG1028	Short-chain dehydrogenase reductase Sdr
VIBNI_RS10375	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
VIBNI_RS10385	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
VIBNI_RS10405	COG0708	Exodeoxyribonuclease III
VIBNI_RS10425	COG4181	ATPase activity
VIBNI_RS10430	COG0534	Mate efflux family protein
VIBNI_RS10435	COG0702	epimerase
VIBNI_RS10445	COG2814	Major facilitator Superfamily
VIBNI_RS10455	COG1061	Type III restriction enzyme res subunit
VIBNI_RS10465	COG0583	DNA-binding transcription factor activity
VIBNI_RS10500	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
VIBNI_RS10510	COG3313	Fe-S protein
VIBNI_RS10520	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
VIBNI_RS10525	COG0583	DNA-binding transcription factor activity
VIBNI_RS10540	COG5001	Diguanylate cyclase
VIBNI_RS10555	COG2205	protein histidine kinase activity
VIBNI_RS10555	COG0784	Response regulator, receiver
VIBNI_RS10560	COG1032	radical SAM domain protein
VIBNI_RS10570	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
VIBNI_RS10585	COG1104	cysteine desulfurase activity
VIBNI_RS10605	COG0556	nucleotide-excision repair
VIBNI_RS10645	COG5002	protein histidine kinase activity
VIBNI_RS10645	COG0784	Response regulator, receiver
VIBNI_RS10655	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
VIBNI_RS10660	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
VIBNI_RS10665	COG2885	chlorophyll binding
VIBNI_RS10670	COG0823	Involved in the tonB-independent uptake of proteins
VIBNI_RS10685	COG0811	peptide transport
VIBNI_RS10690	COG0824	Thioesterase
VIBNI_RS10700	COG1294	oxidase, subunit
VIBNI_RS10705	COG1271	oxidase subunit
VIBNI_RS10715	COG0632	four-way junction helicase activity
VIBNI_RS10720	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
VIBNI_RS10725	COG0217	transcriptional regulatory protein
VIBNI_RS10740	COG4106	trans-aconitate 2-methyltransferase activity
VIBNI_RS10750	COG0189	ligase activity
VIBNI_RS10750	COG4067	protein conserved in archaea
VIBNI_RS10765	COG1435	thymidine kinase activity
VIBNI_RS10770	COG0215	cysteine-tRNA ligase activity
VIBNI_RS10775	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
VIBNI_RS10780	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
VIBNI_RS10785	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
VIBNI_RS10790	COG3012	SEC-C Motif Domain Protein
VIBNI_RS10795	COG0140	phosphoribosyl-ATP diphosphatase activity
VIBNI_RS10795	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
VIBNI_RS10805	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
VIBNI_RS10810	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
VIBNI_RS10815	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
VIBNI_RS10815	COG0131	Imidazoleglycerol-phosphate dehydratase
VIBNI_RS10820	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
VIBNI_RS10835	COG1757	Na H antiporter
VIBNI_RS10855	COG0587	DNA-directed DNA polymerase activity
VIBNI_RS10865	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
VIBNI_RS10870	COG1199	ATP-dependent helicase activity
VIBNI_RS10875	COG0730	response to heat
VIBNI_RS10880	COG3923	Primosomal replication protein n
VIBNI_RS10905	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
VIBNI_RS10930	COG0501	Belongs to the peptidase M48B family
VIBNI_RS10935	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
VIBNI_RS10940	COG1073	alpha beta
VIBNI_RS10940	COG2226	methyltransferase
VIBNI_RS10945	COG0156	8-amino-7-oxononanoate synthase activity
VIBNI_RS10955	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
VIBNI_RS10965	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
VIBNI_RS10970	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
VIBNI_RS10985	COG0686	Belongs to the AlaDH PNT family
VIBNI_RS10995	COG0583	DNA-binding transcription factor activity
VIBNI_RS11015	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
VIBNI_RS11020	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
VIBNI_RS11030	COG0539	negative regulation of cytoplasmic translation
VIBNI_RS11040	COG0616	signal peptide processing
VIBNI_RS11045	COG1028	Short-chain dehydrogenase reductase Sdr
VIBNI_RS11050	COG0784	Response regulator, receiver
VIBNI_RS11050	COG0835	chemotaxis
VIBNI_RS11055	COG1940	carbohydrate kinase activity
VIBNI_RS11065	COG4667	esterase of the alpha-beta hydrolase superfamily
VIBNI_RS11070	COG0733	neurotransmitter:sodium symporter activity
VIBNI_RS11075	COG2801	Transposase and inactivated derivatives
VIBNI_RS11080	COG2963	transposase activity
VIBNI_RS11090	COG0748	coenzyme F420 binding
VIBNI_RS11095	COG3721	Heme iron utilization protein
VIBNI_RS11105	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
VIBNI_RS11110	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
VIBNI_RS11115	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
VIBNI_RS11120	COG1263	PTS System
VIBNI_RS11120	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
VIBNI_RS11125	COG0084	hydrolase, TatD family'
VIBNI_RS11135	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
VIBNI_RS11140	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
VIBNI_RS11145	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
VIBNI_RS11150	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
VIBNI_RS11170	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
VIBNI_RS11175	COG0416	fatty acid biosynthetic process
VIBNI_RS11185	COG1399	metal-binding, possibly nucleic acid-binding protein
VIBNI_RS11190	COG0424	maF-like protein
VIBNI_RS11195	COG0564	pseudouridine synthase activity
VIBNI_RS11200	COG1530	ribonuclease E activity
VIBNI_RS11205	COG0659	secondary active sulfate transmembrane transporter activity
VIBNI_RS11210	COG3738	Protein conserved in bacteria
VIBNI_RS11215	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
VIBNI_RS11220	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
VIBNI_RS11235	COG0572	uridine kinase
VIBNI_RS11245	COG0730	response to heat
VIBNI_RS11250	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
VIBNI_RS11255	COG3716	PTS system mannose fructose sorbose family IID component
VIBNI_RS11260	COG3715	PTS system
VIBNI_RS11265	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
VIBNI_RS11270	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
VIBNI_RS11275	COG5492	domain, Protein
VIBNI_RS11280	COG0489	protein tyrosine kinase activity
VIBNI_RS11285	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
VIBNI_RS11285	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
VIBNI_RS11295	COG2186	Transcriptional regulator
VIBNI_RS11300	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
VIBNI_RS11315	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
VIBNI_RS11320	COG2199	diguanylate cyclase activity
VIBNI_RS11320	COG2203	Gaf domain
VIBNI_RS11325	COG1122	ATPase activity
VIBNI_RS11330	COG4120	Belongs to the binding-protein-dependent transport system permease family
