RK51_RS00065	SM00851	MGS-like domain
RK51_RS00065	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
RK51_RS00070	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
RK51_RS00085	SM00957	SecA DEAD-like domain
RK51_RS00085	SM00958	SecA preprotein cross-linking domain
RK51_RS00100	SM00864	Tubulin/FtsZ family, GTPase domain
RK51_RS00100	SM00865	Tubulin/FtsZ family, C-terminal domain
RK51_RS00105	SM00842	Cell division protein FtsA
RK51_RS00195	SM00749	bacterial OsmY and nodulation domain
RK51_RS00255	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RK51_RS00260	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RK51_RS00265	SM00434	DNA Topoisomerase IV
RK51_RS00270	SM00387	Histidine kinase-like ATPases
RK51_RS00270	SM00433	TopoisomeraseII
RK51_RS00310	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_RS00320	SM00880	RK51_RS00320
RK51_RS00320	SM01118	RK51_RS00320
RK51_RS00335	SM00287	Bacterial SH3 domain homologues
RK51_RS00345	SM00382	ATPases associated with a variety of cellular activities
RK51_RS00365	SM00905	Dihydroneopterin aldolase
RK51_RS00370	SM01207	RK51_RS00370
RK51_RS00395	SM00400	zinc finger
RK51_RS00395	SM00493	RK51_RS00395
RK51_RS00395	SM00766	DNA primase DnaG DnaB-binding
RK51_RS00420	SM00342	helix_turn_helix, arabinose operon control protein
RK51_RS00425	SM00052	Putative diguanylate phosphodiesterase
RK51_RS00480	SM01120	RK51_RS00480
RK51_RS00495	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_RS00495	SM00387	Histidine kinase-like ATPases
RK51_RS00495	SM00388	His Kinase A (phosphoacceptor) domain
RK51_RS00500	SM00448	cheY-homologous receiver domain
RK51_RS00500	SM00862	Transcriptional regulatory protein, C terminal
RK51_RS00515	SM00420	helix_turn_helix, Deoxyribose operon repressor
RK51_RS00515	SM01134	RK51_RS00515
RK51_RS00530	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RK51_RS00535	SM00267	diguanylate cyclase
RK51_RS00575	SM00917	LeuA allosteric (dimerisation) domain
RK51_RS00580	SM01329	RK51_RS00580
RK51_RS00600	SM00271	DnaJ molecular chaperone homology domain
RK51_RS00620	SM00650	Ribosomal RNA adenine dimethylases
RK51_RS00710	SM00382	ATPases associated with a variety of cellular activities
RK51_RS00795	SM00382	ATPases associated with a variety of cellular activities
RK51_RS00855	SM00487	DEAD-like helicases superfamily
RK51_RS00855	SM00490	helicase superfamily c-terminal domain
RK51_RS00885	SM00662	RNA polymerases D
RK51_RS00890	SM00363	S4 RNA-binding domain
RK51_RS00890	SM01390	RK51_RS00890
RK51_RS00955	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
RK51_RS00960	SM01374	RK51_RS00960
RK51_RS00980	SM00322	K homology RNA-binding domain
RK51_RS00995	SM01382	RK51_RS00995
RK51_RS00995	SM01383	RK51_RS00995
RK51_RS01015	SM01403	RK51_RS01015
RK51_RS01030	SM00487	DEAD-like helicases superfamily
RK51_RS01030	SM00490	helicase superfamily c-terminal domain
RK51_RS01035	SM00354	helix_turn _helix lactose operon repressor
RK51_RS01050	SM00382	ATPases associated with a variety of cellular activities
RK51_RS01050	SM01086	C-terminal, D2-small domain, of ClpB protein
RK51_RS01105	SM00849	Metallo-beta-lactamase superfamily
RK51_RS01105	SM01027	Beta-Casp domain
RK51_RS01115	SM00984	UDP binding domain
RK51_RS01385	SM00672	Putative lipopolysaccharide-modifying enzyme.
RK51_RS01395	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
RK51_RS01395	SM01232	RK51_RS01395
RK51_RS01425	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_RS01425	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_RS01425	SM01049	RK51_RS01425
RK51_RS01540	SM00257	Lysin motif
RK51_RS01590	SM00382	ATPases associated with a variety of cellular activities
RK51_RS01595	SM00382	ATPases associated with a variety of cellular activities
RK51_RS01650	SM00028	Tetratricopeptide repeats
RK51_RS01655	SM00072	Guanylate kinase homologues.
RK51_RS01660	SM01409	RK51_RS01660
RK51_RS01665	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RK51_RS01665	SM00954	Region found in RelA / SpoT proteins
RK51_RS01675	SM00487	DEAD-like helicases superfamily
RK51_RS01675	SM00490	helicase superfamily c-terminal domain
RK51_RS01690	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_RS01690	SM00387	Histidine kinase-like ATPases
RK51_RS01690	SM00388	His Kinase A (phosphoacceptor) domain
RK51_RS01695	SM00448	cheY-homologous receiver domain
RK51_RS01695	SM00862	Transcriptional regulatory protein, C terminal
RK51_RS01715	SM00316	Ribosomal protein S1-like RNA-binding domain
RK51_RS01715	SM00732	Likely ribonuclease with RNase H fold.
RK51_RS01795	SM00382	ATPases associated with a variety of cellular activities
RK51_RS01810	SM00363	S4 RNA-binding domain
RK51_RS01860	SM01230	RK51_RS01860
RK51_RS01870	SM00091	PAS domain
RK51_RS01870	SM00387	Histidine kinase-like ATPases
RK51_RS01870	SM00388	His Kinase A (phosphoacceptor) domain
RK51_RS01875	SM00382	ATPases associated with a variety of cellular activities
RK51_RS01875	SM00448	cheY-homologous receiver domain
RK51_RS01880	SM00052	Putative diguanylate phosphodiesterase
RK51_RS01880	SM00267	diguanylate cyclase
RK51_RS01880	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_RS01890	SM00729	Elongator protein 3, MiaB family, Radical SAM
RK51_RS01935	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
RK51_RS01935	SM00474	3'-5' exonuclease
RK51_RS01935	SM00475	5'-3' exonuclease
RK51_RS01935	SM00482	DNA polymerase A domain
RK51_RS01950	SM01004	Delta-aminolevulinic acid dehydratase
RK51_RS02010	SM00052	Putative diguanylate phosphodiesterase
RK51_RS02010	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RK51_RS02010	SM00091	PAS domain
RK51_RS02010	SM00267	diguanylate cyclase
RK51_RS02065	SM00749	bacterial OsmY and nodulation domain
RK51_RS02070	SM00382	ATPases associated with a variety of cellular activities
RK51_RS02110	SM00052	Putative diguanylate phosphodiesterase
RK51_RS02110	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RK51_RS02110	SM00091	PAS domain
RK51_RS02110	SM00267	diguanylate cyclase
RK51_RS02115	SM00344	helix_turn_helix ASNC type
RK51_RS02185	SM00354	helix_turn _helix lactose operon repressor
RK51_RS02190	SM00220	Serine/Threonine protein kinases, catalytic domain
RK51_RS02240	SM00382	ATPases associated with a variety of cellular activities
RK51_RS02390	SM01001	AIR carboxylase
RK51_RS02415	SM00257	Lysin motif
RK51_RS02485	SM00563	Phosphate acyltransferases
RK51_RS02495	SM00382	ATPases associated with a variety of cellular activities
RK51_RS02535	SM00062	Bacterial periplasmic substrate-binding proteins
RK51_RS02555	SM00382	ATPases associated with a variety of cellular activities
RK51_RS02595	SM00470	ParB-like nuclease domain
RK51_RS02610	SM01228	RK51_RS02610
RK51_RS02685	SM00487	DEAD-like helicases superfamily
RK51_RS02735	SM01234	RK51_RS02735
RK51_RS02750	SM00382	ATPases associated with a variety of cellular activities
RK51_RS02760	SM00062	Bacterial periplasmic substrate-binding proteins
RK51_RS02760	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
RK51_RS02775	SM00382	ATPases associated with a variety of cellular activities
RK51_RS02775	SM00760	Bacterial dnaA protein helix-turn-helix domain
RK51_RS02780	SM00480	DNA polymerase III beta subunit
RK51_RS02790	SM00387	Histidine kinase-like ATPases
RK51_RS02790	SM00433	TopoisomeraseII
RK51_RS02820	SM00642	Alpha-amylase domain
RK51_RS02860	SM00829	Enoylreductase
RK51_RS02970	SM00876	Biotin and Thiamin Synthesis associated domain
RK51_RS03035	SM00342	helix_turn_helix, arabinose operon control protein
RK51_RS03045	SM00341	Helicase and RNase D C-terminal
RK51_RS03045	SM00487	DEAD-like helicases superfamily
RK51_RS03045	SM00490	helicase superfamily c-terminal domain
RK51_RS03045	SM00956	RK51_RS03045
RK51_RS03070	SM00487	DEAD-like helicases superfamily
RK51_RS03070	SM00490	helicase superfamily c-terminal domain
RK51_RS03080	SM00357	Cold shock protein domain
RK51_RS03080	SM00382	ATPases associated with a variety of cellular activities
RK51_RS03080	SM00959	Rho termination factor, N-terminal domain
RK51_RS03150	SM00028	Tetratricopeptide repeats
RK51_RS03175	SM01219	RK51_RS03175
RK51_RS03210	SM00052	Putative diguanylate phosphodiesterase
RK51_RS03210	SM00897	FIST N domain
RK51_RS03210	SM01204	RK51_RS03210
RK51_RS03215	SM01144	RK51_RS03215
RK51_RS03250	SM00052	Putative diguanylate phosphodiesterase
RK51_RS03255	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RK51_RS03260	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
RK51_RS03330	SM00382	ATPases associated with a variety of cellular activities
RK51_RS03330	SM00962	SRP54-type protein, GTPase domain
RK51_RS03330	SM00963	SRP54-type protein, helical bundle domain
RK51_RS03335	SM00382	ATPases associated with a variety of cellular activities
RK51_RS03355	SM00450	Rhodanese Homology Domain
RK51_RS03380	SM00563	Phosphate acyltransferases
RK51_RS03440	SM00360	RNA recognition motif
RK51_RS03465	SM00155	Phospholipase D. Active site motifs.