VIBNI_RS11340	COG3092	negative regulation of chromosome organization
VIBNI_RS11345	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
VIBNI_RS11350	COG0857	belongs to the CobB CobQ family
VIBNI_RS11350	COG0280	phosphate acetyltransferase
VIBNI_RS11360	COG1704	LemA family
VIBNI_RS11375	COG0477	Major facilitator Superfamily
VIBNI_RS11380	COG0318	PFAM AMP-dependent synthetase and ligase
VIBNI_RS11395	COG0596	Alpha beta hydrolase
VIBNI_RS11400	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
VIBNI_RS11405	COG1169	isochorismate synthase
VIBNI_RS11410	COG0436	Aminotransferase
VIBNI_RS11415	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
VIBNI_RS11435	COG1555	photosystem II stabilization
VIBNI_RS11440	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
VIBNI_RS11450	COG0776	regulation of translation
VIBNI_RS11455	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
VIBNI_RS11470	COG0544	peptidyl-prolyl cis-trans isomerase activity
VIBNI_RS11480	COG2204	response regulator
VIBNI_RS11485	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
VIBNI_RS11490	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
VIBNI_RS11495	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
VIBNI_RS11500	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
VIBNI_RS11505	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
VIBNI_RS11510	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
VIBNI_RS11515	COG3424	synthase
VIBNI_RS11530	COG3842	ATPase activity
VIBNI_RS11535	COG0395	ABC-type sugar transport system, permease component
VIBNI_RS11540	COG1175	transmembrane transport
VIBNI_RS11560	COG3706	GGDEF domain
VIBNI_RS11565	COG0840	transmembrane signaling receptor activity
VIBNI_RS11570	COG2205	protein histidine kinase activity
VIBNI_RS11570	COG5002	protein histidine kinase activity
VIBNI_RS11570	COG0784	Response regulator, receiver
VIBNI_RS11585	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
VIBNI_RS11590	COG2951	lytic endotransglycosylase activity
VIBNI_RS11595	COG3100	YcgL domain-containing protein
VIBNI_RS11605	COG2894	cell division
VIBNI_RS11610	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
VIBNI_RS11615	COG2200	EAL domain
VIBNI_RS11615	COG2202	Pas domain
VIBNI_RS11615	COG2199	diguanylate cyclase activity
VIBNI_RS11630	COG2233	PERMEase
VIBNI_RS11645	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
VIBNI_RS11660	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
VIBNI_RS11665	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
VIBNI_RS11670	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
VIBNI_RS11675	COG0121	glutamine amidotransferase
VIBNI_RS11680	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
VIBNI_RS11685	COG1960	acyl-CoA dehydrogenase activity
VIBNI_RS11705	COG0328	RNA-DNA hybrid ribonuclease activity
VIBNI_RS11710	COG2226	methyltransferase
VIBNI_RS11715	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
VIBNI_RS11720	COG0741	lytic transglycosylase activity
VIBNI_RS11720	COG1388	LysM domain
VIBNI_RS11735	COG0347	Belongs to the P(II) protein family
VIBNI_RS11750	COG0037	tRNA processing
VIBNI_RS11755	COG0825	malonyl-CoA metabolic process
VIBNI_RS11760	COG0587	DNA-directed DNA polymerase activity
VIBNI_RS11765	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
VIBNI_RS11780	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
VIBNI_RS11790	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
VIBNI_RS11800	COG0750	zinc metalloprotease
VIBNI_RS11805	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
VIBNI_RS11810	COG0575	Belongs to the CDS family
VIBNI_RS11815	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
VIBNI_RS11820	COG0233	cytoplasmic translational termination
VIBNI_RS11835	COG0052	Belongs to the universal ribosomal protein uS2 family
VIBNI_RS11840	COG0024	Methionine aminopeptidase
VIBNI_RS11855	COG0564	pseudouridine synthase activity
VIBNI_RS11860	COG3098	single-species biofilm formation
VIBNI_RS11880	COG1671	Belongs to the UPF0178 family
VIBNI_RS11885	COG5595	Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310)
VIBNI_RS11895	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
VIBNI_RS11895	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
VIBNI_RS11910	COG1611	Belongs to the LOG family
VIBNI_RS11915	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
VIBNI_RS11925	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
VIBNI_RS11930	COG0318	PFAM AMP-dependent synthetase and ligase
VIBNI_RS11940	COG3065	identical protein binding
VIBNI_RS11950	COG1214	PFAM Peptidase M22, glycoprotease
VIBNI_RS11955	COG1199	ATP-dependent helicase activity
VIBNI_RS11965	COG0788	formyltetrahydrofolate deformylase activity
VIBNI_RS11970	COG3102	Protein conserved in bacteria
VIBNI_RS11980	COG0747	negative chemotaxis
VIBNI_RS12000	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
VIBNI_RS12015	COG1560	Kdo2-lipid A biosynthetic process
VIBNI_RS12030	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
VIBNI_RS12045	COG0739	heme binding
VIBNI_RS12050	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
VIBNI_RS12055	COG1121	(ABC) transporter
VIBNI_RS12060	COG1108	ABC-type Mn2 Zn2 transport systems permease components
VIBNI_RS12080	COG0076	glutamate decarboxylase activity
VIBNI_RS12085	COG1132	(ABC) transporter
VIBNI_RS12090	COG0859	PFAM glycosyl transferase family 9
VIBNI_RS12105	COG0508	dehydrogenase complex catalyzes the overall conversion of
VIBNI_RS12110	COG0567	Dehydrogenase, E1 component
VIBNI_RS12120	COG1053	succinate dehydrogenase
VIBNI_RS12125	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
VIBNI_RS12140	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
VIBNI_RS12150	COG0033	Phosphoglucomutase
VIBNI_RS12155	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
VIBNI_RS12160	COG0596	Alpha beta hydrolase
VIBNI_RS12180	COG0735	belongs to the Fur family
VIBNI_RS12185	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
VIBNI_RS12190	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
VIBNI_RS12190	COG1263	PTS System
VIBNI_RS12190	COG2190	(PTS) system
VIBNI_RS12200	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
VIBNI_RS12205	COG1940	carbohydrate kinase activity
VIBNI_RS12205	COG1846	Transcriptional regulator
VIBNI_RS12210	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
VIBNI_RS12210	COG4651	solute:proton antiporter activity
VIBNI_RS12215	COG2072	flavoprotein involved in K transport
VIBNI_RS12220	COG1028	Short-chain dehydrogenase reductase Sdr
VIBNI_RS12225	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
VIBNI_RS12230	COG1172	Belongs to the binding-protein-dependent transport system permease family
VIBNI_RS12235	COG1172	Belongs to the binding-protein-dependent transport system permease family
VIBNI_RS12240	COG1129	ABC transporter
VIBNI_RS12250	COG0235	Class ii aldolase
VIBNI_RS12265	COG0367	asparagine synthase
VIBNI_RS12275	COG3104	oligopeptide transport
VIBNI_RS12280	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
VIBNI_RS12290	COG0326	Molecular chaperone. Has ATPase activity
VIBNI_RS12295	COG3710	Transcriptional regulator
VIBNI_RS12315	COG0622	Phosphoesterase
VIBNI_RS12340	COG1090	epimerase
VIBNI_RS12345	COG0300	oxidoreductase activity
VIBNI_RS12350	COG3118	belongs to the thioredoxin family
VIBNI_RS12355	COG0330	HflC and HflK could
VIBNI_RS12365	COG0789	Transcriptional regulator
VIBNI_RS12370	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
VIBNI_RS12380	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
VIBNI_RS12385	COG3115	cell septum assembly
VIBNI_RS12390	COG2981	High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway
VIBNI_RS12400	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
VIBNI_RS12405	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
VIBNI_RS12410	COG2190	(PTS) system
VIBNI_RS12420	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
VIBNI_RS12430	COG3951	Flagellar rod assembly protein muramidase FlgJ
VIBNI_RS12430	COG1705	Flagellar rod assembly protein muramidase FlgJ
VIBNI_RS12435	COG1706	bacterial-type flagellum-dependent cell motility
VIBNI_RS12450	COG4787	bacterial-type flagellum-dependent cell motility
VIBNI_RS12465	COG1558	bacterial-type flagellum-dependent cell motility
VIBNI_RS12470	COG1815	bacterial-type flagellum-dependent cell motility
VIBNI_RS12485	COG0835	chemotaxis
VIBNI_RS12485	COG0784	Response regulator, receiver
VIBNI_RS12490	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
VIBNI_RS12530	COG3241	Transfers electrons from cytochrome c551 to cytochrome oxidase
VIBNI_RS12550	COG2608	mercury ion transmembrane transporter activity
VIBNI_RS12550	COG2217	Heavy metal translocating P-type atpase
VIBNI_RS12580	COG1187	pseudouridine synthase activity
VIBNI_RS12585	COG2840	Smr protein MutS2
VIBNI_RS12605	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
VIBNI_RS12620	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
VIBNI_RS12625	COG1566	PFAM secretion protein HlyD family protein
VIBNI_RS12630	COG0745	RESPONSE REGULATOR receiver
VIBNI_RS12635	COG0642	Histidine kinase
VIBNI_RS12640	COG2877	3-deoxy-8-phosphooctulonate synthase activity
VIBNI_RS12645	COG2912	Transglutaminase-like superfamily
VIBNI_RS12655	COG2890	protein-(glutamine-N5) methyltransferase activity
VIBNI_RS12670	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
VIBNI_RS12680	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
VIBNI_RS12685	COG0193	aminoacyl-tRNA hydrolase activity
VIBNI_RS12775	COG2706	6-phosphogluconolactonase activity
VIBNI_RS12780	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
VIBNI_RS12800	COG0395	ABC-type sugar transport system, permease component
VIBNI_RS12805	COG1024	Enoyl-CoA hydratase
VIBNI_RS12810	COG1028	Short-chain dehydrogenase reductase Sdr
VIBNI_RS12820	COG3842	ATPase activity
VIBNI_RS12830	COG1804	L-carnitine dehydratase bile acid-inducible protein F
VIBNI_RS12840	COG1702	phosphate starvation-inducible protein PhoH
VIBNI_RS12845	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
VIBNI_RS12850	COG4535	Mg2 and Co2 transporter CorC
VIBNI_RS12855	COG0815	Transfers the fatty acyl group on membrane lipoproteins
VIBNI_RS12860	COG2888	peptidyl-tyrosine sulfation
VIBNI_RS12865	COG0495	leucyl-tRNA aminoacylation
VIBNI_RS12870	COG2980	Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane
VIBNI_RS12875	COG1466	dna polymerase III delta subunit
VIBNI_RS12880	COG0799	negative regulation of ribosome biogenesis
VIBNI_RS12885	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
VIBNI_RS12890	COG0768	penicillin binding
VIBNI_RS12895	COG0772	Belongs to the SEDS family
VIBNI_RS12900	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
VIBNI_RS12905	COG1686	Belongs to the peptidase S11 family
VIBNI_RS12915	COG0321	lipoyl(octanoyl) transferase activity
VIBNI_RS12920	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
VIBNI_RS12935	COG0443	Heat shock 70 kDa protein
VIBNI_RS12940	COG1301	dicarboxylic acid transport
VIBNI_RS12955	COG0366	Alpha amylase catalytic
VIBNI_RS12960	COG1263	PTS System
VIBNI_RS12960	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
VIBNI_RS12965	COG1609	Transcriptional regulator
VIBNI_RS12975	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
VIBNI_RS12980	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
VIBNI_RS12985	COG2011	ABC-type metal ion transport system permease component
VIBNI_RS12990	COG1464	Belongs to the NlpA lipoprotein family
VIBNI_RS13000	COG1737	Transcriptional regulator
VIBNI_RS13005	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
VIBNI_RS13010	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
VIBNI_RS13015	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
VIBNI_RS13020	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
VIBNI_RS13025	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
VIBNI_RS13035	COG1940	carbohydrate kinase activity
VIBNI_RS13040	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
VIBNI_RS13045	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
VIBNI_RS13060	COG4948	Mandelate Racemase Muconate Lactonizing
VIBNI_RS13075	COG2188	Transcriptional regulator
VIBNI_RS13080	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
VIBNI_RS13090	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
VIBNI_RS13090	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
VIBNI_RS13095	COG2186	Transcriptional regulator
VIBNI_RS13100	COG3437	response regulator, receiver
VIBNI_RS13100	COG4999	Histidine kinase
VIBNI_RS13100	COG3850	Histidine kinase
VIBNI_RS13100	COG2205	protein histidine kinase activity
VIBNI_RS13130	COG0583	DNA-binding transcription factor activity
VIBNI_RS13135	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
VIBNI_RS13140	COG1115	amino acid carrier protein
VIBNI_RS13150	COG0519	Catalyzes the synthesis of GMP from XMP
VIBNI_RS13150	COG0518	GMP synthase (glutamine-hydrolyzing) activity
VIBNI_RS13155	COG0517	IMP dehydrogenase activity
VIBNI_RS13155	COG0516	GMP reductase activity
VIBNI_RS13165	COG1160	GTP binding
VIBNI_RS13170	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
VIBNI_RS13175	COG2976	Protein conserved in bacteria
VIBNI_RS13180	COG0124	histidyl-tRNA synthetase
VIBNI_RS13195	COG3063	Type IV pilus biogenesis stability protein PilW
VIBNI_RS13205	COG0105	UTP biosynthetic process
VIBNI_RS13210	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
VIBNI_RS13215	COG2975	iron-sulfur cluster assembly
VIBNI_RS13220	COG0633	Ferredoxin
VIBNI_RS13225	COG0443	Heat shock 70 kDa protein
VIBNI_RS13240	COG0822	iron-sulfur transferase activity
VIBNI_RS13255	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
VIBNI_RS13260	COG0483	inositol monophosphate 1-phosphatase activity
VIBNI_RS13270	COG1185	polyribonucleotide nucleotidyltransferase activity
VIBNI_RS13275	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