RK51_RS03530	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
RK51_RS03530	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
RK51_RS03535	SM00649	Ribosomal protein L11/L12
RK51_RS03560	SM00663	RNA polymerase I subunit A N-terminus
RK51_RS03590	SM00986	Uracil DNA glycosylase superfamily
RK51_RS03590	SM00987	UreE urease accessory protein, C-terminal domain 
RK51_RS03610	SM00411	bacterial (prokaryotic) histone like domain
RK51_RS03620	SM01209	RK51_RS03620
RK51_RS03620	SM01210	RK51_RS03620
RK51_RS03630	SM00798	AICARFT/IMPCHase bienzyme
RK51_RS03630	SM00851	MGS-like domain
RK51_RS03640	SM00422	helix_turn_helix, mercury resistance
RK51_RS03645	SM00862	Transcriptional regulatory protein, C terminal
RK51_RS03715	SM00267	diguanylate cyclase
RK51_RS03720	SM00382	ATPases associated with a variety of cellular activities
RK51_RS03750	SM00878	Biotin carboxylase C-terminal domain
RK51_RS03770	SM00479	RK51_RS03770
RK51_RS03785	SM00387	Histidine kinase-like ATPases
RK51_RS03785	SM00388	His Kinase A (phosphoacceptor) domain
RK51_RS03785	SM00448	cheY-homologous receiver domain
RK51_RS03820	SM01091	Transporter associated domain
RK51_RS03825	SM00421	helix_turn_helix, Lux Regulon
RK51_RS03825	SM00448	cheY-homologous receiver domain
RK51_RS03860	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_RS03860	SM00387	Histidine kinase-like ATPases
RK51_RS03860	SM00388	His Kinase A (phosphoacceptor) domain
RK51_RS03865	SM00448	cheY-homologous receiver domain
RK51_RS03865	SM00862	Transcriptional regulatory protein, C terminal
RK51_RS03895	SM00883	Chaperonin 10 Kd subunit
RK51_RS03920	SM01005	Alanine racemase, C-terminal domain
RK51_RS03940	SM00841	Elongation factor P, C-terminal
RK51_RS03940	SM01185	RK51_RS03940
RK51_RS04000	SM00971	Serine acetyltransferase, N-terminal
RK51_RS04015	SM00450	Rhodanese Homology Domain
RK51_RS04030	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_RS04030	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_RS04050	SM00479	RK51_RS04050
RK51_RS04130	SM00257	Lysin motif
RK51_RS04130	SM00646	RK51_RS04130
RK51_RS04135	SM00853	MutL C terminal dimerisation domain
RK51_RS04135	SM01340	RK51_RS04135
RK51_RS04155	SM00244	prohibitin homologues
RK51_RS04160	SM00244	prohibitin homologues
RK51_RS04170	SM00788	Adenylosuccinate synthetase
RK51_RS04180	SM00671	Sel1-like repeats.
RK51_RS04195	SM00316	Ribosomal protein S1-like RNA-binding domain
RK51_RS04195	SM00357	Cold shock protein domain
RK51_RS04195	SM00955	RK51_RS04195
RK51_RS04200	SM00967	RNA 2'-O ribose methyltransferase substrate binding
RK51_RS04260	SM01150	RK51_RS04260
RK51_RS04265	SM00100	Cyclic nucleotide-monophosphate binding domain
RK51_RS04265	SM00419	helix_turn_helix, cAMP Regulatory protein
RK51_RS04290	SM00382	ATPases associated with a variety of cellular activities
RK51_RS04335	SM00320	WD40 repeats
RK51_RS04375	SM00838	Elongation factor G C-terminus
RK51_RS04375	SM00889	Elongation factor G, domain IV
RK51_RS04395	SM00919	Malic enzyme, NAD binding domain
RK51_RS04395	SM01274	RK51_RS04395
RK51_RS04435	SM00859	Semialdehyde dehydrogenase, NAD binding domain
RK51_RS04500	SM00965	Secretin and TonB N terminus short domain
RK51_RS04560	SM01005	Alanine racemase, C-terminal domain
RK51_RS04710	SM01018	B12 binding domain
RK51_RS04745	SM00421	helix_turn_helix, Lux Regulon
RK51_RS04755	SM00052	Putative diguanylate phosphodiesterase
RK51_RS04755	SM00267	diguanylate cyclase
RK51_RS04775	SM00965	Secretin and TonB N terminus short domain
RK51_RS04785	SM00028	Tetratricopeptide repeats
RK51_RS04790	SM00382	ATPases associated with a variety of cellular activities
RK51_RS04860	SM00316	Ribosomal protein S1-like RNA-binding domain
RK51_RS04880	SM00670	Large family of predicted nucleotide-binding domains
RK51_RS04885	SM00487	DEAD-like helicases superfamily
RK51_RS04885	SM00490	helicase superfamily c-terminal domain
RK51_RS04920	SM00116	Domain in cystathionine beta-synthase and other proteins.
RK51_RS04920	SM00924	MgtE intracellular N domain
RK51_RS04950	SM00382	ATPases associated with a variety of cellular activities
RK51_RS04965	SM00116	Domain in cystathionine beta-synthase and other proteins.
RK51_RS04975	SM00382	ATPases associated with a variety of cellular activities
RK51_RS05010	SM00563	Phosphate acyltransferases
RK51_RS05060	SM00347	helix_turn_helix multiple antibiotic resistance protein
RK51_RS05115	SM00495	Chitin-binding domain type 3
RK51_RS05145	SM00354	helix_turn _helix lactose operon repressor
RK51_RS05150	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RK51_RS05230	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_RS05230	SM01049	RK51_RS05230
RK51_RS05280	SM00478	endonuclease III
RK51_RS05280	SM00525	RK51_RS05280
RK51_RS05300	SM00729	Elongator protein 3, MiaB family, Radical SAM
RK51_RS05315	SM01152	RK51_RS05315
RK51_RS05345	SM00732	Likely ribonuclease with RNase H fold.
RK51_RS05370	SM00731	SprT homologues.
RK51_RS05390	SM00861	Transketolase, pyrimidine binding domain
RK51_RS05405	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
RK51_RS05545	SM00838	Elongation factor G C-terminus
RK51_RS05555	SM00358	Double-stranded RNA binding motif
RK51_RS05555	SM00535	Ribonuclease III family
RK51_RS05580	SM00073	Histidine Phosphotransfer domain
RK51_RS05580	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_RS05580	SM00387	Histidine kinase-like ATPases
RK51_RS05580	SM00388	His Kinase A (phosphoacceptor) domain
RK51_RS05580	SM00448	cheY-homologous receiver domain
RK51_RS05600	SM00954	Region found in RelA / SpoT proteins
RK51_RS05615	SM01192	RK51_RS05615
RK51_RS05615	SM01193	RK51_RS05615
RK51_RS05650	SM00257	Lysin motif
RK51_RS05660	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
RK51_RS05660	SM00534	ATPase domain of DNA mismatch repair MUTS family
RK51_RS05670	SM00382	ATPases associated with a variety of cellular activities
RK51_RS05680	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
RK51_RS05760	SM00829	Enoylreductase
RK51_RS05790	SM01091	Transporter associated domain
RK51_RS05800	SM00382	ATPases associated with a variety of cellular activities
RK51_RS05800	SM00962	SRP54-type protein, GTPase domain
RK51_RS05800	SM00963	SRP54-type protein, helical bundle domain
RK51_RS05865	SM00644	RK51_RS05865
RK51_RS05870	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RK51_RS05870	SM00895	RK51_RS05870
RK51_RS05900	SM00947	Carbonic anhydrase
RK51_RS05915	SM00382	ATPases associated with a variety of cellular activities
RK51_RS05985	SM00487	DEAD-like helicases superfamily
RK51_RS05985	SM00490	helicase superfamily c-terminal domain
RK51_RS05985	SM00847	Helicase associated domain (HA2)  Add an annotation
RK51_RS06010	SM00938	Nitrogen regulatory protein P-II
RK51_RS06030	SM00382	ATPases associated with a variety of cellular activities
RK51_RS06040	SM01068	Putative carbohydrate binding domain
RK51_RS06060	SM00382	ATPases associated with a variety of cellular activities
RK51_RS06065	SM00382	ATPases associated with a variety of cellular activities
RK51_RS06085	SM00091	PAS domain
RK51_RS06085	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_RS06085	SM00387	Histidine kinase-like ATPases
RK51_RS06085	SM00388	His Kinase A (phosphoacceptor) domain
RK51_RS06085	SM00448	cheY-homologous receiver domain
RK51_RS06155	SM01103	RK51_RS06155
RK51_RS06165	SM00382	ATPases associated with a variety of cellular activities
RK51_RS06205	SM00316	Ribosomal protein S1-like RNA-binding domain
RK51_RS06225	SM01387	RK51_RS06225
RK51_RS06230	SM00316	Ribosomal protein S1-like RNA-binding domain
RK51_RS06230	SM00322	K homology RNA-binding domain
RK51_RS06235	SM00028	Tetratricopeptide repeats
RK51_RS06240	SM00347	helix_turn_helix multiple antibiotic resistance protein
RK51_RS06260	SM00052	Putative diguanylate phosphodiesterase
RK51_RS06260	SM00091	PAS domain
RK51_RS06260	SM00267	diguanylate cyclase
RK51_RS06310	SM01133	RK51_RS06310