VIBNI_RS13280	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
VIBNI_RS13285	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
VIBNI_RS13290	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
VIBNI_RS13295	COG0195	Participates in both transcription termination and antitermination
VIBNI_RS13300	COG0779	Required for maturation of 30S ribosomal subunits
VIBNI_RS13315	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
VIBNI_RS13325	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
VIBNI_RS13330	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
VIBNI_RS13335	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
VIBNI_RS13340	COG1534	Rna-binding protein
VIBNI_RS13345	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
VIBNI_RS13350	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
VIBNI_RS13355	COG2027	D-alanyl-D-alanine carboxypeptidase
VIBNI_RS13370	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
VIBNI_RS13375	COG0739	heme binding
VIBNI_RS13400	COG0628	permease
VIBNI_RS13405	COG2813	Specifically methylates the guanine in position
VIBNI_RS13410	COG2205	protein histidine kinase activity
VIBNI_RS13410	COG0784	Response regulator, receiver
VIBNI_RS13415	COG0747	negative chemotaxis
VIBNI_RS13425	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
VIBNI_RS13430	COG0444	Belongs to the ABC transporter superfamily
VIBNI_RS13435	COG4608	Belongs to the ABC transporter superfamily
VIBNI_RS13445	COG2971	BadF BadG BcrA BcrD
VIBNI_RS13460	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
VIBNI_RS13465	COG3842	ATPase activity
VIBNI_RS13475	COG1840	ABC-type Fe3 transport system, periplasmic component
VIBNI_RS13480	COG0004	ammonium transporteR
VIBNI_RS13490	COG3112	Uncharacterised protein family (UPF0231)
VIBNI_RS13505	COG1049	propionate catabolic process, 2-methylcitrate cycle
VIBNI_RS13510	COG1752	Esterase of the alpha-beta hydrolase superfamily
VIBNI_RS13515	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
VIBNI_RS13520	COG1643	Atp-dependent helicase
VIBNI_RS13525	COG1489	DNA binding
VIBNI_RS13530	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
VIBNI_RS13535	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
VIBNI_RS13545	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
VIBNI_RS13550	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
VIBNI_RS13560	COG0842	Transport permease protein
VIBNI_RS13565	COG1131	(ABC) transporter
VIBNI_RS13570	COG0659	secondary active sulfate transmembrane transporter activity
VIBNI_RS13575	COG0288	reversible hydration of carbon dioxide
VIBNI_RS13585	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
VIBNI_RS13590	COG1968	undecaprenyl-diphosphatase activity
VIBNI_RS13595	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
VIBNI_RS13600	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
VIBNI_RS13605	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
VIBNI_RS13615	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
VIBNI_RS13620	COG0828	Belongs to the bacterial ribosomal protein bS21 family
VIBNI_RS13625	COG1610	YqeY-like protein
VIBNI_RS13630	COG0358	DNA primase activity
VIBNI_RS13635	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
VIBNI_RS13685	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
VIBNI_RS13690	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
VIBNI_RS13700	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
VIBNI_RS13705	COG1349	DNA-binding transcription factor activity
VIBNI_RS13710	COG0469	pyruvate kinase activity
VIBNI_RS13720	COG3447	MASE1 domain protein
VIBNI_RS13720	COG5001	Diguanylate cyclase
VIBNI_RS13720	COG5002	protein histidine kinase activity
VIBNI_RS13730	COG0028	Belongs to the TPP enzyme family
VIBNI_RS13735	COG1022	Amp-dependent synthetase and ligase
VIBNI_RS13740	COG0583	DNA-binding transcription factor activity
VIBNI_RS13750	COG0671	phosphoesterase, PA-phosphatase related
VIBNI_RS13785	COG1132	(ABC) transporter
VIBNI_RS13795	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
VIBNI_RS13805	COG1309	transcriptional regulator
VIBNI_RS13810	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
VIBNI_RS13815	COG0473	3-isopropylmalate dehydrogenase activity
VIBNI_RS13825	COG0066	3-isopropylmalate dehydratase activity
VIBNI_RS13845	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
VIBNI_RS13855	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
VIBNI_RS13860	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
VIBNI_RS13865	COG2967	ApaG domain
VIBNI_RS13880	COG3610	response to peptide
VIBNI_RS13885	COG2966	Psort location CytoplasmicMembrane, score
VIBNI_RS13890	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
VIBNI_RS13895	COG0211	Belongs to the bacterial ribosomal protein bL27 family
VIBNI_RS13900	COG0261	This protein binds to 23S rRNA in the presence of protein L20
VIBNI_RS13905	COG0142	geranyltranstransferase activity
VIBNI_RS13920	COG1438	arginine binding
VIBNI_RS13925	COG2358	TRAP transporter, solute receptor (TAXI family
VIBNI_RS13940	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
VIBNI_RS13945	COG0564	pseudouridine synthase activity
VIBNI_RS13950	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
VIBNI_RS13955	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
VIBNI_RS13965	COG0745	RESPONSE REGULATOR receiver
VIBNI_RS13990	COG2239	Acts as a magnesium transporter
VIBNI_RS13995	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
VIBNI_RS14000	COG1660	Displays ATPase and GTPase activities
VIBNI_RS14005	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
VIBNI_RS14010	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
VIBNI_RS14020	COG1137	ATPase activity
VIBNI_RS14035	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
VIBNI_RS14040	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
VIBNI_RS14040	COG0517	IMP dehydrogenase activity
VIBNI_RS14050	COG1127	ABC transporter
VIBNI_RS14055	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
VIBNI_RS14060	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
VIBNI_RS14065	COG2854	intermembrane phospholipid transfer
VIBNI_RS14075	COG5007	Belongs to the BolA IbaG family
VIBNI_RS14080	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
VIBNI_RS14085	COG0204	Acyl-transferase
VIBNI_RS14090	COG0525	valine-tRNA ligase activity
VIBNI_RS14095	COG2927	DNA polymerase III (CHI subunit)
VIBNI_RS14105	COG0795	lipopolysaccharide-transporting ATPase activity
VIBNI_RS14110	COG0795	lipopolysaccharide-transporting ATPase activity
VIBNI_RS14135	COG0312	modulator of DNA gyrase
VIBNI_RS14140	COG3028	Belongs to the UPF0307 family
VIBNI_RS14145	COG0312	modulator of DNA gyrase
VIBNI_RS14150	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
VIBNI_RS14155	COG3164	Protein of unknown function
VIBNI_RS14165	COG0424	maF-like protein
VIBNI_RS14170	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
VIBNI_RS14175	COG1792	Involved in formation and maintenance of cell shape
VIBNI_RS14180	COG1077	Cell shape determining protein MreB Mrl
VIBNI_RS14205	COG2165	general secretion pathway protein
VIBNI_RS14210	COG2165	general secretion pathway protein
VIBNI_RS14220	COG1459	type II secretion system
VIBNI_RS14225	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
VIBNI_RS14235	COG3409	Peptidoglycan-binding domain 1 protein
VIBNI_RS14235	COG3267	Type II secretory pathway component ExeA
VIBNI_RS14260	COG2200	EAL domain
VIBNI_RS14260	COG2199	diguanylate cyclase activity
VIBNI_RS14325	COG2801	Transposase and inactivated derivatives
VIBNI_RS14360	COG0629	single-stranded DNA binding
VIBNI_RS14365	COG2197	response regulator
VIBNI_RS14375	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
VIBNI_RS14385	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
VIBNI_RS14390	COG0527	aspartate kinase activity
VIBNI_RS14395	COG0646	methionine synthase
VIBNI_RS14395	COG1410	methionine synthase
VIBNI_RS14405	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
VIBNI_RS14445	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
VIBNI_RS14465	COG1486	melibiose metabolic process
VIBNI_RS14470	COG1447	Phosphotransferase system cellobiose-specific component IIA
VIBNI_RS14475	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
VIBNI_RS14490	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
VIBNI_RS14495	COG1178	ABC-type Fe3 transport system permease component
VIBNI_RS14505	COG0163	prenyltransferase activity
VIBNI_RS14510	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
VIBNI_RS14515	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
VIBNI_RS14520	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
VIBNI_RS14525	COG2105	PFAM AIG2 family protein
VIBNI_RS14535	COG0729	surface antigen
VIBNI_RS14620	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
VIBNI_RS14620	COG4191	Histidine kinase
VIBNI_RS14655	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
VIBNI_RS14735	COG3604	Transcriptional regulator
VIBNI_RS14740	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
VIBNI_RS14750	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
VIBNI_RS14760	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
VIBNI_RS14770	COG0251	oxidation-reduction process
VIBNI_RS14775	COG0501	Belongs to the peptidase M48B family
VIBNI_RS14780	COG4269	membrane
VIBNI_RS14800	COG2235	arginine
VIBNI_RS14805	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
VIBNI_RS14810	COG0540	Belongs to the ATCase OTCase family
VIBNI_RS14815	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
VIBNI_RS14850	COG0529	Catalyzes the synthesis of activated sulfate
VIBNI_RS14855	COG3273	potassium ion transport
VIBNI_RS14855	COG0471	metal ion transport
VIBNI_RS14860	COG2895	sulfate adenylyltransferase (ATP) activity
VIBNI_RS14865	COG0175	sulfate reduction
VIBNI_RS14870	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
VIBNI_RS14870	COG1648	precorrin-2 dehydrogenase activity
VIBNI_RS14885	COG2153	protein acetylation
VIBNI_RS14890	COG0697	spore germination
VIBNI_RS14930	COG0545	Peptidyl-prolyl cis-trans isomerase
VIBNI_RS14940	COG2873	o-acetylhomoserine
VIBNI_RS14945	COG0203	ribosomal protein L17
VIBNI_RS14950	COG0202	RNA polymerase activity
VIBNI_RS14965	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
VIBNI_RS14975	COG0201	protein transport
VIBNI_RS14980	COG0200	Binds to the 23S rRNA
VIBNI_RS14985	COG1841	ribosomal large subunit assembly
VIBNI_RS14995	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
VIBNI_RS15000	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
VIBNI_RS15005	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
VIBNI_RS15010	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
VIBNI_RS15015	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
VIBNI_RS15020	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
VIBNI_RS15030	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
VIBNI_RS15040	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
VIBNI_RS15050	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
VIBNI_RS15055	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
VIBNI_RS15060	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
VIBNI_RS15070	COG0088	Forms part of the polypeptide exit tunnel
VIBNI_RS15075	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
VIBNI_RS15080	COG0051	transcription antitermination factor activity, RNA binding
VIBNI_RS15095	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
VIBNI_RS15100	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
VIBNI_RS15105	COG0049	tRNA binding
VIBNI_RS15120	COG2923	Belongs to the DsrF TusC family
VIBNI_RS15125	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
VIBNI_RS15130	COG2964	Protein conserved in bacteria
VIBNI_RS15135	COG0545	Peptidyl-prolyl cis-trans isomerase
VIBNI_RS15145	COG2900	Belongs to the SlyX family
VIBNI_RS15150	COG1446	asparaginase
VIBNI_RS15155	COG1047	Peptidyl-prolyl cis-trans
VIBNI_RS15175	COG0488	(ABC) transporter
VIBNI_RS15195	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
VIBNI_RS15200	COG0429	hydrolase of the alpha beta-hydrolase fold
VIBNI_RS15210	COG3954	Phosphoribulokinase
VIBNI_RS15215	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
VIBNI_RS15220	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
VIBNI_RS15225	COG0557	exoribonuclease II activity
VIBNI_RS15230	COG3083	sulfuric ester hydrolase activity
VIBNI_RS15240	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
VIBNI_RS15240	COG1017	nitric oxide dioxygenase activity
VIBNI_RS15245	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
VIBNI_RS15250	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
VIBNI_RS15260	COG0330	HflC and HflK could
VIBNI_RS15265	COG0330	HflC and HflK could
VIBNI_RS15270	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
VIBNI_RS15280	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
VIBNI_RS15285	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
VIBNI_RS15290	COG0860	N-Acetylmuramoyl-L-alanine amidase
VIBNI_RS15295	COG0802	atpase or kinase
VIBNI_RS15300	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
VIBNI_RS15335	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
VIBNI_RS15340	COG1162	GTPase activity
VIBNI_RS15345	COG0688	phosphatidylethanolamine metabolic process
VIBNI_RS15350	COG0471	metal ion transport
VIBNI_RS15350	COG3273	potassium ion transport
VIBNI_RS15355	COG0584	glycerophosphoryl diester phosphodiesterase
VIBNI_RS15365	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
VIBNI_RS15370	COG1053	succinate dehydrogenase
VIBNI_RS15375	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
VIBNI_RS15380	COG3029	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
VIBNI_RS15410	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
VIBNI_RS15415	COG1509	lysine 2,3-aminomutase activity
VIBNI_RS15425	COG1285	pathogenesis