RK51_RS06315	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
RK51_RS06345	SM00382	ATPases associated with a variety of cellular activities
RK51_RS06350	SM00838	Elongation factor G C-terminus
RK51_RS06350	SM00889	Elongation factor G, domain IV
RK51_RS06370	SM00342	helix_turn_helix, arabinose operon control protein
RK51_RS06385	SM00382	ATPases associated with a variety of cellular activities
RK51_RS06390	SM00858	RK51_RS06390
RK51_RS06440	SM00028	Tetratricopeptide repeats
RK51_RS06470	SM01038	Beta galactosidase small chain
RK51_RS06475	SM00354	helix_turn _helix lactose operon repressor
RK51_RS06505	SM00354	helix_turn _helix lactose operon repressor
RK51_RS06520	SM00354	helix_turn _helix lactose operon repressor
RK51_RS06550	SM00420	helix_turn_helix, Deoxyribose operon repressor
RK51_RS06550	SM01134	RK51_RS06550
RK51_RS06665	SM00925	MltA specific insert domain
RK51_RS06680	SM00267	diguanylate cyclase
RK51_RS06770	SM00900	RK51_RS06770
RK51_RS06810	SM00487	DEAD-like helicases superfamily
RK51_RS06810	SM00490	helicase superfamily c-terminal domain
RK51_RS06825	SM00495	Chitin-binding domain type 3
RK51_RS06825	SM00636	RK51_RS06825
RK51_RS06920	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RK51_RS06965	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RK51_RS06975	SM00935	Outer membrane protein (OmpH-like)
RK51_RS07005	SM00481	DNA polymerase alpha chain like domain
RK51_RS07015	SM00977	TilS substrate C-terminal domain
RK51_RS07025	SM00938	Nitrogen regulatory protein P-II
RK51_RS07040	SM00257	Lysin motif
RK51_RS07045	SM00849	Metallo-beta-lactamase superfamily
RK51_RS07060	SM00479	RK51_RS07060
RK51_RS07130	SM00028	Tetratricopeptide repeats
RK51_RS07155	SM01130	RK51_RS07155
RK51_RS07255	SM00382	ATPases associated with a variety of cellular activities
RK51_RS07260	SM00387	Histidine kinase-like ATPases
RK51_RS07260	SM00388	His Kinase A (phosphoacceptor) domain
RK51_RS07265	SM00382	ATPases associated with a variety of cellular activities
RK51_RS07265	SM00448	cheY-homologous receiver domain
RK51_RS07290	SM00382	ATPases associated with a variety of cellular activities
RK51_RS07350	SM00382	ATPases associated with a variety of cellular activities
RK51_RS07350	SM00962	SRP54-type protein, GTPase domain
RK51_RS07365	SM00448	cheY-homologous receiver domain
RK51_RS07375	SM00073	Histidine Phosphotransfer domain
RK51_RS07375	SM00260	Two component signalling adaptor domain
RK51_RS07375	SM00387	Histidine kinase-like ATPases
RK51_RS07375	SM01231	RK51_RS07375
RK51_RS07380	SM00448	cheY-homologous receiver domain
RK51_RS07390	SM00260	Two component signalling adaptor domain
RK51_RS07395	SM00260	Two component signalling adaptor domain
RK51_RS07405	SM00382	ATPases associated with a variety of cellular activities
RK51_RS07500	SM00855	Phosphoglycerate mutase family
RK51_RS07505	SM00463	Small MutS-related domain
RK51_RS07555	SM00825	Beta-ketoacyl synthase
RK51_RS07570	SM00859	Semialdehyde dehydrogenase, NAD binding domain
RK51_RS07615	SM00448	cheY-homologous receiver domain
RK51_RS07635	SM00382	ATPases associated with a variety of cellular activities
RK51_RS07645	SM00493	RK51_RS07645
RK51_RS07710	SM00098	Alkaline phosphatase homologues
RK51_RS07735	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_RS07745	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
RK51_RS07765	SM00870	RK51_RS07765
RK51_RS07785	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
RK51_RS07785	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
RK51_RS07785	SM00493	RK51_RS07785
RK51_RS07845	SM00859	Semialdehyde dehydrogenase, NAD binding domain
RK51_RS07895	SM00479	RK51_RS07895
RK51_RS07925	SM00478	endonuclease III
RK51_RS07925	SM00525	RK51_RS07925
RK51_RS07935	SM00900	RK51_RS07935
RK51_RS07970	SM00487	DEAD-like helicases superfamily
RK51_RS07970	SM00490	helicase superfamily c-terminal domain
RK51_RS07975	SM00382	ATPases associated with a variety of cellular activities
RK51_RS07975	SM00448	cheY-homologous receiver domain
RK51_RS07990	SM00729	Elongator protein 3, MiaB family, Radical SAM
RK51_RS07995	SM00852	Probable molybdopterin binding domain
RK51_RS08030	SM00382	ATPases associated with a variety of cellular activities
RK51_RS08035	SM00382	ATPases associated with a variety of cellular activities
RK51_RS08080	SM00382	ATPases associated with a variety of cellular activities
RK51_RS08085	SM00642	Alpha-amylase domain
RK51_RS08090	SM00267	diguanylate cyclase
RK51_RS08115	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RK51_RS08150	SM00226	Low molecular weight phosphatase family
RK51_RS08165	SM00316	Ribosomal protein S1-like RNA-binding domain
RK51_RS08180	SM00363	S4 RNA-binding domain
RK51_RS08210	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
RK51_RS08215	SM00822	RK51_RS08215
RK51_RS08225	SM00825	Beta-ketoacyl synthase
RK51_RS08305	SM00260	Two component signalling adaptor domain
RK51_RS08305	SM00448	cheY-homologous receiver domain
RK51_RS08310	SM00481	DNA polymerase alpha chain like domain
RK51_RS08325	SM00822	RK51_RS08325
RK51_RS08340	SM00316	Ribosomal protein S1-like RNA-binding domain
RK51_RS08345	SM00411	bacterial (prokaryotic) histone like domain
RK51_RS08355	SM00028	Tetratricopeptide repeats
RK51_RS08360	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
RK51_RS08420	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
RK51_RS08435	SM00387	Histidine kinase-like ATPases
RK51_RS08435	SM00388	His Kinase A (phosphoacceptor) domain
RK51_RS08440	SM00421	helix_turn_helix, Lux Regulon
RK51_RS08440	SM00448	cheY-homologous receiver domain
RK51_RS08510	SM00382	ATPases associated with a variety of cellular activities
RK51_RS08520	SM00342	helix_turn_helix, arabinose operon control protein
RK51_RS08560	SM00220	Serine/Threonine protein kinases, catalytic domain
RK51_RS08560	SM00364	Leucine-rich repeats, bacterial type
RK51_RS08560	SM00369	Leucine-rich repeats, typical (most populated) subfamily
RK51_RS08565	SM00387	Histidine kinase-like ATPases
RK51_RS08565	SM00388	His Kinase A (phosphoacceptor) domain
RK51_RS08570	SM00448	cheY-homologous receiver domain
RK51_RS08570	SM00862	Transcriptional regulatory protein, C terminal
RK51_RS08580	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_RS08580	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_RS08585	SM00729	Elongator protein 3, MiaB family, Radical SAM
RK51_RS08590	SM00052	Putative diguanylate phosphodiesterase
RK51_RS08590	SM00091	PAS domain
RK51_RS08645	SM00387	Histidine kinase-like ATPases
RK51_RS08645	SM00388	His Kinase A (phosphoacceptor) domain
RK51_RS08645	SM00448	cheY-homologous receiver domain
RK51_RS08670	SM00100	Cyclic nucleotide-monophosphate binding domain
RK51_RS08670	SM00419	helix_turn_helix, cAMP Regulatory protein
RK51_RS08710	SM00481	DNA polymerase alpha chain like domain
RK51_RS08725	SM00363	S4 RNA-binding domain
RK51_RS08740	SM00841	Elongation factor P, C-terminal
RK51_RS08740	SM01185	RK51_RS08740
RK51_RS08750	SM00486	DNA polymerase type-B family
RK51_RS08755	SM00421	helix_turn_helix, Lux Regulon
RK51_RS08755	SM00448	cheY-homologous receiver domain
RK51_RS08760	SM00278	Helix-hairpin-helix DNA-binding motif class 1
RK51_RS08760	SM00465	GIY-YIG type nucleases (URI domain)
RK51_RS08815	SM00852	Probable molybdopterin binding domain
RK51_RS08840	SM00434	DNA Topoisomerase IV
RK51_RS08930	SM00849	Metallo-beta-lactamase superfamily
RK51_RS08960	SM00387	Histidine kinase-like ATPases
RK51_RS08960	SM01049	RK51_RS08960
RK51_RS08965	SM00421	helix_turn_helix, Lux Regulon
RK51_RS08965	SM00448	cheY-homologous receiver domain
RK51_RS08970	SM00347	helix_turn_helix multiple antibiotic resistance protein
RK51_RS08980	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_RS08980	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_RS08985	SM00479	RK51_RS08985
RK51_RS08990	SM00100	Cyclic nucleotide-monophosphate binding domain
RK51_RS08990	SM00116	Domain in cystathionine beta-synthase and other proteins.
RK51_RS09025	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RK51_RS09040	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_RS09040	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_RS09055	SM00052	Putative diguanylate phosphodiesterase
RK51_RS09080	SM00387	Histidine kinase-like ATPases
RK51_RS09080	SM00388	His Kinase A (phosphoacceptor) domain
RK51_RS09080	SM00448	cheY-homologous receiver domain
RK51_RS09115	SM00091	PAS domain
RK51_RS09115	SM00382	ATPases associated with a variety of cellular activities
RK51_RS09440	SM00974	RK51_RS09440
RK51_RS10055	SM01230	RK51_RS10055
RK51_RS10070	SM00530	Helix-turn-helix XRE-family like proteins 
RK51_RS10105	SM01131	RK51_RS10105
RK51_RS10115	SM00052	Putative diguanylate phosphodiesterase
RK51_RS10125	SM00635	Bacterial Ig-like domain 2
RK51_RS10130	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
RK51_RS10135	SM00342	helix_turn_helix, arabinose operon control protein
RK51_RS10145	SM00347	helix_turn_helix multiple antibiotic resistance protein
RK51_RS10160	SM01118	RK51_RS10160
RK51_RS10170	SM01266	RK51_RS10170
RK51_RS10185	SM00387	Histidine kinase-like ATPases
RK51_RS10185	SM00388	His Kinase A (phosphoacceptor) domain
RK51_RS10185	SM00448	cheY-homologous receiver domain
RK51_RS10190	SM00052	Putative diguanylate phosphodiesterase
RK51_RS10190	SM00267	diguanylate cyclase
RK51_RS10190	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_RS10200	SM00028	Tetratricopeptide repeats
RK51_RS10280	SM00387	Histidine kinase-like ATPases
RK51_RS10280	SM00388	His Kinase A (phosphoacceptor) domain
RK51_RS10285	SM00448	cheY-homologous receiver domain
RK51_RS10285	SM00862	Transcriptional regulatory protein, C terminal
RK51_RS10295	SM00822	RK51_RS10295
RK51_RS10300	SM01236	RK51_RS10300
RK51_RS10325	SM00382	ATPases associated with a variety of cellular activities
RK51_RS10330	SM00100	Cyclic nucleotide-monophosphate binding domain
RK51_RS10330	SM00116	Domain in cystathionine beta-synthase and other proteins.
RK51_RS10335	SM00479	RK51_RS10335
RK51_RS10395	SM00091	PAS domain
RK51_RS10395	SM00387	Histidine kinase-like ATPases
RK51_RS10400	SM00448	cheY-homologous receiver domain
RK51_RS10415	SM01350	RK51_RS10415
RK51_RS10440	SM00382	ATPases associated with a variety of cellular activities
RK51_RS10465	SM00342	helix_turn_helix, arabinose operon control protein
RK51_RS10620	SM00382	ATPases associated with a variety of cellular activities
RK51_RS10715	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RK51_RS10715	SM00895	RK51_RS10715
RK51_RS10750	SM00020	Trypsin-like serine protease
RK51_RS10750	SM00495	Chitin-binding domain type 3
RK51_RS10775	SM00028	Tetratricopeptide repeats
RK51_RS10775	SM00267	diguanylate cyclase
RK51_RS10795	SM00327	von Willebrand factor (vWF) type A domain
RK51_RS10795	SM00736	Dystroglycan-type cadherin-like domains.
RK51_RS10815	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
RK51_RS10820	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_RS10845	SM00382	ATPases associated with a variety of cellular activities
RK51_RS10860	SM00062	Bacterial periplasmic substrate-binding proteins
RK51_RS10900	SM00316	Ribosomal protein S1-like RNA-binding domain
RK51_RS10925	SM00382	ATPases associated with a variety of cellular activities
RK51_RS10935	SM00945	ProQ/FINO family
RK51_RS10940	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RK51_RS10940	SM00245	tail specific protease
RK51_RS10980	SM00981	RK51_RS10980
RK51_RS10990	SM00382	ATPases associated with a variety of cellular activities
RK51_RS11110	SM00479	RK51_RS11110
RK51_RS11120	SM00387	Histidine kinase-like ATPases
RK51_RS11120	SM00388	His Kinase A (phosphoacceptor) domain
RK51_RS11120	SM00448	cheY-homologous receiver domain
RK51_RS11125	SM00897	FIST N domain
RK51_RS11125	SM01204	RK51_RS11125
RK51_RS11175	SM00100	Cyclic nucleotide-monophosphate binding domain
RK51_RS11175	SM00419	helix_turn_helix, cAMP Regulatory protein
RK51_RS11210	SM00382	ATPases associated with a variety of cellular activities
RK51_RS11290	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
RK51_RS11330	SM00382	ATPases associated with a variety of cellular activities
RK51_RS11340	SM00387	Histidine kinase-like ATPases
RK51_RS11340	SM00388	His Kinase A (phosphoacceptor) domain
RK51_RS11345	SM00382	ATPases associated with a variety of cellular activities
RK51_RS11345	SM00448	cheY-homologous receiver domain
RK51_RS11365	SM00382	ATPases associated with a variety of cellular activities
RK51_RS11375	SM00852	Probable molybdopterin binding domain
RK51_RS11390	SM01144	RK51_RS11390
RK51_RS11425	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_RS11440	SM00267	diguanylate cyclase
RK51_RS11445	SM00448	cheY-homologous receiver domain
RK51_RS11510	SM00382	ATPases associated with a variety of cellular activities
RK51_RS11510	SM00448	cheY-homologous receiver domain
RK51_RS11590	SM00382	ATPases associated with a variety of cellular activities
RK51_RS11590	SM00487	DEAD-like helicases superfamily
RK51_RS11590	SM00490	helicase superfamily c-terminal domain
RK51_RS11590	SM00847	Helicase associated domain (HA2)  Add an annotation
RK51_RS11620	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
RK51_RS11645	SM00479	RK51_RS11645
RK51_RS11650	SM00267	diguanylate cyclase
RK51_RS11650	SM01079	RK51_RS11650
RK51_RS11695	SM00382	ATPases associated with a variety of cellular activities
RK51_RS11700	SM00382	ATPases associated with a variety of cellular activities
RK51_RS11740	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RK51_RS11745	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
RK51_RS11790	SM00240	Forkhead associated domain
RK51_RS11810	SM00344	helix_turn_helix ASNC type
RK51_RS11845	SM00220	Serine/Threonine protein kinases, catalytic domain
RK51_RS11880	SM00382	ATPases associated with a variety of cellular activities
RK51_RS11880	SM01086	C-terminal, D2-small domain, of ClpB protein
RK51_RS11885	SM00382	ATPases associated with a variety of cellular activities
RK51_RS11945	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RK51_RS11950	SM00052	Putative diguanylate phosphodiesterase
RK51_RS11950	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RK51_RS11950	SM00091	PAS domain
RK51_RS11950	SM00267	diguanylate cyclase
RK51_RS11955	SM00448	cheY-homologous receiver domain
RK51_RS11960	SM00100	Cyclic nucleotide-monophosphate binding domain
RK51_RS11960	SM00387	Histidine kinase-like ATPases
RK51_RS11980	SM00855	Phosphoglycerate mutase family
RK51_RS12100	SM00862	Transcriptional regulatory protein, C terminal
RK51_RS12280	SM00316	Ribosomal protein S1-like RNA-binding domain
RK51_RS12280	SM00357	Cold shock protein domain
RK51_RS12280	SM00955	RK51_RS12280
RK51_RS12285	SM00357	Cold shock protein domain
RK51_RS12440	SM00382	ATPases associated with a variety of cellular activities
RK51_RS12445	SM00382	ATPases associated with a variety of cellular activities
RK51_RS12460	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
RK51_RS12490	SM01130	RK51_RS12490
RK51_RS12525	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RK51_RS12525	SM00895	RK51_RS12525
RK51_RS12535	SM00245	tail specific protease
RK51_RS12605	SM00382	ATPases associated with a variety of cellular activities
RK51_RS12630	SM00855	Phosphoglycerate mutase family
RK51_RS12660	SM00479	RK51_RS12660
RK51_RS12695	SM00411	bacterial (prokaryotic) histone like domain
RK51_RS12710	SM00873	B3/4 domain
RK51_RS12710	SM00874	tRNA synthetase B5 domain
RK51_RS12710	SM00896	Ferredoxin-fold anticodon binding domain
RK51_RS12720	SM00267	diguanylate cyclase
RK51_RS12745	SM00530	Helix-turn-helix XRE-family like proteins 
RK51_RS12770	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
RK51_RS12785	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RK51_RS12785	SM00866	RK51_RS12785
RK51_RS12875	SM00487	DEAD-like helicases superfamily
RK51_RS12875	SM00490	helicase superfamily c-terminal domain
RK51_RS12875	SM00847	Helicase associated domain (HA2)  Add an annotation
RK51_RS12880	SM00919	Malic enzyme, NAD binding domain
RK51_RS12880	SM01274	RK51_RS12880
RK51_RS12895	SM00267	diguanylate cyclase
RK51_RS12920	SM00382	ATPases associated with a variety of cellular activities
RK51_RS12925	SM00382	ATPases associated with a variety of cellular activities
RK51_RS12945	SM00100	Cyclic nucleotide-monophosphate binding domain
RK51_RS12945	SM00387	Histidine kinase-like ATPases
RK51_RS12950	SM00448	cheY-homologous receiver domain
RK51_RS13050	SM00382	ATPases associated with a variety of cellular activities
RK51_RS13100	SM00363	S4 RNA-binding domain
RK51_RS13105	SM00487	DEAD-like helicases superfamily
RK51_RS13105	SM00490	helicase superfamily c-terminal domain
RK51_RS13115	SM00448	cheY-homologous receiver domain
RK51_RS13115	SM00862	Transcriptional regulatory protein, C terminal
RK51_RS13120	SM00387	Histidine kinase-like ATPases
RK51_RS13165	SM00421	helix_turn_helix, Lux Regulon
RK51_RS13165	SM00448	cheY-homologous receiver domain
RK51_RS13170	SM00387	Histidine kinase-like ATPases
RK51_RS13170	SM00388	His Kinase A (phosphoacceptor) domain
RK51_RS13175	SM00450	Rhodanese Homology Domain
RK51_RS13205	SM00382	ATPases associated with a variety of cellular activities
RK51_RS13225	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
RK51_RS13225	SM00382	ATPases associated with a variety of cellular activities
RK51_RS13250	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_RS13250	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_RS13260	SM00155	Phospholipase D. Active site motifs.