VIBNI_RS15435	COG0459	protein refolding
VIBNI_RS15445	COG0534	Mate efflux family protein
VIBNI_RS15475	COG0745	RESPONSE REGULATOR receiver
VIBNI_RS15480	COG2205	protein histidine kinase activity
VIBNI_RS15490	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
VIBNI_RS15510	COG2026	Addiction module toxin, RelE StbE family
VIBNI_RS15565	COG1027	Aspartate ammonia-lyase
VIBNI_RS15570	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
VIBNI_RS15575	COG4232	protein-disulfide reductase activity
VIBNI_RS15585	COG4191	Histidine kinase
VIBNI_RS15590	COG2204	response regulator
VIBNI_RS15605	COG3842	ATPase activity
VIBNI_RS15620	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
VIBNI_RS15640	COG2205	protein histidine kinase activity
VIBNI_RS15640	COG2198	Histidine kinase
VIBNI_RS15640	COG0784	Response regulator, receiver
VIBNI_RS15645	COG2814	Major facilitator Superfamily
VIBNI_RS15660	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
VIBNI_RS15670	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
VIBNI_RS15675	COG0511	ligase activity, forming carbon-carbon bonds
VIBNI_RS15680	COG0439	Biotin carboxylase
VIBNI_RS15690	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
VIBNI_RS15695	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
VIBNI_RS15700	COG0840	transmembrane signaling receptor activity
VIBNI_RS15710	COG0789	Transcriptional regulator
VIBNI_RS15715	COG0138	bifunctional purine biosynthesis protein purh
VIBNI_RS15720	COG0151	Belongs to the GarS family
VIBNI_RS15735	COG1253	flavin adenine dinucleotide binding
VIBNI_RS15740	COG0583	DNA-binding transcription factor activity
VIBNI_RS15760	COG1573	uracil-dna glycosylase
VIBNI_RS15765	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
VIBNI_RS15775	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
VIBNI_RS15780	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
VIBNI_RS15790	COG0222	ribosome binding
VIBNI_RS15795	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
VIBNI_RS15810	COG0250	Participates in transcription elongation, termination and antitermination
VIBNI_RS15815	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
VIBNI_RS15820	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
VIBNI_RS15845	COG1072	(Pantothenic acid kinase))
VIBNI_RS15850	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
VIBNI_RS15850	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
VIBNI_RS15855	COG0812	UDP-N-acetylmuramate dehydrogenase activity
VIBNI_RS15860	COG2153	protein acetylation
VIBNI_RS15865	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
VIBNI_RS15950	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
VIBNI_RS15960	COG4206	TonB-dependent receptor
VIBNI_RS15965	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
VIBNI_RS15980	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
VIBNI_RS15985	COG0534	Mate efflux family protein
VIBNI_RS15990	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
VIBNI_RS15995	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
VIBNI_RS16000	COG2937	Belongs to the GPAT DAPAT family
VIBNI_RS16010	COG0596	Alpha beta hydrolase
VIBNI_RS16030	COG1218	3'(2'),5'-bisphosphate nucleotidase
VIBNI_RS16035	COG0494	nUDIX hydrolase
VIBNI_RS16045	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
VIBNI_RS16050	COG3297	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
VIBNI_RS16055	COG3156	type II secretion system protein K
VIBNI_RS16060	COG4795	General secretion pathway protein
VIBNI_RS16065	COG2165	general secretion pathway protein
VIBNI_RS16070	COG2165	general secretion pathway protein
VIBNI_RS16075	COG2165	general secretion pathway protein
VIBNI_RS16080	COG1459	type II secretion system
VIBNI_RS16085	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
VIBNI_RS16095	COG3031	protein transport across the cell outer membrane
VIBNI_RS16100	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
VIBNI_RS16105	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
VIBNI_RS16110	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
VIBNI_RS16120	COG0456	acetyltransferase
VIBNI_RS16140	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
VIBNI_RS16145	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
VIBNI_RS16200	COG0218	Necessary for normal cell division and for the maintenance of normal septation
VIBNI_RS16210	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
VIBNI_RS16210	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
VIBNI_RS16225	COG0084	hydrolase, TatD family'
VIBNI_RS16230	COG0805	protein transport
VIBNI_RS16235	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
VIBNI_RS16240	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
VIBNI_RS16245	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
VIBNI_RS16250	COG3165	ubiquinone biosynthetic process from chorismate
VIBNI_RS16255	COG2226	methyltransferase
VIBNI_RS16260	COG1322	Protein conserved in bacteria
VIBNI_RS16270	COG3085	chromosome segregation
VIBNI_RS16280	COG1609	Transcriptional regulator
VIBNI_RS16335	COG4964	Belongs to the GSP D family
VIBNI_RS16370	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
VIBNI_RS16390	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
VIBNI_RS16415	COG2081	HI0933 family
VIBNI_RS16425	COG1528	Iron-storage protein
VIBNI_RS16430	COG0589	response to stress
VIBNI_RS16445	COG5002	protein histidine kinase activity
VIBNI_RS16445	COG5001	Diguanylate cyclase
VIBNI_RS16450	COG1522	sequence-specific DNA binding
VIBNI_RS16460	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
VIBNI_RS16465	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
VIBNI_RS16515	COG0277	FAD linked oxidase domain protein
VIBNI_RS16525	COG1260	myo-inositol-1-phosphate synthase
VIBNI_RS16535	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
VIBNI_RS16540	COG1217	gtp-binding protein TYPA
VIBNI_RS16545	COG0174	glutamine synthetase
VIBNI_RS16555	COG3852	Histidine kinase
VIBNI_RS16560	COG2204	response regulator
VIBNI_RS16565	COG3300	MHYT domain
VIBNI_RS16565	COG5001	Diguanylate cyclase
VIBNI_RS16570	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
VIBNI_RS16575	COG4989	oxidoreductase activity
VIBNI_RS16595	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
VIBNI_RS16600	COG0601	transmembrane transport
VIBNI_RS16605	COG0747	negative chemotaxis
VIBNI_RS16650	COG1309	transcriptional regulator
VIBNI_RS16655	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
VIBNI_RS16660	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
VIBNI_RS16665	COG2960	long-chain fatty acid transporting porin activity
VIBNI_RS16670	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
VIBNI_RS16675	COG0583	DNA-binding transcription factor activity
VIBNI_RS16710	COG0175	sulfate reduction
VIBNI_RS16715	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
VIBNI_RS16720	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
VIBNI_RS16740	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
VIBNI_RS16760	COG1876	peptidase activity
VIBNI_RS16865	COG0735	belongs to the Fur family
VIBNI_RS16880	COG0432	Pfam Uncharacterised protein family UPF0047
VIBNI_RS16900	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
VIBNI_RS16920	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
VIBNI_RS16925	COG2965	DNA replication, synthesis of RNA primer
VIBNI_RS16930	COG0360	Binds together with S18 to 16S ribosomal RNA
VIBNI_RS16950	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
VIBNI_RS17010	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
VIBNI_RS17020	COG0583	DNA-binding transcription factor activity
VIBNI_RS17030	COG0180	Tryptophanyl-tRNA synthetase
VIBNI_RS17035	COG0546	phosphoglycolate phosphatase activity
VIBNI_RS17040	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
VIBNI_RS17045	COG0338	D12 class N6 adenine-specific DNA methyltransferase
VIBNI_RS17055	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
VIBNI_RS17090	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
VIBNI_RS17100	COG0678	peroxiredoxin activity
VIBNI_RS17100	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
VIBNI_RS17105	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
VIBNI_RS17115	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
VIBNI_RS17115	COG0165	Argininosuccinate lyase
VIBNI_RS17120	COG0137	argininosuccinate synthase activity
VIBNI_RS17125	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
VIBNI_RS17130	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
VIBNI_RS17135	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
VIBNI_RS17140	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
VIBNI_RS17150	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
VIBNI_RS17155	COG0527	aspartate kinase activity
VIBNI_RS17155	COG0460	homoserine dehydrogenase
VIBNI_RS17160	COG0626	cystathionine gamma-synthase activity
VIBNI_RS17170	COG0281	malic enzyme
VIBNI_RS17175	COG0254	rRNA binding
VIBNI_RS17180	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
VIBNI_RS17185	COG1609	Transcriptional regulator
VIBNI_RS17195	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
VIBNI_RS17205	COG1575	Belongs to the MenA family. Type 1 subfamily
VIBNI_RS17215	COG3074	FtsZ-dependent cytokinesis
VIBNI_RS17220	COG1494	fructose-1,6-bisphosphatase
VIBNI_RS17245	COG0149	triose-phosphate isomerase activity
VIBNI_RS17250	COG1414	Transcriptional regulator
VIBNI_RS17290	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
VIBNI_RS17295	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
VIBNI_RS17300	COG2373	Large extracellular alpha-helical protein
VIBNI_RS17305	COG4953	penicillin-binding protein 1C
VIBNI_RS17315	COG4942	peptidase
VIBNI_RS17325	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
VIBNI_RS17345	COG1216	Glycosyl transferase, family 2
VIBNI_RS17345	COG0463	Glycosyl transferase, family 2
VIBNI_RS17360	COG1134	teichoic acid transport
VIBNI_RS17405	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
VIBNI_RS17435	COG0438	transferase activity, transferring glycosyl groups
VIBNI_RS17440	COG2843	Capsule synthesis protein
VIBNI_RS17450	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
VIBNI_RS17460	COG0812	UDP-N-acetylmuramate dehydrogenase activity
VIBNI_RS17520	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
VIBNI_RS17525	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
VIBNI_RS17530	COG0859	PFAM glycosyl transferase family 9
VIBNI_RS17535	COG1519	Transferase
VIBNI_RS17555	COG1216	Glycosyl transferase, family 2
VIBNI_RS17560	COG0859	PFAM glycosyl transferase family 9
VIBNI_RS17565	COG0463	Glycosyl transferase, family 2
VIBNI_RS17570	COG0859	PFAM glycosyl transferase family 9
VIBNI_RS17575	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
VIBNI_RS17590	COG0267	Belongs to the bacterial ribosomal protein bL33 family
VIBNI_RS17595	COG0227	Belongs to the bacterial ribosomal protein bL28 family
VIBNI_RS17600	COG2003	Belongs to the UPF0758 family
VIBNI_RS17605	COG1858	cytochrome C peroxidase
VIBNI_RS17610	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
VIBNI_RS17615	COG1309	transcriptional regulator
VIBNI_RS17620	COG1560	Kdo2-lipid A biosynthetic process
VIBNI_RS17625	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
VIBNI_RS17630	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
VIBNI_RS17645	COG1561	YicC-like family, N-terminal region
VIBNI_RS17655	COG0194	GDP metabolic process
VIBNI_RS17660	COG1758	RNA polymerase activity
VIBNI_RS17665	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
VIBNI_RS17670	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
VIBNI_RS17685	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
VIBNI_RS17710	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
VIBNI_RS17725	COG0243	molybdopterin cofactor binding
VIBNI_RS17730	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
VIBNI_RS17735	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
VIBNI_RS17740	COG2183	response to ionizing radiation
VIBNI_RS17750	COG3642	lipopolysaccharide core region biosynthetic process
VIBNI_RS17755	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
VIBNI_RS17760	COG3161	chorismate lyase activity
VIBNI_RS17790	COG2177	Part of the ABC transporter FtsEX involved in
VIBNI_RS17795	COG2884	Cell division ATP-binding protein ftsE
VIBNI_RS17800	COG0552	protein localization to endoplasmic reticulum
VIBNI_RS17805	COG0742	ribosomal rna small subunit methyltransferase
VIBNI_RS17815	COG2095	MarC family integral membrane protein
VIBNI_RS17840	COG3274	enterobacterial common antigen metabolic process
VIBNI_RS17845	COG4221	oxidoreductase activity
VIBNI_RS17850	COG0583	DNA-binding transcription factor activity
VIBNI_RS17855	COG0783	Belongs to the Dps family
VIBNI_RS17870	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
VIBNI_RS17875	COG0640	Transcriptional regulator
VIBNI_RS17880	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
VIBNI_RS17885	COG1280	lysine exporter protein (LysE YggA)
VIBNI_RS17890	COG2267	carboxylic ester hydrolase activity
VIBNI_RS17895	COG0561	phosphatase activity
VIBNI_RS17910	COG3148	PFAM DTW domain containing protein
VIBNI_RS17920	COG2200	EAL domain
VIBNI_RS17920	COG3287	FIST C domain
VIBNI_RS17920	COG2199	diguanylate cyclase activity
VIBNI_RS17925	COG1011	Hydrolase
VIBNI_RS17930	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
VIBNI_RS17940	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
VIBNI_RS17945	COG0019	diaminopimelate decarboxylase activity
VIBNI_RS17955	COG3072	Adenylate cyclase
VIBNI_RS17965	COG1587	Uroporphyrinogen-III synthase
VIBNI_RS17970	COG2959	enzyme of heme biosynthesis
VIBNI_RS17975	COG3071	HemY protein
VIBNI_RS18025	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
VIBNI_RS18040	COG3118	belongs to the thioredoxin family
VIBNI_RS18050	COG0248	Ppx GppA phosphatase