RK51_RS13315	SM00382	ATPases associated with a variety of cellular activities
RK51_RS13335	SM00382	ATPases associated with a variety of cellular activities
RK51_RS13340	SM00382	ATPases associated with a variety of cellular activities
RK51_RS13350	SM01131	RK51_RS13350
RK51_RS13425	SM00840	RK51_RS13425
RK51_RS13440	SM00052	Putative diguanylate phosphodiesterase
RK51_RS13495	SM00382	ATPases associated with a variety of cellular activities
RK51_RS13510	SM00528	Domain in histone-like proteins of HNS family
RK51_RS13610	SM00729	Elongator protein 3, MiaB family, Radical SAM
RK51_RS13610	SM00876	Biotin and Thiamin Synthesis associated domain
RK51_RS13640	SM00382	ATPases associated with a variety of cellular activities
RK51_RS13650	SM00843	RK51_RS13650
RK51_RS13655	SM00344	helix_turn_helix ASNC type
RK51_RS13660	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
RK51_RS13660	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
RK51_RS13710	SM00347	helix_turn_helix multiple antibiotic resistance protein
RK51_RS13735	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_RS13735	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_RS13750	SM00857	Resolvase, N terminal domain
RK51_RS13785	SM00387	Histidine kinase-like ATPases
RK51_RS13785	SM00388	His Kinase A (phosphoacceptor) domain
RK51_RS13785	SM00448	cheY-homologous receiver domain
RK51_RS13820	SM00028	Tetratricopeptide repeats
RK51_RS13875	SM00382	ATPases associated with a variety of cellular activities
RK51_RS13880	SM00278	Helix-hairpin-helix DNA-binding motif class 1
RK51_RS13885	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_RS13965	SM00448	cheY-homologous receiver domain
RK51_RS13965	SM00862	Transcriptional regulatory protein, C terminal
RK51_RS13975	SM00354	helix_turn _helix lactose operon repressor
RK51_RS14010	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
RK51_RS14010	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
RK51_RS14010	SM00493	RK51_RS14010
RK51_RS14040	SM00316	Ribosomal protein S1-like RNA-binding domain
RK51_RS14050	SM00382	ATPases associated with a variety of cellular activities
RK51_RS14050	SM01086	C-terminal, D2-small domain, of ClpB protein
RK51_RS14060	SM00357	Cold shock protein domain
RK51_RS14085	SM00491	RK51_RS14085
RK51_RS14110	SM01276	RK51_RS14110
RK51_RS14125	SM00062	Bacterial periplasmic substrate-binding proteins
RK51_RS14125	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
RK51_RS14130	SM00382	ATPases associated with a variety of cellular activities
RK51_RS14180	SM00763	PrkA AAA domain
RK51_RS14210	SM00382	ATPases associated with a variety of cellular activities
RK51_RS14215	SM00849	Metallo-beta-lactamase superfamily
RK51_RS14230	SM00382	ATPases associated with a variety of cellular activities
RK51_RS14245	SM00487	DEAD-like helicases superfamily
RK51_RS14245	SM00490	helicase superfamily c-terminal domain
RK51_RS14245	SM00982	RK51_RS14245
RK51_RS14245	SM01058	CarD-like/TRCF domain
RK51_RS14300	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_RS14300	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_RS14325	SM00116	Domain in cystathionine beta-synthase and other proteins.
RK51_RS14355	SM00062	Bacterial periplasmic substrate-binding proteins
RK51_RS14355	SM00267	diguanylate cyclase
RK51_RS14385	SM00344	helix_turn_helix ASNC type
RK51_RS14455	SM00978	RK51_RS14455
RK51_RS14465	SM00563	Phosphate acyltransferases
RK51_RS14490	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
RK51_RS14520	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RK51_RS14525	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RK51_RS14530	SM01144	RK51_RS14530
RK51_RS14540	SM00278	Helix-hairpin-helix DNA-binding motif class 1
RK51_RS14550	SM00411	bacterial (prokaryotic) histone like domain
RK51_RS14555	SM00382	ATPases associated with a variety of cellular activities
RK51_RS14555	SM00464	Found in ATP-dependent protease La (LON)
RK51_RS14560	SM00382	ATPases associated with a variety of cellular activities
RK51_RS14560	SM00994	ClpX C4-type zinc finger
RK51_RS14560	SM01086	C-terminal, D2-small domain, of ClpB protein
RK51_RS14575	SM00387	Histidine kinase-like ATPases
RK51_RS14575	SM00388	His Kinase A (phosphoacceptor) domain
RK51_RS14580	SM00382	ATPases associated with a variety of cellular activities
RK51_RS14580	SM00448	cheY-homologous receiver domain
RK51_RS14615	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
RK51_RS14635	SM00487	DEAD-like helicases superfamily
RK51_RS14635	SM00490	helicase superfamily c-terminal domain
RK51_RS14640	SM01091	Transporter associated domain
RK51_RS14670	SM00563	Phosphate acyltransferases
RK51_RS14730	SM00825	Beta-ketoacyl synthase
RK51_RS14740	SM00822	RK51_RS14740
RK51_RS14745	SM00825	Beta-ketoacyl synthase
RK51_RS14800	SM00474	3'-5' exonuclease
RK51_RS14830	SM00487	DEAD-like helicases superfamily
RK51_RS14830	SM00491	RK51_RS14830
RK51_RS14850	SM00836	DALR anticodon binding domain
RK51_RS14850	SM01016	Arginyl tRNA synthetase N terminal dom
RK51_RS14870	SM00899	RK51_RS14870
RK51_RS14885	SM00342	helix_turn_helix, arabinose operon control protein
RK51_RS14895	SM00382	ATPases associated with a variety of cellular activities
RK51_RS14905	SM00881	CoA binding domain
RK51_RS14920	SM00861	Transketolase, pyrimidine binding domain
RK51_RS15030	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
RK51_RS15050	SM00387	Histidine kinase-like ATPases
RK51_RS15055	SM00862	Transcriptional regulatory protein, C terminal
RK51_RS15085	SM00116	Domain in cystathionine beta-synthase and other proteins.
RK51_RS15090	SM00938	Nitrogen regulatory protein P-II
RK51_RS15125	SM00244	prohibitin homologues
RK51_RS15155	SM00278	Helix-hairpin-helix DNA-binding motif class 1
RK51_RS15155	SM00292	breast cancer carboxy-terminal domain
RK51_RS15155	SM00532	Ligase N family
RK51_RS15160	SM00771	ZipA, C-terminal domain (FtsZ-binding)
RK51_RS15235	SM00047	Lysozyme subfamily 2
RK51_RS15285	SM00138	Methyltransferase, chemotaxis proteins 
RK51_RS15290	SM00260	Two component signalling adaptor domain
RK51_RS15290	SM00448	cheY-homologous receiver domain
RK51_RS15295	SM00858	RK51_RS15295
RK51_RS15385	SM01081	Putative carbohydrate binding domain
RK51_RS15415	SM00463	Small MutS-related domain
RK51_RS15420	SM00363	S4 RNA-binding domain
RK51_RS15455	SM00937	RK51_RS15455
RK51_RS15475	SM01400	RK51_RS15475
RK51_RS15600	SM00729	Elongator protein 3, MiaB family, Radical SAM
RK51_RS15615	SM00116	Domain in cystathionine beta-synthase and other proteins.
RK51_RS15615	SM01091	Transporter associated domain
RK51_RS15670	SM00936	Penicillin-binding protein 5, C-terminal domain 
RK51_RS15685	SM00729	Elongator protein 3, MiaB family, Radical SAM
RK51_RS15700	SM00862	Transcriptional regulatory protein, C terminal
RK51_RS15710	SM00642	Alpha-amylase domain
RK51_RS15720	SM00354	helix_turn _helix lactose operon repressor
RK51_RS15735	SM00382	ATPases associated with a variety of cellular activities
RK51_RS15735	SM00930	RK51_RS15735
RK51_RS15765	SM00028	Tetratricopeptide repeats
RK51_RS15770	SM00267	diguanylate cyclase
RK51_RS15780	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
RK51_RS15780	SM00475	5'-3' exonuclease
RK51_RS15785	SM00477	DNA/RNA non-specific endonuclease
RK51_RS15785	SM00892	DNA/RNA non-specific endonuclease
RK51_RS15810	SM00981	RK51_RS15810
RK51_RS15835	SM00861	Transketolase, pyrimidine binding domain
RK51_RS15885	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
RK51_RS15935	SM01211	RK51_RS15935
RK51_RS15940	SM00062	Bacterial periplasmic substrate-binding proteins
RK51_RS15995	SM00271	DnaJ molecular chaperone homology domain
RK51_RS16145	SM00495	Chitin-binding domain type 3
RK51_RS16160	SM00116	Domain in cystathionine beta-synthase and other proteins.
RK51_RS16160	SM01240	RK51_RS16160
RK51_RS16180	SM00382	ATPases associated with a variety of cellular activities
RK51_RS16185	SM00564	beta-propeller repeat
RK51_RS16205	SM00530	Helix-turn-helix XRE-family like proteins 
RK51_RS16220	SM00562	RK51_RS16220
RK51_RS16245	SM00271	DnaJ molecular chaperone homology domain
RK51_RS16295	SM01323	RK51_RS16295
RK51_RS16310	SM00020	Trypsin-like serine protease
RK51_RS16320	SM00116	Domain in cystathionine beta-synthase and other proteins.