VIBNI_RS18060	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
VIBNI_RS18075	COG2188	Transcriptional regulator
VIBNI_RS18080	COG0673	inositol 2-dehydrogenase activity
VIBNI_RS18085	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
VIBNI_RS18095	COG0514	ATP-dependent DNA helicase (RecQ)
VIBNI_RS18100	COG2962	Rard protein
VIBNI_RS18110	COG1280	lysine exporter protein (LysE YggA)
VIBNI_RS18115	COG0405	Gamma-glutamyltransferase
VIBNI_RS18120	COG0210	DNA helicase
VIBNI_RS18130	COG3220	belongs to the UPF0276 family
VIBNI_RS18160	COG0006	proline dipeptidase activity
VIBNI_RS18160	COG0006	proline dipeptidase activity
VIBNI_RS18170	COG2022	thiamine diphosphate biosynthetic process
VIBNI_RS18180	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
VIBNI_RS18185	COG0352	thiamine-phosphate diphosphorylase activity
VIBNI_RS18190	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
VIBNI_RS18195	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
VIBNI_RS18235	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
VIBNI_RS18245	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
VIBNI_RS18250	COG0408	coproporphyrinogen oxidase activity
VIBNI_RS18260	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
VIBNI_RS18265	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
VIBNI_RS18270	COG0551	DNA topoisomerase type I activity
VIBNI_RS18275	COG2922	Belongs to the Smg family
VIBNI_RS18280	COG0758	DNA mediated transformation
VIBNI_RS18285	COG1652	LysM domain
VIBNI_RS18290	COG0242	peptide deformylase activity
VIBNI_RS18300	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
VIBNI_RS18300	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
VIBNI_RS18305	COG0569	domain protein
VIBNI_RS18310	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
VIBNI_RS18315	COG1272	protein, Hemolysin III
VIBNI_RS18320	COG4326	sporulation control protein
VIBNI_RS18325	COG3084	Protein conserved in bacteria
VIBNI_RS18335	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
VIBNI_RS18340	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
VIBNI_RS18345	COG0204	Acyl-transferase
VIBNI_RS18355	COG0606	chelatase, subunit chli
VIBNI_RS18365	COG3978	acetolactate synthase activity
VIBNI_RS18370	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
VIBNI_RS18375	COG0129	dihydroxy-acid dehydratase activity
VIBNI_RS18385	COG0583	DNA-binding transcription factor activity
VIBNI_RS18390	COG2814	Major facilitator Superfamily
VIBNI_RS18395	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
VIBNI_RS18400	COG0765	amino acid transport
VIBNI_RS18410	COG0355	proton-transporting ATP synthase activity, rotational mechanism
VIBNI_RS18420	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
VIBNI_RS18425	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
VIBNI_RS18430	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
VIBNI_RS18435	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
VIBNI_RS18445	COG0356	it plays a direct role in the translocation of protons across the membrane
VIBNI_RS18450	COG3312	ion transport
VIBNI_RS18455	COG1475	DNA binding
VIBNI_RS18460	COG1192	Involved in chromosome partitioning
VIBNI_RS18465	COG0357	Ribosomal RNA small subunit methyltransferase G
VIBNI_RS18470	COG0445	tRNA wobble uridine modification
VIBNI_RS18475	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
VIBNI_RS18485	COG0848	biopolymer transport protein
VIBNI_RS18525	COG1595	DNA-templated transcription, initiation
VIBNI_RS18530	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
VIBNI_RS18535	COG0706	membrane insertase activity
VIBNI_RS18540	COG0594	ribonuclease P activity
VIBNI_RS18545	COG0230	Belongs to the bacterial ribosomal protein bL34 family
VIBNI_RS18550	COG1126	abc transporter atp-binding protein
VIBNI_RS19540	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
VIBNI_RS19540	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
VIBNI_RS19655	COG0768	penicillin binding
VIBNI_RS19755	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
VIBNI_RS20325	COG1966	Carbon starvation protein
VIBNI_RS20415	COG5001	Diguanylate cyclase
VIBNI_RS20465	COG0542	response to heat
VIBNI_RS20475	COG0542	response to heat
VIBNI_RS20935	COG1129	ABC transporter
VIBNI_RS21185	COG0583	DNA-binding transcription factor activity
VIBNI_RS21395	COG1074	ATP-dependent DNA helicase activity
VIBNI_RS21615	COG0442	prolyl-tRNA aminoacylation
VIBNI_RS21770	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
VIBNI_RS21830	COG0047	phosphoribosylformylglycinamidine synthase activity
VIBNI_RS21830	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
VIBNI_RS21860	COG1073	alpha beta
VIBNI_RS21880	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
VIBNI_RS22095	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
VIBNI_RS22100	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
VIBNI_RS22160	COG1766	The M ring may be actively involved in energy transduction
VIBNI_RS22285	COG0835	chemotaxis
VIBNI_RS22320	COG1138	Cytochrome C-type biogenesis protein
VIBNI_RS22325	COG1138	Cytochrome C-type biogenesis protein
VIBNI_RS22330	COG1138	Cytochrome C-type biogenesis protein
VIBNI_RS22365	COG2067	long-chain fatty acid transport protein
VIBNI_RS22410	COG0583	DNA-binding transcription factor activity
VIBNI_RS22835	COG1051	belongs to the nudix hydrolase family
VIBNI_RS22900	COG3284	Transcriptional regulator
VIBNI_RS22975	COG1012	belongs to the aldehyde dehydrogenase family
VIBNI_RS22975	COG1454	alcohol dehydrogenase
VIBNI_RS22980	COG1454	alcohol dehydrogenase
VIBNI_RS22980	COG1012	belongs to the aldehyde dehydrogenase family
VIBNI_RS23020	COG2885	chlorophyll binding
VIBNI_RS23445	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
VIBNI_RS23675	COG3845	ABC transporter
VIBNI_RS23815	COG0840	transmembrane signaling receptor activity
VIBNI_RS24050	COG2985	domain, Protein
VIBNI_RS24050	COG3273	potassium ion transport
VIBNI_RS24740	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
VIBNI_RS24940	COG0322	excinuclease ABC activity
VIBNI_RS25190	COG1842	Phage shock protein A
VIBNI_RS25350	COG2326	polyphosphate kinase activity
VIBNI_RS25785	COG5002	protein histidine kinase activity
VIBNI_RS25785	COG2198	Histidine kinase
VIBNI_RS25785	COG0784	Response regulator, receiver
VIBNI_RS26750	COG0004	ammonium transporteR
VIBNI_RS27005	COG2902	Dehydrogenase
VIBNI_RS27010	COG2902	Dehydrogenase
VIBNI_RS27030	COG0308	aminopeptidase N
VIBNI_RS27435	COG3290	protein histidine kinase activity
VIBNI_RS28130	COG2205	protein histidine kinase activity
VIBNI_RS28130	COG0784	Response regulator, receiver
VIBNI_RS28225	COG0017	Asparaginyl-tRNA synthetase
VIBNI_RS28235	COG2770	Histidine kinase
VIBNI_RS28235	COG3437	response regulator, receiver
VIBNI_RS28505	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
VIBNI_RS28640	COG1051	belongs to the nudix hydrolase family
VIBNI_RS28650	COG4890	Cyd operon protein YbgT