RK51_RS16370	SM00382	ATPases associated with a variety of cellular activities
RK51_RS16400	SM00091	PAS domain
RK51_RS16400	SM00387	Histidine kinase-like ATPases
RK51_RS16400	SM00388	His Kinase A (phosphoacceptor) domain
RK51_RS16405	SM00448	cheY-homologous receiver domain
RK51_RS16405	SM00862	Transcriptional regulatory protein, C terminal
RK51_RS16485	SM00382	ATPases associated with a variety of cellular activities
RK51_RS16485	SM01086	C-terminal, D2-small domain, of ClpB protein
RK51_RS16495	SM00363	S4 RNA-binding domain
RK51_RS16505	SM00062	Bacterial periplasmic substrate-binding proteins
RK51_RS16515	SM00830	Chorismate mutase type II
RK51_RS16535	SM00382	ATPases associated with a variety of cellular activities
RK51_RS16555	SM00830	Chorismate mutase type II
RK51_RS16600	SM00448	cheY-homologous receiver domain
RK51_RS16600	SM00850	LytTr DNA-binding domain
RK51_RS16625	SM00904	Riboflavin kinase
RK51_RS16645	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RK51_RS16665	SM01154	RK51_RS16665
RK51_RS16685	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
RK51_RS16700	SM00927	DNA mismatch repair enzyme MutH
RK51_RS16720	SM00382	ATPases associated with a variety of cellular activities
RK51_RS16765	SM00487	DEAD-like helicases superfamily
RK51_RS16765	SM00490	helicase superfamily c-terminal domain
RK51_RS16790	SM00986	Uracil DNA glycosylase superfamily
RK51_RS16790	SM00987	UreE urease accessory protein, C-terminal domain 
RK51_RS16800	SM00518	AP endonuclease family 2
RK51_RS16845	SM00448	cheY-homologous receiver domain
RK51_RS16845	SM00862	Transcriptional regulatory protein, C terminal
RK51_RS16855	SM00073	Histidine Phosphotransfer domain
RK51_RS16855	SM00091	PAS domain
RK51_RS16855	SM00387	Histidine kinase-like ATPases
RK51_RS16855	SM00388	His Kinase A (phosphoacceptor) domain
RK51_RS16855	SM00448	cheY-homologous receiver domain
RK51_RS16860	SM00091	PAS domain
RK51_RS16860	SM00267	diguanylate cyclase
RK51_RS16865	SM00729	Elongator protein 3, MiaB family, Radical SAM
RK51_RS16900	SM00382	ATPases associated with a variety of cellular activities
RK51_RS16950	SM00487	DEAD-like helicases superfamily
RK51_RS16960	SM00530	Helix-turn-helix XRE-family like proteins 
RK51_RS17060	SM00052	Putative diguanylate phosphodiesterase
RK51_RS17090	SM00246	Wiskott Aldrich syndrome homology region 2
RK51_RS17200	SM00862	Transcriptional regulatory protein, C terminal
RK51_RS17235	SM00382	ATPases associated with a variety of cellular activities
RK51_RS17265	SM00862	Transcriptional regulatory protein, C terminal
RK51_RS17310	SM01276	RK51_RS17310
RK51_RS17315	SM00528	Domain in histone-like proteins of HNS family
RK51_RS17335	SM00342	helix_turn_helix, arabinose operon control protein
RK51_RS17340	SM00382	ATPases associated with a variety of cellular activities
RK51_RS17345	SM00382	ATPases associated with a variety of cellular activities
RK51_RS17385	SM00988	UreE urease accessory protein, N-terminal domain
RK51_RS17420	SM00635	Bacterial Ig-like domain 2
RK51_RS17505	SM00822	RK51_RS17505
RK51_RS17555	SM00936	Penicillin-binding protein 5, C-terminal domain 
RK51_RS17570	SM00020	Trypsin-like serine protease
RK51_RS17600	SM00357	Cold shock protein domain
RK51_RS17620	SM00347	helix_turn_helix multiple antibiotic resistance protein
RK51_RS17665	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_RS17665	SM00387	Histidine kinase-like ATPases
RK51_RS17665	SM00388	His Kinase A (phosphoacceptor) domain
RK51_RS17670	SM00448	cheY-homologous receiver domain
RK51_RS17670	SM00862	Transcriptional regulatory protein, C terminal
RK51_RS17685	SM01065	Starch binding domain
RK51_RS17725	SM00563	Phosphate acyltransferases
RK51_RS17735	SM00530	Helix-turn-helix XRE-family like proteins 
RK51_RS17740	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RK51_RS17765	SM00924	MgtE intracellular N domain
RK51_RS17780	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RK51_RS17795	SM00344	helix_turn_helix ASNC type
RK51_RS17815	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
RK51_RS17820	SM00387	Histidine kinase-like ATPases
RK51_RS17820	SM00388	His Kinase A (phosphoacceptor) domain
RK51_RS17820	SM00448	cheY-homologous receiver domain
RK51_RS17855	SM00465	GIY-YIG type nucleases (URI domain)
RK51_RS17865	SM00387	Histidine kinase-like ATPases
RK51_RS17865	SM00388	His Kinase A (phosphoacceptor) domain
RK51_RS17865	SM00448	cheY-homologous receiver domain
RK51_RS17870	SM00347	helix_turn_helix multiple antibiotic resistance protein
RK51_RS17895	SM00344	helix_turn_helix ASNC type
RK51_RS17945	SM00822	RK51_RS17945
RK51_RS17980	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
RK51_RS17995	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_RS17995	SM00387	Histidine kinase-like ATPases
RK51_RS18000	SM00421	helix_turn_helix, Lux Regulon
RK51_RS18000	SM00448	cheY-homologous receiver domain
RK51_RS18035	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_RS18075	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_RS18080	SM00861	Transketolase, pyrimidine binding domain
RK51_RS18105	SM00636	RK51_RS18105
RK51_RS18110	SM00052	Putative diguanylate phosphodiesterase
RK51_RS18110	SM00267	diguanylate cyclase
RK51_RS18115	SM00450	Rhodanese Homology Domain
RK51_RS18140	SM00852	Probable molybdopterin binding domain
RK51_RS18180	SM00448	cheY-homologous receiver domain
RK51_RS18195	SM01240	RK51_RS18195
RK51_RS18205	SM00893	Electron transfer flavoprotein domain
RK51_RS18210	SM00893	Electron transfer flavoprotein domain
RK51_RS18225	SM00382	ATPases associated with a variety of cellular activities
RK51_RS18250	SM00382	ATPases associated with a variety of cellular activities
RK51_RS18290	SM00422	helix_turn_helix, mercury resistance
RK51_RS18320	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RK51_RS18325	SM01266	RK51_RS18325
RK51_RS18350	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RK51_RS18350	SM00091	PAS domain
RK51_RS18350	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_RS18350	SM00387	Histidine kinase-like ATPases
RK51_RS18350	SM00388	His Kinase A (phosphoacceptor) domain
RK51_RS18350	SM00448	cheY-homologous receiver domain
RK51_RS18360	SM00878	Biotin carboxylase C-terminal domain
RK51_RS18380	SM00422	helix_turn_helix, mercury resistance
RK51_RS18415	SM00822	RK51_RS18415
RK51_RS18425	SM00028	Tetratricopeptide repeats
RK51_RS18425	SM00267	diguanylate cyclase
RK51_RS18455	SM00382	ATPases associated with a variety of cellular activities
RK51_RS18470	SM00244	prohibitin homologues
RK51_RS18485	SM00052	Putative diguanylate phosphodiesterase
RK51_RS18485	SM00091	PAS domain
RK51_RS18485	SM00267	diguanylate cyclase
RK51_RS18505	SM00387	Histidine kinase-like ATPases
RK51_RS18505	SM00388	His Kinase A (phosphoacceptor) domain
RK51_RS18505	SM00448	cheY-homologous receiver domain
RK51_RS18570	SM00052	Putative diguanylate phosphodiesterase
RK51_RS18570	SM00267	diguanylate cyclase
RK51_RS18580	SM00382	ATPases associated with a variety of cellular activities
RK51_RS18600	SM00354	helix_turn _helix lactose operon repressor
RK51_RS18635	SM00448	cheY-homologous receiver domain
RK51_RS18635	SM00862	Transcriptional regulatory protein, C terminal
RK51_RS18640	SM00388	His Kinase A (phosphoacceptor) domain
RK51_RS18645	SM00871	Bacterial transcription activator, effector binding domain
RK51_RS18650	SM00098	Alkaline phosphatase homologues
RK51_RS18670	SM00028	Tetratricopeptide repeats
RK51_RS18670	SM00267	diguanylate cyclase
RK51_RS18690	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
RK51_RS18715	SM01012	RK51_RS18715
RK51_RS18735	SM00382	ATPases associated with a variety of cellular activities
RK51_RS18790	SM00448	cheY-homologous receiver domain
RK51_RS18795	SM00220	Serine/Threonine protein kinases, catalytic domain
RK51_RS18805	SM00240	Forkhead associated domain
RK51_RS18835	SM00331	Sigma factor PP2C-like phosphatases
RK51_RS18835	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
RK51_RS18880	SM00382	ATPases associated with a variety of cellular activities
RK51_RS18880	SM01086	C-terminal, D2-small domain, of ClpB protein
RK51_RS18935	SM00342	helix_turn_helix, arabinose operon control protein
RK51_RS18975	SM00382	ATPases associated with a variety of cellular activities
RK51_RS19025	SM01005	Alanine racemase, C-terminal domain
RK51_RS19030	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_RS19030	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_RS19045	SM00642	Alpha-amylase domain
RK51_RS19065	SM00880	RK51_RS19065
RK51_RS19195	SM00342	helix_turn_helix, arabinose operon control protein
RK51_RS19240	SM00387	Histidine kinase-like ATPases
RK51_RS19245	SM00421	helix_turn_helix, Lux Regulon
RK51_RS19245	SM00448	cheY-homologous receiver domain
RK51_RS19275	SM00450	Rhodanese Homology Domain
RK51_RS19285	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RK51_RS19335	SM00342	helix_turn_helix, arabinose operon control protein
RK51_RS19375	SM00382	ATPases associated with a variety of cellular activities
RK51_RS19385	SM00267	diguanylate cyclase
RK51_RS19385	SM00448	cheY-homologous receiver domain
RK51_RS19395	SM00267	diguanylate cyclase
RK51_RS19410	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
RK51_RS19410	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
RK51_RS19420	SM00387	Histidine kinase-like ATPases
RK51_RS19420	SM00388	His Kinase A (phosphoacceptor) domain
RK51_RS19425	SM00448	cheY-homologous receiver domain
RK51_RS19425	SM00862	Transcriptional regulatory protein, C terminal
RK51_RS19480	SM00881	CoA binding domain
RK51_RS19505	SM00091	PAS domain
RK51_RS19505	SM00267	diguanylate cyclase
RK51_RS19505	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_RS19515	SM00796	Allophanate hydrolase subunit 1
RK51_RS19520	SM00797	Allophanate hydrolase subunit 2
RK51_RS19535	SM00382	ATPases associated with a variety of cellular activities
RK51_RS19550	SM00052	Putative diguanylate phosphodiesterase
RK51_RS19550	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
RK51_RS19550	SM00267	diguanylate cyclase
RK51_RS19560	SM00271	DnaJ molecular chaperone homology domain
RK51_RS19620	SM01321	RK51_RS19620
RK51_RS19625	SM00782	PhnA Zinc-Ribbon
RK51_RS19660	SM00116	Domain in cystathionine beta-synthase and other proteins.
RK51_RS19665	SM00867	YceI-like domain 
RK51_RS19685	SM00052	Putative diguanylate phosphodiesterase
RK51_RS19690	SM00487	DEAD-like helicases superfamily
RK51_RS19690	SM00490	helicase superfamily c-terminal domain
RK51_RS19705	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_RS19725	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RK51_RS19760	SM00495	Chitin-binding domain type 3
RK51_RS19760	SM00636	RK51_RS19760
RK51_RS19770	SM00342	helix_turn_helix, arabinose operon control protein
RK51_RS19785	SM00448	cheY-homologous receiver domain
RK51_RS19790	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_RS19790	SM00387	Histidine kinase-like ATPases
RK51_RS19790	SM00388	His Kinase A (phosphoacceptor) domain
RK51_RS19810	SM00382	ATPases associated with a variety of cellular activities
RK51_RS19820	SM00062	Bacterial periplasmic substrate-binding proteins
RK51_RS19820	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
RK51_RS19830	SM00052	Putative diguanylate phosphodiesterase
RK51_RS19850	SM00354	helix_turn _helix lactose operon repressor
RK51_RS19900	SM00530	Helix-turn-helix XRE-family like proteins 
RK51_RS19945	SM00479	RK51_RS19945
RK51_RS19950	SM00382	ATPases associated with a variety of cellular activities
RK51_RS19985	SM00422	helix_turn_helix, mercury resistance
RK51_RS20020	SM00924	MgtE intracellular N domain
RK51_RS20060	SM00953	RK51_RS20060
RK51_RS20080	SM00704	CDGSH-type zinc finger. Function unknown.
RK51_RS20090	SM00448	cheY-homologous receiver domain
RK51_RS20095	SM00387	Histidine kinase-like ATPases
RK51_RS20145	SM00014	Acid phosphatase homologues
RK51_RS20180	SM00260	Two component signalling adaptor domain
RK51_RS20180	SM00448	cheY-homologous receiver domain
RK51_RS20195	SM00448	cheY-homologous receiver domain
RK51_RS20205	SM00421	helix_turn_helix, Lux Regulon
RK51_RS20205	SM00448	cheY-homologous receiver domain
RK51_RS20215	SM00267	diguanylate cyclase
RK51_RS20220	SM00421	helix_turn_helix, Lux Regulon
RK51_RS20220	SM00448	cheY-homologous receiver domain
RK51_RS20225	SM00052	Putative diguanylate phosphodiesterase
RK51_RS20225	SM00448	cheY-homologous receiver domain
RK51_RS20230	SM00062	Bacterial periplasmic substrate-binding proteins
RK51_RS20230	SM00387	Histidine kinase-like ATPases
RK51_RS20230	SM00388	His Kinase A (phosphoacceptor) domain
RK51_RS20230	SM00448	cheY-homologous receiver domain
RK51_RS20260	SM00327	von Willebrand factor (vWF) type A domain
RK51_RS20330	SM00342	helix_turn_helix, arabinose operon control protein
RK51_RS20345	SM00052	Putative diguanylate phosphodiesterase
RK51_RS20360	SM00387	Histidine kinase-like ATPases
RK51_RS20360	SM00448	cheY-homologous receiver domain
RK51_RS20410	SM00990	RK51_RS20410
RK51_RS20415	SM00028	Tetratricopeptide repeats
RK51_RS20445	SM00046	Diacylglycerol kinase catalytic domain (presumed)
RK51_RS20465	SM00327	von Willebrand factor (vWF) type A domain
RK51_RS20470	SM00327	von Willebrand factor (vWF) type A domain
RK51_RS20505	SM00028	Tetratricopeptide repeats
RK51_RS20520	SM00862	Transcriptional regulatory protein, C terminal
RK51_RS20535	SM00073	Histidine Phosphotransfer domain
RK51_RS20535	SM00387	Histidine kinase-like ATPases
RK51_RS20535	SM00388	His Kinase A (phosphoacceptor) domain
RK51_RS20535	SM00448	cheY-homologous receiver domain
RK51_RS20545	SM00851	MGS-like domain
RK51_RS20595	SM00342	helix_turn_helix, arabinose operon control protein
RK51_RS20605	SM00422	helix_turn_helix, mercury resistance
RK51_RS20610	SM00382	ATPases associated with a variety of cellular activities
RK51_RS20675	SM00861	Transketolase, pyrimidine binding domain
RK51_RS20715	SM00062	Bacterial periplasmic substrate-binding proteins
RK51_RS20715	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
RK51_RS20720	SM00382	ATPases associated with a variety of cellular activities
RK51_RS20760	SM00822	RK51_RS20760
RK51_RS20795	SM00422	helix_turn_helix, mercury resistance
RK51_RS20830	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RK51_RS20830	SM00091	PAS domain
RK51_RS20830	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_RS20845	SM00052	Putative diguanylate phosphodiesterase
RK51_RS20845	SM00267	diguanylate cyclase
RK51_RS20850	SM00487	DEAD-like helicases superfamily
RK51_RS20850	SM00490	helicase superfamily c-terminal domain
RK51_RS20855	SM00357	Cold shock protein domain
RK51_RS20855	SM00955	RK51_RS20855
RK51_RS20860	SM00342	helix_turn_helix, arabinose operon control protein
RK51_RS20915	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_RS20920	SM00382	ATPases associated with a variety of cellular activities
RK51_RS20925	SM00052	Putative diguanylate phosphodiesterase
RK51_RS20945	SM00487	DEAD-like helicases superfamily
RK51_RS20945	SM00490	helicase superfamily c-terminal domain
RK51_RS20950	SM00833	Cobalamin synthesis protein cobW C-terminal domain
RK51_RS20980	SM00487	DEAD-like helicases superfamily
RK51_RS20980	SM00490	helicase superfamily c-terminal domain
RK51_RS21085	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_RS21085	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_RS21095	SM00382	ATPases associated with a variety of cellular activities
RK51_RS21115	SM00062	Bacterial periplasmic substrate-binding proteins
RK51_RS21115	SM00267	diguanylate cyclase
RK51_RS21125	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RK51_RS21125	SM00091	PAS domain
RK51_RS21125	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_RS21135	SM00357	Cold shock protein domain
RK51_RS21140	SM01322	RK51_RS21140
RK51_RS21235	SM00342	helix_turn_helix, arabinose operon control protein
RK51_RS21300	SM00052	Putative diguanylate phosphodiesterase
RK51_RS21300	SM00267	diguanylate cyclase
RK51_RS21335	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_RS21335	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_RS21355	SM00530	Helix-turn-helix XRE-family like proteins 
RK51_RS21365	SM00481	DNA polymerase alpha chain like domain
RK51_RS21405	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RK51_RS21415	SM00342	helix_turn_helix, arabinose operon control protein
RK51_RS21440	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_RS21440	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_RS21450	SM00382	ATPases associated with a variety of cellular activities
RK51_RS21470	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
RK51_RS21515	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
RK51_RS21515	SM00267	diguanylate cyclase
RK51_RS21560	SM00382	ATPases associated with a variety of cellular activities
RK51_RS21585	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RK51_RS21590	SM00642	Alpha-amylase domain
RK51_RS21685	SM00260	Two component signalling adaptor domain
RK51_RS21685	SM00448	cheY-homologous receiver domain
RK51_RS21705	SM00729	Elongator protein 3, MiaB family, Radical SAM
RK51_RS21735	SM00382	ATPases associated with a variety of cellular activities
RK51_RS21825	SM00342	helix_turn_helix, arabinose operon control protein
RK51_RS21845	SM00342	helix_turn_helix, arabinose operon control protein
RK51_RS21845	SM00871	Bacterial transcription activator, effector binding domain
RK51_RS21895	SM00487	DEAD-like helicases superfamily
RK51_RS21895	SM00490	helicase superfamily c-terminal domain
RK51_RS21940	SM00342	helix_turn_helix, arabinose operon control protein
RK51_RS21975	SM00788	Adenylosuccinate synthetase
RK51_RS21980	SM00870	RK51_RS21980
RK51_RS22005	SM00421	helix_turn_helix, Lux Regulon
RK51_RS22050	SM00267	diguanylate cyclase
RK51_RS22055	SM00530	Helix-turn-helix XRE-family like proteins 
RK51_RS22060	SM00421	helix_turn_helix, Lux Regulon
RK51_RS22075	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RK51_RS22075	SM00866	RK51_RS22075
RK51_RS22100	SM00382	ATPases associated with a variety of cellular activities
RK51_RS22155	SM00155	Phospholipase D. Active site motifs.
RK51_RS22165	SM01022	RK51_RS22165
RK51_RS22175	SM00028	Tetratricopeptide repeats
RK51_RS22185	SM00422	helix_turn_helix, mercury resistance
RK51_RS22215	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
RK51_RS22225	SM00838	Elongation factor G C-terminus
RK51_RS22225	SM00889	Elongation factor G, domain IV
RK51_RS22325	SM00248	ankyrin repeats
RK51_RS22330	SM01060	RK51_RS22330
RK51_RS22340	SM00420	helix_turn_helix, Deoxyribose operon repressor
RK51_RS22340	SM01134	RK51_RS22340
RK51_RS22420	SM00883	Chaperonin 10 Kd subunit
RK51_RS22430	SM00450	Rhodanese Homology Domain
RK51_RS22455	SM01240	RK51_RS22455
RK51_RS22530	SM00858	RK51_RS22530
RK51_RS22615	SM00631	RK51_RS22615
RK51_RS22645	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RK51_RS22645	SM00866	RK51_RS22645
RK51_RS22655	SM00382	ATPases associated with a variety of cellular activities
RK51_RS22685	SM00354	helix_turn _helix lactose operon repressor
RK51_RS22725	SM00382	ATPases associated with a variety of cellular activities
RK51_RS22740	SM01057	Eukaryotic-type carbonic anhydrase
RK51_RS22800	SM01266	RK51_RS22800
RK51_RS22835	SM00267	diguanylate cyclase
RK51_RS22845	SM00530	Helix-turn-helix XRE-family like proteins 
RK51_RS22850	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_RS22855	SM00267	diguanylate cyclase
RK51_RS22855	SM01079	RK51_RS22855
RK51_RS22930	SM00267	diguanylate cyclase
RK51_RS22935	SM00382	ATPases associated with a variety of cellular activities
RK51_RS22935	SM00448	cheY-homologous receiver domain
RK51_RS22940	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RK51_RS22940	SM00387	Histidine kinase-like ATPases
RK51_RS22965	SM00342	helix_turn_helix, arabinose operon control protein
RK51_RS22990	SM00849	Metallo-beta-lactamase superfamily
RK51_RS23030	SM00382	ATPases associated with a variety of cellular activities
RK51_RS23070	SM00028	Tetratricopeptide repeats
RK51_RS23105	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_RS23105	SM00387	Histidine kinase-like ATPases
RK51_RS23105	SM00388	His Kinase A (phosphoacceptor) domain
RK51_RS23110	SM00448	cheY-homologous receiver domain
RK51_RS23110	SM00862	Transcriptional regulatory protein, C terminal
RK51_RS23215	SM00382	ATPases associated with a variety of cellular activities
RK51_RS23245	SM00014	Acid phosphatase homologues
RK51_RS23265	SM00822	RK51_RS23265
RK51_RS23300	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RK51_RS23375	SM00506	Appr-1"-p processing enzyme
RK51_RS23430	SM00495	Chitin-binding domain type 3
RK51_RS23435	SM00344	helix_turn_helix ASNC type
RK51_RS23510	SM00346	helix_turn_helix isocitrate lyase regulation
RK51_RS23515	SM00116	Domain in cystathionine beta-synthase and other proteins.
RK51_RS23520	SM00479	RK51_RS23520
RK51_RS23535	SM00829	Enoylreductase
RK51_RS23550	SM00267	diguanylate cyclase
RK51_RS23570	SM00849	Metallo-beta-lactamase superfamily
RK51_RS23595	SM00267	diguanylate cyclase
RK51_RS23615	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
RK51_RS23615	SM00495	Chitin-binding domain type 3
RK51_RS23615	SM00636	RK51_RS23615
RK51_RS23660	SM00342	helix_turn_helix, arabinose operon control protein
RK51_RS23660	SM01009	AlkA N-terminal domain
RK51_RS23720	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RK51_RS23725	SM00382	ATPases associated with a variety of cellular activities
RK51_RS23765	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_RS23765	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_RS23765	SM01049	RK51_RS23765
RK51_RS23780	SM00448	cheY-homologous receiver domain
RK51_RS23780	SM00850	LytTr DNA-binding domain
RK51_RS23785	SM00387	Histidine kinase-like ATPases
RK51_RS23805	SM00382	ATPases associated with a variety of cellular activities
RK51_RS23835	SM00387	Histidine kinase-like ATPases
RK51_RS23835	SM00388	His Kinase A (phosphoacceptor) domain
RK51_RS23835	SM00448	cheY-homologous receiver domain
RK51_RS23860	SM00382	ATPases associated with a variety of cellular activities
RK51_RS23865	SM00382	ATPases associated with a variety of cellular activities
RK51_RS23890	SM00470	ParB-like nuclease domain
RK51_RS23965	SM00382	ATPases associated with a variety of cellular activities
RK51_RS23970	SM00052	Putative diguanylate phosphodiesterase
RK51_RS23970	SM00267	diguanylate cyclase
RK51_RS23985	SM00448	cheY-homologous receiver domain
RK51_RS23990	SM00387	Histidine kinase-like ATPases
RK51_RS23990	SM00388	His Kinase A (phosphoacceptor) domain
RK51_RS24000	SM00421	helix_turn_helix, Lux Regulon
RK51_RS24010	SM00342	helix_turn_helix, arabinose operon control protein
RK51_RS24035	SM00360	RNA recognition motif
RK51_RS24060	SM00344	helix_turn_helix ASNC type
RK51_RS24070	SM00382	ATPases associated with a variety of cellular activities
RK51_RS24080	SM00342	helix_turn_helix, arabinose operon control protein
RK51_RS24140	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RK51_RS24140	SM00895	RK51_RS24140
RK51_RS24150	SM00487	DEAD-like helicases superfamily
RK51_RS24150	SM00490	helicase superfamily c-terminal domain
RK51_RS24160	SM00342	helix_turn_helix, arabinose operon control protein
RK51_RS24165	SM00829	Enoylreductase
RK51_RS24180	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_RS24240	SM00347	helix_turn_helix multiple antibiotic resistance protein
RK51_RS24260	SM00342	helix_turn_helix, arabinose operon control protein
RK51_RS24275	SM01007	Class II Aldolase and Adducin N-terminal domain
RK51_RS24290	SM00382	ATPases associated with a variety of cellular activities
RK51_RS24320	SM00448	cheY-homologous receiver domain
RK51_RS24320	SM00862	Transcriptional regulatory protein, C terminal
RK51_RS24325	SM00387	Histidine kinase-like ATPases
RK51_RS24385	SM00382	ATPases associated with a variety of cellular activities
RK51_RS24390	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_RS24390	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_RS24420	SM00857	Resolvase, N terminal domain
RK51_RS24425	SM00642	Alpha-amylase domain
RK51_RS24445	SM00642	Alpha-amylase domain
RK51_RS24460	SM00642	Alpha-amylase domain
RK51_RS24465	SM00671	Sel1-like repeats.
RK51_RS24485	SM00966	SpoVT / AbrB like domain 
RK51_RS24535	SM00421	helix_turn_helix, Lux Regulon
RK51_RS24560	SM00642	Alpha-amylase domain
RK51_RS24570	SM00642	Alpha-amylase domain
RK51_RS24635	SM00226	Low molecular weight phosphatase family
RK51_RS24665	SM00450	Rhodanese Homology Domain
RK51_RS24680	SM00936	Penicillin-binding protein 5, C-terminal domain 
RK51_RS24685	SM00642	Alpha-amylase domain
RK51_RS24690	SM00342	helix_turn_helix, arabinose operon control protein
RK51_RS24835	SM00422	helix_turn_helix, mercury resistance
RK51_RS24960	SM00382	ATPases associated with a variety of cellular activities
RK51_RS24985	SM00382	ATPases associated with a variety of cellular activities
RK51_RS24995	SM00020	Trypsin-like serine protease
RK51_RS25015	SM00481	DNA polymerase alpha chain like domain
RK51_RS25070	SM00448	cheY-homologous receiver domain
RK51_RS25070	SM00862	Transcriptional regulatory protein, C terminal
RK51_RS25075	SM00388	His Kinase A (phosphoacceptor) domain
RK51_RS25090	SM00062	Bacterial periplasmic substrate-binding proteins
RK51_RS25095	SM00052	Putative diguanylate phosphodiesterase
RK51_RS25095	SM00267	diguanylate cyclase
RK51_RS25105	SM00829	Enoylreductase
RK51_RS25110	SM00972	Spore Coat Protein U domain
RK51_RS25130	SM00972	Spore Coat Protein U domain
RK51_RS25135	SM01057	Eukaryotic-type carbonic anhydrase
RK51_RS25170	SM00382	ATPases associated with a variety of cellular activities
RK51_RS25185	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_RS25185	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_RS25235	SM00382	ATPases associated with a variety of cellular activities
RK51_RS25255	SM00267	diguanylate cyclase
RK51_RS25260	SM00028	Tetratricopeptide repeats
RK51_RS25285	SM00422	helix_turn_helix, mercury resistance
RK51_RS25295	SM00257	Lysin motif
RK51_RS25305	SM00487	DEAD-like helicases superfamily
RK51_RS25305	SM00490	helicase superfamily c-terminal domain
RK51_RS25335	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_RS25335	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_RS25355	SM00382	ATPases associated with a variety of cellular activities
RK51_RS25360	SM00267	diguanylate cyclase
RK51_RS25370	SM00327	von Willebrand factor (vWF) type A domain
RK51_RS25375	SM00327	von Willebrand factor (vWF) type A domain
RK51_RS25400	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_RS25400	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_RS25410	SM00421	helix_turn_helix, Lux Regulon
RK51_RS25415	SM00421	helix_turn_helix, Lux Regulon
RK51_RS25425	SM00382	ATPases associated with a variety of cellular activities
RK51_RS25465	SM00382	ATPases associated with a variety of cellular activities
RK51_RS25475	SM00382	ATPases associated with a variety of cellular activities
RK51_RS25480	SM00387	Histidine kinase-like ATPases
RK51_RS25480	SM00388	His Kinase A (phosphoacceptor) domain
RK51_RS25485	SM00448	cheY-homologous receiver domain
RK51_RS25485	SM00862	Transcriptional regulatory protein, C terminal
RK51_RS25500	SM00052	Putative diguanylate phosphodiesterase
RK51_RS25530	SM00342	helix_turn_helix, arabinose operon control protein
RK51_RS25555	SM01060	RK51_RS25555
RK51_RS25565	SM00829	Enoylreductase
RK51_RS25575	SM01022	RK51_RS25575
